Citrus Sinensis ID: 048419

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650---
Protein Sequence
MVVVHADTTSFLYNGFLHANLSLEGAAYISTSGILTVTNKSEGLIGHALYPNPLRFKTSNKSVAIDFRTNFVFSILPKYPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTKFSTRMLAVEFDIIQNTELIDINDNHVGIDISSLISSASEPASYYSGNNHRIPILLRSGDPIQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLITASHNVHGWSISIGGKAQDLNPMKVPTLEKRSHEVVQRRGFSVGITLAGMAFLILIIAGAIHVLQRIKYADKMLEDWEIQCGARRFKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLGDSSLPPLPPDIHLKDTRNIMGFSDFPNDSDFFNSKLMSSQSNSFTSI
Secondary Structure (PSIPRED)
cEEEcccccEEEEcccccccEEEEccEEEccccEEEccccccccEEEEEcccccccccccccccccccEEEEEEEEccccccccccEEEEEEccccccccccccccccccccccccccccccEEEEEEEEccccccccccccEEEEEcccEEEEcccccccccccccEEEEEEcccccEEEEEEEccccEEEEEEEEEcccccccccEEEEEEccccccEEEEEEEEccccccccccEEEEcccccccccccccccccccccccccccccEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHcccccccHHHHccccccEEcHHHHHHHHccccccccccccccccEEEEEEcccccEEEEEEEcccccccHHHHHHHHHHHHcccccccccEEEEEEcccEEEEEEEcccccccHHHcccccccccccccHHHHHHHHHHHHHHHHHcccccccEEEEEccccccccccccccccccccccccccccccccccEEEEcccccccccccccccccccccEEEHHHHHHHHHccccccccccccccccHHHHHHHHHccccccHHcccccccccHHHHHHHHHHHHccccccccccccHHHHHHHHccccccccccccccccccccccccccccccccccccEEEEccccccccc
Secondary Structure Prediction (SSPRO)
cEEEEccccEEEEcccccccEEEccEEEEccccEEEEEcccccccccEccccccEEEccccccEEEEEEEEEEEEEcccccccccEEEEEEEcccccccccHHHHcEEEEcccccccccccEEEEEEEEccccccccccccccEEEEEccccccccccccEEccccccEEEEEEccccEEEEEEcccccEEEEEEEcccccccccccEEEEEEccHHHccccEEEEEEcccccEccEEEEEEEEEccccccccccHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHcccccccccccccccEEEEcEccccccEEEEEEEccccHccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEccccccHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccEEcccccHHHEEEcccccEEEccHHHcEEccccccccccEEEEcHHHccHHHHHcccccccHHHHHHHHHHHHHHccccccccccccccEEEHHHHHHHHHcccHHHHcccccccccHHHHHHHHHHccccccccccccccHHHHHHHHcccccccccccccHHHHHHHHccccccccccccccccccccccccEccc
Coil and Loop (DISEMBL)
mvvvhadttsflyngflhanlslegaayistsgiltvtnkseglighalypnplrfktsnksvaIDFRTNFVFsilpkypdlggqgLAFIIIStnrpenclanqflglpnitmssstKFSTRMLAVEFDIiqntelidindnhvgidisslissasepasyysgnnhripillrsgdpiqawvDYSSQEMLINvsicplgvpkpyrplislpidlssVIDEYMYTGFSASTGLITashnvhgwsisiggkaqdlnpmkvptlekrshevvqrrgfsVGITLAGMAFLILIIAGAIHVLQRIKYADKMLEDWEIQCGARRFKYAELASvtkgfgeqnlvgsggfgrvyrglmpslGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVydyvpngsldkllfdkdHKLRKLLTWDQRYKILIGIAQSLLYLHEEcnqrvvhrdvkpsnillDTYLnaklgdfglakiyehganpqtthivgtlgylapeltrtgkattstdvySYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLglfcsapnpvyrpdmRRVVEFLlgdsslpplppdihlkdtrnimgfsdfpndsdffnsklmssqsnsftsi
Flexible Loop (DISEMBL)
MVVVHADTTSFLYNGFLHANLSLEGAAYISTSGILTVTNKSEGLIGHALYPNPLRFKTSNKSVAIDFRTNFVFSILPKYPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTKFSTRMLAVEFDIIQNTELIDINDNHVGIDISSLISSASEPASYYSGNNHRIPILLRSGDPIQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLITASHNVHGWSISIGGKAQDLNPMKVPtlekrshevvqRRGFSVGITLAGMAFLILIIAGAIHVLQRIKYADKMLEDWEIQCGARRFKYAELASvtkgfgeqnlvgSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTrtgkattstdvysYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLGDSSLPPLPPDIHLKDTRNIMGFSDFPNDSdffnsklmssqsnsftsi
Low Complexity Region (SEG)
MVVVHADTTSFLYNGFLHANLSLEGAAYISTSGILTVTNKSEGLIGHALYPNPLRFKTSNKSVAIDFRTNFVFSILPKYPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTKFSTRMLAVEFDIIQNTELIDINDNHVGIDisslissasepasYYSGNNHRIPILLRSGDPIQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLITASHNVHGWSISIGGKAQDLNPMKVPTLEKRSHEVVQRRGFSVGITLAGMAFLILIIAGAIHVLQRIKYADKMLEDWEIQCGARRFKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSldkllfdkdhklrkllTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFllgdsslpplppdIHLKDTRNIMGfsdfpndsdffnsKLMSSQSNSFTSI
Disordered region (IsUnstruct)
**VVHADTTSFLYNGFLHANLSLEGAAYISTSGILTVTNKSEGLIGHALYPNPLRFKTSNKSVAIDFRTNFVFSILPKYPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTKFSTRMLAVEFDIIQNTELIDINDNHVGIDISSLISSASEPASYYSGNNHRIPILLRSGDPIQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLITASHNVHGWSISIGGKAQDLN***********HEVVQRRGFSVGITLAGMAFLILIIAGAIHVLQRIKYADKMLEDWEIQCGARRFKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLGDS*********HL*****IM***************************
Disordered Region (DISOPRED)
MV*VHADTTSFLYNGFLHANLSLEGAAYISTSGILTVTNKSEGLIGHALYPNPLRFKTSNKSVAIDFRTNFVFSILPKYPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTKFSTRMLAVEFDIIQNTELIDINDNHVGIDISSLISSASEPASYYSGNNHRIPILLRSGDPIQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLITASHNVHGWSISIGG**************************SVGITLAGMAFLILIIAGAIHVLQRIKYADKMLEDWEIQCGARRFKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGH*******EFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEP*KAAAELLLVDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLGDSSLPPLPPDIH***********************************
Disordered Region (DISEMBL)
MVVVHADTTSFLYNGFLHANLSLEGAAYISTSGILTVTNKSEGLIGHALYPNPLRFKTSNKSVAIDFRTNFVFSILPKYPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTKFSTRMLAVEFDIIQNTELIDINDNHVGIDISSLISSASEPASYYSGNNHRIPILLRSGDPIQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLITASHNVHGWSISIGGKAQDLNPMKVPTLEKRSHEVVQRRGFSVGITLAGMAFLILIIAGAIHVLQRIKYADKMLEDWEIQCGARRFKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLGDSSLPPLPPDIHLKDTRNIMGFSDFPNDSDFFNSKL***********
Disordered Region (DISPRO)
MVVVHADTTSFLYNGFLHANLSLEGAAYISTSGILTVTNKSEGLIGHALYPNPLRFKTSNKSVAIDFRTNFVFSILPKYPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTKFSTRMLAVEFDIIQNTELIDINDNHVGIDISSLISSASEPASYYSGNNHRIPILLRSGDPIQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLITASHNVHGWSISIGGKAQDLNPMKVPTLEKRSHEVVQRRGFSVGITLAGMAFLILIIAGAIHVLQRIKYADKMLEDWEIQCGARRFKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLGDSSLPPLPPDIHLKDTRNIMGF*************************
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MVVVHADTTSFLYNGFLHANLSLEGAAYISTSGILTVTNKSEGLIGHALYPNPLRFKTSNKSVAIDFRTNFVFSILPKYPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTKFSTRMLAVEFDIIQNTELIDINDNHVGIDISSLISSASEPASYYSGNNHRIPILLRSGDPIQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLITASHNVHGWSISIGGKAQDLNPMKVPTLEKRSHEVVQRRGFSVGITLAGMAFLILIIAGAIHVLQRIKYADKMLEDWEIQCGARRFKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLGDSSLPPLPPDIHLKDTRNIMGFSDFPNDSDFFNSKLMSSQSNSFTSI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	653	2.2.26 [Sep-21-2011]
Q9M2S4	684	L-type lectin-domain cont	yes	no	0.970	0.926	0.439	1e-158
Q9M345	677	L-type lectin-domain cont	no	no	0.955	0.921	0.457	1e-157
O81292	674	L-type lectin-domain cont	no	no	0.963	0.933	0.442	1e-150
Q9SZD5	669	L-type lectin-domain cont	no	no	0.914	0.892	0.431	1e-148
O81291	669	L-type lectin-domain cont	no	no	0.952	0.929	0.445	1e-147
O80939	675	L-type lectin-domain cont	no	no	0.924	0.894	0.449	1e-147
O04534	666	Putative L-type lectin-do	no	no	0.898	0.881	0.431	1e-141
Q9FIF1	674	Probable L-type lectin-do	no	no	0.897	0.869	0.431	1e-133
Q9FIF0	694	Putative L-type lectin-do	no	no	0.917	0.863	0.411	1e-133
Q9LSR9	657	L-type lectin-domain cont	no	no	0.901	0.896	0.435	1e-132

>sp|Q9M2S4|LRKS4_ARATH L-type lectin-domain containing receptor kinase S.4 OS=Arabidopsis thaliana GN=LECRKS4 PE=1 SV=1

 Score =  558 bits (1437), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 288/656 (43%), Positives = 424/656 (64%), Gaps = 22/656 (3%)

Query: 11  FLYNGFLHA--NLSLEGAAYISTSGILTVTNKSEGLIGHALYPNPLRFKTSNKSVAIDFR 68
           F + GF  A  NL+L G A I+ +G + +T +++ +IGHA Y  P+RFK    + A+ F 
Sbjct: 26  FSFIGFKKASPNLTLNGVAEIAPTGAIRLTTETQRVIGHAFYSLPIRFKPIGVNRALSFS 85

Query: 69  TNFVFSILPKYPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTKFSTRMLAVEF 128
           T+F  +++P++  LGG GLAF I  T      L +Q+LGL N   SS   FS+   AVEF
Sbjct: 86  TSFAIAMVPEFVTLGGHGLAFAITPTPDLRGSLPSQYLGLLN---SSRVNFSSHFFAVEF 142

Query: 129 DIIQNTELIDINDNHVGIDISSLISSASEPASYYSGNNHRIPILLRSGDPIQAWVDYSSQ 188
           D +++ E  DINDNHVGIDI+S+ SS S PA Y+  N+ +  + L  G  IQAW+DY S 
Sbjct: 143 DTVRDLEFEDINDNHVGIDINSMESSISTPAGYFLANSTKKELFLDGGRVIQAWIDYDSN 202

Query: 189 EMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLITASHNVHGWSISIG 248
           +  ++V + P    KP   L+S  +DLSSV+ + MY GFSASTGL+ +SH + GW+ ++ 
Sbjct: 203 KKRLDVKLSPFS-EKPKLSLLSYDVDLSSVLGDEMYVGFSASTGLLASSHYILGWNFNMS 261

Query: 249 GKAQDLNPMKVPTLEKR-SHEVVQRRGFSVGITL-AGMAFLILIIAGAIHVLQRIKYADK 306
           G+A  L+   +P +         +R+   +G++L   +    +++A ++ V++++K  D+
Sbjct: 262 GEAFSLSLPSLPRIPSSIKKRKKKRQSLILGVSLLCSLLIFAVLVAASLFVVRKVKDEDR 321

Query: 307 MLEDWEIQCGARRFKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN 366
            +E+WE+  G  RF Y EL   T GFG++ L+GSGGFG+VY+G +P     VA+KRI H 
Sbjct: 322 -VEEWELDFGPHRFSYRELKKATNGFGDKELLGSGGFGKVYKGKLPGSDEFVAVKRISHE 380

Query: 367 SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLR 426
           S+QG++EF++E+ S+G LRHRNLVQL GWCR++D+LLLVYD++PNGSLD  LFD++ ++ 
Sbjct: 381 SRQGVREFMSEVSSIGHLRHRNLVQLLGWCRRRDDLLLVYDFMPNGSLDMYLFDENPEV- 439

Query: 427 KLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE 486
            +LTW QR+KI+ G+A  LLYLHE   Q V+HRD+K +N+LLD+ +N ++GDFGLAK+YE
Sbjct: 440 -ILTWKQRFKIIKGVASGLLYLHEGWEQTVIHRDIKAANVLLDSEMNGRVGDFGLAKLYE 498

Query: 487 HGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELL 546
           HG++P  T +VGT GYLAPELT++GK TTSTDVY++G ++LEVACGRR IE      EL+
Sbjct: 499 HGSDPGATRVVGTFGYLAPELTKSGKLTTSTDVYAFGAVLLEVACGRRPIETSALPEELV 558

Query: 547 LVDWVKELHLEGEITQAIDQTLD-YYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL 605
           +VDWV      G+I   +D+ L+  +D  E  +V+ LGL CS  +P  RP MR+VV +L 
Sbjct: 559 MVDWVWSRWQSGDIRDVVDRRLNGEFDEEEVVMVIKLGLLCSNNSPEVRPTMRQVVMYLE 618

Query: 606 GDSSLPPLPPDIHLKDTRNIMG----------FSDFPNDSDFFNSKLMSSQSNSFT 651
                P + P     D  + M           F DF + + F++    ++ S+ F+
Sbjct: 619 KQFPSPEVVPAPDFLDANDSMCLDERSGSAGEFEDFVDSARFYSGPNETTTSSIFS 674

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|Q9M345|LRK42_ARATH L-type lectin-domain containing receptor kinase IV.2 OS=Arabidopsis thaliana GN=LECRK42 PE=2 SV=1

 Score =  555 bits (1429), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 292/638 (45%), Positives = 412/638 (64%), Gaps = 14/638 (2%)

Query: 1   MVVVHADTTSFLYNGFLH---ANLSLEGAAYISTSGILTVTNKSEGLIGHALYPNPLRFK 57
           +++  +   +F YNGF H    ++SL+G A ++ +G+L +TN S    GHA     +RFK
Sbjct: 17  IMISSSQNLNFTYNGF-HPPLTDISLQGLATVTPNGLLKLTNTSVQKTGHAFCTERIRFK 75

Query: 58  TSNKSVAIDFRTNFVFSILPKYPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSST 117
            S       F T FVF+I  + P L G G+AF++  T      L +Q++GL NI  S++ 
Sbjct: 76  DSQNGNVSSFSTTFVFAIHSQIPTLSGHGIAFVVAPTLGLPFALPSQYIGLFNI--SNNG 133

Query: 118 KFSTRMLAVEFDIIQNTELIDINDNHVGIDISSLISSASEPASYYSGNNHRIPILLRSGD 177
             +  + AVEFD IQ++E  D NDNHVGID++ L S+    A Y   ++    + L S  
Sbjct: 134 NDTNHIFAVEFDTIQSSEFGDPNDNHVGIDLNGLRSANYSTAGYRDDHDKFQNLSLISRK 193

Query: 178 PIQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLITAS 237
            IQ W+DY ++   I+V++ P    KP +PL+S   DLSS++ E MY GFS++TG + + 
Sbjct: 194 RIQVWIDYDNRSHRIDVTVAPFDSDKPRKPLVSYVRDLSSILLEDMYVGFSSATGSVLSE 253

Query: 238 HNVHGWSISIGGKAQDLNPMKVPTLEKRSHEVVQRRGFSVGITLAGMAFLILIIAGAIHV 297
           H + GWS  + G+A  L+  K+P L +     +    + +G+ L  ++ +  II  A ++
Sbjct: 254 HFLVGWSFRLNGEAPMLSLSKLPKLPRFEPRRISEF-YKIGMPLISLSLIFSIIFLAFYI 312

Query: 298 LQRIKYADKMLEDWEIQCGARRFKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLE 357
           ++R K  ++ L+DWE + G  RF++ EL   TKGF E++L+GSGGFGRVYRG++P+  LE
Sbjct: 313 VRRKKKYEEELDDWETEFGKNRFRFKELYHATKGFKEKDLLGSGGFGRVYRGILPTTKLE 372

Query: 358 VAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSLDKL 417
           VA+KR+ H+S+QGMKEFVAEI+S+GR+ HRNLV L G+CR++ ELLLVYDY+PNGSLDK 
Sbjct: 373 VAVKRVSHDSKQGMKEFVAEIVSIGRMSHRNLVPLLGYCRRRGELLLVYDYMPNGSLDKY 432

Query: 418 LFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLG 477
           L++        L W QR  I+ G+A  L YLHEE  Q V+HRDVK SN+LLD   N +LG
Sbjct: 433 LYNNPE---TTLDWKQRSTIIKGVASGLFYLHEEWEQVVIHRDVKASNVLLDADFNGRLG 489

Query: 478 DFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIE 537
           DFGLA++Y+HG++PQTTH+VGTLGYLAPE +RTG+ATT+TDVY++G  +LEV  GRR IE
Sbjct: 490 DFGLARLYDHGSDPQTTHVVGTLGYLAPEHSRTGRATTTTDVYAFGAFLLEVVSGRRPIE 549

Query: 538 PQKAAAE-LLLVDWVKELHLEGEITQAIDQTLDY--YDLAEAELVLNLGLFCSAPNPVYR 594
              A+ +  LLV+WV  L L G I +A D  L    YDL E E+VL LGL CS  +P  R
Sbjct: 550 FHSASDDTFLLVEWVFSLWLRGNIMEAKDPKLGSSGYDLEEVEMVLKLGLLCSHSDPRAR 609

Query: 595 PDMRRVVEFLLGDSSLPPLPP-DIHLKDTRNIMGFSDF 631
           P MR+V+++L GD +LP L P D+      N+ G   F
Sbjct: 610 PSMRQVLQYLRGDMALPELTPLDLSAGSVMNLGGRDGF 647

Required during pollen development.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O81292|LRK43_ARATH L-type lectin-domain containing receptor kinase IV.3 OS=Arabidopsis thaliana GN=LECRK43 PE=2 SV=1

 Score =  531 bits (1367), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 285/644 (44%), Positives = 406/644 (63%), Gaps = 15/644 (2%)

Query: 6   ADTTSFLYNGFLH--ANLSLEGAAYISTSGILTVTNKSEGLIGHALYPNPLRFKTSNKSV 63
           + + +F YN F     N+S++G A ++++GIL +T+K+    GHA Y  P+RFK S    
Sbjct: 24  SQSLNFTYNSFHRPPTNISIQGIATVTSNGILKLTDKTVISTGHAFYTEPIRFKDSPNDT 83

Query: 64  AIDFRTNFVFSILPKYPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTKFSTRM 123
              F T FV  I    P + G G+AF I       + +A+Q+LGL   + +++   +  +
Sbjct: 84  VSSFSTTFVIGIYSGIPTISGHGMAFFIAPNPVLSSAMASQYLGL--FSSTNNGNDTNHI 141

Query: 124 LAVEFDIIQNTELIDINDNHVGIDISSLISSASEPASYYSGNNHRIPILLRSGDPIQAWV 183
           LAVEFD I N E  D NDNHVGI+I+SL S  S    Y+   N    + L S   +Q WV
Sbjct: 142 LAVEFDTIMNPEFDDTNDNHVGININSLTSVKSSLVGYWDEINQFNNLTLISRKRMQVWV 201

Query: 184 DYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLITASHNVHGW 243
           DY  +   I+V++ P G  KP + L+S+  DLSSV  + MY GFSA+TG + + H V GW
Sbjct: 202 DYDDRTNQIDVTMAPFGEVKPRKALVSVVRDLSSVFLQDMYLGFSAATGYVLSEHFVFGW 261

Query: 244 SISIGGK-AQDLNPMKVPTLEKRSHEVVQR----RGFSVGITLAGMAFLILIIAGAIHVL 298
           S  + GK A  L   KVP   +     +QR    R     + L  + F++ +I     ++
Sbjct: 262 SFMVKGKTAPPLTLSKVPKFPRVGPTSLQRFYKNRMPLFSLLLIPVLFVVSLIFLVRFIV 321

Query: 299 QRIKYADKMLEDWEIQCGARRFKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEV 358
           +R +   +  EDWE + G  R ++ +L   TKGF +++L+GSGGFGRVYRG+MP+   E+
Sbjct: 322 RRRRKFAEEFEDWETEFGKNRLRFKDLYYATKGFKDKDLLGSGGFGRVYRGVMPTTKKEI 381

Query: 359 AIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSLDKLL 418
           A+KR+ + S+QG+KEFVAEI+S+GR+ HRNLV L G+CR++DELLLVYDY+PNGSLDK L
Sbjct: 382 AVKRVSNESRQGLKEFVAEIVSIGRMSHRNLVPLLGYCRRRDELLLVYDYMPNGSLDKYL 441

Query: 419 FDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGD 478
           +D        L W QR+ ++IG+A  L YLHEE  Q V+HRD+K SN+LLD   N +LGD
Sbjct: 442 YDCPE---VTLDWKQRFNVIIGVASGLFYLHEEWEQVVIHRDIKASNVLLDAEYNGRLGD 498

Query: 479 FGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEP 538
           FGLA++ +HG++PQTT +VGT GYLAP+  RTG+ATT+TDV+++G+L+LEVACGRR IE 
Sbjct: 499 FGLARLCDHGSDPQTTRVVGTWGYLAPDHVRTGRATTATDVFAFGVLLLEVACGRRPIEI 558

Query: 539 QKAAAE-LLLVDWVKELHLEGEITQAIDQTL-DYYDLAEAELVLNLGLFCSAPNPVYRPD 596
           +  + E +LLVD V    +EG I  A D  L   YD  E E VL LGL CS  +P  RP 
Sbjct: 559 EIESDESVLLVDSVFGFWIEGNILDATDPNLGSVYDQREVETVLKLGLLCSHSDPQVRPT 618

Query: 597 MRRVVEFLLGDSSLPPLPPDIHLKDTRNIMGFSDFPNDSDFFNS 640
           MR+V+++L GD++LP L P +  + +  ++G +   ++S  F+S
Sbjct: 619 MRQVLQYLRGDATLPDLSP-LDFRGSGKMLGMNHRFSESCTFSS 661

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9SZD5|LRK59_ARATH L-type lectin-domain containing receptor kinase V.9 OS=Arabidopsis thaliana GN=LECRK59 PE=2 SV=1

 Score =  526 bits (1355), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 264/612 (43%), Positives = 396/612 (64%), Gaps = 15/612 (2%)

Query: 5   HADTTSFLYNGFLHANLSLEGAAYISTSGILTVTNKSEGLIGHALYPNPLRFKTSNKSVA 64
            ++   F +NG+L+ N    G A  ++ G++ +TN SE   GH  Y +P+RFK S     
Sbjct: 22  QSEEGEFGFNGYLYDN---SGIAITNSKGLMKLTNSSEFSYGHVFYNSPVRFKNSPNGTV 78

Query: 65  IDFRTNFVFSILPKYPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTKFSTRML 124
             F T FVF+I+     L G GLAF+I  T       ++Q+LGL N+T +     S  ++
Sbjct: 79  SSFSTTFVFAIVSNVNALDGHGLAFVISPTKGLPYSSSSQYLGLFNLTNNGDP--SNHIV 136

Query: 125 AVEFDIIQNTELIDINDNHVGIDISSLISSASEPASYYSGNNHRIP-ILLRSGDPIQAWV 183
           AVEFD  QN E  D+++NHVGIDI+SL S  +  A YY  ++     I L +  PIQAW+
Sbjct: 137 AVEFDTFQNQEFDDMDNNHVGIDINSLSSEKASTAGYYEDDDGTFKNIRLINQKPIQAWI 196

Query: 184 DYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLITASHNVHGW 243
           +Y S    +NV+I P+ +PKP  PL+SL  DLS  + + MY GF+++TG + +SH + GW
Sbjct: 197 EYDSSRRQLNVTIHPIHLPKPKIPLLSLTKDLSPYLFDSMYVGFTSATGRLRSSHYILGW 256

Query: 244 SISIGGKAQDLNPMKVPTLEKRSHEVVQRRGFSVGITLAGMAFLILIIAGAIHVLQRIKY 303
           +  + G A +++  ++P L + S     ++  ++ ++L  +A L+ +    +  L+R K 
Sbjct: 257 TFKLNGTASNIDISRLPKLPRDSRSTSVKKILAISLSLTSLAILVFLTISYMLFLKRKKL 316

Query: 304 ADKMLEDWEIQCGARRFKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRI 363
            + +LEDWE+Q G  RF Y +L   TKGF    L+G GGFG+VY+G + +  +++A+K++
Sbjct: 317 ME-VLEDWEVQFGPHRFAYKDLYIATKGFRNSELLGKGGFGKVYKGTLSTSNMDIAVKKV 375

Query: 364 GHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDH 423
            H+S+QGM+EFVAEI ++GRLRH NLV+L G+CR++ EL LVYD +P GSLDK L+   H
Sbjct: 376 SHDSRQGMREFVAEIATIGRLRHPNLVRLLGYCRRKGELYLVYDCMPKGSLDKFLY---H 432

Query: 424 KLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK 483
           +  + L W QR+KI+  +A  L YLH +  Q ++HRD+KP+N+LLD  +N KLGDFGLAK
Sbjct: 433 QPEQSLDWSQRFKIIKDVASGLCYLHHQWVQVIIHRDIKPANVLLDDSMNGKLGDFGLAK 492

Query: 484 IYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAA- 542
           + EHG +PQT+++ GT GY++PEL+RTGKA+TS+DV+++GILMLE+ CGRR + P+ ++ 
Sbjct: 493 LCEHGFDPQTSNVAGTFGYISPELSRTGKASTSSDVFAFGILMLEITCGRRPVLPRASSP 552

Query: 543 AELLLVDWVKELHLEGEITQAIDQTL---DYYDLAEAELVLNLGLFCSAPNPVYRPDMRR 599
           +E++L DWV +   E +I Q +D+ +   D Y   +  LVL LGLFCS P    RP M  
Sbjct: 553 SEMVLTDWVLDC-WEDDILQVVDERVKQDDKYLEEQVALVLKLGLFCSHPVAAVRPSMSS 611

Query: 600 VVEFLLGDSSLP 611
           V++FL G + LP
Sbjct: 612 VIQFLDGVAQLP 623

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O81291|LRK44_ARATH L-type lectin-domain containing receptor kinase IV.4 OS=Arabidopsis thaliana GN=LECRK44 PE=3 SV=1

 Score =  523 bits (1347), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 284/637 (44%), Positives = 404/637 (63%), Gaps = 15/637 (2%)

Query: 11  FLYNGFLH--ANLSLEGAAYISTSGILTVTNKSEGLIGHALYPNPLRFKTSNKSVAIDFR 68
           F YNGF     ++S+ G A I+ +G+L +TN +    GHA Y  P+RFK S       F 
Sbjct: 28  FTYNGFRPPPTDISILGIATITPNGLLKLTNTTMQSTGHAFYTKPIRFKDSPNGTVSSFS 87

Query: 69  TNFVFSILPKYPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTKFSTRMLAVEF 128
           T FVF+I  + P     G+AF+I    R       Q+LGL N+T + + +    + AVE 
Sbjct: 88  TTFVFAIHSQIPI--AHGMAFVIAPNPRLPFGSPLQYLGLFNVTNNGNVR--NHVFAVEL 143

Query: 129 DIIQNTELIDINDNHVGIDISSLISSASEPASYYSGNNHRIPILLRSGDPIQAWVDYSSQ 188
           D I N E  D N+NHVGIDI+SL S  S PA Y+  N+    + L S   +Q WVD+   
Sbjct: 144 DTIMNIEFNDTNNNHVGIDINSLNSVKSSPAGYWDENDQFHNLTLISSKRMQVWVDFDGP 203

Query: 189 EMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLITASHNVHGWSISIG 248
             LI+V++ P G  KP +PL+S+  DLSSV+ + M+ GFS++TG I +   V GWS  + 
Sbjct: 204 THLIDVTMAPFGEVKPRKPLVSIVRDLSSVLLQDMFVGFSSATGNIVSEIFVLGWSFGVN 263

Query: 249 GKAQDLNPMKVPTL---EKRSHEVVQRRGFSVGITLAGMAFLILIIAGAIHVLQRIKYAD 305
           G+AQ L   K+P L   + +   V +     V +    +   +LII     +++R +   
Sbjct: 264 GEAQPLALSKLPRLPVWDLKPTRVYRFYKNWVPLISLLLIPFLLIIFLVRFIMKRRRKFA 323

Query: 306 KMLEDWEIQCGARRFKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGH 365
           + +EDWE + G  R ++ +L   TKGF ++N++GSGGFG VY+G+MP    E+A+KR+ +
Sbjct: 324 EEVEDWETEFGKNRLRFKDLYYATKGFKDKNILGSGGFGSVYKGIMPKTKKEIAVKRVSN 383

Query: 366 NSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKL 425
            S+QG+KEFVAEI+S+G++ HRNLV L G+CR++DELLLVYDY+PNGSLDK L++     
Sbjct: 384 ESRQGLKEFVAEIVSIGQMSHRNLVPLVGYCRRRDELLLVYDYMPNGSLDKYLYNSPEVT 443

Query: 426 RKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIY 485
              L W QR+K++ G+A +L YLHEE  Q V+HRDVK SN+LLD  LN +LGDFGLA++ 
Sbjct: 444 ---LDWKQRFKVINGVASALFYLHEEWEQVVIHRDVKASNVLLDAELNGRLGDFGLAQLC 500

Query: 486 EHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAE- 544
           +HG++PQTT +VGT GYLAP+  RTG+ATT+TDV+++G+L+LEVACGRR IE    + E 
Sbjct: 501 DHGSDPQTTRVVGTWGYLAPDHIRTGRATTTTDVFAFGVLLLEVACGRRPIEINNQSGER 560

Query: 545 LLLVDWVKELHLEGEITQAIDQTL-DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEF 603
           ++LVDWV    +E  I  A D  L   YD  E E+VL LGL CS  +P+ RP MR+V+++
Sbjct: 561 VVLVDWVFRFWMEANILDAKDPNLGSEYDQKEVEMVLKLGLLCSHSDPLARPTMRQVLQY 620

Query: 604 LLGDSSLPPLPPDIHLKDTRNIMGFSDFPNDSDFFNS 640
           L GD+ LP L P + L+ +  ++G  +  N+S  F S
Sbjct: 621 LRGDAMLPDLSP-LDLRGSGIMLGTHNGSNESGMFTS 656

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O80939|LRK41_ARATH L-type lectin-domain containing receptor kinase IV.1 OS=Arabidopsis thaliana GN=LECRK41 PE=1 SV=1

 Score =  521 bits (1342), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 276/614 (44%), Positives = 391/614 (63%), Gaps = 10/614 (1%)

Query: 6   ADTTSFLYNGFLH--ANLSLEGAAYISTSGILTVTNKSEGLIGHALYPNPLRFKTSNKSV 63
           + + +F YN   +   +LS++G   ++ +G+L +TN +    GHA Y  P+RFK S    
Sbjct: 22  SQSLNFAYNNGFNPPTDLSIQGITTVTPNGLLKLTNTTVQKTGHAFYTKPIRFKDSPNGT 81

Query: 64  AIDFRTNFVFSILPKYPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTKFSTRM 123
              F T+FVF+I  +   L G G+AF++           +Q++GL N+  + +   +  +
Sbjct: 82  VSSFSTSFVFAIHSQIAILSGHGIAFVVAPNASLPYGNPSQYIGLFNLANNGNE--TNHV 139

Query: 124 LAVEFDIIQNTELIDINDNHVGIDISSLISSASEPASYYSGNNHRIPILLRSGDPIQAWV 183
            AVE D I +TE  D NDNHVGIDI+SL S  S PA Y+        + L S  P+Q WV
Sbjct: 140 FAVELDTILSTEFNDTNDNHVGIDINSLKSVQSSPAGYWDEKGQFKNLTLISRKPMQVWV 199

Query: 184 DYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLITASHNVHGW 243
           DY  +   I+V++ P    KP RPL++   DLSSV+ + MY GFS++TG + + H + GW
Sbjct: 200 DYDGRTNKIDVTMAPFNEDKPTRPLVTAVRDLSSVLLQDMYVGFSSATGSVLSEHYILGW 259

Query: 244 SISIGGKAQDLNPMKVPTLEKRSHEVVQRRGFSVGITLAGMAFLILIIAGAIHVLQRIKY 303
           S  +  KA  L   ++P L +   + +    + +G+ L  +  +   I    ++++R + 
Sbjct: 260 SFGLNEKAPPLALSRLPKLPRFEPKRISEF-YKIGMPLISLFLIFSFIFLVCYIVRRRRK 318

Query: 304 ADKMLEDWEIQCGARRFKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRI 363
             + LE+WE + G  RF++ +L   TKGF E+ L+G+GGFG VY+G+MP   LE+A+KR+
Sbjct: 319 FAEELEEWEKEFGKNRFRFKDLYYATKGFKEKGLLGTGGFGSVYKGVMPGTKLEIAVKRV 378

Query: 364 GHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDH 423
            H S+QGMKEFVAEI+S+GR+ HRNLV L G+CR++ ELLLVYDY+PNGSLDK L++   
Sbjct: 379 SHESRQGMKEFVAEIVSIGRMSHRNLVPLLGYCRRRGELLLVYDYMPNGSLDKYLYNTPE 438

Query: 424 KLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK 483
                L W QR K+++G+A  L YLHEE  Q V+HRDVK SN+LLD  LN +LGDFGLA+
Sbjct: 439 VT---LNWKQRIKVILGVASGLFYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLAR 495

Query: 484 IYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAA 543
           +Y+HG++PQTTH+VGTLGYLAPE TRTG+AT +TDV+++G  +LEVACGRR IE Q+   
Sbjct: 496 LYDHGSDPQTTHVVGTLGYLAPEHTRTGRATMATDVFAFGAFLLEVACGRRPIEFQQETD 555

Query: 544 E-LLLVDWVKELHLEGEITQAIDQTL-DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVV 601
           E  LLVDWV  L  +G+I  A D  +    D  E E+VL LGL CS  +P  RP MR+V+
Sbjct: 556 ETFLLVDWVFGLWNKGDILAAKDPNMGSECDEKEVEMVLKLGLLCSHSDPRARPSMRQVL 615

Query: 602 EFLLGDSSLPPLPP 615
            +L GD+ LP L P
Sbjct: 616 HYLRGDAKLPELSP 629

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O04534|LRK51_ARATH Putative L-type lectin-domain containing receptor kinase V.1 OS=Arabidopsis thaliana GN=LECRK51 PE=3 SV=1

 Score =  503 bits (1296), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 257/596 (43%), Positives = 377/596 (63%), Gaps = 9/596 (1%)

Query: 19  ANLSLEGAAYISTSGILTVTNKSEGLIGHALYPNPLRFKTSNKSVAIDFRTNFVFSILPK 78
            N+   G+AYI+ +G++ +TN +    G   Y + LRFK S       F T FVFSI   
Sbjct: 32  GNMYTSGSAYINNNGLIRLTNSTPQTTGQVFYNDQLRFKNSVNGTVSSFSTTFVFSIEFH 91

Query: 79  YPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTKFSTRMLAVEFDIIQNTELID 138
               GG G+AF+I  T          +LGL N +     K    ++AVE D   + +  D
Sbjct: 92  NGIYGGYGIAFVICPTRDLSPTFPTTYLGLFNRSNMGDPK--NHIVAVELDTKVDQQFED 149

Query: 139 INDNHVGIDISSLISSASEPASYYSGNNHRIPILLRSGDPIQAWVDYSSQEMLINVSICP 198
            + NHVGIDI++L+S     A YY  N     +LL SG P+Q W++Y S++  INV++ P
Sbjct: 150 KDANHVGIDINTLVSDTVALAGYYMDNGTFRSLLLNSGQPMQIWIEYDSKQKQINVTLHP 209

Query: 199 LGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLITASHNVHGWSISIGGKAQDLNPMK 258
           L VPKP  PL+SL  DLS  + E MY GF+++TG +TASH + GW+  + G   D++P +
Sbjct: 210 LYVPKPKIPLLSLEKDLSPYLLELMYVGFTSTTGDLTASHYILGWTFKMNGTTPDIDPSR 269

Query: 259 VPTLEKRSHEVVQRRG--FSVGITLAGMAFLILIIAGAIHVLQRIKYADKMLEDWEIQCG 316
           +P + + +   +Q      ++ +T++G+  LI++       L+R K  + +LEDWE+Q G
Sbjct: 270 LPKIPRYNQPWIQSPNGILTISLTVSGVIILIILSLSLWLFLKRKKLLE-VLEDWEVQFG 328

Query: 317 ARRFKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVA 376
             RF + +L   TKGF +  ++G GGFG+VY+G +P   +E+A+K + H+S+QGM+EF+A
Sbjct: 329 PHRFAFKDLHIATKGFKDTEVLGKGGFGKVYKGTLPVSNVEIAVKMVSHDSRQGMREFIA 388

Query: 377 EIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYK 436
           EI ++GRLRH NLV+L G+CR + EL LVYD +  GSLDK L+   H+    L W QR+K
Sbjct: 389 EIATIGRLRHPNLVRLQGYCRHKGELYLVYDCMAKGSLDKFLY---HQQTGNLDWSQRFK 445

Query: 437 ILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHI 496
           I+  +A  L YLH++  Q ++HRD+KP+NILLD  +NAKLGDFGLAK+ +HG +PQT+H+
Sbjct: 446 IIKDVASGLYYLHQQWVQVIIHRDIKPANILLDANMNAKLGDFGLAKLCDHGTDPQTSHV 505

Query: 497 VGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHL 556
            GTLGY++PEL+RTGKA+T +DV+++GI+MLE+ACGR+ I P+ +  E++L DWV E   
Sbjct: 506 AGTLGYISPELSRTGKASTRSDVFAFGIVMLEIACGRKPILPRASQREMVLTDWVLECWE 565

Query: 557 EGEITQAIDQTL-DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLGDSSLP 611
             +I Q +D  +   Y   +A LVL LGLFCS P    RP+M  V++ L   + LP
Sbjct: 566 NEDIMQVLDHKIGQEYVEEQAALVLKLGLFCSHPVAAIRPNMSSVIQLLDSVAQLP 621

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9FIF1|LRK21_ARATH Probable L-type lectin-domain containing receptor kinase II.1 OS=Arabidopsis thaliana GN=LECRK21 PE=2 SV=1

 Score =  475 bits (1223), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 268/621 (43%), Positives = 384/621 (61%), Gaps = 35/621 (5%)

Query: 11  FLYNGFLHANLSLEGAAYISTSGILTVTNKSEGLIGHALYPNPLRFKTSNKSVAIDFRTN 70
           F+Y  F +A+L L+G A  +  G L +TN +    GHA Y  P++F  S+ S        
Sbjct: 30  FVYYDFRNADLELDGMAN-TNHGPLHLTNNTNTGTGHAFYNIPIKFTASSLSSFSFSTEF 88

Query: 71  FVFSILPKYPDLGGQGLAFIIIST-NRPENCLANQFLGLPNITMSSSTKFSTRMLAVEFD 129
              +I P      G G+AF++  T +   N  AN  LG+ N   ++  K +T + AVE D
Sbjct: 89  VF-AIFPLQKSTYGHGMAFVVSPTKDLRSNGSANSNLGIFN--RANDNKTATHIFAVELD 145

Query: 130 IIQNTELIDINDNHVGIDISSLISSASEPASYYSGNNHR-IPILLRSGDPIQAWVDYSSQ 188
             QN+E  D   N VGIDI+S++S  S  ASY++    + I + L SG  I  W+DY   
Sbjct: 146 TNQNSESFDKGGNDVGIDINSIVSVESADASYFNARKGKNISLPLASGKSILVWIDYDGI 205

Query: 189 EMLINVSICPLGVPKPYRP-----------LISLPIDLSSVIDEYMYTGFSASTGLITAS 237
           E ++NV++ P+  PKP  P           L+S  I+LS +  E MY GFS STG I ++
Sbjct: 206 EKVLNVTLAPVQTPKPDSPYFSSFIKPKVPLLSRSINLSEIFTETMYVGFSGSTGSIKSN 265

Query: 238 HNVHGWSISIGGKAQDLNPMKV---PTLEKRS--HEVVQRRGFSVGITLAGMAFLILIIA 292
             + GWS   GGKA+ L+  ++   P   KR    EV+       G T++ +AFL L   
Sbjct: 266 QYILGWSFKQGGKAESLDISRLSNPPPSPKRFPLKEVL-------GATISTIAFLTL--G 316

Query: 293 GAIHVLQRIKYADKMLEDWEIQCGARRFKYAELASVTKGFGEQNLVGSGGFGRVYRGLMP 352
           G +++ ++ KYA+ +LE WE +   +R+ +  L   TKGF E  L+G+GGFG+VY+G++P
Sbjct: 317 GIVYLYKKKKYAE-VLEQWEKEYSPQRYSFRILYKATKGFRENQLLGAGGFGKVYKGILP 375

Query: 353 SLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNG 412
           S G ++A+KR+ H+++QGMK++VAEI SMGRLRH+NLV L G+CR++ ELLLVYDY+PNG
Sbjct: 376 S-GTQIAVKRVYHDAEQGMKQYVAEIASMGRLRHKNLVHLLGYCRRKGELLLVYDYMPNG 434

Query: 413 SLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYL 472
           SLD  LF K+ KL+ L TW QR  I+ G+A +LLYLHEE  Q V+HRD+K SNILLD  L
Sbjct: 435 SLDDYLFHKN-KLKDL-TWSQRVNIIKGVASALLYLHEEWEQVVLHRDIKASNILLDADL 492

Query: 473 NAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACG 532
           N KLGDFGLA+ ++ G N + T +VGT+GY+APELT  G  TT TDVY++G  +LEV CG
Sbjct: 493 NGKLGDFGLARFHDRGVNLEATRVVGTIGYMAPELTAMGVTTTCTDVYAFGAFILEVVCG 552

Query: 533 RRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPV 592
           RR ++P     +++LV WV        +T  +D  L  + + EA+L+L LG+ CS  NP 
Sbjct: 553 RRPVDPDAPREQVILVKWVASCGKRDALTDTVDSKLIDFKVEEAKLLLKLGMLCSQINPE 612

Query: 593 YRPDMRRVVEFLLGDSSLPPL 613
            RP MR+++++L G+ S+P +
Sbjct: 613 NRPSMRQILQYLEGNVSVPAI 633

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9FIF0|LRK22_ARATH Putative L-type lectin-domain containing receptor kinase II.2 OS=Arabidopsis thaliana GN=LECRK22 PE=3 SV=3

 Score =  474 bits (1221), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 268/652 (41%), Positives = 392/652 (60%), Gaps = 53/652 (8%)

Query: 2   VVVHADTTSFLYNGFLHANLSLEGAAYISTSGILTVTNKSEGLIGHALYPNPLRFKTSNK 61
           +V+  D   F+Y+ F  A+L L+G A I   G L +TN +    GHA +  P+ F TS  
Sbjct: 21  LVLAQDRDEFVYHDFSQADLHLDGMASID-DGRLHLTNNTTKSTGHAFWKIPMNFTTSPS 79

Query: 62  SVAIDFRTNFVFSILPKYPDLGGQGLAFIIIS-TNRPENCLANQFLGLPNITMSSSTKFS 120
           S      T FVF+I P   D  GQG+AF++    +   +  A  +LGL N    +  K  
Sbjct: 80  SSLSF-STEFVFAIFPLLGD--GQGMAFVVAPFMDIRYSGDAASYLGLFN--RKNDNKTE 134

Query: 121 TRMLAVEFDIIQNTELIDINDNHVGIDISSLISSASEPASYYSGNNHR-IPILLRSGDPI 179
             +LAVE D   + E I+ +DNHVGIDI+S+IS  S  ASY+SG   + I   L S   I
Sbjct: 135 NHILAVELDTNSSPEAIEDSDNHVGIDINSIISEDSANASYFSGTEGKNISFRLASEKSI 194

Query: 180 QAWVDYSSQEMLINVSICPLGVPKP-----------YRPLISLPIDLSSVIDEYMYTGFS 228
             W+DY+  E L+NV++ P+  PKP            +PL+S  I++S + +  M+ GFS
Sbjct: 195 LVWIDYNGTEKLLNVTVAPVPTPKPALPYLSSSIKPRKPLLSRFINISEIFNGTMFVGFS 254

Query: 229 ASTGLITASHNVHGWSISIGGKAQDLNPMKV------------------------PTLEK 264
            STG + +   + GWS   GG+A+ L+  K+                         +  K
Sbjct: 255 GSTGTVKSDQYILGWSFKKGGQAESLDLSKILDPPNRPPPPSSPPPPPPPPPTPPTSRSK 314

Query: 265 RSHEVVQRRGFSVGITLAGMAFLILIIAGAIHVLQRIKYADKMLEDWEIQCGARRFKYAE 324
            S  ++      + +T+  +AFL L++ G +++ ++ KYA+ +LE WE +   +R+ +  
Sbjct: 315 DSKNII-----IICVTVTSIAFL-LMLGGFLYLYKKKKYAE-VLEHWENEYSPQRYSFRN 367

Query: 325 LASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRL 384
           L    +GF E  L+G+GGFG+VY+G +PS G ++A+KR+ HN++QGMK++ AEI SMGRL
Sbjct: 368 LYKAIRGFRENRLLGAGGFGKVYKGELPS-GTQIAVKRVYHNAEQGMKQYAAEIASMGRL 426

Query: 385 RHRNLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQS 444
           RH+NLVQL G+CR++ ELLLVYDY+PNGSLD  LF+K+ KL+ L TW QR  I+ G+A +
Sbjct: 427 RHKNLVQLLGYCRRKGELLLVYDYMPNGSLDDYLFNKN-KLKDL-TWSQRVNIIKGVASA 484

Query: 445 LLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLA 504
           LLYLHEE  Q V+HRD+K SNILLD  LN +LGDFGLA+ ++ G N Q T +VGT+GY+A
Sbjct: 485 LLYLHEEWEQVVLHRDIKASNILLDADLNGRLGDFGLARFHDRGENLQATRVVGTIGYMA 544

Query: 505 PELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAI 564
           PELT  G ATT TD+Y++G  +LEV CGRR +EP +   ++ L+ WV        +   +
Sbjct: 545 PELTAMGVATTKTDIYAFGSFILEVVCGRRPVEPDRPPEQMHLLKWVATCGKRDTLMDVV 604

Query: 565 DQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLGDSSLPPLPPD 616
           D  L  +   EA+L+L LG+ CS  NP  RP MR ++++L G++++P +  D
Sbjct: 605 DSKLGDFKAKEAKLLLKLGMLCSQSNPESRPSMRHIIQYLEGNATIPSISFD 656

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9LSR9|LRK18_ARATH L-type lectin-domain containing receptor kinase I.8 OS=Arabidopsis thaliana GN=LECRK18 PE=2 SV=1

 Score =  471 bits (1212), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 266/611 (43%), Positives = 373/611 (61%), Gaps = 22/611 (3%)

Query: 9   TSFLYNGFLHANLSLEGAAYISTSGILTVTNKSEGLIGHALYPNPLRFKTSNKSVAIDFR 68
           T F +NGF   +L ++G A I   G+L +T+ SE   GHA +  PL F   N S  + F 
Sbjct: 26  TGFSFNGFRQGDLHVDGVAQILPGGLLRLTDTSEQKKGHAFFRQPLVF---NSSEPLSFS 82

Query: 69  TNFVFSILPKYPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTKFSTRMLAVEF 128
           T+FV +++ K    GG G+AF +  +    N  A Q+LGL N T + S   S+ + A+E 
Sbjct: 83  THFVCAMVRKPGVTGGNGIAFFLSPSMDLTNADATQYLGLFNTTTNRSP--SSHIFAIEL 140

Query: 129 DIIQNTELIDINDNHVGIDISSLISSASEPASYYS---GNNHRIPILLRSGDPIQAWVDY 185
           D +Q+ E  DI++NHVGID++SL S  S PASY+S   G N  I +L  SGD IQ WVD+
Sbjct: 141 DTVQSAEFDDIDNNHVGIDVNSLTSVESAPASYFSDKKGLNKSISLL--SGDSIQVWVDF 198

Query: 186 SSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLITASHNVHGWSI 245
                ++NVS+ PLG+ KP + LIS  ++LS VI + M+ GFSA+TG +  +H + GWS 
Sbjct: 199 DG--TVLNVSLAPLGIRKPSQSLISRSMNLSEVIQDRMFVGFSAATGQLANNHYILGWSF 256

Query: 246 SIGGKAQDLNPMKVPTLEKRSHEVVQRRGFSVGITLAGMAFLILIIAGAIHVLQRIKYAD 305
           S       L  + +  L +  H  ++     + + +     L++++ GA ++ +R KYA+
Sbjct: 257 S--RSKASLQSLDISKLPQVPHPKMKTSLLLILLLIVLGIILLVLLVGA-YLYRRNKYAE 313

Query: 306 KMLEDWEIQCGARRFKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGH 365
            + E+WE + G  R+ Y  L   TKGF +   +G GGFG VY+G +P    ++A+KR  H
Sbjct: 314 -VREEWEKEYGPHRYSYKSLYKATKGFHKDGFLGKGGFGEVYKGTLPQE--DIAVKRFSH 370

Query: 366 NSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKL 425
           + ++GMK+FVAEI SMG L HRNLV L G+CR++ E LLV  Y+PNGSLD+ LF   H  
Sbjct: 371 HGERGMKQFVAEIASMGCLDHRNLVPLFGYCRRKGEFLLVSKYMPNGSLDQFLF---HNR 427

Query: 426 RKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIY 485
              LTW +R  IL GIA +L YLH E  Q V+HRD+K SN++LDT    KLGDFG+A+ +
Sbjct: 428 EPSLTWSKRLGILKGIASALKYLHTEATQVVLHRDIKASNVMLDTDFTGKLGDFGMARFH 487

Query: 486 EHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAEL 545
           +HGANP TT  VGT+GY+ PELT  G A+T TDVY++G L+LEV CGRR +EP     + 
Sbjct: 488 DHGANPTTTGAVGTVGYMGPELTSMG-ASTKTDVYAFGALILEVTCGRRPVEPNLPIEKQ 546

Query: 546 LLVDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL 605
           LLV WV +     ++  A D  L    + + E+VL LGL C+   P  RPDM +VV++L 
Sbjct: 547 LLVKWVCDCWKRKDLISARDPKLSGELIPQIEMVLKLGLLCTNLVPESRPDMVKVVQYLD 606

Query: 606 GDSSLPPLPPD 616
              SLP   PD
Sbjct: 607 RQVSLPDFSPD 617

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	653
147860501	625	hypothetical protein VITISV_016437 [Viti	0.917	0.958	0.637	0.0
356528060	666	PREDICTED: L-type lectin-domain containi	0.940	0.921	0.621	0.0
359481749	1258	PREDICTED: L-type lectin-domain containi	0.947	0.492	0.492	1e-167
449439978	683	PREDICTED: L-type lectin-domain containi	0.958	0.916	0.472	1e-167
225449434	679	PREDICTED: L-type lectin-domain containi	0.901	0.867	0.495	1e-166
255559006	667	kinase, putative [Ricinus communis] gi|2	0.911	0.892	0.489	1e-166
356567976	674	PREDICTED: L-type lectin-domain containi	0.957	0.927	0.474	1e-165
255584540	683	kinase, putative [Ricinus communis] gi|2	0.918	0.878	0.479	1e-164
225439478	680	PREDICTED: L-type lectin-domain containi	0.918	0.882	0.478	1e-164
255558978	662	kinase, putative [Ricinus communis] gi|2	0.917	0.904	0.488	1e-164

>gi|147860501|emb|CAN83975.1| hypothetical protein VITISV_016437 [Vitis vinifera]

 Score =  830 bits (2143), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 398/624 (63%), Positives = 507/624 (81%), Gaps = 25/624 (4%)

Query: 9   TSFLYNGFLHANLSLEGAAYISTSGILTVTNKSEGLIGHALYPNPLRFKTS--NKSVAID 66
           TSF+YNGFL A+LSL+GA+ + ++GIL++TN S  LIGHA YP+P+ FK S  ++S  + 
Sbjct: 20  TSFVYNGFLKADLSLDGASQLRSNGILSLTNDSVRLIGHAFYPSPIHFKRSKDHRSWVVT 79

Query: 67  FRTNFVFSILPKYPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTKFSTRMLAV 126
           F TNFVFS+ PKYP LGG GLAF+++ST  P  CL NQ+LGLPN+T  S+  FSTR+LAV
Sbjct: 80  FSTNFVFSMAPKYPGLGGHGLAFVLLSTKAPMGCLPNQYLGLPNVT--SNADFSTRVLAV 137

Query: 127 EFDIIQNTELIDINDNHVGIDISSLISSASEPASYYSGNNHRIPILLRSGDPIQAWVDYS 186
           EFD +QN EL+DINDNHVGIDISSLIS+ S+PA+YY  NN    I  +SGDPIQAW++Y+
Sbjct: 138 EFDAVQNLELMDINDNHVGIDISSLISNVSKPAAYYFTNNSNNSIAFKSGDPIQAWIEYN 197

Query: 187 SQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLITASHNVHGWSIS 246
           SQE L+NV+I PLG+PK +RPLIS PIDLS V++EYM+ GFSASTGL+TA+HNVHGWS  
Sbjct: 198 SQEQLMNVTISPLGIPKSFRPLISFPIDLSMVLNEYMHIGFSASTGLLTAAHNVHGWSFR 257

Query: 247 IGGKAQDLNPMKVPTLEKRSHEVVQRRGFSVGITLAGMAFLILIIAGAIHVLQRIKYADK 306
           IGG+A DL+P+++P+   RS +V+ +RG ++GI LA    +IL+I+G  HV+ RI+  ++
Sbjct: 258 IGGRAADLDPLRLPSPVTRSRKVLHQRGLTLGIILASATLVILVISGTAHVVHRIRNKEE 317

Query: 307 MLEDWEIQCGARRFKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN 366
           +LE+WE++ GA RFKY++L S T+GF E+NL+GSGGFGRVY+G++P  GLEVAIKR+ H+
Sbjct: 318 ILEEWEVEYGAHRFKYSDLFSATRGFREKNLIGSGGFGRVYKGIIPRTGLEVAIKRVAHD 377

Query: 367 SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLR 426
           S+QGMKEFVAEI+SMGRLRHRNLVQLHGWCR+QDEL+LVYDYVPNGSLDK+LFD D + +
Sbjct: 378 SRQGMKEFVAEIISMGRLRHRNLVQLHGWCRRQDELILVYDYVPNGSLDKILFD-DQQKK 436

Query: 427 KLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE 486
           K+LTW+QRYKILIG++Q+LLYLHEEC+QRVVHRDVKPSN+L+D  LNA+LGDFGLA++Y+
Sbjct: 437 KILTWEQRYKILIGVSQALLYLHEECDQRVVHRDVKPSNVLIDAELNARLGDFGLARMYK 496

Query: 487 HGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELL 546
           HG NP+TTHIVGTLGYLAPELTR GKATTS DVY+YG+LMLEVA GRR IEPQ+ A EL+
Sbjct: 497 HGNNPETTHIVGTLGYLAPELTRIGKATTSIDVYAYGVLMLEVATGRRPIEPQRNAQELV 556

Query: 547 LVDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG 606
           L+DW                    Y+  EA+LVL+LGL CS P+P YRPD+RRV+++LL 
Sbjct: 557 LMDW--------------------YNPDEAKLVLSLGLLCSHPHPDYRPDIRRVIQYLLK 596

Query: 607 DSSLPPLPPDIHLKDTRNIMGFSD 630
           D  LP LPPD+HL+    ++ FSD
Sbjct: 597 DVCLPELPPDVHLEVPGTMIEFSD 620

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356528060|ref|XP_003532623.1| PREDICTED: L-type lectin-domain containing receptor kinase S.4-like [Glycine max]

 Score =  822 bits (2124), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 386/621 (62%), Positives = 491/621 (79%), Gaps = 7/621 (1%)

Query: 10  SFLYNGFLHANLSLEGAAYISTSGILTVTNKSEGLIGHALYPNPLRFKTS-NKSVAIDFR 68
           +F+  GF  A L ++GA+Y+  +GILT+ N S  ++GHA YP+PL FK+S NKS+   F 
Sbjct: 25  NFVKYGFKQAGLKMDGASYVRPNGILTLINDSPKILGHAFYPSPLPFKSSKNKSIVATFS 84

Query: 69  TNFVFSILPKYPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTKFSTRMLAVEF 128
           T FVFSI+PKYP+LG QG AF++ISTN+P+ CL NQ+LGLPN+T  SS +FSTR LA+EF
Sbjct: 85  TTFVFSIVPKYPELGAQGFAFVLISTNKPKGCLMNQYLGLPNVT--SSLEFSTRFLAIEF 142

Query: 129 DIIQNTELIDINDNHVGIDISSLISSASEPASYY-SGNNHRIPILLRSGDPIQAWVDYSS 187
           D IQN +L D+NDNHVGIDISSLIS+ S P +YY S ++  I   L+SG PIQAWVDY+ 
Sbjct: 143 DGIQNLDLHDMNDNHVGIDISSLISNISRPVAYYLSDHSKNISFSLKSGKPIQAWVDYNE 202

Query: 188 QEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLITASHNVHGWSISI 247
            EML+NV++ P G+PKPY PLIS PIDLS V+++YMY GFSAS GL+ A HN+HGW   I
Sbjct: 203 GEMLMNVTVSPFGMPKPYFPLISFPIDLSLVLNDYMYAGFSASNGLLVAEHNIHGWGFKI 262

Query: 248 GGKAQDLNPMKVPTL---EKRSHEVVQRRGFSVGITLAGMAFLILIIAGAIHVLQRIKYA 304
           G   Q+L+   VP +      S +VV ++ F+VGITL      IL + GA HVL+R++  
Sbjct: 263 GEAGQELDKSAVPLIGSSTSTSSKVVHKKDFAVGITLTSATLFILTVIGAFHVLRRLRNG 322

Query: 305 DKMLEDWEIQCGARRFKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIG 364
           D++LEDWE++  + +FKY+EL S T  FG+ NL+G GGFG+VYRG++ S GLEVA+KR+ 
Sbjct: 323 DEILEDWELEFASHKFKYSELHSATGKFGDSNLIGYGGFGKVYRGVIASTGLEVAVKRVA 382

Query: 365 HNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHK 424
            +S+QG++EFV+EI SM +L+HRNLVQLHGWCRK+DELL+VY+YVPNGSLDKLLF+ +H+
Sbjct: 383 PDSRQGIREFVSEITSMAQLKHRNLVQLHGWCRKKDELLIVYNYVPNGSLDKLLFENEHQ 442

Query: 425 LRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKI 484
            +KLLTWDQRY I+ G+AQ LLYLHEEC  +VVHRDVKPSN+L+D  L  KLGDFGLA+ 
Sbjct: 443 KKKLLTWDQRYTIITGVAQGLLYLHEECELQVVHRDVKPSNVLIDEDLQPKLGDFGLART 502

Query: 485 YEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAE 544
           YEHG NPQTT++VGTLGY+APELT+TGKA TSTDVY YGIL+LEVACGR+ IEPQK   E
Sbjct: 503 YEHGINPQTTNVVGTLGYMAPELTKTGKARTSTDVYGYGILILEVACGRKPIEPQKNPEE 562

Query: 545 LLLVDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL 604
           L+LVDWV+ELH +G+I++AID +LD YD  EA LVL+LGLFC+ PNP YRP MRR+V+FL
Sbjct: 563 LVLVDWVRELHHQGKISRAIDPSLDEYDKDEARLVLSLGLFCAHPNPDYRPSMRRIVQFL 622

Query: 605 LGDSSLPPLPPDIHLKDTRNI 625
           LG++SLPPLPPDIH +D   I
Sbjct: 623 LGETSLPPLPPDIHCEDPTAI 643

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359481749|ref|XP_003632669.1| PREDICTED: L-type lectin-domain containing receptor kinase IV.2-like [Vitis vinifera]

 Score =  595 bits (1535), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 313/636 (49%), Positives = 425/636 (66%), Gaps = 17/636 (2%)

Query: 6    ADTTSFLYNGF-LHANLSLEGAAYISTSGILTVTNKSEGLIGHALYPNPLRFKTSNKSVA 64
             +  SF YNGF   ANLSL+G A  + +G+L +TN+++   GHA Y +P+RFK S+ + A
Sbjct: 609  GEDVSFTYNGFQTAANLSLDGLAQFTPNGLLILTNRTKQETGHAFYSHPMRFKNSSNAPA 668

Query: 65   IDFRTNFVFSILPKYPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTKFSTRML 124
              F T FVF+I P+YP L G G+AF+I  T      L +Q LGL   + +++   +  ++
Sbjct: 669  FSFSTTFVFAIHPQYPTLSGHGIAFVIAPTRGLPGALPSQHLGL--FSDANNGNSTNHIV 726

Query: 125  AVEFDIIQNTELIDINDNHVGIDISSLISSASEPASYYSGNNHRIPIL-LRSGDPIQAWV 183
            AVE D IQN EL DINDNHVGIDI+ L S  + PA Y++  N     L L SG P+Q WV
Sbjct: 727  AVELDTIQNEELGDINDNHVGIDINGLKSDKAAPAGYFASKNGDFKNLSLISGRPMQVWV 786

Query: 184  DYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLITASHNVHGW 243
            DY++ E  I+V + P+ V KP  PL+SLP DLS +++  MY GFS+STG +  SH + GW
Sbjct: 787  DYNALEKQIDVRLAPVSVDKPDIPLLSLPRDLSLILNNTMYVGFSSSTGSVLTSHYLLGW 846

Query: 244  SISIGGKAQDLNPMKVPTLEKRSHEVVQRRGF-SVGITLAGMAFLILIIAGAIHVLQRIK 302
            S  + G+AQ L   ++P L +   +  ++  F + G+ +  +  ++ +++GA+++++R K
Sbjct: 847  SFKMNGQAQPLAISQLPKLPRIGGQ--KKSAFLTSGLPVICVVSILAVMSGAVYLIRRKK 904

Query: 303  YADKMLEDWEIQCGARRFKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKR 362
               + LEDWE+  G  RFKY +L   TKGF ++ L+GSGGFGRVYRG++P+  LE+A+K+
Sbjct: 905  KFAEELEDWELDYGPHRFKYKDLYFATKGFKDKELLGSGGFGRVYRGVLPTSKLEIAVKK 964

Query: 363  IGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKD 422
            I H S+QGMKEFVAEI+S+GRLRHRN+V L G+CR++ ELLLVYDY+PNGSLDK L+D+ 
Sbjct: 965  ISHESRQGMKEFVAEIVSIGRLRHRNIVSLLGYCRRKGELLLVYDYMPNGSLDKYLYDQP 1024

Query: 423  HKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLA 482
               +  L W+QR+++L G+A  L YLH E  Q VVHRDVK SN+LLD  LN +LGDFGLA
Sbjct: 1025 ---KVTLNWNQRFRVLKGVASGLSYLHGEWEQVVVHRDVKASNVLLDGELNGRLGDFGLA 1081

Query: 483  KIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAA 542
            ++Y+HG +PQTTH+VGTLGYLAPE TRTGKATT TDVY++G  +LEVACGRR I P +  
Sbjct: 1082 RLYDHGTDPQTTHVVGTLGYLAPEHTRTGKATTRTDVYAFGAFLLEVACGRRPIAPME-- 1139

Query: 543  AELLLVDWVKELHLEGEITQAIDQTLDY-YDLAEAELVLNLGLFCSAPNPVYRPDMRRVV 601
             +L+LVDWV      GEI QA D  L   Y+  E ELVL LGL CS   P  RP M +VV
Sbjct: 1140 -DLILVDWVFFFWNRGEILQASDPKLGVDYNAEEMELVLKLGLMCSHSEPNARPSMPQVV 1198

Query: 602  EFLLGDSSLPPLPPDIHLKDTRNIMGFSDFPNDSDF 637
            ++L       PLP    L  + N + F+      DF
Sbjct: 1199 QYL---ERTVPLPEFTSLGLSANGLSFAHREGFDDF 1231

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449439978|ref|XP_004137762.1| PREDICTED: L-type lectin-domain containing receptor kinase S.4-like [Cucumis sativus] gi|449524894|ref|XP_004169456.1| PREDICTED: L-type lectin-domain containing receptor kinase S.4-like [Cucumis sativus]

 Score =  595 bits (1534), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 311/658 (47%), Positives = 439/658 (66%), Gaps = 32/658 (4%)

Query: 6   ADTTSFLYNGF-----LHANLSLEGAAYISTSGILTVTNKSEGLIGHALYPNPLRFKTSN 60
           A +    ++GF     + ANL+L   A I  +GIL +TN +  L GHA Y +P+RFK S+
Sbjct: 19  AASQQLYFSGFQDDAAVAANLTLTDIAKIEQNGILKLTNDTSRLQGHAFYSSPVRFKNSS 78

Query: 61  KSVAIDFRTNFVFSILPKYPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTKFS 120
                 F T FV +++P+YP LGG GLAF I + ++    L +Q+LGL N        F+
Sbjct: 79  DGKVFSFSTAFVIAVVPEYPTLGGHGLAFTI-APSKNLRGLPSQYLGLLN--AKDVGNFT 135

Query: 121 TRMLAVEFDIIQNTELIDINDNHVGIDISSLISSASEPASYYSGNN-HRIPILLRSGDPI 179
             + AVEFD +Q+ E  DINDNHVGI+++ +IS+ S  ASY+  +   +  + L+SG PI
Sbjct: 136 NHLFAVEFDTVQDFEFADINDNHVGINLNHMISNVSTTASYFVDDGPTKQNLTLKSGRPI 195

Query: 180 QAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLITASHN 239
           QAWVDY S    + V++ P    KP +P++S  +DLS ++DE+MY GFSASTGL+ +SH 
Sbjct: 196 QAWVDYDSSVNSLTVALSPSST-KPKKPILSFNVDLSPILDEFMYVGFSASTGLLASSHY 254

Query: 240 VHGWSISIGGKAQDLNPMKVPTLE--KRSHEVVQRRGFSVGITLAGMAFLILIIAGAIHV 297
           V GWS S+ G+A+ L+   +P++   K+ H       F++GI++A +  +I+ I  A+ +
Sbjct: 255 VLGWSFSMNGQARSLDLSSLPSVPGPKKKHTA-----FTIGISVAAVLIVIIAICVAVLI 309

Query: 298 LQRIKYADKMLEDWEIQCGARRFKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLE 357
           + +IK AD ++E WE + G  R+ Y EL   TK F ++ L+G GGFG+VY+G +P+  ++
Sbjct: 310 IWKIKNAD-IIEAWEHEIGPHRYSYKELKKATKRFRDKELLGRGGFGKVYKGTLPNSKIQ 368

Query: 358 VAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSLDKL 417
           VA+KRI H S+QG++EFV+EI S+GRLRHRNLVQL GWCR++ +LLLVYD++ NGSLD  
Sbjct: 369 VAVKRISHESKQGLREFVSEIASIGRLRHRNLVQLLGWCRRRGDLLLVYDFMANGSLDNY 428

Query: 418 LFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLG 477
           +FD D  +   L+W QR+ I+ G+A  LLYLHE   Q V+HRDVK SN+LLD+ +N KLG
Sbjct: 429 IFD-DPDVN--LSWQQRFGIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSEMNGKLG 485

Query: 478 DFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIE 537
           DFGLA++YEHGANP TT +VGTLGYLAPEL RTGKATTS+DVY++G L+LEVACGRR I+
Sbjct: 486 DFGLARLYEHGANPSTTRVVGTLGYLAPELPRTGKATTSSDVYAFGALLLEVACGRRPID 545

Query: 538 PQKAAAELLLVDWVKELHLEGEITQAIDQTLDY-YDLAEAELVLNLGLFCSAPNPVYRPD 596
           P+ ++ EL+LVDWV E + EG++   +D  L   +++ EA ++L LGLFCS  +   RP 
Sbjct: 546 PKSSSEELVLVDWVWENYREGKLLDVMDPKLKGDFNVVEAMMILKLGLFCSNDSAAARPS 605

Query: 597 MRRVVEFLLGDSSLPP--LPPDIHLKDTRNIMGFSDFPNDSDFFNSKLMSSQSNSFTS 652
           MR+VV FL G+  +P     P + ++  RN  GF DF N          SS  N F+S
Sbjct: 606 MRQVVRFLEGEMGVPEEISAPKV-MEGGRNGEGFDDFVN-------SFASSSFNKFSS 655

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225449434|ref|XP_002278015.1| PREDICTED: L-type lectin-domain containing receptor kinase S.4 [Vitis vinifera]

 Score =  592 bits (1525), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 300/606 (49%), Positives = 409/606 (67%), Gaps = 17/606 (2%)

Query: 11  FLYNGFLHA--NLSLEGAAYISTSGILTVTNKSEGLIGHALYPNPLRFKTSNKSVAIDFR 68
           F Y+ F  A  NLSL G A I  +G+L +TN      G   YP+P+RFK S+   A  F 
Sbjct: 26  FFYDSFHGAGNNLSLNGVAKIEKNGMLRLTNDVARWFGRGFYPSPIRFKNSSGGKAFSFS 85

Query: 69  TNFVFSILPKYPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTKFSTRMLAVEF 128
           T F F+I+P+YP LGG GLAF I ST      L  Q+LGL N T + ++  +  + AVEF
Sbjct: 86  TAFAFAIVPQYPTLGGHGLAFAITSTKELPGALPRQYLGLLNATDNGNS--TNHVFAVEF 143

Query: 129 DIIQNTELIDINDNHVGIDISSLISSASEPASYYSGNNHRIPILLRSGDPIQAWVDYSSQ 188
           D +Q+ E  DI+DNHVGID++S+ S AS  ASY+S N+ +  + L+ G  IQAW+DY  Q
Sbjct: 144 DTVQDFEFNDISDNHVGIDLNSMTSYASANASYFSDNSTKEYLNLKGGKTIQAWIDYDGQ 203

Query: 189 EMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLITASHNVHGWSISIG 248
              +NV + P    KP  P++S  ++LSS++ E+MY GFSASTGL+ +SH V GW   + 
Sbjct: 204 RDQLNVFLSPHST-KPTSPILSCGVNLSSILKEFMYVGFSASTGLLASSHYVLGWRFKMN 262

Query: 249 GKAQDLNPMKVPTLE--KRSHEVVQRRGFSVGITLAGMAFLILIIAGAIHVLQRIKYADK 306
           G A+ L+   +P L   KR++  +      +G+++A  + ++  +A A +++++IK AD 
Sbjct: 263 GVAESLDLSSLPKLPGPKRNNTPLI-----IGVSVAATSMIVFAVALAFYLIRKIKNAD- 316

Query: 307 MLEDWEIQCGARRFKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN 366
           ++E WE+  G  RF Y EL   T+GF ++ L+G GGFG+VY+G + +   +VA+KRI H 
Sbjct: 317 VIEAWELDIGPHRFSYQELKKATRGFRDKELIGFGGFGKVYKGTLRNSNTQVAVKRISHE 376

Query: 367 SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLR 426
           S+QGM+EFV+EI S+GRLRHRNLVQL GWCR++ +LLLVYDY+PNGSLDK LFD     +
Sbjct: 377 SKQGMREFVSEIASIGRLRHRNLVQLLGWCRRRGDLLLVYDYMPNGSLDKYLFDTS---K 433

Query: 427 KLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE 486
             L+W+QR+KI+ G+A  LLYLHEE  Q V+HRD+K  NILLD+ LN +LGDFGLAK+YE
Sbjct: 434 STLSWEQRFKIIKGVASGLLYLHEEWEQTVIHRDIKAGNILLDSELNGRLGDFGLAKLYE 493

Query: 487 HGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELL 546
           HG+NP TT +VGTLGYLAPELTRTGK T S+DV+++G L+LEV CGRR +E +    EL+
Sbjct: 494 HGSNPSTTRVVGTLGYLAPELTRTGKPTRSSDVFAFGALLLEVVCGRRPVEAKALPEELI 553

Query: 547 LVDWVKELHLEGEITQAIDQTLD-YYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL 605
           LVDWV E   EG I   +D  L   YD  E  +VL LGL CS  +P  RP MR+V+ +L 
Sbjct: 554 LVDWVWERWREGAILDVVDPRLKGEYDEVEVVVVLKLGLMCSNNSPAVRPSMRQVLRYLE 613

Query: 606 GDSSLP 611
           G+ +LP
Sbjct: 614 GEVALP 619

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255559006|ref|XP_002520526.1| kinase, putative [Ricinus communis] gi|223540368|gb|EEF41939.1| kinase, putative [Ricinus communis]

 Score =  590 bits (1521), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 300/613 (48%), Positives = 421/613 (68%), Gaps = 18/613 (2%)

Query: 7   DTTSFLYNGFLHANLSLEGAAYISTSGILTVTNKSEGLIGHALYPNPLRFKTS----NKS 62
           +   F+YNGF  ANLSL GAA I  +G+L +TN S   IGHA +P PL F +S    +++
Sbjct: 26  EADQFIYNGFNGANLSLNGAANIHPNGLLELTNTSHQQIGHAFFPFPLHFNSSLSNNSRT 85

Query: 63  VAIDFRTNFVFSILPKYPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTKFSTR 122
             + F TNFVF+++P+ P L G GLAF I  +   +  +A Q+LGL N T    +  S  
Sbjct: 86  SLVSFSTNFVFAMVPESPGLDGHGLAFAISPSLEFKGAIATQYLGLFNSTTIGLS--SNH 143

Query: 123 MLAVEFDIIQNTELIDINDNHVGIDISSLISSASEPASYYSGNNHRIPIL-LRSGDPIQA 181
           +LA+E D ++N E  DI+ NHVG+D+++L S  S  ASY+S    +   L L SG P+Q 
Sbjct: 144 LLAIELDTVKNPEFGDIDGNHVGVDVNNLTSIQSVSASYFSETEEKNKSLELTSGRPMQM 203

Query: 182 WVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLITASHNVH 241
           W+DY   E L+NV++ P+   KP +PL+S  IDLS+++ E MY GFSASTG ++++H + 
Sbjct: 204 WIDYDEMEKLLNVTLAPIERMKPEKPLLSTNIDLSALLLESMYVGFSASTGSVSSNHYIL 263

Query: 242 GWSISIGGKAQDLNPMKVPTL--EKRSHEVVQRRGFSVGITLAGMAFLILIIAGAIHVLQ 299
           GWS +  G+AQ L+P K+P+L  E++S     +    + + L  +  L++ I+  I++++
Sbjct: 264 GWSFNRSGQAQSLDPSKLPSLPQERKSR---GKLAMKIMLPLVIVIVLLMTISATIYIMR 320

Query: 300 RIKYADKMLEDWEIQCGARRFKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVA 359
             K  +++ EDWE Q G +RF Y +L   TKGF ++ L+G GGFG+VYRG +PS  +EVA
Sbjct: 321 --KRYEEIREDWEQQYGPQRFSYKDLYKATKGFKDKELLGCGGFGKVYRGTLPSSNVEVA 378

Query: 360 IKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSLDKLLF 419
           +K++ H+S+QGMKEFVAEI SMGRLRHRNLVQL G+CR++ EL LVYD++PNGSLDK LF
Sbjct: 379 VKKVSHDSRQGMKEFVAEIASMGRLRHRNLVQLLGYCRRKGELFLVYDHMPNGSLDKFLF 438

Query: 420 DKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDF 479
             +   +  + W +RY+I+ G+A +L YLHEE  Q V+HRDVK SN+LLD  LN +LGDF
Sbjct: 439 SNE---KPNIDWVRRYQIIKGVASALYYLHEEWEQVVLHRDVKASNVLLDADLNGRLGDF 495

Query: 480 GLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQ 539
           GLAK+Y+HG+ PQTTH+VGTLGYLAPELT TGKATTS+DV+++GI MLEVACGR+ ++ +
Sbjct: 496 GLAKLYDHGSTPQTTHVVGTLGYLAPELTTTGKATTSSDVFAFGIFMLEVACGRKPVKSE 555

Query: 540 KAAAELLLVDWVKELHLEGEITQAIDQTL-DYYDLAEAELVLNLGLFCSAPNPVYRPDMR 598
           +   E++LVDWV E    G I   ID  L D Y   E ELVL LGL  +   P  RP +R
Sbjct: 556 RPPEEVILVDWVLECWERGNILGTIDPRLEDSYVAEETELVLKLGLLSTQRIPTARPTIR 615

Query: 599 RVVEFLLGDSSLP 611
           +V+++L G+++LP
Sbjct: 616 QVMQYLDGNATLP 628

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356567976|ref|XP_003552190.1| PREDICTED: L-type lectin-domain containing receptor kinase S.4-like [Glycine max]

 Score =  587 bits (1513), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 311/655 (47%), Positives = 429/655 (65%), Gaps = 30/655 (4%)

Query: 1   MVVVHADTTSFLYNGFLH---ANLSLEGAAYISTSGILTVTNKSEGLIGHALYPNPLRFK 57
           ++ V       LY GF     +NL++ G A I  +GIL +TN S  L+GHA YP+P + K
Sbjct: 15  LIPVSCQVDQLLYAGFKDVGASNLTMNGVAKIEHNGILKLTNDSSRLMGHAFYPSPFQLK 74

Query: 58  TSNKSVAIDFRTNFVFSILPKYPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSST 117
            S     + F ++F  +I+P+YP LGG GLAF I +T++    L +Q+LGL N   S + 
Sbjct: 75  NSTSGKVLSFSSSFALAIVPEYPKLGGHGLAFTI-ATSKDLKALPSQYLGLLN--SSDNG 131

Query: 118 KFSTRMLAVEFDIIQNTELIDINDNHVGIDISSLISSASEPASYYSGNNHRIPILLRSGD 177
             S  + AVEFD +Q+ E  DINDNHVGIDI+S+ S+AS        N   + + L+SG 
Sbjct: 132 NISNHIFAVEFDTVQDFEFGDINDNHVGIDINSMQSNAS-------ANVSLVGLTLKSGK 184

Query: 178 PIQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLITAS 237
           PI AWVDY SQ  LI+V++ P    KP  PL++  +DLS V  + MY GFSASTGL+ +S
Sbjct: 185 PILAWVDYDSQLNLISVALSP-NSSKPKTPLLTFNVDLSPVFHDIMYVGFSASTGLLASS 243

Query: 238 HNVHGWSISIGGKAQDLNPMKVPTLEKRSHEVVQRRGFSVGITLAGMAFLILIIAGAIHV 297
           H + GWS  I G A  L+   +P L +      ++    +G++++    ++L I+  I+ 
Sbjct: 244 HYILGWSFKINGPAPPLDLSSLPQLPQPKK---KQTSLIIGVSVSVFVIVLLAISIGIYF 300

Query: 298 LQRIKYADKMLEDWEIQCGARRFKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLE 357
            ++IK AD ++E WE++ G  R+ Y EL   T+GF ++ L+G GGFGRVY+G +P+  ++
Sbjct: 301 YRKIKNAD-VIEAWELEIGPHRYSYQELKKATRGFKDKELLGQGGFGRVYKGTLPNSKIQ 359

Query: 358 VAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSLDKL 417
           VA+KR+ H S+QG++EFV+EI S+GRLRHRNLVQL GWCR++ +LLLVYD++ NGSLDK 
Sbjct: 360 VAVKRVSHESKQGLREFVSEIASIGRLRHRNLVQLLGWCRRRGDLLLVYDFMANGSLDKY 419

Query: 418 LFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLG 477
           LFD+    + +L W+ R+KI+ G+A +LLYLHE   Q V+HRDVK SN+LLD  LN +LG
Sbjct: 420 LFDEP---KIILNWEHRFKIIKGVASALLYLHEGYEQVVIHRDVKASNVLLDFELNGRLG 476

Query: 478 DFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIE 537
           DFGLA++YEHGANP TT +VGTLGYLAPEL RTGKATTS+DV+++G L+LEVACGRR IE
Sbjct: 477 DFGLARLYEHGANPSTTRVVGTLGYLAPELPRTGKATTSSDVFAFGALLLEVACGRRPIE 536

Query: 538 PQKAAAELLLVDWVKELHLEGEITQAIDQTLD-YYDLAEAELVLNLGLFCSAPNPVYRPD 596
           P+    EL+LVDWV E + +G I   +D  L+ Y+D  E  +VL LGL CS   PV RP 
Sbjct: 537 PKALPEELVLVDWVWEKYKQGRILDLVDPKLNVYFDEKEVIVVLKLGLMCSNDVPVTRPS 596

Query: 597 MRRVVEFLLGDSSLP---PLPPDIHLKDTRNIMGFSDFPNDSDFFNSKLMSSQSN 648
           MR+VV +L G+  +P     P DI   +     GF +F +     +   MSS SN
Sbjct: 597 MRQVVRYLDGEVEVPEDLKKPGDISHHE-----GFDEFLHSLASSSFDKMSSGSN 646

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255584540|ref|XP_002532997.1| kinase, putative [Ricinus communis] gi|223527226|gb|EEF29389.1| kinase, putative [Ricinus communis]

 Score =  587 bits (1512), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 295/615 (47%), Positives = 418/615 (67%), Gaps = 15/615 (2%)

Query: 2   VVVHADTTSFLYNGFLHA---NLSLEGAAYISTSGILTVTNKSEGLIGHALYPNPLRFKT 58
           + V        Y GF H    N+SL G A I  +GI+ +TN++  L+G A Y +P +FK 
Sbjct: 16  IPVSCQLNELYYPGFKHVDTVNISLTGVAEIQKNGIIRLTNETSRLMGQAFYASPFQFKN 75

Query: 59  SNKSVAIDFRTNFVFSILPKYPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTK 118
           S+   A  F T+F  +I P+Y  LGG GLAF I S ++    L +Q+LGL N   S    
Sbjct: 76  SSNGKAFSFSTSFALAIFPEYKKLGGHGLAFTI-SASKDLKGLPSQYLGLLN--ASDLGN 132

Query: 119 FSTRMLAVEFDIIQNTELIDINDNHVGIDISSLISSASEPASYYSGNNHRIPILLRSGDP 178
           F+  +LAVEFD +Q+ E  DINDNHVGIDI++L S+AS  A+YY  +  +  + L++G P
Sbjct: 133 FTNHLLAVEFDTVQDFEFGDINDNHVGIDINNLKSNASAAAAYYINDTSKQDLNLKTGKP 192

Query: 179 IQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLITASH 238
           IQ W+DY S + L+NV+I P    KP  P++S PIDLS + +EYMY GFSASTGL+ +SH
Sbjct: 193 IQVWIDYDSIQNLLNVTISPTS-EKPRLPILSFPIDLSQIFEEYMYVGFSASTGLLASSH 251

Query: 239 NVHGWSISIGGKAQDLNPMKVPTLEKRSHEVVQRRGFSVGITLAGMAFLILIIAGAI-HV 297
            + GWS  + G+A+ L+   +P+L +      +  G ++ + +  +   I+ ++ AI +V
Sbjct: 252 YILGWSFKMDGQARALDLSSLPSLPRGPK--TKHTGLTIAVIVPSVFLAIIALSLAIFYV 309

Query: 298 LQRIKYADKMLEDWEIQCGARRFKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLE 357
           +++I+ AD ++EDWE++ G  R+ Y EL   TKGF  + L+G GGFG+VY+G++P   ++
Sbjct: 310 IRKIRNAD-VIEDWELEIGPHRYSYQELKKATKGFSGKELLGQGGFGQVYKGILPDSKVQ 368

Query: 358 VAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSLDKL 417
           VA+KRI + S QG++EFV+EI S+GRLRHRNLVQL GWCR++D+ LLVYDY+ NGSLD  
Sbjct: 369 VAVKRISNESNQGLREFVSEIASVGRLRHRNLVQLLGWCRRRDDFLLVYDYMANGSLDNF 428

Query: 418 LFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLG 477
           LFD+    + +L W+QR+KI+  +A  LLYLHE   Q V+HRDVK SN+LLD+ L  +LG
Sbjct: 429 LFDEP---KIILNWEQRFKIIKDVASGLLYLHEGYEQVVIHRDVKASNVLLDSELTGRLG 485

Query: 478 DFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIE 537
           DFGLA++YEHG+NP TT +VGTLGYLAPE+ RTGKAT  +DVY++G L+LEVACGRR IE
Sbjct: 486 DFGLARLYEHGSNPGTTRVVGTLGYLAPEMPRTGKATACSDVYAFGALLLEVACGRRPIE 545

Query: 538 PQKAAAELLLVDWVKELHLEGEITQAIDQTLD-YYDLAEAELVLNLGLFCSAPNPVYRPD 596
           P+ +  E++LVDWV E+  +G +   +D  L+  Y+  E  +VL LGL CS   P+ RP 
Sbjct: 546 PKASPEEMVLVDWVWEMFKQGRVLDVVDSRLNGEYNEGEMMMVLTLGLMCSNNAPMARPS 605

Query: 597 MRRVVEFLLGDSSLP 611
           MR+VV++L G+  +P
Sbjct: 606 MRQVVKYLDGEVGMP 620

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225439478|ref|XP_002267692.1| PREDICTED: L-type lectin-domain containing receptor kinase S.4-like [Vitis vinifera]

 Score =  585 bits (1509), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 294/615 (47%), Positives = 417/615 (67%), Gaps = 15/615 (2%)

Query: 6   ADTTSFLYNGFLH---ANLSLEGAAYISTSGILTVTNKSEGLIGHALYPNPLRFKTSNKS 62
           +D   F++ GF      NLSL GA+ I+++G + +TN S+ LIG A Y +PL    ++  
Sbjct: 23  SDNIQFIFQGFKGNSIENLSLNGASVITSTGAIRLTNYSKNLIGRAFYSSPLHMFKTHSQ 82

Query: 63  VAIDFRTNFVFSILPKYPDLGG-QGLAFIIISTNRPENCLANQFLGLPNITMSSSTKFST 121
            A  F T FVF I+P  P +GG  GLAF +  T +        +LGL  +   ++  FS 
Sbjct: 83  NASSFSTTFVFVIVPLDPQIGGGHGLAFTLAPTQQLPGARFENYLGL--LGPENNGNFSN 140

Query: 122 RMLAVEFDIIQNTELIDINDNHVGIDISSLISSASEPASYYSGNNHRI-PILLRSGDPIQ 180
            + AVEFD      + DI+ NHVGIDI+S+ S+ S+ ASYY+   H I P+ L SG PIQ
Sbjct: 141 HVFAVEFDTATGLWVNDIDGNHVGIDINSMNSTVSKAASYYANQTHPIEPLKLESGMPIQ 200

Query: 181 AWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLITASHNV 240
           AW++Y   + ++NV+I PL VPKP RPL+S P+DLS ++ E M+ GFS++TG +  SH +
Sbjct: 201 AWIEYDGTQKIVNVTISPLFVPKPSRPLLSAPVDLSHILKETMFAGFSSATGKLAGSHYI 260

Query: 241 HGWSISIGGKAQDLNPMKVPTLEK-RSHEVVQRRGFSVGITLAG--MAFLILIIAGAIHV 297
            GWS  + G A  LNP ++P+L + +  E +++ G  +G   +   +  L++++  +++ 
Sbjct: 261 LGWSFRMNGVAPPLNPSQLPSLPRPKISEKIRKEGIGIGAVCSATTLVLLVIVVFISLYY 320

Query: 298 LQRIKYADKMLEDWEIQCGARRFKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLE 357
           LQR+KY D +LE+WE+QC + RF Y +L   TKGF +  ++GSGGFG VY+G++P+   E
Sbjct: 321 LQRLKYKD-VLEEWELQC-SHRFPYRDLFKATKGFKDSEILGSGGFGCVYKGVLPATQEE 378

Query: 358 VAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSLDKL 417
           VA+K+I HNS+QG++EF+ EI S+GR+RH++LV LHGWC+ +DELLLVYD++PNGSL  +
Sbjct: 379 VAVKKISHNSRQGIREFIMEIASLGRMRHKHLVHLHGWCKHKDELLLVYDFMPNGSLGDI 438

Query: 418 LFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLG 477
           LF+  HK   +L+W+QR+ IL G+A +LLYLHEE  Q VVHRDVK +N+LLD  +NA+LG
Sbjct: 439 LFN--HKKSGILSWEQRFSILKGVASALLYLHEEWEQVVVHRDVKANNVLLDADMNARLG 496

Query: 478 DFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIE 537
           DFGLA++Y+HG    TTHIVGTLGY+APEL+RTGKATT  D++SYG L+LEVACGR  I+
Sbjct: 497 DFGLARLYDHGEEACTTHIVGTLGYIAPELSRTGKATTHCDMFSYGALLLEVACGRPPID 556

Query: 538 PQKAAAELLLVDWVKELHLEGEITQAIDQTLD-YYDLAEAELVLNLGLFCSAPNPVYRPD 596
           P  ++  +LL+DWV+E    G I +A D  LD  Y + E ELV+ LGL C    P  RP 
Sbjct: 557 PNASSKWVLLLDWVRECWAAGCIVEAADPKLDNEYAVEEMELVMKLGLICCQKMPEARPT 616

Query: 597 MRRVVEFLLGDSSLP 611
           MR V+ +L G  +LP
Sbjct: 617 MREVICYLDGSDNLP 631

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255558978|ref|XP_002520512.1| kinase, putative [Ricinus communis] gi|223540354|gb|EEF41925.1| kinase, putative [Ricinus communis]

 Score =  585 bits (1508), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 300/614 (48%), Positives = 409/614 (66%), Gaps = 15/614 (2%)

Query: 7   DTTSFLYNGFLHANLSLEGAAYISTSGILTVTNKSEGLIGHALYPNPLRFKTS---NKSV 63
           +   F+YNGF  ANLSL G A I  +G+L +TN S  +IG A +P P RF TS   N   
Sbjct: 22  EINQFIYNGFQGANLSLSGIATIHPNGLLELTNTSYQMIGRAFFPLPFRFNTSSSNNFQS 81

Query: 64  AIDFRTNFVFSILPKYPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTKFSTRM 123
           A+ F TNFVF+++P+ P  GG G+AF I  +      +A Q+LGL N T    +  S  +
Sbjct: 82  ALSFSTNFVFAMVPELPTHGGHGIAFAISPSKLCVGSMATQYLGLLNSTTDGLS--SNHL 139

Query: 124 LAVEFDIIQNTELIDINDNHVGIDISSLISSASEPASYYSGNNHRIPIL-LRSGDPIQAW 182
            AVE D  ++ +L D+N NHVGIDI+SL S+ S P +YY     R   L L SGDP+Q W
Sbjct: 140 FAVELDSAKSPDLEDMNANHVGIDINSLKSNESAPVTYYLDKEGRNQTLELNSGDPMQVW 199

Query: 183 VDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLITASHNVHG 242
           +DY  +E L+NV++ P+GV KP RPL+S  ++LS V+ E MY GFSA+TG +++ H + G
Sbjct: 200 IDYKEEEKLLNVTVAPIGVSKPSRPLLSKSLNLSQVLLESMYVGFSAATGSVSSRHYILG 259

Query: 243 WSISIGGKAQDLNPMKVPTLEK--RSHEVVQRRGFSVGITLAGMAFLILIIAGAIHVLQR 300
           WS +  G++Q L+P K+P+L    +S ++  R    + +TL  +  ++  + G + +  R
Sbjct: 260 WSFNKSGESQTLDPSKLPSLPSLAKSRKLNLRLIILLAVTLT-VTIIVTAVLGTMFI--R 316

Query: 301 IKYADKMLEDWEIQCGARRFKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAI 360
            K  +++ EDWE   G +RF Y  L   T+ F +++L+G+GGFG+VYRG++ S   +VA+
Sbjct: 317 RKRYEEIREDWEKAYGPQRFSYEVLYKATRDFRDKDLLGAGGFGKVYRGILSSCNTQVAV 376

Query: 361 KRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFD 420
           K+I HNS QGMKEF+AEI SMGRLRHRNLVQL G+CR++ ELLLVY+Y+PNGSLDK LF 
Sbjct: 377 KKISHNSAQGMKEFIAEIASMGRLRHRNLVQLLGYCRRKGELLLVYEYMPNGSLDKFLFS 436

Query: 421 KDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFG 480
           K       L WDQR++I+ G+A  LLYLH +  Q V+HRDVK SN+LLD   NA+LGDFG
Sbjct: 437 KK---EAKLNWDQRHRIIRGVASGLLYLHHDWEQVVLHRDVKASNVLLDANFNARLGDFG 493

Query: 481 LAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQK 540
           LAK Y+HG NPQTT +VGT+GYLAPEL +TGK TTS+DV+++G  MLE+ACGR+  EP+ 
Sbjct: 494 LAKFYDHGTNPQTTCVVGTVGYLAPELIKTGKPTTSSDVFAFGNFMLEIACGRKPFEPKC 553

Query: 541 AAAELLLVDWVKELHLEGEITQAIDQTLD-YYDLAEAELVLNLGLFCSAPNPVYRPDMRR 599
              E +L DWV E    G+I  + D  L+  Y + E ELVL LGL C+   P  RPDMR+
Sbjct: 554 LPEETILADWVLECWKRGDILSSSDPRLEGNYVVQEMELVLKLGLLCAHSTPAARPDMRQ 613

Query: 600 VVEFLLGDSSLPPL 613
           VV +L  + SLP +
Sbjct: 614 VVNYLDHNVSLPEI 627

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	653
TAIR|locus:2099941	684	AT3G55550 [Arabidopsis thalian	0.894	0.853	0.443	7.4e-137
TAIR|locus:2084375	677	AT3G53810 [Arabidopsis thalian	0.912	0.880	0.448	2e-134
TAIR|locus:2040681	675	RLK "receptor lectin kinase" [	0.905	0.875	0.432	5.9e-128
TAIR|locus:2133229	674	LPK1 "lectin-like protein kina	0.906	0.878	0.440	9.6e-128
TAIR|locus:2119936	669	AT4G29050 [Arabidopsis thalian	0.892	0.871	0.416	1.6e-127
TAIR|locus:2133239	669	AT4G02420 [Arabidopsis thalian	0.895	0.874	0.435	2.9e-126
TAIR|locus:2020608	666	AT1G70110 [Arabidopsis thalian	0.883	0.866	0.418	4.9e-124
TAIR|locus:2168509	674	AT5G59260 [Arabidopsis thalian	0.886	0.859	0.414	1.8e-119
TAIR|locus:2144025	657	AT5G60280 [Arabidopsis thalian	0.892	0.887	0.413	6.4e-115
TAIR|locus:2196608	656	AT1G15530 [Arabidopsis thalian	0.900	0.896	0.390	5.8e-114

TAIR|locus:2099941 AT3G55550 [Arabidopsis thaliana (taxid:3702)]

 Score = 1340 (476.8 bits), Expect = 7.4e-137, P = 7.4e-137
 Identities = 266/600 (44%), Positives = 388/600 (64%)

Query:    11 FLYNGFLHA--NLSLEGAAYISTSGILTVTNKSEGLIGHALYPNPLRFKTSNKSVAIDFR 68
             F + GF  A  NL+L G A I+ +G + +T +++ +IGHA Y  P+RFK    + A+ F 
Sbjct:    26 FSFIGFKKASPNLTLNGVAEIAPTGAIRLTTETQRVIGHAFYSLPIRFKPIGVNRALSFS 85

Query:    69 TNFVFSILPKYPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTKFSTRMLAVEF 128
             T+F  +++P++  LGG GLAF I  T      L +Q+LGL N   SS   FS+   AVEF
Sbjct:    86 TSFAIAMVPEFVTLGGHGLAFAITPTPDLRGSLPSQYLGLLN---SSRVNFSSHFFAVEF 142

Query:   129 DIIQNTELIDINDNHVGIDXXXXXXXXXXXXXYYSGNNHRIPILLRSGDPIQAWVDYSSQ 188
             D +++ E  DINDNHVGID             Y+  N+ +  + L  G  IQAW+DY S 
Sbjct:   143 DTVRDLEFEDINDNHVGIDINSMESSISTPAGYFLANSTKKELFLDGGRVIQAWIDYDSN 202

Query:   189 EMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLITASHNVHGWSISIG 248
             +  ++V + P    KP   L+S  +DLSSV+ + MY GFSASTGL+ +SH + GW+ ++ 
Sbjct:   203 KKRLDVKLSPFS-EKPKLSLLSYDVDLSSVLGDEMYVGFSASTGLLASSHYILGWNFNMS 261

Query:   249 GKAQDLN-PM--KVPTLEKRSHEVVQRRGFSVGITL-AGMAFLILIIAGAIHVLQRIKYA 304
             G+A  L+ P   ++P+  K+  +  +R+   +G++L   +    +++A ++ V++++K  
Sbjct:   262 GEAFSLSLPSLPRIPSSIKKRKK--KRQSLILGVSLLCSLLIFAVLVAASLFVVRKVKDE 319

Query:   305 DKMLEDWEIQCGARRFKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIG 364
             D++ E+WE+  G  RF Y EL   T GFG++ L+GSGGFG+VY+G +P     VA+KRI 
Sbjct:   320 DRV-EEWELDFGPHRFSYRELKKATNGFGDKELLGSGGFGKVYKGKLPGSDEFVAVKRIS 378

Query:   365 HNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXX 424
             H S+QG++EF++E+ S+G LRHRNLVQL GWCR++D+LLLVYD++PNGS           
Sbjct:   379 HESRQGVREFMSEVSSIGHLRHRNLVQLLGWCRRRDDLLLVYDFMPNGSLDMYLFDENPE 438

Query:   425 XXXXXTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKI 484
                  TW QR+KI+ G+A  LLYLHE   Q V+HRD+K +N+LLD+ +N ++GDFGLAK+
Sbjct:   439 VIL--TWKQRFKIIKGVASGLLYLHEGWEQTVIHRDIKAANVLLDSEMNGRVGDFGLAKL 496

Query:   485 YEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAE 544
             YEHG++P  T +VGT GYLAPELT++GK TTSTDVY++G ++LEVACGRR IE      E
Sbjct:   497 YEHGSDPGATRVVGTFGYLAPELTKSGKLTTSTDVYAFGAVLLEVACGRRPIETSALPEE 556

Query:   545 LLLVDWVKELHLEGEITQAIDQTLD-YYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEF 603
             L++VDWV      G+I   +D+ L+  +D  E  +V+ LGL CS  +P  RP MR+VV +
Sbjct:   557 LVMVDWVWSRWQSGDIRDVVDRRLNGEFDEEEVVMVIKLGLLCSNNSPEVRPTMRQVVMY 616

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2084375 AT3G53810 [Arabidopsis thaliana (taxid:3702)]

 Score = 1317 (468.7 bits), Expect = 2.0e-134, P = 2.0e-134
 Identities = 273/609 (44%), Positives = 385/609 (63%)

Query:     1 MVVVHADTTSFLYNGFLH---ANLSLEGAAYISTSGILTVTNKSEGLIGHALYPNPLRFK 57
             +++  +   +F YNGF H    ++SL+G A ++ +G+L +TN S    GHA     +RFK
Sbjct:    17 IMISSSQNLNFTYNGF-HPPLTDISLQGLATVTPNGLLKLTNTSVQKTGHAFCTERIRFK 75

Query:    58 TSNKSVAIDFRTNFVFSILPKYPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSST 117
              S       F T FVF+I  + P L G G+AF++  T      L +Q++GL NI  S++ 
Sbjct:    76 DSQNGNVSSFSTTFVFAIHSQIPTLSGHGIAFVVAPTLGLPFALPSQYIGLFNI--SNNG 133

Query:   118 KFSTRMLAVEFDIIQNTELIDINDNHVGIDXXXXXXXXXXXXXYYSGNNHRIPILLRSGD 177
               +  + AVEFD IQ++E  D NDNHVGID             Y   ++    + L S  
Sbjct:   134 NDTNHIFAVEFDTIQSSEFGDPNDNHVGIDLNGLRSANYSTAGYRDDHDKFQNLSLISRK 193

Query:   178 PIQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLITAS 237
              IQ W+DY ++   I+V++ P    KP +PL+S   DLSS++ E MY GFS++TG + + 
Sbjct:   194 RIQVWIDYDNRSHRIDVTVAPFDSDKPRKPLVSYVRDLSSILLEDMYVGFSSATGSVLSE 253

Query:   238 HNVHGWSISIGGKAQDLNPMKVPTLEKRSHEVVQRRGFSVGITLAGMAFLILIIAGAIHV 297
             H + GWS  + G+A  L+  K+P L +     +    + +G+ L  ++ +  II  A ++
Sbjct:   254 HFLVGWSFRLNGEAPMLSLSKLPKLPRFEPRRISEF-YKIGMPLISLSLIFSIIFLAFYI 312

Query:   298 LQRIKYADKMLEDWEIQCGARRFKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLE 357
             ++R K  ++ L+DWE + G  RF++ EL   TKGF E++L+GSGGFGRVYRG++P+  LE
Sbjct:   313 VRRKKKYEEELDDWETEFGKNRFRFKELYHATKGFKEKDLLGSGGFGRVYRGILPTTKLE 372

Query:   358 VAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSXXXX 417
             VA+KR+ H+S+QGMKEFVAEI+S+GR+ HRNLV L G+CR++ ELLLVYDY+PNGS    
Sbjct:   373 VAVKRVSHDSKQGMKEFVAEIVSIGRMSHRNLVPLLGYCRRRGELLLVYDYMPNGSLDKY 432

Query:   418 XXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLG 477
                          W QR  I+ G+A  L YLHEE  Q V+HRDVK SN+LLD   N +LG
Sbjct:   433 LYNNPETTLD---WKQRSTIIKGVASGLFYLHEEWEQVVIHRDVKASNVLLDADFNGRLG 489

Query:   478 DFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIE 537
             DFGLA++Y+HG++PQTTH+VGTLGYLAPE +RTG+ATT+TDVY++G  +LEV  GRR IE
Sbjct:   490 DFGLARLYDHGSDPQTTHVVGTLGYLAPEHSRTGRATTTTDVYAFGAFLLEVVSGRRPIE 549

Query:   538 PQKAAAE-LLLVDWVKELHLEGEITQAIDQTLDY--YDLAEAELVLNLGLFCSAPNPVYR 594
                A+ +  LLV+WV  L L G I +A D  L    YDL E E+VL LGL CS  +P  R
Sbjct:   550 FHSASDDTFLLVEWVFSLWLRGNIMEAKDPKLGSSGYDLEEVEMVLKLGLLCSHSDPRAR 609

Query:   595 PDMRRVVEF 603
             P MR+V+++
Sbjct:   610 PSMRQVLQY 618

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009555 "pollen development" evidence=IMP

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

TAIR|locus:2040681 RLK "receptor lectin kinase" [Arabidopsis thaliana (taxid:3702)]

 Score = 1256 (447.2 bits), Expect = 5.9e-128, P = 5.9e-128
 Identities = 261/603 (43%), Positives = 372/603 (61%)

Query:     6 ADTTSFLYN-GFLH-ANLSLEGAAYISTSGILTVTNKSEGLIGHALYPNPLRFKTSNKSV 63
             + + +F YN GF    +LS++G   ++ +G+L +TN +    GHA Y  P+RFK S    
Sbjct:    22 SQSLNFAYNNGFNPPTDLSIQGITTVTPNGLLKLTNTTVQKTGHAFYTKPIRFKDSPNGT 81

Query:    64 AIDFRTNFVFSILPKYPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTKFSTRM 123
                F T+FVF+I  +   L G G+AF++           +Q++GL N+  + +   +  +
Sbjct:    82 VSSFSTSFVFAIHSQIAILSGHGIAFVVAPNASLPYGNPSQYIGLFNLANNGNE--TNHV 139

Query:   124 LAVEFDIIQNTELIDINDNHVGIDXXXXXXXXXXXXXYYSGNNHRIPILLRSGDPIQAWV 183
              AVE D I +TE  D NDNHVGID             Y+        + L S  P+Q WV
Sbjct:   140 FAVELDTILSTEFNDTNDNHVGIDINSLKSVQSSPAGYWDEKGQFKNLTLISRKPMQVWV 199

Query:   184 DYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLITASHNVHGW 243
             DY  +   I+V++ P    KP RPL++   DLSSV+ + MY GFS++TG + + H + GW
Sbjct:   200 DYDGRTNKIDVTMAPFNEDKPTRPLVTAVRDLSSVLLQDMYVGFSSATGSVLSEHYILGW 259

Query:   244 SISIGGKAQDLNPMKVPTLEKRSHEVVQRRGFSVGITLAGMAFLILIIAGAIHVLQRI-K 302
             S  +  KA  L   ++P L +   + +    + +G+ L  +  +   I    ++++R  K
Sbjct:   260 SFGLNEKAPPLALSRLPKLPRFEPKRISEF-YKIGMPLISLFLIFSFIFLVCYIVRRRRK 318

Query:   303 YADKMLEDWEIQCGARRFKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKR 362
             +A++ LE+WE + G  RF++ +L   TKGF E+ L+G+GGFG VY+G+MP   LE+A+KR
Sbjct:   319 FAEE-LEEWEKEFGKNRFRFKDLYYATKGFKEKGLLGTGGFGSVYKGVMPGTKLEIAVKR 377

Query:   363 IGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXX 422
             + H S+QGMKEFVAEI+S+GR+ HRNLV L G+CR++ ELLLVYDY+PNGS         
Sbjct:   378 VSHESRQGMKEFVAEIVSIGRMSHRNLVPLLGYCRRRGELLLVYDYMPNGSLDKYLYNTP 437

Query:   423 XXXXXXXTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLA 482
                     W QR K+++G+A  L YLHEE  Q V+HRDVK SN+LLD  LN +LGDFGLA
Sbjct:   438 EVTL---NWKQRIKVILGVASGLFYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLA 494

Query:   483 KIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAA 542
             ++Y+HG++PQTTH+VGTLGYLAPE TRTG+AT +TDV+++G  +LEVACGRR IE Q+  
Sbjct:   495 RLYDHGSDPQTTHVVGTLGYLAPEHTRTGRATMATDVFAFGAFLLEVACGRRPIEFQQET 554

Query:   543 AE-LLLVDWVKELHLEGEITQAIDQTL-DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRV 600
              E  LLVDWV  L  +G+I  A D  +    D  E E+VL LGL CS  +P  RP MR+V
Sbjct:   555 DETFLLVDWVFGLWNKGDILAAKDPNMGSECDEKEVEMVLKLGLLCSHSDPRARPSMRQV 614

Query:   601 VEF 603
             + +
Sbjct:   615 LHY 617

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009751 "response to salicylic acid stimulus" evidence=IEP

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0006995 "cellular response to nitrogen starvation" evidence=RCA

GO:0009617 "response to bacterium" evidence=RCA

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0031347 "regulation of defense response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0035304 "regulation of protein dephosphorylation" evidence=RCA

GO:0042742 "defense response to bacterium" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

GO:0045088 "regulation of innate immune response" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

TAIR|locus:2133229 LPK1 "lectin-like protein kinase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 1254 (446.5 bits), Expect = 9.6e-128, P = 9.6e-128
 Identities = 268/608 (44%), Positives = 373/608 (61%)

Query:     6 ADTTSFLYNGFLH--ANLSLEGAAYISTSGILTVTNKSEGLIGHALYPNPLRFKTSNKSV 63
             + + +F YN F     N+S++G A ++++GIL +T+K+    GHA Y  P+RFK S    
Sbjct:    24 SQSLNFTYNSFHRPPTNISIQGIATVTSNGILKLTDKTVISTGHAFYTEPIRFKDSPNDT 83

Query:    64 AIDFRTNFVFSILPKYPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTKFSTRM 123
                F T FV  I    P + G G+AF I       + +A+Q+LGL + T + +   +  +
Sbjct:    84 VSSFSTTFVIGIYSGIPTISGHGMAFFIAPNPVLSSAMASQYLGLFSSTNNGND--TNHI 141

Query:   124 LAVEFDIIQNTELIDINDNHVGIDXXXXXXXXXXXXXYYSGNNHRIPILLRSGDPIQAWV 183
             LAVEFD I N E  D NDNHVGI+             Y+   N    + L S   +Q WV
Sbjct:   142 LAVEFDTIMNPEFDDTNDNHVGININSLTSVKSSLVGYWDEINQFNNLTLISRKRMQVWV 201

Query:   184 DYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLITASHNVHGW 243
             DY  +   I+V++ P G  KP + L+S+  DLSSV  + MY GFSA+TG + + H V GW
Sbjct:   202 DYDDRTNQIDVTMAPFGEVKPRKALVSVVRDLSSVFLQDMYLGFSAATGYVLSEHFVFGW 261

Query:   244 SISIGGK-AQDLNPMKVPTLEKRSHEVVQR----RGFSVGITLAGMAFLI-LIIAGAIHV 297
             S  + GK A  L   KVP   +     +QR    R     + L  + F++ LI      V
Sbjct:   262 SFMVKGKTAPPLTLSKVPKFPRVGPTSLQRFYKNRMPLFSLLLIPVLFVVSLIFLVRFIV 321

Query:   298 LQRIKYADKMLEDWEIQCGARRFKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLE 357
              +R K+A++  EDWE + G  R ++ +L   TKGF +++L+GSGGFGRVYRG+MP+   E
Sbjct:   322 RRRRKFAEEF-EDWETEFGKNRLRFKDLYYATKGFKDKDLLGSGGFGRVYRGVMPTTKKE 380

Query:   358 VAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSXXXX 417
             +A+KR+ + S+QG+KEFVAEI+S+GR+ HRNLV L G+CR++DELLLVYDY+PNGS    
Sbjct:   381 IAVKRVSNESRQGLKEFVAEIVSIGRMSHRNLVPLLGYCRRRDELLLVYDYMPNGSLDKY 440

Query:   418 XXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLG 477
                          W QR+ ++IG+A  L YLHEE  Q V+HRD+K SN+LLD   N +LG
Sbjct:   441 LYDCPEVTLD---WKQRFNVIIGVASGLFYLHEEWEQVVIHRDIKASNVLLDAEYNGRLG 497

Query:   478 DFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIE 537
             DFGLA++ +HG++PQTT +VGT GYLAP+  RTG+ATT+TDV+++G+L+LEVACGRR IE
Sbjct:   498 DFGLARLCDHGSDPQTTRVVGTWGYLAPDHVRTGRATTATDVFAFGVLLLEVACGRRPIE 557

Query:   538 PQKAAAE-LLLVDWVKELHLEGEITQAIDQTL-DYYDLAEAELVLNLGLFCSAPNPVYRP 595
              +  + E +LLVD V    +EG I  A D  L   YD  E E VL LGL CS  +P  RP
Sbjct:   558 IEIESDESVLLVDSVFGFWIEGNILDATDPNLGSVYDQREVETVLKLGLLCSHSDPQVRP 617

Query:   596 DMRRVVEF 603
              MR+V+++
Sbjct:   618 TMRQVLQY 625

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009625 "response to insect" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

TAIR|locus:2119936 AT4G29050 [Arabidopsis thaliana (taxid:3702)]

 Score = 1252 (445.8 bits), Expect = 1.6e-127, P = 1.6e-127
 Identities = 249/598 (41%), Positives = 373/598 (62%)

Query:    11 FLYNGFLHANLSLEGAAYISTSGILTVTNKSEGLIGHALYPNPLRFKTSNKSVAIDFRTN 70
             F +NG+L+ N    G A  ++ G++ +TN SE   GH  Y +P+RFK S       F T 
Sbjct:    28 FGFNGYLYDN---SGIAITNSKGLMKLTNSSEFSYGHVFYNSPVRFKNSPNGTVSSFSTT 84

Query:    71 FVFSILPKYPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTKFSTRMLAVEFDI 130
             FVF+I+     L G GLAF+I  T       ++Q+LGL N+T +     S  ++AVEFD 
Sbjct:    85 FVFAIVSNVNALDGHGLAFVISPTKGLPYSSSSQYLGLFNLTNNGDP--SNHIVAVEFDT 142

Query:   131 IQNTELIDINDNHVGIDXXXXXXXXXXXXXYYSGNNHRIP-ILLRSGDPIQAWVDYSSQE 189
              QN E  D+++NHVGID             YY  ++     I L +  PIQAW++Y S  
Sbjct:   143 FQNQEFDDMDNNHVGIDINSLSSEKASTAGYYEDDDGTFKNIRLINQKPIQAWIEYDSSR 202

Query:   190 MLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLITASHNVHGWSISIGG 249
               +NV+I P+ +PKP  PL+SL  DLS  + + MY GF+++TG + +SH + GW+  + G
Sbjct:   203 RQLNVTIHPIHLPKPKIPLLSLTKDLSPYLFDSMYVGFTSATGRLRSSHYILGWTFKLNG 262

Query:   250 KAQDLNPMKVPTLEKRSHEVVQRRGFSVGITLAGMAFLILIIAGAIHVLQRIKYADKMLE 309
              A +++  ++P L + S     ++  ++ ++L  +A L+ +    +  L+R K  + +LE
Sbjct:   263 TASNIDISRLPKLPRDSRSTSVKKILAISLSLTSLAILVFLTISYMLFLKRKKLME-VLE 321

Query:   310 DWEIQCGARRFKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQ 369
             DWE+Q G  RF Y +L   TKGF    L+G GGFG+VY+G + +  +++A+K++ H+S+Q
Sbjct:   322 DWEVQFGPHRFAYKDLYIATKGFRNSELLGKGGFGKVYKGTLSTSNMDIAVKKVSHDSRQ 381

Query:   370 GMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXX 429
             GM+EFVAEI ++GRLRH NLV+L G+CR++ EL LVYD +P GS                
Sbjct:   382 GMREFVAEIATIGRLRHPNLVRLLGYCRRKGELYLVYDCMPKGSLDKFLYHQPEQSLD-- 439

Query:   430 TWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGA 489
              W QR+KI+  +A  L YLH +  Q ++HRD+KP+N+LLD  +N KLGDFGLAK+ EHG 
Sbjct:   440 -WSQRFKIIKDVASGLCYLHHQWVQVIIHRDIKPANVLLDDSMNGKLGDFGLAKLCEHGF 498

Query:   490 NPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAA-AELLLV 548
             +PQT+++ GT GY++PEL+RTGKA+TS+DV+++GILMLE+ CGRR + P+ ++ +E++L 
Sbjct:   499 DPQTSNVAGTFGYISPELSRTGKASTSSDVFAFGILMLEITCGRRPVLPRASSPSEMVLT 558

Query:   549 DWVKELHLEGEITQAIDQTL---DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEF 603
             DWV +   E +I Q +D+ +   D Y   +  LVL LGLFCS P    RP M  V++F
Sbjct:   559 DWVLDCW-EDDILQVVDERVKQDDKYLEEQVALVLKLGLFCSHPVAAVRPSMSSVIQF 615

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=ISS

TAIR|locus:2133239 AT4G02420 [Arabidopsis thaliana (taxid:3702)]

 Score = 1240 (441.6 bits), Expect = 2.9e-126, P = 2.9e-126
 Identities = 262/601 (43%), Positives = 374/601 (62%)

Query:    11 FLYNGFLH--ANLSLEGAAYISTSGILTVTNKSEGLIGHALYPNPLRFKTSNKSVAIDFR 68
             F YNGF     ++S+ G A I+ +G+L +TN +    GHA Y  P+RFK S       F 
Sbjct:    28 FTYNGFRPPPTDISILGIATITPNGLLKLTNTTMQSTGHAFYTKPIRFKDSPNGTVSSFS 87

Query:    69 TNFVFSILPKYPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTKFSTRMLAVEF 128
             T FVF+I  + P     G+AF+I    R       Q+LGL N+T + + +    + AVE 
Sbjct:    88 TTFVFAIHSQIPI--AHGMAFVIAPNPRLPFGSPLQYLGLFNVTNNGNVR--NHVFAVEL 143

Query:   129 DIIQNTELIDINDNHVGIDXXXXXXXXXXXXXYYSGNNHRIPILLRSGDPIQAWVDYSSQ 188
             D I N E  D N+NHVGID             Y+  N+    + L S   +Q WVD+   
Sbjct:   144 DTIMNIEFNDTNNNHVGIDINSLNSVKSSPAGYWDENDQFHNLTLISSKRMQVWVDFDGP 203

Query:   189 EMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLITASHNVHGWSISIG 248
               LI+V++ P G  KP +PL+S+  DLSSV+ + M+ GFS++TG I +   V GWS  + 
Sbjct:   204 THLIDVTMAPFGEVKPRKPLVSIVRDLSSVLLQDMFVGFSSATGNIVSEIFVLGWSFGVN 263

Query:   249 GKAQDLNPMKVPTL---EKRSHEVVQ-RRGFSVGITLAGMAFLILIIAGAIHVLQRIKYA 304
             G+AQ L   K+P L   + +   V +  + +   I+L  + FL++I      + +R K+A
Sbjct:   264 GEAQPLALSKLPRLPVWDLKPTRVYRFYKNWVPLISLLLIPFLLIIFLVRFIMKRRRKFA 323

Query:   305 DKMLEDWEIQCGARRFKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIG 364
             +++ EDWE + G  R ++ +L   TKGF ++N++GSGGFG VY+G+MP    E+A+KR+ 
Sbjct:   324 EEV-EDWETEFGKNRLRFKDLYYATKGFKDKNILGSGGFGSVYKGIMPKTKKEIAVKRVS 382

Query:   365 HNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXX 424
             + S+QG+KEFVAEI+S+G++ HRNLV L G+CR++DELLLVYDY+PNGS           
Sbjct:   383 NESRQGLKEFVAEIVSIGQMSHRNLVPLVGYCRRRDELLLVYDYMPNGSLDKYLYNSPEV 442

Query:   425 XXXXXTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKI 484
                   W QR+K++ G+A +L YLHEE  Q V+HRDVK SN+LLD  LN +LGDFGLA++
Sbjct:   443 TLD---WKQRFKVINGVASALFYLHEEWEQVVIHRDVKASNVLLDAELNGRLGDFGLAQL 499

Query:   485 YEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAE 544
              +HG++PQTT +VGT GYLAP+  RTG+ATT+TDV+++G+L+LEVACGRR IE    + E
Sbjct:   500 CDHGSDPQTTRVVGTWGYLAPDHIRTGRATTTTDVFAFGVLLLEVACGRRPIEINNQSGE 559

Query:   545 -LLLVDWVKELHLEGEITQAIDQTL-DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVE 602
              ++LVDWV    +E  I  A D  L   YD  E E+VL LGL CS  +P+ RP MR+V++
Sbjct:   560 RVVLVDWVFRFWMEANILDAKDPNLGSEYDQKEVEMVLKLGLLCSHSDPLARPTMRQVLQ 619

Query:   603 F 603
             +
Sbjct:   620 Y 620

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2020608 AT1G70110 [Arabidopsis thaliana (taxid:3702)]

 Score = 1219 (434.2 bits), Expect = 4.9e-124, P = 4.9e-124
 Identities = 245/586 (41%), Positives = 359/586 (61%)

Query:    20 NLSLEGAAYISTSGILTVTNKSEGLIGHALYPNPLRFKTSNKSVAIDFRTNFVFSILPKY 79
             N+   G+AYI+ +G++ +TN +    G   Y + LRFK S       F T FVFSI    
Sbjct:    33 NMYTSGSAYINNNGLIRLTNSTPQTTGQVFYNDQLRFKNSVNGTVSSFSTTFVFSIEFHN 92

Query:    80 PDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTKFSTRMLAVEFDIIQNTELIDI 139
                GG G+AF+I  T          +LGL N +     K    ++AVE D   + +  D 
Sbjct:    93 GIYGGYGIAFVICPTRDLSPTFPTTYLGLFNRSNMGDPK--NHIVAVELDTKVDQQFEDK 150

Query:   140 NDNHVGIDXXXXXXXXXXXXXYYSGNNHRIPILLRSGDPIQAWVDYSSQEMLINVSICPL 199
             + NHVGID             YY  N     +LL SG P+Q W++Y S++  INV++ PL
Sbjct:   151 DANHVGIDINTLVSDTVALAGYYMDNGTFRSLLLNSGQPMQIWIEYDSKQKQINVTLHPL 210

Query:   200 GVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLITASHNVHGWSISIGGKAQDLNPMKV 259
              VPKP  PL+SL  DLS  + E MY GF+++TG +TASH + GW+  + G   D++P ++
Sbjct:   211 YVPKPKIPLLSLEKDLSPYLLELMYVGFTSTTGDLTASHYILGWTFKMNGTTPDIDPSRL 270

Query:   260 PTLEKRSHEVVQR-RGF-SVGITLAGMAFLILIIAGAIHVLQRIKYADKMLEDWEIQCGA 317
             P + + +   +Q   G  ++ +T++G+  LI++       L+R K  + +LEDWE+Q G 
Sbjct:   271 PKIPRYNQPWIQSPNGILTISLTVSGVIILIILSLSLWLFLKRKKLLE-VLEDWEVQFGP 329

Query:   318 RRFKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAE 377
              RF + +L   TKGF +  ++G GGFG+VY+G +P   +E+A+K + H+S+QGM+EF+AE
Sbjct:   330 HRFAFKDLHIATKGFKDTEVLGKGGFGKVYKGTLPVSNVEIAVKMVSHDSRQGMREFIAE 389

Query:   378 IMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKI 437
             I ++GRLRH NLV+L G+CR + EL LVYD +  GS                 W QR+KI
Sbjct:   390 IATIGRLRHPNLVRLQGYCRHKGELYLVYDCMAKGSLDKFLYHQQTGNLD---WSQRFKI 446

Query:   438 LIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIV 497
             +  +A  L YLH++  Q ++HRD+KP+NILLD  +NAKLGDFGLAK+ +HG +PQT+H+ 
Sbjct:   447 IKDVASGLYYLHQQWVQVIIHRDIKPANILLDANMNAKLGDFGLAKLCDHGTDPQTSHVA 506

Query:   498 GTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLE 557
             GTLGY++PEL+RTGKA+T +DV+++GI+MLE+ACGR+ I P+ +  E++L DWV E    
Sbjct:   507 GTLGYISPELSRTGKASTRSDVFAFGIVMLEIACGRKPILPRASQREMVLTDWVLECWEN 566

Query:   558 GEITQAIDQTLDY-YDLAEAELVLNLGLFCSAPNPVYRPDMRRVVE 602
              +I Q +D  +   Y   +A LVL LGLFCS P    RP+M  V++
Sbjct:   567 EDIMQVLDHKIGQEYVEEQAALVLKLGLFCSHPVAAIRPNMSSVIQ 612

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=ISS

TAIR|locus:2168509 AT5G59260 [Arabidopsis thaliana (taxid:3702)]

 Score = 1176 (419.0 bits), Expect = 1.8e-119, P = 1.8e-119
 Identities = 252/608 (41%), Positives = 364/608 (59%)

Query:    11 FLYNGFLHANLSLEGAAYISTSGILTVTNKSEGLIGHALYPNPLRFKTSNKSVAIDFRTN 70
             F+Y  F +A+L L+G A  +  G L +TN +    GHA Y  P++F  S+ S +  F T 
Sbjct:    30 FVYYDFRNADLELDGMAN-TNHGPLHLTNNTNTGTGHAFYNIPIKFTASSLS-SFSFSTE 87

Query:    71 FVFSILPKYPDLGGQGLAFIIIST-NRPENCLANQFLGLPNITMSSSTKFSTRMLAVEFD 129
             FVF+I P      G G+AF++  T +   N  AN  LG+ N   ++  K +T + AVE D
Sbjct:    88 FVFAIFPLQKSTYGHGMAFVVSPTKDLRSNGSANSNLGIFN--RANDNKTATHIFAVELD 145

Query:   130 IIQNTELIDINDNHVGIDXXXXXXXXXXXXXYYSGNNHR-IPILLRSGDPIQAWVDYSSQ 188
               QN+E  D   N VGID             Y++    + I + L SG  I  W+DY   
Sbjct:   146 TNQNSESFDKGGNDVGIDINSIVSVESADASYFNARKGKNISLPLASGKSILVWIDYDGI 205

Query:   189 EMLINVSICPLGVPKP---YR--------PLISLPIDLSSVIDEYMYTGFSASTGLITAS 237
             E ++NV++ P+  PKP   Y         PL+S  I+LS +  E MY GFS STG I ++
Sbjct:   206 EKVLNVTLAPVQTPKPDSPYFSSFIKPKVPLLSRSINLSEIFTETMYVGFSGSTGSIKSN 265

Query:   238 HNVHGWSISIGGKAQ--DLNPMKVPTLEKRSHEVVQRRGFSVGITLAGMAFLILIIAGAI 295
               + GWS   GGKA+  D++ +  P    +   + +     +G T++ +AFL L   G +
Sbjct:   266 QYILGWSFKQGGKAESLDISRLSNPPPSPKRFPLKE----VLGATISTIAFLTL--GGIV 319

Query:   296 HVLQRIKYADKMLEDWEIQCGARRFKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLG 355
             ++ ++ KYA+ +LE WE +   +R+ +  L   TKGF E  L+G+GGFG+VY+G++PS G
Sbjct:   320 YLYKKKKYAE-VLEQWEKEYSPQRYSFRILYKATKGFRENQLLGAGGFGKVYKGILPS-G 377

Query:   356 LEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSXX 415
              ++A+KR+ H+++QGMK++VAEI SMGRLRH+NLV L G+CR++ ELLLVYDY+PNGS  
Sbjct:   378 TQIAVKRVYHDAEQGMKQYVAEIASMGRLRHKNLVHLLGYCRRKGELLLVYDYMPNGSLD 437

Query:   416 XXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAK 475
                           TW QR  I+ G+A +LLYLHEE  Q V+HRD+K SNILLD  LN K
Sbjct:   438 DYLFHKNKLKDL--TWSQRVNIIKGVASALLYLHEEWEQVVLHRDIKASNILLDADLNGK 495

Query:   476 LGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRS 535
             LGDFGLA+ ++ G N + T +VGT+GY+APELT  G  TT TDVY++G  +LEV CGRR 
Sbjct:   496 LGDFGLARFHDRGVNLEATRVVGTIGYMAPELTAMGVTTTCTDVYAFGAFILEVVCGRRP 555

Query:   536 IEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRP 595
             ++P     +++LV WV        +T  +D  L  + + EA+L+L LG+ CS  NP  RP
Sbjct:   556 VDPDAPREQVILVKWVASCGKRDALTDTVDSKLIDFKVEEAKLLLKLGMLCSQINPENRP 615

Query:   596 DMRRVVEF 603
              MR+++++
Sbjct:   616 SMRQILQY 623

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2144025 AT5G60280 [Arabidopsis thaliana (taxid:3702)]

 Score = 1133 (403.9 bits), Expect = 6.4e-115, P = 6.4e-115
 Identities = 252/610 (41%), Positives = 361/610 (59%)

Query:     1 MVVVHADT---TSFLYNGFLHANLSLEGAAYISTSGILTVTNKSEGLIGHALYPNPLRFK 57
             ++++H  +   T F +NGF   +L ++G A I   G+L +T+ SE   GHA +  PL F 
Sbjct:    15 LLLIHLSSQQETGFSFNGFRQGDLHVDGVAQILPGGLLRLTDTSEQKKGHAFFRQPLVF- 73

Query:    58 TSNKSVAIDFRTNFVFSILPKYPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSST 117
               N S  + F T+FV +++ K    GG G+AF +  +    N  A Q+LGL N T + S 
Sbjct:    74 --NSSEPLSFSTHFVCAMVRKPGVTGGNGIAFFLSPSMDLTNADATQYLGLFNTTTNRSP 131

Query:   118 KFSTRMLAVEFDIIQNTELIDINDNHVGIDXXXXXXXXXXXXXYYS---GNNHRIPILLR 174
               S+ + A+E D +Q+ E  DI++NHVGID             Y+S   G N  I +L  
Sbjct:   132 --SSHIFAIELDTVQSAEFDDIDNNHVGIDVNSLTSVESAPASYFSDKKGLNKSISLL-- 187

Query:   175 SGDPIQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLI 234
             SGD IQ WVD+     ++NVS+ PLG+ KP + LIS  ++LS VI + M+ GFSA+TG +
Sbjct:   188 SGDSIQVWVDFDGT--VLNVSLAPLGIRKPSQSLISRSMNLSEVIQDRMFVGFSAATGQL 245

Query:   235 TASHNVHGWSISIGGKAQDLNPMKVPTLEKRSHEVVQRRGFSVGITLA-GMAFLILIIAG 293
               +H + GWS S   KA  L  + +  L +  H  ++     + + +  G+  L+L++ G
Sbjct:   246 ANNHYILGWSFS-RSKAS-LQSLDISKLPQVPHPKMKTSLLLILLLIVLGIILLVLLV-G 302

Query:   294 AIHVLQRIKYADKMLEDWEIQCGARRFKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPS 353
             A ++ +R KYA+ + E+WE + G  R+ Y  L   TKGF +   +G GGFG VY+G +P 
Sbjct:   303 A-YLYRRNKYAE-VREEWEKEYGPHRYSYKSLYKATKGFHKDGFLGKGGFGEVYKGTLPQ 360

Query:   354 LGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGS 413
                ++A+KR  H+ ++GMK+FVAEI SMG L HRNLV L G+CR++ E LLV  Y+PNGS
Sbjct:   361 E--DIAVKRFSHHGERGMKQFVAEIASMGCLDHRNLVPLFGYCRRKGEFLLVSKYMPNGS 418

Query:   414 XXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLN 473
                             TW +R  IL GIA +L YLH E  Q V+HRD+K SN++LDT   
Sbjct:   419 LDQFLFHNREPSL---TWSKRLGILKGIASALKYLHTEATQVVLHRDIKASNVMLDTDFT 475

Query:   474 AKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGR 533
              KLGDFG+A+ ++HGANP TT  VGT+GY+ PELT  G A+T TDVY++G L+LEV CGR
Sbjct:   476 GKLGDFGMARFHDHGANPTTTGAVGTVGYMGPELTSMG-ASTKTDVYAFGALILEVTCGR 534

Query:   534 RSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVY 593
             R +EP     + LLV WV +     ++  A D  L    + + E+VL LGL C+   P  
Sbjct:   535 RPVEPNLPIEKQLLVKWVCDCWKRKDLISARDPKLSGELIPQIEMVLKLGLLCTNLVPES 594

Query:   594 RPDMRRVVEF 603
             RPDM +VV++
Sbjct:   595 RPDMVKVVQY 604

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2196608 AT1G15530 [Arabidopsis thaliana (taxid:3702)]

 Score = 1124 (400.7 bits), Expect = 5.8e-114, P = 5.8e-114
 Identities = 243/623 (39%), Positives = 374/623 (60%)

Query:     1 MVVVHADTTS----FLYNGFLHAN-----LSLEGAAYISTSGILTVTNKSEGL-IGHALY 50
             ++V+H  ++S    FLYN F         + +E +   ST  ++++ N S+ L  G   Y
Sbjct:    18 LIVLHLVSSSSAIDFLYNSFSSVTNRTDVILIEDSRVEST--VISLINDSDPLSFGRVFY 75

Query:    51 PNPLRF---KTSNKSVAIDFRTNFVFSILPKYPDLGGQGLAFIIISTNRPENCLANQFLG 107
             P  L      T N +    F T+FVFSILP      G GL F++ ++  P N +++Q+ G
Sbjct:    76 PQKLTIIPDPTRNPTRLSSFSTSFVFSILPDISTSPGFGLCFVLSNSTSPPNAISSQYFG 135

Query:   108 LPNITMSSSTKFSTRMLAVEFDIIQNTELIDINDNHVGIDXXXXXXXXXXXXXYY-SGNN 166
             L   T +++ +F+  +LAVEFD  +N+E+ DI+DNHVGID             YY S N 
Sbjct:   136 L--FT-NATVRFNAPLLAVEFDTGRNSEVNDIDDNHVGIDLNNIESTTSVTAGYYDSVNG 192

Query:   167 HRIPILLRSGDPIQAWVDYSSQEMLINVSICPLGVPKPYRPLISL--PIDLSSVIDEYMY 224
               +   +R+G+ ++AW+D+      INVS+ P+GV +P RP ++   P+ +++ +   MY
Sbjct:   193 SFVRFNMRNGNNVRAWIDFDGPNFQINVSVAPVGVLRPRRPTLTFRDPV-IANYVSADMY 251

Query:   225 TGFSASTGLITASHNVHGWSISIGGKAQDLNPMKVPT--LEKRSHEVVQRRGFSVGITLA 282
              GFSAS      +  +  WS+S  G  +++N   +P   LE  S  +    G   GI + 
Sbjct:   252 AGFSASKTNWNEARRILAWSLSDTGALREINTTNLPVFFLENSSSSL--STGAIAGIVIG 309

Query:   283 GMAFLILIIAGAIHVLQRI--KYADKMLEDWEIQCGARRFKYAELASVTKGFGEQNLVGS 340
              + F+ LI  G   + +++  +  ++ +E+WE++    RF Y ELA+ T+ F    L+GS
Sbjct:   310 CVVFVALIGFGGYLIWKKLMREEEEEEIEEWELEFWPHRFSYEELAAATEVFSNDRLLGS 369

Query:   341 GGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQD 400
             GGFG+VYRG++ S   E+A+K + H+S+QG++EF+AEI SMGRL+H+NLVQ+ GWCR+++
Sbjct:   370 GGFGKVYRGIL-SNNSEIAVKCVNHDSKQGLREFMAEISSMGRLQHKNLVQMRGWCRRKN 428

Query:   401 ELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQRVVHRD 460
             EL+LVYDY+PNGS                 W +R +++  +A+ L YLH   +Q V+HRD
Sbjct:   429 ELMLVYDYMPNGSLNQWIFDNPKEPM---PWRRRRQVINDVAEGLNYLHHGWDQVVIHRD 485

Query:   461 VKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVY 520
             +K SNILLD+ +  +LGDFGLAK+YEHG  P TT +VGTLGYLAPEL      T ++DVY
Sbjct:   486 IKSSNILLDSEMRGRLGDFGLAKLYEHGGAPNTTRVVGTLGYLAPELASASAPTEASDVY 545

Query:   521 SYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTL--DYYDLAEAEL 578
             S+G+++LEV  GRR IE  +   +++LVDWV++L+  G +  A D+ +  +   + E EL
Sbjct:   546 SFGVVVLEVVSGRRPIEYAEEE-DMVLVDWVRDLYGGGRVVDAADERVRSECETMEEVEL 604

Query:   579 VLNLGLFCSAPNPVYRPDMRRVV 601
             +L LGL C  P+P  RP+MR +V
Sbjct:   605 LLKLGLACCHPDPAKRPNMREIV 627

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=ISS

GO:0005773 "vacuole" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9M2S4	LRKS4_ARATH	2, ., 7, ., 1, 1, ., 1	0.4390	0.9709	0.9269	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.7.11.1	0.914
3rd Layer	2.7.11	0.921

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00031525001 SubName- Full=Chromosome chr12 scaffold_57, whole genome shotgun sequence; (647 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	653
cd06899	236	cd06899, lectin_legume_LecRK_Arcelin_ConA, legume	2e-86
pfam00139	231	pfam00139, Lectin_legB, Legume lectin domain	6e-81
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	6e-51
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	9e-49
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	1e-46
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	2e-44
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	5e-44
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	1e-42
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	7e-42
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	1e-40
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	1e-37
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	8e-34
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	3e-30
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	3e-30
cd05063	268	cd05063, PTKc_EphR_A2, Catalytic domain of the Pro	1e-28
cd05033	266	cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec	2e-28
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	2e-28
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	2e-28
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	9e-28
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	2e-27
cd05065	269	cd05065, PTKc_EphR_B, Catalytic domain of the Prot	1e-26
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	2e-26
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	2e-26
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	2e-26
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	2e-26
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	4e-26
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	1e-25
PLN00113	968	PLN00113, PLN00113, leucine-rich repeat receptor-l	1e-25
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	2e-25
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	3e-25
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	7e-25
cd05066	267	cd05066, PTKc_EphR_A, Catalytic domain of the Prot	1e-24
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	3e-24
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	7e-24
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	9e-24
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	1e-23
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	1e-23
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	1e-23
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	4e-23
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	6e-23
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	6e-23
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	1e-22
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	1e-22
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	2e-22
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	4e-22
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	4e-22
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	4e-22
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	6e-22
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	9e-22
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	1e-21
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	1e-21
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	2e-21
cd01951	223	cd01951, lectin_L-type, legume lectins	4e-21
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	4e-21
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	5e-21
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	6e-21
cd05044	269	cd05044, PTKc_c-ros, Catalytic domain of the Prote	6e-21
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	7e-21
cd05083	254	cd05083, PTKc_Chk, Catalytic domain of the Protein	7e-21
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	9e-21
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	1e-20
cd05082	256	cd05082, PTKc_Csk, Catalytic domain of the Protein	1e-20
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	1e-20
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	1e-20
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	2e-20
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	6e-20
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	8e-20
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	8e-20
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	9e-20
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	1e-19
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	1e-19
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	2e-19
cd08528	269	cd08528, STKc_Nek10, Catalytic domain of the Prote	3e-19
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	4e-19
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	4e-19
PLN00009	294	PLN00009, PLN00009, cyclin-dependent kinase A; Pro	5e-19
cd05113	256	cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro	9e-19
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	9e-19
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	1e-18
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	1e-18
cd05111	279	cd05111, PTK_HER3, Pseudokinase domain of the Prot	1e-18
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	2e-18
cd06653	264	cd06653, STKc_MEKK3_like_1, Catalytic domain of MA	2e-18
cd08220	256	cd08220, STKc_Nek8, Catalytic domain of the Protei	2e-18
cd05093	288	cd05093, PTKc_TrkB, Catalytic domain of the Protei	3e-18
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	3e-18
cd05071	262	cd05071, PTKc_Src, Catalytic domain of the Protein	3e-18
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	4e-18
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	6e-18
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	6e-18
cd05088	303	cd05088, PTKc_Tie2, Catalytic domain of the Protei	6e-18
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	7e-18
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	7e-18
cd05070	260	cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro	8e-18
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	1e-17
cd05089	297	cd05089, PTKc_Tie1, Catalytic domain of the Protei	1e-17
cd05094	291	cd05094, PTKc_TrkC, Catalytic domain of the Protei	2e-17
cd06651	266	cd06651, STKc_MEKK3, Catalytic domain of the Prote	3e-17
cd06616	288	cd06616, PKc_MKK4, Catalytic domain of the dual-sp	3e-17
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	4e-17
cd07862	290	cd07862, STKc_CDK6, Catalytic domain of the Serine	4e-17
cd08229	267	cd08229, STKc_Nek7, Catalytic domain of the Protei	5e-17
cd05047	270	cd05047, PTKc_Tie, Catalytic domain of Tie Protein	6e-17
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	6e-17
cd05064	266	cd05064, PTKc_EphR_A10, Catalytic domain of the Pr	1e-16
cd06652	265	cd06652, STKc_MEKK2, Catalytic domain of the Prote	1e-16
cd07843	293	cd07843, STKc_CDC2L1, Catalytic domain of the Seri	1e-16
cd05072	261	cd05072, PTKc_Lyn, Catalytic domain of the Protein	1e-16
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	1e-16
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	1e-16
cd05046	275	cd05046, PTK_CCK4, Pseudokinase domain of the Prot	1e-16
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	2e-16
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	2e-16
cd05085	250	cd05085, PTKc_Fer, Catalytic domain of the Protein	2e-16
cd05110	303	cd05110, PTKc_HER4, Catalytic domain of the Protei	2e-16
cd05115	257	cd05115, PTKc_Zap-70, Catalytic domain of the Prot	2e-16
cd05055	302	cd05055, PTKc_PDGFR, Catalytic domain of the Prote	2e-16
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	3e-16
cd05114	256	cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro	3e-16
cd07839	284	cd07839, STKc_CDK5, Catalytic domain of the Serine	3e-16
cd06643	282	cd06643, STKc_SLK, Catalytic domain of the Protein	4e-16
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	4e-16
cd05092	280	cd05092, PTKc_TrkA, Catalytic domain of the Protei	4e-16
cd07847	286	cd07847, STKc_CDKL1_4, Catalytic domain of the Ser	4e-16
cd06634	308	cd06634, STKc_TAO2, Catalytic domain of the Protei	5e-16
cd06617	283	cd06617, PKc_MKK3_6, Catalytic domain of the dual-	5e-16
cd05069	260	cd05069, PTKc_Yes, Catalytic domain of the Protein	6e-16
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	8e-16
cd07864	302	cd07864, STKc_CDK12, Catalytic domain of the Serin	9e-16
cd05056	270	cd05056, PTKc_FAK, Catalytic domain of the Protein	9e-16
cd08225	257	cd08225, STKc_Nek5, Catalytic domain of the Protei	1e-15
cd05073	260	cd05073, PTKc_Hck, Catalytic domain of the Protein	1e-15
cd05036	277	cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro	1e-15
cd05091	283	cd05091, PTKc_Ror2, Catalytic domain of the Protei	1e-15
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	1e-15
cd06650	333	cd06650, PKc_MEK1, Catalytic domain of the dual-sp	1e-15
cd07849	336	cd07849, STKc_ERK1_2_like, Catalytic domain of Ext	2e-15
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	2e-15
cd06649	331	cd06649, PKc_MEK2, Catalytic domain of the dual-sp	2e-15
cd05058	262	cd05058, PTKc_Met_Ron, Catalytic domain of the Pro	2e-15
cd05090	283	cd05090, PTKc_Ror1, Catalytic domain of the Protei	3e-15
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	3e-15
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	3e-15
cd08223	257	cd08223, STKc_Nek4, Catalytic domain of the Protei	4e-15
cd07863	288	cd07863, STKc_CDK4, Catalytic domain of the Serine	4e-15
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	4e-15
cd06633	313	cd06633, STKc_TAO3, Catalytic domain of the Protei	5e-15
TIGR03903	1266	TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclas	7e-15
cd08228	267	cd08228, STKc_Nek6, Catalytic domain of the Protei	8e-15
cd05108	316	cd05108, PTKc_EGFR, Catalytic domain of the Protei	8e-15
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	8e-15
cd07842	316	cd07842, STKc_CDK8_like, Catalytic domain of Cycli	1e-14
cd05573	350	cd05573, STKc_ROCK_NDR_like, Catalytic domain of R	1e-14
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	1e-14
cd06635	317	cd06635, STKc_TAO1, Catalytic domain of the Protei	1e-14
PTZ00024	335	PTZ00024, PTZ00024, cyclin-dependent protein kinas	1e-14
cd05116	257	cd05116, PTKc_Syk, Catalytic domain of the Protein	1e-14
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	2e-14
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	2e-14
cd06641	277	cd06641, STKc_MST3, Catalytic domain of the Protei	2e-14
cd05097	295	cd05097, PTKc_DDR_like, Catalytic domain of Discoi	2e-14
cd06622	286	cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of	2e-14
cd05050	288	cd05050, PTKc_Musk, Catalytic domain of the Protei	5e-14
cd05630	285	cd05630, STKc_GRK6, Catalytic domain of the Protei	5e-14
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	6e-14
cd05053	293	cd05053, PTKc_FGFR, Catalytic domain of the Protei	6e-14
cd07872	309	cd07872, STKc_PCTAIRE2, Catalytic domain of the Se	6e-14
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	7e-14
cd05575	323	cd05575, STKc_SGK, Catalytic domain of the Protein	8e-14
cd06645	267	cd06645, STKc_MAP4K3, Catalytic domain of the Prot	9e-14
cd06615	308	cd06615, PKc_MEK, Catalytic domain of the dual-spe	1e-13
cd07848	287	cd07848, STKc_CDKL5, Catalytic domain of the Serin	1e-13
cd07873	301	cd07873, STKc_PCTAIRE1, Catalytic domain of the Se	2e-13
cd08219	255	cd08219, STKc_Nek3, Catalytic domain of the Protei	2e-13
PHA03207	392	PHA03207, PHA03207, serine/threonine kinase US3; P	2e-13
cd05603	321	cd05603, STKc_SGK2, Catalytic domain of the Protei	2e-13
cd06619	279	cd06619, PKc_MKK5, Catalytic domain of the dual-sp	2e-13
cd07856	328	cd07856, STKc_Sty1_Hog1, Catalytic domain of the S	2e-13
cd05608	280	cd05608, STKc_GRK1, Catalytic domain of the Protei	3e-13
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	3e-13
cd07858	337	cd07858, STKc_TEY_MAPK_plant, Catalytic domain of	3e-13
cd05586	330	cd05586, STKc_Sck1_like, Catalytic domain of Suppr	4e-13
cd05582	318	cd05582, STKc_RSK_N, N-terminal catalytic domain o	4e-13
cd07870	291	cd07870, STKc_PFTAIRE2, Catalytic domain of the Se	5e-13
cd08218	256	cd08218, STKc_Nek1, Catalytic domain of the Protei	6e-13
cd05600	333	cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun	6e-13
cd05045	290	cd05045, PTKc_RET, Catalytic domain of the Protein	7e-13
cd06618	296	cd06618, PKc_MKK7, Catalytic domain of the dual-sp	8e-13
cd07844	291	cd07844, STKc_PCTAIRE_like, Catalytic domain of PC	8e-13
cd07855	334	cd07855, STKc_ERK5, Catalytic domain of the Serine	8e-13
cd05618	329	cd05618, STKc_aPKC_iota, Catalytic domain of the P	8e-13
cd05601	330	cd05601, STKc_CRIK, Catalytic domain of the Protei	9e-13
cd05042	269	cd05042, PTKc_Aatyk, Catalytic domain of the Prote	1e-12
cd05084	252	cd05084, PTKc_Fes, Catalytic domain of the Protein	1e-12
cd05035	273	cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li	1e-12
cd05604	325	cd05604, STKc_SGK3, Catalytic domain of the Protei	1e-12
cd05614	332	cd05614, STKc_MSK2_N, N-terminal catalytic domain	2e-12
cd05101	304	cd05101, PTKc_FGFR2, Catalytic domain of the Prote	2e-12
cd07871	288	cd07871, STKc_PCTAIRE3, Catalytic domain of the Se	2e-12
cd05075	272	cd05075, PTKc_Axl, Catalytic domain of the Protein	2e-12
PRK13184	932	PRK13184, pknD, serine/threonine-protein kinase; R	3e-12
cd06636	282	cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr	3e-12
cd05109	279	cd05109, PTKc_HER2, Catalytic domain of the Protei	3e-12
cd05613	290	cd05613, STKc_MSK1_N, N-terminal catalytic domain	3e-12
cd05591	321	cd05591, STKc_nPKC_epsilon, Catalytic domain of th	3e-12
cd05605	285	cd05605, STKc_GRK4_like, Catalytic domain of G pro	3e-12
PTZ00036	440	PTZ00036, PTZ00036, glycogen synthase kinase; Prov	4e-12
cd05099	314	cd05099, PTKc_FGFR4, Catalytic domain of the Prote	4e-12
cd06637	272	cd06637, STKc_TNIK, Catalytic domain of the Protei	4e-12
cd07876	359	cd07876, STKc_JNK2, Catalytic domain of the Serine	4e-12
cd05617	327	cd05617, STKc_aPKC_zeta, Catalytic domain of the P	5e-12
cd05594	325	cd05594, STKc_PKB_alpha, Catalytic domain of the P	5e-12
cd05588	329	cd05588, STKc_aPKC, Catalytic domain of the Protei	6e-12
PTZ00267	478	PTZ00267, PTZ00267, NIMA-related protein kinase; P	6e-12
cd05632	285	cd05632, STKc_GRK5, Catalytic domain of the Protei	8e-12
cd05602	325	cd05602, STKc_SGK1, Catalytic domain of the Protei	9e-12
cd05595	323	cd05595, STKc_PKB_beta, Catalytic domain of the Pr	9e-12
cd05607	277	cd05607, STKc_GRK7, Catalytic domain of the Protei	1e-11
cd05584	323	cd05584, STKc_p70S6K, Catalytic domain of the Prot	1e-11
cd05631	285	cd05631, STKc_GRK4, Catalytic domain of the Protei	1e-11
cd06646	267	cd06646, STKc_MAP4K5, Catalytic domain of the Prot	2e-11
cd07865	310	cd07865, STKc_CDK9, Catalytic domain of the Serine	2e-11
cd07869	303	cd07869, STKc_PFTAIRE1, Catalytic domain of the Se	2e-11
cd05098	307	cd05098, PTKc_FGFR1, Catalytic domain of the Prote	2e-11
cd05079	284	cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma	2e-11
cd05062	277	cd05062, PTKc_IGF-1R, Catalytic domain of the Prot	2e-11
cd05593	328	cd05593, STKc_PKB_gamma, Catalytic domain of the P	2e-11
cd05100	334	cd05100, PTKc_FGFR3, Catalytic domain of the Prote	3e-11
cd06639	291	cd06639, STKc_myosinIIIB, Catalytic domain of the	3e-11
cd05078	258	cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat	3e-11
cd05571	323	cd05571, STKc_PKB, Catalytic domain of the Protein	4e-11
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	4e-11
cd05598	376	cd05598, STKc_LATS, Catalytic domain of the Protei	4e-11
cd08222	260	cd08222, STKc_Nek11, Catalytic domain of the Prote	4e-11
cd05621	370	cd05621, STKc_ROCK2, Catalytic domain of the Prote	4e-11
cd07853	372	cd07853, STKc_NLK, Catalytic domain of the Serine/	5e-11
cd05624	331	cd05624, STKc_MRCK_beta, Catalytic domain of the P	5e-11
cd05043	280	cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Rece	6e-11
cd07851	343	cd07851, STKc_p38, Catalytic domain of the Serine/	6e-11
PTZ00426	340	PTZ00426, PTZ00426, cAMP-dependent protein kinase	6e-11
cd07877	345	cd07877, STKc_p38alpha_MAPK14, Catalytic domain of	6e-11
cd05590	320	cd05590, STKc_nPKC_eta, Catalytic domain of the Pr	7e-11
cd05587	324	cd05587, STKc_cPKC, Catalytic domain of the Protei	7e-11
cd05061	288	cd05061, PTKc_InsR, Catalytic domain of the Protei	8e-11
cd07854	342	cd07854, STKc_MAPK4_6, Catalytic domain of the Ser	8e-11
PHA03210	501	PHA03210, PHA03210, serine/threonine kinase US3; P	1e-10
cd05615	323	cd05615, STKc_cPKC_alpha, Catalytic domain of the	1e-10
PTZ00263	329	PTZ00263, PTZ00263, protein kinase A catalytic sub	1e-10
cd05596	370	cd05596, STKc_ROCK, Catalytic domain of the Protei	1e-10
cd05037	259	cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) dom	2e-10
cd05619	316	cd05619, STKc_nPKC_theta, Catalytic domain of the	2e-10
cd05087	269	cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of t	2e-10
PTZ00283	496	PTZ00283, PTZ00283, serine/threonine protein kinas	2e-10
cd05096	304	cd05096, PTKc_DDR1, Catalytic domain of the Protei	3e-10
PHA03390	267	PHA03390, pk1, serine/threonine-protein kinase 1;	3e-10
cd05633	279	cd05633, STKc_GRK3, Catalytic domain of the Protei	3e-10
cd07859	338	cd07859, STKc_TDY_MAPK_plant, Catalytic domain of	4e-10
cd05616	323	cd05616, STKc_cPKC_beta, Catalytic domain of the P	4e-10
cd05620	316	cd05620, STKc_nPKC_delta, Catalytic domain of the	6e-10
cd07831	282	cd07831, STKc_MOK, Catalytic domain of the Serine/	6e-10
cd07875	364	cd07875, STKc_JNK1, Catalytic domain of the Serine	7e-10
cd05597	331	cd05597, STKc_DMPK_like, Catalytic domain of Myoto	7e-10
cd05585	312	cd05585, STKc_YPK1_like, Catalytic domain of Yeast	9e-10
cd07880	343	cd07880, STKc_p38gamma_MAPK12, Catalytic domain of	1e-09
cd05606	278	cd05606, STKc_beta_ARK, Catalytic domain of the Pr	1e-09
cd06638	286	cd06638, STKc_myosinIIIA, Catalytic domain of the	1e-09
cd05095	296	cd05095, PTKc_DDR2, Catalytic domain of the Protei	2e-09
cd07874	355	cd07874, STKc_JNK3, Catalytic domain of the Serine	3e-09
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	3e-09
cd05589	324	cd05589, STKc_PKN, Catalytic domain of the Protein	4e-09
cd05051	296	cd05051, PTKc_DDR, Catalytic domain of the Protein	6e-09
cd07857	332	cd07857, STKc_MPK1, Catalytic domain of the Serine	7e-09
cd05623	332	cd05623, STKc_MRCK_alpha, Catalytic domain of the	7e-09
cd05574	316	cd05574, STKc_phototropin_like, Catalytic domain o	8e-09
cd07879	342	cd07879, STKc_p38delta_MAPK13, Catalytic domain of	8e-09
PHA03209	357	PHA03209, PHA03209, serine/threonine kinase US3; P	1e-08
cd05626	381	cd05626, STKc_LATS2, Catalytic domain of the Prote	2e-08
cd07850	353	cd07850, STKc_JNK, Catalytic domain of the Serine/	3e-08
PTZ00266	1021	PTZ00266, PTZ00266, NIMA-related protein kinase; P	4e-08
cd05622	371	cd05622, STKc_ROCK1, Catalytic domain of the Prote	9e-08
cd05074	273	cd05074, PTKc_Tyro3, Catalytic domain of the Prote	1e-07
cd05599	364	cd05599, STKc_NDR_like, Catalytic domain of Nuclea	1e-07
cd05609	305	cd05609, STKc_MAST, Catalytic domain of the Protei	2e-07
cd05627	360	cd05627, STKc_NDR2, Catalytic domain of the Protei	2e-07
cd05625	382	cd05625, STKc_LATS1, Catalytic domain of the Prote	2e-07
PHA03211	461	PHA03211, PHA03211, serine/threonine kinase US3; P	4e-07
cd07878	343	cd07878, STKc_p38beta_MAPK11, Catalytic domain of	5e-07
PHA03212	391	PHA03212, PHA03212, serine/threonine kinase US3; P	9e-07
cd05628	363	cd05628, STKc_NDR1, Catalytic domain of the Protei	1e-06
cd07837	295	cd07837, STKc_CdkB_plant, Catalytic domain of the	1e-06
cd05076	274	cd05076, PTK_Tyk2_rpt1, Pseudokinase (repeat 1) do	2e-06
cd05106	374	cd05106, PTKc_CSF-1R, Catalytic domain of the Prot	4e-06
cd05086	268	cd05086, PTKc_Aatyk2, Catalytic domain of the Prot	5e-06
cd05610	669	cd05610, STKc_MASTL, Catalytic domain of the Prote	1e-05
cd05077	262	cd05077, PTK_Jak1_rpt1, Pseudokinase (repeat 1) do	1e-05
cd07868	317	cd07868, STKc_CDK8, Catalytic domain of the Serine	1e-05
cd05054	337	cd05054, PTKc_VEGFR, Catalytic domain of the Prote	1e-05
cd07867	317	cd07867, STKc_CDC2L6, Catalytic domain of Serine/T	1e-05
cd05103	343	cd05103, PTKc_VEGFR2, Catalytic domain of the Prot	3e-05
cd05102	338	cd05102, PTKc_VEGFR3, Catalytic domain of the Prot	3e-05
cd08216	314	cd08216, PK_STRAD, Pseudokinase domain of STE20-re	4e-05
cd05105	400	cd05105, PTKc_PDGFR_alpha, Catalytic domain of the	5e-05
cd05107	401	cd05107, PTKc_PDGFR_beta, Catalytic domain of the	1e-04
cd05104	375	cd05104, PTKc_Kit, Catalytic domain of the Protein	6e-04
cd05576	237	cd05576, STKc_RPK118_like, Catalytic domain of the	0.001
PHA02882	294	PHA02882, PHA02882, putative serine/threonine kina	0.002
cd05629	377	cd05629, STKc_NDR_like_fungal, Catalytic domain of	0.002
cd08226	328	cd08226, PK_STRAD_beta, Pseudokinase domain of STE	0.004

>gnl|CDD|173887 cd06899, lectin_legume_LecRK_Arcelin_ConA, legume lectins, lectin-like receptor kinases, arcelin, concanavalinA, and alpha-amylase inhibitor

 Score =  269 bits (691), Expect = 2e-86
 Identities = 104/245 (42%), Positives = 145/245 (59%), Gaps = 13/245 (5%)

Query: 9   TSFLYNGF--LHANLSLEGAAYISTSGILTVTNKSEG--LIGHALYPNPLRFKTSNKSVA 64
            SF +NGF    +NL+L+G A IS++G L +TN +     +G ALY  P+R   S     
Sbjct: 1   LSFNFNGFSSDQSNLTLQGDATISSNGALQLTNDTSPASSVGRALYSKPVRLWDSTTGKV 60

Query: 65  IDFRTNFVFSILPKYPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTKFSTRML 124
             F T+F FSI P  P LGG GLAF +  T+      +  +LGL N +  ++   S  ++
Sbjct: 61  ASFSTSFSFSITPPNPSLGGDGLAFFLAPTDSLPPASSGGYLGLFNSS--NNGNSSNHIV 118

Query: 125 AVEFDIIQNTELIDINDNHVGIDISSLISSASEPASYYSGNNHRIPILLRSGDPIQAWVD 184
           AVEFD  QN E  D +DNHVGID++SL+S     A Y+  +  +    L+SG P+QAW+D
Sbjct: 119 AVEFDTFQNPEFGDPDDNHVGIDVNSLVSV---KAGYWDDDGGK----LKSGKPMQAWID 171

Query: 185 YSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLITASHNVHGWS 244
           Y S    ++V++   GV KP +PL+S P+DLS V+ E +Y GFSASTGL+T  H +  WS
Sbjct: 172 YDSSSKRLSVTLAYSGVAKPKKPLLSYPVDLSKVLPEEVYVGFSASTGLLTELHYILSWS 231

Query: 245 ISIGG 249
            S  G
Sbjct: 232 FSSNG 236

This alignment model includes the legume lectins (also known as agglutinins), the arcelin (also known as phytohemagglutinin-L) family of lectin-like defense proteins, the LecRK family of lectin-like receptor kinases, concanavalinA (ConA), and an alpha-amylase inhibitor. Arcelin is a major seed glycoprotein discovered in kidney beans (Phaseolus vulgaris) that has insecticidal properties and protects the seeds from predation by larvae of various bruchids. Arcelin is devoid of monosaccharide binding properties and lacks a key metal-binding loop that is present in other members of this family. Phytohaemagglutinin (PHA) is a lectin found in plants, especially beans, that affects cell metabolism by inducing mitosis and by altering the permeability of the cell membrane to various proteins. PHA agglutinates most mammalian red blood cell types by binding glycans on the cell surface. Medically, PHA is used as a mitogen to trigger cell division in T-lymphocytes and to activate latent HIV-1 from human peripheral lymphocytes. Plant L-type lectins are primarily found in the seeds of leguminous plants where they constitute about 10% of the total soluble protein of the seed extracts. They are synthesized during seed development several weeks after flowering and transported to the vacuole where they become condensed into specialized vesicles called protein bodies. L-type lectins have a dome-shaped beta-barrel carbohydrate recognition domain with a curved seven-stranded beta-sheet referred to as the "front face" and a flat six-stranded beta-sheet referred to as the "back face". This domain homodimerizes so that adjacent back sheets form a contiguous 12-stranded sheet and homotetramers occur by a back-to-back association of these homodimers. Though L-type lectins exhibit both sequence and structural similarity to one another, their carbohydrate binding specificities differ widely. Length = 236

>gnl|CDD|215744 pfam00139, Lectin_legB, Legume lectin domain

 Score =  255 bits (653), Expect = 6e-81
 Identities = 102/242 (42%), Positives = 141/242 (58%), Gaps = 13/242 (5%)

Query: 7   DTTSFLYNGFLH-ANLSLEGAAYISTSGILTVTNKSEGLIGHALYPNPLRFKTSNKSVAI 65
            T SF YNGF + +NL+L+G A +  +G+L +TN +    G ALY  P+R   S+     
Sbjct: 1   STVSFNYNGFSNVSNLTLQGDATVLPNGLLQLTNVTNNSAGRALYSKPIRLWDSSTGKVA 60

Query: 66  DFRTNFVFSILPK-YPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTKFSTRML 124
            F T+FVF+I        GG GLAF +  +       +  +LGL N   S++   S  ++
Sbjct: 61  SFSTSFVFAIKNIPKSTNGGDGLAFFLAPSGTQPGASSGGYLGLFN--SSNNGNSSNHIV 118

Query: 125 AVEFDIIQNTELIDINDNHVGIDISSLISSASEPASYYSGNNHRIPILLRSGDPIQAWVD 184
           AVEFD   N E  DI+DNHVGID++S+IS ASE AS+       +P+ L SG PIQ W+D
Sbjct: 119 AVEFDTFLNPEFNDIDDNHVGIDVNSIISVASESASF-------VPLDLNSGKPIQVWID 171

Query: 185 YSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLITASHNVHGWS 244
           Y      ++V++      KP RPL+S  +DLS+V+ E++Y GFSASTG  T SH V  WS
Sbjct: 172 YDGSSKRLSVTLAY--PNKPKRPLLSASVDLSTVLPEWVYVGFSASTGGATESHYVLSWS 229

Query: 245 IS 246
            S
Sbjct: 230 FS 231

Length = 231

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score =  175 bits (446), Expect = 6e-51
 Identities = 72/194 (37%), Positives = 104/194 (53%), Gaps = 11/194 (5%)

Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKE-FVAEIMSMGRLRHRNLVQLHGWC 396
           +G GGFG VY       G +VAIK I       + E  + EI  + +L H N+V+L+G  
Sbjct: 1   LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVF 60

Query: 397 RKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRV 456
             ++ L LV +Y   GSL  LL + + K    L+ D+  +IL+ I + L YLH      +
Sbjct: 61  EDENHLYLVMEYCEGGSLKDLLKENEGK----LSEDEILRILLQILEGLEYLHS---NGI 113

Query: 457 VHRDVKPSNILLD-TYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPE-LTRTGKAT 514
           +HRD+KP NILLD      KL DFGL+K+           IVGT  Y+APE L   G  +
Sbjct: 114 IHRDLKPENILLDSDNGKVKLADFGLSKLLTSD-KSLLKTIVGTPAYMAPEVLLGKGYYS 172

Query: 515 TSTDVYSYGILMLE 528
             +D++S G+++ E
Sbjct: 173 EKSDIWSLGVILYE 186

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score =  171 bits (435), Expect = 9e-49
 Identities = 69/200 (34%), Positives = 98/200 (49%), Gaps = 14/200 (7%)

Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFV---AEIMSMGRLRHRNLVQLHG 394
           +GSG FG VY+      G  VA+K +     +  K+      EI  + RL H N+V+L  
Sbjct: 7   LGSGSFGTVYKAKHKGTGKIVAVKIL-KKRSEKSKKDQTARREIRILRRLSHPNIVRLID 65

Query: 395 WCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQ 454
               +D L LV +Y   G L   L          L+ D+  KI + I + L YLH     
Sbjct: 66  AFEDKDHLYLVMEYCEGGDLFDYLSRG-----GPLSEDEAKKIALQILRGLEYLHS---N 117

Query: 455 RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGK-A 513
            ++HRD+KP NILLD     K+ DFGLAK     ++   T  VGT  Y+APE+   G   
Sbjct: 118 GIIHRDLKPENILLDENGVVKIADFGLAKKL-LKSSSSLTTFVGTPWYMAPEVLLGGNGY 176

Query: 514 TTSTDVYSYGILMLEVACGR 533
               DV+S G+++ E+  G+
Sbjct: 177 GPKVDVWSLGVILYELLTGK 196

Length = 260

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score =  165 bits (419), Expect = 1e-46
 Identities = 70/199 (35%), Positives = 104/199 (52%), Gaps = 11/199 (5%)

Query: 336 NLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKE-FVAEIMSMGRLRHRNLVQLHG 394
             +G G FG+VY       G  VAIK I     +  +E  + EI  + +L+H N+V+L+ 
Sbjct: 5   EKLGEGSFGKVYLARDKKTGKLVAIKVIKKKKIKKDRERILREIKILKKLKHPNIVRLYD 64

Query: 395 WCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQ 454
               +D+L LV +Y   G L  LL     K R  L+ D+    L  I  +L YLH    +
Sbjct: 65  VFEDEDKLYLVMEYCEGGDLFDLL-----KKRGRLSEDEARFYLRQILSALEYLHS---K 116

Query: 455 RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKAT 514
            +VHRD+KP NILLD   + KL DFGLA+  +     + T  VGT  Y+APE+       
Sbjct: 117 GIVHRDLKPENILLDEDGHVKLADFGLARQLDP--GEKLTTFVGTPEYMAPEVLLGKGYG 174

Query: 515 TSTDVYSYGILMLEVACGR 533
            + D++S G+++ E+  G+
Sbjct: 175 KAVDIWSLGVILYELLTGK 193

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score =  158 bits (403), Expect = 2e-44
 Identities = 78/276 (28%), Positives = 127/276 (46%), Gaps = 36/276 (13%)

Query: 339 GSGGFGRVYRGLM----PSLGLEVAIKRI-GHNSQQGMKEFVAEIMSMGRLRHRNLVQLH 393
           G G FG VY+G +        +EVA+K +    S+Q ++EF+ E   M +L H N+V+L 
Sbjct: 8   GEGAFGEVYKGKLKGKGGKKKVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNVVKLL 67

Query: 394 GWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECN 453
           G C +++ L +V +Y+  G L   L     K R  L+        + IA+ + YL     
Sbjct: 68  GVCTEEEPLYIVMEYMEGGDLLSYL----RKNRPKLSLSDLLSFALQIARGMEYLES--- 120

Query: 454 QRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IYEHGANPQTTHIVGTLG---YLAPELTR 509
           +  +HRD+   N L+   L  K+ DFGL++ +Y+           G      ++APE  +
Sbjct: 121 KNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDD----DYYRKRGGKLPIRWMAPESLK 176

Query: 510 TGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQ-TL 568
            GK T+ +DV+S+G+L+ E+        P  +  E+L  +++K     G           
Sbjct: 177 EGKFTSKSDVWSFGVLLWEIFTLGEQPYPGMSNEEVL--EYLK----NGYRLPQPPNCPP 230

Query: 569 DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL 604
           + YDL            C A +P  RP    +VE L
Sbjct: 231 ELYDLMLQ---------CWAEDPEDRPTFSELVEIL 257

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score =  158 bits (401), Expect = 5e-44
 Identities = 61/197 (30%), Positives = 108/197 (54%), Gaps = 13/197 (6%)

Query: 339 GSGGFGRVYRGLM----PSLGLEVAIKRI-GHNSQQGMKEFVAEIMSMGRLRHRNLVQLH 393
           G G FG VY+G +        +EVA+K +    S+Q ++EF+ E   M +L H N+V+L 
Sbjct: 8   GEGAFGEVYKGTLKGKGDGKEVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNIVKLL 67

Query: 394 GWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECN 453
           G C +++ L++V +Y+P G L   L  + ++  K L+        + IA+ + YL     
Sbjct: 68  GVCTEEEPLMIVMEYMPGGDLLDYL--RKNR-PKELSLSDLLSFALQIARGMEYLES--- 121

Query: 454 QRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IYEHGANPQTTHIVGTLGYLAPELTRTGK 512
           +  +HRD+   N L+   L  K+ DFGL++ +Y+          +  + ++APE  + GK
Sbjct: 122 KNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYKVKGGKL-PIRWMAPESLKEGK 180

Query: 513 ATTSTDVYSYGILMLEV 529
            T+ +DV+S+G+L+ E+
Sbjct: 181 FTSKSDVWSFGVLLWEI 197

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score =  154 bits (391), Expect = 1e-42
 Identities = 61/207 (29%), Positives = 101/207 (48%), Gaps = 20/207 (9%)

Query: 336 NLVGSGGFGRVYRGLM---PSLGLEVAIKRIGHN-SQQGMKEFVAEIMSMGRLRHRNLVQ 391
             +G G FG VY+G +        EVA+K +  + S++  K+F+ E   M +L H N+V+
Sbjct: 1   KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVR 60

Query: 392 LHGWCRKQDELLLVYDYVPNGSLDKLL----FDKDHKLRKLLTWDQRYKILIGIAQSLLY 447
           L G C +++ L LV +Y+  G L   L           +  L+        I IA+ + Y
Sbjct: 61  LLGVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEY 120

Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLG-----Y 502
           L     ++ VHRD+   N L+   L  K+ DFGL++        +      T G     +
Sbjct: 121 LAS---KKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDYYRKK----TGGKLPIRW 173

Query: 503 LAPELTRTGKATTSTDVYSYGILMLEV 529
           +APE  + G  T+ +DV+S+G+L+ E+
Sbjct: 174 MAPESLKDGIFTSKSDVWSFGVLLWEI 200

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score =  152 bits (386), Expect = 7e-42
 Identities = 82/272 (30%), Positives = 127/272 (46%), Gaps = 27/272 (9%)

Query: 339 GSGGFGRVYRG----LMPSLGLEVAIKRI-GHNSQQGMKEFVAEIMSMGRLRHRNLVQLH 393
           G G FG VY+G           +VA+K +    S++  +EF+ E   M +L H N+V+L 
Sbjct: 8   GEGAFGEVYKGTLKGDGEGTETKVAVKTLKEGASEEEREEFLEEASIMKKLSHPNIVRLL 67

Query: 394 GWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECN 453
           G C + + L +V +Y+P G L   L     K  + LT     ++ + IA+ + YL     
Sbjct: 68  GVCTQGEPLYIVTEYMPGGDLLDFL----RKHGEKLTLKDLLQMALQIAKGMEYLES--- 120

Query: 454 QRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IYEHGANPQTTHIVGTLGYLAPELTRTGK 512
           +  VHRD+   N L+   L  K+ DFGL++ IYE     +       + ++APE  + GK
Sbjct: 121 KNFVHRDLAARNCLVTENLVVKISDFGLSRDIYEDDYYRKRGGGKLPIKWMAPESLKDGK 180

Query: 513 ATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYYD 572
            T+ +DV+S+G+L+ E+        P  +  E      V EL  +G         L   +
Sbjct: 181 FTSKSDVWSFGVLLWEIFTLGEQPYPGMSNEE------VLELLEDGYR-------LPRPE 227

Query: 573 LAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL 604
               EL   L L C A +P  RP    +VE L
Sbjct: 228 NCPDELY-ELMLQCWAYDPEDRPTFSELVEDL 258

Length = 258

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score =  148 bits (377), Expect = 1e-40
 Identities = 68/206 (33%), Positives = 112/206 (54%), Gaps = 17/206 (8%)

Query: 336 NLVGSGGFGRVYRGLMPSLGLEVAIK--RIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLH 393
            L+G G FG VY  L    G  +A+K   +  +S++ ++    EI  +  L+H N+V+ +
Sbjct: 6   ELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYY 65

Query: 394 GWCRKQDE--LLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRY--KILIGIAQSLLYLH 449
           G  R +++  L +  +YV  GSL  LL  K  KL + +   ++Y  +IL G+A    YLH
Sbjct: 66  GSERDEEKNTLNIFLEYVSGGSLSSLL-KKFGKLPEPVI--RKYTRQILEGLA----YLH 118

Query: 450 EECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IYEHGANPQTTHIVGTLGYLAPELT 508
                 +VHRD+K +NIL+D+    KL DFG AK + +      T  + GT  ++APE+ 
Sbjct: 119 S---NGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVI 175

Query: 509 RTGKATTSTDVYSYGILMLEVACGRR 534
           R  +   + D++S G  ++E+A G+ 
Sbjct: 176 RGEEYGRAADIWSLGCTVIEMATGKP 201

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score =  140 bits (354), Expect = 1e-37
 Identities = 68/207 (32%), Positives = 106/207 (51%), Gaps = 12/207 (5%)

Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +G GGFG VY+      G EVAIK I   S++  ++ + EI  + + +H N+V+ +G   
Sbjct: 8   IGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYL 67

Query: 398 KQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVV 457
           K+DEL +V ++   GSL  LL   +      LT  Q   +   + + L YLH   +  ++
Sbjct: 68  KKDELWIVMEFCSGGSLKDLLKSTNQT----LTESQIAYVCKELLKGLEYLH---SNGII 120

Query: 458 HRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTST 517
           HRD+K +NILL +    KL DFGL+             +VGT  ++APE+          
Sbjct: 121 HRDIKAANILLTSDGEVKLIDFGLSAQLSDT--KARNTMVGTPYWMAPEVINGKPYDYKA 178

Query: 518 DVYSYGILMLEVACGR---RSIEPQKA 541
           D++S GI  +E+A G+     + P KA
Sbjct: 179 DIWSLGITAIELAEGKPPYSELPPMKA 205

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score =  129 bits (327), Expect = 8e-34
 Identities = 67/196 (34%), Positives = 105/196 (53%), Gaps = 11/196 (5%)

Query: 335 QNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLRHRNLVQL 392
            +L+G G FG VY+GL    G  VAIK+I      ++ +K  + EI  +  L+H N+V+ 
Sbjct: 5   GDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKY 64

Query: 393 HGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEEC 452
            G     D L ++ +Y  NGSL +++  K     + L     Y++L G    L YLHE  
Sbjct: 65  IGSIETSDSLYIILEYAENGSLRQII-KKFGPFPESLVAVYVYQVLQG----LAYLHE-- 117

Query: 453 NQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGK 512
            Q V+HRD+K +NIL       KL DFG+A    +  +     +VGT  ++APE+     
Sbjct: 118 -QGVIHRDIKAANILTTKDGVVKLADFGVA-TKLNDVSKDDASVVGTPYWMAPEVIEMSG 175

Query: 513 ATTSTDVYSYGILMLE 528
           A+T++D++S G  ++E
Sbjct: 176 ASTASDIWSLGCTVIE 191

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score =  119 bits (301), Expect = 3e-30
 Identities = 56/202 (27%), Positives = 103/202 (50%), Gaps = 7/202 (3%)

Query: 335 QNLVGSGGFGRVYRGLMPSLGLEVAIKRI--GHNSQQGMKEFVAEIMSMGRLRHRNLVQL 392
              +G G FG+VY     S G    +K I   + S++  ++ + E+  + +L H N+++ 
Sbjct: 5   IKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKY 64

Query: 393 HGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEEC 452
           +    ++ +L +V +Y   G L + +  K  K  K    +Q     + +  +L YLH   
Sbjct: 65  YESFEEKGKLCIVMEYADGGDLSQKI-KKQKKEGKPFPEEQILDWFVQLCLALKYLHS-- 121

Query: 453 NQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGK 512
            ++++HRD+KP NI L +    KLGDFG++K+     +   T +VGT  YL+PEL +   
Sbjct: 122 -RKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVDLAKT-VVGTPYYLSPELCQNKP 179

Query: 513 ATTSTDVYSYGILMLEVACGRR 534
               +D++S G ++ E+   + 
Sbjct: 180 YNYKSDIWSLGCVLYELCTLKH 201

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score =  119 bits (300), Expect = 3e-30
 Identities = 68/200 (34%), Positives = 101/200 (50%), Gaps = 18/200 (9%)

Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWC 396
            +G G FG V  G     G +VA+K +  +     + F+AE   M  LRH NLVQL G  
Sbjct: 13  TIGKGEFGDVMLGDY--RGQKVAVKCL-KDDSTAAQAFLAEASVMTTLRHPNLVQLLGVV 69

Query: 397 RKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRV 456
            + + L +V +Y+  GSL   L  +    R ++T  Q+    + + + + YL E   +  
Sbjct: 70  LQGNPLYIVTEYMAKGSLVDYLRSRG---RAVITLAQQLGFALDVCEGMEYLEE---KNF 123

Query: 457 VHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTL--GYLAPELTRTGKAT 514
           VHRD+   N+L+   L AK+ DFGLAK              G L   + APE  R  K +
Sbjct: 124 VHRDLAARNVLVSEDLVAKVSDFGLAK------EASQGQDSGKLPVKWTAPEALREKKFS 177

Query: 515 TSTDVYSYGILMLEV-ACGR 533
           T +DV+S+GIL+ E+ + GR
Sbjct: 178 TKSDVWSFGILLWEIYSFGR 197

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

 Score =  115 bits (288), Expect = 1e-28
 Identities = 69/205 (33%), Positives = 117/205 (57%), Gaps = 19/205 (9%)

Query: 334 EQNLVGSGGFGRVYRGLMPSLG---LEVAIKRI--GHNSQQGMKEFVAEIMSMGRLRHRN 388
           +Q ++G+G FG V+RG++   G   + VAIK +  G+  +Q  ++F++E   MG+  H N
Sbjct: 9   KQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQ-RQDFLSEASIMGQFSHHN 67

Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYL 448
           +++L G   K    +++ +Y+ NG+LDK L D D +        Q   +L GIA  + YL
Sbjct: 68  IIRLEGVVTKFKPAMIITEYMENGALDKYLRDHDGEFSSY----QLVGMLRGIAAGMKYL 123

Query: 449 HEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVG----TLGYLA 504
               +   VHRD+   NIL+++ L  K+ DFGL+++ E   +P+ T+        + + A
Sbjct: 124 ---SDMNYVHRDLAARNILVNSNLECKVSDFGLSRVLED--DPEGTYTTSGGKIPIRWTA 178

Query: 505 PELTRTGKATTSTDVYSYGILMLEV 529
           PE     K T+++DV+S+GI+M EV
Sbjct: 179 PEAIAYRKFTSASDVWSFGIVMWEV 203

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268

>gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

 Score =  114 bits (287), Expect = 2e-28
 Identities = 70/201 (34%), Positives = 109/201 (54%), Gaps = 14/201 (6%)

Query: 335 QNLVGSGGFGRVYRGLMPSLG---LEVAIKRIGHNSQQGMK-EFVAEIMSMGRLRHRNLV 390
           + ++G G FG V RG +   G   ++VAIK +   S    + +F+ E   MG+  H N++
Sbjct: 9   EKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNII 68

Query: 391 QLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHE 450
           +L G   K   ++++ +Y+ NGSLDK L + D K     T  Q   +L GIA  + YL E
Sbjct: 69  RLEGVVTKSRPVMIITEYMENGSLDKFLRENDGK----FTVGQLVGMLRGIASGMKYLSE 124

Query: 451 ECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVG--TLGYLAPELT 508
                 VHRD+   NIL+++ L  K+ DFGL++  E  +    T   G   + + APE  
Sbjct: 125 MN---YVHRDLAARNILVNSNLVCKVSDFGLSRRLED-SEATYTTKGGKIPIRWTAPEAI 180

Query: 509 RTGKATTSTDVYSYGILMLEV 529
              K T+++DV+S+GI+M EV
Sbjct: 181 AYRKFTSASDVWSFGIVMWEV 201

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score =  114 bits (287), Expect = 2e-28
 Identities = 65/202 (32%), Positives = 105/202 (51%), Gaps = 8/202 (3%)

Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRI--GHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGW 395
           +G G FG V +    S G  +  K I  G+ +++  ++ V+E+  +  L+H N+V+ +  
Sbjct: 8   IGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDR 67

Query: 396 C--RKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLH--EE 451
              R    L +V +Y   G L +L+  K  K RK +  +  ++IL  +  +L   H   +
Sbjct: 68  IIDRSNQTLYIVMEYCEGGDLAQLI-QKCKKERKYIEEEFIWRILTQLLLALYECHNRSD 126

Query: 452 CNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTG 511
               V+HRD+KP+NI LD   N KLGDFGLAKI  H ++   T+ VGT  Y++PE     
Sbjct: 127 PGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGHDSSFAKTY-VGTPYYMSPEQLNHM 185

Query: 512 KATTSTDVYSYGILMLEVACGR 533
                +D++S G L+ E+    
Sbjct: 186 SYDEKSDIWSLGCLIYELCALS 207

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score =  117 bits (292), Expect = 2e-28
 Identities = 83/322 (25%), Positives = 131/322 (40%), Gaps = 27/322 (8%)

Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGH---NSQQGMKEFVAEIMSMGRLRH-RNLVQL 392
            +G G FG VY          VA+K +     +  + ++ F+ EI  +  L H  N+V+L
Sbjct: 7   KLGEGSFGEVYLAR---DRKLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKL 63

Query: 393 HGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEEC 452
           + + + +  L LV +YV  GSL+ LL  K    +  L+  +   IL  I  +L YLH   
Sbjct: 64  YDFFQDEGSLYLVMEYVDGGSLEDLL--KKIGRKGPLSESEALFILAQILSALEYLHS-- 119

Query: 453 NQRVVHRDVKPSNILLDTYLN-AKLGDFGLAKIYEHGANPQ-----TTHIVGTLGYLAPE 506
            + ++HRD+KP NILLD      KL DFGLAK+     +        +  VGT GY+APE
Sbjct: 120 -KGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPE 178

Query: 507 L---TRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQA 563
           +        A++S+D++S GI + E+  G     P +            ++ LE      
Sbjct: 179 VLLGLSLAYASSSSDIWSLGITLYELLTGLP---PFEGEKNSSATSQTLKIILELPTPSL 235

Query: 564 IDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLGDSSLPPLPPDIHLKDTR 623
                       ++   +L     A +P  R      +   L          +  L D  
Sbjct: 236 ASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLA---HLKLKESDLSDLL 292

Query: 624 NIMGFSDFPNDSDFFNSKLMSS 645
                +            L+SS
Sbjct: 293 KPDDSAPLRLSLPPSLEALISS 314

Length = 384

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score =  112 bits (282), Expect = 9e-28
 Identities = 72/206 (34%), Positives = 109/206 (52%), Gaps = 22/206 (10%)

Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRI-----GHNSQQGMKEFVAEIMSMGRLRHRNLVQ 391
           L+GSG FG VY GL    G   A+K +     G   Q+ +K+   EI  + +L+H N+VQ
Sbjct: 7   LLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQ 66

Query: 392 LHGWCRKQDELLLVYDYVPNGSLDKLL--FDK-DHKLRKLLTWDQRYKILIGIAQSLLYL 448
             G  R++D L +  + VP GSL KLL  +      + +L T     +IL+G+     YL
Sbjct: 67  YLGTEREEDNLYIFLELVPGGSLAKLLKKYGSFPEPVIRLYT----RQILLGLE----YL 118

Query: 449 HEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPE-L 507
           H   ++  VHRD+K +NIL+DT    KL DFG+AK              G+  ++APE +
Sbjct: 119 H---DRNTVHRDIKGANILVDTNGVVKLADFGMAKQVV--EFSFAKSFKGSPYWMAPEVI 173

Query: 508 TRTGKATTSTDVYSYGILMLEVACGR 533
            + G    + D++S G  +LE+A G+
Sbjct: 174 AQQGGYGLAADIWSLGCTVLEMATGK 199

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score =  112 bits (282), Expect = 2e-27
 Identities = 68/218 (31%), Positives = 107/218 (49%), Gaps = 27/218 (12%)

Query: 336 NLVGSGGFGRVYRG----LMPSLGLEVAIKRIGHNS-QQGMKEFVAEIMSMGRLRHRNLV 390
             +G G FG+V       L  + G +VA+K + H+  +Q   +F  EI  +  L H N+V
Sbjct: 10  KQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIV 69

Query: 391 QLHGWCRKQ--DELLLVYDYVPNGSLDKLL-FDKDHKLRKLLTWDQRYKILIGIAQSLLY 447
           +  G C K     L L+ +Y+P+GSL   L   +D    K L           I + + Y
Sbjct: 70  KYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLL-----LFSSQICKGMDY 124

Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKI------YEHGANPQTTHIVGTLG 501
           L    +QR +HRD+   NIL+++    K+ DFGLAK+      Y +   P  + I     
Sbjct: 125 LG---SQRYIHRDLAARNILVESEDLVKISDFGLAKVLPEDKDYYYVKEPGESPIF---- 177

Query: 502 YLAPELTRTGKATTSTDVYSYGILMLEV-ACGRRSIEP 538
           + APE  RT K ++++DV+S+G+ + E+   G  S  P
Sbjct: 178 WYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSP 215

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

 Score =  109 bits (273), Expect = 1e-26
 Identities = 69/204 (33%), Positives = 111/204 (54%), Gaps = 17/204 (8%)

Query: 335 QNLVGSGGFGRVYRGLMPSLGLE---VAIK--RIGHNSQQGMKEFVAEIMSMGRLRHRNL 389
           + ++G+G FG V RG +   G     VAIK  + G+  +Q  ++F++E   MG+  H N+
Sbjct: 9   EEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQ-RRDFLSEASIMGQFDHPNI 67

Query: 390 VQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLH 449
           + L G   K   ++++ +++ NG+LD  L   D +     T  Q   +L GIA  + YL 
Sbjct: 68  IHLEGVVTKSRPVMIITEFMENGALDSFLRQNDGQ----FTVIQLVGMLRGIAAGMKYLS 123

Query: 450 EECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGA-NPQTTHIVG---TLGYLAP 505
           E      VHRD+   NIL+++ L  K+ DFGL++  E    +P  T  +G    + + AP
Sbjct: 124 E---MNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAP 180

Query: 506 ELTRTGKATTSTDVYSYGILMLEV 529
           E     K T+++DV+SYGI+M EV
Sbjct: 181 EAIAYRKFTSASDVWSYGIVMWEV 204

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score =  108 bits (272), Expect = 2e-26
 Identities = 61/203 (30%), Positives = 99/203 (48%), Gaps = 18/203 (8%)

Query: 332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQ 391
           F  +  +GSG FG V+ GL  +  + VAIK +  +     ++F  E+ ++ RLRH++L+ 
Sbjct: 8   FTLERKLGSGYFGEVWEGLWKNR-VRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLIS 66

Query: 392 LHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGI----AQSLLY 447
           L   C   + + ++ + +  GSL   L   + +             LI +    A+ + Y
Sbjct: 67  LFAVCSVGEPVYIITELMEKGSLLAFLRSPEGQ-------VLPVASLIDMACQVAEGMAY 119

Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IYEHGANPQTTHIVGTLGYLAPE 506
           L E   Q  +HRD+   NIL+   L  K+ DFGLA+ I E         I     + APE
Sbjct: 120 LEE---QNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYLSSDKKI--PYKWTAPE 174

Query: 507 LTRTGKATTSTDVYSYGILMLEV 529
               G  +T +DV+S+GIL+ E+
Sbjct: 175 AASHGTFSTKSDVWSFGILLYEM 197

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score =  109 bits (275), Expect = 2e-26
 Identities = 65/208 (31%), Positives = 104/208 (50%), Gaps = 27/208 (12%)

Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRI-GHNSQQGMKEFVA-EIMSMGRLRHRNLVQLHGW 395
           +G G +G+VY+      G  VA+K+I   N ++G       EI  + +LRH N+V+L   
Sbjct: 7   IGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEI 66

Query: 396 C--RKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQR----YKILIGIAQSLLYLH 449
              + +  + +V++Y+ +  L  LL   + K     T  Q      ++L G+     YLH
Sbjct: 67  VTSKGKGSIYMVFEYMDH-DLTGLLDSPEVKF----TESQIKCYMKQLLEGLQ----YLH 117

Query: 450 EECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL-- 507
              +  ++HRD+K SNIL++     KL DFGLA+ Y    +   T+ V TL Y  PEL  
Sbjct: 118 ---SNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSADYTNRVITLWYRPPELLL 174

Query: 508 --TRTGKATTSTDVYSYGILMLEVACGR 533
             TR G      D++S G ++ E+  G+
Sbjct: 175 GATRYG---PEVDMWSVGCILAELFLGK 199

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score =  108 bits (272), Expect = 2e-26
 Identities = 63/202 (31%), Positives = 93/202 (46%), Gaps = 18/202 (8%)

Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRI--GHNSQQGMKEFV-AEIMSMGRLRHRNLVQLHG 394
           +G G FG+V        G   A+K +      ++   E    E   + R+ H  +V+LH 
Sbjct: 1   LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLH- 59

Query: 395 WCRKQDE--LLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIG-IAQSLLYLHEE 451
               Q E  L LV +Y P G L   L     K  +    ++R +     I  +L YLH  
Sbjct: 60  -YAFQTEEKLYLVLEYAPGGELFSHL----SKEGRFS--EERARFYAAEIVLALEYLH-- 110

Query: 452 CNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTG 511
            +  +++RD+KP NILLD   + KL DFGLAK        +T    GT  YLAPE+    
Sbjct: 111 -SLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSE-GSRTNTFCGTPEYLAPEVLLGK 168

Query: 512 KATTSTDVYSYGILMLEVACGR 533
               + D +S G+L+ E+  G+
Sbjct: 169 GYGKAVDWWSLGVLLYEMLTGK 190

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score =  108 bits (272), Expect = 2e-26
 Identities = 57/198 (28%), Positives = 104/198 (52%), Gaps = 13/198 (6%)

Query: 339 GSGGFGRVYRGLMPSLGLEVAIKRIGHNSQ-QGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           G G  G VY+      G   A+K+I  +   +  K+ + E+ ++       +V+ +G   
Sbjct: 10  GQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFY 69

Query: 398 KQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRY--KILIGIAQSLLYLHEECNQR 455
           K+ E+ +V +Y+  GSL  LL       +K+    +     I   I + L YLH    + 
Sbjct: 70  KEGEISIVLEYMDGGSLADLL-------KKVGKIPEPVLAYIARQILKGLDYLHT--KRH 120

Query: 456 VVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATT 515
           ++HRD+KPSN+L+++    K+ DFG++K+ E+  +   T  VGT+ Y++PE  +    + 
Sbjct: 121 IIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQCNTF-VGTVTYMSPERIQGESYSY 179

Query: 516 STDVYSYGILMLEVACGR 533
           + D++S G+ +LE A G+
Sbjct: 180 AADIWSLGLTLLECALGK 197

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score =  107 bits (269), Expect = 4e-26
 Identities = 68/209 (32%), Positives = 110/209 (52%), Gaps = 20/209 (9%)

Query: 336 NLVGSGGFGRVYRGLMPSLGLEVAIK--RIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLH 393
           N +G G FG+VY  +    G  +A+K  RI  N  + +KE   E+  +  L+H NLV+ +
Sbjct: 6   NKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYY 65

Query: 394 GWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRY--KILIGIAQSLLYLHEE 451
           G    ++++ +  +Y   G+L++LL   +H         + Y  ++L G+A    YLH  
Sbjct: 66  GVEVHREKVYIFMEYCSGGTLEELL---EHGRILDEHVIRVYTLQLLEGLA----YLHS- 117

Query: 452 CNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANP---QTTHIVGTLGYLAPELT 508
               +VHRD+KP+NI LD     KLGDFG A   ++       +   + GT  Y+APE+ 
Sbjct: 118 --HGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVI 175

Query: 509 RTGKAT---TSTDVYSYGILMLEVACGRR 534
             GK      + D++S G ++LE+A G+R
Sbjct: 176 TGGKGKGHGRAADIWSLGCVVLEMATGKR 204

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score =  106 bits (266), Expect = 1e-25
 Identities = 57/198 (28%), Positives = 101/198 (51%), Gaps = 12/198 (6%)

Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWC 396
            +G G +G VY+ +    G  VAIK +    ++ ++E + EI  + +     +V+ +G  
Sbjct: 10  KLGEGSYGSVYKAIHKETGQVVAIKVV--PVEEDLQEIIKEISILKQCDSPYIVKYYGSY 67

Query: 397 RKQDELLLVYDYVPNGSLDKLLFDKDHKLR-KLLTWDQRYKILIGIAQSLLYLHEECNQR 455
            K  +L +V +Y   GS+  ++     K+  K LT ++   IL    + L YLH   + +
Sbjct: 68  FKNTDLWIVMEYCGAGSVSDIM-----KITNKTLTEEEIAAILYQTLKGLEYLH---SNK 119

Query: 456 VVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATT 515
            +HRD+K  NILL+    AKL DFG++         +   ++GT  ++APE+ +      
Sbjct: 120 KIHRDIKAGNILLNEEGQAKLADFGVSGQLTD-TMAKRNTVIGTPFWMAPEVIQEIGYNN 178

Query: 516 STDVYSYGILMLEVACGR 533
             D++S GI  +E+A G+
Sbjct: 179 KADIWSLGITAIEMAEGK 196

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional

 Score =  112 bits (281), Expect = 1e-25
 Identities = 91/337 (27%), Positives = 159/337 (47%), Gaps = 43/337 (12%)

Query: 275 FSVGITLAGMAFLILIIAGAIHVLQR------IKYADKMLEDWEIQCGARRF-KYAELAS 327
           F +  TL   AFL+L +     V  R      +K  +     WE+Q    +  K   +  
Sbjct: 630 FYITCTLG--AFLVLALVAFGFVFIRGRNNLELKRVENEDGTWELQFFDSKVSKSITIND 687

Query: 328 VTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIG-HNSQQGMKEFVAEIMSMGRLRH 386
           +     E+N++  G  G  Y+G     G++  +K I   NS         EI  MG+L+H
Sbjct: 688 ILSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSIPSS-----EIADMGKLQH 742

Query: 387 RNLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLL 446
            N+V+L G CR +    L+++Y+   +L ++L +        L+W++R KI IGIA++L 
Sbjct: 743 PNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLRN--------LSWERRRKIAIGIAKALR 794

Query: 447 YLHEECNQRVVHRDVKPSNILLDTYLNAKL--GDFGLAKIYEHGANPQTTHIVGTLGYLA 504
           +LH  C+  VV  ++ P  I++D      L     GL           T   + +  Y+A
Sbjct: 795 FLHCRCSPAVVVGNLSPEKIIIDGKDEPHLRLSLPGLLCT-------DTKCFISS-AYVA 846

Query: 505 PELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVK----ELHLEGEI 560
           PE   T   T  +D+Y +G++++E+  G+   + +       +V+W +    + HL+  I
Sbjct: 847 PETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHG-SIVEWARYCYSDCHLDMWI 905

Query: 561 TQAI--DQTLDYYDLAEAELVLNLGLFCSAPNPVYRP 595
             +I  D +++  ++ E   V+NL L C+A +P  RP
Sbjct: 906 DPSIRGDVSVNQNEIVE---VMNLALHCTATDPTARP 939

Length = 968

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score =  106 bits (265), Expect = 2e-25
 Identities = 85/270 (31%), Positives = 127/270 (47%), Gaps = 30/270 (11%)

Query: 333 GEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQL 392
           GE+ ++G G +G VY     S  + +AIK I     + ++    EI     L+HRN+VQ 
Sbjct: 11  GERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQY 70

Query: 393 HGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILI---GIAQSLLYLH 449
            G   +     +  + VP GSL  LL  K   L+     D    I+     I + L YLH
Sbjct: 71  LGSDSENGFFKIFMEQVPGGSLSALLRSKWGPLK-----DNEQTIIFYTKQILEGLKYLH 125

Query: 450 EECNQRVVHRDVKPSNILLDTYLNA-KLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELT 508
           +    ++VHRD+K  N+L++TY    K+ DFG +K    G NP T    GTL Y+APE+ 
Sbjct: 126 D---NQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLA-GINPCTETFTGTLQYMAPEVI 181

Query: 509 RTGKA--TTSTDVYSYGILMLEVACGRRS-IEPQKAAAELLLVDWVKELHLEGEITQAID 565
             G        D++S G  ++E+A G+   IE  +  A +  V   K   +  EI +++ 
Sbjct: 182 DKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFK---IHPEIPESLS 238

Query: 566 QTLDYYDLAEAELVLNLGLFCSAPNPVYRP 595
                   AEA+   N  L C  P+P  R 
Sbjct: 239 --------AEAK---NFILRCFEPDPDKRA 257

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score =  105 bits (264), Expect = 3e-25
 Identities = 61/230 (26%), Positives = 105/230 (45%), Gaps = 43/230 (18%)

Query: 332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEF-VAEIM----SMGRL-R 385
           FG+  ++G G F  V          E AIK +  + +Q +KE  V  +      + RL  
Sbjct: 5   FGK--IIGEGSFSTVVLAKEKETNKEYAIKIL--DKRQLIKEKKVKYVKIEKEVLTRLNG 60

Query: 386 HRNLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRY---KILIGIA 442
           H  +++L+   + ++ L  V +Y PNG L + +     K   L     R+   +IL+ + 
Sbjct: 61  HPGIIKLYYTFQDEENLYFVLEYAPNGELLQYI----RKYGSLDEKCTRFYAAEILLALE 116

Query: 443 QSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIY----------------- 485
               YLH   ++ ++HRD+KP NILLD  ++ K+ DFG AK+                  
Sbjct: 117 ----YLH---SKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGDATNID 169

Query: 486 --EHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGR 533
                   +    VGT  Y++PEL     A  S+D+++ G ++ ++  G+
Sbjct: 170 SQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGK 219

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score =  103 bits (260), Expect = 7e-25
 Identities = 65/199 (32%), Positives = 97/199 (48%), Gaps = 17/199 (8%)

Query: 338 VGSGGFGRVYRG--LMPSLG-LEVAIKRIGHN-SQQGMKEFVAEIMSMGRLRHRNLVQLH 393
           +G G FG V +G  LM S   +EVA+K +       G KEF+ E   M +L H  +V+L 
Sbjct: 3   LGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLI 62

Query: 394 GWCRKQDELLLVYDYVPNGSLDKLLFDKDH-KLRKLLTWDQRYKILIGIAQSLLYLHEEC 452
           G C K + L+LV +  P G L K L  +    +  L            +A  + YL    
Sbjct: 63  GVC-KGEPLMLVMELAPLGPLLKYLKKRREIPVSDLKEL------AHQVAMGMAYLES-- 113

Query: 453 NQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGAN--PQTTHIVGTLGYLAPELTRT 510
            +  VHRD+   N+LL     AK+ DFG+++    G++    TT     L + APE    
Sbjct: 114 -KHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATTAGRWPLKWYAPECINY 172

Query: 511 GKATTSTDVYSYGILMLEV 529
           GK ++ +DV+SYG+ + E 
Sbjct: 173 GKFSSKSDVWSYGVTLWEA 191

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

 Score =  103 bits (258), Expect = 1e-24
 Identities = 69/202 (34%), Positives = 109/202 (53%), Gaps = 15/202 (7%)

Query: 335 QNLVGSGGFGRVYRGLMPSLG---LEVAIK--RIGHNSQQGMKEFVAEIMSMGRLRHRNL 389
           + ++G+G FG V  G +   G   + VAIK  + G+  +Q  ++F++E   MG+  H N+
Sbjct: 9   EKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQ-RRDFLSEASIMGQFDHPNI 67

Query: 390 VQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLH 449
           + L G   K   +++V +Y+ NGSLD  L   D +     T  Q   +L GIA  + YL 
Sbjct: 68  IHLEGVVTKSKPVMIVTEYMENGSLDAFLRKHDGQ----FTVIQLVGMLRGIASGMKYL- 122

Query: 450 EECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLG--YLAPEL 507
              +   VHRD+   NIL+++ L  K+ DFGL+++ E       T   G +   + APE 
Sbjct: 123 --SDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEA 180

Query: 508 TRTGKATTSTDVYSYGILMLEV 529
               K T+++DV+SYGI+M EV
Sbjct: 181 IAYRKFTSASDVWSYGIVMWEV 202

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score =  102 bits (257), Expect = 3e-24
 Identities = 62/199 (31%), Positives = 98/199 (49%), Gaps = 12/199 (6%)

Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRI--GHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGW 395
           +G G +G VY+      G  VAIK+I     S+   K  + EI  +  L H N+++L   
Sbjct: 7   IGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDV 66

Query: 396 CRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQR 455
            R + +L LV++++ +  L KL+ D+    ++ L        L  + Q L + H      
Sbjct: 67  FRHKGDLYLVFEFM-DTDLYKLIKDR----QRGLPESLIKSYLYQLLQGLAFCHS---HG 118

Query: 456 VVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPE-LTRTGKAT 514
           ++HRD+KP N+L++T    KL DFGLA+ +        TH V T  Y APE L      +
Sbjct: 119 ILHRDLKPENLLINTEGVLKLADFGLARSF-GSPVRPYTHYVVTRWYRAPELLLGDKGYS 177

Query: 515 TSTDVYSYGILMLEVACGR 533
           T  D++S G +  E+   R
Sbjct: 178 TPVDIWSVGCIFAELLSRR 196

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score =  101 bits (254), Expect = 7e-24
 Identities = 61/205 (29%), Positives = 98/205 (47%), Gaps = 30/205 (14%)

Query: 339 GSGGFGRVYRGLMPSLG----LEVAIKRIGHNS-QQGMKEFVAEIMSMGRLRHRNLVQLH 393
           GSG FG VY+G+    G    + VAIK +   +  +  KE + E   M  + H ++V+L 
Sbjct: 16  GSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLL 75

Query: 394 GWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLR----KLLTWDQRYKILIGIAQSLLYLH 449
           G C    ++ L+   +P G L   +  ++HK       LL W  +      IA+ + YL 
Sbjct: 76  GICLSS-QVQLITQLMPLGCLLDYV--RNHKDNIGSQYLLNWCVQ------IAKGMSYLE 126

Query: 450 EECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLG-----YLA 504
           E   +R+VHRD+   N+L+ T  + K+ DFGLAK+ +              G     ++A
Sbjct: 127 E---KRLVHRDLAARNVLVKTPQHVKITDFGLAKLLD----VDEKEYHAEGGKVPIKWMA 179

Query: 505 PELTRTGKATTSTDVYSYGILMLEV 529
            E       T  +DV+SYG+ + E+
Sbjct: 180 LESILHRIYTHKSDVWSYGVTVWEL 204

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score =  101 bits (254), Expect = 9e-24
 Identities = 64/199 (32%), Positives = 101/199 (50%), Gaps = 12/199 (6%)

Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRI-GHNSQQGM-KEFVAEIMSMGRLRHRNLVQLHGW 395
           +G G +G VY+      G  VA+K+I   N ++G+    + EI  +  L+H N+V+L   
Sbjct: 7   LGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDV 66

Query: 396 CRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQR 455
              + +L LV++Y     L K L     K    L+ +    I+  + + L Y H     R
Sbjct: 67  IHTERKLYLVFEYCDM-DLKKYL----DKRPGPLSPNLIKSIMYQLLRGLAYCHS---HR 118

Query: 456 VVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPE-LTRTGKAT 514
           ++HRD+KP NIL++     KL DFGLA+ +        TH V TL Y APE L  +   +
Sbjct: 119 ILHRDLKPQNILINRDGVLKLADFGLARAFGI-PLRTYTHEVVTLWYRAPEILLGSKHYS 177

Query: 515 TSTDVYSYGILMLEVACGR 533
           T+ D++S G +  E+  G+
Sbjct: 178 TAVDIWSVGCIFAEMITGK 196

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score =  101 bits (253), Expect = 1e-23
 Identities = 61/195 (31%), Positives = 99/195 (50%), Gaps = 9/195 (4%)

Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +G G  G VY+    + G EVAIK++    +Q  +  + EI+ M   +H N+V  +    
Sbjct: 27  IGEGASGEVYKATDRATGKEVAIKKM-RLRKQNKELIINEILIMKDCKHPNIVDYYDSYL 85

Query: 398 KQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVV 457
             DEL +V +Y+  GSL  ++     ++       Q   +   + Q L YLH   +Q V+
Sbjct: 86  VGDELWVVMEYMDGGSLTDIITQNFVRM----NEPQIAYVCREVLQGLEYLH---SQNVI 138

Query: 458 HRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTST 517
           HRD+K  NILL    + KL DFG A       + + + +VGT  ++APE+ +        
Sbjct: 139 HRDIKSDNILLSKDGSVKLADFGFAAQLTKEKSKRNS-VVGTPYWMAPEVIKRKDYGPKV 197

Query: 518 DVYSYGILMLEVACG 532
           D++S GI+ +E+A G
Sbjct: 198 DIWSLGIMCIEMAEG 212

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score =  100 bits (250), Expect = 1e-23
 Identities = 69/204 (33%), Positives = 104/204 (50%), Gaps = 23/204 (11%)

Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRI--GHNSQQGMKEFVA---EIMSMGRLRHRNLVQ 391
           L+G G FGRVY       G E+A+K++    +S +  KE  A   EI  +  L+H  +VQ
Sbjct: 9   LLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQ 68

Query: 392 LHGWCRKQDELLLVY-DYVPNGSLDKLLFDKDH-KLRKLLTWDQRYKILIGIAQSLLYLH 449
            +G C + DE L ++ +Y+P GS+      KD  K    LT     K    I + + YLH
Sbjct: 69  YYG-CLRDDETLSIFMEYMPGGSV------KDQLKAYGALTETVTRKYTRQILEGVEYLH 121

Query: 450 EECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK----IYEHGANPQTTHIVGTLGYLAP 505
              +  +VHRD+K +NIL D+  N KLGDFG +K    I   G   ++    GT  +++P
Sbjct: 122 ---SNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSSGTGMKSVT--GTPYWMSP 176

Query: 506 ELTRTGKATTSTDVYSYGILMLEV 529
           E+          DV+S G  ++E+
Sbjct: 177 EVISGEGYGRKADVWSVGCTVVEM 200

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score =  100 bits (251), Expect = 1e-23
 Identities = 61/208 (29%), Positives = 103/208 (49%), Gaps = 19/208 (9%)

Query: 338 VGSGGFGRVYRGLMPSLGLE-----VAIKRI-GHNSQQGMKEFVAEIMSMGRLRHRNLVQ 391
           +G G FG+V+ G    L  E     VA+K +    S    K+F  E   +   +H N+V+
Sbjct: 13  LGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVK 72

Query: 392 LHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKL---------LTWDQRYKILIGIA 442
            +G C + D  ++V++Y+ +G L+K L         L         LT  Q  +I + IA
Sbjct: 73  FYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIA 132

Query: 443 QSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IYEHGANPQTTHIVGTLG 501
             ++YL    +Q  VHRD+   N L+   L  K+GDFG+++ +Y         H +  + 
Sbjct: 133 SGMVYL---ASQHFVHRDLATRNCLVGYDLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIR 189

Query: 502 YLAPELTRTGKATTSTDVYSYGILMLEV 529
           ++ PE     K TT +DV+S+G+++ E+
Sbjct: 190 WMPPESIMYRKFTTESDVWSFGVVLWEI 217

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 98.7 bits (246), Expect = 4e-23
 Identities = 67/241 (27%), Positives = 115/241 (47%), Gaps = 11/241 (4%)

Query: 332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIG-HNSQQGMK-EFVAEIMSMGRLRHRNL 389
           F   N +G G FG V++ +  +     A+K+I      +  + E + E   + +L    +
Sbjct: 2   FEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYI 61

Query: 390 VQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKL-LTWDQRYKILIGIAQSLLYL 448
           ++ +     + +L +V +Y  NG L KLL       R   L  DQ ++  I I   L +L
Sbjct: 62  IRYYESFLDKGKLNIVMEYAENGDLHKLL----KMQRGRPLPEDQVWRFFIQILLGLAHL 117

Query: 449 HEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELT 508
           H   +++++HRD+K  N+ LD Y N K+GD G+AK+     N   T IVGT  YL+PEL 
Sbjct: 118 H---SKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFANT-IVGTPYYLSPELC 173

Query: 509 RTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTL 568
                   +DV++ G+++ E   G+   +     A +L +       +    +Q + Q +
Sbjct: 174 EDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRGVFPPVSQMYSQQLAQLI 233

Query: 569 D 569
           D
Sbjct: 234 D 234

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 98.7 bits (246), Expect = 6e-23
 Identities = 67/219 (30%), Positives = 111/219 (50%), Gaps = 37/219 (16%)

Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIK------RIGHNSQQGMKEFV----AEIMSMGRLRH 386
           L+G G +GRVY  L  + G  +A+K       I        K+ V    +EI ++  L H
Sbjct: 8   LIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDH 67

Query: 387 RNLVQLHGWCRKQDELLLVYDYVPNGSLDKLL-----FDKDHKLRKLLTWDQRYKILIGI 441
            N+VQ  G+   ++ L +  +YVP GS+   L     F++   L +  T     ++L G+
Sbjct: 68  LNIVQYLGFETTEEYLSIFLEYVPGGSIGSCLRTYGRFEEQ--LVRFFT----EQVLEGL 121

Query: 442 AQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK----IYEHGANPQTTHIV 497
           A    YLH   ++ ++HRD+K  N+L+D     K+ DFG++K    IY    N Q   + 
Sbjct: 122 A----YLH---SKGILHRDLKADNLLVDADGICKISDFGISKKSDDIY---DNDQNMSMQ 171

Query: 498 GTLGYLAPELTRTGKATTS--TDVYSYGILMLEVACGRR 534
           G++ ++APE+  +     S   D++S G ++LE+  GRR
Sbjct: 172 GSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRR 210

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 98.5 bits (246), Expect = 6e-23
 Identities = 62/209 (29%), Positives = 94/209 (44%), Gaps = 25/209 (11%)

Query: 332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQ 391
           +     +GSG +G VY+    + G  VAIK I        +    EI  +   RH N+V 
Sbjct: 5   YELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVA 64

Query: 392 LHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIA-------QS 444
             G   ++D+L +V +Y   GSL  +        R  L+  Q       IA       + 
Sbjct: 65  YFGSYLRRDKLWIVMEYCGGGSLQDIY----QVTRGPLSELQ-------IAYVCRETLKG 113

Query: 445 LLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLA 504
           L YLHE      +HRD+K +NILL    + KL DFG++         + + I GT  ++A
Sbjct: 114 LAYLHE---TGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIAKRKSFI-GTPYWMA 169

Query: 505 PELT---RTGKATTSTDVYSYGILMLEVA 530
           PE+    R G      D+++ GI  +E+A
Sbjct: 170 PEVAAVERKGGYDGKCDIWALGITAIELA 198

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 97.8 bits (244), Expect = 1e-22
 Identities = 65/200 (32%), Positives = 102/200 (51%), Gaps = 26/200 (13%)

Query: 339 GSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMK--EFVAEIMSMGRLRHRNLVQLHGWC 396
           G+G FG V+ G       +VA+K +   +   M    F+ E   M +LRH  LVQL+  C
Sbjct: 15  GAGQFGEVWMGTWNG-TTKVAVKTLKPGT---MSPEAFLQEAQIMKKLRHDKLVQLYAVC 70

Query: 397 RKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIG----IAQSLLYLHEEC 452
            +++ + +V +Y+  GSL  L F K  + +KL     R   L+     IA+ + YL    
Sbjct: 71  SEEEPIYIVTEYMSKGSL--LDFLKSGEGKKL-----RLPQLVDMAAQIAEGMAYLES-- 121

Query: 453 NQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGT---LGYLAPELTR 509
            +  +HRD+   NIL+   L  K+ DFGLA++ E   +  T    G    + + APE   
Sbjct: 122 -RNYIHRDLAARNILVGENLVCKIADFGLARLIED--DEYTAR-EGAKFPIKWTAPEAAN 177

Query: 510 TGKATTSTDVYSYGILMLEV 529
            G+ T  +DV+S+GIL+ E+
Sbjct: 178 YGRFTIKSDVWSFGILLTEI 197

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 98.2 bits (245), Expect = 1e-22
 Identities = 61/206 (29%), Positives = 91/206 (44%), Gaps = 23/206 (11%)

Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIK--RIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHG 394
           +VG G +G V +    + G  VAIK  +   + +   K  + E+  + +LRH N+V L  
Sbjct: 8   VVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKE 67

Query: 395 WCRKQDELLLVYDYVPNGSLDKLLFDK---DHKLRKLLTWDQRYKILIGIAQSLLYLHEE 451
             R++  L LV++YV    L+ L            +   W         + Q++ Y H  
Sbjct: 68  AFRRKGRLYLVFEYVERTLLELLEASPGGLPPDAVRSYIWQ--------LLQAIAYCHS- 118

Query: 452 CNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL---- 507
               ++HRD+KP NIL+      KL DFG A+          T  V T  Y APEL    
Sbjct: 119 --HNIIHRDIKPENILVSESGVLKLCDFGFARALRARPASPLTDYVATRWYRAPELLVGD 176

Query: 508 TRTGKATTSTDVYSYGILMLEVACGR 533
           T  GK     DV++ G +M E+  G 
Sbjct: 177 TNYGKP---VDVWAIGCIMAELLDGE 199

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 97.1 bits (242), Expect = 2e-22
 Identities = 65/218 (29%), Positives = 110/218 (50%), Gaps = 12/218 (5%)

Query: 331 GFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKR--IGHNSQQGMKEFVAEIMSMGRLRHRN 388
            F     +G G +G VY+    S     A+K   +G  SQ+  ++ V EI  +  + H N
Sbjct: 1   DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPN 60

Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYL 448
           ++         ++L +V +Y P G L K +  K  K RKL+   + ++I I + + L  L
Sbjct: 61  IISYKEAFLDGNKLCIVMEYAPFGDLSKAI-SKRKKKRKLIPEQEIWRIFIQLLRGLQAL 119

Query: 449 HEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHG-ANPQTTHIVGTLGYLAPEL 507
           HE   Q+++HRD+K +NILL      K+GD G++K+ +   A  Q     GT  Y+APE+
Sbjct: 120 HE---QKILHRDLKSANILLVANDLVKIGDLGISKVLKKNMAKTQI----GTPHYMAPEV 172

Query: 508 TRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAEL 545
            +    +  +D++S G L+ E+A      E  ++  +L
Sbjct: 173 WKGRPYSYKSDIWSLGCLLYEMATFAPPFE-ARSMQDL 209

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 96.6 bits (241), Expect = 4e-22
 Identities = 54/198 (27%), Positives = 94/198 (47%), Gaps = 19/198 (9%)

Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRI-GHNSQQGMKEFVA-EIMSMGRLRHRNLVQLHGW 395
           +G G  G V++      G  VA+K++     + G+      EI ++   +H  +V+L   
Sbjct: 8   IGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDV 67

Query: 396 CRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRY--KILIGIAQSLLYLHEECN 453
                  +LV +Y+P   L ++L D++  L +     + Y   +L G+A    Y+H    
Sbjct: 68  FPHGSGFVLVMEYMP-SDLSEVLRDEERPLPEAQV--KSYMRMLLKGVA----YMHAN-- 118

Query: 454 QRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL---TRT 510
             ++HRD+KP+N+L+      K+ DFGLA+++        +H V T  Y APEL    R 
Sbjct: 119 -GIMHRDLKPANLLISADGVLKIADFGLARLFSEEEPRLYSHQVATRWYRAPELLYGAR- 176

Query: 511 GKATTSTDVYSYGILMLE 528
            K     D+++ G +  E
Sbjct: 177 -KYDPGVDLWAVGCIFAE 193

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score = 96.8 bits (241), Expect = 4e-22
 Identities = 68/202 (33%), Positives = 111/202 (54%), Gaps = 17/202 (8%)

Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEF-VAEIMSMGRLRHRNLVQLHGWC 396
           +G G +  VY+G   + G  VA+K I  ++++G     + EI  M  L+H N+V+LH   
Sbjct: 8   LGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVI 67

Query: 397 RKQDELLLVYDYVPNGSLDKLLFDKDHK--LRKLLTWDQRYKILIGIAQSLLYLHEECNQ 454
             +++L+LV++Y+ +  L K +     +  L         Y++L GIA    + HE    
Sbjct: 68  HTENKLMLVFEYM-DKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIA----FCHE---N 119

Query: 455 RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL---TRTG 511
           RV+HRD+KP N+L++     KL DFGLA+ +    N  +  +V TL Y AP++   +RT 
Sbjct: 120 RVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNTFSNEVV-TLWYRAPDVLLGSRT- 177

Query: 512 KATTSTDVYSYGILMLEVACGR 533
             +TS D++S G +M E+  GR
Sbjct: 178 -YSTSIDIWSVGCIMAEMITGR 198

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score = 96.0 bits (239), Expect = 4e-22
 Identities = 58/197 (29%), Positives = 97/197 (49%), Gaps = 9/197 (4%)

Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +G+G FG V+ GL  +    VA+K +   +    K+F+AE   M +LRH  L+QL+  C 
Sbjct: 14  LGAGQFGEVWEGLW-NNTTPVAVKTLKPGTMD-PKDFLAEAQIMKKLRHPKLIQLYAVCT 71

Query: 398 KQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVV 457
            ++ + +V + +  GSL + L     +  KL    Q   +   +A  + YL     Q  +
Sbjct: 72  LEEPIYIVTELMKYGSLLEYLQGGAGRALKL---PQLIDMAAQVASGMAYLEA---QNYI 125

Query: 458 HRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTST 517
           HRD+   N+L+      K+ DFGLA++ +             + + APE     + +  +
Sbjct: 126 HRDLAARNVLVGENNICKVADFGLARVIKEDIYEAREGAKFPIKWTAPEAALYNRFSIKS 185

Query: 518 DVYSYGILMLE-VACGR 533
           DV+S+GIL+ E V  GR
Sbjct: 186 DVWSFGILLTEIVTYGR 202

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 95.2 bits (237), Expect = 6e-22
 Identities = 63/200 (31%), Positives = 100/200 (50%), Gaps = 16/200 (8%)

Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +GSG FG V+ G      ++VAIK I         +F+ E   M +L H NLVQL+G C 
Sbjct: 12  LGSGQFGVVHLGKWRGK-IDVAIKMI-REGAMSEDDFIEEAKVMMKLSHPNLVQLYGVCT 69

Query: 398 KQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVV 457
           KQ  + +V +Y+ NG L   L ++  KL      D    +   + +++ YL        +
Sbjct: 70  KQRPIFIVTEYMANGCLLNYLRERKGKLGTEWLLD----MCSDVCEAMEYLESNG---FI 122

Query: 458 HRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGT---LGYLAPELTRTGKAT 514
           HRD+   N L+      K+ DFGLA+      + Q T   GT   + +  PE+    + +
Sbjct: 123 HRDLAARNCLVGEDNVVKVSDFGLARYV---LDDQYTSSQGTKFPVKWAPPEVFDYSRFS 179

Query: 515 TSTDVYSYGILMLEV-ACGR 533
           + +DV+S+G+LM EV + G+
Sbjct: 180 SKSDVWSFGVLMWEVFSEGK 199

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score = 95.6 bits (238), Expect = 9e-22
 Identities = 60/210 (28%), Positives = 99/210 (47%), Gaps = 21/210 (10%)

Query: 338 VGSGGFGRVYRGLMPSLGLE-----VAIKRIGHN-SQQGMKEFVAEIMSMGRLRHRNLVQ 391
           +G G FG+VY+G +           VAIK +  N   +  +EF  E   M  L+H N+V 
Sbjct: 13  LGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVC 72

Query: 392 LHGWCRKQDELLLVYDYVPNGSLDKLLF-----------DKDHKLRKLLTWDQRYKILIG 440
           L G C K+    ++++Y+ +G L + L              D  ++  L       I I 
Sbjct: 73  LLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQ 132

Query: 441 IAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IYEHGANPQTTHIVGT 499
           IA  + YL    +   VHRD+   N L+   L  K+ DFGL++ IY        +  +  
Sbjct: 133 IAAGMEYL---SSHHFVHRDLAARNCLVGEGLTVKISDFGLSRDIYSADYYRVQSKSLLP 189

Query: 500 LGYLAPELTRTGKATTSTDVYSYGILMLEV 529
           + ++ PE    GK TT +D++S+G+++ E+
Sbjct: 190 VRWMPPEAILYGKFTTESDIWSFGVVLWEI 219

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 94.7 bits (236), Expect = 1e-21
 Identities = 55/204 (26%), Positives = 91/204 (44%), Gaps = 15/204 (7%)

Query: 335 QNLVGSGGFGRVYRGLMPSLGLEVAIKRIG---HNSQQGMKEFVAEIMSMGRLRHRNLVQ 391
             ++G G FG+V            A+K +       +  ++  + E   +  L H  LV 
Sbjct: 5   LRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVN 64

Query: 392 LHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIG-IAQSLLYLHE 450
           L    + ++ + LV D +  G L      + H  +K+   +++ K  I  I  +L YLH 
Sbjct: 65  LWYSFQDEENMYLVVDLLLGGDL------RYHLSQKVKFSEEQVKFWICEIVLALEYLHS 118

Query: 451 ECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRT 510
              + ++HRD+KP NILLD   +  + DF +A          TT   GT GY+APE+   
Sbjct: 119 ---KGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTL--TTSTSGTPGYMAPEVLCR 173

Query: 511 GKATTSTDVYSYGILMLEVACGRR 534
              + + D +S G+   E   G+R
Sbjct: 174 QGYSVAVDWWSLGVTAYECLRGKR 197

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 94.7 bits (236), Expect = 1e-21
 Identities = 61/204 (29%), Positives = 94/204 (46%), Gaps = 10/204 (4%)

Query: 335 QNLVGSGGFGRVYRGLMPSLGLEVAIKRIG-HNSQQGMKEFVAEIMSMGRLRHRNLVQLH 393
             ++G G    VY  +      +VAIKRI     Q  + E   E+ +M +  H N+V+ +
Sbjct: 6   IEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYY 65

Query: 394 GWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECN 453
                 DEL LV  Y+  GSL  ++  K    R  L       +L  + + L YLH    
Sbjct: 66  TSFVVGDELWLVMPYLSGGSLLDIM--KSSYPRGGLDEAIIATVLKEVLKGLEYLHS--- 120

Query: 454 QRVVHRDVKPSNILLDTYLNAKLGDFGL-AKIYEHGANPQTTH--IVGTLGYLAPELTRT 510
              +HRD+K  NILL    + K+ DFG+ A + + G   +      VGT  ++APE+   
Sbjct: 121 NGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVMEQ 180

Query: 511 GKATTS-TDVYSYGILMLEVACGR 533
                   D++S+GI  +E+A G 
Sbjct: 181 VHGYDFKADIWSFGITAIELATGA 204

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 94.9 bits (237), Expect = 2e-21
 Identities = 59/201 (29%), Positives = 98/201 (48%), Gaps = 19/201 (9%)

Query: 336 NLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKE---FVA--EIMSMGRLRHRNLV 390
             +G G +  VY+      G  VAIK+I    ++  K+   F A  EI  +  L+H N++
Sbjct: 6   KKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNII 65

Query: 391 QLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHE 450
            L      +  + LV++++    L+K++ DK      +LT       ++   + L YLH 
Sbjct: 66  GLLDVFGHKSNINLVFEFME-TDLEKVIKDK----SIVLTPADIKSYMLMTLRGLEYLH- 119

Query: 451 ECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQT--THIVGTLGYLAPELT 508
             +  ++HRD+KP+N+L+ +    KL DFGLA+ +    +P    TH V T  Y APEL 
Sbjct: 120 --SNWILHRDLKPNNLLIASDGVLKLADFGLARSF---GSPNRKMTHQVVTRWYRAPELL 174

Query: 509 RTGKA-TTSTDVYSYGILMLE 528
              +      D++S G +  E
Sbjct: 175 FGARHYGVGVDMWSVGCIFAE 195

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|173886 cd01951, lectin_L-type, legume lectins

 Score = 92.1 bits (229), Expect = 4e-21
 Identities = 61/243 (25%), Positives = 100/243 (41%), Gaps = 26/243 (10%)

Query: 9   TSFLYNGFL---HANLSLEGAAYIST-SGILTVTNKSEGLIGHALYPNPLRFKTSNKSVA 64
           TS  ++ F     +N  L G+A ++T SG+L +T  +    G A Y  P+          
Sbjct: 1   TSLNFSNFSNNNQSNWQLNGSATLTTDSGVLRLTPDTGNQAGSAWYKTPIDLSK------ 54

Query: 65  IDFRTNFVFSILPKYPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTKFSTRML 124
            DF T F F  L      G  G+AF++   N P   L     G   +            +
Sbjct: 55  -DFTTTFKFY-LGTKGTNGADGIAFVL--QNDPAGALGGGG-GGGGLGYGGIGNS----V 105

Query: 125 AVEFDIIQNTELIDINDNHVGIDISSL-ISSASEPASYYSGNNHRIPILLRSGDPIQAWV 183
           AVEFD  +N +  D N NH+ ID++    ++A   +   +   +   +    G+     +
Sbjct: 106 AVEFDTYKNDDNNDPNGNHISIDVNGNGNNTALATSLGSASLPNGTGL----GNEHTVRI 161

Query: 184 DYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLITASHNVHGW 243
            Y      + V +            I++P+DL  +     Y GF+ASTG +T  H++  W
Sbjct: 162 TYDPTTNTLTVYL--DNGSTLTSLDITIPVDLIQLGPTKAYFGFTASTGGLTNLHDILNW 219

Query: 244 SIS 246
           S +
Sbjct: 220 SFT 222

The L-type (legume-type) lectins are a highly diverse family of carbohydrate binding proteins that generally display no enzymatic activity toward the sugars they bind. This family includes arcelin, concanavalinA, the lectin-like receptor kinases, the ERGIC-53/VIP36/EMP46 type1 transmembrane proteins, and an alpha-amylase inhibitor. L-type lectins have a dome-shaped beta-barrel carbohydrate recognition domain with a curved seven-stranded beta-sheet referred to as the "front face" and a flat six-stranded beta-sheet referred to as the "back face". This domain homodimerizes so that adjacent back sheets form a contiguous 12-stranded sheet and homotetramers occur by a back-to-back association of these homodimers. Though L-type lectins exhibit both sequence and structural similarity to one another, their carbohydrate binding specificities differ widely. Length = 223

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 93.5 bits (233), Expect = 4e-21
 Identities = 63/216 (29%), Positives = 101/216 (46%), Gaps = 18/216 (8%)

Query: 332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIG-HNSQQGMKEFVAEIMSMGRLRHRNLV 390
           F     +G G FG VY+ +       VAIK I    ++  +++   EI  + + R   + 
Sbjct: 3   FTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYIT 62

Query: 391 QLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRY--KILIGIAQSLLYL 448
           + +G   K  +L ++ +Y   GS   LL     K  KL   D+ Y   IL  +   L YL
Sbjct: 63  KYYGSFLKGSKLWIIMEYCGGGSCLDLL-----KPGKL---DETYIAFILREVLLGLEYL 114

Query: 449 HEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELT 508
           HE   +  +HRD+K +NILL    + KL DFG++       + + T  VGT  ++APE+ 
Sbjct: 115 HE---EGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSKRNT-FVGTPFWMAPEVI 170

Query: 509 RTGKATTSTDVYSYGILMLEVACG---RRSIEPQKA 541
           +        D++S GI  +E+A G      + P + 
Sbjct: 171 KQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRV 206

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 92.8 bits (231), Expect = 5e-21
 Identities = 82/283 (28%), Positives = 126/283 (44%), Gaps = 42/283 (14%)

Query: 337 LVGSGGFGRVYRGLMPSLG---LEVAIKRIGHNSQQG-MKEFVAEIMSMGRLRHRNLVQL 392
            +G G FG V RG   + G   + VA+K +  +     M +F+ E   M  L H NL++L
Sbjct: 2   KLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRL 61

Query: 393 HGWCRKQDELLLVYDYVPNGSL-DKLLFDKDHKLRKLLT---WDQRYKILIGIAQSLLYL 448
           +G       L++V +  P GSL D+L   +   L   L     D   +I  G+     YL
Sbjct: 62  YGVVL-THPLMMVTELAPLGSLLDRL---RKDALGHFLISTLCDYAVQIANGMR----YL 113

Query: 449 HEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTT--HIVGTLGYLAPE 506
                +R +HRD+   NILL +    K+GDFGL +      +      H+     + APE
Sbjct: 114 ES---KRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEHLKVPFAWCAPE 170

Query: 507 LTRTGKATTSTDVYSYGILMLEV-ACGRRSIEPQKAAAELLLVDWVKELHLEG-EITQAI 564
             RT   + ++DV+ +G+ + E+   G    EP           W     L G +I + I
Sbjct: 171 SLRTRTFSHASDVWMFGVTLWEMFTYGE---EP-----------WA---GLSGSQILKKI 213

Query: 565 DQTLDYYDLAEA--ELVLNLGLFCSAPNPVYRPDMRRVVEFLL 605
           D+  +  +  EA  + + N+ L C A NP  RP    + EFL 
Sbjct: 214 DKEGERLERPEACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 92.8 bits (231), Expect = 6e-21
 Identities = 59/204 (28%), Positives = 102/204 (50%), Gaps = 26/204 (12%)

Query: 339 GSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGM-KEFVAEIMSMGRLRHRNLVQLHGWCR 397
           G+G  G V + L    G  +A+K I     + + K+ + E+  + +     +V  +G   
Sbjct: 10  GAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFY 69

Query: 398 KQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVV 457
              ++ +  +Y+  GSLDK+L     +++  +      KI + + + L YLHE    +++
Sbjct: 70  NNGDISICMEYMDGGSLDKIL----KEVQGRIPERILGKIAVAVLKGLTYLHE--KHKII 123

Query: 458 HRDVKPSNILLDTYLNAKLGDFG--------LAKIYEHGANPQTTHIVGTLGYLAPELTR 509
           HRDVKPSNIL+++    KL DFG        LAK +           VGT  Y+APE  +
Sbjct: 124 HRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAKTF-----------VGTSSYMAPERIQ 172

Query: 510 TGKATTSTDVYSYGILMLEVACGR 533
               +  +D++S G+ ++E+A GR
Sbjct: 173 GNDYSVKSDIWSLGLSLIELATGR 196

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros

 Score = 93.0 bits (231), Expect = 6e-21
 Identities = 82/287 (28%), Positives = 131/287 (45%), Gaps = 38/287 (13%)

Query: 336 NLVGSGGFGRVYRG-----LMPSLG-LEVAIKRIGHNS-QQGMKEFVAEIMSMGRLRHRN 388
           N +GSG FG VY G     L P  G + VA+K +   +  Q  KEF+ E   M    H N
Sbjct: 1   NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPN 60

Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRK----LLTWDQRYKILIGIAQS 444
           +V+L G C   +   ++ + +  G L  L + +D ++ +    LLT  +   I + +A+ 
Sbjct: 61  IVKLLGVCLLNEPQYIIMELMEGGDL--LSYLRDARVERFGPPLLTLKELLDICLDVAKG 118

Query: 445 LLYLHEECNQRVVHRDVKPSNILL-----DTYLNAKLGDFGLAK-IYEHGANPQTTHIVG 498
            +YL +      +HRD+   N L+     D     K+GDFGLA+ IY+     +    + 
Sbjct: 119 CVYLEQ---MHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYRKEGEGLL 175

Query: 499 TLGYLAPELTRTGKATTSTDVYSYGILMLEV-ACGRRSIEPQKAAAELLLVDWVKELHLE 557
            + ++APE    GK TT +DV+S+G+LM E+   G+   +P  A     ++  V      
Sbjct: 176 PVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQ---QPYPALNNQEVLQHVTA---G 229

Query: 558 GEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL 604
           G + +  +     Y L            C A +P  RP   R+ E L
Sbjct: 230 GRLQKPENCPDKIYQLM---------TNCWAQDPSERPTFDRIQEIL 267

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score = 93.6 bits (233), Expect = 7e-21
 Identities = 70/220 (31%), Positives = 107/220 (48%), Gaps = 33/220 (15%)

Query: 323 AELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIG-HNSQQGMK-EFVAEIMS 380
               SVT+ F + N +G G +G VYR    + G  VA+K++   N + G+    + EI  
Sbjct: 1   GRCRSVTE-FEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITL 59

Query: 381 MGRLRHRNLVQLH----GWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLL------- 429
           +  LRH N+V+L     G  +  D + LV +Y             +  L  LL       
Sbjct: 60  LLNLRHPNIVELKEVVVG--KHLDSIFLVMEYC------------EQDLASLLDNMPTPF 105

Query: 430 TWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGA 489
           +  Q   +++ + + L YLHE     ++HRD+K SN+LL      K+ DFGLA+ Y   A
Sbjct: 106 SESQVKCLMLQLLRGLQYLHENF---IIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPA 162

Query: 490 NPQTTHIVGTLGYLAPE-LTRTGKATTSTDVYSYGILMLE 528
            P T  +V TL Y APE L      TT+ D+++ G ++ E
Sbjct: 163 KPMTPKVV-TLWYRAPELLLGCTTYTTAIDMWAVGCILAE 201

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

 Score = 92.3 bits (229), Expect = 7e-21
 Identities = 65/214 (30%), Positives = 108/214 (50%), Gaps = 17/214 (7%)

Query: 332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQ 391
            GE   +G G FG V +G     G +VA+K I        + F+ E   M +L H+NLV+
Sbjct: 10  LGEI--IGEGEFGAVLQG--EYTGQKVAVKNI--KCDVTAQAFLEETAVMTKLHHKNLVR 63

Query: 392 LHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEE 451
           L G       L +V + +  G+L   L  +    R L++  Q  +  + +A+ + YL   
Sbjct: 64  LLGVILHNG-LYIVMELMSKGNLVNFLRTRG---RALVSVIQLLQFSLDVAEGMEYLE-- 117

Query: 452 CNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTG 511
            ++++VHRD+   NIL+     AK+ DFGLA++   G +     +  T    APE  +  
Sbjct: 118 -SKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGVDNSKLPVKWT----APEALKHK 172

Query: 512 KATTSTDVYSYGILMLEVACGRRSIEPQKAAAEL 545
           K ++ +DV+SYG+L+ EV    R+  P+ +  E+
Sbjct: 173 KFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEV 206

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score = 91.9 bits (228), Expect = 9e-21
 Identities = 58/197 (29%), Positives = 100/197 (50%), Gaps = 19/197 (9%)

Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRI--GHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGW 395
           +GSG FG V+ G       +VAIK I  G  S++   +F+ E   M +L H  LVQL+G 
Sbjct: 12  IGSGQFGLVWLGYWLE-KRKVAIKTIREGAMSEE---DFIEEAQVMMKLSHPKLVQLYGV 67

Query: 396 CRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQR 455
           C ++  + LV++++ +G L   L  +    R   + +    + + + + + YL       
Sbjct: 68  CTERSPICLVFEFMEHGCLSDYLRAQ----RGKFSQETLLGMCLDVCEGMAYLESSN--- 120

Query: 456 VVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGT---LGYLAPELTRTGK 512
           V+HRD+   N L+      K+ DFG+ +      + Q T   GT   + + +PE+    K
Sbjct: 121 VIHRDLAARNCLVGENQVVKVSDFGMTRFV---LDDQYTSSTGTKFPVKWSSPEVFSFSK 177

Query: 513 ATTSTDVYSYGILMLEV 529
            ++ +DV+S+G+LM EV
Sbjct: 178 YSSKSDVWSFGVLMWEV 194

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 91.5 bits (228), Expect = 1e-20
 Identities = 58/200 (29%), Positives = 95/200 (47%), Gaps = 15/200 (7%)

Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIG--HNSQQGMKEFV-AEIMSMGRLRHRNLVQLHG 394
           +G GGFGRV    + S     A+K +   H  + G +E + +E   +    H  +V+L+ 
Sbjct: 1   LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYR 60

Query: 395 WCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQ 454
             + +  + ++ +Y   G L    +           +  R+  +  +  +  YLH   N+
Sbjct: 61  TFKDKKYIYMLMEYCLGGEL----WTILRDRGLFDEYTARF-YIACVVLAFEYLH---NR 112

Query: 455 RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTH-IVGTLGYLAPELTRTGKA 513
            +++RD+KP N+LLD+    KL DFG AK  + G   Q T    GT  Y+APE+      
Sbjct: 113 GIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSG---QKTWTFCGTPEYVAPEIILNKGY 169

Query: 514 TTSTDVYSYGILMLEVACGR 533
             S D +S GIL+ E+  GR
Sbjct: 170 DFSVDYWSLGILLYELLTGR 189

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

 Score = 91.6 bits (227), Expect = 1e-20
 Identities = 67/196 (34%), Positives = 102/196 (52%), Gaps = 15/196 (7%)

Query: 335 QNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHG 394
              +G G FG V  G     G +VA+K I +++    + F+AE   M +LRH NLVQL G
Sbjct: 11  LQTIGKGEFGDVMLG--DYRGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLG 66

Query: 395 -WCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECN 453
               ++  L +V +Y+  GSL   L  +    R +L  D   K  + + +++ YL  E N
Sbjct: 67  VIVEEKGGLYIVTEYMAKGSLVDYLRSRG---RSVLGGDCLLKFSLDVCEAMEYL--EAN 121

Query: 454 QRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKA 513
              VHRD+   N+L+     AK+ DFGL K  E  +   T  +   + + APE  R  K 
Sbjct: 122 N-FVHRDLAARNVLVSEDNVAKVSDFGLTK--EASSTQDTGKL--PVKWTAPEALREKKF 176

Query: 514 TTSTDVYSYGILMLEV 529
           +T +DV+S+GIL+ E+
Sbjct: 177 STKSDVWSFGILLWEI 192

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 92.3 bits (229), Expect = 1e-20
 Identities = 65/212 (30%), Positives = 100/212 (47%), Gaps = 34/212 (16%)

Query: 335 QNLVGSGGFGRV----YRGLMPSLGLEVAIKRI-GHNSQQGMKEFVAEIMSMGRLRHRNL 389
             ++G G FG+V    Y       G  VA+K +     QQ    +  EI  +  L H N+
Sbjct: 9   IRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENI 68

Query: 390 VQLHGWCRKQDE--LLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLY 447
           V+  G C +Q    L L+ +YVP GSL   L      L +LL + Q+      I + + Y
Sbjct: 69  VKYKGCCSEQGGKGLQLIMEYVPLGSLRDYLPKHKLNLAQLLLFAQQ------ICEGMAY 122

Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK----------IYEHGANPQTTHIV 497
           LH   +Q  +HRD+   N+LLD     K+GDFGLAK          + E G +P      
Sbjct: 123 LH---SQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSP------ 173

Query: 498 GTLGYLAPELTRTGKATTSTDVYSYGILMLEV 529
             + + A E  +  K + ++DV+S+G+ + E+
Sbjct: 174 --VFWYAVECLKENKFSYASDVWSFGVTLYEL 203

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 92.1 bits (229), Expect = 1e-20
 Identities = 65/211 (30%), Positives = 107/211 (50%), Gaps = 35/211 (16%)

Query: 337 LVGSGGFGRV----YRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQL 392
            +G G FG V    Y  L  + G  VA+K++ H++ + +++F  EI  +  L+H N+V+ 
Sbjct: 11  QLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKY 70

Query: 393 HGWC--RKQDELLLVYDYVPNGSLDKLLFDKDHKL--RKLLTWDQRYKILIGIAQSLLYL 448
            G C    +  L LV +Y+P GSL   L     +L  RKLL +  +      I + + YL
Sbjct: 71  KGVCYSAGRRNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQ------ICKGMEYL 124

Query: 449 HEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIY----------EHGANPQTTHIVG 498
                +R VHRD+   NIL+++    K+GDFGL K+           E G +P       
Sbjct: 125 GS---KRYVHRDLATRNILVESENRVKIGDFGLTKVLPQDKEYYKVREPGESP------- 174

Query: 499 TLGYLAPELTRTGKATTSTDVYSYGILMLEV 529
            + + APE     K + ++DV+S+G+++ E+
Sbjct: 175 -IFWYAPESLTESKFSVASDVWSFGVVLYEL 204

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 91.4 bits (227), Expect = 2e-20
 Identities = 67/211 (31%), Positives = 110/211 (52%), Gaps = 22/211 (10%)

Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRI--------GHNSQQGMKEFVA-EIMSMGRLRHR 387
           L+GSG FG VY G+  S G  +A+K++          + ++ M + +A EI  +  L+H 
Sbjct: 7   LIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHE 66

Query: 388 NLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLY 447
           N+VQ  G     D L +  +YVP GS+  LL +      + L  +   +IL G    L Y
Sbjct: 67  NIVQYLGSSLDADHLNIFLEYVPGGSVAALL-NNYGAFEETLVRNFVRQILKG----LNY 121

Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEH-----GANPQTTHIVGTLGY 502
           LH   N+ ++HRD+K +NIL+D     K+ DFG++K  E        N     + G++ +
Sbjct: 122 LH---NRGIIHRDIKGANILVDNKGGIKISDFGISKKLEANSLSTKTNGARPSLQGSVFW 178

Query: 503 LAPELTRTGKATTSTDVYSYGILMLEVACGR 533
           +APE+ +    T   D++S G L++E+  G+
Sbjct: 179 MAPEVVKQTSYTRKADIWSLGCLVVEMLTGK 209

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score = 91.4 bits (227), Expect = 6e-20
 Identities = 64/207 (30%), Positives = 105/207 (50%), Gaps = 25/207 (12%)

Query: 336 NLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVA-EIMSMGRLRHRNLVQLHG 394
           N +GSG  G VY+ +    G   A+K I  N +  ++  +  EI  +  + H N+V+ H 
Sbjct: 80  NRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHD 139

Query: 395 WCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQ 454
                 E+ ++ +++  GSL+      +  L      D   +IL GIA    YLH    +
Sbjct: 140 MFDHNGEIQVLLEFMDGGSLEGTHIADEQFLA-----DVARQILSGIA----YLHR---R 187

Query: 455 RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRT---- 510
            +VHRD+KPSN+L+++  N K+ DFG+++I     +P  +  VGT+ Y++PE   T    
Sbjct: 188 HIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMDPCNSS-VGTIAYMSPERINTDLNH 246

Query: 511 ----GKATTSTDVYSYGILMLEVACGR 533
               G A    D++S G+ +LE   GR
Sbjct: 247 GAYDGYA---GDIWSLGVSILEFYLGR 270

Length = 353

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score = 89.8 bits (223), Expect = 8e-20
 Identities = 68/204 (33%), Positives = 100/204 (49%), Gaps = 22/204 (10%)

Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVA--EIMSMGRLRHRNLVQLHG 394
           LVG G +G V +      G  VAIK+   +    M + +A  EI  + +LRH NLV L  
Sbjct: 8   LVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIE 67

Query: 395 WCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQ 454
             R++  L LV+++V +  LD L     + L +       ++IL GI     + H   + 
Sbjct: 68  VFRRKKRLYLVFEFVDHTVLDDLE-KYPNGLDESRVRKYLFQILRGIE----FCH---SH 119

Query: 455 RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQT--THIVGTLGYLAPEL----T 508
            ++HRD+KP NIL+      KL DFG A+     A P    T  V T  Y APEL    T
Sbjct: 120 NIIHRDIKPENILVSQSGVVKLCDFGFARTL---AAPGEVYTDYVATRWYRAPELLVGDT 176

Query: 509 RTGKATTSTDVYSYGILMLEVACG 532
           + G+A    D+++ G L+ E+  G
Sbjct: 177 KYGRA---VDIWAVGCLVTEMLTG 197

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 89.8 bits (223), Expect = 8e-20
 Identities = 61/220 (27%), Positives = 102/220 (46%), Gaps = 22/220 (10%)

Query: 330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQG-MKEFVAEIMSMGRLRHRN 388
           +   E + +G G  G V +  + + G+  A+K I  +      K+ + E+      +   
Sbjct: 1   EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPY 60

Query: 389 LVQLHGWC--RKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRY--KILIGIAQS 444
           +V+ +G         + +  +Y   GSLD +        +K+     R   K+L  IA+S
Sbjct: 61  IVKYYGAFLDESSSSIGIAMEYCEGGSLDSIY-------KKVKKRGGRIGEKVLGKIAES 113

Query: 445 LL----YLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTL 500
           +L    YLH    ++++HRD+KPSNILL      KL DFG++       N       GT 
Sbjct: 114 VLKGLSYLHS---RKIIHRDIKPSNILLTRKGQVKLCDFGVSG---ELVNSLAGTFTGTS 167

Query: 501 GYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQK 540
            Y+APE  +    + ++DV+S G+ +LEVA  R    P+ 
Sbjct: 168 FYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEG 207

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 89.4 bits (222), Expect = 9e-20
 Identities = 59/200 (29%), Positives = 105/200 (52%), Gaps = 13/200 (6%)

Query: 339 GSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRK 398
           G G FG+VY+      GL  A K I   S++ +++F+ EI  +   +H N+V L+     
Sbjct: 14  GDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFY 73

Query: 399 QDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVH 458
           +++L ++ ++   G+LD ++     +L + LT  Q   +   + ++L +LH   + +V+H
Sbjct: 74  ENKLWILIEFCDGGALDSIML----ELERGLTEPQIRYVCRQMLEALNFLH---SHKVIH 126

Query: 459 RDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL--TRTGKAT-- 514
           RD+K  NILL    + KL DFG++   +     + T I GT  ++APE+    T K    
Sbjct: 127 RDLKAGNILLTLDGDVKLADFGVSAKNKSTLQKRDTFI-GTPYWMAPEVVACETFKDNPY 185

Query: 515 -TSTDVYSYGILMLEVACGR 533
               D++S GI ++E+A   
Sbjct: 186 DYKADIWSLGITLIELAQME 205

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 89.0 bits (221), Expect = 1e-19
 Identities = 53/211 (25%), Positives = 104/211 (49%), Gaps = 18/211 (8%)

Query: 329 TKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIG---HNSQQGMKEFVAEIMSMGRLR 385
              F  +  +G G F  VY+ +    G  VA+K++        +  ++ + EI  + +L 
Sbjct: 1   LGNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLD 60

Query: 386 HRNLVQLHGWCRKQDELLLVYDYVPNGSLDKLL--FDKDHKLRKLLTWDQRYKILIGIAQ 443
           H N+++      + +EL +V +    G L +++  F K    ++L+     +K  + +  
Sbjct: 61  HPNVIKYLASFIENNELNIVLELADAGDLSRMIKHFKKQ---KRLIPERTIWKYFVQLCS 117

Query: 444 SLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTT---HIVGTL 500
           +L ++H    +R++HRD+KP+N+ +      KLGD GL + +    + +TT    +VGT 
Sbjct: 118 ALEHMHS---KRIMHRDIKPANVFITATGVVKLGDLGLGRFF----SSKTTAAHSLVGTP 170

Query: 501 GYLAPELTRTGKATTSTDVYSYGILMLEVAC 531
            Y++PE          +D++S G L+ E+A 
Sbjct: 171 YYMSPERIHENGYNFKSDIWSLGCLLYEMAA 201

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 89.2 bits (222), Expect = 1e-19
 Identities = 63/216 (29%), Positives = 103/216 (47%), Gaps = 41/216 (18%)

Query: 334 EQNLVGSGGFGRVYRGLMPSLGLEVAIKRIG-HNSQQGMKEF-VAEIMSMGRLR---HRN 388
           E   +G G +G VY+    + G  VA+K++    S++G+    + EI  + +L    H N
Sbjct: 3   ELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPN 62

Query: 389 LVQL----HGWCRKQD-ELLLVYDYV-----------PNGSLDKLLFDKDHKLRKLLTWD 432
           +V+L    HG    ++ +L LV+++V           P   L          ++ L+   
Sbjct: 63  IVRLLDVCHGPRTDRELKLTLVFEHVDQDLATYLSKCPKPGLPP------ETIKDLM--- 113

Query: 433 QRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQ 492
              ++L G+     +LH   + R+VHRD+KP NIL+ +    K+ DFGLA+IY       
Sbjct: 114 --RQLLRGVD----FLH---SHRIVHRDLKPQNILVTSDGQVKIADFGLARIYSF--EMA 162

Query: 493 TTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLE 528
            T +V TL Y APE+       T  D++S G +  E
Sbjct: 163 LTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAE 198

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 88.7 bits (221), Expect = 2e-19
 Identities = 68/207 (32%), Positives = 101/207 (48%), Gaps = 28/207 (13%)

Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMK-------EFVA--EIMSMGRL-RHR 387
           +G G FG VY       G  VAIK+        MK       E +   E+ S+ +L  H 
Sbjct: 7   LGDGTFGSVYLARNKETGELVAIKK--------MKKKFYSWEECMNLREVKSLRKLNEHP 58

Query: 388 NLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLY 447
           N+V+L    R+ DEL  V++Y+  G+L +L+  KD K  K  +      I+  I Q L +
Sbjct: 59  NIVKLKEVFRENDELYFVFEYM-EGNLYQLM--KDRK-GKPFSESVIRSIIYQILQGLAH 114

Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPE- 506
           +H        HRD+KP N+L+      K+ DFGLA+  E  + P  T  V T  Y APE 
Sbjct: 115 IH---KHGFFHRDLKPENLLVSGPEVVKIADFGLAR--EIRSRPPYTDYVSTRWYRAPEI 169

Query: 507 LTRTGKATTSTDVYSYGILMLEVACGR 533
           L R+   ++  D+++ G +M E+   R
Sbjct: 170 LLRSTSYSSPVDIWALGCIMAELYTLR 196

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

 Score = 87.9 bits (218), Expect = 3e-19
 Identities = 72/276 (26%), Positives = 135/276 (48%), Gaps = 31/276 (11%)

Query: 337 LVGSGGFGRVYRGLMPSLGLE-VAIKRIG-HN---------SQQGMKEFVAEIMSMG-RL 384
            +GSG FG VY+    + G   +A+K I  HN           + + + V+E+  +  +L
Sbjct: 7   HLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQL 66

Query: 385 RHRNLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQS 444
           RH N+V+ +    + D L +V D +    L +       K ++  T ++ + I + +  +
Sbjct: 67  RHPNIVRYYKTFLENDRLYIVMDLIEGAPLGEHFNSLKEK-KQRFTEERIWNIFVQMVLA 125

Query: 445 LLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLA 504
           L YLH+E  +R+VHRD+ P+NI+L       + DFGLAK  +     + T +VGT+ Y  
Sbjct: 126 LRYLHKE--KRIVHRDLTPNNIMLGEDDKVTITDFGLAK--QKQPESKLTSVVGTILYSC 181

Query: 505 PELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAI 564
           PE+ +        DV+++G ++ ++     +++P   +  +        L L  +I +A+
Sbjct: 182 PEIVKNEPYGEKADVWAFGCILYQMC----TLQPPFYSTNM--------LSLATKIVEAV 229

Query: 565 DQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRV 600
            + L   +   +E V ++   C  P+   RPD+ +V
Sbjct: 230 YEPLP--EGMYSEDVTDVITSCLTPDAEARPDIIQV 263

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 87.9 bits (218), Expect = 4e-19
 Identities = 62/203 (30%), Positives = 105/203 (51%), Gaps = 19/203 (9%)

Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQG-MKEFVAEIMSMGRLRH---RNLVQL 392
           L+G G +G VYRG     G  VA+K I  ++    + +   E+  + +LR     N+ + 
Sbjct: 8   LIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKY 67

Query: 393 HGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILI--GIAQSLLYLHE 450
           +G   K   L ++ +Y   GS+  L+     K   +    ++Y  +I   +  +L Y+H+
Sbjct: 68  YGSYLKGPRLWIIMEYAEGGSVRTLM-----KAGPI---AEKYISVIIREVLVALKYIHK 119

Query: 451 ECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRT 510
                V+HRD+K +NIL+    N KL DFG+A +    ++ ++T  VGT  ++APE+   
Sbjct: 120 V---GVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSKRST-FVGTPYWMAPEVITE 175

Query: 511 GKA-TTSTDVYSYGILMLEVACG 532
           GK   T  D++S GI + E+A G
Sbjct: 176 GKYYDTKADIWSLGITIYEMATG 198

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score = 87.4 bits (217), Expect = 4e-19
 Identities = 56/205 (27%), Positives = 95/205 (46%), Gaps = 15/205 (7%)

Query: 338 VGSGGFGRVYRGLM-----PSLGLEVAIKRIGHNSQQGMK-EFVAEIMSMGRLRHRNLVQ 391
           +G G FG VY GL            VAIK +  N+    + EF+ E   M      ++V+
Sbjct: 14  LGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVR 73

Query: 392 LHGWCRKQDELLLVYDYVPNGSLDKLLF-----DKDHKLRKLLTWDQRYKILIGIAQSLL 446
           L G        L+V + +  G L   L       +++      T  +  ++   IA  + 
Sbjct: 74  LLGVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMA 133

Query: 447 YLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IYEHGANPQTTHIVGTLGYLAP 505
           YL     ++ VHRD+   N ++   L  K+GDFG+ + IYE     +    +  + ++AP
Sbjct: 134 YLAA---KKFVHRDLAARNCMVAEDLTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 190

Query: 506 ELTRTGKATTSTDVYSYGILMLEVA 530
           E  + G  TT +DV+S+G+++ E+A
Sbjct: 191 ESLKDGVFTTKSDVWSFGVVLWEMA 215

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional

 Score = 87.6 bits (217), Expect = 5e-19
 Identities = 67/202 (33%), Positives = 106/202 (52%), Gaps = 24/202 (11%)

Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIG-HNSQQGMKEF-VAEIMSMGRLRHRNLVQLHGW 395
           +G G +G VY+         +A+K+I      +G+    + EI  +  ++H N+V+L   
Sbjct: 10  IGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDV 69

Query: 396 CRKQDELLLVYDYVPNGSLDKLL-----FDKDHKLRKLLTWDQRYKILIGIAQSLLYLHE 450
              +  L LV++Y+ +  L K +     F K+ +L K   +    +IL GIA    Y H 
Sbjct: 70  VHSEKRLYLVFEYL-DLDLKKHMDSSPDFAKNPRLIKTYLY----QILRGIA----YCH- 119

Query: 451 ECNQRVVHRDVKPSNILLDTYLNA-KLGDFGLAKIYEHGANPQT-THIVGTLGYLAPELT 508
             + RV+HRD+KP N+L+D   NA KL DFGLA+ +  G   +T TH V TL Y APE+ 
Sbjct: 120 --SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAF--GIPVRTFTHEVVTLWYRAPEIL 175

Query: 509 RTGKA-TTSTDVYSYGILMLEV 529
              +  +T  D++S G +  E+
Sbjct: 176 LGSRHYSTPVDIWSVGCIFAEM 197

Length = 294

>gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

 Score = 86.1 bits (213), Expect = 9e-19
 Identities = 62/199 (31%), Positives = 104/199 (52%), Gaps = 23/199 (11%)

Query: 338 VGSGGFGRV----YRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLH 393
           +G+G FG V    +RG       +VAIK I   S     EF+ E   M +L H  LVQL+
Sbjct: 12  LGTGQFGVVKYGKWRG-----QYDVAIKMIKEGSMS-EDEFIEEAKVMMKLSHEKLVQLY 65

Query: 394 GWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECN 453
           G C KQ  + +V +Y+ NG L  L + ++H   K     Q  ++   + + + YL    +
Sbjct: 66  GVCTKQRPIYIVTEYMSNGCL--LNYLREH--GKRFQPSQLLEMCKDVCEGMAYLE---S 118

Query: 454 QRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGT---LGYLAPELTRT 510
           ++ +HRD+   N L+D     K+ DFGL++   +  + + T  VG+   + +  PE+   
Sbjct: 119 KQFIHRDLAARNCLVDDQGCVKVSDFGLSR---YVLDDEYTSSVGSKFPVRWSPPEVLLY 175

Query: 511 GKATTSTDVYSYGILMLEV 529
            K ++ +DV+++G+LM EV
Sbjct: 176 SKFSSKSDVWAFGVLMWEV 194

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 86.0 bits (213), Expect = 9e-19
 Identities = 57/197 (28%), Positives = 96/197 (48%), Gaps = 14/197 (7%)

Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKE-FVAEIMSMGRLRHRNLVQLHGW 395
            +G G FG VY+G++     EVA+K         +K  F+ E   + +  H N+V+L G 
Sbjct: 2   KIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGV 60

Query: 396 CRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQR 455
           C ++  + +V + VP GSL   L  K ++L       +  ++ +  A  + YL  +    
Sbjct: 61  CVQKQPIYIVMELVPGGSLLTFLRKKKNRLTV----KKLLQMSLDAAAGMEYLESKN--- 113

Query: 456 VVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHG---ANPQTTHIVGTLGYLAPELTRTGK 512
            +HRD+   N L+      K+ DFG+++  E G    +     I   + + APE    G+
Sbjct: 114 CIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQI--PIKWTAPEALNYGR 171

Query: 513 ATTSTDVYSYGILMLEV 529
            T+ +DV+SYGIL+ E 
Sbjct: 172 YTSESDVWSYGILLWET 188

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score = 87.2 bits (217), Expect = 1e-18
 Identities = 66/217 (30%), Positives = 104/217 (47%), Gaps = 35/217 (16%)

Query: 335 QNLVGSGGFGRVYRGLMPSLGLEVAIKRIGH--NSQQGMKEFVAEIMSMGRLRHRNLVQL 392
              +GSG +G V   +    G +VAIK+I +  +     K  + EI  +  LRH N++ L
Sbjct: 5   LKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGL 64

Query: 393 HGWCR-----KQDELLLVYDYVPNGSLDKLLFDKD-HKL---RKLLTWDQR----YKILI 439
               R       +++ +V +          L + D HK+    + LT D      Y+IL 
Sbjct: 65  LDILRPPSPEDFNDVYIVTE----------LMETDLHKVIKSPQPLTDDHIQYFLYQILR 114

Query: 440 GIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQT--THIV 497
           G    L YLH   N  V+HRD+KPSNIL+++  + K+ DFGLA+  +   + +   T  V
Sbjct: 115 G----LKYLHS-AN--VIHRDLKPSNILVNSNCDLKICDFGLARGVDPDEDEKGFLTEYV 167

Query: 498 GTLGYLAPELTRTGKA-TTSTDVYSYGILMLEVACGR 533
            T  Y APEL  +    T + D++S G +  E+   +
Sbjct: 168 VTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRK 204

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score = 86.2 bits (214), Expect = 1e-18
 Identities = 64/215 (29%), Positives = 101/215 (46%), Gaps = 34/215 (15%)

Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVA-----EIMSMGRLRHRNLVQL 392
           +G G +G VY+      G  VA+K+I   ++    E V      EI  +  L H N+V+L
Sbjct: 7   IGEGTYGVVYKARDKLTGEIVALKKIRLETE---DEGVPSTAIREISLLKELNHPNIVRL 63

Query: 393 HGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEEC 452
                 +++L LV++++            D  L+K +  D      +       YL++  
Sbjct: 64  LDVVHSENKLYLVFEFL------------DLDLKKYM--DSSPLTGLDPPLIKSYLYQLL 109

Query: 453 N-------QRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQT-THIVGTLGYLA 504
                    RV+HRD+KP N+L+D     KL DFGLA+ +  G   +T TH V TL Y A
Sbjct: 110 QGIAYCHSHRVLHRDLKPQNLLIDREGALKLADFGLARAF--GVPVRTYTHEVVTLWYRA 167

Query: 505 PELTRTGKA-TTSTDVYSYGILMLEVACGRRSIEP 538
           PE+    +  +T  D++S G +  E+   RR + P
Sbjct: 168 PEILLGSRQYSTPVDIWSIGCIFAEM-VNRRPLFP 201

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|173656 cd05111, PTK_HER3, Pseudokinase domain of the Protein Tyrosine Kinase, HER3

 Score = 86.2 bits (213), Expect = 1e-18
 Identities = 70/221 (31%), Positives = 109/221 (49%), Gaps = 25/221 (11%)

Query: 317 ARRFKYAELASVTKGFGEQNLVGSGGFGRVYRGL-MP---SLGLEVAIKRIGHNS-QQGM 371
           AR  K  EL  +        L+GSG FG V++G+ +P   S+ + VAIK I   S +Q  
Sbjct: 1   ARILKETELRKL-------KLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTF 53

Query: 372 KEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKL--RKLL 429
           +E    +++MG L H  +V+L G C     L LV    P GSL   +      L  ++LL
Sbjct: 54  QEITDHMLAMGSLDHAYIVRLLGIC-PGASLQLVTQLSPLGSLLDHVRQHRDSLDPQRLL 112

Query: 430 TWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IYEHG 488
            W       + IA+ + YL E    R+VHR++   NILL +    ++ DFG+A  +Y   
Sbjct: 113 NW------CVQIAKGMYYLEE---HRMVHRNLAARNILLKSDSIVQIADFGVADLLYPDD 163

Query: 489 ANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEV 529
                +     + ++A E    G+ T  +DV+SYG+ + E+
Sbjct: 164 KKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEM 204

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER3 binds the neuregulin ligands, NRG1 and NRG2. HER3 contains an impaired tyr kinase domain and relies on its heterodimerization partners for activity following ligand binding. The HER2-HER3 heterodimer constitutes a high affinity co-receptor capable of potent mitogenic signaling. HER3 participates in a signaling pathway involved in the proliferation, survival, adhesion, and motility of tumor cells. Length = 279

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score = 85.7 bits (212), Expect = 2e-18
 Identities = 62/200 (31%), Positives = 102/200 (51%), Gaps = 16/200 (8%)

Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +G+G FG V+ G       +VAIK +   S    + F+AE   M +L+H  LV+L+    
Sbjct: 14  LGAGQFGEVWMGYYNG-HTKVAIKSLKQGSMS-PEAFLAEANLMKQLQHPRLVRLYAVVT 71

Query: 398 KQDELLLVYDYVPNGSL-DKLLFDKDHKLR--KLLTWDQRYKILIGIAQSLLYLHEECNQ 454
           ++  + ++ +Y+ NGSL D L   +  KL   KL+    +      IA+ + ++     +
Sbjct: 72  QE-PIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQ------IAEGMAFIER---K 121

Query: 455 RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKAT 514
             +HRD++ +NIL+   L  K+ DFGLA++ E             + + APE    G  T
Sbjct: 122 NYIHRDLRAANILVSETLCCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFT 181

Query: 515 TSTDVYSYGILMLE-VACGR 533
             +DV+S+GIL+ E V  GR
Sbjct: 182 IKSDVWSFGILLTEIVTYGR 201

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

>gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 85.5 bits (211), Expect = 2e-18
 Identities = 67/204 (32%), Positives = 102/204 (50%), Gaps = 21/204 (10%)

Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVA---EIMSMGRLRHRNLVQ 391
           L+G G FG VY       G E+A+K++  +  SQ+  KE  A   EI  +  LRH  +VQ
Sbjct: 9   LLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQ 68

Query: 392 LHGWCRKQDE--LLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLH 449
            +G  R  +E  L +  +Y+P GS+   L     K    LT +   +    I Q + YLH
Sbjct: 69  YYGCLRDPEEKKLSIFVEYMPGGSIKDQL-----KAYGALTENVTRRYTRQILQGVSYLH 123

Query: 450 EECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK----IYEHGANPQTTHIVGTLGYLAP 505
              +  +VHRD+K +NIL D+  N KLGDFG +K    I   G   ++  + GT  +++P
Sbjct: 124 ---SNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQTICMSGTGIKS--VTGTPYWMSP 178

Query: 506 ELTRTGKATTSTDVYSYGILMLEV 529
           E+          DV+S    ++E+
Sbjct: 179 EVISGEGYGRKADVWSVACTVVEM 202

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264

>gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

 Score = 84.9 bits (210), Expect = 2e-18
 Identities = 63/215 (29%), Positives = 105/215 (48%), Gaps = 15/215 (6%)

Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKE----FVAEIMSMGRLRHRNLVQL 392
           +VG G FG V+     +    V IK+I    +Q  K+       E   +  L H N+++ 
Sbjct: 7   VVGRGAFGIVHLCRRKADQKLVIIKQI--PVEQMTKDERLAAQNECQVLKLLSHPNIIEY 64

Query: 393 HGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEEC 452
           +    +   L++V +Y P G+L + +  +      LL  D    IL    Q LL LH   
Sbjct: 65  YENFLEDKALMIVMEYAPGGTLAEYIQKR---CNSLLDEDT---ILHFFVQILLALHHVH 118

Query: 453 NQRVVHRDVKPSNILLDTYLN-AKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTG 511
            + ++HRD+K  NILLD +    K+GDFG++KI    +  +   +VGT  Y++PEL    
Sbjct: 119 TKLILHRDLKTQNILLDKHKMVVKIGDFGISKIL--SSKSKAYTVVGTPCYISPELCEGK 176

Query: 512 KATTSTDVYSYGILMLEVACGRRSIEPQKAAAELL 546
                +D+++ G ++ E+A  +R+ E     A +L
Sbjct: 177 PYNQKSDIWALGCVLYELASLKRAFEAANLPALVL 211

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256

>gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

 Score = 85.5 bits (211), Expect = 3e-18
 Identities = 61/208 (29%), Positives = 104/208 (50%), Gaps = 21/208 (10%)

Query: 338 VGSGGFGRVYRGLMPSLGLE-----VAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQL 392
           +G G FG+V+     +L  E     VA+K +   S    K+F  E   +  L+H ++V+ 
Sbjct: 13  LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 72

Query: 393 HGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKL----------LTWDQRYKILIGIA 442
           +G C + D L++V++Y+ +G L+K L  + H    +          LT  Q   I   IA
Sbjct: 73  YGVCVEGDPLIMVFEYMKHGDLNKFL--RAHGPDAVLMAEGNRPAELTQSQMLHIAQQIA 130

Query: 443 QSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IYEHGANPQTTHIVGTLG 501
             ++YL    +Q  VHRD+   N L+   L  K+GDFG+++ +Y         H +  + 
Sbjct: 131 AGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIR 187

Query: 502 YLAPELTRTGKATTSTDVYSYGILMLEV 529
           ++ PE     K TT +DV+S G+++ E+
Sbjct: 188 WMPPESIMYRKFTTESDVWSLGVVLWEI 215

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 84.5 bits (209), Expect = 3e-18
 Identities = 55/209 (26%), Positives = 101/209 (48%), Gaps = 22/209 (10%)

Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRI----GHNSQQG--MKEFVAEIMSMGRLRHRNLV 390
            +G+G F   Y+      G  +A+K++      +S+Q   ++    EI  M RL H +++
Sbjct: 7   QLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHII 66

Query: 391 QLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHE 450
           ++ G   +     L  +++  GS+  LL         ++           + + L YLHE
Sbjct: 67  RMLGATCEDSHFNLFVEWMAGGSVSHLLSKYGAFKEAVII-----NYTEQLLRGLSYLHE 121

Query: 451 ECNQRVVHRDVKPSNILLD-TYLNAKLGDFGLA-----KIYEHGANPQTTHIVGTLGYLA 504
               +++HRDVK +N+L+D T    ++ DFG A     K    GA      ++GT+ ++A
Sbjct: 122 ---NQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGT--GAGEFQGQLLGTIAFMA 176

Query: 505 PELTRTGKATTSTDVYSYGILMLEVACGR 533
           PE+ R  +   S DV+S G +++E+A  +
Sbjct: 177 PEVLRGEQYGRSCDVWSVGCVIIEMATAK 205

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src

 Score = 84.7 bits (209), Expect = 3e-18
 Identities = 65/209 (31%), Positives = 100/209 (47%), Gaps = 9/209 (4%)

Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +G G FG V+ G        VAIK +   +    + F+ E   M +LRH  LVQL+    
Sbjct: 14  LGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYA-VV 70

Query: 398 KQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVV 457
            ++ + +V +Y+  GSL   L  +  K  +L    Q   +   IA  + Y+ E  N   V
Sbjct: 71  SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRL---PQLVDMAAQIASGMAYV-ERMN--YV 124

Query: 458 HRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTST 517
           HRD++ +NIL+   L  K+ DFGLA++ E             + + APE    G+ T  +
Sbjct: 125 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 184

Query: 518 DVYSYGILMLEVACGRRSIEPQKAAAELL 546
           DV+S+GIL+ E+    R   P     E+L
Sbjct: 185 DVWSFGILLTELTTKGRVPYPGMVNREVL 213

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 85.0 bits (210), Expect = 4e-18
 Identities = 63/196 (32%), Positives = 98/196 (50%), Gaps = 12/196 (6%)

Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVA-EIMSMGRLRHRNLVQLHGWC 396
           +G G  G VY  +  + G EVAIK++ +  QQ  KE +  EI+ M   +H N+V      
Sbjct: 27  IGQGASGTVYTAIDVATGQEVAIKQM-NLQQQPKKELIINEILVMRENKHPNIVNYLDSY 85

Query: 397 RKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRV 456
              DEL +V +Y+  GSL  ++ +        +   Q   +     Q+L +LH   NQ V
Sbjct: 86  LVGDELWVVMEYLAGGSLTDVVTE------TCMDEGQIAAVCRECLQALEFLHS--NQ-V 136

Query: 457 VHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTS 516
           +HRD+K  NILL    + KL DFG         + ++T +VGT  ++APE+         
Sbjct: 137 IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST-MVGTPYWMAPEVVTRKAYGPK 195

Query: 517 TDVYSYGILMLEVACG 532
            D++S GI+ +E+  G
Sbjct: 196 VDIWSLGIMAIEMVEG 211

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 84.9 bits (210), Expect = 6e-18
 Identities = 61/199 (30%), Positives = 91/199 (45%), Gaps = 19/199 (9%)

Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRI---GHNSQQGMKEFVAEIMSMGRLRHRNLVQLHG 394
           +G G FG VY          VAIK++   G  S +  ++ + E+  + +LRH N ++  G
Sbjct: 23  IGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKG 82

Query: 395 WCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQ 454
              ++    LV +Y    + D L        +K L   +   I  G  Q L YLH     
Sbjct: 83  CYLREHTAWLVMEYCLGSASDIL-----EVHKKPLQEVEIAAICHGALQGLAYLHSHER- 136

Query: 455 RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRT---G 511
             +HRD+K  NILL      KL DFG A +     +P  +  VGT  ++APE+      G
Sbjct: 137 --IHRDIKAGNILLTEPGTVKLADFGSASL----VSPANS-FVGTPYWMAPEVILAMDEG 189

Query: 512 KATTSTDVYSYGILMLEVA 530
           +     DV+S GI  +E+A
Sbjct: 190 QYDGKVDVWSLGITCIELA 208

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score = 84.4 bits (209), Expect = 6e-18
 Identities = 68/210 (32%), Positives = 107/210 (50%), Gaps = 32/210 (15%)

Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIG-HNSQQGMKEF-VAEIMSMGRLRHRNLVQLHGW 395
           +G G +G VY+G     G  VA+K+I   + ++G+    + EI  +  L+H N+V L   
Sbjct: 8   IGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDV 67

Query: 396 CRKQDELLLVYDYVPNGSLD-KLLFD---KDHKLRKLLTWDQRYKILIGIAQSLLYLHEE 451
             ++  L L+++++   S+D K   D   K   +   L     Y+IL GI    L+ H  
Sbjct: 68  LMQESRLYLIFEFL---SMDLKKYLDSLPKGQYMDAELVKSYLYQILQGI----LFCHS- 119

Query: 452 CNQRVVHRDVKPSNILLDTYLNAKLGDFGLA-------KIYEHGANPQTTHIVGTLGYLA 504
             +RV+HRD+KP N+L+D     KL DFGLA       ++Y        TH V TL Y A
Sbjct: 120 --RRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVRVY--------THEVVTLWYRA 169

Query: 505 PE-LTRTGKATTSTDVYSYGILMLEVACGR 533
           PE L  + + +T  D++S G +  E+A  +
Sbjct: 170 PEVLLGSPRYSTPVDIWSIGTIFAEMATKK 199

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2

 Score = 84.7 bits (209), Expect = 6e-18
 Identities = 60/215 (27%), Positives = 106/215 (49%), Gaps = 30/215 (13%)

Query: 335 QNLVGSGGFGRVYRGLMPSLGL--EVAIKRIG-HNSQQGMKEFVAEIMSMGRL-RHRNLV 390
           Q+++G G FG+V +  +   GL  + AIKR+  + S+   ++F  E+  + +L  H N++
Sbjct: 12  QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 71

Query: 391 QLHGWCRKQDELLLVYDYVPNGSLDKLL-----------FDKDHKLRKLLTWDQRYKILI 439
            L G C  +  L L  +Y P+G+L   L           F   +     L+  Q      
Sbjct: 72  NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 131

Query: 440 GIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGT 499
            +A+ + YL +   ++ +HRD+   NIL+     AK+ DFGL++        Q  ++  T
Sbjct: 132 DVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSR-------GQEVYVKKT 181

Query: 500 LG-----YLAPELTRTGKATTSTDVYSYGILMLEV 529
           +G     ++A E       TT++DV+SYG+L+ E+
Sbjct: 182 MGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEI 216

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score = 84.1 bits (209), Expect = 7e-18
 Identities = 62/207 (29%), Positives = 94/207 (45%), Gaps = 33/207 (15%)

Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMS----MGRLRHRNLVQLH 393
           +G+G FGRV        G   A+K +       +K+ V  +++    +  +RH  LV L+
Sbjct: 9   LGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQ-VEHVLNEKRILQSIRHPFLVNLY 67

Query: 394 GWCRKQDELLLVYDYVPNGSLDKLL-----FDKDHKLRKLLTWDQRYKILIGIAQSLL-- 446
           G  +    L LV +YVP G L   L     F +                    AQ +L  
Sbjct: 68  GSFQDDSNLYLVMEYVPGGELFSHLRKSGRFPEPV-------------ARFYAAQVVLAL 114

Query: 447 -YLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAP 505
            YLH   +  +V+RD+KP N+LLD+    K+ DFG AK  +      T  + GT  YLAP
Sbjct: 115 EYLH---SLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR----TYTLCGTPEYLAP 167

Query: 506 ELTRTGKATTSTDVYSYGILMLEVACG 532
           E+  +     + D ++ GIL+ E+  G
Sbjct: 168 EIILSKGYGKAVDWWALGILIYEMLAG 194

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 83.7 bits (207), Expect = 7e-18
 Identities = 51/198 (25%), Positives = 102/198 (51%), Gaps = 11/198 (5%)

Query: 335 QNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHG 394
           ++ +G G +G VY G+     L VA+K +  ++ + ++EF+ E   M  ++H NLVQL G
Sbjct: 11  KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLG 69

Query: 395 WCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQ 454
            C ++    ++ +++  G+L   L + +   R+ +       +   I+ ++ YL +   +
Sbjct: 70  VCTREPPFYIITEFMTYGNLLDYLRECN---RQEVNAVVLLYMATQISSAMEYLEK---K 123

Query: 455 RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGT--LGYLAPELTRTGK 512
             +HRD+   N L+      K+ DFGL+++     +  T H      + + APE     K
Sbjct: 124 NFIHRDLAARNCLVGENHLVKVADFGLSRLMT--GDTYTAHAGAKFPIKWTAPESLAYNK 181

Query: 513 ATTSTDVYSYGILMLEVA 530
            +  +DV+++G+L+ E+A
Sbjct: 182 FSIKSDVWAFGVLLWEIA 199

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

 Score = 83.5 bits (206), Expect = 8e-18
 Identities = 62/209 (29%), Positives = 102/209 (48%), Gaps = 9/209 (4%)

Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +G+G FG V+ G       +VA+K +   +    + F+ E   M +LRH  LVQL+    
Sbjct: 14  LGNGQFGEVWMGTWNG-NTKVAVKTLKPGTMSP-ESFLEEAQIMKKLRHDKLVQLYA-VV 70

Query: 398 KQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVV 457
            ++ + +V +Y+  GSL   L D + +  KL        +   +A  + Y+ E  N   +
Sbjct: 71  SEEPIYIVTEYMSKGSLLDFLKDGEGRALKL---PNLVDMAAQVAAGMAYI-ERMN--YI 124

Query: 458 HRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTST 517
           HRD++ +NIL+   L  K+ DFGLA++ E             + + APE    G+ T  +
Sbjct: 125 HRDLRSANILVGDGLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 184

Query: 518 DVYSYGILMLEVACGRRSIEPQKAAAELL 546
           DV+S+GIL+ E+    R   P     E+L
Sbjct: 185 DVWSFGILLTELVTKGRVPYPGMNNREVL 213

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score = 83.1 bits (206), Expect = 1e-17
 Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 30/211 (14%)

Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRI--GHNSQQGMKEFV-AEIMSMGRLRHRNLVQLHG 394
           +  G +GRV+     S G   AIK I      ++   + V  E   + + +   +V+L+ 
Sbjct: 1   ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYY 60

Query: 395 WCRKQDELLLVYDYVPNGSLDKLL-----FDKDHKLRKLLTWDQRYKILIG-IAQSLLYL 448
             + +  L LV +Y+P G L  LL      D+D             +I I  I  +L YL
Sbjct: 61  SFQGKKNLYLVMEYLPGGDLASLLENVGSLDEDVA-----------RIYIAEIVLALEYL 109

Query: 449 HEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-------IYEHGANPQTTHIVGTLG 501
           H   +  ++HRD+KP NIL+D+  + KL DFGL+K       I  +    +   IVGT  
Sbjct: 110 H---SNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPD 166

Query: 502 YLAPELTRTGKATTSTDVYSYGILMLEVACG 532
           Y+APE+      + + D +S G ++ E   G
Sbjct: 167 YIAPEVILGQGHSKTVDWWSLGCILYEFLVG 197

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|133220 cd05089, PTKc_Tie1, Catalytic domain of the Protein Tyrosine Kinase, Tie1

 Score = 83.5 bits (206), Expect = 1e-17
 Identities = 60/215 (27%), Positives = 107/215 (49%), Gaps = 30/215 (13%)

Query: 335 QNLVGSGGFGRVYRGLMPSLGLEV--AIKRIG-HNSQQGMKEFVAEIMSMGRL-RHRNLV 390
           ++++G G FG+V R ++   GL++  AIK +    S+   ++F  E+  + +L  H N++
Sbjct: 7   EDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNII 66

Query: 391 QLHGWCRKQDELLLVYDYVPNGSLDKLL-----------FDKDHKLRKLLTWDQRYKILI 439
            L G C  +  L +  +Y P G+L   L           F K+H     LT  Q  +   
Sbjct: 67  NLLGACENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFAS 126

Query: 440 GIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGT 499
            +A  + YL E   ++ +HRD+   N+L+   L +K+ DFGL++  E        ++  T
Sbjct: 127 DVATGMQYLSE---KQFIHRDLAARNVLVGENLASKIADFGLSRGEE-------VYVKKT 176

Query: 500 LG-----YLAPELTRTGKATTSTDVYSYGILMLEV 529
           +G     ++A E       TT +DV+S+G+L+ E+
Sbjct: 177 MGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEI 211

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. In vivo studies of Tie1 show that it is critical in vascular development. Length = 297

>gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

 Score = 83.1 bits (205), Expect = 2e-17
 Identities = 58/211 (27%), Positives = 104/211 (49%), Gaps = 24/211 (11%)

Query: 338 VGSGGFGRVYRGLMPSLG-----LEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQL 392
           +G G FG+V+     +L      + VA+K +   +    K+F  E   +  L+H ++V+ 
Sbjct: 13  LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 72

Query: 393 HGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWD-------------QRYKILI 439
           +G C   D L++V++Y+ +G L+K L  + H    ++  D             Q   I  
Sbjct: 73  YGVCGDGDPLIMVFEYMKHGDLNKFL--RAHGPDAMILVDGQPRQAKGELGLSQMLHIAS 130

Query: 440 GIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IYEHGANPQTTHIVG 498
            IA  ++YL    +Q  VHRD+   N L+   L  K+GDFG+++ +Y         H + 
Sbjct: 131 QIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTML 187

Query: 499 TLGYLAPELTRTGKATTSTDVYSYGILMLEV 529
            + ++ PE     K TT +DV+S+G+++ E+
Sbjct: 188 PIRWMPPESIMYRKFTTESDVWSFGVILWEI 218

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291

>gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

 Score = 81.7 bits (201), Expect = 3e-17
 Identities = 67/204 (32%), Positives = 101/204 (49%), Gaps = 21/204 (10%)

Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVA---EIMSMGRLRHRNLVQ 391
           L+G G FGRVY       G E+A K++  +  S +  KE  A   EI  +  L+H  +VQ
Sbjct: 9   LLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQ 68

Query: 392 LHGWCRKQDE--LLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLH 449
            +G  R + E  L +  +Y+P GS+   L     K    LT     K    I + + YLH
Sbjct: 69  YYGCLRDRAEKTLTIFMEYMPGGSVKDQL-----KAYGALTESVTRKYTRQILEGMSYLH 123

Query: 450 EECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK----IYEHGANPQTTHIVGTLGYLAP 505
              +  +VHRD+K +NIL D+  N KLGDFG +K    I   G   ++  + GT  +++P
Sbjct: 124 ---SNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICMSGTGIRS--VTGTPYWMSP 178

Query: 506 ELTRTGKATTSTDVYSYGILMLEV 529
           E+          DV+S G  ++E+
Sbjct: 179 EVISGEGYGRKADVWSLGCTVVEM 202

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266

>gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

 Score = 82.0 bits (203), Expect = 3e-17
 Identities = 68/213 (31%), Positives = 101/213 (47%), Gaps = 32/213 (15%)

Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS-QQGMKEFVAEIMSMGRLRH-RNLVQLHG 394
            +G G FG V + L    G  +A+KRI     ++  K  + ++  + R      +V+ +G
Sbjct: 11  EIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYG 70

Query: 395 --------W-CRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSL 445
                   W C    EL+ +       SLDK        L+ ++  +   KI +   ++L
Sbjct: 71  ALFREGDCWICM---ELMDI-------SLDKFYKYVYEVLKSVIPEEILGKIAVATVKAL 120

Query: 446 LYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLA-KIYEHGANPQTTHIVGTLGYLA 504
            YL EE    ++HRDVKPSNILLD   N KL DFG++ ++ +  A    T   G   Y+A
Sbjct: 121 NYLKEELK--IIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSIAK---TRDAGCRPYMA 175

Query: 505 PEL----TRTGKATTSTDVYSYGILMLEVACGR 533
           PE      R G    S DV+S GI + EVA G+
Sbjct: 176 PERIDPSARDGYDVRS-DVWSLGITLYEVATGK 207

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 81.5 bits (201), Expect = 4e-17
 Identities = 63/216 (29%), Positives = 108/216 (50%), Gaps = 24/216 (11%)

Query: 329 TKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIG-HNSQQGMKE-----FVAEIMSMG 382
           TKG     ++G G +G VY GL  + G  +A+K++    S     E        E+  + 
Sbjct: 3   TKG----EVLGKGAYGTVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLK 57

Query: 383 RLRHRNLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIA 442
            L+H N+VQ  G C   + + +  ++VP GS+  +L ++   L + +      +IL G+A
Sbjct: 58  SLKHVNIVQYLGTCLDDNTISIFMEFVPGGSISSIL-NRFGPLPEPVFCKYTKQILDGVA 116

Query: 443 QSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLA-KIYEHGANPQTTHIV---- 497
               YLH  C   VVHRD+K +N++L      KL DFG A ++   G +   ++++    
Sbjct: 117 ----YLHNNC---VVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHGTHSNMLKSMH 169

Query: 498 GTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGR 533
           GT  ++APE+         +D++S G  + E+A G+
Sbjct: 170 GTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGK 205

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

 Score = 82.0 bits (202), Expect = 4e-17
 Identities = 61/203 (30%), Positives = 100/203 (49%), Gaps = 20/203 (9%)

Query: 338 VGSGGFGRVYRGL-MPSLGLEVAIKRIG-HNSQQGMK----EFVAEIMSMGRLRHRNLVQ 391
           +G G +G+V++   + + G  VA+KR+     ++GM       VA +  +    H N+V+
Sbjct: 9   IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 68

Query: 392 LHGWCR-----KQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLL 446
           L   C      ++ +L LV+++V       L    +  +      D  +++L    + L 
Sbjct: 69  LFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLL----RGLD 124

Query: 447 YLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPE 506
           +LH   + RVVHRD+KP NIL+ +    KL DFGLA+IY        T +V TL Y APE
Sbjct: 125 FLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQM--ALTSVVVTLWYRAPE 179

Query: 507 LTRTGKATTSTDVYSYGILMLEV 529
           +       T  D++S G +  E+
Sbjct: 180 VLLQSSYATPVDLWSVGCIFAEM 202

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290

>gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

 Score = 81.2 bits (200), Expect = 5e-17
 Identities = 52/202 (25%), Positives = 101/202 (50%), Gaps = 8/202 (3%)

Query: 332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRI---GHNSQQGMKEFVAEIMSMGRLRHRN 388
           F  +  +G G F  VYR      G+ VA+K++        +   + + EI  + +L H N
Sbjct: 4   FRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPN 63

Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYL 448
           +++ +    + +EL +V +    G L +++     K ++L+     +K  + +  +L ++
Sbjct: 64  VIKYYASFIEDNELNIVLELADAGDLSRMI-KHFKKQKRLIPEKTVWKYFVQLCSALEHM 122

Query: 449 HEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELT 508
           H   ++RV+HRD+KP+N+ +      KLGD GL + +        + +VGT  Y++PE  
Sbjct: 123 H---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHS-LVGTPYYMSPERI 178

Query: 509 RTGKATTSTDVYSYGILMLEVA 530
                   +D++S G L+ E+A
Sbjct: 179 HENGYNFKSDIWSLGCLLYEMA 200

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|88330 cd05047, PTKc_Tie, Catalytic domain of Tie Protein Tyrosine Kinases

 Score = 81.3 bits (200), Expect = 6e-17
 Identities = 59/214 (27%), Positives = 105/214 (49%), Gaps = 30/214 (14%)

Query: 336 NLVGSGGFGRVYRGLMPSLGLEV--AIKRIG-HNSQQGMKEFVAEIMSMGRL-RHRNLVQ 391
           +++G G FG+V +  +   GL +  AIKR+  + S+   ++F  E+  + +L  H N++ 
Sbjct: 1   DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 60

Query: 392 LHGWCRKQDELLLVYDYVPNGSLDKLL-----------FDKDHKLRKLLTWDQRYKILIG 440
           L G C  +  L L  +Y P+G+L   L           F   +     L+  Q       
Sbjct: 61  LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 120

Query: 441 IAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTL 500
           +A+ + YL +   ++ +HRD+   NIL+     AK+ DFGL++  E        ++  T+
Sbjct: 121 VARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSRGQE-------VYVKKTM 170

Query: 501 G-----YLAPELTRTGKATTSTDVYSYGILMLEV 529
           G     ++A E       TT++DV+SYG+L+ E+
Sbjct: 171 GRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEI 204

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific ligand has been identified for Tie1. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. In vivo studies of Tie1 show that it is critical in vascular development. Length = 270

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score = 81.4 bits (201), Expect = 6e-17
 Identities = 65/205 (31%), Positives = 109/205 (53%), Gaps = 14/205 (6%)

Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQ-QGMKEF-VAEIMSMGRLRHRNLVQLHGW 395
           +G G +G VY+      G  VA+K+I  +++ +G+    + EI  +  L H N+V+L   
Sbjct: 8   IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 67

Query: 396 CRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQR 455
              +++L LV++++ +  L K +   D      +        L  + Q L + H   + R
Sbjct: 68  IHTENKLYLVFEFL-HQDLKKFM---DASPLSGIPLPLIKSYLFQLLQGLAFCH---SHR 120

Query: 456 VVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQT-THIVGTLGYLAPELTRTGK-A 513
           V+HRD+KP N+L++T    KL DFGLA+ +  G   +T TH V TL Y APE+    K  
Sbjct: 121 VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLGCKYY 178

Query: 514 TTSTDVYSYGILMLEVACGRRSIEP 538
           +T+ D++S G +  E+   RR++ P
Sbjct: 179 STAVDIWSLGCIFAEMVT-RRALFP 202

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|133195 cd05064, PTKc_EphR_A10, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

 Score = 80.4 bits (198), Expect = 1e-16
 Identities = 61/212 (28%), Positives = 108/212 (50%), Gaps = 26/212 (12%)

Query: 335 QNLVGSGGFGRVYRGLM--PS-LGLEVAIK--RIGHNSQQGMKEFVAEIMSMGRLRHRNL 389
           + ++G+G FG + RG +  PS   L VAI   R G + +Q  + F+AE +++G+  H N+
Sbjct: 10  ERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQ-RRGFLAEALTLGQFDHSNI 68

Query: 390 VQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLH 449
           V+L G   + + +++V +Y+ NG+LD  L     K    L   Q   +L G+A  + YL 
Sbjct: 69  VRLEGVITRGNTMMIVTEYMSNGALDSFL----RKHEGQLVAGQLMGMLPGLASGMKYLS 124

Query: 450 EECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLG------YL 503
           E      VH+ +    +L+++ L  K+  F            ++  I  T+       + 
Sbjct: 125 E---MGYVHKGLAAHKVLVNSDLVCKISGFR------RLQEDKSEAIYTTMSGKSPVLWA 175

Query: 504 APELTRTGKATTSTDVYSYGILMLEV-ACGRR 534
           APE  +    ++++DV+S+GI+M EV + G R
Sbjct: 176 APEAIQYHHFSSASDVWSFGIVMWEVMSYGER 207

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). EphA10, which contains an inactive tyr kinase domain, may function to attenuate signals of co-clustered active receptors. EphA10 is mainly expressed in the testis. Ephrin/EphR interaction results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

 Score = 80.5 bits (198), Expect = 1e-16
 Identities = 65/204 (31%), Positives = 101/204 (49%), Gaps = 21/204 (10%)

Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVA---EIMSMGRLRHRNLVQ 391
           L+G G FGRVY       G E+A+K++  +  S +  KE  A   EI  +  L H  +VQ
Sbjct: 9   LLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQ 68

Query: 392 LHGWCRKQDE--LLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLH 449
            +G  R   E  L +  +++P GS+   L     K    LT +   K    I + + YLH
Sbjct: 69  YYGCLRDPMERTLSIFMEHMPGGSIKDQL-----KSYGALTENVTRKYTRQILEGVSYLH 123

Query: 450 EECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK----IYEHGANPQTTHIVGTLGYLAP 505
              +  +VHRD+K +NIL D+  N KLGDFG +K    I   G   ++  + GT  +++P
Sbjct: 124 ---SNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQTICLSGTGMKS--VTGTPYWMSP 178

Query: 506 ELTRTGKATTSTDVYSYGILMLEV 529
           E+          D++S G  ++E+
Sbjct: 179 EVISGEGYGRKADIWSVGCTVVEM 202

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265

>gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

 Score = 80.7 bits (200), Expect = 1e-16
 Identities = 60/211 (28%), Positives = 99/211 (46%), Gaps = 40/211 (18%)

Query: 336 NLVGSGGFGRVYRGLMPSLGLEVAIKRIG-HNSQQGMKEF----VAEIMSMGRLRHRNLV 390
           N +  G +G VYR      G  VA+K++     ++G   F    + EI  + +L+H N+V
Sbjct: 11  NRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEG---FPITSLREINILLKLQHPNIV 67

Query: 391 QLH----GWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLL 446
            +     G     D++ +V +YV            +H L+ L+    +   L    + L+
Sbjct: 68  TVKEVVVG--SNLDKIYMVMEYV------------EHDLKSLME-TMKQPFLQSEVKCLM 112

Query: 447 --------YLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVG 498
                   +LH+     ++HRD+K SN+LL+     K+ DFGLA+ Y     P  T +V 
Sbjct: 113 LQLLSGVAHLHD---NWILHRDLKTSNLLLNNRGILKICDFGLAREYGSPLKP-YTQLVV 168

Query: 499 TLGYLAPE-LTRTGKATTSTDVYSYGILMLE 528
           TL Y APE L    + +T+ D++S G +  E
Sbjct: 169 TLWYRAPELLLGAKEYSTAIDMWSVGCIFAE 199

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293

>gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn

 Score = 80.1 bits (197), Expect = 1e-16
 Identities = 57/195 (29%), Positives = 102/195 (52%), Gaps = 14/195 (7%)

Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +G+G FG V+ G   +   +VA+K +   +   ++ F+ E   M  L+H  LV+L+    
Sbjct: 14  LGAGQFGEVWMGYYNN-STKVAVKTLKPGTMS-VQAFLEEANLMKTLQHDKLVRLYAVVT 71

Query: 398 KQDELLLVYDYVPNGSL-DKLLFDKDHK--LRKLLTWDQRYKILIGIAQSLLYLHEECNQ 454
           K++ + ++ +Y+  GSL D L  D+  K  L KL+ +  +      IA+ + Y+     +
Sbjct: 72  KEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQ------IAEGMAYIER---K 122

Query: 455 RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKAT 514
             +HRD++ +N+L+   L  K+ DFGLA++ E             + + APE    G  T
Sbjct: 123 NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFT 182

Query: 515 TSTDVYSYGILMLEV 529
             +DV+S+GIL+ E+
Sbjct: 183 IKSDVWSFGILLYEI 197

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 80.8 bits (199), Expect = 1e-16
 Identities = 60/210 (28%), Positives = 106/210 (50%), Gaps = 25/210 (11%)

Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +G G FG+VY+      G   A K I   S++ +++++ EI  +    H  +V+L G   
Sbjct: 20  LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFY 79

Query: 398 KQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVV 457
              +L ++ ++ P G++D ++ + D  L +     Q   I   + ++L YLH   + +++
Sbjct: 80  WDGKLWIMIEFCPGGAVDAIMLELDRGLTE----PQIQVICRQMLEALQYLH---SMKII 132

Query: 458 HRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTH----IVGTLGYLAPE--LTRTG 511
           HRD+K  N+LL    + KL DFG++       N +T       +GT  ++APE  +  T 
Sbjct: 133 HRDLKAGNVLLTLDGDIKLADFGVS-----AKNVKTLQRRDSFIGTPYWMAPEVVMCETM 187

Query: 512 KATT---STDVYSYGILMLEVACGRRSIEP 538
           K T      D++S GI ++E+A     IEP
Sbjct: 188 KDTPYDYKADIWSLGITLIEMA----QIEP 213

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score = 80.8 bits (200), Expect = 1e-16
 Identities = 63/222 (28%), Positives = 98/222 (44%), Gaps = 41/222 (18%)

Query: 339 GSGGFGRVYRGLMPSLGLEVAIKRI-GHNSQQGMK-EFVAEIMSMGRLRHRNLVQLHGWC 396
           G G FG VY+      G  VA+K+I  HN + G     + EI  + +L+H N+V L    
Sbjct: 17  GEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPL---- 72

Query: 397 RKQDELLLVYDYVPN-----GSLDKLLFDKDHKLRKLLTWDQRYK--------ILIGIAQ 443
                + +  +         GS+  +    DH L  LL  +   K         ++ + +
Sbjct: 73  -----IDMAVERPDKSKRKRGSVYMVTPYMDHDLSGLLE-NPSVKLTESQIKCYMLQLLE 126

Query: 444 SLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQT---------- 493
            + YLHE     ++HRD+K +NIL+D     K+ DFGLA+ Y  G  P            
Sbjct: 127 GINYLHE---NHILHRDIKAANILIDNQGILKIADFGLARPY-DGPPPNPKGGGGGGTRK 182

Query: 494 -THIVGTLGYLAPELTRTGKA-TTSTDVYSYGILMLEVACGR 533
            T++V T  Y  PEL    +  TT+ D++  G +  E+   R
Sbjct: 183 YTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRR 224

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

 Score = 80.2 bits (198), Expect = 1e-16
 Identities = 58/207 (28%), Positives = 95/207 (45%), Gaps = 15/207 (7%)

Query: 334 EQNLVGSGGFGRVYRGLMPSLGLE-----VAIKRIGH-NSQQGMKEFVAEIMSMGRLRHR 387
           E   +G G FG V+      +  E     V +K +     +    EF  E+    +L H+
Sbjct: 9   EITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHK 68

Query: 388 NLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKL----LTWDQRYKILIGIAQ 443
           N+V+L G CR+ +   ++ +Y   G L + L     K  KL    L+  Q+  +   IA 
Sbjct: 69  NVVRLLGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIAL 128

Query: 444 SLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IYEHGANPQTTHIVGTLGY 502
            + +L    N R VHRD+   N L+ +    K+    L+K +Y          ++  L +
Sbjct: 129 GMDHLS---NARFVHRDLAARNCLVSSQREVKVSLLSLSKDVYNSEYYKLRNALI-PLRW 184

Query: 503 LAPELTRTGKATTSTDVYSYGILMLEV 529
           LAPE  +    +T +DV+S+G+LM EV
Sbjct: 185 LAPEAVQEDDFSTKSDVWSFGVLMWEV 211

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 80.5 bits (198), Expect = 2e-16
 Identities = 62/204 (30%), Positives = 99/204 (48%), Gaps = 12/204 (5%)

Query: 330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNL 389
           K +     +G G  G V+  +  + G EVAIK+I    Q   +  + EI+ M  L++ N+
Sbjct: 19  KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNI 78

Query: 390 VQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLH 449
           V         DEL +V +Y+  GSL  ++ +        +   Q   +     Q+L +LH
Sbjct: 79  VNFLDSFLVGDELFVVMEYLAGGSLTDVVTE------TCMDEAQIAAVCRECLQALEFLH 132

Query: 450 EECNQRVVHRDVKPSNILLDTYLNAKLGDFGL-AKIYEHGANPQTTHIVGTLGYLAPELT 508
              NQ V+HRD+K  N+LL    + KL DFG  A+I    +   T  +VGT  ++APE+ 
Sbjct: 133 --ANQ-VIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSKRST--MVGTPYWMAPEVV 187

Query: 509 RTGKATTSTDVYSYGILMLEVACG 532
                    D++S GI+ +E+  G
Sbjct: 188 TRKAYGPKVDIWSLGIMAIEMVEG 211

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 80.0 bits (198), Expect = 2e-16
 Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 30/214 (14%)

Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRL-RHRNLVQLHGW 395
           ++G G +G+VY+      G  VAIK I    +   +E   E   + +   H N+   +G 
Sbjct: 13  VIGEGTYGKVYKARHKKTGQLVAIK-IMDIIEDEEEEIKEEYNILRKYSNHPNIATFYGA 71

Query: 396 CRK------QDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYK------ILIGIAQ 443
             K       D+L LV +    GS+  L+       + L    +R K      IL    +
Sbjct: 72  FIKKNPPGNDDQLWLVMELCGGGSVTDLV-------KGLRKKGKRLKEEWIAYILRETLR 124

Query: 444 SLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYL 503
            L YLHE    +V+HRD+K  NILL      KL DFG++   +     + T I GT  ++
Sbjct: 125 GLAYLHE---NKVIHRDIKGQNILLTKNAEVKLVDFGVSAQLDSTLGRRNTFI-GTPYWM 180

Query: 504 APELTRTGKATTST-----DVYSYGILMLEVACG 532
           APE+    +   ++     DV+S GI  +E+A G
Sbjct: 181 APEVIACDEQPDASYDARSDVWSLGITAIELADG 214

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer

 Score = 79.3 bits (195), Expect = 2e-16
 Identities = 54/193 (27%), Positives = 96/193 (49%), Gaps = 9/193 (4%)

Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMK-EFVAEIMSMGRLRHRNLVQLHGW 395
           L+G G FG V++G +      VA+K    +  Q +K +F++E   + +  H N+V+L G 
Sbjct: 2   LLGKGNFGEVFKGTLKD-KTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGV 60

Query: 396 CRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQR 455
           C ++  + +V + VP G     L  K  +L+      Q  K  +  A  + YL    ++ 
Sbjct: 61  CTQRQPIYIVMELVPGGDFLSFLRKKKDELKT----KQLVKFALDAAAGMAYLE---SKN 113

Query: 456 VVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATT 515
            +HRD+   N L+      K+ DFG+++  + G    +      + + APE    G+ ++
Sbjct: 114 CIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQIPIKWTAPEALNYGRYSS 173

Query: 516 STDVYSYGILMLE 528
            +DV+SYGIL+ E
Sbjct: 174 ESDVWSYGILLWE 186

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250

>gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4

 Score = 80.1 bits (197), Expect = 2e-16
 Identities = 68/206 (33%), Positives = 111/206 (53%), Gaps = 28/206 (13%)

Query: 337 LVGSGGFGRVYRGL-MP---SLGLEVAIKRIGHNSQQGMK---EFVAEIMSMGRLRHRNL 389
           ++GSG FG VY+G+ +P   ++ + VAIK +  N   G K   EF+ E + M  + H +L
Sbjct: 14  VLGSGAFGTVYKGIWVPEGETVKIPVAIKIL--NETTGPKANVEFMDEALIMASMDHPHL 71

Query: 390 VQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHK----LRKLLTWDQRYKILIGIAQSL 445
           V+L G C     + LV   +P+G L  L +  +HK     + LL W       + IA+ +
Sbjct: 72  VRLLGVCLSP-TIQLVTQLMPHGCL--LDYVHEHKDNIGSQLLLNW------CVQIAKGM 122

Query: 446 LYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTL--GYL 503
           +YL E   +R+VHRD+   N+L+ +  + K+ DFGLA++ E G   +     G +   ++
Sbjct: 123 MYLEE---RRLVHRDLAARNVLVKSPNHVKITDFGLARLLE-GDEKEYNADGGKMPIKWM 178

Query: 504 APELTRTGKATTSTDVYSYGILMLEV 529
           A E     K T  +DV+SYG+ + E+
Sbjct: 179 ALECIHYRKFTHQSDVWSYGVTIWEL 204

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303

>gnl|CDD|133246 cd05115, PTKc_Zap-70, Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

 Score = 79.2 bits (195), Expect = 2e-16
 Identities = 58/196 (29%), Positives = 100/196 (51%), Gaps = 13/196 (6%)

Query: 338 VGSGGFGRVYRGL--MPSLGLEVAIKRIGHNSQQGMK-EFVAEIMSMGRLRHRNLVQLHG 394
           +GSG FG V +G+  M    ++VAIK + + +++ ++ E + E   M +L +  +V++ G
Sbjct: 3   LGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIG 62

Query: 395 WCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQ 454
            C + + L+LV +    G L+K L  K    +  +T     +++  ++  + YL     +
Sbjct: 63  VC-EAEALMLVMEMASGGPLNKFLSGK----KDEITVSNVVELMHQVSMGMKYLEG---K 114

Query: 455 RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGT--LGYLAPELTRTGK 512
             VHRD+   N+LL     AK+ DFGL+K      +       G   L + APE     K
Sbjct: 115 NFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSAGKWPLKWYAPECINFRK 174

Query: 513 ATTSTDVYSYGILMLE 528
            ++ +DV+SYGI M E
Sbjct: 175 FSSRSDVWSYGITMWE 190

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its phosphorylation and activation. It then phosphorylates target proteins, which propagate the signals to downstream pathways. Zap-70 is hardly detected in normal peripheral B-cells, but is present in some B-cell malignancies. It is used as a diagnostic marker for chronic lymphocytic leukemia (CLL) as it is associated with the more aggressive subtype of the disease. Length = 257

>gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

 Score = 79.8 bits (197), Expect = 2e-16
 Identities = 59/219 (26%), Positives = 98/219 (44%), Gaps = 35/219 (15%)

Query: 332 FGEQNLV-----GSGGFGRVYRGLMPSLG-----LEVAIKRIGHNSQQGMKE-FVAEIMS 380
           F   NL      G+G FG+V       L      ++VA+K +   +    +E  ++E+  
Sbjct: 32  FPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKI 91

Query: 381 MGRL-RHRNLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILI 439
           M  L  H N+V L G C     +L++ +Y   G L   L  K      L   D     L+
Sbjct: 92  MSHLGNHENIVNLLGACTIGGPILVITEYCCYGDLLNFLRRKRESF--LTLED-----LL 144

Query: 440 G----IAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTH 495
                +A+ + +L    ++  +HRD+   N+LL      K+ DFGLA+   + +N    +
Sbjct: 145 SFSYQVAKGMAFL---ASKNCIHRDLAARNVLLTHGKIVKICDFGLARDIMNDSN----Y 197

Query: 496 IVG-----TLGYLAPELTRTGKATTSTDVYSYGILMLEV 529
           +V       + ++APE       T  +DV+SYGIL+ E+
Sbjct: 198 VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEI 236

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score = 79.7 bits (196), Expect = 3e-16
 Identities = 57/196 (29%), Positives = 101/196 (51%), Gaps = 12/196 (6%)

Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +G G  G V        G +VA+K +    QQ  +    E++ M   +H+N+V+++    
Sbjct: 29  IGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYL 88

Query: 398 KQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVV 457
             +EL ++ +++  G+L  ++     + R  L  +Q   +   + Q+L YLH   +Q V+
Sbjct: 89  VGEELWVLMEFLQGGALTDIV----SQTR--LNEEQIATVCESVLQALCYLH---SQGVI 139

Query: 458 HRDVKPSNILLDTYLNAKLGDFGL-AKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTS 516
           HRD+K  +ILL      KL DFG  A+I +    P+   +VGT  ++APE+       T 
Sbjct: 140 HRDIKSDSILLTLDGRVKLSDFGFCAQISKD--VPKRKSLVGTPYWMAPEVISRTPYGTE 197

Query: 517 TDVYSYGILMLEVACG 532
            D++S GI+++E+  G
Sbjct: 198 VDIWSLGIMVIEMVDG 213

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

 Score = 78.7 bits (194), Expect = 3e-16
 Identities = 61/201 (30%), Positives = 100/201 (49%), Gaps = 27/201 (13%)

Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKE--FVAEIMSMGRLRHRNLVQLHGW 395
           +GSG FG V+ G   +  ++VAIK I   ++  M E  F+ E   M +L H  LVQL+G 
Sbjct: 12  LGSGQFGVVHLGKWRA-QIKVAIKAI---NEGAMSEEDFIEEAKVMMKLSHPKLVQLYGV 67

Query: 396 CRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLL----YLHEE 451
           C +Q  L +V +++ NG L   L  +  KL K         +L+ + Q +     YL   
Sbjct: 68  CTQQKPLYIVTEFMENGCLLNYLRQRQGKLSK--------DMLLSMCQDVCEGMEYLER- 118

Query: 452 CNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGT---LGYLAPELT 508
                +HRD+   N L+ +    K+ DFG+ +   +  + + T   G    + +  PE+ 
Sbjct: 119 --NSFIHRDLAARNCLVSSTGVVKVSDFGMTR---YVLDDEYTSSSGAKFPVKWSPPEVF 173

Query: 509 RTGKATTSTDVYSYGILMLEV 529
              K ++ +DV+S+G+LM EV
Sbjct: 174 NFSKYSSKSDVWSFGVLMWEV 194

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256

>gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

 Score = 79.0 bits (195), Expect = 3e-16
 Identities = 60/217 (27%), Positives = 103/217 (47%), Gaps = 22/217 (10%)

Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIG-HNSQQGMKEF-VAEIMSMGRLRHRNLVQLHGW 395
           +G G +G V++         VA+KR+   +  +G+    + EI  +  L+H+N+V+L+  
Sbjct: 8   IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDV 67

Query: 396 CRKQDELLLVYDYVPNG---SLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEEC 452
                +L LV++Y         D    D D ++ K       +++L G+A    + H   
Sbjct: 68  LHSDKKLTLVFEYCDQDLKKYFDSCNGDIDPEIVKSFM----FQLLKGLA----FCHS-- 117

Query: 453 NQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANP--QTTHIVGTLGYLAPELTRT 510
              V+HRD+KP N+L++     KL DFGLA+ +     P    +  V TL Y  P++   
Sbjct: 118 -HNVLHRDLKPQNLLINKNGELKLADFGLARAF---GIPVRCYSAEVVTLWYRPPDVLFG 173

Query: 511 GKA-TTSTDVYSYGILMLEVACGRRSIEPQKAAAELL 546
            K  +TS D++S G +  E+A   R + P     + L
Sbjct: 174 AKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQL 210

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284

>gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

 Score = 78.9 bits (194), Expect = 4e-16
 Identities = 60/210 (28%), Positives = 105/210 (50%), Gaps = 25/210 (11%)

Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +G G FG+VY+      G+  A K I   S++ +++++ EI  +    H N+V+L     
Sbjct: 13  LGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 72

Query: 398 KQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVV 457
            ++ L ++ ++   G++D ++ +    L + LT  Q   +     ++L YLHE    +++
Sbjct: 73  YENNLWILIEFCAGGAVDAVMLE----LERPLTEPQIRVVCKQTLEALNYLHE---NKII 125

Query: 458 HRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTH----IVGTLGYLAPE--LTRTG 511
           HRD+K  NIL     + KL DFG++       N +T       +GT  ++APE  +  T 
Sbjct: 126 HRDLKAGNILFTLDGDIKLADFGVS-----AKNTRTIQRRDSFIGTPYWMAPEVVMCETS 180

Query: 512 KATT---STDVYSYGILMLEVACGRRSIEP 538
           K        DV+S GI ++E+A     IEP
Sbjct: 181 KDRPYDYKADVWSLGITLIEMA----QIEP 206

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 79.0 bits (195), Expect = 4e-16
 Identities = 56/196 (28%), Positives = 100/196 (51%), Gaps = 12/196 (6%)

Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +G G  G V      S G +VA+K++    QQ  +    E++ M   +H N+V+++    
Sbjct: 27  IGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYL 86

Query: 398 KQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVV 457
             DEL +V +++  G+L       D      +  +Q   + + + ++L +LH    Q V+
Sbjct: 87  VGDELWVVMEFLEGGAL------TDIVTHTRMNEEQIATVCLAVLKALSFLH---AQGVI 137

Query: 458 HRDVKPSNILLDTYLNAKLGDFGL-AKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTS 516
           HRD+K  +ILL +    KL DFG  A++ +    P+   +VGT  ++APE+       T 
Sbjct: 138 HRDIKSDSILLTSDGRVKLSDFGFCAQVSKE--VPRRKSLVGTPYWMAPEVISRLPYGTE 195

Query: 517 TDVYSYGILMLEVACG 532
            D++S GI+++E+  G
Sbjct: 196 VDIWSLGIMVIEMVDG 211

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

 Score = 78.9 bits (194), Expect = 4e-16
 Identities = 57/208 (27%), Positives = 104/208 (50%), Gaps = 19/208 (9%)

Query: 338 VGSGGFGRVY----RGLMP-SLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQL 392
           +G G FG+V+      L+P    + VA+K +   S+   ++F  E   +  L+H+++V+ 
Sbjct: 13  LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRF 72

Query: 393 HGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKL----------LTWDQRYKILIGIA 442
           +G C +   LL+V++Y+ +G L++ L       + L          LT  Q   I   IA
Sbjct: 73  YGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIA 132

Query: 443 QSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IYEHGANPQTTHIVGTLG 501
             ++YL    +   VHRD+   N L+   L  K+GDFG+++ IY           +  + 
Sbjct: 133 SGMVYL---ASLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 189

Query: 502 YLAPELTRTGKATTSTDVYSYGILMLEV 529
           ++ PE     K TT +D++S+G+++ E+
Sbjct: 190 WMPPESILYRKFTTESDIWSFGVVLWEI 217

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280

>gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

 Score = 79.0 bits (195), Expect = 4e-16
 Identities = 63/202 (31%), Positives = 100/202 (49%), Gaps = 20/202 (9%)

Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVA--EIMSMGRLRHRNLVQLHGW 395
           +G G +G V++      G  VAIK+   +    + + +A  EI  + +L+H NLV L   
Sbjct: 9   IGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEV 68

Query: 396 CRKQDELLLVYDYVPNGSLDKLLFDKD-HKLRKLLTWDQRYKILIGIAQSLLYLHEECNQ 454
            R++ +L LV++Y  +  L++L  +K+   + + L      KI+    Q++ + H+    
Sbjct: 69  FRRKRKLHLVFEYCDHTVLNEL--EKNPRGVPEHLI----KKIIWQTLQAVNFCHK---H 119

Query: 455 RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL----TRT 510
             +HRDVKP NIL+      KL DFG A+I   G     T  V T  Y APEL    T+ 
Sbjct: 120 NCIHRDVKPENILITKQGQIKLCDFGFARILT-GPGDDYTDYVATRWYRAPELLVGDTQY 178

Query: 511 GKATTSTDVYSYGILMLEVACG 532
           G      DV++ G +  E+  G
Sbjct: 179 G---PPVDVWAIGCVFAELLTG 197

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286

>gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

 Score = 79.3 bits (195), Expect = 5e-16
 Identities = 67/207 (32%), Positives = 95/207 (45%), Gaps = 19/207 (9%)

Query: 330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRI---GHNSQQGMKEFVAEIMSMGRLRH 386
           K F +   +G G FG VY          VAIK++   G  S +  ++ + E+  + +LRH
Sbjct: 15  KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRH 74

Query: 387 RNLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLL 446
            N +Q  G   ++    LV +Y    + D L   K     K L   +   +  G  Q L 
Sbjct: 75  PNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHK-----KPLQEVEIAAVTHGALQGLA 129

Query: 447 YLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPE 506
           YLH   +  ++HRDVK  NILL      KLGDFG A I      P     VGT  ++APE
Sbjct: 130 YLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASI----MAPANX-FVGTPYWMAPE 181

Query: 507 LTRT---GKATTSTDVYSYGILMLEVA 530
           +      G+     DV+S GI  +E+A
Sbjct: 182 VILAMDEGQYDGKVDVWSLGITCIELA 208

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308

>gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

 Score = 78.6 bits (194), Expect = 5e-16
 Identities = 65/212 (30%), Positives = 102/212 (48%), Gaps = 34/212 (16%)

Query: 339 GSGGFGRVYRGLMPSLGLEVAIKRIGH--NSQQGMKEFVAEI-MSMGRLRHRNLVQLHGW 395
           G G +G V +      G  +A+KRI    NSQ+  K  + ++ +SM  +     V  +G 
Sbjct: 10  GRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQE-QKRLLMDLDISMRSVDCPYTVTFYGA 68

Query: 396 CRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQR 455
             ++ ++ +  + V + SLDK  + K +     +  D   KI + I ++L YLH + +  
Sbjct: 69  LFREGDVWICME-VMDTSLDKF-YKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLS-- 124

Query: 456 VVHRDVKPSNILLDTYLNAKLGDFG--------LAKIYEHGANPQTTHIVGTLGYLAPEL 507
           V+HRDVKPSN+L++     KL DFG        +AK  + G  P          Y+APE 
Sbjct: 125 VIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSVAKTIDAGCKP----------YMAPE- 173

Query: 508 TRTGKATTS------TDVYSYGILMLEVACGR 533
            R             +DV+S GI M+E+A GR
Sbjct: 174 -RINPELNQKGYDVKSDVWSLGITMIELATGR 204

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283

>gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes

 Score = 77.8 bits (191), Expect = 6e-16
 Identities = 64/209 (30%), Positives = 101/209 (48%), Gaps = 9/209 (4%)

Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +G G FG V+ G       +VAIK +   +    + F+ E   M +LRH  LV L+    
Sbjct: 14  LGQGCFGEVWMGTWNGT-TKVAIKTLKPGTMMP-EAFLQEAQIMKKLRHDKLVPLYA-VV 70

Query: 398 KQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVV 457
            ++ + +V +++  GSL   L + D K  KL    Q   +   IA  + Y+ E  N   +
Sbjct: 71  SEEPIYIVTEFMGKGSLLDFLKEGDGKYLKL---PQLVDMAAQIADGMAYI-ERMN--YI 124

Query: 458 HRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTST 517
           HRD++ +NIL+   L  K+ DFGLA++ E             + + APE    G+ T  +
Sbjct: 125 HRDLRAANILVGDNLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 184

Query: 518 DVYSYGILMLEVACGRRSIEPQKAAAELL 546
           DV+S+GIL+ E+    R   P     E+L
Sbjct: 185 DVWSFGILLTELVTKGRVPYPGMVNREVL 213

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score = 78.2 bits (192), Expect = 8e-16
 Identities = 56/196 (28%), Positives = 99/196 (50%), Gaps = 12/196 (6%)

Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +G G  G V        G +VA+K++    QQ  +    E++ M    H N+V ++    
Sbjct: 30  IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYL 89

Query: 398 KQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVV 457
             DEL +V +++  G+L  ++          +  +Q   + + + ++L YLH   NQ V+
Sbjct: 90  VGDELWVVMEFLEGGALTDIV------THTRMNEEQIATVCLSVLRALSYLH---NQGVI 140

Query: 458 HRDVKPSNILLDTYLNAKLGDFGL-AKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTS 516
           HRD+K  +ILL +    KL DFG  A++ +    P+   +VGT  ++APE+       T 
Sbjct: 141 HRDIKSDSILLTSDGRIKLSDFGFCAQVSKE--VPKRKSLVGTPYWMAPEVISRLPYGTE 198

Query: 517 TDVYSYGILMLEVACG 532
            D++S GI+++E+  G
Sbjct: 199 VDIWSLGIMVIEMIDG 214

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

 Score = 78.3 bits (193), Expect = 9e-16
 Identities = 68/217 (31%), Positives = 100/217 (46%), Gaps = 41/217 (18%)

Query: 336 NLVGSGGFGRVYRGLMPSLGLEVAIKRIG-HNSQQGMK-EFVAEIMSMGRLRHRNLVQLH 393
             +G G +G+VY+      G  VA+K++   N ++G     + EI  + +L HRN+V L 
Sbjct: 13  GQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLK 72

Query: 394 GWCR-KQDEL---------LLVYDYVPNGSLDKLLFDKDHKLRKLL-------TWDQRYK 436
                KQD L          LV++Y+            DH L  LL       + D    
Sbjct: 73  EIVTDKQDALDFKKDKGAFYLVFEYM------------DHDLMGLLESGLVHFSEDHIKS 120

Query: 437 ILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHI 496
            +  + + L Y H    +  +HRD+K SNILL+     KL DFGLA++Y    +   T+ 
Sbjct: 121 FMKQLLEGLNYCH---KKNFLHRDIKCSNILLNNKGQIKLADFGLARLYNSEESRPYTNK 177

Query: 497 VGTLGYLAPEL----TRTGKATTSTDVYSYGILMLEV 529
           V TL Y  PEL     R G A    DV+S G ++ E+
Sbjct: 178 VITLWYRPPELLLGEERYGPA---IDVWSCGCILGEL 211

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302

>gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

 Score = 77.5 bits (191), Expect = 9e-16
 Identities = 54/201 (26%), Positives = 103/201 (51%), Gaps = 20/201 (9%)

Query: 337 LVGSGGFGRVYRGLMPSLG---LEVAIKRIGHNSQQGMKE-FVAEIMSMGRLRHRNLVQL 392
            +G G FG VY+G+  S     + VA+K   + +   ++E F+ E   M +  H ++V+L
Sbjct: 13  CIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKL 72

Query: 393 HGWCRKQDELLLVYDYVPNGSLDKLLFDKDHK----LRKLLTWDQRYKILIGIAQSLLYL 448
            G    ++ + +V +  P G L   L  + +K    L  L+ +  +      ++ +L YL
Sbjct: 73  IGVI-TENPVWIVMELAPLGELRSYL--QVNKYSLDLASLILYSYQ------LSTALAYL 123

Query: 449 HEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELT 508
               ++R VHRD+   N+L+ +    KLGDFGL++  E  +  + +     + ++APE  
Sbjct: 124 E---SKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESYYKASKGKLPIKWMAPESI 180

Query: 509 RTGKATTSTDVYSYGILMLEV 529
              + T+++DV+ +G+ M E+
Sbjct: 181 NFRRFTSASDVWMFGVCMWEI 201

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270

>gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

 Score = 77.3 bits (190), Expect = 1e-15
 Identities = 58/203 (28%), Positives = 101/203 (49%), Gaps = 26/203 (12%)

Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVA---EIMSMGRLRHRNLVQLHG 394
           +G G FG++Y     S      IK I   ++  +KE  A   E++ + +++H N+V    
Sbjct: 8   IGEGSFGKIYLAKAKSDSEHCVIKEIDL-TKMPVKEKEASKKEVILLAKMKHPNIVTFFA 66

Query: 395 WCRKQDELLLVYDYVPNGSLDK-------LLFDKDHKLRKLLTWDQRYKILIGIAQSLLY 447
             ++   L +V +Y   G L K       +LF +D    ++L+W       + I+  L +
Sbjct: 67  SFQENGRLFIVMEYCDGGDLMKRINRQRGVLFSED----QILSW------FVQISLGLKH 116

Query: 448 LHEECNQRVVHRDVKPSNILLDTY-LNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPE 506
           +H+   ++++HRD+K  NI L    + AKLGDFG+A+          T  VGT  YL+PE
Sbjct: 117 IHD---RKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSMELAYT-CVGTPYYLSPE 172

Query: 507 LTRTGKATTSTDVYSYGILMLEV 529
           + +       TD++S G ++ E+
Sbjct: 173 ICQNRPYNNKTDIWSLGCVLYEL 195

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257

>gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

 Score = 77.4 bits (190), Expect = 1e-15
 Identities = 61/212 (28%), Positives = 109/212 (51%), Gaps = 15/212 (7%)

Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +G+G FG V+     +   +VA+K +   S   ++ F+AE   M  L+H  LV+LH    
Sbjct: 14  LGAGQFGEVWMATY-NKHTKVAVKTMKPGSMS-VEAFLAEANVMKTLQHDKLVKLHAVVT 71

Query: 398 KQDELLLVYDYVPNGSL-DKLLFDKDHK--LRKLLTWDQRYKILIGIAQSLLYLHEECNQ 454
           K+  + ++ +++  GSL D L  D+  K  L KL+ +  +      IA+ + ++ +   +
Sbjct: 72  KE-PIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQ------IAEGMAFIEQ---R 121

Query: 455 RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKAT 514
             +HRD++ +NIL+   L  K+ DFGLA++ E             + + APE    G  T
Sbjct: 122 NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFT 181

Query: 515 TSTDVYSYGILMLEVACGRRSIEPQKAAAELL 546
             +DV+S+GIL++E+    R   P  +  E++
Sbjct: 182 IKSDVWSFGILLMEIVTYGRIPYPGMSNPEVI 213

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260

>gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

 Score = 77.5 bits (191), Expect = 1e-15
 Identities = 56/206 (27%), Positives = 98/206 (47%), Gaps = 15/206 (7%)

Query: 336 NLVGSGGFGRVYRGLM-----PSLGLEVAIKRIGHN-SQQGMKEFVAEIMSMGRLRHRNL 389
             +G G FG VY GL       ++ L+VA+K +  + S+Q   +F+ E + M +  H+N+
Sbjct: 12  RALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNI 71

Query: 390 VQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRK--LLTWDQRYKILIGIAQSLLY 447
           V+L G   ++    ++ + +  G L   L +   +  +   LT          +A+   Y
Sbjct: 72  VRLIGVSFERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKY 131

Query: 448 LHEECNQRVVHRDVKPSNILLDTY---LNAKLGDFGLAK-IYEHGANPQTTHIVGTLGYL 503
           L E      +HRD+   N LL        AK+ DFG+A+ IY      +    +  + ++
Sbjct: 132 LEE---NHFIHRDIAARNCLLTCKGPGRVAKIADFGMARDIYRASYYRKGGRAMLPIKWM 188

Query: 504 APELTRTGKATTSTDVYSYGILMLEV 529
            PE    G  T+ TDV+S+G+L+ E+
Sbjct: 189 PPEAFLDGIFTSKTDVWSFGVLLWEI 214

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277

>gnl|CDD|173647 cd05091, PTKc_Ror2, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

 Score = 77.4 bits (190), Expect = 1e-15
 Identities = 61/224 (27%), Positives = 108/224 (48%), Gaps = 23/224 (10%)

Query: 324 ELASVTKGFGEQNLVGSGGFGRVYRGLM--PSLGLE---VAIKRIGHNSQQGMKE-FVAE 377
           E+   T  F E+  +G   FG+VY+G +   + G +   VAIK +   ++  ++E F  E
Sbjct: 1   EINLSTVRFMEE--LGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHE 58

Query: 378 IMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSLDKLLF-----------DKDHKLR 426
            M   RL+H N+V L G   K+  L +++ Y  +  L + L            D D  ++
Sbjct: 59  AMMRSRLQHPNIVCLLGVVTKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVK 118

Query: 427 KLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IY 485
             L       I+  IA  + +L    +  VVH+D+   N+L+   LN K+ D GL + +Y
Sbjct: 119 STLEPADFVHIVTQIAAGMEFL---SSHHVVHKDLATRNVLVFDKLNVKISDLGLFREVY 175

Query: 486 EHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEV 529
                    + +  + +++PE    GK +  +D++SYG+++ EV
Sbjct: 176 AADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEV 219

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Length = 283

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score = 77.1 bits (190), Expect = 1e-15
 Identities = 56/199 (28%), Positives = 102/199 (51%), Gaps = 15/199 (7%)

Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGM-KEFVAEIMSMGRLRHRNLVQLHGWC 396
           +G+G  G V +      G  +A K +   ++  + K+ + E+  M   R   +V  +G  
Sbjct: 13  LGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAF 72

Query: 397 RKQDELLLVYDYVPNGSLDKLLFDKDHKLRKL--LTWDQRYKILIGIAQSLLYLHEECNQ 454
             ++ + +  +++  GSLD++        +K   +  +   KI + + + L YL+     
Sbjct: 73  LNENNICMCMEFMDCGSLDRIY-------KKGGPIPVEILGKIAVAVVEGLTYLYNV--H 123

Query: 455 RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKAT 514
           R++HRD+KPSNIL+++    KL DFG++       N      VGT  Y++PE  + GK T
Sbjct: 124 RIMHRDIKPSNILVNSRGQIKLCDFGVSG---ELINSIADTFVGTSTYMSPERIQGGKYT 180

Query: 515 TSTDVYSYGILMLEVACGR 533
             +DV+S GI ++E+A G+
Sbjct: 181 VKSDVWSLGISIIELALGK 199

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

>gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

 Score = 78.2 bits (192), Expect = 1e-15
 Identities = 58/206 (28%), Positives = 107/206 (51%), Gaps = 13/206 (6%)

Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMK-EFVAEIMSMGRLRHRNLVQLHGWC 396
           +G+G  G V++      GL +A K I    +  ++ + + E+  +       +V  +G  
Sbjct: 13  LGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 72

Query: 397 RKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRV 456
               E+ +  +++  GSLD++L        ++L      K+ I + + L YL E+   ++
Sbjct: 73  YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIKGLTYLREK--HKI 125

Query: 457 VHRDVKPSNILLDTYLNAKLGDFGLA-KIYEHGANPQTTHIVGTLGYLAPELTRTGKATT 515
           +HRDVKPSNIL+++    KL DFG++ ++ +  AN      VGT  Y++PE  +    + 
Sbjct: 126 MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS----FVGTRSYMSPERLQGTHYSV 181

Query: 516 STDVYSYGILMLEVACGRRSIEPQKA 541
            +D++S G+ ++E+A GR  I P  A
Sbjct: 182 QSDIWSMGLSLVEMAIGRYPIPPPDA 207

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333

>gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

 Score = 78.1 bits (193), Expect = 2e-15
 Identities = 66/216 (30%), Positives = 104/216 (48%), Gaps = 35/216 (16%)

Query: 335 QNLVGSGGFGRVYRGLMPSLGLEVAIKRIG---HN--SQQGMKEFVAEIMSMGRLRHRNL 389
            + +G G +G V        G++VAIK+I    H    Q+ ++E    I  + R +H N+
Sbjct: 10  LSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLRE----IKILRRFKHENI 65

Query: 390 VQLHGWCRKQD-----ELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQ----RYKILIG 440
           + +    R        ++ +V + +    L KL+  +       L+ D      Y+IL G
Sbjct: 66  IGILDIIRPPSFESFNDVYIVQELMET-DLYKLIKTQH------LSNDHIQYFLYQILRG 118

Query: 441 IAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIY--EHGANPQTTHIVG 498
               L Y+H   N  V+HRD+KPSN+LL+T  + K+ DFGLA+I   EH      T  V 
Sbjct: 119 ----LKYIHS-AN--VLHRDLKPSNLLLNTNCDLKICDFGLARIADPEHDHTGFLTEYVA 171

Query: 499 TLGYLAPELTRTGKA-TTSTDVYSYGILMLEVACGR 533
           T  Y APE+    K  T + D++S G ++ E+   R
Sbjct: 172 TRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNR 207

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 76.3 bits (188), Expect = 2e-15
 Identities = 53/208 (25%), Positives = 101/208 (48%), Gaps = 21/208 (10%)

Query: 338 VGSGGFGR--VYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLRHRNLVQLH 393
           +G G FG   +YR         V  K +     S++  ++ + EI+ +  L+H N++  +
Sbjct: 8   LGKGAFGEATLYR--RTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYY 65

Query: 394 GWCRKQDELLLVYDYVPNGSL-DKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEEC 452
                 + LL+  +Y   G+L DK++     +  +L   +     L  I  ++ Y+H+  
Sbjct: 66  NHFMDDNTLLIEMEYANGGTLYDKIV----RQKGQLFEEEMVLWYLFQIVSAVSYIHKA- 120

Query: 453 NQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTH---IVGTLGYLAPELTR 509
              ++HRD+K  NI L      KLGDFG++KI       + +    +VGT  Y++PEL +
Sbjct: 121 --GILHRDIKTLNIFLTKAGLIKLGDFGISKIL----GSEYSMAETVVGTPYYMSPELCQ 174

Query: 510 TGKATTSTDVYSYGILMLEVACGRRSIE 537
             K    +D+++ G ++ E+   +R+ +
Sbjct: 175 GVKYNFKSDIWALGCVLYELLTLKRTFD 202

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

 Score = 77.4 bits (190), Expect = 2e-15
 Identities = 58/206 (28%), Positives = 107/206 (51%), Gaps = 13/206 (6%)

Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMK-EFVAEIMSMGRLRHRNLVQLHGWC 396
           +G+G  G V +      GL +A K I    +  ++ + + E+  +       +V  +G  
Sbjct: 13  LGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 72

Query: 397 RKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRV 456
               E+ +  +++  GSLD++L +      ++L      K+ I + + L YL E+   ++
Sbjct: 73  YSDGEISICMEHMDGGSLDQVLKEAKRIPEEILG-----KVSIAVLRGLAYLREK--HQI 125

Query: 457 VHRDVKPSNILLDTYLNAKLGDFGLA-KIYEHGANPQTTHIVGTLGYLAPELTRTGKATT 515
           +HRDVKPSNIL+++    KL DFG++ ++ +  AN      VGT  Y++PE  +    + 
Sbjct: 126 MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS----FVGTRSYMSPERLQGTHYSV 181

Query: 516 STDVYSYGILMLEVACGRRSIEPQKA 541
            +D++S G+ ++E+A GR  I P  A
Sbjct: 182 QSDIWSMGLSLVELAIGRYPIPPPDA 207

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331

>gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

 Score = 76.0 bits (187), Expect = 2e-15
 Identities = 64/208 (30%), Positives = 107/208 (51%), Gaps = 27/208 (12%)

Query: 336 NLVGSGGFGRVYRG-LMPSLGLEV--AIK---RIGHNSQQGMKEFVAEIMSMGRLRHRNL 389
            ++G G FG VY G L+ S G ++  A+K   RI     + +++F+ E + M    H N+
Sbjct: 1   RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRI--TDLEEVEQFLKEGIIMKDFSHPNV 58

Query: 390 VQLHGWCRKQDEL-LLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIG----IAQS 444
           + L G C   +   L+V  Y+ +G L   +  + H        +   K LIG    +A+ 
Sbjct: 59  LSLLGICLPSEGSPLVVLPYMKHGDLRNFIRSETH--------NPTVKDLIGFGLQVAKG 110

Query: 445 LLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IY--EHGANPQTTHIVGTLG 501
           + YL    +++ VHRD+   N +LD     K+ DFGLA+ IY  E+ +    T     + 
Sbjct: 111 MEYL---ASKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHNHTGAKLPVK 167

Query: 502 YLAPELTRTGKATTSTDVYSYGILMLEV 529
           ++A E  +T K TT +DV+S+G+L+ E+
Sbjct: 168 WMALESLQTQKFTTKSDVWSFGVLLWEL 195

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262

>gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

 Score = 76.2 bits (187), Expect = 3e-15
 Identities = 56/210 (26%), Positives = 101/210 (48%), Gaps = 21/210 (10%)

Query: 338 VGSGGFGRVYRGLMPSLGLE----VAIKRI-GHNSQQGMKEFVAEIMSMGRLRHRNLVQL 392
           +G   FG++Y+G +   G++    VAIK +   N+ Q   EF  E   M  L H N+V L
Sbjct: 13  LGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCL 72

Query: 393 HGWCRKQDELLLVYDYVPNGSLDKLLF------------DKDHKLRKLLTWDQRYKILIG 440
            G   ++  + ++++Y+  G L + L             D+D  ++  L       I I 
Sbjct: 73  LGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQ 132

Query: 441 IAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IYEHGANPQTTHIVGT 499
           IA  + YL    +   VH+D+   NIL+   L+ K+ D GL++ IY           +  
Sbjct: 133 IAAGMEYL---SSHFFVHKDLAARNILIGEQLHVKISDLGLSREIYSADYYRVQPKSLLP 189

Query: 500 LGYLAPELTRTGKATTSTDVYSYGILMLEV 529
           + ++ PE    GK ++ +D++S+G+++ E+
Sbjct: 190 IRWMPPEAIMYGKFSSDSDIWSFGVVLWEI 219

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 76.0 bits (187), Expect = 3e-15
 Identities = 64/247 (25%), Positives = 110/247 (44%), Gaps = 20/247 (8%)

Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHN---SQQGMKEFVAEIMSMGRLRHRNLVQLHG 394
           +G GGFG V    + + G   A K++       ++G +  + E   + ++  R +V L  
Sbjct: 1   LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAY 60

Query: 395 WCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRY---KILIGIAQSLLYLHEE 451
               +D+L LV   +  G L   +++              +   +I+ G    L +LH+ 
Sbjct: 61  AFETKDDLCLVMTLMNGGDLKYHIYN--VGEPGFPEARAIFYAAQIICG----LEHLHQR 114

Query: 452 CNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTG 511
              R+V+RD+KP N+LLD + N ++ D GLA   E     +     GT GY+APE+ +  
Sbjct: 115 ---RIVYRDLKPENVLLDDHGNVRISDLGLA--VELKGGKKIKGRAGTPGYMAPEVLQGE 169

Query: 512 KATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYY 571
               S D ++ G  + E+  GR    P +   E +  + +K   LE  +      + +  
Sbjct: 170 VYDFSVDWFALGCTLYEMIAGR---SPFRQRKEKVEKEELKRRTLEMAVEYPDKFSPEAK 226

Query: 572 DLAEAEL 578
           DL EA L
Sbjct: 227 DLCEALL 233

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 75.9 bits (186), Expect = 3e-15
 Identities = 72/274 (26%), Positives = 121/274 (44%), Gaps = 30/274 (10%)

Query: 332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIG-HNSQQGMKEFVAEIMSMGRLRHRNLV 390
           F +   +G G FG VY+G+       VAIK I    ++  +++   EI  + +     + 
Sbjct: 6   FTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 65

Query: 391 QLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRY--KILIGIAQSLLYL 448
           + +G   K  +L ++ +Y+  GS   LL        K    ++ Y   IL  I + L YL
Sbjct: 66  RYYGSYLKGTKLWIIMEYLGGGSALDLL--------KPGPLEETYIATILREILKGLDYL 117

Query: 449 HEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELT 508
           H E   R +HRD+K +N+LL    + KL DFG+A         + T  VGT  ++APE+ 
Sbjct: 118 HSE---RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNT-FVGTPFWMAPEVI 173

Query: 509 RTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTL 568
           +        D++S GI  +E+A G            L L+       LEG+ ++      
Sbjct: 174 KQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSPPTLEGQYSKP----- 228

Query: 569 DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVE 602
            + +  EA         C   +P +RP  + +++
Sbjct: 229 -FKEFVEA---------CLNKDPRFRPTAKELLK 252

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

 Score = 75.4 bits (185), Expect = 4e-15
 Identities = 58/196 (29%), Positives = 99/196 (50%), Gaps = 10/196 (5%)

Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIG--HNSQQGMKEFVAEIMSMGRLRHRNLVQL-HG 394
           VG G +G V      + G +  IK++   + S++  K    E   + +L+H N+V     
Sbjct: 8   VGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRES 67

Query: 395 WCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQ 454
           W  +   L +V  +   G L   L  K+ K  KLL  +Q  +  + IA +L YLHE+   
Sbjct: 68  WEGEDGLLYIVMGFCEGGDLYHKL--KEQK-GKLLPENQVVEWFVQIAMALQYLHEK--- 121

Query: 455 RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKAT 514
            ++HRD+K  N+ L      K+GD G+A++ E+  +  +T ++GT  Y++PEL       
Sbjct: 122 HILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCDMAST-LIGTPYYMSPELFSNKPYN 180

Query: 515 TSTDVYSYGILMLEVA 530
             +DV++ G  + E+A
Sbjct: 181 YKSDVWALGCCVYEMA 196

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257

>gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

 Score = 76.2 bits (187), Expect = 4e-15
 Identities = 63/208 (30%), Positives = 101/208 (48%), Gaps = 31/208 (14%)

Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIG-HNSQQGMK-EFVAEIMSMGRLR---HRNLVQL 392
           +G G +G VY+   P  G  VA+K +    ++ G+    V E+  + RL    H N+V+L
Sbjct: 8   IGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRL 67

Query: 393 HGWCR-----KQDELLLVYDYVPNGSLDKLLFDKDHK--LRKL----LTWDQRYKILIGI 441
              C      ++ ++ LV+++V          D+D +  L K+    L  +    ++   
Sbjct: 68  MDVCATSRTDRETKVTLVFEHV----------DQDLRTYLDKVPPPGLPAETIKDLMRQF 117

Query: 442 AQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLG 501
            + L +LH  C   +VHRD+KP NIL+ +    KL DFGLA+IY        T +V TL 
Sbjct: 118 LRGLDFLHANC---IVHRDLKPENILVTSGGQVKLADFGLARIYSC--QMALTPVVVTLW 172

Query: 502 YLAPELTRTGKATTSTDVYSYGILMLEV 529
           Y APE+       T  D++S G +  E+
Sbjct: 173 YRAPEVLLQSTYATPVDMWSVGCIFAEM 200

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score = 75.9 bits (186), Expect = 4e-15
 Identities = 59/196 (30%), Positives = 96/196 (48%), Gaps = 12/196 (6%)

Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +G G  G VY  +  + G EVAIK++    Q   +  + EI+ M   ++ N+V       
Sbjct: 27  IGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 86

Query: 398 KQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVV 457
             DEL +V +Y+  GSL  ++ +        +   Q   +     Q+L +LH   + +V+
Sbjct: 87  VGDELWVVMEYLAGGSLTDVVTE------TCMDEGQIAAVCRECLQALDFLH---SNQVI 137

Query: 458 HRDVKPSNILLDTYLNAKLGDFGL-AKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTS 516
           HRD+K  NILL    + KL DFG  A+I    +   T  +VGT  ++APE+         
Sbjct: 138 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST--MVGTPYWMAPEVVTRKAYGPK 195

Query: 517 TDVYSYGILMLEVACG 532
            D++S GI+ +E+  G
Sbjct: 196 VDIWSLGIMAIEMVEG 211

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

 Score = 76.2 bits (187), Expect = 5e-15
 Identities = 61/199 (30%), Positives = 95/199 (47%), Gaps = 19/199 (9%)

Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQ---GMKEFVAEIMSMGRLRHRNLVQLHG 394
           +G G FG VY          VA+K++ ++ +Q     ++ + E+  + +L+H N ++  G
Sbjct: 29  IGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKG 88

Query: 395 WCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQ 454
              K+    LV +Y    + D L   + HK  K L   +   I  G  Q L YLH     
Sbjct: 89  CYLKEHTAWLVMEYCLGSASDLL---EVHK--KPLQEVEIAAITHGALQGLAYLHSHN-- 141

Query: 455 RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRT---G 511
            ++HRD+K  NILL      KL DFG A      ++P  +  VGT  ++APE+      G
Sbjct: 142 -MIHRDIKAGNILLTEPGQVKLADFGSASK----SSPANS-FVGTPYWMAPEVILAMDEG 195

Query: 512 KATTSTDVYSYGILMLEVA 530
           +     DV+S GI  +E+A
Sbjct: 196 QYDGKVDVWSLGITCIELA 214

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313

>gnl|CDD|234389 TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein

 Score = 78.3 bits (193), Expect = 7e-15
 Identities = 61/196 (31%), Positives = 97/196 (49%), Gaps = 21/196 (10%)

Query: 355 GLEVAIKRIGHNSQQGMKE---FVAEIMSMGRLRHRNLVQLHGWCRKQDELLL-VYDYVP 410
           G EVAIK +  ++ +   +   F  E     RL H N+V L         LL  V++YVP
Sbjct: 3   GHEVAIKLLRTDAPEEEHQRARFRRETALCARLYHPNIVALLDSGEAPPGLLFAVFEYVP 62

Query: 411 NGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILL-- 468
             +L ++L   D  L    T     ++L  +A +    H   NQ +VHRD+KP NI++  
Sbjct: 63  GRTLREVL-AADGALPAGETGRLMLQVLDALACA----H---NQGIVHRDLKPQNIMVSQ 114

Query: 469 -DTYLNAKLGDFGLAKIYE--HGANPQ----TTHIVGTLGYLAPELTRTGKATTSTDVYS 521
                +AK+ DFG+  +      A+      TT ++GT  Y APE  R    T ++D+Y+
Sbjct: 115 TGVRPHAKVLDFGIGTLLPGVRDADVATLTRTTEVLGTPTYCAPEQLRGEPVTPNSDLYA 174

Query: 522 YGILMLEVACGRRSIE 537
           +G++ LE   G+R ++
Sbjct: 175 WGLIFLECLTGQRVVQ 190

This model represents proteins of 1350 in length, in multiple species of Burkholderia, in Acidovorax avenae subsp. citrulli AAC00-1 and Delftia acidovorans SPH-1, and in multiple copies in Sorangium cellulosum, in genomic neighborhoods that include a cyclodehydratase/docking scaffold fusion protein (TIGR03882) and a member of the thiazole/oxazole modified metabolite (TOMM) precursor family TIGR03795. It has a kinase domain in the N-terminal 300 amino acids, followed by a cyclase homology domain, followed by regions without named domain definitions. It is a probable bacteriocin-like metabolite biosynthesis protein [Cellular processes, Toxin production and resistance]. Length = 1266

>gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

 Score = 74.7 bits (183), Expect = 8e-15
 Identities = 68/274 (24%), Positives = 123/274 (44%), Gaps = 30/274 (10%)

Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIG---HNSQQGMKEFVAEIMSMGRLRHRNLVQLHG 394
           +G G F  VYR         VA+K++        +  ++ V EI  + +L H N+++   
Sbjct: 10  IGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLD 69

Query: 395 WCRKQDELLLVYDYVPNGSLDKLL--FDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEEC 452
              + +EL +V +    G L +++  F K    ++L+     +K  + +  ++ ++H   
Sbjct: 70  SFIEDNELNIVLELADAGDLSQMIKYFKKQ---KRLIPERTVWKYFVQLCSAVEHMH--- 123

Query: 453 NQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGK 512
           ++RV+HRD+KP+N+ +      KLGD GL + +        + +VGT  Y++PE      
Sbjct: 124 SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHS-LVGTPYYMSPERIHENG 182

Query: 513 ATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYYD 572
               +D++S G L+ E+A  +      K    L              + Q I+Q  DY  
Sbjct: 183 YNFKSDIWSLGCLLYEMAALQSPFYGDK--MNLF------------SLCQKIEQC-DYPP 227

Query: 573 LAE---AELVLNLGLFCSAPNPVYRPDMRRVVEF 603
           L     +E +  L   C  P+P  RPD+  V + 
Sbjct: 228 LPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQI 261

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267

>gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

 Score = 75.4 bits (185), Expect = 8e-15
 Identities = 66/210 (31%), Positives = 106/210 (50%), Gaps = 26/210 (12%)

Query: 332 FGEQNLVGSGGFGRVYRGLMPSLG----LEVAIKRIGH-NSQQGMKEFVAEIMSMGRLRH 386
           F +  ++GSG FG VY+GL    G    + VAIK +    S +  KE + E   M  + +
Sbjct: 9   FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 68

Query: 387 RNLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLR----KLLTWDQRYKILIGIA 442
            ++ +L G C     + L+   +P G L  L + ++HK       LL W       + IA
Sbjct: 69  PHVCRLLGICLTS-TVQLITQLMPFGCL--LDYVREHKDNIGSQYLLNW------CVQIA 119

Query: 443 QSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVG---T 499
           + + YL E   +R+VHRD+   N+L+ T  + K+ DFGLAK+   GA+ +  H  G    
Sbjct: 120 KGMNYLEE---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLL--GADEKEYHAEGGKVP 174

Query: 500 LGYLAPELTRTGKATTSTDVYSYGILMLEV 529
           + ++A E       T  +DV+SYG+ + E+
Sbjct: 175 IKWMALESILHRIYTHQSDVWSYGVTVWEL 204

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 74.7 bits (183), Expect = 8e-15
 Identities = 69/276 (25%), Positives = 120/276 (43%), Gaps = 34/276 (12%)

Query: 332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIG-HNSQQGMKEFVAEIMSMGRLRHRNLV 390
           F +   +G G FG V++G+       VAIK I    ++  +++   EI  + +     + 
Sbjct: 6   FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 65

Query: 391 QLHGWCRKQDELLLVYDYVPNGSLDKLL----FDKDHKLRKLLTWDQRYKILIGIAQSLL 446
           + +G   K  +L ++ +Y+  GS   LL    FD+           Q   +L  I + L 
Sbjct: 66  KYYGSYLKGTKLWIIMEYLGGGSALDLLRAGPFDEF----------QIATMLKEILKGLD 115

Query: 447 YLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPE 506
           YLH E   + +HRD+K +N+LL    + KL DFG+A         + T  VGT  ++APE
Sbjct: 116 YLHSE---KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNT-FVGTPFWMAPE 171

Query: 507 LTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQ 566
           + +     +  D++S GI  +E+A G            L L+       L GE ++   +
Sbjct: 172 VIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNPPTLTGEFSKPFKE 231

Query: 567 TLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVE 602
            +D                C   +P +RP  + +++
Sbjct: 232 FIDA---------------CLNKDPSFRPTAKELLK 252

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

 Score = 75.0 bits (185), Expect = 1e-14
 Identities = 56/197 (28%), Positives = 86/197 (43%), Gaps = 31/197 (15%)

Query: 331 GFGEQNLVGSGGFGRVY--RGLMPSLGLEVAIKRIGHNSQQGM---KEFVAEIMSMGRLR 385
            +  +  +G G +GRVY  +      G E AIK+   + +Q     +    EI  +  L+
Sbjct: 1   KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELK 60

Query: 386 HRNLVQLHGWC--RKQDELLLVYDYVPNGSLDKLLFDKDHKLR-------KLLTWDQRYK 436
           H N+V L           + L++DY  +     + F +  K         K L W    +
Sbjct: 61  HENVVSLVEVFLEHADKSVYLLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLW----Q 116

Query: 437 ILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNA----KLGDFGLAKIYEHGANPQ 492
           IL G+     YLH      V+HRD+KP+NIL+          K+GD GLA+++     P 
Sbjct: 117 ILNGVH----YLHS---NWVLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNAPLKPL 169

Query: 493 TT--HIVGTLGYLAPEL 507
                +V T+ Y APEL
Sbjct: 170 ADLDPVVVTIWYRAPEL 186

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316

>gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

 Score = 75.4 bits (186), Expect = 1e-14
 Identities = 60/226 (26%), Positives = 90/226 (39%), Gaps = 45/226 (19%)

Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMS----MGRLRHRNLVQL 392
           ++G G FG V+       G   A+K +   S    +  +A + +    +       +V+L
Sbjct: 8   VIGRGAFGEVWLVRDKDTGQVYAMKVL-RKSDMIKRNQIAHVRAERDILADADSPWIVKL 66

Query: 393 HGWCRKQDE--LLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHE 450
           +     QDE  L LV +Y+P G L  LL  KD    +     + Y     IA+ +L L  
Sbjct: 67  Y--YSFQDEEHLYLVMEYMPGGDLMNLLIRKD-VFPE--ETARFY-----IAELVLALDS 116

Query: 451 ECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIY------------------------E 486
                 +HRD+KP NIL+D   + KL DFGL K                           
Sbjct: 117 VHKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVR 176

Query: 487 HGANPQTTH----IVGTLGYLAPELTRTGKATTSTDVYSYGILMLE 528
              + Q        VGT  Y+APE+ R        D +S G+++ E
Sbjct: 177 RRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYE 222

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score = 74.7 bits (183), Expect = 1e-14
 Identities = 55/196 (28%), Positives = 98/196 (50%), Gaps = 12/196 (6%)

Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +G G  G V    + S G  VA+K++    QQ  +    E++ M   +H N+V+++    
Sbjct: 28  IGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 87

Query: 398 KQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVV 457
             DEL +V +++  G+L  ++          +  +Q   + + + ++L  LH    Q V+
Sbjct: 88  VGDELWVVMEFLEGGALTDIV------THTRMNEEQIAAVCLAVLKALSVLHA---QGVI 138

Query: 458 HRDVKPSNILLDTYLNAKLGDFGL-AKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTS 516
           HRD+K  +ILL      KL DFG  A++ +    P+   +VGT  ++APEL         
Sbjct: 139 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKE--VPRRKSLVGTPYWMAPELISRLPYGPE 196

Query: 517 TDVYSYGILMLEVACG 532
            D++S GI+++E+  G
Sbjct: 197 VDIWSLGIMVIEMVDG 212

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

 Score = 75.1 bits (184), Expect = 1e-14
 Identities = 65/207 (31%), Positives = 97/207 (46%), Gaps = 19/207 (9%)

Query: 330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRI---GHNSQQGMKEFVAEIMSMGRLRH 386
           K F +   +G G FG VY          VAIK++   G  S +  ++ + E+  + R++H
Sbjct: 25  KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKH 84

Query: 387 RNLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLL 446
            N ++  G   ++    LV +Y    + D L   K     K L   +   I  G  Q L 
Sbjct: 85  PNSIEYKGCYLREHTAWLVMEYCLGSASDLLEVHK-----KPLQEVEIAAITHGALQGLA 139

Query: 447 YLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPE 506
           YLH   +  ++HRD+K  NILL      KL DFG A I    A+P  +  VGT  ++APE
Sbjct: 140 YLH---SHNMIHRDIKAGNILLTEPGQVKLADFGSASI----ASPANS-FVGTPYWMAPE 191

Query: 507 LTRT---GKATTSTDVYSYGILMLEVA 530
           +      G+     DV+S GI  +E+A
Sbjct: 192 VILAMDEGQYDGKVDVWSLGITCIELA 218

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317

>gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional

 Score = 75.2 bits (185), Expect = 1e-14
 Identities = 63/226 (27%), Positives = 98/226 (43%), Gaps = 37/226 (16%)

Query: 336 NLVGSGGFGRVYRGLMPSLGLEVAIKRI----GHNSQQGMKEFVA----------EIMSM 381
             +G G +G+V +      G  VAIK++      N     ++ V           E+  M
Sbjct: 15  AHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIM 74

Query: 382 GRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGI 441
             ++H N++ L     + D + LV D +    L K++   D K+R  LT  Q   IL+ I
Sbjct: 75  NEIKHENIMGLVDVYVEGDFINLVMDIM-ASDLKKVV---DRKIR--LTESQVKCILLQI 128

Query: 442 AQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIY------------EHGA 489
              L  LH       +HRD+ P+NI +++    K+ DFGLA+ Y            E   
Sbjct: 129 LNGLNVLH---KWYFMHRDLSPANIFINSKGICKIADFGLARRYGYPPYSDTLSKDETMQ 185

Query: 490 -NPQTTHIVGTLGYLAPELTR-TGKATTSTDVYSYGILMLEVACGR 533
              + T  V TL Y APEL     K   + D++S G +  E+  G+
Sbjct: 186 RREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGK 231

Length = 335

>gnl|CDD|133247 cd05116, PTKc_Syk, Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

 Score = 73.8 bits (181), Expect = 1e-14
 Identities = 63/197 (31%), Positives = 101/197 (51%), Gaps = 15/197 (7%)

Query: 338 VGSGGFGRVYRGLMPSLGLE--VAIKRIGH-NSQQGMK-EFVAEIMSMGRLRHRNLVQLH 393
           +GSG FG V +G+      E  VA+K + + N+   +K E + E   M +L +  +V++ 
Sbjct: 3   LGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMI 62

Query: 394 GWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECN 453
           G C + +  +LV +    G L+K L    H   K +T     +++  ++  + YL EE N
Sbjct: 63  GIC-EAESWMLVMELAELGPLNKFLQKNKHVTEKNIT-----ELVHQVSMGMKYL-EETN 115

Query: 454 QRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGAN--PQTTHIVGTLGYLAPELTRTG 511
              VHRD+   N+LL T   AK+ DFGL+K      N     TH    + + APE     
Sbjct: 116 --FVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTHGKWPVKWYAPECMNYY 173

Query: 512 KATTSTDVYSYGILMLE 528
           K ++ +DV+S+G+LM E
Sbjct: 174 KFSSKSDVWSFGVLMWE 190

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. More recently, Syk expression has been detected in other cell types (including epithelial cells, vascular endothelial cells, neurons, hepatocytes, and melanocytes), suggesting a variety of biological functions in non-immune cells. Syk plays a critical role in maintaining vascular integrity and in wound healing during embryogenesis. It also regulates Vav3, which is important in osteoclast function including bone development. In breast epithelial cells, where Syk acts as a negative regulator for epidermal growth factor receptor (EGFR) signaling, loss of Syk expression is associated with abnormal proliferation during cancer development suggesting a potential role as a tumor suppressor. In mice, Syk has been shown to inhibit malignant transformation of mammary epithelial cells induced with murine mammary tumor virus (MMTV). Length = 257

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score = 74.9 bits (185), Expect = 2e-14
 Identities = 64/210 (30%), Positives = 109/210 (51%), Gaps = 28/210 (13%)

Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIG---HNSQQGMKEFVAEIMSMGRLR-HRNLVQLH 393
           +G G +G V++ +       VA+K+I     N+    + F  EIM +  L  H N+V+L 
Sbjct: 15  LGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTF-REIMFLQELGDHPNIVKLL 73

Query: 394 GWCRKQD--ELLLVYDYVP---NGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYL 448
              + ++  ++ LV++Y+    +  +   + +  HK         RY I+  + ++L Y+
Sbjct: 74  NVIKAENDKDIYLVFEYMETDLHAVIRANILEDVHK---------RY-IMYQLLKALKYI 123

Query: 449 HEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK----IYEHGANPQTTHIVGTLGYLA 504
           H   +  V+HRD+KPSNILL++    KL DFGLA+    + E+  NP  T  V T  Y A
Sbjct: 124 H---SGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSELEENPENPVLTDYVATRWYRA 180

Query: 505 PE-LTRTGKATTSTDVYSYGILMLEVACGR 533
           PE L  + + T   D++S G ++ E+  G+
Sbjct: 181 PEILLGSTRYTKGVDMWSVGCILGEMLLGK 210

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 74.4 bits (182), Expect = 2e-14
 Identities = 57/196 (29%), Positives = 97/196 (49%), Gaps = 12/196 (6%)

Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +G G  G VY  +  + G EVAI+++    Q   +  + EI+ M   ++ N+V       
Sbjct: 28  IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87

Query: 398 KQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVV 457
             DEL +V +Y+  GSL  ++ +        +   Q   +     Q+L +LH   + +V+
Sbjct: 88  VGDELWVVMEYLAGGSLTDVVTET------CMDEGQIAAVCRECLQALEFLH---SNQVI 138

Query: 458 HRDVKPSNILLDTYLNAKLGDFGL-AKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTS 516
           HRD+K  NILL    + KL DFG  A+I    +  + + +VGT  ++APE+         
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS--KRSTMVGTPYWMAPEVVTRKAYGPK 196

Query: 517 TDVYSYGILMLEVACG 532
            D++S GI+ +E+  G
Sbjct: 197 VDIWSLGIMAIEMIEG 212

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

 Score = 74.0 bits (181), Expect = 2e-14
 Identities = 71/275 (25%), Positives = 120/275 (43%), Gaps = 32/275 (11%)

Query: 332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIG-HNSQQGMKEFVAEIMSMGRLRHRNLV 390
           F +   +G G FG V++G+       VAIK I    ++  +++   EI  + +     + 
Sbjct: 6   FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 65

Query: 391 QLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHE 450
           + +G   K  +L ++ +Y+  GS   LL          L   Q   IL  I + L YLH 
Sbjct: 66  KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP------LDETQIATILREILKGLDYLHS 119

Query: 451 ECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRT 510
           E   + +HRD+K +N+LL  +   KL DFG+A         +    VGT  ++APE+ + 
Sbjct: 120 E---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTD-TQIKRNTFVGTPFWMAPEVIKQ 175

Query: 511 GKATTSTDVYSYGILMLEVACGR---RSIEPQKAAAELLLVDWVKELHLEGEITQAIDQT 567
               +  D++S GI  +E+A G      + P K    L L+       LEG  ++ + + 
Sbjct: 176 SAYDSKADIWSLGITAIELAKGEPPHSELHPMKV---LFLIPKNNPPTLEGNYSKPLKE- 231

Query: 568 LDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVE 602
                  EA         C    P +RP  + +++
Sbjct: 232 -----FVEA---------CLNKEPSFRPTAKELLK 252

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277

>gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

 Score = 73.9 bits (181), Expect = 2e-14
 Identities = 57/216 (26%), Positives = 104/216 (48%), Gaps = 28/216 (12%)

Query: 338 VGSGGFGRVY----RGLMPSLGLE----------VAIKRIGHN-SQQGMKEFVAEIMSMG 382
           +G G FG V+     GL   LG            VA+K +  + ++    +F+ EI  M 
Sbjct: 13  LGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMS 72

Query: 383 RLRHRNLVQLHGWCRKQDELLLVYDYVPNGSLDKLL--------FDKDHKLRKLLTWDQR 434
           RL++ N+++L G C   D L ++ +Y+ NG L++ L        F   + +  +   +  
Sbjct: 73  RLKNPNIIRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLL 132

Query: 435 YKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IYEHGANPQT 493
           Y + + IA  + YL    +   VHRD+   N L+  +   K+ DFG+++ +Y        
Sbjct: 133 Y-MAVQIASGMKYL---ASLNFVHRDLATRNCLVGNHYTIKIADFGMSRNLYSGDYYRIQ 188

Query: 494 THIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEV 529
              V  + ++A E    GK TT++DV+++G+ + E+
Sbjct: 189 GRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEM 224

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295

>gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

 Score = 73.7 bits (181), Expect = 2e-14
 Identities = 60/209 (28%), Positives = 102/209 (48%), Gaps = 14/209 (6%)

Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQG-MKEFVAEIMSMGRLRHRNLVQLHGWC 396
           +G G +G VY+ L    G+ +A+K I     +    + + E+  + +     +V  +G  
Sbjct: 9   LGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAF 68

Query: 397 RKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRV 456
             +  + +  +Y+  GSLDKL              D   +I   + + L +L EE N  +
Sbjct: 69  FIEGAVYMCMEYMDAGSLDKLYAGGVATEGI--PEDVLRRITYAVVKGLKFLKEEHN--I 124

Query: 457 VHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKA--- 513
           +HRDVKP+N+L++     KL DFG++      A+   T+I G   Y+APE  ++G     
Sbjct: 125 IHRDVKPTNVLVNGNGQVKLCDFGVSGNLV--ASLAKTNI-GCQSYMAPERIKSGGPNQN 181

Query: 514 ---TTSTDVYSYGILMLEVACGRRSIEPQ 539
              T  +DV+S G+ +LE+A GR    P+
Sbjct: 182 PTYTVQSDVWSLGLSILEMALGRYPYPPE 210

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286

>gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

 Score = 72.9 bits (179), Expect = 5e-14
 Identities = 54/216 (25%), Positives = 92/216 (42%), Gaps = 27/216 (12%)

Query: 338 VGSGGFGRVYRGLMPSL-----GLEVAIKRIGHN-SQQGMKEFVAEIMSMGRLRHRNLVQ 391
           +G G FGRV++   P L        VA+K +    S     +F  E   M    H N+V+
Sbjct: 13  IGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVK 72

Query: 392 LHGWCRKQDELLLVYDYVPNGSLDKLLFDKD--------HKLRKLLTWDQRY-------- 435
           L G C     + L+++Y+  G L++ L  +         H                    
Sbjct: 73  LLGVCAVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQ 132

Query: 436 -KILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLA-KIYEHGANPQT 493
             I   +A  + YL E   ++ VHRD+   N L+   +  K+ DFGL+  IY       +
Sbjct: 133 LCIAKQVAAGMAYLSE---RKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKAS 189

Query: 494 THIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEV 529
            +    + ++ PE     + TT +DV++YG+++ E+
Sbjct: 190 ENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEI 225

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288

>gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

 Score = 72.7 bits (178), Expect = 5e-14
 Identities = 61/218 (27%), Positives = 105/218 (48%), Gaps = 23/218 (10%)

Query: 332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMG------RLR 385
           F +  ++G GGFG V    + + G   A K++    ++ +K+   E M++       ++ 
Sbjct: 2   FRQYRVLGKGGFGEVCACQVRATGKMYACKKL---EKKRIKKRKGESMALNEKQILEKVN 58

Query: 386 HRNLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIG--IAQ 443
            R +V L      +D L LV   +  G L   ++           +++   +     I  
Sbjct: 59  SRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGEA-----GFEEGRAVFYAAEICC 113

Query: 444 SLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTH-IVGTLGY 502
            L  LH+E   R+V+RD+KP NILLD + + ++ D GLA    H    QT    VGT+GY
Sbjct: 114 GLEDLHQE---RIVYRDLKPENILLDDHGHIRISDLGLAV---HVPEGQTIKGRVGTVGY 167

Query: 503 LAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQK 540
           +APE+ +  + T S D ++ G L+ E+  G+   + +K
Sbjct: 168 MAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRK 205

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score = 72.1 bits (177), Expect = 6e-14
 Identities = 66/239 (27%), Positives = 105/239 (43%), Gaps = 33/239 (13%)

Query: 341 GGFGRVYRGLMPSLGLEVAIK------RIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHG 394
           G FG VY     S G   AIK       I  N    +K   A +M  G      + +L+ 
Sbjct: 7   GAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGE--SPYVAKLYY 64

Query: 395 WCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKL-LTWDQRY--KILIGIAQSLLYLHEE 451
             + +D L LV +Y+  G    L+      L  L   W ++Y  ++++G+      LH+ 
Sbjct: 65  SFQSKDYLYLVMEYLNGGDCASLI----KTLGGLPEDWAKQYIAEVVLGVE----DLHQ- 115

Query: 452 CNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTG 511
             + ++HRD+KP N+L+D   + KL DFGL++      N +    VGT  YLAPE     
Sbjct: 116 --RGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGL--ENKK---FVGTPDYLAPETILGV 168

Query: 512 KATTSTDVYSYGILMLEVACGRRSIE---PQKAAAELL--LVDWVKELHLEGEITQAID 565
                +D +S G ++ E   G        P      +L   ++W +E+  E    +A+D
Sbjct: 169 GDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRINWPEEVK-EFCSPEAVD 226

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

 Score = 72.4 bits (178), Expect = 6e-14
 Identities = 71/291 (24%), Positives = 131/291 (45%), Gaps = 44/291 (15%)

Query: 337 LVGSGGFGRVYRGLMPSLGLE-------VAIKRIGHN-SQQGMKEFVAEIMSMGRL-RHR 387
            +G G FG+V +    ++GL+       VA+K +  + +++ + + V+E+  M  + +H+
Sbjct: 19  PLGEGAFGQVVKA--EAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHK 76

Query: 388 NLVQLHGWCRKQDELLLVYDYVPNGSLDKLL-----------FDKDHKLRKLLTWDQRYK 436
           N++ L G C ++  L +V +Y  +G+L   L            D      + LT      
Sbjct: 77  NIINLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVS 136

Query: 437 ILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IYEHGANPQTTH 495
               +A+ + +L    +++ +HRD+   N+L+      K+ DFGLA+ I+      +TT+
Sbjct: 137 FAYQVARGMEFL---ASKKCIHRDLAARNVLVTEDHVMKIADFGLARDIHHIDYYRKTTN 193

Query: 496 IVGTLGY--LAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKE 553
             G L    +APE       T  +DV+S+G+L+ E+     S  P     E  L   +KE
Sbjct: 194 --GRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE--LFKLLKE 249

Query: 554 LHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL 604
            +    + +  + T + Y L            C    P  RP  +++VE L
Sbjct: 250 GY---RMEKPQNCTQELYHLM---------RDCWHEVPSQRPTFKQLVEDL 288

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293

>gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

 Score = 72.7 bits (178), Expect = 6e-14
 Identities = 60/213 (28%), Positives = 97/213 (45%), Gaps = 11/213 (5%)

Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMK-EFVAEIMSMGRLRHRNLVQLHGWC 396
           +G G +  V++G        VA+K I    ++G     + E+  +  L+H N+V LH   
Sbjct: 14  LGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIV 73

Query: 397 RKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRV 456
                L LV++Y     LDK L         +++       L  I + L Y H    ++V
Sbjct: 74  HTDKSLTLVFEY-----LDKDLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHR---RKV 125

Query: 457 VHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPE-LTRTGKATT 515
           +HRD+KP N+L++     KL DFGLA+         +  +V TL Y  P+ L  + + +T
Sbjct: 126 LHRDLKPQNLLINERGELKLADFGLARAKSVPTKTYSNEVV-TLWYRPPDVLLGSSEYST 184

Query: 516 STDVYSYGILMLEVACGRRSIEPQKAAAELLLV 548
             D++  G +  E+A GR          EL L+
Sbjct: 185 QIDMWGVGCIFFEMASGRPLFPGSTVEDELHLI 217

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score = 72.8 bits (179), Expect = 7e-14
 Identities = 46/151 (30%), Positives = 74/151 (49%), Gaps = 13/151 (8%)

Query: 385 RHRNLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQR-YKILIGIAQ 443
           +H  L QLH   + +D L  V +YV  G L   +F    +  +      R Y   I +  
Sbjct: 54  KHPFLTQLHSCFQTKDRLFFVMEYVNGGDL---MFHI-QRSGRFDEPRARFYAAEIVLG- 108

Query: 444 SLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTH-IVGTLGY 502
            L +LHE   + +++RD+K  N+LLD+  + K+ DFG+ K  E      TT    GT  Y
Sbjct: 109 -LQFLHE---RGIIYRDLKLDNVLLDSEGHIKIADFGMCK--EGILGGVTTSTFCGTPDY 162

Query: 503 LAPELTRTGKATTSTDVYSYGILMLEVACGR 533
           +APE+        + D ++ G+L+ E+  G+
Sbjct: 163 IAPEILSYQPYGPAVDWWALGVLLYEMLAGQ 193

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

 Score = 72.5 bits (178), Expect = 8e-14
 Identities = 63/201 (31%), Positives = 94/201 (46%), Gaps = 17/201 (8%)

Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMS-----MGRLRHRNLVQL 392
           +G G FG+V      + G   A+K +   +    KE    IM+     +  ++H  LV L
Sbjct: 3   IGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKE-QKHIMAERNVLLKNVKHPFLVGL 61

Query: 393 HGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIG-IAQSLLYLHEE 451
           H   +  D+L  V DYV  G   +L F   H  R+    + R +     IA +L YLH  
Sbjct: 62  HYSFQTADKLYFVLDYVNGG---ELFF---HLQRERSFPEPRARFYAAEIASALGYLHS- 114

Query: 452 CNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTG 511
               +++RD+KP NILLD+  +  L DFGL K      +  T+   GT  YLAPE+ R  
Sbjct: 115 --LNIIYRDLKPENILLDSQGHVVLTDFGLCK-EGIEHSKTTSTFCGTPEYLAPEVLRKQ 171

Query: 512 KATTSTDVYSYGILMLEVACG 532
               + D +  G ++ E+  G
Sbjct: 172 PYDRTVDWWCLGAVLYEMLYG 192

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323

>gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

 Score = 71.6 bits (175), Expect = 9e-14
 Identities = 58/197 (29%), Positives = 96/197 (48%), Gaps = 14/197 (7%)

Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +GSG +G VY+    + G   AIK I     +       EI+ M   +H N+V   G   
Sbjct: 17  IGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYL 76

Query: 398 KQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVV 457
           ++D+L +  ++   GSL  +     + +   L+  Q   +     Q L YLH   ++  +
Sbjct: 77  RRDKLWICMEFCGGGSLQDI-----YHVTGPLSESQIAYVSRETLQGLYYLH---SKGKM 128

Query: 458 HRDVKPSNILLDTYLNAKLGDFGL-AKIYEHGANPQTTHIVGTLGYLAPELT---RTGKA 513
           HRD+K +NILL    + KL DFG+ A+I    A  ++   +GT  ++APE+    R G  
Sbjct: 129 HRDIKGANILLTDNGHVKLADFGVSAQITATIAKRKS--FIGTPYWMAPEVAAVERKGGY 186

Query: 514 TTSTDVYSYGILMLEVA 530
               D+++ GI  +E+A
Sbjct: 187 NQLCDIWAVGITAIELA 203

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267

>gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

 Score = 72.1 bits (177), Expect = 1e-13
 Identities = 48/144 (33%), Positives = 80/144 (55%), Gaps = 12/144 (8%)

Query: 401 ELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRD 460
           E+ +  +++  GSLD++L         +L      KI I + + L YL E+   +++HRD
Sbjct: 73  EISICMEHMDGGSLDQVLKKAGRIPENILG-----KISIAVLRGLTYLREK--HKIMHRD 125

Query: 461 VKPSNILLDTYLNAKLGDFGLA-KIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDV 519
           VKPSNIL+++    KL DFG++ ++ +  AN      VGT  Y++PE  +    T  +D+
Sbjct: 126 VKPSNILVNSRGEIKLCDFGVSGQLIDSMANS----FVGTRSYMSPERLQGTHYTVQSDI 181

Query: 520 YSYGILMLEVACGRRSIEPQKAAA 543
           +S G+ ++E+A GR  I P  A  
Sbjct: 182 WSLGLSLVEMAIGRYPIPPPDAKE 205

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308

>gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

 Score = 71.2 bits (174), Expect = 1e-13
 Identities = 57/199 (28%), Positives = 95/199 (47%), Gaps = 10/199 (5%)

Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQ-QGMKEFVAEIMSMGR-LRHRNLVQLHG 394
           +VG G +G V +         VAIK+   + + + +KE     + M R L+  N+V+L  
Sbjct: 8   VVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKE 67

Query: 395 WCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQ 454
             R++ +L LV++YV    L+ L         ++       K+   I Q +  +H     
Sbjct: 68  AFRRRGKLYLVFEYVEKNMLELL--------EEMPNGVPPEKVRSYIYQLIKAIHWCHKN 119

Query: 455 RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKAT 514
            +VHRD+KP N+L+      KL DFG A+    G+N   T  V T  Y +PEL       
Sbjct: 120 DIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNANYTEYVATRWYRSPELLLGAPYG 179

Query: 515 TSTDVYSYGILMLEVACGR 533
            + D++S G ++ E++ G+
Sbjct: 180 KAVDMWSVGCILGELSDGQ 198

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287

>gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

 Score = 71.2 bits (174), Expect = 2e-13
 Identities = 56/198 (28%), Positives = 91/198 (45%), Gaps = 11/198 (5%)

Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMK-EFVAEIMSMGRLRHRNLVQLHGWC 396
           +G G +  VY+G        VA+K I    ++G     + E+  +  L+H N+V LH   
Sbjct: 14  LGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDII 73

Query: 397 RKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRV 456
             +  L LV++Y     LDK L          +        L  + + L Y H    ++V
Sbjct: 74  HTEKSLTLVFEY-----LDKDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHR---RKV 125

Query: 457 VHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPE-LTRTGKATT 515
           +HRD+KP N+L++     KL DFGLA+         +  +V TL Y  P+ L  +   +T
Sbjct: 126 LHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYSNEVV-TLWYRPPDILLGSTDYST 184

Query: 516 STDVYSYGILMLEVACGR 533
             D++  G +  E++ GR
Sbjct: 185 QIDMWGVGCIFYEMSTGR 202

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301

>gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

 Score = 70.4 bits (172), Expect = 2e-13
 Identities = 53/198 (26%), Positives = 88/198 (44%), Gaps = 16/198 (8%)

Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRI-----GHNSQQGMKEFVAEIMSMGRLRHRNLVQ 391
           +VG G FGR       +   + A+K I         +   KE V     + +++H N+V 
Sbjct: 7   VVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVL----LAKMKHPNIVA 62

Query: 392 LHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEE 451
                     L +V +Y   G L + +  K  +  KL   D   +  + +   + ++HE 
Sbjct: 63  FKESFEADGHLYIVMEYCDGGDLMQKI--KLQR-GKLFPEDTILQWFVQMCLGVQHIHE- 118

Query: 452 CNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTG 511
             +RV+HRD+K  NI L      KLGDFG A++         T+ VGT  Y+ PE+    
Sbjct: 119 --KRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYACTY-VGTPYYVPPEIWENM 175

Query: 512 KATTSTDVYSYGILMLEV 529
                +D++S G ++ E+
Sbjct: 176 PYNNKSDIWSLGCILYEL 193

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255

>gnl|CDD|165473 PHA03207, PHA03207, serine/threonine kinase US3; Provisional

 Score = 72.2 bits (177), Expect = 2e-13
 Identities = 36/98 (36%), Positives = 53/98 (54%), Gaps = 4/98 (4%)

Query: 440 GIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLA-KIYEHGANPQTTHIVG 498
            + ++L YLH    + ++HRDVK  NI LD   NA LGDFG A K+  H   PQ     G
Sbjct: 193 RLLEALAYLHG---RGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDTPQCYGWSG 249

Query: 499 TLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSI 536
           TL   +PEL         TD++S G+++ E++    ++
Sbjct: 250 TLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTL 287

Length = 392

>gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

 Score = 71.5 bits (175), Expect = 2e-13
 Identities = 64/203 (31%), Positives = 96/203 (47%), Gaps = 19/203 (9%)

Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMS-----MGRLRHRNLVQ 391
           ++G G FG+V      S G   A+K +   +    KE    IM+     +  L+H  LV 
Sbjct: 2   VIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKE-QNHIMAERNVLLKNLKHPFLVG 60

Query: 392 LHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEE 451
           LH   +  ++L  V DYV  G L    F    + R  L    R+     +A ++ YLH  
Sbjct: 61  LHYSFQTAEKLYFVLDYVNGGEL----FFHLQRERCFLEPRARF-YAAEVASAIGYLH-- 113

Query: 452 CNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQ--TTHIVGTLGYLAPELTR 509
            +  +++RD+KP NILLD+  +  L DFGL K    G  P+  T+   GT  YLAPE+ R
Sbjct: 114 -SLNIIYRDLKPENILLDSQGHVVLTDFGLCK---EGVEPEETTSTFCGTPEYLAPEVLR 169

Query: 510 TGKATTSTDVYSYGILMLEVACG 532
                 + D +  G ++ E+  G
Sbjct: 170 KEPYDRTVDWWCLGAVLYEMLYG 192

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321

>gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

 Score = 70.7 bits (173), Expect = 2e-13
 Identities = 54/200 (27%), Positives = 98/200 (49%), Gaps = 16/200 (8%)

Query: 335 QNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN-SQQGMKEFVAEIMSMGRLRHRNLVQLH 393
           Q ++G G  G VY+         +A+K I  + + +  K+ ++E+  + +     ++  +
Sbjct: 6   QEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFY 65

Query: 394 GWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECN 453
           G    ++ + +  +++  GSLD      +H L +         I + + + L YL    +
Sbjct: 66  GAFFVENRISICTEFMDGGSLDVYRKIPEHVLGR---------IAVAVVKGLTYL---WS 113

Query: 454 QRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKA 513
            +++HRDVKPSN+L++T    KL DFG++       N      VGT  Y+APE     + 
Sbjct: 114 LKILHRDVKPSNMLVNTRGQVKLCDFGVST---QLVNSIAKTYVGTNAYMAPERISGEQY 170

Query: 514 TTSTDVYSYGILMLEVACGR 533
              +DV+S GI  +E+A GR
Sbjct: 171 GIHSDVWSLGISFMELALGR 190

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279

>gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

 Score = 71.4 bits (175), Expect = 2e-13
 Identities = 69/217 (31%), Positives = 100/217 (46%), Gaps = 32/217 (14%)

Query: 328 VTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVA---------EI 378
           +T  + +   VG G FG V        G  VAIK+I       MK F           E+
Sbjct: 8   ITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKI-------MKPFSTPVLAKRTYREL 60

Query: 379 MSMGRLRHRNLVQLHG-WCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKI 437
             +  LRH N++ L   +    +++  V + +    L +LL      L K       Y+I
Sbjct: 61  KLLKHLRHENIISLSDIFISPLEDIYFVTELLGT-DLHRLL--TSRPLEKQFIQYFLYQI 117

Query: 438 LIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIV 497
           L G    L Y+H   +  VVHRD+KPSNIL++   + K+ DFGLA+I +    PQ T  V
Sbjct: 118 LRG----LKYVH---SAGVVHRDLKPSNILINENCDLKICDFGLARIQD----PQMTGYV 166

Query: 498 GTLGYLAPELTRT-GKATTSTDVYSYGILMLEVACGR 533
            T  Y APE+  T  K     D++S G +  E+  G+
Sbjct: 167 STRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGK 203

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328

>gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

 Score = 70.3 bits (172), Expect = 3e-13
 Identities = 61/244 (25%), Positives = 109/244 (44%), Gaps = 11/244 (4%)

Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHN---SQQGMKEFVAEIMSMGRLRHRNLVQLHG 394
           +G GGFG V    M + G   A K++       ++G +  + E   + ++  R +V L  
Sbjct: 1   LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAY 60

Query: 395 WCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQ 454
             + + +L LV   +  G L   +++ D +           +     AQ +  L     +
Sbjct: 61  AFQTKTDLCLVMTIMNGGDLRYHIYNVDEENPGF----PEPRACFYTAQIISGLEHLHQR 116

Query: 455 RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKAT 514
           R+++RD+KP N+LLD   N ++ D GLA   + G + +T    GT G++APEL +  +  
Sbjct: 117 RIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQS-KTKGYAGTPGFMAPELLQGEEYD 175

Query: 515 TSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYYDLA 574
            S D ++ G+ + E+   R    P +A  E +    +K+  L   +T     +       
Sbjct: 176 FSVDYFALGVTLYEMIAAR---GPFRARGEKVENKELKQRILNDSVTYPDKFSPASKSFC 232

Query: 575 EAEL 578
           EA L
Sbjct: 233 EALL 236

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score = 70.2 bits (172), Expect = 3e-13
 Identities = 46/147 (31%), Positives = 74/147 (50%), Gaps = 12/147 (8%)

Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIG-IAQSLLY 447
           LV LH   +   +L L+ DYV  G L   L+ ++H        +   ++ I  I  +L +
Sbjct: 67  LVTLHYAFQTDTKLHLILDYVNGGELFTHLYQREH------FTESEVRVYIAEIVLALDH 120

Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
           LH+     +++RD+K  NILLD+  +  L DFGL+K +      +     GT+ Y+APE+
Sbjct: 121 LHQ---LGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEEEERAYSFCGTIEYMAPEV 177

Query: 508 TRTGKA--TTSTDVYSYGILMLEVACG 532
            R G      + D +S G+L  E+  G
Sbjct: 178 IRGGSGGHDKAVDWWSLGVLTFELLTG 204

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

 Score = 70.9 bits (174), Expect = 3e-13
 Identities = 67/231 (29%), Positives = 113/231 (48%), Gaps = 35/231 (15%)

Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGH--NSQQGMKEFVAEIMSMGRLRHRNLVQLHGW 395
           +G G +G V          +VAIK+I +  +++   K  + EI  +  L H N++ +   
Sbjct: 13  IGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDI 72

Query: 396 ----CRKQ-DELLLVYDYVPNGSLDKLLFDKD-HKLRK---LLTWDQRYKILIGIAQSLL 446
                R+  +++ +VY+          L D D H++ +    L+ D     L  + + L 
Sbjct: 73  MPPPHREAFNDVYIVYE----------LMDTDLHQIIRSSQTLSDDHCQYFLYQLLRGLK 122

Query: 447 YLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPE 506
           Y+H   +  V+HRD+KPSN+LL+   + K+ DFGLA+      +  T ++V T  Y APE
Sbjct: 123 YIH---SANVLHRDLKPSNLLLNANCDLKICDFGLARTTSEKGDFMTEYVV-TRWYRAPE 178

Query: 507 -LTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHL 556
            L    + TT+ DV+S G +  E+  GR+ + P K        D+V +L L
Sbjct: 179 LLLNCSEYTTAIDVWSVGCIFAELL-GRKPLFPGK--------DYVHQLKL 220

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337

>gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

 Score = 70.7 bits (173), Expect = 4e-13
 Identities = 64/204 (31%), Positives = 92/204 (45%), Gaps = 20/204 (9%)

Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRN-------LV 390
           +G G FG+VY+          A+K +        KE VA  +    +  R        +V
Sbjct: 1   IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKE-VAHTIGERNILVRTLLDESPFIV 59

Query: 391 QLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIG-IAQSLLYLH 449
            L    +   +L LV DY+  G L   L  K+ +       + R K  I  +  +L +LH
Sbjct: 60  GLKFSFQTDSDLYLVTDYMSGGELFWHL-QKEGRFS-----EDRAKFYIAELVLALEHLH 113

Query: 450 EECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTR 509
           +     +V+RD+KP NILLD   +  L DFGL+K      N  T    GT  YLAPE+  
Sbjct: 114 K---YDIVYRDLKPENILLDATGHIALCDFGLSKA-NLTDNKTTNTFCGTTEYLAPEVLL 169

Query: 510 TGKA-TTSTDVYSYGILMLEVACG 532
             K  T   D +S G+L+ E+ CG
Sbjct: 170 DEKGYTKHVDFWSLGVLVFEMCCG 193

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330

>gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

 Score = 70.2 bits (172), Expect = 4e-13
 Identities = 56/201 (27%), Positives = 100/201 (49%), Gaps = 14/201 (6%)

Query: 337 LVGSGGFGRVY--RGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMS---MGRLRHRNLVQ 391
           ++G G FG+V+  R +      ++   ++   +   +++ V   M    +  + H  +V+
Sbjct: 3   VLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVK 62

Query: 392 LHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEE 451
           LH   + + +L L+ D++  G L    F +  K   + T +     L  +A +L +LH  
Sbjct: 63  LHYAFQTEGKLYLILDFLRGGDL----FTRLSK-EVMFTEEDVKFYLAELALALDHLH-- 115

Query: 452 CNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTG 511
            +  +++RD+KP NILLD   + KL DFGL+K        +     GT+ Y+APE+    
Sbjct: 116 -SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEK-KAYSFCGTVEYMAPEVVNRR 173

Query: 512 KATTSTDVYSYGILMLEVACG 532
             T S D +S+G+LM E+  G
Sbjct: 174 GHTQSADWWSFGVLMFEMLTG 194

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318

>gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

 Score = 69.6 bits (170), Expect = 5e-13
 Identities = 58/216 (26%), Positives = 104/216 (48%), Gaps = 13/216 (6%)

Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVA--EIMSMGRLRHRNLVQLHGW 395
           +G G +  VY+G+    G  VA+K I   +++G+  F A  E   +  L+H N+V LH  
Sbjct: 13  LGEGSYATVYKGISRINGQLVALKVISMKTEEGVP-FTAIREASLLKGLKHANIVLLHDI 71

Query: 396 CRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQR 455
              ++ L  V++Y+ +  L + +      L         +++L G+A    Y+H    Q 
Sbjct: 72  IHTKETLTFVFEYM-HTDLAQYMIQHPGGLHPYNVRLFMFQLLRGLA----YIH---GQH 123

Query: 456 VVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPE-LTRTGKAT 514
           ++HRD+KP N+L+      KL DFGLA+     +   ++ +V TL Y  P+ L      +
Sbjct: 124 ILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQTYSSEVV-TLWYRPPDVLLGATDYS 182

Query: 515 TSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDW 550
           ++ D++  G + +E+  G+ +        E L   W
Sbjct: 183 SALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIW 218

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291

>gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

 Score = 68.7 bits (168), Expect = 6e-13
 Identities = 61/227 (26%), Positives = 104/227 (45%), Gaps = 35/227 (15%)

Query: 321 KYAELASVTKG-FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIG--HNSQQGMKEFVAE 377
           KY ++  + +G FG+  LV S   G+ Y            IK I     S +  +E   E
Sbjct: 1   KYVKVKKIGEGSFGKAILVKSKEDGKQY-----------VIKEINISKMSPKEREESRKE 49

Query: 378 IMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSLDK-------LLFDKDHKLRKLLT 430
           +  +  ++H N+VQ      +   L +V DY   G L K       +LF +D    ++L 
Sbjct: 50  VAVLSNMKHPNIVQYQESFEENGNLYIVMDYCEGGDLYKKINAQRGVLFPED----QILD 105

Query: 431 WDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGAN 490
           W       + I  +L ++H+   ++++HRD+K  NI L      KLGDFG+A++      
Sbjct: 106 W------FVQICLALKHVHD---RKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVE 156

Query: 491 PQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIE 537
              T I GT  YL+PE+         +D+++ G ++ E+   + + E
Sbjct: 157 LARTCI-GTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFE 202

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256

>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

 Score = 70.1 bits (172), Expect = 6e-13
 Identities = 59/199 (29%), Positives = 96/199 (48%), Gaps = 17/199 (8%)

Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMS----MGRLRHRNLVQLH 393
           VG GG+G+V+       G  VA+KR+  +    + E V  +++    +   +   LV+L 
Sbjct: 9   VGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNE-VRHVLTERDILTTTKSEWLVKLL 67

Query: 394 GWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECN 453
              +  + L L  +YVP G    LL +       +L+ D     +  + +++  LHE   
Sbjct: 68  YAFQDDEYLYLAMEYVPGGDFRTLLNNL-----GVLSEDHARFYMAEMFEAVDALHE--- 119

Query: 454 QRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKA 513
              +HRD+KP N L+D   + KL DFGL+K     AN     +VG+  Y+APE+ R    
Sbjct: 120 LGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVTYANS----VVGSPDYMAPEVLRGKGY 175

Query: 514 TTSTDVYSYGILMLEVACG 532
             + D +S G ++ E  CG
Sbjct: 176 DFTVDYWSLGCMLYEFLCG 194

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333

>gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

 Score = 69.2 bits (169), Expect = 7e-13
 Identities = 57/218 (26%), Positives = 105/218 (48%), Gaps = 29/218 (13%)

Query: 338 VGSGGFGRVYRGLMPSL-GL----EVAIKRIGHNSQQG-MKEFVAEIMSMGRLRHRNLVQ 391
           +G G FG+V +     L G      VA+K +  N+    +++ ++E   + ++ H ++++
Sbjct: 8   LGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIK 67

Query: 392 LHGWCRKQDELLLVYDYVPNGSLDKLL------------FDKDHKLRKLLTWDQR---YK 436
           L+G C +   LLL+ +Y   GSL   L             D +     L   D+R     
Sbjct: 68  LYGACSQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMG 127

Query: 437 ILIG----IAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IYEHGANP 491
            LI     I++ + YL E    ++VHRD+   N+L+      K+ DFGL++ +YE  +  
Sbjct: 128 DLISFAWQISRGMQYLAE---MKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDSYV 184

Query: 492 QTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEV 529
           + +     + ++A E       TT +DV+S+G+L+ E+
Sbjct: 185 KRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEI 222

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290

>gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

 Score = 69.3 bits (170), Expect = 8e-13
 Identities = 41/103 (39%), Positives = 57/103 (55%), Gaps = 10/103 (9%)

Query: 436 KILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLA-KIYEHGANPQTT 494
           K+ + I ++L YL E     V+HRDVKPSNILLD   N KL DFG++ ++ +  A    T
Sbjct: 118 KMTVAIVKALHYLKE--KHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSKAK---T 172

Query: 495 HIVGTLGYLAPEL----TRTGKATTSTDVYSYGILMLEVACGR 533
              G   Y+APE         K     DV+S GI ++E+A G+
Sbjct: 173 RSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQ 215

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296

>gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

 Score = 69.3 bits (170), Expect = 8e-13
 Identities = 64/211 (30%), Positives = 100/211 (47%), Gaps = 39/211 (18%)

Query: 339 GSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVA--EIMSMGRLRHRNLVQLHGWC 396
           G G +  VY+G     G  VA+K I    ++G   F A  E   +  L+H N+V LH   
Sbjct: 14  GEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAP-FTAIREASLLKDLKHANIVTLHDII 72

Query: 397 RKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQR-----------YKILIGIAQSL 445
             +  L LV++Y+          D D  L++ +                +++L G+A   
Sbjct: 73  HTKKTLTLVFEYL----------DTD--LKQYMDDCGGGLSMHNVRLFLFQLLRGLA--- 117

Query: 446 LYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTT--HIVGTLGYL 503
            Y H+   +RV+HRD+KP N+L+      KL DFGLA+     + P  T  + V TL Y 
Sbjct: 118 -YCHQ---RRVLHRDLKPQNLLISERGELKLADFGLARA---KSVPSKTYSNEVVTLWYR 170

Query: 504 APE-LTRTGKATTSTDVYSYGILMLEVACGR 533
            P+ L  + + +TS D++  G +  E+A GR
Sbjct: 171 PPDVLLGSTEYSTSLDMWGVGCIFYEMATGR 201

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291

>gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

 Score = 69.7 bits (171), Expect = 8e-13
 Identities = 60/217 (27%), Positives = 100/217 (46%), Gaps = 28/217 (12%)

Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQ--QGMKEFVAEIMSMGRLRHRNLVQLHGW 395
           +GSG +G V   +    G +VAIK+I H        K  + E+  +   +H N++ +   
Sbjct: 13  IGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDI 72

Query: 396 CRKQDELL----LVYDYVPNGSLDKLLFDK----DHKLRKLLTWDQRYKILIGIAQSLLY 447
            R          +V D + +  L  ++       +  +R  L     Y++L G    L Y
Sbjct: 73  LRPPGADFKDVYVVMDLMES-DLHHIIHSDQPLTEEHIRYFL-----YQLLRG----LKY 122

Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHI---VGTLGYLA 504
           +H      V+HRD+KPSN+L++     ++GDFG+A+            +   V T  Y A
Sbjct: 123 IHSAN---VIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPTEHKYFMTEYVATRWYRA 179

Query: 505 PELTRT-GKATTSTDVYSYGILMLEVACGRRSIEPQK 540
           PEL  +  + TT+ D++S G +  E+  GRR + P K
Sbjct: 180 PELLLSLPEYTTAIDMWSVGCIFAEM-LGRRQLFPGK 215

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334

>gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

 Score = 69.7 bits (170), Expect = 8e-13
 Identities = 52/150 (34%), Positives = 77/150 (51%), Gaps = 13/150 (8%)

Query: 386 HRNLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSL 445
           H  LV LH   + +  L  V +YV  G L   +F    + RKL     R+     I+ +L
Sbjct: 55  HPFLVGLHSCFQTESRLFFVIEYVNGGDL---MFHMQRQ-RKLPEEHARF-YSAEISLAL 109

Query: 446 LYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANP--QTTHIVGTLGYL 503
            YLHE   + +++RD+K  N+LLD+  + KL D+G+ K    G  P   T+   GT  Y+
Sbjct: 110 NYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCK---EGLRPGDTTSTFCGTPNYI 163

Query: 504 APELTRTGKATTSTDVYSYGILMLEVACGR 533
           APE+ R      S D ++ G+LM E+  GR
Sbjct: 164 APEILRGEDYGFSVDWWALGVLMFEMMAGR 193

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329

>gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

 Score = 69.5 bits (170), Expect = 9e-13
 Identities = 67/219 (30%), Positives = 100/219 (45%), Gaps = 28/219 (12%)

Query: 330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVA------EIMSMGR 383
           K F  ++LVG G FG V      + G   A+K +   S    +E V+      +I+S+  
Sbjct: 1   KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVM-KKSVLLAQETVSFFEEERDILSI-- 57

Query: 384 LRHRN---LVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIG 440
               N   + QL    + +D L LV +Y P G L  LL   + +  + +   Q Y     
Sbjct: 58  ---SNSPWIPQLQYAFQDKDNLYLVMEYQPGGDLLSLLNRYEDQFDEDMA--QFY----- 107

Query: 441 IAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTL 500
           +A+ +L +H       VHRD+KP N+L+D   + KL DFG A          +   VGT 
Sbjct: 108 LAELVLAIHSVHQMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKMVNSKLPVGTP 167

Query: 501 GYLAPELTRT----GKAT--TSTDVYSYGILMLEVACGR 533
            Y+APE+  T    GK T     D +S G++  E+  GR
Sbjct: 168 DYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGR 206

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330

>gnl|CDD|133174 cd05042, PTKc_Aatyk, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

 Score = 68.8 bits (168), Expect = 1e-12
 Identities = 54/204 (26%), Positives = 90/204 (44%), Gaps = 16/204 (7%)

Query: 338 VGSGGFGRVYRGLMPSL--GLEVAIKRIGHNSQ-QGMKEFVAEIMSMGRLRHRNLVQLHG 394
           +G+G FG+V  G          V +K +  ++       F+ E+     L H N++Q  G
Sbjct: 3   IGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLG 62

Query: 395 WCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQ 454
            C +    LLV ++ P G L   L      + ++   D   ++   +A  LL+LH+    
Sbjct: 63  QCIESIPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQ---A 119

Query: 455 RVVHRDVKPSNILLDTYLNAKLGDFGLA--KIYEHGANPQTTHIVGTLGYLAPELT---- 508
             +H D+   N  L   L+ K+GD+GLA  +  E     +  H V  L +LAPEL     
Sbjct: 120 DFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYITKDCHAV-PLRWLAPELVEIRG 178

Query: 509 ---RTGKATTSTDVYSYGILMLEV 529
                   T  ++++S G+ M E+
Sbjct: 179 QDLLPKDQTKKSNIWSLGVTMWEL 202

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kinases based on overall sequence similarity and the phylogenetic tree. However, analysis of catalytic residues suggests that Aatyk proteins may be multispecific kinases, functioning also as serine/threonine kinases. They are involved in neural differentiation, nerve growth factor (NGF) signaling, apoptosis, and spermatogenesis. Length = 269

>gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes

 Score = 68.1 bits (166), Expect = 1e-12
 Identities = 49/193 (25%), Positives = 92/193 (47%), Gaps = 9/193 (4%)

Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMK-EFVAEIMSMGRLRHRNLVQLHGWC 396
           +G G FG V+ G + +    VA+K         +K +F+ E   + +  H N+V+L G C
Sbjct: 3   IGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 62

Query: 397 RKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRV 456
            ++  + +V + V  G     L  +  +L+      +  +++   A  + YL  +     
Sbjct: 63  TQKQPIYIVMELVQGGDFLTFLRTEGPRLKV----KELIQMVENAAAGMEYLESKH---C 115

Query: 457 VHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGT-LGYLAPELTRTGKATT 515
           +HRD+   N L+      K+ DFG+++  E G    T  +    + + APE    G+ ++
Sbjct: 116 IHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQIPVKWTAPEALNYGRYSS 175

Query: 516 STDVYSYGILMLE 528
            +DV+S+GIL+ E
Sbjct: 176 ESDVWSFGILLWE 188

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252

>gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases

 Score = 68.3 bits (167), Expect = 1e-12
 Identities = 53/207 (25%), Positives = 100/207 (48%), Gaps = 16/207 (7%)

Query: 337 LVGSGGFGRVYRGLMP---SLGLEVAIK--RIGHNSQQGMKEFVAEIMSMGRLRHRNLVQ 391
           ++G G FG V  G +       L+VA+K  ++  ++   ++EF++E   M    H N+++
Sbjct: 6   ILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMK 65

Query: 392 LHGWCRKQDEL------LLVYDYVPNGSLDK-LLFDKDHKLRKLLTWDQRYKILIGIAQS 444
           L G C +   L      +++  ++ +G L   LL+ +   L + L      K ++ IA  
Sbjct: 66  LIGVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALG 125

Query: 445 LLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGT-LGYL 503
           + YL    N+  +HRD+   N +L   +   + DFGL+K    G   +   I    + ++
Sbjct: 126 MEYL---SNRNFIHRDLAARNCMLREDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWI 182

Query: 504 APELTRTGKATTSTDVYSYGILMLEVA 530
           A E       T+ +DV+++G+ M E+A
Sbjct: 183 AIESLADRVYTSKSDVWAFGVTMWEIA 209

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273

>gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

 Score = 68.9 bits (168), Expect = 1e-12
 Identities = 64/202 (31%), Positives = 100/202 (49%), Gaps = 17/202 (8%)

Query: 337 LVGSGGFGRVYRGLMPSLG----LEVAIKRIGHNSQQGMKEFVAEI-MSMGRLRHRNLVQ 391
           ++G G FG+V        G    ++V  K+I  N ++  K  +AE  + +  ++H  LV 
Sbjct: 2   VIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKE-QKHIMAERNVLLKNVKHPFLVG 60

Query: 392 LHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIG-IAQSLLYLHE 450
           LH   +  ++L  V D+V  G   +L F   H  R+    + R +     IA +L YLH 
Sbjct: 61  LHYSFQTTEKLYFVLDFVNGG---ELFF---HLQRERSFPEPRARFYAAEIASALGYLH- 113

Query: 451 ECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRT 510
             +  +V+RD+KP NILLD+  +  L DFGL K     ++  TT   GT  YLAPE+ R 
Sbjct: 114 --SINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTTTT-FCGTPEYLAPEVIRK 170

Query: 511 GKATTSTDVYSYGILMLEVACG 532
                + D +  G ++ E+  G
Sbjct: 171 QPYDNTVDWWCLGAVLYEMLYG 192

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325

>gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

 Score = 68.8 bits (168), Expect = 2e-12
 Identities = 50/149 (33%), Positives = 77/149 (51%), Gaps = 17/149 (11%)

Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIG-IAQSLLY 447
           LV LH   + + +L L+ DYV  G +   L+ +D+        +   +   G I  +L +
Sbjct: 67  LVTLHYAFQTEAKLHLILDYVSGGEMFTHLYQRDN------FSEDEVRFYSGEIILALEH 120

Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
           LH+     +V+RD+K  NILLD+  +  L DFGL+K +      +T    GT+ Y+APE+
Sbjct: 121 LHK---LGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEEKERTYSFCGTIEYMAPEI 177

Query: 508 TRT----GKATTSTDVYSYGILMLEVACG 532
            R     GKA    D +S GIL+ E+  G
Sbjct: 178 IRGKGGHGKA---VDWWSLGILIFELLTG 203

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332

>gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

 Score = 68.1 bits (166), Expect = 2e-12
 Identities = 53/215 (24%), Positives = 106/215 (49%), Gaps = 28/215 (13%)

Query: 338 VGSGGFGRVYRGLMPSLGLE---------VAIKRIGHN-SQQGMKEFVAEIMSMGRL-RH 386
           +G G FG+V   +  +LG++         VA+K +  + +++ + + V+E+  M  + +H
Sbjct: 23  LGEGCFGQVV--MAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 80

Query: 387 RNLVQLHGWCRKQDELLLVYDYVPNGSLDKLL-----------FDKDHKLRKLLTWDQRY 435
           +N++ L G C +   L ++ +Y   G+L + L           +D      + +T+    
Sbjct: 81  KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLV 140

Query: 436 KILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IYEHGANPQTT 494
                +A+ + YL    +Q+ +HRD+   N+L+      K+ DFGLA+ +       +TT
Sbjct: 141 SCTYQVARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDVNNIDYYKKTT 197

Query: 495 HIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEV 529
           +    + ++APE       T  +DV+S+G+LM E+
Sbjct: 198 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 232

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304

>gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

 Score = 68.1 bits (166), Expect = 2e-12
 Identities = 57/213 (26%), Positives = 99/213 (46%), Gaps = 11/213 (5%)

Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMK-EFVAEIMSMGRLRHRNLVQLHGWC 396
           +G G +  V++G        VA+K I    ++G     + E+  +  L+H N+V LH   
Sbjct: 13  LGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDII 72

Query: 397 RKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRV 456
             +  L LV++Y     LD  L         L++       +  + + L Y H+   +++
Sbjct: 73  HTERCLTLVFEY-----LDSDLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHK---RKI 124

Query: 457 VHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPE-LTRTGKATT 515
           +HRD+KP N+L++     KL DFGLA+         +  +V TL Y  P+ L  + + +T
Sbjct: 125 LHRDLKPQNLLINEKGELKLADFGLARAKSVPTKTYSNEVV-TLWYRPPDVLLGSTEYST 183

Query: 516 STDVYSYGILMLEVACGRRSIEPQKAAAELLLV 548
             D++  G ++ E+A GR          EL L+
Sbjct: 184 PIDMWGVGCILYEMATGRPMFPGSTVKEELHLI 216

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288

>gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl

 Score = 67.4 bits (164), Expect = 2e-12
 Identities = 56/205 (27%), Positives = 100/205 (48%), Gaps = 15/205 (7%)

Query: 338 VGSGGFGRVYRGLMPSLG--LEVAIK--RIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLH 393
           +G G FG V  G +      L+VA+K  +I   ++  M++F++E + M    H N+++L 
Sbjct: 7   LGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLI 66

Query: 394 GWCRKQDEL------LLVYDYVPNGSLDK-LLFDKDHKLRKLLTWDQRYKILIGIAQSLL 446
           G C +  E       +++  ++ +G L   LL+ +     + L      K +  IA  + 
Sbjct: 67  GVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGME 126

Query: 447 YLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLA-KIYEHGANPQTTHIVGTLGYLAP 505
           YL    ++  +HRD+   N +L+  +N  + DFGL+ KIY      Q       + ++A 
Sbjct: 127 YL---SSKSFIHRDLAARNCMLNENMNVCVADFGLSKKIYNGDYYRQGRIAKMPVKWIAI 183

Query: 506 ELTRTGKATTSTDVYSYGILMLEVA 530
           E       TT +DV+S+G+ M E+A
Sbjct: 184 ESLADRVYTTKSDVWSFGVTMWEIA 208

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272

>gnl|CDD|183880 PRK13184, pknD, serine/threonine-protein kinase; Reviewed

 Score = 69.8 bits (171), Expect = 3e-12
 Identities = 59/217 (27%), Positives = 91/217 (41%), Gaps = 31/217 (14%)

Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQG---MKEFVAEIMSMGRLRHRNLVQLH 393
           L+G GG G VY    P     VA+K+I  +  +     K F+ E      L H  +V ++
Sbjct: 9   LIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVY 68

Query: 394 GWCRKQDELLLVYDYVPNGSLDKLL---FDKDHKLRKLLTWDQRYK----ILIGIAQSLL 446
             C   D +     Y+   +L  LL   + K+  L K L           I   I  ++ 
Sbjct: 69  SICSDGDPVYYTMPYIEGYTLKSLLKSVWQKE-SLSKELAEKTSVGAFLSIFHKICATIE 127

Query: 447 YLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTT------------ 494
           Y+H   ++ V+HRD+KP NILL  +    + D+G A   +                    
Sbjct: 128 YVH---SKGVLHRDLKPDNILLGLFGEVVILDWGAAIFKKLEEEDLLDIDVDERNICYSS 184

Query: 495 -----HIVGTLGYLAPELTRTGKATTSTDVYSYGILM 526
                 IVGT  Y+APE      A+ STD+Y+ G+++
Sbjct: 185 MTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVIL 221

Length = 932

>gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

 Score = 67.3 bits (164), Expect = 3e-12
 Identities = 62/209 (29%), Positives = 104/209 (49%), Gaps = 22/209 (10%)

Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRL-RHRNLVQLHGW 395
           +VG+G +G+VY+G     G   AIK +   ++   +E   EI  + +   HRN+   +G 
Sbjct: 23  VVGNGTYGQVYKGRHVKTGQLAAIK-VMDVTEDEEEEIKLEINMLKKYSHHRNIATYYGA 81

Query: 396 CRKQ------DELLLVYDYVPNGSLDKLLFD-KDHKLRKLLTWDQRYKILIGIAQSLLYL 448
             K+      D+L LV ++   GS+  L+ + K + L++    D    I   I + L +L
Sbjct: 82  FIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKE----DWIAYICREILRGLAHL 137

Query: 449 HEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELT 508
           H     +V+HRD+K  N+LL      KL DFG++   +     + T I GT  ++APE+ 
Sbjct: 138 HA---HKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFI-GTPYWMAPEVI 193

Query: 509 RTGKATTST-----DVYSYGILMLEVACG 532
              +   +T     D++S GI  +E+A G
Sbjct: 194 ACDENPDATYDYRSDIWSLGITAIEMAEG 222

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282

>gnl|CDD|133240 cd05109, PTKc_HER2, Catalytic domain of the Protein Tyrosine Kinase, HER2

 Score = 67.3 bits (164), Expect = 3e-12
 Identities = 62/205 (30%), Positives = 102/205 (49%), Gaps = 26/205 (12%)

Query: 337 LVGSGGFGRVYRGLMPSLG----LEVAIKRIGHN-SQQGMKEFVAEIMSMGRLRHRNLVQ 391
           ++GSG FG VY+G+    G    + VAIK +  N S +  KE + E   M  +    + +
Sbjct: 14  VLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCR 73

Query: 392 LHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLR----KLLTWDQRYKILIGIAQSLLY 447
           L G C     + LV   +P G L  L + +++K R     LL W       + IA+ + Y
Sbjct: 74  LLGICLTS-TVQLVTQLMPYGCL--LDYVRENKDRIGSQDLLNW------CVQIAKGMSY 124

Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVG---TLGYLA 504
           L E    R+VHRD+   N+L+ +  + K+ DFGLA++ +   +    H  G    + ++A
Sbjct: 125 LEE---VRLVHRDLAARNVLVKSPNHVKITDFGLARLLD--IDETEYHADGGKVPIKWMA 179

Query: 505 PELTRTGKATTSTDVYSYGILMLEV 529
            E     + T  +DV+SYG+ + E+
Sbjct: 180 LESILHRRFTHQSDVWSYGVTVWEL 204

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER2 does not bind to any known EGFR subfamily ligands, but contributes to the kinase activity of all possible heterodimers. It acts as the preferred partner with other ligand-bound EGFR proteins and functions as a signal amplifier, with the HER2-HER3 heterodimer being the most potent pair in mitogenic signaling. HER2 plays an important role in cell development, proliferation, survival and motility. Overexpression of HER2 results in its activation and downstream signaling, even in the absence of ligand. HER2 overexpression, mainly due to gene amplification, has been shown in a variety of human cancers. Its role in breast cancer is especially well-documented. HER2 is up-regulated in about 25% of breast tumors and is associated with increases in tumor aggressiveness, recurrence and mortality. HER2 is a target for monoclonal antibodies and small molecule inhibitors, which are being developed as treatments for cancer. The first humanized antibody approved for clinical use is Trastuzumab (Herceptin), which is being used in combination with other therapies to improve the survival rates of patients with HER2-overexpressing breast cancer. Length = 279

>gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

 Score = 67.3 bits (164), Expect = 3e-12
 Identities = 46/147 (31%), Positives = 74/147 (50%), Gaps = 12/147 (8%)

Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIG-IAQSLLY 447
           LV LH   +   +L L+ DY+  G L        H  ++    +Q  +I  G I  +L +
Sbjct: 67  LVTLHYAFQTDTKLHLILDYINGGEL------FTHLSQRERFKEQEVQIYSGEIVLALEH 120

Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
           LH+     +++RD+K  NILLD+  +  L DFGL+K +      +     GT+ Y+AP++
Sbjct: 121 LHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDEVERAYSFCGTIEYMAPDI 177

Query: 508 TRTGKA--TTSTDVYSYGILMLEVACG 532
            R G      + D +S G+LM E+  G
Sbjct: 178 VRGGDGGHDKAVDWWSMGVLMYELLTG 204

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290

>gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

 Score = 67.9 bits (166), Expect = 3e-12
 Identities = 51/162 (31%), Positives = 80/162 (49%), Gaps = 14/162 (8%)

Query: 378 IMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKI 437
           I+++   +H  L  LH   + +D L  V +YV  G L   +F +  + RK      R+  
Sbjct: 48  ILALAA-KHPFLTALHCCFQTKDRLFFVMEYVNGGDL---MF-QIQRSRKFDEPRSRF-Y 101

Query: 438 LIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANP--QTTH 495
              +  +L++LH      V++RD+K  NILLD   + KL DFG+ K    G      TT 
Sbjct: 102 AAEVTLALMFLHR---HGVIYRDLKLDNILLDAEGHCKLADFGMCK---EGILNGVTTTT 155

Query: 496 IVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIE 537
             GT  Y+APE+ +  +   S D ++ G+LM E+  G+   E
Sbjct: 156 FCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFE 197

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321

>gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

 Score = 67.2 bits (164), Expect = 3e-12
 Identities = 60/216 (27%), Positives = 99/216 (45%), Gaps = 19/216 (8%)

Query: 332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMG------RLR 385
           F    ++G GGFG V    + + G   A K++    ++ +K+   E M++       ++ 
Sbjct: 2   FRHYRVLGKGGFGEVCACQVRATGKMYACKKL---EKKRIKKRKGEAMALNEKQILEKVN 58

Query: 386 HRNLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSL 445
            R +V L      +D L LV   +  G L      K H            + +   A+  
Sbjct: 59  SRFVVSLAYAYETKDALCLVLTLMNGGDL------KFHIYNMGNPGFDEERAVFYAAEIT 112

Query: 446 LYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLA-KIYEHGANPQTTHIVGTLGYLA 504
             L +   +R+V+RD+KP NILLD Y + ++ D GLA +I E          VGT+GY+A
Sbjct: 113 CGLEDLHRERIVYRDLKPENILLDDYGHIRISDLGLAVEIPE---GETIRGRVGTVGYMA 169

Query: 505 PELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQK 540
           PE+ +  + T S D +  G L+ E+  G+     +K
Sbjct: 170 PEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRK 205

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285

>gnl|CDD|173333 PTZ00036, PTZ00036, glycogen synthase kinase; Provisional

 Score = 68.5 bits (167), Expect = 4e-12
 Identities = 64/234 (27%), Positives = 111/234 (47%), Gaps = 25/234 (10%)

Query: 327 SVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRH 386
           S  K +   N++G+G FG VY  +      +VAIK++  + Q   +    E++ M  L H
Sbjct: 63  SPNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDPQYKNR----ELLIMKNLNH 118

Query: 387 RNLVQLHGW----CRKQDE----LLLVYDYVPNG--SLDKLLFDKDHKLRKLLTWDQRYK 436
            N++ L  +    C K++E    L +V +++P       K     +H L   L     Y+
Sbjct: 119 INIIFLKDYYYTECFKKNEKNIFLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQ 178

Query: 437 ILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNA-KLGDFGLAKIYEHGANPQTTH 495
               + ++L Y+H   ++ + HRD+KP N+L+D   +  KL DFG AK    G   ++  
Sbjct: 179 ----LCRALAYIH---SKFICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLLAGQ--RSVS 229

Query: 496 IVGTLGYLAPELTR-TGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLV 548
            + +  Y APEL       TT  D++S G ++ E+  G      Q +  +L+ +
Sbjct: 230 YICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRI 283

Length = 440

>gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

 Score = 67.3 bits (164), Expect = 4e-12
 Identities = 57/224 (25%), Positives = 107/224 (47%), Gaps = 29/224 (12%)

Query: 332 FGEQNLV-----GSGGFGRVYRGLM-------PSLGLEVAIKRIGHN-SQQGMKEFVAEI 378
           F    LV     G G FG+V R          P   + VA+K +  N + + + + ++E+
Sbjct: 9   FPRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEM 68

Query: 379 MSMGRL-RHRNLVQLHGWCRKQDELLLVYDYVPNGSLDKLL-----------FDKDHKLR 426
             M  + +H+N++ L G C ++  L ++ +Y   G+L + L           FD      
Sbjct: 69  ELMKLIGKHKNIINLLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPE 128

Query: 427 KLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IY 485
           + L++         +A+ + YL    ++R +HRD+   N+L+      K+ DFGLA+ ++
Sbjct: 129 EQLSFKDLVSCAYQVARGMEYLE---SRRCIHRDLAARNVLVTEDNVMKIADFGLARGVH 185

Query: 486 EHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEV 529
           +     +T++    + ++APE       T  +DV+S+GILM E+
Sbjct: 186 DIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEI 229

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314

>gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

 Score = 66.7 bits (162), Expect = 4e-12
 Identities = 63/209 (30%), Positives = 104/209 (49%), Gaps = 22/209 (10%)

Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRL-RHRNLVQLHGW 395
           LVG+G +G+VY+G     G   AIK +     +  +E   EI  + +   HRN+   +G 
Sbjct: 13  LVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDE-EEEIKQEINMLKKYSHHRNIATYYGA 71

Query: 396 CRKQ------DELLLVYDYVPNGSLDKLLFD-KDHKLRKLLTWDQRYKILIGIAQSLLYL 448
             K+      D+L LV ++   GS+  L+ + K + L++   W     I   I + L +L
Sbjct: 72  FIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKE--EWIAY--ICREILRGLSHL 127

Query: 449 HEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELT 508
           H+    +V+HRD+K  N+LL      KL DFG++   +     + T I GT  ++APE+ 
Sbjct: 128 HQ---HKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFI-GTPYWMAPEVI 183

Query: 509 RTGKATTST-----DVYSYGILMLEVACG 532
              +   +T     D++S GI  +E+A G
Sbjct: 184 ACDENPDATYDFKSDLWSLGITAIEMAEG 212

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272

>gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

 Score = 67.7 bits (165), Expect = 4e-12
 Identities = 58/214 (27%), Positives = 99/214 (46%), Gaps = 21/214 (9%)

Query: 327 SVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGH--NSQQGMKEFVAEIMSMGRL 384
           +V K + +   +GSG  G V       LG+ VA+K++     +Q   K    E++ +  +
Sbjct: 18  TVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCV 77

Query: 385 RHRNLVQLHGWCRKQ------DELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKIL 438
            H+N++ L      Q       ++ LV + +       +  + DH+    L     Y++L
Sbjct: 78  NHKNIISLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLL----YQML 133

Query: 439 IGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVG 498
            GI     +LH   +  ++HRD+KPSNI++ +    K+ DFGLA+      N   T  V 
Sbjct: 134 CGIK----HLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--ACTNFMMTPYVV 184

Query: 499 TLGYLAPELTRTGKATTSTDVYSYGILMLEVACG 532
           T  Y APE+        + D++S G +M E+  G
Sbjct: 185 TRYYRAPEVILGMGYKENVDIWSVGCIMGELVKG 218

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359

>gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

 Score = 67.4 bits (164), Expect = 5e-12
 Identities = 54/148 (36%), Positives = 76/148 (51%), Gaps = 15/148 (10%)

Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQR-YKILIGIAQSLLY 447
           LV LH   +    L LV +YV  G L   +F    + RKL     R Y   I IA  L +
Sbjct: 58  LVGLHSCFQTTSRLFLVIEYVNGGDL---MFHMQRQ-RKLPEEHARFYAAEICIA--LNF 111

Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANP--QTTHIVGTLGYLAP 505
           LHE   + +++RD+K  N+LLD   + KL D+G+ K    G  P   T+   GT  Y+AP
Sbjct: 112 LHE---RGIIYRDLKLDNVLLDADGHIKLTDYGMCK---EGLGPGDTTSTFCGTPNYIAP 165

Query: 506 ELTRTGKATTSTDVYSYGILMLEVACGR 533
           E+ R  +   S D ++ G+LM E+  GR
Sbjct: 166 EILRGEEYGFSVDWWALGVLMFEMMAGR 193

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327

>gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

 Score = 67.0 bits (163), Expect = 5e-12
 Identities = 66/203 (32%), Positives = 96/203 (47%), Gaps = 17/203 (8%)

Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRL----RHRNLVQL 392
           L+G G FG+V      + G   A+K I        K+ VA  ++  R+    RH  L  L
Sbjct: 2   LLGKGTFGKVILVKEKATGRYYAMK-ILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTAL 60

Query: 393 HGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKIL-IGIAQSLLYLHEE 451
               +  D L  V +Y   G   +L F   H  R+ +  + R +     I  +L YLH E
Sbjct: 61  KYSFQTHDRLCFVMEYANGG---ELFF---HLSRERVFSEDRARFYGAEIVSALDYLHSE 114

Query: 452 CNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKI-YEHGANPQTTHIVGTLGYLAPELTRT 510
            N  VV+RD+K  N++LD   + K+ DFGL K   + GA  +T    GT  YLAPE+   
Sbjct: 115 KN--VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT--FCGTPEYLAPEVLED 170

Query: 511 GKATTSTDVYSYGILMLEVACGR 533
                + D +  G++M E+ CGR
Sbjct: 171 NDYGRAVDWWGLGVVMYEMMCGR 193

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325

>gnl|CDD|173679 cd05588, STKc_aPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

 Score = 67.2 bits (164), Expect = 6e-12
 Identities = 52/151 (34%), Positives = 76/151 (50%), Gaps = 15/151 (9%)

Query: 386 HRNLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQR-YKILIGIAQS 444
           H  LV LH   + +  L  V ++V  G L   +F    + RKL     R Y   I +A  
Sbjct: 55  HPFLVGLHSCFQTESRLFFVIEFVSGGDL---MFHMQRQ-RKLPEEHARFYSAEISLA-- 108

Query: 445 LLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANP--QTTHIVGTLGY 502
           L +LHE   + +++RD+K  N+LLD   + KL D+G+ K    G  P   T+   GT  Y
Sbjct: 109 LNFLHE---RGIIYRDLKLDNVLLDAEGHIKLTDYGMCK---EGIRPGDTTSTFCGTPNY 162

Query: 503 LAPELTRTGKATTSTDVYSYGILMLEVACGR 533
           +APE+ R      S D ++ G+LM E+  GR
Sbjct: 163 IAPEILRGEDYGFSVDWWALGVLMFEMMAGR 193

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. Length = 329

>gnl|CDD|140293 PTZ00267, PTZ00267, NIMA-related protein kinase; Provisional

 Score = 68.1 bits (166), Expect = 6e-12
 Identities = 46/155 (29%), Positives = 83/155 (53%), Gaps = 5/155 (3%)

Query: 376 AEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRY 435
           +E+  +    H  +V+     +  D+LLL+ +Y   G L+K +     +L++ L + Q Y
Sbjct: 114 SELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYGSGGDLNKQI---KQRLKEHLPF-QEY 169

Query: 436 KILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQT-T 494
           ++ +   Q +L L E  +++++HRD+K +NI L      KLGDFG +K Y    +    +
Sbjct: 170 EVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSLDVAS 229

Query: 495 HIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEV 529
              GT  YLAPEL    + +   D++S G+++ E+
Sbjct: 230 SFCGTPYYLAPELWERKRYSKKADMWSLGVILYEL 264

Length = 478

>gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

 Score = 66.2 bits (161), Expect = 8e-12
 Identities = 61/219 (27%), Positives = 103/219 (47%), Gaps = 25/219 (11%)

Query: 332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMG------RLR 385
           F +  ++G GGFG V    + + G   A KR+    ++ +K+   E M++       ++ 
Sbjct: 2   FRQYRVLGKGGFGEVCACQVRATGKMYACKRL---EKKRIKKRKGESMALNEKQILEKVN 58

Query: 386 HRNLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSL 445
            + +V L      +D L LV   +  G L   +++  +         +  + L   A+ L
Sbjct: 59  SQFVVNLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNP------GFEEERALFYAAEIL 112

Query: 446 LYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLA-KIYEHGANPQTTHI---VGTLG 501
             L +   +  V+RD+KP NILLD Y + ++ D GLA KI      P+   I   VGT+G
Sbjct: 113 CGLEDLHRENTVYRDLKPENILLDDYGHIRISDLGLAVKI------PEGESIRGRVGTVG 166

Query: 502 YLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQK 540
           Y+APE+    + T S D +  G L+ E+  G+     +K
Sbjct: 167 YMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRK 205

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285

>gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

 Score = 66.6 bits (162), Expect = 9e-12
 Identities = 65/202 (32%), Positives = 94/202 (46%), Gaps = 17/202 (8%)

Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMS-----MGRLRHRNLVQ 391
           ++G G FG+V      +     A+K +   +    KE    IMS     +  ++H  LV 
Sbjct: 2   VIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKE-EKHIMSERNVLLKNVKHPFLVG 60

Query: 392 LHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEE 451
           LH   +  D+L  V DY+  G L    F    + R  L    R+     IA +L YLH  
Sbjct: 61  LHFSFQTADKLYFVLDYINGGEL----FYHLQRERCFLEPRARF-YAAEIASALGYLH-- 113

Query: 452 CNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKI-YEHGANPQTTHIVGTLGYLAPELTRT 510
            +  +V+RD+KP NILLD+  +  L DFGL K   EH  N  T+   GT  YLAPE+   
Sbjct: 114 -SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEH--NGTTSTFCGTPEYLAPEVLHK 170

Query: 511 GKATTSTDVYSYGILMLEVACG 532
                + D +  G ++ E+  G
Sbjct: 171 QPYDRTVDWWCLGAVLYEMLYG 192

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325

>gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

 Score = 66.6 bits (162), Expect = 9e-12
 Identities = 64/203 (31%), Positives = 96/203 (47%), Gaps = 18/203 (8%)

Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRL----RHRNLVQL 392
           L+G G FG+V      + G   A+K I        K+ VA  ++  R+    RH  L  L
Sbjct: 2   LLGKGTFGKVILVREKATGRYYAMK-ILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 60

Query: 393 HGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKIL-IGIAQSLLYLHEE 451
               +  D L  V +Y   G   +L F   H  R+ +  ++R +     I  +L YLH  
Sbjct: 61  KYAFQTHDRLCFVMEYANGG---ELFF---HLSRERVFTEERARFYGAEIVSALEYLH-- 112

Query: 452 CNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKI-YEHGANPQTTHIVGTLGYLAPELTRT 510
            ++ VV+RD+K  N++LD   + K+ DFGL K     GA  +T    GT  YLAPE+   
Sbjct: 113 -SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT--FCGTPEYLAPEVLED 169

Query: 511 GKATTSTDVYSYGILMLEVACGR 533
                + D +  G++M E+ CGR
Sbjct: 170 NDYGRAVDWWGLGVVMYEMMCGR 192

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323

>gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

 Score = 65.4 bits (159), Expect = 1e-11
 Identities = 40/120 (33%), Positives = 60/120 (50%), Gaps = 8/120 (6%)

Query: 441 IAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTL 500
           I   +L+LH      +V+RD+KP N+LLD   N +L D GLA   + G     T   GT 
Sbjct: 104 ITCGILHLHS---MDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKT--ITQRAGTN 158

Query: 501 GYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEI 560
           GY+APE+ +    +   D ++ G  + E+  GR    P K   E +  + +K   LE E+
Sbjct: 159 GYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGR---TPFKDHKEKVAKEELKRRTLEDEV 215

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277

>gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

 Score = 66.0 bits (161), Expect = 1e-11
 Identities = 60/205 (29%), Positives = 98/205 (47%), Gaps = 20/205 (9%)

Query: 337 LVGSGGFGRVYRGLMPS-------LGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNL 389
           ++G GG+G+V++    +         ++V  K     +Q+      AE   +  ++H  +
Sbjct: 3   VLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFI 62

Query: 390 VQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLH 449
           V L    +   +L L+ +Y+  G L   L     +   +   D     L  I+ +L +LH
Sbjct: 63  VDLIYAFQTGGKLYLILEYLSGGELFMHL-----EREGIFMEDTACFYLSEISLALEHLH 117

Query: 450 EECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTH-IVGTLGYLAPE-L 507
           +   Q +++RD+KP NILLD   + KL DFGL K  E       TH   GT+ Y+APE L
Sbjct: 118 Q---QGIIYRDLKPENILLDAQGHVKLTDFGLCK--ESIHEGTVTHTFCGTIEYMAPEIL 172

Query: 508 TRTGKATTSTDVYSYGILMLEVACG 532
            R+G    + D +S G LM ++  G
Sbjct: 173 MRSGHG-KAVDWWSLGALMYDMLTG 196

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323

>gnl|CDD|173720 cd05631, STKc_GRK4, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

 Score = 65.4 bits (159), Expect = 1e-11
 Identities = 59/215 (27%), Positives = 101/215 (46%), Gaps = 17/215 (7%)

Query: 332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMG------RLR 385
           F    ++G GGFG V    + + G   A K++    ++ +K+   E M++       ++ 
Sbjct: 2   FRHYRVLGKGGFGEVCACQVRATGKMYACKKL---EKKRIKKRKGEAMALNEKRILEKVN 58

Query: 386 HRNLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSL 445
            R +V L      +D L LV   +  G L   +++  +       +D++  I    A+  
Sbjct: 59  SRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNP-----GFDEQRAIFYA-AELC 112

Query: 446 LYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAP 505
             L +   +R+V+RD+KP NILLD   + ++ D GLA     G   +    VGT+GY+AP
Sbjct: 113 CGLEDLQRERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGETVRGR--VGTVGYMAP 170

Query: 506 ELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQK 540
           E+    K T S D +  G L+ E+  G+     +K
Sbjct: 171 EVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRK 205

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. Length = 285

>gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

 Score = 65.1 bits (158), Expect = 2e-11
 Identities = 57/197 (28%), Positives = 91/197 (46%), Gaps = 14/197 (7%)

Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           VGSG +G VY+      G   A+K I             EI  +   +H N+V   G   
Sbjct: 17  VGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYL 76

Query: 398 KQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVV 457
            +++L +  +Y   GSL  +     + +   L+  Q   +     Q L YLH +     +
Sbjct: 77  SREKLWICMEYCGGGSLQDI-----YHVTGPLSELQIAYVCRETLQGLAYLHSKGK---M 128

Query: 458 HRDVKPSNILLDTYLNAKLGDFGL-AKIYEHGANPQTTHIVGTLGYLAPELT---RTGKA 513
           HRD+K +NILL    + KL DFG+ AKI    A  ++   +GT  ++APE+    + G  
Sbjct: 129 HRDIKGANILLTDNGDVKLADFGVAAKITATIAKRKS--FIGTPYWMAPEVAAVEKNGGY 186

Query: 514 TTSTDVYSYGILMLEVA 530
               D+++ GI  +E+A
Sbjct: 187 NQLCDIWAVGITAIELA 203

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267

>gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

 Score = 65.5 bits (160), Expect = 2e-11
 Identities = 51/190 (26%), Positives = 85/190 (44%), Gaps = 35/190 (18%)

Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVA--EIMSMGRLRHRNLVQLHGW 395
           +G G FG V++         VA+K++   +++      A  EI  +  L+H N+V L   
Sbjct: 20  IGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 79

Query: 396 CRK--------QDELLLVYDYVPNGSLDKLLFDKDHKLRKLL-------TWDQRYKILIG 440
           CR         +    LV+++             +H L  LL       T  +  K++  
Sbjct: 80  CRTKATPYNRYKGSFYLVFEFC------------EHDLAGLLSNKNVKFTLSEIKKVMKM 127

Query: 441 IAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIY---EHGANPQTTHIV 497
           +   L Y+H     +++HRD+K +NIL+      KL DFGLA+ +   ++    + T+ V
Sbjct: 128 LLNGLYYIH---RNKILHRDMKAANILITKDGILKLADFGLARAFSLSKNSKPNRYTNRV 184

Query: 498 GTLGYLAPEL 507
            TL Y  PEL
Sbjct: 185 VTLWYRPPEL 194

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310

>gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

 Score = 65.1 bits (158), Expect = 2e-11
 Identities = 55/197 (27%), Positives = 95/197 (48%), Gaps = 11/197 (5%)

Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMK-EFVAEIMSMGRLRHRNLVQLHGWC 396
           +G G +  VY+G     G  VA+K I    ++G     + E   +  L+H N+V LH   
Sbjct: 13  LGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDII 72

Query: 397 RKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRV 456
             ++ L LV++YV     D   +   H     L  +     L  + + L Y+H+   + +
Sbjct: 73  HTKETLTLVFEYV---HTDLCQYMDKHP--GGLHPENVKLFLFQLLRGLSYIHQ---RYI 124

Query: 457 VHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPE-LTRTGKATT 515
           +HRD+KP N+L+      KL DFGLA+     ++  +  +V TL Y  P+ L  + + +T
Sbjct: 125 LHRDLKPQNLLISDTGELKLADFGLARAKSVPSHTYSNEVV-TLWYRPPDVLLGSTEYST 183

Query: 516 STDVYSYGILMLEVACG 532
             D++  G + +E+  G
Sbjct: 184 CLDMWGVGCIFVEMIQG 200

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303

>gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

 Score = 65.4 bits (159), Expect = 2e-11
 Identities = 50/215 (23%), Positives = 106/215 (49%), Gaps = 28/215 (13%)

Query: 338 VGSGGFGRVYRGLMPSLGLE---------VAIKRIGHN-SQQGMKEFVAEIMSMGRL-RH 386
           +G G FG+V   +  ++GL+         VA+K +  + +++ + + ++E+  M  + +H
Sbjct: 26  LGEGCFGQVV--MAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 83

Query: 387 RNLVQLHGWCRKQDELLLVYDYVPNGSLDKLL-----------FDKDHKLRKLLTWDQRY 435
           +N++ L G C +   L ++ +Y   G+L + L           ++      + L++    
Sbjct: 84  KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLV 143

Query: 436 KILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEH-GANPQTT 494
                +A+ + YL    +++ +HRD+   N+L+      K+ DFGLA+   H     +TT
Sbjct: 144 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 200

Query: 495 HIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEV 529
           +    + ++APE       T  +DV+S+G+L+ E+
Sbjct: 201 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 235

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307

>gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 65.0 bits (158), Expect = 2e-11
 Identities = 54/201 (26%), Positives = 100/201 (49%), Gaps = 16/201 (7%)

Query: 338 VGSGGFGRV----YRGLMPSLGLEVAIKRIG-HNSQQGMKEFVAEIMSMGRLRHRNLVQL 392
           +G G FG+V    Y     + G +VA+K +   +    + +   EI  +  L H N+V+ 
Sbjct: 12  LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 71

Query: 393 HGWCRKQ--DELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHE 450
            G C +   + + L+ +++P+GSL + L    +K+       Q+ K  + I + + YL  
Sbjct: 72  KGICTEDGGNGIKLIMEFLPSGSLKEYLPRNKNKI----NLKQQLKYAVQICKGMDYLG- 126

Query: 451 ECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTH--IVGTLGYLAPELT 508
             +++ VHRD+   N+L+++    K+GDFGL K  E      T    +   + + APE  
Sbjct: 127 --SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPECL 184

Query: 509 RTGKATTSTDVYSYGILMLEV 529
              K   ++DV+S+G+ + E+
Sbjct: 185 IQSKFYIASDVWSFGVTLYEL 205

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284

>gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

 Score = 64.7 bits (157), Expect = 2e-11
 Identities = 64/278 (23%), Positives = 123/278 (44%), Gaps = 33/278 (11%)

Query: 338 VGSGGFGRVYRGLMPSL-----GLEVAIKRIGHNSQQGMKE---FVAEIMSMGRLRHRNL 389
           +G G FG VY G+   +        VAIK +  N    M+E   F+ E   M      ++
Sbjct: 14  LGQGSFGMVYEGIAKGVVKDEPETRVAIKTV--NEAASMRERIEFLNEASVMKEFNCHHV 71

Query: 390 VQLHGWCRKQDELLLVYDYVPNGSLDKLLFD-----KDHKLRKLLTWDQRYKILIGIAQS 444
           V+L G   +    L++ + +  G L   L       +++ ++   +  +  ++   IA  
Sbjct: 72  VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADG 131

Query: 445 LLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IYEHGANPQTTHIVGTLGYL 503
           + YL+     + VHRD+   N ++      K+GDFG+ + IYE     +    +  + ++
Sbjct: 132 MAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 188

Query: 504 APELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQA 563
           +PE  + G  TT +DV+S+G+++ E+A    + +P +  +   ++ +V    +EG +   
Sbjct: 189 SPESLKDGVFTTYSDVWSFGVVLWEIAT--LAEQPYQGMSNEQVLRFV----MEGGLLDK 242

Query: 564 IDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVV 601
            D   D        ++  L   C   NP  RP    ++
Sbjct: 243 PDNCPD--------MLFELMRMCWQYNPKMRPSFLEII 272

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277

>gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

 Score = 65.1 bits (158), Expect = 2e-11
 Identities = 68/223 (30%), Positives = 105/223 (47%), Gaps = 18/223 (8%)

Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRL----RHRNLVQL 392
           L+G G FG+V      + G   A+K I        K+ VA  ++  R+    RH  L  L
Sbjct: 2   LLGKGTFGKVILVREKASGKYYAMK-ILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSL 60

Query: 393 HGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKIL-IGIAQSLLYLHEE 451
               + +D L  V +YV  G   +L F   H  R+ +  + R +     I  +L YLH  
Sbjct: 61  KYSFQTKDRLCFVMEYVNGG---ELFF---HLSRERVFSEDRTRFYGAEIVSALDYLH-- 112

Query: 452 CNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTG 511
            + ++V+RD+K  N++LD   + K+ DFGL K     A    T   GT  YLAPE+    
Sbjct: 113 -SGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMKT-FCGTPEYLAPEVLEDN 170

Query: 512 KATTSTDVYSYGILMLEVACGRRSIEPQ--KAAAELLLVDWVK 552
               + D +  G++M E+ CGR     Q  +   EL+L++ +K
Sbjct: 171 DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEDIK 213

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328

>gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

 Score = 65.0 bits (158), Expect = 3e-11
 Identities = 68/286 (23%), Positives = 128/286 (44%), Gaps = 38/286 (13%)

Query: 338 VGSGGFGRVYRGLM-------PSLGLEVAIKRIGHN-SQQGMKEFVAEIMSMGRL-RHRN 388
           +G G FG+V            P+  + VA+K +  + + + + + V+E+  M  + +H+N
Sbjct: 20  LGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKN 79

Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSLDKLL-----------FDKDHKLRKLLTWDQRYKI 437
           ++ L G C +   L ++ +Y   G+L + L           FD      + LT+      
Sbjct: 80  IINLLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSC 139

Query: 438 LIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IYEHGANPQTTHI 496
              +A+ + YL    +Q+ +HRD+   N+L+      K+ DFGLA+ ++      +TT+ 
Sbjct: 140 AYQVARGMEYL---ASQKCIHRDLAARNVLVTEDNVMKIADFGLARDVHNIDYYKKTTNG 196

Query: 497 VGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHL 556
              + ++APE       T  +DV+S+G+L+ E+     S  P     EL  +  +KE H 
Sbjct: 197 RLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKL--LKEGH- 253

Query: 557 EGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVE 602
              + +  + T + Y +            C    P  RP  +++VE
Sbjct: 254 --RMDKPANCTHELYMIMRE---------CWHAVPSQRPTFKQLVE 288

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334

>gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

 Score = 64.6 bits (157), Expect = 3e-11
 Identities = 66/212 (31%), Positives = 98/212 (46%), Gaps = 29/212 (13%)

Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRL-RHRNLVQLHGWC 396
           +G G +G+VY+      G   A+K +   S    +E  AE   +  L  H N+V+ +G  
Sbjct: 30  IGKGTYGKVYKVTNKKDGSLAAVKILDPISDVD-EEIEAEYNILQSLPNHPNVVKFYGMF 88

Query: 397 RKQD-----ELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYK------ILIGIAQSL 445
            K D     +L LV +    GS+ +L+       + LL   QR        IL G    L
Sbjct: 89  YKADKLVGGQLWLVLELCNGGSVTELV-------KGLLICGQRLDEAMISYILYGALLGL 141

Query: 446 LYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAP 505
            +LH   N R++HRDVK +NILL T    KL DFG++         + T  VGT  ++AP
Sbjct: 142 QHLH---NNRIIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLRRNTS-VGTPFWMAP 197

Query: 506 ELTRTGKATTST-----DVYSYGILMLEVACG 532
           E+    +    +     DV+S GI  +E+  G
Sbjct: 198 EVIACEQQYDYSYDARCDVWSLGITAIELGDG 229

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291

>gnl|CDD|133209 cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 64.1 bits (156), Expect = 3e-11
 Identities = 46/206 (22%), Positives = 97/206 (47%), Gaps = 18/206 (8%)

Query: 338 VGSGGFGRVYRGLMPSLG-------LEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLV 390
           +G G F ++++G+   +G        EV +K +  + +   + F      M +L H++LV
Sbjct: 3   LGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLV 62

Query: 391 QLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHE 450
             +G C   DE ++V +YV  GSLD  L    + +   ++W  + ++   +A +L +L +
Sbjct: 63  LNYGVCVCGDESIMVQEYVKFGSLDTYLKKNKNLIN--ISW--KLEVAKQLAWALHFLED 118

Query: 451 ECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTH---IVGTLGYLAPEL 507
              + + H +V   N+LL    + K G+    K+ + G +        ++  + ++ PE 
Sbjct: 119 ---KGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVLPKEILLERIPWVPPEC 175

Query: 508 TRTGKA-TTSTDVYSYGILMLEVACG 532
               +  + + D +S+G  + E+  G
Sbjct: 176 IENPQNLSLAADKWSFGTTLWEIFSG 201

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 258

>gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

 Score = 64.4 bits (157), Expect = 4e-11
 Identities = 62/202 (30%), Positives = 92/202 (45%), Gaps = 16/202 (7%)

Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRL----RHRNLVQL 392
           L+G G FG+V      + G   A+K I        K+ VA  ++  R+    RH  L  L
Sbjct: 2   LLGKGTFGKVILVREKATGKYYAMK-ILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTAL 60

Query: 393 HGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEEC 452
               +  D L  V +Y   G   +L F    +  ++ + D+       I  +L YLH   
Sbjct: 61  KYSFQTHDRLCFVMEYANGG---ELFFHLSRE--RVFSEDRARFYGAEIVSALGYLHS-- 113

Query: 453 NQRVVHRDVKPSNILLDTYLNAKLGDFGLAKI-YEHGANPQTTHIVGTLGYLAPELTRTG 511
              VV+RD+K  N++LD   + K+ DFGL K     GA  +T    GT  YLAPE+    
Sbjct: 114 -CDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATMKT--FCGTPEYLAPEVLEDN 170

Query: 512 KATTSTDVYSYGILMLEVACGR 533
               + D +  G++M E+ CGR
Sbjct: 171 DYGRAVDWWGLGVVMYEMMCGR 192

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score = 64.0 bits (156), Expect = 4e-11
 Identities = 60/201 (29%), Positives = 93/201 (46%), Gaps = 19/201 (9%)

Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMK--EFV-AEIMSMGRLRHRNLVQLH 393
            VG+G FGRV+           A+K +       +K  + V  E   +  + H  +++L 
Sbjct: 8   TVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLF 67

Query: 394 GWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIG--IAQSLLYLHEE 451
                Q  L ++ +YVP G L    F     LR    +     +     I  +L YLH  
Sbjct: 68  WTEHDQRFLYMLMEYVPGGEL----FSY---LRNSGRFSNSTGLFYASEIVCALEYLH-- 118

Query: 452 CNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTG 511
            ++ +V+RD+KP NILLD   + KL DFG AK        +T  + GT  YLAPE+ ++ 
Sbjct: 119 -SKEIVYRDLKPENILLDKEGHIKLTDFGFAK----KLRDRTWTLCGTPEYLAPEVIQSK 173

Query: 512 KATTSTDVYSYGILMLEVACG 532
               + D ++ GIL+ E+  G
Sbjct: 174 GHNKAVDWWALGILIYEMLVG 194

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|173689 cd05598, STKc_LATS, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

 Score = 64.8 bits (158), Expect = 4e-11
 Identities = 55/212 (25%), Positives = 90/212 (42%), Gaps = 53/212 (25%)

Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYL 448
           +V+L+   + +D L  V DY+P G +  LL        +L  +++       IA+    +
Sbjct: 63  VVKLYYSFQDKDNLYFVMDYIPGGDMMSLLI-------RLGIFEEDLARFY-IAELTCAI 114

Query: 449 HEECNQRVVHRDVKPSNILLDTYLNAKLGDFGL---------AKIYEHGANPQ------- 492
                   +HRD+KP NIL+D   + KL DFGL         +K Y+ G + +       
Sbjct: 115 ESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPS 174

Query: 493 -------------------------TTH-IVGTLGYLAPE-LTRTGKATTSTDVYSYGIL 525
                                      H +VGT  Y+APE L RTG  T   D +S G++
Sbjct: 175 EEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGY-TQLCDWWSVGVI 233

Query: 526 MLEVACGRRS-IEPQKAAAELLLVDWVKELHL 556
           + E+  G+   +    A  +L +++W   LH+
Sbjct: 234 LYEMLVGQPPFLADTPAETQLKVINWETTLHI 265

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Length = 376

>gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

 Score = 63.4 bits (154), Expect = 4e-11
 Identities = 55/206 (26%), Positives = 101/206 (49%), Gaps = 19/206 (9%)

Query: 335 QNLVGSGGFGRVY--------RGLMPSLGLEVAIKRIGHN-SQQGMKEFVAEIMSMGRLR 385
           Q  +G G FG VY              +  E+ +  +  N + Q  +E  A+++S  +L 
Sbjct: 5   QQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQE--AQLLS--KLD 60

Query: 386 HRNLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSL 445
           H  +V+ H    ++D   ++ +Y     LD  L +  H   K L+ +Q  +  I +   +
Sbjct: 61  HPAIVKFHASFLERDAFCIITEYCEGRDLDCKLEELKHT-GKTLSENQVCEWFIQLLLGV 119

Query: 446 LYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAP 505
            Y+H+   +R++HRD+K  NI L   L  K+GDFG++++     +  TT   GT  Y++P
Sbjct: 120 HYMHQ---RRILHRDLKAKNIFLKNNL-LKIGDFGVSRLLMGSCDLATT-FTGTPYYMSP 174

Query: 506 ELTRTGKATTSTDVYSYGILMLEVAC 531
           E  +     + +D++S G ++ E+ C
Sbjct: 175 EALKHQGYDSKSDIWSLGCILYEMCC 200

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260

>gnl|CDD|173711 cd05621, STKc_ROCK2, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

 Score = 64.7 bits (157), Expect = 4e-11
 Identities = 47/152 (30%), Positives = 74/152 (48%), Gaps = 21/152 (13%)

Query: 389 LVQLHGWCRKQDE--LLLVYDYVPNGSLDKLL--FDKDHKLRKLLTWDQRYKILIGIAQS 444
           +VQL  +C  QD+  L +V +Y+P G L  L+  +D   K  K  T           A+ 
Sbjct: 105 VVQL--FCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYT-----------AEV 151

Query: 445 LLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLA 504
           +L L    +  ++HRDVKP N+LLD + + KL DFG     +     +    VGT  Y++
Sbjct: 152 VLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVRCDTAVGTPDYIS 211

Query: 505 PELTRT----GKATTSTDVYSYGILMLEVACG 532
           PE+ ++    G      D +S G+ + E+  G
Sbjct: 212 PEVLKSQGGDGYYGRECDWWSVGVFLFEMLVG 243

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. Length = 370

>gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

 Score = 64.8 bits (158), Expect = 5e-11
 Identities = 62/216 (28%), Positives = 100/216 (46%), Gaps = 41/216 (18%)

Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +G G FG V+    P  G  VA+K++ +  Q         ++S  R+  R L  L   C 
Sbjct: 8   IGYGAFGVVWSVTDPRDGKRVALKKMPNVFQ--------NLVSCKRV-FRELKML---CF 55

Query: 398 -KQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWD--------QR----------YKIL 438
            K D +L   D +    +D   F++ + + +L+  D        Q           Y+IL
Sbjct: 56  FKHDNVLSALDILQPPHID--PFEEIYVVTELMQSDLHKIIVSPQPLSSDHVKVFLYQIL 113

Query: 439 IGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVG 498
            G    L YLH   +  ++HRD+KP N+L+++    K+ DFGLA++ E   +   T  V 
Sbjct: 114 RG----LKYLH---SAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDESKHMTQEVV 166

Query: 499 TLGYLAPE-LTRTGKATTSTDVYSYGILMLEVACGR 533
           T  Y APE L  +   T++ D++S G +  E+   R
Sbjct: 167 TQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRR 202

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372

>gnl|CDD|173713 cd05624, STKc_MRCK_beta, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

 Score = 64.3 bits (156), Expect = 5e-11
 Identities = 46/149 (30%), Positives = 71/149 (47%), Gaps = 12/149 (8%)

Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYL 448
           +  LH   + ++ L LV DY   G L  LL   + +L + +    R+ I    A+ +L +
Sbjct: 63  ITTLHYAFQDENYLYLVMDYYVGGDLLTLLSKFEDRLPEDMA---RFYI----AEMVLAI 115

Query: 449 HEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELT 508
           H       VHRD+KP N+LLD   + +L DFG           Q++  VGT  Y++PE+ 
Sbjct: 116 HSIHQLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTVQSSVAVGTPDYISPEIL 175

Query: 509 RT-----GKATTSTDVYSYGILMLEVACG 532
           +      GK     D +S G+ M E+  G
Sbjct: 176 QAMEDGMGKYGPECDWWSLGVCMYEMLYG 204

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. Length = 331

>gnl|CDD|133175 cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

 Score = 63.6 bits (155), Expect = 6e-11
 Identities = 48/220 (21%), Positives = 99/220 (45%), Gaps = 21/220 (9%)

Query: 325 LASVTKGFGEQNLVGSGGFGRVYRGLM----PSLGLEVAIKRI-GHNSQQGMKEFVAEIM 379
           +A         +L+  G FGR++ G++    P    EV +K +  H S+  +   + E  
Sbjct: 1   IAISRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESC 60

Query: 380 SMGRLRHRNLVQLHGWC-RKQDELLLVYDYVPNGSLDKLLFD-KDHKLRKLLTWDQRYKI 437
            +  L H+N++ +   C    +   ++Y Y+  G+L   L   +  +         +  +
Sbjct: 61  LLYGLSHQNILPILHVCIEDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLV 120

Query: 438 LIG--IAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTH 495
            +   IA  + YLH    + V+H+D+   N ++D  L  K+ D  L++       P   H
Sbjct: 121 HMAIQIACGMSYLH---KRGVIHKDIAARNCVIDEELQVKITDNALSR----DLFPMDYH 173

Query: 496 IVGT-----LGYLAPELTRTGKATTSTDVYSYGILMLEVA 530
            +G      + ++A E     + ++++DV+S+G+L+ E+ 
Sbjct: 174 CLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELM 213

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It acts as a chemorepulsive axon guidance receptor of Wnt glycoproteins and is responsible for the establishment of axon tracts during the development of the central nervous system. In addition, studies in mice reveal that Ryk is essential in skeletal, craniofacial, and cardiac development. Thus, it appears Ryk is involved in signal transduction despite its lack of kinase activity. Ryk may function as an accessory protein that modulates the signals coming from catalytically active partner RTKs such as the Eph receptors. Length = 280

>gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

 Score = 64.2 bits (157), Expect = 6e-11
 Identities = 59/215 (27%), Positives = 97/215 (45%), Gaps = 35/215 (16%)

Query: 334 EQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGM--KEFVAEIMSMGRLRHRNLVQ 391
             + VGSG +G+V        G +VAIK++    Q  +  K    E+  +  + H N++ 
Sbjct: 19  NLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVI- 77

Query: 392 LHGWCRKQDELLLVYDYVPNGSLDKL--------LFDKD-HKLRKL--LTWDQRYKILI- 439
                     LL V+   P  SL+          L   D + + K   L+ D   + L+ 
Sbjct: 78  ---------GLLDVF--TPASSLEDFQDVYLVTHLMGADLNNIVKCQKLS-DDHIQFLVY 125

Query: 440 GIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGT 499
            I + L Y+H   +  ++HRD+KPSNI ++     K+ DFGLA+  +     + T  V T
Sbjct: 126 QILRGLKYIH---SAGIIHRDLKPSNIAVNEDCELKILDFGLARHTDD----EMTGYVAT 178

Query: 500 LGYLAPE-LTRTGKATTSTDVYSYGILMLEVACGR 533
             Y APE +        + D++S G +M E+  G+
Sbjct: 179 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGK 213

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343

>gnl|CDD|173616 PTZ00426, PTZ00426, cAMP-dependent protein kinase catalytic subunit; Provisional

 Score = 63.8 bits (155), Expect = 6e-11
 Identities = 55/202 (27%), Positives = 92/202 (45%), Gaps = 22/202 (10%)

Query: 338 VGSGGFGRVYRGLMPSLGLE-VAIKRIGHNS---QQGMKEFVAEIMSMGRLRHRNLVQLH 393
           +G+G FGRV      +     VAIKR   +    Q+ +    +E   +  + H   V L+
Sbjct: 38  LGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLY 97

Query: 394 GWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGI---AQSLLYLHE 450
           G  + +  L LV ++V  G           +    L  ++R+   +G    AQ +L    
Sbjct: 98  GSFKDESYLYLVLEFVIGG-----------EFFTFLRRNKRFPNDVGCFYAAQIVLIFEY 146

Query: 451 ECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRT 510
             +  +V+RD+KP N+LLD     K+ DFG AK+ +     +T  + GT  Y+APE+   
Sbjct: 147 LQSLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVD----TRTYTLCGTPEYIAPEILLN 202

Query: 511 GKATTSTDVYSYGILMLEVACG 532
                + D ++ GI + E+  G
Sbjct: 203 VGHGKAADWWTLGIFIYEILVG 224

Length = 340

>gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

 Score = 63.9 bits (155), Expect = 6e-11
 Identities = 63/209 (30%), Positives = 101/209 (48%), Gaps = 23/209 (11%)

Query: 335 QNL--VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGM--KEFVAEIMSMGRLRHRNLV 390
           QNL  VGSG +G V        GL VA+K++    Q  +  K    E+  +  ++H N++
Sbjct: 20  QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 79

Query: 391 QL---HGWCRKQDELLLVY--DYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSL 445
            L       R  +E   VY   ++    L+ ++     K +KL T D    ++  I + L
Sbjct: 80  GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKL-TDDHVQFLIYQILRGL 133

Query: 446 LYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAP 505
            Y+H   +  ++HRD+KPSN+ ++     K+ DFGLA+   H  +  T + V T  Y AP
Sbjct: 134 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGY-VATRWYRAP 186

Query: 506 ELTRTGKATTST-DVYSYGILMLEVACGR 533
           E+         T D++S G +M E+  GR
Sbjct: 187 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 215

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345

>gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

 Score = 63.8 bits (155), Expect = 7e-11
 Identities = 62/213 (29%), Positives = 104/213 (48%), Gaps = 25/213 (11%)

Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS-------QQGMKEFVAEIMSMGRLRHRNL 389
           ++G G FG+V    +   G   A+K +  +        +  M E    I+S+ R  H  L
Sbjct: 2   VLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTE--KRILSLAR-NHPFL 58

Query: 390 VQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQ-RYKILIG-IAQSLLY 447
            QL+   +  D L  V ++V  G L   +F     ++K   +D+ R +     I  +L++
Sbjct: 59  TQLYCCFQTPDRLFFVMEFVNGGDL---MF----HIQKSRRFDEARARFYAAEITSALMF 111

Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTH-IVGTLGYLAPE 506
           LH+   + +++RD+K  N+LLD   + KL DFG+ K  E   N +TT    GT  Y+APE
Sbjct: 112 LHD---KGIIYRDLKLDNVLLDHEGHCKLADFGMCK--EGIFNGKTTSTFCGTPDYIAPE 166

Query: 507 LTRTGKATTSTDVYSYGILMLEVACGRRSIEPQ 539
           + +      S D ++ G+L+ E+ CG    E +
Sbjct: 167 ILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAE 199

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320

>gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

 Score = 63.6 bits (155), Expect = 7e-11
 Identities = 42/148 (28%), Positives = 77/148 (52%), Gaps = 15/148 (10%)

Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIG--IAQSLL 446
           L QLH   +  D L  V +YV  G L   ++     ++++  + + + +     IA  L 
Sbjct: 63  LTQLHSCFQTMDRLYFVMEYVNGGDL---MY----HIQQVGKFKEPHAVFYAAEIAIGLF 115

Query: 447 YLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTH-IVGTLGYLAP 505
           +LH   ++ +++RD+K  N++LD   + K+ DFG+ K  E+    +TT    GT  Y+AP
Sbjct: 116 FLH---SKGIIYRDLKLDNVMLDAEGHIKIADFGMCK--ENIFGGKTTRTFCGTPDYIAP 170

Query: 506 ELTRTGKATTSTDVYSYGILMLEVACGR 533
           E+        S D +++G+L+ E+  G+
Sbjct: 171 EIIAYQPYGKSVDWWAFGVLLYEMLAGQ 198

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324

>gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

 Score = 63.1 bits (153), Expect = 8e-11
 Identities = 73/286 (25%), Positives = 123/286 (43%), Gaps = 37/286 (12%)

Query: 338 VGSGGFGRVYRGLMPSL-----GLEVAIKRIGHN-SQQGMKEFVAEIMSMGRLRHRNLVQ 391
           +G G FG VY G    +        VA+K +  + S +   EF+ E   M      ++V+
Sbjct: 14  LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 73

Query: 392 LHGWCRKQDELLLVYDYVPNGSLDKLLFD-----KDHKLRKLLTWDQRYKILIGIAQSLL 446
           L G   K    L+V + + +G L   L       +++  R   T  +  ++   IA  + 
Sbjct: 74  LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 133

Query: 447 YLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IYEHGANPQTTHIVGTLGYLAP 505
           YL+    ++ VHRD+   N ++      K+GDFG+ + IYE     +    +  + ++AP
Sbjct: 134 YLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 190

Query: 506 ELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAID 565
           E  + G  TTS+D++S+G+++ E+     S+  Q                L  E  Q + 
Sbjct: 191 ESLKDGVFTTSSDMWSFGVVLWEIT----SLAEQPYQG------------LSNE--QVLK 232

Query: 566 QTLD--YYDLAE--AELVLNLGLFCSAPNPVYRPDMRRVVEFLLGD 607
             +D  Y D  +   E V +L   C   NP  RP    +V  L  D
Sbjct: 233 FVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 278

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288

>gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

 Score = 63.6 bits (155), Expect = 8e-11
 Identities = 59/222 (26%), Positives = 94/222 (42%), Gaps = 44/222 (19%)

Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLV------- 390
           +G G  G V+  +       VA+K+I     Q +K  + EI  + RL H N+V       
Sbjct: 13  LGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLG 72

Query: 391 ----QLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQ---------RYKI 437
                L        EL  VY       + +   + D  L  +L              Y++
Sbjct: 73  PSGSDLTEDVGSLTELNSVY-------IVQEYMETD--LANVLEQGPLSEEHARLFMYQL 123

Query: 438 LIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTY-LNAKLGDFGLAKI----YEHGANPQ 492
           L G    L Y+H   +  V+HRD+KP+N+ ++T  L  K+GDFGLA+I    Y H     
Sbjct: 124 LRG----LKYIH---SANVLHRDLKPANVFINTEDLVLKIGDFGLARIVDPHYSHKG--Y 174

Query: 493 TTHIVGTLGYLAPELT-RTGKATTSTDVYSYGILMLEVACGR 533
            +  + T  Y +P L       T + D+++ G +  E+  G+
Sbjct: 175 LSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGK 216

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342

>gnl|CDD|165476 PHA03210, PHA03210, serine/threonine kinase US3; Provisional

 Score = 63.9 bits (155), Expect = 1e-10
 Identities = 44/158 (27%), Positives = 81/158 (51%), Gaps = 14/158 (8%)

Query: 377 EIMSMGRLRHRNLVQLHGWCRKQDELLLV---YDYVPNGSLDKLLFDKDH--KLRKLLTW 431
           EI+++GRL H N++++    R +    ++   YD+     L   ++D+    K R LL  
Sbjct: 213 EILALGRLNHENILKIEEILRSEANTYMITQKYDF----DLYSFMYDEAFDWKDRPLL-K 267

Query: 432 DQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANP 491
             R  I+  +  ++ Y+H   +++++HRD+K  NI L+      LGDFG A  +E     
Sbjct: 268 QTR-AIMKQLLCAVEYIH---DKKLIHRDIKLENIFLNCDGKIVLGDFGTAMPFEKEREA 323

Query: 492 QTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEV 529
                VGT+   +PE+         TD++S G+++L++
Sbjct: 324 FDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDM 361

Length = 501

>gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

 Score = 63.1 bits (153), Expect = 1e-10
 Identities = 53/209 (25%), Positives = 95/209 (45%), Gaps = 19/209 (9%)

Query: 332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRN--- 388
           F    ++G G FG+V            AIK +  +      +    ++    L  ++   
Sbjct: 2   FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPP 61

Query: 389 -LVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIG--IAQSL 445
            L QLH   +  D L  V +YV  G L        + ++++  + +   +     I+  L
Sbjct: 62  FLTQLHSCFQTVDRLYFVMEYVNGGDLM-------YHIQQVGKFKEPQAVFYAAEISVGL 114

Query: 446 LYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTH-IVGTLGYLA 504
            +LH    + +++RD+K  N++LD+  + K+ DFG+ K  EH  +  TT    GT  Y+A
Sbjct: 115 FFLHR---RGIIYRDLKLDNVMLDSEGHIKIADFGMCK--EHMVDGVTTRTFCGTPDYIA 169

Query: 505 PELTRTGKATTSTDVYSYGILMLEVACGR 533
           PE+        S D ++YG+L+ E+  G+
Sbjct: 170 PEIIAYQPYGKSVDWWAYGVLLYEMLAGQ 198

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323

>gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional

 Score = 62.9 bits (153), Expect = 1e-10
 Identities = 55/205 (26%), Positives = 91/205 (44%), Gaps = 25/205 (12%)

Query: 336 NLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKE---FVAEIMSMGRLRHRNLVQL 392
             +G+G FGRV        G   AIK +       MK+      E   +  L H  +V +
Sbjct: 24  ETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNM 83

Query: 393 HGWCRKQDELLLVYDYVPNGSLDKLL-----FDKDHKLRKLLTWDQRYKILIGIAQSLLY 447
               + ++ +  + ++V  G L   L     F  D  + K       Y   + +A    Y
Sbjct: 84  MCSFQDENRVYFLLEFVVGGELFTHLRKAGRFPND--VAKF------YHAELVLA--FEY 133

Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
           LH   ++ +++RD+KP N+LLD   + K+ DFG AK        +T  + GT  YLAPE+
Sbjct: 134 LH---SKDIIYRDLKPENLLLDNKGHVKVTDFGFAK----KVPDRTFTLCGTPEYLAPEV 186

Query: 508 TRTGKATTSTDVYSYGILMLEVACG 532
            ++     + D ++ G+L+ E   G
Sbjct: 187 IQSKGHGKAVDWWTMGVLLYEFIAG 211

Length = 329

>gnl|CDD|173687 cd05596, STKc_ROCK, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

 Score = 63.3 bits (154), Expect = 1e-10
 Identities = 46/150 (30%), Positives = 72/150 (48%), Gaps = 17/150 (11%)

Query: 389 LVQLHGWCRKQDE--LLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLL 446
           +VQLH     QD+  L +V +Y+P G L  L+ + D   +    W + Y      A+ +L
Sbjct: 105 IVQLH--YAFQDDKYLYMVMEYMPGGDLVNLMSNYDIPEK----WARFY-----TAEVVL 153

Query: 447 YLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPE 506
            L    +   +HRDVKP N+LLD   + KL DFG     +     +    VGT  Y++PE
Sbjct: 154 ALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANGMVRCDTAVGTPDYISPE 213

Query: 507 LTRT----GKATTSTDVYSYGILMLEVACG 532
           + ++    G      D +S G+ + E+  G
Sbjct: 214 VLKSQGGDGYYGRECDWWSVGVFLYEMLVG 243

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via interaction with Rho GTPases and is involved in many cellular functions including contraction, adhesion, migration, motility, proliferation, and apoptosis. The ROCK subfamily consists of two isoforms, ROCK1 and ROCK2, which may be functionally redundant in some systems, but exhibit different tissue distributions. Both isoforms are ubiquitously expressed in most tissues, but ROCK2 is more prominent in brain and skeletal muscle while ROCK1 is more pronounced in the liver, testes, and kidney. Studies in knockout mice result in different phenotypes, suggesting that the two isoforms do not compensate for each other during embryonic development. Length = 370

>gnl|CDD|173627 cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 61.7 bits (150), Expect = 2e-10
 Identities = 62/262 (23%), Positives = 109/262 (41%), Gaps = 50/262 (19%)

Query: 339 GSGGFGRVYRGLM----------PSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRN 388
           G G F  +Y+G++          P   + V +K +G + +  +  F      M +L H++
Sbjct: 4   GQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSL-AFFETASLMSQLSHKH 62

Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYL 448
           LV+L+G C + DE ++V +YV  G LD  L    H+ +  ++   +  +   +A +L YL
Sbjct: 63  LVKLYGVCVR-DENIMVEEYVKFGPLDVFL----HREKNNVSLHWKLDVAKQLASALHYL 117

Query: 449 HEECNQRVVHRDVKPSNILLDTY-------LNAKLGDFGLAKIYEHGANPQTTHIVGTLG 501
            +   +++VH +V   NIL+  Y          KL D G+               V  + 
Sbjct: 118 ED---KKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVLSREER-----VERIP 169

Query: 502 YLAPELTRTGKA--TTSTDVYSYGILMLEVACG----------RRSIEPQKAAAELLLVD 549
           ++APE  R G+A  T + D +S+G  +LE+                    +    L + D
Sbjct: 170 WIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFYQDQHRLPMPD 229

Query: 550 WVKELHLEGEITQAIDQTLDYY 571
                    E+   I+Q   Y 
Sbjct: 230 C-------AELANLINQCWTYD 244

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 259

>gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

 Score = 62.3 bits (151), Expect = 2e-10
 Identities = 59/202 (29%), Positives = 95/202 (47%), Gaps = 15/202 (7%)

Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRL-----RHRNLVQ 391
           ++G G FG+V+   +       AIK +  +    M + V   M   R+      H  L  
Sbjct: 2   MLGKGSFGKVFLAELKGTNQFFAIKALKKDVVL-MDDDVECTMVEKRVLSLAWEHPFLTH 60

Query: 392 LHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEE 451
           L+   + ++ L  V +Y+  G L        HK           +I+ G    L +LH  
Sbjct: 61  LYCTFQTKENLFFVMEYLNGGDL-MFHIQSCHKFDLPRATFYAAEIICG----LQFLH-- 113

Query: 452 CNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTG 511
            ++ +V+RD+K  NILLDT  + K+ DFG+ K    G + +T    GT  Y+APE+    
Sbjct: 114 -SKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLG-DAKTCTFCGTPDYIAPEILLGQ 171

Query: 512 KATTSTDVYSYGILMLEVACGR 533
           K  TS D +S+G+L+ E+  G+
Sbjct: 172 KYNTSVDWWSFGVLLYEMLIGQ 193

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316

>gnl|CDD|173646 cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

 Score = 61.9 bits (150), Expect = 2e-10
 Identities = 59/206 (28%), Positives = 97/206 (47%), Gaps = 20/206 (9%)

Query: 338 VGSGGFGRVYRGLMPSLGL---EVAIKRIGHN-SQQGMKEFVAEIMSMGRLRHRNLVQLH 393
           +G+G FG+V  G + S G    +V +K +  + S Q   +F+ E      L+H NL+Q  
Sbjct: 3   IGNGWFGKVILGEVNS-GYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCL 61

Query: 394 GWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQR--YKILIGIAQSLLYLHEE 451
           G C +    LLV ++ P G L   L  +  +  +L+T D     ++   IA  LL+LH+ 
Sbjct: 62  GQCTEVTPYLLVMEFCPLGDLKGYL--RSCRKAELMTPDPTTLQRMACEIALGLLHLHK- 118

Query: 452 CNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKI-YEHGANPQTTHIVGTLGYLAPELTR- 509
                +H D+   N LL   L  K+GD+GL+   Y+         +   L ++APEL   
Sbjct: 119 --NNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVTPDQLWVPLRWIAPELVDE 176

Query: 510 ------TGKATTSTDVYSYGILMLEV 529
                     T  ++V+S G+ + E+
Sbjct: 177 VHGNLLVVDQTKESNVWSLGVTIWEL 202

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells. Aatyk1 has been implicated in neural differentiation, and is a regulator of the Na-K-2Cl cotransporter, a membrane protein involved in cell proliferation and survival, epithelial transport, and blood pressure control. The function of Aatyk3 is still unknown. Length = 269

>gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional

 Score = 63.0 bits (153), Expect = 2e-10
 Identities = 33/93 (35%), Positives = 53/93 (56%), Gaps = 1/93 (1%)

Query: 443 QSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTH-IVGTLG 501
           Q LL +H   ++ ++HRD+K +NILL +    KLGDFG +K+Y    +        GT  
Sbjct: 151 QVLLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGDFGFSKMYAATVSDDVGRTFCGTPY 210

Query: 502 YLAPELTRTGKATTSTDVYSYGILMLEVACGRR 534
           Y+APE+ R    +   D++S G+L+ E+   +R
Sbjct: 211 YVAPEIWRRKPYSKKADMFSLGVLLYELLTLKR 243

Length = 496

>gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

 Score = 61.9 bits (150), Expect = 3e-10
 Identities = 50/192 (26%), Positives = 92/192 (47%), Gaps = 23/192 (11%)

Query: 356 LEVAIKRIGHNSQQGMK-EFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSL 414
           L VA+K +  ++ +  + +F+ E+  + RL+  N+++L G C  +D L ++ +Y+ NG L
Sbjct: 47  LLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRLLGVCVDEDPLCMITEYMENGDL 106

Query: 415 DKLL------------FDKDHKLRKLLTWDQRYKILIG----IAQSLLYLHEECNQRVVH 458
           ++ L             D       L      Y  L+     IA  + YL    +   VH
Sbjct: 107 NQFLSSHHLDDKEENGNDAVPPAHCLPA--ISYSSLLHVALQIASGMKYL---SSLNFVH 161

Query: 459 RDVKPSNILLDTYLNAKLGDFGLAK-IYEHGANPQTTHIVGTLGYLAPELTRTGKATTST 517
           RD+   N L+   L  K+ DFG+++ +Y           V  + ++A E    GK TT++
Sbjct: 162 RDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTAS 221

Query: 518 DVYSYGILMLEV 529
           DV+++G+ + E+
Sbjct: 222 DVWAFGVTLWEI 233

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304

>gnl|CDD|223069 PHA03390, pk1, serine/threonine-protein kinase 1; Provisional

 Score = 61.0 bits (149), Expect = 3e-10
 Identities = 43/163 (26%), Positives = 72/163 (44%), Gaps = 24/163 (14%)

Query: 374 FVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFD---KDHKLRKLLT 430
            V ++M      + N ++L+         +L+ DY+ +G L    FD   K+ KL +   
Sbjct: 60  MVHQLMK----DNPNFIKLYYSVTTLKGHVLIMDYIKDGDL----FDLLKKEGKLSEAEV 111

Query: 431 WDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLN-AKLGDFGLAKIYEHGA 489
                KI+  + ++L  LH      ++H D+K  N+L D   +   L D+GL KI     
Sbjct: 112 ----KKIIRQLVEALNDLH---KHNIIHNDIKLENVLYDRAKDRIYLCDYGLCKI-IG-- 161

Query: 490 NPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACG 532
               +   GTL Y +PE  +      S D ++ G+L  E+  G
Sbjct: 162 --TPSCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTG 202

Length = 267

>gnl|CDD|173722 cd05633, STKc_GRK3, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

 Score = 61.2 bits (148), Expect = 3e-10
 Identities = 61/218 (27%), Positives = 101/218 (46%), Gaps = 32/218 (14%)

Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWC 396
           ++G GGFG VY       G   A+K +    ++ +K    E +++      +LV   G C
Sbjct: 1   IIGRGGFGEVYGCRKADTGKMYAMKCL---DKKRIKMKQGETLALNERIMLSLVST-GDC 56

Query: 397 ----------RKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRY---KILIGIAQ 443
                        D+L  + D +  G L   L        K    + R+   +I++G   
Sbjct: 57  PFIVCMTYAFHTPDKLCFILDLMNGGDLHYHLSQHGVFSEK----EMRFYATEIILG--- 109

Query: 444 SLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYL 503
            L ++H   N+ VV+RD+KP+NILLD + + ++ D GLA  +     P  +  VGT GY+
Sbjct: 110 -LEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSK-KKPHAS--VGTHGYM 162

Query: 504 APELTRTGKA-TTSTDVYSYGILMLEVACGRRSIEPQK 540
           APE+ + G A  +S D +S G ++ ++  G       K
Sbjct: 163 APEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHK 200

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is widely expressed in many tissues. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 is involved in modulating the cholinergic response of airway smooth muscles. It also plays a role in dopamine receptor regulation. GRK3 promoter polymorphisms may be associated with bipolar disorder. Length = 279

>gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

 Score = 61.7 bits (150), Expect = 4e-10
 Identities = 61/215 (28%), Positives = 103/215 (47%), Gaps = 30/215 (13%)

Query: 335 QNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKE---FVAEIMSMGRLRHRNLVQ 391
           Q ++G G +G V   +    G +VAIK+I ++  + + +    + EI  +  LRH ++V+
Sbjct: 5   QEVIGKGSYGVVCSAIDTHTGEKVAIKKI-NDVFEHVSDATRILREIKLLRLLRHPDIVE 63

Query: 392 -----LHGWCRKQDELLLVYDYVPNGSLDKLLFDKD-HKLRKL---LTWDQRYKILIGIA 442
                L    R+  ++ +V++          L + D H++ K    LT +     L  + 
Sbjct: 64  IKHIMLPPSRREFKDIYVVFE----------LMESDLHQVIKANDDLTPEHHQFFLYQLL 113

Query: 443 QSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQT--THIVGTL 500
           ++L Y+H      V HRD+KP NIL +     K+ DFGLA++  +        T  V T 
Sbjct: 114 RALKYIH---TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATR 170

Query: 501 GYLAPELTRT--GKATTSTDVYSYGILMLEVACGR 533
            Y APEL  +   K T + D++S G +  EV  G+
Sbjct: 171 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGK 205

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338

>gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

 Score = 61.2 bits (148), Expect = 4e-10
 Identities = 43/152 (28%), Positives = 79/152 (51%), Gaps = 15/152 (9%)

Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIG--IAQSLL 446
           L QLH   +  D L  V +YV  G L        ++++++  + + + +     IA  L 
Sbjct: 63  LTQLHSCFQTMDRLYFVMEYVNGGDLM-------YQIQQVGRFKEPHAVFYAAEIAIGLF 115

Query: 447 YLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTH-IVGTLGYLAP 505
           +LH   ++ +++RD+K  N++LD+  + K+ DFG+ K  E+  +  TT    GT  Y+AP
Sbjct: 116 FLH---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCK--ENMWDGVTTKTFCGTPDYIAP 170

Query: 506 ELTRTGKATTSTDVYSYGILMLEVACGRRSIE 537
           E+        S D +++G+L+ E+  G+   E
Sbjct: 171 EIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFE 202

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323

>gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

 Score = 60.7 bits (147), Expect = 6e-10
 Identities = 58/204 (28%), Positives = 99/204 (48%), Gaps = 19/204 (9%)

Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGR---LRHRN--LVQ 391
           ++G G FG+V    +   G   A+K +  +    + + V   M   R   L   N  L  
Sbjct: 2   VLGKGSFGKVLLAELKGKGEYFAVKALKKDVVL-IDDDVECTMVEKRVLALAWENPFLTH 60

Query: 392 LHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRY--KILIGIAQSLLYLH 449
           L+   + ++ L  V +++  G L   +F    K R  L     Y  +I+ G    L +LH
Sbjct: 61  LYCTFQTKEHLFFVMEFLNGGDL---MFHIQDKGRFDLYRATFYAAEIVCG----LQFLH 113

Query: 450 EECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTR 509
              ++ +++RD+K  N++LD   + K+ DFG+ K    G N  +T   GT  Y+APE+ +
Sbjct: 114 ---SKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRAST-FCGTPDYIAPEILQ 169

Query: 510 TGKATTSTDVYSYGILMLEVACGR 533
             K T S D +S+G+L+ E+  G+
Sbjct: 170 GLKYTFSVDWWSFGVLLYEMLIGQ 193

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316

>gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

 Score = 60.4 bits (147), Expect = 6e-10
 Identities = 54/203 (26%), Positives = 88/203 (43%), Gaps = 30/203 (14%)

Query: 339 GSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVA--EIMSMGRLR-HRNLVQLHGW 395
           G G F  V +      G   AIK +     + +++     EI ++ RL  H N+++L   
Sbjct: 8   GEGTFSEVLKAQSRKTGKYYAIKCM-KKHFKSLEQVNNLREIQALRRLSPHPNILRLI-- 64

Query: 396 CRKQDELLLVYDYVPNGSL-------DKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYL 448
                E+L  +D    G L       D  L++     ++ L   +    +  + +SL ++
Sbjct: 65  -----EVL--FD-RKTGRLALVFELMDMNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHM 116

Query: 449 HEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IYEHGANPQTTHIVGTLGYLAPE- 506
           H      + HRD+KP NIL+   +  KL DFG  + IY     P T +I  T  Y APE 
Sbjct: 117 HR---NGIFHRDIKPENILIKDDI-LKLADFGSCRGIYSKP--PYTEYI-STRWYRAPEC 169

Query: 507 LTRTGKATTSTDVYSYGILMLEV 529
           L   G      D+++ G +  E+
Sbjct: 170 LLTDGYYGPKMDIWAVGCVFFEI 192

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282

>gnl|CDD|143380 cd07875, STKc_JNK1, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

 Score = 60.8 bits (147), Expect = 7e-10
 Identities = 63/209 (30%), Positives = 96/209 (45%), Gaps = 23/209 (11%)

Query: 335 QNL--VGSGGFGRVYRGLMPSLGLEVAIKRIGH--NSQQGMKEFVAEIMSMGRLRHRNLV 390
           QNL  +GSG  G V       L   VAIK++     +Q   K    E++ M  + H+N++
Sbjct: 27  QNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII 86

Query: 391 QLHGWCRKQDELLLVYD-YVPNGSLDKLL-----FDKDHKLRKLLTWDQRYKILIGIAQS 444
            L      Q  L    D Y+    +D  L      + DH+    L     Y++L GI   
Sbjct: 87  GLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLL----YQMLCGIK-- 140

Query: 445 LLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLA 504
             +LH   +  ++HRD+KPSNI++ +    K+ DFGLA+    G +   T  V T  Y A
Sbjct: 141 --HLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRA 193

Query: 505 PELTRTGKATTSTDVYSYGILMLEVACGR 533
           PE+        + D++S G +M E+  G 
Sbjct: 194 PEVILGMGYKENVDIWSVGCIMGEMIKGG 222

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK1 specifically binds with JAMP (JNK1-associated membrane protein), which regulates the duration of JNK1 activity in response to stimuli. Specific JNK1 substrates include Itch and SG10, which are implicated in Th2 responses and airway inflammation, and microtubule dynamics and axodendritic length, respectively. Mice deficient in Jnk1 are protected against arthritis, obesity, type 2 diabetes, cardiac cell death, and non-alcoholic liver disease, suggesting that JNK1 may play roles in the pathogenesis of these diseases. Length = 364

>gnl|CDD|173688 cd05597, STKc_DMPK_like, Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

 Score = 60.6 bits (147), Expect = 7e-10
 Identities = 45/152 (29%), Positives = 73/152 (48%), Gaps = 14/152 (9%)

Query: 387 RNLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLL 446
           R +  LH   + ++ L LV DY   G L  LL   + +L + +   + Y     +A+ +L
Sbjct: 61  RWITNLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMA--RFY-----LAEMVL 113

Query: 447 YLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFG-LAKIYEHGANPQTTHIVGTLGYLAP 505
            +        VHRD+KP N+LLD   + +L DFG   ++   G   Q+   VGT  Y++P
Sbjct: 114 AIDSVHQLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGT-VQSNVAVGTPDYISP 172

Query: 506 ELTR-----TGKATTSTDVYSYGILMLEVACG 532
           E+ +      G+     D +S G+ M E+  G
Sbjct: 173 EILQAMEDGKGRYGPECDWWSLGVCMYEMLYG 204

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational expansion of a CTG repeat in the 3'-UTR of DMPK. DMPK is expressed in skeletal and cardiac muscles, and in central nervous tissues. The functional role of DMPK is not fully understood. It may play a role in the signal transduction and homeostasis of calcium. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKgamma is expressed in heart and skeletal muscles, unlike MRCKalpha and MRCKbeta, which are expressed ubiquitously. Length = 331

>gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

 Score = 59.9 bits (145), Expect = 9e-10
 Identities = 56/199 (28%), Positives = 91/199 (45%), Gaps = 14/199 (7%)

Query: 338 VGSGGFGRVY----RGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLH 393
           +G G FG+V     R       L+  I++    S+  +   +AE   + ++    +V L 
Sbjct: 1   IGKGSFGKVMQVRKRDTQRIYALK-TIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLK 59

Query: 394 GWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECN 453
              +  ++L LV  ++  G L    F   H L++   +D   +     A+ L  L     
Sbjct: 60  FSFQSPEKLYLVLAFINGGEL----F---HHLQREGRFDL-SRARFYTAELLCALENLHK 111

Query: 454 QRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKA 513
             V++RD+KP NILLD   +  L DFGL K+     + +T    GT  YLAPEL      
Sbjct: 112 FNVIYRDLKPENILLDYQGHIALCDFGLCKL-NMKDDDKTNTFCGTPEYLAPELLLGHGY 170

Query: 514 TTSTDVYSYGILMLEVACG 532
           T + D ++ G+L+ E+  G
Sbjct: 171 TKAVDWWTLGVLLYEMLTG 189

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312

>gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

 Score = 60.0 bits (145), Expect = 1e-09
 Identities = 58/212 (27%), Positives = 95/212 (44%), Gaps = 37/212 (17%)

Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGM--KEFVAEIMSMGRLRHRNLVQLHGW 395
           VGSG +G V   L    G +VAIK++    Q  +  K    E+  +  ++H N++ L   
Sbjct: 23  VGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGL--- 79

Query: 396 CRKQDELLLVYDYVPNGSLDKLL------------FDKDHKLRKLLTWDQRYKILI-GIA 442
                    +  + P+ SLD+                K  K  KL   + R + L+  + 
Sbjct: 80  ---------LDVFTPDLSLDRFHDFYLVMPFMGTDLGKLMKHEKL--SEDRIQFLVYQML 128

Query: 443 QSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGY 502
           + L Y+H      ++HRD+KP N+ ++     K+ DFGLA+      + + T  V T  Y
Sbjct: 129 KGLKYIHA---AGIIHRDLKPGNLAVNEDCELKILDFGLAR----QTDSEMTGYVVTRWY 181

Query: 503 LAPELTRTGKATTST-DVYSYGILMLEVACGR 533
            APE+       T T D++S G +M E+  G+
Sbjct: 182 RAPEVILNWMHYTQTVDIWSVGCIMAEMLTGK 213

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343

>gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

 Score = 59.2 bits (143), Expect = 1e-09
 Identities = 35/92 (38%), Positives = 56/92 (60%), Gaps = 4/92 (4%)

Query: 442 AQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLG 501
           A+ +L L    N+ VV+RD+KP+NILLD + + ++ D GLA  +     P  +  VGT G
Sbjct: 104 AEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSK-KKPHAS--VGTHG 160

Query: 502 YLAPELTRTGKA-TTSTDVYSYGILMLEVACG 532
           Y+APE+ + G A  +S D +S G ++ ++  G
Sbjct: 161 YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 192

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278

>gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

 Score = 59.3 bits (143), Expect = 1e-09
 Identities = 61/211 (28%), Positives = 101/211 (47%), Gaps = 27/211 (12%)

Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIG--HNSQQGMKEFVAEIMSMGRLR-HRNLVQLHG 394
           +G G +G+V++ L    G + A+K +   H+  +   E  AE   +  L  H N+V+ +G
Sbjct: 26  IGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDE---EIEAEYNILKALSDHPNVVKFYG 82

Query: 395 WCRKQD-----ELLLVYDYVPNGSLDKL---LFDKDHKLRKLLTWDQRYKILIGIAQSLL 446
              K+D     +L LV +    GS+  L      +  ++ + +     ++ L+G    L 
Sbjct: 83  MYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMG----LQ 138

Query: 447 YLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPE 506
           +LH     + +HRDVK +NILL T    KL DFG++         + T  VGT  ++APE
Sbjct: 139 HLH---VNKTIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLRRNTS-VGTPFWMAPE 194

Query: 507 LTRTGKATTST-----DVYSYGILMLEVACG 532
           +    +   ST     DV+S GI  +E+  G
Sbjct: 195 VIACEQQLDSTYDARCDVWSLGITAIELGDG 225

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286

>gnl|CDD|173651 cd05095, PTKc_DDR2, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

 Score = 58.8 bits (142), Expect = 2e-09
 Identities = 46/182 (25%), Positives = 88/182 (48%), Gaps = 15/182 (8%)

Query: 358 VAIKRIGHNSQQGMK-EFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSLDK 416
           VA+K +  ++ +  + +F+ EI  M RL+  N+++L   C   D L ++ +Y+ NG L++
Sbjct: 49  VAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRLLAVCITSDPLCMITEYMENGDLNQ 108

Query: 417 LLFDKDHKLRKLLTWDQRYKILIG--------IAQSLLYLHEECNQRVVHRDVKPSNILL 468
            L    H+ ++         I           IA  + YL    +   VHRD+   N L+
Sbjct: 109 FL--SRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYL---SSLNFVHRDLATRNCLV 163

Query: 469 DTYLNAKLGDFGLAK-IYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILML 527
                 K+ DFG+++ +Y           V  + +++ E    GK TT++DV+++G+ + 
Sbjct: 164 GKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLW 223

Query: 528 EV 529
           E+
Sbjct: 224 EI 225

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues with the highest levels found in skeletal muscle, skin, kidney and lung. It is important in cell proliferation and development. Mice, with a deletion of DDR2, suffer from dwarfism and delayed healing of epidermal wounds. DDR2 also contributes to collagen (type I) regulation by inhibiting fibrillogenesis and altering the morphology of collagen fibers. It is also expressed in immature dendritic cells (DCs), where it plays a role in DC activation and function. Length = 296

>gnl|CDD|143379 cd07874, STKc_JNK3, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

 Score = 58.9 bits (142), Expect = 3e-09
 Identities = 60/205 (29%), Positives = 94/205 (45%), Gaps = 23/205 (11%)

Query: 335 QNL--VGSGGFGRVYRGLMPSLGLEVAIKRIGH--NSQQGMKEFVAEIMSMGRLRHRNLV 390
           QNL  +GSG  G V       L   VAIK++     +Q   K    E++ M  + H+N++
Sbjct: 20  QNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII 79

Query: 391 QLHGWCRKQDEL------LLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQS 444
            L      Q  L       LV + +       +  + DH+    L     Y++L GI   
Sbjct: 80  SLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLL----YQMLCGIK-- 133

Query: 445 LLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLA 504
             +LH   +  ++HRD+KPSNI++ +    K+ DFGLA+    G +   T  V T  Y A
Sbjct: 134 --HLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRA 186

Query: 505 PELTRTGKATTSTDVYSYGILMLEV 529
           PE+        + D++S G +M E+
Sbjct: 187 PEVILGMGYKENVDIWSVGCIMGEM 211

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. Length = 355

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score = 58.7 bits (142), Expect = 3e-09
 Identities = 44/145 (30%), Positives = 73/145 (50%), Gaps = 15/145 (10%)

Query: 393 HGWCRKQ--DELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRY--KILIGIAQSLLYL 448
           H +C  Q  + L  V +Y+  G L   +F      R      + Y  +I+ G    L +L
Sbjct: 60  HLFCTFQTKEHLFFVMEYLNGGDL---MFHIQSSGRFDEARARFYAAEIICG----LQFL 112

Query: 449 HEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELT 508
           H    + +++RD+K  N+LLD   + K+ DFG+ K   +G    +T   GT  Y+APE+ 
Sbjct: 113 H---KKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKAST-FCGTPDYIAPEIL 168

Query: 509 RTGKATTSTDVYSYGILMLEVACGR 533
           +  K   S D +S+G+L+ E+  G+
Sbjct: 169 KGQKYNESVDWWSFGVLLYEMLIGQ 193

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

 Score = 58.2 bits (141), Expect = 4e-09
 Identities = 46/153 (30%), Positives = 70/153 (45%), Gaps = 14/153 (9%)

Query: 382 GRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYK--ILI 439
              RH  LV L    + +D +  V +Y   G L   +        +       Y   +++
Sbjct: 57  NSERHPFLVNLFACFQTEDHVCFVMEYAAGGDLMMHIHTDVFSEPRA----VFYAACVVL 112

Query: 440 GIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGT 499
           G    L YLHE    ++V+RD+K  N+LLDT    K+ DFGL K    G   +T+   GT
Sbjct: 113 G----LQYLHE---NKIVYRDLKLDNLLLDTEGFVKIADFGLCK-EGMGFGDRTSTFCGT 164

Query: 500 LGYLAPELTRTGKATTSTDVYSYGILMLEVACG 532
             +LAPE+      T + D +  G+L+ E+  G
Sbjct: 165 PEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVG 197

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324

>gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

 Score = 57.4 bits (139), Expect = 6e-09
 Identities = 53/227 (23%), Positives = 92/227 (40%), Gaps = 39/227 (17%)

Query: 332 FGEQNLVGSGGFGRV----------YRGLMPSLGLE------VAIKRIGHN-SQQGMKEF 374
           F E+   G G FG V          +     +          VA+K +  + S    ++F
Sbjct: 9   FVEKL--GEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDF 66

Query: 375 VAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSLDKLL-----FDKDHKLRKL- 428
           + E+  + RL   N+ +L G C     L ++ +Y+ NG L++ L                
Sbjct: 67  LKEVKILSRLSDPNIARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKS 126

Query: 429 LTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK----- 483
           L++     +   IA  + YL E  N   VHRD+   N L+      K+ DFG+++     
Sbjct: 127 LSFSTLLYMATQIASGMRYL-ESLN--FVHRDLATRNCLVGKNYTIKIADFGMSRNLYSS 183

Query: 484 -IYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEV 529
             Y              + ++A E    GK TT +DV+++G+ + E+
Sbjct: 184 DYYRVQGRA-----PLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEI 225

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296

>gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

 Score = 57.4 bits (139), Expect = 7e-09
 Identities = 51/194 (26%), Positives = 92/194 (47%), Gaps = 34/194 (17%)

Query: 358 VAIKRIGHNSQQGM--KEFVAEIMSMGRLR-HRNLVQLHGWCRKQDELLLVYDYVPNGS- 413
           VAIK+I +   + +  K  + E+  +   R H+N+  L+       ++ +V+    N   
Sbjct: 30  VAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLY-------DMDIVFPGNFNELY 82

Query: 414 LDKLLFDKDHKLRKLLTWDQR----------YKILIGIAQSLLYLHEECNQRVVHRDVKP 463
           L + L + D  L +++   Q           Y+IL G    L Y+H   +  V+HRD+KP
Sbjct: 83  LYEELMEAD--LHQIIRSGQPLTDAHFQSFIYQILCG----LKYIH---SANVLHRDLKP 133

Query: 464 SNILLDTYLNAKLGDFGLAKIYEHGANPQTTHI---VGTLGYLAPELTRTGKA-TTSTDV 519
            N+L++     K+ DFGLA+ +          +   V T  Y APE+  + ++ T + DV
Sbjct: 134 GNLLVNADCELKICDFGLARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDV 193

Query: 520 YSYGILMLEVACGR 533
           +S G ++ E+   +
Sbjct: 194 WSVGCILAELLGRK 207

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332

>gnl|CDD|88524 cd05623, STKc_MRCK_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

 Score = 57.8 bits (139), Expect = 7e-09
 Identities = 49/150 (32%), Positives = 75/150 (50%), Gaps = 14/150 (9%)

Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYL 448
           +  LH   + ++ L LV DY   G L  LL   + +L + +      +++I I  S+  L
Sbjct: 63  ITTLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAI-DSVHQL 121

Query: 449 HEECNQRVVHRDVKPSNILLDTYLNAKLGDFG-LAKIYEHGANPQTTHIVGTLGYLAPEL 507
           H       VHRD+KP NIL+D   + +L DFG   K+ E G   Q++  VGT  Y++PE+
Sbjct: 122 H------YVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDG-TVQSSVAVGTPDYISPEI 174

Query: 508 TRT-----GKATTSTDVYSYGILMLEVACG 532
            +      GK     D +S G+ M E+  G
Sbjct: 175 LQAMEDGKGKYGPECDWWSLGVCMYEMLYG 204

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathway. Length = 332

>gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

 Score = 57.3 bits (139), Expect = 8e-09
 Identities = 63/233 (27%), Positives = 99/233 (42%), Gaps = 47/233 (20%)

Query: 337 LVGSGGFGRVY----RGLMPSLGLEVAIKR--IGHNSQQGMKEFVAEIMSMGRLRHRNLV 390
           L+G G  GRV+    +G      L+V  K+  I  N  + +     EI++   L H  L 
Sbjct: 8   LLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRV-LTEQEILA--TLDHPFLP 64

Query: 391 QLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWD--QRYKILIGIAQSLLYL 448
            L+   + +  L LV DY P G L +LL     +  K L+ +  + Y   + +A  L YL
Sbjct: 65  TLYASFQTETYLCLVMDYCPGGELFRLL---QRQPGKCLSEEVARFYAAEVLLA--LEYL 119

Query: 449 HEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK--------IYEHGANP--------- 491
           H      +V+RD+KP NILL    +  L DF L+K        + +              
Sbjct: 120 H---LLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSI 176

Query: 492 -----------QTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGR 533
                      ++   VGT  Y+APE+       ++ D ++ GIL+ E+  G 
Sbjct: 177 PSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGT 229

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316

>gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

 Score = 57.6 bits (139), Expect = 8e-09
 Identities = 57/211 (27%), Positives = 96/211 (45%), Gaps = 34/211 (16%)

Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGM--KEFVAEIMSMGRLRHRNLVQLHG 394
            VGSG +G V   +    G +VAIK++    Q  +  K    E+  +  ++H N++   G
Sbjct: 22  QVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVI---G 78

Query: 395 WCRKQ---------DELLLVYDYVPNGSLDKLLFDK--DHKLRKLLTWDQRYKILIGIAQ 443
                          +  LV  Y+    L K++     + K++ L+     Y++L G   
Sbjct: 79  LLDVFTSAVSGDEFQDFYLVMPYMQT-DLQKIMGHPLSEDKVQYLV-----YQMLCG--- 129

Query: 444 SLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYL 503
            L Y+H      ++HRD+KP N+ ++     K+ DFGLA+     A+ + T  V T  Y 
Sbjct: 130 -LKYIHS---AGIIHRDLKPGNLAVNEDCELKILDFGLAR----HADAEMTGYVVTRWYR 181

Query: 504 APELTRTGKATTST-DVYSYGILMLEVACGR 533
           APE+         T D++S G +M E+  G+
Sbjct: 182 APEVILNWMHYNQTVDIWSVGCIMAEMLTGK 212

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342

>gnl|CDD|177557 PHA03209, PHA03209, serine/threonine kinase US3; Provisional

 Score = 56.8 bits (137), Expect = 1e-08
 Identities = 34/101 (33%), Positives = 50/101 (49%), Gaps = 5/101 (4%)

Query: 429 LTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHG 488
           L  DQ   I   I + L YLH    QR++HRDVK  NI ++      +GD G A+     
Sbjct: 154 LPIDQALIIEKQILEGLRYLHA---QRIIHRDVKTENIFINDVDQVCIGDLGAAQF--PV 208

Query: 489 ANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEV 529
             P    + GT+   APE+    K  +  D++S GI++ E+
Sbjct: 209 VAPAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEM 249

Length = 357

>gnl|CDD|173715 cd05626, STKc_LATS2, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

 Score = 56.9 bits (137), Expect = 2e-08
 Identities = 51/219 (23%), Positives = 89/219 (40%), Gaps = 55/219 (25%)

Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYL 448
           +V+L+   + +D L  V DY+P G +  LL        ++  + +       IA+  L +
Sbjct: 63  VVKLYYSFQDKDNLYFVMDYIPGGDMMSLLI-------RMEVFPEVLARFY-IAELTLAI 114

Query: 449 HEECNQRVVHRDVKPSNILLDTYLNAKLGDFGL---------AKIYEHGAN--------- 490
                   +HRD+KP NIL+D   + KL DFGL         +K Y+ G++         
Sbjct: 115 ESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPS 174

Query: 491 ---------------------PQTTH-------IVGTLGYLAPELTRTGKATTSTDVYSY 522
                                    H       +VGT  Y+APE+      T   D +S 
Sbjct: 175 DLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSV 234

Query: 523 GILMLEVACGRRS-IEPQKAAAELLLVDWVKELHLEGEI 560
           G+++ E+  G+   + P     +L +++W   LH+  ++
Sbjct: 235 GVILFEMLVGQPPFLAPTPTETQLKVINWENTLHIPPQV 273

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with poor prognosis in acute lymphoblastic leukemia and breast cancer. Length = 381

>gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

 Score = 55.9 bits (135), Expect = 3e-08
 Identities = 62/210 (29%), Positives = 97/210 (46%), Gaps = 25/210 (11%)

Query: 335 QNL--VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGM--KEFVAEIMSMGRLRHRNLV 390
           QNL  +GSG  G V        G  VAIK++    Q     K    E++ M  + H+N++
Sbjct: 19  QNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNII 78

Query: 391 QLHGWCRKQ------DELLLVYDYVPNGSLDKLLFDKDHK-LRKLLTWDQRYKILIGIAQ 443
            L      Q       ++ LV + +       +  D DH+ +  LL     Y++L GI  
Sbjct: 79  GLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHERMSYLL-----YQMLCGIK- 132

Query: 444 SLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYL 503
              +LH   +  ++HRD+KPSNI++ +    K+ DFGLA+    G +   T  V T  Y 
Sbjct: 133 ---HLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYR 184

Query: 504 APELTRTGKATTSTDVYSYGILMLEVACGR 533
           APE+        + D++S G +M E+  G 
Sbjct: 185 APEVILGMGYKENVDIWSVGCIMGEMIRGT 214

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353

>gnl|CDD|173502 PTZ00266, PTZ00266, NIMA-related protein kinase; Provisional

 Score = 56.7 bits (136), Expect = 4e-08
 Identities = 54/201 (26%), Positives = 93/201 (46%), Gaps = 41/201 (20%)

Query: 367 SQQGMKE-----FVAEIMSMGRLRHRNLVQ-LHGWCRKQDE-LLLVYDYVPNGSLDKLLF 419
           S +G+KE      V E+  M  L+H+N+V+ +  +  K ++ L ++ ++   G L + + 
Sbjct: 47  SYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLYILMEFCDAGDLSRNI- 105

Query: 420 DKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECN--------QRVVHRDVKPSNILLDTY 471
               K  K+    + + I + I + LL+    C+        +RV+HRD+KP NI L T 
Sbjct: 106 ---QKCYKMFGKIEEHAI-VDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTG 161

Query: 472 LN-----------------AKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELT--RTGK 512
           +                  AK+GDFGL+K    G        VGT  Y +PEL    T  
Sbjct: 162 IRHIGKITAQANNLNGRPIAKIGDFGLSK--NIGIESMAHSCVGTPYYWSPELLLHETKS 219

Query: 513 ATTSTDVYSYGILMLEVACGR 533
               +D+++ G ++ E+  G+
Sbjct: 220 YDDKSDMWALGCIIYELCSGK 240

Length = 1021

>gnl|CDD|173712 cd05622, STKc_ROCK1, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

 Score = 54.3 bits (130), Expect = 9e-08
 Identities = 42/140 (30%), Positives = 66/140 (47%), Gaps = 15/140 (10%)

Query: 399 QDE--LLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRV 456
           QD+  L +V +Y+P G L  L+ + D   +    W + Y      A+ +L L    +   
Sbjct: 113 QDDRYLYMVMEYMPGGDLVNLMSNYDVPEK----WARFYT-----AEVVLALDAIHSMGF 163

Query: 457 VHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRT----GK 512
           +HRDVKP N+LLD   + KL DFG           +    VGT  Y++PE+ ++    G 
Sbjct: 164 IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGY 223

Query: 513 ATTSTDVYSYGILMLEVACG 532
                D +S G+ + E+  G
Sbjct: 224 YGRECDWWSVGVFLYEMLVG 243

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, and kidney. It mediates signaling from Rho to the actin cytoskeleton. It is implicated in the development of cardiac fibrosis, cardiomyocyte apoptosis, and hyperglycemia. Mice deficient with ROCK1 display eyelids open at birth (EOB) and omphalocele phenotypes due to the disorganization of actin filaments in the eyelids and the umbilical ring. Length = 371

>gnl|CDD|133205 cd05074, PTKc_Tyro3, Catalytic domain of the Protein Tyrosine Kinase, Tyro3

 Score = 53.0 bits (127), Expect = 1e-07
 Identities = 53/207 (25%), Positives = 94/207 (45%), Gaps = 16/207 (7%)

Query: 337 LVGSGGFGRVYRGLMPS---LGLEVAIKRIGH--NSQQGMKEFVAEIMSMGRLRHRNLVQ 391
           ++G G FG V    + S      +VA+K +     S   ++EF+ E   M    H N+++
Sbjct: 6   MLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIK 65

Query: 392 LHGWC---RKQDEL---LLVYDYVPNGSLDK-LLFDKDHKLRKLLTWDQRYKILIGIAQS 444
           L G     R +  L   +++  ++ +G L   LL  +  +    L      + +I IA  
Sbjct: 66  LIGVSLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASG 125

Query: 445 LLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLA-KIYEHGANPQTTHIVGTLGYL 503
           + YL    ++  +HRD+   N +L+  +   + DFGL+ KIY      Q       + +L
Sbjct: 126 MEYLS---SKNFIHRDLAARNCMLNENMTVCVADFGLSKKIYSGDYYRQGCASKLPVKWL 182

Query: 504 APELTRTGKATTSTDVYSYGILMLEVA 530
           A E       TT +DV+++G+ M E+ 
Sbjct: 183 ALESLADNVYTTHSDVWAFGVTMWEIM 209

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic factor. It is also expressed in osteoclasts and has a role in bone resorption. Length = 273

>gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 53.5 bits (129), Expect = 1e-07
 Identities = 51/185 (27%), Positives = 73/185 (39%), Gaps = 55/185 (29%)

Query: 390 VQLHGWCRKQDE--LLLVYDYVPNGSLDKLLFDKDHKLRKLLTWD--QRYKILIGIAQSL 445
           V+L  +   QDE  L L+ +Y+P G +  LL  KD       T +  + Y     IA+++
Sbjct: 64  VKL--YYSFQDENYLYLIMEYLPGGDMMTLLMKKD-----TFTEEETRFY-----IAETI 111

Query: 446 LYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK------------IYEH---GAN 490
           L +        +HRD+KP N+LLD   + KL DFGL              I  H      
Sbjct: 112 LAIDSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFYRILSHALPSNF 171

Query: 491 PQTTH----------------------IVGTLGYLAPE-LTRTGKATTSTDVYSYGILML 527
                                       VGT  Y+APE   +TG      D +S G++M 
Sbjct: 172 LDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTG-YNKECDWWSLGVIMY 230

Query: 528 EVACG 532
           E+  G
Sbjct: 231 EMLVG 235

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364

>gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

 Score = 53.2 bits (128), Expect = 2e-07
 Identities = 35/103 (33%), Positives = 50/103 (48%), Gaps = 17/103 (16%)

Query: 444 SLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKI---------YEHGANPQT- 493
           +L YLH   N  +VHRD+KP N+L+ +  + KL DFGL+KI         YE      T 
Sbjct: 113 ALEYLH---NYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNLYEGHIEKDTR 169

Query: 494 ----THIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACG 532
                 + GT  Y+APE+          D ++ GI++ E   G
Sbjct: 170 EFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVG 212

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305

>gnl|CDD|173716 cd05627, STKc_NDR2, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

 Score = 53.5 bits (128), Expect = 2e-07
 Identities = 67/243 (27%), Positives = 96/243 (39%), Gaps = 55/243 (22%)

Query: 332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQ 391
           F    ++G G FG V        G   A+K I   +    KE VA I    R     LV+
Sbjct: 3   FESLKVIGRGAFGEVRLVQKKDTGHIYAMK-ILRKADMLEKEQVAHI----RAERDILVE 57

Query: 392 LHG-WCRK-----QDE--LLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQ 443
             G W  K     QD+  L L+ +++P G +  LL  KD  L +  T  Q Y     IA+
Sbjct: 58  ADGAWVVKMFYSFQDKRNLYLIMEFLPGGDMMTLLMKKD-TLSEEAT--QFY-----IAE 109

Query: 444 SLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGL---------------------- 481
           ++L +        +HRD+KP N+LLD   + KL DFGL                      
Sbjct: 110 TVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPS 169

Query: 482 ------------AKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEV 529
                       A+ ++          VGT  Y+APE+          D +S G++M E+
Sbjct: 170 DFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEM 229

Query: 530 ACG 532
             G
Sbjct: 230 LIG 232

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regulating neuronal growth and differentiation, as well as in facilitating neurite outgrowth. It is also implicated in fear conditioning as it contributes to the coupling of neuronal morphological changes with fear-memory consolidation. NDR2 is also referred to as STK38-like. Length = 360

>gnl|CDD|173714 cd05625, STKc_LATS1, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

 Score = 53.1 bits (127), Expect = 2e-07
 Identities = 57/226 (25%), Positives = 90/226 (39%), Gaps = 77/226 (34%)

Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLL-- 446
           +V+L+   + +D L  V DY+P G +  LL                  I +GI    L  
Sbjct: 63  VVRLYYSFQDKDNLYFVMDYIPGGDMMSLL------------------IRMGIFPEDLAR 104

Query: 447 -YLHE-----ECNQRV--VHRDVKPSNILLDTYLNAKLGDFGL---------AKIYEHGA 489
            Y+ E     E   ++  +HRD+KP NIL+D   + KL DFGL         +K Y+ G 
Sbjct: 105 FYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQSGD 164

Query: 490 NPQTT-------------------------------------HIVGTLGYLAPE-LTRTG 511
           + +                                        +VGT  Y+APE L RTG
Sbjct: 165 HVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTG 224

Query: 512 KATTSTDVYSYGILMLEVACGRRSIEPQKA-AAELLLVDWVKELHL 556
             T   D +S G+++ E+  G+     Q     ++ +++W   LH+
Sbjct: 225 -YTQLCDWWSVGVILYEMLVGQPPFLAQTPLETQMKVINWQTSLHI 269

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype and poor prognosis. LATS1 induces G2 arrest and promotes cytokinesis. It may be a component of the mitotic exit network in higher eukaryotes. Length = 382

>gnl|CDD|223009 PHA03211, PHA03211, serine/threonine kinase US3; Provisional

 Score = 52.6 bits (126), Expect = 4e-07
 Identities = 33/96 (34%), Positives = 52/96 (54%), Gaps = 10/96 (10%)

Query: 441 IAQSLL----YLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTH- 495
           +A+ LL    Y+H E    ++HRD+K  N+L++   +  LGDFG A  +  G+     H 
Sbjct: 265 VARQLLSAIDYIHGE---GIIHRDIKTENVLVNGPEDICLGDFG-AACFARGSWSTPFHY 320

Query: 496 -IVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVA 530
            I GT+   APE+      T S D++S G+++ E A
Sbjct: 321 GIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAA 356

Length = 461

>gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

 Score = 52.0 bits (124), Expect = 5e-07
 Identities = 58/211 (27%), Positives = 102/211 (48%), Gaps = 27/211 (12%)

Query: 335 QNL--VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGM--KEFVAEIMSMGRLRHRNLV 390
           QNL  VGSG +G V       L  +VA+K++    Q  +  +    E+  +  ++H N++
Sbjct: 18  QNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVI 77

Query: 391 QL------HGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILI-GIAQ 443
            L             +E+ LV + +    L+ ++     K +KL   D+  + LI  + +
Sbjct: 78  GLLDVFTPATSIENFNEVYLVTNLM-GADLNNIV-----KCQKLS--DEHVQFLIYQLLR 129

Query: 444 SLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYL 503
            L Y+H   +  ++HRD+KPSN+ ++     ++ DFGLA+     A+ + T  V T  Y 
Sbjct: 130 GLKYIH---SAGIIHRDLKPSNVAVNEDCELRILDFGLAR----QADDEMTGYVATRWYR 182

Query: 504 APELTRTGKATTST-DVYSYGILMLEVACGR 533
           APE+         T D++S G +M E+  G+
Sbjct: 183 APEIMLNWMHYNQTVDIWSVGCIMAELLKGK 213

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343

>gnl|CDD|165478 PHA03212, PHA03212, serine/threonine kinase US3; Provisional

 Score = 51.5 bits (123), Expect = 9e-07
 Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 5/97 (5%)

Query: 441 IAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTH-IVGT 499
           + +++ YLH     R++HRD+K  NI ++   +  LGDFG A  +    N    +   GT
Sbjct: 191 VLRAIQYLH---ENRIIHRDIKAENIFINHPGDVCLGDFG-AACFPVDINANKYYGWAGT 246

Query: 500 LGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSI 536
           +   APEL        + D++S GI++ E+A    S+
Sbjct: 247 IATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSL 283

Length = 391

>gnl|CDD|173717 cd05628, STKc_NDR1, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

 Score = 50.8 bits (121), Expect = 1e-06
 Identities = 71/274 (25%), Positives = 108/274 (39%), Gaps = 60/274 (21%)

Query: 332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQ 391
           F    ++G G FG V        G   A+K I   +    KE V  I    R     LV+
Sbjct: 3   FESLKVIGRGAFGEVRLVQKKDTGHVYAMK-ILRKADMLEKEQVGHI----RAERDILVE 57

Query: 392 LHG-WCRK-----QDE--LLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQ 443
               W  K     QD+  L L+ +++P G +  LL  KD  L +  T  Q Y     IA+
Sbjct: 58  ADSLWVVKMFYSFQDKLNLYLIMEFLPGGDMMTLLMKKD-TLTEEET--QFY-----IAE 109

Query: 444 SLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGL---------------------- 481
           ++L +        +HRD+KP N+LLD+  + KL DFGL                      
Sbjct: 110 TVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPS 169

Query: 482 ------------AKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEV 529
                       A+ ++          VGT  Y+APE+          D +S G++M E+
Sbjct: 170 DFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEM 229

Query: 530 ACGRR---SIEPQKAAAELLLVDWVKELHLEGEI 560
             G     S  PQ+   +++  +W + L    E+
Sbjct: 230 LIGYPPFCSETPQETYKKVM--NWKETLIFPPEV 261

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, muscle, lung and spleen. It is not an essential protein because mice deficient of NDR1 remain viable and fertile. However, these mice develop T-cell lymphomas and appear to be hypersenstive to carcinogenic treatment. NDR1 appears to act as a tumor suppressor. NDR1 is also called STK38. Length = 363

>gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

 Score = 50.2 bits (120), Expect = 1e-06
 Identities = 33/98 (33%), Positives = 52/98 (53%), Gaps = 10/98 (10%)

Query: 435 YKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNA-KLGDFGLAKIYEHGANPQT 493
           Y++L G+A    + H+     V+HRD+KP N+L+D      K+ D GL + +       T
Sbjct: 117 YQLLKGVA----HCHK---HGVMHRDLKPQNLLVDKQKGLLKIADLGLGRAFSIPVKSYT 169

Query: 494 THIVGTLGYLAPE-LTRTGKATTSTDVYSYGILMLEVA 530
             IV TL Y APE L  +   +T  D++S G +  E++
Sbjct: 170 HEIV-TLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMS 206

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295

>gnl|CDD|133207 cd05076, PTK_Tyk2_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 49.5 bits (118), Expect = 2e-06
 Identities = 46/159 (28%), Positives = 78/159 (49%), Gaps = 24/159 (15%)

Query: 381 MGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIG 440
           M ++ H +L  +HG C +  E ++V ++V +G LD  L  +  K R  + W    KI + 
Sbjct: 70  MSQVSHIHLAFVHGVCVRGSENIMVEEFVEHGPLDVCL--RKEKGRVPVAW----KITVA 123

Query: 441 --IAQSLLYLHEECNQRVVHRDVKPSNILL-------DTYLNAKLGDFGLAKIYEHGANP 491
             +A +L YL    ++ +VH +V   NILL        T    KL D G++      A  
Sbjct: 124 QQLASALSYLE---DKNLVHGNVCAKNILLARLGLAEGTSPFIKLSDPGVS----FTALS 176

Query: 492 QTTHIVGTLGYLAPELTRTGKA-TTSTDVYSYGILMLEV 529
           +    V  + ++APE    G + +T+ D +S+G  +LE+
Sbjct: 177 REER-VERIPWIAPECVPGGNSLSTAADKWSFGTTLLEI 214

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 274

>gnl|CDD|133237 cd05106, PTKc_CSF-1R, Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

 Score = 49.5 bits (118), Expect = 4e-06
 Identities = 31/94 (32%), Positives = 51/94 (54%), Gaps = 12/94 (12%)

Query: 441 IAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVG-- 498
           +AQ + +L    ++  +HRDV   N+LL     AK+ DFGLA+   + +N    ++V   
Sbjct: 221 VAQGMDFL---ASKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSN----YVVKGN 273

Query: 499 ---TLGYLAPELTRTGKATTSTDVYSYGILMLEV 529
               + ++APE       T  +DV+SYGIL+ E+
Sbjct: 274 ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI 307

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. It leads to increases in gene transcription and protein translation, and induces cytoskeletal remodeling. CSF-1R signaling leads to a variety of cellular responses including survival, proliferation, and differentiation of target cells. It plays an important role in innate immunity, tissue development and function, and the pathogenesis of some diseases including atherosclerosis and cancer. CSF-1R signaling is also implicated in mammary gland development during pregnancy and lactation. Aberrant CSF-1/CSF-1R expression correlates with tumor cell invasiveness, poor clinical prognosis, and bone metastasis in breast cancer. Although the structure of the human CSF-1R catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 374

>gnl|CDD|133217 cd05086, PTKc_Aatyk2, Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

 Score = 48.3 bits (115), Expect = 5e-06
 Identities = 49/204 (24%), Positives = 88/204 (43%), Gaps = 17/204 (8%)

Query: 338 VGSGGFGRVYRG--LMPSLGLEVAIKRIGHN-SQQGMKEFVAEIMSMGRLRHRNLVQLHG 394
           +G+G FG+V        +    V +K +  N S +   EF+ +      L+H N++Q  G
Sbjct: 3   IGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLG 62

Query: 395 WCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQ 454
            C +    LLV++Y   G L   L  +    R         ++   IA  + ++H+    
Sbjct: 63  QCVEAIPYLLVFEYCELGDLKSYLSQEQWHRRNSQLL-LLQRMACEIAAGVTHMHK---H 118

Query: 455 RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTH--IVGTLGYLAPELTR--- 509
             +H D+   N  L + L  K+GD+G+     +  +   T       L +LAPEL     
Sbjct: 119 NFLHSDLALRNCFLTSDLTVKVGDYGIG-PSRYKEDYIETEDDKCVPLRWLAPELVGEFH 177

Query: 510 ----TGKATTSTDVYSYGILMLEV 529
               T + T  ++V++ G+ + E+
Sbjct: 178 GGLITAEQTKPSNVWALGVTLWEL 201

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage spermatogenesis. Although it is classified as a tyr kinase based on sequence similarity and the phylogenetic tree, Aatyk2 has been characterized as a serine/threonine kinase. Length = 268

>gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

 Score = 48.3 bits (115), Expect = 1e-05
 Identities = 42/155 (27%), Positives = 72/155 (46%), Gaps = 27/155 (17%)

Query: 341 GGFGRVYRGLMPSLGLEVAIK------RIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHG 394
           G FG+VY G   +     A+K       I  N    ++   AE  ++   +   +V L+ 
Sbjct: 15  GAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQ---AERDALALSKSPFIVHLYY 71

Query: 395 WCRKQDELLLVYDYVPNGSLDKLL-----FDKDHKLRKLLTWDQRYKILIGIAQSLLYLH 449
             +  + + LV +Y+  G +  LL     FD++  +          K +  +A +L YLH
Sbjct: 72  SLQSANNVYLVMEYLIGGDVKSLLHIYGYFDEEMAV----------KYISEVALALDYLH 121

Query: 450 EECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKI 484
                 ++HRD+KP N+L+    + KL DFGL+K+
Sbjct: 122 R---HGIIHRDLKPDNMLISNEGHIKLTDFGLSKV 153

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669

>gnl|CDD|173643 cd05077, PTK_Jak1_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 47.2 bits (112), Expect = 1e-05
 Identities = 45/160 (28%), Positives = 81/160 (50%), Gaps = 17/160 (10%)

Query: 377 EIMSMGR-LRHRNLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRY 435
           E  SM R + H+++V L+G C +  E ++V ++V  G LD  +    H+   +LT   ++
Sbjct: 53  ETASMMRQVSHKHIVLLYGVCVRDVENIMVEEFVEFGPLDLFM----HRKSDVLTTPWKF 108

Query: 436 KILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTY-LNAKLGDFGLAKIYEHGANPQTT 494
           K+   +A +L YL +   + +VH +V   NILL    ++ + G F   K+ + G  P T 
Sbjct: 109 KVAKQLASALSYLED---KDLVHGNVCTKNILLAREGIDGECGPF--IKLSDPGI-PITV 162

Query: 495 ----HIVGTLGYLAPELTRTGKA-TTSTDVYSYGILMLEV 529
                 V  + ++APE     K  + + D +S+G  + E+
Sbjct: 163 LSRQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEI 202

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 262

>gnl|CDD|143373 cd07868, STKc_CDK8, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

 Score = 47.4 bits (112), Expect = 1e-05
 Identities = 53/208 (25%), Positives = 92/208 (44%), Gaps = 23/208 (11%)

Query: 338 VGSGGFGRVYRGLMP--SLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHG- 394
           VG G +G VY+          + A+K+I   +   M     EI  +  L+H N++ L   
Sbjct: 9   VGRGTYGHVYKAKRKDGKDDRDYALKQI-EGTGISMSA-CREIALLRELKHPNVISLQKV 66

Query: 395 -WCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLY-----L 448
                  ++ L++DY  +     + F +  K  K     +  ++  G+ +SLLY     +
Sbjct: 67  FLSHADRKVWLLFDYAEHDLWHIIKFHRASKANK-----KPVQLPRGMVKSLLYQILDGI 121

Query: 449 HEECNQRVVHRDVKPSNILL----DTYLNAKLGDFGLAKIYEHGANP--QTTHIVGTLGY 502
           H      V+HRD+KP+NIL+          K+ D G A+++     P      +V T  Y
Sbjct: 122 HYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWY 181

Query: 503 LAPELTRTGKA-TTSTDVYSYGILMLEV 529
            APEL    +  T + D+++ G +  E+
Sbjct: 182 RAPELLLGARHYTKAIDIWAIGCIFAEL 209

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDK8 phosphorylates cyclin H, a subunit of the general transcription factor TFIIH, which results in the inhibition of TFIIH-dependent phosphorylation of the C-terminal domain (CTD) of RNAP II, facilitating the inhibition of transcription. It has also been shown to promote transcription by a mechanism that is likely to involve RNAP II phosphorylation. CDK8 also functions as a stimulus-specific positive coregulator of p53 transcriptional responses. Length = 317

>gnl|CDD|173635 cd05054, PTKc_VEGFR, Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

 Score = 47.5 bits (113), Expect = 1e-05
 Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 1/78 (1%)

Query: 453 NQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IYEHGANPQTTHIVGTLGYLAPELTRTG 511
           +++ +HRD+   NILL      K+ DFGLA+ IY+     +       L ++APE     
Sbjct: 191 SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPESIFDK 250

Query: 512 KATTSTDVYSYGILMLEV 529
             TT +DV+S+G+L+ E+
Sbjct: 251 VYTTQSDVWSFGVLLWEI 268

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. There are five VEGF ligands in mammals, which bind, in an overlapping pattern to the three VEGFRs, which can form homo or heterodimers. VEGFRs regulate the cardiovascular system. They are critical for vascular development during embryogenesis and blood vessel formation in adults. They induce cellular functions common to other growth factor receptors such as cell migration, survival, and proliferation. VEGFR1 binds VEGFA, VEGFB, and placenta growth factor (PLGF). It regulates monocyte and macrophage migration, vascular permeability, haematopoiesis, and the recruitment of haematopietic progenitor cells from the bone marrow. Length = 337

>gnl|CDD|143372 cd07867, STKc_CDC2L6, Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

 Score = 47.4 bits (112), Expect = 1e-05
 Identities = 56/210 (26%), Positives = 91/210 (43%), Gaps = 27/210 (12%)

Query: 338 VGSGGFGRVYRGLMPSLG--LEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHG- 394
           VG G +G VY+          E A+K+I   +   M     EI  +  L+H N++ L   
Sbjct: 9   VGRGTYGHVYKAKRKDGKDEKEYALKQI-EGTGISMSA-CREIALLRELKHPNVIALQKV 66

Query: 395 -WCRKQDELLLVYDYVPNGSLDKLLFDKDHK-------LRKLLTWDQRYKILIGIAQSLL 446
                  ++ L++DY  +     + F +  K       L + +     Y+IL GI     
Sbjct: 67  FLSHSDRKVWLLFDYAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIH---- 122

Query: 447 YLHEECNQRVVHRDVKPSNILL----DTYLNAKLGDFGLAKIYEHGANP--QTTHIVGTL 500
           YLH      V+HRD+KP+NIL+          K+ D G A+++     P      +V T 
Sbjct: 123 YLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTF 179

Query: 501 GYLAPELTRTGKA-TTSTDVYSYGILMLEV 529
            Y APEL    +  T + D+++ G +  E+
Sbjct: 180 WYRAPELLLGARHYTKAIDIWAIGCIFAEL 209

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as the caspase-processed CDK11(p46). CDK11(p110), CDK11(p58), and CDK11(p46)do not belong to this subfamily. CDC2L6 is an associated protein of Mediator, a multiprotein complex that provides a platform to connect transcriptional and chromatin regulators and cofactors, in order to activate and mediate RNA polymerase II transcription. CDC2L6 is localized mainly in the nucleus amd exerts an opposing effect to CDK8 in VP16-dependent transcriptional activation by being a negative regulator. Length = 317

>gnl|CDD|133234 cd05103, PTKc_VEGFR2, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

 Score = 46.6 bits (110), Expect = 3e-05
 Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 1/78 (1%)

Query: 453 NQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IYEHGANPQTTHIVGTLGYLAPELTRTG 511
           +++ +HRD+   NILL      K+ DFGLA+ IY+     +       L ++APE     
Sbjct: 197 SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDR 256

Query: 512 KATTSTDVYSYGILMLEV 529
             T  +DV+S+G+L+ E+
Sbjct: 257 VYTIQSDVWSFGVLLWEI 274

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosphorylation and activation. VEGFR2 binds the ligands VEGFA, VEGFC, VEGFD and VEGFE. VEGFR2 signaling is implicated in all aspects of normal and pathological vascular endothelial cell biology. It induces a variety of cellular effects including migration, survival, and proliferation. It is critical in regulating embryonic vascular development and angiogenesis. VEGFR2 is the major signal transducer in pathological angiogenesis including cancer and diabetic retinopathy, and is a target for inhibition in cancer therapy. Length = 343

>gnl|CDD|133233 cd05102, PTKc_VEGFR3, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

 Score = 46.1 bits (109), Expect = 3e-05
 Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 1/78 (1%)

Query: 453 NQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IYEHGANPQTTHIVGTLGYLAPELTRTG 511
           +++ +HRD+   NILL      K+ DFGLA+ IY+     +       L ++APE     
Sbjct: 192 SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPESIFDK 251

Query: 512 KATTSTDVYSYGILMLEV 529
             TT +DV+S+G+L+ E+
Sbjct: 252 VYTTQSDVWSFGVLLWEI 269

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. VEGFR3 preferentially binds the ligands VEGFC and VEGFD. VEGFR3 is essential for lymphatic endothelial cell (EC) development and function. It has been shown to regulate adaptive immunity during corneal transplantation. VEGFR3 is upregulated on blood vascular ECs in pathological conditions such as vascular tumors and the periphery of solid tumors. It plays a role in cancer progression and lymph node metastasis. Missense mutations in the VEGFR3 gene are associated with primary human lymphedema. Length = 338

>gnl|CDD|173756 cd08216, PK_STRAD, Pseudokinase domain of STE20-related kinase adapter protein

 Score = 45.4 bits (108), Expect = 4e-05
 Identities = 49/193 (25%), Positives = 82/193 (42%), Gaps = 32/193 (16%)

Query: 358 VAIKRIGHNSQ--QGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSLD 415
           VA+K+I  +S   + +K    EI++  +L+H N++          EL +V   +  GS +
Sbjct: 28  VAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCE 87

Query: 416 KLLFDKDH---KLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYL 472
            LL  K H    L +L      + IL  +  +L Y+H   ++  +HR VK S+ILL    
Sbjct: 88  DLL--KTHFPEGLPELAI---AF-ILKDVLNALDYIH---SKGFIHRSVKASHILLSGDG 138

Query: 473 NAKL-----------GDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKA--TTSTDV 519
              L                  +++          V  L +L+PE+ +         +D+
Sbjct: 139 KVVLSGLRYSVSMIKHGKRQRVVHDF-----PKSSVKNLPWLSPEVLQQNLQGYNEKSDI 193

Query: 520 YSYGILMLEVACG 532
           YS GI   E+A G
Sbjct: 194 YSVGITACELANG 206

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. The structure of STRAD-alpha is available and shows that this protein binds ATP, has an ordered activation loop, and adopts a closed conformation typical of fully active protein kinases. It does not possess activity due to nonconservative substitutions of essential catalytic residues. ATP binding enhances the affinity of STRAD for MO25. The conformation of STRAD-alpha stabilized through ATP and MO25 may be needed to activate LKB1. Length = 314

>gnl|CDD|173653 cd05105, PTKc_PDGFR_alpha, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

 Score = 45.8 bits (108), Expect = 5e-05
 Identities = 37/127 (29%), Positives = 60/127 (47%), Gaps = 11/127 (8%)

Query: 406 YDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSN 465
           Y    +  +  LL D      + LT          +A+ + +L    ++  VHRD+   N
Sbjct: 214 YKGSNDSEVKNLLSDD---GSEGLTTLDLLSFTYQVARGMEFL---ASKNCVHRDLAARN 267

Query: 466 ILLDTYLNAKLGDFGLAKIYEHGAN---PQTTHIVGTLGYLAPELTRTGKATTSTDVYSY 522
           +LL      K+ DFGLA+   H +N     +T +   + ++APE       TT +DV+SY
Sbjct: 268 VLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFL--PVKWMAPESIFDNLYTTLSDVWSY 325

Query: 523 GILMLEV 529
           GIL+ E+
Sbjct: 326 GILLWEI 332

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-AB, and PDGF-CC induce PDGFR alpha homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR alpha signaling is important in the formation of lung alveoli, intestinal villi, mesenchymal dermis, and hair follicles, as well as in the development of oligodendrocytes, retinal astrocytes, neural crest cells, and testicular cells. Aberrant PDGFR alpha expression is associated with some human cancers. Mutations in PDGFR alpha have been found within a subset of gastrointestinal stromal tumors (GISTs). An active fusion protein FIP1L1-PDGFR alpha, derived from interstitial deletion, is associated with idiopathic hypereosinophilic syndrome (HES) and chronic eosinophilic leukemia (CEL). Length = 400

>gnl|CDD|133238 cd05107, PTKc_PDGFR_beta, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

 Score = 44.2 bits (104), Expect = 1e-04
 Identities = 30/105 (28%), Positives = 52/105 (49%), Gaps = 8/105 (7%)

Query: 428 LLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEH 487
            L++         +A  + +L    ++  VHRD+   N+L+      K+ DFGLA+    
Sbjct: 235 ALSYMDLVGFSYQVANGMEFL---ASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMR 291

Query: 488 GAN---PQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEV 529
            +N     +T +   L ++APE       TT +DV+S+GIL+ E+
Sbjct: 292 DSNYISKGSTFL--PLKWMAPESIFNNLYTTLSDVWSFGILLWEI 334

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-DD induce PDGFR beta homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR beta signaling leads to a variety of cellular effects including the stimulation of cell growth and chemotaxis, as well as the inhibition of apoptosis and GAP junctional communication. It is critical in normal angiogenesis as it is involved in the recruitment of pericytes and smooth muscle cells essential for vessel stability. Aberrant PDGFR beta expression is associated with some human cancers. The continuously-active fusion proteins of PDGFR beta with COL1A1 and TEL are associated with dermatofibrosarcoma protuberans (DFSP) and a subset of chronic myelomonocytic leukemia (CMML), respectively. Length = 401

>gnl|CDD|133235 cd05104, PTKc_Kit, Catalytic domain of the Protein Tyrosine Kinase, Kit

 Score = 42.2 bits (99), Expect = 6e-04
 Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 9/78 (11%)

Query: 457 VHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVG-----TLGYLAPELTRTG 511
           +HRD+   NILL      K+ DFGLA+   + +N    ++V       + ++APE     
Sbjct: 236 IHRDLAARNILLTHGRITKICDFGLARDIRNDSN----YVVKGNARLPVKWMAPESIFNC 291

Query: 512 KATTSTDVYSYGILMLEV 529
             T  +DV+SYGIL+ E+
Sbjct: 292 VYTFESDVWSYGILLWEI 309

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. Kit signaling is involved in major cellular functions including cell survival, proliferation, differentiation, adhesion, and chemotaxis. Mutations in Kit, which result in constitutive ligand-independent activation, are found in human cancers such as gastrointestinal stromal tumor (GIST) and testicular germ cell tumor (TGCT). The aberrant expression of Kit and/or SCF is associated with other tumor types such as systemic mastocytosis and cancers of the breast, neurons, lung, prostate, colon, and rectum. Although the structure of the human Kit catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 375

>gnl|CDD|173667 cd05576, STKc_RPK118_like, Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

 Score = 40.6 bits (95), Expect = 0.001
 Identities = 42/170 (24%), Positives = 75/170 (44%), Gaps = 16/170 (9%)

Query: 388 NLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLY 447
           N+V LH +   +D + LV  +   G L   +    +   + +   +R+   + +A  L  
Sbjct: 46  NMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISKFLNIPEECV---KRWAAEMVVA--LDA 100

Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
           LH E    +V RD+ P+NILLD   + +L  F      E   + +    +    Y APE+
Sbjct: 101 LHRE---GIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSCDGEAVENM----YCAPEV 153

Query: 508 TRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAA----AELLLVDWVKE 553
               + T + D +S G ++ E+  G+  +E   +       L + +WV E
Sbjct: 154 GGISEETEACDWWSLGAILFELLTGKTLVECHPSGINTHTTLNIPEWVSE 203

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phosphate (SPP), a lipid messenger involved in many cellular events. RPK118 may be involved in transmitting SPP-mediated signaling. RPK118 also binds the antioxidant peroxiredoxin-3 (PRDX3). RPK118 may be involved in the transport of PRDX3 from the cytoplasm to its site of function in the mitochondria. Length = 237

>gnl|CDD|165211 PHA02882, PHA02882, putative serine/threonine kinase; Provisional

 Score = 40.7 bits (95), Expect = 0.002
 Identities = 51/220 (23%), Positives = 88/220 (40%), Gaps = 33/220 (15%)

Query: 335 QNLVGSGGFGRVYRGLMPS--LGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQL 392
             L+G GGFG VY     S       A+ +I +   + +   V E +    +   + + L
Sbjct: 17  DKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETI---VMETLVYNNIYDIDKIAL 73

Query: 393 HGWCR-KQDELLLVYDYVPNGS------------LDKLLFDKDHKLRKLLTWDQRY--KI 437
             W      + L +  Y   GS            L+KL+ +     +++   +++    I
Sbjct: 74  --WKNIHNIDHLGIPKYYGCGSFKRCRMYYRFILLEKLVENTKEIFKRIKCKNKKLIKNI 131

Query: 438 LIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLA-------KIYEHGAN 490
           +  +  +L Y+HE     + H D+KP NI++D      + D+G+A       K  E+   
Sbjct: 132 MKDMLTTLEYIHE---HGISHGDIKPENIMVDGNNRGYIIDYGIASHFIIHGKHIEYSKE 188

Query: 491 PQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVA 530
            +  H  GTL Y   +       T   D+ S G  ML+ A
Sbjct: 189 QKDLH-RGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWA 227

Length = 294

>gnl|CDD|173718 cd05629, STKc_NDR_like_fungal, Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 40.6 bits (95), Expect = 0.002
 Identities = 29/122 (23%), Positives = 43/122 (35%), Gaps = 46/122 (37%)

Query: 457 VHRDVKPSNILLDTYLNAKLGDFGLA------------------KIYEHGANPQTTHI-- 496
           +HRD+KP NIL+D   + KL DFGL+                  K  ++  + + +    
Sbjct: 123 IHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVD 182

Query: 497 --------------------------VGTLGYLAPELTRTGKATTSTDVYSYGILMLEVA 530
                                     VGT  Y+APE+          D +S G +M E  
Sbjct: 183 SINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIMFECL 242

Query: 531 CG 532
            G
Sbjct: 243 IG 244

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of Ace2p activity and cellular morphogenesis) network. CBK1 and Orb6 play similar roles in coordinating cell morphology with cell cycle progression. Ukc1 is involved in morphogenesis, pathogenicity, and pigment formation. Cot1 plays a role in polar tip extension. Length = 377

>gnl|CDD|173766 cd08226, PK_STRAD_beta, Pseudokinase domain of STE20-related kinase adapter protein beta

 Score = 39.6 bits (92), Expect = 0.004
 Identities = 35/107 (32%), Positives = 50/107 (46%), Gaps = 15/107 (14%)

Query: 437 ILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHI 496
           IL G  + L YLH+      +HR++K S+IL+       L   GL+ +Y    N Q   +
Sbjct: 106 ILFGALRGLNYLHQ---NGYIHRNIKASHILISGDGLVSLS--GLSHLYSLVRNGQKAKV 160

Query: 497 V--------GTLGYLAPELTRTGKA--TTSTDVYSYGILMLEVACGR 533
           V          L +L+PEL R         +D+YS GI   E+A GR
Sbjct: 161 VYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGR 207

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. STRAD-beta is also referred to as ALS2CR2 (Amyotrophic lateral sclerosis 2 chromosomal region candidate gene 2 protein), since the human gene encoding it is located within the juvenile ALS2 critical region on chromosome 2q33-q34. It is not linked to the development of ALS2. Length = 328

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	653
KOG1187	361	consensus Serine/threonine protein kinase [Signal	100.0
cd06899	236	lectin_legume_LecRK_Arcelin_ConA legume lectins, l	100.0
PF00139	236	Lectin_legB: Legume lectin domain; InterPro: IPR00	100.0
KOG0581	364	consensus Mitogen-activated protein kinase kinase	100.0
KOG0192	362	consensus Tyrosine kinase specific for activated (	100.0
KOG0575	592	consensus Polo-like serine/threonine protein kinas	100.0
KOG0595	429	consensus Serine/threonine-protein kinase involved	100.0
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	100.0
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	100.0
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	100.0
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	100.0
KOG0598	357	consensus Ribosomal protein S6 kinase and related	100.0
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	100.0
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	100.0
KOG0198	313	consensus MEKK and related serine/threonine protei	100.0
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	100.0
KOG0661	538	consensus MAPK related serine/threonine protein ki	100.0
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	100.0
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	100.0
KOG0583	370	consensus Serine/threonine protein kinase [Signal	100.0
cd01951	223	lectin_L-type legume lectins. The L-type (legume-t	100.0
KOG0578	550	consensus p21-activated serine/threonine protein k	100.0
KOG0582	516	consensus Ste20-like serine/threonine protein kina	100.0
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	100.0
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	100.0
PTZ00263	329	protein kinase A catalytic subunit; Provisional	100.0
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	100.0
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	100.0
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	100.0
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	100.0
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	100.0
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	100.0
PHA02988	283	hypothetical protein; Provisional	100.0
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	100.0
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	100.0
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	100.0
KOG0605	550	consensus NDR and related serine/threonine kinases	100.0
KOG4721	904	consensus Serine/threonine protein kinase, contain	100.0
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	100.0
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	100.0
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	100.0
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	100.0
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	100.0
KOG0201	467	consensus Serine/threonine protein kinase [Signal	100.0
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	100.0
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	100.0
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	100.0
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	100.0
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	100.0
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	100.0
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	100.0
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	100.0
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	100.0
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	100.0
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	100.0
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	100.0
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	100.0
PHA03212	391	serine/threonine kinase US3; Provisional	100.0
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	100.0
PTZ00267	478	NIMA-related protein kinase; Provisional	100.0
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	100.0
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	100.0
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	100.0
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	100.0
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	100.0
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	100.0
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	100.0
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	100.0
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	100.0
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	100.0
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	100.0
KOG3653	534	consensus Transforming growth factor beta/activin	100.0
KOG0611	668	consensus Predicted serine/threonine protein kinas	100.0
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	100.0
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	100.0
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	100.0
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	100.0
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	100.0
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	100.0
KOG0589	426	consensus Serine/threonine protein kinase [General	100.0
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	100.0
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	100.0
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	100.0
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	100.0
PTZ00283	496	serine/threonine protein kinase; Provisional	100.0
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	100.0
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	100.0
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	100.0
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	100.0
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	100.0
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	100.0
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	100.0
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	100.0
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	100.0
PLN00034	353	mitogen-activated protein kinase kinase; Provision	100.0
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	100.0
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	100.0
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	100.0
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	100.0
KOG1989	738	consensus ARK protein kinase family [Signal transd	100.0
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	100.0
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	100.0
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	100.0
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	100.0
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	100.0
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	100.0
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	100.0
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	100.0
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	100.0
KOG0694	694	consensus Serine/threonine protein kinase [Signal	100.0
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	100.0
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	100.0
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	100.0
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	100.0
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	100.0
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	100.0
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	100.0
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	100.0
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	100.0
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	100.0
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	100.0
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	100.0
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	100.0
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	100.0
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	100.0
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	100.0
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	100.0
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	100.0
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	100.0
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	100.0
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	100.0
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	100.0
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	100.0
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	100.0
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	100.0
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	100.0
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	100.0
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	100.0
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	100.0
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	100.0
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	100.0
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	100.0
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	100.0
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	100.0
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	100.0
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	100.0
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	100.0
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	100.0
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	100.0
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	100.0
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	100.0
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	100.0
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	100.0
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	100.0
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	100.0
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	100.0
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	100.0
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	100.0
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	100.0
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	100.0
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	100.0
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	100.0
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	100.0
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	100.0
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	100.0
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	100.0
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	100.0
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	100.0
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	100.0
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	100.0
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	100.0
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	100.0
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	100.0
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	100.0
PTZ00036	440	glycogen synthase kinase; Provisional	100.0
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	100.0
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	100.0
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	100.0
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	100.0
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	100.0
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	100.0
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	100.0
PTZ00284	467	protein kinase; Provisional	100.0
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	100.0
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	100.0
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	100.0
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	100.0
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	100.0
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	100.0
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	100.0
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	100.0
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	100.0
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	100.0
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	100.0
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	100.0
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	100.0
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	100.0
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	100.0
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	100.0
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	100.0
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	100.0
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	100.0
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	100.0
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	100.0
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	100.0
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	100.0
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	100.0
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	100.0
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	100.0
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	100.0
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	100.0
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	100.0
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	100.0
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	100.0
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	100.0
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	100.0
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	100.0
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	100.0
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	100.0
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	100.0
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	100.0
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	100.0
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	100.0
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	100.0
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	100.0
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	100.0
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	100.0
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	100.0
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	100.0
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	100.0
PTZ00266	1021	NIMA-related protein kinase; Provisional	100.0
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	100.0
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	100.0
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	100.0
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	100.0
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	100.0
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	100.0
KOG0610	459	consensus Putative serine/threonine protein kinase	100.0
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	100.0
PHA03211	461	serine/threonine kinase US3; Provisional	100.0
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	100.0
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	100.0
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	100.0
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	100.0
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	100.0
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	100.0
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	100.0
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	100.0
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	100.0
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	100.0
PHA03209	357	serine/threonine kinase US3; Provisional	100.0
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	100.0
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	100.0
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	100.0
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	100.0
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	100.0
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	100.0
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	100.0
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	100.0
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	100.0
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	100.0
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	100.0
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	100.0
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	100.0
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	100.0
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	100.0
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	100.0
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	100.0
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	100.0
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	100.0
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	100.0
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	100.0
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	100.0
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	100.0
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	100.0
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	100.0
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	100.0
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	100.0
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	100.0
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	100.0
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	100.0
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	100.0
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	100.0
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	100.0
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	100.0
KOG2052	513	consensus Activin A type IB receptor, serine/threo	100.0
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	100.0
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	100.0
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	100.0
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	100.0
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	100.0
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	100.0
PHA03207	392	serine/threonine kinase US3; Provisional	100.0
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	100.0
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	100.0
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	100.0
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	100.0
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	100.0
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	100.0
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	100.0
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	100.0
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	100.0
KOG0577	948	consensus Serine/threonine protein kinase [Signal	100.0
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	100.0
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	100.0
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	100.0
KOG0584	632	consensus Serine/threonine protein kinase [General	100.0
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	100.0
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	100.0
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	100.0
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	100.0
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	100.0
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	100.0
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	100.0
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	100.0
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	100.0
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	100.0
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	100.0
PLN00009	294	cyclin-dependent kinase A; Provisional	100.0
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	100.0
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	100.0
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	100.0
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	100.0
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	100.0
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	100.0
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	100.0
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	100.0
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	100.0
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	100.0
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	100.0
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	100.0
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	100.0
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	100.0
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	100.0
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	100.0
KOG4717	864	consensus Serine/threonine protein kinase [Signal	100.0
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	100.0
PHA03210	501	serine/threonine kinase US3; Provisional	100.0
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	100.0
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	100.0
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	100.0
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	100.0
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	100.0
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	100.0
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	100.0
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	100.0
PHA02882	294	putative serine/threonine kinase; Provisional	100.0
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	100.0
KOG0596	677	consensus Dual specificity; serine/threonine and t	100.0
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	100.0
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	100.0
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	100.0
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	100.0
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	100.0
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	100.0
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	100.0
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	100.0
PTZ00024	335	cyclin-dependent protein kinase; Provisional	100.0
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	100.0
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	100.0
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	100.0
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	100.0
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	100.0
KOG0690	516	consensus Serine/threonine protein kinase [Signal	100.0
KOG0586	596	consensus Serine/threonine protein kinase [General	100.0
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	100.0
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	100.0
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	100.0
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	100.0
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	100.0
KOG0607	463	consensus MAP kinase-interacting kinase and relate	100.0
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	100.0
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	100.0
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	100.0
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	100.0
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	100.0
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	100.0
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	100.0
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.98
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.98
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.97
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	99.97
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	99.97
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.97
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.97
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	99.97
KOG0696	683	consensus Serine/threonine protein kinase [Signal	99.97
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	99.97
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	99.97
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	99.97
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.97
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	99.96
KOG0695	593	consensus Serine/threonine protein kinase [Signal	99.96
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	99.96
KOG1027	903	consensus Serine/threonine protein kinase and endo	99.96
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.96
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	99.96
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.95
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	99.95
KOG1290	590	consensus Serine/threonine protein kinase [Signal	99.95
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	99.95
KOG1152	772	consensus Signal transduction serine/threonine kin	99.95
KOG0576	829	consensus Mitogen-activated protein kinase kinase	99.94
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	99.94
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	99.94
PLN00181	793	protein SPA1-RELATED; Provisional	99.93
KOG1167	418	consensus Serine/threonine protein kinase of the C	99.92
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.91
PRK09188	365	serine/threonine protein kinase; Provisional	99.9
cd07308	218	lectin_leg-like legume-like lectins: ERGIC-53, ERG	99.88
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	99.88
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.86
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.85
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.84
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	99.83
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	99.83
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.82
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.82
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	99.8
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	99.8
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	99.8
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.79
PRK12274	218	serine/threonine protein kinase; Provisional	99.77
PRK10345	210	hypothetical protein; Provisional	99.77
cd06901	248	lectin_VIP36_VIPL VIP36 and VIPL type 1 transmembr	99.76
smart00090	237	RIO RIO-like kinase.	99.72
cd06902	225	lectin_ERGIC-53_ERGL ERGIC-53 and ERGL type 1 tran	99.72
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	99.71
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.71
PRK14879	211	serine/threonine protein kinase; Provisional	99.69
PRK09605	535	bifunctional UGMP family protein/serine/threonine	99.69
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	99.68
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	99.68
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	99.67
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	99.66
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	99.6
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.58
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	99.56
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	99.55
cd06903	215	lectin_EMP46_EMP47 EMP46 and EMP47 type 1 transmem	99.5
PF03388	229	Lectin_leg-like: Legume-like lectin family; InterP	99.5
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.47
KOG1266	458	consensus Protein kinase [Signal transduction mech	99.46
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	99.38
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	99.36
KOG1243	690	consensus Protein kinase [General function predict	99.27
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	99.27
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	99.24
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	99.12
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	99.12
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	99.1
KOG3839	351	consensus Lectin VIP36, involved in the transport	99.1
KOG3741	655	consensus Poly(A) ribonuclease subunit [RNA proces	99.06
KOG3087	229	consensus Serine/threonine protein kinase [General	98.95
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	98.93
KOG0606	1205	consensus Microtubule-associated serine/threonine	98.8
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	98.8
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	98.79
cd06900	255	lectin_VcfQ VcfQ bacterial pilus biogenesis protei	98.79
KOG3838	497	consensus Mannose lectin ERGIC-53, involved in gly	98.76
PRK09902	216	hypothetical protein; Provisional	98.48
KOG2137	700	consensus Protein kinase [Signal transduction mech	98.47
COG0478	304	RIO-like serine/threonine protein kinase fused to	98.47
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	98.45
COG4248	637	Uncharacterized protein with protein kinase and he	98.41
COG0661	517	AarF Predicted unusual protein kinase [General fun	98.27
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	98.23
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	98.21
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	98.19
KOG0576	829	consensus Mitogen-activated protein kinase kinase	98.03
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	97.97
PF01636	239	APH: Phosphotransferase enzyme family This family	97.95
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	97.92
PLN02876	822	acyl-CoA dehydrogenase	97.91
KOG1235	538	consensus Predicted unusual protein kinase [Genera	97.91
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	97.88
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	97.77
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	97.72
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	97.71
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	97.6
PRK10593	297	hypothetical protein; Provisional	97.58
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	97.48
PRK09550	401	mtnK methylthioribose kinase; Reviewed	97.47
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	97.45
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	97.28
PRK05231	319	homoserine kinase; Provisional	97.25
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	97.19
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	97.11
cd05152	276	MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH	96.61
PLN02236	344	choline kinase	96.6
KOG1093	725	consensus Predicted protein kinase (contains TBC a	96.54
COG3173	321	Predicted aminoglycoside phosphotransferase [Gener	96.45
KOG1826	2724	consensus Ras GTPase activating protein RasGAP/neu	96.28
KOG2268	465	consensus Serine/threonine protein kinase [Signal	96.14
PLN02421	330	phosphotransferase, alcohol group as acceptor/kina	96.07
PF03881	288	Fructosamin_kin: Fructosamine kinase; InterPro: IP	95.95
TIGR02904	309	spore_ysxE spore coat protein YsxE. Members of thi	95.86
PF01633	211	Choline_kinase: Choline/ethanolamine kinase; Inter	95.85
TIGR01767	370	MTRK 5-methylthioribose kinase. This enzyme is inv	95.61
TIGR02906	313	spore_CotS spore coat protein, CotS family. Member	95.6

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.1e-56  Score=472.98  Aligned_cols=288  Identities=46%  Similarity=0.802  Sum_probs=254.8

Q ss_pred             CCcccCHHHHHHhhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeee
Q 048419          316 GARRFKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGW  395 (653)
Q Consensus       316 ~~~~f~~~el~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~  395 (653)
                      ..+.|+|.|++.||++|+..++||+|+||.||+|...+ +..||||++.....+..++|.+|++++.+++|||+|+|+||
T Consensus        61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~-~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGy  139 (361)
T KOG1187|consen   61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSD-GTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGY  139 (361)
T ss_pred             CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECC-CCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEE
Confidence            46789999999999999999999999999999999975 58999998866544315669999999999999999999999


Q ss_pred             ecccc-eeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcE
Q 048419          396 CRKQD-ELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNA  474 (653)
Q Consensus       396 ~~~~~-~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~  474 (653)
                      |.+.+ +.+||||||++|+|.++|+.....   .|+|.+|++|+.++|+||+|||+.+.++|+||||||+|||||+++++
T Consensus       140 C~e~~~~~~LVYEym~nGsL~d~L~~~~~~---~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~a  216 (361)
T KOG1187|consen  140 CLEGGEHRLLVYEYMPNGSLEDHLHGKKGE---PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNA  216 (361)
T ss_pred             EecCCceEEEEEEccCCCCHHHHhCCCCCC---CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCE
Confidence            99999 599999999999999999886531   78999999999999999999999998899999999999999999999


Q ss_pred             EEEeecCcccccC-CCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHh
Q 048419          475 KLGDFGLAKIYEH-GANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKE  553 (653)
Q Consensus       475 kl~DfGla~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~  553 (653)
                      ||+|||+|+.... ........ .||.+|+|||++..+..+.|+|||||||+|+||+||+++.+...+.....+++|++.
T Consensus       217 KlsDFGLa~~~~~~~~~~~~~~-~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~  295 (361)
T KOG1187|consen  217 KLSDFGLAKLGPEGDTSVSTTV-MGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKP  295 (361)
T ss_pred             EccCccCcccCCccccceeeec-CCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHH
Confidence            9999999976543 22111111 799999999999999999999999999999999999999886654455568999999


Q ss_pred             hhcccchhHhhhhcc--CcCCH-HHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcCCC
Q 048419          554 LHLEGEITQAIDQTL--DYYDL-AEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLGDS  608 (653)
Q Consensus       554 ~~~~~~~~~~~d~~l--~~~~~-~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  608 (653)
                      ....+++.+++|+.+  ..+.. .++.++..++.+|++.+|.+||+|.||+++|+...
T Consensus       296 ~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~  353 (361)
T KOG1187|consen  296 LLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGIL  353 (361)
T ss_pred             HHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhc
Confidence            999999999999998  35554 68899999999999999999999999999995543

>cd06899 lectin_legume_LecRK_Arcelin_ConA legume lectins, lectin-like receptor kinases, arcelin, concanavalinA, and alpha-amylase inhibitor

Probab=100.00  E-value=3.8e-55  Score=434.94  Aligned_cols=231  Identities=44%  Similarity=0.699  Sum_probs=209.8

Q ss_pred             eeEEeCCCCC--CCeEEecceEecCCCcEEecCCC--CCceEEEEcCCCeecccCCCCceeeeEEEEEEEEecCCCCCCC
Q 048419            9 TSFLYNGFLH--ANLSLEGAAYISTSGILTVTNKS--EGLIGHALYPNPLRFKTSNKSVAIDFRTNFVFSILPKYPDLGG   84 (653)
Q Consensus         9 ~~f~~~~f~~--~~l~~~g~a~~~~~g~l~Lt~~~--~~~~Gr~~y~~pi~~~~~~~~~~~sF~t~F~f~i~~~~~~~~g   84 (653)
                      ++|+|++|..  .+|+|+|+|.+.++|.|+||++.  ..++|||+|++||+||+..+++++||+|+|+|.|.+.+...+|
T Consensus         1 ~~f~f~~f~~~~~~l~l~G~A~~~~~~~i~LT~~~~~~~~~G~v~y~~pi~l~~~~~~~~~sFst~F~F~i~~~~~~~~g   80 (236)
T cd06899           1 LSFNFNGFSSDQSNLTLQGDATISSNGALQLTNDTSPASSVGRALYSKPVRLWDSTTGKVASFSTSFSFSITPPNPSLGG   80 (236)
T ss_pred             CceecCCCCCCCCCEEEecceEcCCCCeEEecCCCCCCcceEEEEeCCCEEeecCCCCCceeEEEEEEEEEEcCCCCCCC
Confidence            4899999975  79999999999778999999998  8999999999999999999999999999999999987667789


Q ss_pred             CceEEEEecCCCCCCCCCCccccCCCcccCCCCCCCCceEEEEeecccccccCCCCCCeeeEecCCCCcCCcccCccccC
Q 048419           85 QGLAFIIISTNRPENCLANQFLGLPNITMSSSTKFSTRMLAVEFDIIQNTELIDINDNHVGIDISSLISSASEPASYYSG  164 (653)
Q Consensus        85 dGlaF~l~~~~~~~~~~~g~~lG~~~~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~~~Hvgid~ns~~s~~~~~~~~~~~  164 (653)
                      |||||+|+|....+.+..|++||+++..+.  +...+++|||||||++|.+++||++||||||+|++.|..+..+..   
T Consensus        81 dGlAF~i~~~~~~~~~~~G~~lG~~~~~~~--~~~~~~~vAVEFDT~~n~~~~D~~~nHigIdvn~~~S~~~~~~~~---  155 (236)
T cd06899          81 DGLAFFLAPTDSLPPASSGGYLGLFNSSNN--GNSSNHIVAVEFDTFQNPEFGDPDDNHVGIDVNSLVSVKAGYWDD---  155 (236)
T ss_pred             CeEEEEEecCCCCCCCCCcceeeeecCCCC--CCcccceEEEEeecccCcccCCCCCCeEEEEcCCcccceeecccc---
Confidence            999999999876655788999999988755  456789999999999999888999999999999998887766542   


Q ss_pred             CCCccccccCCCCceEEEEEecCCceEEEEEEeeCCCCCCCCCceeeeecCCcccccceEEeEecccCcccceeeeccee
Q 048419          165 NNHRIPILLRSGDPIQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLITASHNVHGWS  244 (653)
Q Consensus       165 ~~~~~~~~l~~g~~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~~l~~~~dL~~~l~~~~~vGFsastg~~~~~~~i~sWs  244 (653)
                          ..+.|.+|+.++|||+|++.+++|+|+|...+..+|..|++++++||+.+|+++||||||||||...|.|+|++|+
T Consensus       156 ----~~~~l~~g~~~~v~I~Y~~~~~~L~V~l~~~~~~~~~~~~ls~~vdL~~~l~~~~~vGFSasTG~~~~~h~i~sWs  231 (236)
T cd06899         156 ----DGGKLKSGKPMQAWIDYDSSSKRLSVTLAYSGVAKPKKPLLSYPVDLSKVLPEEVYVGFSASTGLLTELHYILSWS  231 (236)
T ss_pred             ----ccccccCCCeEEEEEEEcCCCCEEEEEEEeCCCCCCcCCEEEEeccHHHhCCCceEEEEEeEcCCCcceEEEEEEE
Confidence                2345789999999999999999999999988877899999999999999999999999999999999999999999


Q ss_pred             eeec
Q 048419          245 ISIG  248 (653)
Q Consensus       245 f~~~  248 (653)
                      |++.
T Consensus       232 F~s~  235 (236)
T cd06899         232 FSSN  235 (236)
T ss_pred             EEcC
Confidence            9863

This alignment model includes the legume lectins (also known as agglutinins), the arcelin (also known as phytohemagglutinin-L) family of lectin-like defense proteins, the LecRK family of lectin-like receptor kinases, concanavalinA (ConA), and an alpha-amylase inhibitor. Arcelin is a major seed glycoprotein discovered in kidney beans (Phaseolus vulgaris) that has insecticidal properties and protects the seeds from predation by larvae of various bruchids. Arcelin is devoid of monosaccharide binding properties and lacks a key metal-binding loop that is present in other members of this family. Phytohaemagglutinin (PHA) is a lectin found in plants, especially beans, that affects cell metabolism by inducing mitosis and by altering the permeability of the cell membrane to various proteins. PHA agglutinates most mammalian red blood cell types by bindin

>PF00139 Lectin_legB: Legume lectin domain; InterPro: IPR001220 Legume lectins are one of the largest lectin families with more than 70 lectins reported

Probab=100.00  E-value=9.4e-54  Score=426.48  Aligned_cols=232  Identities=36%  Similarity=0.571  Sum_probs=205.1

Q ss_pred             ceeEEeCCC-CCCCeEEecceEecCCCcEEecCCCC-CceEEEEcCCCeecccCCCCceeeeEEEEEEEEecC--CCCCC
Q 048419            8 TTSFLYNGF-LHANLSLEGAAYISTSGILTVTNKSE-GLIGHALYPNPLRFKTSNKSVAIDFRTNFVFSILPK--YPDLG   83 (653)
Q Consensus         8 ~~~f~~~~f-~~~~l~~~g~a~~~~~g~l~Lt~~~~-~~~Gr~~y~~pi~~~~~~~~~~~sF~t~F~f~i~~~--~~~~~   83 (653)
                      +++|+|+.| +..+++|+|+|.+..+|+|+||+... +++|||+|++||+|||..+++++||+|+|+|.|...  ....+
T Consensus         1 ~~~F~~~~F~~~~~~~l~G~A~~~~~~~l~LT~~~~~~~~G~~~y~~pi~l~d~~~~~~~sF~t~F~f~i~~~~~~~~~~   80 (236)
T PF00139_consen    1 SVSFSFPSFSNSSNLTLNGDASISSNGSLQLTPDSTNNQAGRAWYNNPIQLWDSTTGNVASFSTSFSFSITNGPGSSNNG   80 (236)
T ss_dssp             EEEEEESSBTTGTTEEEEETEEEETTSEEESSTBETSSEEEEEEESSEEESBETTTTEBEEEEEEEEEEEEESSSSSSS-
T ss_pred             CceEEcCCCCCCCceEEEeeEEeccCCeEEcCCCCCCCcEEEEEECCcEEEeCCCCcceeeeeeEEEEEEeccCCCCccC
Confidence            479999999 56899999999996689999999987 999999999999999999999999999999999643  45668


Q ss_pred             CCceEEEEecCCCCCCCCCCccccCCCcccCCCCCCCCceEEEEeecccccccCCCCCCeeeEecCCCCcCCcccCcccc
Q 048419           84 GQGLAFIIISTNRPENCLANQFLGLPNITMSSSTKFSTRMLAVEFDIIQNTELIDINDNHVGIDISSLISSASEPASYYS  163 (653)
Q Consensus        84 gdGlaF~l~~~~~~~~~~~g~~lG~~~~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~~~Hvgid~ns~~s~~~~~~~~~~  163 (653)
                      ||||||||+|....+.+..|++||+.+....  +...++.|||||||++|++++||+++|||||+|++.|..+.+++++ 
T Consensus        81 ~dGlAFvi~~~~~~~~~~~g~~lG~~~~~~~--~~~~~~~vAVEFDT~~N~~~~d~~~nHIgI~~n~~~s~~~~~~~~~-  157 (236)
T PF00139_consen   81 GDGLAFVIQPDPNLPGGSSGGYLGLFNSSTD--GNGINNSVAVEFDTYKNPEYNDPDDNHIGIDVNSVVSNKTASAGYY-  157 (236)
T ss_dssp             BEEEEEEEEETTSSTTTSSGGGTTTSSSSST--TGGGGCEEEEEEETSTCGGGTTTSSSEEEEEESSSSESEEEE-----
T ss_pred             CCceEEEEecCcccccCCCCCccCccccccC--CCccCcEEEEEEeeeecccccccCCCEEEEECCCCccccccccccc-
Confidence            9999999999986677789999999987655  4457789999999999999999999999999999999988776544 


Q ss_pred             CCCCccccccCCCCceEEEEEecCCceEEEEEEeeCCCCCCCCCceeeeecCCcccccceEEeEecccCcccceeeecce
Q 048419          164 GNNHRIPILLRSGDPIQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLITASHNVHGW  243 (653)
Q Consensus       164 ~~~~~~~~~l~~g~~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~~l~~~~dL~~~l~~~~~vGFsastg~~~~~~~i~sW  243 (653)
                         .....++.+|+.++|||+||+.+++|+|++.... .+|..|++++.+||+.+|+++||||||||||...|.|.|++|
T Consensus       158 ---~~~~~~l~~g~~~~v~I~Yd~~~~~L~V~l~~~~-~~~~~~~l~~~vdL~~~l~~~v~vGFsasTG~~~~~h~I~sW  233 (236)
T PF00139_consen  158 ---SSPSFSLSDGKWHTVWIDYDASTKRLSVYLDDNS-SKPSSPVLSVNVDLSAVLPEQVYVGFSASTGGSYQTHDILSW  233 (236)
T ss_dssp             ---EEEEHHHGTTSEEEEEEEEETTTTEEEEEEEETT-TTSEEEEEEEE--HHHHSCSEEEEEEEEEESSSSEEEEEEEE
T ss_pred             ---ccccccccCCcEEEEEEEEcCCccEEEEEEeccc-CCCcceeEEEEEchHHhcCCCcEEEEEeecCCCcceEEEEEE
Confidence               2467789999999999999999999999999884 678889999999999999999999999999999999999999


Q ss_pred             eee
Q 048419          244 SIS  246 (653)
Q Consensus       244 sf~  246 (653)
                      +|+
T Consensus       234 ~F~  236 (236)
T PF00139_consen  234 SFS  236 (236)
T ss_dssp             EEE
T ss_pred             EeC
Confidence            995

Leguminous plant lectins resemble each other in their physicochemical properties although they differ in their carbohydrate specificities. They consist of two or four subunits with relative molecular mass of 30 kDa and each subunit has one carbohydrate-binding site. The interaction with sugars requires tightly bound calcium and manganese ions. The structural similarities of these lectins are reported by the primary structural analyses and X-ray crystallographic studies. X-ray studies have shown that the folding of the polypeptide chains in the region of the carbohydrate-binding sites is also similar, despite differences in the primary sequences. The carbohydrate-binding sites of these lectins consist of two conserved amino acids on beta pleated sheets. One of these loops contains transition metals, calcium and manganese, which keep the amino acid residues of the sugar-binding site at the required positions. Amino acid sequences of this loop play an important role in the carbohydrate-binding specificities of these lectins. These lectins bind either glucose/mannose or galactose. The exact function of legume lectins is not known but they may be involved in the attachment of nitrogen-fixing bacteria to legumes and in the protection against pathogens. Some legume lectins are proteolytically processed to produce two chains, beta (which corresponds to the N-terminal) and alpha (C-terminal) (IPR000985 from INTERPRO). The lectin concanavalin A (conA) from jack bean is exceptional in that the two chains are transposed and ligated (by formation of a new peptide bond). The N terminus of mature conA thus corresponds to that of the alpha chain and the C terminus to the beta chain.; GO: 0005488 binding; PDB: 1VLN_B 2GDF_C 2JE9_C 2JEC_C 1DGL_B 2P37_B 2CWM_A 2P34_D 2OW4_A 3IPV_B ....

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=100.00  E-value=5.3e-46  Score=370.86  Aligned_cols=258  Identities=25%  Similarity=0.382  Sum_probs=216.3

Q ss_pred             cccCHHHHHHhhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC-chhhHHHHHHHHHHHhhcCCCceeeeeeee
Q 048419          318 RRFKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN-SQQGMKEFVAEIMSMGRLRHRNLVQLHGWC  396 (653)
Q Consensus       318 ~~f~~~el~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~  396 (653)
                      ..++..||+.       .+.||+|..|+|||++++.+++.+|+|.+... .....+++.+|++++++.+||+||+++|.|
T Consensus        74 ~~i~~~dle~-------~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF  146 (364)
T KOG0581|consen   74 NGISLSDLER-------LGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAF  146 (364)
T ss_pred             cccCHHHhhh-------hhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEE
Confidence            3466667655       57899999999999999999999999999544 455678899999999999999999999999


Q ss_pred             cccc-eeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEE
Q 048419          397 RKQD-ELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAK  475 (653)
Q Consensus       397 ~~~~-~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~k  475 (653)
                      .... .+.|+||||.+|||+.++...     +.+++...-+|+.+|++||.|||+.  ++||||||||+|||+++.|++|
T Consensus       147 ~~~~~~isI~mEYMDgGSLd~~~k~~-----g~i~E~~L~~ia~~VL~GL~YLh~~--~~IIHRDIKPsNlLvNskGeVK  219 (364)
T KOG0581|consen  147 YSNGEEISICMEYMDGGSLDDILKRV-----GRIPEPVLGKIARAVLRGLSYLHEE--RKIIHRDIKPSNLLVNSKGEVK  219 (364)
T ss_pred             EeCCceEEeehhhcCCCCHHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHhhc--cCeeeccCCHHHeeeccCCCEE
Confidence            9998 599999999999999999764     3489999999999999999999963  8999999999999999999999


Q ss_pred             EEeecCcccccCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhh--hhHHHHHHHHHh
Q 048419          476 LGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKA--AAELLLVDWVKE  553 (653)
Q Consensus       476 l~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~--~~~~~l~~~~~~  553 (653)
                      |||||.++.+...   .....+||..|||||.+.+..|+.++||||||+.++|+.+|+.|+....+  .....+.     
T Consensus       220 icDFGVS~~lvnS---~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll-----  291 (364)
T KOG0581|consen  220 ICDFGVSGILVNS---IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELL-----  291 (364)
T ss_pred             eccccccHHhhhh---hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHH-----
Confidence            9999999977554   34557899999999999999999999999999999999999999986411  1111111     


Q ss_pred             hhcccchhHhhhhccCcCCH-HHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          554 LHLEGEITQAIDQTLDYYDL-AEAELVLNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       554 ~~~~~~~~~~~d~~l~~~~~-~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                             ..+++..-...+. ...+++..++..||+.||.+||++.|++++-
T Consensus       292 -------~~Iv~~ppP~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~Hp  336 (364)
T KOG0581|consen  292 -------CAIVDEPPPRLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQHP  336 (364)
T ss_pred             -------HHHhcCCCCCCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhcCH
Confidence                   1122211111222 3568899999999999999999999999865

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=100.00  E-value=1.6e-45  Score=385.35  Aligned_cols=249  Identities=33%  Similarity=0.520  Sum_probs=206.7

Q ss_pred             ceeeeeeCcEEEEEEEeCCCCcE-EEEEEeccCc--hhhHHHHHHHHHHHhhcCCCceeeeeeeecccc-eeEEEEeccC
Q 048419          335 QNLVGSGGFGRVYRGLMPSLGLE-VAIKRIGHNS--QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQD-ELLLVYDYVP  410 (653)
Q Consensus       335 ~~~LG~G~fg~Vy~~~~~~~~~~-vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~-~~~lV~E~~~  410 (653)
                      .+.||+|+||+||+|.+.  |+. ||||++....  ....+.|.+|+.+|.+++|||||+++|+|.+.. .++||||||+
T Consensus        46 ~~~iG~G~~g~V~~~~~~--g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~  123 (362)
T KOG0192|consen   46 EEVLGSGSFGTVYKGKWR--GTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMP  123 (362)
T ss_pred             hhhcccCCceeEEEEEeC--CceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCC
Confidence            445999999999999997  455 9999997543  222679999999999999999999999999988 7999999999


Q ss_pred             CCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCC-eEecCCCCCcEEEcCCC-cEEEEeecCcccccCC
Q 048419          411 NGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQR-VVHRDVKPSNILLDTYL-NAKLGDFGLAKIYEHG  488 (653)
Q Consensus       411 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~-ivH~Dlkp~NIll~~~~-~~kl~DfGla~~~~~~  488 (653)
                      +|+|.++|+...   +..+++..+++++.|||+||.|||+   ++ ||||||||+||||+.++ ++||+|||+++.....
T Consensus       124 ~GsL~~~l~~~~---~~~l~~~~~l~~aldiArGm~YLH~---~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~  197 (362)
T KOG0192|consen  124 GGSLSVLLHKKR---KRKLPLKVRLRIALDIARGMEYLHS---EGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVIS  197 (362)
T ss_pred             CCcHHHHHhhcc---cCCCCHHHHHHHHHHHHHHHHHHhc---CCCeeecccChhhEEEcCCCCEEEECCCccceeeccc
Confidence            999999998851   4569999999999999999999999   67 99999999999999997 9999999999876543


Q ss_pred             CCCcccccccCCcccCccccc--cCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhh
Q 048419          489 ANPQTTHIVGTLGYLAPELTR--TGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQ  566 (653)
Q Consensus       489 ~~~~~~~~~gt~~y~aPE~~~--~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  566 (653)
                      . ...+...||+.|||||++.  ...++.|+||||||++||||+||+.||...... +  ....+......         
T Consensus       198 ~-~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~-~--~~~~v~~~~~R---------  264 (362)
T KOG0192|consen  198 K-TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPV-Q--VASAVVVGGLR---------  264 (362)
T ss_pred             c-ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHH-H--HHHHHHhcCCC---------
Confidence            2 2333468999999999999  568999999999999999999999999876542 1  11111111111         


Q ss_pred             ccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          567 TLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       567 ~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                        ...+..+...+..|+.+||+.||..||++.+++..|+.
T Consensus       265 --p~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~  302 (362)
T KOG0192|consen  265 --PPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLES  302 (362)
T ss_pred             --CCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHH
Confidence              11122256778899999999999999999999999974

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=5.6e-45  Score=383.24  Aligned_cols=251  Identities=28%  Similarity=0.425  Sum_probs=214.6

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC---chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN---SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVY  406 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  406 (653)
                      ..|...++||+|||++||+++...+|+.||+|++.+.   .....+...+|+++.++|+|||||+++++|++.+..|||.
T Consensus        18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL   97 (592)
T KOG0575|consen   18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL   97 (592)
T ss_pred             ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence            5688899999999999999999889999999999763   3445678899999999999999999999999999999999


Q ss_pred             eccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccccc
Q 048419          407 DYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE  486 (653)
Q Consensus       407 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~  486 (653)
                      |+|++++|.+++..     ++.+++.+.+.+..||+.||.|||+   ++|+|||||..|+||++++++||+|||||..+.
T Consensus        98 ELC~~~sL~el~Kr-----rk~ltEpEary~l~QIv~GlkYLH~---~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le  169 (592)
T KOG0575|consen   98 ELCHRGSLMELLKR-----RKPLTEPEARYFLRQIVEGLKYLHS---LGIIHRDLKLGNLFLNENMNVKIGDFGLATQLE  169 (592)
T ss_pred             EecCCccHHHHHHh-----cCCCCcHHHHHHHHHHHHHHHHHHh---cCceecccchhheeecCcCcEEecccceeeeec
Confidence            99999999999974     4679999999999999999999999   999999999999999999999999999999887


Q ss_pred             CCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhh
Q 048419          487 HGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQ  566 (653)
Q Consensus       487 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  566 (653)
                      ..... ....+||+.|+|||++.....+..+||||+||+||.|++|++||+...-.+...   .+..       .+.   
T Consensus       170 ~~~Er-k~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~---~Ik~-------~~Y---  235 (592)
T KOG0575|consen  170 YDGER-KKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYN---KIKL-------NEY---  235 (592)
T ss_pred             Ccccc-cceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHH---HHHh-------cCc---
Confidence            54333 334699999999999998889999999999999999999999998654322111   1110       000   


Q ss_pred             ccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          567 TLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       567 ~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                         ..+........+|+.++|++||.+|||+.+|+.+--
T Consensus       236 ---~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h~F  271 (592)
T KOG0575|consen  236 ---SMPSHLSAEAKDLIRKLLRPNPSERPSLDEVLDHPF  271 (592)
T ss_pred             ---ccccccCHHHHHHHHHHhcCCcccCCCHHHHhcCHh
Confidence               111223466889999999999999999999997543

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=100.00  E-value=8.5e-45  Score=364.96  Aligned_cols=203  Identities=29%  Similarity=0.512  Sum_probs=185.3

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC--chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEe
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYD  407 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E  407 (653)
                      .+|...+.||+|.||+||+|+++.++..||||.+.+.  .+...+.+..|+.+|+.|+|||||++++++...+.+|||||
T Consensus        10 ~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVME   89 (429)
T KOG0595|consen   10 GDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVME   89 (429)
T ss_pred             ccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEEE
Confidence            5677788899999999999999999999999999776  66677788999999999999999999999999999999999


Q ss_pred             ccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCC------CcEEEEeecC
Q 048419          408 YVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTY------LNAKLGDFGL  481 (653)
Q Consensus       408 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~------~~~kl~DfGl  481 (653)
                      ||.||+|.+||+.+.     .+++.....++.|||.||++||+   ++||||||||.||||+..      -.+||+|||+
T Consensus        90 yC~gGDLs~yi~~~~-----~l~e~t~r~Fm~QLA~alq~L~~---~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGf  161 (429)
T KOG0595|consen   90 YCNGGDLSDYIRRRG-----RLPEATARHFMQQLASALQFLHE---NNIIHRDLKPQNILLSTTARNDTSPVLKIADFGF  161 (429)
T ss_pred             eCCCCCHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCCcceEEeccCCCCCCCceEEecccch
Confidence            999999999998764     48999999999999999999999   999999999999999664      5689999999


Q ss_pred             cccccCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhh
Q 048419          482 AKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAA  542 (653)
Q Consensus       482 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~  542 (653)
                      |+.+..+  ......+|++.|||||++...+|+.|+|+||+|++|||+++|+.||+.....
T Consensus       162 AR~L~~~--~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~  220 (429)
T KOG0595|consen  162 ARFLQPG--SMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPK  220 (429)
T ss_pred             hhhCCch--hHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHH
Confidence            9988743  2345579999999999999999999999999999999999999999976654

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=8.6e-45  Score=378.45  Aligned_cols=249  Identities=31%  Similarity=0.448  Sum_probs=210.7

Q ss_pred             ceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEeccCCCCc
Q 048419          335 QNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSL  414 (653)
Q Consensus       335 ~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL  414 (653)
                      .+.||+|-||.||.|.++. ...||+|.++... ...+.|.+|+++|++|+|+|||+++|+|..++.++||||||+.|+|
T Consensus       211 ~~~LG~G~FG~V~~g~~~~-~~~vavk~ik~~~-m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~GsL  288 (468)
T KOG0197|consen  211 IRELGSGQFGEVWLGKWNG-STKVAVKTIKEGS-MSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKGSL  288 (468)
T ss_pred             HHHhcCCccceEEEEEEcC-CCcccceEEeccc-cChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecccCcH
Confidence            6789999999999999975 4589999996653 3457889999999999999999999999999999999999999999


Q ss_pred             hhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCCCCccc
Q 048419          415 DKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTT  494 (653)
Q Consensus       415 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~  494 (653)
                      .++|....   +..+...+.+.++.|||+|++||++   +++|||||.++||||+++..+||+|||||+....+......
T Consensus       289 l~yLr~~~---~~~l~~~~Ll~~a~qIaeGM~YLes---~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~~~  362 (468)
T KOG0197|consen  289 LDYLRTRE---GGLLNLPQLLDFAAQIAEGMAYLES---KNYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTASE  362 (468)
T ss_pred             HHHhhhcC---CCccchHHHHHHHHHHHHHHHHHHh---CCccchhhhhhheeeccCceEEEcccccccccCCCceeecC
Confidence            99998743   4568899999999999999999999   99999999999999999999999999999966555544444


Q ss_pred             ccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhccCcCCH
Q 048419          495 HIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYYDL  573 (653)
Q Consensus       495 ~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~  573 (653)
                      ...-+..|.|||.+..++++.|||||||||+||||+| |+.|+......+...   .+.+-+           +| ..+.
T Consensus       363 ~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~---~le~Gy-----------Rl-p~P~  427 (468)
T KOG0197|consen  363 GGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLE---LLERGY-----------RL-PRPE  427 (468)
T ss_pred             CCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHH---HHhccC-----------cC-CCCC
Confidence            4455779999999999999999999999999999999 888888766543221   111111           11 1233


Q ss_pred             HHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          574 AEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       574 ~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                      .++..+.+|+..||+.+|++|||++.+...|+.
T Consensus       428 ~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~  460 (468)
T KOG0197|consen  428 GCPDEVYELMKSCWHEDPEDRPTFETLREVLED  460 (468)
T ss_pred             CCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHH
Confidence            467889999999999999999999999888864

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.2e-45  Score=352.96  Aligned_cols=260  Identities=26%  Similarity=0.385  Sum_probs=213.2

Q ss_pred             CcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC--chhhHHHHHHHHHHHhhcCCCceeeeeee-ecccce-eEEEE
Q 048419          331 GFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLRHRNLVQLHGW-CRKQDE-LLLVY  406 (653)
Q Consensus       331 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~-~~~~~~-~~lV~  406 (653)
                      +|.+.++||+|.||+|||+....+|..+|.|.+.-.  +.+..+.+..|+.+|++|+|||||+++++ +.+.++ ++|||
T Consensus        20 ~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlnivm   99 (375)
T KOG0591|consen   20 DYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIVM   99 (375)
T ss_pred             HHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHHH
Confidence            366788999999999999999999999999998643  45567789999999999999999999994 444444 89999


Q ss_pred             eccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCC-CeEecCCCCCcEEEcCCCcEEEEeecCcccc
Q 048419          407 DYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQ-RVVHRDVKPSNILLDTYLNAKLGDFGLAKIY  485 (653)
Q Consensus       407 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~-~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~  485 (653)
                      |||..|+|...+..... .++.++++.+|+++.|+++||..+|..+.+ -|+||||||.||+|+++|.+||+||||++.+
T Consensus       100 E~c~~GDLsqmIk~~K~-qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l  178 (375)
T KOG0591|consen  100 ELCDAGDLSQMIKHFKK-QKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFL  178 (375)
T ss_pred             HhhcccCHHHHHHHHHh-ccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHh
Confidence            99999999999876532 367899999999999999999999997654 4899999999999999999999999999988


Q ss_pred             cCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhh
Q 048419          486 EHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAID  565 (653)
Q Consensus       486 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d  565 (653)
                      .... ......+|||.||+||.+.+..|+.||||||+||++|||+..+.||.+..-   ..+...    ...++...+  
T Consensus       179 ~s~~-tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~---~~L~~K----I~qgd~~~~--  248 (375)
T KOG0591|consen  179 SSKT-TFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNL---LSLCKK----IEQGDYPPL--  248 (375)
T ss_pred             cchh-HHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccH---HHHHHH----HHcCCCCCC--
Confidence            6543 233457899999999999999999999999999999999999999987521   112111    112221111  


Q ss_pred             hccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          566 QTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       566 ~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                           .+...+..+..|+..|+..||+.||+.-.+++.+..
T Consensus       249 -----p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~~  284 (375)
T KOG0591|consen  249 -----PDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQS  284 (375)
T ss_pred             -----cHHHhhhHHHHHHHHHccCCcccCCCcchHHHHHHH
Confidence                 113456889999999999999999996666665544

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=3.2e-44  Score=360.07  Aligned_cols=259  Identities=25%  Similarity=0.357  Sum_probs=208.1

Q ss_pred             hhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc-------hhhHHHHHHHHHHHhhcCCCceeeeeeeecccc
Q 048419          328 VTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS-------QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQD  400 (653)
Q Consensus       328 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~  400 (653)
                      ..+.|...+.||+|+||.|-+|+.+.+|+.||||++.+..       ........+|+++|++|+|||||++++++...+
T Consensus       170 ~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~d  249 (475)
T KOG0615|consen  170 FNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPD  249 (475)
T ss_pred             hcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCC
Confidence            3456778899999999999999999999999999996531       112234579999999999999999999999999


Q ss_pred             eeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCC---CcEEEE
Q 048419          401 ELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTY---LNAKLG  477 (653)
Q Consensus       401 ~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~---~~~kl~  477 (653)
                      ..|+||||++||+|.+.+-.+.     .+.+..-..++.|++.|+.|||+   +||+||||||+|||+..+   ..+||+
T Consensus       250 s~YmVlE~v~GGeLfd~vv~nk-----~l~ed~~K~~f~Qll~avkYLH~---~GI~HRDiKPeNILl~~~~e~~llKIt  321 (475)
T KOG0615|consen  250 SSYMVLEYVEGGELFDKVVANK-----YLREDLGKLLFKQLLTAVKYLHS---QGIIHRDIKPENILLSNDAEDCLLKIT  321 (475)
T ss_pred             ceEEEEEEecCccHHHHHHhcc-----ccccchhHHHHHHHHHHHHHHHH---cCcccccCCcceEEeccCCcceEEEec
Confidence            9999999999999999987653     46777777899999999999999   999999999999999655   779999


Q ss_pred             eecCcccccCCCCCcccccccCCcccCccccccCCC---CCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhh
Q 048419          478 DFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKA---TTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKEL  554 (653)
Q Consensus       478 DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~---~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~  554 (653)
                      |||+|+....  ...+...+||+.|.|||++.+...   ..+.|+||+||+||-+++|.+||.......  .+.    +.
T Consensus       322 DFGlAK~~g~--~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~--sl~----eQ  393 (475)
T KOG0615|consen  322 DFGLAKVSGE--GSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDP--SLK----EQ  393 (475)
T ss_pred             ccchhhcccc--ceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCc--cHH----HH
Confidence            9999998763  345667899999999999976643   348899999999999999999998654321  011    11


Q ss_pred             hcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcCC
Q 048419          555 HLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLGD  607 (653)
Q Consensus       555 ~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  607 (653)
                      ...|+....     .....+..++..+|+.+||..||++|||+.|++++-+-.
T Consensus       394 I~~G~y~f~-----p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~  441 (475)
T KOG0615|consen  394 ILKGRYAFG-----PLQWDRISEEALDLINWMLVVDPENRPSADEALNHPWFK  441 (475)
T ss_pred             HhcCccccc-----ChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcChhhh
Confidence            111111100     011123467899999999999999999999999987643

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=100.00  E-value=6.5e-43  Score=337.50  Aligned_cols=263  Identities=23%  Similarity=0.299  Sum_probs=209.8

Q ss_pred             CcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC--chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEec
Q 048419          331 GFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDY  408 (653)
Q Consensus       331 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~  408 (653)
                      .|+...++|+|+||.|||++++++|+.||||++...  ++.-.+..++|+++|++|+|+|+|.++++|.....++||+||
T Consensus         3 kYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~   82 (396)
T KOG0593|consen    3 KYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEY   82 (396)
T ss_pred             HHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEeee
Confidence            466678899999999999999999999999999654  334456778999999999999999999999999999999999


Q ss_pred             cCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCC
Q 048419          409 VPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHG  488 (653)
Q Consensus       409 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~  488 (653)
                      |+. ++.+-|....    ..++.+...+++.|+++|+.|+|+   +++|||||||+|||++.++.+||||||+|+.+.. 
T Consensus        83 ~dh-TvL~eLe~~p----~G~~~~~vk~~l~Q~l~ai~~cHk---~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~-  153 (396)
T KOG0593|consen   83 CDH-TVLHELERYP----NGVPSELVKKYLYQLLKAIHFCHK---NNCIHRDIKPENILITQNGVVKLCDFGFARTLSA-  153 (396)
T ss_pred             cch-HHHHHHHhcc----CCCCHHHHHHHHHHHHHHhhhhhh---cCeecccCChhheEEecCCcEEeccchhhHhhcC-
Confidence            977 4444454443    237888899999999999999999   8999999999999999999999999999998764 


Q ss_pred             CCCcccccccCCcccCcccccc-CCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhh--
Q 048419          489 ANPQTTHIVGTLGYLAPELTRT-GKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAID--  565 (653)
Q Consensus       489 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d--  565 (653)
                      ....-+.++.|.+|+|||.+.+ .+|....|||++||++.||++|.+.|-+..+.+.+.+....-.... .+..+++.  
T Consensus       154 pgd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~-prhq~iF~~N  232 (396)
T KOG0593|consen  154 PGDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLI-PRHQSIFSSN  232 (396)
T ss_pred             CcchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccC-HHHHHHhccC
Confidence            3344566789999999999987 6899999999999999999999999887766665544332211110 11111111  


Q ss_pred             --------hccC------cCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 048419          566 --------QTLD------YYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEF  603 (653)
Q Consensus       566 --------~~l~------~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  603 (653)
                              |...      .........+++++..|++.||.+|++.+|++.+
T Consensus       233 ~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H  284 (396)
T KOG0593|consen  233 PFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHH  284 (396)
T ss_pred             CceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcC
Confidence                    1110      1111223578999999999999999999999864

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=100.00  E-value=3.2e-42  Score=343.79  Aligned_cols=250  Identities=26%  Similarity=0.341  Sum_probs=208.8

Q ss_pred             hcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC---chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEE
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN---SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLV  405 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV  405 (653)
                      .+.|+..++||+|+||+||.++.+++++.+|+|++++.   .....+...+|..+|.+++||.||++.-.|.+.+++|||
T Consensus        24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylV  103 (357)
T KOG0598|consen   24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLV  103 (357)
T ss_pred             hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEE
Confidence            35789999999999999999999999999999999764   344567788999999999999999999999999999999


Q ss_pred             EeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccc
Q 048419          406 YDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIY  485 (653)
Q Consensus       406 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~  485 (653)
                      +||+.||.|..+|.+..     .+++....-.+..|+.||.|||+   ++||||||||+|||||++|+++|+||||++..
T Consensus       104 ld~~~GGeLf~hL~~eg-----~F~E~~arfYlaEi~lAL~~LH~---~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~  175 (357)
T KOG0598|consen  104 LDYLNGGELFYHLQREG-----RFSEDRARFYLAEIVLALGYLHS---KGIIYRDLKPENILLDEQGHIKLTDFGLCKED  175 (357)
T ss_pred             EeccCCccHHHHHHhcC-----CcchhHHHHHHHHHHHHHHHHHh---CCeeeccCCHHHeeecCCCcEEEeccccchhc
Confidence            99999999999998754     48888888899999999999999   99999999999999999999999999999964


Q ss_pred             cCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhh
Q 048419          486 EHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAID  565 (653)
Q Consensus       486 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d  565 (653)
                      ... ...+...+||+.|||||++....++..+|.||+|+++|||++|.+||...+...      +...         +..
T Consensus       176 ~~~-~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~------~~~~---------I~~  239 (357)
T KOG0598|consen  176 LKD-GDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKK------MYDK---------ILK  239 (357)
T ss_pred             ccC-CCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHH------HHHH---------Hhc
Confidence            332 234455799999999999999999999999999999999999999998765321      1111         111


Q ss_pred             hccCcCCHHHHHHHHHHHHHcCCCCCCCCC----CHHHHHH
Q 048419          566 QTLDYYDLAEAELVLNLGLFCSAPNPVYRP----DMRRVVE  602 (653)
Q Consensus       566 ~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RP----s~~evl~  602 (653)
                      ..+...+.-......+++.+.++.||++|-    .+.+|-+
T Consensus       240 ~k~~~~p~~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~  280 (357)
T KOG0598|consen  240 GKLPLPPGYLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKR  280 (357)
T ss_pred             CcCCCCCccCCHHHHHHHHHHhccCHHHhcCCCCChHHhhc
Confidence            111111222346678999999999999995    5555544

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=100.00  E-value=4.4e-43  Score=374.58  Aligned_cols=265  Identities=30%  Similarity=0.488  Sum_probs=222.8

Q ss_pred             ccCHHHHHHhhcCc---------CcceeeeeeCcEEEEEEEeCCCC---cEEEEEEeccC-chhhHHHHHHHHHHHhhcC
Q 048419          319 RFKYAELASVTKGF---------GEQNLVGSGGFGRVYRGLMPSLG---LEVAIKRIGHN-SQQGMKEFVAEIMSMGRLR  385 (653)
Q Consensus       319 ~f~~~el~~at~~f---------~~~~~LG~G~fg~Vy~~~~~~~~---~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~  385 (653)
                      .++|+|-..|-..|         .+.++||.|.||.||+|.++..|   ..||||.++.. ......+|+.|+.+|.+..
T Consensus       609 P~TYEDPnqAvreFakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFd  688 (996)
T KOG0196|consen  609 PHTYEDPNQAVREFAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFD  688 (996)
T ss_pred             CccccCccHHHHHhhhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCC
Confidence            36676665555443         45689999999999999987554   57999999865 4556789999999999999


Q ss_pred             CCceeeeeeeecccceeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCc
Q 048419          386 HRNLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSN  465 (653)
Q Consensus       386 H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~N  465 (653)
                      ||||++|.|+..+.+..+||.|||++|+|+.+|..+.+    .+++.|+..++++||.|+.||.+   .++|||||.++|
T Consensus       689 HPNIIrLEGVVTks~PvMIiTEyMENGsLDsFLR~~DG----qftviQLVgMLrGIAsGMkYLsd---m~YVHRDLAARN  761 (996)
T KOG0196|consen  689 HPNIIRLEGVVTKSKPVMIITEYMENGSLDSFLRQNDG----QFTVIQLVGMLRGIASGMKYLSD---MNYVHRDLAARN  761 (996)
T ss_pred             CCcEEEEEEEEecCceeEEEhhhhhCCcHHHHHhhcCC----ceEeehHHHHHHHHHHHhHHHhh---cCchhhhhhhhh
Confidence            99999999999999999999999999999999998863    38999999999999999999999   899999999999


Q ss_pred             EEEcCCCcEEEEeecCcccccCCCCCccccccc--CCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhh
Q 048419          466 ILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVG--TLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAA  542 (653)
Q Consensus       466 Ill~~~~~~kl~DfGla~~~~~~~~~~~~~~~g--t~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~  542 (653)
                      ||++++..+|++||||++.++.+.....+..-|  ..+|.|||.+...++|.+|||||||++|||.++ |.+||-.+.+.
T Consensus       762 ILVNsnLvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQ  841 (996)
T KOG0196|consen  762 ILVNSNLVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ  841 (996)
T ss_pred             eeeccceEEEeccccceeecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchH
Confidence            999999999999999999886655333333333  469999999999999999999999999999777 99999876653


Q ss_pred             hHHHHHHHHHhhhcccchhHhhhhcc-CcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          543 AELLLVDWVKELHLEGEITQAIDQTL-DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       543 ~~~~l~~~~~~~~~~~~~~~~~d~~l-~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                      +.                ...+++.. ...+++++..|.+|++.||+.|-.+||.+.||+..|..
T Consensus       842 dV----------------IkaIe~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDk  890 (996)
T KOG0196|consen  842 DV----------------IKAIEQGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDK  890 (996)
T ss_pred             HH----------------HHHHHhccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHH
Confidence            32                12222222 22345678889999999999999999999999998865

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=100.00  E-value=1.6e-42  Score=378.01  Aligned_cols=257  Identities=26%  Similarity=0.400  Sum_probs=215.7

Q ss_pred             CcceeeeeeCcEEEEEEEeCC-----CCcEEEEEEeccCchh-hHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEE
Q 048419          333 GEQNLVGSGGFGRVYRGLMPS-----LGLEVAIKRIGHNSQQ-GMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVY  406 (653)
Q Consensus       333 ~~~~~LG~G~fg~Vy~~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  406 (653)
                      ...+.||+|.||+||+|...+     ..+.||||.++..... ..++|.+|++++..|+|||||+|+|.|.+++.+++|+
T Consensus       489 ~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~MvF  568 (774)
T KOG1026|consen  489 VFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLCMVF  568 (774)
T ss_pred             eehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeEEEE
Confidence            446779999999999998643     3467999999876544 7889999999999999999999999999999999999


Q ss_pred             eccCCCCchhhhhcccccccc---------cchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEE
Q 048419          407 DYVPNGSLDKLLFDKDHKLRK---------LLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLG  477 (653)
Q Consensus       407 E~~~~gsL~~~l~~~~~~~~~---------~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~  477 (653)
                      |||..|+|.++|..+.+....         +|+..+.+.|+.|||.|++||-+   +.+|||||..+|+|+.++..+||+
T Consensus       569 EYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~---~~FVHRDLATRNCLVge~l~VKIs  645 (774)
T KOG1026|consen  569 EYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSS---HHFVHRDLATRNCLVGENLVVKIS  645 (774)
T ss_pred             EecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CcccccchhhhhceeccceEEEec
Confidence            999999999999876554332         38899999999999999999999   999999999999999999999999


Q ss_pred             eecCcccccCCCCCccc-ccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhh
Q 048419          478 DFGLAKIYEHGANPQTT-HIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELH  555 (653)
Q Consensus       478 DfGla~~~~~~~~~~~~-~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~  555 (653)
                      ||||++..-...+.... ...-.++||+||.+..+++|.+||||||||+|||+.+ |+-|+.+..+.+..   +    ..
T Consensus       646 DfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVI---e----~i  718 (774)
T KOG1026|consen  646 DFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVI---E----CI  718 (774)
T ss_pred             ccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHHH---H----HH
Confidence            99999965443333222 3344679999999999999999999999999999999 99999877654321   1    11


Q ss_pred             cccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcCC
Q 048419          556 LEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLGD  607 (653)
Q Consensus       556 ~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  607 (653)
                      ..+.+        -..+..++.++..|+..||+.+|.+||+++||-..|..-
T Consensus       719 ~~g~l--------L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~  762 (774)
T KOG1026|consen  719 RAGQL--------LSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAW  762 (774)
T ss_pred             HcCCc--------ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHH
Confidence            22222        234456788999999999999999999999999999753

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.4e-41  Score=345.39  Aligned_cols=261  Identities=27%  Similarity=0.393  Sum_probs=209.0

Q ss_pred             CcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccc--eeEEEEec
Q 048419          331 GFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQD--ELLLVYDY  408 (653)
Q Consensus       331 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~--~~~lV~E~  408 (653)
                      ++...+.||+|.||.||++....+|...|||.+...+....+.+.+|+.+|++++|||||+++|.....+  .+++.|||
T Consensus        18 ~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mEy   97 (313)
T KOG0198|consen   18 NWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFMEY   97 (313)
T ss_pred             hhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeeec
Confidence            3455789999999999999999889999999987654334677899999999999999999999755544  68999999


Q ss_pred             cCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcC-CCcEEEEeecCcccccC
Q 048419          409 VPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDT-YLNAKLGDFGLAKIYEH  487 (653)
Q Consensus       409 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~-~~~~kl~DfGla~~~~~  487 (653)
                      +++|+|.+++....   . .|++..+.+..+||++||.|||+   ++|+||||||+||||+. ++.+||+|||+++....
T Consensus        98 ~~~GsL~~~~~~~g---~-~l~E~~v~~ytr~iL~GL~ylHs---~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~  170 (313)
T KOG0198|consen   98 APGGSLSDLIKRYG---G-KLPEPLVRRYTRQILEGLAYLHS---KGIVHCDIKPANILLDPSNGDVKLADFGLAKKLES  170 (313)
T ss_pred             cCCCcHHHHHHHcC---C-CCCHHHHHHHHHHHHHHHHHHHh---CCEeccCcccceEEEeCCCCeEEeccCcccccccc
Confidence            99999999998765   2 59999999999999999999999   99999999999999999 79999999999987663


Q ss_pred             --CCCCcccccccCCcccCccccccC-CCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhh
Q 048419          488 --GANPQTTHIVGTLGYLAPELTRTG-KATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAI  564 (653)
Q Consensus       488 --~~~~~~~~~~gt~~y~aPE~~~~~-~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  564 (653)
                        ..........||+.|||||++..+ ....++||||+||++.||+||++||.....     ..+++.........+   
T Consensus       171 ~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~-----~~~~~~~ig~~~~~P---  242 (313)
T KOG0198|consen  171 KGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFE-----EAEALLLIGREDSLP---  242 (313)
T ss_pred             ccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcc-----hHHHHHHHhccCCCC---
Confidence              222334457899999999999854 334599999999999999999999986311     111111111111111   


Q ss_pred             hhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcCCCCCC
Q 048419          565 DQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLGDSSLP  611 (653)
Q Consensus       565 d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~p  611 (653)
                           ..+........+++.+|++.+|+.|||+.+++++..-....+
T Consensus       243 -----~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~~~  284 (313)
T KOG0198|consen  243 -----EIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQNSI  284 (313)
T ss_pred             -----CCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhcccc
Confidence                 112223567889999999999999999999999876544333

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.6e-41  Score=348.68  Aligned_cols=274  Identities=25%  Similarity=0.331  Sum_probs=215.5

Q ss_pred             cCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc--hhhHHHHHHHHHHHhhcCCCceeeeeeeeccc--ceeEEEEe
Q 048419          332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS--QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQ--DELLLVYD  407 (653)
Q Consensus       332 f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~--~~~~lV~E  407 (653)
                      |+..++||+|.||.||||++..+|+.||+|+++...  .....-..+||.+|++|+||||++|.+...+.  ..+|||+|
T Consensus       119 feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlVFe  198 (560)
T KOG0600|consen  119 FEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLVFE  198 (560)
T ss_pred             HHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEEEe
Confidence            444678999999999999999999999999997654  33345567899999999999999999998777  68999999


Q ss_pred             ccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccC
Q 048419          408 YVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEH  487 (653)
Q Consensus       408 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~  487 (653)
                      ||++ +|.-++....    -.+++.++..+++|++.||+|||.   ++|+|||||.+|||||.+|.+||+|||||+++..
T Consensus       199 YMdh-DL~GLl~~p~----vkft~~qIKc~mkQLl~Gl~~cH~---~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~  270 (560)
T KOG0600|consen  199 YMDH-DLSGLLSSPG----VKFTEPQIKCYMKQLLEGLEYCHS---RGVLHRDIKGSNILIDNNGVLKIADFGLARFYTP  270 (560)
T ss_pred             cccc-hhhhhhcCCC----cccChHHHHHHHHHHHHHHHHHhh---cCeeeccccccceEEcCCCCEEeccccceeeccC
Confidence            9976 8888886643    348999999999999999999999   9999999999999999999999999999998877


Q ss_pred             CCCCcccccccCCcccCccccccC-CCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHh-----hhcccchh
Q 048419          488 GANPQTTHIVGTLGYLAPELTRTG-KATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKE-----LHLEGEIT  561 (653)
Q Consensus       488 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~-----~~~~~~~~  561 (653)
                      ......+..+-|..|+|||++.+. .|+.+.|+||.||+|.||++|++.+.+..+.+++..+-.+-.     .|...++.
T Consensus       271 ~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP  350 (560)
T KOG0600|consen  271 SGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLP  350 (560)
T ss_pred             CCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCC
Confidence            766667777889999999998765 699999999999999999999999998777655432211100     01101111


Q ss_pred             --HhhhhccCcCC--H-----HHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC-CCCCCCCC
Q 048419          562 --QAIDQTLDYYD--L-----AEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG-DSSLPPLP  614 (653)
Q Consensus       562 --~~~d~~l~~~~--~-----~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~-~~~~p~~p  614 (653)
                        ..+.+. ..+.  .     ......++|+..+|..||.+|.|+.++++.=.. ..++|..|
T Consensus       351 ~~~~~kp~-~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF~t~p~~~~p  412 (560)
T KOG0600|consen  351 HATIFKPQ-QPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQSEYFTTEPLPCDP  412 (560)
T ss_pred             cccccCCC-CcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcCcccccCCCCCCc
Confidence              000000 0111  1     113567899999999999999999999975443 44444433

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=8.3e-42  Score=348.31  Aligned_cols=268  Identities=25%  Similarity=0.336  Sum_probs=215.7

Q ss_pred             hhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHH--HHHHHHHHhhcC-CCceeeeeeeecccc-eeE
Q 048419          328 VTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKE--FVAEIMSMGRLR-HRNLVQLHGWCRKQD-ELL  403 (653)
Q Consensus       328 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~--~~~E~~~l~~l~-H~niv~l~g~~~~~~-~~~  403 (653)
                      .-++|...+.||.|.||.||+|+...+|..||||+++..-.. .++  -++|+..|++|+ ||||++|.+.+.+.+ .++
T Consensus         8 ~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s-~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~   86 (538)
T KOG0661|consen    8 FMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYS-WEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILY   86 (538)
T ss_pred             HHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhcc-HHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEe
Confidence            346777788999999999999999999999999999765333 333  358999999998 999999999999988 899


Q ss_pred             EEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcc
Q 048419          404 LVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK  483 (653)
Q Consensus       404 lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~  483 (653)
                      +|||||+ .+|++++..+    ++.+++..+..|+.||++||+|+|+   +|+.||||||+|||+..+..+||+|||+||
T Consensus        87 fVfE~Md-~NLYqLmK~R----~r~fse~~irnim~QilqGL~hiHk---~GfFHRDlKPENiLi~~~~~iKiaDFGLAR  158 (538)
T KOG0661|consen   87 FVFEFMD-CNLYQLMKDR----NRLFSESDIRNIMYQILQGLAHIHK---HGFFHRDLKPENILISGNDVIKIADFGLAR  158 (538)
T ss_pred             eeHHhhh-hhHHHHHhhc----CCcCCHHHHHHHHHHHHHHHHHHHh---cCcccccCChhheEecccceeEeccccccc
Confidence            9999995 5999999877    4679999999999999999999999   999999999999999999999999999999


Q ss_pred             cccCCCCCcccccccCCcccCcccc-ccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhccc----
Q 048419          484 IYEHGANPQTTHIVGTLGYLAPELT-RTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEG----  558 (653)
Q Consensus       484 ~~~~~~~~~~~~~~gt~~y~aPE~~-~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~----  558 (653)
                      .+...  +.-+.++.|.+|+|||++ ..+.|+.+.|||++||+++|+.+.++.|-+..+.++..-+-.+.......    
T Consensus       159 ev~Sk--pPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~e  236 (538)
T KOG0661|consen  159 EVRSK--PPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPE  236 (538)
T ss_pred             ccccC--CCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchh
Confidence            76543  345667899999999986 46679999999999999999999999988766655433222221111111    


Q ss_pred             --chhHhhhhcc---CcCC-----HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          559 --EITQAIDQTL---DYYD-----LAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       559 --~~~~~~d~~l---~~~~-----~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                        .+...+.-++   ...+     .....++.+++..|++.||.+|||+.|++++--.
T Consensus       237 g~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~pff  294 (538)
T KOG0661|consen  237 GYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQHPFF  294 (538)
T ss_pred             HHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcCccc
Confidence              1222222222   1111     1245789999999999999999999999997643

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=100.00  E-value=1.3e-40  Score=316.83  Aligned_cols=284  Identities=24%  Similarity=0.345  Sum_probs=221.3

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchh-h-HHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEe
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQ-G-MKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYD  407 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~-~-~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E  407 (653)
                      ++|...+.||+|.||.||+|++..+|+.||||+++..... + .....+|++.|+.++|+||+.+++.+...+.+.||+|
T Consensus         2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE   81 (318)
T KOG0659|consen    2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE   81 (318)
T ss_pred             chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence            4566788999999999999999999999999999765322 2 3467899999999999999999999999999999999


Q ss_pred             ccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccC
Q 048419          408 YVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEH  487 (653)
Q Consensus       408 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~  487 (653)
                      ||+. +|+..+....    ..|+..++..++.++++||+|||+   +.|+||||||.|+|++++|.+||+|||+|+.+..
T Consensus        82 fm~t-dLe~vIkd~~----i~l~pa~iK~y~~m~LkGl~y~H~---~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~  153 (318)
T KOG0659|consen   82 FMPT-DLEVVIKDKN----IILSPADIKSYMLMTLKGLAYCHS---KWILHRDLKPNNLLISSDGQLKIADFGLARFFGS  153 (318)
T ss_pred             eccc-cHHHHhcccc----cccCHHHHHHHHHHHHHHHHHHHh---hhhhcccCCccceEEcCCCcEEeecccchhccCC
Confidence            9965 9999997763    568888999999999999999999   8999999999999999999999999999998865


Q ss_pred             CCCCcccccccCCcccCccccccC-CCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccc------h
Q 048419          488 GANPQTTHIVGTLGYLAPELTRTG-KATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGE------I  560 (653)
Q Consensus       488 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~------~  560 (653)
                      ..... +..+-|..|+|||.+.+. .|+...||||.||++.||+-|.+-|.+..+.++....-.+.....+..      +
T Consensus       154 p~~~~-~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~l  232 (318)
T KOG0659|consen  154 PNRIQ-THQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSL  232 (318)
T ss_pred             CCccc-ccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCcccccc
Confidence            44333 334779999999988765 699999999999999999998877776655544332211111111111      1


Q ss_pred             hHhhh------hccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC-CCCCCCCCCccccccc
Q 048419          561 TQAID------QTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG-DSSLPPLPPDIHLKDT  622 (653)
Q Consensus       561 ~~~~d------~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~-~~~~p~~p~~~~~~~~  622 (653)
                      .+...      +.+...-..+...+++|+..++..||.+|+++.|++++-.. ..|+|..|...+.+..
T Consensus       233 pdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~~P~pt~~~~lp~p~~  301 (318)
T KOG0659|consen  233 PDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKHPYFKSLPLPTPPSKLPIPST  301 (318)
T ss_pred             ccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcchhhhcCCCCCChhhCcCCcc
Confidence            11111      11111222345667999999999999999999999987754 3555555555544444

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=100.00  E-value=2.2e-41  Score=354.20  Aligned_cols=256  Identities=26%  Similarity=0.396  Sum_probs=207.6

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC--chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEe
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYD  407 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E  407 (653)
                      +.+.....||+|.||+||+|.+.+   .||||++...  ..+..+.|++|+..+++-+|.||+-+.|||.+... .||+-
T Consensus       392 ~ev~l~~rIGsGsFGtV~Rg~whG---dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~-AIiTq  467 (678)
T KOG0193|consen  392 EEVLLGERIGSGSFGTVYRGRWHG---DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL-AIITQ  467 (678)
T ss_pred             HHhhccceeccccccceeeccccc---ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce-eeeeh
Confidence            344557789999999999999975   4999999765  55678899999999999999999999999999887 99999


Q ss_pred             ccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccC
Q 048419          408 YVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEH  487 (653)
Q Consensus       408 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~  487 (653)
                      +|+|-+|+.+|+...    ..+...+.+.|++|||+|+.|||.   ++|||||||..||||.+++.+||+||||+..-..
T Consensus       468 wCeGsSLY~hlHv~e----tkfdm~~~idIAqQiaqGM~YLHA---K~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~  540 (678)
T KOG0193|consen  468 WCEGSSLYTHLHVQE----TKFDMNTTIDIAQQIAQGMDYLHA---KNIIHRDLKSNNIFLHEDLKVKIGDFGLATVKTR  540 (678)
T ss_pred             hccCchhhhhccchh----hhhhHHHHHHHHHHHHHhhhhhhh---hhhhhhhccccceEEccCCcEEEecccceeeeee
Confidence            999999999998864    448899999999999999999999   9999999999999999999999999999986543


Q ss_pred             CC-CCcccccccCCcccCccccccC---CCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHh
Q 048419          488 GA-NPQTTHIVGTLGYLAPELTRTG---KATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQA  563 (653)
Q Consensus       488 ~~-~~~~~~~~gt~~y~aPE~~~~~---~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~  563 (653)
                      .. .......-|...|||||++...   .|+..+||||||+|+|||+||..||... ..+...     + ....|.+.  
T Consensus       541 w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~-~~dqIi-----f-mVGrG~l~--  611 (678)
T KOG0193|consen  541 WSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQ-NRDQII-----F-MVGRGYLM--  611 (678)
T ss_pred             eccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCC-ChhheE-----E-EecccccC--
Confidence            31 1222334577899999998743   5889999999999999999999999833 222211     0 01111111  


Q ss_pred             hhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcCC
Q 048419          564 IDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLGD  607 (653)
Q Consensus       564 ~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  607 (653)
                        +.+......+.+.+.+|+..||..++++||.+.+|+..|+..
T Consensus       612 --pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l  653 (678)
T KOG0193|consen  612 --PDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEEL  653 (678)
T ss_pred             --ccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHh
Confidence              111112234567899999999999999999999999977654

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=5.7e-40  Score=346.75  Aligned_cols=257  Identities=27%  Similarity=0.362  Sum_probs=212.1

Q ss_pred             HhhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC----ch-hhHHHHHHHHHHHhhcC-CCceeeeeeeecccc
Q 048419          327 SVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN----SQ-QGMKEFVAEIMSMGRLR-HRNLVQLHGWCRKQD  400 (653)
Q Consensus       327 ~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~----~~-~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~  400 (653)
                      ...++|...+.||+|.||+|+.|.+..++..||+|.+...    .. ...+.+.+|+.++++++ ||||++++.++....
T Consensus        14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~   93 (370)
T KOG0583|consen   14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT   93 (370)
T ss_pred             cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence            4456888999999999999999999989999999977553    11 23455668999999999 999999999999999


Q ss_pred             eeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCC-CcEEEEee
Q 048419          401 ELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTY-LNAKLGDF  479 (653)
Q Consensus       401 ~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~-~~~kl~Df  479 (653)
                      .+++||||+.+|+|.+++...     ..+.+....+++.|+++|++|||+   ++|+||||||+||||+.+ +++||+||
T Consensus        94 ~~~ivmEy~~gGdL~~~i~~~-----g~l~E~~ar~~F~Qlisav~y~H~---~gi~HRDLK~ENilld~~~~~~Kl~DF  165 (370)
T KOG0583|consen   94 KIYIVMEYCSGGDLFDYIVNK-----GRLKEDEARKYFRQLISAVAYCHS---RGIVHRDLKPENILLDGNEGNLKLSDF  165 (370)
T ss_pred             eEEEEEEecCCccHHHHHHHc-----CCCChHHHHHHHHHHHHHHHHHHh---CCEeeCCCCHHHEEecCCCCCEEEecc
Confidence            999999999999999999873     348889999999999999999999   999999999999999999 99999999


Q ss_pred             cCcccccCCCCCcccccccCCcccCccccccCC-CC-CccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcc
Q 048419          480 GLAKIYEHGANPQTTHIVGTLGYLAPELTRTGK-AT-TSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLE  557 (653)
Q Consensus       480 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~-~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~  557 (653)
                      |++.... .........+||+.|+|||++.+.. |+ .++||||+||+||.|++|+.||+......   +...       
T Consensus       166 G~s~~~~-~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~---l~~k-------  234 (370)
T KOG0583|consen  166 GLSAISP-GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPN---LYRK-------  234 (370)
T ss_pred             ccccccC-CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHH---HHHH-------
Confidence            9999874 2233455679999999999999877 75 79999999999999999999999743321   1100       


Q ss_pred             cchhHhhhhccCcCCHHH-HHHHHHHHHHcCCCCCCCCCCHHHHHHHHcCCC
Q 048419          558 GEITQAIDQTLDYYDLAE-AELVLNLGLFCSAPNPVYRPDMRRVVEFLLGDS  608 (653)
Q Consensus       558 ~~~~~~~d~~l~~~~~~~-~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  608 (653)
                            +...--.++... ...+..|+.+|+..||..|+++.+++++-+...
T Consensus       235 ------i~~~~~~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w~~~  280 (370)
T KOG0583|consen  235 ------IRKGEFKIPSYLLSPEARSLIEKMLVPDPSTRITLLEILEHPWFQK  280 (370)
T ss_pred             ------HhcCCccCCCCcCCHHHHHHHHHHcCCCcccCCCHHHHhhChhhcc
Confidence                  111000111111 567899999999999999999999997665443

>cd01951 lectin_L-type legume lectins

Probab=100.00  E-value=1.2e-39  Score=323.12  Aligned_cols=204  Identities=28%  Similarity=0.397  Sum_probs=170.5

Q ss_pred             CCeEEecceEecC-CCcEEecCCCCCceEEEEcCCCeecccCCCCceeeeEEEEEEEEecCCCCCCCCceEEEEecCCCC
Q 048419           19 ANLSLEGAAYIST-SGILTVTNKSEGLIGHALYPNPLRFKTSNKSVAIDFRTNFVFSILPKYPDLGGQGLAFIIISTNRP   97 (653)
Q Consensus        19 ~~l~~~g~a~~~~-~g~l~Lt~~~~~~~Gr~~y~~pi~~~~~~~~~~~sF~t~F~f~i~~~~~~~~gdGlaF~l~~~~~~   97 (653)
                      .++.++|+|.+.+ ++.|+||++..+++|++||++||++|       ++|+|+|+|.|.... ..+||||||+|+|....
T Consensus        14 ~~~~~~G~A~~~~~~~~l~Lt~~~~~~~G~~~~~~~i~~~-------~~F~~~F~f~i~~~~-~~~gdG~aF~l~~~~~~   85 (223)
T cd01951          14 SNWQLNGSATLTTDSGVLRLTPDTGNQAGSAWYKTPIDLS-------KDFTTTFKFYLGTKG-TNGADGIAFVLQNDPAG   85 (223)
T ss_pred             hhcEEcccEEecCCCCEEEECCCCCCcEEEEEECCcEecc-------CCEEEEEEEEEeCCC-CCCCCcEEEEEecCCCC
Confidence            5899999999976 78999999999999999999999998       679999999998764 56899999999998765


Q ss_pred             CCCCCC--ccccCCCcccCCCCCCCCceEEEEeecccccccCCCCCCeeeEecCCCCcCC--cccCccccCCCCcccccc
Q 048419           98 ENCLAN--QFLGLPNITMSSSTKFSTRMLAVEFDIIQNTELIDINDNHVGIDISSLISSA--SEPASYYSGNNHRIPILL  173 (653)
Q Consensus        98 ~~~~~g--~~lG~~~~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~~~Hvgid~ns~~s~~--~~~~~~~~~~~~~~~~~l  173 (653)
                      +.+.+|  ++||+...         ++.+||||||++|.+++||+.+|||||+|+..+..  ..+..+.     ..+...
T Consensus        86 ~~~~~g~~~~lG~~~~---------~~~~aVefDT~~N~~~~dp~~~higi~~n~~~~~~~~~~~~~~~-----~~~~~~  151 (223)
T cd01951          86 ALGGGGGGGGLGYGGI---------GNSVAVEFDTYKNDDNNDPNGNHISIDVNGNGNNTALATSLGSA-----SLPNGT  151 (223)
T ss_pred             ccccCCCCCccCcccc---------CCeEEEEEeccccCCCCCCCCCEEEEEcCCCCCCccccccccee-----eCCCcc
Confidence            555555  78887533         34599999999999888999999999999987541  1111111     111122


Q ss_pred             CCCCceEEEEEecCCceEEEEEEeeCCCCCCCCCceeeeecCCcccccceEEeEecccCcccceeeecceeee
Q 048419          174 RSGDPIQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLITASHNVHGWSIS  246 (653)
Q Consensus       174 ~~g~~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~~l~~~~dL~~~l~~~~~vGFsastg~~~~~~~i~sWsf~  246 (653)
                      .+|+.++|||+|++.+++|+|++.....  |..|.++.++||+..++++||||||||||...+.|.|++|+|+
T Consensus       152 ~~g~~~~v~I~Y~~~~~~L~v~l~~~~~--~~~~~l~~~~~l~~~~~~~~yvGFTAsTG~~~~~h~V~~wsf~  222 (223)
T cd01951         152 GLGNEHTVRITYDPTTNTLTVYLDNGST--LTSLDITIPVDLIQLGPTKAYFGFTASTGGLTNLHDILNWSFT  222 (223)
T ss_pred             CCCCEEEEEEEEeCCCCEEEEEECCCCc--cccccEEEeeeecccCCCcEEEEEEcccCCCcceeEEEEEEec
Confidence            2399999999999999999999986654  6678999999999999999999999999999999999999996

The L-type (legume-type) lectins are a highly diverse family of carbohydrate binding proteins that generally display no enzymatic activity toward the sugars they bind. This family includes arcelin, concanavalinA, the lectin-like receptor kinases, the ERGIC-53/VIP36/EMP46 type1 transmembrane proteins, and an alpha-amylase inhibitor. L-type lectins have a dome-shaped beta-barrel carbohydrate recognition domain with a curved seven-stranded beta-sheet referred to as the "front face" and a flat six-stranded beta-sheet referred to as the "back face". This domain homodimerizes so that adjacent back sheets form a contiguous 12-stranded sheet and homotetramers occur by a back-to-back association of these homodimers. Though L-type lectins exhibit both sequence and structural similarity to one another, their carbohydrate binding specificities differ widely.

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.7e-40  Score=346.88  Aligned_cols=250  Identities=27%  Similarity=0.377  Sum_probs=213.8

Q ss_pred             cCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEeccCC
Q 048419          332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPN  411 (653)
Q Consensus       332 f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~  411 (653)
                      |.....||+|..|.||.+....+++.||||++........+-+.+|+.+|+..+|+|||+++..+...+++|.|||||++
T Consensus       275 y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym~g  354 (550)
T KOG0578|consen  275 YTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYMEG  354 (550)
T ss_pred             hcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeecCC
Confidence            55567899999999999999999999999999877766777889999999999999999999999999999999999999


Q ss_pred             CCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCCCC
Q 048419          412 GSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANP  491 (653)
Q Consensus       412 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~  491 (653)
                      |+|.+.+....      +++.++..|++++++||+|||.   ++|+|||||.+||||+.++.+||+|||++..+..... 
T Consensus       355 gsLTDvVt~~~------~~E~qIA~Icre~l~aL~fLH~---~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~-  424 (550)
T KOG0578|consen  355 GSLTDVVTKTR------MTEGQIAAICREILQGLKFLHA---RGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQS-  424 (550)
T ss_pred             Cchhhhhhccc------ccHHHHHHHHHHHHHHHHHHHh---cceeeeccccceeEeccCCcEEEeeeeeeeccccccC-
Confidence            99999986543      8999999999999999999999   9999999999999999999999999999998765543 


Q ss_pred             cccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhccCcC
Q 048419          492 QTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYY  571 (653)
Q Consensus       492 ~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~  571 (653)
                      .....+||+.|||||+.....|.+|.||||||++++||+-|.+||-...+...+.+.      ...+.      +.+ ..
T Consensus       425 KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLI------a~ng~------P~l-k~  491 (550)
T KOG0578|consen  425 KRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLI------ATNGT------PKL-KN  491 (550)
T ss_pred             ccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHH------hhcCC------CCc-CC
Confidence            334568999999999999999999999999999999999999999875543222111      01111      111 11


Q ss_pred             CHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          572 DLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       572 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                      .......+.+++.+||+.|+++||++.|+|++-
T Consensus       492 ~~klS~~~kdFL~~cL~~dv~~RasA~eLL~Hp  524 (550)
T KOG0578|consen  492 PEKLSPELKDFLDRCLVVDVEQRASAKELLEHP  524 (550)
T ss_pred             ccccCHHHHHHHHHHhhcchhcCCCHHHHhcCh
Confidence            223457789999999999999999999999854

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=4.6e-40  Score=333.13  Aligned_cols=262  Identities=26%  Similarity=0.354  Sum_probs=212.1

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC-chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEec
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN-SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDY  408 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~  408 (653)
                      +.|+....||.|..++||+|+....++.||||++... .....+.+.+|+..|+.++||||++++..|..+..+|+||.|
T Consensus        26 ~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmpf  105 (516)
T KOG0582|consen   26 KDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMPF  105 (516)
T ss_pred             cceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeehh
Confidence            5688899999999999999999989999999999754 334478899999999999999999999999999999999999


Q ss_pred             cCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCC
Q 048419          409 VPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHG  488 (653)
Q Consensus       409 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~  488 (653)
                      |.+||+.+++....   ...+++..+..|++++++||.|||.   +|.||||||+.||||+++|.+||+|||....+...
T Consensus       106 Ma~GS~ldIik~~~---~~Gl~E~~Ia~iLre~LkaL~YLH~---~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~  179 (516)
T KOG0582|consen  106 MAGGSLLDIIKTYY---PDGLEEASIATILREVLKALDYLHQ---NGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDS  179 (516)
T ss_pred             hcCCcHHHHHHHHc---cccccHHHHHHHHHHHHHHHHHHHh---cCceecccccccEEEcCCCcEEEcCceeeeeeccc
Confidence            99999999998765   3458999999999999999999999   99999999999999999999999999987655332


Q ss_pred             CCCcc---cccccCCcccCccccccC--CCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHh
Q 048419          489 ANPQT---THIVGTLGYLAPELTRTG--KATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQA  563 (653)
Q Consensus       489 ~~~~~---~~~~gt~~y~aPE~~~~~--~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~  563 (653)
                      ..+..   ....||++|||||++...  .|+.|+||||||++.+||.+|..||....+...+. .      ...+.....
T Consensus       180 G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl-~------tLqn~pp~~  252 (516)
T KOG0582|consen  180 GDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLL-L------TLQNDPPTL  252 (516)
T ss_pred             CceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHH-H------HhcCCCCCc
Confidence            22211   446899999999995433  58999999999999999999999998765532211 1      111221111


Q ss_pred             hhhcc-CcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          564 IDQTL-DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       564 ~d~~l-~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                      .-..+ .+........+.+++..||+.||.+|||+++++++-
T Consensus       253 ~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~  294 (516)
T KOG0582|consen  253 LTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKHA  294 (516)
T ss_pred             ccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccH
Confidence            10011 111112345789999999999999999999999743

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=100.00  E-value=1.4e-40  Score=344.36  Aligned_cols=253  Identities=25%  Similarity=0.360  Sum_probs=210.4

Q ss_pred             hcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC---chhhHHHHHHHHHHHhhc-CCCceeeeeeeecccceeEE
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN---SQQGMKEFVAEIMSMGRL-RHRNLVQLHGWCRKQDELLL  404 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~l  404 (653)
                      .++|...+.||+|+|++|++|+...++++||||++.+.   .....+-...|-..|.+| .||.|++|+.-|.++..+|+
T Consensus        72 ~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYF  151 (604)
T KOG0592|consen   72 PNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYF  151 (604)
T ss_pred             hhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEE
Confidence            35677889999999999999999999999999999654   122234456788899999 89999999999999999999


Q ss_pred             EEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccc
Q 048419          405 VYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKI  484 (653)
Q Consensus       405 V~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~  484 (653)
                      |+||+++|+|.++|...+     .+++...+..+.+|+.||+|||+   +|||||||||+|||||+++++||+|||.|+.
T Consensus       152 vLe~A~nGdll~~i~K~G-----sfde~caR~YAAeIldAleylH~---~GIIHRDlKPENILLd~dmhikITDFGsAK~  223 (604)
T KOG0592|consen  152 VLEYAPNGDLLDLIKKYG-----SFDETCARFYAAEILDALEYLHS---NGIIHRDLKPENILLDKDGHIKITDFGSAKI  223 (604)
T ss_pred             EEEecCCCcHHHHHHHhC-----cchHHHHHHHHHHHHHHHHHHHh---cCceeccCChhheeEcCCCcEEEeecccccc
Confidence            999999999999998764     48888899999999999999999   9999999999999999999999999999998


Q ss_pred             ccCCCCC------------cccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHH
Q 048419          485 YEHGANP------------QTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVK  552 (653)
Q Consensus       485 ~~~~~~~------------~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~  552 (653)
                      +......            ....++||..|.+||++..+..+..+|+|+|||+||+|+.|.+||....+-   .+-+.+ 
T Consensus       224 l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Ney---liFqkI-  299 (604)
T KOG0592|consen  224 LSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEY---LIFQKI-  299 (604)
T ss_pred             CChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHH---HHHHHH-
Confidence            7543211            114478999999999999999999999999999999999999999865432   111111 


Q ss_pred             hhhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          553 ELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       553 ~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                              ..+ +   -.++....+.+.+|+.+.|..||.+|++..||.++.-
T Consensus       300 --------~~l-~---y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~HpF  340 (604)
T KOG0592|consen  300 --------QAL-D---YEFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAHPF  340 (604)
T ss_pred             --------HHh-c---ccCCCCCCHHHHHHHHHHHccCccccccHHHHhhCcc
Confidence                    110 0   1122223467889999999999999999999998774

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=100.00  E-value=3.8e-40  Score=348.94  Aligned_cols=261  Identities=24%  Similarity=0.356  Sum_probs=203.7

Q ss_pred             hcCcCcceeeeeeCcEEEEEEEeC-----CCCcEEEEEEeccCc-hhhHHHHHHHHHHHhhc-CCCceeeeeeeecccc-
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGLMP-----SLGLEVAIKRIGHNS-QQGMKEFVAEIMSMGRL-RHRNLVQLHGWCRKQD-  400 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~-  400 (653)
                      .++|...+.||+|+||.||+|.+.     ..+..||||++.... ....+.+.+|+.++.++ +||||++++++|...+ 
T Consensus         6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~   85 (338)
T cd05102           6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNG   85 (338)
T ss_pred             hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCC
Confidence            467888999999999999999752     335689999986543 33456789999999999 8999999999987654 


Q ss_pred             eeEEEEeccCCCCchhhhhccccc--------------------------------------------------------
Q 048419          401 ELLLVYDYVPNGSLDKLLFDKDHK--------------------------------------------------------  424 (653)
Q Consensus       401 ~~~lV~E~~~~gsL~~~l~~~~~~--------------------------------------------------------  424 (653)
                      .+++||||+++|+|.+++......                                                        
T Consensus        86 ~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (338)
T cd05102          86 PLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDD  165 (338)
T ss_pred             ceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhccc
Confidence            589999999999999998753210                                                        


Q ss_pred             -ccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCCCC-cccccccCCcc
Q 048419          425 -LRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANP-QTTHIVGTLGY  502 (653)
Q Consensus       425 -~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y  502 (653)
                       ....+++.++.+++.||++||+|||+   ++|+||||||+|||++.++.+||+|||+++........ ......++..|
T Consensus       166 ~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y  242 (338)
T cd05102         166 LWKSPLTMEDLICYSFQVARGMEFLAS---RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKW  242 (338)
T ss_pred             cccCCCCHHHHHHHHHHHHHHHHHHHH---CCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccc
Confidence             02357888999999999999999999   99999999999999999999999999999865332211 11223456789


Q ss_pred             cCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhccCcCCHHHHHHHHH
Q 048419          503 LAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYYDLAEAELVLN  581 (653)
Q Consensus       503 ~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~  581 (653)
                      +|||.+.+..++.++|||||||++|||++ |..||........  +...    ...+...        ..+......+.+
T Consensus       243 ~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~--~~~~----~~~~~~~--------~~~~~~~~~l~~  308 (338)
T cd05102         243 MAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEE--FCQR----LKDGTRM--------RAPENATPEIYR  308 (338)
T ss_pred             cCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHH--HHHH----HhcCCCC--------CCCCCCCHHHHH
Confidence            99999998899999999999999999997 9999875432211  1111    1111100        011123456889


Q ss_pred             HHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          582 LGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       582 l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                      |+.+||+.||.+|||+.||++.|+.
T Consensus       309 li~~cl~~dp~~RPs~~el~~~l~~  333 (338)
T cd05102         309 IMLACWQGDPKERPTFSALVEILGD  333 (338)
T ss_pred             HHHHHccCChhhCcCHHHHHHHHHH
Confidence            9999999999999999999999974

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=100.00  E-value=1.5e-39  Score=343.04  Aligned_cols=247  Identities=22%  Similarity=0.285  Sum_probs=204.6

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC---chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN---SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVY  406 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  406 (653)
                      ++|...+.||+|+||.||+|.+..+++.||||++...   .....+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus        18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   97 (329)
T PTZ00263         18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL   97 (329)
T ss_pred             hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence            4688899999999999999999989999999998643   2234567889999999999999999999999999999999


Q ss_pred             eccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccccc
Q 048419          407 DYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE  486 (653)
Q Consensus       407 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~  486 (653)
                      ||+++|+|.+++...     ..+++..+..++.||+.||+|||+   ++|+||||||+|||++.++.+||+|||+++...
T Consensus        98 e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~  169 (329)
T PTZ00263         98 EFVVGGELFTHLRKA-----GRFPNDVAKFYHAELVLAFEYLHS---KDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVP  169 (329)
T ss_pred             cCCCCChHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHEEECCCCCEEEeeccCceEcC
Confidence            999999999998754     347888899999999999999999   999999999999999999999999999998654


Q ss_pred             CCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhh
Q 048419          487 HGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQ  566 (653)
Q Consensus       487 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  566 (653)
                      ..    .....||+.|+|||.+.+..++.++|||||||++|||++|+.||.......   ....+.    .+.       
T Consensus       170 ~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~---~~~~i~----~~~-------  231 (329)
T PTZ00263        170 DR----TFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFR---IYEKIL----AGR-------  231 (329)
T ss_pred             CC----cceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHH---HHHHHh----cCC-------
Confidence            32    223578999999999999889999999999999999999999997544321   111111    111       


Q ss_pred             ccCcCCHHHHHHHHHHHHHcCCCCCCCCCC-----HHHHHHHH
Q 048419          567 TLDYYDLAEAELVLNLGLFCSAPNPVYRPD-----MRRVVEFL  604 (653)
Q Consensus       567 ~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs-----~~evl~~L  604 (653)
                       + ..+......+.+++.+||+.||.+||+     +.+++.+-
T Consensus       232 -~-~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp  272 (329)
T PTZ00263        232 -L-KFPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHP  272 (329)
T ss_pred             -c-CCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCC
Confidence             0 001112356789999999999999997     78888764

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=100.00  E-value=1.4e-39  Score=336.15  Aligned_cols=254  Identities=25%  Similarity=0.315  Sum_probs=204.9

Q ss_pred             CcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc---hhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEe
Q 048419          331 GFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS---QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYD  407 (653)
Q Consensus       331 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E  407 (653)
                      .|+..+.||+|+||.||+|.+..+++.||||.+....   ......+.+|+.++++++|+|++++++++.+.+..++|||
T Consensus         1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e   80 (285)
T cd05631           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLT   80 (285)
T ss_pred             CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEE
Confidence            3677899999999999999998889999999986432   2234567899999999999999999999999999999999


Q ss_pred             ccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccC
Q 048419          408 YVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEH  487 (653)
Q Consensus       408 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~  487 (653)
                      |+++|+|..++....   ...+++.+++.++.|++.||+|||+   ++|+||||||+|||+++++.+||+|||++.....
T Consensus        81 ~~~~g~L~~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~  154 (285)
T cd05631          81 IMNGGDLKFHIYNMG---NPGFDEQRAIFYAAELCCGLEDLQR---ERIVYRDLKPENILLDDRGHIRISDLGLAVQIPE  154 (285)
T ss_pred             ecCCCcHHHHHHhhC---CCCCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCC
Confidence            999999998886543   2358899999999999999999999   9999999999999999999999999999986533


Q ss_pred             CCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhc
Q 048419          488 GANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQT  567 (653)
Q Consensus       488 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~  567 (653)
                      ..  ......|+..|+|||++.+..++.++|||||||++|||++|+.||..........   .+.....         ..
T Consensus       155 ~~--~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~---~~~~~~~---------~~  220 (285)
T cd05631         155 GE--TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKRE---EVDRRVK---------ED  220 (285)
T ss_pred             CC--eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHH---HHHHHhh---------cc
Confidence            22  2233468999999999999999999999999999999999999998643321100   0000000         00


Q ss_pred             cCcCCHHHHHHHHHHHHHcCCCCCCCCCC-----HHHHHHHH
Q 048419          568 LDYYDLAEAELVLNLGLFCSAPNPVYRPD-----MRRVVEFL  604 (653)
Q Consensus       568 l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs-----~~evl~~L  604 (653)
                      ...+.......+.+|+.+||+.||.+||+     +.+++++-
T Consensus       221 ~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~  262 (285)
T cd05631         221 QEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHP  262 (285)
T ss_pred             cccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCH
Confidence            01112223467889999999999999997     88888753

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=100.00  E-value=2.8e-39  Score=388.24  Aligned_cols=261  Identities=28%  Similarity=0.521  Sum_probs=215.4

Q ss_pred             hcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEec
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDY  408 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~  408 (653)
                      ...|...++||+|+||.||+|+...++..||||++......    ...|++.+++++|||||+++++|.+.+..++||||
T Consensus       689 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~----~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey  764 (968)
T PLN00113        689 LSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI----PSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEY  764 (968)
T ss_pred             HhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc----cHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeC
Confidence            45677889999999999999999888999999998643321    13468899999999999999999999999999999


Q ss_pred             cCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCC
Q 048419          409 VPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHG  488 (653)
Q Consensus       409 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~  488 (653)
                      +++|+|.++++.        ++|.++.+++.|+|+||+|||..+.++|+||||||+||+++.++.+++. +|....... 
T Consensus       765 ~~~g~L~~~l~~--------l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~-  834 (968)
T PLN00113        765 IEGKNLSEVLRN--------LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCT-  834 (968)
T ss_pred             CCCCcHHHHHhc--------CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-ecccccccc-
Confidence            999999999842        7899999999999999999997666899999999999999999998876 666543321 


Q ss_pred             CCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhcc
Q 048419          489 ANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTL  568 (653)
Q Consensus       489 ~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l  568 (653)
                          .....++..|+|||++.+..++.++|||||||++|||+||+.|++.... ....+.+|++...........+|+.+
T Consensus       835 ----~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  909 (968)
T PLN00113        835 ----DTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFG-VHGSIVEWARYCYSDCHLDMWIDPSI  909 (968)
T ss_pred             ----CCCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccC-CCCcHHHHHHHhcCccchhheeCccc
Confidence                1223678999999999999999999999999999999999999864322 22345667766555555556666666


Q ss_pred             C---cCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcCCC
Q 048419          569 D---YYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLGDS  608 (653)
Q Consensus       569 ~---~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  608 (653)
                      .   ....++..++.+++.+||+.||++||+|+||++.|+...
T Consensus       910 ~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~  952 (968)
T PLN00113        910 RGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESAS  952 (968)
T ss_pred             cCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhh
Confidence            2   234566778999999999999999999999999998653

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.1e-39  Score=342.51  Aligned_cols=256  Identities=24%  Similarity=0.322  Sum_probs=208.1

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc---hhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS---QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVY  406 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  406 (653)
                      ++|+..+.||+|+||.||+|.+..+++.||||++....   ....+.+..|++++.+++||||+++++++...+..++||
T Consensus         1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~   80 (333)
T cd05600           1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM   80 (333)
T ss_pred             CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence            46888999999999999999999889999999996542   234567889999999999999999999999999999999


Q ss_pred             eccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccccc
Q 048419          407 DYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE  486 (653)
Q Consensus       407 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~  486 (653)
                      ||+++|+|.+++...     ..+++.++..++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+++...
T Consensus        81 e~~~g~~L~~~l~~~-----~~l~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~  152 (333)
T cd05600          81 EYVPGGDFRTLLNNL-----GVLSEDHARFYMAEMFEAVDALHE---LGYIHRDLKPENFLIDASGHIKLTDFGLSKGIV  152 (333)
T ss_pred             eCCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEECCCCCEEEEeCcCCcccc
Confidence            999999999999653     348899999999999999999999   899999999999999999999999999998653


Q ss_pred             CCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhh
Q 048419          487 HGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQ  566 (653)
Q Consensus       487 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  566 (653)
                      .    ......||+.|+|||++.+..++.++|||||||++|||++|+.||......+...   .+...  ...+.   .+
T Consensus       153 ~----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~---~i~~~--~~~~~---~~  220 (333)
T cd05600         153 T----YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWE---NLKYW--KETLQ---RP  220 (333)
T ss_pred             c----ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHH---HHHhc--ccccc---CC
Confidence            3    2234578999999999998899999999999999999999999997654322111   01000  00000   00


Q ss_pred             ccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          567 TLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       567 ~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                      ............+.+++.+||+.+|.+||++.+++++..
T Consensus       221 ~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h~~  259 (333)
T cd05600         221 VYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNHPF  259 (333)
T ss_pred             CCCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhCcc
Confidence            000001123467889999999999999999999998753

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=100.00  E-value=1.6e-39  Score=335.77  Aligned_cols=266  Identities=23%  Similarity=0.297  Sum_probs=206.5

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC--chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEe
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYD  407 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E  407 (653)
                      ++|+..+.||+|+||.||+|++..+++.||||++...  .....+.+.+|+.++++++|+||+++++++...+..++|||
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   80 (287)
T cd07848           1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE   80 (287)
T ss_pred             CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence            4688899999999999999999988999999998654  23345678899999999999999999999999999999999


Q ss_pred             ccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccC
Q 048419          408 YVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEH  487 (653)
Q Consensus       408 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~  487 (653)
                      |++++.|..+...     ...+++..++.++.|++.||.|||+   .+++||||||+||+++.++.+||+|||++.....
T Consensus        81 ~~~~~~l~~~~~~-----~~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~  152 (287)
T cd07848          81 YVEKNMLELLEEM-----PNGVPPEKVRSYIYQLIKAIHWCHK---NDIVHRDIKPENLLISHNDVLKLCDFGFARNLSE  152 (287)
T ss_pred             cCCCCHHHHHHhc-----CCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCcEEEeeccCcccccc
Confidence            9998777655432     2348889999999999999999999   8999999999999999999999999999987644


Q ss_pred             CCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhh---------hccc
Q 048419          488 GANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKEL---------HLEG  558 (653)
Q Consensus       488 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~---------~~~~  558 (653)
                      ..........|++.|+|||++.+..++.++|||||||++|||++|+.||......+...........         ....
T Consensus       153 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (287)
T cd07848         153 GSNANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNP  232 (287)
T ss_pred             cccccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccc
Confidence            3332333457899999999998888999999999999999999999999765443322211111100         0000


Q ss_pred             chhHhhhhccC-------cCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 048419          559 EITQAIDQTLD-------YYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEF  603 (653)
Q Consensus       559 ~~~~~~d~~l~-------~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  603 (653)
                      .......+...       .........+.+++.+||+.||++|||+.|++++
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~h  284 (287)
T cd07848         233 RFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNH  284 (287)
T ss_pred             hhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence            00000000000       0001124569999999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=100.00  E-value=2.2e-40  Score=342.56  Aligned_cols=249  Identities=27%  Similarity=0.384  Sum_probs=213.4

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC--chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEe
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYD  407 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E  407 (653)
                      ++|...+.||+|.||.||||+.+.+.+.||+|.+.+.  ...+.+.+.+|++++++|+||||+.+++||+...++++|.|
T Consensus         2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte   81 (808)
T KOG0597|consen    2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE   81 (808)
T ss_pred             cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence            4677788999999999999999999999999999764  34457789999999999999999999999999999999999


Q ss_pred             ccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccC
Q 048419          408 YVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEH  487 (653)
Q Consensus       408 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~  487 (653)
                      |+.| +|..+|....     .+++++...|+.++..||.|||+   .+|+|||+||.||||+..+.+|+||||+|+.+..
T Consensus        82 ~a~g-~L~~il~~d~-----~lpEe~v~~~a~~LVsaL~yLhs---~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~  152 (808)
T KOG0597|consen   82 YAVG-DLFTILEQDG-----KLPEEQVRAIAYDLVSALYYLHS---NRILHRDMKPQNILLEKGGTLKLCDFGLARAMST  152 (808)
T ss_pred             hhhh-hHHHHHHhcc-----CCCHHHHHHHHHHHHHHHHHHHh---cCcccccCCcceeeecCCCceeechhhhhhhccc
Confidence            9976 9999998754     49999999999999999999999   9999999999999999999999999999998765


Q ss_pred             CCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhc
Q 048419          488 GANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQT  567 (653)
Q Consensus       488 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~  567 (653)
                      .. ...+...||+-|||||...+..|+..+|+||+||++||+.+|++||......      +.++....++         
T Consensus       153 ~t-~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~------~Lv~~I~~d~---------  216 (808)
T KOG0597|consen  153 NT-SVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSIT------QLVKSILKDP---------  216 (808)
T ss_pred             Cc-eeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHH------HHHHHHhcCC---------
Confidence            33 3456678999999999999999999999999999999999999999754321      1111111111         


Q ss_pred             cCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          568 LDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       568 l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                       -.++......+..++...|..||..|.+-.+++.+-
T Consensus       217 -v~~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~Hp  252 (808)
T KOG0597|consen  217 -VKPPSTASSSFVNFLQGLLIKDPAQRLTWTDLLGHP  252 (808)
T ss_pred             -CCCcccccHHHHHHHHHHhhcChhhcccHHHHhcCh
Confidence             112234557788999999999999999999999754

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.6e-39  Score=336.85  Aligned_cols=248  Identities=25%  Similarity=0.278  Sum_probs=205.5

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc---hhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS---QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVY  406 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  406 (653)
                      ++|+..+.||+|+||.||+|....+++.||+|++....   ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   80 (291)
T cd05612           1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM   80 (291)
T ss_pred             CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence            36888999999999999999999889999999986432   234567889999999999999999999999999999999


Q ss_pred             eccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccccc
Q 048419          407 DYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE  486 (653)
Q Consensus       407 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~  486 (653)
                      ||+++|+|.+++...     ..+++..++.++.|++.||+|||+   ++|+||||||+|||++.++.+||+|||+++...
T Consensus        81 e~~~~~~L~~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~  152 (291)
T cd05612          81 EYVPGGELFSYLRNS-----GRFSNSTGLFYASEIVCALEYLHS---KEIVYRDLKPENILLDKEGHIKLTDFGFAKKLR  152 (291)
T ss_pred             eCCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHeEECCCCCEEEEecCcchhcc
Confidence            999999999998654     348889999999999999999999   999999999999999999999999999998654


Q ss_pred             CCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhh
Q 048419          487 HGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQ  566 (653)
Q Consensus       487 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  566 (653)
                      ..    .....|++.|+|||.+.+..++.++|||||||++|||++|+.||.......   +.+.+..    +.       
T Consensus       153 ~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~---~~~~i~~----~~-------  214 (291)
T cd05612         153 DR----TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFG---IYEKILA----GK-------  214 (291)
T ss_pred             CC----cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHh----CC-------
Confidence            32    223468999999999998889999999999999999999999997654321   1111110    10       


Q ss_pred             ccCcCCHHHHHHHHHHHHHcCCCCCCCCCC-----HHHHHHHHc
Q 048419          567 TLDYYDLAEAELVLNLGLFCSAPNPVYRPD-----MRRVVEFLL  605 (653)
Q Consensus       567 ~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs-----~~evl~~L~  605 (653)
                       + .++......+.+++.+||+.||.+||+     +.+++++-.
T Consensus       215 -~-~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~  256 (291)
T cd05612         215 -L-EFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRW  256 (291)
T ss_pred             -c-CCCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCcc
Confidence             0 011112456889999999999999995     889887754

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>PHA02988 hypothetical protein; Provisional

Probab=100.00  E-value=4.3e-39  Score=332.22  Aligned_cols=258  Identities=17%  Similarity=0.280  Sum_probs=204.9

Q ss_pred             CcccCHHHHHHhhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchh---hHHHHHHHHHHHhhcCCCceeeee
Q 048419          317 ARRFKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQ---GMKEFVAEIMSMGRLRHRNLVQLH  393 (653)
Q Consensus       317 ~~~f~~~el~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~H~niv~l~  393 (653)
                      .+.+++.++.     ......||+|++|.||+|.+.  |+.||||++......   ..+.+.+|+.+|++++||||++++
T Consensus        12 ~~~i~~~~i~-----~~~~~~i~~g~~~~v~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~   84 (283)
T PHA02988         12 IKCIESDDID-----KYTSVLIKENDQNSIYKGIFN--NKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIY   84 (283)
T ss_pred             ceecCHHHcC-----CCCCeEEeeCCceEEEEEEEC--CEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEe
Confidence            3455666662     223468999999999999984  789999999764332   257788999999999999999999


Q ss_pred             eeecc----cceeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEc
Q 048419          394 GWCRK----QDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLD  469 (653)
Q Consensus       394 g~~~~----~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~  469 (653)
                      |++.+    ....++||||+++|+|.+++...     ..++|...++++.|++.||.|||+.  .+++||||||+||+++
T Consensus        85 g~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~-----~~~~~~~~~~i~~~i~~~l~~lH~~--~~~~Hrdlkp~nill~  157 (283)
T PHA02988         85 GFIIDIVDDLPRLSLILEYCTRGYLREVLDKE-----KDLSFKTKLDMAIDCCKGLYNLYKY--TNKPYKNLTSVSFLVT  157 (283)
T ss_pred             eeEEecccCCCceEEEEEeCCCCcHHHHHhhC-----CCCChhHHHHHHHHHHHHHHHHHhc--CCCCCCcCChhhEEEC
Confidence            99876    34689999999999999999764     3488999999999999999999972  3788999999999999


Q ss_pred             CCCcEEEEeecCcccccCCCCCcccccccCCcccCcccccc--CCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHH
Q 048419          470 TYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRT--GKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLL  547 (653)
Q Consensus       470 ~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l  547 (653)
                      +++.+||+|||+++......    ....|+..|+|||++.+  ..++.++|||||||++|||++|+.||......+   +
T Consensus       158 ~~~~~kl~dfg~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~---~  230 (283)
T PHA02988        158 ENYKLKIICHGLEKILSSPP----FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKE---I  230 (283)
T ss_pred             CCCcEEEcccchHhhhcccc----ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHH---H
Confidence            99999999999998654321    22467889999999976  678999999999999999999999998654321   1


Q ss_pred             HHHHHhhhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          548 VDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       548 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                      ...+....  ..        . ..+......+.+++.+||+.||.+|||+.|+++.|+.
T Consensus       231 ~~~i~~~~--~~--------~-~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~  278 (283)
T PHA02988        231 YDLIINKN--NS--------L-KLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSL  278 (283)
T ss_pred             HHHHHhcC--CC--------C-CCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHH
Confidence            11111000  00        0 0111245678999999999999999999999999864

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=100.00  E-value=2.8e-39  Score=340.16  Aligned_cols=244  Identities=26%  Similarity=0.320  Sum_probs=200.7

Q ss_pred             eeeeeeCcEEEEEEEeCCCCcEEEEEEeccC---chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEeccCCC
Q 048419          336 NLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN---SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNG  412 (653)
Q Consensus       336 ~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~g  412 (653)
                      +.||+|+||.||++....+|+.||||++...   .......+..|+.++++++||||+++++++...+..++||||+++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~   80 (323)
T cd05571           1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG   80 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence            4699999999999999989999999998653   2334567889999999999999999999999999999999999999


Q ss_pred             CchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCCCCc
Q 048419          413 SLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQ  492 (653)
Q Consensus       413 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~  492 (653)
                      +|.+++...     ..+++.++..++.||+.||+|||+   ++|+||||||+|||++.++.+||+|||+++..... ...
T Consensus        81 ~L~~~l~~~-----~~~~~~~~~~~~~qi~~~L~~lH~---~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~-~~~  151 (323)
T cd05571          81 ELFFHLSRE-----RVFSEDRARFYGAEIVSALGYLHS---CDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISD-GAT  151 (323)
T ss_pred             cHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccC-CCc
Confidence            999988653     348899999999999999999999   89999999999999999999999999998753221 122


Q ss_pred             ccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhccCcCC
Q 048419          493 TTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYYD  572 (653)
Q Consensus       493 ~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~  572 (653)
                      .....||+.|+|||.+.+..++.++|||||||++|||++|+.||.......   +...+..    +.         ..++
T Consensus       152 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~---~~~~~~~----~~---------~~~p  215 (323)
T cd05571         152 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEK---LFELILM----EE---------IRFP  215 (323)
T ss_pred             ccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHH---HHHHHHc----CC---------CCCC
Confidence            334579999999999998899999999999999999999999997543321   1111110    00         0111


Q ss_pred             HHHHHHHHHHHHHcCCCCCCCCC-----CHHHHHHHH
Q 048419          573 LAEAELVLNLGLFCSAPNPVYRP-----DMRRVVEFL  604 (653)
Q Consensus       573 ~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~L  604 (653)
                      ......+.+++.+||+.||.+||     ++.+++++-
T Consensus       216 ~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h~  252 (323)
T cd05571         216 RTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHR  252 (323)
T ss_pred             CCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcCC
Confidence            12345688999999999999999     899998753

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=100.00  E-value=3.3e-39  Score=329.91  Aligned_cols=255  Identities=25%  Similarity=0.396  Sum_probs=204.8

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeC---CCCcEEEEEEeccCc-hhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMP---SLGLEVAIKRIGHNS-QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLV  405 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~---~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV  405 (653)
                      ++|+..+.||+|+||.||+|.+.   ..+..||+|.++... ....+.+.+|+..+++++||||+++++++...+..++|
T Consensus         5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv   84 (266)
T cd05064           5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIV   84 (266)
T ss_pred             HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEE
Confidence            56788899999999999999864   346789999987653 33456789999999999999999999999999999999


Q ss_pred             EeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccc
Q 048419          406 YDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIY  485 (653)
Q Consensus       406 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~  485 (653)
                      |||+++|+|.+++....    ..+++.+++.++.|++.||+|||+   ++++||||||+|||++.++.+|++|||.+...
T Consensus        85 ~e~~~~~~L~~~l~~~~----~~l~~~~~~~~~~~i~~al~~lH~---~~iiH~dikp~nili~~~~~~~l~dfg~~~~~  157 (266)
T cd05064          85 TEYMSNGALDSFLRKHE----GQLVAGQLMGMLPGLASGMKYLSE---MGYVHKGLAAHKVLVNSDLVCKISGFRRLQED  157 (266)
T ss_pred             EEeCCCCcHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHHH---CCEeeccccHhhEEEcCCCcEEECCCcccccc
Confidence            99999999999987542    358999999999999999999999   89999999999999999999999999987654


Q ss_pred             cCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhhcccchhHhh
Q 048419          486 EHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELHLEGEITQAI  564 (653)
Q Consensus       486 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  564 (653)
                      ............++..|+|||.+.+..++.++|||||||++||+++ |+.||.......   +.+.+..    +..    
T Consensus       158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~---~~~~~~~----~~~----  226 (266)
T cd05064         158 KSEAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQD---VIKAVED----GFR----  226 (266)
T ss_pred             cccchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH---HHHHHHC----CCC----
Confidence            3221111112335678999999998999999999999999999775 999997654322   1111111    100    


Q ss_pred             hhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          565 DQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       565 d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                          ...+......+.+++..||+.+|.+||++.+|.+.|..
T Consensus       227 ----~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~  264 (266)
T cd05064         227 ----LPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSK  264 (266)
T ss_pred             ----CCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHh
Confidence                00112234678899999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=100.00  E-value=8.1e-39  Score=333.59  Aligned_cols=265  Identities=23%  Similarity=0.363  Sum_probs=204.2

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCC----------------CCcEEEEEEeccC-chhhHHHHHHHHHHHhhcCCCceeee
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPS----------------LGLEVAIKRIGHN-SQQGMKEFVAEIMSMGRLRHRNLVQL  392 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~----------------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l  392 (653)
                      ++|...+.||+|+||.||+|.+..                .+..||+|.+... .......|.+|+.++.+++||||+++
T Consensus         5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~   84 (304)
T cd05096           5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL   84 (304)
T ss_pred             hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence            467788999999999999998532                3457999998754 33445679999999999999999999


Q ss_pred             eeeecccceeEEEEeccCCCCchhhhhccccc--------------ccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEe
Q 048419          393 HGWCRKQDELLLVYDYVPNGSLDKLLFDKDHK--------------LRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVH  458 (653)
Q Consensus       393 ~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~--------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH  458 (653)
                      ++++.+.+..++||||+++|+|.+++......              ....++|.++++++.||+.||.|||+   .+|+|
T Consensus        85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~---~~ivH  161 (304)
T cd05096          85 LGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSS---LNFVH  161 (304)
T ss_pred             EEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHH---CCccc
Confidence            99999999999999999999999998653210              12347889999999999999999999   89999


Q ss_pred             cCCCCCcEEEcCCCcEEEEeecCcccccCCCCC-cccccccCCcccCccccccCCCCCccceeehHHHHHHHHh--CCCC
Q 048419          459 RDVKPSNILLDTYLNAKLGDFGLAKIYEHGANP-QTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC--GRRS  535 (653)
Q Consensus       459 ~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt--G~~p  535 (653)
                      |||||+|||++.++.+||+|||+++........ ......++..|+|||++.+..++.++|||||||++|||++  +..|
T Consensus       162 ~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p  241 (304)
T cd05096         162 RDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQP  241 (304)
T ss_pred             cCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCC
Confidence            999999999999999999999999865432211 1223345788999999988899999999999999999987  5567


Q ss_pred             CChhhhhhHHHHHHHHHhhhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          536 IEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       536 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                      +.......   ....+......... ...    ...+..+...+.+++.+||+.+|.+|||+.||.+.|+
T Consensus       242 ~~~~~~~~---~~~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~  303 (304)
T cd05096         242 YGELTDEQ---VIENAGEFFRDQGR-QVY----LFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLT  303 (304)
T ss_pred             CCcCCHHH---HHHHHHHHhhhccc-ccc----ccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence            76543221   11111111111000 000    0011223467899999999999999999999999986

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=100.00  E-value=5.4e-39  Score=333.02  Aligned_cols=255  Identities=24%  Similarity=0.344  Sum_probs=212.0

Q ss_pred             hcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC---chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEE
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN---SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLV  405 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV  405 (653)
                      .++|+..++||+|+||.||+|+-+++|..+|+|++++.   .....+..+.|-.+|...+++.||+|+..|.+.+.+|||
T Consensus       140 ~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYLi  219 (550)
T KOG0605|consen  140 LDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYLI  219 (550)
T ss_pred             cccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEEE
Confidence            46799999999999999999999999999999999876   345567788999999999999999999999999999999


Q ss_pred             EeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccc
Q 048419          406 YDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIY  485 (653)
Q Consensus       406 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~  485 (653)
                      |||.|||++..+|...+     .|++......+.+++.|+..||+   .|+|||||||+|+|||..|++||+||||+.-+
T Consensus       220 MEylPGGD~mTLL~~~~-----~L~e~~arfYiaE~vlAI~~iH~---~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl  291 (550)
T KOG0605|consen  220 MEYLPGGDMMTLLMRKD-----TLTEDWARFYIAETVLAIESIHQ---LGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGL  291 (550)
T ss_pred             EEecCCccHHHHHHhcC-----cCchHHHHHHHHHHHHHHHHHHH---cCcccccCChhheeecCCCCEeeccccccchh
Confidence            99999999999997754     59999999999999999999999   99999999999999999999999999999532


Q ss_pred             cC---------------C-------CCC------------------------cccccccCCcccCccccccCCCCCccce
Q 048419          486 EH---------------G-------ANP------------------------QTTHIVGTLGYLAPELTRTGKATTSTDV  519 (653)
Q Consensus       486 ~~---------------~-------~~~------------------------~~~~~~gt~~y~aPE~~~~~~~~~ksDV  519 (653)
                      ..               .       ...                        .....+|||.|+|||++.+..|+..+|.
T Consensus       292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDw  371 (550)
T KOG0605|consen  292 DKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDW  371 (550)
T ss_pred             hhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccH
Confidence            11               0       000                        0012469999999999999999999999


Q ss_pred             eehHHHHHHHHhCCCCCChhhhhhH-HHHHHHHHhhhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCC--
Q 048419          520 YSYGILMLEVACGRRSIEPQKAAAE-LLLVDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPD--  596 (653)
Q Consensus       520 ~s~Gvvl~elltG~~p~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs--  596 (653)
                      ||+||++|||+.|.+||...++.+. ..+..|........+             .....+..+||.+|+. ||++|--  
T Consensus       372 WSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~-------------~~~s~eA~DLI~rll~-d~~~RLG~~  437 (550)
T KOG0605|consen  372 WSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPEE-------------VDLSDEAKDLITRLLC-DPENRLGSK  437 (550)
T ss_pred             HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCc-------------CcccHHHHHHHHHHhc-CHHHhcCcc
Confidence            9999999999999999998776543 234444433222111             1123678899999999 9999974  


Q ss_pred             -HHHHHHHHc
Q 048419          597 -MRRVVEFLL  605 (653)
Q Consensus       597 -~~evl~~L~  605 (653)
                       +.||-++-.
T Consensus       438 G~~EIK~HPf  447 (550)
T KOG0605|consen  438 GAEEIKKHPF  447 (550)
T ss_pred             cHHHHhcCCc
Confidence             777776653

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=100.00  E-value=6.5e-40  Score=338.72  Aligned_cols=248  Identities=23%  Similarity=0.389  Sum_probs=206.4

Q ss_pred             ccCHHHHHHhhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecc
Q 048419          319 RFKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRK  398 (653)
Q Consensus       319 ~f~~~el~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~  398 (653)
                      .+.+++|..       .+-||.|+.|.||+|++.  ++.||||+++.-       -..+|+.|++|+|+||+.+.|+|..
T Consensus       120 eiPFe~IsE-------LeWlGSGaQGAVF~Grl~--netVAVKKV~el-------kETdIKHLRkLkH~NII~FkGVCtq  183 (904)
T KOG4721|consen  120 EIPFEEISE-------LEWLGSGAQGAVFLGRLH--NETVAVKKVREL-------KETDIKHLRKLKHPNIITFKGVCTQ  183 (904)
T ss_pred             cCCHHHhhh-------hhhhccCcccceeeeecc--CceehhHHHhhh-------hhhhHHHHHhccCcceeeEeeeecC
Confidence            345666644       568999999999999996  789999998322       1368899999999999999999999


Q ss_pred             cceeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEe
Q 048419          399 QDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGD  478 (653)
Q Consensus       399 ~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D  478 (653)
                      ...+|||||||+.|-|.+.|....     .++......|.++||.|+.|||.   +.|||||||.-||||..+..+||+|
T Consensus       184 sPcyCIiMEfCa~GqL~~VLka~~-----~itp~llv~Wsk~IA~GM~YLH~---hKIIHRDLKSPNiLIs~~d~VKIsD  255 (904)
T KOG4721|consen  184 SPCYCIIMEFCAQGQLYEVLKAGR-----PITPSLLVDWSKGIAGGMNYLHL---HKIIHRDLKSPNILISYDDVVKISD  255 (904)
T ss_pred             CceeEEeeeccccccHHHHHhccC-----ccCHHHHHHHHHHhhhhhHHHHH---hhHhhhccCCCceEeeccceEEecc
Confidence            999999999999999999997643     47778889999999999999999   8999999999999999999999999


Q ss_pred             ecCcccccCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhccc
Q 048419          479 FGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEG  558 (653)
Q Consensus       479 fGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~  558 (653)
                      ||-++.....  .....++||..|||||++.+...++|.||||||||||||+||..||...+...      .+|.     
T Consensus       256 FGTS~e~~~~--STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssA------IIwG-----  322 (904)
T KOG4721|consen  256 FGTSKELSDK--STKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSA------IIWG-----  322 (904)
T ss_pred             ccchHhhhhh--hhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchhe------eEEe-----
Confidence            9999876432  22334789999999999999999999999999999999999999997644321      1111     


Q ss_pred             chhHhhhhcc-CcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcCC
Q 048419          559 EITQAIDQTL-DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLGD  607 (653)
Q Consensus       559 ~~~~~~d~~l-~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  607 (653)
                          +-...| ...+..+++-+.-|+..||+..|..||++++++.+|+-.
T Consensus       323 ----VGsNsL~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~HldIa  368 (904)
T KOG4721|consen  323 ----VGSNSLHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDIA  368 (904)
T ss_pred             ----ccCCcccccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhhc
Confidence                111112 123345677888999999999999999999999999754

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.5e-39  Score=367.17  Aligned_cols=257  Identities=27%  Similarity=0.435  Sum_probs=210.4

Q ss_pred             cCcceeeeeeCcEEEEEEEeCCCC-----cEEEEEEeccC-chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEE
Q 048419          332 FGEQNLVGSGGFGRVYRGLMPSLG-----LEVAIKRIGHN-SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLV  405 (653)
Q Consensus       332 f~~~~~LG~G~fg~Vy~~~~~~~~-----~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV  405 (653)
                      ....+.||+|.||.||+|...+..     ..||||.+.+. +.+...+|++|..+|++++|||||+++|.|.+....+|+
T Consensus       694 v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~i~  773 (1025)
T KOG1095|consen  694 VTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPLIL  773 (1025)
T ss_pred             eEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcEEE
Confidence            445678999999999999976533     34999999765 566788999999999999999999999999999999999


Q ss_pred             EeccCCCCchhhhhccccc--ccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcc
Q 048419          406 YDYVPNGSLDKLLFDKDHK--LRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK  483 (653)
Q Consensus       406 ~E~~~~gsL~~~l~~~~~~--~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~  483 (653)
                      +|||++|+|..+|++....  ....|+..+.+.++.|||+|+.||++   +++|||||.++|+||++...+||+|||||+
T Consensus       774 leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~---~~fvHRDLAaRNCLL~~~r~VKIaDFGlAr  850 (1025)
T KOG1095|consen  774 LEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLES---KHFVHRDLAARNCLLDERRVVKIADFGLAR  850 (1025)
T ss_pred             ehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHh---CCCcCcchhhhheeecccCcEEEcccchhH
Confidence            9999999999999886321  13468999999999999999999999   999999999999999999999999999999


Q ss_pred             cccCCCC-CcccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhhcccchh
Q 048419          484 IYEHGAN-PQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELHLEGEIT  561 (653)
Q Consensus       484 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~  561 (653)
                      .+..... .......-...|||||.+..+.++.|+|||||||+|||++| |..||....+.+...  .+.    ..+   
T Consensus       851 Diy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~--~~~----~gg---  921 (1025)
T KOG1095|consen  851 DIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLL--DVL----EGG---  921 (1025)
T ss_pred             hhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHH--HHH----hCC---
Confidence            4433222 22222233568999999999999999999999999999999 778887665532211  111    112   


Q ss_pred             HhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          562 QAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       562 ~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                           +| ..+..+.+.+.+|+..||+.+|++||++..|++.+..
T Consensus       922 -----RL-~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~  960 (1025)
T KOG1095|consen  922 -----RL-DPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPA  960 (1025)
T ss_pred             -----cc-CCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhh
Confidence                 12 2344567788999999999999999999999997754

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=100.00  E-value=5.2e-39  Score=344.85  Aligned_cols=260  Identities=23%  Similarity=0.339  Sum_probs=204.5

Q ss_pred             cCcCcceeeeeeCcEEEEEEEe-----CCCCcEEEEEEeccCc-hhhHHHHHHHHHHHhhc-CCCceeeeeeeeccccee
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLM-----PSLGLEVAIKRIGHNS-QQGMKEFVAEIMSMGRL-RHRNLVQLHGWCRKQDEL  402 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~-----~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~  402 (653)
                      ++|+..+.||+|+||.||+|..     .+++..||||+++... ....+.+.+|+.+++.+ +||||++++++|...+..
T Consensus        35 ~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~~  114 (375)
T cd05104          35 NRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGPT  114 (375)
T ss_pred             HHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCcc
Confidence            4678889999999999999974     3456789999986442 33456788999999999 899999999999999999


Q ss_pred             EEEEeccCCCCchhhhhccccc----------------------------------------------------------
Q 048419          403 LLVYDYVPNGSLDKLLFDKDHK----------------------------------------------------------  424 (653)
Q Consensus       403 ~lV~E~~~~gsL~~~l~~~~~~----------------------------------------------------------  424 (653)
                      ++|||||++|+|.+++......                                                          
T Consensus       115 ~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (375)
T cd05104         115 LVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGSY  194 (375)
T ss_pred             eeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccccccccccee
Confidence            9999999999999998653210                                                          


Q ss_pred             ------------ccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCCCCc
Q 048419          425 ------------LRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQ  492 (653)
Q Consensus       425 ------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~  492 (653)
                                  ....++|..+++++.||++||.|||+   ++|+||||||+|||++.++.+||+|||+++.........
T Consensus       195 ~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~  271 (375)
T cd05104         195 IDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLAS---KNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYV  271 (375)
T ss_pred             cccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCchhhEEEECCCcEEEecCccceeccCccccc
Confidence                        01247889999999999999999999   899999999999999999999999999998654322111


Q ss_pred             -ccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhccCc
Q 048419          493 -TTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDY  570 (653)
Q Consensus       493 -~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~  570 (653)
                       .....++..|+|||.+.+..++.++|||||||++|||++ |..||.......  .+..++......            .
T Consensus       272 ~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~--~~~~~~~~~~~~------------~  337 (375)
T cd05104         272 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDS--KFYKMIKEGYRM------------L  337 (375)
T ss_pred             ccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchH--HHHHHHHhCccC------------C
Confidence             112334668999999999999999999999999999998 888886543221  111222111100            0


Q ss_pred             CCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          571 YDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       571 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                      .+......+.+|+.+||+.||++||++.||++.|+.
T Consensus       338 ~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~  373 (375)
T cd05104         338 SPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQ  373 (375)
T ss_pred             CCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHh
Confidence            001123568899999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=100.00  E-value=1.8e-39  Score=330.62  Aligned_cols=250  Identities=33%  Similarity=0.566  Sum_probs=196.1

Q ss_pred             cceeeeeeCcEEEEEEEeC----CCCcEEEEEEeccC-chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEec
Q 048419          334 EQNLVGSGGFGRVYRGLMP----SLGLEVAIKRIGHN-SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDY  408 (653)
Q Consensus       334 ~~~~LG~G~fg~Vy~~~~~----~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~  408 (653)
                      ..+.||.|.||.||+|.+.    ..+..|+||.+... ..+..+.|.+|++.+++++||||++++|+|...+..++|+||
T Consensus         3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~   82 (259)
T PF07714_consen    3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEY   82 (259)
T ss_dssp             EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE-
T ss_pred             EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccccccccccc
Confidence            3578999999999999987    34678999999654 344578999999999999999999999999988889999999


Q ss_pred             cCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCC
Q 048419          409 VPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHG  488 (653)
Q Consensus       409 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~  488 (653)
                      +++|+|.++|....   ...+++.++++|+.||++||.|||+   ++++|+||+++||++++++.+||+|||++......
T Consensus        83 ~~~g~L~~~L~~~~---~~~~~~~~~~~i~~~i~~~l~~Lh~---~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~  156 (259)
T PF07714_consen   83 CPGGSLDDYLKSKN---KEPLSEQQRLSIAIQIAEALSYLHS---NNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEK  156 (259)
T ss_dssp             -TTEBHHHHHHHTC---TTTSBHHHHHHHHHHHHHHHHHHHH---TTEEEST-SGGGEEEETTTEEEEESTTTGEETTTS
T ss_pred             cccccccccccccc---ccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccccc
Confidence            99999999998862   3458999999999999999999999   89999999999999999999999999999876322


Q ss_pred             CC-CcccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhh
Q 048419          489 AN-PQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQ  566 (653)
Q Consensus       489 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  566 (653)
                      .. ...........|+|||.+....++.++||||||+++|||++ |+.|+.......   +...+..    +...     
T Consensus       157 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~---~~~~~~~----~~~~-----  224 (259)
T PF07714_consen  157 SKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEE---IIEKLKQ----GQRL-----  224 (259)
T ss_dssp             SSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHH---HHHHHHT----TEET-----
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccccccccc---ccccccc----cccc-----
Confidence            11 11223356778999999999899999999999999999999 678886553321   1111111    1111     


Q ss_pred             ccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          567 TLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       567 ~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                         ..+......+.+++..||+.+|.+||++.++++.|
T Consensus       225 ---~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L  259 (259)
T PF07714_consen  225 ---PIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL  259 (259)
T ss_dssp             ---TSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred             ---eeccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence               11112346688999999999999999999999986

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=100.00  E-value=9.1e-39  Score=325.89  Aligned_cols=255  Identities=22%  Similarity=0.367  Sum_probs=207.8

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEecc
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYV  409 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~  409 (653)
                      .+|...+.||+|++|.||+|.....++.||+|.+... ....+++.+|++.+++++|+||++++++|...+..+++|||+
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   84 (263)
T cd05052           6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM   84 (263)
T ss_pred             HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCC-chHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeC
Confidence            3477788999999999999999888999999998644 334567899999999999999999999999999999999999


Q ss_pred             CCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCC
Q 048419          410 PNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGA  489 (653)
Q Consensus       410 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~  489 (653)
                      ++++|.+++....   ...+++..++.++.|+++||+|||+   ++++||||||+||++++++.+||+|||++.......
T Consensus        85 ~~~~L~~~~~~~~---~~~l~~~~~~~~~~ql~~~l~~lH~---~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~  158 (263)
T cd05052          85 TYGNLLDYLRECN---RQEVNAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT  158 (263)
T ss_pred             CCCcHHHHHHhCC---CCCCCHHHHHHHHHHHHHHHHHHHh---CCEeecccCcceEEEcCCCcEEeCCCccccccccce
Confidence            9999999986543   3458999999999999999999999   899999999999999999999999999998765432


Q ss_pred             CCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhcc
Q 048419          490 NPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTL  568 (653)
Q Consensus       490 ~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l  568 (653)
                      ........++..|+|||.+.+..++.++|||||||++|||++ |..|+.......   +........         .   
T Consensus       159 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~---~~~~~~~~~---------~---  223 (263)
T cd05052         159 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ---VYELLEKGY---------R---  223 (263)
T ss_pred             eeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH---HHHHHHCCC---------C---
Confidence            222222234668999999988899999999999999999998 888886543221   111111100         0   


Q ss_pred             CcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          569 DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       569 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                      ...+......+.+++.+||+.+|++||++.++++.|+.
T Consensus       224 ~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~  261 (263)
T cd05052         224 MERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFET  261 (263)
T ss_pred             CCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHh
Confidence            01111234678899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=100.00  E-value=7.3e-39  Score=309.07  Aligned_cols=236  Identities=25%  Similarity=0.327  Sum_probs=200.4

Q ss_pred             CcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC---chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEe
Q 048419          331 GFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN---SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYD  407 (653)
Q Consensus       331 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E  407 (653)
                      +|+..+.||.|+||.|.+++.+.+|..+|+|++++.   .....+...+|..+|+.+.||.++++.+.|.+.+.+++|||
T Consensus        45 dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvme  124 (355)
T KOG0616|consen   45 DFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVME  124 (355)
T ss_pred             hhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEEe
Confidence            467789999999999999999999999999999764   23445677889999999999999999999999999999999


Q ss_pred             ccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccC
Q 048419          408 YVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEH  487 (653)
Q Consensus       408 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~  487 (653)
                      |.+||.|..+|+...     .++++..+-++.||+.||+|||+   .+|++|||||+|||||.+|.+||.|||.|+....
T Consensus       125 yv~GGElFS~Lrk~~-----rF~e~~arFYAAeivlAleylH~---~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~  196 (355)
T KOG0616|consen  125 YVPGGELFSYLRKSG-----RFSEPHARFYAAEIVLALEYLHS---LDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSG  196 (355)
T ss_pred             ccCCccHHHHHHhcC-----CCCchhHHHHHHHHHHHHHHHHh---cCeeeccCChHHeeeccCCcEEEEeccceEEecC
Confidence            999999999998754     48999999999999999999999   9999999999999999999999999999997654


Q ss_pred             CCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhc
Q 048419          488 GANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQT  567 (653)
Q Consensus       488 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~  567 (653)
                          .+...+||+.|+|||++.+..+..++|-|+|||++|||+.|..||....+..   +.+            .++...
T Consensus       197 ----rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~---iY~------------KI~~~~  257 (355)
T KOG0616|consen  197 ----RTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQ---IYE------------KILEGK  257 (355)
T ss_pred             ----cEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHH---HHH------------HHHhCc
Confidence                3566899999999999999999999999999999999999999998765421   111            011111


Q ss_pred             cCcCCHHHHHHHHHHHHHcCCCCCCCC
Q 048419          568 LDYYDLAEAELVLNLGLFCSAPNPVYR  594 (653)
Q Consensus       568 l~~~~~~~~~~l~~l~~~Cl~~dP~~R  594 (653)
                       -.++......+.+|+...++.|-.+|
T Consensus       258 -v~fP~~fs~~~kdLl~~LL~vD~t~R  283 (355)
T KOG0616|consen  258 -VKFPSYFSSDAKDLLKKLLQVDLTKR  283 (355)
T ss_pred             -ccCCcccCHHHHHHHHHHHhhhhHhh
Confidence             11222334567778888888888888

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3.1e-40  Score=334.44  Aligned_cols=249  Identities=27%  Similarity=0.400  Sum_probs=212.2

Q ss_pred             CcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC-chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEecc
Q 048419          331 GFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN-SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYV  409 (653)
Q Consensus       331 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~  409 (653)
                      .|.....||+|.||.||||.+..+++.||+|++... .....++..+|+.+|.+++++||.+++|.+.....++++||||
T Consensus        14 ~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey~   93 (467)
T KOG0201|consen   14 LYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEYC   93 (467)
T ss_pred             ccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHHh
Confidence            456678899999999999999999999999999765 4556788999999999999999999999999999999999999


Q ss_pred             CCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCC
Q 048419          410 PNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGA  489 (653)
Q Consensus       410 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~  489 (653)
                      .+|++.+.|....     .+.+..+.-|++++..||.|||.   ++.+|||||+.|||+..+|.+||+|||.+..+....
T Consensus        94 ~gGsv~~lL~~~~-----~~~E~~i~~ilre~l~~l~ylH~---~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~  165 (467)
T KOG0201|consen   94 GGGSVLDLLKSGN-----ILDEFEIAVILREVLKGLDYLHS---EKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTV  165 (467)
T ss_pred             cCcchhhhhccCC-----CCccceeeeehHHHHHHhhhhhh---cceecccccccceeEeccCcEEEEecceeeeeechh
Confidence            9999999997643     35777788899999999999999   899999999999999999999999999998776554


Q ss_pred             CCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhccC
Q 048419          490 NPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLD  569 (653)
Q Consensus       490 ~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~  569 (653)
                      ... ...+||+.|||||++....|+.|+||||||++.+||++|.+|+....+....            -.+.+-..|.|.
T Consensus       166 ~rr-~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvl------------flIpk~~PP~L~  232 (467)
T KOG0201|consen  166 KRR-KTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVL------------FLIPKSAPPRLD  232 (467)
T ss_pred             hcc-ccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEE------------EeccCCCCCccc
Confidence            443 5679999999999999889999999999999999999999999865542111            112222223332


Q ss_pred             cCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 048419          570 YYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEF  603 (653)
Q Consensus       570 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  603 (653)
                         ....+.+.+++..||+.||+.||++.+++++
T Consensus       233 ---~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh  263 (467)
T KOG0201|consen  233 ---GDFSPPFKEFVEACLDKNPEFRPSAKELLKH  263 (467)
T ss_pred             ---cccCHHHHHHHHHHhhcCcccCcCHHHHhhh
Confidence               2345678999999999999999999999863

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=100.00  E-value=1.1e-38  Score=328.80  Aligned_cols=258  Identities=26%  Similarity=0.416  Sum_probs=208.2

Q ss_pred             CcCcceeeeeeCcEEEEEEEeCCCC-----cEEEEEEeccCc-hhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEE
Q 048419          331 GFGEQNLVGSGGFGRVYRGLMPSLG-----LEVAIKRIGHNS-QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLL  404 (653)
Q Consensus       331 ~f~~~~~LG~G~fg~Vy~~~~~~~~-----~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  404 (653)
                      +|+..+.||+|+||.||+|.....+     ..||+|.+.... ......+.+|++.+++++||||+++++++...+..++
T Consensus         6 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~   85 (283)
T cd05048           6 AVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTCM   85 (283)
T ss_pred             HcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceEE
Confidence            5677889999999999999876544     679999986543 3445678999999999999999999999999889999


Q ss_pred             EEeccCCCCchhhhhcccccc-----------cccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCc
Q 048419          405 VYDYVPNGSLDKLLFDKDHKL-----------RKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLN  473 (653)
Q Consensus       405 V~E~~~~gsL~~~l~~~~~~~-----------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~  473 (653)
                      +|||+++++|.+++.......           ...+++.+++.++.|++.||.|||+   ++++|+||||+||++++++.
T Consensus        86 ~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~---~~i~H~dlkp~Nil~~~~~~  162 (283)
T cd05048          86 LFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSS---HHFVHRDLAARNCLVGEGLT  162 (283)
T ss_pred             EEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccccccceEEEcCCCc
Confidence            999999999999997643211           1458889999999999999999999   89999999999999999999


Q ss_pred             EEEEeecCcccccCCCC-CcccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHH
Q 048419          474 AKLGDFGLAKIYEHGAN-PQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWV  551 (653)
Q Consensus       474 ~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~  551 (653)
                      +||+|||+++....... .......+++.|+|||.+.+..++.++|||||||++|||++ |..||......+   +...+
T Consensus       163 ~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~---~~~~i  239 (283)
T cd05048         163 VKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQE---VIEMI  239 (283)
T ss_pred             EEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHH---HHHHH
Confidence            99999999986533221 22233456788999999988899999999999999999998 999987644321   11111


Q ss_pred             HhhhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          552 KELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       552 ~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                      ..    +.        ........+..+.+|+.+||+.||.+||++.||+++|+.
T Consensus       240 ~~----~~--------~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~  282 (283)
T cd05048         240 RS----RQ--------LLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS  282 (283)
T ss_pred             Hc----CC--------cCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence            11    11        111122345779999999999999999999999999964

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=100.00  E-value=2.1e-38  Score=334.61  Aligned_cols=264  Identities=25%  Similarity=0.360  Sum_probs=209.4

Q ss_pred             hcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC-chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEe
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN-SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYD  407 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E  407 (653)
                      .++|+..+.||+|+||.||++.+..++..+|+|.+... .....+.+.+|++++++++|+||+++++++...+..++|||
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   83 (331)
T cd06649           4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME   83 (331)
T ss_pred             cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEee
Confidence            36788999999999999999999999999999998754 33445679999999999999999999999999999999999


Q ss_pred             ccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccC
Q 048419          408 YVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEH  487 (653)
Q Consensus       408 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~  487 (653)
                      |+++++|.+++...     ..+++..+..++.|++.||.|||+.  .+|+||||||+|||++.++.+||+|||++.....
T Consensus        84 ~~~~~~L~~~l~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~--~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~  156 (331)
T cd06649          84 HMDGGSLDQVLKEA-----KRIPEEILGKVSIAVLRGLAYLREK--HQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID  156 (331)
T ss_pred             cCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHhhc--CCEEcCCCChhhEEEcCCCcEEEccCcccccccc
Confidence            99999999998653     3478899999999999999999982  3699999999999999999999999999876533


Q ss_pred             CCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhccc---------
Q 048419          488 GANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEG---------  558 (653)
Q Consensus       488 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~---------  558 (653)
                      .   ......|+..|+|||++.+..++.++|||||||++|||++|+.||......+   +...+......+         
T Consensus       157 ~---~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~  230 (331)
T cd06649         157 S---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKE---LEAIFGRPVVDGEEGEPHSIS  230 (331)
T ss_pred             c---ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHhcccccccccCCccccC
Confidence            2   2233468999999999998899999999999999999999999997544321   111111100000         


Q ss_pred             ---------------------chhHhhhhcc-----CcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          559 ---------------------EITQAIDQTL-----DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       559 ---------------------~~~~~~d~~l-----~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                                           ...+..+...     ..........+.+++.+||+.||++|||+.|++++..
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~  303 (331)
T cd06649         231 PRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTF  303 (331)
T ss_pred             cccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcChH
Confidence                                 0000111000     0001123467899999999999999999999998764

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=100.00  E-value=1.9e-38  Score=339.83  Aligned_cols=256  Identities=22%  Similarity=0.272  Sum_probs=205.1

Q ss_pred             hhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC---chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEE
Q 048419          328 VTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN---SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLL  404 (653)
Q Consensus       328 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  404 (653)
                      ..++|+..+.||+|+||.||++....++..||+|++...   .....+.+.+|+.+++.++||||+++++++.+.+.+++
T Consensus        41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~l  120 (370)
T cd05596          41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYM  120 (370)
T ss_pred             CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEE
Confidence            346788899999999999999999989999999998643   22334567889999999999999999999999999999


Q ss_pred             EEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccc
Q 048419          405 VYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKI  484 (653)
Q Consensus       405 V~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~  484 (653)
                      ||||+++|+|.+++...      .+++..+..++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||++..
T Consensus       121 v~Ey~~gg~L~~~l~~~------~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~  191 (370)
T cd05596         121 VMEYMPGGDLVNLMSNY------DIPEKWARFYTAEVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTCMK  191 (370)
T ss_pred             EEcCCCCCcHHHHHHhc------CCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEEcCCCCEEEEeccceee
Confidence            99999999999998643      36778888899999999999999   8999999999999999999999999999986


Q ss_pred             ccCCCCCcccccccCCcccCccccccC----CCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccch
Q 048419          485 YEHGANPQTTHIVGTLGYLAPELTRTG----KATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEI  560 (653)
Q Consensus       485 ~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~  560 (653)
                      .............||+.|+|||.+.+.    .++.++|||||||++|||++|+.||........  .. .+..    .. 
T Consensus       192 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~--~~-~i~~----~~-  263 (370)
T cd05596         192 MDANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGT--YS-KIMD----HK-  263 (370)
T ss_pred             ccCCCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHH--HH-HHHc----CC-
Confidence            543322222345799999999988653    478899999999999999999999986543211  11 1100    00 


Q ss_pred             hHhhhhccC-cCCHHHHHHHHHHHHHcCCCCCCC--CCCHHHHHHHHc
Q 048419          561 TQAIDQTLD-YYDLAEAELVLNLGLFCSAPNPVY--RPDMRRVVEFLL  605 (653)
Q Consensus       561 ~~~~d~~l~-~~~~~~~~~l~~l~~~Cl~~dP~~--RPs~~evl~~L~  605 (653)
                           ..+. .........+.+++.+||+.+|.+  ||++.|++++-.
T Consensus       264 -----~~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~~  306 (370)
T cd05596         264 -----NSLTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSHPF  306 (370)
T ss_pred             -----CcCCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcCcc
Confidence                 0000 001123467889999999999988  999999998753

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1e-38  Score=334.11  Aligned_cols=241  Identities=24%  Similarity=0.297  Sum_probs=197.0

Q ss_pred             eeeeCcEEEEEEEeCCCCcEEEEEEeccC---chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEeccCCCCc
Q 048419          338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHN---SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSL  414 (653)
Q Consensus       338 LG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL  414 (653)
                      ||+|+||.||+|....+++.||+|++...   .......+..|+.++++++||||+++++++...+..++||||+++|+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L   80 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL   80 (312)
T ss_pred             CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence            79999999999999988999999998643   334456788999999999999999999999999999999999999999


Q ss_pred             hhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCCCCccc
Q 048419          415 DKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTT  494 (653)
Q Consensus       415 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~  494 (653)
                      .+++...     ..+++..+..++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+++...... ....
T Consensus        81 ~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~---~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~-~~~~  151 (312)
T cd05585          81 FHHLQRE-----GRFDLSRARFYTAELLCALENLHK---FNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDD-DKTN  151 (312)
T ss_pred             HHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCeEeCCCCHHHeEECCCCcEEEEECcccccCccCC-Cccc
Confidence            9998654     248899999999999999999999   999999999999999999999999999998543222 2233


Q ss_pred             ccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhccCcCCHH
Q 048419          495 HIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYYDLA  574 (653)
Q Consensus       495 ~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~  574 (653)
                      ...||+.|+|||.+.+..++.++|||||||++|||++|+.||.......      ...... .+.        + ..+..
T Consensus       152 ~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~------~~~~~~-~~~--------~-~~~~~  215 (312)
T cd05585         152 TFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNE------MYRKIL-QEP--------L-RFPDG  215 (312)
T ss_pred             cccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHH------HHHHHH-cCC--------C-CCCCc
Confidence            4578999999999999899999999999999999999999997543221      111110 000        0 11112


Q ss_pred             HHHHHHHHHHHcCCCCCCCCCC---HHHHHHH
Q 048419          575 EAELVLNLGLFCSAPNPVYRPD---MRRVVEF  603 (653)
Q Consensus       575 ~~~~l~~l~~~Cl~~dP~~RPs---~~evl~~  603 (653)
                      ....+.+++.+||+.||.+||+   +.|++.+
T Consensus       216 ~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~h  247 (312)
T cd05585         216 FDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNH  247 (312)
T ss_pred             CCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcC
Confidence            3456789999999999999985   5666654

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.7e-38  Score=337.97  Aligned_cols=255  Identities=23%  Similarity=0.325  Sum_probs=207.8

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC---chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN---SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVY  406 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  406 (653)
                      ++|...+.||+|+||.||+|....+++.||||++...   .......+.+|++++..++|+||+++++++.+.+..++||
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (350)
T cd05573           1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM   80 (350)
T ss_pred             CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence            4688899999999999999999988999999998653   2244567889999999999999999999999999999999


Q ss_pred             eccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccccc
Q 048419          407 DYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE  486 (653)
Q Consensus       407 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~  486 (653)
                      ||+++++|.+++...     ..+++..++.++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||++....
T Consensus        81 e~~~~~~L~~~l~~~-----~~l~~~~~~~i~~qi~~aL~~LH~---~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~  152 (350)
T cd05573          81 EYMPGGDLMNLLIRK-----DVFPEETARFYIAELVLALDSVHK---LGFIHRDIKPDNILIDADGHIKLADFGLCKKMN  152 (350)
T ss_pred             cCCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEeecCCCCccCc
Confidence            999999999999764     348899999999999999999999   999999999999999999999999999998654


Q ss_pred             CCC----------------------------CCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCCh
Q 048419          487 HGA----------------------------NPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEP  538 (653)
Q Consensus       487 ~~~----------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~  538 (653)
                      ...                            ........||+.|+|||.+.+..++.++|||||||++|||++|+.||..
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~  232 (350)
T cd05573         153 KAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYS  232 (350)
T ss_pred             ccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCC
Confidence            332                            1122345689999999999999999999999999999999999999986


Q ss_pred             hhhhhHHHHHHHHHhhhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCC-HHHHHHHHc
Q 048419          539 QKAAAELLLVDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPD-MRRVVEFLL  605 (653)
Q Consensus       539 ~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs-~~evl~~L~  605 (653)
                      ........   .+...  ....      .+. ........+.+++..|++ +|.+||+ +.+++++..
T Consensus       233 ~~~~~~~~---~i~~~--~~~~------~~p-~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp~  287 (350)
T cd05573         233 DTLQETYN---KIINW--KESL------RFP-PDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSHPF  287 (350)
T ss_pred             CCHHHHHH---HHhcc--CCcc------cCC-CCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcCCC
Confidence            54321110   00000  0000      000 000134678899999997 9999999 999998753

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=100.00  E-value=1.5e-38  Score=336.55  Aligned_cols=248  Identities=26%  Similarity=0.327  Sum_probs=203.5

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCC-cEEEEEEeccC---chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLG-LEVAIKRIGHN---SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLV  405 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~-~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV  405 (653)
                      ++|...+.||+|+||.||+|.+...+ ..||+|++...   .....+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus        30 ~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv  109 (340)
T PTZ00426         30 EDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYLV  109 (340)
T ss_pred             hhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEEE
Confidence            46888999999999999999876544 68999998643   233456788999999999999999999999999999999


Q ss_pred             EeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccc
Q 048419          406 YDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIY  485 (653)
Q Consensus       406 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~  485 (653)
                      |||+++|+|.+++...     ..+++..+..++.|++.||.|||+   ++|+||||||+|||++.++.+||+|||+++..
T Consensus       110 ~Ey~~~g~L~~~i~~~-----~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~  181 (340)
T PTZ00426        110 LEFVIGGEFFTFLRRN-----KRFPNDVGCFYAAQIVLIFEYLQS---LNIVYRDLKPENLLLDKDGFIKMTDFGFAKVV  181 (340)
T ss_pred             EeCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeEccCCCHHHEEECCCCCEEEecCCCCeec
Confidence            9999999999999754     348899999999999999999999   99999999999999999999999999999865


Q ss_pred             cCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhh
Q 048419          486 EHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAID  565 (653)
Q Consensus       486 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d  565 (653)
                      ...    .....||+.|+|||++.+..++.++|||||||++|||++|+.||.......   ....+.    .+..     
T Consensus       182 ~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~---~~~~i~----~~~~-----  245 (340)
T PTZ00426        182 DTR----TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLL---IYQKIL----EGII-----  245 (340)
T ss_pred             CCC----cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHH---HHHHHh----cCCC-----
Confidence            432    234578999999999998889999999999999999999999998654321   111111    1100     


Q ss_pred             hccCcCCHHHHHHHHHHHHHcCCCCCCCCC-----CHHHHHHHHc
Q 048419          566 QTLDYYDLAEAELVLNLGLFCSAPNPVYRP-----DMRRVVEFLL  605 (653)
Q Consensus       566 ~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~L~  605 (653)
                          .++......+.+++.+|++.||.+|+     ++++++++-.
T Consensus       246 ----~~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp~  286 (340)
T PTZ00426        246 ----YFPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPW  286 (340)
T ss_pred             ----CCCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCCC
Confidence                01111234578999999999999995     8999988743

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=100.00  E-value=1.2e-38  Score=329.81  Aligned_cols=265  Identities=22%  Similarity=0.288  Sum_probs=203.3

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc-hhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEec
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS-QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDY  408 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~  408 (653)
                      ++|...+.||+|+||.||+|....++..||+|++.... ......+.+|+.++++++||||+++++++...+..++||||
T Consensus         5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   84 (288)
T cd07871           5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEY   84 (288)
T ss_pred             ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeC
Confidence            46888999999999999999999889999999986543 22345678999999999999999999999999999999999


Q ss_pred             cCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCC
Q 048419          409 VPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHG  488 (653)
Q Consensus       409 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~  488 (653)
                      +++ +|.+++....    ..+++..+..++.||+.||+|||+   ++|+||||||+|||++.++.+||+|||+++.....
T Consensus        85 ~~~-~l~~~l~~~~----~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~  156 (288)
T cd07871          85 LDS-DLKQYLDNCG----NLMSMHNVKIFMFQLLRGLSYCHK---RKILHRDLKPQNLLINEKGELKLADFGLARAKSVP  156 (288)
T ss_pred             CCc-CHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEEECcCcceeeccCC
Confidence            975 8988886542    347888999999999999999999   99999999999999999999999999999764332


Q ss_pred             CCCcccccccCCcccCcccccc-CCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchh------
Q 048419          489 ANPQTTHIVGTLGYLAPELTRT-GKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEIT------  561 (653)
Q Consensus       489 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~------  561 (653)
                      . .......+++.|+|||.+.+ ..++.++||||+||++|||++|+.||......+..................      
T Consensus       157 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (288)
T cd07871         157 T-KTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNE  235 (288)
T ss_pred             C-ccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccch
Confidence            2 12233467899999998865 568899999999999999999999997655433222111110000000000      


Q ss_pred             ---HhhhhccCcCC-----HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 048419          562 ---QAIDQTLDYYD-----LAEAELVLNLGLFCSAPNPVYRPDMRRVVEF  603 (653)
Q Consensus       562 ---~~~d~~l~~~~-----~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  603 (653)
                         ....+......     ......+.+++.+||+.||.+|||+.|++++
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~h  285 (288)
T cd07871         236 EFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRH  285 (288)
T ss_pred             hhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence               00000000000     0123567899999999999999999999865

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.1e-38  Score=339.10  Aligned_cols=254  Identities=21%  Similarity=0.295  Sum_probs=203.0

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC---chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN---SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVY  406 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  406 (653)
                      ++|+..+.||+|+||.||+|....+++.||||++...   .......+.+|+.+++.++|+||+++++++.+.+..++||
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~   80 (364)
T cd05599           1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM   80 (364)
T ss_pred             CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence            4688899999999999999999988999999999653   2334566788999999999999999999999999999999


Q ss_pred             eccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccccc
Q 048419          407 DYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE  486 (653)
Q Consensus       407 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~  486 (653)
                      ||+++|+|.+++...     ..+++.++..++.||+.||+|||+   ++|+||||||+|||++.++.+||+|||++..+.
T Consensus        81 E~~~~g~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~  152 (364)
T cd05599          81 EYLPGGDMMTLLMKK-----DTFTEEETRFYIAETILAIDSIHK---LGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLK  152 (364)
T ss_pred             CCCCCcHHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeEECCCCCEEEeecccceecc
Confidence            999999999998754     348999999999999999999999   899999999999999999999999999987543


Q ss_pred             CCCCC-------------------------------------cccccccCCcccCccccccCCCCCccceeehHHHHHHH
Q 048419          487 HGANP-------------------------------------QTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEV  529 (653)
Q Consensus       487 ~~~~~-------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~el  529 (653)
                      .....                                     ......||+.|+|||++....++.++|||||||++|||
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el  232 (364)
T cd05599         153 KSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEM  232 (364)
T ss_pred             ccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHh
Confidence            21100                                     00123689999999999988999999999999999999


Q ss_pred             HhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCC---HHHHHHHH
Q 048419          530 ACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPD---MRRVVEFL  604 (653)
Q Consensus       530 ltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs---~~evl~~L  604 (653)
                      ++|+.||.........   ..+...  ...+.      . .......+.+.+++.+|+. +|.+|++   +.|++++-
T Consensus       233 ~~G~~Pf~~~~~~~~~---~~i~~~--~~~~~------~-~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h~  297 (364)
T cd05599         233 LVGYPPFCSDNPQETY---RKIINW--KETLQ------F-PDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSHP  297 (364)
T ss_pred             hcCCCCCCCCCHHHHH---HHHHcC--CCccC------C-CCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcCC
Confidence            9999999865432211   111000  00000      0 0001123567788888986 9999998   99998864

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=100.00  E-value=9.2e-39  Score=342.67  Aligned_cols=260  Identities=24%  Similarity=0.348  Sum_probs=203.5

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCC-----CCcEEEEEEeccC-chhhHHHHHHHHHHHhhc-CCCceeeeeeeeccccee
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPS-----LGLEVAIKRIGHN-SQQGMKEFVAEIMSMGRL-RHRNLVQLHGWCRKQDEL  402 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~-----~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~  402 (653)
                      ++|...+.||+|+||.||+|+...     ++..||||++... .....+.+.+|+.+++.+ +|+||++++++|...+..
T Consensus        38 ~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~~  117 (374)
T cd05106          38 DNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGPV  117 (374)
T ss_pred             HHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCCe
Confidence            468889999999999999998543     3357999999654 333456788999999999 899999999999999999


Q ss_pred             EEEEeccCCCCchhhhhcccc-----------------------------------------------------------
Q 048419          403 LLVYDYVPNGSLDKLLFDKDH-----------------------------------------------------------  423 (653)
Q Consensus       403 ~lV~E~~~~gsL~~~l~~~~~-----------------------------------------------------------  423 (653)
                      ++||||+++|+|.+++.....                                                           
T Consensus       118 ~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (374)
T cd05106         118 LVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSDS  197 (374)
T ss_pred             EEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccccccc
Confidence            999999999999999864321                                                           


Q ss_pred             ------cccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCCCC-ccccc
Q 048419          424 ------KLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANP-QTTHI  496 (653)
Q Consensus       424 ------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~-~~~~~  496 (653)
                            .....+++.++++++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+++........ .....
T Consensus       198 ~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~---~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~~  274 (374)
T cd05106         198 KDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLAS---KNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNA  274 (374)
T ss_pred             cchhccCCCCCcCHHHHHHHHHHHHHHHHHHHH---CCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccCC
Confidence                  001347888999999999999999999   99999999999999999999999999999865432211 11122


Q ss_pred             ccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhccCcCCHHH
Q 048419          497 VGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYYDLAE  575 (653)
Q Consensus       497 ~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~  575 (653)
                      .++..|+|||++.+..++.++|||||||++|||++ |+.||........  ....+....         ...   .....
T Consensus       275 ~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~--~~~~~~~~~---------~~~---~~~~~  340 (374)
T cd05106         275 RLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSK--FYKMVKRGY---------QMS---RPDFA  340 (374)
T ss_pred             CCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHH--HHHHHHccc---------Ccc---CCCCC
Confidence            35668999999988899999999999999999997 9999875432211  111111000         000   00112


Q ss_pred             HHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          576 AELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       576 ~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                      ...+.+++.+||+.||.+||++.+|++.|+.
T Consensus       341 ~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~  371 (374)
T cd05106         341 PPEIYSIMKMCWNLEPTERPTFSQISQLIQR  371 (374)
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence            4678899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=100.00  E-value=1.4e-38  Score=335.42  Aligned_cols=244  Identities=25%  Similarity=0.325  Sum_probs=200.5

Q ss_pred             eeeeeeCcEEEEEEEeCCCCcEEEEEEeccC---chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEeccCCC
Q 048419          336 NLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN---SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNG  412 (653)
Q Consensus       336 ~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~g  412 (653)
                      +.||+|+||.||++....+++.||||++...   .......+.+|+.++++++||||+++++++...+..++||||+++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g   80 (328)
T cd05593           1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG   80 (328)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence            4699999999999999989999999999653   2344567889999999999999999999999999999999999999


Q ss_pred             CchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCCCCc
Q 048419          413 SLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQ  492 (653)
Q Consensus       413 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~  492 (653)
                      +|..++...     ..+++.++..++.||+.||+|||+   ++|+||||||+|||++.++.+||+|||+++...... ..
T Consensus        81 ~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~-~~  151 (328)
T cd05593          81 ELFFHLSRE-----RVFSEDRTRFYGAEIVSALDYLHS---GKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDA-AT  151 (328)
T ss_pred             CHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCeEecccCHHHeEECCCCcEEEecCcCCccCCCcc-cc
Confidence            999888653     348899999999999999999999   899999999999999999999999999987532211 22


Q ss_pred             ccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhccCcCC
Q 048419          493 TTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYYD  572 (653)
Q Consensus       493 ~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~  572 (653)
                      .....||+.|+|||.+.+..++.++|||||||++|||++|+.||........   ...+.    ....         ..+
T Consensus       152 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~---~~~~~----~~~~---------~~p  215 (328)
T cd05593         152 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKL---FELIL----MEDI---------KFP  215 (328)
T ss_pred             cccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHH---HHHhc----cCCc---------cCC
Confidence            2345789999999999988999999999999999999999999975443211   11100    0000         011


Q ss_pred             HHHHHHHHHHHHHcCCCCCCCCC-----CHHHHHHHH
Q 048419          573 LAEAELVLNLGLFCSAPNPVYRP-----DMRRVVEFL  604 (653)
Q Consensus       573 ~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~L  604 (653)
                      ......+.+++.+||+.||.+||     ++.|++++.
T Consensus       216 ~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~  252 (328)
T cd05593         216 RTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHS  252 (328)
T ss_pred             CCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcCC
Confidence            12245678999999999999997     899998764

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=7.9e-39  Score=337.64  Aligned_cols=254  Identities=26%  Similarity=0.338  Sum_probs=211.0

Q ss_pred             cCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC---chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEec
Q 048419          332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN---SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDY  408 (653)
Q Consensus       332 f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~  408 (653)
                      |...+.||.|+-|.|-.|++..+|+.+|||++.+.   .......+.+|+-+|+-|+|||++++++.+++..++|+|.||
T Consensus        14 wkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvlEy   93 (786)
T KOG0588|consen   14 WKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVLEY   93 (786)
T ss_pred             eeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEEEe
Confidence            34467899999999999999999999999999654   222345677899999999999999999999999999999999


Q ss_pred             cCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCC
Q 048419          409 VPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHG  488 (653)
Q Consensus       409 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~  488 (653)
                      +++|-|.++|-.++     +|++.+..+++.||+.|+.|+|.   .+|+||||||+|+|||..+++||+|||+|.+...+
T Consensus        94 v~gGELFdylv~kG-----~l~e~eaa~ff~QIi~gv~yCH~---~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~g  165 (786)
T KOG0588|consen   94 VPGGELFDYLVRKG-----PLPEREAAHFFRQILDGVSYCHA---FNICHRDLKPENLLLDVKNNIKIADFGMASLEVPG  165 (786)
T ss_pred             cCCchhHHHHHhhC-----CCCCHHHHHHHHHHHHHHHHHhh---hcceeccCCchhhhhhcccCEeeeccceeecccCC
Confidence            99999999998754     49999999999999999999999   89999999999999999999999999999875543


Q ss_pred             CCCcccccccCCcccCccccccCCCC-CccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhc
Q 048419          489 ANPQTTHIVGTLGYLAPELTRTGKAT-TSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQT  567 (653)
Q Consensus       489 ~~~~~~~~~gt~~y~aPE~~~~~~~~-~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~  567 (653)
                      .  .....+|++.|.|||++.+..|. .++||||.||+||.|+||+.||++....   .+...|..-             
T Consensus       166 k--lLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir---~LLlKV~~G-------------  227 (786)
T KOG0588|consen  166 K--LLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIR---VLLLKVQRG-------------  227 (786)
T ss_pred             c--cccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHH---HHHHHHHcC-------------
Confidence            3  34556999999999999998875 5999999999999999999999853321   122222211             


Q ss_pred             cCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH--cCCCCCC
Q 048419          568 LDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL--LGDSSLP  611 (653)
Q Consensus       568 l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L--~~~~~~p  611 (653)
                      .-+.+.....++.+|+.+|+..||+.|.|++||+++.  .+...+|
T Consensus       228 ~f~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l~g~~~~~  273 (786)
T KOG0588|consen  228 VFEMPSNISSEAQDLLRRMLDVDPSTRITTEEILKHPFLSGYTSLP  273 (786)
T ss_pred             cccCCCcCCHHHHHHHHHHhccCccccccHHHHhhCchhhcCCCCC
Confidence            0011222346788999999999999999999999975  4444333

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=100.00  E-value=1.1e-38  Score=335.51  Aligned_cols=244  Identities=26%  Similarity=0.330  Sum_probs=199.7

Q ss_pred             eeeeeeCcEEEEEEEeCCCCcEEEEEEeccC---chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEeccCCC
Q 048419          336 NLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN---SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNG  412 (653)
Q Consensus       336 ~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~g  412 (653)
                      +.||+|+||.||++....+|..||+|++...   .......+..|+.++++++||||+++++++...+..++||||+++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~   80 (323)
T cd05595           1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG   80 (323)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence            4699999999999999988999999999653   2334567788999999999999999999999999999999999999


Q ss_pred             CchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCCCCc
Q 048419          413 SLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQ  492 (653)
Q Consensus       413 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~  492 (653)
                      +|..++...     ..+++..++.++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+++...... ..
T Consensus        81 ~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~-~~  151 (323)
T cd05595          81 ELFFHLSRE-----RVFTEERARFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG-AT  151 (323)
T ss_pred             cHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHEEEcCCCCEEecccHHhccccCCC-Cc
Confidence            999888653     348899999999999999999999   899999999999999999999999999987532211 12


Q ss_pred             ccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhccCcCC
Q 048419          493 TTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYYD  572 (653)
Q Consensus       493 ~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~  572 (653)
                      .....||+.|+|||++.+..++.++|||||||++|||++|+.||........   ...+.    ...        . ..+
T Consensus       152 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~---~~~~~----~~~--------~-~~p  215 (323)
T cd05595         152 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERL---FELIL----MEE--------I-RFP  215 (323)
T ss_pred             cccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHH---HHHHh----cCC--------C-CCC
Confidence            2335689999999999988999999999999999999999999976543211   11000    000        0 011


Q ss_pred             HHHHHHHHHHHHHcCCCCCCCCC-----CHHHHHHHH
Q 048419          573 LAEAELVLNLGLFCSAPNPVYRP-----DMRRVVEFL  604 (653)
Q Consensus       573 ~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~L  604 (653)
                      ......+.+++.+||+.||.+||     ++.+++++-
T Consensus       216 ~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h~  252 (323)
T cd05595         216 RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHR  252 (323)
T ss_pred             CCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcCC
Confidence            12245678999999999999998     899988754

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=100.00  E-value=9.2e-39  Score=337.24  Aligned_cols=255  Identities=25%  Similarity=0.275  Sum_probs=205.5

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC---chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN---SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVY  406 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  406 (653)
                      ++|...+.||+|+||.||++....+++.||+|++...   ..+..+.+.+|+.+++.++|+||+++++++.+.+..++||
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (330)
T cd05601           1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM   80 (330)
T ss_pred             CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence            4688899999999999999999989999999999653   2234567889999999999999999999999999999999


Q ss_pred             eccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccccc
Q 048419          407 DYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE  486 (653)
Q Consensus       407 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~  486 (653)
                      ||+++|+|.+++....    ..+++..+..++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||++....
T Consensus        81 e~~~~~~L~~~l~~~~----~~l~~~~~~~~~~qi~~aL~~lH~---~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~  153 (330)
T cd05601          81 EYQPGGDLLSLLNRYE----DQFDEDMAQFYLAELVLAIHSVHQ---MGYVHRDIKPENVLIDRTGHIKLADFGSAARLT  153 (330)
T ss_pred             CCCCCCCHHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHH---CCeEcccCchHheEECCCCCEEeccCCCCeECC
Confidence            9999999999997652    358899999999999999999999   999999999999999999999999999998765


Q ss_pred             CCCCCcccccccCCcccCccccc------cCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccch
Q 048419          487 HGANPQTTHIVGTLGYLAPELTR------TGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEI  560 (653)
Q Consensus       487 ~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~  560 (653)
                      ...........||+.|+|||++.      ...++.++|||||||++|||++|+.||........  +.    ........
T Consensus       154 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~--~~----~i~~~~~~  227 (330)
T cd05601         154 ANKMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKT--YN----NIMNFQRF  227 (330)
T ss_pred             CCCceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHH--HH----HHHcCCCc
Confidence            43332333457899999999986      45678899999999999999999999976543211  10    00000000


Q ss_pred             hHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          561 TQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       561 ~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                      ...      .........+.+|+..|++ +|.+||++.+++++-
T Consensus       228 ~~~------~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h~  264 (330)
T cd05601         228 LKF------PEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCHP  264 (330)
T ss_pred             cCC------CCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCCC
Confidence            000      0011234567889999998 999999999999764

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>PHA03212 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=2.1e-38  Score=341.28  Aligned_cols=264  Identities=20%  Similarity=0.198  Sum_probs=203.1

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEecc
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYV  409 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~  409 (653)
                      ++|...+.||+|+||.||++.+..+++.||+|...      .+.+.+|++++++|+||||+++++++......++|+|++
T Consensus        92 ~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~  165 (391)
T PHA03212         92 AGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ------RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRY  165 (391)
T ss_pred             CCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh------hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEecC
Confidence            56899999999999999999999999999999753      235678999999999999999999999999999999999


Q ss_pred             CCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCC
Q 048419          410 PNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGA  489 (653)
Q Consensus       410 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~  489 (653)
                      . ++|..++...     ..+++.+++.++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+++......
T Consensus       166 ~-~~L~~~l~~~-----~~l~~~~~~~i~~qi~~aL~ylH~---~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~  236 (391)
T PHA03212        166 K-TDLYCYLAAK-----RNIAICDILAIERSVLRAIQYLHE---NRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDIN  236 (391)
T ss_pred             C-CCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChHhEEEcCCCCEEEEeCCccccccccc
Confidence            5 6888887653     348899999999999999999999   899999999999999999999999999997543322


Q ss_pred             CCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhh-----hHHHHHHHHHhhhc--------
Q 048419          490 NPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAA-----AELLLVDWVKELHL--------  556 (653)
Q Consensus       490 ~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~-----~~~~l~~~~~~~~~--------  556 (653)
                      ........||+.|+|||++.+..++.++|||||||++|||++|+.|+......     ....+...+.....        
T Consensus       237 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~  316 (391)
T PHA03212        237 ANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPID  316 (391)
T ss_pred             ccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcc
Confidence            22233457999999999999889999999999999999999999886533210     01111111111000        


Q ss_pred             -ccchhHhh---hhcc----CcC-----CHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcCCC
Q 048419          557 -EGEITQAI---DQTL----DYY-----DLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLGDS  608 (653)
Q Consensus       557 -~~~~~~~~---d~~l----~~~-----~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  608 (653)
                       ...+.+..   ....    ...     .......+.+|+.+||+.||.+|||+.|++++-....
T Consensus       317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~~  381 (391)
T PHA03212        317 AQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQD  381 (391)
T ss_pred             hhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChhhcc
Confidence             00001100   0000    000     0123457889999999999999999999998766544

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=100.00  E-value=2e-38  Score=322.01  Aligned_cols=252  Identities=25%  Similarity=0.389  Sum_probs=202.9

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEecc
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYV  409 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~  409 (653)
                      ++|+..+.||+|+||.||++.... +..+|+|.+.... ...+.+.+|+.++++++||||++++++|...+..++||||+
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~-~~~~a~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~   81 (256)
T cd05114           4 SELTFMKELGSGQFGVVHLGKWRA-QIKVAIKAINEGA-MSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFM   81 (256)
T ss_pred             HHcEEeeEecCCcCceEEEEEecc-CceEEEEecccCC-ccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcC
Confidence            357778899999999999998864 5689999886432 23467889999999999999999999999999999999999


Q ss_pred             CCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCC
Q 048419          410 PNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGA  489 (653)
Q Consensus       410 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~  489 (653)
                      ++|+|.+++....    ..+++..++.++.|++.||.|||+   ++++|+||||+||+++.++.+||+|||+++......
T Consensus        82 ~~~~L~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~  154 (256)
T cd05114          82 ENGCLLNYLRQRQ----GKLSKDMLLSMCQDVCEGMEYLER---NSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDE  154 (256)
T ss_pred             CCCcHHHHHHhCc----cCCCHHHHHHHHHHHHHHHHHHHH---CCccccccCcceEEEcCCCeEEECCCCCccccCCCc
Confidence            9999999987543    248899999999999999999999   899999999999999999999999999998654322


Q ss_pred             CCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhcc
Q 048419          490 NPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTL  568 (653)
Q Consensus       490 ~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l  568 (653)
                      ........++..|+|||.+.+..++.++||||||+++|||++ |+.||.......   ....+....   ..   ..   
T Consensus       155 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~---~~~~i~~~~---~~---~~---  222 (256)
T cd05114         155 YTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYE---VVEMISRGF---RL---YR---  222 (256)
T ss_pred             eeccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHH---HHHHHHCCC---CC---CC---
Confidence            222222345668999999988889999999999999999999 889987654321   111221110   00   00   


Q ss_pred             CcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          569 DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       569 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                         +......+.+++.+||+.+|.+||++.++++.|.
T Consensus       223 ---~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l~  256 (256)
T cd05114         223 ---PKLASMTVYEVMYSCWHEKPEGRPTFAELLRAIT  256 (256)
T ss_pred             ---CCCCCHHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence               1112356899999999999999999999999873

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=100.00  E-value=2.1e-38  Score=350.51  Aligned_cols=253  Identities=23%  Similarity=0.291  Sum_probs=206.4

Q ss_pred             CcCcceeeeeeCcEEEEEEEeCCC-CcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEecc
Q 048419          331 GFGEQNLVGSGGFGRVYRGLMPSL-GLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYV  409 (653)
Q Consensus       331 ~f~~~~~LG~G~fg~Vy~~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~  409 (653)
                      .|...+.||+|+||.||+|....+ +..||+|.+..........+..|+.+++.++||||++++++|...+..+|||||+
T Consensus        68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~  147 (478)
T PTZ00267         68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYG  147 (478)
T ss_pred             eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECC
Confidence            388899999999999999998776 7889999876655555667888999999999999999999999999999999999


Q ss_pred             CCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCC
Q 048419          410 PNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGA  489 (653)
Q Consensus       410 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~  489 (653)
                      ++|+|.++|...... ...+++.++..++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+++......
T Consensus       148 ~gg~L~~~l~~~~~~-~~~l~~~~~~~i~~qi~~aL~~lH~---~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~  223 (478)
T PTZ00267        148 SGGDLNKQIKQRLKE-HLPFQEYEVGLLFYQIVLALDEVHS---RKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSV  223 (478)
T ss_pred             CCCCHHHHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHh---CCEEECCcCHHhEEECCCCcEEEEeCcCceecCCcc
Confidence            999999988653211 3458888999999999999999999   899999999999999999999999999998764332


Q ss_pred             C-CcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhcc
Q 048419          490 N-PQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTL  568 (653)
Q Consensus       490 ~-~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l  568 (653)
                      . .......||+.|+|||++.+..++.++|||||||++|||++|+.||.......   +...+.    .+..        
T Consensus       224 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~---~~~~~~----~~~~--------  288 (478)
T PTZ00267        224 SLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQRE---IMQQVL----YGKY--------  288 (478)
T ss_pred             ccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHH----hCCC--------
Confidence            2 12234569999999999998899999999999999999999999997543321   111110    0110        


Q ss_pred             CcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 048419          569 DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVE  602 (653)
Q Consensus       569 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~  602 (653)
                      ...+......+.+++.+||+.+|++||++.++++
T Consensus       289 ~~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~  322 (478)
T PTZ00267        289 DPFPCPVSSGMKALLDPLLSKNPALRPTTQQLLH  322 (478)
T ss_pred             CCCCccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence            0111123456889999999999999999999874

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=100.00  E-value=4.7e-38  Score=336.57  Aligned_cols=260  Identities=22%  Similarity=0.265  Sum_probs=205.2

Q ss_pred             HHHHhhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC---chhhHHHHHHHHHHHhhcCCCceeeeeeeecccc
Q 048419          324 ELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN---SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQD  400 (653)
Q Consensus       324 el~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~  400 (653)
                      ++....++|+..+.||+|+||.||++....+++.+|+|.+...   .....+.+.+|+.+++.++||||+++++++.+.+
T Consensus        37 ~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~  116 (370)
T cd05621          37 KLQMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDK  116 (370)
T ss_pred             hcCCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC
Confidence            3344557899999999999999999999988999999998642   2233456889999999999999999999999999


Q ss_pred             eeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeec
Q 048419          401 ELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFG  480 (653)
Q Consensus       401 ~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG  480 (653)
                      .+++||||+++|+|.+++...      .+++.++..++.||+.||+|||+   ++|+||||||+|||+++++.+||+|||
T Consensus       117 ~~~lv~Ey~~gg~L~~~l~~~------~~~~~~~~~~~~qil~aL~~LH~---~~IvHrDLKp~NILl~~~~~~kL~DFG  187 (370)
T cd05621         117 YLYMVMEYMPGGDLVNLMSNY------DVPEKWAKFYTAEVVLALDAIHS---MGLIHRDVKPDNMLLDKHGHLKLADFG  187 (370)
T ss_pred             EEEEEEcCCCCCcHHHHHHhc------CCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHEEECCCCCEEEEecc
Confidence            999999999999999998543      37888899999999999999999   999999999999999999999999999


Q ss_pred             CcccccCCCCCcccccccCCcccCccccccC----CCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhc
Q 048419          481 LAKIYEHGANPQTTHIVGTLGYLAPELTRTG----KATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHL  556 (653)
Q Consensus       481 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~  556 (653)
                      ++...............||+.|+|||++.+.    .++.++||||+||++|||++|+.||........  ....+.    
T Consensus       188 ~a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~--~~~i~~----  261 (370)
T cd05621         188 TCMKMDETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGT--YSKIMD----  261 (370)
T ss_pred             cceecccCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHH--HHHHHh----
Confidence            9987643322222345799999999998654    378899999999999999999999976543211  111100    


Q ss_pred             ccchhHhhhhccC-cCCHHHHHHHHHHHHHcCCCCCCC--CCCHHHHHHHHc
Q 048419          557 EGEITQAIDQTLD-YYDLAEAELVLNLGLFCSAPNPVY--RPDMRRVVEFLL  605 (653)
Q Consensus       557 ~~~~~~~~d~~l~-~~~~~~~~~l~~l~~~Cl~~dP~~--RPs~~evl~~L~  605 (653)
                      ...       .+. .........+.+++..|+..++.+  ||++.|++++-.
T Consensus       262 ~~~-------~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp~  306 (370)
T cd05621         262 HKN-------SLNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPF  306 (370)
T ss_pred             CCc-------ccCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcCcc
Confidence            000       000 001123456778888899755543  899999999754

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=100.00  E-value=4.7e-39  Score=303.22  Aligned_cols=262  Identities=26%  Similarity=0.294  Sum_probs=213.3

Q ss_pred             hcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccc-----eeE
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQD-----ELL  403 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~-----~~~  403 (653)
                      .++|.+.+.||+|||+-||.++.-.++..+|+|++.....++.+..++|++..++++|||++++++++..+.     ..|
T Consensus        20 ~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~y   99 (302)
T KOG2345|consen   20 NKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAY   99 (302)
T ss_pred             CceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEE
Confidence            467999999999999999999988889999999998888888999999999999999999999999985544     489


Q ss_pred             EEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcc
Q 048419          404 LVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK  483 (653)
Q Consensus       404 lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~  483 (653)
                      |+++|...|+|.+.+.....+ +..+++.+.++|+.+|++||++||+.. .++.||||||.|||+.+.+.++|.|||.++
T Consensus       100 ll~Pyy~~Gsl~d~i~~~k~k-g~~~sE~~iL~if~gic~gL~~lH~~~-~~yAH~DiKP~NILls~~~~~vl~D~GS~~  177 (302)
T KOG2345|consen  100 LLLPYYKRGSLLDEIERLKIK-GNFVSEAQILWIFLGICRGLEALHEKE-PPYAHRDIKPANILLSDSGLPVLMDLGSAT  177 (302)
T ss_pred             EEeehhccccHHHHHHHHhhc-CCccCHHHHHHHHHHHHHHHHHHhccC-CcccccCCCcceeEecCCCceEEEeccCcc
Confidence            999999999999999876543 457999999999999999999999932 359999999999999999999999999998


Q ss_pred             cccCCCC--------CcccccccCCcccCcccccc---CCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHH
Q 048419          484 IYEHGAN--------PQTTHIVGTLGYLAPELTRT---GKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVK  552 (653)
Q Consensus       484 ~~~~~~~--------~~~~~~~gt~~y~aPE~~~~---~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~  552 (653)
                      ...-...        +.......|..|+|||.+.-   ...++++|||||||+||+|+.|..||+......         
T Consensus       178 ~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~G---------  248 (302)
T KOG2345|consen  178 QAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQG---------  248 (302)
T ss_pred             ccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcC---------
Confidence            6532211        11123357899999998853   457899999999999999999999998543211         


Q ss_pred             hhhcccchhHhhhh-ccC-cCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          553 ELHLEGEITQAIDQ-TLD-YYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       553 ~~~~~~~~~~~~d~-~l~-~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                           +.+.-++.. .+. .......+.+.+++.+|++.||.+||++.+++..+..
T Consensus       249 -----gSlaLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~  299 (302)
T KOG2345|consen  249 -----GSLALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDD  299 (302)
T ss_pred             -----CeEEEeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHh
Confidence                 111111111 111 0111256789999999999999999999999998754

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=7.5e-38  Score=323.26  Aligned_cols=254  Identities=25%  Similarity=0.367  Sum_probs=205.5

Q ss_pred             CcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc---hhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEe
Q 048419          331 GFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS---QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYD  407 (653)
Q Consensus       331 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E  407 (653)
                      +|+..++||+|+||.||++....+++.||||++....   ......+.+|+.++++++|+||+++++.+...+.+++|||
T Consensus         1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   80 (285)
T cd05605           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT   80 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence            4778899999999999999998889999999986532   2233557789999999999999999999999999999999


Q ss_pred             ccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccC
Q 048419          408 YVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEH  487 (653)
Q Consensus       408 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~  487 (653)
                      |+++|+|.+++....   ...+++.++..++.|++.||.|||+   .+++||||||+||++++++.++|+|||++.....
T Consensus        81 ~~~~~~L~~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~  154 (285)
T cd05605          81 LMNGGDLKFHIYNMG---NPGFDEERAVFYAAEITCGLEDLHR---ERIVYRDLKPENILLDDYGHIRISDLGLAVEIPE  154 (285)
T ss_pred             ccCCCcHHHHHHhcC---cCCCCHHHHHHHHHHHHHHHHHHHH---CCcEecCCCHHHEEECCCCCEEEeeCCCceecCC
Confidence            999999998886543   2458999999999999999999999   8999999999999999999999999999986543


Q ss_pred             CCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhc
Q 048419          488 GANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQT  567 (653)
Q Consensus       488 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~  567 (653)
                      ..  ......|+..|+|||.+.+..++.++||||+||++|||++|+.||.........   +.+         ...+...
T Consensus       155 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~---~~~---------~~~~~~~  220 (285)
T cd05605         155 GE--TIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKR---EEV---------ERRVKED  220 (285)
T ss_pred             CC--ccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHH---HHH---------HHHhhhc
Confidence            22  122346899999999998888999999999999999999999999864332110   000         0111111


Q ss_pred             cCcCCHHHHHHHHHHHHHcCCCCCCCCC-----CHHHHHHHH
Q 048419          568 LDYYDLAEAELVLNLGLFCSAPNPVYRP-----DMRRVVEFL  604 (653)
Q Consensus       568 l~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~L  604 (653)
                      ...+.......+.+|+.+||+.||.+||     ++.+++++-
T Consensus       221 ~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~  262 (285)
T cd05605         221 QEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAHP  262 (285)
T ss_pred             ccccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcCc
Confidence            1112223456788999999999999999     888987753

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=100.00  E-value=7.9e-38  Score=336.68  Aligned_cols=254  Identities=24%  Similarity=0.351  Sum_probs=200.3

Q ss_pred             CcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC---chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEe
Q 048419          331 GFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN---SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYD  407 (653)
Q Consensus       331 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E  407 (653)
                      .|...+.||+|+||+||+|+...+++.||||++...   .....+.+.+|+.++++++|+||+++++++.+.+.+++|||
T Consensus         2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E   81 (381)
T cd05626           2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD   81 (381)
T ss_pred             CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence            577889999999999999999999999999999653   23445678899999999999999999999999999999999


Q ss_pred             ccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccC
Q 048419          408 YVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEH  487 (653)
Q Consensus       408 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~  487 (653)
                      |+++|+|.+++...     ..+++.....++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++....
T Consensus        82 ~~~gg~L~~~l~~~-----~~~~e~~~~~~~~qi~~aL~~LH~---~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~  153 (381)
T cd05626          82 YIPGGDMMSLLIRM-----EVFPEVLARFYIAELTLAIESVHK---MGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRW  153 (381)
T ss_pred             cCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCeeecCCcHHHEEECCCCCEEEeeCcCCccccc
Confidence            99999999998754     347888889999999999999999   9999999999999999999999999999764311


Q ss_pred             CCC----------------------------------------------CcccccccCCcccCccccccCCCCCccceee
Q 048419          488 GAN----------------------------------------------PQTTHIVGTLGYLAPELTRTGKATTSTDVYS  521 (653)
Q Consensus       488 ~~~----------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s  521 (653)
                      ...                                              .......||+.|+|||.+.+..++.++||||
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwS  233 (381)
T cd05626         154 THNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWS  233 (381)
T ss_pred             ccccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceee
Confidence            000                                              0012346999999999999888999999999


Q ss_pred             hHHHHHHHHhCCCCCChhhhhhHHH-HHHHHHhhhcccchhHhhhhccCcCCHHHHHHHHHHHHH--cCCCCCCCCCCHH
Q 048419          522 YGILMLEVACGRRSIEPQKAAAELL-LVDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLF--CSAPNPVYRPDMR  598 (653)
Q Consensus       522 ~Gvvl~elltG~~p~~~~~~~~~~~-l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~--Cl~~dP~~RPs~~  598 (653)
                      |||++|||++|+.||.......... +..|      .... . + +    ........+.+++.+  |+..+|..||++.
T Consensus       234 lG~il~elltG~~Pf~~~~~~~~~~~i~~~------~~~~-~-~-~----~~~~~s~~~~dli~~ll~~~~~~~~R~~~~  300 (381)
T cd05626         234 VGVILFEMLVGQPPFLAPTPTETQLKVINW------ENTL-H-I-P----PQVKLSPEAVDLITKLCCSAEERLGRNGAD  300 (381)
T ss_pred             hhhHHHHHHhCCCCCcCCCHHHHHHHHHcc------cccc-C-C-C----CCCCCCHHHHHHHHHHccCcccccCCCCHH
Confidence            9999999999999997654322110 0000      0000 0 0 0    000123455666665  6677777899999


Q ss_pred             HHHHHHc
Q 048419          599 RVVEFLL  605 (653)
Q Consensus       599 evl~~L~  605 (653)
                      |++++-.
T Consensus       301 ~~l~hp~  307 (381)
T cd05626         301 DIKAHPF  307 (381)
T ss_pred             HHhcCcc
Confidence            9998653

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=100.00  E-value=5.6e-38  Score=329.15  Aligned_cols=243  Identities=21%  Similarity=0.312  Sum_probs=195.0

Q ss_pred             eeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc---hhhHHHHHHHHHHHhhc-CCCceeeeeeeecccceeEEEEeccCC
Q 048419          336 NLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS---QQGMKEFVAEIMSMGRL-RHRNLVQLHGWCRKQDELLLVYDYVPN  411 (653)
Q Consensus       336 ~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~E~~~~  411 (653)
                      ++||+|+||.||+|.+..+|+.||+|.+....   ....+.+..|..++..+ +|+||+++++++.+.+..++||||+++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~   80 (316)
T cd05620           1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence            46999999999999999999999999996532   23445667788887765 899999999999999999999999999


Q ss_pred             CCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCCCC
Q 048419          412 GSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANP  491 (653)
Q Consensus       412 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~  491 (653)
                      |+|..++...     ..+++.++..++.|++.||+|||+   ++|+||||||+|||++.++.+||+|||+++...... .
T Consensus        81 g~L~~~i~~~-----~~~~~~~~~~~~~qi~~~l~~lH~---~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~  151 (316)
T cd05620          81 GDLMFHIQDK-----GRFDLYRATFYAAEIVCGLQFLHS---KGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGD-N  151 (316)
T ss_pred             CcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHeEECCCCCEEeCccCCCeecccCC-C
Confidence            9999988653     347889999999999999999999   899999999999999999999999999987432211 2


Q ss_pred             cccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhccCcC
Q 048419          492 QTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYY  571 (653)
Q Consensus       492 ~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~  571 (653)
                      ......||+.|+|||++.+..++.++|||||||++|||++|+.||.......   +.+.+..    .      .+   ..
T Consensus       152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~---~~~~~~~----~------~~---~~  215 (316)
T cd05620         152 RASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDE---LFESIRV----D------TP---HY  215 (316)
T ss_pred             ceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHH---HHHHHHh----C------CC---CC
Confidence            2234578999999999999899999999999999999999999997554321   1111110    0      00   01


Q ss_pred             CHHHHHHHHHHHHHcCCCCCCCCCCHH-HHHHH
Q 048419          572 DLAEAELVLNLGLFCSAPNPVYRPDMR-RVVEF  603 (653)
Q Consensus       572 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~-evl~~  603 (653)
                      +......+.+++.+||+.||.+||++. +++++
T Consensus       216 ~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~~h  248 (316)
T cd05620         216 PRWITKESKDILEKLFERDPTRRLGVVGNIRGH  248 (316)
T ss_pred             CCCCCHHHHHHHHHHccCCHHHcCCChHHHHcC
Confidence            111235678999999999999999985 66643

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=100.00  E-value=2.9e-38  Score=334.29  Aligned_cols=265  Identities=25%  Similarity=0.327  Sum_probs=200.0

Q ss_pred             CcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC--chhhHHHHHHHHHHHhhcCCCceeeeeeeeccc-----ceeE
Q 048419          331 GFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQ-----DELL  403 (653)
Q Consensus       331 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~-----~~~~  403 (653)
                      +|+..+.||+|+||.||+|....++..||||++...  .......+.+|++++++++||||+++++++...     ...+
T Consensus         1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~   80 (338)
T cd07859           1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY   80 (338)
T ss_pred             CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence            477889999999999999999988999999998643  233455788999999999999999999987543     2579


Q ss_pred             EEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcc
Q 048419          404 LVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK  483 (653)
Q Consensus       404 lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~  483 (653)
                      +|||||. ++|.+++...     ..+++..+..++.||++||.|||+   ++|+||||||+|||++.++.+||+|||+++
T Consensus        81 lv~e~~~-~~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~  151 (338)
T cd07859          81 VVFELME-SDLHQVIKAN-----DDLTPEHHQFFLYQLLRALKYIHT---ANVFHRDLKPKNILANADCKLKICDFGLAR  151 (338)
T ss_pred             EEEecCC-CCHHHHHHhc-----ccCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCcEEEccCcccc
Confidence            9999995 6898888653     348899999999999999999999   899999999999999999999999999998


Q ss_pred             cccCCCC--CcccccccCCcccCcccccc--CCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHh------
Q 048419          484 IYEHGAN--PQTTHIVGTLGYLAPELTRT--GKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKE------  553 (653)
Q Consensus       484 ~~~~~~~--~~~~~~~gt~~y~aPE~~~~--~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~------  553 (653)
                      .......  .......||..|+|||++.+  ..++.++|||||||++|||++|+.||.................      
T Consensus       152 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~  231 (338)
T cd07859         152 VAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPET  231 (338)
T ss_pred             ccccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHH
Confidence            6432211  11234578999999999865  5789999999999999999999999976443221111100000      


Q ss_pred             --hhcccchhHhhhhccCc--CC-----HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          554 --LHLEGEITQAIDQTLDY--YD-----LAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       554 --~~~~~~~~~~~d~~l~~--~~-----~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                        ........+.+......  ..     ......+.+++.+||+.||.+||++.|++++-
T Consensus       232 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp  291 (338)
T cd07859         232 ISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADP  291 (338)
T ss_pred             HHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCc
Confidence              00000001111100000  00     01235678999999999999999999999864

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=100.00  E-value=3.2e-38  Score=321.30  Aligned_cols=254  Identities=22%  Similarity=0.379  Sum_probs=205.9

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEecc
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYV  409 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~  409 (653)
                      ++|+..+.||+|+||.||+|...+ +..||+|.+.... ...+.+.+|+.++++++|+||+++++.+...+..+++|||+
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~~~-~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   83 (261)
T cd05072           6 ESIKLVKKLGAGQFGEVWMGYYNN-STKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYM   83 (261)
T ss_pred             HHeEEeeecCCcCCceEEEEEecC-CceEEEEEccCCc-hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecC
Confidence            467888999999999999999754 6789999986533 24578899999999999999999999999999999999999


Q ss_pred             CCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCC
Q 048419          410 PNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGA  489 (653)
Q Consensus       410 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~  489 (653)
                      ++++|.+++....   ...+++.+++.++.|++.||+|||+   .+++|+||||+||+++.++.+||+|||+++......
T Consensus        84 ~~~~L~~~l~~~~---~~~~~~~~~~~~~~~l~~~l~~LH~---~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~  157 (261)
T cd05072          84 AKGSLLDFLKSDE---GGKVLLPKLIDFSAQIAEGMAYIER---KNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNE  157 (261)
T ss_pred             CCCcHHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccchhhEEecCCCcEEECCCccceecCCCc
Confidence            9999999997643   3457889999999999999999999   899999999999999999999999999998764432


Q ss_pred             CCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhcc
Q 048419          490 NPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTL  568 (653)
Q Consensus       490 ~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l  568 (653)
                      ........++..|+|||++....++.++|||||||++|||++ |+.||.......   ....+.....        .+..
T Consensus       158 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~---~~~~~~~~~~--------~~~~  226 (261)
T cd05072         158 YTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSD---VMSALQRGYR--------MPRM  226 (261)
T ss_pred             eeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHH---HHHHHHcCCC--------CCCC
Confidence            222223345678999999988889999999999999999998 999986543321   1111111110        0111


Q ss_pred             CcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          569 DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       569 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                      .    .....+.+++.+||+.+|++||++.++.+.|+.
T Consensus       227 ~----~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  260 (261)
T cd05072         227 E----NCPDELYDIMKTCWKEKAEERPTFDYLQSVLDD  260 (261)
T ss_pred             C----CCCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence            1    123568899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=3.4e-39  Score=302.94  Aligned_cols=251  Identities=26%  Similarity=0.391  Sum_probs=213.2

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc---hhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS---QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVY  406 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  406 (653)
                      ++|++.+.||+|-||.||.|+.+.++-.||+|++.+..   .+..+++.+|+++-+.|+||||+++++|+.+....||++
T Consensus        22 ~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLil  101 (281)
T KOG0580|consen   22 DDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLIL  101 (281)
T ss_pred             hhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEEE
Confidence            56888999999999999999999999999999986542   233567899999999999999999999999999999999


Q ss_pred             eccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccccc
Q 048419          407 DYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE  486 (653)
Q Consensus       407 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~  486 (653)
                      ||.++|.|...|....   .+.+++...+.+..|+|.||.|+|.   ++|+||||||+|+|++..+..||+|||.+....
T Consensus       102 Eya~~gel~k~L~~~~---~~~f~e~~~a~Yi~q~A~Al~y~h~---k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p  175 (281)
T KOG0580|consen  102 EYAPRGELYKDLQEGR---MKRFDEQRAATYIKQLANALLYCHL---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP  175 (281)
T ss_pred             EecCCchHHHHHHhcc---cccccccchhHHHHHHHHHHHHhcc---CCcccCCCCHHHhccCCCCCeeccCCCceeecC
Confidence            9999999999998654   3558888889999999999999999   999999999999999999999999999987643


Q ss_pred             CCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhh
Q 048419          487 HGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQ  566 (653)
Q Consensus       487 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  566 (653)
                         .......+||..|.+||...+..++.+.|+|++|++.||++.|.+||+.....+   ....+...       +.   
T Consensus       176 ---~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~e---tYkrI~k~-------~~---  239 (281)
T KOG0580|consen  176 ---SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSE---TYKRIRKV-------DL---  239 (281)
T ss_pred             ---CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHH---HHHHHHHc-------cc---
Confidence               233455789999999999999999999999999999999999999998765322   11111111       11   


Q ss_pred             ccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          567 TLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       567 ~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                         .++......+.+++..|+..+|.+|.+..|++++-.
T Consensus       240 ---~~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hpw  275 (281)
T KOG0580|consen  240 ---KFPSTISGGAADLISRLLVKNPIERLALTEVMDHPW  275 (281)
T ss_pred             ---cCCcccChhHHHHHHHHhccCccccccHHHHhhhHH
Confidence               111223466889999999999999999999998753

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=8.1e-39  Score=339.09  Aligned_cols=249  Identities=27%  Similarity=0.354  Sum_probs=204.9

Q ss_pred             ceeeeeeCcEEEEEEEeCCCCc---E-EEEEEecc---CchhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEe
Q 048419          335 QNLVGSGGFGRVYRGLMPSLGL---E-VAIKRIGH---NSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYD  407 (653)
Q Consensus       335 ~~~LG~G~fg~Vy~~~~~~~~~---~-vavK~~~~---~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E  407 (653)
                      .++||+|.||.||+|.+...+.   . ||||....   ..+...++|++|+++|++++|||||+++|++.....++||||
T Consensus       162 ~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl~ivmE  241 (474)
T KOG0194|consen  162 GKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPLMLVME  241 (474)
T ss_pred             cceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCccEEEEE
Confidence            5899999999999999865422   3 89999874   346778899999999999999999999999999999999999


Q ss_pred             ccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccC
Q 048419          408 YVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEH  487 (653)
Q Consensus       408 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~  487 (653)
                      +|+||+|.++|....    ..++..++++++.+.|.||+|||+   ++++||||.++|+|++.++.+||+||||++.-..
T Consensus       242 l~~gGsL~~~L~k~~----~~v~~~ek~~~~~~AA~Gl~YLh~---k~~IHRDIAARNcL~~~~~~vKISDFGLs~~~~~  314 (474)
T KOG0194|consen  242 LCNGGSLDDYLKKNK----KSLPTLEKLRFCYDAARGLEYLHS---KNCIHRDIAARNCLYSKKGVVKISDFGLSRAGSQ  314 (474)
T ss_pred             ecCCCcHHHHHHhCC----CCCCHHHHHHHHHHHHhHHHHHHH---CCCcchhHhHHHheecCCCeEEeCccccccCCcc
Confidence            999999999998764    358999999999999999999999   9999999999999999999999999999885431


Q ss_pred             CCCCccc-ccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHH-HhhhcccchhHhh
Q 048419          488 GANPQTT-HIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWV-KELHLEGEITQAI  564 (653)
Q Consensus       488 ~~~~~~~-~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~  564 (653)
                        ..... ...-...|+|||.+..+.++.++|||||||++||+.+ |..|+.+....+   +..++ ...+.        
T Consensus       315 --~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~---v~~kI~~~~~r--------  381 (474)
T KOG0194|consen  315 --YVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYE---VKAKIVKNGYR--------  381 (474)
T ss_pred             --eeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHH---HHHHHHhcCcc--------
Confidence              11111 1124579999999999999999999999999999999 888998765432   22222 11111        


Q ss_pred             hhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcCC
Q 048419          565 DQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLGD  607 (653)
Q Consensus       565 d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  607 (653)
                          ...+...+..+..+...||..+|++||+|.++.+.|+..
T Consensus       382 ----~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~  420 (474)
T KOG0194|consen  382 ----MPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEAL  420 (474)
T ss_pred             ----CCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHH
Confidence                011113356677888899999999999999999998754

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=100.00  E-value=4.8e-38  Score=321.01  Aligned_cols=255  Identities=30%  Similarity=0.441  Sum_probs=206.8

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCC---CcEEEEEEeccC-chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSL---GLEVAIKRIGHN-SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLV  405 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~---~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV  405 (653)
                      ++|+..+.||+|+||.||+|.+...   ...||||.+... .......|.+|+..+++++|+||+++++++...+..++|
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv   83 (266)
T cd05033           4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMII   83 (266)
T ss_pred             HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEE
Confidence            5688899999999999999998643   457999998654 334456789999999999999999999999999999999


Q ss_pred             EeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccc
Q 048419          406 YDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIY  485 (653)
Q Consensus       406 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~  485 (653)
                      |||+++++|.+++....    ..+++.++++++.|++.||.|||+   ++|+|+||||+||++++++.+||+|||+++..
T Consensus        84 ~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~Lh~---~~i~H~di~p~nili~~~~~~~l~dfg~~~~~  156 (266)
T cd05033          84 TEYMENGSLDKFLREND----GKFTVGQLVGMLRGIASGMKYLSE---MNYVHRDLAARNILVNSNLVCKVSDFGLSRRL  156 (266)
T ss_pred             EEcCCCCCHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCcceEEEcCCCCEEECccchhhcc
Confidence            99999999999997643    358899999999999999999999   99999999999999999999999999999876


Q ss_pred             cCCCCC-cccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhhcccchhHh
Q 048419          486 EHGANP-QTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELHLEGEITQA  563 (653)
Q Consensus       486 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~  563 (653)
                      ...... ......++..|+|||.+.+..++.++||||||+++|||++ |..||.......   +.+.+......      
T Consensus       157 ~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~---~~~~~~~~~~~------  227 (266)
T cd05033         157 EDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQD---VIKAVEDGYRL------  227 (266)
T ss_pred             cccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHH---HHHHHHcCCCC------
Confidence            522111 1122344678999999998899999999999999999998 999986543321   11111111000      


Q ss_pred             hhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          564 IDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       564 ~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                            .........+.+++.+||+.+|++||++.||+++|+.
T Consensus       228 ------~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~  264 (266)
T cd05033         228 ------PPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDK  264 (266)
T ss_pred             ------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHh
Confidence                  0111234678899999999999999999999999964

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=100.00  E-value=1.5e-38  Score=323.56  Aligned_cols=255  Identities=26%  Similarity=0.416  Sum_probs=210.8

Q ss_pred             hcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEec
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDY  408 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~  408 (653)
                      ..+|...+.||+|+||.||+|.... +..+|+|.+..........+..|+.+++.++|+||+++++++...+..++||||
T Consensus         5 ~~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   83 (261)
T cd05148           5 REEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITEL   83 (261)
T ss_pred             HHHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEee
Confidence            4567788999999999999999987 889999999877665677899999999999999999999999999999999999


Q ss_pred             cCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCC
Q 048419          409 VPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHG  488 (653)
Q Consensus       409 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~  488 (653)
                      +++++|.+++....   ...+++.+++.++.||+.||.|||+   ++++|+||||+||++++++.+||+|||++......
T Consensus        84 ~~~~~L~~~~~~~~---~~~~~~~~~~~~~~~i~~al~~lH~---~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~  157 (261)
T cd05148          84 MEKGSLLAFLRSPE---GQVLPVASLIDMACQVAEGMAYLEE---QNSIHRDLAARNILVGEDLVCKVADFGLARLIKED  157 (261)
T ss_pred             cccCCHHHHHhcCC---CCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccCcceEEEcCCceEEEccccchhhcCCc
Confidence            99999999997653   3458999999999999999999999   89999999999999999999999999999866433


Q ss_pred             CCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhc
Q 048419          489 ANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQT  567 (653)
Q Consensus       489 ~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~  567 (653)
                      ... .....++..|+|||.+....++.++||||||+++++|++ |+.||......+   ....+.....           
T Consensus       158 ~~~-~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~---~~~~~~~~~~-----------  222 (261)
T cd05148         158 VYL-SSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHE---VYDQITAGYR-----------  222 (261)
T ss_pred             ccc-ccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHH---HHHHHHhCCc-----------
Confidence            221 123345678999999988889999999999999999998 889987544221   1111111000           


Q ss_pred             cCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          568 LDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       568 l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                       ..........+.+++.+||+.+|.+|||+.++++.|+.
T Consensus       223 -~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~  260 (261)
T cd05148         223 -MPCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDN  260 (261)
T ss_pred             -CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhc
Confidence             01112334678899999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.2e-38  Score=324.85  Aligned_cols=271  Identities=26%  Similarity=0.346  Sum_probs=201.0

Q ss_pred             cCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhh--cCCCceeeeeeeecccc----eeEEE
Q 048419          332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGR--LRHRNLVQLHGWCRKQD----ELLLV  405 (653)
Q Consensus       332 f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~H~niv~l~g~~~~~~----~~~lV  405 (653)
                      ....+++|+|+||.||||.+.  ++.||||++..   +..+.|.+|-.+.+.  ++|+||++++++-....    +++||
T Consensus       212 l~l~eli~~Grfg~V~KaqL~--~~~VAVKifp~---~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLV  286 (534)
T KOG3653|consen  212 LQLLELIGRGRFGCVWKAQLD--NRLVAVKIFPE---QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLV  286 (534)
T ss_pred             hhhHHHhhcCccceeehhhcc--CceeEEEecCH---HHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEE
Confidence            344678999999999999996  58999999854   445677777776665  58999999999876655    79999


Q ss_pred             EeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcC------CCCeEecCCCCCcEEEcCCCcEEEEee
Q 048419          406 YDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEEC------NQRVVHRDVKPSNILLDTYLNAKLGDF  479 (653)
Q Consensus       406 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~------~~~ivH~Dlkp~NIll~~~~~~kl~Df  479 (653)
                      +||.+.|+|.+||..+-      ++|....+|+.-+++||+|||++.      ..+|+|||||++||||.+|+++.|+||
T Consensus       287 t~fh~kGsL~dyL~~nt------isw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDF  360 (534)
T KOG3653|consen  287 TEFHPKGSLCDYLKANT------ISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADF  360 (534)
T ss_pred             eeeccCCcHHHHHHhcc------ccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeecc
Confidence            99999999999998754      899999999999999999999864      457999999999999999999999999


Q ss_pred             cCcccccCCCCC-cccccccCCcccCccccccCC-C-----CCccceeehHHHHHHHHhCCCCCCh-hhhhhHHHHHHHH
Q 048419          480 GLAKIYEHGANP-QTTHIVGTLGYLAPELTRTGK-A-----TTSTDVYSYGILMLEVACGRRSIEP-QKAAAELLLVDWV  551 (653)
Q Consensus       480 Gla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~-~-----~~ksDV~s~Gvvl~elltG~~p~~~-~~~~~~~~l~~~~  551 (653)
                      |+|..+..+... .....+||.+|||||++.+.. +     -.+.||||+|.|||||++...-.+. ..+.-+..+...+
T Consensus       361 GLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~ev  440 (534)
T KOG3653|consen  361 GLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEV  440 (534)
T ss_pred             ceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHh
Confidence            999988755433 233468999999999997642 2     2478999999999999997644421 1111011111111


Q ss_pred             HhhhcccchhHhhh-----hcc--CcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcCCCCCCCC
Q 048419          552 KELHLEGEITQAID-----QTL--DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLGDSSLPPL  613 (653)
Q Consensus       552 ~~~~~~~~~~~~~d-----~~l--~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~p~~  613 (653)
                      .....-+++.+.+-     |.+  .+..-..+..+.+.+..||+.||+.|-|+.=|.+++.....+++.
T Consensus       441 G~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~~~  509 (534)
T KOG3653|consen  441 GNHPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLWED  509 (534)
T ss_pred             cCCCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccCCc
Confidence            11111111111110     111  011113467799999999999999999999999888765555443

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=5.2e-39  Score=320.31  Aligned_cols=250  Identities=25%  Similarity=0.396  Sum_probs=213.7

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC---chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN---SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVY  406 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  406 (653)
                      -+|++.+.||+|.||.|-+++....|..||||.+++.   +.++.-.+.+|+++|+.|+||||+.++.+|+..+.+.|||
T Consensus        53 HRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivM  132 (668)
T KOG0611|consen   53 HRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVM  132 (668)
T ss_pred             hHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEE
Confidence            3566678899999999999999888999999999764   5556667889999999999999999999999999999999


Q ss_pred             eccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccccc
Q 048419          407 DYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE  486 (653)
Q Consensus       407 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~  486 (653)
                      ||..+|.|++|+.+..     .|++.+.+.+++||.+|+.|+|.   ++++|||||.+|||||.++++||+||||+-++.
T Consensus       133 EYaS~GeLYDYiSer~-----~LsErEaRhfFRQIvSAVhYCHk---nrVvHRDLKLENILLD~N~NiKIADFGLSNly~  204 (668)
T KOG0611|consen  133 EYASGGELYDYISERG-----SLSEREARHFFRQIVSAVHYCHK---NRVVHRDLKLENILLDQNNNIKIADFGLSNLYA  204 (668)
T ss_pred             EecCCccHHHHHHHhc-----cccHHHHHHHHHHHHHHHHHHhh---ccceecccchhheeecCCCCeeeeccchhhhhc
Confidence            9999999999998754     49999999999999999999999   999999999999999999999999999998876


Q ss_pred             CCCCCcccccccCCcccCccccccCCCC-CccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhh
Q 048419          487 HGANPQTTHIVGTLGYLAPELTRTGKAT-TSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAID  565 (653)
Q Consensus       487 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d  565 (653)
                      ...  ....++|++-|.+||++.+..|. +..|-|||||+||.|+.|.-||++.+...   ++..+    ..|..     
T Consensus       205 ~~k--fLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~---lvrQI----s~GaY-----  270 (668)
T KOG0611|consen  205 DKK--FLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKR---LVRQI----SRGAY-----  270 (668)
T ss_pred             ccc--HHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHH---HHHHh----hcccc-----
Confidence            433  44567999999999999988774 69999999999999999999999865431   11111    11111     


Q ss_pred             hccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          566 QTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       566 ~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                           ...+.+....-|+.|||-.||++|-|+.+|..+.+-
T Consensus       271 -----rEP~~PSdA~gLIRwmLmVNP~RRATieDiAsHWWv  306 (668)
T KOG0611|consen  271 -----REPETPSDASGLIRWMLMVNPERRATIEDIASHWWV  306 (668)
T ss_pred             -----cCCCCCchHHHHHHHHHhcCcccchhHHHHhhhhee
Confidence                 112234557789999999999999999999998864

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=100.00  E-value=5.3e-38  Score=324.93  Aligned_cols=263  Identities=26%  Similarity=0.356  Sum_probs=197.2

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCC-CCcEEEEEEeccCc--hhhHHHHHHHHHHHhhc---CCCceeeeeeeec-----c
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPS-LGLEVAIKRIGHNS--QQGMKEFVAEIMSMGRL---RHRNLVQLHGWCR-----K  398 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l---~H~niv~l~g~~~-----~  398 (653)
                      ++|+..+.||+|+||.||+|.+.. ++..||||++....  ......+.+|+.+++++   +||||++++++|.     .
T Consensus         1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~   80 (290)
T cd07862           1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR   80 (290)
T ss_pred             CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence            368889999999999999999753 46889999986432  22234556677776665   6999999999885     2


Q ss_pred             cceeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEe
Q 048419          399 QDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGD  478 (653)
Q Consensus       399 ~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D  478 (653)
                      ...+++||||++ ++|.+++....   ...+++.+++.++.||+.||.|||+   ++|+||||||+|||++.++.+||+|
T Consensus        81 ~~~~~lv~e~~~-~~l~~~~~~~~---~~~~~~~~~~~i~~qi~~aL~~lH~---~~iiH~dlkp~Nil~~~~~~~kl~D  153 (290)
T cd07862          81 ETKLTLVFEHVD-QDLTTYLDKVP---EPGVPTETIKDMMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLAD  153 (290)
T ss_pred             CCcEEEEEccCC-CCHHHHHHhCC---CCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEEcCCCCEEEcc
Confidence            446899999996 68999887643   3458899999999999999999999   9999999999999999999999999


Q ss_pred             ecCcccccCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhh--c
Q 048419          479 FGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELH--L  556 (653)
Q Consensus       479 fGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~--~  556 (653)
                      ||+++.....  .......|++.|+|||.+.+..++.++|||||||++|||++|+.||......+...  ..+....  .
T Consensus       154 fg~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~--~i~~~~~~~~  229 (290)
T cd07862         154 FGLARIYSFQ--MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLG--KILDVIGLPG  229 (290)
T ss_pred             ccceEeccCC--cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHH--HHHHHhCCCC
Confidence            9999865433  22334568999999999988889999999999999999999999998654432211  1111100  0


Q ss_pred             ccchhHh---hhhcc---CcCC-----HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 048419          557 EGEITQA---IDQTL---DYYD-----LAEAELVLNLGLFCSAPNPVYRPDMRRVVEF  603 (653)
Q Consensus       557 ~~~~~~~---~d~~l---~~~~-----~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  603 (653)
                      .......   ....+   ....     ......+.+++.+||+.||++|||+.|++++
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~h  287 (290)
T cd07862         230 EEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH  287 (290)
T ss_pred             hhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcC
Confidence            0000000   00000   0000     1123567899999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=100.00  E-value=6e-38  Score=335.46  Aligned_cols=204  Identities=25%  Similarity=0.362  Sum_probs=177.9

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc---hhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS---QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVY  406 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  406 (653)
                      ++|+..+.||+|+||+||++....+++.||||++....   ......+..|+.++.+++|+||+++++.+.+...+++||
T Consensus         1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~   80 (363)
T cd05628           1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM   80 (363)
T ss_pred             CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence            46888999999999999999999889999999996532   233457788999999999999999999999999999999


Q ss_pred             eccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccccc
Q 048419          407 DYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE  486 (653)
Q Consensus       407 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~  486 (653)
                      ||+++|+|.+++...     ..+++.++..++.|++.||+|||+   ++|+||||||+|||++.++.+||+|||+++...
T Consensus        81 E~~~gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~lH~---~givHrDlKp~NILi~~~~~vkL~DFGla~~~~  152 (363)
T cd05628          81 EFLPGGDMMTLLMKK-----DTLTEEETQFYIAETVLAIDSIHQ---LGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLK  152 (363)
T ss_pred             cCCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCeEecCCCHHHeEECCCCCEEEeeccCccccc
Confidence            999999999999754     348899999999999999999999   999999999999999999999999999987543


Q ss_pred             CCCC----------------------------------CcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhC
Q 048419          487 HGAN----------------------------------PQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACG  532 (653)
Q Consensus       487 ~~~~----------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG  532 (653)
                      ....                                  .......||+.|+|||++.+..++.++|||||||++|||++|
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G  232 (363)
T cd05628         153 KAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIG  232 (363)
T ss_pred             ccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhC
Confidence            2110                                  001234799999999999988999999999999999999999


Q ss_pred             CCCCChhhh
Q 048419          533 RRSIEPQKA  541 (653)
Q Consensus       533 ~~p~~~~~~  541 (653)
                      +.||.....
T Consensus       233 ~~Pf~~~~~  241 (363)
T cd05628         233 YPPFCSETP  241 (363)
T ss_pred             CCCCCCCCH
Confidence            999976543

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=100.00  E-value=8.1e-38  Score=316.96  Aligned_cols=251  Identities=27%  Similarity=0.429  Sum_probs=208.2

Q ss_pred             CcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC--chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEec
Q 048419          331 GFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDY  408 (653)
Q Consensus       331 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~  408 (653)
                      +|...+.||+|++|.||+|....+++.|++|.+...  .....+.+.+|++++++++|||++++++++.+.+..++||||
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08529           1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY   80 (256)
T ss_pred             CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence            467789999999999999999988999999998643  344567889999999999999999999999999999999999


Q ss_pred             cCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCC
Q 048419          409 VPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHG  488 (653)
Q Consensus       409 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~  488 (653)
                      +++++|.+++....   ...+++.+++.++.|++.||.|||+   ++++|+||||+||++++++.+||+|||+++.....
T Consensus        81 ~~~~~L~~~l~~~~---~~~~~~~~~~~i~~~l~~al~~lH~---~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~  154 (256)
T cd08529          81 AENGDLHKLLKMQR---GRPLPEDQVWRFFIQILLGLAHLHS---KKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDN  154 (256)
T ss_pred             CCCCcHHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcceEEEeCCCCEEEcccccceeccCc
Confidence            99999999997643   3458899999999999999999999   89999999999999999999999999999866443


Q ss_pred             CCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhcc
Q 048419          489 ANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTL  568 (653)
Q Consensus       489 ~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l  568 (653)
                      .. ......|+..|+|||+..+..++.++|||||||+++||++|+.||.......   ....+.    .+.        .
T Consensus       155 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~---~~~~~~----~~~--------~  218 (256)
T cd08529         155 TN-FANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGA---LILKII----RGV--------F  218 (256)
T ss_pred             cc-hhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHH----cCC--------C
Confidence            22 1223467889999999998889999999999999999999999997654321   111111    111        1


Q ss_pred             CcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 048419          569 DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEF  603 (653)
Q Consensus       569 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  603 (653)
                      ..........+.+++.+||+.+|++||++.+++++
T Consensus       219 ~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~  253 (256)
T cd08529         219 PPVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN  253 (256)
T ss_pred             CCCccccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence            11111334678999999999999999999999875

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=100.00  E-value=1.4e-37  Score=326.20  Aligned_cols=242  Identities=24%  Similarity=0.335  Sum_probs=195.1

Q ss_pred             eeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc---hhhHHHHHHHHHHHhhc-CCCceeeeeeeecccceeEEEEeccCC
Q 048419          336 NLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS---QQGMKEFVAEIMSMGRL-RHRNLVQLHGWCRKQDELLLVYDYVPN  411 (653)
Q Consensus       336 ~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~E~~~~  411 (653)
                      +.||+|+||.||+|.+..+++.||||++....   ....+.+..|..+++.+ +||||+++++++.+.+.+++||||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~   80 (316)
T cd05619           1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence            46999999999999999889999999986531   23345567788888764 899999999999999999999999999


Q ss_pred             CCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCCCC
Q 048419          412 GSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANP  491 (653)
Q Consensus       412 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~  491 (653)
                      |+|.+++...     ..+++.++..++.|++.||.|||+   ++|+||||||+|||++.++.+||+|||+++...... .
T Consensus        81 g~L~~~l~~~-----~~~~~~~~~~~~~qi~~al~~LH~---~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~  151 (316)
T cd05619          81 GDLMFHIQSC-----HKFDLPRATFYAAEIICGLQFLHS---KGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGD-A  151 (316)
T ss_pred             CcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCeEeCCCCHHHEEECCCCCEEEccCCcceECCCCC-C
Confidence            9999998653     347889999999999999999999   899999999999999999999999999987532211 2


Q ss_pred             cccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhccCcC
Q 048419          492 QTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYY  571 (653)
Q Consensus       492 ~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~  571 (653)
                      ......||+.|+|||.+.+..++.++|||||||++|||++|+.||.......   +...+...          .+.   +
T Consensus       152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~---~~~~i~~~----------~~~---~  215 (316)
T cd05619         152 KTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEE---LFQSIRMD----------NPC---Y  215 (316)
T ss_pred             ceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHH---HHHHHHhC----------CCC---C
Confidence            2234578999999999998899999999999999999999999997654321   11111100          000   1


Q ss_pred             CHHHHHHHHHHHHHcCCCCCCCCCCHH-HHHH
Q 048419          572 DLAEAELVLNLGLFCSAPNPVYRPDMR-RVVE  602 (653)
Q Consensus       572 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~-evl~  602 (653)
                      +......+.+++.+||+.||.+||++. ++.+
T Consensus       216 ~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~  247 (316)
T cd05619         216 PRWLTREAKDILVKLFVREPERRLGVKGDIRQ  247 (316)
T ss_pred             CccCCHHHHHHHHHHhccCHhhcCCChHHHHc
Confidence            111235678999999999999999997 6655

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=6.9e-38  Score=318.94  Aligned_cols=255  Identities=25%  Similarity=0.377  Sum_probs=206.3

Q ss_pred             hcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEec
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDY  408 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~  408 (653)
                      .++|+..+.||+|++|.||+|.... +..||+|.+.... ...+++.+|++.+++++|+||+++++++...+..++||||
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~~~-~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   82 (261)
T cd05068           5 RTSIQLLRKLGAGQFGEVWEGLWNN-TTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTEL   82 (261)
T ss_pred             hhheeeEEEecccCCccEEEEEecC-CeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeec
Confidence            3568889999999999999999754 5789999986543 2356788999999999999999999999999999999999


Q ss_pred             cCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCC
Q 048419          409 VPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHG  488 (653)
Q Consensus       409 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~  488 (653)
                      +++++|.+++....   ...+++.++..++.|++.||.|||+   ++++|+||||+||++++++.+||+|||+++.....
T Consensus        83 ~~~~~L~~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~  156 (261)
T cd05068          83 MKYGSLLEYLQGGA---GRALKLPQLIDMAAQVASGMAYLEA---QNYIHRDLAARNVLVGENNICKVADFGLARVIKED  156 (261)
T ss_pred             ccCCcHHHHHhccC---CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCCcceEEEcCCCCEEECCcceEEEccCC
Confidence            99999999997653   3458999999999999999999999   89999999999999999999999999999876532


Q ss_pred             CCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhc
Q 048419          489 ANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQT  567 (653)
Q Consensus       489 ~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~  567 (653)
                      ..........+..|+|||.+.+..++.++||||||++++||++ |+.||.......   +...+....   .        
T Consensus       157 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~---~~~~~~~~~---~--------  222 (261)
T cd05068         157 IYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAE---VLQQVDQGY---R--------  222 (261)
T ss_pred             cccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHH---HHHHHHcCC---C--------
Confidence            2221222223457999999998899999999999999999999 999987543321   111111100   0        


Q ss_pred             cCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          568 LDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       568 l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                      + .........+.+++.+|++.+|.+||++.++++.|+.
T Consensus       223 ~-~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~  260 (261)
T cd05068         223 M-PCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLED  260 (261)
T ss_pred             C-CCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence            0 0111234678999999999999999999999999974

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=100.00  E-value=7e-38  Score=329.64  Aligned_cols=247  Identities=25%  Similarity=0.330  Sum_probs=197.6

Q ss_pred             cCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc---hhhHHHHHHHHHHH---hhcCCCceeeeeeeecccceeEEE
Q 048419          332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS---QQGMKEFVAEIMSM---GRLRHRNLVQLHGWCRKQDELLLV  405 (653)
Q Consensus       332 f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l---~~l~H~niv~l~g~~~~~~~~~lV  405 (653)
                      |+..+.||+|+||.||+|.+..+++.||||++....   ....+.+..|+.++   ++++||||+++++++...+..++|
T Consensus         1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv   80 (324)
T cd05589           1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV   80 (324)
T ss_pred             CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence            566889999999999999999889999999996432   23345566666554   567899999999999999999999


Q ss_pred             EeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccc
Q 048419          406 YDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIY  485 (653)
Q Consensus       406 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~  485 (653)
                      |||+++++|..++..      ..+++.+++.++.||+.||.|||+   ++|+||||||+||+++.++.+||+|||+++..
T Consensus        81 ~E~~~~~~L~~~~~~------~~l~~~~~~~~~~qi~~al~~lH~---~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~  151 (324)
T cd05589          81 MEYAAGGDLMMHIHT------DVFSEPRAVFYAACVVLGLQYLHE---NKIVYRDLKLDNLLLDTEGFVKIADFGLCKEG  151 (324)
T ss_pred             EcCCCCCcHHHHhhc------CCCCHHHHHHHHHHHHHHHHHHHh---CCeEecCCCHHHeEECCCCcEEeCcccCCccC
Confidence            999999999888754      248999999999999999999999   99999999999999999999999999998753


Q ss_pred             cCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhh
Q 048419          486 EHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAID  565 (653)
Q Consensus       486 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d  565 (653)
                      .... .......|++.|+|||.+.+..++.++|||||||++|||++|+.||........   ...+.    .+.      
T Consensus       152 ~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~---~~~i~----~~~------  217 (324)
T cd05589         152 MGFG-DRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEV---FDSIV----NDE------  217 (324)
T ss_pred             CCCC-CcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHH---HHHHH----hCC------
Confidence            2211 222345789999999999988999999999999999999999999976543211   11000    000      


Q ss_pred             hccCcCCHHHHHHHHHHHHHcCCCCCCCCC-----CHHHHHHHH
Q 048419          566 QTLDYYDLAEAELVLNLGLFCSAPNPVYRP-----DMRRVVEFL  604 (653)
Q Consensus       566 ~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~L  604 (653)
                        . .++......+.+++.+||+.||.+||     ++.+++++.
T Consensus       218 --~-~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~  258 (324)
T cd05589         218 --V-RYPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQP  258 (324)
T ss_pred             --C-CCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCC
Confidence              0 01112245678999999999999999     577777654

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=7.5e-39  Score=333.14  Aligned_cols=252  Identities=24%  Similarity=0.353  Sum_probs=214.7

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC--chhhHHHHHHHHHHHhhcCCCceeeeeeeecccce-eEEEE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDE-LLLVY  406 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~-~~lV~  406 (653)
                      ++|...+++|+|+||.++.++++.++..+++|.+...  .....+...+|+.++++++|||||.+.+.+.+++. ++|||
T Consensus         4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm   83 (426)
T KOG0589|consen    4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM   83 (426)
T ss_pred             chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence            4677789999999999999999999999999998654  33344567899999999999999999999999988 99999


Q ss_pred             eccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccccc
Q 048419          407 DYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE  486 (653)
Q Consensus       407 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~  486 (653)
                      +||+||+|.+.+.+..   +..++++++++++.|++.|+.|||+   +.|+|||||+.|||++.+..+||+|||+|+.+.
T Consensus        84 ~Y~eGg~l~~~i~~~k---~~~f~E~~i~~~~~Q~~~av~ylH~---~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~  157 (426)
T KOG0589|consen   84 EYCEGGDLAQLIKEQK---GVLFPEERILKWFVQILLAVNYLHE---NRVLHRDLKCANIFLTKDKKVKLGDFGLAKILN  157 (426)
T ss_pred             eecCCCCHHHHHHHHh---hccccHHHHHHHHHHHHHHHHHHHh---hhhhcccchhhhhhccccCceeecchhhhhhcC
Confidence            9999999999998765   4678999999999999999999998   999999999999999999999999999999886


Q ss_pred             CCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhh
Q 048419          487 HGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQ  566 (653)
Q Consensus       487 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  566 (653)
                      ... .......||+.|+.||.+.+..|..|+|||||||++|||++-+++|...+-..   ++            .++...
T Consensus       158 ~~~-~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~---Li------------~ki~~~  221 (426)
T KOG0589|consen  158 PED-SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSE---LI------------LKINRG  221 (426)
T ss_pred             Cch-hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHH---HH------------HHHhhc
Confidence            643 23445789999999999999999999999999999999999999998654321   11            111111


Q ss_pred             ccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 048419          567 TLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEF  603 (653)
Q Consensus       567 ~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  603 (653)
                      .....+......+..++..|++.+|..||++.+++.+
T Consensus       222 ~~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~  258 (426)
T KOG0589|consen  222 LYSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR  258 (426)
T ss_pred             cCCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence            1122334456788999999999999999999999975

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=100.00  E-value=9.1e-38  Score=328.17  Aligned_cols=243  Identities=23%  Similarity=0.366  Sum_probs=197.2

Q ss_pred             eeeeeeCcEEEEEEEeCCCCcEEEEEEeccC---chhhHHHHHHHHHHHhhc-CCCceeeeeeeecccceeEEEEeccCC
Q 048419          336 NLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN---SQQGMKEFVAEIMSMGRL-RHRNLVQLHGWCRKQDELLLVYDYVPN  411 (653)
Q Consensus       336 ~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~E~~~~  411 (653)
                      +.||+|+||.||+|+...+++.||||++...   .....+.+..|..++..+ +||||+++++++...+.+++||||+++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~   80 (320)
T cd05590           1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG   80 (320)
T ss_pred             CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence            4699999999999999988999999998643   233456778888888877 699999999999999999999999999


Q ss_pred             CCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCCCC
Q 048419          412 GSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANP  491 (653)
Q Consensus       412 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~  491 (653)
                      |+|.+++...     ..+++..+..++.|++.||.|||+   ++|+||||||+|||++.++.+||+|||+++...... .
T Consensus        81 g~L~~~i~~~-----~~l~~~~~~~~~~ql~~~L~~lH~---~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~-~  151 (320)
T cd05590          81 GDLMFHIQKS-----RRFDEARARFYAAEITSALMFLHD---KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNG-K  151 (320)
T ss_pred             chHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCC-C
Confidence            9999988654     348899999999999999999999   999999999999999999999999999987542221 2


Q ss_pred             cccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhccCcC
Q 048419          492 QTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYY  571 (653)
Q Consensus       492 ~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~  571 (653)
                      ......||+.|+|||.+.+..++.++|||||||++|||++|+.||.......   +...+.    .+..         ..
T Consensus       152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~---~~~~i~----~~~~---------~~  215 (320)
T cd05590         152 TTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDD---LFEAIL----NDEV---------VY  215 (320)
T ss_pred             cccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHH---HHHHHh----cCCC---------CC
Confidence            2234578999999999998889999999999999999999999997654321   111111    1100         01


Q ss_pred             CHHHHHHHHHHHHHcCCCCCCCCCCH------HHHHHH
Q 048419          572 DLAEAELVLNLGLFCSAPNPVYRPDM------RRVVEF  603 (653)
Q Consensus       572 ~~~~~~~l~~l~~~Cl~~dP~~RPs~------~evl~~  603 (653)
                      +......+.+++.+||+.||.+||++      .+++++
T Consensus       216 ~~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h  253 (320)
T cd05590         216 PTWLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRH  253 (320)
T ss_pred             CCCCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcC
Confidence            11124567899999999999999998      666654

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=100.00  E-value=6.6e-38  Score=331.06  Aligned_cols=267  Identities=24%  Similarity=0.345  Sum_probs=207.1

Q ss_pred             hcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC-chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEe
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN-SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYD  407 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E  407 (653)
                      .++|+..+.||+|+||.||++.+..++..+|+|.+... .....+.+.+|++++++++|+||++++++|.+.+..++|||
T Consensus         4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   83 (333)
T cd06650           4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME   83 (333)
T ss_pred             hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEe
Confidence            36788999999999999999999988999999998654 33445678999999999999999999999999999999999


Q ss_pred             ccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccC
Q 048419          408 YVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEH  487 (653)
Q Consensus       408 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~  487 (653)
                      |+++++|.+++...     ..+++.....++.|++.||.|||+.  .+++|+||||+|||++.++.+||+|||++.....
T Consensus        84 ~~~~~~L~~~l~~~-----~~~~~~~~~~~~~~l~~~l~~lH~~--~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~  156 (333)
T cd06650          84 HMDGGSLDQVLKKA-----GRIPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID  156 (333)
T ss_pred             cCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHhc--CCEEecCCChhhEEEcCCCCEEEeeCCcchhhhh
Confidence            99999999999653     3478888999999999999999972  4799999999999999999999999999876532


Q ss_pred             CCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHH-HHhhhc----------
Q 048419          488 GANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDW-VKELHL----------  556 (653)
Q Consensus       488 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~-~~~~~~----------  556 (653)
                      .   ......|+..|+|||.+.+..++.++|||||||++|||++|+.||.............. ......          
T Consensus       157 ~---~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (333)
T cd06650         157 S---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRP  233 (333)
T ss_pred             h---ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCC
Confidence            2   12234688999999999988899999999999999999999999975433211100000 000000          


Q ss_pred             --------------ccchhHhhhhccCc----CC-HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          557 --------------EGEITQAIDQTLDY----YD-LAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       557 --------------~~~~~~~~d~~l~~----~~-~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                                    ........+.....    .. ......+.+++.+||+.||++||++.|++++-.
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~  301 (333)
T cd06650         234 PGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAF  301 (333)
T ss_pred             ccchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhCHH
Confidence                          00000111111100    00 012356889999999999999999999987653

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=100.00  E-value=5.4e-38  Score=329.32  Aligned_cols=255  Identities=26%  Similarity=0.373  Sum_probs=203.0

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCc----EEEEEEeccC-chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGL----EVAIKRIGHN-SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLL  404 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~----~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  404 (653)
                      .+|+..+.||+|+||.||+|.+..++.    .||+|.+... .....+++.+|+.+++.++|+||++++|+|... ..++
T Consensus         7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~   85 (316)
T cd05108           7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL   85 (316)
T ss_pred             hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Ccee
Confidence            458889999999999999999765554    4899998654 334567889999999999999999999999765 5789


Q ss_pred             EEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccc
Q 048419          405 VYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKI  484 (653)
Q Consensus       405 V~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~  484 (653)
                      ++||+++|+|.+++....    ..+++..+++++.||+.||+|||+   ++|+||||||+|||++.++.+||+|||+++.
T Consensus        86 v~e~~~~g~l~~~l~~~~----~~~~~~~~~~~~~qi~~~L~~LH~---~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~  158 (316)
T cd05108          86 ITQLMPFGCLLDYVREHK----DNIGSQYLLNWCVQIAKGMNYLEE---RRLVHRDLAARNVLVKTPQHVKITDFGLAKL  158 (316)
T ss_pred             eeecCCCCCHHHHHHhcc----ccCCHHHHHHHHHHHHHHHHHHHh---cCeeccccchhheEecCCCcEEEcccccccc
Confidence            999999999999997643    347889999999999999999999   8999999999999999999999999999987


Q ss_pred             ccCCCCCcc-cccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhhcccchhH
Q 048419          485 YEHGANPQT-THIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELHLEGEITQ  562 (653)
Q Consensus       485 ~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~  562 (653)
                      ......... ....++..|+|||.+.+..++.++|||||||++|||++ |+.|+.......   +......    +.   
T Consensus       159 ~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~---~~~~~~~----~~---  228 (316)
T cd05108         159 LGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---ISSILEK----GE---  228 (316)
T ss_pred             ccCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHH---HHHHHhC----CC---
Confidence            654322211 12234678999999998899999999999999999998 999987543221   1111111    00   


Q ss_pred             hhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcCC
Q 048419          563 AIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLGD  607 (653)
Q Consensus       563 ~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  607 (653)
                          .+ ..+..+...+.+++.+||+.+|.+||++.++++.|...
T Consensus       229 ----~~-~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~  268 (316)
T cd05108         229 ----RL-PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM  268 (316)
T ss_pred             ----CC-CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence                00 00111235688999999999999999999999988643

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=100.00  E-value=1.4e-37  Score=326.11  Aligned_cols=242  Identities=21%  Similarity=0.314  Sum_probs=193.7

Q ss_pred             eeeeeeCcEEEEEEEeCCCCcEEEEEEeccC---chhhHHHHHHHHHHHhhc-CCCceeeeeeeecccceeEEEEeccCC
Q 048419          336 NLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN---SQQGMKEFVAEIMSMGRL-RHRNLVQLHGWCRKQDELLLVYDYVPN  411 (653)
Q Consensus       336 ~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~E~~~~  411 (653)
                      ++||+|+||.||+|....+++.||||++...   .....+.+..|..++..+ +||||+++++++...+..++||||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g   80 (316)
T cd05592           1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            4699999999999999988999999998653   223344556677777654 899999999999999999999999999


Q ss_pred             CCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCCCC
Q 048419          412 GSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANP  491 (653)
Q Consensus       412 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~  491 (653)
                      |+|..++...     ..+++.++..++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+++...... .
T Consensus        81 g~L~~~~~~~-----~~~~~~~~~~~~~qi~~al~~LH~---~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~-~  151 (316)
T cd05592          81 GDLMFHIQSS-----GRFDEARARFYAAEIICGLQFLHK---KGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE-G  151 (316)
T ss_pred             CcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCC-C
Confidence            9999988654     248888999999999999999999   999999999999999999999999999998543222 2


Q ss_pred             cccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhccCcC
Q 048419          492 QTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYY  571 (653)
Q Consensus       492 ~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~  571 (653)
                      ......||+.|+|||.+.+..++.++|||||||++|||++|+.||.......   +...+..             .....
T Consensus       152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~---~~~~i~~-------------~~~~~  215 (316)
T cd05592         152 KASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDE---LFDSILN-------------DRPHF  215 (316)
T ss_pred             ccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHH---HHHHHHc-------------CCCCC
Confidence            2334578999999999998889999999999999999999999997654321   1111100             00011


Q ss_pred             CHHHHHHHHHHHHHcCCCCCCCCCCHH-HHHH
Q 048419          572 DLAEAELVLNLGLFCSAPNPVYRPDMR-RVVE  602 (653)
Q Consensus       572 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~-evl~  602 (653)
                      +......+.+++.+||+.||.+||++. ++++
T Consensus       216 ~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~  247 (316)
T cd05592         216 PRWISKEAKDCLSKLFERDPTKRLGVDGDIRQ  247 (316)
T ss_pred             CCCCCHHHHHHHHHHccCCHHHcCCChHHHHc
Confidence            112345678999999999999999975 5554

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=100.00  E-value=3.4e-38  Score=349.21  Aligned_cols=262  Identities=23%  Similarity=0.330  Sum_probs=210.1

Q ss_pred             HHHHHhhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC--chhhHHHHHHHHHHHhhcCCCceeeeeeeecccc
Q 048419          323 AELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQD  400 (653)
Q Consensus       323 ~el~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~  400 (653)
                      .+.....++|...+.||+|+||.||+|....+++.||||++...  .......+.+|+..+..++|+|+++++..+...+
T Consensus        25 ~~~~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~  104 (496)
T PTZ00283         25 ATAKEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKD  104 (496)
T ss_pred             ccccccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceeccc
Confidence            44455668999999999999999999999888999999998654  3445667889999999999999999988764432


Q ss_pred             --------eeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCC
Q 048419          401 --------ELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYL  472 (653)
Q Consensus       401 --------~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~  472 (653)
                              .+++||||+++|+|.+++...... ...+++..++.++.|++.||.|||+   ++|+||||||+|||++.++
T Consensus       105 ~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~-~~~l~e~~~~~i~~qll~aL~~lH~---~~IiHrDLKP~NILl~~~~  180 (496)
T PTZ00283        105 PRNPENVLMIALVLDYANAGDLRQEIKSRAKT-NRTFREHEAGLLFIQVLLAVHHVHS---KHMIHRDIKSANILLCSNG  180 (496)
T ss_pred             ccCcccceEEEEEEeCCCCCcHHHHHHHhhcc-CCCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEeCCC
Confidence                    368999999999999999764321 3468899999999999999999999   8999999999999999999


Q ss_pred             cEEEEeecCcccccCCCC-CcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHH
Q 048419          473 NAKLGDFGLAKIYEHGAN-PQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWV  551 (653)
Q Consensus       473 ~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~  551 (653)
                      .+||+|||+++....... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.......      .+
T Consensus       181 ~vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~------~~  254 (496)
T PTZ00283        181 LVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEE------VM  254 (496)
T ss_pred             CEEEEecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH------HH
Confidence            999999999986543221 12234579999999999999899999999999999999999999997543321      11


Q ss_pred             HhhhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 048419          552 KELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEF  603 (653)
Q Consensus       552 ~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  603 (653)
                      .... .+..        ...+......+.+++.+||+.||.+||++.+++++
T Consensus       255 ~~~~-~~~~--------~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~  297 (496)
T PTZ00283        255 HKTL-AGRY--------DPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM  297 (496)
T ss_pred             HHHh-cCCC--------CCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence            1100 1110        11112234678899999999999999999999875

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=100.00  E-value=7.6e-38  Score=322.37  Aligned_cols=250  Identities=24%  Similarity=0.336  Sum_probs=199.6

Q ss_pred             eeeeCcEEEEEEEeCCCCcEEEEEEeccCc---hhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEeccCCCCc
Q 048419          338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNS---QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSL  414 (653)
Q Consensus       338 LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL  414 (653)
                      ||+|+||+||++.+..+++.||+|.+....   ....+.+..|+.++++++|+||+++.+++...+..++||||+++|+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L   80 (280)
T cd05608           1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL   80 (280)
T ss_pred             CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence            699999999999999889999999986432   22345678899999999999999999999999999999999999999


Q ss_pred             hhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCCCCccc
Q 048419          415 DKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTT  494 (653)
Q Consensus       415 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~  494 (653)
                      ..++..... ....+++.+++.++.||+.||.|||+   ++|+||||||+||+++.++.+||+|||++........ ...
T Consensus        81 ~~~~~~~~~-~~~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~-~~~  155 (280)
T cd05608          81 RYHIYNVDE-ENPGFPEPRACFYTAQIISGLEHLHQ---RRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQS-KTK  155 (280)
T ss_pred             HHHHHhccc-cCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEeeCccceecCCCCc-ccc
Confidence            988754321 13468999999999999999999999   8999999999999999999999999999976543322 223


Q ss_pred             ccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhccCcCCHH
Q 048419          495 HIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYYDLA  574 (653)
Q Consensus       495 ~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~  574 (653)
                      ...||+.|+|||.+.+..++.++|||||||++|||++|+.||.........  .. +....        .... ...+..
T Consensus       156 ~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~--~~-~~~~~--------~~~~-~~~~~~  223 (280)
T cd05608         156 GYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVEN--KE-LKQRI--------LNDS-VTYPDK  223 (280)
T ss_pred             ccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhH--HH-HHHhh--------cccC-CCCccc
Confidence            356899999999999999999999999999999999999999754321110  00 00000        0000 011222


Q ss_pred             HHHHHHHHHHHcCCCCCCCCC-----CHHHHHHHH
Q 048419          575 EAELVLNLGLFCSAPNPVYRP-----DMRRVVEFL  604 (653)
Q Consensus       575 ~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~L  604 (653)
                      ....+.+++.+||+.||++||     ++.+++++-
T Consensus       224 ~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h~  258 (280)
T cd05608         224 FSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTHP  258 (280)
T ss_pred             CCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcCh
Confidence            356788999999999999999     778888753

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=100.00  E-value=8.2e-38  Score=334.97  Aligned_cols=265  Identities=22%  Similarity=0.234  Sum_probs=208.4

Q ss_pred             cCHHHHHHhhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC---chhhHHHHHHHHHHHhhcCCCceeeeeeee
Q 048419          320 FKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN---SQQGMKEFVAEIMSMGRLRHRNLVQLHGWC  396 (653)
Q Consensus       320 f~~~el~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~  396 (653)
                      -.+.++....++|...+.||+|+||.||++.+..+++.+|+|++...   .....+.+.+|+.+++.++||||+++++++
T Consensus        33 ~~~~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~  112 (371)
T cd05622          33 NKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAF  112 (371)
T ss_pred             hHHhhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEE
Confidence            34556666678999999999999999999999999999999998642   223345678899999999999999999999


Q ss_pred             cccceeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEE
Q 048419          397 RKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKL  476 (653)
Q Consensus       397 ~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl  476 (653)
                      .+.+.+++||||+++|+|.+++...      .++...+..++.||+.||.|||+   ++|+||||||+|||++.++.+||
T Consensus       113 ~~~~~~~lv~Ey~~gg~L~~~~~~~------~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDLkp~NIll~~~~~ikL  183 (371)
T cd05622         113 QDDRYLYMVMEYMPGGDLVNLMSNY------DVPEKWARFYTAEVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKL  183 (371)
T ss_pred             EcCCEEEEEEcCCCCCcHHHHHHhc------CCCHHHHHHHHHHHHHHHHHHHH---CCEEeCCCCHHHEEECCCCCEEE
Confidence            9999999999999999999998643      37788888999999999999999   99999999999999999999999


Q ss_pred             EeecCcccccCCCCCcccccccCCcccCccccccC----CCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHH
Q 048419          477 GDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTG----KATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVK  552 (653)
Q Consensus       477 ~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~  552 (653)
                      +|||+++..............||+.|+|||++...    .++.++|||||||++|||++|+.||........  . ..+.
T Consensus       184 ~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~--~-~~i~  260 (371)
T cd05622         184 ADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGT--Y-SKIM  260 (371)
T ss_pred             EeCCceeEcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHH--H-HHHH
Confidence            99999987643322233345799999999998654    378899999999999999999999986443211  1 1110


Q ss_pred             hhhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCC--CCCHHHHHHHHc
Q 048419          553 ELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVY--RPDMRRVVEFLL  605 (653)
Q Consensus       553 ~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~--RPs~~evl~~L~  605 (653)
                      .   ........      ........+.+++.+|+..++.+  ||++.|++++..
T Consensus       261 ~---~~~~~~~~------~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~~  306 (371)
T cd05622         261 N---HKNSLTFP------DDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLF  306 (371)
T ss_pred             c---CCCcccCC------CcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCcc
Confidence            0   00000000      00123456788999999844433  789999998764

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=100.00  E-value=6.2e-38  Score=331.17  Aligned_cols=255  Identities=24%  Similarity=0.302  Sum_probs=201.1

Q ss_pred             CcCcceeeeeeCcEEEEEEEeC---CCCcEEEEEEeccC----chhhHHHHHHHHHHHhhc-CCCceeeeeeeeccccee
Q 048419          331 GFGEQNLVGSGGFGRVYRGLMP---SLGLEVAIKRIGHN----SQQGMKEFVAEIMSMGRL-RHRNLVQLHGWCRKQDEL  402 (653)
Q Consensus       331 ~f~~~~~LG~G~fg~Vy~~~~~---~~~~~vavK~~~~~----~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~  402 (653)
                      +|+..+.||+|+||.||+++..   .++..||+|++...    .....+.+..|+.+++++ +|+||+++++++...+.+
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~   80 (332)
T cd05614           1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL   80 (332)
T ss_pred             CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence            4778899999999999998863   46889999998643    223345678899999999 599999999999999999


Q ss_pred             EEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCc
Q 048419          403 LLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLA  482 (653)
Q Consensus       403 ~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla  482 (653)
                      ++||||+++|+|.+++...     ..+++.++..++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||++
T Consensus        81 ~lv~e~~~~g~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~---~~ivHrDlkp~Nili~~~~~~kl~DfG~~  152 (332)
T cd05614          81 HLILDYVSGGEMFTHLYQR-----DNFSEDEVRFYSGEIILALEHLHK---LGIVYRDIKLENILLDSEGHVVLTDFGLS  152 (332)
T ss_pred             EEEEeCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCcEecCCCHHHeEECCCCCEEEeeCcCC
Confidence            9999999999999998654     348899999999999999999999   89999999999999999999999999999


Q ss_pred             ccccCCCCCcccccccCCcccCccccccC-CCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchh
Q 048419          483 KIYEHGANPQTTHIVGTLGYLAPELTRTG-KATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEIT  561 (653)
Q Consensus       483 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~  561 (653)
                      +..............||+.|+|||.+.+. .++.++|||||||++|||++|+.||..........   .+......    
T Consensus       153 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~---~~~~~~~~----  225 (332)
T cd05614         153 KEFLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQS---EVSRRILK----  225 (332)
T ss_pred             ccccccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHH---HHHHHHhc----
Confidence            86544333333445799999999998765 47889999999999999999999996432211100   00000000    


Q ss_pred             HhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCC-----CHHHHHHHHc
Q 048419          562 QAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRP-----DMRRVVEFLL  605 (653)
Q Consensus       562 ~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~L~  605 (653)
                        .++.   .+......+.+++.+||+.||.+||     ++.+++++-.
T Consensus       226 --~~~~---~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~  269 (332)
T cd05614         226 --CDPP---FPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPF  269 (332)
T ss_pred             --CCCC---CCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCC
Confidence              0011   1112245678999999999999999     7888887653

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=100.00  E-value=5.3e-38  Score=322.79  Aligned_cols=261  Identities=22%  Similarity=0.371  Sum_probs=205.5

Q ss_pred             hhcCcCcceeeeeeCcEEEEEEEeCC-----CCcEEEEEEeccC-chhhHHHHHHHHHHHhhcCCCceeeeeeeecccce
Q 048419          328 VTKGFGEQNLVGSGGFGRVYRGLMPS-----LGLEVAIKRIGHN-SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDE  401 (653)
Q Consensus       328 at~~f~~~~~LG~G~fg~Vy~~~~~~-----~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~  401 (653)
                      ++++|+..+.||+|+||.||+|.+.+     .+..||||++... ......++.+|+.++++++|+||+++++++.+.+.
T Consensus         4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~   83 (277)
T cd05062           4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP   83 (277)
T ss_pred             cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence            56789999999999999999998642     3567999998543 23345678999999999999999999999999999


Q ss_pred             eEEEEeccCCCCchhhhhccccc-----ccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEE
Q 048419          402 LLLVYDYVPNGSLDKLLFDKDHK-----LRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKL  476 (653)
Q Consensus       402 ~~lV~E~~~~gsL~~~l~~~~~~-----~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl  476 (653)
                      .++||||+++++|.+++......     ....+++.+++.++.|++.||.|||+   ++++|+||||+||++++++.+||
T Consensus        84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~~vH~dlkp~Nil~~~~~~~~l  160 (277)
T cd05062          84 TLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKI  160 (277)
T ss_pred             eEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCcchheEEEcCCCCEEE
Confidence            99999999999999998653221     02346788999999999999999999   89999999999999999999999


Q ss_pred             EeecCcccccCCCCC-cccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhh
Q 048419          477 GDFGLAKIYEHGANP-QTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKEL  554 (653)
Q Consensus       477 ~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~  554 (653)
                      +|||+++........ ......++..|+|||.+.+..++.++|||||||++|||++ |..||.......   ..+.+.  
T Consensus       161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~---~~~~~~--  235 (277)
T cd05062         161 GDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQ---VLRFVM--  235 (277)
T ss_pred             CCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH---HHHHHH--
Confidence            999998755332211 1122345778999999998889999999999999999999 688886543321   111111  


Q ss_pred             hcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          555 HLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       555 ~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                        .+..        ...+......+.+++.+||+.+|.+||++.|+++.|+.
T Consensus       236 --~~~~--------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~  277 (277)
T cd05062         236 --EGGL--------LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE  277 (277)
T ss_pred             --cCCc--------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence              1110        01111234578999999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=100.00  E-value=5.7e-38  Score=322.73  Aligned_cols=258  Identities=25%  Similarity=0.404  Sum_probs=207.8

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCC-----CCcEEEEEEeccCchh-hHHHHHHHHHHHhhcCCCceeeeeeeecccceeE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPS-----LGLEVAIKRIGHNSQQ-GMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELL  403 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~  403 (653)
                      ++|...+.||+|+||.||+|....     ++..||||.+...... ..+.+.+|++++++++|+||+++++++...+..+
T Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~   84 (280)
T cd05049           5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPI   84 (280)
T ss_pred             HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeE
Confidence            457778899999999999998743     3578999999765443 5678999999999999999999999999999999


Q ss_pred             EEEeccCCCCchhhhhcccc---------cccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcE
Q 048419          404 LVYDYVPNGSLDKLLFDKDH---------KLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNA  474 (653)
Q Consensus       404 lV~E~~~~gsL~~~l~~~~~---------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~  474 (653)
                      +||||+++++|.+++.....         .....+++.++..++.|++.||.|||+   ++++||||||+||+++.++.+
T Consensus        85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~---~~i~h~dlkp~nili~~~~~~  161 (280)
T cd05049          85 MVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLAS---QHFVHRDLATRNCLVGYDLVV  161 (280)
T ss_pred             EEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhh---CCeeccccccceEEEcCCCeE
Confidence            99999999999999976532         113458899999999999999999999   899999999999999999999


Q ss_pred             EEEeecCcccccCCCC-CcccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHH
Q 048419          475 KLGDFGLAKIYEHGAN-PQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVK  552 (653)
Q Consensus       475 kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~  552 (653)
                      ||+|||+++....... .......+++.|+|||.+.+..++.++|||||||++|||++ |+.||.......   ..+.+.
T Consensus       162 kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~---~~~~~~  238 (280)
T cd05049         162 KIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEE---VIECIT  238 (280)
T ss_pred             EECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHH---HHHHHH
Confidence            9999999975432211 11223345788999999999999999999999999999998 999987544322   111111


Q ss_pred             hhhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          553 ELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       553 ~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                          .+..        ..........+.+++.+||+.||.+||++.||++.|+
T Consensus       239 ----~~~~--------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~  279 (280)
T cd05049         239 ----QGRL--------LQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ  279 (280)
T ss_pred             ----cCCc--------CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence                1111        1111123467889999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=100.00  E-value=7.6e-38  Score=336.31  Aligned_cols=254  Identities=23%  Similarity=0.277  Sum_probs=199.6

Q ss_pred             CcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc---hhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEe
Q 048419          331 GFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS---QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYD  407 (653)
Q Consensus       331 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E  407 (653)
                      +|+..+.||+|+||.||+++...+++.||||++....   ....+.+.+|++++++++|+||+++++.+.+.+.+++|||
T Consensus         2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E   81 (376)
T cd05598           2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD   81 (376)
T ss_pred             CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEe
Confidence            6888999999999999999999899999999986432   2334668899999999999999999999999999999999


Q ss_pred             ccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccC
Q 048419          408 YVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEH  487 (653)
Q Consensus       408 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~  487 (653)
                      |+++|+|.+++...     ..+++.....++.||+.||+|||+   ++|+||||||+|||++.++.+||+|||++..+..
T Consensus        82 ~~~~g~L~~~i~~~-----~~~~~~~~~~~~~qi~~al~~lH~---~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~  153 (376)
T cd05598          82 YIPGGDMMSLLIRL-----GIFEEDLARFYIAELTCAIESVHK---MGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRW  153 (376)
T ss_pred             CCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCCHHHEEECCCCCEEEEeCCCCccccc
Confidence            99999999999654     347888888999999999999999   8999999999999999999999999999753210


Q ss_pred             CC------------------------------------------CCcccccccCCcccCccccccCCCCCccceeehHHH
Q 048419          488 GA------------------------------------------NPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGIL  525 (653)
Q Consensus       488 ~~------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvv  525 (653)
                      ..                                          ........||+.|+|||++.+..++.++|||||||+
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvi  233 (376)
T cd05598         154 THDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVI  233 (376)
T ss_pred             cccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccce
Confidence            00                                          000113469999999999999899999999999999


Q ss_pred             HHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCC---CHHHHHH
Q 048419          526 MLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRP---DMRRVVE  602 (653)
Q Consensus       526 l~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RP---s~~evl~  602 (653)
                      +|||++|+.||..........   .+...  ....   ..+.    .......+.+++.+|+ .+|.+|+   ++.|+++
T Consensus       234 lyell~G~~Pf~~~~~~~~~~---~i~~~--~~~~---~~~~----~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~  300 (376)
T cd05598         234 LYEMLVGQPPFLADTPAETQL---KVINW--ETTL---HIPS----QAKLSREASDLILRLC-CGAEDRLGKNGADEIKA  300 (376)
T ss_pred             eeehhhCCCCCCCCCHHHHHH---HHhcc--Cccc---cCCC----CCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhC
Confidence            999999999998654322111   00000  0000   0000    0112345666777765 4999999   8999998


Q ss_pred             HHc
Q 048419          603 FLL  605 (653)
Q Consensus       603 ~L~  605 (653)
                      +-.
T Consensus       301 h~~  303 (376)
T cd05598         301 HPF  303 (376)
T ss_pred             CCC
Confidence            743

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=100.00  E-value=3.5e-38  Score=332.11  Aligned_cols=245  Identities=25%  Similarity=0.312  Sum_probs=199.3

Q ss_pred             eeeeeeCcEEEEEEEeCCCCcEEEEEEeccC---chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEeccCCC
Q 048419          336 NLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN---SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNG  412 (653)
Q Consensus       336 ~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~g  412 (653)
                      +.||+|+||.||++....++..||+|.+...   .......+..|+++++.++|+||+++++++...+..++||||+++|
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~   80 (325)
T cd05594           1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG   80 (325)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence            4699999999999999888999999999653   2334567788999999999999999999999999999999999999


Q ss_pred             CchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCCCCc
Q 048419          413 SLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQ  492 (653)
Q Consensus       413 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~  492 (653)
                      +|..++...     ..+++.++..++.||+.||.|||+.  ++|+||||||+|||++.++.+||+|||+++...... ..
T Consensus        81 ~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~lH~~--~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~-~~  152 (325)
T cd05594          81 ELFFHLSRE-----RVFSEDRARFYGAEIVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG-AT  152 (325)
T ss_pred             cHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhc--CCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCC-cc
Confidence            999888653     3489999999999999999999962  699999999999999999999999999987532221 12


Q ss_pred             ccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhccCcCC
Q 048419          493 TTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYYD  572 (653)
Q Consensus       493 ~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~  572 (653)
                      .....||+.|+|||++.+..++.++|||||||++|||++|+.||........   ...+...  ..           ..+
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~---~~~i~~~--~~-----------~~p  216 (325)
T cd05594         153 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKL---FELILME--EI-----------RFP  216 (325)
T ss_pred             cccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHH---HHHHhcC--CC-----------CCC
Confidence            2335689999999999988999999999999999999999999976443211   1111000  00           011


Q ss_pred             HHHHHHHHHHHHHcCCCCCCCCC-----CHHHHHHHH
Q 048419          573 LAEAELVLNLGLFCSAPNPVYRP-----DMRRVVEFL  604 (653)
Q Consensus       573 ~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~L  604 (653)
                      ......+.+++.+||+.||.+|+     ++.+++++.
T Consensus       217 ~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~  253 (325)
T cd05594         217 RTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHK  253 (325)
T ss_pred             CCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcCC
Confidence            11245678999999999999996     899998764

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=100.00  E-value=7.6e-38  Score=323.67  Aligned_cols=259  Identities=26%  Similarity=0.419  Sum_probs=207.4

Q ss_pred             cCcCcceeeeeeCcEEEEEEEe-----CCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLM-----PSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLL  404 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~-----~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  404 (653)
                      ++|...+.||+|+||.||++..     ..++..+|+|.+........+.+.+|++++++++|+||+++++++...+..++
T Consensus         5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   84 (288)
T cd05093           5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM   84 (288)
T ss_pred             HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEE
Confidence            4677889999999999999985     23456799999977666667789999999999999999999999999999999


Q ss_pred             EEeccCCCCchhhhhcccc--------cccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEE
Q 048419          405 VYDYVPNGSLDKLLFDKDH--------KLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKL  476 (653)
Q Consensus       405 V~E~~~~gsL~~~l~~~~~--------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl  476 (653)
                      ||||+++++|.+++.....        .....+++.+++.++.|++.||+|||+   ++++||||||+||++++++.+||
T Consensus        85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~---~~i~H~dlkp~Nili~~~~~~kl  161 (288)
T cd05093          85 VFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLAS---QHFVHRDLATRNCLVGENLLVKI  161 (288)
T ss_pred             EEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccCcceEEEccCCcEEe
Confidence            9999999999999975431        112358999999999999999999999   89999999999999999999999


Q ss_pred             EeecCcccccCCCC-CcccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhh
Q 048419          477 GDFGLAKIYEHGAN-PQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKEL  554 (653)
Q Consensus       477 ~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~  554 (653)
                      +|||+++....... .......++..|+|||.+.+..++.++|||||||+++||++ |..||.......   ..+.+.  
T Consensus       162 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~---~~~~i~--  236 (288)
T cd05093         162 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE---VIECIT--  236 (288)
T ss_pred             ccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH---HHHHHH--
Confidence            99999986533221 11122345778999999988889999999999999999998 888886543321   111111  


Q ss_pred             hcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          555 HLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       555 ~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                        .+....     .   .......+.+++.+||+.+|.+|||+.++++.|+.
T Consensus       237 --~~~~~~-----~---~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~  278 (288)
T cd05093         237 --QGRVLQ-----R---PRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQN  278 (288)
T ss_pred             --cCCcCC-----C---CCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHH
Confidence              111100     0   11123568999999999999999999999998865

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=100.00  E-value=7e-38  Score=324.43  Aligned_cols=261  Identities=24%  Similarity=0.405  Sum_probs=209.7

Q ss_pred             CcCcceeeeeeCcEEEEEEEeC-----CCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEE
Q 048419          331 GFGEQNLVGSGGFGRVYRGLMP-----SLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLV  405 (653)
Q Consensus       331 ~f~~~~~LG~G~fg~Vy~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV  405 (653)
                      +|...+.||+|+||.||+|...     .++..+++|.+........+.+.+|++.+++++|+||+++++++...+..++|
T Consensus         6 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   85 (291)
T cd05094           6 DIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMV   85 (291)
T ss_pred             HeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEEE
Confidence            4677889999999999999853     23567999998776666667899999999999999999999999999999999


Q ss_pred             EeccCCCCchhhhhcccc-----------cccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcE
Q 048419          406 YDYVPNGSLDKLLFDKDH-----------KLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNA  474 (653)
Q Consensus       406 ~E~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~  474 (653)
                      |||+++++|.+++.....           .....+++.+++.++.||+.||+|||+   ++++||||||+||+++.++.+
T Consensus        86 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~---~~i~H~dlkp~Nil~~~~~~~  162 (291)
T cd05094          86 FEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLAS---QHFVHRDLATRNCLVGANLLV  162 (291)
T ss_pred             EecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccCcceEEEccCCcE
Confidence            999999999999976431           112348999999999999999999999   999999999999999999999


Q ss_pred             EEEeecCcccccCCCC-CcccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHH
Q 048419          475 KLGDFGLAKIYEHGAN-PQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVK  552 (653)
Q Consensus       475 kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~  552 (653)
                      ||+|||++........ .......++..|+|||.+.+..++.++|||||||++|||+| |+.||.......   ..+.+.
T Consensus       163 ~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~---~~~~~~  239 (291)
T cd05094         163 KIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTE---VIECIT  239 (291)
T ss_pred             EECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH---HHHHHh
Confidence            9999999976543221 11223456788999999998899999999999999999999 999986544322   111111


Q ss_pred             hhhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcCCCC
Q 048419          553 ELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLGDSS  609 (653)
Q Consensus       553 ~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  609 (653)
                          .+...        ......+..+.+++.+||+.+|.+||++.+|+++|+....
T Consensus       240 ----~~~~~--------~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~  284 (291)
T cd05094         240 ----QGRVL--------ERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGK  284 (291)
T ss_pred             ----CCCCC--------CCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHh
Confidence                11111        1111234678899999999999999999999999976533

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=100.00  E-value=8.8e-38  Score=332.89  Aligned_cols=251  Identities=24%  Similarity=0.341  Sum_probs=196.5

Q ss_pred             cCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc-hhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEeccC
Q 048419          332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS-QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVP  410 (653)
Q Consensus       332 f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~  410 (653)
                      |+..+.||+|+||.||+|.+..+++.||||++.... ....+.+.+|++++++++|+||+++++++...+.+++||||++
T Consensus        76 ~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~  155 (353)
T PLN00034         76 LERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFMD  155 (353)
T ss_pred             HhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEecCC
Confidence            344678999999999999998889999999986543 3345678999999999999999999999999999999999999


Q ss_pred             CCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCCC
Q 048419          411 NGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGAN  490 (653)
Q Consensus       411 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~  490 (653)
                      +++|....         .+.+..+..++.||+.||.|||+   ++|+||||||+|||+++++.+||+|||+++.......
T Consensus       156 ~~~L~~~~---------~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~  223 (353)
T PLN00034        156 GGSLEGTH---------IADEQFLADVARQILSGIAYLHR---RHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMD  223 (353)
T ss_pred             CCcccccc---------cCCHHHHHHHHHHHHHHHHHHHH---CCEeecCCCHHHEEEcCCCCEEEcccccceecccccc
Confidence            99986532         24566778899999999999999   8999999999999999999999999999987643221


Q ss_pred             CcccccccCCcccCcccccc-----CCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhh
Q 048419          491 PQTTHIVGTLGYLAPELTRT-----GKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAID  565 (653)
Q Consensus       491 ~~~~~~~gt~~y~aPE~~~~-----~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d  565 (653)
                       ......||..|+|||.+..     ...+.++|||||||++|||++|+.||......+...+...+..    .       
T Consensus       224 -~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~----~-------  291 (353)
T PLN00034        224 -PCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICM----S-------  291 (353)
T ss_pred             -cccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhc----c-------
Confidence             2233578999999998753     2345689999999999999999999974322111111100000    0       


Q ss_pred             hccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcCC
Q 048419          566 QTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLGD  607 (653)
Q Consensus       566 ~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  607 (653)
                       ............+.+++.+||+.||++||++.|++++-.-.
T Consensus       292 -~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~hp~~~  332 (353)
T PLN00034        292 -QPPEAPATASREFRHFISCCLQREPAKRWSAMQLLQHPFIL  332 (353)
T ss_pred             -CCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcCcccc
Confidence             00011122346788999999999999999999999875433

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=100.00  E-value=1.1e-37  Score=315.61  Aligned_cols=248  Identities=23%  Similarity=0.341  Sum_probs=199.3

Q ss_pred             eeeeeeCcEEEEEEEeCCCCcEEEEEEeccC-chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEeccCCCCc
Q 048419          336 NLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN-SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSL  414 (653)
Q Consensus       336 ~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL  414 (653)
                      +.||+|+||.||+|.+..+++.+|+|.+... ..+....+.+|++++++++|+||++++++|...+..++||||+++++|
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (252)
T cd05084           1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF   80 (252)
T ss_pred             CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence            3699999999999999888999999988644 344557799999999999999999999999999999999999999999


Q ss_pred             hhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCCCCcc-
Q 048419          415 DKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQT-  493 (653)
Q Consensus       415 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~-  493 (653)
                      .+++....    ..+++.+++.++.|++.||.|||+   ++++|+||||+||+++.++.+||+|||++........... 
T Consensus        81 ~~~~~~~~----~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~  153 (252)
T cd05084          81 LTFLRTEG----PRLKVKELIQMVENAAAGMEYLES---KHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTG  153 (252)
T ss_pred             HHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHHh---CCccccccchheEEEcCCCcEEECccccCcccccccccccC
Confidence            99986532    347899999999999999999999   8999999999999999999999999999875433211111 


Q ss_pred             cccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhccCcCC
Q 048419          494 THIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYYD  572 (653)
Q Consensus       494 ~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~  572 (653)
                      .....+..|+|||.+.+..++.++|||||||++|||++ |..|+.........   ..+...   ..         ....
T Consensus       154 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~---~~~~~~---~~---------~~~~  218 (252)
T cd05084         154 GMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTR---EAIEQG---VR---------LPCP  218 (252)
T ss_pred             CCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHH---HHHHcC---CC---------CCCc
Confidence            11123457999999998889999999999999999998 88888654332111   111100   00         0111


Q ss_pred             HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          573 LAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       573 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                      ......+.+++.+||+.+|++||++.+|++.|.
T Consensus       219 ~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~  251 (252)
T cd05084         219 ELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQ  251 (252)
T ss_pred             ccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence            223467889999999999999999999999885

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=100.00  E-value=8.9e-38  Score=328.85  Aligned_cols=248  Identities=23%  Similarity=0.316  Sum_probs=200.1

Q ss_pred             CcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC---chhhHHHHHHHHHHHhhcCCC-ceeeeeeeecccceeEEEE
Q 048419          331 GFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN---SQQGMKEFVAEIMSMGRLRHR-NLVQLHGWCRKQDELLLVY  406 (653)
Q Consensus       331 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~-niv~l~g~~~~~~~~~lV~  406 (653)
                      +|+..+.||+|+||.||+|....+++.||||++...   .....+.+..|.+++..++|+ +|+++++++...+.+++||
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (324)
T cd05587           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM   80 (324)
T ss_pred             CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence            477889999999999999999988999999998653   234456788899999999765 5888999999999999999


Q ss_pred             eccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccccc
Q 048419          407 DYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE  486 (653)
Q Consensus       407 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~  486 (653)
                      ||+++|+|.+++....     .+++.++..++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+++...
T Consensus        81 E~~~~g~L~~~~~~~~-----~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~  152 (324)
T cd05587          81 EYVNGGDLMYHIQQVG-----KFKEPHAVFYAAEIAIGLFFLHS---KGIIYRDLKLDNVMLDAEGHIKIADFGMCKENI  152 (324)
T ss_pred             cCCCCCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHeEEcCCCCEEEeecCcceecC
Confidence            9999999999886543     47889999999999999999999   899999999999999999999999999987432


Q ss_pred             CCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhh
Q 048419          487 HGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQ  566 (653)
Q Consensus       487 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  566 (653)
                      ... .......||+.|+|||++.+..++.++|||||||++|||++|+.||........   ...+..    ..       
T Consensus       153 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~---~~~i~~----~~-------  217 (324)
T cd05587         153 FGG-KTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDEL---FQSIME----HN-------  217 (324)
T ss_pred             CCC-CceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHH---HHHHHc----CC-------
Confidence            211 122345689999999999998899999999999999999999999976543211   111111    00       


Q ss_pred             ccCcCCHHHHHHHHHHHHHcCCCCCCCCCCH-----HHHHHH
Q 048419          567 TLDYYDLAEAELVLNLGLFCSAPNPVYRPDM-----RRVVEF  603 (653)
Q Consensus       567 ~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~-----~evl~~  603 (653)
                        ..++......+.+++.+||+.||.+||+.     .+++++
T Consensus       218 --~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h  257 (324)
T cd05587         218 --VSYPKSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREH  257 (324)
T ss_pred             --CCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence              01111224567899999999999999976     666654

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=100.00  E-value=7.9e-38  Score=328.82  Aligned_cols=244  Identities=24%  Similarity=0.348  Sum_probs=198.4

Q ss_pred             eeeeeeCcEEEEEEEeCCCCcEEEEEEeccC---chhhHHHHHHHHHHHhhc-CCCceeeeeeeecccceeEEEEeccCC
Q 048419          336 NLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN---SQQGMKEFVAEIMSMGRL-RHRNLVQLHGWCRKQDELLLVYDYVPN  411 (653)
Q Consensus       336 ~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~E~~~~  411 (653)
                      ++||+|+||.||+|+...+++.||||++...   .....+.+..|.+++..+ +||||+++++++...+.+++||||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~   80 (321)
T cd05591           1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG   80 (321)
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence            3699999999999999988999999998653   233456677888888876 799999999999999999999999999


Q ss_pred             CCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCCCC
Q 048419          412 GSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANP  491 (653)
Q Consensus       412 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~  491 (653)
                      |+|..++...     ..+++..+..++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+++...... .
T Consensus        81 ~~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~-~  151 (321)
T cd05591          81 GDLMFQIQRS-----RKFDEPRSRFYAAEVTLALMFLHR---HGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNG-V  151 (321)
T ss_pred             CcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEEeecccceecccCC-c
Confidence            9999888653     348889999999999999999999   899999999999999999999999999987543221 2


Q ss_pred             cccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhccCcC
Q 048419          492 QTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYY  571 (653)
Q Consensus       492 ~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~  571 (653)
                      ......||+.|+|||++.+..++.++|||||||++|||++|+.||.......   +.+.+.    .+..         ..
T Consensus       152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~---~~~~i~----~~~~---------~~  215 (321)
T cd05591         152 TTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDD---LFESIL----HDDV---------LY  215 (321)
T ss_pred             cccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHH---HHHHHH----cCCC---------CC
Confidence            2234568999999999998899999999999999999999999998654322   111111    0000         01


Q ss_pred             CHHHHHHHHHHHHHcCCCCCCCCC-------CHHHHHHHH
Q 048419          572 DLAEAELVLNLGLFCSAPNPVYRP-------DMRRVVEFL  604 (653)
Q Consensus       572 ~~~~~~~l~~l~~~Cl~~dP~~RP-------s~~evl~~L  604 (653)
                      +......+.+++..||+.||.+||       ++.+++++-
T Consensus       216 p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp  255 (321)
T cd05591         216 PVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHP  255 (321)
T ss_pred             CCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCC
Confidence            111235678999999999999999       888888764

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=100.00  E-value=1.3e-37  Score=324.47  Aligned_cols=269  Identities=22%  Similarity=0.270  Sum_probs=202.7

Q ss_pred             hcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCch-hhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEe
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQ-QGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYD  407 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E  407 (653)
                      .++|...+.||+|+||.||+|....+++.||||++..... .....+.+|+.++++++||||+++++++.+.+..++|||
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   83 (303)
T cd07869           4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE   83 (303)
T ss_pred             cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence            3678899999999999999999988899999999865432 233467789999999999999999999999999999999


Q ss_pred             ccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccC
Q 048419          408 YVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEH  487 (653)
Q Consensus       408 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~  487 (653)
                      |++ ++|.+++....    ..+++..+..++.|++.||+|||+   ++|+||||||+|||++.++.+||+|||+++....
T Consensus        84 ~~~-~~l~~~~~~~~----~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~  155 (303)
T cd07869          84 YVH-TDLCQYMDKHP----GGLHPENVKLFLFQLLRGLSYIHQ---RYILHRDLKPQNLLISDTGELKLADFGLARAKSV  155 (303)
T ss_pred             CCC-cCHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEECCCCcceeccC
Confidence            995 68888776542    347888999999999999999999   9999999999999999999999999999875432


Q ss_pred             CCCCcccccccCCcccCcccccc-CCCCCccceeehHHHHHHHHhCCCCCChhhhhhHH-HHHHHHHhhhcccch-----
Q 048419          488 GANPQTTHIVGTLGYLAPELTRT-GKATTSTDVYSYGILMLEVACGRRSIEPQKAAAEL-LLVDWVKELHLEGEI-----  560 (653)
Q Consensus       488 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~-~l~~~~~~~~~~~~~-----  560 (653)
                      .. .......+++.|+|||.+.+ ..++.++||||+||++|||++|+.||......... ...............     
T Consensus       156 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (303)
T cd07869         156 PS-HTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHS  234 (303)
T ss_pred             CC-ccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhh
Confidence            21 12233467899999998865 45788999999999999999999999764332111 000000000000000     


Q ss_pred             -hHhhhhccC---cCCH-------HHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          561 -TQAIDQTLD---YYDL-------AEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       561 -~~~~d~~l~---~~~~-------~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                       .........   ....       .....+.+++.+||+.||.+|||+.|++++-..
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f  291 (303)
T cd07869         235 LPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHEYF  291 (303)
T ss_pred             ccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcCccc
Confidence             000000000   0000       012467899999999999999999999976544

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=100.00  E-value=7e-38  Score=343.52  Aligned_cols=253  Identities=24%  Similarity=0.319  Sum_probs=206.5

Q ss_pred             CcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcC-CCceeeeeeee-cc---c---cee
Q 048419          331 GFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLR-HRNLVQLHGWC-RK---Q---DEL  402 (653)
Q Consensus       331 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~-~~---~---~~~  402 (653)
                      +.++.+.|.+|||+.||.|.+...|..||+|++-..++...+...+|+++|++|+ |+|||.+++.. ..   .   -++
T Consensus        38 ~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~Ev  117 (738)
T KOG1989|consen   38 RVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWEV  117 (738)
T ss_pred             EEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeEE
Confidence            3456889999999999999998877999999998778889999999999999997 99999999932 21   1   267


Q ss_pred             EEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCc
Q 048419          403 LLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLA  482 (653)
Q Consensus       403 ~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla  482 (653)
                      +|.||||++|.|-+++..+..   ..|++.++++|+.++++|+++||. +..+|||||||-+||||..+++.||||||.|
T Consensus       118 llLmEyC~gg~Lvd~mn~Rlq---~~lte~eVLkIf~dv~~AVa~mH~-~~pPiIHRDLKiENvLls~~g~~KLCDFGSa  193 (738)
T KOG1989|consen  118 LLLMEYCKGGSLVDFMNTRLQ---TRLTEDEVLKIFYDVCEAVAAMHY-LKPPIIHRDLKIENVLLSADGNYKLCDFGSA  193 (738)
T ss_pred             EeehhhccCCcHHHHHHHHHh---ccCChHHHHHHHHHHHHHHHHHhc-CCCccchhhhhhhheEEcCCCCEEeCccccc
Confidence            899999999999999987653   449999999999999999999998 4567999999999999999999999999999


Q ss_pred             ccccCCCCCc--------ccccccCCcccCcccc---ccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHH
Q 048419          483 KIYEHGANPQ--------TTHIVGTLGYLAPELT---RTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWV  551 (653)
Q Consensus       483 ~~~~~~~~~~--------~~~~~gt~~y~aPE~~---~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~  551 (653)
                      ...-......        .-...-|+.|+|||.+   .+...++|+|||+|||+||-||....||+......        
T Consensus       194 tt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~la--------  265 (738)
T KOG1989|consen  194 TTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKLA--------  265 (738)
T ss_pred             ccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCccee--------
Confidence            8543322110        0112458999999976   46678999999999999999999999998653211        


Q ss_pred             HhhhcccchhHhhhhccCcC-CHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          552 KELHLEGEITQAIDQTLDYY-DLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       552 ~~~~~~~~~~~~~d~~l~~~-~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                                 ++.-.-... ...+..++.+||..||++||.+||++.||+..+-.
T Consensus       266 -----------Ilng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~  310 (738)
T KOG1989|consen  266 -----------ILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFE  310 (738)
T ss_pred             -----------EEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHH
Confidence                       011000000 13567889999999999999999999999987743

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=100.00  E-value=7.2e-38  Score=330.17  Aligned_cols=250  Identities=23%  Similarity=0.303  Sum_probs=197.5

Q ss_pred             eeeeeeCcEEEEEEEeCCCCcEEEEEEeccC---chhhHHHHHHHHHHHhhc-CCCceeeeeeeecccceeEEEEeccCC
Q 048419          336 NLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN---SQQGMKEFVAEIMSMGRL-RHRNLVQLHGWCRKQDELLLVYDYVPN  411 (653)
Q Consensus       336 ~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~E~~~~  411 (653)
                      +.||+|+||.||++....+++.||+|++...   .....+.+..|+.++.++ +||||+++++++...+..++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~   80 (329)
T cd05618           1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG   80 (329)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence            4699999999999999999999999999753   334456678899888877 799999999999999999999999999


Q ss_pred             CCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCCCC
Q 048419          412 GSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANP  491 (653)
Q Consensus       412 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~  491 (653)
                      |+|..++...     ..+++..+..++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+++..... ..
T Consensus        81 ~~L~~~~~~~-----~~l~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~-~~  151 (329)
T cd05618          81 GDLMFHMQRQ-----RKLPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP-GD  151 (329)
T ss_pred             CCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEECCCCCEEEeeCCccccccCC-CC
Confidence            9998888653     348899999999999999999999   89999999999999999999999999998753221 12


Q ss_pred             cccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhh--HHHHHHHHHhhhcccchhHhhhhccC
Q 048419          492 QTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAA--ELLLVDWVKELHLEGEITQAIDQTLD  569 (653)
Q Consensus       492 ~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~d~~l~  569 (653)
                      ......||..|+|||++.+..++.++|||||||++|||++|+.||.......  .....+++........         .
T Consensus       152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~---------~  222 (329)
T cd05618         152 TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ---------I  222 (329)
T ss_pred             ccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCC---------C
Confidence            2234578999999999999999999999999999999999999996321110  0001111111111110         0


Q ss_pred             cCCHHHHHHHHHHHHHcCCCCCCCCCC------HHHHHHH
Q 048419          570 YYDLAEAELVLNLGLFCSAPNPVYRPD------MRRVVEF  603 (653)
Q Consensus       570 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs------~~evl~~  603 (653)
                      ..+......+.+++.+||+.||.+||+      +.+++++
T Consensus       223 ~~p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~h  262 (329)
T cd05618         223 RIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH  262 (329)
T ss_pred             CCCCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcC
Confidence            111223456789999999999999998      5677665

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=100.00  E-value=1.8e-37  Score=325.73  Aligned_cols=243  Identities=24%  Similarity=0.334  Sum_probs=198.4

Q ss_pred             eeeeeeCcEEEEEEEeCCCCcEEEEEEeccC---chhhHHHHHHHHHHHhhc-CCCceeeeeeeecccceeEEEEeccCC
Q 048419          336 NLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN---SQQGMKEFVAEIMSMGRL-RHRNLVQLHGWCRKQDELLLVYDYVPN  411 (653)
Q Consensus       336 ~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~E~~~~  411 (653)
                      +.||+|+||.||+|.+..+++.||||++...   .....+.+..|.+++..+ +||||+++++++...+.+++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~   80 (318)
T cd05570           1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG   80 (318)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            4699999999999999988999999999653   233456677898998888 699999999999999999999999999


Q ss_pred             CCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCCCC
Q 048419          412 GSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANP  491 (653)
Q Consensus       412 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~  491 (653)
                      |+|..++...     ..+++.++..++.|++.||.|||+   ++|+||||||+||++++++.+||+|||+++...... .
T Consensus        81 ~~L~~~~~~~-----~~l~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-~  151 (318)
T cd05570          81 GDLMFHIQRS-----GRFDEPRARFYAAEIVLGLQFLHE---RGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGG-V  151 (318)
T ss_pred             CCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCeEccCCCHHHeEECCCCcEEecccCCCeecCcCC-C
Confidence            9999888654     248999999999999999999999   999999999999999999999999999987532211 1


Q ss_pred             cccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhccCcC
Q 048419          492 QTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYY  571 (653)
Q Consensus       492 ~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~  571 (653)
                      ......|++.|+|||++.+..++.++|||||||++|||++|+.||.......   +...+..    ..        . ..
T Consensus       152 ~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~---~~~~i~~----~~--------~-~~  215 (318)
T cd05570         152 TTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDE---LFQSILE----DE--------V-RY  215 (318)
T ss_pred             cccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHH---HHHHHHc----CC--------C-CC
Confidence            2233568999999999999999999999999999999999999997544321   1111110    00        0 01


Q ss_pred             CHHHHHHHHHHHHHcCCCCCCCCCCH-----HHHHHH
Q 048419          572 DLAEAELVLNLGLFCSAPNPVYRPDM-----RRVVEF  603 (653)
Q Consensus       572 ~~~~~~~l~~l~~~Cl~~dP~~RPs~-----~evl~~  603 (653)
                      +......+.+++.+||+.||.+||++     .+++++
T Consensus       216 ~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~  252 (318)
T cd05570         216 PRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGH  252 (318)
T ss_pred             CCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcC
Confidence            11234568899999999999999999     888875

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=100.00  E-value=8.1e-38  Score=317.75  Aligned_cols=252  Identities=27%  Similarity=0.398  Sum_probs=202.3

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEecc
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYV  409 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~  409 (653)
                      ++|...+.||+|+||.||+|...+ +..+|||.+..... ..+.+.+|+..+++++||||++++++|...+..++||||+
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~-~~~~aik~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   81 (256)
T cd05113           4 KDLTFLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSM-SEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYM   81 (256)
T ss_pred             HHeEEeeEecCcccceEEEEEecC-CCcEEEEEcCCCcc-cHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcC
Confidence            346778899999999999998764 55699999865432 3467899999999999999999999999988999999999


Q ss_pred             CCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCC
Q 048419          410 PNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGA  489 (653)
Q Consensus       410 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~  489 (653)
                      ++|+|.+++....    ..+++.++++++.||+.||.|||+   ++++|+||||+||+++.++.+||+|||+++......
T Consensus        82 ~~~~l~~~i~~~~----~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~  154 (256)
T cd05113          82 SNGCLLNYLREHG----KRFQPSQLLEMCKDVCEGMAYLES---KQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDE  154 (256)
T ss_pred             CCCcHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHh---CCeeccccCcceEEEcCCCCEEECCCccceecCCCc
Confidence            9999999986543    258999999999999999999999   899999999999999999999999999988654332


Q ss_pred             CCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhcc
Q 048419          490 NPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTL  568 (653)
Q Consensus       490 ~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l  568 (653)
                      ........++..|+|||.+.+..++.++|||||||++|||++ |+.||.......   ..+.+..    +..        
T Consensus       155 ~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~---~~~~~~~----~~~--------  219 (256)
T cd05113         155 YTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSE---TVEKVSQ----GLR--------  219 (256)
T ss_pred             eeecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH---HHHHHhc----CCC--------
Confidence            222222345678999999988889999999999999999999 999987543321   1111111    100        


Q ss_pred             CcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          569 DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       569 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                      ..........+.+++.+||+.+|.+||++.++++.|+
T Consensus       220 ~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~  256 (256)
T cd05113         220 LYRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE  256 (256)
T ss_pred             CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence            0001112467899999999999999999999998874

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=1.3e-37  Score=327.56  Aligned_cols=244  Identities=27%  Similarity=0.351  Sum_probs=196.9

Q ss_pred             eeeeeeCcEEEEEEEeC---CCCcEEEEEEeccC----chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEec
Q 048419          336 NLVGSGGFGRVYRGLMP---SLGLEVAIKRIGHN----SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDY  408 (653)
Q Consensus       336 ~~LG~G~fg~Vy~~~~~---~~~~~vavK~~~~~----~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~  408 (653)
                      +.||+|+||.||+++..   ..++.||||++...    .......+.+|+.++++++||||+++++++..++..++||||
T Consensus         2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~   81 (323)
T cd05584           2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY   81 (323)
T ss_pred             ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence            57999999999999863   46789999998643    223345678899999999999999999999999999999999


Q ss_pred             cCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCC
Q 048419          409 VPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHG  488 (653)
Q Consensus       409 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~  488 (653)
                      +++++|.+++...     ..+++..+..++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+++.....
T Consensus        82 ~~~~~L~~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~  153 (323)
T cd05584          82 LSGGELFMHLERE-----GIFMEDTACFYLSEISLALEHLHQ---QGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHE  153 (323)
T ss_pred             CCCchHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCCEEEeeCcCCeecccC
Confidence            9999999998654     347788888999999999999999   99999999999999999999999999998754322


Q ss_pred             CCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhcc
Q 048419          489 ANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTL  568 (653)
Q Consensus       489 ~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l  568 (653)
                      . .......||+.|+|||++.+..++.++|||||||++|||++|+.||........   ...+.    .+.        +
T Consensus       154 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~---~~~~~----~~~--------~  217 (323)
T cd05584         154 G-TVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKT---IDKIL----KGK--------L  217 (323)
T ss_pred             C-CcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHH---HHHHH----cCC--------C
Confidence            1 122335689999999999988899999999999999999999999976543211   01000    110        0


Q ss_pred             CcCCHHHHHHHHHHHHHcCCCCCCCCC-----CHHHHHHHH
Q 048419          569 DYYDLAEAELVLNLGLFCSAPNPVYRP-----DMRRVVEFL  604 (653)
Q Consensus       569 ~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~L  604 (653)
                       ..+......+.+++.+||+.+|.+||     ++.+++++-
T Consensus       218 -~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~  257 (323)
T cd05584         218 -NLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHP  257 (323)
T ss_pred             -CCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcCC
Confidence             01112245688999999999999999     899988754

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=100.00  E-value=2.2e-37  Score=333.46  Aligned_cols=252  Identities=22%  Similarity=0.294  Sum_probs=196.6

Q ss_pred             CcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc---hhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEe
Q 048419          331 GFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS---QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYD  407 (653)
Q Consensus       331 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E  407 (653)
                      +|...+.||+|+||.||+|....+++.||+|++....   ....+.+.+|+.++++++|+||+++++.+.+.+.+++|||
T Consensus         2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E   81 (382)
T cd05625           2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD   81 (382)
T ss_pred             CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence            5788999999999999999999899999999986532   3345678899999999999999999999999999999999


Q ss_pred             ccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccC
Q 048419          408 YVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEH  487 (653)
Q Consensus       408 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~  487 (653)
                      ||++|+|.+++...     ..+++.....++.||+.||+|||+   ++|+||||||+|||++.++.+||+|||+++.+..
T Consensus        82 ~~~gg~L~~~l~~~-----~~~~e~~~~~~~~qi~~al~~lH~---~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~  153 (382)
T cd05625          82 YIPGGDMMSLLIRM-----GIFPEDLARFYIAELTCAVESVHK---MGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRW  153 (382)
T ss_pred             CCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEEeECCCCccccc
Confidence            99999999998654     247888889999999999999999   8999999999999999999999999999753210


Q ss_pred             CC----------------------------------------------CCcccccccCCcccCccccccCCCCCccceee
Q 048419          488 GA----------------------------------------------NPQTTHIVGTLGYLAPELTRTGKATTSTDVYS  521 (653)
Q Consensus       488 ~~----------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s  521 (653)
                      ..                                              ........||+.|+|||++.+..++.++||||
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwS  233 (382)
T cd05625         154 THDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWS  233 (382)
T ss_pred             cccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEe
Confidence            00                                              00011246899999999999889999999999


Q ss_pred             hHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCC---HH
Q 048419          522 YGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPD---MR  598 (653)
Q Consensus       522 ~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs---~~  598 (653)
                      |||++|||++|+.||..........  ... ..  .....   .+.    .......+.+++.+|+ .+|.+|++   +.
T Consensus       234 lGvil~elltG~~Pf~~~~~~~~~~--~i~-~~--~~~~~---~p~----~~~~s~~~~~li~~l~-~~p~~R~~~~~~~  300 (382)
T cd05625         234 VGVILYEMLVGQPPFLAQTPLETQM--KVI-NW--QTSLH---IPP----QAKLSPEASDLIIKLC-RGPEDRLGKNGAD  300 (382)
T ss_pred             chHHHHHHHhCCCCCCCCCHHHHHH--HHH-cc--CCCcC---CCC----cccCCHHHHHHHHHHc-cCHhHcCCCCCHH
Confidence            9999999999999998654322111  000 00  00000   000    0111244556666655 49999997   88


Q ss_pred             HHHHH
Q 048419          599 RVVEF  603 (653)
Q Consensus       599 evl~~  603 (653)
                      |++++
T Consensus       301 ei~~h  305 (382)
T cd05625         301 EIKAH  305 (382)
T ss_pred             HHhcC
Confidence            88865

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=100.00  E-value=1.1e-37  Score=336.06  Aligned_cols=262  Identities=25%  Similarity=0.367  Sum_probs=205.5

Q ss_pred             hcCcCcceeeeeeCcEEEEEEEeCCC-----CcEEEEEEeccCc-hhhHHHHHHHHHHHhhcC-CCceeeeeeeecccce
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGLMPSL-----GLEVAIKRIGHNS-QQGMKEFVAEIMSMGRLR-HRNLVQLHGWCRKQDE  401 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~~~~~-----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~  401 (653)
                      .++|...++||+|+||.||+|.+...     +..||||++.... ....+.+.+|+++++++. ||||++++++|.+.+.
T Consensus        36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~  115 (400)
T cd05105          36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGP  115 (400)
T ss_pred             ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCc
Confidence            35678889999999999999986432     3479999996543 334567899999999996 9999999999999999


Q ss_pred             eEEEEeccCCCCchhhhhccccc---------------------------------------------------------
Q 048419          402 LLLVYDYVPNGSLDKLLFDKDHK---------------------------------------------------------  424 (653)
Q Consensus       402 ~~lV~E~~~~gsL~~~l~~~~~~---------------------------------------------------------  424 (653)
                      .+||||||++|+|.++|......                                                         
T Consensus       116 ~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (400)
T cd05105         116 IYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIK  195 (400)
T ss_pred             eEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhh
Confidence            99999999999999998653210                                                         


Q ss_pred             ----------------------------------ccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcC
Q 048419          425 ----------------------------------LRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDT  470 (653)
Q Consensus       425 ----------------------------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~  470 (653)
                                                        ....+++.+++.++.||++||.|||+   .+|+|+||||+|||++.
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivH~dikp~Nill~~  272 (400)
T cd05105         196 EASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLAS---KNCVHRDLAARNVLLAQ  272 (400)
T ss_pred             hhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChHhEEEeC
Confidence                                              01247888899999999999999999   89999999999999999


Q ss_pred             CCcEEEEeecCcccccCCCC-CcccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHH
Q 048419          471 YLNAKLGDFGLAKIYEHGAN-PQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLV  548 (653)
Q Consensus       471 ~~~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~  548 (653)
                      ++.+||+|||+++....... .......++..|+|||.+.+..++.++|||||||++|||++ |+.||........  +.
T Consensus       273 ~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~--~~  350 (400)
T cd05105         273 GKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDST--FY  350 (400)
T ss_pred             CCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHH--HH
Confidence            99999999999986543221 11222346778999999988889999999999999999997 8899875432211  11


Q ss_pred             HHHHhhhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcCC
Q 048419          549 DWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLGD  607 (653)
Q Consensus       549 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  607 (653)
                      ..+..    +.       .+ .........+.+++.+||+.+|++||++.+|.++|+..
T Consensus       351 ~~~~~----~~-------~~-~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l  397 (400)
T cd05105         351 NKIKS----GY-------RM-AKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESL  397 (400)
T ss_pred             HHHhc----CC-------CC-CCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHH
Confidence            11111    00       00 01122346788999999999999999999999999753

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=100.00  E-value=1.1e-37  Score=321.65  Aligned_cols=266  Identities=23%  Similarity=0.342  Sum_probs=203.5

Q ss_pred             cCcCcceeeeeeCcEEEEEEEe----CCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeeccc--ceeE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLM----PSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQ--DELL  403 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~----~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~--~~~~  403 (653)
                      ++|+..+.||+|+||.||++..    ..++..||+|++........+.+.+|++++++++|+||+++++++...  ..++
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~   83 (284)
T cd05081           4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLR   83 (284)
T ss_pred             ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceE
Confidence            4678889999999999999974    346789999999777666778899999999999999999999987543  4689


Q ss_pred             EEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcc
Q 048419          404 LVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK  483 (653)
Q Consensus       404 lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~  483 (653)
                      +|+||+++++|.+++....    ..+++..++.++.|++.||.|||+   ++++||||||+||++++++.+||+|||+++
T Consensus        84 lv~e~~~~~~L~~~l~~~~----~~l~~~~~~~~~~~l~~aL~~LH~---~~i~H~dlkp~nili~~~~~~~l~dfg~~~  156 (284)
T cd05081          84 LVMEYLPYGSLRDYLQKHR----ERLDHRKLLLYASQICKGMEYLGS---KRYVHRDLATRNILVESENRVKIGDFGLTK  156 (284)
T ss_pred             EEEEecCCCCHHHHHHhcC----cCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCCHhhEEECCCCeEEECCCcccc
Confidence            9999999999999996542    348999999999999999999999   899999999999999999999999999998


Q ss_pred             cccCCCCCc--ccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhc-c---
Q 048419          484 IYEHGANPQ--TTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHL-E---  557 (653)
Q Consensus       484 ~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~-~---  557 (653)
                      .........  .....++..|+|||.+.+..++.++|||||||+++||++|..++......    ....+..... .   
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~----~~~~~~~~~~~~~~~  232 (284)
T cd05081         157 VLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAE----FMRMMGNDKQGQMIV  232 (284)
T ss_pred             cccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchh----hhhhcccccccccch
Confidence            764322211  11122345699999998888999999999999999999988765432211    0000000000 0   


Q ss_pred             cchhHhhhhcc-CcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          558 GEITQAIDQTL-DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       558 ~~~~~~~d~~l-~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                      ..+.+.+.... ..........+.+++.+||+.+|++|||+.||++.|+.
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~  282 (284)
T cd05081         233 YHLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEA  282 (284)
T ss_pred             HHHHHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHh
Confidence            00111111110 01112234678999999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=100.00  E-value=1.6e-37  Score=317.20  Aligned_cols=260  Identities=23%  Similarity=0.380  Sum_probs=209.5

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC---chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN---SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVY  406 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  406 (653)
                      ++|+..+.||+|+||.||+|....+++.||||.+...   .......+.+|++++++++|||++++++++...+..++|+
T Consensus         2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   81 (267)
T cd08228           2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL   81 (267)
T ss_pred             cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence            4788899999999999999999888999999987542   3344567889999999999999999999999999999999


Q ss_pred             eccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccccc
Q 048419          407 DYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE  486 (653)
Q Consensus       407 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~  486 (653)
                      ||+++++|.+++...... ...+++.+++.++.|++.||.|||+   ++++|+||||+||+++.++.++|+|||++....
T Consensus        82 e~~~~~~L~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~  157 (267)
T cd08228          82 ELADAGDLSQMIKYFKKQ-KRLIPERTVWKYFVQLCSAVEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFS  157 (267)
T ss_pred             EecCCCcHHHHHHHhhhc-cCCCCHHHHHHHHHHHHHHHHHHhh---CCeeCCCCCHHHEEEcCCCCEEECccccceecc
Confidence            999999999988653221 3457889999999999999999999   999999999999999999999999999988654


Q ss_pred             CCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhh
Q 048419          487 HGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQ  566 (653)
Q Consensus       487 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  566 (653)
                      .... ......++..|+|||.+.+..++.++||||||+++|||++|+.|+....... ..+...+....         .+
T Consensus       158 ~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~-~~~~~~~~~~~---------~~  226 (267)
T cd08228         158 SKTT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNL-FSLCQKIEQCD---------YP  226 (267)
T ss_pred             chhH-HHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccH-HHHHHHHhcCC---------CC
Confidence            3221 1223467889999999988889999999999999999999999986543211 11111111100         00


Q ss_pred             ccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          567 TLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       567 ~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                        ..........+.+++.+||+.+|++||++.+|++.|++
T Consensus       227 --~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~  264 (267)
T cd08228         227 --PLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQ  264 (267)
T ss_pred             --CCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHH
Confidence              00112234678999999999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=100.00  E-value=1.1e-37  Score=334.53  Aligned_cols=262  Identities=23%  Similarity=0.312  Sum_probs=203.1

Q ss_pred             CcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC--chhhHHHHHHHHHHHhhcCCCceeeeeeeecccc-----eeE
Q 048419          331 GFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQD-----ELL  403 (653)
Q Consensus       331 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~-----~~~  403 (653)
                      +|+..+.||+|+||.||++....+++.||||++...  .....+.+.+|+++++.++|+||+++++++...+     ..+
T Consensus         1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~   80 (372)
T cd07853           1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY   80 (372)
T ss_pred             CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence            477889999999999999999888999999998643  2334567889999999999999999999998776     789


Q ss_pred             EEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcc
Q 048419          404 LVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK  483 (653)
Q Consensus       404 lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~  483 (653)
                      +|+||+. ++|.+++...     ..+++..+..++.||+.||.|||+   ++++||||||+|||++.++.+||+|||+++
T Consensus        81 lv~e~~~-~~l~~~~~~~-----~~l~~~~~~~~~~qi~~aL~~LH~---~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~  151 (372)
T cd07853          81 VVTELMQ-SDLHKIIVSP-----QPLSSDHVKVFLYQILRGLKYLHS---AGILHRDIKPGNLLVNSNCVLKICDFGLAR  151 (372)
T ss_pred             EEeeccc-cCHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChHHEEECCCCCEEecccccee
Confidence            9999996 5787777543     348999999999999999999999   899999999999999999999999999998


Q ss_pred             cccCCCCCcccccccCCcccCccccccC-CCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccch--
Q 048419          484 IYEHGANPQTTHIVGTLGYLAPELTRTG-KATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEI--  560 (653)
Q Consensus       484 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~--  560 (653)
                      ..............++..|+|||.+.+. .++.++|||||||++|||++|+.||............   .........  
T Consensus       152 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i---~~~~g~~~~~~  228 (372)
T cd07853         152 VEEPDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLI---TDLLGTPSLEA  228 (372)
T ss_pred             ecccCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHH---HHHcCCCCHHH
Confidence            6544333333344678999999998764 4789999999999999999999999765543221111   110000000  


Q ss_pred             --------hHhhhhccC---------cCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          561 --------TQAIDQTLD---------YYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       561 --------~~~~d~~l~---------~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                              ...+.....         .......+.+.+++.+||+.||.+|||+.|++++-
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp  289 (372)
T cd07853         229 MRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHP  289 (372)
T ss_pred             HHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCH
Confidence                    000000000         00111246788999999999999999999999864

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.2e-37  Score=331.59  Aligned_cols=241  Identities=23%  Similarity=0.332  Sum_probs=207.6

Q ss_pred             hhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC---chhhHHHHHHHHHHHhhcC-CCceeeeeeeecccceeE
Q 048419          328 VTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN---SQQGMKEFVAEIMSMGRLR-HRNLVQLHGWCRKQDELL  403 (653)
Q Consensus       328 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~  403 (653)
                      .-++|...++||+|.||+|+++..+.+++.+|||.+++.   ..++.+..+.|-+++.... ||.+++++..+...++++
T Consensus       366 ~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~  445 (694)
T KOG0694|consen  366 TLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLF  445 (694)
T ss_pred             cccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEE
Confidence            346789999999999999999999999999999999875   4567788888988888874 999999999999999999


Q ss_pred             EEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcc
Q 048419          404 LVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK  483 (653)
Q Consensus       404 lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~  483 (653)
                      +||||+.||++..+.+.      ..+++..+.-++..|+.||+|||+   ++||+||||.+|||||.+|.+||+||||++
T Consensus       446 fvmey~~Ggdm~~~~~~------~~F~e~rarfyaAev~l~L~fLH~---~~IIYRDlKLdNiLLD~eGh~kiADFGlcK  516 (694)
T KOG0694|consen  446 FVMEYVAGGDLMHHIHT------DVFSEPRARFYAAEVVLGLQFLHE---NGIIYRDLKLDNLLLDTEGHVKIADFGLCK  516 (694)
T ss_pred             EEEEecCCCcEEEEEec------ccccHHHHHHHHHHHHHHHHHHHh---cCceeeecchhheEEcccCcEEeccccccc
Confidence            99999999996555432      348888999999999999999999   999999999999999999999999999998


Q ss_pred             cccCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHh
Q 048419          484 IYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQA  563 (653)
Q Consensus       484 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~  563 (653)
                      .--. ....+...+||+.|||||++.+..|+.+.|-|||||+||||+.|..||.+.++++                   +
T Consensus       517 e~m~-~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee-------------------~  576 (694)
T KOG0694|consen  517 EGMG-QGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEE-------------------V  576 (694)
T ss_pred             ccCC-CCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHH-------------------H
Confidence            6432 2335677899999999999999999999999999999999999999998765532                   2


Q ss_pred             hhhcc---CcCCHHHHHHHHHHHHHcCCCCCCCCCCH
Q 048419          564 IDQTL---DYYDLAEAELVLNLGLFCSAPNPVYRPDM  597 (653)
Q Consensus       564 ~d~~l---~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~  597 (653)
                      .|..+   -.|+.....+...|+.+.+..+|++|--+
T Consensus       577 FdsI~~d~~~yP~~ls~ea~~il~~ll~k~p~kRLG~  613 (694)
T KOG0694|consen  577 FDSIVNDEVRYPRFLSKEAIAIMRRLLRKNPEKRLGS  613 (694)
T ss_pred             HHHHhcCCCCCCCcccHHHHHHHHHHhccCcccccCC
Confidence            22222   12444556788999999999999999866

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.2e-37  Score=315.15  Aligned_cols=253  Identities=26%  Similarity=0.358  Sum_probs=205.4

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc-----hhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS-----QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLL  404 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  404 (653)
                      ++|...+.||+|++|.||++....++..+|+|.+....     ....+.+.+|++++++++||||+++++++.+.+..++
T Consensus         2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~   81 (263)
T cd06625           2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI   81 (263)
T ss_pred             CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence            57888999999999999999998889999999986432     2234578899999999999999999999999999999


Q ss_pred             EEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccc
Q 048419          405 VYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKI  484 (653)
Q Consensus       405 V~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~  484 (653)
                      |+||+++++|.+++...     ..+++..+.+++.|++.||.|||+   .+++|+||+|+||++++++.++|+|||+++.
T Consensus        82 v~e~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~l~~~l~~lH~---~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~  153 (263)
T cd06625          82 FMEYMPGGSVKDQLKAY-----GALTETVTRKYTRQILEGVEYLHS---NMIVHRDIKGANILRDSAGNVKLGDFGASKR  153 (263)
T ss_pred             EEEECCCCcHHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEeeccccee
Confidence            99999999999988654     347888999999999999999999   8999999999999999999999999999976


Q ss_pred             ccCCCCCcc--cccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhH
Q 048419          485 YEHGANPQT--THIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQ  562 (653)
Q Consensus       485 ~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~  562 (653)
                      .........  ....++..|+|||.+.+..++.++||||||+++|||++|+.||.........   .....   ...   
T Consensus       154 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~---~~~~~---~~~---  224 (263)
T cd06625         154 LQTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAI---FKIAT---QPT---  224 (263)
T ss_pred             ccccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHH---HHHhc---cCC---
Confidence            543221111  2345778999999999888999999999999999999999999754332111   00000   000   


Q ss_pred             hhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          563 AIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       563 ~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                           ....+......+.+++.+||+.+|.+||++.+++++.
T Consensus       225 -----~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~  261 (263)
T cd06625         225 -----NPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRHF  261 (263)
T ss_pred             -----CCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhCC
Confidence                 0111222345688999999999999999999999764

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=100.00  E-value=1e-37  Score=329.00  Aligned_cols=251  Identities=23%  Similarity=0.300  Sum_probs=198.8

Q ss_pred             eeeeeeCcEEEEEEEeCCCCcEEEEEEeccC---chhhHHHHHHHHHHHhhc-CCCceeeeeeeecccceeEEEEeccCC
Q 048419          336 NLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN---SQQGMKEFVAEIMSMGRL-RHRNLVQLHGWCRKQDELLLVYDYVPN  411 (653)
Q Consensus       336 ~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~E~~~~  411 (653)
                      ++||+|+||.||++.+..+++.||||+++..   .....+.+..|..++.++ +||||+++++++.+.+.+++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~   80 (329)
T cd05588           1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG   80 (329)
T ss_pred             CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence            4699999999999999999999999999753   233456688899999998 799999999999999999999999999


Q ss_pred             CCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCCCC
Q 048419          412 GSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANP  491 (653)
Q Consensus       412 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~  491 (653)
                      |+|..++...     ..+++..++.++.||+.||.|||+   ++++||||||+|||++.++.+||+|||+++..... ..
T Consensus        81 g~L~~~~~~~-----~~l~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~-~~  151 (329)
T cd05588          81 GDLMFHMQRQ-----RKLPEEHARFYSAEISLALNFLHE---RGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRP-GD  151 (329)
T ss_pred             CCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHeEECCCCCEEECcCccccccccC-CC
Confidence            9999888653     348999999999999999999999   99999999999999999999999999998743211 12


Q ss_pred             cccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhh--HHHHHHHHHhhhcccchhHhhhhccC
Q 048419          492 QTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAA--ELLLVDWVKELHLEGEITQAIDQTLD  569 (653)
Q Consensus       492 ~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~d~~l~  569 (653)
                      ......||..|+|||++.+..++.++|||||||++|||++|+.||.......  .....++.........        . 
T Consensus       152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~--------~-  222 (329)
T cd05588         152 TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQ--------I-  222 (329)
T ss_pred             ccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCC--------C-
Confidence            2234578999999999999899999999999999999999999996322111  0001111111111110        0 


Q ss_pred             cCCHHHHHHHHHHHHHcCCCCCCCCCC------HHHHHHHH
Q 048419          570 YYDLAEAELVLNLGLFCSAPNPVYRPD------MRRVVEFL  604 (653)
Q Consensus       570 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs------~~evl~~L  604 (653)
                      ..+......+.+++.+||+.||.+||+      +.+++++-
T Consensus       223 ~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~hp  263 (329)
T cd05588         223 RIPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSHP  263 (329)
T ss_pred             CCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcCC
Confidence            111122456889999999999999997      77887653

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=100.00  E-value=2.1e-38  Score=315.74  Aligned_cols=264  Identities=25%  Similarity=0.310  Sum_probs=203.1

Q ss_pred             CcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccc-----eeEEE
Q 048419          331 GFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQD-----ELLLV  405 (653)
Q Consensus       331 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~-----~~~lV  405 (653)
                      .|...+++|.|.||.||+|+...+++.||||+.-...+    --..|+++|++++|||||+++-++....     ...||
T Consensus        25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r----~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlV  100 (364)
T KOG0658|consen   25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR----YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLV  100 (364)
T ss_pred             EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC----cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHH
Confidence            45668999999999999999999999999999854432    2247999999999999999998874432     34689


Q ss_pred             EeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCC-CcEEEEeecCccc
Q 048419          406 YDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTY-LNAKLGDFGLAKI  484 (653)
Q Consensus       406 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~-~~~kl~DfGla~~  484 (653)
                      |||||. +|.+.+..... .+..++.-.+.-+..||.+||.|||+   .+|+||||||.|+|+|.+ +.+||||||.|+.
T Consensus       101 leymP~-tL~~~~r~~~~-~~~~mp~~~iKLYt~Qlfrgl~yLh~---~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~  175 (364)
T KOG0658|consen  101 LEYMPE-TLYRVIRHYTR-ANQRMPLLEIKLYTYQLFRGLAYLHS---HGICHRDIKPQNLLVDPDTGVLKICDFGSAKV  175 (364)
T ss_pred             HHhchH-HHHHHHHHHhh-cCCCCceeeeHHHHHHHHHHHHHHHh---cCcccCCCChheEEEcCCCCeEEeccCCccee
Confidence            999987 99998875321 13446666777789999999999999   999999999999999877 8999999999998


Q ss_pred             ccCCCCCcccccccCCcccCccccccC-CCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHh
Q 048419          485 YEHGANPQTTHIVGTLGYLAPELTRTG-KATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQA  563 (653)
Q Consensus       485 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~  563 (653)
                      +..+...  .....|..|+|||.+.+. .|+.+.||||.||++.||+-|+.-|.+....++..+.-.+-......++...
T Consensus       176 L~~~epn--iSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~m  253 (364)
T KOG0658|consen  176 LVKGEPN--ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSM  253 (364)
T ss_pred             eccCCCc--eeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhc
Confidence            8765443  345778999999998765 6999999999999999999999999886655544333222222212122111


Q ss_pred             -------hhhccC-----c-CCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          564 -------IDQTLD-----Y-YDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       564 -------~d~~l~-----~-~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                             -.+.+.     . .......++++++.++++.+|.+|.++.|++.+--
T Consensus       254 n~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~f  308 (364)
T KOG0658|consen  254 NPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPF  308 (364)
T ss_pred             CcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchh
Confidence                   111110     0 12233577899999999999999999999997653

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.3e-37  Score=334.55  Aligned_cols=255  Identities=21%  Similarity=0.275  Sum_probs=200.5

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC---chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN---SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVY  406 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  406 (653)
                      ++|...+.||+|+||.||++....+++.||||++...   .....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus         1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~   80 (377)
T cd05629           1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM   80 (377)
T ss_pred             CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence            4688899999999999999999999999999998543   2334567889999999999999999999999999999999


Q ss_pred             eccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccccc
Q 048419          407 DYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE  486 (653)
Q Consensus       407 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~  486 (653)
                      ||+++|+|.+++...     ..+++.....++.|++.||+|||+   ++|+||||||+|||++.++.+||+|||+++.+.
T Consensus        81 E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~ql~~aL~~LH~---~givHrDlkp~NIll~~~~~~kl~DfGla~~~~  152 (377)
T cd05629          81 EFLPGGDLMTMLIKY-----DTFSEDVTRFYMAECVLAIEAVHK---LGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFH  152 (377)
T ss_pred             eCCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHEEECCCCCEEEeecccccccc
Confidence            999999999998653     347888899999999999999999   999999999999999999999999999996331


Q ss_pred             CCCC------------C----------------------------------cccccccCCcccCccccccCCCCCcccee
Q 048419          487 HGAN------------P----------------------------------QTTHIVGTLGYLAPELTRTGKATTSTDVY  520 (653)
Q Consensus       487 ~~~~------------~----------------------------------~~~~~~gt~~y~aPE~~~~~~~~~ksDV~  520 (653)
                      ....            .                                  ......||+.|+|||++.+..++.++|||
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diw  232 (377)
T cd05629         153 KQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWW  232 (377)
T ss_pred             cccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeE
Confidence            1000            0                                  00124689999999999988999999999


Q ss_pred             ehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCC---CCH
Q 048419          521 SYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYR---PDM  597 (653)
Q Consensus       521 s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~R---Ps~  597 (653)
                      ||||++|||++|+.||.........  .. +...  ...+ ..  +  .  .......+.+++.+|++ +|.+|   |++
T Consensus       233 SlGvil~elltG~~Pf~~~~~~~~~--~~-i~~~--~~~~-~~--p--~--~~~~s~~~~dli~~lL~-~~~~r~~r~~~  299 (377)
T cd05629         233 SLGAIMFECLIGWPPFCSENSHETY--RK-IINW--RETL-YF--P--D--DIHLSVEAEDLIRRLIT-NAENRLGRGGA  299 (377)
T ss_pred             ecchhhhhhhcCCCCCCCCCHHHHH--HH-HHcc--CCcc-CC--C--C--CCCCCHHHHHHHHHHhc-CHhhcCCCCCH
Confidence            9999999999999999765432111  00 0000  0000 00  0  0  00123567889999997 66664   699


Q ss_pred             HHHHHHHc
Q 048419          598 RRVVEFLL  605 (653)
Q Consensus       598 ~evl~~L~  605 (653)
                      .|++++..
T Consensus       300 ~~~l~hp~  307 (377)
T cd05629         300 HEIKSHPF  307 (377)
T ss_pred             HHHhcCCC
Confidence            99998753

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=100.00  E-value=2e-37  Score=326.12  Aligned_cols=248  Identities=23%  Similarity=0.314  Sum_probs=199.7

Q ss_pred             CcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc---hhhHHHHHHHHHHHhhc-CCCceeeeeeeecccceeEEEE
Q 048419          331 GFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS---QQGMKEFVAEIMSMGRL-RHRNLVQLHGWCRKQDELLLVY  406 (653)
Q Consensus       331 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~  406 (653)
                      +|...+.||+|+||.||+|....+++.||||++....   ....+.+..|..++..+ +|++|+++++++...+.+++||
T Consensus         1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (323)
T cd05616           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM   80 (323)
T ss_pred             CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence            4778899999999999999999889999999986532   23345567788888877 5899999999999999999999


Q ss_pred             eccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccccc
Q 048419          407 DYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE  486 (653)
Q Consensus       407 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~  486 (653)
                      ||+++|+|.+++...     ..+++.++..++.||+.||+|||+   ++|+||||||+|||++.++.+||+|||+++...
T Consensus        81 E~~~~g~L~~~~~~~-----~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~  152 (323)
T cd05616          81 EYVNGGDLMYQIQQV-----GRFKEPHAVFYAAEIAIGLFFLHS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENM  152 (323)
T ss_pred             cCCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCEEecCCCHHHeEECCCCcEEEccCCCceecC
Confidence            999999999888654     348899999999999999999999   899999999999999999999999999997543


Q ss_pred             CCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhh
Q 048419          487 HGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQ  566 (653)
Q Consensus       487 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  566 (653)
                      ... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.......   +...+..    ..       
T Consensus       153 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~---~~~~i~~----~~-------  217 (323)
T cd05616         153 WDG-VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE---LFQSIME----HN-------  217 (323)
T ss_pred             CCC-CccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHH---HHHHHHh----CC-------
Confidence            211 12234578999999999999999999999999999999999999998654321   1111111    00       


Q ss_pred             ccCcCCHHHHHHHHHHHHHcCCCCCCCCCCH-----HHHHHH
Q 048419          567 TLDYYDLAEAELVLNLGLFCSAPNPVYRPDM-----RRVVEF  603 (653)
Q Consensus       567 ~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~-----~evl~~  603 (653)
                        ..++......+.+++.+|++.+|.+|++.     .++.++
T Consensus       218 --~~~p~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h  257 (323)
T cd05616         218 --VAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH  257 (323)
T ss_pred             --CCCCCcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcC
Confidence              01111234568899999999999999984     666543

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.7e-38  Score=330.54  Aligned_cols=251  Identities=23%  Similarity=0.354  Sum_probs=213.0

Q ss_pred             CcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEeccCCC
Q 048419          333 GEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNG  412 (653)
Q Consensus       333 ~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~g  412 (653)
                      ...++||-|-||.||.|+++.....||||.++.. .-..++|+.|..+|+.++|||+|+|+|+|..+..+|||+|||..|
T Consensus       270 tMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKED-tMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEfM~yG  348 (1157)
T KOG4278|consen  270 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEFMCYG  348 (1157)
T ss_pred             eeeeccCCCcccceeeeeeeccceeeehhhhhhc-chhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEecccCc
Confidence            3478999999999999999998999999999554 446789999999999999999999999999999999999999999


Q ss_pred             CchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCCCCc
Q 048419          413 SLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQ  492 (653)
Q Consensus       413 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~  492 (653)
                      +|.+||.+..   +..++--..+.++.||+.|+.||..   +++|||||..+|+|+.++..+|++||||++++..+....
T Consensus       349 NLLdYLRecn---r~ev~avvLlyMAtQIsSaMeYLEk---knFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYTA  422 (1157)
T KOG4278|consen  349 NLLDYLRECN---RSEVPAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYTA  422 (1157)
T ss_pred             cHHHHHHHhc---hhhcchhHHHHHHHHHHHHHHHHHH---hhhhhhhhhhhhccccccceEEeeccchhhhhcCCceec
Confidence            9999998876   4556777788999999999999999   999999999999999999999999999999987766554


Q ss_pred             ccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhccCcC
Q 048419          493 TTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYY  571 (653)
Q Consensus       493 ~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~  571 (653)
                      .....-.+.|.|||-+....++.|+|||+|||+|||+.| |..||-+-+-....       .+...+-       + -..
T Consensus       423 HAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY-------~LLEkgy-------R-M~~  487 (1157)
T KOG4278|consen  423 HAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY-------GLLEKGY-------R-MDG  487 (1157)
T ss_pred             ccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHH-------HHHhccc-------c-ccC
Confidence            444455779999999999999999999999999999998 88888654432211       1111111       1 123


Q ss_pred             CHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          572 DLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       572 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                      +..|++.+.+|++.||+.+|.+||+++|+-+.++
T Consensus       488 PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafE  521 (1157)
T KOG4278|consen  488 PEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFE  521 (1157)
T ss_pred             CCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHH
Confidence            4457788999999999999999999999987665

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=100.00  E-value=2.1e-37  Score=314.50  Aligned_cols=254  Identities=31%  Similarity=0.483  Sum_probs=204.8

Q ss_pred             cCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhH--HHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEecc
Q 048419          332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGM--KEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYV  409 (653)
Q Consensus       332 f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~--~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~  409 (653)
                      |+..+.||+|+||+||++....+++.+|+|.+........  .....|+..+++++|+||+++++++...+..++||||+
T Consensus         1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~   80 (260)
T PF00069_consen    1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC   80 (260)
T ss_dssp             EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred             CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence            4568899999999999999999999999999977644332  23456999999999999999999999999999999999


Q ss_pred             CCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCC
Q 048419          410 PNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGA  489 (653)
Q Consensus       410 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~  489 (653)
                      ++++|.+++..     ...+++.+++.++.|+++||.+||+   .+++|+||||+||++++++.++|+|||.+... ...
T Consensus        81 ~~~~L~~~l~~-----~~~~~~~~~~~~~~qi~~~L~~Lh~---~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~-~~~  151 (260)
T PF00069_consen   81 PGGSLQDYLQK-----NKPLSEEEILKIAYQILEALAYLHS---KGIVHRDIKPENILLDENGEVKLIDFGSSVKL-SEN  151 (260)
T ss_dssp             TTEBHHHHHHH-----HSSBBHHHHHHHHHHHHHHHHHHHH---TTEEESSBSGGGEEESTTSEEEESSGTTTEES-TST
T ss_pred             ccccccccccc-----ccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccc-ccc
Confidence            99999999973     3458999999999999999999999   89999999999999999999999999999764 122


Q ss_pred             CCcccccccCCcccCccccc-cCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhcc
Q 048419          490 NPQTTHIVGTLGYLAPELTR-TGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTL  568 (653)
Q Consensus       490 ~~~~~~~~gt~~y~aPE~~~-~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l  568 (653)
                      ........++..|+|||.+. +...+.++||||+|+++++|++|+.|+..................    ...   ....
T Consensus       152 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~----~~~---~~~~  224 (260)
T PF00069_consen  152 NENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKR----PLP---SSSQ  224 (260)
T ss_dssp             TSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHT----HHH---HHTT
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccc----ccc---cccc
Confidence            23444567899999999998 788999999999999999999999999875222211111111100    000   0000


Q ss_pred             CcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 048419          569 DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEF  603 (653)
Q Consensus       569 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  603 (653)
                      .  .......+.+++.+||+.||++||++.+++++
T Consensus       225 ~--~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~  257 (260)
T PF00069_consen  225 Q--SREKSEELRDLIKKMLSKDPEQRPSAEELLKH  257 (260)
T ss_dssp             S--HTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTS
T ss_pred             c--cchhHHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            0  00112789999999999999999999999875

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=100.00  E-value=2.4e-37  Score=319.01  Aligned_cols=259  Identities=22%  Similarity=0.379  Sum_probs=204.2

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeC----CCCcEEEEEEeccC-chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMP----SLGLEVAIKRIGHN-SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLL  404 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~----~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  404 (653)
                      ++|+..+.||+|+||.||+|...    ..+..+++|.+... ..+....+.+|++++++++|+||+++++++...+..++
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l   84 (283)
T cd05090           5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCM   84 (283)
T ss_pred             hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEE
Confidence            35677899999999999999852    34678999999643 34455788999999999999999999999999999999


Q ss_pred             EEeccCCCCchhhhhcccc------------cccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCC
Q 048419          405 VYDYVPNGSLDKLLFDKDH------------KLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYL  472 (653)
Q Consensus       405 V~E~~~~gsL~~~l~~~~~------------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~  472 (653)
                      ||||+++++|.+++.....            .....+++.+.+.++.|++.||.|||+   ++++|+||||+|||+++++
T Consensus        85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~---~~i~H~dlkp~nili~~~~  161 (283)
T cd05090          85 LFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSS---HFFVHKDLAARNILIGEQL  161 (283)
T ss_pred             EEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHh---cCeehhccccceEEEcCCC
Confidence            9999999999999864321            012357889999999999999999999   8999999999999999999


Q ss_pred             cEEEEeecCcccccCCCC-CcccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHH
Q 048419          473 NAKLGDFGLAKIYEHGAN-PQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDW  550 (653)
Q Consensus       473 ~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~  550 (653)
                      .+||+|||+++....... .......++..|+|||.+.+..++.++|||||||++|||++ |..||.......   +.+.
T Consensus       162 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~---~~~~  238 (283)
T cd05090         162 HVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQE---VIEM  238 (283)
T ss_pred             cEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHH---HHHH
Confidence            999999999986533221 11222345678999999988889999999999999999998 888886543211   1111


Q ss_pred             HHhhhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          551 VKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       551 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                      +..    ....        ..+......+.+++.+||+.+|.+||++.+|+++|..
T Consensus       239 ~~~----~~~~--------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~  282 (283)
T cd05090         239 VRK----RQLL--------PCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS  282 (283)
T ss_pred             HHc----CCcC--------CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence            111    0000        0111234568899999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=100.00  E-value=3.6e-37  Score=314.96  Aligned_cols=259  Identities=27%  Similarity=0.368  Sum_probs=208.1

Q ss_pred             HHHHhhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeE
Q 048419          324 ELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELL  403 (653)
Q Consensus       324 el~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~  403 (653)
                      |++.+++++.....||+|+||.||+|.+..++..|++|.+........+.+.+|+.++++++|+||+++++++...+..+
T Consensus         2 ~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~   81 (268)
T cd06624           2 EYEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFK   81 (268)
T ss_pred             CcccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEE
Confidence            34566788888899999999999999998889999999997776667788999999999999999999999999999999


Q ss_pred             EEEeccCCCCchhhhhcccccccccc--hhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcC-CCcEEEEeec
Q 048419          404 LVYDYVPNGSLDKLLFDKDHKLRKLL--TWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDT-YLNAKLGDFG  480 (653)
Q Consensus       404 lV~E~~~~gsL~~~l~~~~~~~~~~l--~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~-~~~~kl~DfG  480 (653)
                      +|+||+++++|.+++....    ..+  ++..+..++.||+.||.|||+   ++|+||||||+||+++. ++.+||+|||
T Consensus        82 lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~h~dl~p~nil~~~~~~~~~l~dfg  154 (268)
T cd06624          82 IFMEQVPGGSLSALLRSKW----GPLKDNEQTIIFYTKQILEGLKYLHD---NQIVHRDIKGDNVLVNTYSGVVKISDFG  154 (268)
T ss_pred             EEEecCCCCCHHHHHHHhc----ccCCCcHHHHHHHHHHHHHHHHHHHH---CCEeecCCCHHHEEEcCCCCeEEEecch
Confidence            9999999999999997542    224  778888999999999999999   89999999999999976 6799999999


Q ss_pred             CcccccCCCCCcccccccCCcccCccccccCC--CCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhccc
Q 048419          481 LAKIYEHGANPQTTHIVGTLGYLAPELTRTGK--ATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEG  558 (653)
Q Consensus       481 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~  558 (653)
                      ++....... .......++..|+|||++....  ++.++||||||+++|||++|+.|+..........   +.....   
T Consensus       155 ~~~~~~~~~-~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~---~~~~~~---  227 (268)
T cd06624         155 TSKRLAGIN-PCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAM---FKVGMF---  227 (268)
T ss_pred             hheecccCC-CccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhH---hhhhhh---
Confidence            987654322 1222345788999999986643  7889999999999999999999986533211110   000000   


Q ss_pred             chhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 048419          559 EITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEF  603 (653)
Q Consensus       559 ~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  603 (653)
                             ......+......+.+++.+||+.+|.+||++.|++++
T Consensus       228 -------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~  265 (268)
T cd06624         228 -------KIHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQD  265 (268)
T ss_pred             -------ccCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhC
Confidence                   00011122234668899999999999999999999875

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.8e-37  Score=315.11  Aligned_cols=251  Identities=27%  Similarity=0.394  Sum_probs=201.2

Q ss_pred             CcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEeccC
Q 048419          331 GFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVP  410 (653)
Q Consensus       331 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~  410 (653)
                      +|+..+.||+|+||.||+|.+.. +..+|+|.+..... ....+.+|++++++++|+||+++++++...+..++||||++
T Consensus         5 ~~~~~~~lg~G~~~~v~~~~~~~-~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~   82 (256)
T cd05059           5 ELTFLKELGSGQFGVVHLGKWRG-KIDVAIKMIREGAM-SEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMA   82 (256)
T ss_pred             HcchhhhhccCCCceEEEeEecC-CccEEEEEeccCCC-CHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCC
Confidence            46678899999999999998864 66899999864332 34578899999999999999999999999999999999999


Q ss_pred             CCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCCC
Q 048419          411 NGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGAN  490 (653)
Q Consensus       411 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~  490 (653)
                      +++|.+++....    ..+++..++.++.|++.||+|||+   ++++||||||+||++++++.+||+|||+++.......
T Consensus        83 ~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~  155 (256)
T cd05059          83 NGCLLNYLRERK----GKLGTEWLLDMCSDVCEAMEYLES---NGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQY  155 (256)
T ss_pred             CCCHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHH---CCcccccccHhhEEECCCCcEEECCcccceecccccc
Confidence            999999997543    258899999999999999999999   8999999999999999999999999999986543221


Q ss_pred             CcccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhccC
Q 048419          491 PQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLD  569 (653)
Q Consensus       491 ~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~  569 (653)
                      .......++..|+|||.+.+..++.++||||||+++|||++ |+.||......+   ....+....         ..   
T Consensus       156 ~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~---~~~~~~~~~---------~~---  220 (256)
T cd05059         156 TSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSE---VVESVSAGY---------RL---  220 (256)
T ss_pred             cccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHH---HHHHHHcCC---------cC---
Confidence            11112234457999999998899999999999999999999 788887543321   111111100         00   


Q ss_pred             cCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          570 YYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       570 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                      ..+...+..+.+++.+||+.+|++||++.|+++.|.
T Consensus       221 ~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l~  256 (256)
T cd05059         221 YRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQLT  256 (256)
T ss_pred             CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHhC
Confidence            011123567899999999999999999999999873

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1e-37  Score=310.26  Aligned_cols=270  Identities=25%  Similarity=0.331  Sum_probs=213.0

Q ss_pred             HHhhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEecc--CchhhHHHHHHHHHHHhhcCCCceeeeeeeecc-----
Q 048419          326 ASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGH--NSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRK-----  398 (653)
Q Consensus       326 ~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~-----  398 (653)
                      ..+...|...+.||+|++|.|+.+.++.+|+.||||++..  ...-..++-.+|+.+|+.++|+||+.+++.+..     
T Consensus        18 ~~i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~   97 (359)
T KOG0660|consen   18 FEIPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDK   97 (359)
T ss_pred             EeccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccc
Confidence            3455566667899999999999999999999999999973  345556788899999999999999999998755     


Q ss_pred             cceeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEe
Q 048419          399 QDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGD  478 (653)
Q Consensus       399 ~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D  478 (653)
                      -+..|+|+|+| ..+|...++..     +.|+.....-+..|+++||.|+|+   .+|+||||||+|+|++++..+||+|
T Consensus        98 f~DvYiV~elM-etDL~~iik~~-----~~L~d~H~q~f~YQiLrgLKyiHS---AnViHRDLKPsNll~n~~c~lKI~D  168 (359)
T KOG0660|consen   98 FNDVYLVFELM-ETDLHQIIKSQ-----QDLTDDHAQYFLYQILRGLKYIHS---ANVIHRDLKPSNLLLNADCDLKICD  168 (359)
T ss_pred             cceeEEehhHH-hhHHHHHHHcC-----ccccHHHHHHHHHHHHHhcchhhc---ccccccccchhheeeccCCCEEecc
Confidence            34689999999 56899998764     348889999999999999999999   8999999999999999999999999


Q ss_pred             ecCcccccCC-CCCcccccccCCcccCccccc-cCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhc
Q 048419          479 FGLAKIYEHG-ANPQTTHIVGTLGYLAPELTR-TGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHL  556 (653)
Q Consensus       479 fGla~~~~~~-~~~~~~~~~gt~~y~aPE~~~-~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~  556 (653)
                      ||+|+..... .....+..+.|..|.|||++. ...|+.+.||||.||++.||++|+..|-+.+...+..+.-.+-....
T Consensus       169 FGLAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~  248 (359)
T KOG0660|consen  169 FGLARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPS  248 (359)
T ss_pred             ccceeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCC
Confidence            9999987542 123446678899999999875 45799999999999999999999999987765554443322221111


Q ss_pred             cc--------chhHhhhhcc--CcCCH-----HHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          557 EG--------EITQAIDQTL--DYYDL-----AEAELVLNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       557 ~~--------~~~~~~d~~l--~~~~~-----~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                      +.        +....+....  ...+.     ......++|+.+||..||.+|+|++|.+++-
T Consensus       249 ~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hP  311 (359)
T KOG0660|consen  249 EEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHP  311 (359)
T ss_pred             HHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcCh
Confidence            11        1111111111  11111     2236788999999999999999999999865

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=100.00  E-value=1.4e-37  Score=329.00  Aligned_cols=260  Identities=25%  Similarity=0.366  Sum_probs=202.8

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCC-----CCcEEEEEEeccCc-hhhHHHHHHHHHHHhhc-CCCceeeeeeeeccc-ce
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPS-----LGLEVAIKRIGHNS-QQGMKEFVAEIMSMGRL-RHRNLVQLHGWCRKQ-DE  401 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~-----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~-~~  401 (653)
                      ++|+..+.||+|+||.||+|...+     +++.||+|++.... ....+.+..|+.++.++ +|+||++++++|... ..
T Consensus         7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~   86 (337)
T cd05054           7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGP   86 (337)
T ss_pred             HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCC
Confidence            468889999999999999997543     34789999986542 33456788999999999 899999999988654 56


Q ss_pred             eEEEEeccCCCCchhhhhccccc--------------------------------------------------------c
Q 048419          402 LLLVYDYVPNGSLDKLLFDKDHK--------------------------------------------------------L  425 (653)
Q Consensus       402 ~~lV~E~~~~gsL~~~l~~~~~~--------------------------------------------------------~  425 (653)
                      +++++||+++++|.+++......                                                        .
T Consensus        87 ~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (337)
T cd05054          87 LMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELY  166 (337)
T ss_pred             EEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHHh
Confidence            88999999999999998643210                                                        0


Q ss_pred             cccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCCCC-cccccccCCcccC
Q 048419          426 RKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANP-QTTHIVGTLGYLA  504 (653)
Q Consensus       426 ~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~a  504 (653)
                      ...++|.++.+++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+++.+...... ......++..|+|
T Consensus       167 ~~~l~~~~~~~~~~qi~~aL~~lH~---~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~a  243 (337)
T cd05054         167 KEPLTLEDLISYSFQVARGMEFLAS---RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMA  243 (337)
T ss_pred             hcCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccC
Confidence            1368999999999999999999999   89999999999999999999999999999865432211 1223355678999


Q ss_pred             ccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhccCcCCHHHHHHHHHHH
Q 048419          505 PELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLG  583 (653)
Q Consensus       505 PE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~  583 (653)
                      ||++.+..++.++|||||||++|||++ |..||......+.  +...+.    .+..        ...+......+.+++
T Consensus       244 PE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~--~~~~~~----~~~~--------~~~~~~~~~~~~~l~  309 (337)
T cd05054         244 PESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEE--FCRRLK----EGTR--------MRAPEYATPEIYSIM  309 (337)
T ss_pred             cHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHH--HHHHHh----ccCC--------CCCCccCCHHHHHHH
Confidence            999999999999999999999999998 9999865322111  111110    1100        001112346788999


Q ss_pred             HHcCCCCCCCCCCHHHHHHHHcC
Q 048419          584 LFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       584 ~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                      .+||+.+|++||++.||+++|+.
T Consensus       310 ~~cl~~~p~~RPs~~ell~~l~~  332 (337)
T cd05054         310 LDCWHNNPEDRPTFSELVEILGD  332 (337)
T ss_pred             HHHccCChhhCcCHHHHHHHHHH
Confidence            99999999999999999999975

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=100.00  E-value=2.9e-37  Score=324.84  Aligned_cols=242  Identities=26%  Similarity=0.315  Sum_probs=192.7

Q ss_pred             eeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc---hhhHHHHHHHHH-HHhhcCCCceeeeeeeecccceeEEEEeccCC
Q 048419          336 NLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS---QQGMKEFVAEIM-SMGRLRHRNLVQLHGWCRKQDELLLVYDYVPN  411 (653)
Q Consensus       336 ~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~  411 (653)
                      +.||+|+||.||+|.+..+|+.||||++....   ....+.+..|.. +++.++||||+++++++...+..++||||+++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~   80 (323)
T cd05575           1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG   80 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence            46999999999999999899999999986432   223344555554 56789999999999999999999999999999


Q ss_pred             CCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCCCC
Q 048419          412 GSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANP  491 (653)
Q Consensus       412 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~  491 (653)
                      |+|..++...     ..+++..+..++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+++..... ..
T Consensus        81 g~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~---~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~-~~  151 (323)
T cd05575          81 GELFFHLQRE-----RSFPEPRARFYAAEIASALGYLHS---LNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEH-SK  151 (323)
T ss_pred             CCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCCHHHeEECCCCcEEEeccCCCcccccC-CC
Confidence            9999988653     347888999999999999999999   89999999999999999999999999998753221 12


Q ss_pred             cccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhccCcC
Q 048419          492 QTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYY  571 (653)
Q Consensus       492 ~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~  571 (653)
                      ......||+.|+|||++.+..++.++|||||||++|||++|+.||........   .+.+.    .+        .+ ..
T Consensus       152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~---~~~i~----~~--------~~-~~  215 (323)
T cd05575         152 TTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEM---YDNIL----NK--------PL-RL  215 (323)
T ss_pred             ccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHH---HHHHH----cC--------CC-CC
Confidence            23345789999999999998999999999999999999999999976433211   00000    00        00 01


Q ss_pred             CHHHHHHHHHHHHHcCCCCCCCCCCHH----HHHH
Q 048419          572 DLAEAELVLNLGLFCSAPNPVYRPDMR----RVVE  602 (653)
Q Consensus       572 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~----evl~  602 (653)
                      .......+.+++.+||+.||.+||+++    ++++
T Consensus       216 ~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~il~  250 (323)
T cd05575         216 KPNISVSARHLLEGLLQKDRTKRLGAKDDFLEIKN  250 (323)
T ss_pred             CCCCCHHHHHHHHHHhhcCHHhCCCCCCCHHHHHc
Confidence            111245688999999999999999984    5554

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=100.00  E-value=2.3e-37  Score=318.12  Aligned_cols=260  Identities=24%  Similarity=0.377  Sum_probs=206.1

Q ss_pred             hhcCcCcceeeeeeCcEEEEEEEeCC-----CCcEEEEEEeccCc-hhhHHHHHHHHHHHhhcCCCceeeeeeeecccce
Q 048419          328 VTKGFGEQNLVGSGGFGRVYRGLMPS-----LGLEVAIKRIGHNS-QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDE  401 (653)
Q Consensus       328 at~~f~~~~~LG~G~fg~Vy~~~~~~-----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~  401 (653)
                      .+++|...+.||+|++|.||+|.+..     .+..||+|.+.... ......+..|+.++++++|+||+++++++.+.+.
T Consensus         4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~   83 (277)
T cd05036           4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLP   83 (277)
T ss_pred             CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCC
Confidence            35678889999999999999999876     67889999986443 3345678999999999999999999999999989


Q ss_pred             eEEEEeccCCCCchhhhhccccc--ccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCC---cEEE
Q 048419          402 LLLVYDYVPNGSLDKLLFDKDHK--LRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYL---NAKL  476 (653)
Q Consensus       402 ~~lV~E~~~~gsL~~~l~~~~~~--~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~---~~kl  476 (653)
                      .++||||+++++|.+++......  ....++|.++++++.||+.||+|||+   ++++|+||||+||+++.++   .+||
T Consensus        84 ~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~nil~~~~~~~~~~kl  160 (277)
T cd05036          84 RFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEE---NHFIHRDIAARNCLLTCKGPGRVAKI  160 (277)
T ss_pred             cEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccchheEEEeccCCCcceEe
Confidence            99999999999999999765321  12358999999999999999999999   8999999999999998654   5999


Q ss_pred             EeecCcccccCCCCC-cccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhh
Q 048419          477 GDFGLAKIYEHGANP-QTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKEL  554 (653)
Q Consensus       477 ~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~  554 (653)
                      +|||+++........ .......+..|+|||++.+..++.++|||||||++|||++ |+.||.......   +.+.+.. 
T Consensus       161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~---~~~~~~~-  236 (277)
T cd05036         161 ADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQE---VMEFVTG-  236 (277)
T ss_pred             ccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH---HHHHHHc-
Confidence            999999865322111 1112233568999999998899999999999999999997 999987544322   1111111 


Q ss_pred             hcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          555 HLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       555 ~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                        ...         ...+......+.+++.+||+.+|++||++.+|+++|+
T Consensus       237 --~~~---------~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~  276 (277)
T cd05036         237 --GGR---------LDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ  276 (277)
T ss_pred             --CCc---------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence              000         0111223467889999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=100.00  E-value=2e-37  Score=318.68  Aligned_cols=250  Identities=25%  Similarity=0.343  Sum_probs=197.8

Q ss_pred             eeeeCcEEEEEEEeCCCCcEEEEEEeccCc---hhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEeccCCCCc
Q 048419          338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNS---QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSL  414 (653)
Q Consensus       338 LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL  414 (653)
                      ||+|+||.||++....+|+.||+|++....   ....+.+..|++++++++||||+++++++......++||||+++++|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L   80 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL   80 (277)
T ss_pred             CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence            699999999999999889999999986432   22234556799999999999999999999999999999999999999


Q ss_pred             hhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCCCCccc
Q 048419          415 DKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTT  494 (653)
Q Consensus       415 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~  494 (653)
                      .+++....   ...+++..++.++.|++.||+|||+   ++++||||||+||+++.++.+||+|||++.......  ...
T Consensus        81 ~~~~~~~~---~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~--~~~  152 (277)
T cd05607          81 KYHIYNVG---ERGLEMERVIHYSAQITCGILHLHS---MDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK--TIT  152 (277)
T ss_pred             HHHHHhcc---ccCCCHHHHHHHHHHHHHHHHHHHH---CCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCc--eee
Confidence            98886543   3458899999999999999999999   999999999999999999999999999988654322  223


Q ss_pred             ccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhccCcCCHH
Q 048419          495 HIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYYDLA  574 (653)
Q Consensus       495 ~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~  574 (653)
                      ...|+..|+|||++.+..++.++||||+||++|||++|+.||........  ..+..... ....        .......
T Consensus       153 ~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~--~~~~~~~~-~~~~--------~~~~~~~  221 (277)
T cd05607         153 QRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVA--KEELKRRT-LEDE--------VKFEHQN  221 (277)
T ss_pred             ccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhh--HHHHHHHh-hccc--------ccccccc
Confidence            34689999999999888899999999999999999999999975332111  00111110 0000        1000012


Q ss_pred             HHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          575 EAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       575 ~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                      ....+.+++.+||+.||.+||+++|+++.+..
T Consensus       222 ~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~~  253 (277)
T cd05607         222 FTEESKDICRLFLAKKPEDRLGSREKNDDPRK  253 (277)
T ss_pred             CCHHHHHHHHHHhccCHhhCCCCccchhhhhc
Confidence            24568899999999999999999877654443

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=100.00  E-value=2.6e-37  Score=318.72  Aligned_cols=265  Identities=26%  Similarity=0.359  Sum_probs=202.4

Q ss_pred             cCcceeeeeeCcEEEEEEE----eCCCCcEEEEEEeccCc-hhhHHHHHHHHHHHhhcCCCceeeeeeeeccc--ceeEE
Q 048419          332 FGEQNLVGSGGFGRVYRGL----MPSLGLEVAIKRIGHNS-QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQ--DELLL  404 (653)
Q Consensus       332 f~~~~~LG~G~fg~Vy~~~----~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~--~~~~l  404 (653)
                      |...+.||+|+||.||++.    ...++..||+|.+.... ....+.+.+|++.+++++||||++++++|...  ...++
T Consensus         6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   85 (283)
T cd05080           6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQL   85 (283)
T ss_pred             ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEE
Confidence            3778999999999998765    33457889999987543 33467788999999999999999999988654  35899


Q ss_pred             EEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccc
Q 048419          405 VYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKI  484 (653)
Q Consensus       405 V~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~  484 (653)
                      ||||+++++|.+++...      .+++.+++.++.|+++||.|||+   ++++|+||||+||++++++.+||+|||+++.
T Consensus        86 v~e~~~~~~l~~~~~~~------~l~~~~~~~i~~~l~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~  156 (283)
T cd05080          86 IMEYVPLGSLRDYLPKH------KLNLAQLLLFAQQICEGMAYLHS---QHYIHRDLAARNVLLDNDRLVKIGDFGLAKA  156 (283)
T ss_pred             EecCCCCCCHHHHHHHc------CCCHHHHHHHHHHHHHHHHHHHH---CCeeccccChheEEEcCCCcEEEeecccccc
Confidence            99999999999998643      38999999999999999999999   8999999999999999999999999999986


Q ss_pred             ccCCCCC--cccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhH
Q 048419          485 YEHGANP--QTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQ  562 (653)
Q Consensus       485 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~  562 (653)
                      .......  ......++..|+|||.+.+..++.++||||||++++||++|+.|+........ ..............+.+
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~  235 (283)
T cd05080         157 VPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFE-EMIGPKQGQMTVVRLIE  235 (283)
T ss_pred             cCCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhh-hhhcccccccchhhhhh
Confidence            6432211  11222456679999999888899999999999999999999999865332110 00111110011111122


Q ss_pred             hhhhcc-CcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          563 AIDQTL-DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       563 ~~d~~l-~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                      .++... ...+......+.+++..||+.+|++||++.+|++.|+.
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~  280 (283)
T cd05080         236 LLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKE  280 (283)
T ss_pred             hhhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHH
Confidence            222211 11122335689999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=100.00  E-value=2.5e-37  Score=318.28  Aligned_cols=255  Identities=27%  Similarity=0.382  Sum_probs=200.8

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCc----EEEEEEeccCc-hhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGL----EVAIKRIGHNS-QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLL  404 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  404 (653)
                      ++|+..+.||+|+||.||+|.+..++.    .+++|.+.... ....+++..|+..+++++|+||+++++++.. ...++
T Consensus         7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-~~~~~   85 (279)
T cd05111           7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG-ASLQL   85 (279)
T ss_pred             hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECC-CccEE
Confidence            356678899999999999999866665    47788875432 3345678889999999999999999998864 45788


Q ss_pred             EEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccc
Q 048419          405 VYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKI  484 (653)
Q Consensus       405 V~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~  484 (653)
                      ++||+++|+|.+++....    ..+++..++.++.||+.||.|||+   ++++|+||||+||++++++.+||+|||+++.
T Consensus        86 i~e~~~~gsL~~~l~~~~----~~~~~~~~~~i~~qi~~~l~~lH~---~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~  158 (279)
T cd05111          86 VTQLSPLGSLLDHVRQHR----DSLDPQRLLNWCVQIAKGMYYLEE---HRMVHRNLAARNILLKSDSIVQIADFGVADL  158 (279)
T ss_pred             EEEeCCCCcHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHH---CCEeccccCcceEEEcCCCcEEEcCCcccee
Confidence            999999999999997643    358999999999999999999999   8999999999999999999999999999986


Q ss_pred             ccCCCC-CcccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhhcccchhH
Q 048419          485 YEHGAN-PQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELHLEGEITQ  562 (653)
Q Consensus       485 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~  562 (653)
                      ...... .......++..|+|||.+.+..++.++|||||||++|||++ |+.|+.......   +.+.+.    .+....
T Consensus       159 ~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~---~~~~~~----~~~~~~  231 (279)
T cd05111         159 LYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHE---VPDLLE----KGERLA  231 (279)
T ss_pred             ccCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH---HHHHHH----CCCcCC
Confidence            543221 12223456778999999998899999999999999999998 999987644321   111111    111000


Q ss_pred             hhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcCC
Q 048419          563 AIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLGD  607 (653)
Q Consensus       563 ~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  607 (653)
                        .+      ..+...+.+++.+||..+|.+||++.|+++.|..-
T Consensus       232 --~~------~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~  268 (279)
T cd05111         232 --QP------QICTIDVYMVMVKCWMIDENVRPTFKELANEFTRM  268 (279)
T ss_pred             --CC------CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence              00      01234567899999999999999999999988763

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=100.00  E-value=3.6e-37  Score=313.51  Aligned_cols=253  Identities=26%  Similarity=0.404  Sum_probs=202.4

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEecc
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYV  409 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~  409 (653)
                      ++|+..+.||+|+||.||+|...+ +..+|+|.+..... ..+.+.+|+.++++++|+|++++++++.+ +..+++|||+
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~-~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~e~~   82 (260)
T cd05070           6 ESLQLIKKLGNGQFGEVWMGTWNG-NTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVSE-EPIYIVTEYM   82 (260)
T ss_pred             HHhhhhheeccccCceEEEEEecC-CceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEECC-CCcEEEEEec
Confidence            467778999999999999998764 67799999865433 34678999999999999999999998854 5688999999


Q ss_pred             CCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCC
Q 048419          410 PNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGA  489 (653)
Q Consensus       410 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~  489 (653)
                      ++++|.+++....   ...+++.+++.++.|++.||.|||+   ++++|+||||+||++++++.+||+|||++.......
T Consensus        83 ~~~~L~~~~~~~~---~~~~~~~~~~~~~~~l~~al~~lH~---~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~  156 (260)
T cd05070          83 SKGSLLDFLKDGE---GRALKLPNLVDMAAQVAAGMAYIER---MNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNE  156 (260)
T ss_pred             CCCcHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCccceEEEeCCceEEeCCceeeeeccCcc
Confidence            9999999997643   2347899999999999999999999   899999999999999999999999999998764432


Q ss_pred             CCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhcc
Q 048419          490 NPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTL  568 (653)
Q Consensus       490 ~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l  568 (653)
                      ........++..|+|||.+.+..++.++||||||+++|||++ |+.||......+   ..+......   .         
T Consensus       157 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~---~~~~~~~~~---~---------  221 (260)
T cd05070         157 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNRE---VLEQVERGY---R---------  221 (260)
T ss_pred             cccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHH---HHHHHHcCC---C---------
Confidence            222222345668999999988889999999999999999999 888886543221   111111100   0         


Q ss_pred             CcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          569 DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       569 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                      ...+......+.+++.+|++.+|.+|||+.++.+.|+.
T Consensus       222 ~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~  259 (260)
T cd05070         222 MPCPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED  259 (260)
T ss_pred             CCCCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence            01112234678999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=100.00  E-value=2.2e-37  Score=316.15  Aligned_cols=255  Identities=25%  Similarity=0.324  Sum_probs=204.9

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEecc
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYV  409 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~  409 (653)
                      ++|+..+.||+|+||.||+|+...+++.||+|++..........+.+|+.++++++|+||+++++++...+..++|+||+
T Consensus         9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~~   88 (267)
T cd06646           9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEYC   88 (267)
T ss_pred             hhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeCC
Confidence            46888999999999999999998889999999997665555667889999999999999999999999999999999999


Q ss_pred             CCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCC
Q 048419          410 PNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGA  489 (653)
Q Consensus       410 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~  489 (653)
                      ++++|.+++...     ..+++.++..++.|++.||.|||+   ++|+|+||||+||+++.++.+||+|||++.......
T Consensus        89 ~~~~L~~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~  160 (267)
T cd06646          89 GGGSLQDIYHVT-----GPLSELQIAYVCRETLQGLAYLHS---KGKMHRDIKGANILLTDNGDVKLADFGVAAKITATI  160 (267)
T ss_pred             CCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEECCCCCEEECcCccceeecccc
Confidence            999999998653     347899999999999999999999   899999999999999999999999999998654322


Q ss_pred             CCcccccccCCcccCccccc---cCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhh
Q 048419          490 NPQTTHIVGTLGYLAPELTR---TGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQ  566 (653)
Q Consensus       490 ~~~~~~~~gt~~y~aPE~~~---~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  566 (653)
                      . ......++..|+|||.+.   ...++.++|||||||++|||++|+.|+..........  .+     .....   ..+
T Consensus       161 ~-~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~--~~-----~~~~~---~~~  229 (267)
T cd06646         161 A-KRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALF--LM-----SKSNF---QPP  229 (267)
T ss_pred             c-ccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhhe--ee-----ecCCC---CCC
Confidence            1 122346888999999874   3457889999999999999999999986443221110  00     00000   001


Q ss_pred             ccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          567 TLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       567 ~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                      ... ........+.+++.+||+.+|++||++.+++++|
T Consensus       230 ~~~-~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l  266 (267)
T cd06646         230 KLK-DKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL  266 (267)
T ss_pred             CCc-cccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence            110 0112346788999999999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=100.00  E-value=2.9e-37  Score=314.77  Aligned_cols=253  Identities=28%  Similarity=0.404  Sum_probs=202.6

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEecc
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYV  409 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~  409 (653)
                      ++|...+.||+|+||.||+|.+.++ ..||+|++..... ..+.+.+|++++++++|+||+++++++.+ +..++||||+
T Consensus         6 ~~~~~~~~lg~g~~~~v~~~~~~~~-~~valK~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~e~~   82 (262)
T cd05071           6 ESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYM   82 (262)
T ss_pred             HHeeEeeecCCCCCCcEEEEEecCC-ceEEEEecccCcc-CHHHHHHHHHHHHhCCCCCcceEEEEECC-CCcEEEEEcC
Confidence            4688899999999999999988654 5699999865332 34678999999999999999999998754 5679999999


Q ss_pred             CCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCC
Q 048419          410 PNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGA  489 (653)
Q Consensus       410 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~  489 (653)
                      ++|+|.+++....   ...+++.+++.++.|++.||.|||+   .+++|+||||+||+++.++.+||+|||+++......
T Consensus        83 ~~~~L~~~~~~~~---~~~~~~~~~~~~~~~l~~aL~~lH~---~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~  156 (262)
T cd05071          83 SKGSLLDFLKGEM---GKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE  156 (262)
T ss_pred             CCCcHHHHHhhcc---ccCCCHHHHHHHHHHHHHHHHHHHH---CCccccccCcccEEEcCCCcEEeccCCceeeccccc
Confidence            9999999997543   2457899999999999999999999   899999999999999999999999999998665433


Q ss_pred             CCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhcc
Q 048419          490 NPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTL  568 (653)
Q Consensus       490 ~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l  568 (653)
                      ........++..|+|||...+..++.++|||||||++|||++ |+.||........   .+...    .+.        .
T Consensus       157 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~---~~~~~----~~~--------~  221 (262)
T cd05071         157 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV---LDQVE----RGY--------R  221 (262)
T ss_pred             cccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHH---HHHHh----cCC--------C
Confidence            222223346678999999988889999999999999999999 7888865433211   11000    000        0


Q ss_pred             CcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          569 DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       569 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                      ..........+.+++.+|++.+|++||++.++++.|+.
T Consensus       222 ~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~  259 (262)
T cd05071         222 MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLED  259 (262)
T ss_pred             CCCccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHH
Confidence            01112345678899999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=2.6e-37  Score=317.36  Aligned_cols=258  Identities=25%  Similarity=0.387  Sum_probs=207.0

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCC-----CcEEEEEEeccCc-hhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSL-----GLEVAIKRIGHNS-QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELL  403 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~-----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~  403 (653)
                      ++|...+.||+|+||.||+|.....     +..||+|.+.... ......+.+|+.+++.++|+||+++++++......+
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~   85 (277)
T cd05032           6 EKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPTL   85 (277)
T ss_pred             HHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCcE
Confidence            5678889999999999999987643     3789999986543 344567889999999999999999999999999999


Q ss_pred             EEEeccCCCCchhhhhcccccc-----cccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEe
Q 048419          404 LVYDYVPNGSLDKLLFDKDHKL-----RKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGD  478 (653)
Q Consensus       404 lV~E~~~~gsL~~~l~~~~~~~-----~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D  478 (653)
                      +||||+++++|.+++.......     ...++|.+++.++.|++.||.|||+   .+++||||||+||+++.++.+||+|
T Consensus        86 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~di~p~nill~~~~~~kl~d  162 (277)
T cd05032          86 VVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAA---KKFVHRDLAARNCMVAEDLTVKIGD  162 (277)
T ss_pred             EEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHh---CCccccccChheEEEcCCCCEEECC
Confidence            9999999999999997643211     2347889999999999999999999   9999999999999999999999999


Q ss_pred             ecCcccccCCCC-CcccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhhc
Q 048419          479 FGLAKIYEHGAN-PQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELHL  556 (653)
Q Consensus       479 fGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~  556 (653)
                      ||+++....... .......++..|+|||.+.+..++.++|||||||++|||++ |+.||.......   +.+++.    
T Consensus       163 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~---~~~~~~----  235 (277)
T cd05032         163 FGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEE---VLKFVI----  235 (277)
T ss_pred             cccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHH---HHHHHh----
Confidence            999986543221 12233456789999999988889999999999999999998 888886543322   111111    


Q ss_pred             ccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          557 EGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       557 ~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                      .+...        ..+......+.+++.+||+.+|++|||+.++++.|+
T Consensus       236 ~~~~~--------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~  276 (277)
T cd05032         236 DGGHL--------DLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK  276 (277)
T ss_pred             cCCCC--------CCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence            11110        111122567889999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=100.00  E-value=3.3e-37  Score=319.43  Aligned_cols=261  Identities=24%  Similarity=0.366  Sum_probs=206.8

Q ss_pred             hhcCcCcceeeeeeCcEEEEEEEeCCC-----CcEEEEEEeccC-chhhHHHHHHHHHHHhhc-CCCceeeeeeeecccc
Q 048419          328 VTKGFGEQNLVGSGGFGRVYRGLMPSL-----GLEVAIKRIGHN-SQQGMKEFVAEIMSMGRL-RHRNLVQLHGWCRKQD  400 (653)
Q Consensus       328 at~~f~~~~~LG~G~fg~Vy~~~~~~~-----~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~  400 (653)
                      ..++|+..+.||+|+||.||++.....     ...+|+|.+... ..+....+.+|+++++++ +|+||+++++++...+
T Consensus        10 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~   89 (293)
T cd05053          10 PRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEG   89 (293)
T ss_pred             CHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCC
Confidence            345678889999999999999987533     378999998754 334456788999999999 7999999999999999


Q ss_pred             eeEEEEeccCCCCchhhhhcccc-----------cccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEc
Q 048419          401 ELLLVYDYVPNGSLDKLLFDKDH-----------KLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLD  469 (653)
Q Consensus       401 ~~~lV~E~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~  469 (653)
                      ..+++|||+++|+|.+++.....           .....+++..+++++.|++.||.|||+   ++|+||||||+||+++
T Consensus        90 ~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~---~~ivH~dlkp~Nil~~  166 (293)
T cd05053          90 PLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLAS---KKCIHRDLAARNVLVT  166 (293)
T ss_pred             CeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHH---CCccccccceeeEEEc
Confidence            99999999999999999965321           113468999999999999999999999   8999999999999999


Q ss_pred             CCCcEEEEeecCcccccCCCC-CcccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHH
Q 048419          470 TYLNAKLGDFGLAKIYEHGAN-PQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLL  547 (653)
Q Consensus       470 ~~~~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l  547 (653)
                      .++.+||+|||+++....... .......++..|+|||.+.+..++.++|||||||++|||++ |..|+........   
T Consensus       167 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~---  243 (293)
T cd05053         167 EDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEEL---  243 (293)
T ss_pred             CCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHHH---
Confidence            999999999999986543221 11222335678999999988889999999999999999998 8888865432211   


Q ss_pred             HHHHHhhhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          548 VDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       548 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                      .+....    +.        ....+......+.+|+.+||+.+|.+|||+.|+++.|+.
T Consensus       244 ~~~~~~----~~--------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~  290 (293)
T cd05053         244 FKLLKE----GY--------RMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDR  290 (293)
T ss_pred             HHHHHc----CC--------cCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHH
Confidence            111110    00        001122234678899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=100.00  E-value=1.5e-37  Score=304.12  Aligned_cols=275  Identities=24%  Similarity=0.300  Sum_probs=211.0

Q ss_pred             CcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc-hhhH-HHHHHHHHHHhhcCCCceeeeeeeeccc--ceeEEEE
Q 048419          331 GFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS-QQGM-KEFVAEIMSMGRLRHRNLVQLHGWCRKQ--DELLLVY  406 (653)
Q Consensus       331 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~-~~~~~E~~~l~~l~H~niv~l~g~~~~~--~~~~lV~  406 (653)
                      +|+..+.|++|.||.||+|+++.+++.||+|+++... +++. -.-++|+.+|.+++|||||.+..+....  +.+|+||
T Consensus        77 efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~VM  156 (419)
T KOG0663|consen   77 EFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIVM  156 (419)
T ss_pred             HHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeeeH
Confidence            4666889999999999999999999999999997653 2221 1357899999999999999998876443  4799999


Q ss_pred             eccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccccc
Q 048419          407 DYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE  486 (653)
Q Consensus       407 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~  486 (653)
                      |||+. +|..++....    .++...+...+..|+++|++|||.   +.|+|||||++|+|+...|.+||+|||+|+.+.
T Consensus       157 e~~Eh-DLksl~d~m~----q~F~~~evK~L~~QlL~glk~lH~---~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~yg  228 (419)
T KOG0663|consen  157 EYVEH-DLKSLMETMK----QPFLPGEVKTLMLQLLRGLKHLHD---NWILHRDLKTSNLLLSHKGILKIADFGLAREYG  228 (419)
T ss_pred             HHHHh-hHHHHHHhcc----CCCchHHHHHHHHHHHHHHHHHhh---ceeEecccchhheeeccCCcEEecccchhhhhc
Confidence            99976 9999997764    457888899999999999999999   899999999999999999999999999999887


Q ss_pred             CCCCCcccccccCCcccCccccccC-CCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhH---
Q 048419          487 HGANPQTTHIVGTLGYLAPELTRTG-KATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQ---  562 (653)
Q Consensus       487 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~---  562 (653)
                      .... ..+..+-|..|+|||.+.+. .|+...|+||+||++.||+++++.|.+..+.++...+-.......+.....   
T Consensus       229 sp~k-~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~  307 (419)
T KOG0663|consen  229 SPLK-PYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSE  307 (419)
T ss_pred             CCcc-cCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccc
Confidence            6533 34556779999999998765 589999999999999999999999987766554432211111111111110   


Q ss_pred             --hhh---------hcc-CcCCHH-HHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC-CCCCCCCC
Q 048419          563 --AID---------QTL-DYYDLA-EAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG-DSSLPPLP  614 (653)
Q Consensus       563 --~~d---------~~l-~~~~~~-~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~-~~~~p~~p  614 (653)
                        .+.         ..+ ..+... ..+.-.+|....+..||.+|-|+.|.+++=.. +.|.|..|
T Consensus       308 lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e~P~p~~P  373 (419)
T KOG0663|consen  308 LPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFRETPLPIDP  373 (419)
T ss_pred             cchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcccccccCCCCCCh
Confidence              000         000 111111 33667889999999999999999999987654 34444333

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=100.00  E-value=3.1e-37  Score=315.29  Aligned_cols=256  Identities=30%  Similarity=0.470  Sum_probs=205.3

Q ss_pred             hcCcCcceeeeeeCcEEEEEEEeCCCCc---EEEEEEeccC-chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEE
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGLMPSLGL---EVAIKRIGHN-SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLL  404 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~---~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  404 (653)
                      .++|+..+.||+|+||.||+|....++.   .+|+|.+... .....+.+.+|++++++++|+|++++.+++...+..++
T Consensus         4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   83 (268)
T cd05063           4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMI   83 (268)
T ss_pred             hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEE
Confidence            3567888999999999999999865443   7999998655 34446778999999999999999999999999999999


Q ss_pred             EEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccc
Q 048419          405 VYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKI  484 (653)
Q Consensus       405 V~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~  484 (653)
                      ||||+++++|.+++....    ..+++.+++.++.|++.||+|||+   .+++|+||||+||+++.++.+||+|||++..
T Consensus        84 v~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~~l~~al~~lH~---~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~  156 (268)
T cd05063          84 ITEYMENGALDKYLRDHD----GEFSSYQLVGMLRGIAAGMKYLSD---MNYVHRDLAARNILVNSNLECKVSDFGLSRV  156 (268)
T ss_pred             EEEcCCCCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccchhhEEEcCCCcEEECCCcccee
Confidence            999999999999986542    348999999999999999999999   8999999999999999999999999999986


Q ss_pred             ccCCCCCccc--ccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhhcccchh
Q 048419          485 YEHGANPQTT--HIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELHLEGEIT  561 (653)
Q Consensus       485 ~~~~~~~~~~--~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~  561 (653)
                      ..........  ....+..|+|||++....++.++|||||||++|||++ |+.||.......   +...+...   ..  
T Consensus       157 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~---~~~~i~~~---~~--  228 (268)
T cd05063         157 LEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHE---VMKAINDG---FR--  228 (268)
T ss_pred             cccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHH---HHHHHhcC---CC--
Confidence            6433221111  1223457999999988889999999999999999998 999996543321   11111110   00  


Q ss_pred             HhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          562 QAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       562 ~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                             ..........+.+++.+||+.+|.+||++.+|++.|+.
T Consensus       229 -------~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~  266 (268)
T cd05063         229 -------LPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDK  266 (268)
T ss_pred             -------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHh
Confidence                   00111234668899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.7e-37  Score=316.26  Aligned_cols=257  Identities=25%  Similarity=0.347  Sum_probs=206.8

Q ss_pred             HhhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCch--------------hhHHHHHHHHHHHhhcCCCceeee
Q 048419          327 SVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQ--------------QGMKEFVAEIMSMGRLRHRNLVQL  392 (653)
Q Consensus       327 ~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~--------------~~~~~~~~E~~~l~~l~H~niv~l  392 (653)
                      ..-+.|...+.||+|.||.|-+|+...+++.||||++.+...              ...+...+|+.+|++|+|+|||+|
T Consensus        94 k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~L  173 (576)
T KOG0585|consen   94 KQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKL  173 (576)
T ss_pred             eehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEE
Confidence            344778889999999999999999999999999999965311              123578999999999999999999


Q ss_pred             eeeeccc--ceeEEEEeccCCCCchhhhhccccccccc-chhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEc
Q 048419          393 HGWCRKQ--DELLLVYDYVPNGSLDKLLFDKDHKLRKL-LTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLD  469 (653)
Q Consensus       393 ~g~~~~~--~~~~lV~E~~~~gsL~~~l~~~~~~~~~~-l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~  469 (653)
                      +++..+.  +.+|||+|||..|.+...=.      .++ |++.+.++++.++..||+|||.   ++||||||||+|+||+
T Consensus       174 iEvLDDP~s~~~YlVley~s~G~v~w~p~------d~~els~~~Ar~ylrDvv~GLEYLH~---QgiiHRDIKPsNLLl~  244 (576)
T KOG0585|consen  174 IEVLDDPESDKLYLVLEYCSKGEVKWCPP------DKPELSEQQARKYLRDVVLGLEYLHY---QGIIHRDIKPSNLLLS  244 (576)
T ss_pred             EEeecCcccCceEEEEEeccCCccccCCC------CcccccHHHHHHHHHHHHHHHHHHHh---cCeeccccchhheEEc
Confidence            9998775  47999999999887754321      233 8999999999999999999999   9999999999999999


Q ss_pred             CCCcEEEEeecCcccccCCC----CCcccccccCCcccCccccccCC----CCCccceeehHHHHHHHHhCCCCCChhhh
Q 048419          470 TYLNAKLGDFGLAKIYEHGA----NPQTTHIVGTLGYLAPELTRTGK----ATTSTDVYSYGILMLEVACGRRSIEPQKA  541 (653)
Q Consensus       470 ~~~~~kl~DfGla~~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~----~~~ksDV~s~Gvvl~elltG~~p~~~~~~  541 (653)
                      ++|++||+|||.+.....+.    .......+||+.|+|||...++.    ...+.||||+||+||-|+.|+.||-....
T Consensus       245 ~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~  324 (576)
T KOG0585|consen  245 SDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFE  324 (576)
T ss_pred             CCCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchH
Confidence            99999999999998663321    12234468999999999987743    35689999999999999999999976443


Q ss_pred             hhHHHHHHHHHhhhcccchhHhhhhccCcC-CHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcCC
Q 048419          542 AAELLLVDWVKELHLEGEITQAIDQTLDYY-DLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLGD  607 (653)
Q Consensus       542 ~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~-~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  607 (653)
                      .+   +            ...++...|... ..+..+.+.+|++++|+.||+.|.+..+|..+....
T Consensus       325 ~~---l------------~~KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt  376 (576)
T KOG0585|consen  325 LE---L------------FDKIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVT  376 (576)
T ss_pred             HH---H------------HHHHhcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhheecceec
Confidence            21   1            122233333111 124567899999999999999999999999998643

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=100.00  E-value=2.9e-37  Score=325.07  Aligned_cols=241  Identities=26%  Similarity=0.299  Sum_probs=192.0

Q ss_pred             eeeeeeCcEEEEEEEeCCCCcEEEEEEeccC---chhhHHHHHHHHH-HHhhcCCCceeeeeeeecccceeEEEEeccCC
Q 048419          336 NLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN---SQQGMKEFVAEIM-SMGRLRHRNLVQLHGWCRKQDELLLVYDYVPN  411 (653)
Q Consensus       336 ~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~-~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~  411 (653)
                      +.||+|+||.||+|....+|+.+|+|++...   .....+.+..|.. +++.++||||+++++++...+..++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~   80 (325)
T cd05604           1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG   80 (325)
T ss_pred             CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence            4699999999999999989999999998643   2233445556654 56779999999999999999999999999999


Q ss_pred             CCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCCCC
Q 048419          412 GSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANP  491 (653)
Q Consensus       412 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~  491 (653)
                      |+|..++...     ..+++.++..++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+++..... ..
T Consensus        81 ~~L~~~l~~~-----~~~~~~~~~~~~~qi~~al~~lH~---~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~-~~  151 (325)
T cd05604          81 GELFFHLQRE-----RSFPEPRARFYAAEIASALGYLHS---INIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQ-SD  151 (325)
T ss_pred             CCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHeEECCCCCEEEeecCCcccCCCC-CC
Confidence            9999888653     348899999999999999999999   89999999999999999999999999998753221 12


Q ss_pred             cccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhccCcC
Q 048419          492 QTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYY  571 (653)
Q Consensus       492 ~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~  571 (653)
                      ......||+.|+|||.+.+..++.++|||||||++|||++|+.||...+....   .+.+.    ..        .+ ..
T Consensus       152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~---~~~~~----~~--------~~-~~  215 (325)
T cd05604         152 TTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEM---YDNIL----HK--------PL-VL  215 (325)
T ss_pred             CcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHH---HHHHH----cC--------Cc-cC
Confidence            23345789999999999998999999999999999999999999976543211   11100    00        00 00


Q ss_pred             CHHHHHHHHHHHHHcCCCCCCCCCCHHHHH
Q 048419          572 DLAEAELVLNLGLFCSAPNPVYRPDMRRVV  601 (653)
Q Consensus       572 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  601 (653)
                      .......+.+++.+|++.+|.+||++++.+
T Consensus       216 ~~~~~~~~~~ll~~ll~~~p~~R~~~~~~~  245 (325)
T cd05604         216 RPGASLTAWSILEELLEKDRQRRLGAKEDF  245 (325)
T ss_pred             CCCCCHHHHHHHHHHhccCHHhcCCCCCCH
Confidence            111345678899999999999999886433

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=100.00  E-value=3e-37  Score=317.80  Aligned_cols=258  Identities=23%  Similarity=0.357  Sum_probs=206.1

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeC-----CCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMP-----SLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLL  404 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  404 (653)
                      +++...+.||+|+||.||++...     .++..+|+|.+........+.+.+|++.+++++|+||+++++++...+..++
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   84 (280)
T cd05092           5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLM   84 (280)
T ss_pred             HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEE
Confidence            45667889999999999999742     3467899999877766677889999999999999999999999999999999


Q ss_pred             EEeccCCCCchhhhhccccc----------ccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcE
Q 048419          405 VYDYVPNGSLDKLLFDKDHK----------LRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNA  474 (653)
Q Consensus       405 V~E~~~~gsL~~~l~~~~~~----------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~  474 (653)
                      ++||+++++|.+++......          ....+++.+++.++.|++.||+|||+   ++++|+||||+|||+++++.+
T Consensus        85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~---~~i~H~dlkp~nil~~~~~~~  161 (280)
T cd05092          85 VFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLAS---LHFVHRDLATRNCLVGQGLVV  161 (280)
T ss_pred             EEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHH---CCeecccccHhhEEEcCCCCE
Confidence            99999999999999764321          11358899999999999999999999   999999999999999999999


Q ss_pred             EEEeecCcccccCCCC-CcccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHH
Q 048419          475 KLGDFGLAKIYEHGAN-PQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVK  552 (653)
Q Consensus       475 kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~  552 (653)
                      ||+|||+++....... .......+++.|+|||.+.+..++.++|||||||++|||++ |+.||.........   ....
T Consensus       162 kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~---~~~~  238 (280)
T cd05092         162 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAI---ECIT  238 (280)
T ss_pred             EECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHH---HHHH
Confidence            9999999976533221 11122345678999999998899999999999999999998 88888654332211   1111


Q ss_pred             hhhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          553 ELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       553 ~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                      .    +..        ...+......+.+++.+||+.||.+||++.||++.|+
T Consensus       239 ~----~~~--------~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~  279 (280)
T cd05092         239 Q----GRE--------LERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ  279 (280)
T ss_pred             c----Ccc--------CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence            0    000        0011123456889999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=1.2e-37  Score=326.88  Aligned_cols=239  Identities=26%  Similarity=0.338  Sum_probs=193.4

Q ss_pred             eeeeeeCcEEEEEEEe---CCCCcEEEEEEeccCc--hhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEeccC
Q 048419          336 NLVGSGGFGRVYRGLM---PSLGLEVAIKRIGHNS--QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVP  410 (653)
Q Consensus       336 ~~LG~G~fg~Vy~~~~---~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~  410 (653)
                      +.||+|+||.||++..   ..+|+.||+|++....  ......+..|++++++++||||+++++++...+.+++||||++
T Consensus         2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   81 (318)
T cd05582           2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR   81 (318)
T ss_pred             ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence            5799999999999876   3568999999996532  2234567789999999999999999999999999999999999


Q ss_pred             CCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCCC
Q 048419          411 NGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGAN  490 (653)
Q Consensus       411 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~  490 (653)
                      +|+|.+++...     ..+++..++.++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+++...... 
T Consensus        82 ~~~L~~~l~~~-----~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~-  152 (318)
T cd05582          82 GGDLFTRLSKE-----VMFTEEDVKFYLAELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE-  152 (318)
T ss_pred             CCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCC-
Confidence            99999998653     348999999999999999999999   899999999999999999999999999988653321 


Q ss_pred             CcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhccCc
Q 048419          491 PQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDY  570 (653)
Q Consensus       491 ~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~  570 (653)
                      .......|++.|+|||.+.+..++.++|||||||++|||++|+.||........   ...+..    ..        . .
T Consensus       153 ~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~---~~~i~~----~~--------~-~  216 (318)
T cd05582         153 KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKET---MTMILK----AK--------L-G  216 (318)
T ss_pred             CceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHH---HHHHHc----CC--------C-C
Confidence            223345789999999999888899999999999999999999999976543211   111110    00        0 0


Q ss_pred             CCHHHHHHHHHHHHHcCCCCCCCCCCHHH
Q 048419          571 YDLAEAELVLNLGLFCSAPNPVYRPDMRR  599 (653)
Q Consensus       571 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~e  599 (653)
                      .+......+.+++.+||+.||.+||++.+
T Consensus       217 ~p~~~~~~~~~li~~~l~~~P~~R~~a~~  245 (318)
T cd05582         217 MPQFLSPEAQSLLRALFKRNPANRLGAGP  245 (318)
T ss_pred             CCCCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence            11122456789999999999999999544

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=100.00  E-value=4.8e-37  Score=322.84  Aligned_cols=238  Identities=26%  Similarity=0.324  Sum_probs=189.8

Q ss_pred             eeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc---hhhHHHHHHHHH-HHhhcCCCceeeeeeeecccceeEEEEeccCC
Q 048419          336 NLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS---QQGMKEFVAEIM-SMGRLRHRNLVQLHGWCRKQDELLLVYDYVPN  411 (653)
Q Consensus       336 ~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~  411 (653)
                      ++||+|+||.||+|.+..+++.||+|++....   ......+..|.. +++.++||||+++++++.+.+..++||||+++
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~   80 (321)
T cd05603           1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG   80 (321)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            46999999999999999889999999986432   222344555554 67889999999999999999999999999999


Q ss_pred             CCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCCCC
Q 048419          412 GSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANP  491 (653)
Q Consensus       412 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~  491 (653)
                      ++|..++...     ..+++.++..++.||+.||.|||+   ++|+||||||+||+++.++.+||+|||+++..... ..
T Consensus        81 ~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~L~~lH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~-~~  151 (321)
T cd05603          81 GELFFHLQRE-----RCFLEPRARFYAAEVASAIGYLHS---LNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEP-EE  151 (321)
T ss_pred             CCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeEECCCCCEEEccCCCCccCCCC-CC
Confidence            9998888643     347888889999999999999999   89999999999999999999999999998753221 12


Q ss_pred             cccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhccCcC
Q 048419          492 QTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYY  571 (653)
Q Consensus       492 ~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~  571 (653)
                      ......||+.|+|||.+.+..++.++|||||||++|||++|+.||...+...   +.+.+..    .        .+ ..
T Consensus       152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~---~~~~i~~----~--------~~-~~  215 (321)
T cd05603         152 TTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQ---MYDNILH----K--------PL-QL  215 (321)
T ss_pred             ccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHH---HHHHHhc----C--------CC-CC
Confidence            2334578999999999998889999999999999999999999997654221   1111110    0        00 11


Q ss_pred             CHHHHHHHHHHHHHcCCCCCCCCCCHH
Q 048419          572 DLAEAELVLNLGLFCSAPNPVYRPDMR  598 (653)
Q Consensus       572 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~  598 (653)
                      +......+.+++.+||+.+|.+||+..
T Consensus       216 ~~~~~~~~~~li~~~l~~~p~~R~~~~  242 (321)
T cd05603         216 PGGKTVAACDLLVGLLHKDQRRRLGAK  242 (321)
T ss_pred             CCCCCHHHHHHHHHHccCCHhhcCCCC
Confidence            112345688999999999999999764

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=100.00  E-value=6e-37  Score=313.62  Aligned_cols=257  Identities=23%  Similarity=0.381  Sum_probs=202.7

Q ss_pred             cCcceeeeeeCcEEEEEEEeCCC---CcEEEEEEeccC--chhhHHHHHHHHHHHhhcCCCceeeeeeeecccce-----
Q 048419          332 FGEQNLVGSGGFGRVYRGLMPSL---GLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDE-----  401 (653)
Q Consensus       332 f~~~~~LG~G~fg~Vy~~~~~~~---~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~-----  401 (653)
                      |...+.||+|+||.||+|.+..+   +..||||++...  .....+.+.+|++.+++++|+||+++++++...+.     
T Consensus         1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   80 (273)
T cd05035           1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP   80 (273)
T ss_pred             CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence            45678999999999999987643   478999998653  33446789999999999999999999998866554     


Q ss_pred             -eEEEEeccCCCCchhhhhccccc-ccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEee
Q 048419          402 -LLLVYDYVPNGSLDKLLFDKDHK-LRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDF  479 (653)
Q Consensus       402 -~~lV~E~~~~gsL~~~l~~~~~~-~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df  479 (653)
                       .++++||+++|+|..++...... ....+++...+.++.|++.||.|||+   ++++||||||+||++++++.+||+||
T Consensus        81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~df  157 (273)
T cd05035          81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSN---RNFIHRDLAARNCMLREDMTVCVADF  157 (273)
T ss_pred             ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHh---CCeeccccchheEEECCCCeEEECCc
Confidence             79999999999999998654211 13468999999999999999999999   89999999999999999999999999


Q ss_pred             cCcccccCCCCC-cccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhhcc
Q 048419          480 GLAKIYEHGANP-QTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELHLE  557 (653)
Q Consensus       480 Gla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~  557 (653)
                      |+++........ ......++..|+|||.+.+..++.++|||||||++|||++ |..||.......   +.+++...   
T Consensus       158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~---~~~~~~~~---  231 (273)
T cd05035         158 GLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHE---IYDYLRHG---  231 (273)
T ss_pred             cceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHH---HHHHHHcC---
Confidence            999865433211 1122234678999999988889999999999999999999 888886543321   11222111   


Q ss_pred             cchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          558 GEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       558 ~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                       .        ....+......+.+++.+||+.||.+||++.|+++.|+.
T Consensus       232 -~--------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~  271 (273)
T cd05035         232 -N--------RLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLEN  271 (273)
T ss_pred             -C--------CCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHh
Confidence             0        001112235678999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=100.00  E-value=4.2e-37  Score=314.00  Aligned_cols=260  Identities=25%  Similarity=0.398  Sum_probs=208.8

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC---chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN---SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVY  406 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  406 (653)
                      ++|+..+.||+|+||.||++....++..+|||.+...   ......++.+|+.+++.++|+||+++++++.+.+..+++|
T Consensus         2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~   81 (267)
T cd08229           2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL   81 (267)
T ss_pred             chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence            3577788999999999999998888999999988643   2334568889999999999999999999999999999999


Q ss_pred             eccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccccc
Q 048419          407 DYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE  486 (653)
Q Consensus       407 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~  486 (653)
                      ||+++++|.+++..... ....+++.+++.++.||+.||.|||+   ++++|+||||+||+++.++.++|+|||++....
T Consensus        82 e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~  157 (267)
T cd08229          82 ELADAGDLSRMIKHFKK-QKRLIPEKTVWKYFVQLCSALEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFS  157 (267)
T ss_pred             EecCCCCHHHHHHHhhc-cCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCCEEECcchhhhccc
Confidence            99999999999865322 13458999999999999999999999   999999999999999999999999999988654


Q ss_pred             CCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhh
Q 048419          487 HGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQ  566 (653)
Q Consensus       487 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  566 (653)
                      .... ......++..|+|||.+.+..++.++||||||+++|||++|..||........ .....+.         ....+
T Consensus       158 ~~~~-~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~-~~~~~~~---------~~~~~  226 (267)
T cd08229         158 SKTT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLY-SLCKKIE---------QCDYP  226 (267)
T ss_pred             cCCc-ccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHH-HHhhhhh---------cCCCC
Confidence            3321 12234688899999999888899999999999999999999999865332111 1111110         00001


Q ss_pred             ccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          567 TLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       567 ~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                      .+  ........+.+++.+||+.+|.+||||.+|++.++.
T Consensus       227 ~~--~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~  264 (267)
T cd08229         227 PL--PSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKR  264 (267)
T ss_pred             CC--CcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhh
Confidence            00  111234678899999999999999999999988854

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=100.00  E-value=4.4e-37  Score=318.25  Aligned_cols=258  Identities=24%  Similarity=0.335  Sum_probs=203.5

Q ss_pred             CcCcceeeeeeCcEEEEEEEeCC-----CCcEEEEEEeccCc-hhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEE
Q 048419          331 GFGEQNLVGSGGFGRVYRGLMPS-----LGLEVAIKRIGHNS-QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLL  404 (653)
Q Consensus       331 ~f~~~~~LG~G~fg~Vy~~~~~~-----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  404 (653)
                      +|...+.||+|+||.||+|....     ....+++|.+.... ....+.+.+|+..+++++||||+++++.|...+..++
T Consensus         1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l   80 (290)
T cd05045           1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLL   80 (290)
T ss_pred             CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEE
Confidence            36678899999999999998642     23578999886543 3445678999999999999999999999999999999


Q ss_pred             EEeccCCCCchhhhhcccc-------------------cccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCc
Q 048419          405 VYDYVPNGSLDKLLFDKDH-------------------KLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSN  465 (653)
Q Consensus       405 V~E~~~~gsL~~~l~~~~~-------------------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~N  465 (653)
                      ++||+++++|.+++.....                   .....+++.+++.++.|++.||+|||+   ++++||||||+|
T Consensus        81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~---~~ivH~dikp~n  157 (290)
T cd05045          81 IVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAE---MKLVHRDLAARN  157 (290)
T ss_pred             EEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHH---CCeehhhhhhhe
Confidence            9999999999999865311                   012358899999999999999999999   999999999999


Q ss_pred             EEEcCCCcEEEEeecCcccccCCCC-CcccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhh
Q 048419          466 ILLDTYLNAKLGDFGLAKIYEHGAN-PQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAA  543 (653)
Q Consensus       466 Ill~~~~~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~  543 (653)
                      ||+++++.+||+|||+++....... .......++..|+|||.+.+..++.++||||||++++||++ |+.||.......
T Consensus       158 ill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~  237 (290)
T cd05045         158 VLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPER  237 (290)
T ss_pred             EEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHHH
Confidence            9999999999999999986533221 11122345678999999988889999999999999999998 999986543221


Q ss_pred             HHHHHHHHHhhhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          544 ELLLVDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       544 ~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                         +.+.+.....            ...+......+.+++.+||+.+|.+||++.|+++.|+.
T Consensus       238 ---~~~~~~~~~~------------~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~  285 (290)
T cd05045         238 ---LFNLLKTGYR------------MERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEK  285 (290)
T ss_pred             ---HHHHHhCCCC------------CCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHH
Confidence               1222111110            00111234578899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=100.00  E-value=6.6e-37  Score=309.41  Aligned_cols=247  Identities=25%  Similarity=0.398  Sum_probs=199.3

Q ss_pred             eeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc-hhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEeccCCCCc
Q 048419          336 NLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS-QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSL  414 (653)
Q Consensus       336 ~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL  414 (653)
                      ++||+|+||.||+|... ++..+|+|.+.... ......+.+|++.+++++|+||++++++|...+..++||||+++++|
T Consensus         1 ~~ig~g~~g~vy~~~~~-~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   79 (250)
T cd05085           1 ELLGKGNFGEVFKGTLK-DKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDF   79 (250)
T ss_pred             CccCCCCCceEEEEEec-CCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcH
Confidence            36999999999999875 57889999986553 33345788999999999999999999999999999999999999999


Q ss_pred             hhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCCCCccc
Q 048419          415 DKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTT  494 (653)
Q Consensus       415 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~  494 (653)
                      .+++....    ..+++.+++.++.|++.+|.|||+   ++++|+||||+||+++.++.+||+|||++............
T Consensus        80 ~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~---~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~  152 (250)
T cd05085          80 LSFLRKKK----DELKTKQLVKFALDAAAGMAYLES---KNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSG  152 (250)
T ss_pred             HHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccChheEEEcCCCeEEECCCccceeccccccccCC
Confidence            99986543    347899999999999999999999   89999999999999999999999999998764433222222


Q ss_pred             ccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhccCcCCH
Q 048419          495 HIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYYDL  573 (653)
Q Consensus       495 ~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~  573 (653)
                      ...++..|+|||++.+..++.++||||||+++|||++ |..||........   ...+..    +.       .. ....
T Consensus       153 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~---~~~~~~----~~-------~~-~~~~  217 (250)
T cd05085         153 LKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQA---REQVEK----GY-------RM-SCPQ  217 (250)
T ss_pred             CCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHH---HHHHHc----CC-------CC-CCCC
Confidence            2344668999999998899999999999999999998 9999875433211   111111    10       00 1111


Q ss_pred             HHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          574 AEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       574 ~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                      .....+.+++.+|++.+|++||++.|+++.|.
T Consensus       218 ~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~  249 (250)
T cd05085         218 KCPDDVYKVMQRCWDYKPENRPKFSELQKELA  249 (250)
T ss_pred             CCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence            23467899999999999999999999999885

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=100.00  E-value=7.7e-37  Score=315.71  Aligned_cols=252  Identities=26%  Similarity=0.358  Sum_probs=202.3

Q ss_pred             cCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc---hhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEec
Q 048419          332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS---QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDY  408 (653)
Q Consensus       332 f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~  408 (653)
                      |+..+.||+|+||+||++.+..+++.+|+|.+....   ......+.+|++++++++|+|++++.+.+...+..++||||
T Consensus         2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~   81 (285)
T cd05632           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI   81 (285)
T ss_pred             ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence            666789999999999999999889999999986532   22345678899999999999999999999999999999999


Q ss_pred             cCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCC
Q 048419          409 VPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHG  488 (653)
Q Consensus       409 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~  488 (653)
                      +++++|.+++....   ...+++..+..++.|++.||.|||+   ++|+||||||+||++++++.+||+|||++......
T Consensus        82 ~~~~~L~~~~~~~~---~~~~~~~~~~~~~~ql~~~l~~lH~---~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~  155 (285)
T cd05632          82 MNGGDLKFHIYNMG---NPGFEEERALFYAAEILCGLEDLHR---ENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEG  155 (285)
T ss_pred             ccCccHHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecCCCHHHEEECCCCCEEEecCCcceecCCC
Confidence            99999998886543   2358999999999999999999999   89999999999999999999999999999765332


Q ss_pred             CCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhcc
Q 048419          489 ANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTL  568 (653)
Q Consensus       489 ~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l  568 (653)
                      .  ......|+..|+|||++.+..++.++|+|||||++|||++|+.||...........   +........         
T Consensus       156 ~--~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~---~~~~~~~~~---------  221 (285)
T cd05632         156 E--SIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREE---VDRRVLETE---------  221 (285)
T ss_pred             C--cccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHH---HHHhhhccc---------
Confidence            1  12334689999999999888899999999999999999999999976443221110   111000000         


Q ss_pred             CcCCHHHHHHHHHHHHHcCCCCCCCCCC-----HHHHHHH
Q 048419          569 DYYDLAEAELVLNLGLFCSAPNPVYRPD-----MRRVVEF  603 (653)
Q Consensus       569 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs-----~~evl~~  603 (653)
                      ..+.......+.+|+..||+.||.+||+     +.+++++
T Consensus       222 ~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~  261 (285)
T cd05632         222 EVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRH  261 (285)
T ss_pred             cccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcC
Confidence            0111123456789999999999999999     6666654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=100.00  E-value=7.5e-37  Score=321.62  Aligned_cols=248  Identities=23%  Similarity=0.321  Sum_probs=198.7

Q ss_pred             CcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC---chhhHHHHHHHHHHHhhcC-CCceeeeeeeecccceeEEEE
Q 048419          331 GFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN---SQQGMKEFVAEIMSMGRLR-HRNLVQLHGWCRKQDELLLVY  406 (653)
Q Consensus       331 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lV~  406 (653)
                      +|+..+.||+|+||.||+|....+++.||+|++...   .....+.+..|..++..+. |++|+++++++...+.+++||
T Consensus         1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (323)
T cd05615           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM   80 (323)
T ss_pred             CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence            367789999999999999999989999999998653   2234556788888888886 577888999999999999999


Q ss_pred             eccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccccc
Q 048419          407 DYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE  486 (653)
Q Consensus       407 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~  486 (653)
                      ||+++|+|.+++...     ..+++.+++.++.||+.||.|||+   ++|+||||||+|||+++++.+||+|||+++...
T Consensus        81 Ey~~~g~L~~~i~~~-----~~l~~~~~~~i~~qi~~al~~lH~---~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~  152 (323)
T cd05615          81 EYVNGGDLMYHIQQV-----GKFKEPQAVFYAAEISVGLFFLHR---RGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHM  152 (323)
T ss_pred             cCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEEeccccccccC
Confidence            999999999988654     348899999999999999999999   899999999999999999999999999987543


Q ss_pred             CCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhh
Q 048419          487 HGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQ  566 (653)
Q Consensus       487 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  566 (653)
                      ... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.......   +...+..    ..       
T Consensus       153 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~---~~~~i~~----~~-------  217 (323)
T cd05615         153 VDG-VTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDE---LFQSIME----HN-------  217 (323)
T ss_pred             CCC-ccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHH---HHHHHHh----CC-------
Confidence            221 12233568999999999998889999999999999999999999997654321   1111111    00       


Q ss_pred             ccCcCCHHHHHHHHHHHHHcCCCCCCCCCCH-----HHHHHH
Q 048419          567 TLDYYDLAEAELVLNLGLFCSAPNPVYRPDM-----RRVVEF  603 (653)
Q Consensus       567 ~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~-----~evl~~  603 (653)
                       . .++......+.+++.+||+.+|.+|++.     .++.++
T Consensus       218 -~-~~p~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h  257 (323)
T cd05615         218 -V-SYPKSLSKEAVSICKGLMTKHPSKRLGCGPEGERDIREH  257 (323)
T ss_pred             -C-CCCccCCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcC
Confidence             0 1111224567899999999999999984     455544

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=100.00  E-value=3.2e-37  Score=329.48  Aligned_cols=254  Identities=21%  Similarity=0.295  Sum_probs=200.0

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC---chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN---SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVY  406 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  406 (653)
                      ++|+..+.||+|+||.||++....+++.||||++...   .......+..|+.++.+++|+||+++++.+.+.+.+++||
T Consensus         1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~   80 (360)
T cd05627           1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM   80 (360)
T ss_pred             CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence            4688899999999999999999989999999998643   2334567888999999999999999999999999999999


Q ss_pred             eccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccccc
Q 048419          407 DYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE  486 (653)
Q Consensus       407 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~  486 (653)
                      ||+++|+|.+++...     ..+++..+..++.|++.||.|||+   ++|+||||||+|||++.++.+||+|||+++...
T Consensus        81 E~~~gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~~L~~lH~---~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~  152 (360)
T cd05627          81 EFLPGGDMMTLLMKK-----DTLSEEATQFYIAETVLAIDAIHQ---LGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLK  152 (360)
T ss_pred             eCCCCccHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeEccCCCHHHEEECCCCCEEEeeccCCcccc
Confidence            999999999998754     348899999999999999999999   999999999999999999999999999987542


Q ss_pred             CCCC----------------------------------CcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhC
Q 048419          487 HGAN----------------------------------PQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACG  532 (653)
Q Consensus       487 ~~~~----------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG  532 (653)
                      ....                                  .......||+.|+|||++.+..++.++|||||||++|||++|
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG  232 (360)
T cd05627         153 KAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIG  232 (360)
T ss_pred             cccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccC
Confidence            2100                                  001134699999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCC---HHHHHHHH
Q 048419          533 RRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPD---MRRVVEFL  604 (653)
Q Consensus       533 ~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs---~~evl~~L  604 (653)
                      +.||.........   ..+...  ...+  .+.+   .  ......+.+++.+|+ .||.+|++   +.|++++-
T Consensus       233 ~~Pf~~~~~~~~~---~~i~~~--~~~~--~~p~---~--~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~hp  294 (360)
T cd05627         233 YPPFCSETPQETY---RKVMNW--KETL--VFPP---E--VPISEKAKDLILRFC-TDSENRIGSNGVEEIKSHP  294 (360)
T ss_pred             CCCCCCCCHHHHH---HHHHcC--CCce--ecCC---C--CCCCHHHHHHHHHhc-cChhhcCCCCCHHHHhcCC
Confidence            9999765432211   001000  0000  0000   0  012345667777766 49999985   67777764

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=100.00  E-value=5.6e-37  Score=318.54  Aligned_cols=252  Identities=24%  Similarity=0.349  Sum_probs=207.3

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEecc
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYV  409 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~  409 (653)
                      ++|+..+.||+|++|.||+|+...++..|++|.+........+.+.+|+.++++++|+|++++++.+......++||||+
T Consensus        20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~   99 (296)
T cd06654          20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL   99 (296)
T ss_pred             cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeeccc
Confidence            47888899999999999999998889999999997765556678899999999999999999999999999999999999


Q ss_pred             CCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCC
Q 048419          410 PNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGA  489 (653)
Q Consensus       410 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~  489 (653)
                      ++++|.+++.+.      .+++.++..++.|++.||.|||+   .+|+|+||||+||+++.++.+||+|||++.......
T Consensus       100 ~~~~L~~~~~~~------~~~~~~~~~i~~ql~~aL~~LH~---~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~  170 (296)
T cd06654         100 AGGSLTDVVTET------CMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ  170 (296)
T ss_pred             CCCCHHHHHHhc------CCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEcCCCCEEECccccchhccccc
Confidence            999999998543      37888999999999999999999   899999999999999999999999999988654322


Q ss_pred             CCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhccC
Q 048419          490 NPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLD  569 (653)
Q Consensus       490 ~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~  569 (653)
                      . ......+++.|+|||.+.+..++.++|||||||++|||++|+.||.........  ..+..    .+.      +.+ 
T Consensus       171 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~--~~~~~----~~~------~~~-  236 (296)
T cd06654         171 S-KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRAL--YLIAT----NGT------PEL-  236 (296)
T ss_pred             c-ccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhH--HHHhc----CCC------CCC-
Confidence            1 122346888999999998888999999999999999999999999765432211  11100    000      000 


Q ss_pred             cCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          570 YYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       570 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                      .........+.+++.+||..+|.+||++.+++++-
T Consensus       237 ~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~~  271 (296)
T cd06654         237 QNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQ  271 (296)
T ss_pred             CCccccCHHHHHHHHHHCcCCcccCcCHHHHhhCh
Confidence            01112345688999999999999999999999853

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=100.00  E-value=1.4e-36  Score=309.80  Aligned_cols=259  Identities=24%  Similarity=0.403  Sum_probs=210.0

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC---chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN---SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVY  406 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  406 (653)
                      ++|+..+.||+|+||.||+|....+|+.||+|.++..   .....+.+.+|++++++++|+|++++++++...+..++||
T Consensus         2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~   81 (267)
T cd08224           2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL   81 (267)
T ss_pred             CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence            5788899999999999999999888999999988642   2334668899999999999999999999999999999999


Q ss_pred             eccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccccc
Q 048419          407 DYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE  486 (653)
Q Consensus       407 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~  486 (653)
                      ||+++++|.+++..... ....+++.+++.++.|++.||.|||+   .+++|+||+|+||+++.++.++|+|||++....
T Consensus        82 e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~  157 (267)
T cd08224          82 ELADAGDLSRMIKHFKK-QKRLIPERTIWKYFVQLCSALEHMHS---KRIMHRDIKPANVFITATGVVKLGDLGLGRFFS  157 (267)
T ss_pred             ecCCCCCHHHHHHHhcc-cCCCcCHHHHHHHHHHHHHHHHHHHh---CCEecCCcChhhEEECCCCcEEEeccceeeecc
Confidence            99999999999865321 13458899999999999999999999   899999999999999999999999999988654


Q ss_pred             CCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhh
Q 048419          487 HGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQ  566 (653)
Q Consensus       487 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  566 (653)
                      .... ......++..|+|||.+.+..++.++|||||||++|||++|+.|+......    +.+..... ..+.       
T Consensus       158 ~~~~-~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----~~~~~~~~-~~~~-------  224 (267)
T cd08224         158 SKTT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN----LYSLCKKI-EKCD-------  224 (267)
T ss_pred             CCCc-ccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCcc----HHHHHhhh-hcCC-------
Confidence            3221 122346788999999998888999999999999999999999998643321    11111110 0010       


Q ss_pred             ccCcCCH-HHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          567 TLDYYDL-AEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       567 ~l~~~~~-~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                       ....+. .....+.+++.+||+.+|.+||++.+|+++|+.
T Consensus       225 -~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~  264 (267)
T cd08224         225 -YPPLPADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKE  264 (267)
T ss_pred             -CCCCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHH
Confidence             011111 234578899999999999999999999999865

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=100.00  E-value=8e-37  Score=314.51  Aligned_cols=252  Identities=23%  Similarity=0.325  Sum_probs=201.1

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC-chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEec
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN-SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDY  408 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~  408 (653)
                      ++|+..++||+|+||.||+|.+..++..||+|.+... .....+.+.+|++++++++||||+++++++...+..++||||
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   80 (279)
T cd06619           1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEF   80 (279)
T ss_pred             CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEec
Confidence            3577789999999999999999888999999998654 344456789999999999999999999999999999999999


Q ss_pred             cCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCC
Q 048419          409 VPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHG  488 (653)
Q Consensus       409 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~  488 (653)
                      +++++|..+.         .+++..+..++.|++.||.|||+   .+|+|+||||+|||++.++.+||+|||++......
T Consensus        81 ~~~~~l~~~~---------~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~  148 (279)
T cd06619          81 MDGGSLDVYR---------KIPEHVLGRIAVAVVKGLTYLWS---LKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS  148 (279)
T ss_pred             CCCCChHHhh---------cCCHHHHHHHHHHHHHHHHHHHH---CCEeeCCCCHHHEEECCCCCEEEeeCCcceecccc
Confidence            9999996542         25777888999999999999999   99999999999999999999999999999865432


Q ss_pred             CCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHH-HHHHHHhhhcccchhHhhhhc
Q 048419          489 ANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELL-LVDWVKELHLEGEITQAIDQT  567 (653)
Q Consensus       489 ~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~-l~~~~~~~~~~~~~~~~~d~~  567 (653)
                         ......|+..|+|||.+.+..++.++|||||||++|||++|+.||.......... ........ ...     ..+.
T Consensus       149 ---~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~-~~~-----~~~~  219 (279)
T cd06619         149 ---IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCI-VDE-----DPPV  219 (279)
T ss_pred             ---cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHH-hcc-----CCCC
Confidence               1223478899999999998889999999999999999999999997533221110 00000000 000     0011


Q ss_pred             cCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          568 LDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       568 l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                      +  ........+.+++.+||+.+|.+||++.|++++.
T Consensus       220 ~--~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~~  254 (279)
T cd06619         220 L--PVGQFSEKFVHFITQCMRKQPKERPAPENLMDHP  254 (279)
T ss_pred             C--CCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcCc
Confidence            1  0111235688999999999999999999999864

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=100.00  E-value=5e-37  Score=319.04  Aligned_cols=257  Identities=26%  Similarity=0.393  Sum_probs=202.4

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCc--EEEEEEeccC-chhhHHHHHHHHHHHhhc-CCCceeeeeeeecccceeEEE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGL--EVAIKRIGHN-SQQGMKEFVAEIMSMGRL-RHRNLVQLHGWCRKQDELLLV  405 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~--~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV  405 (653)
                      ++|+..+.||+|+||.||+|....++.  .+++|.++.. .....+.+.+|+++++++ +||||+++++++...+..++|
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv   81 (297)
T cd05089           2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA   81 (297)
T ss_pred             ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence            568889999999999999999876654  4788888643 344567789999999999 799999999999999999999


Q ss_pred             EeccCCCCchhhhhccccc-----------ccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcE
Q 048419          406 YDYVPNGSLDKLLFDKDHK-----------LRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNA  474 (653)
Q Consensus       406 ~E~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~  474 (653)
                      +||+++++|.+++......           ....+++.+++.++.|++.||+|||+   ++++||||||+|||+++++.+
T Consensus        82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~---~~ivH~dlkp~Nill~~~~~~  158 (297)
T cd05089          82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSE---KQFIHRDLAARNVLVGENLAS  158 (297)
T ss_pred             EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCcCCcceEEECCCCeE
Confidence            9999999999999754210           11358899999999999999999999   899999999999999999999


Q ss_pred             EEEeecCcccccCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHh
Q 048419          475 KLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKE  553 (653)
Q Consensus       475 kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~  553 (653)
                      ||+|||++.......  .......+..|+|||.+.+..++.++|||||||++|||++ |+.||.......   +.+.+. 
T Consensus       159 kl~dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~---~~~~~~-  232 (297)
T cd05089         159 KIADFGLSRGEEVYV--KKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAE---LYEKLP-  232 (297)
T ss_pred             EECCcCCCcccccee--ccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH---HHHHHh-
Confidence            999999986432211  1111223457999999988889999999999999999997 999997544321   111110 


Q ss_pred             hhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          554 LHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       554 ~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                         .+.     .   ...+......+.+++.+||+.+|.+||++.++++.|+.
T Consensus       233 ---~~~-----~---~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  274 (297)
T cd05089         233 ---QGY-----R---MEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSR  274 (297)
T ss_pred             ---cCC-----C---CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence               000     0   00111234568899999999999999999999988754

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=100.00  E-value=5.2e-38  Score=299.14  Aligned_cols=255  Identities=25%  Similarity=0.364  Sum_probs=208.4

Q ss_pred             hhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc--------hhhHHHHHHHHHHHhhc-CCCceeeeeeeecc
Q 048419          328 VTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS--------QQGMKEFVAEIMSMGRL-RHRNLVQLHGWCRK  398 (653)
Q Consensus       328 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~  398 (653)
                      .-+.|...+.||+|..+.|-++.++.+|..+|+|++....        .+-.+.-.+|+.+|+++ -||+|+++.++++.
T Consensus        15 fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes   94 (411)
T KOG0599|consen   15 FYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYES   94 (411)
T ss_pred             HHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccC
Confidence            3456788899999999999999999999999999985431        11234556799999998 59999999999999


Q ss_pred             cceeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEe
Q 048419          399 QDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGD  478 (653)
Q Consensus       399 ~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D  478 (653)
                      ...+++|+|.|+.|.|.++|...     -.++++..++|.+|+..|++|||.   +.||||||||+|||+|++.++||+|
T Consensus        95 ~sF~FlVFdl~prGELFDyLts~-----VtlSEK~tR~iMrqlfegVeylHa---~~IVHRDLKpENILlddn~~i~isD  166 (411)
T KOG0599|consen   95 DAFVFLVFDLMPRGELFDYLTSK-----VTLSEKETRRIMRQLFEGVEYLHA---RNIVHRDLKPENILLDDNMNIKISD  166 (411)
T ss_pred             cchhhhhhhhcccchHHHHhhhh-----eeecHHHHHHHHHHHHHHHHHHHH---hhhhhcccChhheeeccccceEEec
Confidence            99999999999999999999764     358999999999999999999999   9999999999999999999999999


Q ss_pred             ecCcccccCCCCCcccccccCCcccCcccccc------CCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHH
Q 048419          479 FGLAKIYEHGANPQTTHIVGTLGYLAPELTRT------GKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVK  552 (653)
Q Consensus       479 fGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~  552 (653)
                      ||+++.+..+.  .....+||++|+|||.+..      ..|+...|+|++||+||.|+.|.+||-.......+   ..+ 
T Consensus       167 FGFa~~l~~Ge--kLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlML---R~I-  240 (411)
T KOG0599|consen  167 FGFACQLEPGE--KLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLML---RMI-  240 (411)
T ss_pred             cceeeccCCch--hHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHH---HHH-
Confidence            99999876543  4567899999999998864      35788999999999999999999999765442111   111 


Q ss_pred             hhhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          553 ELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       553 ~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                         .+|+.. .-.+    .=.+......+|+.+||+.||.+|.|++|++++-
T Consensus       241 ---meGkyq-F~sp----eWadis~~~KdLIsrlLqVdp~~Ritake~LaHp  284 (411)
T KOG0599|consen  241 ---MEGKYQ-FRSP----EWADISATVKDLISRLLQVDPTKRITAKEALAHP  284 (411)
T ss_pred             ---Hhcccc-cCCc----chhhccccHHHHHHHHHeeCchhcccHHHHhcCh
Confidence               111100 0000    0012346688999999999999999999999755

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=100.00  E-value=5.5e-37  Score=319.72  Aligned_cols=257  Identities=28%  Similarity=0.420  Sum_probs=202.2

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCc--EEEEEEeccC-chhhHHHHHHHHHHHhhc-CCCceeeeeeeecccceeEEE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGL--EVAIKRIGHN-SQQGMKEFVAEIMSMGRL-RHRNLVQLHGWCRKQDELLLV  405 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~--~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV  405 (653)
                      ++|+..+.||+|+||.||+|.+..++.  .+++|.+... .....+.+.+|++++.++ +|+||+++++++...+..++|
T Consensus         7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv   86 (303)
T cd05088           7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA   86 (303)
T ss_pred             hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEE
Confidence            467888999999999999999876665  4578777543 344566888999999999 899999999999999999999


Q ss_pred             EeccCCCCchhhhhccccc-----------ccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcE
Q 048419          406 YDYVPNGSLDKLLFDKDHK-----------LRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNA  474 (653)
Q Consensus       406 ~E~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~  474 (653)
                      +||+++++|.+++......           ....+++.+++.++.|++.||+|||+   ++++||||||+|||++.++.+
T Consensus        87 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~---~gi~H~dlkp~Nili~~~~~~  163 (303)
T cd05088          87 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVA  163 (303)
T ss_pred             EEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHh---CCccccccchheEEecCCCcE
Confidence            9999999999999754311           12358899999999999999999999   999999999999999999999


Q ss_pred             EEEeecCcccccCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHh
Q 048419          475 KLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKE  553 (653)
Q Consensus       475 kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~  553 (653)
                      ||+|||++......  .......++..|+|||.+.+..++.++|||||||++|||+| |..||......+   ..+.+..
T Consensus       164 kl~dfg~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~---~~~~~~~  238 (303)
T cd05088         164 KIADFGLSRGQEVY--VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE---LYEKLPQ  238 (303)
T ss_pred             EeCccccCcccchh--hhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHH---HHHHHhc
Confidence            99999998643211  11112234568999999988889999999999999999998 999986543321   1111110


Q ss_pred             hhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          554 LHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       554 ~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                          +.       .. .........+.+|+.+||+.+|.+||++.++++.|+.
T Consensus       239 ----~~-------~~-~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~  279 (303)
T cd05088         239 ----GY-------RL-EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNR  279 (303)
T ss_pred             ----CC-------cC-CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence                00       00 0111224568899999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=100.00  E-value=5.7e-37  Score=323.12  Aligned_cols=251  Identities=22%  Similarity=0.281  Sum_probs=197.9

Q ss_pred             eeeeeeCcEEEEEEEeCCCCcEEEEEEeccC---chhhHHHHHHHHHHHhhc-CCCceeeeeeeecccceeEEEEeccCC
Q 048419          336 NLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN---SQQGMKEFVAEIMSMGRL-RHRNLVQLHGWCRKQDELLLVYDYVPN  411 (653)
Q Consensus       336 ~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~E~~~~  411 (653)
                      ++||+|+||.||+|....+++.||+|++...   .....+.+..|+.++.++ +|+||+++++++...+.+++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   80 (327)
T cd05617           1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG   80 (327)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence            4699999999999999999999999999754   233456688999999888 699999999999999999999999999


Q ss_pred             CCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCCCC
Q 048419          412 GSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANP  491 (653)
Q Consensus       412 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~  491 (653)
                      |+|..++...     ..+++..+..++.||+.||+|||+   ++|+||||||+|||++.++.+||+|||+++..... ..
T Consensus        81 ~~L~~~~~~~-----~~l~~~~~~~~~~qi~~al~~lH~---~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~-~~  151 (327)
T cd05617          81 GDLMFHMQRQ-----RKLPEEHARFYAAEICIALNFLHE---RGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGP-GD  151 (327)
T ss_pred             CcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEEeCCCCEEEeccccceeccCC-CC
Confidence            9999888653     348999999999999999999999   89999999999999999999999999998753221 12


Q ss_pred             cccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhccCcC
Q 048419          492 QTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYY  571 (653)
Q Consensus       492 ~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~  571 (653)
                      ......||+.|+|||++.+..++.++|||||||++|||++|+.||............+++........         ...
T Consensus       152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~---------~~~  222 (327)
T cd05617         152 TTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKP---------IRI  222 (327)
T ss_pred             ceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCC---------CCC
Confidence            22345789999999999999999999999999999999999999964322111111111111111100         011


Q ss_pred             CHHHHHHHHHHHHHcCCCCCCCCCC------HHHHHHHH
Q 048419          572 DLAEAELVLNLGLFCSAPNPVYRPD------MRRVVEFL  604 (653)
Q Consensus       572 ~~~~~~~l~~l~~~Cl~~dP~~RPs------~~evl~~L  604 (653)
                      +......+.+++.+||+.||.+||+      +.+++++-
T Consensus       223 p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~  261 (327)
T cd05617         223 PRFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSHT  261 (327)
T ss_pred             CCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcCC
Confidence            1122356789999999999999998      45776653

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=100.00  E-value=6.7e-37  Score=316.22  Aligned_cols=252  Identities=27%  Similarity=0.365  Sum_probs=203.0

Q ss_pred             cCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc---hhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEec
Q 048419          332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS---QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDY  408 (653)
Q Consensus       332 f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~  408 (653)
                      |+..+.||+|+||.||++....+++.||||.+....   ....+.+.+|+.++++++|+|++++++.+.+.+..++||||
T Consensus         2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~   81 (285)
T cd05630           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL   81 (285)
T ss_pred             ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence            667889999999999999999999999999986532   22345677899999999999999999999999999999999


Q ss_pred             cCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCC
Q 048419          409 VPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHG  488 (653)
Q Consensus       409 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~  488 (653)
                      +++++|.+++....   ...+++.++..++.|++.||.|||+   ++|+||||||+||+++.++.++|+|||++......
T Consensus        82 ~~g~~L~~~l~~~~---~~~l~~~~~~~~~~qi~~~l~~lH~---~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~  155 (285)
T cd05630          82 MNGGDLKFHIYHMG---EAGFEEGRAVFYAAEICCGLEDLHQ---ERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG  155 (285)
T ss_pred             cCCCcHHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCCCHHHEEECCCCCEEEeeccceeecCCC
Confidence            99999999886543   2458899999999999999999999   99999999999999999999999999998765432


Q ss_pred             CCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHH-HHHHHHHhhhcccchhHhhhhc
Q 048419          489 ANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAEL-LLVDWVKELHLEGEITQAIDQT  567 (653)
Q Consensus       489 ~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~d~~  567 (653)
                      .  ......|+..|+|||.+.+..++.++|||||||++|||++|+.||......... ........      ..    . 
T Consensus       156 ~--~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~------~~----~-  222 (285)
T cd05630         156 Q--TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKE------VQ----E-  222 (285)
T ss_pred             c--cccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhh------hh----h-
Confidence            2  112346899999999999889999999999999999999999999754321100 00000000      00    0 


Q ss_pred             cCcCCHHHHHHHHHHHHHcCCCCCCCCCC-----HHHHHHHH
Q 048419          568 LDYYDLAEAELVLNLGLFCSAPNPVYRPD-----MRRVVEFL  604 (653)
Q Consensus       568 l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs-----~~evl~~L  604 (653)
                        .........+.+|+..||+.||.+||+     +.|++++-
T Consensus       223 --~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~  262 (285)
T cd05630         223 --EYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHP  262 (285)
T ss_pred             --hcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcCh
Confidence              011112356789999999999999999     88988754

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=100.00  E-value=4.1e-37  Score=321.53  Aligned_cols=268  Identities=22%  Similarity=0.292  Sum_probs=204.0

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc-hhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEec
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS-QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDY  408 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~  408 (653)
                      ++|...+.||+|+||.||+|....++..||+|++.... ......+.+|++++++++|+||+++++++...+..++||||
T Consensus         6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   85 (309)
T cd07872           6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY   85 (309)
T ss_pred             CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence            46888999999999999999998889999999986543 22344677899999999999999999999999999999999


Q ss_pred             cCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCC
Q 048419          409 VPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHG  488 (653)
Q Consensus       409 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~  488 (653)
                      +++ +|.+++....    ..+++..+..++.||+.||.|||+   ++|+||||||+||+++.++.+||+|||+++.....
T Consensus        86 ~~~-~l~~~~~~~~----~~~~~~~~~~~~~qi~~aL~~lH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~  157 (309)
T cd07872          86 LDK-DLKQYMDDCG----NIMSMHNVKIFLYQILRGLAYCHR---RKVLHRDLKPQNLLINERGELKLADFGLARAKSVP  157 (309)
T ss_pred             CCC-CHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEECccccceecCCC
Confidence            975 8888876542    347888999999999999999999   99999999999999999999999999999764332


Q ss_pred             CCCcccccccCCcccCcccccc-CCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHh----
Q 048419          489 ANPQTTHIVGTLGYLAPELTRT-GKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQA----  563 (653)
Q Consensus       489 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~----  563 (653)
                      .. ......++..|+|||.+.+ ..++.++|||||||++|||++|+.||......+....................    
T Consensus       158 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (309)
T cd07872         158 TK-TYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSND  236 (309)
T ss_pred             cc-ccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchh
Confidence            21 1223467889999998865 46889999999999999999999999765543322211111100000000000    


Q ss_pred             --hhhccCc--------CCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          564 --IDQTLDY--------YDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       564 --~d~~l~~--------~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                        .+.....        ........+.+++.+||+.||.+|||+.|++++-.-
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~  289 (309)
T cd07872         237 EFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYF  289 (309)
T ss_pred             hhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhh
Confidence              0000000        001123567899999999999999999999986543

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=100.00  E-value=3.1e-37  Score=315.87  Aligned_cols=256  Identities=26%  Similarity=0.373  Sum_probs=203.7

Q ss_pred             HHhhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhc-CCCceeeeeeeeccc-----
Q 048419          326 ASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRL-RHRNLVQLHGWCRKQ-----  399 (653)
Q Consensus       326 ~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~-----  399 (653)
                      +.+++.|+..+.||+|+||.||+|....+++.||+|++.... .....+.+|+.+++++ +|+|++++++++...     
T Consensus         2 ~~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~   80 (272)
T cd06637           2 RDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGM   80 (272)
T ss_pred             CChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCC
Confidence            346778888999999999999999999889999999986543 3346788999999998 699999999998653     


Q ss_pred             -ceeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEe
Q 048419          400 -DELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGD  478 (653)
Q Consensus       400 -~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D  478 (653)
                       ..+++||||+++++|.+++....   ...+++..+..++.|++.||+|||+   ++|+|+||||+||++++++.+||+|
T Consensus        81 ~~~~~iv~e~~~~~~L~~~l~~~~---~~~l~~~~~~~~~~qi~~~l~~LH~---~~ivh~dl~~~nili~~~~~~~l~D  154 (272)
T cd06637          81 DDQLWLVMEFCGAGSVTDLIKNTK---GNTLKEEWIAYICREILRGLSHLHQ---HKVIHRDIKGQNVLLTENAEVKLVD  154 (272)
T ss_pred             CcEEEEEEEcCCCCcHHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCCHHHEEECCCCCEEEcc
Confidence             46899999999999999987643   2458899999999999999999999   8999999999999999999999999


Q ss_pred             ecCcccccCCCCCcccccccCCcccCccccc-----cCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHh
Q 048419          479 FGLAKIYEHGANPQTTHIVGTLGYLAPELTR-----TGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKE  553 (653)
Q Consensus       479 fGla~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~  553 (653)
                      ||++....... .......|+..|+|||++.     ...++.++|||||||++|||++|+.|+...........   .. 
T Consensus       155 fg~~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~---~~-  229 (272)
T cd06637         155 FGVSAQLDRTV-GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFL---IP-  229 (272)
T ss_pred             CCCceeccccc-ccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHH---Hh-
Confidence            99998654322 1223356889999999986     33578899999999999999999999975433211110   00 


Q ss_pred             hhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 048419          554 LHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEF  603 (653)
Q Consensus       554 ~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  603 (653)
                         ...     ...+  ........+.+++.+||+.+|.+||++.+++++
T Consensus       230 ---~~~-----~~~~--~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~  269 (272)
T cd06637         230 ---RNP-----APRL--KSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKH  269 (272)
T ss_pred             ---cCC-----CCCC--CCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhC
Confidence               000     0001  011223568899999999999999999999874

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=100.00  E-value=3.1e-37  Score=317.98  Aligned_cols=257  Identities=24%  Similarity=0.368  Sum_probs=202.9

Q ss_pred             cCcceeeeeeCcEEEEEEEeCC-----CCcEEEEEEeccCch-hhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEE
Q 048419          332 FGEQNLVGSGGFGRVYRGLMPS-----LGLEVAIKRIGHNSQ-QGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLV  405 (653)
Q Consensus       332 f~~~~~LG~G~fg~Vy~~~~~~-----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV  405 (653)
                      |...+.||+|+||.||+|....     .+..||||++..... ...+.+..|+.++++++|+||+++++++...+..+++
T Consensus         7 ~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~~   86 (283)
T cd05091           7 VRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSMI   86 (283)
T ss_pred             HHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEEE
Confidence            5557789999999999998753     257899999975533 3346788999999999999999999999999999999


Q ss_pred             EeccCCCCchhhhhcccc-----------cccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcE
Q 048419          406 YDYVPNGSLDKLLFDKDH-----------KLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNA  474 (653)
Q Consensus       406 ~E~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~  474 (653)
                      +||+++++|.+++.....           .....+++..+++++.|++.||.|||+   ++++||||||+||++++++.+
T Consensus        87 ~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~---~gi~H~dlkp~Nil~~~~~~~  163 (283)
T cd05091          87 FSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSS---HHVVHKDLATRNVLVFDKLNV  163 (283)
T ss_pred             EEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHH---cCccccccchhheEecCCCce
Confidence            999999999999853211           112357888999999999999999999   899999999999999999999


Q ss_pred             EEEeecCcccccCCCC-CcccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHH
Q 048419          475 KLGDFGLAKIYEHGAN-PQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVK  552 (653)
Q Consensus       475 kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~  552 (653)
                      ||+|||+++....... .......+++.|+|||.+.+..++.++|||||||++|||++ |..|+......+   ..+.+.
T Consensus       164 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~---~~~~i~  240 (283)
T cd05091         164 KISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQD---VIEMIR  240 (283)
T ss_pred             EecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHH---HHHHHH
Confidence            9999999886543221 11223345778999999988889999999999999999998 778886543321   111111


Q ss_pred             hhhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          553 ELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       553 ~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                      .    +.        ...........+.+++..||+.+|.+||++.+|++.|+.
T Consensus       241 ~----~~--------~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~  282 (283)
T cd05091         241 N----RQ--------VLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT  282 (283)
T ss_pred             c----CC--------cCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence            1    11        111122345668899999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=100.00  E-value=6e-37  Score=313.77  Aligned_cols=256  Identities=24%  Similarity=0.371  Sum_probs=200.0

Q ss_pred             CcceeeeeeCcEEEEEEEeCCCCc--EEEEEEeccC--chhhHHHHHHHHHHHhhcCCCceeeeeeeeccc------cee
Q 048419          333 GEQNLVGSGGFGRVYRGLMPSLGL--EVAIKRIGHN--SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQ------DEL  402 (653)
Q Consensus       333 ~~~~~LG~G~fg~Vy~~~~~~~~~--~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~------~~~  402 (653)
                      ...+.||+|+||.||+|.....+.  .+|+|.++..  .....+.+..|+..+++++|+||++++++|...      ...
T Consensus         2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~   81 (272)
T cd05075           2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSP   81 (272)
T ss_pred             ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCc
Confidence            456789999999999999876664  6999988653  345567889999999999999999999987532      246


Q ss_pred             EEEEeccCCCCchhhhhccc-ccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecC
Q 048419          403 LLVYDYVPNGSLDKLLFDKD-HKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGL  481 (653)
Q Consensus       403 ~lV~E~~~~gsL~~~l~~~~-~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl  481 (653)
                      ++++||+++|+|.+++.... ......+++...+.++.|++.||+|||+   ++|+||||||+|||+++++.+||+|||+
T Consensus        82 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~  158 (272)
T cd05075          82 VVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSS---KSFIHRDLAARNCMLNENMNVCVADFGL  158 (272)
T ss_pred             EEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHH---CCeeccccchhheEEcCCCCEEECCCCc
Confidence            89999999999998874322 1113458999999999999999999999   8999999999999999999999999999


Q ss_pred             cccccCCCCC-cccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhhcccc
Q 048419          482 AKIYEHGANP-QTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELHLEGE  559 (653)
Q Consensus       482 a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~  559 (653)
                      ++........ ......+++.|+|||.+.+..++.++|||||||++|||++ |+.||.......   +.+.+..    +.
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~---~~~~~~~----~~  231 (272)
T cd05075         159 SKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSE---IYDYLRQ----GN  231 (272)
T ss_pred             ccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHH---HHHHHHc----CC
Confidence            9876432211 1122345678999999998899999999999999999999 788886543221   1111111    11


Q ss_pred             hhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          560 ITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       560 ~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                      ..        .........+.+++.+||+.+|.+|||+.++++.|+.
T Consensus       232 ~~--------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~  270 (272)
T cd05075         232 RL--------KQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEK  270 (272)
T ss_pred             CC--------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHh
Confidence            10        0111234568899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=100.00  E-value=3.7e-37  Score=324.34  Aligned_cols=244  Identities=25%  Similarity=0.305  Sum_probs=192.5

Q ss_pred             eeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc---hhhHHHHHHHH-HHHhhcCCCceeeeeeeecccceeEEEEeccCC
Q 048419          336 NLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS---QQGMKEFVAEI-MSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPN  411 (653)
Q Consensus       336 ~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~-~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~  411 (653)
                      +.||+|+||.||+|.+..+++.||+|++....   ......+..|. .+++.++|+||+++++++...+..++||||+++
T Consensus         1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~   80 (325)
T cd05602           1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING   80 (325)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence            46999999999999999889999999986432   22233444444 456788999999999999999999999999999


Q ss_pred             CCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCCCC
Q 048419          412 GSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANP  491 (653)
Q Consensus       412 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~  491 (653)
                      |+|.+++...     ..+++.....++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+++..... ..
T Consensus        81 ~~L~~~~~~~-----~~~~~~~~~~~~~qi~~~L~~lH~---~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~-~~  151 (325)
T cd05602          81 GELFYHLQRE-----RCFLEPRARFYAAEIASALGYLHS---LNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEH-NG  151 (325)
T ss_pred             CcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHeEECCCCCEEEccCCCCcccccC-CC
Confidence            9999998653     236778888899999999999999   99999999999999999999999999999754221 12


Q ss_pred             cccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhccCcC
Q 048419          492 QTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYY  571 (653)
Q Consensus       492 ~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~  571 (653)
                      ......||+.|+|||++.+..++.++|||||||++|||++|+.||.......   ..+.+..            ..+ ..
T Consensus       152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~---~~~~i~~------------~~~-~~  215 (325)
T cd05602         152 TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAE---MYDNILN------------KPL-QL  215 (325)
T ss_pred             CcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHH---HHHHHHh------------CCc-CC
Confidence            2334579999999999999899999999999999999999999997644321   1111110            000 01


Q ss_pred             CHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          572 DLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       572 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                      .......+.+++.+||+.+|.+||++.+.+..+
T Consensus       216 ~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~i  248 (325)
T cd05602         216 KPNITNSARHLLEGLLQKDRTKRLGAKDDFMEI  248 (325)
T ss_pred             CCCCCHHHHHHHHHHcccCHHHCCCCCCCHHHH
Confidence            112245688999999999999999987544433

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=100.00  E-value=8.6e-37  Score=310.67  Aligned_cols=253  Identities=26%  Similarity=0.388  Sum_probs=203.4

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEecc
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYV  409 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~  409 (653)
                      +.|+..++||+|+||.||+|... +++.||+|.+..... ..+.+.+|+.++++++|+|++++++++. .+..+++|||+
T Consensus         6 ~~~~~~~~ig~G~~g~v~~~~~~-~~~~~a~K~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~   82 (260)
T cd05067           6 ETLKLVKKLGAGQFGEVWMGYYN-GHTKVAIKSLKQGSM-SPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIITEYM   82 (260)
T ss_pred             HHceeeeeeccCccceEEeeecC-CCceEEEEEecCCCC-cHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEEEcC
Confidence            56788899999999999999875 478899999865433 3467889999999999999999999874 45689999999


Q ss_pred             CCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCC
Q 048419          410 PNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGA  489 (653)
Q Consensus       410 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~  489 (653)
                      ++++|.+++....   ...+++.+++.++.|++.||+|||+   .+++|+||||+||+++.++.++|+|||++.......
T Consensus        83 ~~~~L~~~~~~~~---~~~~~~~~~~~i~~~i~~al~~LH~---~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~  156 (260)
T cd05067          83 ENGSLVDFLKTPE---GIKLTINKLIDMAAQIAEGMAFIER---KNYIHRDLRAANILVSETLCCKIADFGLARLIEDNE  156 (260)
T ss_pred             CCCCHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHhc---CCeecccccHHhEEEcCCCCEEEccCcceeecCCCC
Confidence            9999999986543   3458899999999999999999999   899999999999999999999999999998665332


Q ss_pred             CCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhcc
Q 048419          490 NPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTL  568 (653)
Q Consensus       490 ~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l  568 (653)
                      ........++..|+|||.+....++.++||||||+++|||++ |+.||.......   +.+.+.....    .       
T Consensus       157 ~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~---~~~~~~~~~~----~-------  222 (260)
T cd05067         157 YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPE---VIQNLERGYR----M-------  222 (260)
T ss_pred             cccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHH---HHHHHHcCCC----C-------
Confidence            222223345678999999988889999999999999999999 999997544321   1111111000    0       


Q ss_pred             CcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          569 DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       569 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                       .........+.+++.+||+.+|++||++.++++.|+.
T Consensus       223 -~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~  259 (260)
T cd05067         223 -PRPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLED  259 (260)
T ss_pred             -CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence             0111123568999999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=100.00  E-value=7e-37  Score=310.29  Aligned_cols=251  Identities=23%  Similarity=0.322  Sum_probs=205.4

Q ss_pred             CcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC-chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEecc
Q 048419          331 GFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN-SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYV  409 (653)
Q Consensus       331 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~  409 (653)
                      +|+..+.||+|+||.||++....++..+|+|.+... .....+.+.+|+.++++++|+|++++++.+...+.++++|||+
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   80 (255)
T cd08219           1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC   80 (255)
T ss_pred             CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence            467789999999999999999988999999998643 3445677889999999999999999999999999999999999


Q ss_pred             CCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCC
Q 048419          410 PNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGA  489 (653)
Q Consensus       410 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~  489 (653)
                      ++++|.+++....   ...+++...+.++.|++.||.|||+   ++++|+||||+||++++++.++|+|||++.......
T Consensus        81 ~~~~l~~~~~~~~---~~~~~~~~~~~~~~~i~~al~~lH~---~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~  154 (255)
T cd08219          81 DGGDLMQKIKLQR---GKLFPEDTILQWFVQMCLGVQHIHE---KRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPG  154 (255)
T ss_pred             CCCcHHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCcceEEECCCCcEEEcccCcceeecccc
Confidence            9999999886533   3457889999999999999999999   899999999999999999999999999998654322


Q ss_pred             CCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhccC
Q 048419          490 NPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLD  569 (653)
Q Consensus       490 ~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~  569 (653)
                       .......++..|+|||.+.+..++.++||||||+++|+|++|+.||........   ...+.    .+...        
T Consensus       155 -~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~---~~~~~----~~~~~--------  218 (255)
T cd08219         155 -AYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNL---ILKVC----QGSYK--------  218 (255)
T ss_pred             -cccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHH---HHHHh----cCCCC--------
Confidence             122335688899999999988899999999999999999999999976433211   11111    11100        


Q ss_pred             cCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 048419          570 YYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEF  603 (653)
Q Consensus       570 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  603 (653)
                      ..+......+.+++.+||+.||.+||++.+++..
T Consensus       219 ~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~  252 (255)
T cd08219         219 PLPSHYSYELRSLIKQMFKRNPRSRPSATTILSR  252 (255)
T ss_pred             CCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence            0111233567899999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=100.00  E-value=6.5e-37  Score=311.14  Aligned_cols=246  Identities=27%  Similarity=0.379  Sum_probs=196.6

Q ss_pred             eeeeeCcEEEEEEEe--CCCCcEEEEEEeccCc--hhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEeccCCC
Q 048419          337 LVGSGGFGRVYRGLM--PSLGLEVAIKRIGHNS--QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNG  412 (653)
Q Consensus       337 ~LG~G~fg~Vy~~~~--~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~g  412 (653)
                      .||+|+||.||+|.+  ..++..+|+|++....  ....+++.+|+.++++++|+||+++++++. .+..++||||++++
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~   80 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG   80 (257)
T ss_pred             cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence            589999999999965  4557899999986443  334678899999999999999999999885 45678999999999


Q ss_pred             CchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCCCCc
Q 048419          413 SLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQ  492 (653)
Q Consensus       413 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~  492 (653)
                      +|.+++...     ..+++..+.+++.|++.||+|||+   ++++||||||+||+++.++.+||+|||+++.........
T Consensus        81 ~L~~~l~~~-----~~~~~~~~~~i~~qi~~al~~lH~---~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~  152 (257)
T cd05116          81 PLNKFLQKN-----KHVTEKNITELVHQVSMGMKYLEE---TNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYY  152 (257)
T ss_pred             cHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccchhhEEEcCCCeEEECCCccccccCCCCCee
Confidence            999998653     348899999999999999999999   899999999999999999999999999998764432211


Q ss_pred             --ccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhccC
Q 048419          493 --TTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLD  569 (653)
Q Consensus       493 --~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~  569 (653)
                        .....++..|+|||.+....++.++|||||||++|||++ |+.||.......   +.+.+..    +...        
T Consensus       153 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~---~~~~i~~----~~~~--------  217 (257)
T cd05116         153 KAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNE---VTQMIES----GERM--------  217 (257)
T ss_pred             eecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH---HHHHHHC----CCCC--------
Confidence              112234578999999988889999999999999999998 999997543321   1222211    1100        


Q ss_pred             cCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          570 YYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       570 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                      ..+......+.+++.+||+.||.+||++.+|.+.|++
T Consensus       218 ~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~  254 (257)
T cd05116         218 ECPQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRN  254 (257)
T ss_pred             CCCCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhc
Confidence            0111234668899999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=100.00  E-value=9.8e-37  Score=316.30  Aligned_cols=265  Identities=22%  Similarity=0.325  Sum_probs=206.7

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCC----------------cEEEEEEeccCc-hhhHHHHHHHHHHHhhcCCCceeee
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLG----------------LEVAIKRIGHNS-QQGMKEFVAEIMSMGRLRHRNLVQL  392 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~----------------~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l  392 (653)
                      ++|+..+.||+|+||.||++.....+                ..||+|.+.... ....+.+.+|++++++++|+|++++
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~   84 (296)
T cd05051           5 QPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARL   84 (296)
T ss_pred             hhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeEE
Confidence            56888999999999999999876433                568999987543 3456788999999999999999999


Q ss_pred             eeeecccceeEEEEeccCCCCchhhhhccccc------ccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcE
Q 048419          393 HGWCRKQDELLLVYDYVPNGSLDKLLFDKDHK------LRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNI  466 (653)
Q Consensus       393 ~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NI  466 (653)
                      +++|...+..++++||+++++|.+++......      ....+++..++.++.|++.||.|||+   .+++|+||||+||
T Consensus        85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~---~~i~H~dlkp~Ni  161 (296)
T cd05051          85 LGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLES---LNFVHRDLATRNC  161 (296)
T ss_pred             EEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHH---cCccccccchhce
Confidence            99999999999999999999999999765421      12358999999999999999999999   8999999999999


Q ss_pred             EEcCCCcEEEEeecCcccccCCCC-CcccccccCCcccCccccccCCCCCccceeehHHHHHHHHh--CCCCCChhhhhh
Q 048419          467 LLDTYLNAKLGDFGLAKIYEHGAN-PQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC--GRRSIEPQKAAA  543 (653)
Q Consensus       467 ll~~~~~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt--G~~p~~~~~~~~  543 (653)
                      +++.++.++|+|||+++....... .......++..|+|||.+.+..++.++|||||||++|||++  |..|+.......
T Consensus       162 li~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~  241 (296)
T cd05051         162 LVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQQ  241 (296)
T ss_pred             eecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcChHH
Confidence            999999999999999876533221 12233456778999999988889999999999999999998  667776433211


Q ss_pred             HHHHHHHHHhhhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          544 ELLLVDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       544 ~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                         ....+............     ..........+.+++.+||+.||.+||++.||++.|+
T Consensus       242 ---~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~  295 (296)
T cd05051         242 ---VIENAGHFFRDDGRQIY-----LPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ  295 (296)
T ss_pred             ---HHHHHHhcccccccccc-----CCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence               11122111111110000     0011123467999999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=100.00  E-value=6.3e-37  Score=319.11  Aligned_cols=257  Identities=24%  Similarity=0.384  Sum_probs=205.1

Q ss_pred             cCcCcceeeeeeCcEEEEEEEe-----CCCCcEEEEEEeccCc-hhhHHHHHHHHHHHhhc-CCCceeeeeeeeccccee
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLM-----PSLGLEVAIKRIGHNS-QQGMKEFVAEIMSMGRL-RHRNLVQLHGWCRKQDEL  402 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~-----~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~  402 (653)
                      ++|...+.||+|+||.||++..     ...+..||||.++... ....+.+.+|+.+++++ +|+||++++++|...+..
T Consensus        35 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~  114 (302)
T cd05055          35 NNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGPI  114 (302)
T ss_pred             HHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCce
Confidence            5688899999999999999975     2345689999987543 33456789999999999 799999999999999999


Q ss_pred             EEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCc
Q 048419          403 LLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLA  482 (653)
Q Consensus       403 ~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla  482 (653)
                      ++||||+++|+|.+++....   ...+++.++..++.|++.||+|||+   ++++|+||||+|||++.++.+||+|||++
T Consensus       115 ~lv~e~~~~~~L~~~i~~~~---~~~l~~~~~~~i~~~i~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~~l~dfg~~  188 (302)
T cd05055         115 LVITEYCCYGDLLNFLRRKR---ESFLTLEDLLSFSYQVAKGMAFLAS---KNCIHRDLAARNVLLTHGKIVKICDFGLA  188 (302)
T ss_pred             EEEEEcCCCCcHHHHHHhCC---CCCCCHHHHHHHHHHHHHHHHHHHH---CCeehhhhccceEEEcCCCeEEECCCccc
Confidence            99999999999999997543   2348999999999999999999999   89999999999999999999999999999


Q ss_pred             ccccCCCCC-cccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhhcccch
Q 048419          483 KIYEHGANP-QTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELHLEGEI  560 (653)
Q Consensus       483 ~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~  560 (653)
                      +........ ......++..|+|||.+.+..++.++|||||||++|||++ |+.|+........  +...+..    +..
T Consensus       189 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~--~~~~~~~----~~~  262 (302)
T cd05055         189 RDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSK--FYKLIKE----GYR  262 (302)
T ss_pred             ccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHH--HHHHHHc----CCc
Confidence            865432211 1122345678999999988889999999999999999998 9999865432211  1111111    100


Q ss_pred             hHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          561 TQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       561 ~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                              ..........+.+++.+||+.+|++||++.|+++.|+.
T Consensus       263 --------~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~  300 (302)
T cd05055         263 --------MAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGK  300 (302)
T ss_pred             --------CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHh
Confidence                    00011124578999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=100.00  E-value=1.5e-36  Score=324.16  Aligned_cols=264  Identities=22%  Similarity=0.274  Sum_probs=201.8

Q ss_pred             HhhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC--chhhHHHHHHHHHHHhhcCCCceeeeeeeecccc----
Q 048419          327 SVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQD----  400 (653)
Q Consensus       327 ~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~----  400 (653)
                      ...++|...+.||+|+||.||++.+..+|..||||++...  .......+.+|+.+++.++||||+++++++...+    
T Consensus        18 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~   97 (359)
T cd07876          18 TVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEE   97 (359)
T ss_pred             hhhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccc
Confidence            3457899999999999999999999888999999998643  3344567889999999999999999999886543    


Q ss_pred             --eeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEe
Q 048419          401 --ELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGD  478 (653)
Q Consensus       401 --~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D  478 (653)
                        ..++||||+++ +|...+..       .+++..+..++.||+.||.|||+   ++|+||||||+|||++.++.+||+|
T Consensus        98 ~~~~~lv~e~~~~-~l~~~~~~-------~~~~~~~~~~~~qi~~~L~~LH~---~~ivHrDlkp~NIl~~~~~~~kl~D  166 (359)
T cd07876          98 FQDVYLVMELMDA-NLCQVIHM-------ELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILD  166 (359)
T ss_pred             cceeEEEEeCCCc-CHHHHHhc-------cCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEEEec
Confidence              47999999965 56665532       37788889999999999999999   8999999999999999999999999


Q ss_pred             ecCcccccCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhc--
Q 048419          479 FGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHL--  556 (653)
Q Consensus       479 fGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~--  556 (653)
                      ||+++.....  .......||..|+|||.+.+..++.++|||||||++|||++|+.||...+.....  .........  
T Consensus       167 fg~a~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~--~~~~~~~~~~~  242 (359)
T cd07876         167 FGLARTACTN--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQW--NKVIEQLGTPS  242 (359)
T ss_pred             CCCccccccC--ccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHH--HHHHHhcCCCc
Confidence            9999754322  2223457899999999999989999999999999999999999999765432211  000000000  


Q ss_pred             -----------------c-----cchhHhhhhcc----CcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          557 -----------------E-----GEITQAIDQTL----DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       557 -----------------~-----~~~~~~~d~~l----~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                                       .     ....+......    ..........+.+++.+||+.||++|||+.|++++-.
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~  317 (359)
T cd07876         243 AEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPY  317 (359)
T ss_pred             HHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCch
Confidence                             0     00000000000    0001112356889999999999999999999999764

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=100.00  E-value=8.1e-37  Score=315.98  Aligned_cols=262  Identities=24%  Similarity=0.369  Sum_probs=205.3

Q ss_pred             hhcCcCcceeeeeeCcEEEEEEEeCC-----CCcEEEEEEeccCc-hhhHHHHHHHHHHHhhcCCCceeeeeeeecccce
Q 048419          328 VTKGFGEQNLVGSGGFGRVYRGLMPS-----LGLEVAIKRIGHNS-QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDE  401 (653)
Q Consensus       328 at~~f~~~~~LG~G~fg~Vy~~~~~~-----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~  401 (653)
                      .+++|+..+.||+|+||.||+|...+     .+..||+|.+.... ......+.+|+..+++++|+||+++++++.+.+.
T Consensus         4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~   83 (288)
T cd05061           4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQP   83 (288)
T ss_pred             cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence            45678889999999999999997642     35589999986443 2334568899999999999999999999999999


Q ss_pred             eEEEEeccCCCCchhhhhccccc-----ccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEE
Q 048419          402 LLLVYDYVPNGSLDKLLFDKDHK-----LRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKL  476 (653)
Q Consensus       402 ~~lV~E~~~~gsL~~~l~~~~~~-----~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl  476 (653)
                      .++||||+++|+|.+++......     ....+++..+++++.|++.||.|||+   ++++||||||+||++++++.+||
T Consensus        84 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~H~dikp~nili~~~~~~~L  160 (288)
T cd05061          84 TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA---KKFVHRDLAARNCMVAHDFTVKI  160 (288)
T ss_pred             cEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCcCCCCChheEEEcCCCcEEE
Confidence            99999999999999999753211     12345677889999999999999999   99999999999999999999999


Q ss_pred             EeecCcccccCCCCC-cccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhh
Q 048419          477 GDFGLAKIYEHGANP-QTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKEL  554 (653)
Q Consensus       477 ~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~  554 (653)
                      +|||+++........ ......++..|+|||.+.+..++.++|||||||++|||++ |..|+......+   ..+.+.  
T Consensus       161 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~---~~~~~~--  235 (288)
T cd05061         161 GDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQ---VLKFVM--  235 (288)
T ss_pred             CcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHH---HHHHHH--
Confidence            999999865332211 1122245678999999998889999999999999999999 788886543221   111111  


Q ss_pred             hcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcCC
Q 048419          555 HLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLGD  607 (653)
Q Consensus       555 ~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  607 (653)
                        .+        ............+.+++.+||+.+|.+||++.++++.|...
T Consensus       236 --~~--------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~  278 (288)
T cd05061         236 --DG--------GYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD  278 (288)
T ss_pred             --cC--------CCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhh
Confidence              01        00011112346799999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.1e-36  Score=321.48  Aligned_cols=258  Identities=24%  Similarity=0.270  Sum_probs=199.9

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC---chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN---SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVY  406 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  406 (653)
                      ++|+..+.||+|+||.||+++...+++.||+|++...   .....+.+.+|+.++..++|+||+++++++.+.+.+++||
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (331)
T cd05597           1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM   80 (331)
T ss_pred             CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence            4688899999999999999999988999999998642   2234556889999999999999999999999999999999


Q ss_pred             eccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccccc
Q 048419          407 DYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE  486 (653)
Q Consensus       407 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~  486 (653)
                      ||+++|+|.+++....    ..+++.++..++.||+.||+|||+   ++|+||||||+|||++.++.+||+|||++....
T Consensus        81 e~~~g~~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~  153 (331)
T cd05597          81 DYYVGGDLLTLLSKFE----DRLPEDMARFYLAEMVLAIDSVHQ---LGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLL  153 (331)
T ss_pred             ecCCCCcHHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHh---CCeEECCCCHHHEEECCCCCEEEEECCceeecC
Confidence            9999999999996532    348889999999999999999999   999999999999999999999999999987654


Q ss_pred             CCCCCcccccccCCcccCcccccc-----CCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchh
Q 048419          487 HGANPQTTHIVGTLGYLAPELTRT-----GKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEIT  561 (653)
Q Consensus       487 ~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~  561 (653)
                      ...........||+.|+|||++..     ..++.++|||||||++|||++|+.||.........   ..+.   ......
T Consensus       154 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~---~~i~---~~~~~~  227 (331)
T cd05597         154 ADGTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETY---GKIM---NHKEHF  227 (331)
T ss_pred             CCCCccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHH---HHHH---cCCCcc
Confidence            433222233468999999999863     45788999999999999999999999754332110   0010   000000


Q ss_pred             HhhhhccCcCCHHHHHHHHHHHHHcCCC--CCCCCCCHHHHHHHHc
Q 048419          562 QAIDQTLDYYDLAEAELVLNLGLFCSAP--NPVYRPDMRRVVEFLL  605 (653)
Q Consensus       562 ~~~d~~l~~~~~~~~~~l~~l~~~Cl~~--dP~~RPs~~evl~~L~  605 (653)
                      .     +..........+.+++.+|+..  ++..||++.+++++-.
T Consensus       228 ~-----~~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~hp~  268 (331)
T cd05597         228 Q-----FPPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDHPF  268 (331)
T ss_pred             c-----CCCccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCCC
Confidence            0     0000011234566777776644  4445889999998754

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=100.00  E-value=1.3e-36  Score=308.33  Aligned_cols=251  Identities=24%  Similarity=0.376  Sum_probs=204.6

Q ss_pred             CcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC--chhhHHHHHHHHHHHhhcCCCceeeeeeeecc-cceeEEEEe
Q 048419          331 GFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRK-QDELLLVYD  407 (653)
Q Consensus       331 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~-~~~~~lV~E  407 (653)
                      +|+..+.||+|++|.||++....+++.||+|++...  .....+.+.+|++++++++|+|++++++.+.. ...++++||
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e   80 (257)
T cd08223           1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG   80 (257)
T ss_pred             CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence            477889999999999999999888999999998643  33455678899999999999999999988764 446799999


Q ss_pred             ccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccC
Q 048419          408 YVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEH  487 (653)
Q Consensus       408 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~  487 (653)
                      |+++++|.+++....   ...+++.+++.++.|++.||.|||+   .+++|+||||+||+++.++.++|+|||++.....
T Consensus        81 ~~~~~~l~~~l~~~~---~~~l~~~~~~~~~~~l~~~l~~lH~---~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~  154 (257)
T cd08223          81 FCEGGDLYHKLKEQK---GKLLPENQVVEWFVQIAMALQYLHE---KHILHRDLKTQNVFLTRTNIIKVGDLGIARVLEN  154 (257)
T ss_pred             ccCCCcHHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCchhEEEecCCcEEEecccceEEecc
Confidence            999999999997643   3458999999999999999999999   8999999999999999999999999999987643


Q ss_pred             CCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhc
Q 048419          488 GANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQT  567 (653)
Q Consensus       488 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~  567 (653)
                      ... ......+++.|+|||.+.+..++.++||||||++++||++|+.||...+....      .... ..+.+       
T Consensus       155 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~------~~~~-~~~~~-------  219 (257)
T cd08223         155 QCD-MASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSL------VYRI-IEGKL-------  219 (257)
T ss_pred             cCC-ccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHH------HHHH-HhcCC-------
Confidence            222 22334678899999999988899999999999999999999999875432211      1110 01111       


Q ss_pred             cCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 048419          568 LDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEF  603 (653)
Q Consensus       568 l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  603 (653)
                       ..........+.+++.+|++.+|.+||++.+++++
T Consensus       220 -~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~  254 (257)
T cd08223         220 -PPMPKDYSPELGELIATMLSKRPEKRPSVKSILRQ  254 (257)
T ss_pred             -CCCccccCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence             11122344678899999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=100.00  E-value=9.2e-38  Score=324.22  Aligned_cols=262  Identities=26%  Similarity=0.395  Sum_probs=210.6

Q ss_pred             CcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc-hhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEecc
Q 048419          331 GFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS-QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYV  409 (653)
Q Consensus       331 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~  409 (653)
                      ...+.++||+|-||.|.++.... +..||||.++... ....++|..|+++|.+|+||||++++|.|...+.+++|+|||
T Consensus       539 ~L~~~ekiGeGqFGEVhLCeveg-~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYm  617 (807)
T KOG1094|consen  539 RLRFKEKIGEGQFGEVHLCEVEG-PLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYM  617 (807)
T ss_pred             heehhhhhcCcccceeEEEEecC-ceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHH
Confidence            35567889999999999999864 7999999998764 445689999999999999999999999999999999999999


Q ss_pred             CCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCC
Q 048419          410 PNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGA  489 (653)
Q Consensus       410 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~  489 (653)
                      ++|+|..+|..+..   ..+.-..-.+|+.|||.|++||.+   .++|||||.++|+|++.++++||+|||+++.+-.+.
T Consensus       618 EnGDLnqFl~ahea---pt~~t~~~vsi~tqiasgmaYLes---~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~  691 (807)
T KOG1094|consen  618 ENGDLNQFLSAHEL---PTAETAPGVSICTQIASGMAYLES---LNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGD  691 (807)
T ss_pred             hcCcHHHHHHhccC---cccccchhHHHHHHHHHHHHHHHh---hchhhccccccceeecCcccEEecCcccccccccCC
Confidence            99999999988742   224555667899999999999999   899999999999999999999999999999654433


Q ss_pred             C-CcccccccCCcccCccccccCCCCCccceeehHHHHHHHH--hCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhh
Q 048419          490 N-PQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVA--CGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQ  566 (653)
Q Consensus       490 ~-~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ell--tG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  566 (653)
                      . ......+-.++|||||.+..++++.++|||+||+++||++  |...||.....+...   +..-....... ...   
T Consensus       692 yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vv---en~~~~~~~~~-~~~---  764 (807)
T KOG1094|consen  692 YYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVV---ENAGEFFRDQG-RQV---  764 (807)
T ss_pred             ceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHH---HhhhhhcCCCC-cce---
Confidence            3 2333445678999999999999999999999999999974  577898866543321   11111111110 000   


Q ss_pred             ccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcCC
Q 048419          567 TLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLGD  607 (653)
Q Consensus       567 ~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  607 (653)
                       ....+.-+...+.++++.||..+-++||+++++..+|..+
T Consensus       765 -~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~  804 (807)
T KOG1094|consen  765 -VLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED  804 (807)
T ss_pred             -eccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence             0122344567788999999999999999999999988654

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=100.00  E-value=1.2e-36  Score=309.84  Aligned_cols=253  Identities=27%  Similarity=0.405  Sum_probs=201.8

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEecc
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYV  409 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~  409 (653)
                      ++|.....||+|++|.||+|.+... ..+|+|.+.... ...+.+.+|+.++++++|+|++++++++. .+..+++|||+
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~~-~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~   82 (260)
T cd05069           6 ESLRLDVKLGQGCFGEVWMGTWNGT-TKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFM   82 (260)
T ss_pred             HHeeeeeeecCcCCCeEEEEEEcCC-ceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcC
Confidence            4577788999999999999988654 569999885433 23467889999999999999999999875 45688999999


Q ss_pred             CCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCC
Q 048419          410 PNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGA  489 (653)
Q Consensus       410 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~  489 (653)
                      ++++|.+++....   ...+++..+..++.|++.||.|||+   .+++|+||||+||++++++.+||+|||+++......
T Consensus        83 ~~~~L~~~~~~~~---~~~~~~~~~~~~~~~l~~al~~lH~---~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~  156 (260)
T cd05069          83 GKGSLLDFLKEGD---GKYLKLPQLVDMAAQIADGMAYIER---MNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNE  156 (260)
T ss_pred             CCCCHHHHHhhCC---CCCCCHHHHHHHHHHHHHHHHHHHh---CCEeecccCcceEEEcCCCeEEECCCccceEccCCc
Confidence            9999999997643   3457899999999999999999999   899999999999999999999999999998664332


Q ss_pred             CCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhcc
Q 048419          490 NPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTL  568 (653)
Q Consensus       490 ~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l  568 (653)
                      ........++..|+|||...+..++.++||||||+++|||++ |+.||.......   ...+......   .        
T Consensus       157 ~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~---~~~~~~~~~~---~--------  222 (260)
T cd05069         157 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNRE---VLEQVERGYR---M--------  222 (260)
T ss_pred             ccccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHH---HHHHHHcCCC---C--------
Confidence            222222345678999999988889999999999999999999 888987543321   1111111100   0        


Q ss_pred             CcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          569 DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       569 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                       .........+.+++.+||+.+|.+||++++|++.|+.
T Consensus       223 -~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  259 (260)
T cd05069         223 -PCPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED  259 (260)
T ss_pred             -CCCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence             0111234678999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=100.00  E-value=1.4e-36  Score=308.08  Aligned_cols=252  Identities=22%  Similarity=0.343  Sum_probs=208.4

Q ss_pred             CcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC--chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEec
Q 048419          331 GFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDY  408 (653)
Q Consensus       331 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~  408 (653)
                      +|+..+.||+|+||.||.+....++..+++|.+...  .....+.+.+|++++++++|+||+++++++.+.+.++++|||
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~   80 (256)
T cd08221           1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY   80 (256)
T ss_pred             CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence            477889999999999999999888999999998654  345567889999999999999999999999999999999999


Q ss_pred             cCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCC
Q 048419          409 VPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHG  488 (653)
Q Consensus       409 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~  488 (653)
                      +++++|.+++....   ...+++.++..++.|++++|.|||+   .+++|+||+|+||+++.++.+||+|||++......
T Consensus        81 ~~~~~L~~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~  154 (256)
T cd08221          81 ANGGTLYDKIVRQK---GQLFEEEMVLWYLFQIVSAVSYIHK---AGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSE  154 (256)
T ss_pred             cCCCcHHHHHHhcc---ccCCCHHHHHHHHHHHHHHHHHHHh---CCccccCCChHhEEEeCCCCEEECcCcceEEcccc
Confidence            99999999997653   2458899999999999999999999   89999999999999999999999999999876443


Q ss_pred             CCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhcc
Q 048419          489 ANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTL  568 (653)
Q Consensus       489 ~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l  568 (653)
                      .. ......++..|+|||.+.+..++.++||||||++++||++|+.||........      .... ..+..        
T Consensus       155 ~~-~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~------~~~~-~~~~~--------  218 (256)
T cd08221         155 YS-MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNL------VVKI-VQGNY--------  218 (256)
T ss_pred             cc-cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHH------HHHH-HcCCC--------
Confidence            32 22334688999999999888889999999999999999999999975433211      1110 01111        


Q ss_pred             CcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          569 DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       569 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                      ..........+.+++.+||+.+|.+||++.++++++
T Consensus       219 ~~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~  254 (256)
T cd08221         219 TPVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQP  254 (256)
T ss_pred             CCCccccCHHHHHHHHHHcccCcccCCCHHHHhhCc
Confidence            111122346688999999999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=100.00  E-value=1.4e-36  Score=308.96  Aligned_cols=247  Identities=26%  Similarity=0.386  Sum_probs=196.2

Q ss_pred             eeeeeCcEEEEEEEeC--CCCcEEEEEEeccCc-hhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEeccCCCC
Q 048419          337 LVGSGGFGRVYRGLMP--SLGLEVAIKRIGHNS-QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGS  413 (653)
Q Consensus       337 ~LG~G~fg~Vy~~~~~--~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gs  413 (653)
                      .||+|+||.||+|.+.  +.+..||+|++.... ....+.+.+|+.++++++|+||++++++|.. +..++||||+++++
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~-~~~~lv~e~~~~~~   80 (257)
T cd05115           2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEA-EALMLVMEMASGGP   80 (257)
T ss_pred             ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC-CCeEEEEEeCCCCC
Confidence            3899999999999764  445679999986553 3345678999999999999999999998854 56899999999999


Q ss_pred             chhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCCCCc-
Q 048419          414 LDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQ-  492 (653)
Q Consensus       414 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~-  492 (653)
                      |.+++....    ..+++.++++++.|++.||.|||+   ++++|+||||+||+++.++.+||+|||++.......... 
T Consensus        81 L~~~l~~~~----~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~  153 (257)
T cd05115          81 LNKFLSGKK----DEITVSNVVELMHQVSMGMKYLEG---KNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYK  153 (257)
T ss_pred             HHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHHh---cCeeecccchheEEEcCCCcEEeccCCccccccCCcccee
Confidence            999986532    358999999999999999999999   899999999999999999999999999998654332211 


Q ss_pred             -ccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhccCc
Q 048419          493 -TTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDY  570 (653)
Q Consensus       493 -~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~  570 (653)
                       .....++..|+|||.+....++.++|||||||++|||++ |..||.......   ....+.    .+..        ..
T Consensus       154 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~---~~~~~~----~~~~--------~~  218 (257)
T cd05115         154 ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPE---VMSFIE----QGKR--------LD  218 (257)
T ss_pred             ccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHH---HHHHHH----CCCC--------CC
Confidence             111233568999999988889999999999999999996 999997654322   111111    1110        01


Q ss_pred             CCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          571 YDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       571 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                      .+..+...+.+++.+||+.+|++||++.+|.+.|+.
T Consensus       219 ~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~  254 (257)
T cd05115         219 CPAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRT  254 (257)
T ss_pred             CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhh
Confidence            112335678899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.4e-36  Score=308.51  Aligned_cols=248  Identities=27%  Similarity=0.429  Sum_probs=199.0

Q ss_pred             eeeeeeCcEEEEEEEeCCCC---cEEEEEEeccCch-hhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEeccCC
Q 048419          336 NLVGSGGFGRVYRGLMPSLG---LEVAIKRIGHNSQ-QGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPN  411 (653)
Q Consensus       336 ~~LG~G~fg~Vy~~~~~~~~---~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~  411 (653)
                      +.||+|+||.||+|+....+   ..+|+|.+..... ...+.+.+|+.+++++.|+|++++++++. .+..++||||+++
T Consensus         1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~   79 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPL   79 (257)
T ss_pred             CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCC
Confidence            46999999999999875544   7899999875543 34567899999999999999999999876 4468999999999


Q ss_pred             CCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCCCC
Q 048419          412 GSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANP  491 (653)
Q Consensus       412 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~  491 (653)
                      ++|.+++....     .+++..++.++.|++.||.|||+   ++++|+||||+|||++.++.+||+|||+++........
T Consensus        80 ~~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lh~---~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~  151 (257)
T cd05060          80 GPLLKYLKKRR-----EIPVSDLKELAHQVAMGMAYLES---KHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDY  151 (257)
T ss_pred             CcHHHHHHhCC-----CCCHHHHHHHHHHHHHHHHHHhh---cCeeccCcccceEEEcCCCcEEeccccccceeecCCcc
Confidence            99999997643     48899999999999999999999   89999999999999999999999999999866443322


Q ss_pred             cc--cccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhcc
Q 048419          492 QT--THIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTL  568 (653)
Q Consensus       492 ~~--~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l  568 (653)
                      ..  ....++..|+|||.+.+..++.++||||||+++|||++ |+.||.......   +..++.....   .        
T Consensus       152 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~---~~~~~~~~~~---~--------  217 (257)
T cd05060         152 YRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAE---VIAMLESGER---L--------  217 (257)
T ss_pred             cccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHH---HHHHHHcCCc---C--------
Confidence            11  11223567999999998899999999999999999998 999987654321   2222221110   0        


Q ss_pred             CcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcCC
Q 048419          569 DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLGD  607 (653)
Q Consensus       569 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  607 (653)
                       ..+...+..+.+++.+||+.+|.+||++.++++.|+..
T Consensus       218 -~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~  255 (257)
T cd05060         218 -PRPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRD  255 (257)
T ss_pred             -CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhc
Confidence             01112345788999999999999999999999999764

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.4e-36  Score=308.26  Aligned_cols=249  Identities=31%  Similarity=0.425  Sum_probs=205.4

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEecc
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYV  409 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~  409 (653)
                      ++|+..+.||+|+||.||+|...  |+.||+|.+..... ..+.+.+|+.++++++|+|++++++++...+..++||||+
T Consensus         6 ~~~~~~~~ig~g~~g~v~~~~~~--~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~   82 (256)
T cd05039           6 KELKLGATIGKGEFGDVMLGDYR--GQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYM   82 (256)
T ss_pred             hhccceeeeecCCCceEEEEEec--CcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEec
Confidence            46778899999999999999875  78899999976544 5678999999999999999999999999988999999999


Q ss_pred             CCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCC
Q 048419          410 PNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGA  489 (653)
Q Consensus       410 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~  489 (653)
                      ++++|.+++....   ...+++.++..++.|++.||.|||+   ++++|+||||+||+++.++.+||+|||+++......
T Consensus        83 ~~~~L~~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lh~---~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~  156 (256)
T cd05039          83 AKGSLVDYLRSRG---RAVITLAQQLGFALDVCEGMEYLEE---KNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQ  156 (256)
T ss_pred             CCCcHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHh---CCccchhcccceEEEeCCCCEEEccccccccccccc
Confidence            9999999997654   2358999999999999999999999   999999999999999999999999999998663221


Q ss_pred             CCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhcc
Q 048419          490 NPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTL  568 (653)
Q Consensus       490 ~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l  568 (653)
                          .....+..|+|||.+.+..++.++||||||++++||++ |+.||.......   +...+.....            
T Consensus       157 ----~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~---~~~~~~~~~~------------  217 (256)
T cd05039         157 ----DSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD---VVPHVEKGYR------------  217 (256)
T ss_pred             ----ccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHH---HHHHHhcCCC------------
Confidence                12334668999999988889999999999999999997 999987543321   1111111100            


Q ss_pred             CcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          569 DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       569 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                      ...+...+..+.+++.+||+.+|.+||++.+++++|+.
T Consensus       218 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~  255 (256)
T cd05039         218 MEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLAL  255 (256)
T ss_pred             CCCccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhc
Confidence            00111234678899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>PTZ00036 glycogen synthase kinase; Provisional

Probab=100.00  E-value=4.2e-37  Score=336.39  Aligned_cols=264  Identities=23%  Similarity=0.330  Sum_probs=196.6

Q ss_pred             hcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeeccc--------c
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQ--------D  400 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~--------~  400 (653)
                      .++|...+.||+|+||.||+|....+++.||||++....    ....+|+.++++++|+||+++++++...        .
T Consensus        65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~  140 (440)
T PTZ00036         65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNI  140 (440)
T ss_pred             CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCce
Confidence            457899999999999999999998889999999985432    2234799999999999999998876332        2


Q ss_pred             eeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCC-cEEEEee
Q 048419          401 ELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYL-NAKLGDF  479 (653)
Q Consensus       401 ~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~-~~kl~Df  479 (653)
                      .+++||||+++ +|.+++..... ....+++..++.++.||+.||+|||+   ++|+||||||+|||++.++ .+||+||
T Consensus       141 ~l~lvmE~~~~-~l~~~~~~~~~-~~~~l~~~~~~~~~~qi~~gL~yLH~---~~IiHrDLKp~NILl~~~~~~vkL~DF  215 (440)
T PTZ00036        141 FLNVVMEFIPQ-TVHKYMKHYAR-NNHALPLFLVKLYSYQLCRALAYIHS---KFICHRDLKPQNLLIDPNTHTLKLCDF  215 (440)
T ss_pred             EEEEEEecCCc-cHHHHHHHHhh-cCCCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCcCHHHEEEcCCCCceeeecc
Confidence            46799999975 77777654221 13458899999999999999999999   9999999999999998665 6999999


Q ss_pred             cCcccccCCCCCcccccccCCcccCccccccC-CCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhh--c
Q 048419          480 GLAKIYEHGANPQTTHIVGTLGYLAPELTRTG-KATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELH--L  556 (653)
Q Consensus       480 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~--~  556 (653)
                      |+++......  ......||+.|+|||++.+. .++.++|||||||++|||++|+.||......+...  ..+....  .
T Consensus       216 Gla~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~--~i~~~~~~p~  291 (440)
T PTZ00036        216 GSAKNLLAGQ--RSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLV--RIIQVLGTPT  291 (440)
T ss_pred             ccchhccCCC--CcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHH--HHHHHhCCCC
Confidence            9998664322  22235689999999987654 68999999999999999999999998654432211  1111100  0


Q ss_pred             ccchh-------Hhhhhcc------CcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          557 EGEIT-------QAIDQTL------DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       557 ~~~~~-------~~~d~~l------~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                      ...+.       +.--+..      ..++......+.+|+.+||+.||.+|||+.|++++-.
T Consensus       292 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~  353 (440)
T PTZ00036        292 EDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPF  353 (440)
T ss_pred             HHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChh
Confidence            00000       0000000      0011122467889999999999999999999997654

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=100.00  E-value=6.4e-37  Score=330.06  Aligned_cols=260  Identities=24%  Similarity=0.358  Sum_probs=203.9

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCC-----CCcEEEEEEeccCc-hhhHHHHHHHHHHHhhcC-CCceeeeeeeeccccee
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPS-----LGLEVAIKRIGHNS-QQGMKEFVAEIMSMGRLR-HRNLVQLHGWCRKQDEL  402 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~-----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~  402 (653)
                      ++|...+.||+|+||.||+|.+.+     .+..||||++.... ....+.+.+|+.++.++. ||||++++++|...+..
T Consensus        37 ~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~~  116 (401)
T cd05107          37 DNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGPI  116 (401)
T ss_pred             HHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCCc
Confidence            456678899999999999998642     35689999997543 333457889999999997 99999999999999999


Q ss_pred             EEEEeccCCCCchhhhhccccc----------------------------------------------------------
Q 048419          403 LLVYDYVPNGSLDKLLFDKDHK----------------------------------------------------------  424 (653)
Q Consensus       403 ~lV~E~~~~gsL~~~l~~~~~~----------------------------------------------------------  424 (653)
                      ++|+||+++|+|.++++.....                                                          
T Consensus       117 ~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (401)
T cd05107         117 YIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDMK  196 (401)
T ss_pred             EEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhcch
Confidence            9999999999999999754210                                                          


Q ss_pred             -----------------------------------ccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEc
Q 048419          425 -----------------------------------LRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLD  469 (653)
Q Consensus       425 -----------------------------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~  469 (653)
                                                         ....+++..++.++.||+.||.|||+   ++++||||||+|||++
T Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrdlkp~NiLl~  273 (401)
T cd05107         197 GTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLAS---KNCVHRDLAARNVLIC  273 (401)
T ss_pred             hhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhc---CCcCcccCCcceEEEe
Confidence                                               11346788889999999999999999   8999999999999999


Q ss_pred             CCCcEEEEeecCcccccCCCC-CcccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHH
Q 048419          470 TYLNAKLGDFGLAKIYEHGAN-PQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLL  547 (653)
Q Consensus       470 ~~~~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l  547 (653)
                      +++.+||+|||+++....... .......++..|+|||.+.+..++.++|||||||++|||++ |+.||......+.  +
T Consensus       274 ~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~--~  351 (401)
T cd05107         274 EGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQ--F  351 (401)
T ss_pred             CCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHH--H
Confidence            999999999999986533221 11223356788999999988889999999999999999998 8888865332111  1


Q ss_pred             HHHHHhhhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          548 VDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       548 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                      ...+..    +.       .+ ..+......+.+|+.+||+.+|.+||++++|++.|+.
T Consensus       352 ~~~~~~----~~-------~~-~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~  398 (401)
T cd05107         352 YNAIKR----GY-------RM-AKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGD  398 (401)
T ss_pred             HHHHHc----CC-------CC-CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence            111111    10       00 0111234678999999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=100.00  E-value=7.6e-37  Score=316.05  Aligned_cols=260  Identities=23%  Similarity=0.385  Sum_probs=205.7

Q ss_pred             hcCcCcceeeeeeCcEEEEEEEeCC-----CCcEEEEEEeccCc-hhhHHHHHHHHHHHhhcCCCceeeeeeeeccccee
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGLMPS-----LGLEVAIKRIGHNS-QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDEL  402 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~~~~-----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~  402 (653)
                      .++|+..+.||+|+||.||++....     ++..||+|.+.... ....+.+.+|+..+++++|+||++++++|...+..
T Consensus         4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~   83 (288)
T cd05050           4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPM   83 (288)
T ss_pred             hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCcc
Confidence            4578889999999999999998743     56889999986543 34456789999999999999999999999999999


Q ss_pred             EEEEeccCCCCchhhhhccccc-----------------ccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCc
Q 048419          403 LLVYDYVPNGSLDKLLFDKDHK-----------------LRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSN  465 (653)
Q Consensus       403 ~lV~E~~~~gsL~~~l~~~~~~-----------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~N  465 (653)
                      ++|+||+++|+|.+++......                 ....+++.+++.++.|++.||+|||+   ++++||||||+|
T Consensus        84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~---~~i~H~dl~p~n  160 (288)
T cd05050          84 CLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSE---RKFVHRDLATRN  160 (288)
T ss_pred             EEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHh---CCeecccccHhh
Confidence            9999999999999999753210                 11347889999999999999999999   899999999999


Q ss_pred             EEEcCCCcEEEEeecCcccccCCCC-CcccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhh
Q 048419          466 ILLDTYLNAKLGDFGLAKIYEHGAN-PQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAA  543 (653)
Q Consensus       466 Ill~~~~~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~  543 (653)
                      |+++.++.+||+|||++........ ........+..|+|||.+.+..++.++|||||||++|||++ |..||......+
T Consensus       161 il~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~~  240 (288)
T cd05050         161 CLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHEE  240 (288)
T ss_pred             eEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence            9999999999999999875433221 11122234667999999988899999999999999999998 888886443221


Q ss_pred             HHHHHHHHHhhhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          544 ELLLVDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       544 ~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                         ....+    ..+...        ..+......+.+++.+||+.+|.+||++.|+++.|+.
T Consensus       241 ---~~~~~----~~~~~~--------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~  288 (288)
T cd05050         241 ---VIYYV----RDGNVL--------SCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR  288 (288)
T ss_pred             ---HHHHH----hcCCCC--------CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence               11111    111111        0111234678999999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=100.00  E-value=1.4e-36  Score=313.80  Aligned_cols=263  Identities=27%  Similarity=0.325  Sum_probs=196.6

Q ss_pred             CcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc--hhhHHHHHHHHHHHhhc---CCCceeeeeeeecc-----cc
Q 048419          331 GFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS--QQGMKEFVAEIMSMGRL---RHRNLVQLHGWCRK-----QD  400 (653)
Q Consensus       331 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l---~H~niv~l~g~~~~-----~~  400 (653)
                      +|+..+.||+|+||.||+|.+..+++.||+|.+....  ......+.+|+.+++++   +||||+++++++..     ..
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~   80 (288)
T cd07863           1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET   80 (288)
T ss_pred             CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence            4778899999999999999999999999999986532  12223455677666655   79999999998754     24


Q ss_pred             eeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeec
Q 048419          401 ELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFG  480 (653)
Q Consensus       401 ~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG  480 (653)
                      ..++||||+++ +|.+++....   ...+++.++..++.|++.||.|||+   ++++||||||+||+++.++.+||+|||
T Consensus        81 ~~~lv~e~~~~-~l~~~~~~~~---~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dikp~Nili~~~~~~kl~dfg  153 (288)
T cd07863          81 KVTLVFEHVDQ-DLRTYLDKVP---PPGLPAETIKDLMRQFLRGLDFLHA---NCIVHRDLKPENILVTSGGQVKLADFG  153 (288)
T ss_pred             eEEEEEccccc-CHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEECccC
Confidence            57999999974 8888886543   2348999999999999999999999   899999999999999999999999999


Q ss_pred             CcccccCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHH-HHHHHHhhhcccc
Q 048419          481 LAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELL-LVDWVKELHLEGE  559 (653)
Q Consensus       481 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~-l~~~~~~~~~~~~  559 (653)
                      +++......  ......++..|+|||++.+..++.++||||+||++|||++|+.||.......... +...... .....
T Consensus       154 ~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~-~~~~~  230 (288)
T cd07863         154 LARIYSCQM--ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGL-PPEDD  230 (288)
T ss_pred             ccccccCcc--cCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCC-CChhh
Confidence            998654321  2233467899999999988889999999999999999999999997554322111 1111000 00000


Q ss_pred             hhH-------hhhhcc----CcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 048419          560 ITQ-------AIDQTL----DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEF  603 (653)
Q Consensus       560 ~~~-------~~d~~l----~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  603 (653)
                      ...       ...+..    ........+.+.+++.+||+.||.+|||+.|++++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~h  285 (288)
T cd07863         231 WPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQH  285 (288)
T ss_pred             CcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence            000       000000    00111234567899999999999999999999865

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=100.00  E-value=1.4e-36  Score=308.23  Aligned_cols=252  Identities=28%  Similarity=0.444  Sum_probs=205.5

Q ss_pred             eeeeeeCcEEEEEEEeCCC---CcEEEEEEeccCchh-hHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEeccCC
Q 048419          336 NLVGSGGFGRVYRGLMPSL---GLEVAIKRIGHNSQQ-GMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPN  411 (653)
Q Consensus       336 ~~LG~G~fg~Vy~~~~~~~---~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~  411 (653)
                      +.||+|+||.||+|.....   +..|++|.+...... ..+.+.+|++.+++++|+|++++++++......++||||+++
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   80 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG   80 (262)
T ss_pred             CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence            4699999999999999866   889999999765433 367899999999999999999999999999999999999999


Q ss_pred             CCchhhhhccccc----ccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccC
Q 048419          412 GSLDKLLFDKDHK----LRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEH  487 (653)
Q Consensus       412 gsL~~~l~~~~~~----~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~  487 (653)
                      ++|.+++......    ....+++.+++.++.|+++||.|||+   ++++|+||||+||++++++.+||+|||.+.....
T Consensus        81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~---~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~  157 (262)
T cd00192          81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLAS---KKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYD  157 (262)
T ss_pred             CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHc---CCcccCccCcceEEECCCCcEEEccccccccccc
Confidence            9999999775211    02458999999999999999999999   9999999999999999999999999999987654


Q ss_pred             CCC-CcccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhhcccchhHhhh
Q 048419          488 GAN-PQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELHLEGEITQAID  565 (653)
Q Consensus       488 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d  565 (653)
                      ... .......++..|+|||.+....++.++||||+|+++|||++ |+.||.......   +.+.+..    +.      
T Consensus       158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~---~~~~~~~----~~------  224 (262)
T cd00192         158 DDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEE---VLEYLRK----GY------  224 (262)
T ss_pred             ccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHH---HHHHHHc----CC------
Confidence            321 12233457889999999988889999999999999999999 689987653321   1111111    10      


Q ss_pred             hccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          566 QTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       566 ~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                        ...........+.+++.+||+.+|.+||++.|++++|+
T Consensus       225 --~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~  262 (262)
T cd00192         225 --RLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE  262 (262)
T ss_pred             --CCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence              00111223567889999999999999999999999874

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=100.00  E-value=1e-36  Score=313.65  Aligned_cols=255  Identities=25%  Similarity=0.356  Sum_probs=203.0

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCc----EEEEEEeccC-chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGL----EVAIKRIGHN-SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLL  404 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~----~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  404 (653)
                      ++|+..+.||+|+||.||+|.+..++.    .||+|.+... .....+.+.+|+.+++.++|+||++++++|... ..++
T Consensus         7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~l   85 (279)
T cd05109           7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLTS-TVQL   85 (279)
T ss_pred             hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCC-CcEE
Confidence            467788999999999999999766555    4899998654 344467888999999999999999999999754 5789


Q ss_pred             EEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccc
Q 048419          405 VYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKI  484 (653)
Q Consensus       405 V~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~  484 (653)
                      ++||+++|+|.+++....    ..+++.+++.++.|++.||.|||+   ++++||||||+|||++.++.+||+|||+++.
T Consensus        86 ~~~~~~~g~l~~~l~~~~----~~~~~~~~~~~~~qi~~~L~~lH~---~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~  158 (279)
T cd05109          86 VTQLMPYGCLLDYVRENK----DRIGSQDLLNWCVQIAKGMSYLEE---VRLVHRDLAARNVLVKSPNHVKITDFGLARL  158 (279)
T ss_pred             EEEcCCCCCHHHHHhhcc----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccccceEEEcCCCcEEECCCCceee
Confidence            999999999999987642    358899999999999999999999   9999999999999999999999999999987


Q ss_pred             ccCCCCC-cccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhhcccchhH
Q 048419          485 YEHGANP-QTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELHLEGEITQ  562 (653)
Q Consensus       485 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~  562 (653)
                      ....... ......++..|+|||...+..++.++|||||||++|||++ |..|+.......   +..++......     
T Consensus       159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~---~~~~~~~~~~~-----  230 (279)
T cd05109         159 LDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPARE---IPDLLEKGERL-----  230 (279)
T ss_pred             cccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH---HHHHHHCCCcC-----
Confidence            6432211 1112234678999999988889999999999999999998 889987543321   11222111000     


Q ss_pred             hhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcCC
Q 048419          563 AIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLGD  607 (653)
Q Consensus       563 ~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  607 (653)
                             .........+.+++.+||+.||++||++.++++.|+..
T Consensus       231 -------~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~  268 (279)
T cd05109         231 -------PQPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRM  268 (279)
T ss_pred             -------CCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHh
Confidence                   01112345688999999999999999999999988654

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=100.00  E-value=8.1e-37  Score=315.24  Aligned_cols=266  Identities=23%  Similarity=0.349  Sum_probs=202.3

Q ss_pred             cCcCcceeeeeeCcEEEEEEEe----CCCCcEEEEEEeccC-chhhHHHHHHHHHHHhhcCCCceeeeeeeeccc--cee
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLM----PSLGLEVAIKRIGHN-SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQ--DEL  402 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~----~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~--~~~  402 (653)
                      +.|...+.||+|+||.||++..    ..++..||+|.+... .....+.+.+|++++++++|+|++++++++...  ...
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~   83 (284)
T cd05079           4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI   83 (284)
T ss_pred             hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCce
Confidence            3467789999999999999974    345788999998654 344456899999999999999999999998775  568


Q ss_pred             EEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCc
Q 048419          403 LLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLA  482 (653)
Q Consensus       403 ~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla  482 (653)
                      ++||||+++++|.+++....    ..+++.+++.++.|++.||+|||+   ++++||||||+||+++.++.+||+|||++
T Consensus        84 ~lv~e~~~g~~L~~~l~~~~----~~~~~~~~~~i~~~i~~aL~~lH~---~gi~H~dlkp~Nil~~~~~~~~l~dfg~~  156 (284)
T cd05079          84 KLIMEFLPSGSLKEYLPRNK----NKINLKQQLKYAVQICKGMDYLGS---RQYVHRDLAARNVLVESEHQVKIGDFGLT  156 (284)
T ss_pred             EEEEEccCCCCHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecccchheEEEcCCCCEEECCCccc
Confidence            99999999999999986542    348999999999999999999999   99999999999999999999999999999


Q ss_pred             ccccCCCCC--cccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccc-
Q 048419          483 KIYEHGANP--QTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGE-  559 (653)
Q Consensus       483 ~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~-  559 (653)
                      +........  ......++..|+|||.+.+..++.++|||||||++|||++++.|.......    ....+........ 
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~----~~~~~~~~~~~~~~  232 (284)
T cd05079         157 KAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTL----FLKMIGPTHGQMTV  232 (284)
T ss_pred             cccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccch----hhhhcccccccccH
Confidence            866432211  112345677899999998888999999999999999999987764322110    0000000000000 


Q ss_pred             --hhHhhhhcc-CcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          560 --ITQAIDQTL-DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       560 --~~~~~d~~l-~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                        ..+.+.... .......+..+.+++.+||+.+|.+||++.++++.|+.
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~  282 (284)
T cd05079         233 TRLVRVLEEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEA  282 (284)
T ss_pred             HHHHHHHHcCccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHh
Confidence              000000000 01112245679999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=100.00  E-value=1.4e-36  Score=310.66  Aligned_cols=254  Identities=30%  Similarity=0.462  Sum_probs=203.8

Q ss_pred             CcCcceeeeeeCcEEEEEEEeCCCCc---EEEEEEeccC-chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEE
Q 048419          331 GFGEQNLVGSGGFGRVYRGLMPSLGL---EVAIKRIGHN-SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVY  406 (653)
Q Consensus       331 ~f~~~~~LG~G~fg~Vy~~~~~~~~~---~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  406 (653)
                      .|+..+.||+|+||.||+|....++.   .||||.+... .....+.|..|+..+++++||||+++++++.+.+..++||
T Consensus         5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~   84 (269)
T cd05065           5 CVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIIT   84 (269)
T ss_pred             HeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEEE
Confidence            46678999999999999999876554   6999998754 3445678999999999999999999999999999999999


Q ss_pred             eccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccccc
Q 048419          407 DYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE  486 (653)
Q Consensus       407 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~  486 (653)
                      ||+++++|.+++....    ..+++.+++.++.|++.||.|||+   ++++|+||||+||+++.++.+||+|||++....
T Consensus        85 e~~~~~~L~~~l~~~~----~~~~~~~~~~i~~~l~~al~~lH~---~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~  157 (269)
T cd05065          85 EFMENGALDSFLRQND----GQFTVIQLVGMLRGIAAGMKYLSE---MNYVHRDLAARNILVNSNLVCKVSDFGLSRFLE  157 (269)
T ss_pred             ecCCCCcHHHHHhhCC----CCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccChheEEEcCCCcEEECCCccccccc
Confidence            9999999999987643    348899999999999999999999   899999999999999999999999999987654


Q ss_pred             CCCCCc--ccccc--cCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhhcccchh
Q 048419          487 HGANPQ--TTHIV--GTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELHLEGEIT  561 (653)
Q Consensus       487 ~~~~~~--~~~~~--gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~  561 (653)
                      ......  .....  .+..|+|||.+....++.++|||||||++|||++ |..||.......   ..+++....   .  
T Consensus       158 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~---~~~~i~~~~---~--  229 (269)
T cd05065         158 DDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD---VINAIEQDY---R--  229 (269)
T ss_pred             cCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHH---HHHHHHcCC---c--
Confidence            322111  11111  2457999999998899999999999999999886 999987544321   222221110   0  


Q ss_pred             HhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          562 QAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       562 ~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                            + ....+.+..+.+++..||+.+|.+||++.+|++.|+.
T Consensus       230 ------~-~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  267 (269)
T cd05065         230 ------L-PPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDK  267 (269)
T ss_pred             ------C-CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHh
Confidence                  0 0011234568899999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>PTZ00284 protein kinase; Provisional

Probab=100.00  E-value=1.4e-36  Score=335.65  Aligned_cols=269  Identities=20%  Similarity=0.244  Sum_probs=199.3

Q ss_pred             HHHhhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCC------Cceeeeeeeecc
Q 048419          325 LASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRH------RNLVQLHGWCRK  398 (653)
Q Consensus       325 l~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H------~niv~l~g~~~~  398 (653)
                      +...+++|.+.++||+|+||+||+|.+...++.||||+++... ...+.+..|+.++++++|      .+++++++++..
T Consensus       124 ~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~  202 (467)
T PTZ00284        124 IDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQN  202 (467)
T ss_pred             cccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEc
Confidence            3345678999999999999999999998889999999996432 223455667777777654      458899998866


Q ss_pred             c-ceeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCC-----
Q 048419          399 Q-DELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYL-----  472 (653)
Q Consensus       399 ~-~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~-----  472 (653)
                      . +++++|||++ +++|.+++...     ..+++.++..|+.||+.||.|||+.  .+|+||||||+|||++.++     
T Consensus       203 ~~~~~~iv~~~~-g~~l~~~l~~~-----~~l~~~~~~~i~~qi~~aL~yLH~~--~gIiHrDlKP~NILl~~~~~~~~~  274 (467)
T PTZ00284        203 ETGHMCIVMPKY-GPCLLDWIMKH-----GPFSHRHLAQIIFQTGVALDYFHTE--LHLMHTDLKPENILMETSDTVVDP  274 (467)
T ss_pred             CCceEEEEEecc-CCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHhc--CCeecCCCCHHHEEEecCCccccc
Confidence            5 4789999988 77898888654     3489999999999999999999972  4999999999999998765     


Q ss_pred             -----------cEEEEeecCcccccCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhh
Q 048419          473 -----------NAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKA  541 (653)
Q Consensus       473 -----------~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~  541 (653)
                                 .+||+|||++.....    ......||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus       275 ~~~~~~~~~~~~vkl~DfG~~~~~~~----~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~  350 (467)
T PTZ00284        275 VTNRALPPDPCRVRICDLGGCCDERH----SRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDN  350 (467)
T ss_pred             ccccccCCCCceEEECCCCccccCcc----ccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh
Confidence                       499999998864322    22345789999999999999999999999999999999999999986554


Q ss_pred             hhHHHHHHHHHhhhc--------ccchhHhhhh------c---------cC---cCCHHHHHHHHHHHHHcCCCCCCCCC
Q 048419          542 AAELLLVDWVKELHL--------EGEITQAIDQ------T---------LD---YYDLAEAELVLNLGLFCSAPNPVYRP  595 (653)
Q Consensus       542 ~~~~~l~~~~~~~~~--------~~~~~~~~d~------~---------l~---~~~~~~~~~l~~l~~~Cl~~dP~~RP  595 (653)
                      .+...+.........        .....+..+.      .         ..   .........+.+|+.+||+.||.+||
T Consensus       351 ~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~  430 (467)
T PTZ00284        351 LEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRL  430 (467)
T ss_pred             HHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCC
Confidence            332222211100000        0000000000      0         00   00011235678999999999999999


Q ss_pred             CHHHHHHHHcC
Q 048419          596 DMRRVVEFLLG  606 (653)
Q Consensus       596 s~~evl~~L~~  606 (653)
                      |+.|++++-.-
T Consensus       431 ta~e~L~Hp~~  441 (467)
T PTZ00284        431 NARQMTTHPYV  441 (467)
T ss_pred             CHHHHhcCccc
Confidence            99999986543

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=100.00  E-value=1.2e-36  Score=321.33  Aligned_cols=257  Identities=23%  Similarity=0.263  Sum_probs=201.1

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC---chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN---SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVY  406 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  406 (653)
                      ++|...+.||+|+||.||++....+++.||+|.+...   .......+.+|..++..++|+||+++++++.+.+..++||
T Consensus         1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~   80 (331)
T cd05624           1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM   80 (331)
T ss_pred             CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence            4688899999999999999999988999999998642   2233456788999999999999999999999999999999


Q ss_pred             eccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccccc
Q 048419          407 DYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE  486 (653)
Q Consensus       407 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~  486 (653)
                      ||+++|+|.+++....    ..+++..+..++.|++.||+|||+   ++|+||||||+|||++.++.+||+|||+++...
T Consensus        81 Ey~~gg~L~~~l~~~~----~~l~~~~~~~~~~qi~~~L~~lH~---~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~  153 (331)
T cd05624          81 DYYVGGDLLTLLSKFE----DRLPEDMARFYIAEMVLAIHSIHQ---LHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMN  153 (331)
T ss_pred             eCCCCCcHHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCchHHEEEcCCCCEEEEeccceeecc
Confidence            9999999999997632    347888999999999999999999   999999999999999999999999999998664


Q ss_pred             CCCCCcccccccCCcccCcccccc-----CCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchh
Q 048419          487 HGANPQTTHIVGTLGYLAPELTRT-----GKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEIT  561 (653)
Q Consensus       487 ~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~  561 (653)
                      ...........||+.|+|||++.+     +.++.++|||||||++|||++|+.||.........   ..+   .......
T Consensus       154 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~---~~i---~~~~~~~  227 (331)
T cd05624         154 QDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETY---GKI---MNHEERF  227 (331)
T ss_pred             CCCceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHH---HHH---HcCCCcc
Confidence            433222233569999999999875     46788999999999999999999999754432110   000   0000000


Q ss_pred             HhhhhccCcCCHHHHHHHHHHHHHcCCCCCCC--CCCHHHHHHHH
Q 048419          562 QAIDQTLDYYDLAEAELVLNLGLFCSAPNPVY--RPDMRRVVEFL  604 (653)
Q Consensus       562 ~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~--RPs~~evl~~L  604 (653)
                      . +.+..    ....+.+.+++.+|++.++.+  |+++.+++++.
T Consensus       228 ~-~p~~~----~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h~  267 (331)
T cd05624         228 Q-FPSHI----TDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHA  267 (331)
T ss_pred             c-CCCcc----ccCCHHHHHHHHHHccCchhhcCCCCHHHHhcCC
Confidence            0 00101    112456788888888865544  56888888764

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.5e-36  Score=315.17  Aligned_cols=264  Identities=23%  Similarity=0.360  Sum_probs=202.5

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCC--------------CcEEEEEEeccC-chhhHHHHHHHHHHHhhcCCCceeeeee
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSL--------------GLEVAIKRIGHN-SQQGMKEFVAEIMSMGRLRHRNLVQLHG  394 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~--------------~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g  394 (653)
                      ++|+..+.||+|+||.||++...+.              ...||+|.+... .......+.+|++.+++++|+|++++++
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~   84 (295)
T cd05097           5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG   84 (295)
T ss_pred             HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence            5688889999999999999987532              235899998654 3344567899999999999999999999


Q ss_pred             eecccceeEEEEeccCCCCchhhhhccccc-------ccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEE
Q 048419          395 WCRKQDELLLVYDYVPNGSLDKLLFDKDHK-------LRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNIL  467 (653)
Q Consensus       395 ~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~-------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIl  467 (653)
                      ++...+..++||||+++++|.+++......       ....+++.+++.++.|++.||+|||+   ++++|+||||+||+
T Consensus        85 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~---~~i~H~dlkp~Nil  161 (295)
T cd05097          85 VCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLAS---LNFVHRDLATRNCL  161 (295)
T ss_pred             EEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHh---cCeeccccChhhEE
Confidence            999999999999999999999998653210       01246889999999999999999999   89999999999999


Q ss_pred             EcCCCcEEEEeecCcccccCCCC-CcccccccCCcccCccccccCCCCCccceeehHHHHHHHHh--CCCCCChhhhhhH
Q 048419          468 LDTYLNAKLGDFGLAKIYEHGAN-PQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC--GRRSIEPQKAAAE  544 (653)
Q Consensus       468 l~~~~~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt--G~~p~~~~~~~~~  544 (653)
                      ++.++.+||+|||++........ .......++..|+|||.+.+..++.++|||||||+++||++  |..||........
T Consensus       162 l~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~~  241 (295)
T cd05097         162 VGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQV  241 (295)
T ss_pred             EcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHHH
Confidence            99999999999999976533221 11222345678999999988899999999999999999998  5567765432211


Q ss_pred             HHHHHHHHhhhcc-cchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          545 LLLVDWVKELHLE-GEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       545 ~~l~~~~~~~~~~-~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                         ...+...... +....      ..........+.+|+.+||+.+|.+||++.+|++.|.
T Consensus       242 ---~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~  294 (295)
T cd05097         242 ---IENTGEFFRNQGRQIY------LSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR  294 (295)
T ss_pred             ---HHHHHHhhhhcccccc------CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence               1111110000 00000      0001112467999999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=100.00  E-value=1.3e-36  Score=317.71  Aligned_cols=263  Identities=27%  Similarity=0.369  Sum_probs=207.0

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC-chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEec
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN-SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDY  408 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~  408 (653)
                      ++|+..+.||+|+||.||++.+..++..+|+|.+... .....+.+.+|++++++++||||+++++.|.+.+..++||||
T Consensus         1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey   80 (308)
T cd06615           1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEH   80 (308)
T ss_pred             CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeec
Confidence            4688899999999999999999988999999998654 333456788999999999999999999999999999999999


Q ss_pred             cCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCC
Q 048419          409 VPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHG  488 (653)
Q Consensus       409 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~  488 (653)
                      +++++|.+++...     ..+++..+..++.|+++||.|||+.  .+++|+||||+||+++.++.+||+|||++......
T Consensus        81 ~~~~~L~~~l~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~--~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~  153 (308)
T cd06615          81 MDGGSLDQVLKKA-----GRIPENILGKISIAVLRGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS  153 (308)
T ss_pred             cCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhh--CCEEECCCChHHEEEecCCcEEEccCCCccccccc
Confidence            9999999999654     3478899999999999999999972  48999999999999999999999999998755322


Q ss_pred             CCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhccc----------
Q 048419          489 ANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEG----------  558 (653)
Q Consensus       489 ~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~----------  558 (653)
                         ......++..|+|||.+.+..++.++|||||||++|||++|+.|+.......   ...+........          
T Consensus       154 ---~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~  227 (308)
T cd06615         154 ---MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKE---LEAMFGRPVSEGEAKESHRPVS  227 (308)
T ss_pred             ---ccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhh---HHHhhcCccccccccCCccccc
Confidence               1233468899999999988889999999999999999999999986543221   111111100000          


Q ss_pred             ----------chhHhhhhccCc----C-CHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          559 ----------EITQAIDQTLDY----Y-DLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       559 ----------~~~~~~d~~l~~----~-~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                                ...+..+.....    . .......+.+++.+||+.+|++||++.||+++..
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~  289 (308)
T cd06615         228 GHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPF  289 (308)
T ss_pred             CCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcChh
Confidence                      000111111100    0 0012456889999999999999999999998764

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=100.00  E-value=1.9e-36  Score=314.54  Aligned_cols=254  Identities=25%  Similarity=0.373  Sum_probs=208.5

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEecc
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYV  409 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~  409 (653)
                      ++|+..+.||.|++|.||+|....+++.|++|.+........+.+.+|+..++.++|+|++++++++...+..++|+||+
T Consensus        19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   98 (296)
T cd06655          19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYL   98 (296)
T ss_pred             ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEec
Confidence            46888999999999999999998889999999997665555678899999999999999999999999999999999999


Q ss_pred             CCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCC
Q 048419          410 PNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGA  489 (653)
Q Consensus       410 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~  489 (653)
                      ++++|.+++...      .+++.++..++.|++.||.|||+   .+++|+||||+||+++.++.+||+|||++.......
T Consensus        99 ~~~~L~~~~~~~------~l~~~~~~~i~~~l~~al~~LH~---~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~  169 (296)
T cd06655          99 AGGSLTDVVTET------CMDEAQIAAVCRECLQALEFLHA---NQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQ  169 (296)
T ss_pred             CCCcHHHHHHhc------CCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEccCccchhccccc
Confidence            999999988542      38899999999999999999999   899999999999999999999999999988654332


Q ss_pred             CCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhccC
Q 048419          490 NPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLD  569 (653)
Q Consensus       490 ~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~  569 (653)
                      . ......++..|+|||.+.+..++.++|||||||++|||++|+.||...........   +..   .. .     +.+ 
T Consensus       170 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~---~~~---~~-~-----~~~-  235 (296)
T cd06655         170 S-KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYL---IAT---NG-T-----PEL-  235 (296)
T ss_pred             c-cCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH---HHh---cC-C-----ccc-
Confidence            2 12234688899999999988899999999999999999999999976544322110   000   00 0     000 


Q ss_pred             cCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          570 YYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       570 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                      .........+.+++.+||+.||.+||++.+++++=.-
T Consensus       236 ~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~~~~  272 (296)
T cd06655         236 QNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFL  272 (296)
T ss_pred             CCcccCCHHHHHHHHHHhhcChhhCCCHHHHhhChHh
Confidence            0111223567889999999999999999999975543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=100.00  E-value=1.7e-36  Score=309.60  Aligned_cols=249  Identities=25%  Similarity=0.399  Sum_probs=201.8

Q ss_pred             cCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCch---------hhHHHHHHHHHHHhhcCCCceeeeeeeeccccee
Q 048419          332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQ---------QGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDEL  402 (653)
Q Consensus       332 f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~---------~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~  402 (653)
                      |...+.||+|++|.||+|....++..+|+|.+.....         +..+.+..|+.++++++|+||+++++++.+.+..
T Consensus         2 ~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   81 (267)
T cd06628           2 WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHL   81 (267)
T ss_pred             ccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCcc
Confidence            5667899999999999999988899999998864322         1235688899999999999999999999999999


Q ss_pred             EEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCc
Q 048419          403 LLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLA  482 (653)
Q Consensus       403 ~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla  482 (653)
                      ++|+||+++++|.+++...     ..+++..+..++.|++.||+|||+   .+++|+||+|+||++++++.+||+|||++
T Consensus        82 ~lv~e~~~~~~L~~~l~~~-----~~l~~~~~~~~~~~l~~~l~~lH~---~~ivH~di~p~nil~~~~~~~~l~dfg~~  153 (267)
T cd06628          82 NIFLEYVPGGSVAALLNNY-----GAFEETLVRNFVRQILKGLNYLHN---RGIIHRDIKGANILVDNKGGIKISDFGIS  153 (267)
T ss_pred             EEEEEecCCCCHHHHHHhc-----cCccHHHHHHHHHHHHHHHHHHHh---cCcccccCCHHHEEEcCCCCEEecccCCC
Confidence            9999999999999999654     347888999999999999999999   89999999999999999999999999999


Q ss_pred             ccccCCCCC-----cccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcc
Q 048419          483 KIYEHGANP-----QTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLE  557 (653)
Q Consensus       483 ~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~  557 (653)
                      +........     ......|+..|+|||.+.+..++.++|||||||++|||++|+.||..........      ..   
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~------~~---  224 (267)
T cd06628         154 KKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIF------KI---  224 (267)
T ss_pred             cccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHH------HH---
Confidence            876532111     1112357889999999988889999999999999999999999997643321110      00   


Q ss_pred             cchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 048419          558 GEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEF  603 (653)
Q Consensus       558 ~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  603 (653)
                         .....   ...+......+.+++.+||+.+|.+||++.|++++
T Consensus       225 ---~~~~~---~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  264 (267)
T cd06628         225 ---GENAS---PEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLKH  264 (267)
T ss_pred             ---hccCC---CcCCcccCHHHHHHHHHHccCCchhCcCHHHHhhC
Confidence               00000   11112234678899999999999999999999874

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=100.00  E-value=1.9e-36  Score=319.87  Aligned_cols=257  Identities=22%  Similarity=0.248  Sum_probs=199.6

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC---chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN---SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVY  406 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  406 (653)
                      ++|...+.||+|+||.||++....+++.+|+|++.+.   .....+.+..|+.++..++|+||+++++++.+.+.+++||
T Consensus         1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (332)
T cd05623           1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM   80 (332)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence            4688899999999999999999988999999998542   2223445788999999999999999999999999999999


Q ss_pred             eccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccccc
Q 048419          407 DYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE  486 (653)
Q Consensus       407 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~  486 (653)
                      ||+++|+|.+++....    ..+++..+..++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||++....
T Consensus        81 ey~~~g~L~~~l~~~~----~~l~~~~~~~~~~qi~~al~~lH~---~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~  153 (332)
T cd05623          81 DYYVGGDLLTLLSKFE----DRLPEDMARFYLAEMVIAIDSVHQ---LHYVHRDIKPDNILMDMNGHIRLADFGSCLKLM  153 (332)
T ss_pred             eccCCCcHHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHEEECCCCCEEEeecchheecc
Confidence            9999999999997632    348888999999999999999999   999999999999999999999999999987653


Q ss_pred             CCCCCcccccccCCcccCccccc-----cCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchh
Q 048419          487 HGANPQTTHIVGTLGYLAPELTR-----TGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEIT  561 (653)
Q Consensus       487 ~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~  561 (653)
                      ...........||+.|+|||++.     ...++.++|||||||++|||++|+.||.........   ..+........  
T Consensus       154 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~---~~i~~~~~~~~--  228 (332)
T cd05623         154 EDGTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETY---GKIMNHKERFQ--  228 (332)
T ss_pred             cCCcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHH---HHHhCCCcccc--
Confidence            33222223357999999999986     345788999999999999999999999765432211   11110000000  


Q ss_pred             HhhhhccCcCCHHHHHHHHHHHHHcCCCC--CCCCCCHHHHHHHH
Q 048419          562 QAIDQTLDYYDLAEAELVLNLGLFCSAPN--PVYRPDMRRVVEFL  604 (653)
Q Consensus       562 ~~~d~~l~~~~~~~~~~l~~l~~~Cl~~d--P~~RPs~~evl~~L  604 (653)
                            ...........+.+++.+|+..+  +..||++.|++++-
T Consensus       229 ------~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h~  267 (332)
T cd05623         229 ------FPAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQHP  267 (332)
T ss_pred             ------CCCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCCC
Confidence                  00001122456777888877554  44478999999874

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.4e-36  Score=309.15  Aligned_cols=255  Identities=28%  Similarity=0.438  Sum_probs=206.2

Q ss_pred             hcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEec
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDY  408 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~  408 (653)
                      .++|...+.||+|+||.||+|...+ +..+|||.+.... ...+++.+|+..+++++|+|++++++++......++||||
T Consensus         5 ~~~~~i~~~ig~g~~~~v~~~~~~~-~~~~~vK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   82 (261)
T cd05034           5 RESLKLERKLGAGQFGEVWMGTWNG-TTKVAVKTLKPGT-MSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEY   82 (261)
T ss_pred             hhheeeeeeeccCcceEEEEEEEcC-CceEEEEEecCCc-cCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEec
Confidence            3578889999999999999999764 5789999986543 2356789999999999999999999999988899999999


Q ss_pred             cCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCC
Q 048419          409 VPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHG  488 (653)
Q Consensus       409 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~  488 (653)
                      +++++|.+++....   ...+++.++..++.|++.||.|||+   ++++|+||||+||++++++.+||+|||++......
T Consensus        83 ~~~~~L~~~i~~~~---~~~~~~~~~~~~~~~i~~al~~lh~---~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~  156 (261)
T cd05034          83 MSKGSLLDFLKSGE---GKKLRLPQLVDMAAQIAEGMAYLES---RNYIHRDLAARNILVGENLVCKIADFGLARLIEDD  156 (261)
T ss_pred             cCCCCHHHHHhccc---cCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCcchheEEEcCCCCEEECccccceeccch
Confidence            99999999997653   2458999999999999999999999   89999999999999999999999999999866432


Q ss_pred             CCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhc
Q 048419          489 ANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQT  567 (653)
Q Consensus       489 ~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~  567 (653)
                      .........++..|+|||.+.+..++.++||||||++++||++ |+.||.......   ..+.+.....           
T Consensus       157 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~---~~~~~~~~~~-----------  222 (261)
T cd05034         157 EYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNRE---VLEQVERGYR-----------  222 (261)
T ss_pred             hhhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH---HHHHHHcCCC-----------
Confidence            2222222234568999999998889999999999999999999 999986543321   1111111000           


Q ss_pred             cCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          568 LDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       568 l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                      . ..+......+.+++.+|++.+|.+||++.++.+.|+.
T Consensus       223 ~-~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~  260 (261)
T cd05034         223 M-PRPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED  260 (261)
T ss_pred             C-CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence            0 0011124578999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.4e-36  Score=307.25  Aligned_cols=255  Identities=25%  Similarity=0.335  Sum_probs=208.7

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEecc
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYV  409 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~  409 (653)
                      ++|...+.||+|+||.||+|....+++.+++|.+.....+..+.+.+|++++++++|+||+++++++...+.++++|||+
T Consensus         3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~   82 (262)
T cd06613           3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYC   82 (262)
T ss_pred             cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCC
Confidence            57888999999999999999998888999999998766667788999999999999999999999999999999999999


Q ss_pred             CCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCC
Q 048419          410 PNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGA  489 (653)
Q Consensus       410 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~  489 (653)
                      ++++|.+++....    ..+++.+++.++.|++.||.|||+   ++++|+||+|+||+++.++.+||+|||++.......
T Consensus        83 ~~~~l~~~~~~~~----~~l~~~~~~~~~~ql~~~l~~lh~---~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~  155 (262)
T cd06613          83 GGGSLQDIYQVTR----GPLSELQIAYVCRETLKGLAYLHE---TGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATI  155 (262)
T ss_pred             CCCcHHHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHHh---CCceecCCChhhEEECCCCCEEECccccchhhhhhh
Confidence            9999999886642    348899999999999999999999   899999999999999999999999999998654321


Q ss_pred             CCcccccccCCcccCccccccC---CCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhh
Q 048419          490 NPQTTHIVGTLGYLAPELTRTG---KATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQ  566 (653)
Q Consensus       490 ~~~~~~~~gt~~y~aPE~~~~~---~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  566 (653)
                       .......++..|+|||.+.+.   .++.++|||||||++|||++|+.|+...........  ......        ...
T Consensus       156 -~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~--~~~~~~--------~~~  224 (262)
T cd06613         156 -AKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFL--ISKSNF--------PPP  224 (262)
T ss_pred             -hccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHH--HHhccC--------CCc
Confidence             122334678899999998776   789999999999999999999999976443221110  000000        000


Q ss_pred             ccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 048419          567 TLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEF  603 (653)
Q Consensus       567 ~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  603 (653)
                      .+ .........+.+++.+||+.+|.+||++.+|+.+
T Consensus       225 ~~-~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~  260 (262)
T cd06613         225 KL-KDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQH  260 (262)
T ss_pred             cc-cchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            01 1112335678999999999999999999999864

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=100.00  E-value=1.8e-36  Score=312.20  Aligned_cols=253  Identities=23%  Similarity=0.337  Sum_probs=204.4

Q ss_pred             cCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEeccCC
Q 048419          332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPN  411 (653)
Q Consensus       332 f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~  411 (653)
                      |+..+.||+|+||.||+|....++..+++|.+........+.+.+|+++++.++|+|++++++++...+..++|+||+++
T Consensus         7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~   86 (282)
T cd06643           7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG   86 (282)
T ss_pred             HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCC
Confidence            45567899999999999999988999999999776666778899999999999999999999999999999999999999


Q ss_pred             CCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCCCC
Q 048419          412 GSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANP  491 (653)
Q Consensus       412 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~  491 (653)
                      ++|..++...    ...+++..+..++.|+++||.|||+   .+++|+||||+||+++.++.+||+|||++....... .
T Consensus        87 ~~l~~~~~~~----~~~l~~~~~~~~~~qi~~~L~~LH~---~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~-~  158 (282)
T cd06643          87 GAVDAVMLEL----ERPLTEPQIRVVCKQTLEALNYLHE---NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI-Q  158 (282)
T ss_pred             CcHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCcccEEEccCCCEEEccccccccccccc-c
Confidence            9999887653    2358999999999999999999999   899999999999999999999999999987643221 1


Q ss_pred             cccccccCCcccCccccc-----cCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhh
Q 048419          492 QTTHIVGTLGYLAPELTR-----TGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQ  566 (653)
Q Consensus       492 ~~~~~~gt~~y~aPE~~~-----~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  566 (653)
                      ......++..|+|||++.     ...++.++|||||||++|||++|+.||........  ........          .+
T Consensus       159 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~--~~~~~~~~----------~~  226 (282)
T cd06643         159 RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRV--LLKIAKSE----------PP  226 (282)
T ss_pred             ccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHH--HHHHhhcC----------CC
Confidence            223346889999999874     34577899999999999999999999875433211  11111100          00


Q ss_pred             ccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          567 TLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       567 ~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                      .+ ..+......+.+++.+||+.+|.+||++.+++++-.
T Consensus       227 ~~-~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~  264 (282)
T cd06643         227 TL-AQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQHPF  264 (282)
T ss_pred             CC-CCccccCHHHHHHHHHHccCChhhCcCHHHHhcCCC
Confidence            00 011122356889999999999999999999987664

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=100.00  E-value=2.4e-36  Score=313.70  Aligned_cols=265  Identities=23%  Similarity=0.344  Sum_probs=203.8

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeC----------------CCCcEEEEEEeccC-chhhHHHHHHHHHHHhhcCCCceeee
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMP----------------SLGLEVAIKRIGHN-SQQGMKEFVAEIMSMGRLRHRNLVQL  392 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~----------------~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l  392 (653)
                      ++|+..+.||+|+||.||++...                .++..+|+|.+... .......+.+|+..+++++|+||+++
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~   84 (296)
T cd05095           5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRL   84 (296)
T ss_pred             hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence            56888999999999999998543                23457999998754 34455789999999999999999999


Q ss_pred             eeeecccceeEEEEeccCCCCchhhhhcccccc------cccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcE
Q 048419          393 HGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKL------RKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNI  466 (653)
Q Consensus       393 ~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NI  466 (653)
                      ++++...+..++||||+++++|.+++.......      ...+++.+++.++.|++.||+|||+   .+++|+||||+||
T Consensus        85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~---~~i~H~dlkp~Ni  161 (296)
T cd05095          85 LAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSS---LNFVHRDLATRNC  161 (296)
T ss_pred             EEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHH---CCeecccCChheE
Confidence            999999999999999999999999997643211      2347888999999999999999999   8999999999999


Q ss_pred             EEcCCCcEEEEeecCcccccCCCCC-cccccccCCcccCccccccCCCCCccceeehHHHHHHHHh--CCCCCChhhhhh
Q 048419          467 LLDTYLNAKLGDFGLAKIYEHGANP-QTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC--GRRSIEPQKAAA  543 (653)
Q Consensus       467 ll~~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt--G~~p~~~~~~~~  543 (653)
                      |++.++.+||+|||+++.+...... ......++..|+|||....+.++.++|||||||++|||++  |..|+.......
T Consensus       162 li~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~  241 (296)
T cd05095         162 LVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQ  241 (296)
T ss_pred             EEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChHH
Confidence            9999999999999999865432211 1122334678999999888889999999999999999998  667886543321


Q ss_pred             HHHHHHHHHhhhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          544 ELLLVDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       544 ~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                      ..   ............ ....+    .+..+...+.+++.+||+.||.+||++.+|++.|+
T Consensus       242 ~~---~~~~~~~~~~~~-~~~~~----~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~  295 (296)
T cd05095         242 VI---ENTGEFFRDQGR-QVYLP----KPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLL  295 (296)
T ss_pred             HH---HHHHHHHhhccc-cccCC----CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence            11   111110000000 00000    11123467889999999999999999999999885

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=100.00  E-value=1.3e-36  Score=310.75  Aligned_cols=255  Identities=29%  Similarity=0.449  Sum_probs=204.1

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCC---CcEEEEEEeccCc-hhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSL---GLEVAIKRIGHNS-QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLV  405 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~---~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV  405 (653)
                      .+|...+.||+|+||.||+|.+..+   +..+|+|.+.... ....+.+..|+..+++++||||+++++++...+..++|
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   83 (267)
T cd05066           4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV   83 (267)
T ss_pred             HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence            4677889999999999999987533   3479999986543 33456889999999999999999999999999999999


Q ss_pred             EeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccc
Q 048419          406 YDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIY  485 (653)
Q Consensus       406 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~  485 (653)
                      |||+++++|.+++....    ..+++.+++.++.|++.||.|||+   ++++|+||||+|||++.++.+||+|||++...
T Consensus        84 ~e~~~~~~L~~~~~~~~----~~~~~~~~~~i~~~i~~~l~~lH~---~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~  156 (267)
T cd05066          84 TEYMENGSLDAFLRKHD----GQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILVNSNLVCKVSDFGLSRVL  156 (267)
T ss_pred             EEcCCCCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHH---CCEeehhhchhcEEECCCCeEEeCCCCccccc
Confidence            99999999999997543    347899999999999999999999   99999999999999999999999999999876


Q ss_pred             cCCCCCcc--cccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhhcccchhH
Q 048419          486 EHGANPQT--THIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELHLEGEITQ  562 (653)
Q Consensus       486 ~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~  562 (653)
                      ........  ....++..|+|||.+.+..++.++||||||+++||+++ |+.||......+   ....+....   ..  
T Consensus       157 ~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~---~~~~~~~~~---~~--  228 (267)
T cd05066         157 EDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQD---VIKAIEEGY---RL--  228 (267)
T ss_pred             ccccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHH---HHHHHhCCC---cC--
Confidence            44322111  11223568999999998889999999999999999886 999987544321   111111110   00  


Q ss_pred             hhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          563 AIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       563 ~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                         +    .....+..+.+++.+|++.+|.+||+|.++++.|..
T Consensus       229 ---~----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  265 (267)
T cd05066         229 ---P----APMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDK  265 (267)
T ss_pred             ---C----CCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHh
Confidence               0    011234567899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=100.00  E-value=2.2e-36  Score=313.31  Aligned_cols=255  Identities=24%  Similarity=0.354  Sum_probs=206.1

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEecc
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYV  409 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~  409 (653)
                      +.|++.+.||+|+||.||+|....++..+++|.+........+.+.+|+..+++++|+|++++++.+...+..++||||+
T Consensus        12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   91 (292)
T cd06644          12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFC   91 (292)
T ss_pred             hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecC
Confidence            56778899999999999999999889999999998777777888999999999999999999999999999999999999


Q ss_pred             CCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCC
Q 048419          410 PNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGA  489 (653)
Q Consensus       410 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~  489 (653)
                      ++++|..++.+..    ..+++..++.++.|++.+|.|||+   .+++||||||+||+++.++.+||+|||++.......
T Consensus        92 ~~~~l~~~~~~~~----~~l~~~~~~~~~~ql~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~  164 (292)
T cd06644          92 PGGAVDAIMLELD----RGLTEPQIQVICRQMLEALQYLHS---MKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTL  164 (292)
T ss_pred             CCCcHHHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHhc---CCeeecCCCcceEEEcCCCCEEEccCccceeccccc
Confidence            9999988876542    348899999999999999999999   899999999999999999999999999987543221


Q ss_pred             CCcccccccCCcccCccccc-----cCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhh
Q 048419          490 NPQTTHIVGTLGYLAPELTR-----TGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAI  564 (653)
Q Consensus       490 ~~~~~~~~gt~~y~aPE~~~-----~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  564 (653)
                       .......++..|+|||.+.     ...++.++|||||||++|||++|+.|+........  .....     ....    
T Consensus       165 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~--~~~~~-----~~~~----  232 (292)
T cd06644         165 -QRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRV--LLKIA-----KSEP----  232 (292)
T ss_pred             -cccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHH--HHHHh-----cCCC----
Confidence             1223346788999999884     34467899999999999999999999875432111  11110     0000    


Q ss_pred             hhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          565 DQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       565 d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                       +.+ .........+.+++.+||+.+|++||++.+++++-.
T Consensus       233 -~~~-~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~  271 (292)
T cd06644         233 -PTL-SQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEHPF  271 (292)
T ss_pred             -ccC-CCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcCcc
Confidence             000 011123456889999999999999999999987543

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=100.00  E-value=2.1e-36  Score=306.92  Aligned_cols=251  Identities=24%  Similarity=0.368  Sum_probs=205.8

Q ss_pred             CcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC--chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEec
Q 048419          331 GFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDY  408 (653)
Q Consensus       331 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~  408 (653)
                      +|+..+.||+|+||.+|++....+++.||+|++...  .....+++.+|+..+++++|+||+++++++.+.+..++|+||
T Consensus         1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08218           1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY   80 (256)
T ss_pred             CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence            477889999999999999999888999999998643  334456889999999999999999999999999999999999


Q ss_pred             cCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCC
Q 048419          409 VPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHG  488 (653)
Q Consensus       409 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~  488 (653)
                      +++++|.+++....   ...+++.++++++.|++.||.|||+   ++++|+||+|+||+++.++.++|+|||++......
T Consensus        81 ~~~~~l~~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~  154 (256)
T cd08218          81 CEGGDLYKKINAQR---GVLFPEDQILDWFVQICLALKHVHD---RKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNST  154 (256)
T ss_pred             CCCCcHHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCCCEEEeeccceeecCcc
Confidence            99999999886543   2347889999999999999999999   89999999999999999999999999999865432


Q ss_pred             CCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhcc
Q 048419          489 ANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTL  568 (653)
Q Consensus       489 ~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l  568 (653)
                      .. ......|+..|+|||.+.+...+.++|||||||+++||++|+.|+......+.  .....     .+..        
T Consensus       155 ~~-~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~--~~~~~-----~~~~--------  218 (256)
T cd08218         155 VE-LARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNL--VLKII-----RGSY--------  218 (256)
T ss_pred             hh-hhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHH--HHHHh-----cCCC--------
Confidence            21 12234578899999999988899999999999999999999999875433211  00111     1110        


Q ss_pred             CcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 048419          569 DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEF  603 (653)
Q Consensus       569 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  603 (653)
                      ..........+.+++.+||+.+|.+||++.+|+++
T Consensus       219 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~  253 (256)
T cd08218         219 PPVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEK  253 (256)
T ss_pred             CCCcccCCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence            11112234668899999999999999999999985

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=100.00  E-value=1.3e-36  Score=308.12  Aligned_cols=251  Identities=25%  Similarity=0.388  Sum_probs=206.8

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEecc
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYV  409 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~  409 (653)
                      ++|+..+.||+|+||.||+|....++..+++|.+.....  .+.+.+|++.+++++|+|++++++++......++++||+
T Consensus         3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~   80 (256)
T cd06612           3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYC   80 (256)
T ss_pred             ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecC
Confidence            578889999999999999999988889999999865432  678999999999999999999999999999999999999


Q ss_pred             CCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCC
Q 048419          410 PNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGA  489 (653)
Q Consensus       410 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~  489 (653)
                      ++++|.+++....    ..+++..++.++.|++.||.|||+   .+++|+||+|+||++++++.+||+|||++.......
T Consensus        81 ~~~~L~~~l~~~~----~~l~~~~~~~~~~~l~~~l~~lh~---~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~  153 (256)
T cd06612          81 GAGSVSDIMKITN----KTLTEEEIAAILYQTLKGLEYLHS---NKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTM  153 (256)
T ss_pred             CCCcHHHHHHhCc----cCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcceEEECCCCcEEEcccccchhcccCc
Confidence            9999999986542    458999999999999999999999   899999999999999999999999999998764432


Q ss_pred             CCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhccC
Q 048419          490 NPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLD  569 (653)
Q Consensus       490 ~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~  569 (653)
                      . ......++..|+|||.+.+..++.++||||||+++|||++|+.|+...........   +.    .     ...+.+ 
T Consensus       154 ~-~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~---~~----~-----~~~~~~-  219 (256)
T cd06612         154 A-KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFM---IP----N-----KPPPTL-  219 (256)
T ss_pred             c-ccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhh---hc----c-----CCCCCC-
Confidence            1 22334578899999999988999999999999999999999999976443221110   00    0     000000 


Q ss_pred             cCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 048419          570 YYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEF  603 (653)
Q Consensus       570 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  603 (653)
                      ..+......+.+++.+||+.+|.+||++.||+++
T Consensus       220 ~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~  253 (256)
T cd06612         220 SDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQH  253 (256)
T ss_pred             CchhhcCHHHHHHHHHHHhcChhhCcCHHHHhcC
Confidence            0111234578899999999999999999999874

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=100.00  E-value=2.8e-36  Score=308.59  Aligned_cols=256  Identities=25%  Similarity=0.344  Sum_probs=194.2

Q ss_pred             eeeeeeCcEEEEEEEeCC--CCcEEEEEEeccCc-hhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEeccCCC
Q 048419          336 NLVGSGGFGRVYRGLMPS--LGLEVAIKRIGHNS-QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNG  412 (653)
Q Consensus       336 ~~LG~G~fg~Vy~~~~~~--~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~g  412 (653)
                      +.||+|+||.||+|...+  .+..+|+|.++... ......+.+|+.++++++||||+++++++.+....++||||+++|
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g   80 (269)
T cd05087           1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG   80 (269)
T ss_pred             CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence            358999999999998643  34679999986543 334457889999999999999999999999999999999999999


Q ss_pred             CchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCCCC-
Q 048419          413 SLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANP-  491 (653)
Q Consensus       413 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~-  491 (653)
                      +|.+++..........+++..+..++.|++.||.|||+   ++++|+||||+||+++.++.+||+|||+++........ 
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~  157 (269)
T cd05087          81 DLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHK---NNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYV  157 (269)
T ss_pred             cHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHH---CCEeccccCcceEEEcCCCcEEECCccccccccCcceee
Confidence            99999976432223346777888999999999999999   89999999999999999999999999999754332211 


Q ss_pred             cccccccCCcccCccccccC-------CCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhhcccchhHh
Q 048419          492 QTTHIVGTLGYLAPELTRTG-------KATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELHLEGEITQA  563 (653)
Q Consensus       492 ~~~~~~gt~~y~aPE~~~~~-------~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~  563 (653)
                      ......++..|+|||++...       .++.++||||||+++|||++ |+.||..........   ....    +.....
T Consensus       158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~---~~~~----~~~~~~  230 (269)
T cd05087         158 TPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLT---YTVR----EQQLKL  230 (269)
T ss_pred             cCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHH---HHhh----cccCCC
Confidence            11224567889999988642       35789999999999999996 999997544322111   1000    000111


Q ss_pred             hhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          564 IDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       564 ~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                      .++.+   .....+.+.+++..|+ .+|++|||+.||++.|+
T Consensus       231 ~~~~~---~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~  268 (269)
T cd05087         231 PKPRL---KLPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS  268 (269)
T ss_pred             CCCcc---CCCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence            11111   1112345778899999 58999999999999885

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=100.00  E-value=1.3e-36  Score=313.37  Aligned_cols=266  Identities=25%  Similarity=0.338  Sum_probs=201.4

Q ss_pred             CcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc--hhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEec
Q 048419          331 GFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS--QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDY  408 (653)
Q Consensus       331 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~  408 (653)
                      +|+..+.||+|++|.||+|+...++..||||++....  ....+.+.+|+.++++++|+||+++++++.+++..++||||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (285)
T cd07861           1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF   80 (285)
T ss_pred             CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence            4677899999999999999998889999999986432  23346788999999999999999999999999999999999


Q ss_pred             cCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCC
Q 048419          409 VPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHG  488 (653)
Q Consensus       409 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~  488 (653)
                      ++ ++|.+++.....  ...+++.+++.++.||+.||.|||+   ++++|+||||+||+++.++.+||+|||++......
T Consensus        81 ~~-~~l~~~~~~~~~--~~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~  154 (285)
T cd07861          81 LS-MDLKKYLDSLPK--GQYMDAELVKSYLYQILQGILFCHS---RRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIP  154 (285)
T ss_pred             CC-CCHHHHHhcCCC--CCcCCHHHHHHHHHHHHHHHHHHHh---CCeeecCCCHHHEEEcCCCcEEECcccceeecCCC
Confidence            97 689888865432  3468999999999999999999999   89999999999999999999999999999765332


Q ss_pred             CCCcccccccCCcccCccccccC-CCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHH-HHHHHh----hhcc-cchh
Q 048419          489 ANPQTTHIVGTLGYLAPELTRTG-KATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLL-VDWVKE----LHLE-GEIT  561 (653)
Q Consensus       489 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l-~~~~~~----~~~~-~~~~  561 (653)
                      . .......+++.|+|||.+.+. .++.++|||||||+++||+||+.||..........- ......    .+.. ..+.
T Consensus       155 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (285)
T cd07861         155 V-RVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLP  233 (285)
T ss_pred             c-ccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhH
Confidence            1 112233568899999987654 478899999999999999999999976543221110 000000    0000 0000


Q ss_pred             H---hhhhcc----CcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 048419          562 Q---AIDQTL----DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEF  603 (653)
Q Consensus       562 ~---~~d~~l----~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  603 (653)
                      .   ..+...    ..........+.+++.+||+.||.+|||+.+|+++
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~  282 (285)
T cd07861         234 DYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNH  282 (285)
T ss_pred             HHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcC
Confidence            0   000000    00001124567899999999999999999999865

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.5e-36  Score=311.44  Aligned_cols=251  Identities=25%  Similarity=0.355  Sum_probs=206.5

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc-hhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEec
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS-QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDY  408 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~  408 (653)
                      ++|+..+.||.|++|.||+|....+++.||+|.+.... ......+.+|+.++++++|+|++++++++.+....++|+||
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (274)
T cd06609           1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEY   80 (274)
T ss_pred             ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEe
Confidence            35777889999999999999999889999999986543 44556788999999999999999999999999999999999


Q ss_pred             cCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCC
Q 048419          409 VPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHG  488 (653)
Q Consensus       409 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~  488 (653)
                      +++++|.+++...      .+++..++.++.|++.||.|||+   ++++|+||+|+||++++++.++|+|||+++.....
T Consensus        81 ~~~~~L~~~~~~~------~~~~~~~~~~~~ql~~~l~~lh~---~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~  151 (274)
T cd06609          81 CGGGSCLDLLKPG------KLDETYIAFILREVLLGLEYLHE---EGKIHRDIKAANILLSEEGDVKLADFGVSGQLTST  151 (274)
T ss_pred             eCCCcHHHHHhhc------CCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEEEcccccceeeccc
Confidence            9999999998653      48899999999999999999999   89999999999999999999999999999876543


Q ss_pred             CCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhcc
Q 048419          489 ANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTL  568 (653)
Q Consensus       489 ~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l  568 (653)
                      . .......++..|+|||++.+..++.++||||||+++|||++|+.||........   ...+.    ..     ..+.+
T Consensus       152 ~-~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~---~~~~~----~~-----~~~~~  218 (274)
T cd06609         152 M-SKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRV---LFLIP----KN-----NPPSL  218 (274)
T ss_pred             c-cccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHH---HHHhh----hc-----CCCCC
Confidence            2 222334678899999999988899999999999999999999999975442211   00000    00     01111


Q ss_pred             CcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          569 DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       569 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                      ..  ......+.+++.+||+.+|++||++++++++-
T Consensus       219 ~~--~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~~  252 (274)
T cd06609         219 EG--NKFSKPFKDFVSLCLNKDPKERPSAKELLKHK  252 (274)
T ss_pred             cc--cccCHHHHHHHHHHhhCChhhCcCHHHHhhCh
Confidence            00  00345688999999999999999999998853

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=5.2e-37  Score=323.10  Aligned_cols=260  Identities=29%  Similarity=0.431  Sum_probs=213.4

Q ss_pred             eeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEeccCCCCch
Q 048419          336 NLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSLD  415 (653)
Q Consensus       336 ~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~  415 (653)
                      -+||+|.||+||.|++.++...+|||.+.....+..+.+..|+.+-++|+|+|||+++|.|.+++.+-|.||..|||+|.
T Consensus       581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLS  660 (1226)
T KOG4279|consen  581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLS  660 (1226)
T ss_pred             EEeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHH
Confidence            47999999999999999999999999998877777888999999999999999999999999999999999999999999


Q ss_pred             hhhhcccccccccc--hhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEc-CCCcEEEEeecCcccccCCCCCc
Q 048419          416 KLLFDKDHKLRKLL--TWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLD-TYLNAKLGDFGLAKIYEHGANPQ  492 (653)
Q Consensus       416 ~~l~~~~~~~~~~l--~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~-~~~~~kl~DfGla~~~~~~~~~~  492 (653)
                      ++|...-+    +|  .+...--..+||++||.|||+   +.|||||||-+|||++ -.|.+||+|||-++.+.. .++.
T Consensus       661 sLLrskWG----PlKDNEstm~fYtkQILeGLkYLHe---n~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAg-inP~  732 (1226)
T KOG4279|consen  661 SLLRSKWG----PLKDNESTMNFYTKQILEGLKYLHE---NKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAG-INPC  732 (1226)
T ss_pred             HHHHhccC----CCccchhHHHHHHHHHHHHhhhhhh---cceeeccccCCcEEEeeccceEEecccccchhhcc-CCcc
Confidence            99987643    34  566677789999999999999   9999999999999995 578999999999987653 4566


Q ss_pred             ccccccCCcccCccccccC--CCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhccCc
Q 048419          493 TTHIVGTLGYLAPELTRTG--KATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDY  570 (653)
Q Consensus       493 ~~~~~gt~~y~aPE~~~~~--~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~  570 (653)
                      +..+.||..|||||++..+  .|..++|||||||++.||.||++||..........+.  +-.....           ..
T Consensus       733 TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFk--VGmyKvH-----------P~  799 (1226)
T KOG4279|consen  733 TETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFK--VGMYKVH-----------PP  799 (1226)
T ss_pred             ccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhh--hcceecC-----------CC
Confidence            7778899999999999876  4888999999999999999999999765443221110  0000000           12


Q ss_pred             CCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH--HHcC--CCCCCCCCCc
Q 048419          571 YDLAEAELVLNLGLFCSAPNPVYRPDMRRVVE--FLLG--DSSLPPLPPD  616 (653)
Q Consensus       571 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~--~L~~--~~~~p~~p~~  616 (653)
                      .+.+...+...++++|..+||.+||+++++++  +|.-  .++-|++++.
T Consensus       800 iPeelsaeak~FilrcFepd~~~R~sA~~LL~DpFlq~~~kk~r~~ls~~  849 (1226)
T KOG4279|consen  800 IPEELSAEAKNFILRCFEPDPCDRPSAKDLLQDPFLQHNNKKPRPKLSLN  849 (1226)
T ss_pred             CcHHHHHHHHHHHHHHcCCCcccCccHHHhccCcccccCCCCCCCCCCcc
Confidence            33455678899999999999999999999997  4432  2334444433

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=100.00  E-value=1.1e-36  Score=311.01  Aligned_cols=254  Identities=25%  Similarity=0.353  Sum_probs=203.9

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEecc
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYV  409 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~  409 (653)
                      ++|...+.||+|+||.||+|....+++.||+|.++.........+.+|+.+++.++||||+++++.+...+..++|+||+
T Consensus         9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~   88 (267)
T cd06645           9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFC   88 (267)
T ss_pred             HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEecc
Confidence            46777889999999999999998889999999997665555667889999999999999999999999999999999999


Q ss_pred             CCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCC
Q 048419          410 PNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGA  489 (653)
Q Consensus       410 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~  489 (653)
                      ++++|.+++...     ..+++.+.+.++.|++.||.|||+   .+++|+||||+||+++.++.+||+|||++.......
T Consensus        89 ~~~~L~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~  160 (267)
T cd06645          89 GGGSLQDIYHVT-----GPLSESQIAYVSRETLQGLYYLHS---KGKMHRDIKGANILLTDNGHVKLADFGVSAQITATI  160 (267)
T ss_pred             CCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEECcceeeeEccCcc
Confidence            999999998654     348899999999999999999999   899999999999999999999999999987654322


Q ss_pred             CCcccccccCCcccCccccc---cCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhh
Q 048419          490 NPQTTHIVGTLGYLAPELTR---TGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQ  566 (653)
Q Consensus       490 ~~~~~~~~gt~~y~aPE~~~---~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  566 (653)
                       .......|+..|+|||.+.   ...++.++|||||||++|||++|+.|+....+......  ........        +
T Consensus       161 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~--~~~~~~~~--------~  229 (267)
T cd06645         161 -AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFL--MTKSNFQP--------P  229 (267)
T ss_pred             -cccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHh--hhccCCCC--------C
Confidence             2223446899999999874   45588899999999999999999999865432211110  00000000        0


Q ss_pred             ccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 048419          567 TLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEF  603 (653)
Q Consensus       567 ~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  603 (653)
                      .... .......+.+++.+||+.+|++||++.+|+++
T Consensus       230 ~~~~-~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~  265 (267)
T cd06645         230 KLKD-KMKWSNSFHHFVKMALTKNPKKRPTAEKLLQH  265 (267)
T ss_pred             cccc-cCCCCHHHHHHHHHHccCCchhCcCHHHHhcC
Confidence            0000 00123467899999999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=100.00  E-value=1.7e-36  Score=324.40  Aligned_cols=263  Identities=22%  Similarity=0.259  Sum_probs=201.9

Q ss_pred             hhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC--chhhHHHHHHHHHHHhhcCCCceeeeeeeeccc------
Q 048419          328 VTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQ------  399 (653)
Q Consensus       328 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~------  399 (653)
                      ..++|...+.||+|+||.||++++...++.||||++...  .....+.+.+|+.+++.++|+||+++++++...      
T Consensus        22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~  101 (364)
T cd07875          22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF  101 (364)
T ss_pred             hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence            457899999999999999999999888999999998653  334456788999999999999999999987543      


Q ss_pred             ceeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEee
Q 048419          400 DELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDF  479 (653)
Q Consensus       400 ~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df  479 (653)
                      ...++||||+++ +|..++..       .+++..+..++.|++.||+|||+   ++|+||||||+|||++.++.+||+||
T Consensus       102 ~~~~lv~e~~~~-~l~~~~~~-------~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~Df  170 (364)
T cd07875         102 QDVYIVMELMDA-NLCQVIQM-------ELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDF  170 (364)
T ss_pred             CeEEEEEeCCCC-CHHHHHHh-------cCCHHHHHHHHHHHHHHHHHHhh---CCeecCCCCHHHEEECCCCcEEEEeC
Confidence            357999999965 67766632       37788899999999999999999   89999999999999999999999999


Q ss_pred             cCcccccCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhc---
Q 048419          480 GLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHL---  556 (653)
Q Consensus       480 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~---  556 (653)
                      |+++......  ......+|..|+|||++.+..++.++|||||||++|||++|+.||...+......  ..+.....   
T Consensus       171 G~a~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~--~~~~~~~~~~~  246 (364)
T cd07875         171 GLARTAGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWN--KVIEQLGTPCP  246 (364)
T ss_pred             CCccccCCCC--cccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHH--HHHHhcCCCCH
Confidence            9998654321  2234568999999999999999999999999999999999999997654322111  11100000   


Q ss_pred             ------ccchhHhhh---------------hcc----CcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          557 ------EGEITQAID---------------QTL----DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       557 ------~~~~~~~~d---------------~~l----~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                            ...+...+.               ..+    ..........+.+++.+||+.||.+|||+.|++++-.
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~  320 (364)
T cd07875         247 EFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPY  320 (364)
T ss_pred             HHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCcc
Confidence                  000000000               000    0001112356889999999999999999999998753

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=100.00  E-value=9.7e-37  Score=313.39  Aligned_cols=249  Identities=25%  Similarity=0.366  Sum_probs=203.6

Q ss_pred             CcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc-hhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEecc
Q 048419          331 GFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS-QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYV  409 (653)
Q Consensus       331 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~  409 (653)
                      .|+..+.||+|+||.||+|.+..++..||+|.+.... ....+.+.+|+..+++++|+||+++++++...+..++|+||+
T Consensus         5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   84 (277)
T cd06642           5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYL   84 (277)
T ss_pred             HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEcc
Confidence            3556778999999999999998889999999986543 345567899999999999999999999999999999999999


Q ss_pred             CCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCC
Q 048419          410 PNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGA  489 (653)
Q Consensus       410 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~  489 (653)
                      ++++|.+++...      .+++..+..++.|+++||.|||+   ++++|+||+|+||++++++.+||+|||++.......
T Consensus        85 ~~~~L~~~~~~~------~~~~~~~~~~~~~i~~~l~~lH~---~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~  155 (277)
T cd06642          85 GGGSALDLLKPG------PLEETYIATILREILKGLDYLHS---ERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ  155 (277)
T ss_pred             CCCcHHHHhhcC------CCCHHHHHHHHHHHHHHHHHHhc---CCeeccCCChheEEEeCCCCEEEccccccccccCcc
Confidence            999999988542      37889999999999999999999   899999999999999999999999999998654322


Q ss_pred             CCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhccC
Q 048419          490 NPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLD  569 (653)
Q Consensus       490 ~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~  569 (653)
                      . ......++..|+|||.+.+..++.++|||||||+++||++|+.|+.........   .++.    ...     .   .
T Consensus       156 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~---~~~~----~~~-----~---~  219 (277)
T cd06642         156 I-KRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVL---FLIP----KNS-----P---P  219 (277)
T ss_pred             h-hhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHH---hhhh----cCC-----C---C
Confidence            1 122345788999999999888999999999999999999999998754322110   0000    000     0   1


Q ss_pred             cCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          570 YYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       570 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                      .........+.+++.+||+.+|.+||++.+++++-
T Consensus       220 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~  254 (277)
T cd06642         220 TLEGQYSKPFKEFVEACLNKDPRFRPTAKELLKHK  254 (277)
T ss_pred             CCCcccCHHHHHHHHHHccCCcccCcCHHHHHHhH
Confidence            11123346688999999999999999999999864

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=100.00  E-value=1.4e-36  Score=313.51  Aligned_cols=267  Identities=22%  Similarity=0.273  Sum_probs=209.2

Q ss_pred             ccCHHHHHHhhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhc-CCCceeeeeeeec
Q 048419          319 RFKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRL-RHRNLVQLHGWCR  397 (653)
Q Consensus       319 ~f~~~el~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~  397 (653)
                      .+.+..+..++++|+..+.||+|+||.||++....+++.+|+|.+.... .....+.+|+.+++++ +|+||+++++++.
T Consensus         7 ~~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~   85 (286)
T cd06638           7 TIIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-DIDEEIEAEYNILKALSDHPNVVKFYGMYY   85 (286)
T ss_pred             eEEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc-chHHHHHHHHHHHHHHhcCCCeeeeeeeee
Confidence            3556777788999999999999999999999998889999999985432 2235678899999999 6999999999874


Q ss_pred             -----ccceeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCC
Q 048419          398 -----KQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYL  472 (653)
Q Consensus       398 -----~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~  472 (653)
                           ..+..++||||+++++|.+++...... ...+++..++.++.|+++||.|||+   ++++||||||+||+++.++
T Consensus        86 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~nili~~~~  161 (286)
T cd06638          86 KKDVKNGDQLWLVLELCNGGSVTDLVKGFLKR-GERMEEPIIAYILHEALMGLQHLHV---NKTIHRDVKGNNILLTTEG  161 (286)
T ss_pred             ecccCCCCeEEEEEeecCCCCHHHHHHHhhcc-CccccHHHHHHHHHHHHHHHHHHHh---CCccccCCCHHhEEECCCC
Confidence                 345689999999999999988643211 3457889999999999999999999   8999999999999999999


Q ss_pred             cEEEEeecCcccccCCCCCcccccccCCcccCcccccc-----CCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHH
Q 048419          473 NAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRT-----GKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLL  547 (653)
Q Consensus       473 ~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l  547 (653)
                      .+||+|||+++...... .......|+..|+|||++..     ..++.++|||||||++|||++|+.|+.........  
T Consensus       162 ~~kl~dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~--  238 (286)
T cd06638         162 GVKLVDFGVSAQLTSTR-LRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRAL--  238 (286)
T ss_pred             CEEEccCCceeecccCC-CccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHH--
Confidence            99999999998654322 12233468999999998753     44788999999999999999999998754432111  


Q ss_pred             HHHHHhhhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          548 VDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       548 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                      ...     .........++      ......+.+++.+||+.+|++||++.|+++++
T Consensus       239 ~~~-----~~~~~~~~~~~------~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~  284 (286)
T cd06638         239 FKI-----PRNPPPTLHQP------ELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHV  284 (286)
T ss_pred             hhc-----cccCCCcccCC------CCcCHHHHHHHHHHccCCcccCCCHHHHhhcc
Confidence            000     00000000001      11235688999999999999999999999875

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=100.00  E-value=2.5e-36  Score=306.45  Aligned_cols=249  Identities=29%  Similarity=0.437  Sum_probs=201.4

Q ss_pred             eeeeeeCcEEEEEEEeCC-CC--cEEEEEEeccCch-hhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEeccCC
Q 048419          336 NLVGSGGFGRVYRGLMPS-LG--LEVAIKRIGHNSQ-QGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPN  411 (653)
Q Consensus       336 ~~LG~G~fg~Vy~~~~~~-~~--~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~  411 (653)
                      +.||+|++|.||+|.+.. .+  ..||||.+..... ...+.+.+|+..+++++|+||+++++++.. ...++|+||+++
T Consensus         1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~   79 (257)
T cd05040           1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL   79 (257)
T ss_pred             CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence            368999999999999754 33  3699999977655 667789999999999999999999999988 889999999999


Q ss_pred             CCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCCCC
Q 048419          412 GSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANP  491 (653)
Q Consensus       412 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~  491 (653)
                      ++|.+++.....   ..++|...+.++.|++.||+|||+   ++++|+||||+||+++.++.+||+|||+++........
T Consensus        80 ~~L~~~l~~~~~---~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~  153 (257)
T cd05040          80 GSLLDRLRKDAL---GHFLISTLCDYAVQIANGMRYLES---KRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDH  153 (257)
T ss_pred             CcHHHHHHhccc---ccCcHHHHHHHHHHHHHHHHHHHh---CCccccccCcccEEEecCCEEEeccccccccccccccc
Confidence            999999977541   458999999999999999999999   89999999999999999999999999999876442211


Q ss_pred             --cccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhcc
Q 048419          492 --QTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTL  568 (653)
Q Consensus       492 --~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l  568 (653)
                        ......++..|+|||++.+..++.++|||||||++|||++ |+.|+......+.   ...+..   ..       ..+
T Consensus       154 ~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~---~~~~~~---~~-------~~~  220 (257)
T cd05040         154 YVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQI---LKKIDK---EG-------ERL  220 (257)
T ss_pred             eecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHH---HHHHHh---cC-------CcC
Confidence              1122456789999999998899999999999999999999 9999865433221   111111   00       000


Q ss_pred             CcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          569 DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       569 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                       ......+..+.+++.+||+.+|.+||++.++++.|.
T Consensus       221 -~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~  256 (257)
T cd05040         221 -ERPEACPQDIYNVMLQCWAHNPADRPTFAALREFLP  256 (257)
T ss_pred             -CCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence             011123467889999999999999999999999885

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=100.00  E-value=2.3e-36  Score=314.09  Aligned_cols=253  Identities=25%  Similarity=0.357  Sum_probs=207.3

Q ss_pred             hcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEec
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDY  408 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~  408 (653)
                      .++|...+.||+|++|.||++....+++.||+|.+........+.+.+|+.+++.++|+|++++++++...+..++||||
T Consensus        18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~   97 (297)
T cd06656          18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY   97 (297)
T ss_pred             hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeecc
Confidence            36788899999999999999999888999999999766555567788999999999999999999999999999999999


Q ss_pred             cCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCC
Q 048419          409 VPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHG  488 (653)
Q Consensus       409 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~  488 (653)
                      +++++|.+++...      .+++.++..++.|++.||.|||+   .+++|+||||+|||++.++.+||+|||++......
T Consensus        98 ~~~~~L~~~~~~~------~~~~~~~~~~~~~l~~~L~~LH~---~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~  168 (297)
T cd06656          98 LAGGSLTDVVTET------CMDEGQIAAVCRECLQALDFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE  168 (297)
T ss_pred             cCCCCHHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEECcCccceEccCC
Confidence            9999999998543      37888999999999999999999   89999999999999999999999999998765433


Q ss_pred             CCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhcc
Q 048419          489 ANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTL  568 (653)
Q Consensus       489 ~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l  568 (653)
                      .. ......+++.|+|||.+.+..++.++|||||||++|+|++|+.||.......... .  .   ...+      .+.+
T Consensus       169 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~-~--~---~~~~------~~~~  235 (297)
T cd06656         169 QS-KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY-L--I---ATNG------TPEL  235 (297)
T ss_pred             cc-CcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchhee-e--e---ccCC------CCCC
Confidence            21 2233468889999999998889999999999999999999999997543321100 0  0   0000      0000


Q ss_pred             CcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          569 DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       569 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                       .........+.+++.+||+.+|.+||++.+++++-
T Consensus       236 -~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~  270 (297)
T cd06656         236 -QNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQHP  270 (297)
T ss_pred             -CCccccCHHHHHHHHHHccCChhhCcCHHHHhcCc
Confidence             01112345678999999999999999999999854

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=100.00  E-value=1.8e-36  Score=323.16  Aligned_cols=264  Identities=23%  Similarity=0.280  Sum_probs=201.9

Q ss_pred             HhhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC--chhhHHHHHHHHHHHhhcCCCceeeeeeeeccc-----
Q 048419          327 SVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQ-----  399 (653)
Q Consensus       327 ~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~-----  399 (653)
                      ...++|...+.||+|+||.||++.+...++.||||++...  .....+.+.+|+.+++.++|+||+++++++...     
T Consensus        14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~   93 (355)
T cd07874          14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEE   93 (355)
T ss_pred             hhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccc
Confidence            3557899999999999999999999888999999998653  333456788999999999999999999987543     


Q ss_pred             -ceeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEe
Q 048419          400 -DELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGD  478 (653)
Q Consensus       400 -~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D  478 (653)
                       ...++||||+++ +|.+.+..       .+++..+..++.|++.||.|||+   ++|+||||||+|||++.++.+||+|
T Consensus        94 ~~~~~lv~e~~~~-~l~~~~~~-------~l~~~~~~~~~~qi~~aL~~LH~---~givHrDikp~Nill~~~~~~kl~D  162 (355)
T cd07874          94 FQDVYLVMELMDA-NLCQVIQM-------ELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILD  162 (355)
T ss_pred             cceeEEEhhhhcc-cHHHHHhh-------cCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChHHEEECCCCCEEEee
Confidence             357999999965 66666532       37888899999999999999999   9999999999999999999999999


Q ss_pred             ecCcccccCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhh---
Q 048419          479 FGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELH---  555 (653)
Q Consensus       479 fGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~---  555 (653)
                      ||+++.....  .......||..|+|||++.+..++.++|||||||++|||++|+.||..........  ..+....   
T Consensus       163 fg~~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~--~~~~~~~~~~  238 (355)
T cd07874         163 FGLARTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWN--KVIEQLGTPC  238 (355)
T ss_pred             CcccccCCCc--cccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH--HHHHHhCCCC
Confidence            9999865332  12233578999999999998889999999999999999999999997654322110  0000000   


Q ss_pred             ------cccchhHhhh---------------hcc----CcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          556 ------LEGEITQAID---------------QTL----DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       556 ------~~~~~~~~~d---------------~~l----~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                            ........++               ..+    ..........+.+++.+||+.||.+|||+.|++++-.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp~  313 (355)
T cd07874         239 PEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPY  313 (355)
T ss_pred             HHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCcc
Confidence                  0000000000               000    0001112356889999999999999999999999753

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=100.00  E-value=2.2e-36  Score=315.21  Aligned_cols=260  Identities=24%  Similarity=0.367  Sum_probs=205.0

Q ss_pred             hcCcCcceeeeeeCcEEEEEEEeC-------CCCcEEEEEEeccC-chhhHHHHHHHHHHHhhc-CCCceeeeeeeeccc
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGLMP-------SLGLEVAIKRIGHN-SQQGMKEFVAEIMSMGRL-RHRNLVQLHGWCRKQ  399 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~~~-------~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~  399 (653)
                      .++|...+.||+|+||.||+|+..       ..+..||+|.+... .....+.+.+|+..++.+ +|+||+++++++...
T Consensus        14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~   93 (304)
T cd05101          14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD   93 (304)
T ss_pred             HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecC
Confidence            356778899999999999999752       23457999998644 344567889999999999 899999999999999


Q ss_pred             ceeEEEEeccCCCCchhhhhccccc-----------ccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEE
Q 048419          400 DELLLVYDYVPNGSLDKLLFDKDHK-----------LRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILL  468 (653)
Q Consensus       400 ~~~~lV~E~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll  468 (653)
                      ...++||||+++|+|.+++......           ....+++.+++.++.||+.||.|||+   ++++||||||+||++
T Consensus        94 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~---~givH~dlkp~Nili  170 (304)
T cd05101          94 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLAS---QKCIHRDLAARNVLV  170 (304)
T ss_pred             CceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHH---CCeeecccccceEEE
Confidence            9999999999999999999764321           12357889999999999999999999   899999999999999


Q ss_pred             cCCCcEEEEeecCcccccCCCCC-cccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHH
Q 048419          469 DTYLNAKLGDFGLAKIYEHGANP-QTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELL  546 (653)
Q Consensus       469 ~~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~  546 (653)
                      +.++.+||+|||+++........ ......++..|+|||.+.+..++.++||||||+++|||++ |..|+.......   
T Consensus       171 ~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~---  247 (304)
T cd05101         171 TENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE---  247 (304)
T ss_pred             cCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHH---
Confidence            99999999999999866432221 1222345678999999988889999999999999999998 777876433211   


Q ss_pred             HHHHHHhhhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          547 LVDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       547 l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                      +.+.+..    +..       . .........+.+++.+||+.+|.+||++.|+++.|..
T Consensus       248 ~~~~~~~----~~~-------~-~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~  295 (304)
T cd05101         248 LFKLLKE----GHR-------M-DKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDR  295 (304)
T ss_pred             HHHHHHc----CCc-------C-CCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHH
Confidence            1111111    100       0 0112234678899999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=100.00  E-value=1.3e-36  Score=322.54  Aligned_cols=264  Identities=21%  Similarity=0.288  Sum_probs=200.9

Q ss_pred             HHhhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc--hhhHHHHHHHHHHHhhcCCCceeeeeeeeccc----
Q 048419          326 ASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS--QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQ----  399 (653)
Q Consensus       326 ~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~----  399 (653)
                      ..+.++|...+.||+|+||.||+|....++..||||++....  ....+.+.+|+.++++++|+||+++++++...    
T Consensus        11 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   90 (343)
T cd07878          11 WEVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIE   90 (343)
T ss_pred             hhhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhccccccc
Confidence            345678899999999999999999998889999999986532  23345678899999999999999999987543    


Q ss_pred             --ceeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEE
Q 048419          400 --DELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLG  477 (653)
Q Consensus       400 --~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~  477 (653)
                        ...++++|++ +++|.+++..      ..+++..+..++.||+.||.|||+   ++|+||||||+|||+++++.+||+
T Consensus        91 ~~~~~~~~~~~~-~~~l~~~~~~------~~l~~~~~~~i~~qi~~aL~~LH~---~~ivHrdikp~Nil~~~~~~~kl~  160 (343)
T cd07878          91 NFNEVYLVTNLM-GADLNNIVKC------QKLSDEHVQFLIYQLLRGLKYIHS---AGIIHRDLKPSNVAVNEDCELRIL  160 (343)
T ss_pred             ccCcEEEEeecC-CCCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeecccCChhhEEECCCCCEEEc
Confidence              3578999998 7799887753      238899999999999999999999   999999999999999999999999


Q ss_pred             eecCcccccCCCCCcccccccCCcccCcccccc-CCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhc
Q 048419          478 DFGLAKIYEHGANPQTTHIVGTLGYLAPELTRT-GKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHL  556 (653)
Q Consensus       478 DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~  556 (653)
                      |||+++.....    .....||..|+|||++.+ ..++.++|||||||++|||++|+.||.........  ..+......
T Consensus       161 Dfg~~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~--~~~~~~~~~  234 (343)
T cd07878         161 DFGLARQADDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQL--KRIMEVVGT  234 (343)
T ss_pred             CCccceecCCC----cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHH--HHHHHHhCC
Confidence            99999865432    233468999999999876 46889999999999999999999999754332211  111100000


Q ss_pred             -ccchh--------HhhhhccCcCCH--------HHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          557 -EGEIT--------QAIDQTLDYYDL--------AEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       557 -~~~~~--------~~~d~~l~~~~~--------~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                       .....        ......+.....        .....+.+++.+||+.||.+|||+.|++++-.
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~  300 (343)
T cd07878         235 PSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPY  300 (343)
T ss_pred             CCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcc
Confidence             00000        000000100000        11245789999999999999999999998653

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=100.00  E-value=2.6e-36  Score=307.88  Aligned_cols=241  Identities=24%  Similarity=0.374  Sum_probs=191.1

Q ss_pred             eeeeeeCcEEEEEEEeCCC------------CcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeE
Q 048419          336 NLVGSGGFGRVYRGLMPSL------------GLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELL  403 (653)
Q Consensus       336 ~~LG~G~fg~Vy~~~~~~~------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~  403 (653)
                      +.||+|+||.||+|+....            ...|++|.+..........+.+|+.++++++||||+++++++......+
T Consensus         1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~   80 (262)
T cd05077           1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI   80 (262)
T ss_pred             CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence            3689999999999986422            3368999987665556678889999999999999999999999999999


Q ss_pred             EEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCc-------EEE
Q 048419          404 LVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLN-------AKL  476 (653)
Q Consensus       404 lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~-------~kl  476 (653)
                      +||||+++++|..++....    ..+++..+++++.||++||+|||+   ++|+||||||+|||++.++.       +|+
T Consensus        81 lv~e~~~~~~l~~~~~~~~----~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~Nill~~~~~~~~~~~~~~l  153 (262)
T cd05077          81 MVEEFVEFGPLDLFMHRKS----DVLTTPWKFKVAKQLASALSYLED---KDLVHGNVCTKNILLAREGIDGECGPFIKL  153 (262)
T ss_pred             EEEecccCCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHhhh---CCeECCCCCcccEEEecCCccCCCCceeEe
Confidence            9999999999998886542    348899999999999999999999   99999999999999987664       899


Q ss_pred             EeecCcccccCCCCCcccccccCCcccCccccc-cCCCCCccceeehHHHHHHHH-hCCCCCChhhhhhHHHHHHHHHhh
Q 048419          477 GDFGLAKIYEHGANPQTTHIVGTLGYLAPELTR-TGKATTSTDVYSYGILMLEVA-CGRRSIEPQKAAAELLLVDWVKEL  554 (653)
Q Consensus       477 ~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~ksDV~s~Gvvl~ell-tG~~p~~~~~~~~~~~l~~~~~~~  554 (653)
                      +|||++......     ....++..|+|||.+. +..++.++|||||||++|||+ +|+.|+......+...    ..  
T Consensus       154 ~d~g~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~----~~--  222 (262)
T cd05077         154 SDPGIPITVLSR-----QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKER----FY--  222 (262)
T ss_pred             CCCCCCccccCc-----ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHHH----HH--
Confidence            999998754321     2235788899999886 456889999999999999998 5778776433211100    00  


Q ss_pred             hcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          555 HLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       555 ~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                        ....      ..   .......+.+|+.+||+.||.+||++.+|++.++
T Consensus       223 --~~~~------~~---~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~~  262 (262)
T cd05077         223 --EGQC------ML---VTPSCKELADLMTHCMNYDPNQRPFFRAIMRDIN  262 (262)
T ss_pred             --hcCc------cC---CCCChHHHHHHHHHHcCCChhhCcCHHHHHHhcC
Confidence              0000      00   0112356889999999999999999999998874

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=100.00  E-value=2e-36  Score=344.37  Aligned_cols=260  Identities=24%  Similarity=0.321  Sum_probs=203.4

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC---chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN---SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVY  406 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  406 (653)
                      ++|+..++||+|+||.||+|.+..+++.||||++...   .....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus         2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM   81 (932)
T PRK13184          2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM   81 (932)
T ss_pred             CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence            4788899999999999999999988999999998653   2233567899999999999999999999999999999999


Q ss_pred             eccCCCCchhhhhcccc------cccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeec
Q 048419          407 DYVPNGSLDKLLFDKDH------KLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFG  480 (653)
Q Consensus       407 E~~~~gsL~~~l~~~~~------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG  480 (653)
                      ||+++|+|.+++.....      .....+++..+++++.||++||+|||+   ++|+||||||+||+++.++.+||+|||
T Consensus        82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs---~GIIHRDLKPeNILLd~dg~vKLiDFG  158 (932)
T PRK13184         82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHS---KGVLHRDLKPDNILLGLFGEVVILDWG  158 (932)
T ss_pred             EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHH---CCccccCCchheEEEcCCCCEEEEecC
Confidence            99999999999865311      112346678889999999999999999   899999999999999999999999999


Q ss_pred             CcccccCCCC-----------------CcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhh
Q 048419          481 LAKIYEHGAN-----------------PQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAA  543 (653)
Q Consensus       481 la~~~~~~~~-----------------~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~  543 (653)
                      +++.......                 .......||+.|+|||.+.+..++.++|||||||++|||+||+.||.......
T Consensus       159 LAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~k  238 (932)
T PRK13184        159 AAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRK  238 (932)
T ss_pred             cceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhh
Confidence            9986521100                 01122468999999999999999999999999999999999999997633211


Q ss_pred             HHHHHHHHHhhhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCC-CHHHHHHHHc
Q 048419          544 ELLLVDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRP-DMRRVVEFLL  605 (653)
Q Consensus       544 ~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RP-s~~evl~~L~  605 (653)
                      . ..     .    ..+.   ++.-.......+..+.+++.+|++.||.+|| ++.++++.|+
T Consensus       239 i-~~-----~----~~i~---~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le  288 (932)
T PRK13184        239 I-SY-----R----DVIL---SPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLE  288 (932)
T ss_pred             h-hh-----h----hhcc---ChhhccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence            1 00     0    0000   0000000012345688999999999999996 5566666554

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=100.00  E-value=2.7e-36  Score=308.95  Aligned_cols=251  Identities=28%  Similarity=0.430  Sum_probs=197.3

Q ss_pred             eeeeeeCcEEEEEEEeCCCCc--EEEEEEeccC-chhhHHHHHHHHHHHhhc-CCCceeeeeeeecccceeEEEEeccCC
Q 048419          336 NLVGSGGFGRVYRGLMPSLGL--EVAIKRIGHN-SQQGMKEFVAEIMSMGRL-RHRNLVQLHGWCRKQDELLLVYDYVPN  411 (653)
Q Consensus       336 ~~LG~G~fg~Vy~~~~~~~~~--~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~E~~~~  411 (653)
                      ++||+|+||.||+|.+.+++.  .+++|.+... .....+.+.+|+++++++ +||||++++++|...+..++||||+++
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~   80 (270)
T cd05047           1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH   80 (270)
T ss_pred             CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence            368999999999999877665  4688888643 345567889999999999 799999999999999999999999999


Q ss_pred             CCchhhhhccccc-----------ccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeec
Q 048419          412 GSLDKLLFDKDHK-----------LRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFG  480 (653)
Q Consensus       412 gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG  480 (653)
                      |+|.+++......           ....+++.+++.++.|++.||+|||+   ++++|+||||+||++++++.+||+|||
T Consensus        81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~---~~i~H~dikp~nili~~~~~~kl~dfg  157 (270)
T cd05047          81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFG  157 (270)
T ss_pred             CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccccceEEEcCCCeEEECCCC
Confidence            9999998754210           12347899999999999999999999   899999999999999999999999999


Q ss_pred             CcccccCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhhcccc
Q 048419          481 LAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELHLEGE  559 (653)
Q Consensus       481 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~  559 (653)
                      ++......  ........+..|+|||++....++.++|||||||++|||++ |+.||.......   ..+.+..    +.
T Consensus       158 l~~~~~~~--~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~---~~~~~~~----~~  228 (270)
T cd05047         158 LSRGQEVY--VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE---LYEKLPQ----GY  228 (270)
T ss_pred             Cccccchh--hhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHH---HHHHHhC----CC
Confidence            98632211  11111233567999999988889999999999999999997 999996543221   1111110    00


Q ss_pred             hhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          560 ITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       560 ~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                             .+ .........+.+++.+||+.+|.+||++.++++.|+.
T Consensus       229 -------~~-~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~  267 (270)
T cd05047         229 -------RL-EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNR  267 (270)
T ss_pred             -------CC-CCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHH
Confidence                   00 0111223568899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=100.00  E-value=4.6e-36  Score=305.38  Aligned_cols=253  Identities=24%  Similarity=0.404  Sum_probs=203.2

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEecc
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYV  409 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~  409 (653)
                      ++|...+.||+|+||.||++.... +..+|+|.+... ....+.+.+|++++++++|+|++++.+.+.+ ...+++|||+
T Consensus         6 ~~~~~~~~lg~g~~~~vy~~~~~~-~~~~~iK~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~~   82 (260)
T cd05073           6 ESLKLEKKLGAGQFGEVWMATYNK-HTKVAVKTMKPG-SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFM   82 (260)
T ss_pred             cceeEEeEecCccceEEEEEEecC-CccEEEEecCCC-hhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEeC
Confidence            567889999999999999998754 567999988643 2345678899999999999999999999887 7789999999


Q ss_pred             CCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCC
Q 048419          410 PNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGA  489 (653)
Q Consensus       410 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~  489 (653)
                      ++++|.+++....   ...+++.+++.++.|++.||.|||+   .+++|+||||+||+++.++.+||+|||++.......
T Consensus        83 ~~~~L~~~~~~~~---~~~~~~~~~~~~~~~l~~aL~~lH~---~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~  156 (260)
T cd05073          83 AKGSLLDFLKSDE---GSKQPLPKLIDFSAQIAEGMAFIEQ---RNYIHRDLRAANILVSASLVCKIADFGLARVIEDNE  156 (260)
T ss_pred             CCCcHHHHHHhCC---ccccCHHHHHHHHHHHHHHHHHHHh---CCccccccCcceEEEcCCCcEEECCCcceeeccCCC
Confidence            9999999997643   3457889999999999999999999   899999999999999999999999999998654332


Q ss_pred             CCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhcc
Q 048419          490 NPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTL  568 (653)
Q Consensus       490 ~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l  568 (653)
                      ........++..|+|||.+....++.++|+|||||++||+++ |+.||.......   +..+...    +...       
T Consensus       157 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~---~~~~~~~----~~~~-------  222 (260)
T cd05073         157 YTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE---VIRALER----GYRM-------  222 (260)
T ss_pred             cccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHH---HHHHHhC----CCCC-------
Confidence            222223345678999999988889999999999999999999 888987543221   1111111    1000       


Q ss_pred             CcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          569 DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       569 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                       .........+.+++.+|++.+|++||++.++.+.|+.
T Consensus       223 -~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~  259 (260)
T cd05073         223 -PRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD  259 (260)
T ss_pred             -CCcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence             0011234568899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=100.00  E-value=1.9e-36  Score=315.31  Aligned_cols=267  Identities=21%  Similarity=0.279  Sum_probs=203.1

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc-hhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEec
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS-QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDY  408 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~  408 (653)
                      ++|...+.||+|+||.||+|....++..||+|.+.... ......+.+|+..+++++|+||+++++++...+..++||||
T Consensus         6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~   85 (301)
T cd07873           6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY   85 (301)
T ss_pred             cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEec
Confidence            46888999999999999999998889999999986442 23345677899999999999999999999999999999999


Q ss_pred             cCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCC
Q 048419          409 VPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHG  488 (653)
Q Consensus       409 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~  488 (653)
                      ++ ++|.+++....    ..+++..+..++.||++||.|||+   ++++|+||||+||++++++.+||+|||++......
T Consensus        86 ~~-~~l~~~l~~~~----~~~~~~~~~~~~~qi~~aL~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~  157 (301)
T cd07873          86 LD-KDLKQYLDDCG----NSINMHNVKLFLFQLLRGLNYCHR---RKVLHRDLKPQNLLINERGELKLADFGLARAKSIP  157 (301)
T ss_pred             cc-cCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCHHHEEECCCCcEEECcCcchhccCCC
Confidence            97 58988886542    347889999999999999999999   99999999999999999999999999999764332


Q ss_pred             CCCcccccccCCcccCccccccC-CCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhh-
Q 048419          489 ANPQTTHIVGTLGYLAPELTRTG-KATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQ-  566 (653)
Q Consensus       489 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~-  566 (653)
                      .. ......+++.|+|||.+.+. .++.++|||||||++|||++|+.||...+.......................+.. 
T Consensus       158 ~~-~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (301)
T cd07873         158 TK-TYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNE  236 (301)
T ss_pred             CC-cccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccc
Confidence            21 12233568899999988653 5788999999999999999999999765443221111100000000001111000 


Q ss_pred             -----ccCc--------CCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          567 -----TLDY--------YDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       567 -----~l~~--------~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                           ....        ........+.+|+.+||+.||.+|||+.|++++-.
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~  288 (301)
T cd07873         237 EFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPY  288 (301)
T ss_pred             cccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCcc
Confidence                 0000        00112356789999999999999999999998553

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=3.2e-36  Score=310.97  Aligned_cols=255  Identities=25%  Similarity=0.393  Sum_probs=204.1

Q ss_pred             CcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC-chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEecc
Q 048419          331 GFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN-SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYV  409 (653)
Q Consensus       331 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~  409 (653)
                      +|+..+.||+|+||.||++....++..||+|.+... .......+.+|+.++++++|+||+++++.+...+..++||||+
T Consensus         2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~   81 (286)
T cd06622           2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYM   81 (286)
T ss_pred             hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeec
Confidence            567788999999999999999888999999998654 3344578899999999999999999999999999999999999


Q ss_pred             CCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCC
Q 048419          410 PNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGA  489 (653)
Q Consensus       410 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~  489 (653)
                      ++++|..++.....  ...+++..+..++.|++.||.|||+.  .+++|+||||+||+++.++.+||+|||++...... 
T Consensus        82 ~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~LH~~--~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~-  156 (286)
T cd06622          82 DAGSLDKLYAGGVA--TEGIPEDVLRRITYAVVKGLKFLKEE--HNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVAS-  156 (286)
T ss_pred             CCCCHHHHHHhccc--cCCCCHHHHHHHHHHHHHHHHHHHhc--CCEeeCCCCHHHEEECCCCCEEEeecCCcccccCC-
Confidence            99999998865321  23589999999999999999999972  58999999999999999999999999998765322 


Q ss_pred             CCcccccccCCcccCccccccCC------CCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHh
Q 048419          490 NPQTTHIVGTLGYLAPELTRTGK------ATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQA  563 (653)
Q Consensus       490 ~~~~~~~~gt~~y~aPE~~~~~~------~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~  563 (653)
                        ......++..|+|||.+.+..      ++.++|||||||++|||++|+.||.........   ..+         ...
T Consensus       157 --~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~---~~~---------~~~  222 (286)
T cd06622         157 --LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIF---AQL---------SAI  222 (286)
T ss_pred             --ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHH---HHH---------HHH
Confidence              122345788999999986543      478999999999999999999999754322111   000         011


Q ss_pred             hhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          564 IDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       564 ~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                      .+......+......+.+++.+||+.+|.+||++.+++++-
T Consensus       223 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~  263 (286)
T cd06622         223 VDGDPPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHP  263 (286)
T ss_pred             hhcCCCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcCh
Confidence            11111112223456788999999999999999999999854

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=100.00  E-value=2.1e-36  Score=322.23  Aligned_cols=263  Identities=22%  Similarity=0.282  Sum_probs=206.7

Q ss_pred             CcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcC-C-----CceeeeeeeecccceeEE
Q 048419          331 GFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLR-H-----RNLVQLHGWCRKQDELLL  404 (653)
Q Consensus       331 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H-----~niv~l~g~~~~~~~~~l  404 (653)
                      +|.+.++||+|.||.|-||.+.++++.||||+++.. +.-..+-..|+.+|..|+ |     -|+|++++++..++++||
T Consensus       187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~-k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlci  265 (586)
T KOG0667|consen  187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNK-KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCI  265 (586)
T ss_pred             EEEEEEEecccccceeEEEEecCCCcEEEEEeeccC-hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceee
Confidence            788899999999999999999999999999999544 444566778999999997 4     379999999999999999


Q ss_pred             EEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCC--CcEEEEeecCc
Q 048419          405 VYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTY--LNAKLGDFGLA  482 (653)
Q Consensus       405 V~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~--~~~kl~DfGla  482 (653)
                      |+|.+ .-+|+++|..+.   -..++...++.++.||+.||.+||+   .+|||+||||+||||.+.  ..+||+|||.+
T Consensus       266 VfELL-~~NLYellK~n~---f~Glsl~~ir~~~~Qil~~L~~L~~---l~IIHcDLKPENILL~~~~r~~vKVIDFGSS  338 (586)
T KOG0667|consen  266 VFELL-STNLYELLKNNK---FRGLSLPLVRKFAQQILTALLFLHE---LGIIHCDLKPENILLKDPKRSRIKVIDFGSS  338 (586)
T ss_pred             eehhh-hhhHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCChhheeeccCCcCceeEEecccc
Confidence            99999 459999998875   3558999999999999999999999   999999999999999543  46999999999


Q ss_pred             ccccCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHh---------
Q 048419          483 KIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKE---------  553 (653)
Q Consensus       483 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~---------  553 (653)
                      +......    ....-+..|+|||++.+..|+.+.|||||||++.||++|.+.|.+..+.+.....--+..         
T Consensus       339 c~~~q~v----ytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~  414 (586)
T KOG0667|consen  339 CFESQRV----YTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDT  414 (586)
T ss_pred             cccCCcc----eeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHh
Confidence            8754322    244567899999999999999999999999999999999887776665544322211100         


Q ss_pred             ------hhcc----------cch---------hHh----hhhcc--------C-cCCHHHHHHHHHHHHHcCCCCCCCCC
Q 048419          554 ------LHLE----------GEI---------TQA----IDQTL--------D-YYDLAEAELVLNLGLFCSAPNPVYRP  595 (653)
Q Consensus       554 ------~~~~----------~~~---------~~~----~d~~l--------~-~~~~~~~~~l~~l~~~Cl~~dP~~RP  595 (653)
                            ....          ...         ...    .+...        . .........+.+++.+|+..||.+|+
T Consensus       415 ~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~  494 (586)
T KOG0667|consen  415 AKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERI  494 (586)
T ss_pred             ccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcC
Confidence                  0000          000         000    00000        0 01112346789999999999999999


Q ss_pred             CHHHHHHHHc
Q 048419          596 DMRRVVEFLL  605 (653)
Q Consensus       596 s~~evl~~L~  605 (653)
                      |..|.+++-.
T Consensus       495 tp~qal~Hpf  504 (586)
T KOG0667|consen  495 TPAQALNHPF  504 (586)
T ss_pred             CHHHHhcCcc
Confidence            9999998664

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=100.00  E-value=9.6e-37  Score=304.58  Aligned_cols=267  Identities=25%  Similarity=0.313  Sum_probs=206.7

Q ss_pred             cCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchh--hHHHHHHHHHHHhhcCCCc-eeeeeeeecccc------ee
Q 048419          332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQ--GMKEFVAEIMSMGRLRHRN-LVQLHGWCRKQD------EL  402 (653)
Q Consensus       332 f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H~n-iv~l~g~~~~~~------~~  402 (653)
                      |...+.||+|.||+||+|+...+|+.||+|+++....+  .-....+|+.++++|+|+| |+++++++...+      .+
T Consensus        13 ~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~l   92 (323)
T KOG0594|consen   13 YEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGKL   92 (323)
T ss_pred             HHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccceE
Confidence            44566799999999999999999999999999765432  2345679999999999999 999999998877      78


Q ss_pred             EEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCc
Q 048419          403 LLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLA  482 (653)
Q Consensus       403 ~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla  482 (653)
                      ++|+||+. -+|..++....... ..++...+..+..||+.||+|||+   ++|+||||||.||||+++|.+||+|||+|
T Consensus        93 ~lvfe~~d-~DL~~ymd~~~~~~-~g~~~~~ik~~m~Qll~gl~~~H~---~~IlHRDLKPQNlLi~~~G~lKlaDFGlA  167 (323)
T KOG0594|consen   93 YLVFEFLD-RDLKKYMDSLPKKP-QGLPPRLIKSFMRQLLRGLAFLHS---HGILHRDLKPQNLLISSSGVLKLADFGLA  167 (323)
T ss_pred             EEEEEeec-ccHHHHHHhccccc-cCCCHHHHHHHHHHHHHHHHHHHh---CCeecccCCcceEEECCCCcEeeeccchH
Confidence            99999995 49999998765321 346668889999999999999999   99999999999999999999999999999


Q ss_pred             ccccCCCCCcccccccCCcccCccccccC-CCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchh
Q 048419          483 KIYEHGANPQTTHIVGTLGYLAPELTRTG-KATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEIT  561 (653)
Q Consensus       483 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~  561 (653)
                      +....... ..+..++|..|+|||++.+. .|+...||||+||++.||++++..|.+..+.++....-.+.....+...+
T Consensus       168 ra~~ip~~-~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp  246 (323)
T KOG0594|consen  168 RAFSIPMR-TYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWP  246 (323)
T ss_pred             HHhcCCcc-cccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCC
Confidence            96653322 23456789999999998876 68999999999999999999999888776644332221111111111111


Q ss_pred             Hh---hhhcc---CcC---CH-----HHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          562 QA---IDQTL---DYY---DL-----AEAELVLNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       562 ~~---~d~~l---~~~---~~-----~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                      ..   .+-..   ...   +.     .......+++.+|++.+|.+|.|++.++++-
T Consensus       247 ~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~  303 (323)
T KOG0594|consen  247 GVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHP  303 (323)
T ss_pred             CccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcCh
Confidence            11   11110   000   00     0114788999999999999999999999874

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=100.00  E-value=3.2e-36  Score=308.26  Aligned_cols=254  Identities=25%  Similarity=0.380  Sum_probs=202.8

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCC---CcEEEEEEeccCc-hhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSL---GLEVAIKRIGHNS-QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLV  405 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~---~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV  405 (653)
                      ++|...+.||+|+||.||+|.+...   ...|+||...... .+..+.+.+|+.++++++|+||++++++|.+ +..++|
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv   84 (270)
T cd05056           6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIV   84 (270)
T ss_pred             hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEE
Confidence            4577789999999999999987543   3469999986554 4556789999999999999999999999875 457899


Q ss_pred             EeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccc
Q 048419          406 YDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIY  485 (653)
Q Consensus       406 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~  485 (653)
                      |||+++++|.+++....    ..+++.+++.++.|++.||.|||+   .+++|+||||+||+++.++.+||+|||+++..
T Consensus        85 ~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~~l~~~l~~lH~---~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~  157 (270)
T cd05056          85 MELAPLGELRSYLQVNK----YSLDLASLILYSYQLSTALAYLES---KRFVHRDIAARNVLVSSPDCVKLGDFGLSRYL  157 (270)
T ss_pred             EEcCCCCcHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHHh---CCeeccccChheEEEecCCCeEEccCceeeec
Confidence            99999999999996542    348999999999999999999999   89999999999999999999999999999866


Q ss_pred             cCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhhcccchhHhh
Q 048419          486 EHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELHLEGEITQAI  564 (653)
Q Consensus       486 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  564 (653)
                      ............++..|+|||.+....++.++||||||++++||++ |..||......+.   ...+..    +..    
T Consensus       158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~---~~~~~~----~~~----  226 (270)
T cd05056         158 EDESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDV---IGRIEN----GER----  226 (270)
T ss_pred             ccccceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHH---HHHHHc----CCc----
Confidence            4432222222334568999999988889999999999999999986 9999976543221   111111    000    


Q ss_pred             hhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          565 DQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       565 d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                         + .........+.+++.+|+..+|.+||++.++++.|+.
T Consensus       227 ---~-~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~  264 (270)
T cd05056         227 ---L-PMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSD  264 (270)
T ss_pred             ---C-CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence               0 0111234578899999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=100.00  E-value=1.8e-36  Score=312.04  Aligned_cols=269  Identities=24%  Similarity=0.353  Sum_probs=205.1

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCC----CCcEEEEEEeccCchh-hHHHHHHHHHHHhhcCCCceeeeeeeecc--ccee
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPS----LGLEVAIKRIGHNSQQ-GMKEFVAEIMSMGRLRHRNLVQLHGWCRK--QDEL  402 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~g~~~~--~~~~  402 (653)
                      +.|...+.||+|+||.||++.+..    ++..+|||.+...... ..+.+.+|++.+++++|+||+++++++..  ....
T Consensus         4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~   83 (284)
T cd05038           4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSL   83 (284)
T ss_pred             hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCce
Confidence            346667899999999999998643    3789999999765443 56789999999999999999999999877  5578


Q ss_pred             EEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCc
Q 048419          403 LLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLA  482 (653)
Q Consensus       403 ~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla  482 (653)
                      +++|||+++++|.+++....    ..+++.+++.++.|++.||+|||+   .+++|+||||+||+++.++.+||+|||++
T Consensus        84 ~lv~e~~~~~~l~~~l~~~~----~~~~~~~~~~~~~~l~~aL~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~  156 (284)
T cd05038          84 RLIMEYLPSGSLRDYLQRHR----DQINLKRLLLFSSQICKGMDYLGS---QRYIHRDLAARNILVESEDLVKISDFGLA  156 (284)
T ss_pred             EEEEecCCCCCHHHHHHhCc----cccCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHhEEEcCCCCEEEcccccc
Confidence            99999999999999997653    248999999999999999999999   89999999999999999999999999999


Q ss_pred             ccccCCCCC--cccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccch
Q 048419          483 KIYEHGANP--QTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEI  560 (653)
Q Consensus       483 ~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~  560 (653)
                      .........  ......++..|+|||.+.+..++.++||||||++++||++|+.|+............. .........+
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~-~~~~~~~~~~  235 (284)
T cd05038         157 KVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGI-AQGQMIVTRL  235 (284)
T ss_pred             cccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhcccccc-ccccccHHHH
Confidence            876532211  1112244567999999988889999999999999999999999876432211000000 0000000011


Q ss_pred             hHhhhhcc-CcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          561 TQAIDQTL-DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       561 ~~~~d~~l-~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                      .+.+.... ..........+.+++.+||+.+|.+||++.||+++|+.
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~  282 (284)
T cd05038         236 LELLKEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDR  282 (284)
T ss_pred             HHHHHcCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhh
Confidence            11111111 01112234678999999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=100.00  E-value=2.3e-36  Score=315.59  Aligned_cols=259  Identities=23%  Similarity=0.356  Sum_probs=203.6

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCC-------CCcEEEEEEeccC-chhhHHHHHHHHHHHhhc-CCCceeeeeeeecccc
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPS-------LGLEVAIKRIGHN-SQQGMKEFVAEIMSMGRL-RHRNLVQLHGWCRKQD  400 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~-------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~  400 (653)
                      ++|...+.||+|+||.||++....       ....+|+|.+... ......++..|+.+++++ +|+||++++++|...+
T Consensus        18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~   97 (307)
T cd05098          18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG   97 (307)
T ss_pred             HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCC
Confidence            568889999999999999998643       2357999999754 234456788999999999 7999999999999999


Q ss_pred             eeEEEEeccCCCCchhhhhccccc-----------ccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEc
Q 048419          401 ELLLVYDYVPNGSLDKLLFDKDHK-----------LRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLD  469 (653)
Q Consensus       401 ~~~lV~E~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~  469 (653)
                      ..++||||+++|+|.+++......           ....+++.++++++.|++.||+|||+   ++++||||||+||+++
T Consensus        98 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~---~gi~H~dlkp~Nill~  174 (307)
T cd05098          98 PLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVLVT  174 (307)
T ss_pred             ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHH---CCcccccccHHheEEc
Confidence            999999999999999999764321           12358899999999999999999999   8999999999999999


Q ss_pred             CCCcEEEEeecCcccccCCCC-CcccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHH
Q 048419          470 TYLNAKLGDFGLAKIYEHGAN-PQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLL  547 (653)
Q Consensus       470 ~~~~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l  547 (653)
                      .++.+||+|||+++....... .......++..|+|||.+.+..++.++|||||||++|||++ |+.|+.......   +
T Consensus       175 ~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~---~  251 (307)
T cd05098         175 EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE---L  251 (307)
T ss_pred             CCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHH---H
Confidence            999999999999876533211 11112234568999999988889999999999999999998 888886433211   1


Q ss_pred             HHHHHhhhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          548 VDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       548 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                      .+.+..    +..        ...+......+.+++.+||+.+|.+||++.+|++.|+.
T Consensus       252 ~~~~~~----~~~--------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~  298 (307)
T cd05098         252 FKLLKE----GHR--------MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR  298 (307)
T ss_pred             HHHHHc----CCC--------CCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHH
Confidence            111111    100        01111234678899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=100.00  E-value=4.9e-36  Score=306.30  Aligned_cols=251  Identities=26%  Similarity=0.370  Sum_probs=197.6

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc-----hhhHHHHHHHHHHHhhcCCCceeeeeeeecc--ccee
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS-----QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRK--QDEL  402 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~--~~~~  402 (653)
                      .+|...+.||+|+||.||+|....++..|++|++....     .+..+.+.+|+.++++++|+||+++++++.+  .+..
T Consensus         2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (266)
T cd06651           2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL   81 (266)
T ss_pred             CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence            46888999999999999999998889999999985431     2345678899999999999999999998865  3568


Q ss_pred             EEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCc
Q 048419          403 LLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLA  482 (653)
Q Consensus       403 ~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla  482 (653)
                      ++++||+++++|.+++...     ..+++..++.++.|++.||.|||+   .+++|+||||+||+++.++.+||+|||++
T Consensus        82 ~l~~e~~~~~~L~~~l~~~-----~~l~~~~~~~~~~qi~~~l~~LH~---~~i~H~~l~p~nil~~~~~~~~l~dfg~~  153 (266)
T cd06651          82 TIFMEYMPGGSVKDQLKAY-----GALTESVTRKYTRQILEGMSYLHS---NMIVHRDIKGANILRDSAGNVKLGDFGAS  153 (266)
T ss_pred             EEEEeCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEECCCCCEEEccCCCc
Confidence            8999999999999998653     237889999999999999999999   89999999999999999999999999998


Q ss_pred             ccccCCCC--CcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccch
Q 048419          483 KIYEHGAN--PQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEI  560 (653)
Q Consensus       483 ~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~  560 (653)
                      +.......  .......++..|+|||++.+..++.++|||||||++|||++|+.||.........      ........ 
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~------~~~~~~~~-  226 (266)
T cd06651         154 KRLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAI------FKIATQPT-  226 (266)
T ss_pred             cccccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHHH------HHHhcCCC-
Confidence            76532111  1122345788999999999888999999999999999999999999754322111      00000000 


Q ss_pred             hHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 048419          561 TQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEF  603 (653)
Q Consensus       561 ~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  603 (653)
                          .+   ..+....+.+..++ .||..+|++||+++||+++
T Consensus       227 ----~~---~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~h  261 (266)
T cd06651         227 ----NP---QLPSHISEHARDFL-GCIFVEARHRPSAEELLRH  261 (266)
T ss_pred             ----CC---CCchhcCHHHHHHH-HHhcCChhhCcCHHHHhcC
Confidence                01   11112234455555 6888999999999999875

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=100.00  E-value=2.2e-36  Score=320.82  Aligned_cols=260  Identities=24%  Similarity=0.357  Sum_probs=200.2

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeC-----CCCcEEEEEEeccCc-hhhHHHHHHHHHHHhhc-CCCceeeeeeeeccc-ce
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMP-----SLGLEVAIKRIGHNS-QQGMKEFVAEIMSMGRL-RHRNLVQLHGWCRKQ-DE  401 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~-~~  401 (653)
                      ++|+..+.||+|+||.||+|.+.     .+++.||||+++... ......+.+|+.++.++ +|+||++++++|... ..
T Consensus         7 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~   86 (343)
T cd05103           7 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGP   86 (343)
T ss_pred             hHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCCc
Confidence            56888999999999999999842     357889999997543 33456788999999999 689999999988655 45


Q ss_pred             eEEEEeccCCCCchhhhhccccc---------------------------------------------------------
Q 048419          402 LLLVYDYVPNGSLDKLLFDKDHK---------------------------------------------------------  424 (653)
Q Consensus       402 ~~lV~E~~~~gsL~~~l~~~~~~---------------------------------------------------------  424 (653)
                      .++||||+++|+|.+++......                                                         
T Consensus        87 ~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (343)
T cd05103          87 LMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEA  166 (343)
T ss_pred             eEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhhh
Confidence            78999999999999998653210                                                         


Q ss_pred             -----ccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCCC-Cccccccc
Q 048419          425 -----LRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGAN-PQTTHIVG  498 (653)
Q Consensus       425 -----~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~-~~~~~~~g  498 (653)
                           ....+++.++.+++.||+.||+|||+   ++|+||||||+||+++.++.+||+|||++........ .......+
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~  243 (343)
T cd05103         167 EQEDLYKKVLTLEDLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARL  243 (343)
T ss_pred             hhhhhhhccCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCC
Confidence                 01347888999999999999999999   9999999999999999999999999999986532211 11122345


Q ss_pred             CCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhccCcCCHHHHH
Q 048419          499 TLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYYDLAEAE  577 (653)
Q Consensus       499 t~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~  577 (653)
                      +..|+|||.+.+..++.++||||||+++|||++ |..|+........  +...+    ..+....     .   +.....
T Consensus       244 ~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~--~~~~~----~~~~~~~-----~---~~~~~~  309 (343)
T cd05103         244 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE--FCRRL----KEGTRMR-----A---PDYTTP  309 (343)
T ss_pred             CcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHH--HHHHH----hccCCCC-----C---CCCCCH
Confidence            678999999988889999999999999999997 8888865332111  11111    0110000     0   001234


Q ss_pred             HHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          578 LVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       578 ~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                      .+.+++..||+.+|.+||++.||+++|+.
T Consensus       310 ~~~~~~~~cl~~~p~~Rps~~eil~~l~~  338 (343)
T cd05103         310 EMYQTMLDCWHGEPSQRPTFSELVEHLGN  338 (343)
T ss_pred             HHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence            68899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=100.00  E-value=4.2e-36  Score=304.91  Aligned_cols=248  Identities=30%  Similarity=0.386  Sum_probs=199.6

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeec-ccceeEEEEec
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR-KQDELLLVYDY  408 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~-~~~~~~lV~E~  408 (653)
                      ++|...+.||+|+||.||++...  +..+|+|.+....  ..+.+.+|+.++++++|+|++++++++. +.+..++++||
T Consensus         6 ~~~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~   81 (256)
T cd05082           6 KELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY   81 (256)
T ss_pred             HhCeeeeeecccCCCeEEEEEEc--CCcEEEEEeCCCc--hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEEC
Confidence            46778899999999999999875  6789999985432  3467889999999999999999999764 45678999999


Q ss_pred             cCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCC
Q 048419          409 VPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHG  488 (653)
Q Consensus       409 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~  488 (653)
                      +++++|.+++....   ...+++..+++++.|++.||+|||+   ++++||||||+||+++.++.+||+|||+++.....
T Consensus        82 ~~~~~L~~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~  155 (256)
T cd05082          82 MAKGSLVDYLRSRG---RSVLGGDCLLKFSLDVCEAMEYLEA---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST  155 (256)
T ss_pred             CCCCcHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHh---CCEeccccchheEEEcCCCcEEecCCccceecccc
Confidence            99999999987653   2458899999999999999999999   89999999999999999999999999998754322


Q ss_pred             CCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhc
Q 048419          489 ANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQT  567 (653)
Q Consensus       489 ~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~  567 (653)
                      .    ....++..|+|||++.+..++.++|||||||++|||++ |+.|+.......   +...+.....         . 
T Consensus       156 ~----~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~---~~~~~~~~~~---------~-  218 (256)
T cd05082         156 Q----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD---VVPRVEKGYK---------M-  218 (256)
T ss_pred             C----CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHH---HHHHHhcCCC---------C-
Confidence            1    22344568999999988889999999999999999998 898886543211   1111111100         0 


Q ss_pred             cCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          568 LDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       568 l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                        .........+.+++.+||+.+|++|||+.++++.|+.
T Consensus       219 --~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~  255 (256)
T cd05082         219 --DAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEH  255 (256)
T ss_pred             --CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhc
Confidence              0111234678899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=100.00  E-value=3.9e-36  Score=304.56  Aligned_cols=250  Identities=26%  Similarity=0.381  Sum_probs=204.8

Q ss_pred             CcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC--chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEec
Q 048419          331 GFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDY  408 (653)
Q Consensus       331 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~  408 (653)
                      +|+..+.||+|++|.||++....+++.+|||.+...  ..+..+.+.+|++++++++|+|++++++.+...+..++|+||
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08220           1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY   80 (256)
T ss_pred             CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence            477889999999999999999888999999998654  334567889999999999999999999999989999999999


Q ss_pred             cCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCC-CcEEEEeecCcccccC
Q 048419          409 VPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTY-LNAKLGDFGLAKIYEH  487 (653)
Q Consensus       409 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~-~~~kl~DfGla~~~~~  487 (653)
                      +++++|.+++....   ...+++..+.+++.|++++|.|||+   ++++|+||+|+||+++++ +.+||+|||++.....
T Consensus        81 ~~~~~L~~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lh~---~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~  154 (256)
T cd08220          81 APGGTLAEYIQKRC---NSLLDEDTILHFFVQILLALHHVHT---KLILHRDLKTQNILLDKHKMVVKIGDFGISKILSS  154 (256)
T ss_pred             CCCCCHHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEEccCCCceecCC
Confidence            99999999997643   3458899999999999999999999   899999999999999755 4689999999987644


Q ss_pred             CCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhc
Q 048419          488 GANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQT  567 (653)
Q Consensus       488 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~  567 (653)
                      ..  ......++..|+|||.+....++.++||||||+++++|++|+.|+.......   .......    +.        
T Consensus       155 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~---~~~~~~~----~~--------  217 (256)
T cd08220         155 KS--KAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPA---LVLKIMS----GT--------  217 (256)
T ss_pred             Cc--cccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHH---HHHHHHh----cC--------
Confidence            32  1223467889999999998889999999999999999999999997654321   1111110    00        


Q ss_pred             cCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 048419          568 LDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEF  603 (653)
Q Consensus       568 l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  603 (653)
                      ...........+.+++..||+.+|.+|||+.|++++
T Consensus       218 ~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~  253 (256)
T cd08220         218 FAPISDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQ  253 (256)
T ss_pred             CCCCCCCcCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence            001111234568899999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=100.00  E-value=3.1e-36  Score=310.01  Aligned_cols=260  Identities=21%  Similarity=0.330  Sum_probs=206.2

Q ss_pred             hcCcCcceeeeeeCcEEEEEEEeCC----CCcEEEEEEeccC-chhhHHHHHHHHHHHhhcCCCceeeeeeeecc-ccee
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGLMPS----LGLEVAIKRIGHN-SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRK-QDEL  402 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~~~~----~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~-~~~~  402 (653)
                      .++|...++||+|+||.||+|.+..    .+..|++|++... .....+.+.+|+..+++++|+|++++++++.. ....
T Consensus         5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~   84 (280)
T cd05043           5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPP   84 (280)
T ss_pred             hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCC
Confidence            4678889999999999999999865    3578999988644 34446778899999999999999999998876 4678


Q ss_pred             EEEEeccCCCCchhhhhccccc---ccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEee
Q 048419          403 LLVYDYVPNGSLDKLLFDKDHK---LRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDF  479 (653)
Q Consensus       403 ~lV~E~~~~gsL~~~l~~~~~~---~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df  479 (653)
                      ++++||+++++|.+++......   ....+++.+++.++.|++.||+|||+   ++++|+||||+||++++++.+||+||
T Consensus        85 ~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~---~~i~H~di~p~nil~~~~~~~kl~d~  161 (280)
T cd05043          85 FVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHK---RGVIHKDIAARNCVIDEELQVKITDN  161 (280)
T ss_pred             EEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccCHhhEEEcCCCcEEECCC
Confidence            9999999999999998764321   11458999999999999999999999   89999999999999999999999999


Q ss_pred             cCcccccCCCCCc-ccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhhcc
Q 048419          480 GLAKIYEHGANPQ-TTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELHLE  557 (653)
Q Consensus       480 Gla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~  557 (653)
                      |+++.+....... .....++..|+|||.+.+..++.++|||||||++||+++ |+.||.......   +..++....  
T Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~---~~~~~~~~~--  236 (280)
T cd05043         162 ALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFE---MAAYLKDGY--  236 (280)
T ss_pred             CCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHH---HHHHHHcCC--
Confidence            9998653322111 112345678999999988889999999999999999999 999997543321   222222110  


Q ss_pred             cchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          558 GEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       558 ~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                       .        + .........+.+++.+||+.+|++||++.++++.|+.
T Consensus       237 -~--------~-~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~  275 (280)
T cd05043         237 -R--------L-AQPINCPDELFAVMACCWALDPEERPSFSQLVQCLTD  275 (280)
T ss_pred             -C--------C-CCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHH
Confidence             0        0 0011224568899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=100.00  E-value=2.4e-36  Score=310.19  Aligned_cols=240  Identities=23%  Similarity=0.351  Sum_probs=189.5

Q ss_pred             eeeeeCcEEEEEEEeCC------------------------CCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeee
Q 048419          337 LVGSGGFGRVYRGLMPS------------------------LGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQL  392 (653)
Q Consensus       337 ~LG~G~fg~Vy~~~~~~------------------------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l  392 (653)
                      .||+|+||.||+|....                        ....|++|.+..........+.+|+.++++++|+||+++
T Consensus         2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~   81 (274)
T cd05076           2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV   81 (274)
T ss_pred             CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence            59999999999998532                        124689999876555556788899999999999999999


Q ss_pred             eeeecccceeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCC
Q 048419          393 HGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYL  472 (653)
Q Consensus       393 ~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~  472 (653)
                      +++|.+....++||||+++|+|..++...    ...+++..+..++.||++||+|||+   ++|+||||||+|||++..+
T Consensus        82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~----~~~~~~~~~~~i~~qi~~~l~~lH~---~~iiH~dlkp~Nill~~~~  154 (274)
T cd05076          82 HGVCVRGSENIMVEEFVEHGPLDVCLRKE----KGRVPVAWKITVAQQLASALSYLED---KNLVHGNVCAKNILLARLG  154 (274)
T ss_pred             EEEEEeCCceEEEEecCCCCcHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHc---CCccCCCCCcccEEEeccC
Confidence            99999999999999999999999988653    2357889999999999999999999   8999999999999997643


Q ss_pred             -------cEEEEeecCcccccCCCCCcccccccCCcccCcccccc-CCCCCccceeehHHHHHHHH-hCCCCCChhhhhh
Q 048419          473 -------NAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRT-GKATTSTDVYSYGILMLEVA-CGRRSIEPQKAAA  543 (653)
Q Consensus       473 -------~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDV~s~Gvvl~ell-tG~~p~~~~~~~~  543 (653)
                             .+|++|||++......     ....++..|+|||.+.+ ..++.++|||||||++|||+ +|+.|+.......
T Consensus       155 ~~~~~~~~~kl~d~g~~~~~~~~-----~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~  229 (274)
T cd05076         155 LAEGTSPFIKLSDPGVSFTALSR-----EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSE  229 (274)
T ss_pred             cccCccceeeecCCccccccccc-----cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHH
Confidence                   3899999987643221     12356788999998865 56889999999999999995 6888887543322


Q ss_pred             HHHHHHHHHhhhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          544 ELLLVDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       544 ~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                      ..   .+....   ..        +   +......+.+++.+||+.+|++||++.+|++.|.
T Consensus       230 ~~---~~~~~~---~~--------~---~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L~  274 (274)
T cd05076         230 KE---RFYEKK---HR--------L---PEPSCKELATLISQCLTYEPTQRPSFRTILRDLT  274 (274)
T ss_pred             HH---HHHHhc---cC--------C---CCCCChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence            11   111100   00        0   0011246889999999999999999999999873

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=100.00  E-value=4.6e-36  Score=304.11  Aligned_cols=251  Identities=28%  Similarity=0.471  Sum_probs=203.6

Q ss_pred             CcceeeeeeCcEEEEEEEeCCCC----cEEEEEEeccCchh-hHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEe
Q 048419          333 GEQNLVGSGGFGRVYRGLMPSLG----LEVAIKRIGHNSQQ-GMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYD  407 (653)
Q Consensus       333 ~~~~~LG~G~fg~Vy~~~~~~~~----~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E  407 (653)
                      ...+.||+|+||.||++.....+    ..||+|.+...... ..+.+..|+..+++++|+||+++++++.+.+..+++||
T Consensus         2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e   81 (258)
T smart00219        2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVME   81 (258)
T ss_pred             cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEe
Confidence            45788999999999999998765    88999999665433 56789999999999999999999999999999999999


Q ss_pred             ccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccC
Q 048419          408 YVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEH  487 (653)
Q Consensus       408 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~  487 (653)
                      |+++++|.+++.....   ..+++.+++.++.|++.||+|||+   .+++|+||||+||++++++.++|+|||++.....
T Consensus        82 ~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~ql~~~l~~lh~---~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~  155 (258)
T smart00219       82 YMEGGDLLDYLRKNRP---KELSLSDLLSFALQIARGMEYLES---KNFIHRDLAARNCLVGENLVVKISDFGLSRDLYD  155 (258)
T ss_pred             ccCCCCHHHHHHhhhh---ccCCHHHHHHHHHHHHHHHHHHhc---CCeeecccccceEEEccCCeEEEcccCCceeccc
Confidence            9999999999976432   228999999999999999999999   8999999999999999999999999999987654


Q ss_pred             CCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhh
Q 048419          488 GANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQ  566 (653)
Q Consensus       488 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  566 (653)
                      ..........++..|+|||.+.+..++.++||||+|++++||++ |+.|+.......   +.+.+...    ..      
T Consensus       156 ~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~---~~~~~~~~----~~------  222 (258)
T smart00219      156 DDYYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEE---VLEYLKKG----YR------  222 (258)
T ss_pred             ccccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHH---HHHHHhcC----CC------
Confidence            32222212346789999999988889999999999999999998 778876533211   11111111    00      


Q ss_pred             ccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          567 TLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       567 ~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                        ..........+.+++.+|++.+|.+|||+.|+++.|
T Consensus       223 --~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l  258 (258)
T smart00219      223 --LPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL  258 (258)
T ss_pred             --CCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence              001111356788999999999999999999999865

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2e-36  Score=311.48  Aligned_cols=255  Identities=24%  Similarity=0.364  Sum_probs=207.2

Q ss_pred             hcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEec
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDY  408 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~  408 (653)
                      .++|+..+.||+|++|.||++....++..+|+|.+........+.+..|++++++++|+|++++++++......++||||
T Consensus         4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   83 (280)
T cd06611           4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEF   83 (280)
T ss_pred             hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeec
Confidence            35678888999999999999999888999999999777666778899999999999999999999999999999999999


Q ss_pred             cCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCC
Q 048419          409 VPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHG  488 (653)
Q Consensus       409 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~  488 (653)
                      +++++|.+++....    ..+++.+++.++.|++.||.|||+   ++|+|+||||+||+++.++.++|+|||++......
T Consensus        84 ~~~~~L~~~~~~~~----~~l~~~~~~~~~~ql~~~l~~lh~---~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~  156 (280)
T cd06611          84 CDGGALDSIMLELE----RGLTEPQIRYVCRQMLEALNFLHS---HKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKST  156 (280)
T ss_pred             cCCCcHHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChhhEEECCCCCEEEccCccchhhccc
Confidence            99999999986642    358999999999999999999999   89999999999999999999999999998764332


Q ss_pred             CCCcccccccCCcccCccccc-----cCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHh
Q 048419          489 ANPQTTHIVGTLGYLAPELTR-----TGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQA  563 (653)
Q Consensus       489 ~~~~~~~~~gt~~y~aPE~~~-----~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~  563 (653)
                      . .......++..|+|||.+.     ...++.++||||||+++|||++|+.||........  +..+.     .+..   
T Consensus       157 ~-~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~--~~~~~-----~~~~---  225 (280)
T cd06611         157 L-QKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRV--LLKIL-----KSEP---  225 (280)
T ss_pred             c-cccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHH--HHHHh-----cCCC---
Confidence            2 1223346889999999874     34467899999999999999999999976543211  11110     0000   


Q ss_pred             hhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          564 IDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       564 ~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                        +.+ ..+......+.+++..||+.+|.+||++.+++++-
T Consensus       226 --~~~-~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~  263 (280)
T cd06611         226 --PTL-DQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKHP  263 (280)
T ss_pred             --CCc-CCcccCCHHHHHHHHHHhccChhhCcCHHHHhcCh
Confidence              001 00112235688999999999999999999998864

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=100.00  E-value=4.6e-36  Score=314.38  Aligned_cols=259  Identities=24%  Similarity=0.375  Sum_probs=203.3

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeC-------CCCcEEEEEEeccC-chhhHHHHHHHHHHHhhc-CCCceeeeeeeecccc
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMP-------SLGLEVAIKRIGHN-SQQGMKEFVAEIMSMGRL-RHRNLVQLHGWCRKQD  400 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~-------~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~  400 (653)
                      ++|...+.||+|+||.||++...       .....+|+|.+... .......+..|+.+++++ +|+||++++++|...+
T Consensus        12 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~   91 (314)
T cd05099          12 DRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEG   91 (314)
T ss_pred             HHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCC
Confidence            46778899999999999999753       23457999998654 334466788999999999 6999999999999999


Q ss_pred             eeEEEEeccCCCCchhhhhcccc-----------cccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEc
Q 048419          401 ELLLVYDYVPNGSLDKLLFDKDH-----------KLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLD  469 (653)
Q Consensus       401 ~~~lV~E~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~  469 (653)
                      ..+++|||+++|+|.+++.....           .....+++.++.+++.|++.||.|||+   ++++||||||+|||++
T Consensus        92 ~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~---~gi~H~dlkp~Nill~  168 (314)
T cd05099          92 PLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLES---RRCIHRDLAARNVLVT  168 (314)
T ss_pred             ceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHH---CCeeeccccceeEEEc
Confidence            99999999999999999976421           012458899999999999999999999   9999999999999999


Q ss_pred             CCCcEEEEeecCcccccCCCCC-cccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHH
Q 048419          470 TYLNAKLGDFGLAKIYEHGANP-QTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLL  547 (653)
Q Consensus       470 ~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l  547 (653)
                      .++.+||+|||+++........ ......++..|+|||.+.+..++.++|||||||++|||++ |..||.......   +
T Consensus       169 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~---~  245 (314)
T cd05099         169 EDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEE---L  245 (314)
T ss_pred             CCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHH---H
Confidence            9999999999999865432211 1112234467999999988889999999999999999999 888886543221   1


Q ss_pred             HHHHHhhhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          548 VDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       548 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                      .+....    +...        .........+.+++.+||+.+|.+||++.|+++.|..
T Consensus       246 ~~~~~~----~~~~--------~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~  292 (314)
T cd05099         246 FKLLRE----GHRM--------DKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDK  292 (314)
T ss_pred             HHHHHc----CCCC--------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHH
Confidence            111111    1100        1111234567899999999999999999999998865

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=100.00  E-value=1.6e-36  Score=346.52  Aligned_cols=261  Identities=22%  Similarity=0.292  Sum_probs=203.4

Q ss_pred             HHHhhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC--chhhHHHHHHHHHHHhhcCCCceeeeeeeecc--cc
Q 048419          325 LASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRK--QD  400 (653)
Q Consensus       325 l~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~--~~  400 (653)
                      .....++|.+.+.||+|+||.||++.+..++..+|+|.+...  .......+..|+.++++|+|||||++++++..  ..
T Consensus         8 ge~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~   87 (1021)
T PTZ00266          8 GESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQ   87 (1021)
T ss_pred             CccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCC
Confidence            344557899999999999999999999999999999998643  33445678999999999999999999998754  35


Q ss_pred             eeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcC----CCCeEecCCCCCcEEEcC------
Q 048419          401 ELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEEC----NQRVVHRDVKPSNILLDT------  470 (653)
Q Consensus       401 ~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~----~~~ivH~Dlkp~NIll~~------  470 (653)
                      .++|||||+++|+|.++|...... ...+++..++.|+.||+.||.|||+..    .++|+||||||+||||+.      
T Consensus        88 ~lyIVMEY~~gGSL~~lL~k~~~~-~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg  166 (1021)
T PTZ00266         88 KLYILMEFCDAGDLSRNIQKCYKM-FGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIG  166 (1021)
T ss_pred             EEEEEEeCCCCCcHHHHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccc
Confidence            689999999999999999754221 245899999999999999999999832    145999999999999964      


Q ss_pred             -----------CCcEEEEeecCcccccCCCCCcccccccCCcccCcccccc--CCCCCccceeehHHHHHHHHhCCCCCC
Q 048419          471 -----------YLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRT--GKATTSTDVYSYGILMLEVACGRRSIE  537 (653)
Q Consensus       471 -----------~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~ksDV~s~Gvvl~elltG~~p~~  537 (653)
                                 ...+||+|||++.......  ......||+.|+|||++.+  ..++.++|||||||+||||++|+.||.
T Consensus       167 ~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s--~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~  244 (1021)
T PTZ00266        167 KITAQANNLNGRPIAKIGDFGLSKNIGIES--MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFH  244 (1021)
T ss_pred             cccccccccCCCCceEEccCCccccccccc--cccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCC
Confidence                       3348999999998654322  2234578999999999854  458899999999999999999999997


Q ss_pred             hhhhhhHHHHHHHHHhhhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 048419          538 PQKAAAELLLVDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEF  603 (653)
Q Consensus       538 ~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  603 (653)
                      .......     .+.......        .+  ........+.+|+..||+.+|.+||++.|++++
T Consensus       245 ~~~~~~q-----li~~lk~~p--------~l--pi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h  295 (1021)
T PTZ00266        245 KANNFSQ-----LISELKRGP--------DL--PIKGKSKELNILIKNLLNLSAKERPSALQCLGY  295 (1021)
T ss_pred             cCCcHHH-----HHHHHhcCC--------CC--CcCCCCHHHHHHHHHHhcCChhHCcCHHHHhcc
Confidence            5433211     111111000        00  001124568899999999999999999999953

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=100.00  E-value=4e-36  Score=307.39  Aligned_cols=255  Identities=25%  Similarity=0.359  Sum_probs=191.8

Q ss_pred             eeeeeCcEEEEEEEeCC--CCcEEEEEEeccCc-hhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEeccCCCC
Q 048419          337 LVGSGGFGRVYRGLMPS--LGLEVAIKRIGHNS-QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGS  413 (653)
Q Consensus       337 ~LG~G~fg~Vy~~~~~~--~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gs  413 (653)
                      .||+|+||.||+|....  ....+++|.+.... ......+.+|+..++.++|+||++++++|......++||||+++|+
T Consensus         2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~   81 (269)
T cd05042           2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGD   81 (269)
T ss_pred             cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCc
Confidence            58999999999997533  34578999876443 3445678899999999999999999999999999999999999999


Q ss_pred             chhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCCCC-c
Q 048419          414 LDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANP-Q  492 (653)
Q Consensus       414 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~-~  492 (653)
                      |.+++...........++...+.++.||+.||+|||+   ++|+||||||+|||+++++.+||+|||++......... .
T Consensus        82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~  158 (269)
T cd05042          82 LKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQ---ADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYIT  158 (269)
T ss_pred             HHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHh---cCEecccccHhheEecCCCcEEEeccccccccccchheec
Confidence            9999977543223445678889999999999999999   89999999999999999999999999998754322111 1


Q ss_pred             ccccccCCcccCcccccc-------CCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhhcccchhHhh
Q 048419          493 TTHIVGTLGYLAPELTRT-------GKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELHLEGEITQAI  564 (653)
Q Consensus       493 ~~~~~gt~~y~aPE~~~~-------~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  564 (653)
                      .....++..|+|||++..       ..++.++|||||||++|||++ |+.||....+.+.  +...+..    . .....
T Consensus       159 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~--~~~~~~~----~-~~~~~  231 (269)
T cd05042         159 KDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQV--LKQVVRE----Q-DIKLP  231 (269)
T ss_pred             cCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHH--HHHHhhc----c-CccCC
Confidence            122345678999998743       356789999999999999999 7788865433221  1111111    0 00111


Q ss_pred             hhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          565 DQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       565 d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                      .+.   ........+.+++..|| .||++||++.+|++.|.
T Consensus       232 ~~~---~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~  268 (269)
T cd05042         232 KPQ---LDLKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT  268 (269)
T ss_pred             CCc---ccccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence            111   11223456677888898 59999999999999873

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=3.6e-36  Score=310.41  Aligned_cols=258  Identities=23%  Similarity=0.342  Sum_probs=207.2

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc-hhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEec
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS-QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDY  408 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~  408 (653)
                      ++|+..+.||+|+||+||++....+++.||+|++.... ....+.+.+|+++++.++|+||+++++++...+.+++||||
T Consensus         5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   84 (284)
T cd06620           5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEF   84 (284)
T ss_pred             HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEec
Confidence            45677889999999999999998889999999886543 34467889999999999999999999999999999999999


Q ss_pred             cCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCC
Q 048419          409 VPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHG  488 (653)
Q Consensus       409 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~  488 (653)
                      +++++|.+++...     +.+++.....++.+++.+|.|||+.  .+++|+||||+||+++.++.++|+|||++......
T Consensus        85 ~~~~~L~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~LH~~--~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~  157 (284)
T cd06620          85 MDCGSLDRIYKKG-----GPIPVEILGKIAVAVVEGLTYLYNV--HRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINS  157 (284)
T ss_pred             CCCCCHHHHHHhc-----cCCCHHHHHHHHHHHHHHHHHHHHh--cCeeccCCCHHHEEECCCCcEEEccCCcccchhhh
Confidence            9999999988653     3488999999999999999999972  58999999999999999999999999998754322


Q ss_pred             CCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhH-----HHHHHHHHhhhcccchhHh
Q 048419          489 ANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAE-----LLLVDWVKELHLEGEITQA  563 (653)
Q Consensus       489 ~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~-----~~l~~~~~~~~~~~~~~~~  563 (653)
                      .   .....|+..|+|||.+.+..++.++|||||||++|||++|+.||.......+     ..+.++.....        
T Consensus       158 ~---~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~--------  226 (284)
T cd06620         158 I---ADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIV--------  226 (284)
T ss_pred             c---cCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHh--------
Confidence            1   1234688999999999888899999999999999999999999985443211     11111111111        


Q ss_pred             hhhccCcC-CHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          564 IDQTLDYY-DLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       564 ~d~~l~~~-~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                       ....... .......+.+++.+||+.||.+||++.|++++...
T Consensus       227 -~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~  269 (284)
T cd06620         227 -QEPPPRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPF  269 (284)
T ss_pred             -hccCCCCCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCccc
Confidence             0101011 11234678899999999999999999999997644

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=100.00  E-value=4.3e-36  Score=304.59  Aligned_cols=252  Identities=25%  Similarity=0.430  Sum_probs=201.6

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEecc
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYV  409 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~  409 (653)
                      .+|+..+.||+|+||.||++.+.. +..+|+|.+..... ....+.+|++.+++++|+|++++++++......++|+||+
T Consensus         4 ~~~~~~~~ig~g~~g~v~~~~~~~-~~~~~~k~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~   81 (256)
T cd05112           4 SELTLVQEIGSGQFGLVWLGYWLE-KRKVAIKTIREGAM-SEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFM   81 (256)
T ss_pred             hHeEEEeeecCcccceEEEEEEeC-CCeEEEEECCCCCC-CHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcC
Confidence            356778899999999999998864 67899999864432 3457889999999999999999999999999999999999


Q ss_pred             CCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCC
Q 048419          410 PNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGA  489 (653)
Q Consensus       410 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~  489 (653)
                      ++++|.+++....    ..++++.++.++.|++.+|+|||+   .+++|+||||+||+++.++.+||+|||+++......
T Consensus        82 ~~~~L~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~lH~---~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~  154 (256)
T cd05112          82 EHGCLSDYLRAQR----GKFSQETLLGMCLDVCEGMAYLES---SNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQ  154 (256)
T ss_pred             CCCcHHHHHHhCc----cCCCHHHHHHHHHHHHHHHHHHHH---CCccccccccceEEEcCCCeEEECCCcceeecccCc
Confidence            9999999986543    347899999999999999999999   899999999999999999999999999988654322


Q ss_pred             CCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhcc
Q 048419          490 NPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTL  568 (653)
Q Consensus       490 ~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l  568 (653)
                      ........++.+|+|||.+.+..++.++||||||+++|||++ |+.||.......   +.+....    +  .....+. 
T Consensus       155 ~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~---~~~~~~~----~--~~~~~~~-  224 (256)
T cd05112         155 YTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSE---VVETINA----G--FRLYKPR-  224 (256)
T ss_pred             ccccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHH---HHHHHhC----C--CCCCCCC-
Confidence            211222335678999999988889999999999999999998 899987543221   1111110    0  0000111 


Q ss_pred             CcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          569 DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       569 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                           .....+.+|+.+||+.+|++||++.+++++|.
T Consensus       225 -----~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l~  256 (256)
T cd05112         225 -----LASQSVYELMQHCWKERPEDRPSFSLLLHQLA  256 (256)
T ss_pred             -----CCCHHHHHHHHHHcccChhhCCCHHHHHHhhC
Confidence                 12467899999999999999999999999873

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=100.00  E-value=6.5e-36  Score=307.36  Aligned_cols=250  Identities=24%  Similarity=0.367  Sum_probs=206.2

Q ss_pred             CcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc-hhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEecc
Q 048419          331 GFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS-QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYV  409 (653)
Q Consensus       331 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~  409 (653)
                      .|+..+.||+|+||.||+|.+..++..||+|.+.... ....+.+.+|+.++++++|+||+++++.+.+....++||||+
T Consensus         5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   84 (277)
T cd06640           5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYL   84 (277)
T ss_pred             hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecC
Confidence            4666788999999999999998889999999987543 445678899999999999999999999999999999999999


Q ss_pred             CCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCC
Q 048419          410 PNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGA  489 (653)
Q Consensus       410 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~  489 (653)
                      ++++|.+++...      .+++.+...++.|++.||.|||+   .+++|+||+|+||+++.++.++|+|||++.......
T Consensus        85 ~~~~L~~~i~~~------~l~~~~~~~~~~~l~~~l~~lh~---~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~  155 (277)
T cd06640          85 GGGSALDLLRAG------PFDEFQIATMLKEILKGLDYLHS---EKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ  155 (277)
T ss_pred             CCCcHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHh---CCccCcCCChhhEEEcCCCCEEEcccccceeccCCc
Confidence            999999988643      37888899999999999999999   899999999999999999999999999997654322


Q ss_pred             CCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhccC
Q 048419          490 NPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLD  569 (653)
Q Consensus       490 ~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~  569 (653)
                      . ......++..|+|||.+.+..++.++|+|||||++|||++|..|+...........   +    ....        ..
T Consensus       156 ~-~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~---~----~~~~--------~~  219 (277)
T cd06640         156 I-KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFL---I----PKNN--------PP  219 (277)
T ss_pred             c-ccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhh---h----hcCC--------CC
Confidence            1 22234578899999999888899999999999999999999999875443211100   0    0000        01


Q ss_pred             cCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          570 YYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       570 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                      .........+.+++.+||+.+|.+||++.+++++..
T Consensus       220 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~  255 (277)
T cd06640         220 TLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKHKF  255 (277)
T ss_pred             CCchhhhHHHHHHHHHHcccCcccCcCHHHHHhChH
Confidence            222345677889999999999999999999988643

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=100.00  E-value=3.9e-36  Score=309.65  Aligned_cols=263  Identities=26%  Similarity=0.376  Sum_probs=208.5

Q ss_pred             ccCHHHHHHhhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhc-CCCceeeeeeeec
Q 048419          319 RFKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRL-RHRNLVQLHGWCR  397 (653)
Q Consensus       319 ~f~~~el~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~  397 (653)
                      ..++.++....+.|+..+.||+|+||.||+|.+..+++.+|+|.+.... .....+..|+.+++++ +|+|++++++++.
T Consensus         5 ~~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~   83 (282)
T cd06636           5 DIDLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFI   83 (282)
T ss_pred             hhhhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehh
Confidence            3566777778889999999999999999999998889999999986543 3345688899999998 6999999999985


Q ss_pred             c------cceeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCC
Q 048419          398 K------QDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTY  471 (653)
Q Consensus       398 ~------~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~  471 (653)
                      .      .+..+++|||+++|+|.+++....   ...+++..++.++.||+.||.|||+   ++++|+||||+||+++.+
T Consensus        84 ~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~~qi~~al~~LH~---~~ivH~dl~~~nili~~~  157 (282)
T cd06636          84 KKSPPGHDDQLWLVMEFCGAGSVTDLVKNTK---GNALKEDWIAYICREILRGLAHLHA---HKVIHRDIKGQNVLLTEN  157 (282)
T ss_pred             cccccCCCCEEEEEEEeCCCCcHHHHHHHcc---CCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCC
Confidence            3      457899999999999999987643   2347888899999999999999999   899999999999999999


Q ss_pred             CcEEEEeecCcccccCCCCCcccccccCCcccCccccc-----cCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHH
Q 048419          472 LNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTR-----TGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELL  546 (653)
Q Consensus       472 ~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~  546 (653)
                      +.++|+|||++........ ......|+..|+|||.+.     ...++.++|||||||++|||++|+.||..........
T Consensus       158 ~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~  236 (282)
T cd06636         158 AEVKLVDFGVSAQLDRTVG-RRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALF  236 (282)
T ss_pred             CCEEEeeCcchhhhhcccc-CCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhh
Confidence            9999999999876532211 123346889999999875     3457889999999999999999999997543322111


Q ss_pred             HHHHHHhhhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 048419          547 LVDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEF  603 (653)
Q Consensus       547 l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  603 (653)
                      .            +.......+  ........+.+++.+||+.||.+||++.|++++
T Consensus       237 ~------------~~~~~~~~~--~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~  279 (282)
T cd06636         237 L------------IPRNPPPKL--KSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKH  279 (282)
T ss_pred             h------------HhhCCCCCC--cccccCHHHHHHHHHHhCCChhhCcCHHHHhcC
Confidence            0            000000101  111234678999999999999999999999864

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=100.00  E-value=3.9e-36  Score=310.30  Aligned_cols=266  Identities=25%  Similarity=0.341  Sum_probs=205.8

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC--chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEe
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYD  407 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E  407 (653)
                      ++|+..+.||+|+||.||+|.+..+++.||||++...  .....+.+.+|++++++++|+||+++++++...+..++|||
T Consensus         1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e   80 (288)
T cd07833           1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFE   80 (288)
T ss_pred             CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEe
Confidence            3688899999999999999999988999999998643  33345788999999999999999999999999999999999


Q ss_pred             ccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccC
Q 048419          408 YVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEH  487 (653)
Q Consensus       408 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~  487 (653)
                      |++++.|..++...     ..+++.+++.++.||+.||.|||+   ++++|+||+|+||++++++.+||+|||++.....
T Consensus        81 ~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~  152 (288)
T cd07833          81 YVERTLLELLEASP-----GGLPPDAVRSYIWQLLQAIAYCHS---HNIIHRDIKPENILVSESGVLKLCDFGFARALRA  152 (288)
T ss_pred             cCCCCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCCEEEEeeecccccCC
Confidence            99987776655432     347899999999999999999999   8999999999999999999999999999987654


Q ss_pred             CCCCcccccccCCcccCccccccC-CCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhc---------c
Q 048419          488 GANPQTTHIVGTLGYLAPELTRTG-KATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHL---------E  557 (653)
Q Consensus       488 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~---------~  557 (653)
                      ..........++..|+|||++.+. .++.++||||||+++|||++|+.||......+.............         .
T Consensus       153 ~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (288)
T cd07833         153 RPASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSN  232 (288)
T ss_pred             CccccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccC
Confidence            433233345678899999999887 789999999999999999999999875443222111111000000         0


Q ss_pred             cchh-----Hhhhhc-c-CcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 048419          558 GEIT-----QAIDQT-L-DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEF  603 (653)
Q Consensus       558 ~~~~-----~~~d~~-l-~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  603 (653)
                      ....     +..+.. . ..++......+.+++.+||+.+|++||++++++++
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  285 (288)
T cd07833         233 PRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQH  285 (288)
T ss_pred             ccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcC
Confidence            0000     000000 0 01111225779999999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=6.3e-36  Score=301.01  Aligned_cols=267  Identities=22%  Similarity=0.297  Sum_probs=217.7

Q ss_pred             cCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc---hhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEec
Q 048419          332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS---QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDY  408 (653)
Q Consensus       332 f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~  408 (653)
                      |+..+.||.|.-|+||++.+.+++..+|+|++.+..   +....+...|-++|+.++||.++.|++.++..+..||||||
T Consensus        79 f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~mey  158 (459)
T KOG0610|consen   79 FRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVMEY  158 (459)
T ss_pred             HHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEEec
Confidence            344678999999999999999999999999997653   33455677899999999999999999999999999999999


Q ss_pred             cCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCC
Q 048419          409 VPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHG  488 (653)
Q Consensus       409 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~  488 (653)
                      |+||+|..+++.+.   .+.+++..++-.+..|+-||+|||.   .|||.|||||+||||.++|++-|+||.|+......
T Consensus       159 CpGGdL~~LrqkQp---~~~fse~~aRFYaAEvl~ALEYLHm---lGivYRDLKPENILvredGHIMLsDFDLS~~~~~~  232 (459)
T KOG0610|consen  159 CPGGDLHSLRQKQP---GKRFSESAARFYAAEVLLALEYLHM---LGIVYRDLKPENILVREDGHIMLSDFDLSLRCPVS  232 (459)
T ss_pred             CCCccHHHHHhhCC---CCccchhhHHHHHHHHHHHHHHHHh---hceeeccCCcceeEEecCCcEEeeeccccccCCCC
Confidence            99999999998877   5779999999999999999999999   99999999999999999999999999987543110


Q ss_pred             ----------------------------------CC---------------------CcccccccCCcccCccccccCCC
Q 048419          489 ----------------------------------AN---------------------PQTTHIVGTLGYLAPELTRTGKA  513 (653)
Q Consensus       489 ----------------------------------~~---------------------~~~~~~~gt~~y~aPE~~~~~~~  513 (653)
                                                        ..                     ......+||..|+|||++.+...
T Consensus       233 Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GH  312 (459)
T KOG0610|consen  233 PTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGH  312 (459)
T ss_pred             CeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCC
Confidence                                              00                     01123468999999999999999


Q ss_pred             CCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhccCcC-CHHHHHHHHHHHHHcCCCCCC
Q 048419          514 TTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYY-DLAEAELVLNLGLFCSAPNPV  592 (653)
Q Consensus       514 ~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~-~~~~~~~l~~l~~~Cl~~dP~  592 (653)
                      +.+.|-|+|||++|||+.|..||.+....+.               +..++-+.+... ....+..+.+||.+.|..||.
T Consensus       313 gsAVDWWtfGIflYEmLyG~TPFKG~~~~~T---------------l~NIv~~~l~Fp~~~~vs~~akDLIr~LLvKdP~  377 (459)
T KOG0610|consen  313 GSAVDWWTFGIFLYEMLYGTTPFKGSNNKET---------------LRNIVGQPLKFPEEPEVSSAAKDLIRKLLVKDPS  377 (459)
T ss_pred             CchhhHHHHHHHHHHHHhCCCCcCCCCchhh---------------HHHHhcCCCcCCCCCcchhHHHHHHHHHhccChh
Confidence            9999999999999999999999998765432               222332323111 114457789999999999999


Q ss_pred             CCCC----HHHHHHHH---------cCCCCCCCCCCcccc
Q 048419          593 YRPD----MRRVVEFL---------LGDSSLPPLPPDIHL  619 (653)
Q Consensus       593 ~RPs----~~evl~~L---------~~~~~~p~~p~~~~~  619 (653)
                      +|--    +.||-++-         .....+|..|.....
T Consensus       378 kRlg~~rGA~eIK~HpFF~gVnWaLir~~~PP~iP~~~d~  417 (459)
T KOG0610|consen  378 KRLGSKRGAAEIKRHPFFEGVNWALIRCARPPEIPKPVDG  417 (459)
T ss_pred             hhhccccchHHhhcCccccCCChhheeccCCCcCCCcccc
Confidence            9998    88888754         234556666655443

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=100.00  E-value=4.3e-36  Score=304.52  Aligned_cols=249  Identities=30%  Similarity=0.410  Sum_probs=203.4

Q ss_pred             CcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc-----hhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEE
Q 048419          331 GFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS-----QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLV  405 (653)
Q Consensus       331 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV  405 (653)
                      +|+..+.||+|++|.||+|....++..|++|.+....     .+..+.+.+|+.++++++|+|++++++++...+.++++
T Consensus         1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv   80 (258)
T cd06632           1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF   80 (258)
T ss_pred             CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence            4667789999999999999998789999999986543     34567889999999999999999999999999999999


Q ss_pred             EeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccc
Q 048419          406 YDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIY  485 (653)
Q Consensus       406 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~  485 (653)
                      +||+++++|.+++...     ..+++..++.++.|++.||.|||+   .+++|+||+|+||+++.++.+||+|||++...
T Consensus        81 ~e~~~~~~L~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~  152 (258)
T cd06632          81 LELVPGGSLAKLLKKY-----GSFPEPVIRLYTRQILLGLEYLHD---RNTVHRDIKGANILVDTNGVVKLADFGMAKQV  152 (258)
T ss_pred             EEecCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEccCccceec
Confidence            9999999999998653     247899999999999999999999   89999999999999999999999999998865


Q ss_pred             cCCCCCcccccccCCcccCccccccCC-CCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhh
Q 048419          486 EHGANPQTTHIVGTLGYLAPELTRTGK-ATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAI  564 (653)
Q Consensus       486 ~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  564 (653)
                      ....  ......++..|+|||.+.... ++.++|+||||+++|+|++|+.||.........  ..+.    .....    
T Consensus       153 ~~~~--~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~--~~~~----~~~~~----  220 (258)
T cd06632         153 VEFS--FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAV--FKIG----RSKEL----  220 (258)
T ss_pred             cccc--cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHH--HHHH----hcccC----
Confidence            4332  223456888999999987766 899999999999999999999999764422111  1110    00000    


Q ss_pred             hhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 048419          565 DQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEF  603 (653)
Q Consensus       565 d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  603 (653)
                          ..........+.+++.+||+.+|.+||++.+++++
T Consensus       221 ----~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~  255 (258)
T cd06632         221 ----PPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLEH  255 (258)
T ss_pred             ----CCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhcC
Confidence                11111234667889999999999999999999864

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>PHA03211 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=3e-36  Score=328.97  Aligned_cols=263  Identities=21%  Similarity=0.223  Sum_probs=200.2

Q ss_pred             hcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEec
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDY  408 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~  408 (653)
                      ..+|.+.+.||+|+||.||++.+...++.||||...      ...+.+|++++++|+|+||+++++++...+..++|||+
T Consensus       168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~------~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~  241 (461)
T PHA03211        168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW------YASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPK  241 (461)
T ss_pred             cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc------ccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEc
Confidence            447999999999999999999999989999999642      23456899999999999999999999999999999999


Q ss_pred             cCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCC
Q 048419          409 VPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHG  488 (653)
Q Consensus       409 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~  488 (653)
                      +. ++|.+++....    ..++|.+++.++.||+.||.|||+   ++|+||||||+||||+.++.+||+|||+++.....
T Consensus       242 ~~-~~L~~~l~~~~----~~l~~~~~~~i~~qi~~aL~yLH~---~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~  313 (461)
T PHA03211        242 YR-SDLYTYLGARL----RPLGLAQVTAVARQLLSAIDYIHG---EGIIHRDIKTENVLVNGPEDICLGDFGAACFARGS  313 (461)
T ss_pred             cC-CCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHH---CCEEECcCCHHHEEECCCCCEEEcccCCceecccc
Confidence            94 68888886542    358999999999999999999999   89999999999999999999999999999865432


Q ss_pred             CCC-cccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhh-----hHHHHHHHHHhhhcc-c---
Q 048419          489 ANP-QTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAA-----AELLLVDWVKELHLE-G---  558 (653)
Q Consensus       489 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~-----~~~~l~~~~~~~~~~-~---  558 (653)
                      ... ......||..|+|||++.+..++.++|||||||+||||++|..++......     ....+...+...... .   
T Consensus       314 ~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~  393 (461)
T PHA03211        314 WSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFP  393 (461)
T ss_pred             cccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCC
Confidence            211 122356999999999999989999999999999999999988665322110     011112222111000 0   


Q ss_pred             -----chhHhhhhc-----cCcC---CH----HHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          559 -----EITQAIDQT-----LDYY---DL----AEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       559 -----~~~~~~d~~-----l~~~---~~----~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                           .+.......     ....   ..    .....+.+|+.+||+.||.+|||+.|++++-.
T Consensus       394 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~hp~  457 (461)
T PHA03211        394 QHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRLPL  457 (461)
T ss_pred             CCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhCcc
Confidence                 000000000     0000   00    11246789999999999999999999998743

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=100.00  E-value=7.2e-36  Score=304.94  Aligned_cols=254  Identities=23%  Similarity=0.363  Sum_probs=203.5

Q ss_pred             CcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc------hhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEE
Q 048419          331 GFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS------QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLL  404 (653)
Q Consensus       331 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~------~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  404 (653)
                      +|+..+.||+|++|.||++....+++.||+|.+....      ....+.+..|+..+++++|+||+++++++.+.+..++
T Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~   80 (268)
T cd06630           1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL   80 (268)
T ss_pred             CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence            4777899999999999999998889999999986432      2235678999999999999999999999999999999


Q ss_pred             EEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCC-cEEEEeecCcc
Q 048419          405 VYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYL-NAKLGDFGLAK  483 (653)
Q Consensus       405 V~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~-~~kl~DfGla~  483 (653)
                      |+||+++++|.+++...     ..+++..++.++.|++.||.|||+   ++++|+||+|+||+++.++ .+||+|||++.
T Consensus        81 v~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~ql~~al~~LH~---~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~  152 (268)
T cd06630          81 FVEWMAGGSVSHLLSKY-----GAFKEAVIINYTEQLLRGLSYLHE---NQIIHRDVKGANLLIDSTGQRLRIADFGAAA  152 (268)
T ss_pred             EEeccCCCcHHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEEccccccc
Confidence            99999999999998653     347899999999999999999999   8999999999999998776 59999999998


Q ss_pred             cccCCCC---CcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccch
Q 048419          484 IYEHGAN---PQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEI  560 (653)
Q Consensus       484 ~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~  560 (653)
                      .......   .......++..|+|||.+.+..++.++||||+|+++++|++|+.||....................    
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~----  228 (268)
T cd06630         153 RLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATT----  228 (268)
T ss_pred             ccccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhccCC----
Confidence            6643211   111234578899999999888899999999999999999999999964432111111000000000    


Q ss_pred             hHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 048419          561 TQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEF  603 (653)
Q Consensus       561 ~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  603 (653)
                             ....+......+.+++.+|++.+|.+||++.+++.+
T Consensus       229 -------~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~  264 (268)
T cd06630         229 -------APSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKH  264 (268)
T ss_pred             -------CCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcC
Confidence                   011222345678899999999999999999999864

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=100.00  E-value=4.1e-36  Score=309.80  Aligned_cols=265  Identities=25%  Similarity=0.319  Sum_probs=203.2

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc--hhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEe
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS--QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYD  407 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E  407 (653)
                      ++|+..+.||+|++|.||+|.+..+++.||+|++....  ....+.+.+|+.++++++|+|++++++++...+..++|||
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e   80 (286)
T cd07847           1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE   80 (286)
T ss_pred             CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence            46788899999999999999999889999999986432  2234568899999999999999999999999999999999


Q ss_pred             ccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccC
Q 048419          408 YVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEH  487 (653)
Q Consensus       408 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~  487 (653)
                      |+++++|..++...     ..+++.+++.++.|++.||.|||+   ++++|+||||+||+++.++.+||+|||++.....
T Consensus        81 ~~~~~~l~~~~~~~-----~~~~~~~~~~~~~ql~~~l~~LH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~  152 (286)
T cd07847          81 YCDHTVLNELEKNP-----RGVPEHLIKKIIWQTLQAVNFCHK---HNCIHRDVKPENILITKQGQIKLCDFGFARILTG  152 (286)
T ss_pred             ccCccHHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCChhhEEEcCCCcEEECccccceecCC
Confidence            99998888776543     248999999999999999999999   9999999999999999999999999999987644


Q ss_pred             CCCCcccccccCCcccCcccccc-CCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHH-HHHhhhc-------cc
Q 048419          488 GANPQTTHIVGTLGYLAPELTRT-GKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVD-WVKELHL-------EG  558 (653)
Q Consensus       488 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~-~~~~~~~-------~~  558 (653)
                      ... ......++..|+|||.+.+ ..++.++||||||+++|||++|+.||......+...... .......       ..
T Consensus       153 ~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (286)
T cd07847         153 PGD-DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTN  231 (286)
T ss_pred             Ccc-cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccc
Confidence            321 1223457889999999865 457889999999999999999999997654332211110 0000000       00


Q ss_pred             ch-hHhhhhcc-CcCC-----HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 048419          559 EI-TQAIDQTL-DYYD-----LAEAELVLNLGLFCSAPNPVYRPDMRRVVEF  603 (653)
Q Consensus       559 ~~-~~~~d~~l-~~~~-----~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  603 (653)
                      .. .....+.. ....     ......+.+++.+||+.+|++||++.|++.+
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~  283 (286)
T cd07847         232 QFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEH  283 (286)
T ss_pred             cccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcC
Confidence            00 00000000 0000     1124678899999999999999999999865

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=100.00  E-value=1.1e-36  Score=309.73  Aligned_cols=241  Identities=23%  Similarity=0.380  Sum_probs=192.4

Q ss_pred             eeeeeeCcEEEEEEEeCCCCc-------EEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEec
Q 048419          336 NLVGSGGFGRVYRGLMPSLGL-------EVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDY  408 (653)
Q Consensus       336 ~~LG~G~fg~Vy~~~~~~~~~-------~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~  408 (653)
                      +.||+|+||.||+|.....+.       .+++|.+........+.+.+|+.++++++|+|++++++++...+..++||||
T Consensus         1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~   80 (258)
T cd05078           1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY   80 (258)
T ss_pred             CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence            369999999999998765443       4889988666556667889999999999999999999999998899999999


Q ss_pred             cCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCc--------EEEEeec
Q 048419          409 VPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLN--------AKLGDFG  480 (653)
Q Consensus       409 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~--------~kl~DfG  480 (653)
                      +++|+|.+++....    ..+++..++.++.||+.||.|||+   ++|+||||||+||+++.++.        ++++|||
T Consensus        81 ~~~g~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH~---~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g  153 (258)
T cd05078          81 VKFGSLDTYLKKNK----NLINISWKLEVAKQLAWALHFLED---KGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPG  153 (258)
T ss_pred             CCCCcHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCccceEEEecccccccCCCceEEecccc
Confidence            99999999997653    247899999999999999999999   99999999999999987765        6999999


Q ss_pred             CcccccCCCCCcccccccCCcccCccccccC-CCCCccceeehHHHHHHHHhCC-CCCChhhhhhHHHHHHHHHhhhccc
Q 048419          481 LAKIYEHGANPQTTHIVGTLGYLAPELTRTG-KATTSTDVYSYGILMLEVACGR-RSIEPQKAAAELLLVDWVKELHLEG  558 (653)
Q Consensus       481 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~ksDV~s~Gvvl~elltG~-~p~~~~~~~~~~~l~~~~~~~~~~~  558 (653)
                      ++.....     .....++..|+|||++.+. .++.++|||||||++|||++|. .|+..........   ...   ...
T Consensus       154 ~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~---~~~---~~~  222 (258)
T cd05078         154 ISITVLP-----KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQ---FYE---DRH  222 (258)
T ss_pred             cccccCC-----chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHH---HHH---ccc
Confidence            8865432     1234578899999999764 5789999999999999999995 5554332221110   000   000


Q ss_pred             chhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          559 EITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       559 ~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                                 ..+......+.+++.+||+.+|.+|||++++++.|+
T Consensus       223 -----------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~  258 (258)
T cd05078         223 -----------QLPAPKWTELANLINQCMDYEPDFRPSFRAIIRDLN  258 (258)
T ss_pred             -----------cCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence                       011112356889999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=100.00  E-value=5.9e-36  Score=304.36  Aligned_cols=256  Identities=26%  Similarity=0.406  Sum_probs=206.4

Q ss_pred             CcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC--chhhHHHHHHHHHHHhhcCCCceeeeeeeecc--cceeEEEE
Q 048419          331 GFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRK--QDELLLVY  406 (653)
Q Consensus       331 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~--~~~~~lV~  406 (653)
                      +|+..+.||.|+||.||++....++..+|+|.+...  .....+.+..|++.+++++|+|++++++++..  ....+++|
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~   80 (265)
T cd08217           1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM   80 (265)
T ss_pred             CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence            467789999999999999999888999999998643  34445678899999999999999999997754  44689999


Q ss_pred             eccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcC--CCCeEecCCCCCcEEEcCCCcEEEEeecCccc
Q 048419          407 DYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEEC--NQRVVHRDVKPSNILLDTYLNAKLGDFGLAKI  484 (653)
Q Consensus       407 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~--~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~  484 (653)
                      ||+++++|.+++...... ...+++.+++.++.||+.||.|||..+  ..+++|+||||+||++++++.+||+|||++..
T Consensus        81 e~~~~~~L~~~l~~~~~~-~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~  159 (265)
T cd08217          81 EYCEGGDLAQLIQKCKKE-RKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKI  159 (265)
T ss_pred             hhccCCCHHHHHHHHhhc-ccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEeccccccc
Confidence            999999999999764221 346899999999999999999999321  28999999999999999999999999999987


Q ss_pred             ccCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhh
Q 048419          485 YEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAI  564 (653)
Q Consensus       485 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  564 (653)
                      ...... ......++..|+|||.+.+..++.++||||||+++++|++|+.|+.......   +.+.+..    +.     
T Consensus       160 ~~~~~~-~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~---~~~~~~~----~~-----  226 (265)
T cd08217         160 LGHDSS-FAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQ---LASKIKE----GK-----  226 (265)
T ss_pred             ccCCcc-cccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHHH---HHHHHhc----CC-----
Confidence            654332 1233468899999999998889999999999999999999999998654211   1111111    11     


Q ss_pred             hhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 048419          565 DQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEF  603 (653)
Q Consensus       565 d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  603 (653)
                         ...........+.+++.+|++.+|.+||++.+|+++
T Consensus       227 ---~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~  262 (265)
T cd08217         227 ---FRRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQL  262 (265)
T ss_pred             ---CCCCccccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence               111222345678999999999999999999999975

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=100.00  E-value=4.6e-36  Score=310.68  Aligned_cols=266  Identities=26%  Similarity=0.281  Sum_probs=209.0

Q ss_pred             ccCHHHHHHhhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhc-CCCceeeeeeeec
Q 048419          319 RFKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRL-RHRNLVQLHGWCR  397 (653)
Q Consensus       319 ~f~~~el~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~  397 (653)
                      .+.+.++..++++|...+.||+|+||.||++....+++.+|+|.+.... .....+.+|+.+++++ +|+|++++++++.
T Consensus        11 ~~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~   89 (291)
T cd06639          11 MLGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGMFY   89 (291)
T ss_pred             hhhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEEEE
Confidence            3556777788999999999999999999999998889999999986432 2345677899999999 7999999999986


Q ss_pred             cc-----ceeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCC
Q 048419          398 KQ-----DELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYL  472 (653)
Q Consensus       398 ~~-----~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~  472 (653)
                      ..     +..++|+||+++++|.+++...... ...+++..++.++.|++.||.|||+   .+++|+||||+||+++.++
T Consensus        90 ~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dlkp~nili~~~~  165 (291)
T cd06639          90 KADKLVGGQLWLVLELCNGGSVTELVKGLLIC-GQRLDEAMISYILYGALLGLQHLHN---NRIIHRDVKGNNILLTTEG  165 (291)
T ss_pred             eccccCCCeeEEEEEECCCCcHHHHHHHhhhc-CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHEEEcCCC
Confidence            54     3589999999999999988653211 3458899999999999999999999   8999999999999999999


Q ss_pred             cEEEEeecCcccccCCCCCcccccccCCcccCccccccC-----CCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHH
Q 048419          473 NAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTG-----KATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLL  547 (653)
Q Consensus       473 ~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l  547 (653)
                      .+||+|||++........ ......|+..|+|||.+...     .++.++|||||||++|||++|+.|+.........  
T Consensus       166 ~~kl~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~--  242 (291)
T cd06639         166 GVKLVDFGVSAQLTSTRL-RRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTL--  242 (291)
T ss_pred             CEEEeecccchhcccccc-cccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHH--
Confidence            999999999886543221 11234678899999987543     3688999999999999999999999764432211  


Q ss_pred             HHHHHhhhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 048419          548 VDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEF  603 (653)
Q Consensus       548 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  603 (653)
                      .++.     .....     .+. ........+.+++.+||+.+|++||++.|++++
T Consensus       243 ~~~~-----~~~~~-----~~~-~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~  287 (291)
T cd06639         243 FKIP-----RNPPP-----TLL-HPEKWCRSFNHFISQCLIKDFEARPSVTHLLEH  287 (291)
T ss_pred             HHHh-----cCCCC-----CCC-cccccCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence            1110     00000     010 011223568899999999999999999999875

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=100.00  E-value=7.5e-36  Score=301.86  Aligned_cols=247  Identities=27%  Similarity=0.415  Sum_probs=199.6

Q ss_pred             eeeeeeCcEEEEEEEeCCCCcEEEEEEeccCch-hhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEeccCCCCc
Q 048419          336 NLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQ-QGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSL  414 (653)
Q Consensus       336 ~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL  414 (653)
                      ++||+|+||.||++.+.. ++.||+|.+..... ...+.+.+|++++++++|+||+++++++...+..++||||+++++|
T Consensus         1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l   79 (251)
T cd05041           1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSL   79 (251)
T ss_pred             CccccCCCceEEEEEEeC-CCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcH
Confidence            369999999999999987 89999999876533 3567899999999999999999999999999999999999999999


Q ss_pred             hhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCCCCcc-
Q 048419          415 DKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQT-  493 (653)
Q Consensus       415 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~-  493 (653)
                      .+++....    ..+++..++.++.+++.+|.|||+   ++++||||||+||+++.++.+||+|||++........... 
T Consensus        80 ~~~l~~~~----~~~~~~~~~~~~~~~~~~l~~lH~---~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~  152 (251)
T cd05041          80 LTFLRKKK----NRLTVKKLLQMSLDAAAGMEYLES---KNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSD  152 (251)
T ss_pred             HHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHh---CCEehhhcCcceEEEcCCCcEEEeeccccccccCCcceecc
Confidence            99986543    347889999999999999999999   8999999999999999999999999999986542221111 


Q ss_pred             cccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhccCcCC
Q 048419          494 THIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYYD  572 (653)
Q Consensus       494 ~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~  572 (653)
                      ....++..|+|||.+.++.++.++|||||||++|||++ |..||........   ...+....           .+ ..+
T Consensus       153 ~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~---~~~~~~~~-----------~~-~~~  217 (251)
T cd05041         153 GLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQT---RERIESGY-----------RM-PAP  217 (251)
T ss_pred             ccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHH---HHHHhcCC-----------CC-CCC
Confidence            11233567999999988899999999999999999999 7888865443211   11111100           00 011


Q ss_pred             HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          573 LAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       573 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                      ......+.+++.+||+.+|.+||++.||++.|.
T Consensus       218 ~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~  250 (251)
T cd05041         218 QLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQ  250 (251)
T ss_pred             ccCCHHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence            123457889999999999999999999999885

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=100.00  E-value=3e-36  Score=310.90  Aligned_cols=265  Identities=27%  Similarity=0.354  Sum_probs=202.7

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc--hhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEe
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS--QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYD  407 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E  407 (653)
                      ++|+..+.||+|+||.||+|.+..+++.||+|++....  ....+.+.+|++++++++|+||+++++++...+..++|+|
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   80 (286)
T cd07846           1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE   80 (286)
T ss_pred             CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence            46788899999999999999998889999999986432  2235678899999999999999999999999999999999


Q ss_pred             ccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccC
Q 048419          408 YVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEH  487 (653)
Q Consensus       408 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~  487 (653)
                      |+++++|..+....     ..+++.+++.++.||++||.|||+   .+++|+||+|+||++++++.+||+|||++.....
T Consensus        81 ~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~LH~---~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~  152 (286)
T cd07846          81 FVDHTVLDDLEKYP-----NGLDESRVRKYLFQILRGIEFCHS---HNIIHRDIKPENILVSQSGVVKLCDFGFARTLAA  152 (286)
T ss_pred             cCCccHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEECCCCcEEEEeeeeeeeccC
Confidence            99999888876543     238999999999999999999999   8999999999999999999999999999986544


Q ss_pred             CCCCcccccccCCcccCcccccc-CCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHH-HHHHHHhhhcccc----hh
Q 048419          488 GANPQTTHIVGTLGYLAPELTRT-GKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELL-LVDWVKELHLEGE----IT  561 (653)
Q Consensus       488 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~-l~~~~~~~~~~~~----~~  561 (653)
                      .. .......++..|+|||++.+ ..++.++||||||++++||++|+.|+......+... +..+.........    ..
T Consensus       153 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (286)
T cd07846         153 PG-EVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKN  231 (286)
T ss_pred             Cc-cccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccc
Confidence            32 22233457889999998865 457789999999999999999999987544322111 1111000000000    00


Q ss_pred             Hhhhhcc-Cc---------CCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 048419          562 QAIDQTL-DY---------YDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEF  603 (653)
Q Consensus       562 ~~~d~~l-~~---------~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  603 (653)
                      ...+... ..         ........+.+++.+||+.+|.+||++.+++++
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~  283 (286)
T cd07846         232 PLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHH  283 (286)
T ss_pred             hHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcC
Confidence            0000000 00         001224678999999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.2e-36  Score=321.00  Aligned_cols=243  Identities=26%  Similarity=0.310  Sum_probs=190.2

Q ss_pred             eeeeCcEEEEEEEeCCCCcEEEEEEeccCc---hhhHHHHHHHHHHHhhc---CCCceeeeeeeecccceeEEEEeccCC
Q 048419          338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNS---QQGMKEFVAEIMSMGRL---RHRNLVQLHGWCRKQDELLLVYDYVPN  411 (653)
Q Consensus       338 LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l---~H~niv~l~g~~~~~~~~~lV~E~~~~  411 (653)
                      ||+|+||.||+|....+++.||||++....   ......+..|..++.++   +||||+++++++.+.+..++||||+++
T Consensus         1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~   80 (330)
T cd05586           1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG   80 (330)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence            799999999999999889999999986432   22334455677776665   699999999999999999999999999


Q ss_pred             CCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCCCC
Q 048419          412 GSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANP  491 (653)
Q Consensus       412 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~  491 (653)
                      |+|..++...     ..+++..+..++.||++||+|||+   ++|+||||||+|||++.++.+||+|||+++...... .
T Consensus        81 g~L~~~l~~~-----~~~~~~~~~~~~~qil~al~~LH~---~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~-~  151 (330)
T cd05586          81 GELFWHLQKE-----GRFSEDRAKFYIAELVLALEHLHK---YDIVYRDLKPENILLDATGHIALCDFGLSKANLTDN-K  151 (330)
T ss_pred             ChHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCC-C
Confidence            9999888653     348899999999999999999999   899999999999999999999999999987543221 2


Q ss_pred             cccccccCCcccCccccccC-CCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhccCc
Q 048419          492 QTTHIVGTLGYLAPELTRTG-KATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDY  570 (653)
Q Consensus       492 ~~~~~~gt~~y~aPE~~~~~-~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~  570 (653)
                      ......||..|+|||.+.+. .++.++|||||||++|||++|+.||........   ...+    ..+..      .+. 
T Consensus       152 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~---~~~i----~~~~~------~~~-  217 (330)
T cd05586         152 TTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQM---YRNI----AFGKV------RFP-  217 (330)
T ss_pred             CccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHH---HHHH----HcCCC------CCC-
Confidence            22345789999999998754 478999999999999999999999976433211   0000    01100      000 


Q ss_pred             CCHHHHHHHHHHHHHcCCCCCCCCC----CHHHHHHHH
Q 048419          571 YDLAEAELVLNLGLFCSAPNPVYRP----DMRRVVEFL  604 (653)
Q Consensus       571 ~~~~~~~~l~~l~~~Cl~~dP~~RP----s~~evl~~L  604 (653)
                       .......+.+++.+||+.||.+||    ++.+++++-
T Consensus       218 -~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h~  254 (330)
T cd05586         218 -KNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEHP  254 (330)
T ss_pred             -CccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcCc
Confidence             011235678999999999999998    567776643

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=100.00  E-value=3.9e-36  Score=317.35  Aligned_cols=256  Identities=27%  Similarity=0.318  Sum_probs=214.9

Q ss_pred             HhhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCch---hhHHHHHHHHHHHhhcC-CCceeeeeeeeccccee
Q 048419          327 SVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQ---QGMKEFVAEIMSMGRLR-HRNLVQLHGWCRKQDEL  402 (653)
Q Consensus       327 ~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~  402 (653)
                      .....|...+.||+|.||.||+++.+.+|+.+|+|.+.+...   ...+...+|+.+|+++. |||||.+.+.++....+
T Consensus        32 ~~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~  111 (382)
T KOG0032|consen   32 DIKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSV  111 (382)
T ss_pred             cccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeE
Confidence            344567778999999999999999999999999999976533   34568899999999998 99999999999999999


Q ss_pred             EEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCC----CcEEEEe
Q 048419          403 LLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTY----LNAKLGD  478 (653)
Q Consensus       403 ~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~----~~~kl~D  478 (653)
                      ++|||+|.||.|.+.+...      .+++.....++.|++.++.|||+   .+|+||||||+|+|+...    +.+|++|
T Consensus       112 ~lvmEL~~GGeLfd~i~~~------~~sE~da~~~~~~il~av~~lH~---~gvvHrDlKpEN~L~~~~~~~~~~ik~~D  182 (382)
T KOG0032|consen  112 YLVMELCEGGELFDRIVKK------HYSERDAAGIIRQILEAVKYLHS---LGVVHRDLKPENLLLASKDEGSGRIKLID  182 (382)
T ss_pred             EEEEEecCCchHHHHHHHc------cCCHHHHHHHHHHHHHHHHHHHh---CCceeccCCHHHeeeccccCCCCcEEEee
Confidence            9999999999999999765      28899999999999999999999   999999999999999433    5799999


Q ss_pred             ecCcccccCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhccc
Q 048419          479 FGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEG  558 (653)
Q Consensus       479 fGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~  558 (653)
                      ||++.....  .......+||+.|+|||.+....++..+||||+||++|.|++|..||..........  .     ...+
T Consensus       183 FGla~~~~~--~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~--~-----i~~~  253 (382)
T KOG0032|consen  183 FGLAKFIKP--GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFL--A-----ILRG  253 (382)
T ss_pred             CCCceEccC--CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHH--H-----HHcC
Confidence            999998765  345566799999999999999999999999999999999999999998766433221  1     1111


Q ss_pred             chhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          559 EITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       559 ~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                      +.     ..-...-......+.+++..|+..||..|+++.+++++.+
T Consensus       254 ~~-----~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~HpW  295 (382)
T KOG0032|consen  254 DF-----DFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQHPW  295 (382)
T ss_pred             CC-----CCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcCcc
Confidence            11     0001111233677899999999999999999999999754

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=100.00  E-value=3.2e-36  Score=312.23  Aligned_cols=248  Identities=23%  Similarity=0.357  Sum_probs=202.7

Q ss_pred             ceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEeccCCCCc
Q 048419          335 QNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSL  414 (653)
Q Consensus       335 ~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL  414 (653)
                      ...||+|+||.||++....++..||||.+........+.+.+|+..+++++|+|++++++.+...+..++||||+++++|
T Consensus        27 ~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L  106 (292)
T cd06658          27 FIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGAL  106 (292)
T ss_pred             hhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCCcH
Confidence            45699999999999999888999999998766656667889999999999999999999999999999999999999999


Q ss_pred             hhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCCCCccc
Q 048419          415 DKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTT  494 (653)
Q Consensus       415 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~  494 (653)
                      .+++...      .+++.+++.++.||+.||.|||+   ++++||||||+||++++++.+||+|||++....... ....
T Consensus       107 ~~~~~~~------~l~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~-~~~~  176 (292)
T cd06658         107 TDIVTHT------RMNEEQIATVCLSVLRALSYLHN---QGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEV-PKRK  176 (292)
T ss_pred             HHHHhcC------CCCHHHHHHHHHHHHHHHHHHHH---CCEeecCCCHHHEEEcCCCCEEEccCcchhhccccc-ccCc
Confidence            9988532      37889999999999999999999   899999999999999999999999999987653322 2223


Q ss_pred             ccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhccCcCCHH
Q 048419          495 HIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYYDLA  574 (653)
Q Consensus       495 ~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~  574 (653)
                      ...|+..|+|||.+.+..++.++||||||+++|||++|+.||..........   .+.         ..+.+.+. ....
T Consensus       177 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~---~~~---------~~~~~~~~-~~~~  243 (292)
T cd06658         177 SLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMR---RIR---------DNLPPRVK-DSHK  243 (292)
T ss_pred             eeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH---HHH---------hcCCCccc-cccc
Confidence            3468899999999988889999999999999999999999997544322111   000         00111110 0112


Q ss_pred             HHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          575 EAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       575 ~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                      ....+..++.+||+.||.+|||+.|++++-.
T Consensus       244 ~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~  274 (292)
T cd06658         244 VSSVLRGFLDLMLVREPSQRATAQELLQHPF  274 (292)
T ss_pred             cCHHHHHHHHHHccCChhHCcCHHHHhhChh
Confidence            2356788999999999999999999998743

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>PHA03209 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=6.6e-36  Score=318.81  Aligned_cols=261  Identities=22%  Similarity=0.291  Sum_probs=196.6

Q ss_pred             hhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEe
Q 048419          328 VTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYD  407 (653)
Q Consensus       328 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E  407 (653)
                      ...+|...+.||+|+||.||+|....++..||+|.....      ....|+.++++++|+||+++++++...+..++|+|
T Consensus        64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  137 (357)
T PHA03209         64 ASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLP  137 (357)
T ss_pred             hhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEE
Confidence            345799999999999999999999988999999985332      23468999999999999999999999999999999


Q ss_pred             ccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccC
Q 048419          408 YVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEH  487 (653)
Q Consensus       408 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~  487 (653)
                      ++. ++|.+++...    ...+++.+++.|+.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+++....
T Consensus       138 ~~~-~~l~~~l~~~----~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~  209 (357)
T PHA03209        138 HYS-SDLYTYLTKR----SRPLPIDQALIIEKQILEGLRYLHA---QRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVV  209 (357)
T ss_pred             ccC-CcHHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEEecCcccccccc
Confidence            995 6888888654    2458999999999999999999999   8999999999999999999999999999975332


Q ss_pred             CCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhh--------HHHHHHHHHhhhc-cc
Q 048419          488 GANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAA--------ELLLVDWVKELHL-EG  558 (653)
Q Consensus       488 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~--------~~~l~~~~~~~~~-~~  558 (653)
                      .  .......||..|+|||++.+..++.++|||||||++|||+++..++.......        ...+.+.+..... ..
T Consensus       210 ~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  287 (357)
T PHA03209        210 A--PAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPE  287 (357)
T ss_pred             C--cccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChh
Confidence            1  22233568999999999998899999999999999999999766543221110        1111111111100 00


Q ss_pred             ch---------hHhhhh-ccC-----cC----CHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          559 EI---------TQAIDQ-TLD-----YY----DLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       559 ~~---------~~~~d~-~l~-----~~----~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                      ..         ...++. ...     .+    .......+..++.+||+.||.+|||+.||+++-
T Consensus       288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~hp  352 (357)
T PHA03209        288 EFPRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNYP  352 (357)
T ss_pred             hcCCCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcCc
Confidence            00         000000 000     00    001123456799999999999999999999863

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=100.00  E-value=1.1e-35  Score=303.21  Aligned_cols=257  Identities=25%  Similarity=0.357  Sum_probs=208.0

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc-hhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEec
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS-QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDY  408 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~  408 (653)
                      ++|+..+.||.|+||.||+|....++..+++|++.... ....+.+.+|++.++.++|+|++++++.+...+..++|+|+
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~   80 (267)
T cd06610           1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY   80 (267)
T ss_pred             CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence            46888999999999999999988889999999986542 33567899999999999999999999999999999999999


Q ss_pred             cCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCC
Q 048419          409 VPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHG  488 (653)
Q Consensus       409 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~  488 (653)
                      +++++|.+++.....  ...+++.....++.|++.||.|||+   .+++|+||+|+||++++++.+||+|||++......
T Consensus        81 ~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~ql~~al~~lh~---~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~  155 (267)
T cd06610          81 LSGGSLLDIMKSSYP--RGGLDEAIIATVLKEVLKGLEYLHS---NGQIHRDIKAGNILLGEDGSVKIADFGVSASLADG  155 (267)
T ss_pred             cCCCcHHHHHHHhcc--cCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHhEEEcCCCCEEEcccchHHHhccC
Confidence            999999999976432  2458899999999999999999999   99999999999999999999999999998866543


Q ss_pred             CCC---cccccccCCcccCccccccC-CCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhh
Q 048419          489 ANP---QTTHIVGTLGYLAPELTRTG-KATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAI  564 (653)
Q Consensus       489 ~~~---~~~~~~gt~~y~aPE~~~~~-~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  564 (653)
                      ...   ......|+..|+|||.+... .++.++|+|||||+++||++|+.||.......  .+.+....          .
T Consensus       156 ~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~--~~~~~~~~----------~  223 (267)
T cd06610         156 GDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMK--VLMLTLQN----------D  223 (267)
T ss_pred             ccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhh--hHHHHhcC----------C
Confidence            222   12334688999999998776 78899999999999999999999997543321  11111111          0


Q ss_pred             hhccCcC--CHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 048419          565 DQTLDYY--DLAEAELVLNLGLFCSAPNPVYRPDMRRVVEF  603 (653)
Q Consensus       565 d~~l~~~--~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  603 (653)
                      .+.+...  .......+.+++.+||+.||++||++.+++++
T Consensus       224 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~  264 (267)
T cd06610         224 PPSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKH  264 (267)
T ss_pred             CCCcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence            0111100  11234678899999999999999999999875

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=100.00  E-value=5.8e-36  Score=307.07  Aligned_cols=259  Identities=25%  Similarity=0.348  Sum_probs=205.2

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCC-----CCcEEEEEEeccCchh-hHHHHHHHHHHHhhcCCCceeeeeeeecccceeE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPS-----LGLEVAIKRIGHNSQQ-GMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELL  403 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~  403 (653)
                      ++|+..+.||+|+||.||+|+...     ....+++|.+.....+ ..+.+.+|++++++++|+||+++++++.+.+..+
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   84 (275)
T cd05046           5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY   84 (275)
T ss_pred             HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence            567888999999999999999643     3467999998654433 4678999999999999999999999999999999


Q ss_pred             EEEeccCCCCchhhhhcccccc----cccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEee
Q 048419          404 LVYDYVPNGSLDKLLFDKDHKL----RKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDF  479 (653)
Q Consensus       404 lV~E~~~~gsL~~~l~~~~~~~----~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df  479 (653)
                      +||||+++|+|.+++.......    ...+++.+++.++.|++.||+|||+   .+|+|+||||+||+++.++.++|+||
T Consensus        85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~---~~i~H~dlkp~Nili~~~~~~~l~~~  161 (275)
T cd05046          85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSN---ARFVHRDLAARNCLVSSQREVKVSLL  161 (275)
T ss_pred             EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhh---cCcccCcCccceEEEeCCCcEEEccc
Confidence            9999999999999997654211    1258999999999999999999999   89999999999999999999999999


Q ss_pred             cCcccccCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhhccc
Q 048419          480 GLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELHLEG  558 (653)
Q Consensus       480 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~  558 (653)
                      |++...............++..|+|||.+.+..++.++||||||+++|||++ |..||.......   ......    .+
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~---~~~~~~----~~  234 (275)
T cd05046         162 SLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEE---VLNRLQ----AG  234 (275)
T ss_pred             ccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHH---HHHHHH----cC
Confidence            9987543322222233456778999999988888999999999999999999 778886433211   111111    01


Q ss_pred             chhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          559 EITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       559 ~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                      ....       .........+.+++.+||+.+|.+||++.|+++.|.
T Consensus       235 ~~~~-------~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~  274 (275)
T cd05046         235 KLEL-------PVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG  274 (275)
T ss_pred             CcCC-------CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence            1000       001123457889999999999999999999999885

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=100.00  E-value=5.7e-36  Score=308.70  Aligned_cols=263  Identities=21%  Similarity=0.263  Sum_probs=205.5

Q ss_pred             CcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc--hhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEec
Q 048419          331 GFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS--QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDY  408 (653)
Q Consensus       331 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~  408 (653)
                      +|+..+.||+|++|.||+|.+..+|..||+|++....  ....+.+.+|+.++++++|+|++++++++...+..++|+||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~   80 (286)
T cd07832           1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY   80 (286)
T ss_pred             CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence            4677899999999999999998889999999987543  33456889999999999999999999999999999999999


Q ss_pred             cCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCC
Q 048419          409 VPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHG  488 (653)
Q Consensus       409 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~  488 (653)
                      + +++|.+++....    ..+++.+++.++.||++||.|||+   .+++|+||||+||+++.++.++|+|||++......
T Consensus        81 ~-~~~L~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~  152 (286)
T cd07832          81 M-PSDLSEVLRDEE----RPLPEAQVKSYMRMLLKGVAYMHA---NGIMHRDLKPANLLISADGVLKIADFGLARLFSEE  152 (286)
T ss_pred             c-CCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCcCHHHEEEcCCCcEEEeeeeecccccCC
Confidence            9 999999986543    458999999999999999999999   89999999999999999999999999999876543


Q ss_pred             CCCcccccccCCcccCccccccC-CCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccc---hh---
Q 048419          489 ANPQTTHIVGTLGYLAPELTRTG-KATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGE---IT---  561 (653)
Q Consensus       489 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~---~~---  561 (653)
                      .........++..|+|||.+.+. .++.++||||+||+++||++|+.++........   ..++........   ..   
T Consensus       153 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~  229 (286)
T cd07832         153 EPRLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQ---LAIVFRTLGTPNEETWPGLT  229 (286)
T ss_pred             CCCccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHH---HHHHHHHcCCCChHHHhhcc
Confidence            32223345688999999998654 468899999999999999999887765443221   111111110000   00   


Q ss_pred             ------HhhhhccC-----cCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          562 ------QAIDQTLD-----YYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       562 ------~~~d~~l~-----~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                            ....+...     .........+.+++.+||+.+|.+||++++++++-
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h~  283 (286)
T cd07832         230 SLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHP  283 (286)
T ss_pred             CcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhCc
Confidence                  00000000     00012247889999999999999999999999863

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=100.00  E-value=5.3e-36  Score=315.79  Aligned_cols=257  Identities=22%  Similarity=0.272  Sum_probs=197.2

Q ss_pred             ceeeeee--CcEEEEEEEeCCCCcEEEEEEeccC--chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEeccC
Q 048419          335 QNLVGSG--GFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVP  410 (653)
Q Consensus       335 ~~~LG~G--~fg~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~  410 (653)
                      .++||+|  +|++||++....+|+.||+|++...  .....+.+.+|+++++.++||||++++++|...+..++|+||++
T Consensus         3 ~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~   82 (327)
T cd08227           3 LTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMA   82 (327)
T ss_pred             hhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEeccC
Confidence            5689999  7899999999999999999999654  23344567789999999999999999999999999999999999


Q ss_pred             CCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCCC
Q 048419          411 NGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGAN  490 (653)
Q Consensus       411 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~  490 (653)
                      +|+|.+++....   ...+++..++.++.|++.||.|||+   ++|+||||||+|||++.++.++++||+..........
T Consensus        83 ~~~l~~~~~~~~---~~~l~~~~~~~i~~qi~~~L~~LH~---~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~  156 (327)
T cd08227          83 YGSAKDLICTHF---MDGMSELAIAYILQGVLKALDYIHH---MGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQ  156 (327)
T ss_pred             CCcHHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCChhhEEEecCCcEEEcccchhhccccccc
Confidence            999999996543   2348899999999999999999999   8999999999999999999999999986543321110


Q ss_pred             -C-----cccccccCCcccCcccccc--CCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhH
Q 048419          491 -P-----QTTHIVGTLGYLAPELTRT--GKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQ  562 (653)
Q Consensus       491 -~-----~~~~~~gt~~y~aPE~~~~--~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~  562 (653)
                       .     ......++..|+|||++.+  ..++.++|||||||++|||++|+.||........  ......     +.+..
T Consensus       157 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~--~~~~~~-----~~~~~  229 (327)
T cd08227         157 RLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQM--LLEKLN-----GTVPC  229 (327)
T ss_pred             cccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHH--HHHHhc-----CCccc
Confidence             0     1112346778999999875  3588999999999999999999999975432211  111100     00000


Q ss_pred             hhh-------------------hcc------------------CcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          563 AID-------------------QTL------------------DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       563 ~~d-------------------~~l------------------~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                      .++                   ...                  ..........+.+++.+||+.||++|||+.|++++-
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p  308 (327)
T cd08227         230 LLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHS  308 (327)
T ss_pred             cccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcCh
Confidence            000                   000                  001112345788999999999999999999999754

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=100.00  E-value=7.4e-36  Score=305.29  Aligned_cols=256  Identities=25%  Similarity=0.411  Sum_probs=203.2

Q ss_pred             CcCcceeeeeeCcEEEEEEEeCC-CCcEEEEEEeccC----------chhhHHHHHHHHHHHhh-cCCCceeeeeeeecc
Q 048419          331 GFGEQNLVGSGGFGRVYRGLMPS-LGLEVAIKRIGHN----------SQQGMKEFVAEIMSMGR-LRHRNLVQLHGWCRK  398 (653)
Q Consensus       331 ~f~~~~~LG~G~fg~Vy~~~~~~-~~~~vavK~~~~~----------~~~~~~~~~~E~~~l~~-l~H~niv~l~g~~~~  398 (653)
                      +|+..+.||+|+||.||+|.+.. .++.+|+|.+...          ......++.+|+.++.+ ++|+||+++++++.+
T Consensus         1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~   80 (269)
T cd08528           1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE   80 (269)
T ss_pred             CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence            47778899999999999999877 6789999987532          22344567788888875 799999999999999


Q ss_pred             cceeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEe
Q 048419          399 QDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGD  478 (653)
Q Consensus       399 ~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D  478 (653)
                      .+..+++|||+++++|.+++...... ...+++..+++++.|++.+|.|||+.  .+++|+||+|+||+++.++.+||+|
T Consensus        81 ~~~~~lv~e~~~~~~l~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~~--~~i~H~dl~~~nil~~~~~~~~l~d  157 (269)
T cd08528          81 NDRLYIVMDLIEGAPLGEHFNSLKEK-KQRFTEERIWNIFVQMVLALRYLHKE--KRIVHRDLTPNNIMLGEDDKVTITD  157 (269)
T ss_pred             CCeEEEEEecCCCCcHHHHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHhccC--CceeecCCCHHHEEECCCCcEEEec
Confidence            99999999999999999988543211 34588999999999999999999952  6899999999999999999999999


Q ss_pred             ecCcccccCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhccc
Q 048419          479 FGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEG  558 (653)
Q Consensus       479 fGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~  558 (653)
                      ||++.......  ......++..|+|||.+.+..++.++||||||+++|||++|+.|+........   ...+.    .+
T Consensus       158 fg~~~~~~~~~--~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~---~~~~~----~~  228 (269)
T cd08528         158 FGLAKQKQPES--KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSL---ATKIV----EA  228 (269)
T ss_pred             ccceeeccccc--ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHH---HHHHh----hc
Confidence            99998654332  23345688999999999988899999999999999999999999875432211   11110    00


Q ss_pred             chhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          559 EITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       559 ~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                      ...    + .  ........+.+++.+||+.||++||++.|+.++++
T Consensus       229 ~~~----~-~--~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~  268 (269)
T cd08528         229 VYE----P-L--PEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS  268 (269)
T ss_pred             cCC----c-C--CcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence            000    0 0  00112456889999999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=6.7e-36  Score=313.30  Aligned_cols=253  Identities=25%  Similarity=0.338  Sum_probs=205.5

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCch---hhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQ---QGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVY  406 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  406 (653)
                      ++|+..+.||+|++|.||+|....+++.+|+|.+.....   ...+.+..|++.+++++|+||+++++.+...+..++||
T Consensus         1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~   80 (316)
T cd05574           1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM   80 (316)
T ss_pred             CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence            468888999999999999999998899999999975432   35567889999999999999999999999999999999


Q ss_pred             eccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccccc
Q 048419          407 DYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE  486 (653)
Q Consensus       407 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~  486 (653)
                      ||+.+++|.+++....   ...+++..+..++.|+++||+|||+   .+++|+||||+||+++.++.++|+|||++....
T Consensus        81 e~~~~~~L~~~~~~~~---~~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~  154 (316)
T cd05574          81 DYCPGGELFRLLQRQP---GKCLSEEVARFYAAEVLLALEYLHL---LGIVYRDLKPENILLHESGHIMLSDFDLSKQSD  154 (316)
T ss_pred             EecCCCCHHHHHHhCC---CCccCHHHHHHHHHHHHHHHHHHHH---CCeeccCCChHHeEEcCCCCEEEeecchhhccc
Confidence            9999999999987543   3458899999999999999999999   899999999999999999999999999987543


Q ss_pred             CCCCC----------------------------cccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCCh
Q 048419          487 HGANP----------------------------QTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEP  538 (653)
Q Consensus       487 ~~~~~----------------------------~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~  538 (653)
                      .....                            ......|+..|+|||++.+..++.++||||||+++|+|++|+.||..
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~  234 (316)
T cd05574         155 VEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKG  234 (316)
T ss_pred             ccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCC
Confidence            22110                            11123578899999999988899999999999999999999999976


Q ss_pred             hhhhhHHHHHHHHHhhhcccchhHhhhhccC-cCCHHHHHHHHHHHHHcCCCCCCCCCC----HHHHHHH
Q 048419          539 QKAAAELLLVDWVKELHLEGEITQAIDQTLD-YYDLAEAELVLNLGLFCSAPNPVYRPD----MRRVVEF  603 (653)
Q Consensus       539 ~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~-~~~~~~~~~l~~l~~~Cl~~dP~~RPs----~~evl~~  603 (653)
                      ......  +..             ....... .........+.+++.+||+.+|++||+    +.|++++
T Consensus       235 ~~~~~~--~~~-------------~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~  289 (316)
T cd05574         235 SNRDET--FSN-------------ILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQH  289 (316)
T ss_pred             CchHHH--HHH-------------HhcCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcC
Confidence            543211  111             1111110 001114577999999999999999999    7777764

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=8.4e-36  Score=306.76  Aligned_cols=255  Identities=26%  Similarity=0.381  Sum_probs=203.7

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCc----EEEEEEeccCc-hhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGL----EVAIKRIGHNS-QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLL  404 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  404 (653)
                      .+|+..+.||+|+||.||+|....++.    .+|+|.+.... ......+.+|+..+++++|+|+++++++|.. ...++
T Consensus         7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~   85 (279)
T cd05057           7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQL   85 (279)
T ss_pred             HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEE
Confidence            456778899999999999999865554    58999886553 4456788999999999999999999999987 78899


Q ss_pred             EEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccc
Q 048419          405 VYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKI  484 (653)
Q Consensus       405 V~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~  484 (653)
                      |+||+++|+|.+++....    ..+++..++.++.||+.||+|||+   ++++|+||||+||++++++.+||+|||+++.
T Consensus        86 v~e~~~~g~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~LH~---~~i~H~di~p~nil~~~~~~~kL~dfg~~~~  158 (279)
T cd05057          86 ITQLMPLGCLLDYVRNHK----DNIGSQYLLNWCVQIAKGMSYLEE---KRLVHRDLAARNVLVKTPQHVKITDFGLAKL  158 (279)
T ss_pred             EEecCCCCcHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHh---CCEEecccCcceEEEcCCCeEEECCCccccc
Confidence            999999999999997653    348999999999999999999999   9999999999999999999999999999987


Q ss_pred             ccCCCCCcc-cccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhhcccchhH
Q 048419          485 YEHGANPQT-THIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELHLEGEITQ  562 (653)
Q Consensus       485 ~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~  562 (653)
                      ......... ....++..|+|||.+....++.++||||||+++|||++ |+.||......+   +.+.+..    +..  
T Consensus       159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~---~~~~~~~----~~~--  229 (279)
T cd05057         159 LDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVE---IPDLLEK----GER--  229 (279)
T ss_pred             ccCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHH---HHHHHhC----CCC--
Confidence            653322111 11223568999999988889999999999999999999 999997643321   1111111    100  


Q ss_pred             hhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcCC
Q 048419          563 AIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLGD  607 (653)
Q Consensus       563 ~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  607 (653)
                           . ..+......+.+++.+||..+|.+||++.++++.|...
T Consensus       230 -----~-~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~  268 (279)
T cd05057         230 -----L-PQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKM  268 (279)
T ss_pred             -----C-CCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence                 0 01111235678999999999999999999999999764

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=100.00  E-value=7.2e-36  Score=304.01  Aligned_cols=249  Identities=24%  Similarity=0.394  Sum_probs=192.6

Q ss_pred             eeeeeeCcEEEEEEEeCC---CCcEEEEEEeccC-chhhHHHHHHHHHHHhhcCCCceeeeeeeecc-cceeEEEEeccC
Q 048419          336 NLVGSGGFGRVYRGLMPS---LGLEVAIKRIGHN-SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRK-QDELLLVYDYVP  410 (653)
Q Consensus       336 ~~LG~G~fg~Vy~~~~~~---~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~-~~~~~lV~E~~~  410 (653)
                      +.||+|+||.||+|.+.+   ....+|+|++... .....+.+.+|+.+++.++|||+++++++|.. ++..++|+||++
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~   80 (262)
T cd05058           1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK   80 (262)
T ss_pred             CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence            468999999999998643   3467999998543 34456788899999999999999999998764 456789999999


Q ss_pred             CCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCCC
Q 048419          411 NGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGAN  490 (653)
Q Consensus       411 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~  490 (653)
                      +++|.+++....    ..+++..+..++.|++.||.|||+   .+++||||||+|||+++++.+||+|||+++.......
T Consensus        81 ~~~L~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~  153 (262)
T cd05058          81 HGDLRNFIRSET----HNPTVKDLIGFGLQVAKGMEYLAS---KKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEY  153 (262)
T ss_pred             CCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHh---CCccccccCcceEEEcCCCcEEECCccccccccCCcc
Confidence            999999997543    236777888999999999999999   8999999999999999999999999999975532211


Q ss_pred             ---CcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCC-CCCChhhhhhHHHHHHHHHhhhcccchhHhhhh
Q 048419          491 ---PQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGR-RSIEPQKAAAELLLVDWVKELHLEGEITQAIDQ  566 (653)
Q Consensus       491 ---~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~-~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  566 (653)
                         .......++..|+|||.+.+..++.++|||||||++|||++|+ .|+......   .+...+..    +.       
T Consensus       154 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~---~~~~~~~~----~~-------  219 (262)
T cd05058         154 YSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSF---DITVYLLQ----GR-------  219 (262)
T ss_pred             eeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHH---HHHHHHhc----CC-------
Confidence               1112234567899999998888999999999999999999965 455433221   11111111    00       


Q ss_pred             ccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          567 TLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       567 ~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                      .. ..+...+..+.+++..||+.+|++||++.+|++.|+.
T Consensus       220 ~~-~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~  258 (262)
T cd05058         220 RL-LQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQ  258 (262)
T ss_pred             CC-CCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHH
Confidence            00 0011123568899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=100.00  E-value=7.1e-36  Score=305.31  Aligned_cols=252  Identities=29%  Similarity=0.469  Sum_probs=199.3

Q ss_pred             eeeeeeCcEEEEEEEeCCCC------cEEEEEEeccCc-hhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEec
Q 048419          336 NLVGSGGFGRVYRGLMPSLG------LEVAIKRIGHNS-QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDY  408 (653)
Q Consensus       336 ~~LG~G~fg~Vy~~~~~~~~------~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~  408 (653)
                      +.||+|+||.||+|...+..      +.+|||.+.... ......+.+|+..+++++||||++++++|...+..++||||
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (269)
T cd05044           1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL   80 (269)
T ss_pred             CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence            36999999999999876433      689999886543 34567889999999999999999999999999999999999


Q ss_pred             cCCCCchhhhhccccc--ccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCC-----cEEEEeecC
Q 048419          409 VPNGSLDKLLFDKDHK--LRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYL-----NAKLGDFGL  481 (653)
Q Consensus       409 ~~~gsL~~~l~~~~~~--~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~-----~~kl~DfGl  481 (653)
                      +++++|.+++......  ....+++.+++.++.|++.||.|||+   .+++|+||||+||+++.+.     .+||+|||+
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~  157 (269)
T cd05044          81 MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQ---MHFIHRDLAARNCLVSEKGYDADRVVKIGDFGL  157 (269)
T ss_pred             cCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHh---CCcccCCCChheEEEecCCCCCCcceEECCccc
Confidence            9999999999754221  12447899999999999999999999   8999999999999998877     899999999


Q ss_pred             cccccCCCC-CcccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhhcccc
Q 048419          482 AKIYEHGAN-PQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELHLEGE  559 (653)
Q Consensus       482 a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~  559 (653)
                      ++....... .......++..|+|||.+.++.++.++|||||||++|||++ |+.||.......   ....+..    +.
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~---~~~~~~~----~~  230 (269)
T cd05044         158 ARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQE---VLQHVTA----GG  230 (269)
T ss_pred             ccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHH---HHHHHhc----CC
Confidence            976533211 11122345678999999999999999999999999999998 999986543321   1111111    00


Q ss_pred             hhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          560 ITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       560 ~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                             .. .........+.+++.+||+.+|.+||++.+|++.|+
T Consensus       231 -------~~-~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~  268 (269)
T cd05044         231 -------RL-QKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ  268 (269)
T ss_pred             -------cc-CCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence                   00 111123467889999999999999999999999985

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=100.00  E-value=1.6e-35  Score=302.16  Aligned_cols=252  Identities=25%  Similarity=0.344  Sum_probs=200.0

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC-----chhhHHHHHHHHHHHhhcCCCceeeeeeeeccc--cee
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN-----SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQ--DEL  402 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~--~~~  402 (653)
                      .+|+..+.||+|+||.||+|....++..||||.+...     .....+.+.+|+.++++++|+||+++++++.+.  ..+
T Consensus         2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (265)
T cd06652           2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL   81 (265)
T ss_pred             CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence            4688899999999999999999988999999988532     123456788999999999999999999988664  467


Q ss_pred             EEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCc
Q 048419          403 LLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLA  482 (653)
Q Consensus       403 ~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla  482 (653)
                      +++|||+++++|.+++...     ..+++...++++.|++.||.|||+   ++++|+||||+||+++.++.+||+|||++
T Consensus        82 ~~v~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~~l~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~~l~Dfg~~  153 (265)
T cd06652          82 SIFMEHMPGGSIKDQLKSY-----GALTENVTRKYTRQILEGVSYLHS---NMIVHRDIKGANILRDSVGNVKLGDFGAS  153 (265)
T ss_pred             EEEEEecCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEecCCCCEEECcCccc
Confidence            8999999999999998653     237888899999999999999999   89999999999999999999999999998


Q ss_pred             ccccCCCC--CcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccch
Q 048419          483 KIYEHGAN--PQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEI  560 (653)
Q Consensus       483 ~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~  560 (653)
                      +.......  .......++..|+|||.+.+..++.++|||||||++|||++|+.||.........  ..    .....  
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~--~~----~~~~~--  225 (265)
T cd06652         154 KRLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAI--FK----IATQP--  225 (265)
T ss_pred             cccccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHHH--HH----HhcCC--
Confidence            86532111  1122345888999999998888999999999999999999999999754322111  00    00000  


Q ss_pred             hHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          561 TQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       561 ~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                            .....+......+.+++.+|+. +|.+||++.||+++-
T Consensus       226 ------~~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~~  262 (265)
T cd06652         226 ------TNPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLRHT  262 (265)
T ss_pred             ------CCCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcCc
Confidence                  0011222344567788889985 999999999998754

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=100.00  E-value=7.9e-36  Score=315.40  Aligned_cols=260  Identities=24%  Similarity=0.349  Sum_probs=203.9

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCC-------CCcEEEEEEeccC-chhhHHHHHHHHHHHhhc-CCCceeeeeeeecccc
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPS-------LGLEVAIKRIGHN-SQQGMKEFVAEIMSMGRL-RHRNLVQLHGWCRKQD  400 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~-------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~  400 (653)
                      .+|...+.||+|+||.||++....       .+..||+|.+... .....+.+.+|+.+++++ +|+||++++++|...+
T Consensus        12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~   91 (334)
T cd05100          12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG   91 (334)
T ss_pred             hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCC
Confidence            357788999999999999997532       1246999988654 334567899999999999 7999999999999999


Q ss_pred             eeEEEEeccCCCCchhhhhcccc-----------cccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEc
Q 048419          401 ELLLVYDYVPNGSLDKLLFDKDH-----------KLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLD  469 (653)
Q Consensus       401 ~~~lV~E~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~  469 (653)
                      ..++++||+++|+|.+++.....           .....++|.+++.++.|++.||.|||+   ++++||||||+|||++
T Consensus        92 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~---~givH~dlkp~Nill~  168 (334)
T cd05100          92 PLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLAS---QKCIHRDLAARNVLVT  168 (334)
T ss_pred             ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHH---CCeeccccccceEEEc
Confidence            99999999999999999976421           012358899999999999999999999   9999999999999999


Q ss_pred             CCCcEEEEeecCcccccCCCCC-cccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHH
Q 048419          470 TYLNAKLGDFGLAKIYEHGANP-QTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLL  547 (653)
Q Consensus       470 ~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l  547 (653)
                      .++.+||+|||+++........ ......++..|+|||.+.+..++.++||||||+++|||++ |..||.......   +
T Consensus       169 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~---~  245 (334)
T cd05100         169 EDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE---L  245 (334)
T ss_pred             CCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHH---H
Confidence            9999999999999865432211 1122234567999999998889999999999999999998 888886543221   1


Q ss_pred             HHHHHhhhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcCC
Q 048419          548 VDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLGD  607 (653)
Q Consensus       548 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  607 (653)
                      ...+..    +..        ..........+.+++.+||+.+|.+||++.|+++.|+.-
T Consensus       246 ~~~~~~----~~~--------~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~  293 (334)
T cd05100         246 FKLLKE----GHR--------MDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRV  293 (334)
T ss_pred             HHHHHc----CCC--------CCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHH
Confidence            111111    000        011112345788999999999999999999999999754

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=100.00  E-value=1.5e-35  Score=301.65  Aligned_cols=253  Identities=28%  Similarity=0.462  Sum_probs=204.3

Q ss_pred             CcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCch--hhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEec
Q 048419          331 GFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQ--QGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDY  408 (653)
Q Consensus       331 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~  408 (653)
                      +|...+.||+|+||.||+|....++..|++|.+.....  ...+.+.+|++++++++|+||+++++++...+..++|+||
T Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (264)
T cd06626           1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY   80 (264)
T ss_pred             CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence            47778999999999999999988899999999876543  3677899999999999999999999999999999999999


Q ss_pred             cCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCC
Q 048419          409 VPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHG  488 (653)
Q Consensus       409 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~  488 (653)
                      +++++|.+++...     ..+++..+..++.|+++||.|||+   .+++|+||+|+||++++++.+||+|||++......
T Consensus        81 ~~~~~L~~~~~~~-----~~~~~~~~~~i~~~i~~~l~~lh~---~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~  152 (264)
T cd06626          81 CSGGTLEELLEHG-----RILDEHVIRVYTLQLLEGLAYLHS---HGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNN  152 (264)
T ss_pred             CCCCcHHHHHhhc-----CCCChHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEcccccccccCCC
Confidence            9999999998653     247889999999999999999999   89999999999999999999999999999876443


Q ss_pred             CCCcc---cccccCCcccCccccccCC---CCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhH
Q 048419          489 ANPQT---THIVGTLGYLAPELTRTGK---ATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQ  562 (653)
Q Consensus       489 ~~~~~---~~~~gt~~y~aPE~~~~~~---~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~  562 (653)
                      .....   ....++..|+|||.+....   .+.++||||||++++||++|+.||..........  ..+..    +.   
T Consensus       153 ~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~--~~~~~----~~---  223 (264)
T cd06626         153 TTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIM--FHVGA----GH---  223 (264)
T ss_pred             CCcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHH--HHHhc----CC---
Confidence            22211   1346788999999998766   8899999999999999999999997543211110  00000    00   


Q ss_pred             hhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 048419          563 AIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEF  603 (653)
Q Consensus       563 ~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  603 (653)
                        .+.+.. .......+.+++.+||+.+|.+||++.+++.+
T Consensus       224 --~~~~~~-~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~  261 (264)
T cd06626         224 --KPPIPD-SLQLSPEGKDFLDRCLESDPKKRPTASELLQH  261 (264)
T ss_pred             --CCCCCc-ccccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence              001100 01124567899999999999999999998763

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=100.00  E-value=6.1e-36  Score=303.70  Aligned_cols=239  Identities=26%  Similarity=0.462  Sum_probs=191.7

Q ss_pred             eeeeeeCcEEEEEEEeCCCC----------cEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEE
Q 048419          336 NLVGSGGFGRVYRGLMPSLG----------LEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLV  405 (653)
Q Consensus       336 ~~LG~G~fg~Vy~~~~~~~~----------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV  405 (653)
                      +.||+|+||.||+|.+...+          ..+++|.+...... ...+.+|+.++++++|+||++++++|.. ...++|
T Consensus         1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv   78 (259)
T cd05037           1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMV   78 (259)
T ss_pred             CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEE
Confidence            36999999999999997665          35888887554433 6788999999999999999999999988 778999


Q ss_pred             EeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCC-------cEEEEe
Q 048419          406 YDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYL-------NAKLGD  478 (653)
Q Consensus       406 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~-------~~kl~D  478 (653)
                      +||+++|+|.+++....    ..+++..+..++.||+.||+|||+   ++|+||||||+|||++.++       .+||+|
T Consensus        79 ~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~D  151 (259)
T cd05037          79 EEYVKFGPLDVFLHREK----NNVSLHWKLDVAKQLASALHYLED---KKLVHGNVCGKNILVARYGLNEGYVPFIKLSD  151 (259)
T ss_pred             EEcCCCCcHHHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHhh---CCeecccCccceEEEecCccccCCceeEEeCC
Confidence            99999999999997643    258899999999999999999999   9999999999999999888       799999


Q ss_pred             ecCcccccCCCCCcccccccCCcccCccccccC--CCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhh
Q 048419          479 FGLAKIYEHGANPQTTHIVGTLGYLAPELTRTG--KATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELH  555 (653)
Q Consensus       479 fGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~  555 (653)
                      ||++.....     .....++..|+|||++...  .++.++||||||+++|||++ |..|+..........   +..   
T Consensus       152 fg~a~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~---~~~---  220 (259)
T cd05037         152 PGIPITVLS-----REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKER---FYQ---  220 (259)
T ss_pred             CCccccccc-----ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHH---HHh---
Confidence            999986543     1223566789999998876  78899999999999999999 567775543211110   000   


Q ss_pred             cccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          556 LEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       556 ~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                      ...        .+   .......+.+++.+||+.+|.+||++.+|++.|+
T Consensus       221 ~~~--------~~---~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~  259 (259)
T cd05037         221 DQH--------RL---PMPDCAELANLINQCWTYDPTKRPSFRAILRDLN  259 (259)
T ss_pred             cCC--------CC---CCCCchHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence            000        00   0011267889999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.1e-36  Score=308.37  Aligned_cols=296  Identities=28%  Similarity=0.374  Sum_probs=237.4

Q ss_pred             CHHHHHHhhc-CcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC---chhhHHHHHHHHHHHhhcCCCceeeeeeee
Q 048419          321 KYAELASVTK-GFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN---SQQGMKEFVAEIMSMGRLRHRNLVQLHGWC  396 (653)
Q Consensus       321 ~~~el~~at~-~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~  396 (653)
                      ..-|+...|. .|+.-++||+||||.||-++...+|+.+|.|++.+.   .+++....++|-.+|++++.+.||.+--.+
T Consensus       175 K~lE~qpvt~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAf  254 (591)
T KOG0986|consen  175 KWLELQPVTKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAF  254 (591)
T ss_pred             HHHHhhhccccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeee
Confidence            3344444444 478889999999999999999999999999998654   344556678899999999999999999999


Q ss_pred             cccceeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEE
Q 048419          397 RKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKL  476 (653)
Q Consensus       397 ~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl  476 (653)
                      +..+.+|+|+..|.||+|.-+|.+.+   ...+++...+-.+.+|+-||++||.   ++||.|||||+|||||+.|+++|
T Consensus       255 eTkd~LClVLtlMNGGDLkfHiyn~g---~~gF~e~ra~FYAAEi~cGLehlH~---~~iVYRDLKPeNILLDd~GhvRI  328 (591)
T KOG0986|consen  255 ETKDALCLVLTLMNGGDLKFHIYNHG---NPGFDEQRARFYAAEIICGLEHLHR---RRIVYRDLKPENILLDDHGHVRI  328 (591)
T ss_pred             cCCCceEEEEEeecCCceeEEeeccC---CCCCchHHHHHHHHHHHhhHHHHHh---cceeeccCChhheeeccCCCeEe
Confidence            99999999999999999999998876   3568999999999999999999999   99999999999999999999999


Q ss_pred             EeecCcccccCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhc
Q 048419          477 GDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHL  556 (653)
Q Consensus       477 ~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~  556 (653)
                      +|+|||..+..+..  ....+||.+|||||++.+..|+...|-||+||+||||+.|+.||.........           
T Consensus       329 SDLGLAvei~~g~~--~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~-----------  395 (591)
T KOG0986|consen  329 SDLGLAVEIPEGKP--IRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKR-----------  395 (591)
T ss_pred             eccceEEecCCCCc--cccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhH-----------
Confidence            99999998765443  33458999999999999999999999999999999999999999865543211           


Q ss_pred             ccchhHhhhhcc----CcCCHHHHHHHHHHHHHcCCCCCCCCC-----CHHHHHH----------HHcCCCCCC---CCC
Q 048419          557 EGEITQAIDQTL----DYYDLAEAELVLNLGLFCSAPNPVYRP-----DMRRVVE----------FLLGDSSLP---PLP  614 (653)
Q Consensus       557 ~~~~~~~~d~~l----~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~----------~L~~~~~~p---~~p  614 (653)
                           +-+|.+.    ..++....+++..|....|+.||.+|-     .+.+|.+          +|+..+-.|   |.|
T Consensus       396 -----eEvdrr~~~~~~ey~~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~HpfFk~lnw~rleagml~PPfiPdp  470 (591)
T KOG0986|consen  396 -----EEVDRRTLEDPEEYSDKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEHPFFKDLNWRRLEAGMLEPPFIPDP  470 (591)
T ss_pred             -----HHHHHHHhcchhhcccccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhCcccccCCHhHHhccCCCCCCCCCc
Confidence                 1122222    233344567788888999999999996     4446654          344333333   334


Q ss_pred             CccccccccccCCcCCC------CCCcccccc
Q 048419          615 PDIHLKDTRNIMGFSDF------PNDSDFFNS  640 (653)
Q Consensus       615 ~~~~~~~~~~~~~~~~~------~~~~~~~~~  640 (653)
                      ...+.++.-.+.+||+.      ..|.+||.+
T Consensus       471 ~aVyakDv~DIeqFs~VKGV~ld~~D~~fy~~  502 (591)
T KOG0986|consen  471 GAVYAKDVLDIEQFSTVKGVKLDDTDTDFYKN  502 (591)
T ss_pred             cccchhhhhhhhhcccccceecccccHHHHHh
Confidence            44577888888888876      455677765

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=100.00  E-value=5.2e-36  Score=303.88  Aligned_cols=251  Identities=23%  Similarity=0.359  Sum_probs=204.2

Q ss_pred             CcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC--chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEec
Q 048419          331 GFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDY  408 (653)
Q Consensus       331 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~  408 (653)
                      +|...+.||+|+||.||+|....+|..+|+|.+...  .....+.+.+|++++++++|+|++++++.+...+..++|+||
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~   80 (257)
T cd08225           1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY   80 (257)
T ss_pred             CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence            477889999999999999999988999999998653  223456788999999999999999999999999999999999


Q ss_pred             cCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCC-cEEEEeecCcccccC
Q 048419          409 VPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYL-NAKLGDFGLAKIYEH  487 (653)
Q Consensus       409 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~-~~kl~DfGla~~~~~  487 (653)
                      +++++|.+++....   ...+++..+..++.|+++||.|||+   .+++|+||||+||++++++ .+||+|||.+.....
T Consensus        81 ~~~~~L~~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~lh~---~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~  154 (257)
T cd08225          81 CDGGDLMKRINRQR---GVLFSEDQILSWFVQISLGLKHIHD---RKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLND  154 (257)
T ss_pred             CCCCcHHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCCHHHEEEcCCCCeEEecccccchhccC
Confidence            99999999987643   2347899999999999999999999   8999999999999998885 469999999986643


Q ss_pred             CCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhc
Q 048419          488 GANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQT  567 (653)
Q Consensus       488 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~  567 (653)
                      .. .......|++.|+|||.+.+..++.++||||||++++||++|+.|+.......      ++....         ...
T Consensus       155 ~~-~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~------~~~~~~---------~~~  218 (257)
T cd08225         155 SM-ELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQ------LVLKIC---------QGY  218 (257)
T ss_pred             Cc-ccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHH------HHHHHh---------ccc
Confidence            22 12223458889999999988889999999999999999999999997543221      111111         111


Q ss_pred             cCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 048419          568 LDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEF  603 (653)
Q Consensus       568 l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  603 (653)
                      +..........+.+++.+||+.+|++||++.+++++
T Consensus       219 ~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~  254 (257)
T cd08225         219 FAPISPNFSRDLRSLISQLFKVSPRDRPSITSILKR  254 (257)
T ss_pred             CCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence            111111234568899999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=100.00  E-value=1.1e-35  Score=304.42  Aligned_cols=255  Identities=26%  Similarity=0.422  Sum_probs=201.0

Q ss_pred             CcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCch----------hhHHHHHHHHHHHhhcCCCceeeeeeeecccc
Q 048419          331 GFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQ----------QGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQD  400 (653)
Q Consensus       331 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~----------~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~  400 (653)
                      +|...+.||+|+||.||+|....+++.+|+|.++....          ...+.+.+|+..+++++|+|++++++++...+
T Consensus         2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   81 (272)
T cd06629           2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE   81 (272)
T ss_pred             ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence            35667899999999999999988899999998853211          12346788999999999999999999999999


Q ss_pred             eeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeec
Q 048419          401 ELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFG  480 (653)
Q Consensus       401 ~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG  480 (653)
                      ..++|+||+++++|.+++...     ..+++..+..++.||+.||.|||+   ++++|+||+|+||+++.++.+||+|||
T Consensus        82 ~~~lv~e~~~~~~L~~~l~~~-----~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~~~nil~~~~~~~~l~d~~  153 (272)
T cd06629          82 YLSIFLEYVPGGSIGSCLRTY-----GRFEEQLVRFFTEQVLEGLAYLHS---KGILHRDLKADNLLVDADGICKISDFG  153 (272)
T ss_pred             ceEEEEecCCCCcHHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHhh---CCeeecCCChhhEEEcCCCeEEEeecc
Confidence            999999999999999998764     348889999999999999999999   899999999999999999999999999


Q ss_pred             CcccccCCCCC-cccccccCCcccCccccccCC--CCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcc
Q 048419          481 LAKIYEHGANP-QTTHIVGTLGYLAPELTRTGK--ATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLE  557 (653)
Q Consensus       481 la~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~--~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~  557 (653)
                      +++........ ......++..|+|||.+....  ++.++|+||||++++||++|+.|+..........  +    ....
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~--~----~~~~  227 (272)
T cd06629         154 ISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMF--K----LGNK  227 (272)
T ss_pred             ccccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHH--H----hhcc
Confidence            99865432111 123346788999999987654  7889999999999999999999996543321110  0    0000


Q ss_pred             cchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 048419          558 GEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEF  603 (653)
Q Consensus       558 ~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  603 (653)
                      . ....+..   .........+.+++.+||+.+|.+||++.+|+++
T Consensus       228 ~-~~~~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  269 (272)
T cd06629         228 R-SAPPIPP---DVSMNLSPVALDFLNACFTINPDNRPTARELLQH  269 (272)
T ss_pred             c-cCCcCCc---cccccCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence            0 0000001   1111234678899999999999999999999876

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=100.00  E-value=1.2e-37  Score=292.61  Aligned_cols=256  Identities=24%  Similarity=0.350  Sum_probs=207.5

Q ss_pred             hhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC--chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEE
Q 048419          328 VTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLV  405 (653)
Q Consensus       328 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV  405 (653)
                      .++.|+..+.||+|.|+.||++.+..+|+.+|+|.+...  +..+.+++.+|+.+-+.|+|||||++...+.+....|+|
T Consensus         9 f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylv   88 (355)
T KOG0033|consen    9 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV   88 (355)
T ss_pred             cchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEE
Confidence            346677788999999999999999999999999988532  445778899999999999999999999999999999999


Q ss_pred             EeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcC---CCcEEEEeecCc
Q 048419          406 YDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDT---YLNAKLGDFGLA  482 (653)
Q Consensus       406 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~DfGla  482 (653)
                      +|+|.|++|..-+-.+     ...++...-...+||+++|.|+|.   ++|||||+||.|++|-+   .--+||+|||+|
T Consensus        89 Fe~m~G~dl~~eIV~R-----~~ySEa~aSH~~rQiLeal~yCH~---n~IvHRDvkP~nllLASK~~~A~vKL~~FGvA  160 (355)
T KOG0033|consen   89 FDLVTGGELFEDIVAR-----EFYSEADASHCIQQILEALAYCHS---NGIVHRDLKPENLLLASKAKGAAVKLADFGLA  160 (355)
T ss_pred             EecccchHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHh---cCceeccCChhheeeeeccCCCceeecccceE
Confidence            9999999997655443     347778888899999999999999   99999999999999943   345899999999


Q ss_pred             ccccCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhH
Q 048419          483 KIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQ  562 (653)
Q Consensus       483 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~  562 (653)
                      ..+.  ........+||++|||||+++...++..+|||+.||+||-|+.|+.||.+.+..   .+.+.+..    +... 
T Consensus       161 i~l~--~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~---rlye~I~~----g~yd-  230 (355)
T KOG0033|consen  161 IEVN--DGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH---RLYEQIKA----GAYD-  230 (355)
T ss_pred             EEeC--CccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHH---HHHHHHhc----cccC-
Confidence            9876  233445678999999999999999999999999999999999999999874432   12211111    1000 


Q ss_pred             hhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          563 AIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       563 ~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                      .-.+.+    ....+...+|+.+||..||.+|.|+.|.+.+-+
T Consensus       231 ~~~~~w----~~is~~Ak~LvrrML~~dP~kRIta~EAL~HpW  269 (355)
T KOG0033|consen  231 YPSPEW----DTVTPEAKSLIRRMLTVNPKKRITADEALKHPW  269 (355)
T ss_pred             CCCccc----CcCCHHHHHHHHHHhccChhhhccHHHHhCCch
Confidence            000001    112467889999999999999999999887543

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=2.2e-35  Score=305.16  Aligned_cols=263  Identities=24%  Similarity=0.326  Sum_probs=206.2

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc-hhhHHHHHHHHHHHhhcCCCceeeeeeeeccc--ceeEEEE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS-QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQ--DELLLVY  406 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~--~~~~lV~  406 (653)
                      ++|...+.||.|++|.||++.+..+++.+|+|.+.... ......+.+|++.+++++|+||++++++|.+.  +.+++||
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~   80 (287)
T cd06621           1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM   80 (287)
T ss_pred             CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence            46888999999999999999998889999999987543 34567789999999999999999999988554  4689999


Q ss_pred             eccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccccc
Q 048419          407 DYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE  486 (653)
Q Consensus       407 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~  486 (653)
                      ||+++++|.+++..... ....+++..+..++.||++||.|||+   .+++|+||+|+||++++++.++|+|||++....
T Consensus        81 e~~~~~~L~~~l~~~~~-~~~~l~~~~~~~i~~~i~~~L~~lH~---~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~  156 (287)
T cd06621          81 EYCEGGSLDSIYKKVKK-RGGRIGEKVLGKIAESVLKGLSYLHS---RKIIHRDIKPSNILLTRKGQVKLCDFGVSGELV  156 (287)
T ss_pred             EecCCCCHHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEecCCeEEEeecccccccc
Confidence            99999999998764322 13457888999999999999999999   899999999999999999999999999987543


Q ss_pred             CCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhh--hhHHHHHHHHHhhhcccchhHhh
Q 048419          487 HGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKA--AAELLLVDWVKELHLEGEITQAI  564 (653)
Q Consensus       487 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~  564 (653)
                      ...   .....++..|+|||.+.+..++.++|||||||++|||++|+.|+.....  .....+..++....    .... 
T Consensus       157 ~~~---~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~-  228 (287)
T cd06621         157 NSL---AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMP----NPEL-  228 (287)
T ss_pred             ccc---cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCC----chhh-
Confidence            321   1234578899999999988999999999999999999999999976522  11111222222110    0000 


Q ss_pred             hhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          565 DQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       565 d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                      .... .......+.+.+++.+||+.+|.+|||+.|++++-.
T Consensus       229 ~~~~-~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~  268 (287)
T cd06621         229 KDEP-GNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPW  268 (287)
T ss_pred             ccCC-CCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhCcc
Confidence            0000 000123467899999999999999999999998654

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=100.00  E-value=8e-36  Score=307.53  Aligned_cols=263  Identities=25%  Similarity=0.330  Sum_probs=201.2

Q ss_pred             CcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc--hhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEec
Q 048419          331 GFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS--QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDY  408 (653)
Q Consensus       331 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~  408 (653)
                      +|+..+.||.|++|.||+|+...+++.||||++....  ....+.+.+|++++++++|+||+++++++.+.+..++||||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (284)
T cd07860           1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF   80 (284)
T ss_pred             CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence            4788899999999999999998889999999986432  22345788999999999999999999999999999999999


Q ss_pred             cCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCC
Q 048419          409 VPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHG  488 (653)
Q Consensus       409 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~  488 (653)
                      ++ ++|.+++....   ...+++.+++.++.|++.||+|||+   ++++|+||+|+||+++.++.+||+|||++......
T Consensus        81 ~~-~~l~~~~~~~~---~~~l~~~~~~~~~~~i~~~l~~lh~---~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~  153 (284)
T cd07860          81 LH-QDLKKFMDASP---LSGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP  153 (284)
T ss_pred             cc-cCHHHHHHhCC---CCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEEeeccchhhcccC
Confidence            96 68988886543   3458899999999999999999999   89999999999999999999999999998765432


Q ss_pred             CCCcccccccCCcccCccccccCC-CCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhccc-c-------
Q 048419          489 ANPQTTHIVGTLGYLAPELTRTGK-ATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEG-E-------  559 (653)
Q Consensus       489 ~~~~~~~~~gt~~y~aPE~~~~~~-~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~-~-------  559 (653)
                      .. ......++..|+|||.+.+.. ++.++|||||||++|||+||+.||........  +........... .       
T Consensus       154 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~  230 (284)
T cd07860         154 VR-TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ--LFRIFRTLGTPDEVVWPGVTS  230 (284)
T ss_pred             cc-ccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHH--HHHHHHHhCCCChhhhhhhhH
Confidence            21 122335678999999887654 58899999999999999999999975443221  111111100000 0       


Q ss_pred             hhH-------hhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 048419          560 ITQ-------AIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEF  603 (653)
Q Consensus       560 ~~~-------~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  603 (653)
                      +.+       .....+..........+.+++.+||+.||.+||++++++++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~  281 (284)
T cd07860         231 LPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAH  281 (284)
T ss_pred             HHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcC
Confidence            000       00000000001123567899999999999999999999865

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=100.00  E-value=1.6e-35  Score=307.63  Aligned_cols=264  Identities=25%  Similarity=0.318  Sum_probs=202.4

Q ss_pred             CcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchh-----hHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEE
Q 048419          331 GFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQ-----GMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLV  405 (653)
Q Consensus       331 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV  405 (653)
                      +|...+.||+|++|.||+|....+++.||||++......     ....+..|++.+++++|+||+++++++.+.+..++|
T Consensus         1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv   80 (298)
T cd07841           1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV   80 (298)
T ss_pred             CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence            467788999999999999999888999999999755322     345677899999999999999999999999999999


Q ss_pred             EeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccc
Q 048419          406 YDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIY  485 (653)
Q Consensus       406 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~  485 (653)
                      |||+ +++|.+++....    ..+++..++.++.||++||.|||+   ++++|+||||+||+++.++.+||+|||+++..
T Consensus        81 ~e~~-~~~L~~~i~~~~----~~~~~~~~~~~~~qi~~al~~lH~---~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~  152 (298)
T cd07841          81 FEFM-ETDLEKVIKDKS----IVLTPADIKSYMLMTLRGLEYLHS---NWILHRDLKPNNLLIASDGVLKLADFGLARSF  152 (298)
T ss_pred             Eccc-CCCHHHHHhccC----CCCCHHHHHHHHHHHHHHHHHHHh---CCeeecCCChhhEEEcCCCCEEEccceeeeec
Confidence            9999 899999996543    258999999999999999999999   89999999999999999999999999999876


Q ss_pred             cCCCCCcccccccCCcccCcccccc-CCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhc--ccc---
Q 048419          486 EHGANPQTTHIVGTLGYLAPELTRT-GKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHL--EGE---  559 (653)
Q Consensus       486 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~--~~~---  559 (653)
                      ..... ......++..|+|||.+.+ ..++.++|||||||+++||++|..++.........  .........  ...   
T Consensus       153 ~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~  229 (298)
T cd07841         153 GSPNR-KMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQL--GKIFEALGTPTEENWPG  229 (298)
T ss_pred             cCCCc-cccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHH--HHHHHHcCCCchhhhhh
Confidence            44321 2222356788999998854 45788999999999999999998777654332211  111110000  000   


Q ss_pred             ---hhHhhhhcc------CcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          560 ---ITQAIDQTL------DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       560 ---~~~~~d~~l------~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                         .........      ..........+.+++.+||+.+|.+||++.|++++=.
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~~~  284 (298)
T cd07841         230 VTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPY  284 (298)
T ss_pred             cccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhCcc
Confidence               000000000      0011123467889999999999999999999999643

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=100.00  E-value=1.4e-35  Score=306.93  Aligned_cols=247  Identities=26%  Similarity=0.317  Sum_probs=204.3

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC---chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN---SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVY  406 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  406 (653)
                      ++|...+.||+|+||.||++.+..+++.+|+|++...   .....+.+.+|++++++++||||+++++++...+..++||
T Consensus         1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   80 (290)
T cd05580           1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM   80 (290)
T ss_pred             CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence            4688899999999999999999988999999998643   2234567889999999999999999999999999999999


Q ss_pred             eccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccccc
Q 048419          407 DYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE  486 (653)
Q Consensus       407 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~  486 (653)
                      ||+++++|.+++...     ..+++..+..++.|++.||.|||+   ++++|+||+|+||+++.++.+||+|||++....
T Consensus        81 e~~~~~~L~~~~~~~-----~~l~~~~~~~~~~qil~~l~~lH~---~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~  152 (290)
T cd05580          81 EYVPGGELFSHLRKS-----GRFPEPVARFYAAQVVLALEYLHS---LDIVYRDLKPENLLLDSDGYIKITDFGFAKRVK  152 (290)
T ss_pred             ecCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEECCCCCEEEeeCCCccccC
Confidence            999999999998664     348899999999999999999999   999999999999999999999999999998764


Q ss_pred             CCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhh
Q 048419          487 HGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQ  566 (653)
Q Consensus       487 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  566 (653)
                      ..    .....+++.|+|||.+.+...+.++||||||+++|||++|+.||.......   ....+.    .+..      
T Consensus       153 ~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~---~~~~~~----~~~~------  215 (290)
T cd05580         153 GR----TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQ---IYEKIL----EGKV------  215 (290)
T ss_pred             CC----CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHh----cCCc------
Confidence            43    233468899999999988888999999999999999999999997544211   111100    1110      


Q ss_pred             ccCcCCHHHHHHHHHHHHHcCCCCCCCCC-----CHHHHHHHH
Q 048419          567 TLDYYDLAEAELVLNLGLFCSAPNPVYRP-----DMRRVVEFL  604 (653)
Q Consensus       567 ~l~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~L  604 (653)
                         ..+......+.+++.+||+.||.+||     +++|++++-
T Consensus       216 ---~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~  255 (290)
T cd05580         216 ---RFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHP  255 (290)
T ss_pred             ---cCCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcCc
Confidence               01111246788999999999999999     788887654

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=100.00  E-value=2.3e-35  Score=305.43  Aligned_cols=267  Identities=21%  Similarity=0.305  Sum_probs=200.5

Q ss_pred             hhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCch-hhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEE
Q 048419          328 VTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQ-QGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVY  406 (653)
Q Consensus       328 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  406 (653)
                      ++++|...+.||+|+||.||+|....++..||+|++..... .....+.+|+..+++++|+||+++++++...+..++|+
T Consensus         3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~   82 (291)
T cd07870           3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVF   82 (291)
T ss_pred             ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEE
Confidence            46789999999999999999999988899999999865432 23346778999999999999999999999999999999


Q ss_pred             eccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccccc
Q 048419          407 DYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE  486 (653)
Q Consensus       407 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~  486 (653)
                      ||+. ++|.+++....    ..+++.++..++.|++.||.|||+   .+++|+||||+||+++.++++||+|||+++...
T Consensus        83 e~~~-~~l~~~~~~~~----~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~  154 (291)
T cd07870          83 EYMH-TDLAQYMIQHP----GGLHPYNVRLFMFQLLRGLAYIHG---QHILHRDLKPQNLLISYLGELKLADFGLARAKS  154 (291)
T ss_pred             eccc-CCHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChHHEEEcCCCcEEEeccccccccC
Confidence            9996 67777765432    347788889999999999999999   899999999999999999999999999987543


Q ss_pred             CCCCCcccccccCCcccCccccccC-CCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccc------
Q 048419          487 HGANPQTTHIVGTLGYLAPELTRTG-KATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGE------  559 (653)
Q Consensus       487 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~------  559 (653)
                      ... .......++..|+|||.+.+. .++.++|||||||++|||++|+.||.......+.....|.........      
T Consensus       155 ~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (291)
T cd07870         155 IPS-QTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVS  233 (291)
T ss_pred             CCC-CCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhh
Confidence            221 112233568899999998754 578899999999999999999999975543221111111000000000      


Q ss_pred             -hhHhhhh--------ccC--cCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 048419          560 -ITQAIDQ--------TLD--YYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEF  603 (653)
Q Consensus       560 -~~~~~d~--------~l~--~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  603 (653)
                       +......        .+.  .........+.+++.+|++.||.+|||+.|++.+
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h  288 (291)
T cd07870         234 KLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLH  288 (291)
T ss_pred             hcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcC
Confidence             0000000        000  0001124567899999999999999999999864

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=100.00  E-value=9.3e-36  Score=310.46  Aligned_cols=254  Identities=26%  Similarity=0.406  Sum_probs=200.4

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCc----EEEEEEeccCc-hhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGL----EVAIKRIGHNS-QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLL  404 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  404 (653)
                      ++|+..+.||+|+||.||+|.+..++.    .+|+|.+.... .....++.+|+.++++++|+||++++++|... ..++
T Consensus         7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~~   85 (303)
T cd05110           7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQL   85 (303)
T ss_pred             hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Ccee
Confidence            456778899999999999999866665    57889886543 23345788999999999999999999999764 4679


Q ss_pred             EEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccc
Q 048419          405 VYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKI  484 (653)
Q Consensus       405 V~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~  484 (653)
                      ++||+++|+|.+++....    ..+++..++.++.|++.||.|||+   ++|+|+||||+||+++.++.+||+|||+++.
T Consensus        86 v~e~~~~g~l~~~~~~~~----~~~~~~~~~~~~~qi~~~L~~LH~---~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~  158 (303)
T cd05110          86 VTQLMPHGCLLDYVHEHK----DNIGSQLLLNWCVQIAKGMMYLEE---RRLVHRDLAARNVLVKSPNHVKITDFGLARL  158 (303)
T ss_pred             eehhcCCCCHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHhh---cCeeccccccceeeecCCCceEEcccccccc
Confidence            999999999999987543    347889999999999999999999   8999999999999999999999999999986


Q ss_pred             ccCCCCC-cccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhhcccchhH
Q 048419          485 YEHGANP-QTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELHLEGEITQ  562 (653)
Q Consensus       485 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~  562 (653)
                      ....... ......++..|+|||.+.+..++.++|||||||++|||++ |+.|+.......   ..+++...    .   
T Consensus       159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~---~~~~~~~~----~---  228 (303)
T cd05110         159 LEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTRE---IPDLLEKG----E---  228 (303)
T ss_pred             ccCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHH---HHHHHHCC----C---
Confidence            6432221 1222345678999999988889999999999999999997 899987543221   11221111    0   


Q ss_pred             hhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          563 AIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       563 ~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                          .+. ........+.+++..||..+|++||++.++++.|..
T Consensus       229 ----~~~-~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~  267 (303)
T cd05110         229 ----RLP-QPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSR  267 (303)
T ss_pred             ----CCC-CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence                000 001123567899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=100.00  E-value=7.6e-36  Score=313.02  Aligned_cols=199  Identities=25%  Similarity=0.365  Sum_probs=161.5

Q ss_pred             ceeeeeeCcEEEEEEEeC--CCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecc--cceeEEEEeccC
Q 048419          335 QNLVGSGGFGRVYRGLMP--SLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRK--QDELLLVYDYVP  410 (653)
Q Consensus       335 ~~~LG~G~fg~Vy~~~~~--~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~--~~~~~lV~E~~~  410 (653)
                      .++||+|+||.||+|...  .+++.||+|.+....  ....+.+|+.++++++||||+++++++..  ....++++||+.
T Consensus         6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~   83 (317)
T cd07868           6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE   83 (317)
T ss_pred             ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC--CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC
Confidence            468999999999999965  356889999986442  23456789999999999999999998854  456899999995


Q ss_pred             CCCchhhhhccccc----ccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEE----cCCCcEEEEeecCc
Q 048419          411 NGSLDKLLFDKDHK----LRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILL----DTYLNAKLGDFGLA  482 (653)
Q Consensus       411 ~gsL~~~l~~~~~~----~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll----~~~~~~kl~DfGla  482 (653)
                       ++|.+++......    ....+++..+..++.||+.||.|||+   ++|+||||||+|||+    +.++.+||+|||++
T Consensus        84 -~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~---~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a  159 (317)
T cd07868          84 -HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHA---NWVLHRDLKPANILVMGEGPERGRVKIADMGFA  159 (317)
T ss_pred             -CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHh---CCEEcCCCCHHHEEEecCCCCcCcEEEeecCce
Confidence             4888777543211    12358889999999999999999999   899999999999999    45678999999999


Q ss_pred             ccccCCCC--CcccccccCCcccCccccccC-CCCCccceeehHHHHHHHHhCCCCCChh
Q 048419          483 KIYEHGAN--PQTTHIVGTLGYLAPELTRTG-KATTSTDVYSYGILMLEVACGRRSIEPQ  539 (653)
Q Consensus       483 ~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~-~~~~ksDV~s~Gvvl~elltG~~p~~~~  539 (653)
                      +.......  .......||+.|+|||++.+. .++.++||||+||++|||++|+.||...
T Consensus       160 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~  219 (317)
T cd07868         160 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR  219 (317)
T ss_pred             eccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCC
Confidence            87643321  122345789999999998764 5889999999999999999999999643

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=100.00  E-value=1.3e-35  Score=300.99  Aligned_cols=248  Identities=29%  Similarity=0.434  Sum_probs=198.8

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEecc
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYV  409 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~  409 (653)
                      ++|...+.||+|+||.||++..  .++.||+|.+....  ..+.+.+|+.++++++|+|++++++++... ..++||||+
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~--~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~   80 (254)
T cd05083           6 QKLTLGEIIGEGEFGAVLQGEY--TGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMELM   80 (254)
T ss_pred             HHceeeeeeccCCCCceEeccc--CCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECC
Confidence            3577889999999999999975  47889999986432  346788999999999999999999998654 479999999


Q ss_pred             CCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCC
Q 048419          410 PNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGA  489 (653)
Q Consensus       410 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~  489 (653)
                      ++++|.+++....   ...+++..++.++.|++.||.|||+   .+++||||||+||+++.++.+||+|||++.......
T Consensus        81 ~~~~L~~~l~~~~---~~~~~~~~~~~~~~qi~~al~~lH~---~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~  154 (254)
T cd05083          81 SKGNLVNFLRTRG---RALVSVIQLLQFSLDVAEGMEYLES---KKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGV  154 (254)
T ss_pred             CCCCHHHHHHhcC---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccccCcceEEEcCCCcEEECCCccceeccccC
Confidence            9999999997653   2357899999999999999999999   899999999999999999999999999987543221


Q ss_pred             CCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhcc
Q 048419          490 NPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTL  568 (653)
Q Consensus       490 ~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l  568 (653)
                          .....+..|+|||.+.+..++.++|||||||++|||++ |+.||.......   +...+..    +...       
T Consensus       155 ----~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~---~~~~~~~----~~~~-------  216 (254)
T cd05083         155 ----DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKE---VKECVEK----GYRM-------  216 (254)
T ss_pred             ----CCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHH---HHHHHhC----CCCC-------
Confidence                12234568999999988899999999999999999998 899887544321   1111111    1000       


Q ss_pred             CcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcCC
Q 048419          569 DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLGD  607 (653)
Q Consensus       569 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  607 (653)
                       ......+..+.+++.+||+.+|.+||++.++++.|+.+
T Consensus       217 -~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~  254 (254)
T cd05083         217 -EPPEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEKE  254 (254)
T ss_pred             -CCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHccC
Confidence             01112346788999999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=100.00  E-value=1.6e-35  Score=305.12  Aligned_cols=255  Identities=26%  Similarity=0.320  Sum_probs=197.4

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc-hhhHHHHHHHHHH-HhhcCCCceeeeeeeecccceeEEEEe
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS-QQGMKEFVAEIMS-MGRLRHRNLVQLHGWCRKQDELLLVYD  407 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~-l~~l~H~niv~l~g~~~~~~~~~lV~E  407 (653)
                      ++|+..+.||+|+||.||++.+..+|+.||+|++.... .+....+..|+.. ++.++|+|++++++++...+..+++||
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e   80 (283)
T cd06617           1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME   80 (283)
T ss_pred             CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence            46888999999999999999999899999999986542 2334455666664 566789999999999999999999999


Q ss_pred             ccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCC-CeEecCCCCCcEEEcCCCcEEEEeecCccccc
Q 048419          408 YVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQ-RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE  486 (653)
Q Consensus       408 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~-~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~  486 (653)
                      |++ |+|.+++...... ...+++..++.++.||+.||+|||+   + +++||||||+||+++.++.+||+|||++....
T Consensus        81 ~~~-~~l~~~l~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~---~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~  155 (283)
T cd06617          81 VMD-TSLDKFYKKVYDK-GLTIPEDILGKIAVSIVKALEYLHS---KLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLV  155 (283)
T ss_pred             hhc-ccHHHHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHhh---cCCeecCCCCHHHEEECCCCCEEEeecccccccc
Confidence            996 6888887653221 3568999999999999999999998   6 89999999999999999999999999998653


Q ss_pred             CCCCCcccccccCCcccCcccccc----CCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhH
Q 048419          487 HGANPQTTHIVGTLGYLAPELTRT----GKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQ  562 (653)
Q Consensus       487 ~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~  562 (653)
                      ...  ......++..|+|||.+.+    ..++.++|+|||||++|||++|+.|+.......+ .+.....     +    
T Consensus       156 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~-~~~~~~~-----~----  223 (283)
T cd06617         156 DSV--AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQ-QLKQVVE-----E----  223 (283)
T ss_pred             ccc--ccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHH-HHHHHHh-----c----
Confidence            321  1122467889999998864    3468899999999999999999999964322111 0100000     0    


Q ss_pred             hhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          563 AIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       563 ~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                       ..+.+  ........+.+++.+||+.+|.+||++.+++++-
T Consensus       224 -~~~~~--~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~  262 (283)
T cd06617         224 -PSPQL--PAEKFSPEFQDFVNKCLKKNYKERPNYPELLQHP  262 (283)
T ss_pred             -CCCCC--CccccCHHHHHHHHHHccCChhhCcCHHHHhcCc
Confidence             00111  0111346688999999999999999999999743

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=100.00  E-value=1.9e-35  Score=301.58  Aligned_cols=251  Identities=24%  Similarity=0.375  Sum_probs=200.3

Q ss_pred             CcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc------hhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEE
Q 048419          331 GFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS------QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLL  404 (653)
Q Consensus       331 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~------~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  404 (653)
                      +|...+.||+|+||.||+|... ++..+|||.+....      ....+.+.+|++.+++++|+||++++++|.+.+..++
T Consensus         1 ~~~~~~~ig~g~~~~v~~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l   79 (265)
T cd06631           1 EWTKGEVLGKGAYGTVYCGLTN-QGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISI   79 (265)
T ss_pred             CccccceEeccCCeEEEEEEEc-CCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEE
Confidence            3667889999999999999874 58899999886432      2234568899999999999999999999999999999


Q ss_pred             EEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccc
Q 048419          405 VYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKI  484 (653)
Q Consensus       405 V~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~  484 (653)
                      ++||+++++|.+++....     .+++..+..++.|++.||.|||+   .+++|+||+|+||++++++.+||+|||++..
T Consensus        80 v~e~~~~~~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~  151 (265)
T cd06631          80 FMEFVPGGSISSILNRFG-----PLPEPVFCKYTKQILDGVAYLHN---NCVVHRDIKGNNVMLMPNGIIKLIDFGCARR  151 (265)
T ss_pred             EEecCCCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHh---CCcccCCcCHHhEEECCCCeEEeccchhhHh
Confidence            999999999999996542     47899999999999999999999   8999999999999999999999999999876


Q ss_pred             ccCCC-----CCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccc
Q 048419          485 YEHGA-----NPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGE  559 (653)
Q Consensus       485 ~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~  559 (653)
                      .....     ........++..|+|||.+.+..++.++|||||||+++||++|+.||..........  ....   ..+.
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~--~~~~---~~~~  226 (265)
T cd06631         152 LAWVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMF--YIGA---HRGL  226 (265)
T ss_pred             hhhccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHH--Hhhh---ccCC
Confidence            43211     111223468899999999998889999999999999999999999997543321110  0000   0000


Q ss_pred             hhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 048419          560 ITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEF  603 (653)
Q Consensus       560 ~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  603 (653)
                      .     +   ..+......+.+++.+||+.+|.+||++.|++++
T Consensus       227 ~-----~---~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~  262 (265)
T cd06631         227 M-----P---RLPDSFSAAAIDFVTSCLTRDQHERPSALQLLRH  262 (265)
T ss_pred             C-----C---CCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence            0     1   1111234668899999999999999999999863

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=100.00  E-value=1.4e-35  Score=309.43  Aligned_cols=256  Identities=23%  Similarity=0.288  Sum_probs=203.3

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc---hhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS---QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVY  406 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  406 (653)
                      ++|+..+.||+|+||.||++.....++.|++|.+....   ....+.+.+|+.+++.++|+||+++++.+...+..++||
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (305)
T cd05609           1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM   80 (305)
T ss_pred             CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence            46888999999999999999999989999999986543   234567889999999999999999999999999999999


Q ss_pred             eccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccccc
Q 048419          407 DYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE  486 (653)
Q Consensus       407 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~  486 (653)
                      ||+++++|.+++...     ..+++..+..++.|++.||.|||+   ++++|+||||+||+++.++.+||+|||+++...
T Consensus        81 e~~~g~~L~~~l~~~-----~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~  152 (305)
T cd05609          81 EYVEGGDCATLLKNI-----GALPVDMARMYFAETVLALEYLHN---YGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGL  152 (305)
T ss_pred             ecCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCchHHEEECCCCCEEEeeCCCccccC
Confidence            999999999999654     348899999999999999999999   899999999999999999999999999987421


Q ss_pred             CCCC--------------CcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHH
Q 048419          487 HGAN--------------PQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVK  552 (653)
Q Consensus       487 ~~~~--------------~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~  552 (653)
                      ....              .......++..|+|||.+.+..++.++|||||||++|||++|+.||.......  .+.....
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~--~~~~~~~  230 (305)
T cd05609         153 MSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEE--LFGQVIS  230 (305)
T ss_pred             cCccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHh
Confidence            1100              01112357889999999988889999999999999999999999997543321  1111000


Q ss_pred             hhhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          553 ELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       553 ~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                           +...   .+.   ........+.+++.+||+.+|++||++.++.+.|+.
T Consensus       231 -----~~~~---~~~---~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~  273 (305)
T cd05609         231 -----DDIE---WPE---GDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQH  273 (305)
T ss_pred             -----cccC---CCC---ccccCCHHHHHHHHHHhccChhhccCccCHHHHHhC
Confidence                 0000   000   001234568899999999999999997666666654

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=100.00  E-value=1.8e-35  Score=306.81  Aligned_cols=263  Identities=25%  Similarity=0.369  Sum_probs=211.7

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEecc
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYV  409 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~  409 (653)
                      ++|...+.||+|+||.||++....++..||+|.+........+.+.+|+.++++++|||++++++.|...+..++|+||+
T Consensus        19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~   98 (293)
T cd06647          19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYL   98 (293)
T ss_pred             hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecC
Confidence            67888999999999999999988788999999987655555678899999999999999999999999999999999999


Q ss_pred             CCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCC
Q 048419          410 PNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGA  489 (653)
Q Consensus       410 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~  489 (653)
                      ++++|.+++.+.      .+++.++..++.|++.||.|||+   ++++|+||||+||+++.++.+||+|||++.......
T Consensus        99 ~~~~L~~~~~~~------~l~~~~~~~i~~~l~~al~~LH~---~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~  169 (293)
T cd06647          99 AGGSLTDVVTET------CMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ  169 (293)
T ss_pred             CCCcHHHHHhhc------CCCHHHHHHHHHHHHHHHHHHHh---CCEeeccCCHHHEEEcCCCCEEEccCcceecccccc
Confidence            999999998643      37888999999999999999999   899999999999999999999999999987654332


Q ss_pred             CCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhccC
Q 048419          490 NPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLD  569 (653)
Q Consensus       490 ~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~  569 (653)
                      . ......+++.|+|||.+....++.++||||||+++|||++|+.||...........      ....+.      +.. 
T Consensus       170 ~-~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~------~~~~~~------~~~-  235 (293)
T cd06647         170 S-KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYL------IATNGT------PEL-  235 (293)
T ss_pred             c-ccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheee------hhcCCC------CCC-
Confidence            2 22234688899999999888899999999999999999999999976543221100      000000      000 


Q ss_pred             cCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH--cCCCCCCCCCC
Q 048419          570 YYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL--LGDSSLPPLPP  615 (653)
Q Consensus       570 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L--~~~~~~p~~p~  615 (653)
                      .........+.+++.+||+.+|.+||++.+++.+-  ....++-.+||
T Consensus       236 ~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h~~~~~~~~~~~~~~  283 (293)
T cd06647         236 QNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHPFLKIAKPLSSLTP  283 (293)
T ss_pred             CCccccCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhcCcccccccc
Confidence            01112345688999999999999999999999863  44444444444

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=9.2e-36  Score=304.87  Aligned_cols=258  Identities=27%  Similarity=0.341  Sum_probs=204.4

Q ss_pred             HhhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhc-CCCceeeeeeeecccc-----
Q 048419          327 SVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRL-RHRNLVQLHGWCRKQD-----  400 (653)
Q Consensus       327 ~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~-----  400 (653)
                      ..+++|+..+.||+|++|.||+|....+++.+++|.+..... ..+.+.+|+.+++++ +|+||+++++++....     
T Consensus         3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~   81 (275)
T cd06608           3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGND   81 (275)
T ss_pred             CchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcc
Confidence            457889999999999999999999988899999999865543 346789999999999 6999999999996644     


Q ss_pred             -eeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEee
Q 048419          401 -ELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDF  479 (653)
Q Consensus       401 -~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df  479 (653)
                       .+++||||+++++|.+++..... ....+++..++.++.|++.||.|||+   .+++|+||+|+||++++++.+||+||
T Consensus        82 ~~~~lv~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~~ql~~al~~lH~---~~i~H~~l~p~ni~~~~~~~~~l~d~  157 (275)
T cd06608          82 DQLWLVMELCGGGSVTDLVKGLRK-KGKRLKEEWIAYILRETLRGLAYLHE---NKVIHRDIKGQNILLTKNAEVKLVDF  157 (275)
T ss_pred             eEEEEEEEcCCCCcHHHHHHHHhh-cCCCCCHHHHHHHHHHHHHHHHHHhc---CCcccCCCCHHHEEEccCCeEEECCC
Confidence             48999999999999998865321 13468899999999999999999999   89999999999999999999999999


Q ss_pred             cCcccccCCCCCcccccccCCcccCcccccc-----CCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhh
Q 048419          480 GLAKIYEHGANPQTTHIVGTLGYLAPELTRT-----GKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKEL  554 (653)
Q Consensus       480 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~  554 (653)
                      |++....... .......++..|+|||.+..     ..++.++|||||||+++||++|+.||........  +....   
T Consensus       158 ~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~--~~~~~---  231 (275)
T cd06608         158 GVSAQLDSTL-GRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRA--LFKIP---  231 (275)
T ss_pred             ccceecccch-hhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHH--HHHhh---
Confidence            9987654322 22233468889999998753     3467899999999999999999999975432211  11100   


Q ss_pred             hcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 048419          555 HLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEF  603 (653)
Q Consensus       555 ~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  603 (653)
                        ...     .+.+ .........+.+++.+||..||.+|||+.+++++
T Consensus       232 --~~~-----~~~~-~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~  272 (275)
T cd06608         232 --RNP-----PPTL-KSPENWSKKFNDFISECLIKNYEQRPFMEELLEH  272 (275)
T ss_pred             --ccC-----CCCC-CchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence              000     0111 1111234678899999999999999999999874

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=100.00  E-value=7.5e-36  Score=310.29  Aligned_cols=247  Identities=23%  Similarity=0.343  Sum_probs=201.3

Q ss_pred             ceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEeccCCCCc
Q 048419          335 QNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSL  414 (653)
Q Consensus       335 ~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL  414 (653)
                      ...||+|+||.||++....++..||+|.+........+.+.+|+..++.++|||++++++++...+..++|+||+++++|
T Consensus        26 ~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~L  105 (297)
T cd06659          26 YIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGAL  105 (297)
T ss_pred             hhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCCH
Confidence            45799999999999999888999999999765555567788999999999999999999999999999999999999999


Q ss_pred             hhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCCCCccc
Q 048419          415 DKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTT  494 (653)
Q Consensus       415 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~  494 (653)
                      ..++..      ..+++.+++.++.|++.||.|||+   .+++|+||||+||+++.++.+||+|||++....... ....
T Consensus       106 ~~~~~~------~~~~~~~~~~~~~qi~~~L~~LH~---~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~-~~~~  175 (297)
T cd06659         106 TDIVSQ------TRLNEEQIATVCESVLQALCYLHS---QGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV-PKRK  175 (297)
T ss_pred             HHHHhh------cCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHeEEccCCcEEEeechhHhhccccc-cccc
Confidence            987743      237899999999999999999999   899999999999999999999999999987554322 1223


Q ss_pred             ccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhccCcCCHH
Q 048419          495 HIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYYDLA  574 (653)
Q Consensus       495 ~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~  574 (653)
                      ...++..|+|||.+.+..++.++|||||||+++||++|+.||.........   ..+...    .     .... .....
T Consensus       176 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~---~~~~~~----~-----~~~~-~~~~~  242 (297)
T cd06659         176 SLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAM---KRLRDS----P-----PPKL-KNAHK  242 (297)
T ss_pred             ceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH---HHHhcc----C-----CCCc-cccCC
Confidence            356889999999999888999999999999999999999999754432211   111110    0     0000 00011


Q ss_pred             HHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          575 EAELVLNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       575 ~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                      ....+.+++.+||+.+|.+||++.+++++-
T Consensus       243 ~~~~l~~~i~~~l~~~P~~Rps~~~ll~~~  272 (297)
T cd06659         243 ISPVLRDFLERMLTREPQERATAQELLDHP  272 (297)
T ss_pred             CCHHHHHHHHHHhcCCcccCcCHHHHhhCh
Confidence            235678999999999999999999999954

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=100.00  E-value=3e-35  Score=302.36  Aligned_cols=248  Identities=25%  Similarity=0.381  Sum_probs=202.9

Q ss_pred             cCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc-hhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEeccC
Q 048419          332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS-QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVP  410 (653)
Q Consensus       332 f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~  410 (653)
                      |+..+.||+|+||.||+|....++..+|||.+.... ....+.+.+|+..+++++|+||+++++++...+..++||||++
T Consensus         6 ~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~   85 (277)
T cd06641           6 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLG   85 (277)
T ss_pred             hhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeCC
Confidence            566889999999999999998889999999986442 3445678899999999999999999999999999999999999


Q ss_pred             CCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCCC
Q 048419          411 NGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGAN  490 (653)
Q Consensus       411 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~  490 (653)
                      +++|.+++...      .+++..+..++.|++.++.|||+   .+++|+||+|+||+++.++.++|+|||++....... 
T Consensus        86 ~~~l~~~i~~~------~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~-  155 (277)
T cd06641          86 GGSALDLLEPG------PLDETQIATILREILKGLDYLHS---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ-  155 (277)
T ss_pred             CCcHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHcc---CCeecCCCCHHhEEECCCCCEEEeecccceecccch-
Confidence            99999998542      37899999999999999999999   999999999999999999999999999987654321 


Q ss_pred             CcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhccCc
Q 048419          491 PQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDY  570 (653)
Q Consensus       491 ~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~  570 (653)
                      .......++..|+|||.+.+..++.++|+|||||+++||++|..|+.......   ....+.    ...        ...
T Consensus       156 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~---~~~~~~----~~~--------~~~  220 (277)
T cd06641         156 IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMK---VLFLIP----KNN--------PPT  220 (277)
T ss_pred             hhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHH---HHHHHh----cCC--------CCC
Confidence            11223467889999999988889999999999999999999999987543211   111110    000        011


Q ss_pred             CCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          571 YDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       571 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                      ........+.+++.+||+.+|.+||++.+++++-
T Consensus       221 ~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~  254 (277)
T cd06641         221 LEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHK  254 (277)
T ss_pred             CCcccCHHHHHHHHHHccCChhhCcCHHHHHhCH
Confidence            1122346688999999999999999999999963

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=100.00  E-value=1.1e-35  Score=306.44  Aligned_cols=262  Identities=23%  Similarity=0.310  Sum_probs=199.0

Q ss_pred             CcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc--hhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEec
Q 048419          331 GFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS--QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDY  408 (653)
Q Consensus       331 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~  408 (653)
                      +|...+.||+|+||.||+|....+|+.+|+|++....  ......+.+|++++++++|+|++++++++.+.+..++|+||
T Consensus         1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   80 (284)
T cd07839           1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY   80 (284)
T ss_pred             CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence            4777899999999999999999899999999986532  22235677899999999999999999999999999999999


Q ss_pred             cCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCC
Q 048419          409 VPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHG  488 (653)
Q Consensus       409 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~  488 (653)
                      ++ ++|.+++....    ..+++.+++.++.||++||.|||+   ++++|+||||+||+++.++.+||+|||+++.....
T Consensus        81 ~~-~~l~~~~~~~~----~~~~~~~~~~~~~qi~~al~~LH~---~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~  152 (284)
T cd07839          81 CD-QDLKKYFDSCN----GDIDPEIVKSFMFQLLKGLAFCHS---HNVLHRDLKPQNLLINKNGELKLADFGLARAFGIP  152 (284)
T ss_pred             CC-CCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEEcCCCcEEECccchhhccCCC
Confidence            97 57888776432    348999999999999999999999   89999999999999999999999999999865432


Q ss_pred             CCCcccccccCCcccCccccccCC-CCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccc------hh
Q 048419          489 ANPQTTHIVGTLGYLAPELTRTGK-ATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGE------IT  561 (653)
Q Consensus       489 ~~~~~~~~~gt~~y~aPE~~~~~~-~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~------~~  561 (653)
                      .. ......++..|+|||.+.+.. ++.++|||||||++|||++|+.|+......... + +.+........      +.
T Consensus       153 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~  229 (284)
T cd07839         153 VR-CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQ-L-KRIFRLLGTPTEESWPGVS  229 (284)
T ss_pred             CC-CcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHH-H-HHHHHHhCCCChHHhHHhh
Confidence            21 122345788999999887644 688999999999999999999986543321111 1 11110000000      00


Q ss_pred             Hhhhhc----c-C-----cCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 048419          562 QAIDQT----L-D-----YYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEF  603 (653)
Q Consensus       562 ~~~d~~----l-~-----~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  603 (653)
                      +..+..    . .     .........+.+++.+||+.||.+|||+.|++++
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h  281 (284)
T cd07839         230 KLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQH  281 (284)
T ss_pred             hcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcC
Confidence            000000    0 0     0011134678899999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=100.00  E-value=1.2e-35  Score=311.31  Aligned_cols=263  Identities=22%  Similarity=0.282  Sum_probs=189.4

Q ss_pred             ceeeeeeCcEEEEEEEeCC--CCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecc--cceeEEEEeccC
Q 048419          335 QNLVGSGGFGRVYRGLMPS--LGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRK--QDELLLVYDYVP  410 (653)
Q Consensus       335 ~~~LG~G~fg~Vy~~~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~--~~~~~lV~E~~~  410 (653)
                      .+.||+|+||.||+|....  .+..||+|.+....  ....+.+|+.++++++||||+++++++..  ....++|+||++
T Consensus         6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~   83 (317)
T cd07867           6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE   83 (317)
T ss_pred             ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC
Confidence            4689999999999999654  45789999986442  23457789999999999999999998844  457899999996


Q ss_pred             CCCchhhhhcccc----cccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEE----cCCCcEEEEeecCc
Q 048419          411 NGSLDKLLFDKDH----KLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILL----DTYLNAKLGDFGLA  482 (653)
Q Consensus       411 ~gsL~~~l~~~~~----~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll----~~~~~~kl~DfGla  482 (653)
                      + +|.+++.....    .....+++..++.++.||+.||.|||+   ++|+||||||+|||+    +.++.+||+|||++
T Consensus        84 ~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a  159 (317)
T cd07867          84 H-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHA---NWVLHRDLKPANILVMGEGPERGRVKIADMGFA  159 (317)
T ss_pred             C-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHh---CCEEcCCCCHHHEEEccCCCCCCcEEEeeccce
Confidence            5 77777653211    112358889999999999999999999   899999999999999    56778999999999


Q ss_pred             ccccCCCCC--cccccccCCcccCccccccC-CCCCccceeehHHHHHHHHhCCCCCChhhhhhH-------HHHHHHHH
Q 048419          483 KIYEHGANP--QTTHIVGTLGYLAPELTRTG-KATTSTDVYSYGILMLEVACGRRSIEPQKAAAE-------LLLVDWVK  552 (653)
Q Consensus       483 ~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~-~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~-------~~l~~~~~  552 (653)
                      +........  ......+|+.|+|||.+.+. .++.++|||||||++|||+||+.||........       ..+.....
T Consensus       160 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~  239 (317)
T cd07867         160 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFS  239 (317)
T ss_pred             eccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHH
Confidence            876443221  22345689999999998764 578999999999999999999999975432110       00000010


Q ss_pred             hhh-----------cccchhHhhhh-------------ccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 048419          553 ELH-----------LEGEITQAIDQ-------------TLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEF  603 (653)
Q Consensus       553 ~~~-----------~~~~~~~~~d~-------------~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  603 (653)
                      ...           ...........             .+..........+.+|+.+|++.||.+|||+.|++++
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~h  314 (317)
T cd07867         240 VMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQD  314 (317)
T ss_pred             hcCCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhcC
Confidence            000           00000000000             0000011122457889999999999999999999875

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.9e-36  Score=305.42  Aligned_cols=268  Identities=25%  Similarity=0.348  Sum_probs=205.2

Q ss_pred             cCHHHHHHhhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhh--cCCCceeeeeeeec
Q 048419          320 FKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGR--LRHRNLVQLHGWCR  397 (653)
Q Consensus       320 f~~~el~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~H~niv~l~g~~~  397 (653)
                      .++---+++.+.....+.||+|.||.||+|.++  |+.||||++...+   .+.+.+|.++.+.  |+|+||+.+++.-.
T Consensus       201 lplLVQRTiarqI~L~e~IGkGRyGEVwrG~wr--Ge~VAVKiF~srd---E~SWfrEtEIYqTvmLRHENILgFIaaD~  275 (513)
T KOG2052|consen  201 LPLLVQRTIARQIVLQEIIGKGRFGEVWRGRWR--GEDVAVKIFSSRD---ERSWFRETEIYQTVMLRHENILGFIAADN  275 (513)
T ss_pred             chhHhHHhhhheeEEEEEecCccccceeecccc--CCceEEEEecccc---hhhhhhHHHHHHHHHhccchhhhhhhccc
Confidence            333344566677888899999999999999997  7899999995433   3556677777765  59999999998765


Q ss_pred             ccc----eeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhc-----CCCCeEecCCCCCcEEE
Q 048419          398 KQD----ELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEE-----CNQRVVHRDVKPSNILL  468 (653)
Q Consensus       398 ~~~----~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~-----~~~~ivH~Dlkp~NIll  468 (653)
                      ..+    .++||.+|.++|||.+||...      .++.+..++++.-+|.||++||.+     ..+.|.|||||+.|||+
T Consensus       276 ~~~gs~TQLwLvTdYHe~GSL~DyL~r~------tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILV  349 (513)
T KOG2052|consen  276 KDNGSWTQLWLVTDYHEHGSLYDYLNRN------TVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV  349 (513)
T ss_pred             cCCCceEEEEEeeecccCCcHHHHHhhc------cCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEE
Confidence            543    689999999999999999764      388899999999999999999973     35779999999999999


Q ss_pred             cCCCcEEEEeecCcccccCCCC---CcccccccCCcccCccccccCC------CCCccceeehHHHHHHHHhCC------
Q 048419          469 DTYLNAKLGDFGLAKIYEHGAN---PQTTHIVGTLGYLAPELTRTGK------ATTSTDVYSYGILMLEVACGR------  533 (653)
Q Consensus       469 ~~~~~~kl~DfGla~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~------~~~ksDV~s~Gvvl~elltG~------  533 (653)
                      ..++.+.|+|+|||........   ......+||.+|||||++...-      .-..+||||||+++||++...      
T Consensus       350 Kkn~~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~  429 (513)
T KOG2052|consen  350 KKNGTCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIV  429 (513)
T ss_pred             ccCCcEEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEe
Confidence            9999999999999987655432   2234568999999999986531      224789999999999997532      


Q ss_pred             ----CCCChhhhhhHHHHHHHHHhhhcccchhHh-----hhhcc--CcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 048419          534 ----RSIEPQKAAAELLLVDWVKELHLEGEITQA-----IDQTL--DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVE  602 (653)
Q Consensus       534 ----~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~-----~d~~l--~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~  602 (653)
                          .||....+.+           ..-+++.++     +.|..  .+...+.+..+.+|+..||..||..|-|+-.+-+
T Consensus       430 eey~~Pyyd~Vp~D-----------Ps~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKK  498 (513)
T KOG2052|consen  430 EEYQLPYYDVVPSD-----------PSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKK  498 (513)
T ss_pred             hhhcCCcccCCCCC-----------CCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHH
Confidence                4544332211           111112221     11222  3455678899999999999999999999999988


Q ss_pred             HHcCCCC
Q 048419          603 FLLGDSS  609 (653)
Q Consensus       603 ~L~~~~~  609 (653)
                      .|.....
T Consensus       499 tl~~l~~  505 (513)
T KOG2052|consen  499 TLAKLSN  505 (513)
T ss_pred             HHHHHhc
Confidence            8865443

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=100.00  E-value=4.3e-35  Score=306.00  Aligned_cols=250  Identities=28%  Similarity=0.381  Sum_probs=201.3

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC---chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN---SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVY  406 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  406 (653)
                      +.|...+.||+|+||.||+|....+++.||+|++...   ..+..+.+.+|+++++.++|||++++.++|...+..++|+
T Consensus        15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~   94 (307)
T cd06607          15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVM   94 (307)
T ss_pred             hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEH
Confidence            5578889999999999999999888999999998643   2334567889999999999999999999999999999999


Q ss_pred             eccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccccc
Q 048419          407 DYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE  486 (653)
Q Consensus       407 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~  486 (653)
                      ||++ |+|.+++....    ..+++..+..++.|++.||.|||+   .+++|+||+|+||+++.++.+||+|||++....
T Consensus        95 e~~~-g~l~~~~~~~~----~~l~~~~~~~~~~ql~~~L~~LH~---~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~  166 (307)
T cd06607          95 EYCL-GSASDILEVHK----KPLQEVEIAAICHGALQGLAYLHS---HERIHRDIKAGNILLTEPGTVKLADFGSASLVS  166 (307)
T ss_pred             HhhC-CCHHHHHHHcc----cCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCcccEEECCCCCEEEeecCcceecC
Confidence            9996 57777765432    348999999999999999999999   899999999999999999999999999987643


Q ss_pred             CCCCCcccccccCCcccCccccc---cCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHh
Q 048419          487 HGANPQTTHIVGTLGYLAPELTR---TGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQA  563 (653)
Q Consensus       487 ~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~  563 (653)
                      ..     ....++..|+|||.+.   ...++.++||||||+++|||++|+.|+..........   ...    ....   
T Consensus       167 ~~-----~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~---~~~----~~~~---  231 (307)
T cd06607         167 PA-----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALY---HIA----QNDS---  231 (307)
T ss_pred             CC-----CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHH---HHh----cCCC---
Confidence            22     2346788999999874   4568889999999999999999999987654322110   000    0000   


Q ss_pred             hhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          564 IDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       564 ~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                        +.  .........+.+++.+||+.+|.+||++.+|+++..-
T Consensus       232 --~~--~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~  270 (307)
T cd06607         232 --PT--LSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHRFV  270 (307)
T ss_pred             --CC--CCchhhCHHHHHHHHHHhcCChhhCcCHHHHhcChhh
Confidence              00  0112234678999999999999999999999987543

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=3.5e-36  Score=322.69  Aligned_cols=249  Identities=28%  Similarity=0.395  Sum_probs=206.3

Q ss_pred             cceeeeeeCcEEEEEEEeCCCC----cEEEEEEeccC-chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEec
Q 048419          334 EQNLVGSGGFGRVYRGLMPSLG----LEVAIKRIGHN-SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDY  408 (653)
Q Consensus       334 ~~~~LG~G~fg~Vy~~~~~~~~----~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~  408 (653)
                      ..++||+|+||+||||.+-..|    .+||||++... ..+...++++|+..|.+|+|||+++|+|+|.... +.||++|
T Consensus       700 k~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq~  778 (1177)
T KOG1025|consen  700 KDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQL  778 (1177)
T ss_pred             hhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHHh
Confidence            3679999999999999875444    46899988654 5566789999999999999999999999998776 8899999


Q ss_pred             cCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCC
Q 048419          409 VPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHG  488 (653)
Q Consensus       409 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~  488 (653)
                      ||.|+|.+|++.+    +..+-.+..+.|+.|||+||.|||+   +.++||||..+|||+.+-..+||.|||+++....+
T Consensus       779 mP~G~LlDyvr~h----r~~igsq~lLnw~~QIAkgM~YLe~---qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d  851 (1177)
T KOG1025|consen  779 MPLGCLLDYVREH----RDNIGSQDLLNWCYQIAKGMKYLEE---QRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPD  851 (1177)
T ss_pred             cccchHHHHHHHh----hccccHHHHHHHHHHHHHHHHHHHh---cchhhhhhhhhheeecCCCeEEEEecchhhccCcc
Confidence            9999999999886    3557888899999999999999999   99999999999999999999999999999988665


Q ss_pred             CCCccc-ccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhh
Q 048419          489 ANPQTT-HIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQ  566 (653)
Q Consensus       489 ~~~~~~-~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  566 (653)
                      ...-.. ...-.+.|||-|.+....++.++|||||||++||++| |..|++.....+                +.+++..
T Consensus       852 ~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~e----------------I~dlle~  915 (1177)
T KOG1025|consen  852 EKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEE----------------IPDLLEK  915 (1177)
T ss_pred             cccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHH----------------hhHHHhc
Confidence            433222 1233568999999999999999999999999999999 999998754432                2222211


Q ss_pred             cc-CcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          567 TL-DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       567 ~l-~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                      .. ...+..+...+..++.+||..|+..||+++++...+..
T Consensus       916 geRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~  956 (1177)
T KOG1025|consen  916 GERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSR  956 (1177)
T ss_pred             cccCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHH
Confidence            11 22344566778899999999999999999999987643

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=100.00  E-value=2.3e-35  Score=308.93  Aligned_cols=269  Identities=23%  Similarity=0.304  Sum_probs=201.0

Q ss_pred             CcCcceeeeeeCcEEEEEEEeCC--CCcEEEEEEeccCc---hhhHHHHHHHHHHHhhcCCCceeeeeeeeccc--ceeE
Q 048419          331 GFGEQNLVGSGGFGRVYRGLMPS--LGLEVAIKRIGHNS---QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQ--DELL  403 (653)
Q Consensus       331 ~f~~~~~LG~G~fg~Vy~~~~~~--~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~--~~~~  403 (653)
                      +|+..+.||+|+||.||+|....  .+..||+|.+....   ....+.+.+|+.++++++||||+++++++.+.  +..+
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~   80 (316)
T cd07842           1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY   80 (316)
T ss_pred             CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence            47778999999999999999987  78999999997632   33456778899999999999999999999888  7899


Q ss_pred             EEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcC----CCcEEEEee
Q 048419          404 LVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDT----YLNAKLGDF  479 (653)
Q Consensus       404 lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~----~~~~kl~Df  479 (653)
                      +||||+++ +|.+++..........+++..++.++.||+.||.|||+   ++++||||||+||+++.    ++.+||+||
T Consensus        81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~h~dlkp~Nil~~~~~~~~~~~kl~Df  156 (316)
T cd07842          81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHS---NWVLHRDLKPANILVMGEGPERGVVKIGDL  156 (316)
T ss_pred             EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHh---CCEeeCCCCHHHEEEcCCCCccceEEECCC
Confidence            99999975 67776654332223368889999999999999999999   89999999999999999    999999999


Q ss_pred             cCcccccCCCC--CcccccccCCcccCccccccC-CCCCccceeehHHHHHHHHhCCCCCChhhhhh-------HHHHHH
Q 048419          480 GLAKIYEHGAN--PQTTHIVGTLGYLAPELTRTG-KATTSTDVYSYGILMLEVACGRRSIEPQKAAA-------ELLLVD  549 (653)
Q Consensus       480 Gla~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~-~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~-------~~~l~~  549 (653)
                      |++........  .......++..|+|||.+.+. .++.++|||||||+++||++|+.||.......       ...+..
T Consensus       157 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (316)
T cd07842         157 GLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLER  236 (316)
T ss_pred             ccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHH
Confidence            99986643322  112234678899999987664 57899999999999999999999997544321       001111


Q ss_pred             HHHhhhcc-----------cchhHhhhhcc-CcCC---------H--HHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 048419          550 WVKELHLE-----------GEITQAIDQTL-DYYD---------L--AEAELVLNLGLFCSAPNPVYRPDMRRVVEF  603 (653)
Q Consensus       550 ~~~~~~~~-----------~~~~~~~d~~l-~~~~---------~--~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  603 (653)
                      .+......           .......+... ..+.         .  .....+.+++.+||+.||++|||+.|++++
T Consensus       237 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~  313 (316)
T cd07842         237 IFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEH  313 (316)
T ss_pred             HHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence            11100000           00000000000 0000         0  223568899999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=100.00  E-value=2.4e-36  Score=315.26  Aligned_cols=249  Identities=27%  Similarity=0.424  Sum_probs=208.7

Q ss_pred             CcceeeeeeCcEEEEEEEeCC----CCcEEEEEEeccC-chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEe
Q 048419          333 GEQNLVGSGGFGRVYRGLMPS----LGLEVAIKRIGHN-SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYD  407 (653)
Q Consensus       333 ~~~~~LG~G~fg~Vy~~~~~~----~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E  407 (653)
                      ...++||.|-||.||+|....    ....||||..+.. ..+..+.|++|..+|++++||||++++|.|.+. ..|||||
T Consensus       392 tl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~-P~WivmE  470 (974)
T KOG4257|consen  392 TLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQ-PMWIVME  470 (974)
T ss_pred             cHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeecc-ceeEEEe
Confidence            345789999999999998642    2346899998764 556688999999999999999999999999766 4799999


Q ss_pred             ccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccC
Q 048419          408 YVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEH  487 (653)
Q Consensus       408 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~  487 (653)
                      .++-|.|..||..+.    ..|+.......+.||+.||+|||+   ..+|||||..+|||+.+..-+||+|||+++.++.
T Consensus       471 L~~~GELr~yLq~nk----~sL~l~tL~ly~~Qi~talaYLeS---krfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed  543 (974)
T KOG4257|consen  471 LAPLGELREYLQQNK----DSLPLRTLTLYCYQICTALAYLES---KRFVHRDIAARNILVSSPQCVKLADFGLSRYLED  543 (974)
T ss_pred             cccchhHHHHHHhcc----ccchHHHHHHHHHHHHHHHHHHHh---hchhhhhhhhhheeecCcceeeecccchhhhccc
Confidence            999999999998764    458888899999999999999999   9999999999999999999999999999999887


Q ss_pred             CCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhh
Q 048419          488 GANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQ  566 (653)
Q Consensus       488 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  566 (653)
                      ......+...-.+.|||||.+.-.+++.++|||.|||++||++. |.+||....+.+...       ....|+       
T Consensus       544 ~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~-------~iEnGe-------  609 (974)
T KOG4257|consen  544 DAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIG-------HIENGE-------  609 (974)
T ss_pred             cchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceEE-------EecCCC-------
Confidence            76655555555779999999999999999999999999999877 999998765533211       111111       


Q ss_pred             ccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          567 TLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       567 ~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                      ++ ..+..++..+..|+.+||+.+|.+||.+.|+...|
T Consensus       610 Rl-P~P~nCPp~LYslmskcWayeP~kRPrftei~~~l  646 (974)
T KOG4257|consen  610 RL-PCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAIL  646 (974)
T ss_pred             CC-CCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHH
Confidence            11 23445778899999999999999999999988665

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=100.00  E-value=3e-35  Score=304.51  Aligned_cols=265  Identities=25%  Similarity=0.327  Sum_probs=199.2

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCch-hhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEec
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQ-QGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDY  408 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~  408 (653)
                      ++|+..+.||+|++|.||+|....+++.||||.+..... .....+.+|++++++++|+||+++++++.+.+..++||||
T Consensus         5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   84 (291)
T cd07844           5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEY   84 (291)
T ss_pred             cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEec
Confidence            568889999999999999999988899999999865432 2234567899999999999999999999999999999999


Q ss_pred             cCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCC
Q 048419          409 VPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHG  488 (653)
Q Consensus       409 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~  488 (653)
                      +++ +|.+++....    ..+++.....++.|++.||.|||+   .+++|+||||+||+++.++.+||+|||+++.....
T Consensus        85 ~~~-~L~~~~~~~~----~~~~~~~~~~~~~ql~~al~~lH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~  156 (291)
T cd07844          85 LDT-DLKQYMDDCG----GGLSMHNVRLFLFQLLRGLAYCHQ---RRVLHRDLKPQNLLISERGELKLADFGLARAKSVP  156 (291)
T ss_pred             CCC-CHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHHh---CCeecccCCHHHEEEcCCCCEEECccccccccCCC
Confidence            975 9999886543    357889999999999999999999   89999999999999999999999999998754322


Q ss_pred             CCCcccccccCCcccCcccccc-CCCCCccceeehHHHHHHHHhCCCCCChhhhh-hHHHHHHHHHhhhcccchhHhhh-
Q 048419          489 ANPQTTHIVGTLGYLAPELTRT-GKATTSTDVYSYGILMLEVACGRRSIEPQKAA-AELLLVDWVKELHLEGEITQAID-  565 (653)
Q Consensus       489 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~d-  565 (653)
                      .. ......++..|+|||.+.+ ..++.++||||+|+++|||++|+.||...... ....................... 
T Consensus       157 ~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (291)
T cd07844         157 SK-TYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSN  235 (291)
T ss_pred             Cc-cccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhc
Confidence            11 1122346788999998865 45788999999999999999999999654321 11111100000000000000000 


Q ss_pred             -------------hccCc--CCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 048419          566 -------------QTLDY--YDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEF  603 (653)
Q Consensus       566 -------------~~l~~--~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  603 (653)
                                   ..+..  ........+.+++.+||+.+|.+||++.|++++
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~  288 (291)
T cd07844         236 PEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKH  288 (291)
T ss_pred             cccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcC
Confidence                         00000  001112567899999999999999999999864

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.3e-35  Score=302.93  Aligned_cols=250  Identities=26%  Similarity=0.395  Sum_probs=202.4

Q ss_pred             CcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC-chhhHHHHHHHHHHHhhcC---CCceeeeeeeecccceeEEEE
Q 048419          331 GFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN-SQQGMKEFVAEIMSMGRLR---HRNLVQLHGWCRKQDELLLVY  406 (653)
Q Consensus       331 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~---H~niv~l~g~~~~~~~~~lV~  406 (653)
                      .|+..+.||+|+||.||+|.+..++..||+|.+... .....+++.+|+.++++++   |+|++++++++......++||
T Consensus         2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~   81 (277)
T cd06917           2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM   81 (277)
T ss_pred             hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence            466788999999999999999888999999998654 3345567889999999997   999999999999999999999


Q ss_pred             eccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccccc
Q 048419          407 DYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE  486 (653)
Q Consensus       407 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~  486 (653)
                      ||+++++|.+++...      .+++...+.++.|++.||.|||+   .+++|+||+|+||+++.++.++|+|||++....
T Consensus        82 e~~~~~~L~~~~~~~------~l~~~~~~~i~~~i~~~l~~lh~---~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~  152 (277)
T cd06917          82 EYAEGGSVRTLMKAG------PIAEKYISVIIREVLVALKYIHK---VGVIHRDIKAANILVTNTGNVKLCDFGVAALLN  152 (277)
T ss_pred             ecCCCCcHHHHHHcc------CCCHHHHHHHHHHHHHHHHHHHh---CCcccCCcCHHHEEEcCCCCEEEccCCceeecC
Confidence            999999999988543      48899999999999999999999   899999999999999999999999999998765


Q ss_pred             CCCCCcccccccCCcccCccccccC-CCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhh
Q 048419          487 HGANPQTTHIVGTLGYLAPELTRTG-KATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAID  565 (653)
Q Consensus       487 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d  565 (653)
                      .... ......|+..|+|||.+.++ .++.++|||||||++|+|++|+.||.........      .. ....     ..
T Consensus       153 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~------~~-~~~~-----~~  219 (277)
T cd06917         153 QNSS-KRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAM------ML-IPKS-----KP  219 (277)
T ss_pred             CCcc-ccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhh------hc-cccC-----CC
Confidence            4332 22334688899999988654 4688999999999999999999999754332111      00 0000     00


Q ss_pred             hccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          566 QTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       566 ~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                      +.+..  ......+.+++.+||+.||.+||++.+++++-
T Consensus       220 ~~~~~--~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~~  256 (277)
T cd06917         220 PRLED--NGYSKLLREFVAACLDEEPKERLSAEELLKSK  256 (277)
T ss_pred             CCCCc--ccCCHHHHHHHHHHcCCCcccCcCHHHHhhCh
Confidence            11100  01345788999999999999999999998754

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>PHA03207 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=1.2e-35  Score=320.77  Aligned_cols=265  Identities=23%  Similarity=0.274  Sum_probs=201.0

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCC--CCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEe
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPS--LGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYD  407 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E  407 (653)
                      .+|...+.||+|+||.||++...+  .+..||+|.+...     +...+|++++++++|+||+++++++......++|||
T Consensus        92 ~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~e  166 (392)
T PHA03207         92 MQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVMP  166 (392)
T ss_pred             CceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEeh
Confidence            468889999999999999997643  4578999988543     234589999999999999999999999999999999


Q ss_pred             ccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccC
Q 048419          408 YVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEH  487 (653)
Q Consensus       408 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~  487 (653)
                      ++. ++|.+++..     ...+++.+++.++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+++....
T Consensus       167 ~~~-~~l~~~l~~-----~~~l~~~~~~~i~~ql~~aL~~LH~---~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~  237 (392)
T PHA03207        167 KYK-CDLFTYVDR-----SGPLPLEQAITIQRRLLEALAYLHG---RGIIHRDVKTENIFLDEPENAVLGDFGAACKLDA  237 (392)
T ss_pred             hcC-CCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEcCCCCEEEccCccccccCc
Confidence            995 688888843     2458999999999999999999999   8999999999999999999999999999976543


Q ss_pred             CCC-CcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhH-HHHHHHHHhhhc------cc-
Q 048419          488 GAN-PQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAE-LLLVDWVKELHL------EG-  558 (653)
Q Consensus       488 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~-~~l~~~~~~~~~------~~-  558 (653)
                      ... .......||+.|+|||++.+..++.++|||||||++|||++|+.||........ ..+...+.....      .. 
T Consensus       238 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~  317 (392)
T PHA03207        238 HPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNG  317 (392)
T ss_pred             ccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCcc
Confidence            322 222345799999999999988999999999999999999999999975432211 111111111000      00 


Q ss_pred             --chhHhhhh---cc-CcCC-------HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcCCC
Q 048419          559 --EITQAIDQ---TL-DYYD-------LAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLGDS  608 (653)
Q Consensus       559 --~~~~~~d~---~l-~~~~-------~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  608 (653)
                        .+...+..   .. ..+.       ......+.+++.+||+.||.+||++.|++.+-...+
T Consensus       318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~~  380 (392)
T PHA03207        318 STNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLFTK  380 (392)
T ss_pred             chhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCchhhc
Confidence              00000000   00 0000       012346778999999999999999999999865443

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=100.00  E-value=2.2e-35  Score=312.29  Aligned_cols=267  Identities=26%  Similarity=0.339  Sum_probs=200.5

Q ss_pred             hhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC-chhhHHHHHHHHHHHhhcCCCceeeeeeeeccc-----ce
Q 048419          328 VTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN-SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQ-----DE  401 (653)
Q Consensus       328 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~-----~~  401 (653)
                      ++++|...+.||+|+||.||+|.+..+|+.||||++... .......+..|+.++++++|+||+++++++...     ..
T Consensus         3 ~~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~   82 (336)
T cd07849           3 VGPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFND   82 (336)
T ss_pred             cccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccce
Confidence            457899999999999999999999888999999998643 233456788999999999999999999987544     35


Q ss_pred             eEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecC
Q 048419          402 LLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGL  481 (653)
Q Consensus       402 ~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl  481 (653)
                      .++|+||+++ +|.+++..      ..+++..++.++.|++.||.|||+   .+|+||||||+||+++.++.+||+|||+
T Consensus        83 ~~lv~e~~~~-~l~~~~~~------~~l~~~~~~~i~~ql~~aL~~LH~---~~ivH~dlkp~Nill~~~~~~kl~dfg~  152 (336)
T cd07849          83 VYIVQELMET-DLYKLIKT------QHLSNDHIQYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTNCDLKICDFGL  152 (336)
T ss_pred             EEEEehhccc-CHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHEEECCCCCEEECcccc
Confidence            7999999964 78777743      248899999999999999999999   8999999999999999999999999999


Q ss_pred             cccccCCCCC--cccccccCCcccCcccccc-CCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhccc
Q 048419          482 AKIYEHGANP--QTTHIVGTLGYLAPELTRT-GKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEG  558 (653)
Q Consensus       482 a~~~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~  558 (653)
                      +.........  ......|+..|+|||.+.+ ..++.++|||||||++|||++|+.||..............+.......
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~  232 (336)
T cd07849         153 ARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQE  232 (336)
T ss_pred             eeeccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHH
Confidence            9865432211  1123467899999998654 468899999999999999999999997543322111000000000000


Q ss_pred             chhHhhhhc-------c---CcCC-----HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          559 EITQAIDQT-------L---DYYD-----LAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       559 ~~~~~~d~~-------l---~~~~-----~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                      .+....+..       +   ....     ......+.+++.+||+.+|.+||++.|++++-
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp  293 (336)
T cd07849         233 DLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHP  293 (336)
T ss_pred             HHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCc
Confidence            111101000       0   0000     11245688999999999999999999999873

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=100.00  E-value=1.5e-35  Score=301.02  Aligned_cols=249  Identities=23%  Similarity=0.297  Sum_probs=204.4

Q ss_pred             CcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc---hhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEe
Q 048419          331 GFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS---QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYD  407 (653)
Q Consensus       331 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E  407 (653)
                      +|+..+.||+|+||.||+|.+..++..||+|.+....   ....+.+.+|++.+++++||||+++++.+.+.+..++|+|
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   80 (258)
T cd05578           1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD   80 (258)
T ss_pred             CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence            4778899999999999999998889999999996532   2456789999999999999999999999999999999999


Q ss_pred             ccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccC
Q 048419          408 YVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEH  487 (653)
Q Consensus       408 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~  487 (653)
                      |+++++|.+++...     ..+++.++..++.|+++||.|||+   ++++|+||+|+||++++++.++|+|||++.....
T Consensus        81 ~~~~~~L~~~l~~~-----~~l~~~~~~~~~~~i~~~l~~lh~---~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~  152 (258)
T cd05578          81 LLLGGDLRYHLSQK-----VKFSEEQVKFWICEIVLALEYLHS---KGIIHRDIKPDNILLDEQGHVHITDFNIATKVTP  152 (258)
T ss_pred             CCCCCCHHHHHHhc-----CCcCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeEEcCCCCEEEeecccccccCC
Confidence            99999999998654     248889999999999999999999   8999999999999999999999999999886543


Q ss_pred             CCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhc
Q 048419          488 GANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQT  567 (653)
Q Consensus       488 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~  567 (653)
                      ..  ......|+..|+|||.+.+..++.++|+||||+++|+|++|+.|+..........+    ......         .
T Consensus       153 ~~--~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~----~~~~~~---------~  217 (258)
T cd05578         153 DT--LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQI----RAKQET---------A  217 (258)
T ss_pred             Cc--cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHH----HHHhcc---------c
Confidence            32  22334678899999999888899999999999999999999999986543211111    111100         0


Q ss_pred             cCcCCHHHHHHHHHHHHHcCCCCCCCCCCH--HHHHH
Q 048419          568 LDYYDLAEAELVLNLGLFCSAPNPVYRPDM--RRVVE  602 (653)
Q Consensus       568 l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~--~evl~  602 (653)
                      ....+......+.+++.+||+.||.+||++  +|+++
T Consensus       218 ~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~  254 (258)
T cd05578         218 DVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLKN  254 (258)
T ss_pred             cccCcccCcHHHHHHHHHHccCChhHcCCccHHHHhc
Confidence            011112234678899999999999999999  66553

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=100.00  E-value=3.3e-35  Score=302.82  Aligned_cols=265  Identities=27%  Similarity=0.380  Sum_probs=202.8

Q ss_pred             CcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCch-hhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEecc
Q 048419          331 GFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQ-QGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYV  409 (653)
Q Consensus       331 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~  409 (653)
                      +|+..+.||+|++|.||+|....+|..||||++..... ...+.+.+|++++++++|+||+++++++...+..++||||+
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   80 (284)
T cd07836           1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM   80 (284)
T ss_pred             CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence            47788999999999999999998899999999876533 23466788999999999999999999999999999999999


Q ss_pred             CCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCC
Q 048419          410 PNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGA  489 (653)
Q Consensus       410 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~  489 (653)
                      ++ +|.+++.....  ...+++.++..++.|++.||.|||+   .+++|+||||+||++++++.+||+|||++.......
T Consensus        81 ~~-~l~~~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~  154 (284)
T cd07836          81 DK-DLKKYMDTHGV--RGALDPNTVKSFTYQLLKGIAFCHE---NRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPV  154 (284)
T ss_pred             Cc-cHHHHHHhcCC--CCCcCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCc
Confidence            85 88888865432  3458999999999999999999999   899999999999999999999999999997654321


Q ss_pred             CCcccccccCCcccCccccccC-CCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHH-HHHHHhhhcccchhHhh---
Q 048419          490 NPQTTHIVGTLGYLAPELTRTG-KATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLL-VDWVKELHLEGEITQAI---  564 (653)
Q Consensus       490 ~~~~~~~~gt~~y~aPE~~~~~-~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~---  564 (653)
                      . ......++..|++||.+.+. .++.++|||||||++|||++|+.||......+.... .+... ...........   
T Consensus       155 ~-~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  232 (284)
T cd07836         155 N-TFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMG-TPTESTWPGISQLP  232 (284)
T ss_pred             c-ccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhC-CCChhhHHHHhcCc
Confidence            1 11223568899999988654 568899999999999999999999976543221110 00000 00000000000   


Q ss_pred             ----------hhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 048419          565 ----------DQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEF  603 (653)
Q Consensus       565 ----------d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  603 (653)
                                +..+..........+.+++.+|++.||.+||++.|++++
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~  281 (284)
T cd07836         233 EYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQH  281 (284)
T ss_pred             hhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence                      000001111234678899999999999999999999864

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=100.00  E-value=5.3e-35  Score=294.60  Aligned_cols=250  Identities=29%  Similarity=0.420  Sum_probs=207.4

Q ss_pred             cCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEeccCC
Q 048419          332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPN  411 (653)
Q Consensus       332 f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~  411 (653)
                      |...+.||+|++|.||++....++..+++|++........+.+.+|++.+++++|+|++++++.+...+..++++||+++
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~   81 (253)
T cd05122           2 FEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCSG   81 (253)
T ss_pred             ceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCCC
Confidence            66788999999999999999888999999999776555678899999999999999999999999999999999999999


Q ss_pred             CCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCCCC
Q 048419          412 GSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANP  491 (653)
Q Consensus       412 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~  491 (653)
                      ++|.+++....    ..+++..++.++.|++.+|.|||+   .+++|+||+|+||++++++.++|+|||.+........ 
T Consensus        82 ~~L~~~~~~~~----~~~~~~~~~~i~~~i~~~l~~lh~---~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~-  153 (253)
T cd05122          82 GSLKDLLKSTN----QTLTESQIAYVCKELLKGLEYLHS---NGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA-  153 (253)
T ss_pred             CcHHHHHhhcC----CCCCHHHHHHHHHHHHHHHHHhhc---CCEecCCCCHHHEEEccCCeEEEeecccccccccccc-
Confidence            99999987642    358999999999999999999999   9999999999999999999999999999987654322 


Q ss_pred             cccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhccCcC
Q 048419          492 QTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYY  571 (653)
Q Consensus       492 ~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~  571 (653)
                       .....++..|+|||.+.+..++.++||||||+++++|++|+.|+...........   ...    .......      .
T Consensus       154 -~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~---~~~----~~~~~~~------~  219 (253)
T cd05122         154 -RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFK---IAT----NGPPGLR------N  219 (253)
T ss_pred             -ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHH---HHh----cCCCCcC------c
Confidence             2345688899999999888899999999999999999999999976533221110   000    0000000      0


Q ss_pred             CHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 048419          572 DLAEAELVLNLGLFCSAPNPVYRPDMRRVVEF  603 (653)
Q Consensus       572 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  603 (653)
                      .......+.+++.+||+.||.+|||+.|++++
T Consensus       220 ~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~  251 (253)
T cd05122         220 PEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKH  251 (253)
T ss_pred             ccccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence            11114678999999999999999999999875

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=100.00  E-value=5.4e-35  Score=299.10  Aligned_cols=254  Identities=22%  Similarity=0.325  Sum_probs=189.9

Q ss_pred             eeeeeCcEEEEEEEeCCC--CcEEEEEEeccCc-hhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEeccCCCC
Q 048419          337 LVGSGGFGRVYRGLMPSL--GLEVAIKRIGHNS-QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGS  413 (653)
Q Consensus       337 ~LG~G~fg~Vy~~~~~~~--~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gs  413 (653)
                      .||+|+||.||+|.....  ...+++|.+.... ....+.+.+|+..++.++||||+++++.|.+....++||||+++|+
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~   81 (268)
T cd05086           2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD   81 (268)
T ss_pred             cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence            599999999999975432  3456778776443 3456789999999999999999999999999999999999999999


Q ss_pred             chhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCCC-Cc
Q 048419          414 LDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGAN-PQ  492 (653)
Q Consensus       414 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~-~~  492 (653)
                      |.+++.+.... ...+++..++.++.||+.||+|||+   .+++||||||+|||++.++.+||+|||++........ ..
T Consensus        82 L~~~l~~~~~~-~~~~~~~~~~~~~~~i~~al~~lH~---~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~  157 (268)
T cd05086          82 LKSYLSQEQWH-RRNSQLLLLQRMACEIAAGVTHMHK---HNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIET  157 (268)
T ss_pred             HHHHHHhhhcc-cccccHHHHHHHHHHHHHHHHHHHH---CCeeccCCccceEEEcCCccEEecccccccccCcchhhhc
Confidence            99999764321 2346677788999999999999999   8999999999999999999999999999864321111 11


Q ss_pred             ccccccCCcccCcccccc-------CCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhhcccchhHhh
Q 048419          493 TTHIVGTLGYLAPELTRT-------GKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELHLEGEITQAI  564 (653)
Q Consensus       493 ~~~~~gt~~y~aPE~~~~-------~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  564 (653)
                      .....++..|+|||++..       ..++.++|||||||++|||++ |..|+......+..  ....     .+......
T Consensus       158 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~--~~~~-----~~~~~~~~  230 (268)
T cd05086         158 EDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVL--NHVI-----KDQQVKLF  230 (268)
T ss_pred             ccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHH--HHHH-----hhcccccC
Confidence            123467889999998753       245789999999999999997 46677644332111  1111     11111222


Q ss_pred             hhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          565 DQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       565 d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                      ++.+.   ......+.+++..|| .+|.+||++.+|++.|.
T Consensus       231 ~~~~~---~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~  267 (268)
T cd05086         231 KPQLE---LPYSERWYEVLQFCW-LSPEKRATAEEVHRLLT  267 (268)
T ss_pred             CCccC---CCCcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence            22221   112356778889999 67999999999999884

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=100.00  E-value=5.1e-35  Score=302.13  Aligned_cols=252  Identities=22%  Similarity=0.320  Sum_probs=205.0

Q ss_pred             cCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEeccCC
Q 048419          332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPN  411 (653)
Q Consensus       332 f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~  411 (653)
                      |...+.||+|++|.||++....++..+++|++........+.+.+|+.++++++|+|++++++++...+..++++||+++
T Consensus        21 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~  100 (285)
T cd06648          21 LDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEG  100 (285)
T ss_pred             hhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCC
Confidence            44567999999999999998888999999998765555567788999999999999999999999999999999999999


Q ss_pred             CCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCCCC
Q 048419          412 GSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANP  491 (653)
Q Consensus       412 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~  491 (653)
                      ++|.+++...      .+++.++..++.|++.||.|||+   ++++||||+|+||+++.++.++|+|||++........ 
T Consensus       101 ~~L~~~~~~~------~~~~~~~~~~~~ql~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~-  170 (285)
T cd06648         101 GALTDIVTHT------RMNEEQIATVCLAVLKALSFLHA---QGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVP-  170 (285)
T ss_pred             CCHHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCChhhEEEcCCCcEEEcccccchhhccCCc-
Confidence            9999998652      37889999999999999999999   8999999999999999999999999998876543222 


Q ss_pred             cccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhccCcC
Q 048419          492 QTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYY  571 (653)
Q Consensus       492 ~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~  571 (653)
                      ......|+..|+|||.+.+..++.++|||||||+++||++|+.||........   ...+...    .     .+.+. .
T Consensus       171 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~---~~~~~~~----~-----~~~~~-~  237 (285)
T cd06648         171 RRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQA---MKRIRDN----L-----PPKLK-N  237 (285)
T ss_pred             ccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHH---HHHHHhc----C-----CCCCc-c
Confidence            22334688999999999888899999999999999999999999875433211   1111110    0     01110 0


Q ss_pred             CHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          572 DLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       572 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                      .......+.+++.+||+.+|.+||++.+++++-..
T Consensus       238 ~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~  272 (285)
T cd06648         238 LHKVSPRLRSFLDRMLVRDPAQRATAAELLNHPFL  272 (285)
T ss_pred             cccCCHHHHHHHHHHcccChhhCcCHHHHccCccc
Confidence            11134578999999999999999999999975433

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=100.00  E-value=1.6e-35  Score=301.94  Aligned_cols=255  Identities=24%  Similarity=0.392  Sum_probs=205.4

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc-hhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEec
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS-QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDY  408 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~  408 (653)
                      ++|+..+.||+|++|.||++.+..+++.+|+|++.... ....+.+.+|++.+++++|+||+++++++...+..++++||
T Consensus         1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   80 (265)
T cd06605           1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEY   80 (265)
T ss_pred             CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEe
Confidence            35677889999999999999999889999999987653 34567789999999999999999999999999999999999


Q ss_pred             cCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCC
Q 048419          409 VPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHG  488 (653)
Q Consensus       409 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~  488 (653)
                      +++++|.+++....    ..+++..+.+++.|++.||+|||+  ..+++|+||||+||+++.++.+||+|||.+......
T Consensus        81 ~~~~~L~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~lH~--~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~  154 (265)
T cd06605          81 MDGGSLDKILKEVQ----GRIPERILGKIAVAVLKGLTYLHE--KHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNS  154 (265)
T ss_pred             cCCCcHHHHHHHcc----CCCCHHHHHHHHHHHHHHHHHHcC--CCCeecCCCCHHHEEECCCCCEEEeecccchhhHHH
Confidence            99999999987642    457888999999999999999998  268999999999999999999999999998765322


Q ss_pred             CCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhcc
Q 048419          489 ANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTL  568 (653)
Q Consensus       489 ~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l  568 (653)
                      ..   ....++..|+|||.+.+..++.++||||||+++++|++|+.|+......... ..+.+....         ....
T Consensus       155 ~~---~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~-~~~~~~~~~---------~~~~  221 (265)
T cd06605         155 LA---KTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDG-IFELLQYIV---------NEPP  221 (265)
T ss_pred             Hh---hcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccccccc-HHHHHHHHh---------cCCC
Confidence            11   1256888999999999889999999999999999999999999754321110 111111111         0000


Q ss_pred             CcCCHH-HHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 048419          569 DYYDLA-EAELVLNLGLFCSAPNPVYRPDMRRVVEF  603 (653)
Q Consensus       569 ~~~~~~-~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  603 (653)
                      ...... ....+.+++..||..+|.+||++.+++++
T Consensus       222 ~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~  257 (265)
T cd06605         222 PRLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLEH  257 (265)
T ss_pred             CCCChhhcCHHHHHHHHHHcCCCchhCcCHHHHhhC
Confidence            001111 35668899999999999999999999875

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=100.00  E-value=6.9e-35  Score=296.69  Aligned_cols=254  Identities=24%  Similarity=0.379  Sum_probs=209.7

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCch-hhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEec
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQ-QGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDY  408 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~  408 (653)
                      ++|+..+.||+|++|.||++....+++.|+||++..... ...+.+.+|+..+.+++|+|++++++++...+..++|+||
T Consensus         1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (264)
T cd06623           1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEY   80 (264)
T ss_pred             CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEe
Confidence            367888999999999999999998899999999876544 4567899999999999999999999999999999999999


Q ss_pred             cCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCC
Q 048419          409 VPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHG  488 (653)
Q Consensus       409 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~  488 (653)
                      +++++|.+++...     ..+++..++.++.|+++||.|||+.  .+++|+||+|+||+++.++.++|+|||++......
T Consensus        81 ~~~~~L~~~l~~~-----~~l~~~~~~~~~~~l~~~l~~lh~~--~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~  153 (264)
T cd06623          81 MDGGSLADLLKKV-----GKIPEPVLAYIARQILKGLDYLHTK--RHIIHRDIKPSNLLINSKGEVKIADFGISKVLENT  153 (264)
T ss_pred             cCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHhcc--CCCccCCCCHHHEEECCCCCEEEccCccceecccC
Confidence            9999999999764     3488999999999999999999973  69999999999999999999999999999876443


Q ss_pred             CCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhcc
Q 048419          489 ANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTL  568 (653)
Q Consensus       489 ~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l  568 (653)
                      ... .....++..|+|||.+.+..++.++||||||+++|||++|+.|+..........+...+..            ...
T Consensus       154 ~~~-~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~------------~~~  220 (264)
T cd06623         154 LDQ-CNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICD------------GPP  220 (264)
T ss_pred             CCc-ccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhc------------CCC
Confidence            322 1234678899999999988899999999999999999999999976542111111111111            011


Q ss_pred             CcCCHH-HHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 048419          569 DYYDLA-EAELVLNLGLFCSAPNPVYRPDMRRVVEF  603 (653)
Q Consensus       569 ~~~~~~-~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  603 (653)
                      ...... ....+.+++.+||+.+|.+||++.|++++
T Consensus       221 ~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~  256 (264)
T cd06623         221 PSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQH  256 (264)
T ss_pred             CCCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence            111112 35678999999999999999999999985

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=100.00  E-value=5.3e-35  Score=301.36  Aligned_cols=263  Identities=24%  Similarity=0.363  Sum_probs=202.6

Q ss_pred             cCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc--hhhHHHHHHHHHHHhhcCCCceeeeeeeeccc--ceeEEEEe
Q 048419          332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS--QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQ--DELLLVYD  407 (653)
Q Consensus       332 f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~--~~~~lV~E  407 (653)
                      |+..+.||+|++|.||+|....+++.+|+|++....  ....+.+.+|++++++++|+|++++++++...  +..++|+|
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e   80 (287)
T cd07840           1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE   80 (287)
T ss_pred             CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence            566789999999999999999889999999997653  33456788999999999999999999999888  78999999


Q ss_pred             ccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccC
Q 048419          408 YVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEH  487 (653)
Q Consensus       408 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~  487 (653)
                      |+++ +|.+++....    ..+++.+++.++.||+.||+|||+   .+++|+||+|+||++++++.+||+|||++.....
T Consensus        81 ~~~~-~l~~~~~~~~----~~~~~~~~~~i~~~i~~al~~LH~---~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~  152 (287)
T cd07840          81 YMDH-DLTGLLDSPE----VKFTESQIKCYMKQLLEGLQYLHS---NGILHRDIKGSNILINNDGVLKLADFGLARPYTK  152 (287)
T ss_pred             cccc-cHHHHHhccC----CCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCcHHHeEEcCCCCEEEccccceeeccC
Confidence            9975 8888886542    358999999999999999999999   8999999999999999999999999999987654


Q ss_pred             CCCCcccccccCCcccCcccccc-CCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHH-HHHHhhhcccc---hhH
Q 048419          488 GANPQTTHIVGTLGYLAPELTRT-GKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLV-DWVKELHLEGE---ITQ  562 (653)
Q Consensus       488 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~-~~~~~~~~~~~---~~~  562 (653)
                      ..........++..|+|||.+.+ ..++.++||||||+++|||++|+.||............ +..... ....   ...
T Consensus       153 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  231 (287)
T cd07840         153 RNSADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSP-TDENWPGVSK  231 (287)
T ss_pred             CCcccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCC-chhhcccccc
Confidence            43222333456788999997764 45789999999999999999999999765533221111 100000 0000   000


Q ss_pred             -----------hhhhcc-CcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 048419          563 -----------AIDQTL-DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEF  603 (653)
Q Consensus       563 -----------~~d~~l-~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  603 (653)
                                 .....+ ......+...+.+++.+||+.+|.+||++.+++++
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~  284 (287)
T cd07840         232 LPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQH  284 (287)
T ss_pred             chhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence                       000000 00001125678999999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=4.3e-36  Score=311.67  Aligned_cols=248  Identities=29%  Similarity=0.390  Sum_probs=207.0

Q ss_pred             cCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc---hhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEec
Q 048419          332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS---QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDY  408 (653)
Q Consensus       332 f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~  408 (653)
                      |...+.||.|+||.||-+++..+.+.||||++....   .+.+.+++.|+..|++++|||.+.+.|+|..+...||||||
T Consensus        28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEY  107 (948)
T KOG0577|consen   28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEY  107 (948)
T ss_pred             HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHH
Confidence            455677999999999999999999999999997654   34567889999999999999999999999999999999999


Q ss_pred             cCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCC
Q 048419          409 VPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHG  488 (653)
Q Consensus       409 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~  488 (653)
                      | -|+-.++|.-.    +++|.+-.+..|+.+.++||.|||+   .+.||||||+.||||.+.|.+||+|||.|..... 
T Consensus       108 C-lGSAsDlleVh----kKplqEvEIAAi~~gaL~gLaYLHS---~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~P-  178 (948)
T KOG0577|consen  108 C-LGSASDLLEVH----KKPLQEVEIAAITHGALQGLAYLHS---HNRIHRDIKAGNILLSEPGLVKLADFGSASIMAP-  178 (948)
T ss_pred             H-hccHHHHHHHH----hccchHHHHHHHHHHHHHHHHHHHH---hhHHhhhccccceEecCCCeeeeccccchhhcCc-
Confidence            9 56888887654    5678999999999999999999999   8999999999999999999999999999987643 


Q ss_pred             CCCcccccccCCcccCccccc---cCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhh
Q 048419          489 ANPQTTHIVGTLGYLAPELTR---TGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAID  565 (653)
Q Consensus       489 ~~~~~~~~~gt~~y~aPE~~~---~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d  565 (653)
                          ...++||+.|||||++.   .+.|+-|+||||+|++..||.-.++|+..+.....+.-            +.+.-.
T Consensus       179 ----AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYH------------IAQNes  242 (948)
T KOG0577|consen  179 ----ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYH------------IAQNES  242 (948)
T ss_pred             ----hhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHH------------HHhcCC
Confidence                23468999999999874   57899999999999999999999999887665432210            111111


Q ss_pred             hccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          566 QTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       566 ~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                      |.|.  ..+-...+..++-.||+.-|.+|||..+++++---
T Consensus       243 PtLq--s~eWS~~F~~Fvd~CLqKipqeRptse~ll~H~fv  281 (948)
T KOG0577|consen  243 PTLQ--SNEWSDYFRNFVDSCLQKIPQERPTSEELLKHRFV  281 (948)
T ss_pred             CCCC--CchhHHHHHHHHHHHHhhCcccCCcHHHHhhcchh
Confidence            2221  12335678899999999999999999999976543

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=100.00  E-value=3.7e-35  Score=300.69  Aligned_cols=257  Identities=23%  Similarity=0.361  Sum_probs=199.2

Q ss_pred             cCcceeeeeeCcEEEEEEEeC---CCCcEEEEEEeccC--chhhHHHHHHHHHHHhhcCCCceeeeeeeecccc------
Q 048419          332 FGEQNLVGSGGFGRVYRGLMP---SLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQD------  400 (653)
Q Consensus       332 f~~~~~LG~G~fg~Vy~~~~~---~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~------  400 (653)
                      |...+.||+|+||.||+|.+.   .+++.||||++...  .....+++.+|++.+++++||||+++++++...+      
T Consensus         1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   80 (273)
T cd05074           1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP   80 (273)
T ss_pred             CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence            456788999999999999864   34689999998654  3445677899999999999999999999885532      


Q ss_pred             eeEEEEeccCCCCchhhhhcccc-cccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEee
Q 048419          401 ELLLVYDYVPNGSLDKLLFDKDH-KLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDF  479 (653)
Q Consensus       401 ~~~lV~E~~~~gsL~~~l~~~~~-~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df  479 (653)
                      ..++++||+++|+|..++..... .....+++...++++.|++.||+|||+   ++|+||||||+||+++.++.+||+||
T Consensus        81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~nili~~~~~~kl~df  157 (273)
T cd05074          81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSS---KNFIHRDLAARNCMLNENMTVCVADF  157 (273)
T ss_pred             ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCEeecccchhhEEEcCCCCEEECcc
Confidence            24789999999999988754321 112347888999999999999999999   89999999999999999999999999


Q ss_pred             cCcccccCCCC-CcccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhhcc
Q 048419          480 GLAKIYEHGAN-PQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELHLE  557 (653)
Q Consensus       480 Gla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~  557 (653)
                      |+++....... .......++..|++||.+....++.++|||||||++|||++ |+.|+.......   +..+....   
T Consensus       158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~---~~~~~~~~---  231 (273)
T cd05074         158 GLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSE---IYNYLIKG---  231 (273)
T ss_pred             cccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHH---HHHHHHcC---
Confidence            99986543221 11222345678999999988889999999999999999999 888886543321   11111111   


Q ss_pred             cchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          558 GEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       558 ~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                      ..        + .........+.+++.+||+.+|++||++.|+++.|+.
T Consensus       232 ~~--------~-~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~  271 (273)
T cd05074         232 NR--------L-KQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLEL  271 (273)
T ss_pred             Cc--------C-CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHh
Confidence            00        0 0111234678999999999999999999999999974

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=100.00  E-value=4.9e-35  Score=302.16  Aligned_cols=256  Identities=27%  Similarity=0.367  Sum_probs=209.3

Q ss_pred             HhhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEE
Q 048419          327 SVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVY  406 (653)
Q Consensus       327 ~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  406 (653)
                      ..+++|+..+.||+|++|.||+|.+..++..+++|++..... ..+.+.+|++.+++++|+|++++++.+...+..++|+
T Consensus        16 ~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~   94 (286)
T cd06614          16 DPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVM   94 (286)
T ss_pred             CccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEE
Confidence            456778888999999999999999988899999999976544 5677889999999999999999999999999999999


Q ss_pred             eccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccccc
Q 048419          407 DYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE  486 (653)
Q Consensus       407 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~  486 (653)
                      ||+++++|.+++....    ..+++.+++.++.|++.||.|||+   .+++|+||+|+||+++.++.+||+|||++....
T Consensus        95 e~~~~~~L~~~l~~~~----~~l~~~~~~~i~~~i~~~L~~lH~---~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~  167 (286)
T cd06614          95 EYMDGGSLTDIITQNF----VRMNEPQIAYVCREVLQGLEYLHS---QNVIHRDIKSDNILLSKDGSVKLADFGFAAQLT  167 (286)
T ss_pred             eccCCCcHHHHHHHhc----cCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCChhhEEEcCCCCEEECccchhhhhc
Confidence            9999999999997643    258999999999999999999999   999999999999999999999999999987554


Q ss_pred             CCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhh
Q 048419          487 HGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQ  566 (653)
Q Consensus       487 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  566 (653)
                      .... ......++..|++||.+.+..++.++||||||+++|||++|+.|+..........  ....     .....    
T Consensus       168 ~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~--~~~~-----~~~~~----  235 (286)
T cd06614         168 KEKS-KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALF--LITT-----KGIPP----  235 (286)
T ss_pred             cchh-hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHH--HHHh-----cCCCC----
Confidence            3221 1223457889999999988889999999999999999999999987544322111  0000     00000    


Q ss_pred             ccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          567 TLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       567 ~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                       + .........+.+++.+||+.+|.+||++.+++++.
T Consensus       236 -~-~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~  271 (286)
T cd06614         236 -L-KNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQHP  271 (286)
T ss_pred             -C-cchhhCCHHHHHHHHHHhccChhhCcCHHHHhhCh
Confidence             0 00111345688999999999999999999999754

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=100.00  E-value=3.1e-35  Score=303.03  Aligned_cols=262  Identities=26%  Similarity=0.331  Sum_probs=200.9

Q ss_pred             cCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc--hhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEecc
Q 048419          332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS--QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYV  409 (653)
Q Consensus       332 f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~  409 (653)
                      |+..+.||.|++|.||+|.+..+|..||+|++....  ....+.+.+|++.+++++|+|++++++++.+.+..+++|||+
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~   80 (283)
T cd07835           1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL   80 (283)
T ss_pred             CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence            566789999999999999998889999999986543  223467889999999999999999999999999999999999


Q ss_pred             CCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCC
Q 048419          410 PNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGA  489 (653)
Q Consensus       410 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~  489 (653)
                      + ++|.+++....   ...+++..+++++.|+++||.|||+   ++++|+||+|+||+++.++.++|+|||++.......
T Consensus        81 ~-~~l~~~~~~~~---~~~~~~~~~~~~~~~i~~~L~~lH~---~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~  153 (283)
T cd07835          81 D-LDLKKYMDSSP---LTGLDPPLIKSYLYQLLQGIAYCHS---HRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPV  153 (283)
T ss_pred             C-cCHHHHHhhCC---CCCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCc
Confidence            5 68999886643   2358999999999999999999999   899999999999999999999999999997654322


Q ss_pred             CCcccccccCCcccCccccccC-CCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccc--------h
Q 048419          490 NPQTTHIVGTLGYLAPELTRTG-KATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGE--------I  560 (653)
Q Consensus       490 ~~~~~~~~gt~~y~aPE~~~~~-~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~--------~  560 (653)
                      . ......++..|+|||++.+. .++.++||||||+++|||++|+.||........  +.+..........        +
T Consensus       154 ~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~  230 (283)
T cd07835         154 R-TYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQ--LFRIFRTLGTPDEDVWPGVTSL  230 (283)
T ss_pred             c-ccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHHHhCCCChHHhhhhhhc
Confidence            1 11223567899999987654 468899999999999999999999975543222  1111111100000        0


Q ss_pred             hHhhhh-------ccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 048419          561 TQAIDQ-------TLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEF  603 (653)
Q Consensus       561 ~~~~d~-------~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  603 (653)
                      .+....       .+..........+.+++.+||+.+|.+||++.|++++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~  280 (283)
T cd07835         231 PDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQH  280 (283)
T ss_pred             hhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence            000000       0000011123578899999999999999999999865

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=5.2e-36  Score=316.10  Aligned_cols=246  Identities=22%  Similarity=0.374  Sum_probs=201.2

Q ss_pred             cceeeeeeCcEEEEEEEeCCCCcEEEEEEecc----CchhhHHHHHHHHHHHhhcCCCceeeeeeeecccce--eEEEEe
Q 048419          334 EQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGH----NSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDE--LLLVYD  407 (653)
Q Consensus       334 ~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~----~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~--~~lV~E  407 (653)
                      ...+||+|.|-+||||.+..+|.+||--.++.    ......+.|..|+.+|+.|+|+||++++.++.+...  +-+|+|
T Consensus        44 ~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTE  123 (632)
T KOG0584|consen   44 FDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITE  123 (632)
T ss_pred             hhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeee
Confidence            35579999999999999999999998655432    245566899999999999999999999998877654  789999


Q ss_pred             ccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcC-CCcEEEEeecCccccc
Q 048419          408 YVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDT-YLNAKLGDFGLAKIYE  486 (653)
Q Consensus       408 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~-~~~~kl~DfGla~~~~  486 (653)
                      .|..|+|..|+.+..     ..+.+.+..|++||++||.|||++ .++|+|||||.+||||+. -|.+||+|+|||+...
T Consensus       124 L~TSGtLr~Y~kk~~-----~vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r  197 (632)
T KOG0584|consen  124 LFTSGTLREYRKKHR-----RVNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLR  197 (632)
T ss_pred             cccCCcHHHHHHHhc-----cCCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHHHHhh
Confidence            999999999998764     378889999999999999999995 479999999999999965 5899999999999875


Q ss_pred             CCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhh
Q 048419          487 HGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQ  566 (653)
Q Consensus       487 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  566 (653)
                      ...   .....|||.|||||... ..|++..||||||++|+||+|+..||..-....+      +.+....|..+..+..
T Consensus       198 ~s~---aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQ------IYKKV~SGiKP~sl~k  267 (632)
T KOG0584|consen  198 KSH---AKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQ------IYKKVTSGIKPAALSK  267 (632)
T ss_pred             ccc---cceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHH------HHHHHHcCCCHHHhhc
Confidence            432   23368999999999887 6899999999999999999999999986554332      1222223333333222


Q ss_pred             ccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 048419          567 TLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEF  603 (653)
Q Consensus       567 ~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  603 (653)
                      .       ...++.++|.+|+.. ..+|||+.|++..
T Consensus       268 V-------~dPevr~fIekCl~~-~~~R~sa~eLL~d  296 (632)
T KOG0584|consen  268 V-------KDPEVREFIEKCLAT-KSERLSAKELLKD  296 (632)
T ss_pred             c-------CCHHHHHHHHHHhcC-chhccCHHHHhhC
Confidence            1       125688999999999 9999999999973

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=100.00  E-value=1.1e-34  Score=304.53  Aligned_cols=256  Identities=27%  Similarity=0.373  Sum_probs=203.4

Q ss_pred             cCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC---chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEec
Q 048419          332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN---SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDY  408 (653)
Q Consensus       332 f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~  408 (653)
                      |...+.||+|+||.||+++...++..+|+|++...   ..+..+.+.+|++.+++++|+|+++++++|.+.+..++||||
T Consensus        27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  106 (317)
T cd06635          27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEY  106 (317)
T ss_pred             hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeC
Confidence            55678899999999999999888999999998643   233456788999999999999999999999999999999999


Q ss_pred             cCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCC
Q 048419          409 VPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHG  488 (653)
Q Consensus       409 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~  488 (653)
                      ++ |+|.+++...    ...+++.++..++.|++.||.|||+   ++++|+||+|+||+++.++.+||+|||++..... 
T Consensus       107 ~~-g~l~~~~~~~----~~~l~~~~~~~i~~~i~~~l~~lH~---~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~-  177 (317)
T cd06635         107 CL-GSASDLLEVH----KKPLQEVEIAAITHGALQGLAYLHS---HNMIHRDIKAGNILLTEPGQVKLADFGSASIASP-  177 (317)
T ss_pred             CC-CCHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcccEEECCCCCEEEecCCCccccCC-
Confidence            97 4787777543    2358999999999999999999999   8999999999999999999999999999875432 


Q ss_pred             CCCcccccccCCcccCccccc---cCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhh
Q 048419          489 ANPQTTHIVGTLGYLAPELTR---TGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAID  565 (653)
Q Consensus       489 ~~~~~~~~~gt~~y~aPE~~~---~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d  565 (653)
                          .....++..|+|||.+.   ...++.++|||||||++|||++|+.|+........  +..+.....          
T Consensus       178 ----~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~--~~~~~~~~~----------  241 (317)
T cd06635         178 ----ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA--LYHIAQNES----------  241 (317)
T ss_pred             ----cccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHH--HHHHHhccC----------
Confidence                12346788999999873   45688999999999999999999999875432211  111111000          


Q ss_pred             hccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcCCCCCCCCC
Q 048419          566 QTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLGDSSLPPLP  614 (653)
Q Consensus       566 ~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~p~~p  614 (653)
                      +  ..........+.+++.+||+.+|.+||++.++++++......+..+
T Consensus       242 ~--~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~~~~  288 (317)
T cd06635         242 P--TLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLRERPETV  288 (317)
T ss_pred             C--CCCCccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhccCcccc
Confidence            0  0011123456889999999999999999999999876655444433

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=100.00  E-value=4.7e-35  Score=303.56  Aligned_cols=267  Identities=21%  Similarity=0.276  Sum_probs=200.0

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc--hhhHHHHHHHHHHHhhcC-CCceeeeeeeecccce-----
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS--QQGMKEFVAEIMSMGRLR-HRNLVQLHGWCRKQDE-----  401 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~-----  401 (653)
                      ++|+..+.||+|+||.||+|.+..+++.||||.+....  ......+.+|+.++++++ |+||+++++++...+.     
T Consensus         1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~   80 (295)
T cd07837           1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS   80 (295)
T ss_pred             CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence            46888999999999999999999889999999986542  223457888999999995 6999999999877665     


Q ss_pred             eEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcC-CCcEEEEeec
Q 048419          402 LLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDT-YLNAKLGDFG  480 (653)
Q Consensus       402 ~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~-~~~~kl~DfG  480 (653)
                      .++||||+++ +|.+++..........+++.+++.++.||++||.|||+   ++++||||||+||+++. ++.+||+|||
T Consensus        81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~---~~i~H~dl~~~nil~~~~~~~~kl~dfg  156 (295)
T cd07837          81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHK---HGVMHRDLKPQNLLVDKQKGLLKIADLG  156 (295)
T ss_pred             EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCChHHEEEecCCCeEEEeecc
Confidence            8999999985 89888866433223468999999999999999999999   89999999999999998 8999999999


Q ss_pred             CcccccCCCCCcccccccCCcccCcccccc-CCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhccc-
Q 048419          481 LAKIYEHGANPQTTHIVGTLGYLAPELTRT-GKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEG-  558 (653)
Q Consensus       481 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~-  558 (653)
                      +++....... ......+++.|+|||++.+ ..++.++||||||+++|||++|..||.........  ........... 
T Consensus       157 ~~~~~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~--~~~~~~~~~~~~  233 (295)
T cd07837         157 LGRAFSIPVK-SYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQL--LHIFKLLGTPTE  233 (295)
T ss_pred             cceecCCCcc-ccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHH--HHHHHHhCCCCh
Confidence            9886533211 1122356788999998865 45789999999999999999999999765432221  11111000000 


Q ss_pred             ch-hHhh--------h----hccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 048419          559 EI-TQAI--------D----QTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEF  603 (653)
Q Consensus       559 ~~-~~~~--------d----~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  603 (653)
                      .. ....        .    ..+..........+.+++.+||+.||.+||++.|++.+
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~  291 (295)
T cd07837         234 QVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTH  291 (295)
T ss_pred             hhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence            00 0000        0    00000001234668899999999999999999999865

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=100.00  E-value=2.3e-37  Score=298.03  Aligned_cols=250  Identities=26%  Similarity=0.385  Sum_probs=209.8

Q ss_pred             cCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEeccCC
Q 048419          332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPN  411 (653)
Q Consensus       332 f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~  411 (653)
                      |.+..+||+|+||.|||+.++.+|+.+|||.+...  .+.+++..|+.+|++++.+++|+++|.+.....+|+|||||.-
T Consensus        35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~--sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGA  112 (502)
T KOG0574|consen   35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD--TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGA  112 (502)
T ss_pred             HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc--chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCC
Confidence            55678899999999999999999999999998544  4578899999999999999999999999999999999999999


Q ss_pred             CCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCCCC
Q 048419          412 GSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANP  491 (653)
Q Consensus       412 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~  491 (653)
                      |++.+.+..+    +++|++.++..+++.-+.||+|||.   ..-+|||||+.||||+.+|.+||+|||.|..+.... .
T Consensus       113 GSiSDI~R~R----~K~L~E~EIs~iL~~TLKGL~YLH~---~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTM-A  184 (502)
T KOG0574|consen  113 GSISDIMRAR----RKPLSEQEISAVLRDTLKGLQYLHD---LKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTM-A  184 (502)
T ss_pred             CcHHHHHHHh----cCCccHHHHHHHHHHHHhHHHHHHH---HHHHHhhcccccEEEcccchhhhhhccccchhhhhH-H
Confidence            9999999765    5779999999999999999999999   788999999999999999999999999998654321 2


Q ss_pred             cccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhccCcC
Q 048419          492 QTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYY  571 (653)
Q Consensus       492 ~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~  571 (653)
                      ....+.||+.|||||++..-.|+.++||||+|++..||..|++||..-.+.....            .+.....+.. ..
T Consensus       185 KRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIF------------MIPT~PPPTF-~K  251 (502)
T KOG0574|consen  185 KRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIF------------MIPTKPPPTF-KK  251 (502)
T ss_pred             hhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeE------------eccCCCCCCC-CC
Confidence            2345689999999999999999999999999999999999999998543321110            0000001111 11


Q ss_pred             CHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          572 DLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       572 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                      +..-...+.+++..||-..|++|-|+.+++++-
T Consensus       252 PE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H~  284 (502)
T KOG0574|consen  252 PEEWSSEFNDFIRSCLIKKPEERKTALRLCEHT  284 (502)
T ss_pred             hHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhhh
Confidence            233357799999999999999999999999864

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=100.00  E-value=5.7e-35  Score=302.77  Aligned_cols=265  Identities=23%  Similarity=0.284  Sum_probs=201.2

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCch--hhHHHHHHHHHHHhhcCCCceeeeeeeeccc--ceeEEE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQ--QGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQ--DELLLV  405 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~--~~~~lV  405 (653)
                      ++|+..+.||+|+||.||+|....+++.+|+|.++....  .....+.+|+.++++++||||+++++++...  +..++|
T Consensus         5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv   84 (293)
T cd07843           5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV   84 (293)
T ss_pred             hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence            467888999999999999999998899999999965432  2234567899999999999999999998777  789999


Q ss_pred             EeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccc
Q 048419          406 YDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIY  485 (653)
Q Consensus       406 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~  485 (653)
                      +||++ ++|.+++....    ..+++.+++.++.||+.||.|||+   .+++|+||||+||+++.++.+||+|||++...
T Consensus        85 ~e~~~-~~L~~~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~---~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~  156 (293)
T cd07843          85 MEYVE-HDLKSLMETMK----QPFLQSEVKCLMLQLLSGVAHLHD---NWILHRDLKTSNLLLNNRGILKICDFGLAREY  156 (293)
T ss_pred             ehhcC-cCHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCCHHHEEECCCCcEEEeecCceeec
Confidence            99997 49988886543    358999999999999999999999   89999999999999999999999999999866


Q ss_pred             cCCCCCcccccccCCcccCccccccC-CCCCccceeehHHHHHHHHhCCCCCChhhhhhHHH-HHHHH-------Hhhhc
Q 048419          486 EHGANPQTTHIVGTLGYLAPELTRTG-KATTSTDVYSYGILMLEVACGRRSIEPQKAAAELL-LVDWV-------KELHL  556 (653)
Q Consensus       486 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~-l~~~~-------~~~~~  556 (653)
                      .... .......++..|+|||.+.+. .++.++||||||++++||++|+.||.......... +...+       +....
T Consensus       157 ~~~~-~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (293)
T cd07843         157 GSPL-KPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFS  235 (293)
T ss_pred             cCCc-cccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhh
Confidence            4432 122234578899999988754 46889999999999999999999997554322111 00000       00000


Q ss_pred             c------cchhHhhhhcc-CcCCHH-HHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 048419          557 E------GEITQAIDQTL-DYYDLA-EAELVLNLGLFCSAPNPVYRPDMRRVVEF  603 (653)
Q Consensus       557 ~------~~~~~~~d~~l-~~~~~~-~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  603 (653)
                      .      ..........+ ..+... ..+.+.+++..||+.+|++|||+.|++++
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~  290 (293)
T cd07843         236 ELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKH  290 (293)
T ss_pred             ccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcC
Confidence            0      00000000001 011111 25668899999999999999999999874

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=100.00  E-value=6.2e-35  Score=295.60  Aligned_cols=251  Identities=27%  Similarity=0.400  Sum_probs=207.7

Q ss_pred             CcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC--chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEec
Q 048419          331 GFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDY  408 (653)
Q Consensus       331 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~  408 (653)
                      +|+..+.||+|++|.||++....+++.+++|.+...  ......++.+|++.+++++|+||+++++++......++|+||
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~   80 (256)
T cd08530           1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY   80 (256)
T ss_pred             CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence            477789999999999999999888999999998654  234456788999999999999999999999999999999999


Q ss_pred             cCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCC
Q 048419          409 VPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHG  488 (653)
Q Consensus       409 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~  488 (653)
                      +++++|.+++...... ...+++..++.++.|++.||.|||+   .+++|+||+|+||++++++.+||+|||++......
T Consensus        81 ~~~~~L~~~~~~~~~~-~~~~~~~~~~~~~~~l~~al~~lh~---~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~  156 (256)
T cd08530          81 APFGDLSKAISKRKKK-RKLIPEQEIWRIFIQLLRGLQALHE---QKILHRDLKSANILLVANDLVKIGDLGISKVLKKN  156 (256)
T ss_pred             cCCCCHHHHHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCcceEEEecCCcEEEeeccchhhhccC
Confidence            9999999998764321 3458899999999999999999999   89999999999999999999999999999876543


Q ss_pred             CCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhcc
Q 048419          489 ANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTL  568 (653)
Q Consensus       489 ~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l  568 (653)
                         ......++..|++||.+.+..++.++|+||||++++||++|+.||.......   +...+.    .+..        
T Consensus       157 ---~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~---~~~~~~----~~~~--------  218 (256)
T cd08530         157 ---MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQD---LRYKVQ----RGKY--------  218 (256)
T ss_pred             ---CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHh----cCCC--------
Confidence               2223457889999999998889999999999999999999999997654321   111111    1111        


Q ss_pred             CcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 048419          569 DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEF  603 (653)
Q Consensus       569 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  603 (653)
                      ..........+.+++.+|++.+|.+||++.+++++
T Consensus       219 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~  253 (256)
T cd08530         219 PPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILAS  253 (256)
T ss_pred             CCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence            11122345678999999999999999999999875

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=100.00  E-value=5.8e-35  Score=303.90  Aligned_cols=269  Identities=25%  Similarity=0.310  Sum_probs=202.5

Q ss_pred             HhhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc--hhhHHHHHHHHHHHhhcCCCceeeeeeeecccc----
Q 048419          327 SVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS--QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQD----  400 (653)
Q Consensus       327 ~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~----  400 (653)
                      .+.++|+..+.||+|+||.||+|....+++.||+|+++...  ......+.+|++++++++|||++++++++.+..    
T Consensus         4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~   83 (302)
T cd07864           4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD   83 (302)
T ss_pred             hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence            45678889999999999999999999889999999996543  223456778999999999999999999987655    


Q ss_pred             ------eeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcE
Q 048419          401 ------ELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNA  474 (653)
Q Consensus       401 ------~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~  474 (653)
                            .+++|+||+++ +|..++...    ...+++.+++.++.||+.||+|||+   .+|+|+||||+||++++++.+
T Consensus        84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~----~~~~~~~~~~~i~~qi~~aL~~LH~---~~i~H~dl~p~nili~~~~~~  155 (302)
T cd07864          84 FKKDKGAFYLVFEYMDH-DLMGLLESG----LVHFSEDHIKSFMKQLLEGLNYCHK---KNFLHRDIKCSNILLNNKGQI  155 (302)
T ss_pred             ccccCCcEEEEEcccCc-cHHHHHhcC----CCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCcE
Confidence                  78999999976 777776543    2358999999999999999999999   899999999999999999999


Q ss_pred             EEEeecCcccccCCCCCcccccccCCcccCcccccc-CCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHh
Q 048419          475 KLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRT-GKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKE  553 (653)
Q Consensus       475 kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~  553 (653)
                      ||+|||++...............++..|+|||.+.+ ..++.++|||||||+++||++|+.||.................
T Consensus       156 kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~  235 (302)
T cd07864         156 KLADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCG  235 (302)
T ss_pred             EeCcccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhC
Confidence            999999998765433222222346778999998764 3578899999999999999999999976543322211111100


Q ss_pred             hhcccchhHh--------hhh------ccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 048419          554 LHLEGEITQA--------IDQ------TLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEF  603 (653)
Q Consensus       554 ~~~~~~~~~~--------~d~------~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  603 (653)
                      .........+        .+.      ............+.+++..||+.+|.+||++.+++++
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~  299 (302)
T cd07864         236 SPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNS  299 (302)
T ss_pred             CCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence            0000000000        000      0000000124678999999999999999999999865

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=100.00  E-value=9.4e-35  Score=298.72  Aligned_cols=245  Identities=25%  Similarity=0.315  Sum_probs=195.5

Q ss_pred             eeeeCcEEEEEEEeCCCCcEEEEEEeccCc---hhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEeccCCCCc
Q 048419          338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNS---QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSL  414 (653)
Q Consensus       338 LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL  414 (653)
                      ||+|+||+||++....+|+.||+|.+....   ......+..|++++++++|||++++++++...+..++||||+++++|
T Consensus         1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (277)
T cd05577           1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL   80 (277)
T ss_pred             CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence            689999999999998889999999986432   22345677899999999999999999999999999999999999999


Q ss_pred             hhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCCCCccc
Q 048419          415 DKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTT  494 (653)
Q Consensus       415 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~  494 (653)
                      .+++....   ...+++.+++.++.|++.||.|||+   .+++|+||+|+||++++++.+||+|||++.......  ...
T Consensus        81 ~~~l~~~~---~~~~~~~~~~~~~~ql~~~l~~lH~---~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~--~~~  152 (277)
T cd05577          81 KYHIYNVG---EPGFPEARAIFYAAQIICGLEHLHQ---RRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGK--KIK  152 (277)
T ss_pred             HHHHHHcC---cCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEEEccCcchhhhccCC--ccc
Confidence            99997654   2358899999999999999999999   899999999999999999999999999988654322  222


Q ss_pred             ccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhccCcCCHH
Q 048419          495 HIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYYDLA  574 (653)
Q Consensus       495 ~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~  574 (653)
                      ...++..|+|||.+.+..++.++|||||||++++|++|+.||..........   .+...         ...........
T Consensus       153 ~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~---~~~~~---------~~~~~~~~~~~  220 (277)
T cd05577         153 GRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKE---ELKRR---------TLEMAVEYPDK  220 (277)
T ss_pred             cccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHH---HHHhc---------cccccccCCcc
Confidence            3457889999999988889999999999999999999999997543311000   00000         00000111112


Q ss_pred             HHHHHHHHHHHcCCCCCCCCC-----CHHHHHH
Q 048419          575 EAELVLNLGLFCSAPNPVYRP-----DMRRVVE  602 (653)
Q Consensus       575 ~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~  602 (653)
                      ....+.+++.+||+.+|.+||     ++.++++
T Consensus       221 ~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~  253 (277)
T cd05577         221 FSPEAKDLCEALLQKDPEKRLGCRGGSADEVRE  253 (277)
T ss_pred             CCHHHHHHHHHHccCChhHccCCCcccHHHHHh
Confidence            346788999999999999999     6666665

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=100.00  E-value=7.9e-35  Score=294.65  Aligned_cols=253  Identities=24%  Similarity=0.402  Sum_probs=208.4

Q ss_pred             CcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc--hhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEec
Q 048419          331 GFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS--QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDY  408 (653)
Q Consensus       331 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~  408 (653)
                      +|+..+.||+|+||.||++....++..+++|++....  ....+.+.+|++.+++++|+|++++++.+...+..++|+||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~   80 (258)
T cd08215           1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY   80 (258)
T ss_pred             CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence            4777899999999999999998889999999997653  35567889999999999999999999999999999999999


Q ss_pred             cCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCC
Q 048419          409 VPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHG  488 (653)
Q Consensus       409 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~  488 (653)
                      +++++|.+++...... ...+++.++..++.++++||.|||+   .+++|+||+|+||+++.++.++|+|||++......
T Consensus        81 ~~~~~L~~~l~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lh~---~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~  156 (258)
T cd08215          81 ADGGDLSQKIKKQKKE-GKPFPEEQILDWFVQLCLALKYLHS---RKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSST  156 (258)
T ss_pred             cCCCcHHHHHHHhhcc-CCCcCHHHHHHHHHHHHHHHHHHHh---CCEecccCChHHeEEcCCCcEEECCccceeecccC
Confidence            9999999999765321 3568999999999999999999999   89999999999999999999999999999876543


Q ss_pred             CCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhcc
Q 048419          489 ANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTL  568 (653)
Q Consensus       489 ~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l  568 (653)
                      . .......|++.|+|||......++.++||||+|+++++|++|+.|+.......   +.   .... ...        +
T Consensus       157 ~-~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~---~~---~~~~-~~~--------~  220 (258)
T cd08215         157 V-DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLE---LA---LKIL-KGQ--------Y  220 (258)
T ss_pred             c-ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHH---HH---HHHh-cCC--------C
Confidence            2 12233468889999999988889999999999999999999999997554221   11   1100 000        1


Q ss_pred             CcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 048419          569 DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEF  603 (653)
Q Consensus       569 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  603 (653)
                      ...+......+.+++.+||+.+|.+||++.+++++
T Consensus       221 ~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~  255 (258)
T cd08215         221 PPIPSQYSSELRNLVSSLLQKDPEERPSIAQILQS  255 (258)
T ss_pred             CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence            11111234678899999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=100.00  E-value=8.5e-35  Score=299.56  Aligned_cols=244  Identities=23%  Similarity=0.293  Sum_probs=189.8

Q ss_pred             eeeeeCcEEEEEEEeCCCCcEEEEEEeccCc---hhhHHHHHHHHHHHh---hcCCCceeeeeeeecccceeEEEEeccC
Q 048419          337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS---QQGMKEFVAEIMSMG---RLRHRNLVQLHGWCRKQDELLLVYDYVP  410 (653)
Q Consensus       337 ~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~---~l~H~niv~l~g~~~~~~~~~lV~E~~~  410 (653)
                      +||+|+||.||++....+++.+|+|.+....   ......+.+|..+++   ..+|+|++.+++++...+..++||||++
T Consensus         1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~   80 (279)
T cd05633           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN   80 (279)
T ss_pred             CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence            4899999999999998889999999986532   122233444544333   3479999999999999999999999999


Q ss_pred             CCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCCC
Q 048419          411 NGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGAN  490 (653)
Q Consensus       411 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~  490 (653)
                      +++|.+++...     ..+++.++..++.|++.||.|||+   ++++|+||||+||++++++.+||+|||++....... 
T Consensus        81 ~~~L~~~i~~~-----~~l~~~~~~~i~~qi~~al~~lH~---~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~-  151 (279)
T cd05633          81 GGDLHYHLSQH-----GVFSEKEMRFYATEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK-  151 (279)
T ss_pred             CCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCcCCCCCCHHHEEECCCCCEEEccCCcceeccccC-
Confidence            99999988654     348999999999999999999999   899999999999999999999999999987543321 


Q ss_pred             CcccccccCCcccCcccccc-CCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhccC
Q 048419          491 PQTTHIVGTLGYLAPELTRT-GKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLD  569 (653)
Q Consensus       491 ~~~~~~~gt~~y~aPE~~~~-~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~  569 (653)
                        .....|+..|+|||.+.+ ..++.++|||||||++|||++|+.||..........+....    .      ....   
T Consensus       152 --~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~----~------~~~~---  216 (279)
T cd05633         152 --PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMT----L------TVNV---  216 (279)
T ss_pred             --ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHh----h------cCCc---
Confidence              223468999999998864 45789999999999999999999999754322111111000    0      0000   


Q ss_pred             cCCHHHHHHHHHHHHHcCCCCCCCCC-----CHHHHHHHH
Q 048419          570 YYDLAEAELVLNLGLFCSAPNPVYRP-----DMRRVVEFL  604 (653)
Q Consensus       570 ~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~L  604 (653)
                      ..+......+.+++.+||+.||.+||     +++|++++.
T Consensus       217 ~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~  256 (279)
T cd05633         217 ELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHV  256 (279)
T ss_pred             CCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCc
Confidence            11122346788999999999999999     699999875

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=100.00  E-value=8.2e-35  Score=303.71  Aligned_cols=264  Identities=24%  Similarity=0.339  Sum_probs=199.0

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc--hhhHHHHHHHHHHHhhcCCCceeeeeeeecccc-------
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS--QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQD-------  400 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~-------  400 (653)
                      ++|+..+.||+|+||.||+|....+++.||||.+....  ......+.+|+.++++++||||++++++|...+       
T Consensus        12 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   91 (310)
T cd07865          12 SKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYK   91 (310)
T ss_pred             hheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCC
Confidence            46888999999999999999999899999999986432  222345678999999999999999999986654       


Q ss_pred             -eeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEee
Q 048419          401 -ELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDF  479 (653)
Q Consensus       401 -~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df  479 (653)
                       ..++||||+.+ +|.+++....    ..+++.+++.++.||+.||.|||+   ++++|+||||+||+++.++.+||+||
T Consensus        92 ~~~~lv~e~~~~-~l~~~l~~~~----~~~~~~~~~~i~~qi~~al~~lH~---~~i~H~dl~p~nil~~~~~~~kl~df  163 (310)
T cd07865          92 GSFYLVFEFCEH-DLAGLLSNKN----VKFTLSEIKKVMKMLLNGLYYIHR---NKILHRDMKAANILITKDGILKLADF  163 (310)
T ss_pred             ceEEEEEcCCCc-CHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEECCCCcEEECcC
Confidence             45999999964 8888775532    348999999999999999999999   89999999999999999999999999


Q ss_pred             cCcccccCCCCC---cccccccCCcccCccccccC-CCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhh
Q 048419          480 GLAKIYEHGANP---QTTHIVGTLGYLAPELTRTG-KATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELH  555 (653)
Q Consensus       480 Gla~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~-~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~  555 (653)
                      |++.........   ......++..|+|||.+.+. .++.++||||||+++|||++|+.|+..............+....
T Consensus       164 g~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~  243 (310)
T cd07865         164 GLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSI  243 (310)
T ss_pred             CCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCC
Confidence            999865432211   11234577899999988664 36889999999999999999999997655433322222221110


Q ss_pred             cccchh-----H-------------hhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 048419          556 LEGEIT-----Q-------------AIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEF  603 (653)
Q Consensus       556 ~~~~~~-----~-------------~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  603 (653)
                      ......     +             .+...+.  .......+.+++.+||+.||.+||++.|++++
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h  307 (310)
T cd07865         244 TPEVWPGVDKLELFKKMELPQGQKRKVKERLK--PYVKDPHALDLIDKLLVLDPAKRIDADTALNH  307 (310)
T ss_pred             ChhhcccccchhhhhhccCCCccchhhHHhcc--cccCCHHHHHHHHHHhcCChhhccCHHHHhcC
Confidence            000000     0             0000000  00123457799999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=100.00  E-value=1.3e-34  Score=302.57  Aligned_cols=268  Identities=28%  Similarity=0.328  Sum_probs=202.1

Q ss_pred             hcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCch--hhHHHHHHHHHHHhhcCCCceeeeeeeeccc--ceeEE
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQ--QGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQ--DELLL  404 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~--~~~~l  404 (653)
                      .++|+..+.||+|+||.||+|....+|+.||+|++.....  .....+.+|+.++++++|+|++++++++...  +..++
T Consensus         6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   85 (309)
T cd07845           6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL   85 (309)
T ss_pred             ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence            3578889999999999999999998899999999864422  2233567899999999999999999998655  46899


Q ss_pred             EEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccc
Q 048419          405 VYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKI  484 (653)
Q Consensus       405 V~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~  484 (653)
                      ||||+. ++|.+++....    ..+++.+++.++.||++||+|||+   .+++|+||||+||++++++.+||+|||++..
T Consensus        86 v~e~~~-~~l~~~l~~~~----~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~  157 (309)
T cd07845          86 VMEYCE-QDLASLLDNMP----TPFSESQVKCLMLQLLRGLQYLHE---NFIIHRDLKVSNLLLTDKGCLKIADFGLART  157 (309)
T ss_pred             EEecCC-CCHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEECccceeee
Confidence            999996 48888876532    458999999999999999999999   8999999999999999999999999999987


Q ss_pred             ccCCCCCcccccccCCcccCcccccc-CCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHH-HHHHhhhcccchhH
Q 048419          485 YEHGANPQTTHIVGTLGYLAPELTRT-GKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLV-DWVKELHLEGEITQ  562 (653)
Q Consensus       485 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~-~~~~~~~~~~~~~~  562 (653)
                      ..... .......++..|+|||.+.+ ..++.++|||||||++|||++|+.||............ +.... . ......
T Consensus       158 ~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~-~-~~~~~~  234 (309)
T cd07845         158 YGLPA-KPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGT-P-NESIWP  234 (309)
T ss_pred             cCCcc-CCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCC-C-Chhhch
Confidence            64322 11222345788999998865 45789999999999999999999999765443221111 10000 0 000000


Q ss_pred             hhh-------hccCcC--------CHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcCC
Q 048419          563 AID-------QTLDYY--------DLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLGD  607 (653)
Q Consensus       563 ~~d-------~~l~~~--------~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  607 (653)
                      .++       ..+...        .....+.+.+++.+|++.||.+|||+.|++++-...
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f~  294 (309)
T cd07845         235 GFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFK  294 (309)
T ss_pred             hhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcChhhc
Confidence            000       000000        001246678999999999999999999999877543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=100.00  E-value=8.8e-35  Score=301.55  Aligned_cols=264  Identities=25%  Similarity=0.321  Sum_probs=199.1

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc--hhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEe
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS--QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYD  407 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E  407 (653)
                      ++|+..+.||+|++|.||+|....+++.||+|.+....  ....+.+.+|++++++++|+||+++++++...+..++|||
T Consensus         2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   81 (294)
T PLN00009          2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE   81 (294)
T ss_pred             CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence            46888999999999999999998889999999986542  2334678899999999999999999999999999999999


Q ss_pred             ccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcC-CCcEEEEeecCccccc
Q 048419          408 YVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDT-YLNAKLGDFGLAKIYE  486 (653)
Q Consensus       408 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~-~~~~kl~DfGla~~~~  486 (653)
                      |++ ++|.+++....   ...+++...+.++.||+.||+|||+   ++++|+||+|+||+++. ++.+||+|||++....
T Consensus        82 ~~~-~~l~~~~~~~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~  154 (294)
T PLN00009         82 YLD-LDLKKHMDSSP---DFAKNPRLIKTYLYQILRGIAYCHS---HRVLHRDLKPQNLLIDRRTNALKLADFGLARAFG  154 (294)
T ss_pred             ccc-ccHHHHHHhCC---CCCcCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCcceEEEECCCCEEEEcccccccccC
Confidence            996 57888775443   2235778888999999999999999   89999999999999985 5679999999997654


Q ss_pred             CCCCCcccccccCCcccCccccccC-CCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhc--cc-----
Q 048419          487 HGANPQTTHIVGTLGYLAPELTRTG-KATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHL--EG-----  558 (653)
Q Consensus       487 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~--~~-----  558 (653)
                      ... .......+++.|+|||++.+. .++.++|||||||++|+|+||+.||......+...  ........  ..     
T Consensus       155 ~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~--~~~~~~~~~~~~~~~~~  231 (294)
T PLN00009        155 IPV-RTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELF--KIFRILGTPNEETWPGV  231 (294)
T ss_pred             CCc-cccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH--HHHHHhCCCChhhcccc
Confidence            321 112234568899999988664 57889999999999999999999997654432211  11100000  00     


Q ss_pred             -chhHhhh-------hccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 048419          559 -EITQAID-------QTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEF  603 (653)
Q Consensus       559 -~~~~~~d-------~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  603 (653)
                       .+.....       ..+..........+.+++.+|++.+|++||++.+++++
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~  284 (294)
T PLN00009        232 TSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEH  284 (294)
T ss_pred             ccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcC
Confidence             0000000       00000011224568899999999999999999999974

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=100.00  E-value=1.1e-34  Score=298.36  Aligned_cols=258  Identities=21%  Similarity=0.241  Sum_probs=196.0

Q ss_pred             cCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc-hhhHHHHHHHHHHHhhcC-CCceeeeeeeeccc--ceeEEEEe
Q 048419          332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS-QQGMKEFVAEIMSMGRLR-HRNLVQLHGWCRKQ--DELLLVYD  407 (653)
Q Consensus       332 f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~--~~~~lV~E  407 (653)
                      |+..+.||+|+||.||+|....++..||+|++.... .........|+..+.++. |+|++++++++.+.  +.+++|+|
T Consensus         1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e   80 (282)
T cd07831           1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE   80 (282)
T ss_pred             CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence            456789999999999999998889999999986542 222234457888899885 99999999999887  88999999


Q ss_pred             ccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccC
Q 048419          408 YVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEH  487 (653)
Q Consensus       408 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~  487 (653)
                      |++ ++|.+++....    ..++|.+++.++.|++.||.|||+   .+++|+||+|+||+++. +.+||+|||+++....
T Consensus        81 ~~~-~~l~~~l~~~~----~~~~~~~~~~~~~qi~~~L~~LH~---~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~  151 (282)
T cd07831          81 LMD-MNLYELIKGRK----RPLPEKRVKSYMYQLLKSLDHMHR---NGIFHRDIKPENILIKD-DILKLADFGSCRGIYS  151 (282)
T ss_pred             cCC-ccHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHH---CCceecccCHHHEEEcC-CCeEEEeccccccccc
Confidence            997 58888776532    358999999999999999999999   89999999999999999 9999999999986643


Q ss_pred             CCCCcccccccCCcccCcccccc-CCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcc--cchhHhh
Q 048419          488 GANPQTTHIVGTLGYLAPELTRT-GKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLE--GEITQAI  564 (653)
Q Consensus       488 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~  564 (653)
                      ...  .....++..|+|||.+.. ..++.++|||||||++|||++|..||...+..+.   ..+.......  ..+....
T Consensus       152 ~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~  226 (282)
T cd07831         152 KPP--YTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQ---IAKIHDVLGTPDAEVLKKF  226 (282)
T ss_pred             CCC--cCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHH---HHHHHHHcCCCCHHHHHhh
Confidence            221  123457889999997644 5578899999999999999999999976543221   1111111000  0000000


Q ss_pred             h---------hcc-----CcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 048419          565 D---------QTL-----DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEF  603 (653)
Q Consensus       565 d---------~~l-----~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  603 (653)
                      .         +..     ..........+.+++.+||+.+|++||++.+++++
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~  279 (282)
T cd07831         227 RKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRH  279 (282)
T ss_pred             cccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhC
Confidence            0         000     00011235789999999999999999999999875

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=100.00  E-value=6.4e-35  Score=301.55  Aligned_cols=258  Identities=26%  Similarity=0.376  Sum_probs=197.8

Q ss_pred             CcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc-hhhHHHHHHHHHHHhhcC-CCceeeeeeeecccceeEEEEec
Q 048419          331 GFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS-QQGMKEFVAEIMSMGRLR-HRNLVQLHGWCRKQDELLLVYDY  408 (653)
Q Consensus       331 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lV~E~  408 (653)
                      +|...+.||+|+||.||++.+..+++.+|+|.+.... ......+.+|+..+.++. |+||+++++++...+..+++|||
T Consensus         5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~   84 (288)
T cd06616           5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMEL   84 (288)
T ss_pred             HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEec
Confidence            3445678999999999999999999999999986543 344567889999999996 99999999999998899999999


Q ss_pred             cCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCC
Q 048419          409 VPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHG  488 (653)
Q Consensus       409 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~  488 (653)
                      ++. +|.++...........+++.....++.|++.||+|||+.  .+++||||||+||+++.++.+||+|||+++.....
T Consensus        85 ~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~--~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~  161 (288)
T cd06616          85 MDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEE--LKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDS  161 (288)
T ss_pred             ccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhc--CCeeccCCCHHHEEEccCCcEEEeecchhHHhccC
Confidence            864 665543221111134588999999999999999999972  48999999999999999999999999999765432


Q ss_pred             CCCcccccccCCcccCccccccC---CCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhh
Q 048419          489 ANPQTTHIVGTLGYLAPELTRTG---KATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAID  565 (653)
Q Consensus       489 ~~~~~~~~~gt~~y~aPE~~~~~---~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d  565 (653)
                      .  ......|+..|+|||.+.+.   .++.++|||||||++|||++|+.||......     .+.+.... .+.     .
T Consensus       162 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-----~~~~~~~~-~~~-----~  228 (288)
T cd06616         162 I--AKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSV-----FDQLTQVV-KGD-----P  228 (288)
T ss_pred             C--ccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchH-----HHHHhhhc-CCC-----C
Confidence            2  11233578899999998766   6889999999999999999999999754311     11111110 000     0


Q ss_pred             hcc-CcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          566 QTL-DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       566 ~~l-~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                      +.+ ..........+.+++.+||+.+|.+||++.+|+++-
T Consensus       229 ~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~~  268 (288)
T cd06616         229 PILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEHP  268 (288)
T ss_pred             CcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcCh
Confidence            111 111122456789999999999999999999999864

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.5e-34  Score=292.34  Aligned_cols=249  Identities=28%  Similarity=0.432  Sum_probs=205.6

Q ss_pred             CcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCch--hhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEec
Q 048419          331 GFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQ--QGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDY  408 (653)
Q Consensus       331 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~  408 (653)
                      +|+..+.||+|++|.||++.....++.|++|.+.....  ...+.+.+|++++++++|+|++++++++.+.+..++++||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~   80 (254)
T cd06627           1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY   80 (254)
T ss_pred             CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence            46778999999999999999988899999999976543  4567899999999999999999999999999999999999


Q ss_pred             cCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCC
Q 048419          409 VPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHG  488 (653)
Q Consensus       409 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~  488 (653)
                      +++++|.+++...     ..+++..++.++.|++.+|.|||+   .+++|+||+|+||+++.++.+||+|||++......
T Consensus        81 ~~~~~L~~~~~~~-----~~l~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~  152 (254)
T cd06627          81 AENGSLRQIIKKF-----GPFPESLVAVYVYQVLQGLAYLHE---QGVIHRDIKAANILTTKDGVVKLADFGVATKLNDV  152 (254)
T ss_pred             CCCCcHHHHHHhc-----cCCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCHHHEEECCCCCEEEeccccceecCCC
Confidence            9999999998654     348999999999999999999999   89999999999999999999999999999876543


Q ss_pred             CCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhcc
Q 048419          489 ANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTL  568 (653)
Q Consensus       489 ~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l  568 (653)
                      ... .....++..|+|||...+..++.++|||++|+++++|++|+.|+.........  ...  .   ....        
T Consensus       153 ~~~-~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~--~~~--~---~~~~--------  216 (254)
T cd06627         153 SKD-DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAAL--FRI--V---QDDH--------  216 (254)
T ss_pred             ccc-ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHH--HHH--h---ccCC--------
Confidence            321 23346788999999998888899999999999999999999998754421110  000  0   0000        


Q ss_pred             CcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 048419          569 DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEF  603 (653)
Q Consensus       569 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  603 (653)
                      ...+......+.+++.+||+.+|++||++.+++.+
T Consensus       217 ~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~  251 (254)
T cd06627         217 PPLPEGISPELKDFLMQCFQKDPNLRPTAKQLLKH  251 (254)
T ss_pred             CCCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhcC
Confidence            01111224678899999999999999999999853

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=100.00  E-value=1.9e-34  Score=291.77  Aligned_cols=252  Identities=28%  Similarity=0.381  Sum_probs=207.7

Q ss_pred             CcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc--hhhHHHHHHHHHHHhhcCCCceeeeeeeeccc--ceeEEEE
Q 048419          331 GFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS--QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQ--DELLLVY  406 (653)
Q Consensus       331 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~--~~~~lV~  406 (653)
                      +|...+.||+|++|.||+|....++..|++|++....  ....+.+.+|+..+++++|+||+++++.+...  +..++++
T Consensus         1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~   80 (260)
T cd06606           1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL   80 (260)
T ss_pred             CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence            4677899999999999999999889999999986554  35577899999999999999999999999888  8899999


Q ss_pred             eccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccccc
Q 048419          407 DYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE  486 (653)
Q Consensus       407 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~  486 (653)
                      ||+++++|.+++....     .+++.+++.++.|++++|.|||+   .+++|+||+|+||+++.++.+||+|||.+....
T Consensus        81 e~~~~~~L~~~~~~~~-----~~~~~~~~~~~~~l~~~l~~lh~---~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~  152 (260)
T cd06606          81 EYVSGGSLSSLLKKFG-----KLPEPVIRKYTRQILEGLAYLHS---NGIVHRDIKGANILVDSDGVVKLADFGCAKRLG  152 (260)
T ss_pred             EecCCCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEcCCCCEEEcccccEEecc
Confidence            9999999999987643     58999999999999999999999   899999999999999999999999999998765


Q ss_pred             CCCCC-cccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhh
Q 048419          487 HGANP-QTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAID  565 (653)
Q Consensus       487 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d  565 (653)
                      ..... ......++..|+|||.+.....+.++||||||+++++|++|+.||........     ..........      
T Consensus       153 ~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~-----~~~~~~~~~~------  221 (260)
T cd06606         153 DIETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMA-----ALYKIGSSGE------  221 (260)
T ss_pred             cccccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHH-----HHHhccccCC------
Confidence            43321 12334678899999999888899999999999999999999999976542111     0111110000      


Q ss_pred             hccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 048419          566 QTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEF  603 (653)
Q Consensus       566 ~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  603 (653)
                        ....+......+.+++.+|++.+|.+||++.+++++
T Consensus       222 --~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~  257 (260)
T cd06606         222 --PPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQH  257 (260)
T ss_pred             --CcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhhC
Confidence              011122235678999999999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.6e-35  Score=312.65  Aligned_cols=247  Identities=28%  Similarity=0.397  Sum_probs=203.6

Q ss_pred             ceeeeeeCcEEEEEEEeCCC---CcEEEEEEeccCchh-hHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEeccC
Q 048419          335 QNLVGSGGFGRVYRGLMPSL---GLEVAIKRIGHNSQQ-GMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVP  410 (653)
Q Consensus       335 ~~~LG~G~fg~Vy~~~~~~~---~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~  410 (653)
                      .++||+|.||.|++|.+...   -..||||.++..... ...+|++|+.+|.+|+|+|+++|+|...+ ..+.+|+|.++
T Consensus       115 ~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~ELap  193 (1039)
T KOG0199|consen  115 YELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFELAP  193 (1039)
T ss_pred             HHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhhhcc
Confidence            56799999999999998643   346999999765443 68899999999999999999999999988 66889999999


Q ss_pred             CCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCCC
Q 048419          411 NGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGAN  490 (653)
Q Consensus       411 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~  490 (653)
                      .|+|.+.|+...   +..|.......++.|||.||.||..   +++|||||..+|+||-....+||+||||.+.+.....
T Consensus       194 lGSLldrLrka~---~~~llv~~Lcdya~QiA~aM~YLes---krlvHRDLAARNlllasprtVKI~DFGLmRaLg~ned  267 (1039)
T KOG0199|consen  194 LGSLLDRLRKAK---KAILLVSRLCDYAMQIAKAMQYLES---KRLVHRDLAARNLLLASPRTVKICDFGLMRALGENED  267 (1039)
T ss_pred             cchHHHHHhhcc---ccceeHHHHHHHHHHHHHHHHHHhh---hhhhhhhhhhhhheecccceeeeecccceeccCCCCc
Confidence            999999998732   5668888889999999999999999   9999999999999999999999999999997755432


Q ss_pred             Cc-c-cccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhc
Q 048419          491 PQ-T-THIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQT  567 (653)
Q Consensus       491 ~~-~-~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~  567 (653)
                      .- . ....-.+.|+|||.++..+++.++|||+|||++|||+| |.-||-+.....                +.+.+|..
T Consensus       268 ~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~q----------------IL~~iD~~  331 (1039)
T KOG0199|consen  268 MYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQ----------------ILKNIDAG  331 (1039)
T ss_pred             ceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHH----------------HHHhcccc
Confidence            21 1 11223568999999999999999999999999999999 778887654322                22222211


Q ss_pred             -cCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          568 -LDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       568 -l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                       +...+..+.+++.++++.||..+|.+||++..|.+.+
T Consensus       332 erLpRPk~csedIY~imk~cWah~paDRptFsair~~~  369 (1039)
T KOG0199|consen  332 ERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDL  369 (1039)
T ss_pred             ccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHhH
Confidence             1233456788999999999999999999999997544

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=100.00  E-value=9.1e-35  Score=307.67  Aligned_cols=267  Identities=25%  Similarity=0.324  Sum_probs=201.4

Q ss_pred             HhhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC--chhhHHHHHHHHHHHhhc-CCCceeeeeeeeccc--ce
Q 048419          327 SVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRL-RHRNLVQLHGWCRKQ--DE  401 (653)
Q Consensus       327 ~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~--~~  401 (653)
                      .+.++|...+.||+|+||.||+|.+..+++.+|||++...  .......+..|+.+++++ +|+||++++++|...  ..
T Consensus         4 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~   83 (337)
T cd07852           4 HILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKD   83 (337)
T ss_pred             hhhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCce
Confidence            3457788899999999999999999888999999988542  333455677899999999 999999999988654  36


Q ss_pred             eEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecC
Q 048419          402 LLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGL  481 (653)
Q Consensus       402 ~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl  481 (653)
                      .++||||++ ++|..++...      .++|..++.++.||+.||+|||+   .+|+|+||||+||+++.++.+||+|||+
T Consensus        84 ~~lv~e~~~-~~L~~~~~~~------~~~~~~~~~i~~qi~~~L~~LH~---~~i~H~dl~p~nill~~~~~~kl~d~g~  153 (337)
T cd07852          84 IYLVFEYME-TDLHAVIRAN------ILEDVHKRYIMYQLLKALKYIHS---GNVIHRDLKPSNILLNSDCRVKLADFGL  153 (337)
T ss_pred             EEEEecccc-cCHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCcEEEeeccc
Confidence            899999997 5898887543      47889999999999999999999   8999999999999999999999999999


Q ss_pred             cccccCCCC----CcccccccCCcccCcccccc-CCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhc
Q 048419          482 AKIYEHGAN----PQTTHIVGTLGYLAPELTRT-GKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHL  556 (653)
Q Consensus       482 a~~~~~~~~----~~~~~~~gt~~y~aPE~~~~-~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~  556 (653)
                      +........    .......|+..|+|||.+.+ ..++.++||||||+++|||++|+.||....................
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~  233 (337)
T cd07852         154 ARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPS  233 (337)
T ss_pred             hhccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCC
Confidence            986643321    22334568899999998754 4578899999999999999999999975433221111000000000


Q ss_pred             c--------cchhHhhhhcc--C-----cCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 048419          557 E--------GEITQAIDQTL--D-----YYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEF  603 (653)
Q Consensus       557 ~--------~~~~~~~d~~l--~-----~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  603 (653)
                      .        ......++...  .     .........+.+++.+||+.+|.+|||+.+++++
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~  295 (337)
T cd07852         234 AEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH  295 (337)
T ss_pred             HHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence            0        00000111000  0     0001124678999999999999999999999976

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=100.00  E-value=2.8e-34  Score=305.93  Aligned_cols=263  Identities=23%  Similarity=0.274  Sum_probs=201.9

Q ss_pred             HhhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC--chhhHHHHHHHHHHHhhcCCCceeeeeeeeccc-----
Q 048419          327 SVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQ-----  399 (653)
Q Consensus       327 ~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~-----  399 (653)
                      ...++|+..+.||+|+||.||+|....++..||||.+...  .....+.+.+|+.++++++|+||+++++++...     
T Consensus        13 ~~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~   92 (353)
T cd07850          13 TVLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEE   92 (353)
T ss_pred             hhhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccc
Confidence            3557899999999999999999999988999999998643  334456778899999999999999999987543     


Q ss_pred             -ceeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEe
Q 048419          400 -DELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGD  478 (653)
Q Consensus       400 -~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D  478 (653)
                       ...++||||+. ++|.+.+..       .+++.++..++.|++.||+|||+   ++++||||||+||+++.++.+||+|
T Consensus        93 ~~~~~lv~e~~~-~~l~~~~~~-------~l~~~~~~~~~~ql~~aL~~LH~---~gi~H~dlkp~Nil~~~~~~~kL~D  161 (353)
T cd07850          93 FQDVYLVMELMD-ANLCQVIQM-------DLDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILD  161 (353)
T ss_pred             cCcEEEEEeccC-CCHHHHHhh-------cCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEECCCCCEEEcc
Confidence             35799999996 588877743       27888899999999999999999   8999999999999999999999999


Q ss_pred             ecCcccccCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhc-c
Q 048419          479 FGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHL-E  557 (653)
Q Consensus       479 fGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~-~  557 (653)
                      ||+++......  ......++..|+|||.+.+..++.++|||||||++|+|++|+.||...+......  ..+..... .
T Consensus       162 fg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~--~~~~~~~~~~  237 (353)
T cd07850         162 FGLARTAGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWN--KIIEQLGTPS  237 (353)
T ss_pred             CccceeCCCCC--CCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHH--HHHHhcCCCC
Confidence            99998654322  1223457889999999999899999999999999999999999997544321110  00000000 0


Q ss_pred             cc-----------------------hhHhhhhcc-----CcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          558 GE-----------------------ITQAIDQTL-----DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       558 ~~-----------------------~~~~~d~~l-----~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                      ..                       ..+.....+     ..........+.+++.+||+.||.+||++.|++++-
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~  312 (353)
T cd07850         238 DEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHP  312 (353)
T ss_pred             HHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcCh
Confidence            00                       001111110     000112345688999999999999999999999864

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=100.00  E-value=1.3e-34  Score=294.77  Aligned_cols=244  Identities=25%  Similarity=0.332  Sum_probs=198.6

Q ss_pred             eeeeCcEEEEEEEeCCCCcEEEEEEeccCc---hhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEeccCCCCc
Q 048419          338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNS---QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSL  414 (653)
Q Consensus       338 LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL  414 (653)
                      ||.|++|.||++....+++.+|+|++....   ....+.+.+|+.++++++|+||+++++++.+.+..++++||+++++|
T Consensus         1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (262)
T cd05572           1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL   80 (262)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence            689999999999998889999999986532   23456789999999999999999999999999999999999999999


Q ss_pred             hhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCCCCccc
Q 048419          415 DKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTT  494 (653)
Q Consensus       415 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~  494 (653)
                      .+++....     .+++.++..++.||++||.|||+   ++++|+||+|+||+++.++.+||+|||++.......  ...
T Consensus        81 ~~~l~~~~-----~l~~~~~~~~~~~i~~~l~~lH~---~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~--~~~  150 (262)
T cd05572          81 WTILRDRG-----LFDEYTARFYIACVVLAFEYLHN---RGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ--KTW  150 (262)
T ss_pred             HHHHhhcC-----CCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc--ccc
Confidence            99997642     38899999999999999999999   999999999999999999999999999998764432  222


Q ss_pred             ccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhccCcCCHH
Q 048419          495 HIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYYDLA  574 (653)
Q Consensus       495 ~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~  574 (653)
                      ...++..|++||.+....++.++|+||||+++|||++|..|+............. +..    +       .....++..
T Consensus       151 ~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~-~~~----~-------~~~~~~~~~  218 (262)
T cd05572         151 TFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYND-ILK----G-------NGKLEFPNY  218 (262)
T ss_pred             cccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHH-Hhc----c-------CCCCCCCcc
Confidence            3467889999999988889999999999999999999999997654211111100 000    0       000111122


Q ss_pred             HHHHHHHHHHHcCCCCCCCCCC-----HHHHHHH
Q 048419          575 EAELVLNLGLFCSAPNPVYRPD-----MRRVVEF  603 (653)
Q Consensus       575 ~~~~l~~l~~~Cl~~dP~~RPs-----~~evl~~  603 (653)
                      ....+.+++.+||+.+|.+||+     ++|++++
T Consensus       219 ~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~  252 (262)
T cd05572         219 IDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKH  252 (262)
T ss_pred             cCHHHHHHHHHHccCChhhCcCCcccCHHHHhcC
Confidence            2567899999999999999999     7777764

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=100.00  E-value=1.3e-34  Score=307.19  Aligned_cols=264  Identities=23%  Similarity=0.294  Sum_probs=197.5

Q ss_pred             hcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC--chhhHHHHHHHHHHHhhcCCCceeeeeeeecccc------
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQD------  400 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~------  400 (653)
                      .++|...+.||+|+||.||+|....+|+.||||++...  .......+.+|+.++++++|+||+++++++....      
T Consensus        14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~   93 (342)
T cd07879          14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ   93 (342)
T ss_pred             ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence            47899999999999999999999888999999998653  2223456889999999999999999999886543      


Q ss_pred             eeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeec
Q 048419          401 ELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFG  480 (653)
Q Consensus       401 ~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG  480 (653)
                      ..++|+||+.. +|..++.       ..+++..+..++.|++.||+|||+   .+++||||||+||+++.++.+||+|||
T Consensus        94 ~~~lv~e~~~~-~l~~~~~-------~~~~~~~~~~~~~qi~~aL~~LH~---~~i~H~dlkp~NIll~~~~~~kL~dfg  162 (342)
T cd07879          94 DFYLVMPYMQT-DLQKIMG-------HPLSEDKVQYLVYQMLCGLKYIHS---AGIIHRDLKPGNLAVNEDCELKILDFG  162 (342)
T ss_pred             eEEEEeccccc-CHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEeeCC
Confidence            46999999964 6665542       247889999999999999999999   899999999999999999999999999


Q ss_pred             CcccccCCCCCcccccccCCcccCcccccc-CCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccc
Q 048419          481 LAKIYEHGANPQTTHIVGTLGYLAPELTRT-GKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGE  559 (653)
Q Consensus       481 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~  559 (653)
                      +++.....    .....++..|+|||.+.+ ..++.++|||||||++|||++|+.||................. .....
T Consensus       163 ~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~-~~~~~  237 (342)
T cd07879         163 LARHADAE----MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTG-VPGPE  237 (342)
T ss_pred             CCcCCCCC----CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcC-CCCHH
Confidence            98764321    223457889999999866 4688999999999999999999999986543221111000000 00000


Q ss_pred             hhHhhhh--------cc---CcCC-----HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH--HcCCC
Q 048419          560 ITQAIDQ--------TL---DYYD-----LAEAELVLNLGLFCSAPNPVYRPDMRRVVEF--LLGDS  608 (653)
Q Consensus       560 ~~~~~d~--------~l---~~~~-----~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~--L~~~~  608 (653)
                      ..+.++.        .+   ....     ......+.+++.+||+.||.+||++.+++++  ++...
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~  304 (342)
T cd07879         238 FVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFR  304 (342)
T ss_pred             HHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhcc
Confidence            0000000        00   0000     0123568899999999999999999999975  44433

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=100.00  E-value=1.1e-34  Score=294.90  Aligned_cols=244  Identities=26%  Similarity=0.376  Sum_probs=198.8

Q ss_pred             eeeeCcEEEEEEEeCCCCcEEEEEEeccCch---hhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEeccCCCCc
Q 048419          338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQ---QGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSL  414 (653)
Q Consensus       338 LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL  414 (653)
                      ||+|+||.||++....+++.+++|.+.....   ...+.+.+|++.+++++|+|++++++.+...+..++++||+++++|
T Consensus         1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (265)
T cd05579           1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL   80 (265)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence            6899999999999998899999999865433   4567889999999999999999999999999999999999999999


Q ss_pred             hhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCCC----
Q 048419          415 DKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGAN----  490 (653)
Q Consensus       415 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~----  490 (653)
                      .+++....     .+++..++.++.||++||+|||+   ++++|+||+|+||++++++.+||+|||++........    
T Consensus        81 ~~~l~~~~-----~~~~~~~~~i~~qi~~~L~~lH~---~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~  152 (265)
T cd05579          81 ASLLENVG-----SLDEDVARIYIAEIVLALEYLHS---NGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLN  152 (265)
T ss_pred             HHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHH---cCeecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccc
Confidence            99997542     48999999999999999999999   8999999999999999999999999999876533211    


Q ss_pred             ---CcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhc
Q 048419          491 ---PQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQT  567 (653)
Q Consensus       491 ---~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~  567 (653)
                         .......++..|+|||.......+.++||||||++++||++|+.||........   ...+..    +.        
T Consensus       153 ~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~---~~~~~~----~~--------  217 (265)
T cd05579         153 DDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEI---FQNILN----GK--------  217 (265)
T ss_pred             cccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHhc----CC--------
Confidence               122334578899999999888899999999999999999999999975543211   111110    00        


Q ss_pred             cCcCCHH--HHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          568 LDYYDLA--EAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       568 l~~~~~~--~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                      . .....  ....+.+++.+||+.+|.+||++.++.+.|+
T Consensus       218 ~-~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~  256 (265)
T cd05579         218 I-EWPEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKN  256 (265)
T ss_pred             c-CCCccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhc
Confidence            0 00111  2467889999999999999999966666654

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=100.00  E-value=1.7e-34  Score=297.02  Aligned_cols=260  Identities=26%  Similarity=0.326  Sum_probs=202.5

Q ss_pred             cCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCch--hhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEecc
Q 048419          332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQ--QGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYV  409 (653)
Q Consensus       332 f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~  409 (653)
                      |...+.||+|++|.||+|....+++.+++|++.....  .....+..|++++++++|+||+++++++...+..++|+||+
T Consensus         1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~   80 (283)
T cd05118           1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM   80 (283)
T ss_pred             CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence            4567889999999999999988899999999865432  24567889999999999999999999999999999999999


Q ss_pred             CCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCC
Q 048419          410 PNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGA  489 (653)
Q Consensus       410 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~  489 (653)
                      ++ +|.+++....    ..+++.+++.++.|++.||.|||+   .+++|+||||+||+++.++.+||+|||.+.......
T Consensus        81 ~~-~l~~~l~~~~----~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~  152 (283)
T cd05118          81 DT-DLYKLIKDRQ----RGLPESLIKSYLYQLLQGLAFCHS---HGILHRDLKPENLLINTEGVLKLADFGLARSFGSPV  152 (283)
T ss_pred             CC-CHHHHHHhhc----ccCCHHHHHHHHHHHHHHHHHHHH---CCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc
Confidence            75 8888876542    358999999999999999999999   899999999999999999999999999998765432


Q ss_pred             CCcccccccCCcccCccccccC-CCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcc------cchhH
Q 048419          490 NPQTTHIVGTLGYLAPELTRTG-KATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLE------GEITQ  562 (653)
Q Consensus       490 ~~~~~~~~gt~~y~aPE~~~~~-~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~------~~~~~  562 (653)
                       .......++..|+|||.+.+. .++.++||||||+++|+|++|+.||......+....   +......      ....+
T Consensus       153 -~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~  228 (283)
T cd05118         153 -RPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFK---IFRTLGTPDPEVWPKFTS  228 (283)
T ss_pred             -ccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH---HHHHcCCCchHhcccchh
Confidence             122234577889999998776 789999999999999999999999975543222111   0000000      00000


Q ss_pred             hhh-----------hccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 048419          563 AID-----------QTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEF  603 (653)
Q Consensus       563 ~~d-----------~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  603 (653)
                      ...           ..+..........+.+++..||+.||.+||++.+++.+
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~  280 (283)
T cd05118         229 LARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAH  280 (283)
T ss_pred             hhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhC
Confidence            000           00000111235779999999999999999999999875

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=100.00  E-value=9.2e-35  Score=307.65  Aligned_cols=267  Identities=24%  Similarity=0.318  Sum_probs=202.8

Q ss_pred             hhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC--chhhHHHHHHHHHHHhhcCCCceeeeeeeeccc-----c
Q 048419          328 VTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQ-----D  400 (653)
Q Consensus       328 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~-----~  400 (653)
                      +.++|...+.||+|+||.||+|....++..||||.+...  .......+..|+.+++.++|+||+++++++...     .
T Consensus         3 ~~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~   82 (337)
T cd07858           3 VDTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFN   82 (337)
T ss_pred             cccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccC
Confidence            356788999999999999999999989999999998653  333455678899999999999999999988654     3


Q ss_pred             eeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeec
Q 048419          401 ELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFG  480 (653)
Q Consensus       401 ~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG  480 (653)
                      ..++|+||+. ++|.+++...     ..+++..+..++.|++.||.|||+   ++++|+||||+||+++.++.+||+|||
T Consensus        83 ~~~lv~e~~~-~~L~~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~---~~i~H~dlkp~Nil~~~~~~~kL~Dfg  153 (337)
T cd07858          83 DVYIVYELMD-TDLHQIIRSS-----QTLSDDHCQYFLYQLLRGLKYIHS---ANVLHRDLKPSNLLLNANCDLKICDFG  153 (337)
T ss_pred             cEEEEEeCCC-CCHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCCCEEECcCc
Confidence            5799999995 6888888653     348899999999999999999999   899999999999999999999999999


Q ss_pred             CcccccCCCCCcccccccCCcccCcccccc-CCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHh------
Q 048419          481 LAKIYEHGANPQTTHIVGTLGYLAPELTRT-GKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKE------  553 (653)
Q Consensus       481 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~------  553 (653)
                      +++...... .......++..|+|||.+.. ..++.++|||||||++|+|++|+.||..............+..      
T Consensus       154 ~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~  232 (337)
T cd07858         154 LARTTSEKG-DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEED  232 (337)
T ss_pred             cccccCCCc-ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHH
Confidence            998654322 12233467889999998764 4688999999999999999999999975433221111110000      


Q ss_pred             --hhcccchhHhhhhc-------cCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          554 --LHLEGEITQAIDQT-------LDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       554 --~~~~~~~~~~~d~~-------l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                        ........+.+...       ...........+.+++.+||+.+|.+||++.|++++-
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~  292 (337)
T cd07858         233 LGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHP  292 (337)
T ss_pred             hhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCc
Confidence              00001111111100       0000112346788999999999999999999999873

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=100.00  E-value=1.4e-34  Score=299.92  Aligned_cols=246  Identities=23%  Similarity=0.337  Sum_probs=200.7

Q ss_pred             ceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEeccCCCCc
Q 048419          335 QNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSL  414 (653)
Q Consensus       335 ~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL  414 (653)
                      ...||+|+||.||++....+++.||||++........+.+.+|+..+++++|+|++++++++...+..++||||+++++|
T Consensus        25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L  104 (292)
T cd06657          25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL  104 (292)
T ss_pred             HHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcH
Confidence            35799999999999999888999999998665555667789999999999999999999999999999999999999999


Q ss_pred             hhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCCCCccc
Q 048419          415 DKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTT  494 (653)
Q Consensus       415 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~  494 (653)
                      .+++...      .+++...+.++.|++.+|+|||+   .+++|+||+|+||++++++.++|+|||++....... ....
T Consensus       105 ~~~~~~~------~~~~~~~~~~~~ql~~~l~~lH~---~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~-~~~~  174 (292)
T cd06657         105 TDIVTHT------RMNEEQIAAVCLAVLKALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV-PRRK  174 (292)
T ss_pred             HHHHhcC------CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEEcccccceeccccc-cccc
Confidence            9987542      37889999999999999999999   899999999999999999999999999987654322 1223


Q ss_pred             ccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhccCcCCHH
Q 048419          495 HIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYYDLA  574 (653)
Q Consensus       495 ~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~  574 (653)
                      ...++..|+|||.+.+..++.++|+||+|+++|||++|..||.........   ..+...         ..+.+.. ...
T Consensus       175 ~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~---~~~~~~---------~~~~~~~-~~~  241 (292)
T cd06657         175 SLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAM---KMIRDN---------LPPKLKN-LHK  241 (292)
T ss_pred             ccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH---HHHHhh---------CCcccCC-ccc
Confidence            346789999999998888999999999999999999999998754332211   111110         0111100 011


Q ss_pred             HHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 048419          575 EAELVLNLGLFCSAPNPVYRPDMRRVVEF  603 (653)
Q Consensus       575 ~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  603 (653)
                      ....+.+++.+||+.+|.+||++.+++++
T Consensus       242 ~~~~l~~li~~~l~~~P~~R~~~~~ll~~  270 (292)
T cd06657         242 VSPSLKGFLDRLLVRDPAQRATAAELLKH  270 (292)
T ss_pred             CCHHHHHHHHHHHhCCcccCcCHHHHhcC
Confidence            23457889999999999999999999985

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3e-34  Score=292.77  Aligned_cols=251  Identities=25%  Similarity=0.342  Sum_probs=200.5

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC-----chhhHHHHHHHHHHHhhcCCCceeeeeeeeccc--cee
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN-----SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQ--DEL  402 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~--~~~  402 (653)
                      .+|+..+.||+|+||.||+|.+..++..||+|.+...     ..+..+.+.+|++++++++|+||+++++++.+.  +.+
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (264)
T cd06653           2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL   81 (264)
T ss_pred             CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence            4688899999999999999999888999999987432     234456888999999999999999999988654  468


Q ss_pred             EEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCc
Q 048419          403 LLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLA  482 (653)
Q Consensus       403 ~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla  482 (653)
                      ++++||+++++|.+++...     ..+++....+++.|++.||.|||+   ++++|+||||+||+++.++.++|+|||++
T Consensus        82 ~~v~e~~~~~~L~~~~~~~-----~~l~~~~~~~~~~~i~~al~~LH~---~~i~H~dl~p~ni~i~~~~~~~l~dfg~~  153 (264)
T cd06653          82 SIFVEYMPGGSIKDQLKAY-----GALTENVTRRYTRQILQGVSYLHS---NMIVHRDIKGANILRDSAGNVKLGDFGAS  153 (264)
T ss_pred             EEEEEeCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCCCEEECccccc
Confidence            8999999999999998653     237888899999999999999999   89999999999999999999999999999


Q ss_pred             ccccCCCC--CcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccch
Q 048419          483 KIYEHGAN--PQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEI  560 (653)
Q Consensus       483 ~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~  560 (653)
                      +.......  .......++..|+|||.+.+..++.++|+|||||+++||++|+.||.........  .+.    ...+  
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~--~~~----~~~~--  225 (264)
T cd06653         154 KRIQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAI--FKI----ATQP--  225 (264)
T ss_pred             cccccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHHHH--HHH----HcCC--
Confidence            86532111  1122346888999999998888999999999999999999999999754322111  110    0000  


Q ss_pred             hHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 048419          561 TQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEF  603 (653)
Q Consensus       561 ~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  603 (653)
                            .....+....+.+.+++..||+ +|..||+..+++.+
T Consensus       226 ------~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~  261 (264)
T cd06653         226 ------TKPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRH  261 (264)
T ss_pred             ------CCCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhcC
Confidence                  0011222334678899999999 57999999998865

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=100.00  E-value=1.4e-34  Score=305.97  Aligned_cols=270  Identities=24%  Similarity=0.321  Sum_probs=204.4

Q ss_pred             hhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc--hhhHHHHHHHHHHHhhcCCCceeeeeeeecc----cce
Q 048419          328 VTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS--QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRK----QDE  401 (653)
Q Consensus       328 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~----~~~  401 (653)
                      +.++|+..+.||+|++|.||+|....++..||+|++....  ....+.+.+|+.++++++|+||+++++++..    ...
T Consensus         3 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~   82 (334)
T cd07855           3 VGSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKD   82 (334)
T ss_pred             hhhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCce
Confidence            3478888999999999999999999889999999986542  2345677889999999999999999998753    346


Q ss_pred             eEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecC
Q 048419          402 LLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGL  481 (653)
Q Consensus       402 ~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl  481 (653)
                      +++|+||+. ++|.+++...     ..+++..++.++.||+.||.|||+   ++++||||||+||++++++.+||+|||+
T Consensus        83 ~~lv~e~~~-~~l~~~~~~~-----~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~Nil~~~~~~~kl~dfg~  153 (334)
T cd07855          83 VYVVMDLME-SDLHHIIHSD-----QPLTEEHIRYFLYQLLRGLKYIHS---ANVIHRDLKPSNLLVNEDCELRIGDFGM  153 (334)
T ss_pred             EEEEEehhh-hhHHHHhccC-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCcEEeccccc
Confidence            899999995 6898888653     338999999999999999999999   8999999999999999999999999999


Q ss_pred             cccccCCCCC---cccccccCCcccCcccccc-CCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHH-----
Q 048419          482 AKIYEHGANP---QTTHIVGTLGYLAPELTRT-GKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVK-----  552 (653)
Q Consensus       482 a~~~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~-----  552 (653)
                      +.........   ......++..|+|||.+.+ ..++.++|||||||++|||++|+.||................     
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~  233 (334)
T cd07855         154 ARGLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSE  233 (334)
T ss_pred             ceeecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChh
Confidence            9765432211   1123468889999998765 468899999999999999999999997654322111100000     


Q ss_pred             ---hhhcccchhHhhhhcc--CcCC-----HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          553 ---ELHLEGEITQAIDQTL--DYYD-----LAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       553 ---~~~~~~~~~~~~d~~l--~~~~-----~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                         .......+.+..+..-  ....     ......+.+++.+||+.+|.+||++.+++++..-
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~  297 (334)
T cd07855         234 EVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFL  297 (334)
T ss_pred             HhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChhh
Confidence               0000001111111000  0111     1235779999999999999999999999987643

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=100.00  E-value=4.3e-34  Score=292.38  Aligned_cols=251  Identities=23%  Similarity=0.280  Sum_probs=195.3

Q ss_pred             HHHHHhhcCcCcceee--eeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhc-CCCceeeeeeeeccc
Q 048419          323 AELASVTKGFGEQNLV--GSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRL-RHRNLVQLHGWCRKQ  399 (653)
Q Consensus       323 ~el~~at~~f~~~~~L--G~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~  399 (653)
                      .++....++|.+.+.+  |+|+||.||++....++..+|+|.+........     |+.....+ +|+|++++++++...
T Consensus         7 ~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-----e~~~~~~~~~h~~iv~~~~~~~~~   81 (267)
T PHA03390          7 SELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI-----EPMVHQLMKDNPNFIKLYYSVTTL   81 (267)
T ss_pred             HHHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh-----hHHHHHHhhcCCCEEEEEEEEecC
Confidence            4445555677777766  999999999999998899999999864322111     22222222 699999999999999


Q ss_pred             ceeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCC-cEEEEe
Q 048419          400 DELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYL-NAKLGD  478 (653)
Q Consensus       400 ~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~-~~kl~D  478 (653)
                      +..++||||+++++|.+++....     .+++.+++.++.|+++||.|||+   .+++||||||+||+++.++ .++|+|
T Consensus        82 ~~~~iv~e~~~~~~L~~~l~~~~-----~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~~~l~d  153 (267)
T PHA03390         82 KGHVLIMDYIKDGDLFDLLKKEG-----KLSEAEVKKIIRQLVEALNDLHK---HNIIHNDIKLENVLYDRAKDRIYLCD  153 (267)
T ss_pred             CeeEEEEEcCCCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEEeCCCCeEEEec
Confidence            99999999999999999996542     58999999999999999999999   8999999999999999988 999999


Q ss_pred             ecCcccccCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhccc
Q 048419          479 FGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEG  558 (653)
Q Consensus       479 fGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~  558 (653)
                      ||+++.....     ....++..|+|||++.+..++.++||||||++++||++|+.||...... .....++.....   
T Consensus       154 fg~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~-~~~~~~~~~~~~---  224 (267)
T PHA03390        154 YGLCKIIGTP-----SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDE-ELDLESLLKRQQ---  224 (267)
T ss_pred             CccceecCCC-----ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcc-hhhHHHHHHhhc---
Confidence            9998765322     2236788999999999888999999999999999999999999744321 111112211110   


Q ss_pred             chhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCC-HHHHHHH
Q 048419          559 EITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPD-MRRVVEF  603 (653)
Q Consensus       559 ~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs-~~evl~~  603 (653)
                             ... .........+.+++.+||+.+|.+||+ +.|++++
T Consensus       225 -------~~~-~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h  262 (267)
T PHA03390        225 -------KKL-PFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKH  262 (267)
T ss_pred             -------ccC-CcccccCHHHHHHHHHHhccChhhCCchHHHHhcC
Confidence                   000 011123467889999999999999996 6998864

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.1e-34  Score=296.80  Aligned_cols=252  Identities=23%  Similarity=0.352  Sum_probs=213.9

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc--hhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEe
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS--QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYD  407 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E  407 (653)
                      .-|...+.||+|-|..|-++++--+|+.||||++.+..  .-....+.+|++.|+-++|||||+||++......+|||+|
T Consensus        18 GLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLE   97 (864)
T KOG4717|consen   18 GLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILE   97 (864)
T ss_pred             eeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEE
Confidence            44667788999999999999999999999999998763  3345678899999999999999999999999999999999


Q ss_pred             ccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEE-cCCCcEEEEeecCccccc
Q 048419          408 YVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILL-DTYLNAKLGDFGLAKIYE  486 (653)
Q Consensus       408 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll-~~~~~~kl~DfGla~~~~  486 (653)
                      .-.+|+|.+||-.+.    ..+.++...+.+.||+.|+.|+|+   ..+|||||||+||.+ ..-|-+||.|||++-.+.
T Consensus        98 LGD~GDl~DyImKHe----~Gl~E~La~kYF~QI~~AI~YCHq---LHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~  170 (864)
T KOG4717|consen   98 LGDGGDLFDYIMKHE----EGLNEDLAKKYFAQIVHAISYCHQ---LHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQ  170 (864)
T ss_pred             ecCCchHHHHHHhhh----ccccHHHHHHHHHHHHHHHHHHhh---hhhhcccCCcceeEEeeecCceEeeeccccccCC
Confidence            999999999998774    458899999999999999999999   899999999999977 667889999999998776


Q ss_pred             CCCCCcccccccCCcccCccccccCCCC-CccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhh
Q 048419          487 HGANPQTTHIVGTLGYLAPELTRTGKAT-TSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAID  565 (653)
Q Consensus       487 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d  565 (653)
                      .+.  ..+..+|+..|-|||++.+..|+ ++.|||||||+||-|+||+.||+...+.+.+               ..++|
T Consensus       171 PG~--kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETL---------------TmImD  233 (864)
T KOG4717|consen  171 PGK--KLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETL---------------TMIMD  233 (864)
T ss_pred             Ccc--hhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhh---------------hhhhc
Confidence            543  45567999999999999998886 5899999999999999999999865543321               22222


Q ss_pred             hccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          566 QTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       566 ~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                      ..- ..+.....++.+|+..||..||.+|-+.+||+..-+-
T Consensus       234 CKY-tvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s~~Wl  273 (864)
T KOG4717|consen  234 CKY-TVPSHVSKECRDLIQSMLVRDPKKRASLEEIVSTSWL  273 (864)
T ss_pred             ccc-cCchhhhHHHHHHHHHHHhcCchhhccHHHHhccccc
Confidence            211 2234456789999999999999999999999976543

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=8.3e-36  Score=311.07  Aligned_cols=251  Identities=23%  Similarity=0.377  Sum_probs=207.2

Q ss_pred             CcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEeccCCC
Q 048419          333 GEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNG  412 (653)
Q Consensus       333 ~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~g  412 (653)
                      .+...||.|+||.|||+..+.++...|-|++...+.+..+.|+-|+++|..+.||+||+|++.|.-++.++++.|||+||
T Consensus        35 eIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~GG  114 (1187)
T KOG0579|consen   35 EIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCGGG  114 (1187)
T ss_pred             HHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecCCc
Confidence            34567999999999999999888888999998888889999999999999999999999999999999999999999999


Q ss_pred             CchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCCCCc
Q 048419          413 SLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQ  492 (653)
Q Consensus       413 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~  492 (653)
                      -++..+-..+    ..|++.++.-+++|++.||.|||+   +.|||||||+.|||++-+|.++|+|||.+..... ....
T Consensus       115 AVDaimlEL~----r~LtE~QIqvvc~q~ldALn~LHs---~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~-t~qk  186 (1187)
T KOG0579|consen  115 AVDAIMLELG----RVLTEDQIQVVCYQVLDALNWLHS---QNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKS-TRQK  186 (1187)
T ss_pred             hHhHHHHHhc----cccchHHHHHHHHHHHHHHHHHhh---cchhhhhccccceEEEecCcEeeecccccccchh-HHhh
Confidence            9999887754    569999999999999999999999   9999999999999999999999999998754321 1223


Q ss_pred             ccccccCCcccCccccc-----cCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhc
Q 048419          493 TTHIVGTLGYLAPELTR-----TGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQT  567 (653)
Q Consensus       493 ~~~~~gt~~y~aPE~~~-----~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~  567 (653)
                      ...+.||+.|||||+..     ...|+.++||||||++|.||..+.+|-....+..  .+......     ..+.++.  
T Consensus       187 RDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMR--VllKiaKS-----ePPTLlq--  257 (1187)
T KOG0579|consen  187 RDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMR--VLLKIAKS-----EPPTLLQ--  257 (1187)
T ss_pred             hccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHH--HHHHHhhc-----CCCcccC--
Confidence            34578999999999774     4578999999999999999999999976544321  11111111     1111111  


Q ss_pred             cCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          568 LDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       568 l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                          +..-...+.++...||..||..||++.+++++-
T Consensus       258 ----PS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~Hp  290 (1187)
T KOG0579|consen  258 ----PSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKHP  290 (1187)
T ss_pred             ----cchhhhHHHHHHHHHHhcCCccCCCHHHHhhCc
Confidence                112245688999999999999999999998764

>PHA03210 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=1.1e-34  Score=322.23  Aligned_cols=273  Identities=20%  Similarity=0.291  Sum_probs=192.2

Q ss_pred             hhcCcCcceeeeeeCcEEEEEEEeCCCC-cEEEEE------------------EeccCchhhHHHHHHHHHHHhhcCCCc
Q 048419          328 VTKGFGEQNLVGSGGFGRVYRGLMPSLG-LEVAIK------------------RIGHNSQQGMKEFVAEIMSMGRLRHRN  388 (653)
Q Consensus       328 at~~f~~~~~LG~G~fg~Vy~~~~~~~~-~~vavK------------------~~~~~~~~~~~~~~~E~~~l~~l~H~n  388 (653)
                      ..++|+..+.||+|+||+||++..+... ...++|                  .+. ........+.+|+.++++++|+|
T Consensus       146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-~~~~~~~~~~~Ei~il~~l~Hpn  224 (501)
T PHA03210        146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVK-AGSRAAIQLENEILALGRLNHEN  224 (501)
T ss_pred             hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhh-cchHHHHHHHHHHHHHHhCCCCC
Confidence            3467999999999999999998764322 112222                  111 12223456889999999999999


Q ss_pred             eeeeeeeecccceeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEE
Q 048419          389 LVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILL  468 (653)
Q Consensus       389 iv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll  468 (653)
                      |+++++++...+..++|+|++. ++|.+++..............+...++.||+.||.|||+   ++|+||||||+|||+
T Consensus       225 Iv~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~---~gIiHrDLKP~NILl  300 (501)
T PHA03210        225 ILKIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHD---KKLIHRDIKLENIFL  300 (501)
T ss_pred             cCcEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEE
Confidence            9999999999999999999984 577777754332112223456677899999999999999   899999999999999


Q ss_pred             cCCCcEEEEeecCcccccCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCC-CChhhhhhHHHH
Q 048419          469 DTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRS-IEPQKAAAELLL  547 (653)
Q Consensus       469 ~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p-~~~~~~~~~~~l  547 (653)
                      +.++.+||+|||+++.+............||..|+|||++.+..++.++|||||||++|||++|+.+ +..........+
T Consensus       301 ~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~  380 (501)
T PHA03210        301 NCDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQL  380 (501)
T ss_pred             CCCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHH
Confidence            9999999999999987654333333345799999999999998999999999999999999998754 432221111111


Q ss_pred             HHHHHhhh-ccc-------chhHhhhhcc-CcC--C-------HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          548 VDWVKELH-LEG-------EITQAIDQTL-DYY--D-------LAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       548 ~~~~~~~~-~~~-------~~~~~~d~~l-~~~--~-------~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                      .+.+.... ...       ++.+.++... ...  .       ......+.+++.+||+.||.+|||+.|++++-.
T Consensus       381 ~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~  456 (501)
T PHA03210        381 LKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLALPL  456 (501)
T ss_pred             HHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhChh
Confidence            11111100 000       0111111000 000  0       001245678899999999999999999998654

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=100.00  E-value=7.7e-34  Score=292.84  Aligned_cols=261  Identities=26%  Similarity=0.334  Sum_probs=198.4

Q ss_pred             cCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCch--hhHHHHHHHHHHHhhc---CCCceeeeeeeecccce-----
Q 048419          332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQ--QGMKEFVAEIMSMGRL---RHRNLVQLHGWCRKQDE-----  401 (653)
Q Consensus       332 f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~H~niv~l~g~~~~~~~-----  401 (653)
                      |+..+.||+|+||.||+|....+++.||+|++.....  .....+.+|+.+++++   +|+|++++++++...+.     
T Consensus         1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~   80 (287)
T cd07838           1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK   80 (287)
T ss_pred             CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence            5678899999999999999988899999999964322  2234566787777666   59999999999988776     


Q ss_pred             eEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecC
Q 048419          402 LLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGL  481 (653)
Q Consensus       402 ~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl  481 (653)
                      .+++|||+++ +|.+++....   ...+++.+++.++.|+++||.|||+   .+++|+||+|+||+++.++.+||+|||+
T Consensus        81 ~~l~~e~~~~-~l~~~l~~~~---~~~l~~~~~~~~~~~i~~al~~LH~---~~i~h~~l~~~nili~~~~~~~l~dfg~  153 (287)
T cd07838          81 LTLVFEHVDQ-DLATYLSKCP---KPGLPPETIKDLMRQLLRGVDFLHS---HRIVHRDLKPQNILVTSDGQVKIADFGL  153 (287)
T ss_pred             eEEEehhccc-CHHHHHHHcc---CCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCChhhEEEccCCCEEEeccCc
Confidence            8999999974 8988886543   2358999999999999999999999   8999999999999999999999999999


Q ss_pred             cccccCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchh
Q 048419          482 AKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEIT  561 (653)
Q Consensus       482 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~  561 (653)
                      +........  .....++..|+|||.+.+..++.++|||||||++|||++|+.|+......+.  +..+...........
T Consensus       154 ~~~~~~~~~--~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~  229 (287)
T cd07838         154 ARIYSFEMA--LTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQ--LDKIFDVIGLPSEEE  229 (287)
T ss_pred             ceeccCCcc--cccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHH--HHHHHHHcCCCChHh
Confidence            987643321  1233578899999999988899999999999999999999999876543221  111111110000000


Q ss_pred             ---------Hhhhhcc----CcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 048419          562 ---------QAIDQTL----DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEF  603 (653)
Q Consensus       562 ---------~~~d~~l----~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  603 (653)
                               .......    ..........+.+++.+||+.||.+||++.|++++
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~  284 (287)
T cd07838         230 WPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQH  284 (287)
T ss_pred             cCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcC
Confidence                     0000000    01111234678899999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=100.00  E-value=4.2e-34  Score=294.45  Aligned_cols=263  Identities=25%  Similarity=0.364  Sum_probs=199.2

Q ss_pred             cCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCch-hhHHHHHHHHHHHhhcC-CCceeeeeeeecccceeEEEEecc
Q 048419          332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQ-QGMKEFVAEIMSMGRLR-HRNLVQLHGWCRKQDELLLVYDYV  409 (653)
Q Consensus       332 f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lV~E~~  409 (653)
                      |...+.||+|++|.||+|....+++.|+||++..... .......+|+..+++++ |+|++++++++...+..++||||+
T Consensus         1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~   80 (283)
T cd07830           1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM   80 (283)
T ss_pred             CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence            5567899999999999999988899999999865422 22334567999999999 999999999999999999999999


Q ss_pred             CCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCC
Q 048419          410 PNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGA  489 (653)
Q Consensus       410 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~  489 (653)
                       +|+|.+++....   ...+++.++..++.|++.+|.|||+   ++++|+||+|+||+++.++.++|+|||++.......
T Consensus        81 -~~~l~~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~Lh~---~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~  153 (283)
T cd07830          81 -EGNLYQLMKDRK---GKPFSESVIRSIIYQILQGLAHIHK---HGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRP  153 (283)
T ss_pred             -CCCHHHHHHhcc---cccCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChhhEEEcCCCCEEEeecccceeccCCC
Confidence             789998887653   2458999999999999999999999   899999999999999999999999999998654322


Q ss_pred             CCcccccccCCcccCccccc-cCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHH-HHH---------HHHhhhccc
Q 048419          490 NPQTTHIVGTLGYLAPELTR-TGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELL-LVD---------WVKELHLEG  558 (653)
Q Consensus       490 ~~~~~~~~gt~~y~aPE~~~-~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~-l~~---------~~~~~~~~~  558 (653)
                        ......++..|+|||.+. ...++.++|+||||++++||++|+.||......+... ...         |........
T Consensus       154 --~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (283)
T cd07830         154 --PYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLAS  231 (283)
T ss_pred             --CcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhc
Confidence              122346788999999875 4457899999999999999999999986543322111 000         100000000


Q ss_pred             chhHhhh----hccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 048419          559 EITQAID----QTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEF  603 (653)
Q Consensus       559 ~~~~~~d----~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  603 (653)
                      .+...+.    ..+..........+.+++.+||+.+|.+||++.|++.+
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~  280 (283)
T cd07830         232 KLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQH  280 (283)
T ss_pred             cccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhC
Confidence            0000000    00000001113678999999999999999999999865

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=100.00  E-value=2e-34  Score=295.92  Aligned_cols=250  Identities=24%  Similarity=0.335  Sum_probs=205.0

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC---chhhHHHHHHHHHHHhhcC-CCceeeeeeeecccceeEEE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN---SQQGMKEFVAEIMSMGRLR-HRNLVQLHGWCRKQDELLLV  405 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lV  405 (653)
                      ++|...+.||+|++|.||++....+++.||+|++...   .....+.+..|++++++++ |+||+++++++...+..++|
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv   80 (280)
T cd05581           1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV   80 (280)
T ss_pred             CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence            4688889999999999999999888999999998653   2334567889999999998 99999999999999999999


Q ss_pred             EeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccc
Q 048419          406 YDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIY  485 (653)
Q Consensus       406 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~  485 (653)
                      |||+++++|.+++....     .+++..++.++.|++.||.|||+   .+++|+||+|+||+++.++.++|+|||++...
T Consensus        81 ~e~~~~~~L~~~l~~~~-----~l~~~~~~~i~~ql~~~l~~Lh~---~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~  152 (280)
T cd05581          81 LEYAPNGELLQYIRKYG-----SLDEKCTRFYAAEILLALEYLHS---KGIIHRDLKPENILLDKDMHIKITDFGTAKVL  152 (280)
T ss_pred             EcCCCCCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHeEECCCCCEEecCCcccccc
Confidence            99999999999997643     48999999999999999999999   89999999999999999999999999999866


Q ss_pred             cCCCC-------------------CcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHH
Q 048419          486 EHGAN-------------------PQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELL  546 (653)
Q Consensus       486 ~~~~~-------------------~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~  546 (653)
                      .....                   .......++..|+|||......++.++||||||++++|+++|+.|+........  
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~--  230 (280)
T cd05581         153 DPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLT--  230 (280)
T ss_pred             CCccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHH--
Confidence            43321                   112234578899999999888899999999999999999999999986542111  


Q ss_pred             HHHHHHhhhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCH----HHHHHH
Q 048419          547 LVDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDM----RRVVEF  603 (653)
Q Consensus       547 l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~----~evl~~  603 (653)
                      + ..+..             .....+....+.+.+++.+||+.+|.+||++    .+++++
T Consensus       231 ~-~~~~~-------------~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~  277 (280)
T cd05581         231 F-QKILK-------------LEYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAH  277 (280)
T ss_pred             H-HHHHh-------------cCCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcC
Confidence            1 11110             0001111225678899999999999999999    777754

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=4.6e-34  Score=290.51  Aligned_cols=244  Identities=24%  Similarity=0.267  Sum_probs=190.8

Q ss_pred             eeeeeeCcEEEEEEEeCCCCcEEEEEEeccCch---hhHHHHHHHHHH-HhhcCCCceeeeeeeecccceeEEEEeccCC
Q 048419          336 NLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQ---QGMKEFVAEIMS-MGRLRHRNLVQLHGWCRKQDELLLVYDYVPN  411 (653)
Q Consensus       336 ~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~-l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~  411 (653)
                      +.||+|+||.||+|....+++.||||.+.....   .....+..|... ....+|+|++++++++...+..++|+||+++
T Consensus         2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   81 (260)
T cd05611           2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG   81 (260)
T ss_pred             ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence            469999999999999988899999999865432   223344555544 4455899999999999999999999999999


Q ss_pred             CCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCCCC
Q 048419          412 GSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANP  491 (653)
Q Consensus       412 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~  491 (653)
                      ++|.+++...     ..+++.++..++.|++.||.|||+   .+++|+||+|+||++++++.+||+|||+++....    
T Consensus        82 ~~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~----  149 (260)
T cd05611          82 GDCASLIKTL-----GGLPEDWAKQYIAEVVLGVEDLHQ---RGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE----  149 (260)
T ss_pred             CCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCcEEEeecccceeccc----
Confidence            9999998654     348899999999999999999999   8999999999999999999999999999875432    


Q ss_pred             cccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhccCcC
Q 048419          492 QTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYY  571 (653)
Q Consensus       492 ~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~  571 (653)
                       .....++..|+|||.+.+..++.++||||||+++|||++|..||........  .....     .+...  ...   ..
T Consensus       150 -~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~--~~~~~-----~~~~~--~~~---~~  216 (260)
T cd05611         150 -NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAV--FDNIL-----SRRIN--WPE---EV  216 (260)
T ss_pred             -cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHH--HHHHH-----hcccC--CCC---cc
Confidence             2234578899999999888889999999999999999999999975443211  10000     00000  000   00


Q ss_pred             CHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          572 DLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       572 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                      .......+.+++.+||+.+|++||++.++.+.|
T Consensus       217 ~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l  249 (260)
T cd05611         217 KEFCSPEAVDLINRLLCMDPAKRLGANGYQEIK  249 (260)
T ss_pred             cccCCHHHHHHHHHHccCCHHHccCCCcHHHHH
Confidence            112346789999999999999999776665554

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=100.00  E-value=3.5e-34  Score=302.21  Aligned_cols=265  Identities=25%  Similarity=0.301  Sum_probs=205.2

Q ss_pred             CcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc--hhhHHHHHHHHHHHhhcCCCceeeeeeeecccc-----eeE
Q 048419          331 GFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS--QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQD-----ELL  403 (653)
Q Consensus       331 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~-----~~~  403 (653)
                      +|...+.||+|++|.||+|+...+++.||||++....  ....+.+.+|+..+++++|+||+++++++...+     .++
T Consensus         1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~   80 (330)
T cd07834           1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY   80 (330)
T ss_pred             CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence            4778899999999999999998889999999987543  445578899999999999999999999987775     789


Q ss_pred             EEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcc
Q 048419          404 LVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK  483 (653)
Q Consensus       404 lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~  483 (653)
                      ++|||++ ++|.+++...     ..+++..++.++.|++.||.|||+   .+++|+||||+|||++.++.++|+|||++.
T Consensus        81 lv~e~~~-~~l~~~l~~~-----~~l~~~~~~~i~~~l~~~l~~LH~---~gi~H~dlkp~nili~~~~~~~L~dfg~~~  151 (330)
T cd07834          81 IVTELME-TDLHKVIKSP-----QPLTDDHIQYFLYQILRGLKYLHS---ANVIHRDLKPSNILVNSNCDLKICDFGLAR  151 (330)
T ss_pred             EEecchh-hhHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEcccCceE
Confidence            9999997 4888888653     258999999999999999999999   899999999999999999999999999998


Q ss_pred             cccCCCC--CcccccccCCcccCccccccC-CCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhh------
Q 048419          484 IYEHGAN--PQTTHIVGTLGYLAPELTRTG-KATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKEL------  554 (653)
Q Consensus       484 ~~~~~~~--~~~~~~~gt~~y~aPE~~~~~-~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~------  554 (653)
                      .......  .......++..|+|||.+.+. .++.++||||||+++++|++|+.||.............-....      
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~  231 (330)
T cd07834         152 GVDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDL  231 (330)
T ss_pred             eecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHh
Confidence            7654321  122334678899999999887 7899999999999999999999999765432211110000000      


Q ss_pred             --hcccchhHhhhhcc--Cc-----CCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          555 --HLEGEITQAIDQTL--DY-----YDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       555 --~~~~~~~~~~d~~l--~~-----~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                        .......+.+...-  ..     ........+.+++.+||+.+|.+||++.+++++-
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~  290 (330)
T cd07834         232 KFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHP  290 (330)
T ss_pred             hhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCc
Confidence              00001111111000  00     0111346788999999999999999999999864

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=100.00  E-value=4.4e-34  Score=303.41  Aligned_cols=270  Identities=22%  Similarity=0.285  Sum_probs=205.1

Q ss_pred             cCHHHHHHhhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc--hhhHHHHHHHHHHHhhcCCCceeeeeeeec
Q 048419          320 FKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS--QQGMKEFVAEIMSMGRLRHRNLVQLHGWCR  397 (653)
Q Consensus       320 f~~~el~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~  397 (653)
                      ....++..++++|...+.||+|+||.||+|....+++.||+|++....  ....+.+.+|+.++++++|+||+++++++.
T Consensus         7 ~~~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~   86 (345)
T cd07877           7 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT   86 (345)
T ss_pred             hHHHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeee
Confidence            345667788899999999999999999999988889999999986532  233567888999999999999999999875


Q ss_pred             cc------ceeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCC
Q 048419          398 KQ------DELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTY  471 (653)
Q Consensus       398 ~~------~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~  471 (653)
                      ..      ...+++++++ +++|.+++...      .+++..++.++.|+++||+|||+   ++++||||||+||+++++
T Consensus        87 ~~~~~~~~~~~~lv~~~~-~~~L~~~~~~~------~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIll~~~  156 (345)
T cd07877          87 PARSLEEFNDVYLVTHLM-GADLNNIVKCQ------KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNED  156 (345)
T ss_pred             ecccccccccEEEEehhc-ccCHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCChHHEEEcCC
Confidence            43      3467888887 78998877542      38899999999999999999999   899999999999999999


Q ss_pred             CcEEEEeecCcccccCCCCCcccccccCCcccCcccccc-CCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHH
Q 048419          472 LNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRT-GKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDW  550 (653)
Q Consensus       472 ~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~  550 (653)
                      +.+||+|||+++....    ......++..|+|||.+.+ ..++.++|||||||++|||++|+.||.........  ...
T Consensus       157 ~~~kl~dfg~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~--~~~  230 (345)
T cd07877         157 CELKILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL--KLI  230 (345)
T ss_pred             CCEEEecccccccccc----cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH--HHH
Confidence            9999999999876432    2233467889999998866 46788999999999999999999998654332211  111


Q ss_pred             HHhh----------hcccchhHh---hhhccC----cCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          551 VKEL----------HLEGEITQA---IDQTLD----YYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       551 ~~~~----------~~~~~~~~~---~d~~l~----~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                      +...          .........   +.....    .........+.+++.+|++.||.+||++.+++++-.
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~  302 (345)
T cd07877         231 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY  302 (345)
T ss_pred             HHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcChh
Confidence            1100          000000000   000000    000012456889999999999999999999998754

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=100.00  E-value=6.3e-34  Score=297.38  Aligned_cols=251  Identities=29%  Similarity=0.372  Sum_probs=200.0

Q ss_pred             CcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC---chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEe
Q 048419          331 GFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN---SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYD  407 (653)
Q Consensus       331 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E  407 (653)
                      .|...+.||+|+||.||+|+...++..+|+|.+...   .....+.+.+|+++++.++|+|++++++++......++|+|
T Consensus        16 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   95 (308)
T cd06634          16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME   95 (308)
T ss_pred             HHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEE
Confidence            366678899999999999999888999999998642   33345678899999999999999999999999999999999


Q ss_pred             ccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccC
Q 048419          408 YVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEH  487 (653)
Q Consensus       408 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~  487 (653)
                      |+. |+|.+++....    ..+++.++..++.|++.||.|||+   ++++|+||+|+||+++.++.+||+|||++.....
T Consensus        96 ~~~-~~l~~~~~~~~----~~l~~~~~~~~~~~l~~~l~~LH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~  167 (308)
T cd06634          96 YCL-GSASDLLEVHK----KPLQEVEIAAVTHGALQGLAYLHS---HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP  167 (308)
T ss_pred             ccC-CCHHHHHHHcC----CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHhEEECCCCcEEECCcccceeecC
Confidence            996 58877775432    347889999999999999999999   8999999999999999999999999999876532


Q ss_pred             CCCCcccccccCCcccCccccc---cCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhh
Q 048419          488 GANPQTTHIVGTLGYLAPELTR---TGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAI  564 (653)
Q Consensus       488 ~~~~~~~~~~gt~~y~aPE~~~---~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  564 (653)
                      .     ....++..|+|||.+.   ...++.++|||||||++|||++|+.|+..........  .+..     ...    
T Consensus       168 ~-----~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~--~~~~-----~~~----  231 (308)
T cd06634         168 A-----NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALY--HIAQ-----NES----  231 (308)
T ss_pred             c-----ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHH--HHhh-----cCC----
Confidence            1     2345788999999874   3567889999999999999999999986543221111  1110     000    


Q ss_pred             hhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcCCC
Q 048419          565 DQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLGDS  608 (653)
Q Consensus       565 d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  608 (653)
                       +  ..........+.+++.+||+.+|.+||++.+++++.....
T Consensus       232 -~--~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~  272 (308)
T cd06634         232 -P--ALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLR  272 (308)
T ss_pred             -C--CcCcccccHHHHHHHHHHhhCCcccCCCHHHHhhCccccc
Confidence             0  0011123466889999999999999999999998765443

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=100.00  E-value=4.8e-34  Score=296.46  Aligned_cols=255  Identities=26%  Similarity=0.388  Sum_probs=197.5

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc-hhhHHHHHHHHHHHhhcC-CCceeeeeeeecccceeEEEEe
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS-QQGMKEFVAEIMSMGRLR-HRNLVQLHGWCRKQDELLLVYD  407 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lV~E  407 (653)
                      ++|...+.||+|++|.||+|.+..+++.||||.+.... .....++..|+..+.++. |+||++++++|.+....+++||
T Consensus        15 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e   94 (296)
T cd06618          15 NDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICME   94 (296)
T ss_pred             chheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEee
Confidence            45777899999999999999998889999999996543 334456777887777775 9999999999999999999999


Q ss_pred             ccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccC
Q 048419          408 YVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEH  487 (653)
Q Consensus       408 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~  487 (653)
                      |++ ++|.+++....    ..+++..+..++.|++.||+|||+.  .+|+||||+|+||++++++.+||+|||++.....
T Consensus        95 ~~~-~~l~~l~~~~~----~~l~~~~~~~i~~~i~~~l~~lH~~--~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~  167 (296)
T cd06618          95 LMS-TCLDKLLKRIQ----GPIPEDILGKMTVAIVKALHYLKEK--HGVIHRDVKPSNILLDASGNVKLCDFGISGRLVD  167 (296)
T ss_pred             ccC-cCHHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhh--CCEecCCCcHHHEEEcCCCCEEECccccchhccC
Confidence            985 47777765432    3589999999999999999999972  4899999999999999999999999999876543


Q ss_pred             CCCCcccccccCCcccCccccccCC----CCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHh
Q 048419          488 GANPQTTHIVGTLGYLAPELTRTGK----ATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQA  563 (653)
Q Consensus       488 ~~~~~~~~~~gt~~y~aPE~~~~~~----~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~  563 (653)
                      ...  .....++..|+|||.+.+..    ++.++||||||+++|||++|+.||.......+ .+......     ..   
T Consensus       168 ~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~-~~~~~~~~-----~~---  236 (296)
T cd06618         168 SKA--KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFE-VLTKILQE-----EP---  236 (296)
T ss_pred             CCc--ccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHH-HHHHHhcC-----CC---
Confidence            221  12235778999999987554    78899999999999999999999975322111 11111100     00   


Q ss_pred             hhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          564 IDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       564 ~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                        +.+. ........+.+++.+||+.||.+||++.+++++..
T Consensus       237 --~~~~-~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~  275 (296)
T cd06618         237 --PSLP-PNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPF  275 (296)
T ss_pred             --CCCC-CCCCCCHHHHHHHHHHccCChhhCCCHHHHhcChh
Confidence              0000 00013456899999999999999999999998754

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>PHA02882 putative serine/threonine kinase; Provisional

Probab=100.00  E-value=6.1e-34  Score=295.48  Aligned_cols=257  Identities=19%  Similarity=0.249  Sum_probs=187.0

Q ss_pred             hcCcCcceeeeeeCcEEEEEEEeCCC---CcEEEEEEeccCchhhH-----------HHHHHHHHHHhhcCCCceeeeee
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGLMPSL---GLEVAIKRIGHNSQQGM-----------KEFVAEIMSMGRLRHRNLVQLHG  394 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~~~~~---~~~vavK~~~~~~~~~~-----------~~~~~E~~~l~~l~H~niv~l~g  394 (653)
                      .++|...++||+|+||.||+|...++   +..+|+|..........           .....+...+..+.|+|++++++
T Consensus        11 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~   90 (294)
T PHA02882         11 GKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYG   90 (294)
T ss_pred             CCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEE
Confidence            36788999999999999999998776   56777776433221110           11223444566678999999998


Q ss_pred             eecccc----eeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcC
Q 048419          395 WCRKQD----ELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDT  470 (653)
Q Consensus       395 ~~~~~~----~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~  470 (653)
                      .+....    ..++++|++.. ++.+.+...     ...++..+..++.|++.||+|||+   ++|+||||||+|||++.
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~---~~iiHrDiKp~Nill~~  161 (294)
T PHA02882         91 CGSFKRCRMYYRFILLEKLVE-NTKEIFKRI-----KCKNKKLIKNIMKDMLTTLEYIHE---HGISHGDIKPENIMVDG  161 (294)
T ss_pred             eeeEecCCceEEEEEEehhcc-CHHHHHHhh-----ccCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcC
Confidence            765543    34677887643 565555432     224677888999999999999999   89999999999999999


Q ss_pred             CCcEEEEeecCcccccCCCC------CcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhH
Q 048419          471 YLNAKLGDFGLAKIYEHGAN------PQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAE  544 (653)
Q Consensus       471 ~~~~kl~DfGla~~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~  544 (653)
                      ++.+||+|||+++.+.....      .......||+.|+|||+..+..++.++|||||||+++||++|+.||........
T Consensus       162 ~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~  241 (294)
T PHA02882        162 NNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGN  241 (294)
T ss_pred             CCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchH
Confidence            99999999999986632211      112234699999999999999999999999999999999999999986532221


Q ss_pred             HH---HHHHHHhhhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          545 LL---LVDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       545 ~~---l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                      ..   ..++.... ..++        +.  .....+.+.+++..|++.+|++||++.++++.++
T Consensus       242 ~~~~~~~~~~~~~-~~~~--------~~--~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~~  294 (294)
T PHA02882        242 LIHAAKCDFIKRL-HEGK--------IK--IKNANKFIYDFIECVTKLSYEEKPDYDALIKIFD  294 (294)
T ss_pred             HHHHhHHHHHHHh-hhhh--------hc--cCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhhC
Confidence            11   01111111 1111        00  0112467889999999999999999999998763

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=100.00  E-value=8e-34  Score=299.33  Aligned_cols=261  Identities=21%  Similarity=0.265  Sum_probs=195.9

Q ss_pred             eeeeee--CcEEEEEEEeCCCCcEEEEEEeccC--chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEeccCC
Q 048419          336 NLVGSG--GFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPN  411 (653)
Q Consensus       336 ~~LG~G--~fg~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~  411 (653)
                      ..||+|  +||+||++.+..+|+.||+|.+...  ..+..+.+.+|+.+++.++|+||++++++|...+..++|+||+++
T Consensus         4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~   83 (328)
T cd08226           4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAY   83 (328)
T ss_pred             HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccC
Confidence            346666  9999999999888999999998643  233457888999999999999999999999999999999999999


Q ss_pred             CCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCCCC
Q 048419          412 GSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANP  491 (653)
Q Consensus       412 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~  491 (653)
                      ++|.+++....   ...+++..+..++.|++.||.|||+   ++++||||||+||+++.++.+|++||+.+.........
T Consensus        84 ~~l~~~l~~~~---~~~~~~~~~~~~~~qi~~aL~~lH~---~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~  157 (328)
T cd08226          84 GSANSLLKTYF---PEGMSEALIGNILFGALRGLNYLHQ---NGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQK  157 (328)
T ss_pred             CCHHHHHHhhc---ccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCcc
Confidence            99999987653   2348888999999999999999999   89999999999999999999999999865433221111


Q ss_pred             c------ccccccCCcccCccccccC--CCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhccc-----
Q 048419          492 Q------TTHIVGTLGYLAPELTRTG--KATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEG-----  558 (653)
Q Consensus       492 ~------~~~~~gt~~y~aPE~~~~~--~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~-----  558 (653)
                      .      .....++..|+|||++.+.  .++.++|||||||++|||++|+.||........  +...........     
T Consensus       158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~  235 (328)
T cd08226         158 AKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQM--LLQKLKGPPYSPLDITT  235 (328)
T ss_pred             ccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHH--HHHHhcCCCCCCccccc
Confidence            0      0112345679999998763  478999999999999999999999976543221  111110000000     


Q ss_pred             -----------------chh----------Hhhhhcc-CcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          559 -----------------EIT----------QAIDQTL-DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       559 -----------------~~~----------~~~d~~l-~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                                       .+.          ...+..+ ..........+.+++.+||+.||++|||+.|++++-
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~  309 (328)
T cd08226         236 FPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHA  309 (328)
T ss_pred             cchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCH
Confidence                             000          0000111 011223457789999999999999999999999755

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.1e-34  Score=300.45  Aligned_cols=252  Identities=22%  Similarity=0.367  Sum_probs=198.8

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEec--cCchhhHHHHHHHHHHHhhcC-CCceeeeeeeecccceeEEEE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIG--HNSQQGMKEFVAEIMSMGRLR-HRNLVQLHGWCRKQDELLLVY  406 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~--~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lV~  406 (653)
                      +.|++.++||+||.+.||++...+ ...+|+|++.  ..+.+....|.+|+..|.+|+ |.+|++|++|-..++.+|+||
T Consensus       361 ~~Yeilk~iG~GGSSkV~kV~~s~-~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvm  439 (677)
T KOG0596|consen  361 REYEILKQIGSGGSSKVFKVLNSD-KQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVM  439 (677)
T ss_pred             chhhHHHhhcCCCcceeeeeecCC-CcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEe
Confidence            457888999999999999998765 5667777764  346667889999999999995 999999999999999999999


Q ss_pred             eccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccccc
Q 048419          407 DYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE  486 (653)
Q Consensus       407 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~  486 (653)
                      ||- ..+|..+|.+...   ....| .+..+..|++.|+.++|.   .+|||.||||.|+|+- .|.+||+|||+|..+.
T Consensus       440 E~G-d~DL~kiL~k~~~---~~~~~-~lk~ywkqML~aV~~IH~---~gIVHSDLKPANFLlV-kG~LKLIDFGIA~aI~  510 (677)
T KOG0596|consen  440 ECG-DIDLNKILKKKKS---IDPDW-FLKFYWKQMLLAVKTIHQ---HGIVHSDLKPANFLLV-KGRLKLIDFGIANAIQ  510 (677)
T ss_pred             ecc-cccHHHHHHhccC---CCchH-HHHHHHHHHHHHHHHHHH---hceeecCCCcccEEEE-eeeEEeeeechhcccC
Confidence            986 5699999987652   22334 677899999999999999   8999999999999984 4789999999999776


Q ss_pred             CCCC-CcccccccCCcccCccccccC-----------CCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhh
Q 048419          487 HGAN-PQTTHIVGTLGYLAPELTRTG-----------KATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKEL  554 (653)
Q Consensus       487 ~~~~-~~~~~~~gt~~y~aPE~~~~~-----------~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~  554 (653)
                      .+.. ......+||+.||+||.+...           +..+++||||+||+||+|+.|+.||......       |    
T Consensus       511 ~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~-------~----  579 (677)
T KOG0596|consen  511 PDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQ-------I----  579 (677)
T ss_pred             ccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHH-------H----
Confidence            5433 233456899999999988533           3568999999999999999999999854321       1    


Q ss_pred             hcccchhHhhhhcc--CcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          555 HLEGEITQAIDQTL--DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       555 ~~~~~~~~~~d~~l--~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                         .++..+.|+.-  ..........+.+++..||+.||.+||++.|++++--
T Consensus       580 ---aKl~aI~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqhpF  629 (677)
T KOG0596|consen  580 ---AKLHAITDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQHPF  629 (677)
T ss_pred             ---HHHHhhcCCCccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcCcc
Confidence               12223333322  1111112233899999999999999999999998653

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=100.00  E-value=7.3e-34  Score=293.73  Aligned_cols=256  Identities=23%  Similarity=0.300  Sum_probs=199.4

Q ss_pred             CcCcceeeeeeCcEEEEEEEeC---CCCcEEEEEEeccCc----hhhHHHHHHHHHHHhhc-CCCceeeeeeeeccccee
Q 048419          331 GFGEQNLVGSGGFGRVYRGLMP---SLGLEVAIKRIGHNS----QQGMKEFVAEIMSMGRL-RHRNLVQLHGWCRKQDEL  402 (653)
Q Consensus       331 ~f~~~~~LG~G~fg~Vy~~~~~---~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~  402 (653)
                      +|+..+.||+|++|.||++...   .++..||||.+....    ....+.+.+|+.++.++ +|+||+++++.+...+..
T Consensus         1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~   80 (288)
T cd05583           1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL   80 (288)
T ss_pred             CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence            3677889999999999999853   357889999986432    22345688999999999 599999999999999999


Q ss_pred             EEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCc
Q 048419          403 LLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLA  482 (653)
Q Consensus       403 ~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla  482 (653)
                      ++||||+++++|.+++...     ..+++..+..++.|++++|.|||+   .+++|+||+|+||+++.++.++|+|||++
T Consensus        81 ~lv~e~~~~~~L~~~~~~~-----~~~~~~~~~~~~~ql~~~l~~lH~---~~~~H~dl~p~nil~~~~~~~~l~dfg~~  152 (288)
T cd05583          81 HLILDYVNGGELFTHLYQR-----EHFTESEVRVYIAEIVLALDHLHQ---LGIIYRDIKLENILLDSEGHVVLTDFGLS  152 (288)
T ss_pred             EEEEecCCCCcHHHHHhhc-----CCcCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEEEECccc
Confidence            9999999999999998653     347888999999999999999999   89999999999999999999999999998


Q ss_pred             ccccCCCCCcccccccCCcccCccccccCC--CCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccch
Q 048419          483 KIYEHGANPQTTHIVGTLGYLAPELTRTGK--ATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEI  560 (653)
Q Consensus       483 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~  560 (653)
                      +..............|+..|+|||.+.+..  .+.++||||||++++||++|..||........  ..+.......    
T Consensus       153 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~--~~~~~~~~~~----  226 (288)
T cd05583         153 KEFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNS--QSEISRRILK----  226 (288)
T ss_pred             cccccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccch--HHHHHHHHHc----
Confidence            865443222222345788999999987665  78899999999999999999999864321110  0011111000    


Q ss_pred             hHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          561 TQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       561 ~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                            .....+......+.+++.+||+.+|++|||+.++.+.|+-
T Consensus       227 ------~~~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~  266 (288)
T cd05583         227 ------SKPPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNH  266 (288)
T ss_pred             ------cCCCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcC
Confidence                  0001111223567899999999999999999888887754

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=100.00  E-value=7.4e-34  Score=299.52  Aligned_cols=266  Identities=25%  Similarity=0.329  Sum_probs=203.4

Q ss_pred             HHHHhhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC--chhhHHHHHHHHHHHhhcCCCceeeeeeeecc-cc
Q 048419          324 ELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRK-QD  400 (653)
Q Consensus       324 el~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~-~~  400 (653)
                      ++..++++|+..+.||+|+||.||++....++..||||++...  .....+.+..|++++++++|||++++++++.. .+
T Consensus         4 ~~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~   83 (328)
T cd07856           4 TVFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLE   83 (328)
T ss_pred             ceeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCC
Confidence            4456789999999999999999999999988999999988543  23345678899999999999999999998865 55


Q ss_pred             eeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeec
Q 048419          401 ELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFG  480 (653)
Q Consensus       401 ~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG  480 (653)
                      ..++++||+ +++|.+++...      .+++.....++.|++.||.|||+   ++++|+||+|+||++++++.+||+|||
T Consensus        84 ~~~lv~e~~-~~~L~~~~~~~------~~~~~~~~~~~~ql~~aL~~LH~---~~iiH~dl~p~Nili~~~~~~~l~dfg  153 (328)
T cd07856          84 DIYFVTELL-GTDLHRLLTSR------PLEKQFIQYFLYQILRGLKYVHS---AGVVHRDLKPSNILINENCDLKICDFG  153 (328)
T ss_pred             cEEEEeehh-ccCHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEeECCCCCEEeCccc
Confidence            789999998 56898887542      37788888999999999999999   899999999999999999999999999


Q ss_pred             CcccccCCCCCcccccccCCcccCcccccc-CCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHH-HHHH--------
Q 048419          481 LAKIYEHGANPQTTHIVGTLGYLAPELTRT-GKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELL-LVDW--------  550 (653)
Q Consensus       481 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~-l~~~--------  550 (653)
                      ++......    .....++..|+|||.+.+ ..++.++|||||||++|||++|+.||.......... +.+.        
T Consensus       154 ~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~  229 (328)
T cd07856         154 LARIQDPQ----MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDV  229 (328)
T ss_pred             cccccCCC----cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHH
Confidence            98754321    123356889999998765 568899999999999999999999997554322111 1111        


Q ss_pred             HHhhhcccchhHhhhhcc--CcCCH-----HHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          551 VKELHLEGEITQAIDQTL--DYYDL-----AEAELVLNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       551 ~~~~~~~~~~~~~~d~~l--~~~~~-----~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                      .... ..+...+.+....  ...+.     .....+.+++.+||+.+|++||++.+++.+-
T Consensus       230 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~  289 (328)
T cd07856         230 INTI-CSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHP  289 (328)
T ss_pred             HHhc-cchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCC
Confidence            1000 0011111111100  01111     1236789999999999999999999998764

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=100.00  E-value=8.5e-34  Score=293.55  Aligned_cols=253  Identities=23%  Similarity=0.314  Sum_probs=197.2

Q ss_pred             CcCcceeeeeeCcEEEEEEEeC---CCCcEEEEEEeccCc----hhhHHHHHHHHHHHhhc-CCCceeeeeeeeccccee
Q 048419          331 GFGEQNLVGSGGFGRVYRGLMP---SLGLEVAIKRIGHNS----QQGMKEFVAEIMSMGRL-RHRNLVQLHGWCRKQDEL  402 (653)
Q Consensus       331 ~f~~~~~LG~G~fg~Vy~~~~~---~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~  402 (653)
                      +|+..+.||+|+||.||++...   .+|..||+|++....    ....+.+.+|+.+++++ +|+||+++++++......
T Consensus         1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~   80 (290)
T cd05613           1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL   80 (290)
T ss_pred             CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence            4677899999999999999874   368899999986532    22346778899999999 599999999999988899


Q ss_pred             EEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCc
Q 048419          403 LLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLA  482 (653)
Q Consensus       403 ~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla  482 (653)
                      ++|+||+++++|.+++...     ..+++..+..++.|++.||.|||+   .+++||||+|+|||++.++.+||+|||++
T Consensus        81 ~lv~e~~~~~~L~~~l~~~-----~~l~~~~~~~~~~qi~~al~~lH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~~  152 (290)
T cd05613          81 HLILDYINGGELFTHLSQR-----ERFKEQEVQIYSGEIVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLS  152 (290)
T ss_pred             EEEEecCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeEECCCCCEEEeeCccc
Confidence            9999999999999998654     347888899999999999999999   99999999999999999999999999999


Q ss_pred             ccccCCCCCcccccccCCcccCccccccC--CCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccch
Q 048419          483 KIYEHGANPQTTHIVGTLGYLAPELTRTG--KATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEI  560 (653)
Q Consensus       483 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~  560 (653)
                      ...............|+..|+|||.+...  .++.++||||||+++|+|++|+.|+........  ..+........   
T Consensus       153 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~--~~~~~~~~~~~---  227 (290)
T cd05613         153 KEFHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNS--QAEISRRILKS---  227 (290)
T ss_pred             eecccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCcccc--HHHHHHHhhcc---
Confidence            86544322223345688999999998753  467899999999999999999999864321110  11111111000   


Q ss_pred             hHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCC-----CHHHHHHH
Q 048419          561 TQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRP-----DMRRVVEF  603 (653)
Q Consensus       561 ~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~  603 (653)
                             ...++......+.+++.+||+.+|.+||     ++.+++.+
T Consensus       228 -------~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~  268 (290)
T cd05613         228 -------EPPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKH  268 (290)
T ss_pred             -------CCCCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcC
Confidence                   0011112345678999999999999997     67777654

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=100.00  E-value=7.3e-35  Score=277.92  Aligned_cols=249  Identities=26%  Similarity=0.359  Sum_probs=200.0

Q ss_pred             ceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC-chhhHHHHHHHHHHHhhcC-CCceeeeeeeecccceeEEEEeccCCC
Q 048419          335 QNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN-SQQGMKEFVAEIMSMGRLR-HRNLVQLHGWCRKQDELLLVYDYVPNG  412 (653)
Q Consensus       335 ~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lV~E~~~~g  412 (653)
                      ...||.|..|.|+++..+.+|...|||.+... +.+..+.++..+.++..-+ +|+||+.+|||..+...++.||.| ..
T Consensus        97 l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelM-s~  175 (391)
T KOG0983|consen   97 LGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELM-ST  175 (391)
T ss_pred             HHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHH-HH
Confidence            55699999999999999999999999999765 5666778888888777765 899999999999999999999999 44


Q ss_pred             CchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCCCCc
Q 048419          413 SLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQ  492 (653)
Q Consensus       413 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~  492 (653)
                      .++.+|...    ..++++..+-++...+..||.||.+.  ++|+|||+||+|||+|+.|++||||||++..+-...  .
T Consensus       176 C~ekLlkri----k~piPE~ilGk~tva~v~AL~YLKeK--H~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSk--A  247 (391)
T KOG0983|consen  176 CAEKLLKRI----KGPIPERILGKMTVAIVKALYYLKEK--HGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSK--A  247 (391)
T ss_pred             HHHHHHHHh----cCCchHHhhhhhHHHHHHHHHHHHHh--cceeecccCccceEEccCCCEEeecccccceeeccc--c
Confidence            777777654    35688888889999999999999984  899999999999999999999999999998664432  3


Q ss_pred             ccccccCCcccCccccc---cCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhccC
Q 048419          493 TTHIVGTLGYLAPELTR---TGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLD  569 (653)
Q Consensus       493 ~~~~~gt~~y~aPE~~~---~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~  569 (653)
                      .+...|.+.|||||.+.   ..+|+..+||||||+.|+||.||+.||...+-+-+ .+...          .+-..+.|.
T Consensus       248 htrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe-~ltkv----------ln~ePP~L~  316 (391)
T KOG0983|consen  248 HTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFE-VLTKV----------LNEEPPLLP  316 (391)
T ss_pred             cccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHH-HHHHH----------HhcCCCCCC
Confidence            34557899999999885   34688899999999999999999999986433211 11111          111112221


Q ss_pred             cCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          570 YYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       570 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                       ........+.+++..||..|+.+||...+++++-
T Consensus       317 -~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h~  350 (391)
T KOG0983|consen  317 -GHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEHP  350 (391)
T ss_pred             -cccCcCHHHHHHHHHHhhcCcccCcchHHHhcCc
Confidence             1112457789999999999999999999999754

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=100.00  E-value=6.2e-34  Score=301.93  Aligned_cols=265  Identities=21%  Similarity=0.293  Sum_probs=199.0

Q ss_pred             hcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeeccc---------
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQ---------  399 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~---------  399 (653)
                      ..+|...+.||.|+||.||+|....++..||+|++........+.+.+|++++++++|+||+++++.+...         
T Consensus         4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~   83 (342)
T cd07854           4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVG   83 (342)
T ss_pred             CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccc
Confidence            36788999999999999999999989999999999776666677889999999999999999999776543         


Q ss_pred             -----ceeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEc-CCCc
Q 048419          400 -----DELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLD-TYLN  473 (653)
Q Consensus       400 -----~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~-~~~~  473 (653)
                           ...++|+||++ ++|.+++...      .+++...+.++.||+.||.|||+   .+++||||||+||+++ .++.
T Consensus        84 ~~~~~~~~~lv~e~~~-~~L~~~~~~~------~l~~~~~~~~~~qi~~aL~~LH~---~givH~dikp~Nili~~~~~~  153 (342)
T cd07854          84 SLTELNSVYIVQEYME-TDLANVLEQG------PLSEEHARLFMYQLLRGLKYIHS---ANVLHRDLKPANVFINTEDLV  153 (342)
T ss_pred             cccccceEEEEeeccc-ccHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEcCCCce
Confidence                 35789999997 5888877432      37899999999999999999999   8999999999999997 4567


Q ss_pred             EEEEeecCcccccCCCCC--cccccccCCcccCcccccc-CCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHH
Q 048419          474 AKLGDFGLAKIYEHGANP--QTTHIVGTLGYLAPELTRT-GKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDW  550 (653)
Q Consensus       474 ~kl~DfGla~~~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~  550 (653)
                      +||+|||+++........  ......++..|+|||.+.. ..++.++|||||||++|||++|+.||..........  ..
T Consensus       154 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~--~~  231 (342)
T cd07854         154 LKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQ--LI  231 (342)
T ss_pred             EEECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH--HH
Confidence            899999999765332111  1122357889999998654 457889999999999999999999997654322211  11


Q ss_pred             HHhhhc--c---c----chhHhhh--hccCcCC-----HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          551 VKELHL--E---G----EITQAID--QTLDYYD-----LAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       551 ~~~~~~--~---~----~~~~~~d--~~l~~~~-----~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                      ......  .   .    .......  .......     ......+.+++.+||+.||.+||++.|++++-.
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h~~  302 (342)
T cd07854         232 LESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPY  302 (342)
T ss_pred             HHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCCCc
Confidence            110000  0   0    0000000  0000000     112356889999999999999999999997543

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=100.00  E-value=1.1e-33  Score=291.05  Aligned_cols=244  Identities=24%  Similarity=0.303  Sum_probs=189.9

Q ss_pred             eeeeeCcEEEEEEEeCCCCcEEEEEEeccCch---hhHHHHHHHHH---HHhhcCCCceeeeeeeecccceeEEEEeccC
Q 048419          337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQ---QGMKEFVAEIM---SMGRLRHRNLVQLHGWCRKQDELLLVYDYVP  410 (653)
Q Consensus       337 ~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~---~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~  410 (653)
                      +||+|+||.||++....+++.||+|.+.....   .....+..|..   .++...|+|++++++++...+..++||||++
T Consensus         1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~   80 (278)
T cd05606           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN   80 (278)
T ss_pred             CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence            48999999999999988899999999865421   22223344443   4445579999999999999999999999999


Q ss_pred             CCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCCC
Q 048419          411 NGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGAN  490 (653)
Q Consensus       411 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~  490 (653)
                      +++|..++...     ..+++.++..++.|++.||.|||+   ++++|+||||+||+++.++.+||+|||++....... 
T Consensus        81 g~~L~~~l~~~-----~~l~~~~~~~~~~ql~~~l~~lH~---~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~-  151 (278)
T cd05606          81 GGDLHYHLSQH-----GVFSEAEMRFYAAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK-  151 (278)
T ss_pred             CCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCEEcCCCCHHHEEECCCCCEEEccCcCccccCccC-
Confidence            99999888643     358999999999999999999999   899999999999999999999999999987553321 


Q ss_pred             CcccccccCCcccCccccccC-CCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhccC
Q 048419          491 PQTTHIVGTLGYLAPELTRTG-KATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLD  569 (653)
Q Consensus       491 ~~~~~~~gt~~y~aPE~~~~~-~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~  569 (653)
                        .....|+..|+|||.+.++ .++.++||||+||++|||++|+.||...........    .....      .....+ 
T Consensus       152 --~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~----~~~~~------~~~~~~-  218 (278)
T cd05606         152 --PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI----DRMTL------TMAVEL-  218 (278)
T ss_pred             --CcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHH----HHHhh------ccCCCC-
Confidence              1234689999999998754 588999999999999999999999976432111110    00000      000111 


Q ss_pred             cCCHHHHHHHHHHHHHcCCCCCCCCC-----CHHHHHHHH
Q 048419          570 YYDLAEAELVLNLGLFCSAPNPVYRP-----DMRRVVEFL  604 (653)
Q Consensus       570 ~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~L  604 (653)
                        +......+.+++.+|+..+|.+||     ++.+++++-
T Consensus       219 --~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~  256 (278)
T cd05606         219 --PDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHP  256 (278)
T ss_pred             --CCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhCc
Confidence              111246788999999999999999     999998754

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=100.00  E-value=2e-33  Score=294.30  Aligned_cols=248  Identities=27%  Similarity=0.380  Sum_probs=197.2

Q ss_pred             cCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC---chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEec
Q 048419          332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN---SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDY  408 (653)
Q Consensus       332 f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~  408 (653)
                      |...+.||+|+||.||+|+...++..|++|++...   .....+.+.+|++.+++++|+|++++++++.+.+..++||||
T Consensus        23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  102 (313)
T cd06633          23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY  102 (313)
T ss_pred             hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence            44567899999999999999888999999998643   223446788999999999999999999999999999999999


Q ss_pred             cCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCC
Q 048419          409 VPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHG  488 (653)
Q Consensus       409 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~  488 (653)
                      +. ++|.+++....    ..+++.+++.++.||+.+|.|||+   ++++|+||+|+||+++.++.+||+|||++..... 
T Consensus       103 ~~-~~l~~~l~~~~----~~l~~~~~~~~~~qi~~al~~LH~---~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~-  173 (313)
T cd06633         103 CL-GSASDLLEVHK----KPLQEVEIAAITHGALQGLAYLHS---HNMIHRDIKAGNILLTEPGQVKLADFGSASKSSP-  173 (313)
T ss_pred             CC-CCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCChhhEEECCCCCEEEeecCCCcccCC-
Confidence            96 57777775432    358999999999999999999999   8999999999999999999999999999864321 


Q ss_pred             CCCcccccccCCcccCccccc---cCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhh
Q 048419          489 ANPQTTHIVGTLGYLAPELTR---TGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAID  565 (653)
Q Consensus       489 ~~~~~~~~~gt~~y~aPE~~~---~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d  565 (653)
                          .....|+..|+|||++.   ...++.++|||||||++|||++|+.|+..........   ....    .....   
T Consensus       174 ----~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~---~~~~----~~~~~---  239 (313)
T cd06633         174 ----ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALY---HIAQ----NDSPT---  239 (313)
T ss_pred             ----CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHH---HHHh----cCCCC---
Confidence                22346888999999974   4568889999999999999999999987654322111   1100    00000   


Q ss_pred             hccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          566 QTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       566 ~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                        .  ........+.+++.+||+.+|.+||++.+++++-..
T Consensus       240 --~--~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~~~~  276 (313)
T cd06633         240 --L--QSNEWTDSFRGFVDYCLQKIPQERPASAELLRHDFV  276 (313)
T ss_pred             --C--CccccCHHHHHHHHHHccCChhhCcCHHHHhcCccc
Confidence              0  011123458899999999999999999999976543

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=100.00  E-value=5.2e-34  Score=297.77  Aligned_cols=267  Identities=25%  Similarity=0.307  Sum_probs=197.5

Q ss_pred             hcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCch--hhHHHHHHHHHHHhhcCCCceeeeeeeecccc------
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQ--QGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQD------  400 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~------  400 (653)
                      .++|+..+.||+|+||.||+|....+++.+|||++.....  .....+.+|++++++++|+||+++++++.+..      
T Consensus         7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   86 (311)
T cd07866           7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK   86 (311)
T ss_pred             cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence            4789999999999999999999988899999999864422  22345678999999999999999999874433      


Q ss_pred             --eeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEe
Q 048419          401 --ELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGD  478 (653)
Q Consensus       401 --~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D  478 (653)
                        .+++|+||+.+ +|...+...    ...+++.++..++.|+++||.|||+   ++++|+||||+||++++++.+||+|
T Consensus        87 ~~~~~lv~~~~~~-~l~~~~~~~----~~~~~~~~~~~i~~~l~~al~~lH~---~~i~H~dl~p~nil~~~~~~~~l~d  158 (311)
T cd07866          87 RGSVYMVTPYMDH-DLSGLLENP----SVKLTESQIKCYMLQLLEGINYLHE---NHILHRDIKAANILIDNQGILKIAD  158 (311)
T ss_pred             CceEEEEEecCCc-CHHHHHhcc----ccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEECc
Confidence              46999999965 677766543    2358999999999999999999999   8999999999999999999999999


Q ss_pred             ecCcccccCCCCC----------cccccccCCcccCccccccC-CCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHH
Q 048419          479 FGLAKIYEHGANP----------QTTHIVGTLGYLAPELTRTG-KATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLL  547 (653)
Q Consensus       479 fGla~~~~~~~~~----------~~~~~~gt~~y~aPE~~~~~-~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l  547 (653)
                      ||+++........          ......+++.|+|||.+.+. .++.++|||||||++|||++|+.||...........
T Consensus       159 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~  238 (311)
T cd07866         159 FGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHL  238 (311)
T ss_pred             CccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence            9999865432211          11223567889999987654 578999999999999999999999976544322111


Q ss_pred             HHHHHhhhcccc------hhHhhh--------hccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 048419          548 VDWVKELHLEGE------ITQAID--------QTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEF  603 (653)
Q Consensus       548 ~~~~~~~~~~~~------~~~~~d--------~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  603 (653)
                      ............      +....+        +.+..........+.+++.+||+.||.+|||+.|++.+
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~  308 (311)
T cd07866         239 IFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEH  308 (311)
T ss_pred             HHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcC
Confidence            111100000000      000000        00000001122568899999999999999999999864

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=100.00  E-value=9e-34  Score=299.80  Aligned_cols=269  Identities=25%  Similarity=0.289  Sum_probs=200.6

Q ss_pred             hcCcCc-ceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhh--------------HHHHHHHHHHHhhcCCCceeeee
Q 048419          329 TKGFGE-QNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQG--------------MKEFVAEIMSMGRLRHRNLVQLH  393 (653)
Q Consensus       329 t~~f~~-~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~--------------~~~~~~E~~~l~~l~H~niv~l~  393 (653)
                      .++|.. .+.||+|+||.||+|.+..+++.||||.+.......              ...+.+|++++++++|+||++++
T Consensus         7 ~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~   86 (335)
T PTZ00024          7 SERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLV   86 (335)
T ss_pred             ccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeee
Confidence            345543 467999999999999998889999999986542211              12477899999999999999999


Q ss_pred             eeecccceeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCc
Q 048419          394 GWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLN  473 (653)
Q Consensus       394 g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~  473 (653)
                      +++...+..++||||++ |+|.+++...     ..+++.....++.|++.||.|||+   .+++|+||+|+||+++.++.
T Consensus        87 ~~~~~~~~~~lv~e~~~-~~l~~~l~~~-----~~~~~~~~~~~~~ql~~aL~~LH~---~~i~H~dl~~~nill~~~~~  157 (335)
T PTZ00024         87 DVYVEGDFINLVMDIMA-SDLKKVVDRK-----IRLTESQVKCILLQILNGLNVLHK---WYFMHRDLSPANIFINSKGI  157 (335)
T ss_pred             EEEecCCcEEEEEeccc-cCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCeecccccHHHeEECCCCC
Confidence            99999999999999996 6898888643     348889999999999999999999   89999999999999999999


Q ss_pred             EEEEeecCcccccCCC-------------CCcccccccCCcccCccccccC-CCCCccceeehHHHHHHHHhCCCCCChh
Q 048419          474 AKLGDFGLAKIYEHGA-------------NPQTTHIVGTLGYLAPELTRTG-KATTSTDVYSYGILMLEVACGRRSIEPQ  539 (653)
Q Consensus       474 ~kl~DfGla~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~~-~~~~ksDV~s~Gvvl~elltG~~p~~~~  539 (653)
                      +||+|||++.......             ........++..|+|||.+.+. .++.++|||||||++|||++|+.||...
T Consensus       158 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~  237 (335)
T PTZ00024        158 CKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGE  237 (335)
T ss_pred             EEECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence            9999999998654111             1111223467889999998764 4688999999999999999999999765


Q ss_pred             hhhhHHH-HHHHHHhhhcccchhHhhh------------hccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          540 KAAAELL-LVDWVKELHLEGEITQAID------------QTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       540 ~~~~~~~-l~~~~~~~~~~~~~~~~~d------------~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                      ...+... +...... .......+..+            +............+.+++.+||+.+|++||++.|++.+..-
T Consensus       238 ~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~~~  316 (335)
T PTZ00024        238 NEIDQLGRIFELLGT-PNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHEYF  316 (335)
T ss_pred             CHHHHHHHHHHHhCC-CchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcCccc
Confidence            5432211 1111000 00000000000            00000001124668899999999999999999999987654


Q ss_pred             C
Q 048419          607 D  607 (653)
Q Consensus       607 ~  607 (653)
                      .
T Consensus       317 ~  317 (335)
T PTZ00024        317 K  317 (335)
T ss_pred             C
Confidence            3

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=100.00  E-value=2e-34  Score=321.99  Aligned_cols=256  Identities=27%  Similarity=0.411  Sum_probs=196.6

Q ss_pred             HHhhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC-chhhHHHHHHHHHHHhhcCCCceeeeeeeecc------
Q 048419          326 ASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN-SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRK------  398 (653)
Q Consensus       326 ~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~------  398 (653)
                      ...-.+|++.++||+||||.|||++.+-+|+.||||++... +........+|+..+.+|+|||||+++..+.+      
T Consensus       475 SRY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~  554 (1351)
T KOG1035|consen  475 SRYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELT  554 (1351)
T ss_pred             hhHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccc
Confidence            45667899999999999999999999999999999999755 44556778899999999999999998653100      


Q ss_pred             --------------------------------------------------------------------------------
Q 048419          399 --------------------------------------------------------------------------------  398 (653)
Q Consensus       399 --------------------------------------------------------------------------------  398 (653)
                                                                                                      
T Consensus       555 ~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS  634 (1351)
T KOG1035|consen  555 VLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTS  634 (1351)
T ss_pred             cccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccccc
Confidence                                                                                            


Q ss_pred             -------------------------c--------ceeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHH
Q 048419          399 -------------------------Q--------DELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSL  445 (653)
Q Consensus       399 -------------------------~--------~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L  445 (653)
                                               +        -.+||-||||+...|.+++.++...    -.-...|+++++|+.||
T Consensus       635 ~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~----~~~d~~wrLFreIlEGL  710 (1351)
T KOG1035|consen  635 DSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFN----SQRDEAWRLFREILEGL  710 (1351)
T ss_pred             ccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccc----hhhHHHHHHHHHHHHHH
Confidence                                     0        1257889999887777777664321    03567789999999999


Q ss_pred             HHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccccc-----------------CCCCCcccccccCCcccCcccc
Q 048419          446 LYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE-----------------HGANPQTTHIVGTLGYLAPELT  508 (653)
Q Consensus       446 ~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~-----------------~~~~~~~~~~~gt~~y~aPE~~  508 (653)
                      .|+|+   ++||||||||.||+|+++..+||+|||+|+...                 .......+..+||.-|+|||++
T Consensus       711 aYIH~---~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll  787 (1351)
T KOG1035|consen  711 AYIHD---QGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELL  787 (1351)
T ss_pred             HHHHh---CceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHh
Confidence            99999   899999999999999999999999999998721                 0011234567899999999998


Q ss_pred             ccC---CCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhccCcCCHHHHHHHHHHHHH
Q 048419          509 RTG---KATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLF  585 (653)
Q Consensus       509 ~~~---~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~  585 (653)
                      .+.   +|+.|+|+||+||+|+||+.   ||....+.  ....    .....+.++..     ..+..+++..-..++.+
T Consensus       788 ~~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsMER--a~iL----~~LR~g~iP~~-----~~f~~~~~~~e~slI~~  853 (1351)
T KOG1035|consen  788 SDTSSNKYNSKIDMYSLGIVLFEMLY---PFGTSMER--ASIL----TNLRKGSIPEP-----ADFFDPEHPEEASLIRW  853 (1351)
T ss_pred             cccccccccchhhhHHHHHHHHHHhc---cCCchHHH--HHHH----HhcccCCCCCC-----cccccccchHHHHHHHH
Confidence            754   59999999999999999985   45433221  1111    11223433332     12233455667799999


Q ss_pred             cCCCCCCCCCCHHHHHH
Q 048419          586 CSAPNPVYRPDMRRVVE  602 (653)
Q Consensus       586 Cl~~dP~~RPs~~evl~  602 (653)
                      +++.||.+|||+.|++.
T Consensus       854 Ll~hdP~kRPtA~eLL~  870 (1351)
T KOG1035|consen  854 LLSHDPSKRPTATELLN  870 (1351)
T ss_pred             HhcCCCccCCCHHHHhh
Confidence            99999999999999875

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=100.00  E-value=1.7e-33  Score=294.66  Aligned_cols=259  Identities=22%  Similarity=0.242  Sum_probs=192.3

Q ss_pred             eeeeeCcEEEEEEEeCCCCcEEEEEEeccC--chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEeccCCCCc
Q 048419          337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSL  414 (653)
Q Consensus       337 ~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL  414 (653)
                      .+|.|++  ||.++...+++.||||++...  ..+..+.+.+|++.+++++|+||+++++++.+.+..+++|||+++++|
T Consensus         9 ~~~~~~~--v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l   86 (314)
T cd08216           9 CFEDLMI--VHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSC   86 (314)
T ss_pred             hhcCCce--EEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCH
Confidence            3444444  455555557899999998654  445567899999999999999999999999999999999999999999


Q ss_pred             hhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCCC----
Q 048419          415 DKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGAN----  490 (653)
Q Consensus       415 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~----  490 (653)
                      .+++....   ...+++.....++.|+++||.|||+   ++|+|+||||+||+++.++.+||+|||.+........    
T Consensus        87 ~~~l~~~~---~~~~~~~~~~~~~~~l~~~L~~LH~---~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~  160 (314)
T cd08216          87 EDLLKTHF---PEGLPELAIAFILKDVLNALDYIHS---KGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRV  160 (314)
T ss_pred             HHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCcceEEEecCCceEEecCccceeeccccccccc
Confidence            99997643   2347888899999999999999999   8999999999999999999999999998875432111    


Q ss_pred             --CcccccccCCcccCccccccC--CCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhh----ccc----
Q 048419          491 --PQTTHIVGTLGYLAPELTRTG--KATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELH----LEG----  558 (653)
Q Consensus       491 --~~~~~~~gt~~y~aPE~~~~~--~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~----~~~----  558 (653)
                        .......++..|+|||.+...  .++.++|||||||++|||++|+.||........  +.+......    ...    
T Consensus       161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~~  238 (314)
T cd08216         161 VHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQM--LLEKVRGTVPCLLDKSTYPL  238 (314)
T ss_pred             cccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHhccCccccccCchhh
Confidence              111223567789999998653  578899999999999999999999976433211  111111000    000    


Q ss_pred             ---chhH----hhhhcc-----CcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          559 ---EITQ----AIDQTL-----DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       559 ---~~~~----~~d~~l-----~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                         .+..    ..+...     ..........+.+++.+||+.||++|||+.+++++-.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~  297 (314)
T cd08216         239 YEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSF  297 (314)
T ss_pred             hcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCch
Confidence               0000    000000     1112233467889999999999999999999998653

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=2e-35  Score=331.35  Aligned_cols=259  Identities=29%  Similarity=0.422  Sum_probs=209.3

Q ss_pred             HHhhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC--chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeE
Q 048419          326 ASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELL  403 (653)
Q Consensus       326 ~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~  403 (653)
                      ...+-++.....||.|.||.||.|...++|+..|+|.+...  .....+...+|+.++..|+|||+|+++|.-..++..+
T Consensus      1231 snV~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~ 1310 (1509)
T KOG4645|consen 1231 SNVTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVY 1310 (1509)
T ss_pred             ccceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHH
Confidence            34555677788999999999999999999999999988643  3344567789999999999999999999999999999


Q ss_pred             EEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcc
Q 048419          404 LVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK  483 (653)
Q Consensus       404 lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~  483 (653)
                      |.||||.+|+|.+++....     .+++.....+..|++.|+.|||+   .+||||||||.||+|+.+|.+|++|||.|.
T Consensus      1311 IFMEyC~~GsLa~ll~~gr-----i~dE~vt~vyt~qll~gla~LH~---~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ 1382 (1509)
T KOG4645|consen 1311 IFMEYCEGGSLASLLEHGR-----IEDEMVTRVYTKQLLEGLAYLHE---HGIVHRDIKPANILLDFNGLIKYGDFGSAV 1382 (1509)
T ss_pred             HHHHHhccCcHHHHHHhcc-----hhhhhHHHHHHHHHHHHHHHHHh---cCceecCCCccceeeecCCcEEeeccccee
Confidence            9999999999999996542     35555666788999999999999   999999999999999999999999999999


Q ss_pred             cccCCC---CCcccccccCCcccCccccccCC---CCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhh-c
Q 048419          484 IYEHGA---NPQTTHIVGTLGYLAPELTRTGK---ATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELH-L  556 (653)
Q Consensus       484 ~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~---~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~-~  556 (653)
                      .+....   ........||+.|||||++.+.+   ...+.||||+|||++||+||++||...+..       |....+ .
T Consensus      1383 ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne-------~aIMy~V~ 1455 (1509)
T KOG4645|consen 1383 KIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNE-------WAIMYHVA 1455 (1509)
T ss_pred             EecCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccch-------hHHHhHHh
Confidence            876542   12334568999999999996543   456899999999999999999999876542       211111 1


Q ss_pred             ccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcCC
Q 048419          557 EGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLGD  607 (653)
Q Consensus       557 ~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  607 (653)
                      .|..++        .+......-.+++..||..||.+|.++.|++++--+.
T Consensus      1456 ~gh~Pq--------~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~f~~ 1498 (1509)
T KOG4645|consen 1456 AGHKPQ--------IPERLSSEGRDFLEHCLEQDPKMRWTASQLLEHAFGK 1498 (1509)
T ss_pred             ccCCCC--------CchhhhHhHHHHHHHHHhcCchhhhHHHHHHHhhccc
Confidence            121111        1222345677899999999999999999998876554

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=100.00  E-value=9.5e-34  Score=288.16  Aligned_cols=252  Identities=23%  Similarity=0.353  Sum_probs=198.6

Q ss_pred             CcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC-----chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEE
Q 048419          331 GFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN-----SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLV  405 (653)
Q Consensus       331 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV  405 (653)
                      +|...+.||+|+||.||++.....+..+++|.++..     .......+..|+.++++++||||+++++++.+.+..++|
T Consensus         1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   80 (260)
T cd08222           1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII   80 (260)
T ss_pred             CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence            477789999999999999998776666777766432     222344567899999999999999999999999999999


Q ss_pred             EeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccc
Q 048419          406 YDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIY  485 (653)
Q Consensus       406 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~  485 (653)
                      +||+++++|.+++...... ...+++.+++.++.|++.||.|||+   .+++|+||+|+||+++. +.+||+|||++...
T Consensus        81 ~e~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~  155 (260)
T cd08222          81 TEYCEGRDLDCKLEELKHT-GKTLSENQVCEWFIQLLLGVHYMHQ---RRILHRDLKAKNIFLKN-NLLKIGDFGVSRLL  155 (260)
T ss_pred             EEeCCCCCHHHHHHHHhhc-ccccCHHHHHHHHHHHHHHHHHHHH---cCccccCCChhheEeec-CCEeecccCceeec
Confidence            9999999999988653211 3468999999999999999999999   89999999999999975 56999999998765


Q ss_pred             cCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhh
Q 048419          486 EHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAID  565 (653)
Q Consensus       486 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d  565 (653)
                      .... .......|+..|+|||.+.+..++.++|+||||+++|+|++|+.|+........      ..... .+       
T Consensus       156 ~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~------~~~~~-~~-------  220 (260)
T cd08222         156 MGSC-DLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSV------VLRIV-EG-------  220 (260)
T ss_pred             CCCc-ccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHH------HHHHH-cC-------
Confidence            4322 122234578899999999888889999999999999999999999964332110      00000 01       


Q ss_pred             hccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 048419          566 QTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEF  603 (653)
Q Consensus       566 ~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  603 (653)
                       .....+......+.+++.+||+.+|++||++.|++++
T Consensus       221 -~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  257 (260)
T cd08222         221 -PTPSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILRN  257 (260)
T ss_pred             -CCCCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhhC
Confidence             1111222345678899999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=100.00  E-value=1.3e-34  Score=308.97  Aligned_cols=202  Identities=33%  Similarity=0.474  Sum_probs=176.2

Q ss_pred             CcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC-chhhHHHHHHHHHHHhhcCCCceeeeeeeecccc------eeEEE
Q 048419          333 GEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN-SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQD------ELLLV  405 (653)
Q Consensus       333 ~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~------~~~lV  405 (653)
                      ...+.||+|+||.||+|+++.+|+.||||.++.. .....+....|+++|++|+|+|||++++.-++..      ...+|
T Consensus        16 ~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlv   95 (732)
T KOG4250|consen   16 EMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLV   95 (732)
T ss_pred             eehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceEE
Confidence            3457899999999999999999999999999764 3445667889999999999999999998765543      57899


Q ss_pred             EeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEE--cC--CCcEEEEeecC
Q 048419          406 YDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILL--DT--YLNAKLGDFGL  481 (653)
Q Consensus       406 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll--~~--~~~~kl~DfGl  481 (653)
                      ||||++|||...|.+...  ...|++.+.+.++.+++.||.|||+   ++|+||||||.||++  .+  .-.-||+|||.
T Consensus        96 mEyC~gGsL~~~L~~PEN--~~GLpE~e~l~lL~d~~~al~~LrE---n~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~  170 (732)
T KOG4250|consen   96 MEYCSGGSLRKVLNSPEN--AYGLPESEFLDLLSDLVSALRHLRE---NGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGA  170 (732)
T ss_pred             EeecCCCcHHHHhcCccc--ccCCCHHHHHHHHHHHHHHHHHHHH---cCceeccCCCCcEEEeecCCCceEEeeecccc
Confidence            999999999999977543  5679999999999999999999999   999999999999999  33  33479999999


Q ss_pred             cccccCCCCCcccccccCCcccCccccc-cCCCCCccceeehHHHHHHHHhCCCCCChhhh
Q 048419          482 AKIYEHGANPQTTHIVGTLGYLAPELTR-TGKATTSTDVYSYGILMLEVACGRRSIEPQKA  541 (653)
Q Consensus       482 a~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~  541 (653)
                      |+.++.+.  .....+||..|++||.+. .+.|+...|.|||||++||.+||..||.....
T Consensus       171 Arel~d~s--~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~  229 (732)
T KOG4250|consen  171 ARELDDNS--LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGG  229 (732)
T ss_pred             cccCCCCC--eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCC
Confidence            99876543  667789999999999998 48899999999999999999999999987554

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2e-34  Score=280.60  Aligned_cols=249  Identities=25%  Similarity=0.309  Sum_probs=205.7

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC---chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN---SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVY  406 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  406 (653)
                      ++|...++||+|.||+|-+++-+.+++.+|+|++++.   .++....-+.|-+.|+..+||.+..+.-.+...+++|+||
T Consensus       168 ~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFVM  247 (516)
T KOG0690|consen  168 EDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFVM  247 (516)
T ss_pred             chhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEEE
Confidence            5688899999999999999999999999999999765   4455566778999999999999999999999999999999


Q ss_pred             eccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccccc
Q 048419          407 DYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE  486 (653)
Q Consensus       407 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~  486 (653)
                      ||..||.|.-+|...     ..+++...+-....|..||.|||+   ++||.||||.+|.|||.+|++||+|||+++.--
T Consensus       248 eyanGGeLf~HLsre-----r~FsE~RtRFYGaEIvsAL~YLHs---~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I  319 (516)
T KOG0690|consen  248 EYANGGELFFHLSRE-----RVFSEDRTRFYGAEIVSALGYLHS---RNIVYRDLKLENLLLDKDGHIKITDFGLCKEEI  319 (516)
T ss_pred             EEccCceEeeehhhh-----hcccchhhhhhhHHHHHHhhhhhh---CCeeeeechhhhheeccCCceEeeecccchhcc
Confidence            999999999998663     347887778889999999999999   999999999999999999999999999998432


Q ss_pred             CCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhh
Q 048419          487 HGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQ  566 (653)
Q Consensus       487 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  566 (653)
                       .....+...+||+.|+|||++....|..+.|-|.+||++|||+||+.||...+...-..++   .    .   .+    
T Consensus       320 -~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLI---l----~---ed----  384 (516)
T KOG0690|consen  320 -KYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELI---L----M---ED----  384 (516)
T ss_pred             -cccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHHH---H----h---hh----
Confidence             2233456689999999999999999999999999999999999999999876543211110   0    0   00    


Q ss_pred             ccCcCCHHHHHHHHHHHHHcCCCCCCCCC-----CHHHHHHH
Q 048419          567 TLDYYDLAEAELVLNLGLFCSAPNPVYRP-----DMRRVVEF  603 (653)
Q Consensus       567 ~l~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~  603 (653)
                        -.++.....+...|....|..||.+|.     .++||.++
T Consensus       385 --~kFPr~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h  424 (516)
T KOG0690|consen  385 --LKFPRTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRH  424 (516)
T ss_pred             --ccCCccCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhh
Confidence              012222345677788889999999995     57777764

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=5.2e-34  Score=300.78  Aligned_cols=249  Identities=25%  Similarity=0.340  Sum_probs=210.4

Q ss_pred             hcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc--hhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEE
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS--QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVY  406 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  406 (653)
                      ...|.+.+.||+|.|+.|.++++..++..||||.+.+..  ....+.+.+|+++|+.|+|||||+++.+......+|+||
T Consensus        55 vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV~  134 (596)
T KOG0586|consen   55 VGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLVM  134 (596)
T ss_pred             ccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEEE
Confidence            456888999999999999999999999999999998763  334466889999999999999999999999999999999


Q ss_pred             eccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccccc
Q 048419          407 DYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE  486 (653)
Q Consensus       407 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~  486 (653)
                      ||+.+|.+.++|...+.     ..+.....++.|+.+|++|||+   +.|+|||||++||||+.+.++||+|||++..+.
T Consensus       135 eya~~ge~~~yl~~~gr-----~~e~~ar~~F~q~vsaveYcH~---k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~  206 (596)
T KOG0586|consen  135 EYASGGELFDYLVKHGR-----MKEKEARAKFRQIVSAVEYCHS---KNIVHRDLKAENILLDENMNIKIADFGFSTFFD  206 (596)
T ss_pred             EeccCchhHHHHHhccc-----chhhhhhhhhHHHHHHHHHHhh---cceeccccchhhcccccccceeeeccccceeec
Confidence            99999999999988754     5557888999999999999999   999999999999999999999999999999876


Q ss_pred             CCCCCcccccccCCcccCccccccCCC-CCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhh
Q 048419          487 HGANPQTTHIVGTLGYLAPELTRTGKA-TTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAID  565 (653)
Q Consensus       487 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d  565 (653)
                      ..  ......+|++.|.|||++.+.++ .+++|+||+|++||.|++|..||++..-.+                   +-+
T Consensus       207 ~~--~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~-------------------Lr~  265 (596)
T KOG0586|consen  207 YG--LMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKE-------------------LRP  265 (596)
T ss_pred             cc--ccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCccccc-------------------ccc
Confidence            43  34456799999999999998876 569999999999999999999998654211                   001


Q ss_pred             hcc-CcC--CHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          566 QTL-DYY--DLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       566 ~~l-~~~--~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                      +.+ +.+  +.....++.+++.+++-.+|.+|+++.++.+.-+.
T Consensus       266 rvl~gk~rIp~~ms~dce~lLrk~lvl~Pskr~~~dqim~~~W~  309 (596)
T KOG0586|consen  266 RVLRGKYRIPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMKDRWR  309 (596)
T ss_pred             hheeeeecccceeechhHHHHHHhhccCccccCCHHHhhhhccc
Confidence            111 111  11123557788999999999999999999986654

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=100.00  E-value=4.4e-34  Score=303.20  Aligned_cols=265  Identities=23%  Similarity=0.302  Sum_probs=202.4

Q ss_pred             HhhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC--chhhHHHHHHHHHHHhhcCCCceeeeeeeecccce---
Q 048419          327 SVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDE---  401 (653)
Q Consensus       327 ~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~---  401 (653)
                      .+.++|...+.||+|++|.||+|+...++..||||++...  .....+.+.+|+.++++++|+|++++++++...+.   
T Consensus        12 ~~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~   91 (343)
T cd07851          12 EVPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLED   91 (343)
T ss_pred             cccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccc
Confidence            4567899999999999999999999988999999998643  23344667889999999999999999998766554   


Q ss_pred             ---eEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEe
Q 048419          402 ---LLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGD  478 (653)
Q Consensus       402 ---~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D  478 (653)
                         .++|+||+ +++|.+++..      ..+++.+++.++.|+++||.|||+   .+|+|+||||+||++++++.+||+|
T Consensus        92 ~~~~~lv~e~~-~~~L~~~~~~------~~l~~~~~~~~~~ql~~aL~~LH~---~gi~H~dlkp~Nill~~~~~~kL~d  161 (343)
T cd07851          92 FQDVYLVTHLM-GADLNNIVKC------QKLSDDHIQFLVYQILRGLKYIHS---AGIIHRDLKPSNIAVNEDCELKILD  161 (343)
T ss_pred             cccEEEEEecC-CCCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCCEEEcc
Confidence               89999999 6699988864      248999999999999999999999   8999999999999999999999999


Q ss_pred             ecCcccccCCCCCcccccccCCcccCcccccc-CCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHH-HHHH-----
Q 048419          479 FGLAKIYEHGANPQTTHIVGTLGYLAPELTRT-GKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLL-VDWV-----  551 (653)
Q Consensus       479 fGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l-~~~~-----  551 (653)
                      ||++......    .....++..|+|||.+.+ ..++.++|||||||++|||++|+.||........... .+..     
T Consensus       162 fg~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~  237 (343)
T cd07851         162 FGLARHTDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDE  237 (343)
T ss_pred             cccccccccc----ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCH
Confidence            9999865432    233467889999998865 3678899999999999999999999975443221110 0000     


Q ss_pred             --HhhhcccchhHhhhhcc--CcCC-----HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          552 --KELHLEGEITQAIDQTL--DYYD-----LAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       552 --~~~~~~~~~~~~~d~~l--~~~~-----~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                        ............+....  ....     ......+.+++.+||+.+|.+|||+.||+++-.
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h~~  300 (343)
T cd07851         238 ELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHPY  300 (343)
T ss_pred             HHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcCCC
Confidence              00000000000111000  0000     112467899999999999999999999998653

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=100.00  E-value=2.3e-33  Score=297.68  Aligned_cols=264  Identities=23%  Similarity=0.302  Sum_probs=201.2

Q ss_pred             HHHhhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC--chhhHHHHHHHHHHHhhcCCCceeeeeeeecccc--
Q 048419          325 LASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQD--  400 (653)
Q Consensus       325 l~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~--  400 (653)
                      +....++|...+.||+|+||.||++....++..||||++...  .....+.+.+|+.++++++|+||+++++++....  
T Consensus        10 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   89 (343)
T cd07880          10 IWEVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSL   89 (343)
T ss_pred             hhccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccc
Confidence            445678899999999999999999999888999999998543  2333456889999999999999999999886553  


Q ss_pred             ----eeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEE
Q 048419          401 ----ELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKL  476 (653)
Q Consensus       401 ----~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl  476 (653)
                          ..++||||+ +++|.+++..      ..+++..++.++.|++.||+|||+   .+|+||||||+||+++.++.+||
T Consensus        90 ~~~~~~~lv~e~~-~~~l~~~~~~------~~l~~~~~~~i~~qi~~al~~LH~---~gi~H~dlkp~Nill~~~~~~kl  159 (343)
T cd07880          90 DRFHDFYLVMPFM-GTDLGKLMKH------EKLSEDRIQFLVYQMLKGLKYIHA---AGIIHRDLKPGNLAVNEDCELKI  159 (343)
T ss_pred             cccceEEEEEecC-CCCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEE
Confidence                458999999 7789888753      248899999999999999999999   89999999999999999999999


Q ss_pred             EeecCcccccCCCCCcccccccCCcccCcccccc-CCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHh--
Q 048419          477 GDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRT-GKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKE--  553 (653)
Q Consensus       477 ~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~--  553 (653)
                      +|||++......    .....+++.|+|||.+.+ ..++.++|+||||+++++|++|+.||........  +......  
T Consensus       160 ~dfg~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~--~~~~~~~~~  233 (343)
T cd07880         160 LDFGLARQTDSE----MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQ--LMEIMKVTG  233 (343)
T ss_pred             eecccccccccC----ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHHhcC
Confidence            999999865332    223457889999998875 4588899999999999999999999975543211  1110000  


Q ss_pred             --------hhcccchhHhhhhc--cC-----cCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          554 --------LHLEGEITQAIDQT--LD-----YYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       554 --------~~~~~~~~~~~d~~--l~-----~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                              ..............  ..     .........+.+++.+|++.||.+|||+.+++++-
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~  299 (343)
T cd07880         234 TPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHP  299 (343)
T ss_pred             CCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCc
Confidence                    00000000000000  00     00012235688999999999999999999999644

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=100.00  E-value=2.8e-34  Score=278.43  Aligned_cols=284  Identities=25%  Similarity=0.343  Sum_probs=210.4

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCC----cEEEEEEeccCch--hhHHHHHHHHHHHhhcCCCceeeeeeeecc-ccee
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLG----LEVAIKRIGHNSQ--QGMKEFVAEIMSMGRLRHRNLVQLHGWCRK-QDEL  402 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~----~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~-~~~~  402 (653)
                      ..|+....||+|.+|.||||....++    +.+|||+++....  .-.....+|+.+++.|+|+|++.+..++.+ +...
T Consensus        24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v  103 (438)
T KOG0666|consen   24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKV  103 (438)
T ss_pred             HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceE
Confidence            35777889999999999999655433    3789999965422  123456789999999999999999999988 6789


Q ss_pred             EEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCC----CcEEEEe
Q 048419          403 LLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTY----LNAKLGD  478 (653)
Q Consensus       403 ~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~----~~~kl~D  478 (653)
                      ++++||.+. +|...++-+.....+.++-.....|+.||+.|+.|||+   +=|+||||||.|||+..+    |.+||+|
T Consensus       104 ~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~---NWvlHRDLKPaNIlvmgdgperG~VKIaD  179 (438)
T KOG0666|consen  104 WLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHS---NWVLHRDLKPANILVMGDGPERGRVKIAD  179 (438)
T ss_pred             EEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhh---hheeeccCCcceEEEeccCCccCeeEeec
Confidence            999999976 89998887665556778989999999999999999999   779999999999999776    9999999


Q ss_pred             ecCcccccCCCCC--cccccccCCcccCccccccC-CCCCccceeehHHHHHHHHhCCCCCChhhhhhH------HHHHH
Q 048419          479 FGLAKIYEHGANP--QTTHIVGTLGYLAPELTRTG-KATTSTDVYSYGILMLEVACGRRSIEPQKAAAE------LLLVD  549 (653)
Q Consensus       479 fGla~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~-~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~------~~l~~  549 (653)
                      ||+++.+...-.+  ....++-|+.|+|||.+.+. .||.+.|||+.||++.||+|..+.|.+......      ..-.+
T Consensus       180 lGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~  259 (438)
T KOG0666|consen  180 LGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLD  259 (438)
T ss_pred             ccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHH
Confidence            9999988665333  23456779999999998775 589999999999999999999887765432211      01111


Q ss_pred             HHHhhh---cccchhH----------hhhhccCcCCH---H--------HHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          550 WVKELH---LEGEITQ----------AIDQTLDYYDL---A--------EAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       550 ~~~~~~---~~~~~~~----------~~d~~l~~~~~---~--------~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                      .+....   .+.+...          +-+-+...++.   .        ......+|..++|..||.+|.|+.+.+++.-
T Consensus       260 rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~y  339 (438)
T KOG0666|consen  260 RIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHPY  339 (438)
T ss_pred             HHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhcccc
Confidence            111110   0000000          00001000100   0        1133789999999999999999999999886


Q ss_pred             C-CCCCCCCCCcc
Q 048419          606 G-DSSLPPLPPDI  617 (653)
Q Consensus       606 ~-~~~~p~~p~~~  617 (653)
                      . +.++|+.|-..
T Consensus       340 F~~d~lpp~pt~~  352 (438)
T KOG0666|consen  340 FTEDPLPPLPTSD  352 (438)
T ss_pred             cccCCCCCCcccc
Confidence            4 45577666544

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=100.00  E-value=2e-33  Score=288.98  Aligned_cols=262  Identities=26%  Similarity=0.350  Sum_probs=201.9

Q ss_pred             cCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc--hhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEecc
Q 048419          332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS--QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYV  409 (653)
Q Consensus       332 f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~  409 (653)
                      |+..+.||+|++|.||+|+...+++.+|+|.+....  ....+.+..|+..+++++|+|++++++++.+.+..++|+||+
T Consensus         1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~   80 (282)
T cd07829           1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC   80 (282)
T ss_pred             CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence            455678999999999999999889999999997653  334567889999999999999999999999999999999999


Q ss_pred             CCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCC
Q 048419          410 PNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGA  489 (653)
Q Consensus       410 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~  489 (653)
                      + ++|.+++....    ..+++.++++++.|++.||.|||+   ++++|+||+|+||++++++.+||+|||+++......
T Consensus        81 ~-~~l~~~i~~~~----~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~  152 (282)
T cd07829          81 D-MDLKKYLDKRP----GPLSPNLIKSIMYQLLRGLAYCHS---HRILHRDLKPQNILINRDGVLKLADFGLARAFGIPL  152 (282)
T ss_pred             C-cCHHHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChheEEEcCCCCEEEecCCcccccCCCc
Confidence            7 58999997652    348999999999999999999999   899999999999999999999999999998654322


Q ss_pred             CCcccccccCCcccCccccccC-CCCCccceeehHHHHHHHHhCCCCCChhhhhhHHH-HHHHHHhhhcccchhHh----
Q 048419          490 NPQTTHIVGTLGYLAPELTRTG-KATTSTDVYSYGILMLEVACGRRSIEPQKAAAELL-LVDWVKELHLEGEITQA----  563 (653)
Q Consensus       490 ~~~~~~~~gt~~y~aPE~~~~~-~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~-l~~~~~~~~~~~~~~~~----  563 (653)
                      . ......++..|+|||.+.+. .++.++|||||||+++||++|+.||.......... +...... .........    
T Consensus       153 ~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  230 (282)
T cd07829         153 R-TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGT-PTEESWPGVTKLP  230 (282)
T ss_pred             c-ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCC-CcHHHHHhhcccc
Confidence            1 22223457789999998776 78999999999999999999999997654322111 0000000 000000000    


Q ss_pred             -hhhccCcC--------CHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 048419          564 -IDQTLDYY--------DLAEAELVLNLGLFCSAPNPVYRPDMRRVVEF  603 (653)
Q Consensus       564 -~d~~l~~~--------~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  603 (653)
                       .+.....+        .......+.+++..||+.+|++||++.+++.+
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~  279 (282)
T cd07829         231 DYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKH  279 (282)
T ss_pred             cccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhC
Confidence             00001000        00124679999999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=100.00  E-value=1.3e-35  Score=282.18  Aligned_cols=263  Identities=26%  Similarity=0.334  Sum_probs=204.1

Q ss_pred             cccCHHHHHHhhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCch-hhHHHHHHHHHHHhhc-CCCceeeeeee
Q 048419          318 RRFKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQ-QGMKEFVAEIMSMGRL-RHRNLVQLHGW  395 (653)
Q Consensus       318 ~~f~~~el~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~H~niv~l~g~  395 (653)
                      ..|+-++|+.       ...||.|+||+|+|-.++..|+..|||+++.... .+.++++.|.+...+- ++||||+++|.
T Consensus        59 ~~F~~~~Lqd-------lg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa  131 (361)
T KOG1006|consen   59 HTFTSDNLQD-------LGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGA  131 (361)
T ss_pred             cccccchHHH-------HHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhh
Confidence            4466555554       4579999999999999999999999999986643 5667888898866555 79999999999


Q ss_pred             ecccceeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEE
Q 048419          396 CRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAK  475 (653)
Q Consensus       396 ~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~k  475 (653)
                      +..++.+|+.||.| ..||+.+-.......+..+++...-.|.....+||.||-+.  ..|||||+||+||||+..|.+|
T Consensus       132 ~F~EGdcWiCMELM-d~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~--lkiIHRDvKPSNILldr~G~vK  208 (361)
T KOG1006|consen  132 LFSEGDCWICMELM-DISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEE--LKIIHRDVKPSNILLDRHGDVK  208 (361)
T ss_pred             hhcCCceeeeHHHH-hhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHH--hhhhhccCChhheEEecCCCEe
Confidence            99999999999999 45776655443333356688888888999999999999985  7899999999999999999999


Q ss_pred             EEeecCcccccCCCCCcccccccCCcccCccccccC--CCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHh
Q 048419          476 LGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTG--KATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKE  553 (653)
Q Consensus       476 l~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~  553 (653)
                      |||||++..+..+.  ..+.-+|...|||||.+...  .|+-+|||||||++|+|+.||+.|+..-+..-     +.+..
T Consensus       209 LCDFGIcGqLv~Si--AkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svf-----eql~~  281 (361)
T KOG1006|consen  209 LCDFGICGQLVDSI--AKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVF-----EQLCQ  281 (361)
T ss_pred             eecccchHhHHHHH--HhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHH-----HHHHH
Confidence            99999998664432  22344788899999988533  48889999999999999999999998654311     11110


Q ss_pred             hhcccchhHhhhhcc--CcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 048419          554 LHLEGEITQAIDQTL--DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEF  603 (653)
Q Consensus       554 ~~~~~~~~~~~d~~l--~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  603 (653)
                      . ..+..     +.|  ..........+...+..|+-.|...||...++.++
T Consensus       282 V-v~gdp-----p~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~  327 (361)
T KOG1006|consen  282 V-VIGDP-----PILLFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKF  327 (361)
T ss_pred             H-HcCCC-----CeecCcccccccCHHHHHHHHHHhhcccccCcchhhhhcC
Confidence            0 01111     112  11223356778999999999999999999998864

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=5.1e-34  Score=277.37  Aligned_cols=264  Identities=21%  Similarity=0.312  Sum_probs=210.6

Q ss_pred             CHHHHHHhhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcC-CCceeeeeeeeccc
Q 048419          321 KYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLR-HRNLVQLHGWCRKQ  399 (653)
Q Consensus       321 ~~~el~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~  399 (653)
                      ++.|+-+.|     .+.||+|+++.|-.++...+|.++|||++.+..........+|++++.+.+ |+||++|++||+++
T Consensus        74 ~F~d~YkLt-----~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd  148 (463)
T KOG0607|consen   74 KFEDMYKLT-----SELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDD  148 (463)
T ss_pred             hHHHHHHhH-----HHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhccc
Confidence            456777777     467999999999999988899999999998887777888999999999995 99999999999999


Q ss_pred             ceeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCC---cEEE
Q 048419          400 DELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYL---NAKL  476 (653)
Q Consensus       400 ~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~---~~kl  476 (653)
                      ..+|||||-|.||+|..+|.++     +.+++.+..++.++|+.||.|||.   ++|.||||||+|||-....   -+||
T Consensus       149 ~~FYLVfEKm~GGplLshI~~~-----~~F~E~EAs~vvkdia~aLdFlH~---kgIAHRDlKPENiLC~~pn~vsPvKi  220 (463)
T KOG0607|consen  149 TRFYLVFEKMRGGPLLSHIQKR-----KHFNEREASRVVKDIASALDFLHT---KGIAHRDLKPENILCESPNKVSPVKI  220 (463)
T ss_pred             ceEEEEEecccCchHHHHHHHh-----hhccHHHHHHHHHHHHHHHHHHhh---cCcccccCCccceeecCCCCcCceee
Confidence            9999999999999999999875     458999999999999999999999   9999999999999995443   3899


Q ss_pred             EeecCcccccC------CCCCcccccccCCcccCccccc-----cCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHH
Q 048419          477 GDFGLAKIYEH------GANPQTTHIVGTLGYLAPELTR-----TGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAEL  545 (653)
Q Consensus       477 ~DfGla~~~~~------~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~  545 (653)
                      |||.|..-+..      ...+.....+|+..|||||+..     ...|+.+.|.|||||+||-|++|..||.+.-..+. 
T Consensus       221 CDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dC-  299 (463)
T KOG0607|consen  221 CDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADC-  299 (463)
T ss_pred             eccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcC-
Confidence            99988764322      1223445568899999999763     23588999999999999999999999986533211 


Q ss_pred             HHHHHHHhhhcccchhHhhhhcc------C--cCCHH----HHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          546 LLVDWVKELHLEGEITQAIDQTL------D--YYDLA----EAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       546 ~l~~~~~~~~~~~~~~~~~d~~l------~--~~~~~----~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                              -|..|+..+.....|      +  +++..    ...+..+++...+..++.+|-++.+++.+-..
T Consensus       300 --------GWdrGe~Cr~CQ~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnhPw~  364 (463)
T KOG0607|consen  300 --------GWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNHPWV  364 (463)
T ss_pred             --------CccCCCccHHHHHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCCccc
Confidence                    112222222211111      1  22322    24667888899999999999999999985543

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=100.00  E-value=3.9e-33  Score=281.57  Aligned_cols=237  Identities=26%  Similarity=0.352  Sum_probs=195.0

Q ss_pred             eeeeCcEEEEEEEeCCCCcEEEEEEeccCc---hhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEeccCCCCc
Q 048419          338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNS---QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSL  414 (653)
Q Consensus       338 LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL  414 (653)
                      ||+|+||.||++....+++.+|+|.+....   ......+..|+.++++++|+|++++++.+...+..++||||+++++|
T Consensus         1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L   80 (250)
T cd05123           1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL   80 (250)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence            699999999999998889999999986542   23456889999999999999999999999999999999999999999


Q ss_pred             hhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCCCCccc
Q 048419          415 DKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTT  494 (653)
Q Consensus       415 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~  494 (653)
                      .+++....     .+++..+..++.|+++||.|||+   .+++|+||+|+||+++.++.++|+|||++....... ....
T Consensus        81 ~~~l~~~~-----~l~~~~~~~~~~qi~~~l~~lh~---~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~-~~~~  151 (250)
T cd05123          81 FSHLSKEG-----RFSEERARFYAAEIVLALEYLHS---LGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEG-SRTN  151 (250)
T ss_pred             HHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCcceEEEcCCCcEEEeecCcceecccCC-Cccc
Confidence            99997542     48899999999999999999999   999999999999999999999999999998654332 2233


Q ss_pred             ccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhccCcCCHH
Q 048419          495 HIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYYDLA  574 (653)
Q Consensus       495 ~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~  574 (653)
                      ...++..|++||...+...+.++|+||||+++|||++|+.||...+...   ....+..    .        .+ ..+..
T Consensus       152 ~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~---~~~~~~~----~--------~~-~~~~~  215 (250)
T cd05123         152 TFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKE---IYEKILK----D--------PL-RFPEF  215 (250)
T ss_pred             CCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHH---HHHHHhc----C--------CC-CCCCC
Confidence            4567889999999988888999999999999999999999997544311   1111111    0        00 11111


Q ss_pred             HHHHHHHHHHHcCCCCCCCCCCHHH
Q 048419          575 EAELVLNLGLFCSAPNPVYRPDMRR  599 (653)
Q Consensus       575 ~~~~l~~l~~~Cl~~dP~~RPs~~e  599 (653)
                      ....+.+++.+||..||++||++.+
T Consensus       216 ~~~~l~~~i~~~l~~~p~~R~~~~~  240 (250)
T cd05123         216 LSPEARDLISGLLQKDPTKRLGSGG  240 (250)
T ss_pred             CCHHHHHHHHHHhcCCHhhCCCccc
Confidence            2466789999999999999999943

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=100.00  E-value=7.1e-34  Score=274.48  Aligned_cols=278  Identities=21%  Similarity=0.277  Sum_probs=214.2

Q ss_pred             hhcCcCcc-eeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhc-CCCceeeeeeeecc----cce
Q 048419          328 VTKGFGEQ-NLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRL-RHRNLVQLHGWCRK----QDE  401 (653)
Q Consensus       328 at~~f~~~-~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~----~~~  401 (653)
                      +|++|.+. ++||-|-.|.|-.+.++.+++.+|+|++...     ....+|+++--.. .|+|||.+++.+..    ...
T Consensus        59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds-----~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkc  133 (400)
T KOG0604|consen   59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS-----PKARREVELHWMASGHPHIVSIIDVYENSYQGRKC  133 (400)
T ss_pred             chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC-----HHHHhHhhhhhhhcCCCceEEeehhhhhhccCcee
Confidence            44555443 5799999999999999999999999998433     3445778765555 69999999998754    346


Q ss_pred             eEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEc---CCCcEEEEe
Q 048419          402 LLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLD---TYLNAKLGD  478 (653)
Q Consensus       402 ~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~---~~~~~kl~D  478 (653)
                      +.+|||.|+||.|.+.+.+++   ...+++++.-+|..||+.|+.|||+   .+|.||||||+|+|..   .|-.+||+|
T Consensus       134 LLiVmE~meGGeLfsriq~~g---~~afTErea~eI~~qI~~Av~~lH~---~nIAHRDlKpENLLyt~t~~na~lKLtD  207 (400)
T KOG0604|consen  134 LLIVMECMEGGELFSRIQDRG---DQAFTEREASEIMKQIGLAVRYLHS---MNIAHRDLKPENLLYTTTSPNAPLKLTD  207 (400)
T ss_pred             eEeeeecccchHHHHHHHHcc---cccchHHHHHHHHHHHHHHHHHHHh---cchhhccCChhheeeecCCCCcceEecc
Confidence            789999999999999998876   4679999999999999999999999   9999999999999995   455699999


Q ss_pred             ecCcccccCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhccc
Q 048419          479 FGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEG  558 (653)
Q Consensus       479 fGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~  558 (653)
                      ||+|+....  .......+.|+.|.|||++...+|+...|+||+||++|-|+||.+||.......   +         ..
T Consensus       208 fGFAK~t~~--~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~a---i---------sp  273 (400)
T KOG0604|consen  208 FGFAKETQE--PGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA---I---------SP  273 (400)
T ss_pred             cccccccCC--CccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCcc---C---------Ch
Confidence            999996543  234455688999999999999999999999999999999999999998654310   0         11


Q ss_pred             chhHhhhhccCcCCH----HHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH--cCCCCCCCCCCccccccccccCCcCC
Q 048419          559 EITQAIDQTLDYYDL----AEAELVLNLGLFCSAPNPVYRPDMRRVVEFL--LGDSSLPPLPPDIHLKDTRNIMGFSD  630 (653)
Q Consensus       559 ~~~~~~d~~l~~~~~----~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L--~~~~~~p~~p~~~~~~~~~~~~~~~~  630 (653)
                      .+..-+....-.++.    ..++...+++...|..+|.+|-|+.|++.+-  .+...+|..|+.....-......|++
T Consensus       274 gMk~rI~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~~~~vp~tpl~t~~~l~~a~e~w~d  351 (400)
T KOG0604|consen  274 GMKRRIRTGQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWINQYEAVPQTPLSTSRMLKEAVEAWDD  351 (400)
T ss_pred             hHHhHhhccCccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcCchhcccccCCCCCchhhhhcchhhhhhHH
Confidence            111111111112222    2357788999999999999999999999865  45667787776544333333333433

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=100.00  E-value=5.2e-33  Score=293.64  Aligned_cols=263  Identities=23%  Similarity=0.275  Sum_probs=195.1

Q ss_pred             CcCcceeeeeeCcEEEEEEEeCCC--CcEEEEEEeccC--chhhHHHHHHHHHHHhhc-CCCceeeeeeeeccc----ce
Q 048419          331 GFGEQNLVGSGGFGRVYRGLMPSL--GLEVAIKRIGHN--SQQGMKEFVAEIMSMGRL-RHRNLVQLHGWCRKQ----DE  401 (653)
Q Consensus       331 ~f~~~~~LG~G~fg~Vy~~~~~~~--~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~----~~  401 (653)
                      +|...+.||+|+||.||++.....  +..||+|++...  .....+.+.+|+++++++ +|+||+++++.+...    ..
T Consensus         1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~   80 (332)
T cd07857           1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE   80 (332)
T ss_pred             CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence            477789999999999999999877  889999998643  223356788899999999 599999999875432    45


Q ss_pred             eEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecC
Q 048419          402 LLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGL  481 (653)
Q Consensus       402 ~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl  481 (653)
                      .++++||+. ++|.+++...     ..+++..++.++.||+.||.|||+   .+++||||||+|||++.++.+||+|||+
T Consensus        81 ~~~~~e~~~-~~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~---~givH~dlkp~Nili~~~~~~kl~Dfg~  151 (332)
T cd07857          81 LYLYEELME-ADLHQIIRSG-----QPLTDAHFQSFIYQILCGLKYIHS---ANVLHRDLKPGNLLVNADCELKICDFGL  151 (332)
T ss_pred             EEEEEeccc-CCHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHeEEcCCCCEEeCcCCC
Confidence            788999985 6898888543     348899999999999999999999   8999999999999999999999999999


Q ss_pred             cccccCCCC---CcccccccCCcccCcccccc-CCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhh--
Q 048419          482 AKIYEHGAN---PQTTHIVGTLGYLAPELTRT-GKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELH--  555 (653)
Q Consensus       482 a~~~~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~--  555 (653)
                      ++.......   .......|+..|+|||.+.+ ..++.++||||+||++|+|++|+.||........  +...+....  
T Consensus       152 a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~--~~~~~~~~~~~  229 (332)
T cd07857         152 ARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQ--LNQILQVLGTP  229 (332)
T ss_pred             ceecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHH--HHHHHHHhCCC
Confidence            986543221   11223468899999998765 4688999999999999999999999875442211  100000000  


Q ss_pred             --------cccchhHhhhh-------ccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          556 --------LEGEITQAIDQ-------TLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       556 --------~~~~~~~~~d~-------~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                              ...........       .+..........+.+++.+|++.||.+|||+.+++++=
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~  293 (332)
T cd07857         230 DEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHP  293 (332)
T ss_pred             CHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcCh
Confidence                    00000000000       00000011245788999999999999999999998643

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=3.3e-33  Score=315.27  Aligned_cols=260  Identities=27%  Similarity=0.421  Sum_probs=207.6

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCC-------CCcEEEEEEeccC-chhhHHHHHHHHHHHhhc-CCCceeeeeeeecccc
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPS-------LGLEVAIKRIGHN-SQQGMKEFVAEIMSMGRL-RHRNLVQLHGWCRKQD  400 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~-------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~  400 (653)
                      ++....+.||+|.||.|++|....       ....||||.++.. ...+.+.+..|+++|+.+ +|+|++.++|+|.+.+
T Consensus       296 ~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~  375 (609)
T KOG0200|consen  296 ENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDG  375 (609)
T ss_pred             hhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCC
Confidence            344556699999999999998531       1467999999755 335678899999999999 6999999999999999


Q ss_pred             eeEEEEeccCCCCchhhhhccc---------cccc--ccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEc
Q 048419          401 ELLLVYDYVPNGSLDKLLFDKD---------HKLR--KLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLD  469 (653)
Q Consensus       401 ~~~lV~E~~~~gsL~~~l~~~~---------~~~~--~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~  469 (653)
                      ..++|.||+..|+|.++|....         ....  ..|+..+.+.++.|||.|++||++   .+++||||.++|||+.
T Consensus       376 ~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~---~~~vHRDLAaRNVLi~  452 (609)
T KOG0200|consen  376 PLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLAS---VPCVHRDLAARNVLIT  452 (609)
T ss_pred             ceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhh---CCccchhhhhhhEEec
Confidence            9999999999999999998865         1111  238999999999999999999999   8999999999999999


Q ss_pred             CCCcEEEEeecCcccccCCCCCccccccc--CCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHH
Q 048419          470 TYLNAKLGDFGLAKIYEHGANPQTTHIVG--TLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELL  546 (653)
Q Consensus       470 ~~~~~kl~DfGla~~~~~~~~~~~~~~~g--t~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~  546 (653)
                      .+..+||+|||+++..............+  ...|||||.+....++.|+||||||++||||.| |..|+.+.....+  
T Consensus       453 ~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~~--  530 (609)
T KOG0200|consen  453 KNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPTEE--  530 (609)
T ss_pred             CCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCcHHH--
Confidence            99999999999999655544333222222  446999999999999999999999999999999 7778765221111  


Q ss_pred             HHHHHHhhhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          547 LVDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       547 l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                      +.++++.    |...        ..+..+..++.++++.||+.+|++||++.|+.+.++.
T Consensus       531 l~~~l~~----G~r~--------~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~  578 (609)
T KOG0200|consen  531 LLEFLKE----GNRM--------EQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEK  578 (609)
T ss_pred             HHHHHhc----CCCC--------CCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHH
Confidence            1222222    2111        2233346778899999999999999999999999977

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=100.00  E-value=2.8e-32  Score=312.12  Aligned_cols=146  Identities=27%  Similarity=0.394  Sum_probs=132.4

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC---chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN---SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVY  406 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  406 (653)
                      ++|.+.+.||+|+||.||+|.+..+++.||||++...   .....+.+..|+.+++.++|+||+++++++...+.+++||
T Consensus         4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVm   83 (669)
T cd05610           4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVM   83 (669)
T ss_pred             CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEE
Confidence            5788899999999999999999988999999998643   2334567889999999999999999999999999999999


Q ss_pred             eccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcc
Q 048419          407 DYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK  483 (653)
Q Consensus       407 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~  483 (653)
                      ||+++++|.+++...     ..+++..++.++.||+.||.|||.   ++|+||||||+||||+.++.+||+|||+++
T Consensus        84 Ey~~g~~L~~li~~~-----~~l~~~~~~~i~~qil~aL~yLH~---~gIiHrDLKP~NILl~~~g~vkL~DFGls~  152 (669)
T cd05610          84 EYLIGGDVKSLLHIY-----GYFDEEMAVKYISEVALALDYLHR---HGIIHRDLKPDNMLISNEGHIKLTDFGLSK  152 (669)
T ss_pred             eCCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence            999999999998653     247888899999999999999999   899999999999999999999999999986

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=4.4e-33  Score=309.00  Aligned_cols=266  Identities=26%  Similarity=0.295  Sum_probs=216.9

Q ss_pred             CcccCHHHHHHhhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC---chhhHHHHHHHHHHHhhcCCCceeeee
Q 048419          317 ARRFKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN---SQQGMKEFVAEIMSMGRLRHRNLVQLH  393 (653)
Q Consensus       317 ~~~f~~~el~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~  393 (653)
                      +..-...+++--.++|.+.++||+|+||.|..++++.+++.||+|++.+.   ......-|+.|-.+|..-+.+-|++++
T Consensus        62 p~v~~v~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~Lh  141 (1317)
T KOG0612|consen   62 PIVKKVKELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLH  141 (1317)
T ss_pred             HHHHHHHHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHH
Confidence            33445667777778999999999999999999999999999999999763   344556788999999998999999999


Q ss_pred             eeecccceeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCc
Q 048419          394 GWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLN  473 (653)
Q Consensus       394 g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~  473 (653)
                      -.|.+++++|+|||||+||+|..+|....     .++++...-.+..|..||.-||+   .|+|||||||+|||||..|+
T Consensus       142 yAFQD~~~LYlVMdY~pGGDlltLlSk~~-----~~pE~~ArFY~aEiVlAldslH~---mgyVHRDiKPDNvLld~~GH  213 (1317)
T KOG0612|consen  142 YAFQDERYLYLVMDYMPGGDLLTLLSKFD-----RLPEDWARFYTAEIVLALDSLHS---MGYVHRDIKPDNVLLDKSGH  213 (1317)
T ss_pred             HHhcCccceEEEEecccCchHHHHHhhcC-----CChHHHHHHHHHHHHHHHHHHHh---ccceeccCCcceeEecccCc
Confidence            99999999999999999999999997754     48999999999999999999999   99999999999999999999


Q ss_pred             EEEEeecCcccccCCCCCcccccccCCcccCcccccc-----CCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHH
Q 048419          474 AKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRT-----GKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLV  548 (653)
Q Consensus       474 ~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~  548 (653)
                      +||+|||.+-.+..+..-.....+|||.|++||++..     +.|.+.+|-||+||++|||+.|..||....-.+..   
T Consensus       214 ikLADFGsClkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY---  290 (1317)
T KOG0612|consen  214 IKLADFGSCLKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETY---  290 (1317)
T ss_pred             EeeccchhHHhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHH---
Confidence            9999999998877555545556789999999999853     57899999999999999999999999864422111   


Q ss_pred             HHHHhhhcccchhHhhhhccCcCC--HHHHHHHHHHHHHcCCCCCCCCCC---HHHHHHHHc
Q 048419          549 DWVKELHLEGEITQAIDQTLDYYD--LAEAELVLNLGLFCSAPNPVYRPD---MRRVVEFLL  605 (653)
Q Consensus       549 ~~~~~~~~~~~~~~~~d~~l~~~~--~~~~~~l~~l~~~Cl~~dP~~RPs---~~evl~~L~  605 (653)
                               +++..- ...+ .++  .+.++.+.+||.+.+. +|+.|-.   +.++-.+.-
T Consensus       291 ---------~KIm~h-k~~l-~FP~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~HpF  340 (1317)
T KOG0612|consen  291 ---------GKIMNH-KESL-SFPDETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNHPF  340 (1317)
T ss_pred             ---------HHHhch-hhhc-CCCcccccCHHHHHHHHHHhc-ChhhhcccccHHHHHhCcc
Confidence                     011110 0011 111  2345677777777665 7788887   888888764

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=100.00  E-value=6e-33  Score=277.08  Aligned_cols=267  Identities=22%  Similarity=0.291  Sum_probs=211.6

Q ss_pred             hhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcC-C-Cc----eeeeeeeecccce
Q 048419          328 VTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLR-H-RN----LVQLHGWCRKQDE  401 (653)
Q Consensus       328 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H-~n----iv~l~g~~~~~~~  401 (653)
                      .+++|.+..++|+|.||.|-++.+...+..||||+++...+ ..+.-+-|++.+++|. + |+    +|++.+|+.-.++
T Consensus        87 l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~k-YreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrgh  165 (415)
T KOG0671|consen   87 LTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDK-YREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGH  165 (415)
T ss_pred             cccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHH-HhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCc
Confidence            47899999999999999999999999899999999965433 3455667999999994 3 22    7889999999999


Q ss_pred             eEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcC-----------
Q 048419          402 LLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDT-----------  470 (653)
Q Consensus       402 ~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~-----------  470 (653)
                      .|||+|.+ |-|+.++|..+.   -.+++..+++.++.|++++++|||+   .+++|-||||+|||+.+           
T Consensus       166 iCivfell-G~S~~dFlk~N~---y~~fpi~~ir~m~~QL~~sv~fLh~---~kl~HTDLKPENILfvss~~~~~~~~k~  238 (415)
T KOG0671|consen  166 ICIVFELL-GLSTFDFLKENN---YIPFPIDHIRHMGYQLLESVAFLHD---LKLTHTDLKPENILFVSSEYFKTYNPKK  238 (415)
T ss_pred             eEEEEecc-ChhHHHHhccCC---ccccchHHHHHHHHHHHHHHHHHHh---cceeecCCChheEEEeccceEEEeccCC
Confidence            99999998 669999998765   4678899999999999999999999   99999999999999931           


Q ss_pred             ---------CCcEEEEeecCcccccCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhh
Q 048419          471 ---------YLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKA  541 (653)
Q Consensus       471 ---------~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~  541 (653)
                               +..+||+|||.|+.....    ....+.|..|.|||++.+-.++..+||||+||+|.|+.||...|+..++
T Consensus       239 ~~~~~r~~ks~~I~vIDFGsAtf~~e~----hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen  314 (415)
T KOG0671|consen  239 KVCFIRPLKSTAIKVIDFGSATFDHEH----HSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHEN  314 (415)
T ss_pred             ccceeccCCCcceEEEecCCcceeccC----cceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCc
Confidence                     345899999999875332    2446789999999999999999999999999999999999999988776


Q ss_pred             hhHHHHHHHHHhhhcccchhHh-------------------------hhh--cc---CcCCHHHHHHHHHHHHHcCCCCC
Q 048419          542 AAELLLVDWVKELHLEGEITQA-------------------------IDQ--TL---DYYDLAEAELVLNLGLFCSAPNP  591 (653)
Q Consensus       542 ~~~~~l~~~~~~~~~~~~~~~~-------------------------~d~--~l---~~~~~~~~~~l~~l~~~Cl~~dP  591 (653)
                      .+.+.+.+.+........+...                         .+.  .|   ......+..+|.+|+..||..||
T Consensus       315 ~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP  394 (415)
T KOG0671|consen  315 LEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDP  394 (415)
T ss_pred             HHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCc
Confidence            5554433333221111111111                         000  00   01233456789999999999999


Q ss_pred             CCCCCHHHHHHHHcC
Q 048419          592 VYRPDMRRVVEFLLG  606 (653)
Q Consensus       592 ~~RPs~~evl~~L~~  606 (653)
                      .+|+|++|++++--.
T Consensus       395 ~~RiTl~EAL~HpFF  409 (415)
T KOG0671|consen  395 ARRITLREALSHPFF  409 (415)
T ss_pred             cccccHHHHhcCHHh
Confidence            999999999987543

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.98  E-value=4.2e-32  Score=272.50  Aligned_cols=220  Identities=21%  Similarity=0.195  Sum_probs=177.6

Q ss_pred             eCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEeccCCCCchhhhhc
Q 048419          341 GGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFD  420 (653)
Q Consensus       341 G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~  420 (653)
                      |.+|.||++.+..+++.+|+|++....     .+..|...+....|||++++++++.+.+..++||||+++|+|.+++..
T Consensus         4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~   78 (237)
T cd05576           4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK   78 (237)
T ss_pred             cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH
Confidence            889999999999999999999996543     233455555666799999999999999999999999999999999865


Q ss_pred             ccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCCCCcccccccCC
Q 048419          421 KDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTL  500 (653)
Q Consensus       421 ~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~  500 (653)
                      ..     .+++..+..++.|++.||.|||+   ++++||||||+||+++.++.++++|||++......    .....++.
T Consensus        79 ~~-----~l~~~~~~~~~~ql~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~----~~~~~~~~  146 (237)
T cd05576          79 FL-----NIPEECVKRWAAEMVVALDALHR---EGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS----CDGEAVEN  146 (237)
T ss_pred             hc-----CCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHEEEcCCCCEEEecccchhccccc----cccCCcCc
Confidence            42     48899999999999999999999   89999999999999999999999999988655432    12234567


Q ss_pred             cccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhccCcCCHHHHHHHH
Q 048419          501 GYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYYDLAEAELVL  580 (653)
Q Consensus       501 ~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~  580 (653)
                      .|+|||......++.++||||+|+++|||++|+.|+.......           .....        + ..+......+.
T Consensus       147 ~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~-----------~~~~~--------~-~~~~~~~~~~~  206 (237)
T cd05576         147 MYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGI-----------NTHTT--------L-NIPEWVSEEAR  206 (237)
T ss_pred             cccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhc-----------ccccc--------c-CCcccCCHHHH
Confidence            8999999988889999999999999999999998765321100           00000        0 01111245688


Q ss_pred             HHHHHcCCCCCCCCCCH
Q 048419          581 NLGLFCSAPNPVYRPDM  597 (653)
Q Consensus       581 ~l~~~Cl~~dP~~RPs~  597 (653)
                      +++.+|++.||.+||++
T Consensus       207 ~li~~~l~~dp~~R~~~  223 (237)
T cd05576         207 SLLQQLLQFNPTERLGA  223 (237)
T ss_pred             HHHHHHccCCHHHhcCC
Confidence            99999999999999997

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.98  E-value=1.8e-31  Score=298.31  Aligned_cols=268  Identities=19%  Similarity=0.185  Sum_probs=176.3

Q ss_pred             hhcCcCcceeeeeeCcEEEEEEEeCCC----CcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeee------ec
Q 048419          328 VTKGFGEQNLVGSGGFGRVYRGLMPSL----GLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGW------CR  397 (653)
Q Consensus       328 at~~f~~~~~LG~G~fg~Vy~~~~~~~----~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~------~~  397 (653)
                      ..++|...+.||+|+||.||+|.+..+    +..||||++.....  .+....|  .+....+.++..++..      +.
T Consensus       130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~--~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~  205 (566)
T PLN03225        130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA--VEIWMNE--RVRRACPNSCADFVYGFLEPVSSK  205 (566)
T ss_pred             ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch--hHHHHHH--HHHhhchhhHHHHHHhhhcccccc
Confidence            457899999999999999999999888    89999999754322  1111111  1222222232222211      24


Q ss_pred             ccceeEEEEeccCCCCchhhhhcccccc---------------cccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCC
Q 048419          398 KQDELLLVYDYVPNGSLDKLLFDKDHKL---------------RKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVK  462 (653)
Q Consensus       398 ~~~~~~lV~E~~~~gsL~~~l~~~~~~~---------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlk  462 (653)
                      .....++||||+++++|.+++.......               ........+..++.||+.||.|||+   ++|+|||||
T Consensus       206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~---~gIiHRDLK  282 (566)
T PLN03225        206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHS---TGIVHRDVK  282 (566)
T ss_pred             cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHH---CCEEeCcCC
Confidence            5567999999999999999987542100               0111234456799999999999999   899999999


Q ss_pred             CCcEEEcC-CCcEEEEeecCcccccCCCCCcccccccCCcccCccccccC----------------------CCCCccce
Q 048419          463 PSNILLDT-YLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTG----------------------KATTSTDV  519 (653)
Q Consensus       463 p~NIll~~-~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----------------------~~~~ksDV  519 (653)
                      |+|||++. ++.+||+|||+++.+............+++.|+|||.+...                      .++.++||
T Consensus       283 P~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DV  362 (566)
T PLN03225        283 PQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDI  362 (566)
T ss_pred             HHHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCccc
Confidence            99999986 57999999999986654433334456789999999965322                      23456799


Q ss_pred             eehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhh-cccchhHhhhhcc-----CcCC--HHHHHHHHHHHHHcCCCCC
Q 048419          520 YSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELH-LEGEITQAIDQTL-----DYYD--LAEAELVLNLGLFCSAPNP  591 (653)
Q Consensus       520 ~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~d~~l-----~~~~--~~~~~~l~~l~~~Cl~~dP  591 (653)
                      |||||+||||+++..+.+.....    +...+.... ........+.+..     ..+.  ........+|+.+||+.||
T Consensus       363 wSlGviL~el~~~~~~~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP  438 (566)
T PLN03225        363 YSAGLIFLQMAFPNLRSDSNLIQ----FNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKG  438 (566)
T ss_pred             HHHHHHHHHHHhCcCCCchHHHH----HHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCc
Confidence            99999999999987765432111    100000000 0000000111100     0000  0012345589999999999


Q ss_pred             CCCCCHHHHHHHHcC
Q 048419          592 VYRPDMRRVVEFLLG  606 (653)
Q Consensus       592 ~~RPs~~evl~~L~~  606 (653)
                      .+|||+.|++++-..
T Consensus       439 ~kR~ta~e~L~Hpff  453 (566)
T PLN03225        439 RQRISAKAALAHPYF  453 (566)
T ss_pred             ccCCCHHHHhCCcCc
Confidence            999999999997544

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.97  E-value=1.3e-31  Score=267.90  Aligned_cols=239  Identities=29%  Similarity=0.384  Sum_probs=195.7

Q ss_pred             CcEEEEEEEeCCCCcEEEEEEeccCchhh-HHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEeccCCCCchhhhhc
Q 048419          342 GFGRVYRGLMPSLGLEVAIKRIGHNSQQG-MKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFD  420 (653)
Q Consensus       342 ~fg~Vy~~~~~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~  420 (653)
                      +||.||+|...++++.+++|++....... .+.+.+|++.+++++|+|++++++++......++++||+++++|.+++..
T Consensus         1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~   80 (244)
T smart00220        1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK   80 (244)
T ss_pred             CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence            58999999998889999999997665444 68899999999999999999999999999999999999999999999866


Q ss_pred             ccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCCCCcccccccCC
Q 048419          421 KDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTL  500 (653)
Q Consensus       421 ~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~  500 (653)
                      ..     .+++.+++.++.++++++.|||+   .+++|+||+|+||++++++.++|+|||.+.......  ......++.
T Consensus        81 ~~-----~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~--~~~~~~~~~  150 (244)
T smart00220       81 RG-----RLSEDEARFYARQILSALEYLHS---NGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG--LLTTFVGTP  150 (244)
T ss_pred             cc-----CCCHHHHHHHHHHHHHHHHHHHH---cCeecCCcCHHHeEECCCCcEEEccccceeeecccc--ccccccCCc
Confidence            43     27889999999999999999999   899999999999999999999999999998765432  233456788


Q ss_pred             cccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhccCcCCHHHHHHHH
Q 048419          501 GYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYYDLAEAELVL  580 (653)
Q Consensus       501 ~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~  580 (653)
                      .|++||.+....++.++|||+||+++++|++|..|+.......  ...+.......    ..      ..........+.
T Consensus       151 ~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~--~~~~~~~~~~~----~~------~~~~~~~~~~~~  218 (244)
T smart00220      151 EYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLL--ELFKKIGKPKP----PF------PPPEWKISPEAK  218 (244)
T ss_pred             CCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHH--HHHHHHhccCC----CC------ccccccCCHHHH
Confidence            9999999988889999999999999999999999987532211  11111111000    00      000000346788


Q ss_pred             HHHHHcCCCCCCCCCCHHHHHH
Q 048419          581 NLGLFCSAPNPVYRPDMRRVVE  602 (653)
Q Consensus       581 ~l~~~Cl~~dP~~RPs~~evl~  602 (653)
                      +++.+|+..+|++||++.++++
T Consensus       219 ~~i~~~l~~~p~~Rp~~~~~~~  240 (244)
T smart00220      219 DLIRKLLVKDPEKRLTAEEALQ  240 (244)
T ss_pred             HHHHHHccCCchhccCHHHHhh
Confidence            9999999999999999999987

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=3.2e-32  Score=274.44  Aligned_cols=258  Identities=27%  Similarity=0.376  Sum_probs=199.2

Q ss_pred             hcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC--ch-----hhHHHHHHHHHHHhhcCCCceeeeeeeec-ccc
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQ-----QGMKEFVAEIMSMGRLRHRNLVQLHGWCR-KQD  400 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~--~~-----~~~~~~~~E~~~l~~l~H~niv~l~g~~~-~~~  400 (653)
                      .++|-..++||+|||+.|||+.+-.....||||+-...  -+     ...+...+|..+-+.|.||.||++++|+. +.+
T Consensus       462 n~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtd  541 (775)
T KOG1151|consen  462 NDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTD  541 (775)
T ss_pred             HHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccc
Confidence            34577778999999999999999888899999986432  11     12345678999999999999999999985 556


Q ss_pred             eeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEE---cCCCcEEEE
Q 048419          401 ELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILL---DTYLNAKLG  477 (653)
Q Consensus       401 ~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~  477 (653)
                      .+|-|+|||+|.+|+-||..+     +.+++++.+.|+.||+.||.||.+. ..+|||-||||.||||   +..|.+||.
T Consensus       542 sFCTVLEYceGNDLDFYLKQh-----klmSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacGeIKIT  615 (775)
T KOG1151|consen  542 SFCTVLEYCEGNDLDFYLKQH-----KLMSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACGEIKIT  615 (775)
T ss_pred             cceeeeeecCCCchhHHHHhh-----hhhhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCcccceeEee
Confidence            789999999999999999775     4589999999999999999999874 4789999999999999   456889999


Q ss_pred             eecCcccccCCCCC------cccccccCCcccCccccccC----CCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHH
Q 048419          478 DFGLAKIYEHGANP------QTTHIVGTLGYLAPELTRTG----KATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLL  547 (653)
Q Consensus       478 DfGla~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~----~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l  547 (653)
                      ||||++.+..+...      .+....||.+|++||++.-+    +.+.|.||||.||++|+.+.|++||.......+.. 
T Consensus       616 DFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdIL-  694 (775)
T KOG1151|consen  616 DFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDIL-  694 (775)
T ss_pred             ecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHH-
Confidence            99999998765443      23446799999999998644    57889999999999999999999998654322211 


Q ss_pred             HHHHHhhhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 048419          548 VDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVE  602 (653)
Q Consensus       548 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~  602 (653)
                      .        ...+..+-.-... .......+...++.+||+..-++|....++..
T Consensus       695 q--------eNTIlkAtEVqFP-~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~  740 (775)
T KOG1151|consen  695 Q--------ENTILKATEVQFP-PKPVVSSEAKAFIRRCLAYRKEDRIDVQQLAC  740 (775)
T ss_pred             h--------hhchhcceeccCC-CCCccCHHHHHHHHHHHHhhhhhhhhHHHHcc
Confidence            0        1111111000000 01122456778999999999999988777653

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=99.97  E-value=3.7e-32  Score=279.05  Aligned_cols=246  Identities=23%  Similarity=0.346  Sum_probs=194.0

Q ss_pred             ceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC--chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEeccCCC
Q 048419          335 QNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNG  412 (653)
Q Consensus       335 ~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~g  412 (653)
                      .++||.|-||+||-|+++.+|+.||||++.+.  .......+.+|+.+|++++||.||.+...|+..+..+.|||-+.| 
T Consensus       569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~G-  647 (888)
T KOG4236|consen  569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHG-  647 (888)
T ss_pred             HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcc-
Confidence            46899999999999999999999999999754  344557889999999999999999999999999999999999955 


Q ss_pred             CchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcC---CCcEEEEeecCcccccCCC
Q 048419          413 SLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDT---YLNAKLGDFGLAKIYEHGA  489 (653)
Q Consensus       413 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~DfGla~~~~~~~  489 (653)
                      +..+.+-...   +..|++..-.-++.||+-||.|||.   ++|+|+||||+||||.+   -..+||||||.|+.+....
T Consensus       648 DMLEMILSsE---kgRL~er~TkFlvtQIL~ALr~LH~---knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEks  721 (888)
T KOG4236|consen  648 DMLEMILSSE---KGRLPERITKFLVTQILVALRYLHF---KNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKS  721 (888)
T ss_pred             hHHHHHHHhh---cccchHHHHHHHHHHHHHHHHHhhh---cceeeccCCchheeeccCCCCCceeeccccceeecchhh
Confidence            5544444433   4568888888889999999999999   99999999999999944   4569999999999987644


Q ss_pred             CCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhccC
Q 048419          490 NPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLD  569 (653)
Q Consensus       490 ~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~  569 (653)
                      .  ...++||+.|+|||++.++.|+..-|+||.||++|--++|..||....+..+..  +.+.-.+.....         
T Consensus       722 F--RrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIndQI--QNAaFMyPp~PW---------  788 (888)
T KOG4236|consen  722 F--RRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQI--QNAAFMYPPNPW---------  788 (888)
T ss_pred             h--hhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccchhHHh--hccccccCCCch---------
Confidence            3  345789999999999999999999999999999999999999997644322110  000001111111         


Q ss_pred             cCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 048419          570 YYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEF  603 (653)
Q Consensus       570 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  603 (653)
                         .+......+|+...|+..-.+|-+....+.+
T Consensus       789 ---~eis~~AidlIn~LLqVkm~kRysvdk~lsh  819 (888)
T KOG4236|consen  789 ---SEISPEAIDLINNLLQVKMRKRYSVDKSLSH  819 (888)
T ss_pred             ---hhcCHHHHHHHHHHHHHHHHHhcchHhhccc
Confidence               1223456677777777777777777666544

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.97  E-value=9.6e-32  Score=285.17  Aligned_cols=244  Identities=24%  Similarity=0.280  Sum_probs=198.8

Q ss_pred             hcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhc-CCCceeeeeeeecccceeEEEEe
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRL-RHRNLVQLHGWCRKQDELLLVYD  407 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~E  407 (653)
                      +..|.....+|.|+|+.|-++.+..+++..+||++....    .+-.+|+.++... +|+|++++.+.+.+..+.|+|||
T Consensus       321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~----~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e  396 (612)
T KOG0603|consen  321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA----DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVME  396 (612)
T ss_pred             chhhccccccCCCCccceeeeeccccccchhheeccccc----cccccccchhhhhcCCCcceeecceecCCceeeeeeh
Confidence            456777778999999999999999999999999996552    2234566555555 79999999999999999999999


Q ss_pred             ccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEE-cCCCcEEEEeecCccccc
Q 048419          408 YVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILL-DTYLNAKLGDFGLAKIYE  486 (653)
Q Consensus       408 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll-~~~~~~kl~DfGla~~~~  486 (653)
                      .+.++-|.+.+.....     .. .++..|+.+|+.|+.|||+   +++|||||||+|||+ ++.++++|+|||.++...
T Consensus       397 ~l~g~ell~ri~~~~~-----~~-~e~~~w~~~lv~Av~~LH~---~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~  467 (612)
T KOG0603|consen  397 LLDGGELLRRIRSKPE-----FC-SEASQWAAELVSAVDYLHE---QGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELE  467 (612)
T ss_pred             hccccHHHHHHHhcch-----hH-HHHHHHHHHHHHHHHHHHh---cCeeecCCChhheeecCCCCcEEEEEechhhhCc
Confidence            9999888777765431     22 6777899999999999999   999999999999999 699999999999998765


Q ss_pred             CCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhh
Q 048419          487 HGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQ  566 (653)
Q Consensus       487 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  566 (653)
                      ..    ....+-|..|.|||.+....+++++|+||||++||||++|+.|+.......  .+.    .....+        
T Consensus       468 ~~----~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~--ei~----~~i~~~--------  529 (612)
T KOG0603|consen  468 RS----CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGI--EIH----TRIQMP--------  529 (612)
T ss_pred             hh----hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchH--HHH----HhhcCC--------
Confidence            43    233466889999999999999999999999999999999999998654431  111    111111        


Q ss_pred             ccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          567 TLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       567 ~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                         .+....+....+|+.+||+.||.+||+|.++..+-..
T Consensus       530 ---~~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~  566 (612)
T KOG0603|consen  530 ---KFSECVSDEAKDLLQQLLQVDPALRLGADEIGAHPWF  566 (612)
T ss_pred             ---ccccccCHHHHHHHHHhccCChhhCcChhhhccCcch
Confidence               1223345778899999999999999999999987665

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.97  E-value=1e-30  Score=285.34  Aligned_cols=267  Identities=18%  Similarity=0.211  Sum_probs=185.7

Q ss_pred             hhcCcCcceeeeeeCcEEEEEEEeC----------------CCCcEEEEEEeccCchhhHHH--------------HHHH
Q 048419          328 VTKGFGEQNLVGSGGFGRVYRGLMP----------------SLGLEVAIKRIGHNSQQGMKE--------------FVAE  377 (653)
Q Consensus       328 at~~f~~~~~LG~G~fg~Vy~~~~~----------------~~~~~vavK~~~~~~~~~~~~--------------~~~E  377 (653)
                      ..++|++.++||+|+||.||+|...                ..++.||||++........++              ...|
T Consensus       143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE  222 (507)
T PLN03224        143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE  222 (507)
T ss_pred             cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence            4678999999999999999999752                235679999986543332333              3447


Q ss_pred             HHHHhhcCCCce-----eeeeeeecc--------cceeEEEEeccCCCCchhhhhccccc-------------------c
Q 048419          378 IMSMGRLRHRNL-----VQLHGWCRK--------QDELLLVYDYVPNGSLDKLLFDKDHK-------------------L  425 (653)
Q Consensus       378 ~~~l~~l~H~ni-----v~l~g~~~~--------~~~~~lV~E~~~~gsL~~~l~~~~~~-------------------~  425 (653)
                      +.++.+++|.++     ++++++|..        .+..+|||||+++++|.++|+.....                   .
T Consensus       223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~  302 (507)
T PLN03224        223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP  302 (507)
T ss_pred             HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence            777788877654     677788753        34689999999999999999753210                   0


Q ss_pred             cccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCCCCcccccccCCcccCc
Q 048419          426 RKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAP  505 (653)
Q Consensus       426 ~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aP  505 (653)
                      ...++|..+..++.|++.+|.|||+   ++|+||||||+|||++.++.+||+|||+++..............+++.|+||
T Consensus       303 ~~~~~~~~~~~i~~ql~~aL~~lH~---~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aP  379 (507)
T PLN03224        303 QDKRDINVIKGVMRQVLTGLRKLHR---IGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPP  379 (507)
T ss_pred             cccCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeCh
Confidence            1235677889999999999999999   8999999999999999999999999999976543322222223457899999


Q ss_pred             cccccCCC----------------------CCccceeehHHHHHHHHhCCC-CCChhhhhhH------HHHHHHHHhhhc
Q 048419          506 ELTRTGKA----------------------TTSTDVYSYGILMLEVACGRR-SIEPQKAAAE------LLLVDWVKELHL  556 (653)
Q Consensus       506 E~~~~~~~----------------------~~ksDV~s~Gvvl~elltG~~-p~~~~~~~~~------~~l~~~~~~~~~  556 (653)
                      |.+.....                      ..+.||||+||+++||++|.. |+........      ..+..|..  ..
T Consensus       380 E~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~--~~  457 (507)
T PLN03224        380 EELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRM--YK  457 (507)
T ss_pred             hhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHh--hc
Confidence            98754321                      235799999999999999875 6643211100      01111110  00


Q ss_pred             ccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCC---CCCCCHHHHHHHHcC
Q 048419          557 EGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNP---VYRPDMRRVVEFLLG  606 (653)
Q Consensus       557 ~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP---~~RPs~~evl~~L~~  606 (653)
                      ....    +-  . ..........+|+.+||..+|   .+|+|+.|+++|-..
T Consensus       458 ~~~~----~~--~-~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~f  503 (507)
T PLN03224        458 GQKY----DF--S-LLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRFF  503 (507)
T ss_pred             ccCC----Cc--c-cccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCCc
Confidence            0000    00  0 011224667888899998765   689999999987543

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.97  E-value=1.4e-31  Score=240.63  Aligned_cols=266  Identities=23%  Similarity=0.297  Sum_probs=198.4

Q ss_pred             cCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCch--hhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEecc
Q 048419          332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQ--QGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYV  409 (653)
Q Consensus       332 f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~  409 (653)
                      |...++||+|.+|+||||+..++++.||+|+++..+.  ..-...++|+-+++.|+|+|||++++....++.+-+|+|||
T Consensus         4 ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~c   83 (292)
T KOG0662|consen    4 YDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFC   83 (292)
T ss_pred             hHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHHh
Confidence            4445689999999999999999999999999875432  22356789999999999999999999999999999999999


Q ss_pred             CCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCC
Q 048419          410 PNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGA  489 (653)
Q Consensus       410 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~  489 (653)
                      .. +|..+.....    ..++.+....+..|+++||.++|+   +++.||||||.|.|++.+|++|++|||+++.+....
T Consensus        84 dq-dlkkyfdsln----g~~d~~~~rsfmlqllrgl~fchs---hnvlhrdlkpqnllin~ngelkladfglarafgipv  155 (292)
T KOG0662|consen   84 DQ-DLKKYFDSLN----GDLDPEIVRSFMLQLLRGLGFCHS---HNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPV  155 (292)
T ss_pred             hH-HHHHHHHhcC----CcCCHHHHHHHHHHHHhhhhhhhh---hhhhhccCCcceEEeccCCcEEecccchhhhcCCce
Confidence            54 7877775543    447888888999999999999999   999999999999999999999999999999775432


Q ss_pred             CCcccccccCCcccCccccccCC-CCCccceeehHHHHHHHHhCCCCCC-hhhhhhHHHHHHHHHhhhcccch---hHhh
Q 048419          490 NPQTTHIVGTLGYLAPELTRTGK-ATTSTDVYSYGILMLEVACGRRSIE-PQKAAAELLLVDWVKELHLEGEI---TQAI  564 (653)
Q Consensus       490 ~~~~~~~~gt~~y~aPE~~~~~~-~~~ksDV~s~Gvvl~elltG~~p~~-~~~~~~~~~l~~~~~~~~~~~~~---~~~~  564 (653)
                      .. ....+-|..|.+|+++.+.+ |+...|+||.||++.|+....+|.- +.+..++....-|+.....++..   ..+.
T Consensus       156 rc-ysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lp  234 (292)
T KOG0662|consen  156 RC-YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLP  234 (292)
T ss_pred             Ee-eeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCC
Confidence            22 12235688999999998765 7889999999999999998655544 43333333322233222222221   2222


Q ss_pred             hhcc-CcCCH---------HHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          565 DQTL-DYYDL---------AEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       565 d~~l-~~~~~---------~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                      |-.. ..++.         .....-.++..+.+.-+|..|.++++.+++-..
T Consensus       235 dyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqhpyf  286 (292)
T KOG0662|consen  235 DYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQHPYF  286 (292)
T ss_pred             CCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcCccc
Confidence            2111 11111         111233466666777799999999999887543

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=1.1e-31  Score=268.60  Aligned_cols=240  Identities=24%  Similarity=0.312  Sum_probs=195.9

Q ss_pred             CcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC---chhhHHHHHHHHHHHhhc-CCCceeeeeeeecccceeEEEE
Q 048419          331 GFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN---SQQGMKEFVAEIMSMGRL-RHRNLVQLHGWCRKQDELLLVY  406 (653)
Q Consensus       331 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~  406 (653)
                      +|....+||+|+||.|.++..+++.+.+|||++++.   ..++.+--+.|-++|.-. +-|.++++...+..-+.+|+||
T Consensus       350 DFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFVM  429 (683)
T KOG0696|consen  350 DFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFVM  429 (683)
T ss_pred             ccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeEE
Confidence            588899999999999999999999999999999765   233344445666666655 5678999999999999999999


Q ss_pred             eccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccccc
Q 048419          407 DYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE  486 (653)
Q Consensus       407 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~  486 (653)
                      ||+.||+|--++.+.+.     +.++.+.-.+..||-||-+||+   ++|+.||||.+|||||.+|.+||+|||+++.--
T Consensus       430 EyvnGGDLMyhiQQ~Gk-----FKEp~AvFYAaEiaigLFFLh~---kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni  501 (683)
T KOG0696|consen  430 EYVNGGDLMYHIQQVGK-----FKEPVAVFYAAEIAIGLFFLHS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENI  501 (683)
T ss_pred             EEecCchhhhHHHHhcc-----cCCchhhhhhHHHHHHhhhhhc---CCeeeeeccccceEeccCCceEeeecccccccc
Confidence            99999999988877543     7778888999999999999999   999999999999999999999999999998421


Q ss_pred             CCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhh
Q 048419          487 HGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQ  566 (653)
Q Consensus       487 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  566 (653)
                      . ....+...+||+.|+|||++....|....|-|||||+||||+.|+.||++.++.+-  +              +.+-+
T Consensus       502 ~-~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~el--F--------------~aI~e  564 (683)
T KOG0696|consen  502 F-DGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDEL--F--------------QAIME  564 (683)
T ss_pred             c-CCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHH--H--------------HHHHH
Confidence            1 22334567999999999999999999999999999999999999999998765421  1              11111


Q ss_pred             ccCcCCHHHHHHHHHHHHHcCCCCCCCCC
Q 048419          567 TLDYYDLAEAELVLNLGLFCSAPNPVYRP  595 (653)
Q Consensus       567 ~l~~~~~~~~~~l~~l~~~Cl~~dP~~RP  595 (653)
                      .--.++-..+.+...++...+...|.+|.
T Consensus       565 hnvsyPKslSkEAv~ickg~ltK~P~kRL  593 (683)
T KOG0696|consen  565 HNVSYPKSLSKEAVAICKGLLTKHPGKRL  593 (683)
T ss_pred             ccCcCcccccHHHHHHHHHHhhcCCcccc
Confidence            11123444456778888888889998884

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=99.97  E-value=9.5e-31  Score=284.51  Aligned_cols=263  Identities=24%  Similarity=0.342  Sum_probs=212.7

Q ss_pred             CHHHHHHhhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhc-CCCceeeeeeeecc-
Q 048419          321 KYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRL-RHRNLVQLHGWCRK-  398 (653)
Q Consensus       321 ~~~el~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~-  398 (653)
                      .++.+..-++-|++..+||.|.+|.||+++...+++.+|+|+...... ..++...|.++++.+ .|||++.++|++.. 
T Consensus        10 ~~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d-~deEiE~eynil~~~~~hpnv~~fyg~~~k~   88 (953)
T KOG0587|consen   10 DLSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTED-EEEEIELEYNMLKKYSHHPNVATFYGAFIKK   88 (953)
T ss_pred             chhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCcc-ccHHHHHHHHHHHhccCCCCcceEEEEEEEe
Confidence            344444556778889999999999999999999999999999866543 335667888899888 69999999999854 


Q ss_pred             ----cceeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcE
Q 048419          399 ----QDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNA  474 (653)
Q Consensus       399 ----~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~  474 (653)
                          .+.+|||||||.+||..+++....   ...+.|..+.-|+..++.||++||.   ..++|||||-.||||+.++.+
T Consensus        89 ~~~~~DqLWLVMEfC~gGSVTDLVKn~~---g~rl~E~~IaYI~re~lrgl~HLH~---nkviHRDikG~NiLLT~e~~V  162 (953)
T KOG0587|consen   89 DPGNGDQLWLVMEFCGGGSVTDLVKNTK---GNRLKEEWIAYILREILRGLAHLHN---NKVIHRDIKGQNVLLTENAEV  162 (953)
T ss_pred             cCCCCCeEEEEeeccCCccHHHHHhhhc---ccchhhHHHHHHHHHHHHHHHHHhh---cceeeecccCceEEEeccCcE
Confidence                357999999999999999998765   5679999999999999999999999   999999999999999999999


Q ss_pred             EEEeecCcccccCCCCCcccccccCCcccCccccccC-----CCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHH
Q 048419          475 KLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTG-----KATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVD  549 (653)
Q Consensus       475 kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~  549 (653)
                      ||+|||.+..+...- .......||+.|||||++...     .|+..+|+||||++..||.-|.+|+..+.+...+.   
T Consensus       163 KLvDFGvSaQldsT~-grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF---  238 (953)
T KOG0587|consen  163 KLVDFGVSAQLDSTV-GRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALF---  238 (953)
T ss_pred             EEeeeeeeeeeeccc-ccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhhc---
Confidence            999999998765432 233446899999999998643     46779999999999999999999998765532211   


Q ss_pred             HHHhhhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          550 WVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       550 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                               .+.....+.|. .+..-.+.+.+++..||..|-++||++.+++++-
T Consensus       239 ---------~IpRNPPPkLk-rp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~hp  283 (953)
T KOG0587|consen  239 ---------LIPRNPPPKLK-RPKKWSKKFNDFISTCLVKDYEQRPSTEELLKHP  283 (953)
T ss_pred             ---------cCCCCCCcccc-chhhHHHHHHHHHHHHHhhccccCcchhhhccCC
Confidence                     11111122221 1223357899999999999999999999998753

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.97  E-value=3e-32  Score=257.18  Aligned_cols=267  Identities=25%  Similarity=0.382  Sum_probs=202.5

Q ss_pred             cCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC-chhh-HHHHHHHHHHHhhcCCCceeeeeeeeccc--------ce
Q 048419          332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN-SQQG-MKEFVAEIMSMGRLRHRNLVQLHGWCRKQ--------DE  401 (653)
Q Consensus       332 f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~-~~~~-~~~~~~E~~~l~~l~H~niv~l~g~~~~~--------~~  401 (653)
                      |....++|+|.||.||+|+.+.+|+.||+|++-.. .+++ -...++|+.+|..|+|+|++.+++.|...        ..
T Consensus        19 yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~t   98 (376)
T KOG0669|consen   19 YEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRAT   98 (376)
T ss_pred             HHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccce
Confidence            44467899999999999999999999999886443 2222 23457899999999999999999998543        24


Q ss_pred             eEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecC
Q 048419          402 LLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGL  481 (653)
Q Consensus       402 ~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl  481 (653)
                      +++|+++|+. +|.-+|....    ..++..++.++..++..||.|+|.   ..|+|||+||.|+|++.++.+||+|||+
T Consensus        99 ~ylVf~~ceh-DLaGlLsn~~----vr~sls~Ikk~Mk~Lm~GL~~iHr---~kilHRDmKaaNvLIt~dgilklADFGl  170 (376)
T KOG0669|consen   99 FYLVFDFCEH-DLAGLLSNRK----VRFSLSEIKKVMKGLMNGLYYIHR---NKILHRDMKAANVLITKDGILKLADFGL  170 (376)
T ss_pred             eeeeHHHhhh-hHHHHhcCcc----ccccHHHHHHHHHHHHHHHHHHHH---hhHHhhcccHhhEEEcCCceEEeecccc
Confidence            8999999976 8888886652    457888999999999999999999   8999999999999999999999999999


Q ss_pred             cccccCCCC---CcccccccCCcccCccccccC-CCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHH------
Q 048419          482 AKIYEHGAN---PQTTHIVGTLGYLAPELTRTG-KATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWV------  551 (653)
Q Consensus       482 a~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~-~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~------  551 (653)
                      ++.+....+   +.-+..+-|..|++||.+.+. .++++.|||+.||++.||+||.+-+++..+.....+..-+      
T Consensus       171 ar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tk  250 (376)
T KOG0669|consen  171 ARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITK  250 (376)
T ss_pred             ccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCc
Confidence            987654322   223445568999999988764 6899999999999999999999998877765554433221      


Q ss_pred             --HhhhcccchhHhhhhc-c--CcCC--HHH------HHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          552 --KELHLEGEITQAIDQT-L--DYYD--LAE------AELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       552 --~~~~~~~~~~~~~d~~-l--~~~~--~~~------~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                        |+....-.+.+.+.-. +  +.+.  .+.      ....++|+..++..||.+||++.+++.+-..
T Consensus       251 evWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F  318 (376)
T KOG0669|consen  251 EVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDFF  318 (376)
T ss_pred             ccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhhh
Confidence              1111111111112100 1  0000  111      2367899999999999999999999987654

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=1.5e-31  Score=273.99  Aligned_cols=283  Identities=24%  Similarity=0.304  Sum_probs=224.0

Q ss_pred             cCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC---chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEec
Q 048419          332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN---SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDY  408 (653)
Q Consensus       332 f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~  408 (653)
                      +.....||-||||.|=++........+|+|.+++.   .....+....|-.+|.+.+.|.||+++--+.+.+..|++||-
T Consensus       422 l~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmEa  501 (732)
T KOG0614|consen  422 LKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLMEA  501 (732)
T ss_pred             hhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhHHh
Confidence            34466799999999999988765556888888653   444556778899999999999999999999999999999999


Q ss_pred             cCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCC
Q 048419          409 VPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHG  488 (653)
Q Consensus       409 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~  488 (653)
                      |-||.|...|..++     .++.....-++..+++|++|||+   ++||.|||||+|.+|+.+|-+||.|||+|+.+..+
T Consensus       502 ClGGElWTiLrdRg-----~Fdd~tarF~~acv~EAfeYLH~---k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g  573 (732)
T KOG0614|consen  502 CLGGELWTILRDRG-----SFDDYTARFYVACVLEAFEYLHR---KGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSG  573 (732)
T ss_pred             hcCchhhhhhhhcC-----CcccchhhhhHHHHHHHHHHHHh---cCceeccCChhheeeccCCceEEeehhhHHHhccC
Confidence            99999999998754     47788888899999999999999   99999999999999999999999999999987653


Q ss_pred             CCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhcc
Q 048419          489 ANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTL  568 (653)
Q Consensus       489 ~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l  568 (653)
                        ..+..++||+.|.|||++.+...+.+.|.||||+++|||++|++||...++.....+.   .    .|     +|.  
T Consensus       574 --~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~I---L----kG-----id~--  637 (732)
T KOG0614|consen  574 --RKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLI---L----KG-----IDK--  637 (732)
T ss_pred             --CceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHH---H----hh-----hhh--
Confidence              4567789999999999999999999999999999999999999999987764322211   0    00     110  


Q ss_pred             CcCCHHHHHHHHHHHHHcCCCCCCCCCC-----HHHHHHHHcCCC------CCC--CCCCccccccccccCCcCCCCCCc
Q 048419          569 DYYDLAEAELVLNLGLFCSAPNPVYRPD-----MRRVVEFLLGDS------SLP--PLPPDIHLKDTRNIMGFSDFPNDS  635 (653)
Q Consensus       569 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs-----~~evl~~L~~~~------~~p--~~p~~~~~~~~~~~~~~~~~~~~~  635 (653)
                      -.++....+...+|+++.+..+|.+|--     +.+|-++-+.+.      ...  +.|...+.+.......|+.+|.+.
T Consensus       638 i~~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~gfdweglr~~~L~pPi~~~va~ptD~s~Fd~~p~dn  717 (732)
T KOG0614|consen  638 IEFPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHRWFEGFDWEGLRSRTLPPPIIPSVANPTDVSNFDNFPPDN  717 (732)
T ss_pred             hhcccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhhhhhcCChhhhhhccCCCCccccCCCcccchhccCCCccc
Confidence            0122233466788899999999999975     788888765321      111  122223455666677788888766


Q ss_pred             ccc
Q 048419          636 DFF  638 (653)
Q Consensus       636 ~~~  638 (653)
                      ++-
T Consensus       718 d~p  720 (732)
T KOG0614|consen  718 DEP  720 (732)
T ss_pred             CCC
Confidence            653

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.97  E-value=6.3e-31  Score=262.05  Aligned_cols=266  Identities=21%  Similarity=0.269  Sum_probs=210.3

Q ss_pred             HHHHHHhhcCcCcceeeeeeCcEEEEEEEeCCC-----CcEEEEEEeccC-chhhHHHHHHHHHHHhhcCCCceeeeeee
Q 048419          322 YAELASVTKGFGEQNLVGSGGFGRVYRGLMPSL-----GLEVAIKRIGHN-SQQGMKEFVAEIMSMGRLRHRNLVQLHGW  395 (653)
Q Consensus       322 ~~el~~at~~f~~~~~LG~G~fg~Vy~~~~~~~-----~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~  395 (653)
                      .+|+.....+++...++-+|.||.||+|.+.+.     .+.|-+|.++.. +.-....++.|...+..+.|||+.++.+.
T Consensus       276 ~~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V  355 (563)
T KOG1024|consen  276 LQELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGV  355 (563)
T ss_pred             HHhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEE
Confidence            556666667788888999999999999977543     345667777543 44456788999999999999999999999


Q ss_pred             ecccc-eeEEEEeccCCCCchhhhhccc---ccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCC
Q 048419          396 CRKQD-ELLLVYDYVPNGSLDKLLFDKD---HKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTY  471 (653)
Q Consensus       396 ~~~~~-~~~lV~E~~~~gsL~~~l~~~~---~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~  471 (653)
                      +.+.. ..+.+|.++.-|+|..+|....   .+....++-.+...++.|++.|++|||+   +++||.||..+|.++|+.
T Consensus       356 ~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~---~~ViHkDiAaRNCvIdd~  432 (563)
T KOG1024|consen  356 SIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHN---HGVIHKDIAARNCVIDDQ  432 (563)
T ss_pred             EeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHh---cCcccchhhhhcceehhh
Confidence            87654 6789999999999999998321   1223557778889999999999999999   999999999999999999


Q ss_pred             CcEEEEeecCcccccCCCCCcc-cccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHH
Q 048419          472 LNAKLGDFGLAKIYEHGANPQT-THIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVD  549 (653)
Q Consensus       472 ~~~kl~DfGla~~~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~  549 (653)
                      .++||+|=.+++.+-....... .....+..||+||.+.+..|+.++|||||||+||||+| |+.|+..-++.+...   
T Consensus       433 LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~---  509 (563)
T KOG1024|consen  433 LQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEH---  509 (563)
T ss_pred             eeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHH---
Confidence            9999999999986644433222 22234678999999999999999999999999999999 888987665533211   


Q ss_pred             HHHhhhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          550 WVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       550 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                      +    ..+|.       + -..+..++.++..++.-||..+|++||+++|++.=|.
T Consensus       510 y----lkdGy-------R-laQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLs  553 (563)
T KOG1024|consen  510 Y----LKDGY-------R-LAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLS  553 (563)
T ss_pred             H----Hhccc-------e-ecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHH
Confidence            1    11111       1 1234557788999999999999999999999998763

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=99.96  E-value=1.8e-30  Score=238.75  Aligned_cols=199  Identities=28%  Similarity=0.351  Sum_probs=168.1

Q ss_pred             ceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC-chhhHHHHHHHHHHHhhc-CCCceeeeeeeecccceeEEEEeccCCC
Q 048419          335 QNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN-SQQGMKEFVAEIMSMGRL-RHRNLVQLHGWCRKQDELLLVYDYVPNG  412 (653)
Q Consensus       335 ~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~E~~~~g  412 (653)
                      ...||+|++|.|-+.++..+|+..|+|++... ..+..++.+.|+.+..+. .+|.+|.++|....+...++.||.|. .
T Consensus        51 i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~M~-t  129 (282)
T KOG0984|consen   51 IEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICMELMD-T  129 (282)
T ss_pred             hhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHHHhh-h
Confidence            45699999999999999999999999999765 455667788898876655 79999999999999999999999994 4


Q ss_pred             CchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCCCCc
Q 048419          413 SLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQ  492 (653)
Q Consensus       413 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~  492 (653)
                      ||+.+-.+... ....+++..+-+|+.-+.+||.|||+.  ..++|||+||+|||++.+|++|+||||++..+..+.  .
T Consensus       130 Sldkfy~~v~~-~g~~ipE~vlGkIa~Svv~al~~L~~k--L~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSi--A  204 (282)
T KOG0984|consen  130 SLDKFYRKVLK-KGGTIPEDVLGKIAVSVVHALEFLHSK--LSVIHRDVKPSNILINYDGQVKICDFGISGYLVDSI--A  204 (282)
T ss_pred             hHHHHHHHHHh-cCCcCchHHhhHhHHHHHHHHHHHHHH--hhhhhccCCcceEEEccCCcEEEcccccceeehhhh--H
Confidence            88776655332 245688999999999999999999995  789999999999999999999999999998765432  2


Q ss_pred             ccccccCCcccCcccccc----CCCCCccceeehHHHHHHHHhCCCCCChh
Q 048419          493 TTHIVGTLGYLAPELTRT----GKATTSTDVYSYGILMLEVACGRRSIEPQ  539 (653)
Q Consensus       493 ~~~~~gt~~y~aPE~~~~----~~~~~ksDV~s~Gvvl~elltG~~p~~~~  539 (653)
                      .+.-.|...|||||.+..    ..|+.|+||||||+.+.||.+++.|++..
T Consensus       205 kt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w  255 (282)
T KOG0984|consen  205 KTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESW  255 (282)
T ss_pred             HHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhcccccccc
Confidence            233467789999998753    36889999999999999999999999754

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=6e-30  Score=250.07  Aligned_cols=247  Identities=23%  Similarity=0.314  Sum_probs=194.3

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC---chhhHHHHHHHHHHHhhc-CCCceeeeeeeecccceeEEE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN---SQQGMKEFVAEIMSMGRL-RHRNLVQLHGWCRKQDELLLV  405 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV  405 (653)
                      ++|...++||+|+|++|-.+.+..+.+.+|+|++++.   ..+...=...|-....+. +||.+|.+..++..+..+++|
T Consensus       250 ~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlffv  329 (593)
T KOG0695|consen  250 QDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFFV  329 (593)
T ss_pred             ccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEEE
Confidence            5688899999999999999999999999999998754   333344445566666665 799999999999999999999


Q ss_pred             EeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccc
Q 048419          406 YDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIY  485 (653)
Q Consensus       406 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~  485 (653)
                      .||.+||+|--++.++.     .|+++..+-....|..||.|||+   ++|+.||||.+|||||+.|.+||.|+|+++.-
T Consensus       330 ieyv~ggdlmfhmqrqr-----klpeeharfys~ei~lal~flh~---rgiiyrdlkldnvlldaeghikltdygmcke~  401 (593)
T KOG0695|consen  330 IEYVNGGDLMFHMQRQR-----KLPEEHARFYSAEICLALNFLHE---RGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEG  401 (593)
T ss_pred             EEEecCcceeeehhhhh-----cCcHHHhhhhhHHHHHHHHHHhh---cCeeeeeccccceEEccCCceeecccchhhcC
Confidence            99999999988876643     48999999999999999999999   99999999999999999999999999999853


Q ss_pred             cCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhh--hhhHHHHHHHHHhhhcccchhHh
Q 048419          486 EHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQK--AAAELLLVDWVKELHLEGEITQA  563 (653)
Q Consensus       486 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~--~~~~~~l~~~~~~~~~~~~~~~~  563 (653)
                      - .....+...+||+.|+|||++.+..|....|-|++||+++||+.|+.||+-..  +.+ ....+++.+...+..+   
T Consensus       402 l-~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d-~ntedylfqvilekqi---  476 (593)
T KOG0695|consen  402 L-GPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPD-MNTEDYLFQVILEKQI---  476 (593)
T ss_pred             C-CCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcc-cchhHHHHHHHhhhcc---
Confidence            2 23345566899999999999999999999999999999999999999997422  111 1111222221111110   


Q ss_pred             hhhccCcCCHHHHHHHHHHHHHcCCCCCCCCC
Q 048419          564 IDQTLDYYDLAEAELVLNLGLFCSAPNPVYRP  595 (653)
Q Consensus       564 ~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RP  595 (653)
                            ..+.....+...+...-|+.||.+|.
T Consensus       477 ------riprslsvkas~vlkgflnkdp~erl  502 (593)
T KOG0695|consen  477 ------RIPRSLSVKASHVLKGFLNKDPKERL  502 (593)
T ss_pred             ------cccceeehhhHHHHHHhhcCCcHHhc
Confidence                  01111234456777788889999885

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=7.4e-31  Score=250.18  Aligned_cols=264  Identities=24%  Similarity=0.334  Sum_probs=203.9

Q ss_pred             CcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC--chhhHHHHHHHHHHHhhcCCCceeeeeeeeccc-----ceeEEE
Q 048419          333 GEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQ-----DELLLV  405 (653)
Q Consensus       333 ~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~-----~~~~lV  405 (653)
                      +..+.||-|+||.||.+.++.+|+.||+|++...  +-...+.+.+|+.+|.-.+|.|++..++...-.     .++|.+
T Consensus        56 ~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~  135 (449)
T KOG0664|consen   56 QPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVL  135 (449)
T ss_pred             CCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHH
Confidence            4467899999999999999999999999998653  334567889999999999999999988865443     257889


Q ss_pred             EeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccc
Q 048419          406 YDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIY  485 (653)
Q Consensus       406 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~  485 (653)
                      +|.|. .+|...+-..     ..|+.+...-++.||++||.|||+   .+|.||||||.|.|++++..+||||||+++..
T Consensus       136 TELmQ-SDLHKIIVSP-----Q~Ls~DHvKVFlYQILRGLKYLHs---A~ILHRDIKPGNLLVNSNCvLKICDFGLARve  206 (449)
T KOG0664|consen  136 TELMQ-SDLHKIIVSP-----QALTPDHVKVFVYQILRGLKYLHT---ANILHRDIKPGNLLVNSNCILKICDFGLARTW  206 (449)
T ss_pred             HHHHH-hhhhheeccC-----CCCCcchhhhhHHHHHhhhHHHhh---cchhhccCCCccEEeccCceEEeccccccccc
Confidence            99984 5888877653     347888888899999999999999   89999999999999999999999999999987


Q ss_pred             cCCCCCcccccccCCcccCccccccC-CCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHh--------hhc
Q 048419          486 EHGANPQTTHIVGTLGYLAPELTRTG-KATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKE--------LHL  556 (653)
Q Consensus       486 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~--------~~~  556 (653)
                      +.+.....+..+-|..|+|||++.+. .|+.+.||||.||++.||+..+..|....+.....+..-+..        ...
T Consensus       207 e~d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~AC  286 (449)
T KOG0664|consen  207 DQRDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYAC  286 (449)
T ss_pred             chhhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHh
Confidence            76666666666778999999999875 589999999999999999999888877665554433321111        111


Q ss_pred             ccchhHhhhhccCc----------CCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          557 EGEITQAIDQTLDY----------YDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       557 ~~~~~~~~d~~l~~----------~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                      +|....++....+.          -....-.+.+.+...++..||+.|.+..+.+.++.
T Consensus       287 EGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~  345 (449)
T KOG0664|consen  287 EGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRY  345 (449)
T ss_pred             hhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhccccc
Confidence            12222222211110          01122244667788899999999999999998774

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=99.96  E-value=2.9e-30  Score=279.51  Aligned_cols=247  Identities=27%  Similarity=0.367  Sum_probs=189.2

Q ss_pred             cCcceeeeeeCcE-EEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhc-CCCceeeeeeeecccceeEEEEecc
Q 048419          332 FGEQNLVGSGGFG-RVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRL-RHRNLVQLHGWCRKQDELLLVYDYV  409 (653)
Q Consensus       332 f~~~~~LG~G~fg-~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~E~~  409 (653)
                      |...+++|.|+-| .||+|...  |+.||||++-..   ...-..+|+..|+.- +|||||++++.-.++..+||..|.|
T Consensus       511 ~~~~eilG~Gs~Gt~Vf~G~ye--~R~VAVKrll~e---~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC  585 (903)
T KOG1027|consen  511 FSPKEILGYGSNGTVVFRGVYE--GREVAVKRLLEE---FFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELC  585 (903)
T ss_pred             eccHHHcccCCCCcEEEEEeeC--CceehHHHHhhH---hHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHh
Confidence            5566789999987 67999996  789999998433   233456899999988 5999999999888899999999999


Q ss_pred             CCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcC-----CCcEEEEeecCccc
Q 048419          410 PNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDT-----YLNAKLGDFGLAKI  484 (653)
Q Consensus       410 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~-----~~~~kl~DfGla~~  484 (653)
                      . .+|.+++...... .....-...+.+..|++.||++||+   .+||||||||.||||+.     ..+++|+|||+++.
T Consensus       586 ~-~sL~dlie~~~~d-~~~~~~i~~~~~l~q~~~GlaHLHs---l~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKk  660 (903)
T KOG1027|consen  586 A-CSLQDLIESSGLD-VEMQSDIDPISVLSQIASGLAHLHS---LKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKK  660 (903)
T ss_pred             h-hhHHHHHhccccc-hhhcccccHHHHHHHHHHHHHHHHh---cccccccCCCceEEEEccCCCcceeEEecccccccc
Confidence            5 5999999874111 1111113457889999999999999   89999999999999965     35799999999998


Q ss_pred             ccCCCCCc--ccccccCCcccCccccccCCCCCccceeehHHHHHHHHhC-CCCCChhhhhhHHHHHHHHHhhhcccchh
Q 048419          485 YEHGANPQ--TTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACG-RRSIEPQKAAAELLLVDWVKELHLEGEIT  561 (653)
Q Consensus       485 ~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG-~~p~~~~~~~~~~~l~~~~~~~~~~~~~~  561 (653)
                      +..+....  .....||-+|+|||.+....-+.++||||+||++|..++| ..||......+...+    ..   ...+.
T Consensus       661 l~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~NIl----~~---~~~L~  733 (903)
T KOG1027|consen  661 LAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQANIL----TG---NYTLV  733 (903)
T ss_pred             cCCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhhhhh----cC---cccee
Confidence            87654432  3346799999999999998889999999999999999986 899986543221110    00   00000


Q ss_pred             HhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 048419          562 QAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEF  603 (653)
Q Consensus       562 ~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  603 (653)
                      .     |. ...++  +..+|+.+|++++|..||++.+|+.+
T Consensus       734 ~-----L~-~~~d~--eA~dLI~~ml~~dP~~RPsa~~VL~H  767 (903)
T KOG1027|consen  734 H-----LE-PLPDC--EAKDLISRMLNPDPQLRPSATDVLNH  767 (903)
T ss_pred             e-----ec-cCchH--HHHHHHHHhcCCCcccCCCHHHHhCC
Confidence            0     00 01111  78899999999999999999999853

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.96  E-value=2.8e-28  Score=237.49  Aligned_cols=212  Identities=35%  Similarity=0.576  Sum_probs=185.2

Q ss_pred             eeeeCcEEEEEEEeCCCCcEEEEEEeccCchh-hHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEeccCCCCchh
Q 048419          338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQ-GMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSLDK  416 (653)
Q Consensus       338 LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~  416 (653)
                      ||+|.+|.||++....+++.+++|++...... ..+.+.+|+..++.++|++++++++++......++++||+++++|.+
T Consensus         1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~   80 (215)
T cd00180           1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD   80 (215)
T ss_pred             CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence            68999999999999888999999999765433 45678999999999999999999999999999999999999999999


Q ss_pred             hhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcC-CCcEEEEeecCcccccCCCCCcccc
Q 048419          417 LLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDT-YLNAKLGDFGLAKIYEHGANPQTTH  495 (653)
Q Consensus       417 ~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~-~~~~kl~DfGla~~~~~~~~~~~~~  495 (653)
                      ++....    ..+++.+++.++.++++++.+||+   .+++|+||+|.||+++. ++.++|+|||.+........ ....
T Consensus        81 ~~~~~~----~~~~~~~~~~~~~~l~~~l~~lh~---~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~-~~~~  152 (215)
T cd00180          81 LLKENE----GKLSEDEILRILLQILEGLEYLHS---NGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS-LLKT  152 (215)
T ss_pred             HHHhcc----CCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc-hhhc
Confidence            987542    348899999999999999999999   89999999999999999 89999999999986644321 1233


Q ss_pred             cccCCcccCccccccC-CCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhccCcCCHH
Q 048419          496 IVGTLGYLAPELTRTG-KATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYYDLA  574 (653)
Q Consensus       496 ~~gt~~y~aPE~~~~~-~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~  574 (653)
                      ..+...|++||..... ..+.++|+|++|+++++|                                             
T Consensus       153 ~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l---------------------------------------------  187 (215)
T cd00180         153 IVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL---------------------------------------------  187 (215)
T ss_pred             ccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH---------------------------------------------
Confidence            4577899999999877 788999999999999999                                             


Q ss_pred             HHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          575 EAELVLNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       575 ~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                        ..+.+++..|++.+|.+||++.++++.+
T Consensus       188 --~~~~~~l~~~l~~~p~~R~~~~~l~~~~  215 (215)
T cd00180         188 --PELKDLIRKMLQKDPEKRPSAKEILEHL  215 (215)
T ss_pred             --HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence              3467889999999999999999998754

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.96  E-value=3.1e-28  Score=255.12  Aligned_cols=216  Identities=25%  Similarity=0.372  Sum_probs=182.7

Q ss_pred             cCHHHHHHhhc---CcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc---hhhHHHHHHHHHHHhhcCCCceeeee
Q 048419          320 FKYAELASVTK---GFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS---QQGMKEFVAEIMSMGRLRHRNLVQLH  393 (653)
Q Consensus       320 f~~~el~~at~---~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~  393 (653)
                      -.|.-|+.+.-   -|...+.||-|+||.|.++...++...+|.|.+++.+   +.......+|-.+|.....+-||+|+
T Consensus       616 SnYiRLkRaKMdKSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLy  695 (1034)
T KOG0608|consen  616 SNYIRLKRAKMDKSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLY  695 (1034)
T ss_pred             hhHHHHHHhhccccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEE
Confidence            44555555543   4778889999999999999988889999999997653   34455678899999999999999999


Q ss_pred             eeecccceeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCc
Q 048419          394 GWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLN  473 (653)
Q Consensus       394 g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~  473 (653)
                      -.|.+.+.+|+||||++||++-.+|-+.+     .+.+...+-.+..+..|+++.|.   .|+|||||||+|||||.+|.
T Consensus       696 ySFQDkdnLYFVMdYIPGGDmMSLLIrmg-----IFeE~LARFYIAEltcAiesVHk---mGFIHRDiKPDNILIDrdGH  767 (1034)
T KOG0608|consen  696 YSFQDKDNLYFVMDYIPGGDMMSLLIRMG-----IFEEDLARFYIAELTCAIESVHK---MGFIHRDIKPDNILIDRDGH  767 (1034)
T ss_pred             EEeccCCceEEEEeccCCccHHHHHHHhc-----cCHHHHHHHHHHHHHHHHHHHHh---ccceecccCccceEEccCCc
Confidence            99999999999999999999999997754     47888888889999999999999   99999999999999999999


Q ss_pred             EEEEeecCccccc---------CCC-----------------C---------------CcccccccCCcccCccccccCC
Q 048419          474 AKLGDFGLAKIYE---------HGA-----------------N---------------PQTTHIVGTLGYLAPELTRTGK  512 (653)
Q Consensus       474 ~kl~DfGla~~~~---------~~~-----------------~---------------~~~~~~~gt~~y~aPE~~~~~~  512 (653)
                      +||.||||++-+.         .+.                 .               ......+||+.|+|||++....
T Consensus       768 IKLTDFGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g  847 (1034)
T KOG0608|consen  768 IKLTDFGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTG  847 (1034)
T ss_pred             eeeeeccccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccC
Confidence            9999999996431         000                 0               0011346999999999999999


Q ss_pred             CCCccceeehHHHHHHHHhCCCCCChhhhhh
Q 048419          513 ATTSTDVYSYGILMLEVACGRRSIEPQKAAA  543 (653)
Q Consensus       513 ~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~  543 (653)
                      ++..+|-||.||+||||+.|+.||-...+.+
T Consensus       848 ~~q~cdwws~gvil~em~~g~~pf~~~tp~~  878 (1034)
T KOG0608|consen  848 YTQLCDWWSVGVILYEMLVGQPPFLADTPGE  878 (1034)
T ss_pred             ccccchhhHhhHHHHHHhhCCCCccCCCCCc
Confidence            9999999999999999999999998766543

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.95  E-value=2.7e-27  Score=234.28  Aligned_cols=200  Identities=32%  Similarity=0.476  Sum_probs=175.2

Q ss_pred             cCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchh-hHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEeccC
Q 048419          332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQ-GMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVP  410 (653)
Q Consensus       332 f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~  410 (653)
                      |...+.||+|++|.||++...++++.+++|.+...... ..+.+.+|++.+++++|+|++++++++......++++||++
T Consensus         1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~   80 (225)
T smart00221        1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE   80 (225)
T ss_pred             CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence            45678999999999999999888899999999766544 67789999999999999999999999999899999999999


Q ss_pred             CCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCCC
Q 048419          411 NGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGAN  490 (653)
Q Consensus       411 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~  490 (653)
                      +++|.+++.....    .+++.+++.++.+++.++.+||+   .+++|+||+|+||+++.++.++|+|||++........
T Consensus        81 ~~~L~~~~~~~~~----~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~  153 (225)
T smart00221       81 GGDLFDYLRKKGG----KLSEEEARFYLRQILEALEYLHS---LGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLA  153 (225)
T ss_pred             CCCHHHHHHhccc----CCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCccc
Confidence            9999999876431    17889999999999999999999   8999999999999999999999999999987654321


Q ss_pred             CcccccccCCcccCcccc-ccCCCCCccceeehHHHHHHHHhCCCCCCh
Q 048419          491 PQTTHIVGTLGYLAPELT-RTGKATTSTDVYSYGILMLEVACGRRSIEP  538 (653)
Q Consensus       491 ~~~~~~~gt~~y~aPE~~-~~~~~~~ksDV~s~Gvvl~elltG~~p~~~  538 (653)
                      .......++..|++||.+ ....++.++|||+||++++||++|+.||..
T Consensus       154 ~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~  202 (225)
T smart00221      154 ALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG  202 (225)
T ss_pred             ccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence            122334677899999998 666788899999999999999999999965

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=99.95  E-value=2.9e-28  Score=250.54  Aligned_cols=286  Identities=22%  Similarity=0.231  Sum_probs=218.7

Q ss_pred             hhhhHhhhcCCcccCHHHHHHhhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcC-
Q 048419          307 MLEDWEIQCGARRFKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLR-  385 (653)
Q Consensus       307 ~~~~~~~~~~~~~f~~~el~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-  385 (653)
                      +.+.|....|..+..+.|+  ..++|......|+|-|++|.+|.+...|..||||++..+.. -.+.=+.|+++|++|+ 
T Consensus       411 L~DNWdDaEGYYrv~igE~--LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~-M~KtGl~EleiLkKL~~  487 (752)
T KOG0670|consen  411 LQDNWDDAEGYYRVRIGEL--LDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEV-MHKTGLKELEILKKLND  487 (752)
T ss_pred             cccCcccccceEEEehhhh--hcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchH-HhhhhhHHHHHHHHhhc
Confidence            4456777667666666665  56889999999999999999999998899999999976532 2344468999999995 


Q ss_pred             -----CCceeeeeeeecccceeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecC
Q 048419          386 -----HRNLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRD  460 (653)
Q Consensus       386 -----H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~D  460 (653)
                           --|.++++-.|...+++|||+|-+ ..+|.+.|...+.  .-.|........+.|+.-||..|-.   .+|+|.|
T Consensus       488 AD~Edk~Hclrl~r~F~hknHLClVFE~L-slNLRevLKKyG~--nvGL~ikaVRsYaqQLflALklLK~---c~vlHaD  561 (752)
T KOG0670|consen  488 ADPEDKFHCLRLFRHFKHKNHLCLVFEPL-SLNLREVLKKYGR--NVGLHIKAVRSYAQQLFLALKLLKK---CGVLHAD  561 (752)
T ss_pred             cCchhhhHHHHHHHHhhhcceeEEEehhh-hchHHHHHHHhCc--ccceeehHHHHHHHHHHHHHHHHHh---cCeeecc
Confidence                 347999999999999999999988 4599999988764  3457888999999999999999999   8999999


Q ss_pred             CCCCcEEEcCC-CcEEEEeecCcccccCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChh
Q 048419          461 VKPSNILLDTY-LNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQ  539 (653)
Q Consensus       461 lkp~NIll~~~-~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~  539 (653)
                      |||.|||+++. ..+||||||.|.....   ...+.+.-+..|.|||++.+..|+...|+||.||+||||.||+..|.+.
T Consensus       562 IKPDNiLVNE~k~iLKLCDfGSA~~~~e---neitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~  638 (752)
T KOG0670|consen  562 IKPDNILVNESKNILKLCDFGSASFASE---NEITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGR  638 (752)
T ss_pred             cCccceEeccCcceeeeccCcccccccc---ccccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCC
Confidence            99999999765 4589999999986543   2344455567899999999999999999999999999999999888766


Q ss_pred             hhhhHHHHHHHHHhh-----hcccch---------------------------hHhhhh------cc------CcCCHHH
Q 048419          540 KAAAELLLVDWVKEL-----HLEGEI---------------------------TQAIDQ------TL------DYYDLAE  575 (653)
Q Consensus       540 ~~~~~~~l~~~~~~~-----~~~~~~---------------------------~~~~d~------~l------~~~~~~~  575 (653)
                      .+...+.+.--+...     ...+..                           ...+.|      .|      ..-....
T Consensus       639 TNN~MLrl~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~  718 (752)
T KOG0670|consen  639 TNNQMLRLFMELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKI  718 (752)
T ss_pred             CcHHHHHHHHHhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHH
Confidence            543332221111100     000000                           000001      11      1112234


Q ss_pred             HHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          576 AELVLNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       576 ~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                      ...+.+|+-.|+..||++|.|..|.+++-
T Consensus       719 ~~~~rdLLdkml~LdP~KRit~nqAL~Hp  747 (752)
T KOG0670|consen  719 VQQLRDLLDKMLILDPEKRITVNQALKHP  747 (752)
T ss_pred             HHHHHHHHHHHhccChhhcCCHHHHhcCC
Confidence            56789999999999999999999998764

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.95  E-value=6e-27  Score=240.02  Aligned_cols=133  Identities=25%  Similarity=0.333  Sum_probs=114.7

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcC-----C---Cceeeeeeeeccc--
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLR-----H---RNLVQLHGWCRKQ--  399 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----H---~niv~l~g~~~~~--  399 (653)
                      .+|...++||.|-|++||++.+....+.||+|+.+ ......+.-+.||++|++++     |   .+||+|++.|...  
T Consensus        78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvK-SAqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGp  156 (590)
T KOG1290|consen   78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVK-SAQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGP  156 (590)
T ss_pred             ceEEEEEeccccccceeEEEeeccCCeEEEEEEEe-hhhHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCC
Confidence            67889999999999999999999999999999984 33344566789999999984     3   3699999998654  


Q ss_pred             --ceeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEc
Q 048419          400 --DELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLD  469 (653)
Q Consensus       400 --~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~  469 (653)
                        .++|+|+|+. |.+|..+|....   .+.++.....+|++||+.||.|||.+  .+|||-||||+||||.
T Consensus       157 NG~HVCMVfEvL-GdnLLklI~~s~---YrGlpl~~VK~I~~qvL~GLdYLH~e--cgIIHTDlKPENvLl~  222 (590)
T KOG1290|consen  157 NGQHVCMVFEVL-GDNLLKLIKYSN---YRGLPLSCVKEICRQVLTGLDYLHRE--CGIIHTDLKPENVLLC  222 (590)
T ss_pred             CCcEEEEEehhh-hhHHHHHHHHhC---CCCCcHHHHHHHHHHHHHHHHHHHHh--cCccccCCCcceeeee
Confidence              4899999999 778999987754   45689999999999999999999997  5999999999999994

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=99.95  E-value=9.3e-28  Score=223.97  Aligned_cols=260  Identities=20%  Similarity=0.294  Sum_probs=197.6

Q ss_pred             hcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcC-CCceeeeeeeecccc--eeEEE
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLR-HRNLVQLHGWCRKQD--ELLLV  405 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~--~~~lV  405 (653)
                      .++|++.+.+|+|-++.||.|..-.+++.++||.++...   .+.+.+|+.+|..|+ ||||+++++...+..  ...||
T Consensus        37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk---kkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLi  113 (338)
T KOG0668|consen   37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVK---KKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLI  113 (338)
T ss_pred             cchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHH---HHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhH
Confidence            467888999999999999999988889999999996543   467889999999997 999999999987764  57899


Q ss_pred             EeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCC-CcEEEEeecCccc
Q 048419          406 YDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTY-LNAKLGDFGLAKI  484 (653)
Q Consensus       406 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~-~~~kl~DfGla~~  484 (653)
                      +||+.+.+...+.        ..|+...+...+.+++.||.|+|+   .||.|||+||.|+++|.. -.++|+|+|+|.+
T Consensus       114 FE~v~n~Dfk~ly--------~tl~d~dIryY~~elLkALdyCHS---~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEF  182 (338)
T KOG0668|consen  114 FEYVNNTDFKQLY--------PTLTDYDIRYYIYELLKALDYCHS---MGIMHRDVKPHNVMIDHELRKLRLIDWGLAEF  182 (338)
T ss_pred             hhhhccccHHHHh--------hhhchhhHHHHHHHHHHHHhHHHh---cCcccccCCcceeeechhhceeeeeecchHhh
Confidence            9999887765543        337778888999999999999999   999999999999999865 5699999999998


Q ss_pred             ccCCCCCcccccccCCcccCcccccc-CCCCCccceeehHHHHHHHHhCCCCCChhh-hhhHHH----------HHHHHH
Q 048419          485 YEHGANPQTTHIVGTLGYLAPELTRT-GKATTSTDVYSYGILMLEVACGRRSIEPQK-AAAELL----------LVDWVK  552 (653)
Q Consensus       485 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDV~s~Gvvl~elltG~~p~~~~~-~~~~~~----------l~~~~~  552 (653)
                      +..+....  -.+.+..|--||.+-. ..++..-|+|||||+|..|+..+.||-... +.+++.          +..++.
T Consensus       183 YHp~~eYn--VRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~  260 (338)
T KOG0668|consen  183 YHPGKEYN--VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLN  260 (338)
T ss_pred             cCCCceee--eeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHH
Confidence            86554322  2356778889998865 457889999999999999999999986432 222221          222332


Q ss_pred             hhh--cccchhHhhhhcc----CcC-----CHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          553 ELH--LEGEITQAIDQTL----DYY-----DLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       553 ~~~--~~~~~~~~~d~~l----~~~-----~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                      +..  .......++...-    ..+     ..-...++++++-+.|..|..+|||++|.+.+-
T Consensus       261 KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~Hp  323 (338)
T KOG0668|consen  261 KYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAHP  323 (338)
T ss_pred             HHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcCc
Confidence            221  1112222221111    000     001136788999999999999999999998754

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=99.95  E-value=4.6e-28  Score=252.15  Aligned_cols=196  Identities=25%  Similarity=0.346  Sum_probs=170.3

Q ss_pred             CcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCch---hh-----HHHHHHHHHHHhhcC---CCceeeeeeeeccc
Q 048419          331 GFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQ---QG-----MKEFVAEIMSMGRLR---HRNLVQLHGWCRKQ  399 (653)
Q Consensus       331 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~---~~-----~~~~~~E~~~l~~l~---H~niv~l~g~~~~~  399 (653)
                      .|...+.+|+|+||.|+.|.++.+..+|+||.+.+..-   .+     .-..-.|+++|..|+   |+||++++++|++.
T Consensus       562 ~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEdd  641 (772)
T KOG1152|consen  562 DYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFEDD  641 (772)
T ss_pred             cceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeecC
Confidence            47778999999999999999999999999999865421   11     123456999999997   99999999999999


Q ss_pred             ceeEEEEecc-CCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEe
Q 048419          400 DELLLVYDYV-PNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGD  478 (653)
Q Consensus       400 ~~~~lV~E~~-~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D  478 (653)
                      +.+||+||-. ++-+|.+++..+.     .+++.+.--|++||+.|+++||+   ++|||||||-+||.++++|-+||+|
T Consensus       642 d~yyl~te~hg~gIDLFd~IE~kp-----~m~E~eAk~IFkQV~agi~hlh~---~~ivhrdikdenvivd~~g~~klid  713 (772)
T KOG1152|consen  642 DYYYLETEVHGEGIDLFDFIEFKP-----RMDEPEAKLIFKQVVAGIKHLHD---QGIVHRDIKDENVIVDSNGFVKLID  713 (772)
T ss_pred             CeeEEEecCCCCCcchhhhhhccC-----ccchHHHHHHHHHHHhccccccc---cCceecccccccEEEecCCeEEEee
Confidence            9999999975 5678999997654     48999999999999999999999   9999999999999999999999999


Q ss_pred             ecCcccccCCCCCcccccccCCcccCccccccCCC-CCccceeehHHHHHHHHhCCCCCC
Q 048419          479 FGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKA-TTSTDVYSYGILMLEVACGRRSIE  537 (653)
Q Consensus       479 fGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~ksDV~s~Gvvl~elltG~~p~~  537 (653)
                      ||.+.....+.   ....+||.+|.|||++.+.+| ...-|||++|++||.++....||.
T Consensus       714 fgsaa~~ksgp---fd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy  770 (772)
T KOG1152|consen  714 FGSAAYTKSGP---FDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY  770 (772)
T ss_pred             ccchhhhcCCC---cceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence            99998765543   344689999999999998876 457899999999999999988875

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=99.94  E-value=4.3e-28  Score=256.34  Aligned_cols=253  Identities=26%  Similarity=0.348  Sum_probs=206.6

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEecc
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYV  409 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~  409 (653)
                      ++|.....+|.|.+|.|||+++..+++..|+|.++........-..+|+-+++..+|+||+.++|.+...+.++++||||
T Consensus        15 ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEyc   94 (829)
T KOG0576|consen   15 DDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEYC   94 (829)
T ss_pred             cchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEec
Confidence            56777899999999999999999999999999998887778888899999999999999999999999999999999999


Q ss_pred             CCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCC
Q 048419          410 PNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGA  489 (653)
Q Consensus       410 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~  489 (653)
                      .+|+|.+.-+-..     +|++.++..+++..++||+|||+   .+-+|||||-.||++++.+.+|++|||.+..+... 
T Consensus        95 gggslQdiy~~Tg-----plselqiayvcRetl~gl~ylhs---~gk~hRdiKGanilltd~gDvklaDfgvsaqitat-  165 (829)
T KOG0576|consen   95 GGGSLQDIYHVTG-----PLSELQIAYVCRETLQGLKYLHS---QGKIHRDIKGANILLTDEGDVKLADFGVSAQITAT-  165 (829)
T ss_pred             CCCcccceeeecc-----cchhHHHHHHHhhhhccchhhhc---CCcccccccccceeecccCceeecccCchhhhhhh-
Confidence            9999999876643     59999999999999999999999   89999999999999999999999999998765432 


Q ss_pred             CCcccccccCCcccCcccc---ccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhh
Q 048419          490 NPQTTHIVGTLGYLAPELT---RTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQ  566 (653)
Q Consensus       490 ~~~~~~~~gt~~y~aPE~~---~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  566 (653)
                      ........||+.|||||+.   ..+.|..++|||+.|+...|+--...|.....+.....+.  -...+..        +
T Consensus       166 i~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~Lm--TkS~~qp--------p  235 (829)
T KOG0576|consen  166 IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLM--TKSGFQP--------P  235 (829)
T ss_pred             hhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHh--hccCCCC--------C
Confidence            2233456899999999976   3567899999999999999998888776543332211110  0111111        1


Q ss_pred             ccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 048419          567 TLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVE  602 (653)
Q Consensus       567 ~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~  602 (653)
                      .++ -...-.+.+-++++.|+-.+|.+||++..+++
T Consensus       236 ~lk-Dk~kws~~fh~fvK~altknpKkRptaeklL~  270 (829)
T KOG0576|consen  236 TLK-DKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQ  270 (829)
T ss_pred             ccc-CCccchHHHHHHHHHHhcCCCccCCChhhhee
Confidence            111 01112456889999999999999999987765

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=99.94  E-value=2.1e-27  Score=232.22  Aligned_cols=264  Identities=23%  Similarity=0.263  Sum_probs=198.1

Q ss_pred             hhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC--chhhHHHHHHHHHHHhhcCCCceeeeeeeecccc-----
Q 048419          328 VTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQD-----  400 (653)
Q Consensus       328 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~-----  400 (653)
                      ...+|...+.+|.|.- .|..+.+.-.++.||+|++...  .....+...+|...+..++|+|+++++.++.-..     
T Consensus        15 v~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~   93 (369)
T KOG0665|consen   15 VPKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEF   93 (369)
T ss_pred             eeeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHH
Confidence            3456777788898888 7777777777899999998543  2334567788999999999999999999885443     


Q ss_pred             -eeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEee
Q 048419          401 -ELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDF  479 (653)
Q Consensus       401 -~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df  479 (653)
                       +.|+|||+| ..+|...+...       ++=+.+..|+.|++.|++|||+   .+|+||||||+||++..+..+||.||
T Consensus        94 ~e~y~v~e~m-~~nl~~vi~~e-------lDH~tis~i~yq~~~~ik~lhs---~~IihRdLkPsnivv~~~~~lKi~df  162 (369)
T KOG0665|consen   94 QEVYLVMELM-DANLCQVILME-------LDHETISYILYQMLCGIKHLHS---AGIIHRDLKPSNIVVNSDCTLKILDF  162 (369)
T ss_pred             HhHHHHHHhh-hhHHHHHHHHh-------cchHHHHHHHHHHHHHHHHHHh---cceeecccCcccceecchhheeeccc
Confidence             579999999 45888877622       4556677899999999999999   99999999999999999999999999


Q ss_pred             cCcccccCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHH------------
Q 048419          480 GLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLL------------  547 (653)
Q Consensus       480 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l------------  547 (653)
                      |+++.....  -..+..+.|..|.|||++-+..+.+.+||||.||++.||++|+.-|.+.+.-+....            
T Consensus       163 g~ar~e~~~--~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F  240 (369)
T KOG0665|consen  163 GLARTEDTD--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSF  240 (369)
T ss_pred             hhhcccCcc--cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHH
Confidence            999865432  345667889999999999888899999999999999999999987765443221110            


Q ss_pred             ----HHHHHhh------hcccchhHhhhhcc----CcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          548 ----VDWVKEL------HLEGEITQAIDQTL----DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       548 ----~~~~~~~------~~~~~~~~~~d~~l----~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                          ..-++..      +..-...+.+...+    .+.+......+.+++.+||-.||++|-++++++++--
T Consensus       241 ~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HPY  312 (369)
T KOG0665|consen  241 MKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHPY  312 (369)
T ss_pred             HHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCCe
Confidence                0000000      00011111111111    0111123456889999999999999999999999764

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=99.94  E-value=3.7e-27  Score=225.19  Aligned_cols=254  Identities=20%  Similarity=0.297  Sum_probs=189.1

Q ss_pred             hhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhc-CCCceeeeeee-ecccceeEEE
Q 048419          328 VTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRL-RHRNLVQLHGW-CRKQDELLLV  405 (653)
Q Consensus       328 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~-~~~~~~~~lV  405 (653)
                      ..+.|.+.+.||+|.||.+-++.++.+.+.+++|-+.... -..++|.+|...--.| .|.||+.-++. +...+.++++
T Consensus        22 l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~-tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~  100 (378)
T KOG1345|consen   22 LEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ-TTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFV  100 (378)
T ss_pred             hhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcch-hhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEe
Confidence            3456888999999999999999999999999999985442 2357888888655555 48999987764 5666788899


Q ss_pred             EeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEE-cC-CCcEEEEeecCcc
Q 048419          406 YDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILL-DT-YLNAKLGDFGLAK  483 (653)
Q Consensus       406 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll-~~-~~~~kl~DfGla~  483 (653)
                      +||+|.|+|.+-+...+      +-+..-.+++.|+++||.|||+   +++||||||.+|||+ +. ..++||||||+.+
T Consensus       101 qE~aP~gdL~snv~~~G------igE~~~K~v~~ql~SAi~fMHs---knlVHRdlK~eNiLif~~df~rvKlcDFG~t~  171 (378)
T KOG1345|consen  101 QEFAPRGDLRSNVEAAG------IGEANTKKVFAQLLSAIEFMHS---KNLVHRDLKAENILIFDADFYRVKLCDFGLTR  171 (378)
T ss_pred             eccCccchhhhhcCccc------ccHHHHHHHHHHHHHHHHHhhc---cchhhcccccceEEEecCCccEEEeeeccccc
Confidence            99999999998886643      5666677899999999999999   999999999999999 43 4479999999987


Q ss_pred             cccCCCCCcccccccCCcccCccccccC-----CCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhccc
Q 048419          484 IYEHGANPQTTHIVGTLGYLAPELTRTG-----KATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEG  558 (653)
Q Consensus       484 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~  558 (653)
                      ..+..    ......+..|.+||.....     ...+.+|||+||++++..+||+.||+.....+ ....+  +..+..+
T Consensus       172 k~g~t----V~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d-~~Y~~--~~~w~~r  244 (378)
T KOG1345|consen  172 KVGTT----VKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMD-KPYWE--WEQWLKR  244 (378)
T ss_pred             ccCce----ehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccC-chHHH--HHHHhcc
Confidence            54321    2223446689999976432     36789999999999999999999998433222 22223  3333333


Q ss_pred             chhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 048419          559 EITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEF  603 (653)
Q Consensus       559 ~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  603 (653)
                      ......+. ..    ...+.++++-.+-+.++|++|-...++.++
T Consensus       245 k~~~~P~~-F~----~fs~~a~r~Fkk~lt~~~~drcki~~~kk~  284 (378)
T KOG1345|consen  245 KNPALPKK-FN----PFSEKALRLFKKSLTPRFKDRCKIWTAKKM  284 (378)
T ss_pred             cCccCchh-hc----ccCHHHHHHHHHhcCCcccccchhHHHHHH
Confidence            33322111 01    123567788888999999999665555543

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.93  E-value=2.3e-26  Score=269.72  Aligned_cols=198  Identities=19%  Similarity=0.277  Sum_probs=141.6

Q ss_pred             hcCC-Cceeeeeeee-------cccceeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCC
Q 048419          383 RLRH-RNLVQLHGWC-------RKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQ  454 (653)
Q Consensus       383 ~l~H-~niv~l~g~~-------~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~  454 (653)
                      .++| +||++++++|       .+.+.+++++||+ +++|.++|...    ...+++.+++.++.||++||.|||+   +
T Consensus        28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~al~~lH~---~   99 (793)
T PLN00181         28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNP----DRSVDAFECFHVFRQIVEIVNAAHS---Q   99 (793)
T ss_pred             hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcc----cccccHHHHHHHHHHHHHHHHHHHh---C
Confidence            4566 6888888887       2334577889988 56999999653    2458999999999999999999999   9


Q ss_pred             CeEecCCCCCcEEEcCC-------------------CcEEEEeecCcccccCCCC---------------CcccccccCC
Q 048419          455 RVVHRDVKPSNILLDTY-------------------LNAKLGDFGLAKIYEHGAN---------------PQTTHIVGTL  500 (653)
Q Consensus       455 ~ivH~Dlkp~NIll~~~-------------------~~~kl~DfGla~~~~~~~~---------------~~~~~~~gt~  500 (653)
                      +|+||||||+||||+..                   +.+|++|||+++.......               .......||+
T Consensus       100 gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~  179 (793)
T PLN00181        100 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMS  179 (793)
T ss_pred             CeeeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCc
Confidence            99999999999999654                   4455666666653211000               0011235788


Q ss_pred             cccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhccCcCCHHHHHHHH
Q 048419          501 GYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYYDLAEAELVL  580 (653)
Q Consensus       501 ~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~  580 (653)
                      .|+|||++.+..++.++|||||||+||||++|..|+......    +......         .+.+.    .........
T Consensus       180 ~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~~----~~~~~~~---------~~~~~----~~~~~~~~~  242 (793)
T PLN00181        180 WYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSRT----MSSLRHR---------VLPPQ----ILLNWPKEA  242 (793)
T ss_pred             ceEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHHH----HHHHHHh---------hcChh----hhhcCHHHH
Confidence            999999999999999999999999999999998886532211    1001000         00010    011223456


Q ss_pred             HHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          581 NLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       581 ~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                      .++.+||+++|.+||+|.|++++..
T Consensus       243 ~~~~~~L~~~P~~Rps~~eil~h~~  267 (793)
T PLN00181        243 SFCLWLLHPEPSCRPSMSELLQSEF  267 (793)
T ss_pred             HHHHHhCCCChhhCcChHHHhhchh
Confidence            7888999999999999999998654

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=99.92  E-value=2.3e-25  Score=225.88  Aligned_cols=269  Identities=25%  Similarity=0.371  Sum_probs=199.7

Q ss_pred             HHHhhcCcCcceeeeeeCcEEEEEEEeCC---CCcEEEEEEeccCchhhHHHHHHHHHHHhhcC-CCceeeeeeeecccc
Q 048419          325 LASVTKGFGEQNLVGSGGFGRVYRGLMPS---LGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLR-HRNLVQLHGWCRKQD  400 (653)
Q Consensus       325 l~~at~~f~~~~~LG~G~fg~Vy~~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~  400 (653)
                      +....+.|...++||+|.|++||++.+..   .+..||+|.+...+.  -....+|+++|..+. +.||+++.+++..++
T Consensus        31 ~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~--p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd  108 (418)
T KOG1167|consen   31 IPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSS--PSRILNELEMLYRLGGSDNIIKLNGCFRNND  108 (418)
T ss_pred             hhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccC--chHHHHHHHHHHHhccchhhhcchhhhccCC
Confidence            44566778889999999999999999876   678999999865532  345789999999995 999999999999999


Q ss_pred             eeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcC-CCcEEEEee
Q 048419          401 ELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDT-YLNAKLGDF  479 (653)
Q Consensus       401 ~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~-~~~~kl~Df  479 (653)
                      ..++|+||++.....+++..        ++..++...+..+..||.++|.   +|||||||||+|+|.+. -+.-.|.||
T Consensus       109 ~v~ivlp~~~H~~f~~l~~~--------l~~~~i~~Yl~~ll~Al~~~h~---~GIvHRDiKpsNFL~n~~t~rg~LvDF  177 (418)
T KOG1167|consen  109 QVAIVLPYFEHDRFRDLYRS--------LSLAEIRWYLRNLLKALAHLHK---NGIVHRDIKPSNFLYNRRTQRGVLVDF  177 (418)
T ss_pred             eeEEEecccCccCHHHHHhc--------CCHHHHHHHHHHHHHHhhhhhc---cCccccCCCccccccccccCCceEEec
Confidence            99999999999888888754        5677888899999999999999   99999999999999965 466899999


Q ss_pred             cCcccccCC--------------CC-----------------------------CcccccccCCcccCcccccc-CCCCC
Q 048419          480 GLAKIYEHG--------------AN-----------------------------PQTTHIVGTLGYLAPELTRT-GKATT  515 (653)
Q Consensus       480 Gla~~~~~~--------------~~-----------------------------~~~~~~~gt~~y~aPE~~~~-~~~~~  515 (653)
                      |+|...+..              ..                             .......||+||.|||++.. ..-+.
T Consensus       178 gLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~Qtt  257 (418)
T KOG1167|consen  178 GLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTT  257 (418)
T ss_pred             hhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCC
Confidence            999721100              00                             01113469999999998754 45788


Q ss_pred             ccceeehHHHHHHHHhCCCCCChhhhhhHHH--HH-----HHHHh-hhcccc--h---------hHhhh-------hcc-
Q 048419          516 STDVYSYGILMLEVACGRRSIEPQKAAAELL--LV-----DWVKE-LHLEGE--I---------TQAID-------QTL-  568 (653)
Q Consensus       516 ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~--l~-----~~~~~-~~~~~~--~---------~~~~d-------~~l-  568 (653)
                      +.||||.||+++-+++++.||-....+.+..  +.     .-+++ ....|.  +         .+...       ..+ 
T Consensus       258 aiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~  337 (418)
T KOG1167|consen  258 AIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIY  337 (418)
T ss_pred             ccceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcc
Confidence            9999999999999999999987544322110  00     01111 111122  1         11100       000 


Q ss_pred             C-cC--------CHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          569 D-YY--------DLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       569 ~-~~--------~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                      . ..        .......++++..+|+..||.+|.|+++.+++--.
T Consensus       338 ~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF  384 (418)
T KOG1167|consen  338 KSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPFF  384 (418)
T ss_pred             cccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCcCC
Confidence            0 00        01112478999999999999999999999987643

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.91  E-value=1.6e-24  Score=206.92  Aligned_cols=166  Identities=19%  Similarity=0.159  Sum_probs=125.1

Q ss_pred             CCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCCCC
Q 048419          412 GSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANP  491 (653)
Q Consensus       412 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~  491 (653)
                      |+|.+++...    +..++|.+++.++.||++||.|||+   ++      ||+|||++.++.+|+  ||+++......  
T Consensus         1 GsL~~~l~~~----~~~l~~~~~~~i~~qi~~~L~~lH~---~~------kp~Nil~~~~~~~~~--fG~~~~~~~~~--   63 (176)
T smart00750        1 VSLADILEVR----GRPLNEEEIWAVCLQCLRALRELHR---QA------KSGNILLTWDGLLKL--DGSVAFKTPEQ--   63 (176)
T ss_pred             CcHHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHh---cC------CcccEeEcCccceee--ccceEeecccc--
Confidence            6889998754    2459999999999999999999999   55      999999999999999  99998654322  


Q ss_pred             cccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhccCcC
Q 048419          492 QTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYY  571 (653)
Q Consensus       492 ~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~  571 (653)
                          ..|++.|+|||++.+..++.++|||||||++|||++|+.||........ .+..+..... ..      ++.....
T Consensus        64 ----~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~-~~~~~~~~~~-~~------~~~~~~~  131 (176)
T smart00750       64 ----SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSA-ILEILLNGMP-AD------DPRDRSN  131 (176)
T ss_pred             ----CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcH-HHHHHHHHhc-cC------Ccccccc
Confidence                2588999999999999999999999999999999999999975432111 1111111110 00      0000001


Q ss_pred             CHHHH--HHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          572 DLAEA--ELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       572 ~~~~~--~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                      .....  ..+.+++.+||+.+|.+||++.|+++++..
T Consensus       132 ~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~  168 (176)
T smart00750      132 LESVSAARSFADFMRVCASRLPQRREAANHYLAHCRA  168 (176)
T ss_pred             HHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHH
Confidence            11122  268999999999999999999999998853

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.90  E-value=2.7e-23  Score=217.94  Aligned_cols=179  Identities=18%  Similarity=0.221  Sum_probs=136.9

Q ss_pred             HHHHhhcCcCcceeeeeeCcEEEEEEEeCC-CCcEEEEEEeccC-----chhhHHHHHHHHHHHhhcCCCceeeeeeeec
Q 048419          324 ELASVTKGFGEQNLVGSGGFGRVYRGLMPS-LGLEVAIKRIGHN-----SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR  397 (653)
Q Consensus       324 el~~at~~f~~~~~LG~G~fg~Vy~~~~~~-~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~  397 (653)
                      .+..+.++|...+.||+|+||+||+|.+.. +++.+|||++...     .....+.+.+|+++|++++|+|+++.+..+ 
T Consensus        12 ~~~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~-   90 (365)
T PRK09188         12 QIPALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT-   90 (365)
T ss_pred             ccccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc-
Confidence            345566789999999999999999998865 6778899987532     122356789999999999999998533222 


Q ss_pred             ccceeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCC-CCCcEEEcCCCcEEE
Q 048419          398 KQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDV-KPSNILLDTYLNAKL  476 (653)
Q Consensus       398 ~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dl-kp~NIll~~~~~~kl  476 (653)
                        +..++||||+++++|... ...     .      ...++.|++++|.|||+   ++|+|||| ||+|||++.++++||
T Consensus        91 --~~~~LVmE~~~G~~L~~~-~~~-----~------~~~~~~~i~~aL~~lH~---~gIiHrDL~KP~NILv~~~~~ikL  153 (365)
T PRK09188         91 --GKDGLVRGWTEGVPLHLA-RPH-----G------DPAWFRSAHRALRDLHR---AGITHNDLAKPQNWLMGPDGEAAV  153 (365)
T ss_pred             --CCcEEEEEccCCCCHHHh-Ccc-----c------hHHHHHHHHHHHHHHHH---CCCeeCCCCCcceEEEcCCCCEEE
Confidence              457999999999999632 110     0      14678899999999999   99999999 999999999999999


Q ss_pred             EeecCcccccCCCC-------CcccccccCCcccCccccccCC------CCCcccee
Q 048419          477 GDFGLAKIYEHGAN-------PQTTHIVGTLGYLAPELTRTGK------ATTSTDVY  520 (653)
Q Consensus       477 ~DfGla~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~------~~~ksDV~  520 (653)
                      +|||+++.+.....       ...+...+++.|+|||++...+      .+..+|-|
T Consensus       154 iDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~~dgW  210 (365)
T PRK09188        154 IDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPRERKILARKSLPSRIW  210 (365)
T ss_pred             EECccceecccCcchhhhhhhhhhhhhhccCccCCcccCChhhhccccccccccCcE
Confidence            99999997654321       1123456888999999886432      23346666

>cd07308 lectin_leg-like legume-like lectins: ERGIC-53, ERGL, VIP36, VIPL, EMP46, and EMP47

Probab=99.88  E-value=3.4e-21  Score=190.12  Aligned_cols=195  Identities=20%  Similarity=0.245  Sum_probs=134.5

Q ss_pred             CCeEEecceEecCCCcEEecCCCCCceEEEEcCCCeecccCCCCceeeeEEEEEEEEecCCCCCCCCceEEEEecCCCCC
Q 048419           19 ANLSLEGAAYISTSGILTVTNKSEGLIGHALYPNPLRFKTSNKSVAIDFRTNFVFSILPKYPDLGGQGLAFIIISTNRPE   98 (653)
Q Consensus        19 ~~l~~~g~a~~~~~g~l~Lt~~~~~~~Gr~~y~~pi~~~~~~~~~~~sF~t~F~f~i~~~~~~~~gdGlaF~l~~~~~~~   98 (653)
                      .++.+.|+|.+. ++.|+||++..++.|++||+.|+++        ++|+|+|+|+|.... ..+||||||+++|.... 
T Consensus        20 ~~w~~~G~a~~~-~~~i~LT~~~~~~~G~~~~~~pi~~--------~~F~~~f~F~i~~~~-~~~gdG~af~~~~~~~~-   88 (218)
T cd07308          20 GNWTVGGSTVIT-KNYIRLTPDVPSQSGSLWSRVPIPA--------KDFEIEVEFSIHGGS-GLGGDGFAFWYTEEPGS-   88 (218)
T ss_pred             CCeEEcCCeEEe-CCEEEeCCCCCCCEeEEEeCCCccC--------CCEEEEEEEEEeCCC-CCCCCEEEEEEECCCCC-
Confidence            589999999997 8999999999999999999999998        489999999998753 45899999999986532 


Q ss_pred             CCCCCccccCCCcccCCCCCCCCceEEEEeecccccccCCCCCCeeeEecCC-CCcCCcccCccccCCCCccccccCC-C
Q 048419           99 NCLANQFLGLPNITMSSSTKFSTRMLAVEFDIIQNTELIDINDNHVGIDISS-LISSASEPASYYSGNNHRIPILLRS-G  176 (653)
Q Consensus        99 ~~~~g~~lG~~~~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~~~Hvgid~ns-~~s~~~~~~~~~~~~~~~~~~~l~~-g  176 (653)
                         .|+.+|..+.-         +-+||||||+.|.   +-..++|.+-+|- ..+.....-... .......+...+ +
T Consensus        89 ---~g~~~G~~~~~---------~Glai~fdt~~n~---~~~~p~i~~~~Ndg~~~~~~~~d~~~-~~~~~c~~~~~~~~  152 (218)
T cd07308          89 ---DGPLFGGPDKF---------KGLAIFFDTYDND---GKGFPSISVFLNDGTKSYDYETDGEK-LELASCSLKFRNSN  152 (218)
T ss_pred             ---CCcccccCCCC---------CEEEEEEEcCCCC---CCCCCeEEEEEeCCCceecccCCCcc-ccccceeEecccCC
Confidence               34456664432         2399999999985   3344566554432 111100000000 000012223332 6


Q ss_pred             CceEEEEEecCCceEEEEEEeeCCCCCCCCCceeeeecCCcccccceEEeEecccCcccceeeecceeee
Q 048419          177 DPIQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLITASHNVHGWSIS  246 (653)
Q Consensus       177 ~~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~~l~~~~dL~~~l~~~~~vGFsastg~~~~~~~i~sWsf~  246 (653)
                      .+++++|.|+  .+.|.|.+.....   .....-..++.. .+|+.+|+||||+||...+.|.|++|.+.
T Consensus       153 ~~~~~~I~y~--~~~l~v~i~~~~~---~~~~~c~~~~~~-~l~~~~y~G~sA~tg~~~d~~dIls~~~~  216 (218)
T cd07308         153 APTTLRISYL--NNTLKVDITYSEG---NNWKECFTVEDV-ILPSQGYFGFSAQTGDLSDNHDILSVHTY  216 (218)
T ss_pred             CCeEEEEEEE--CCEEEEEEeCCCC---CCccEEEEcCCc-ccCCCCEEEEEeccCCCcCcEEEEEEEee
Confidence            8999999999  6788888864321   111222222221 46789999999999999999999999874

The legume-like (leg-like) lectins are eukaryotic intracellular sugar transport proteins with a carbohydrate recognition domain similar to that of the legume lectins. This domain binds high-mannose-type oligosaccharides for transport from the endoplasmic reticulum to the Golgi complex. These leg-like lectins include ERGIC-53, ERGL, VIP36, VIPL, EMP46, EMP47, and the UIP5 (ULP1-interacting protein 5) precursor protein. Leg-like lectins have different intracellular distributions and dynamics in the endoplasmic reticulum-Golgi system of the secretory pathway and interact with N-glycans of glycoproteins in a calcium-dependent manner, suggesting a role in glycoprotein sorting and trafficking. L-type lectins have a dome-shaped beta-barrel carbohydrate recognition domain with a curved seven-stranded beta-sheet referred to as the "front face" and a flat six-stranded beta-sheet referred to as the "ba

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.88  E-value=1.3e-21  Score=205.26  Aligned_cols=258  Identities=21%  Similarity=0.226  Sum_probs=192.2

Q ss_pred             CcCcceeeeeeCcEEEEEEEeCCCC-cEEEEEEeccCchhhHHHHHHHHHHHhhcCC----Cceeeeeeee-cccceeEE
Q 048419          331 GFGEQNLVGSGGFGRVYRGLMPSLG-LEVAIKRIGHNSQQGMKEFVAEIMSMGRLRH----RNLVQLHGWC-RKQDELLL  404 (653)
Q Consensus       331 ~f~~~~~LG~G~fg~Vy~~~~~~~~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H----~niv~l~g~~-~~~~~~~l  404 (653)
                      +|...+.||+|+||.||++.....+ ..+|+|............+..|+.++..+..    +++..+++.. ......++
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i   98 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI   98 (322)
T ss_pred             ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence            7889999999999999999987654 5788888765433322267788888888863    6888888888 47778899


Q ss_pred             EEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCC-----CcEEEEee
Q 048419          405 VYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTY-----LNAKLGDF  479 (653)
Q Consensus       405 V~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~-----~~~kl~Df  479 (653)
                      ||+.+ |.+|.++.....   ...++....++|+.|++.+|++||+   .|++||||||.|+++...     ..+.|.||
T Consensus        99 VM~l~-G~sL~dl~~~~~---~~~fs~~T~l~ia~q~l~~l~~lH~---~G~iHRDiKp~N~~~g~~~~~~~~~~~llDf  171 (322)
T KOG1164|consen   99 VMSLL-GPSLEDLRKRNP---PGRFSRKTVLRIAIQNLNALEDLHS---KGFIHRDIKPENFVVGQSSRSEVRTLYLLDF  171 (322)
T ss_pred             EEecc-CccHHHHHHhCC---CCCcCHhHHHHHHHHHHHHHHHHHh---cCcccCCcCHHHeeecCCCCcccceEEEEec
Confidence            99988 889999876554   3568899999999999999999999   999999999999999654     46999999


Q ss_pred             cCcc--cccCCCC-----C-c-ccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHH
Q 048419          480 GLAK--IYEHGAN-----P-Q-TTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDW  550 (653)
Q Consensus       480 Gla~--~~~~~~~-----~-~-~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~  550 (653)
                      |+++  .+.....     . . .....||..|++++...+...+.+.|+||++.++.|+..|..||...........   
T Consensus       172 Glar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~---  248 (322)
T KOG1164|consen  172 GLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSK---  248 (322)
T ss_pred             CCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHHH---
Confidence            9998  3211111     1 1 2335699999999999999999999999999999999999999975443221110   


Q ss_pred             HHhhhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          551 VKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       551 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                      +.....    ...... +   .......+.++...+-..+..++|....+...|..
T Consensus       249 ~~~~~~----~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~  296 (322)
T KOG1164|consen  249 FEKDPR----KLLTDR-F---GDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKD  296 (322)
T ss_pred             HHHHhh----hhcccc-c---cCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHH
Confidence            000000    000000 1   11123445555555666899999999999888743

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.86  E-value=1.9e-20  Score=194.60  Aligned_cols=260  Identities=30%  Similarity=0.422  Sum_probs=197.6

Q ss_pred             cCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchh---hHHHHHHHHHHHhhcCCC-ceeeeeeeecccceeEEEEe
Q 048419          332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQ---GMKEFVAEIMSMGRLRHR-NLVQLHGWCRKQDELLLVYD  407 (653)
Q Consensus       332 f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~H~-niv~l~g~~~~~~~~~lV~E  407 (653)
                      |...+.||.|+||.||++...   ..+++|.+......   ....+.+|+..+..+.|+ +++++.+.+......+++++
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~   78 (384)
T COG0515           2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVME   78 (384)
T ss_pred             ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEe
Confidence            566789999999999999986   78999998655322   467899999999999988 79999999977777899999


Q ss_pred             ccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCC-cEEEEeecCccccc
Q 048419          408 YVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYL-NAKLGDFGLAKIYE  486 (653)
Q Consensus       408 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~-~~kl~DfGla~~~~  486 (653)
                      ++.+++|.+++......  ..+.......+..|++.++.|+|+   .+++|||+||+||+++... .++++|||+++...
T Consensus        79 ~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~H~---~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~  153 (384)
T COG0515          79 YVDGGSLEDLLKKIGRK--GPLSESEALFILAQILSALEYLHS---KGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLP  153 (384)
T ss_pred             cCCCCcHHHHHHhcccc--cCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeeecCCCCeEEEeccCcceecC
Confidence            99999999666544210  257888899999999999999999   8999999999999999988 79999999998654


Q ss_pred             CCCCC-----cccccccCCcccCcccccc---CCCCCccceeehHHHHHHHHhCCCCCChhhhh-hHHHHHHHHHhhhcc
Q 048419          487 HGANP-----QTTHIVGTLGYLAPELTRT---GKATTSTDVYSYGILMLEVACGRRSIEPQKAA-AELLLVDWVKELHLE  557 (653)
Q Consensus       487 ~~~~~-----~~~~~~gt~~y~aPE~~~~---~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~-~~~~l~~~~~~~~~~  557 (653)
                      .....     ......|+..|+|||.+..   .......|+|++|++++++++|..|+...... ......+.+......
T Consensus       154 ~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~  233 (384)
T COG0515         154 DPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTP  233 (384)
T ss_pred             CCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCc
Confidence            43321     2355689999999999987   57888999999999999999999997654421 001111111111110


Q ss_pred             cchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 048419          558 GEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEF  603 (653)
Q Consensus       558 ~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  603 (653)
                       .......   ..........+.+++..|+..+|..|.++.+....
T Consensus       234 -~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~  275 (384)
T COG0515         234 -SLASPLS---PSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH  275 (384)
T ss_pred             -ccccccC---ccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence             0000000   00001223568889999999999999999988764

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.85  E-value=2e-22  Score=192.61  Aligned_cols=244  Identities=17%  Similarity=0.283  Sum_probs=186.0

Q ss_pred             eeeeeeCcEEEEEEEeCCCCcEEEEEEeccC--chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEeccCCCC
Q 048419          336 NLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGS  413 (653)
Q Consensus       336 ~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gs  413 (653)
                      .+|.+.-.|..|+|++.+  ..+++|++...  .....++|..|.-.|+...||||++++|.|.....+.++..|||.|+
T Consensus       196 tkl~e~hsgelwrgrwqg--ndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~gs  273 (448)
T KOG0195|consen  196 TKLAESHSGELWRGRWQG--NDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPFGS  273 (448)
T ss_pred             hhhccCCCcccccccccC--cchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccchH
Confidence            457888899999999975  45666766432  34445789999999999999999999999999999999999999999


Q ss_pred             chhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCCCCcc
Q 048419          414 LDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQT  493 (653)
Q Consensus       414 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~  493 (653)
                      |+..|++..   .-..+-.|..+++.+||+|++|||+.. +-|.---|.+..+++|++.+++|+= +-+++.     -+.
T Consensus       274 lynvlhe~t---~vvvd~sqav~faldiargmaflhsle-p~ipr~~lns~hvmidedltarism-ad~kfs-----fqe  343 (448)
T KOG0195|consen  274 LYNVLHEQT---SVVVDHSQAVRFALDIARGMAFLHSLE-PMIPRFYLNSKHVMIDEDLTARISM-ADTKFS-----FQE  343 (448)
T ss_pred             HHHHHhcCc---cEEEecchHHHHHHHHHhhHHHHhhcc-hhhhhhhcccceEEecchhhhheec-ccceee-----eec
Confidence            999999865   345677899999999999999999952 3344445889999999999988742 112110     011


Q ss_pred             cccccCCcccCccccccCCCC---CccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhcc-C
Q 048419          494 THIVGTLGYLAPELTRTGKAT---TSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTL-D  569 (653)
Q Consensus       494 ~~~~gt~~y~aPE~~~~~~~~---~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l-~  569 (653)
                      ......+.|++||.++....+   .++|+|||.+++|||.|...||....+.+...               ++.-+.| -
T Consensus       344 ~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgm---------------kialeglrv  408 (448)
T KOG0195|consen  344 VGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGM---------------KIALEGLRV  408 (448)
T ss_pred             cccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhh---------------hhhhccccc
Confidence            122446789999999766543   48999999999999999999998765533211               1111112 2


Q ss_pred             cCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          570 YYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       570 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                      ..+......+.+|+.-|++.||.+||.+..|+-+|+.
T Consensus       409 ~ippgis~hm~klm~icmnedpgkrpkfdmivpilek  445 (448)
T KOG0195|consen  409 HIPPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEK  445 (448)
T ss_pred             cCCCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHH
Confidence            2334456778899999999999999999999988874

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.84  E-value=8.8e-22  Score=219.83  Aligned_cols=256  Identities=21%  Similarity=0.216  Sum_probs=191.7

Q ss_pred             CcceeeeeeCcEEEEEEEeCCCCcEEEEEEecc----C-ch-hhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEE
Q 048419          333 GEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGH----N-SQ-QGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVY  406 (653)
Q Consensus       333 ~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~----~-~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  406 (653)
                      ....++|.|.+|.|+........+..+.|....    . .. .....+..|+.+-..++|+|++..+..+.+.....-+|
T Consensus       321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~m  400 (601)
T KOG0590|consen  321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSM  400 (601)
T ss_pred             CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhh
Confidence            456789999999888887766555566665431    1 11 11222666788888899999999888888877766669


Q ss_pred             eccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccccc
Q 048419          407 DYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE  486 (653)
Q Consensus       407 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~  486 (653)
                      |||++ +|..++...     ..++..++..+++|+..|+.|||+   .+|.|||+|++|+++..++.+||+|||.+....
T Consensus       401 E~~~~-Dlf~~~~~~-----~~~~~~e~~c~fKqL~~Gv~y~h~---~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~  471 (601)
T KOG0590|consen  401 EYCPY-DLFSLVMSN-----GKLTPLEADCFFKQLLRGVKYLHS---MGLAHRDLKLENLLVTENGILKIIDFGAASVFR  471 (601)
T ss_pred             hcccH-HHHHHHhcc-----cccchhhhhHHHHHHHHHHHHHHh---cCceeccCccccEEEecCCceEEeecCcceeec
Confidence            99999 999998764     247778888999999999999999   999999999999999999999999999998775


Q ss_pred             CCCC---CcccccccCCcccCccccccCCCCC-ccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhH
Q 048419          487 HGAN---PQTTHIVGTLGYLAPELTRTGKATT-STDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQ  562 (653)
Q Consensus       487 ~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~-ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~  562 (653)
                      ....   ......+|+..|+|||.+....|++ ..||||.|+++..|++|+.||......+... .+...  .....+..
T Consensus       472 ~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~-~~~~~--~~~~~~~~  548 (601)
T KOG0590|consen  472 YPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSF-KTNNY--SDQRNIFE  548 (601)
T ss_pred             cCcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccch-hhhcc--cccccccc
Confidence            4433   3445568999999999999999876 7899999999999999999997654432211 00000  00000000


Q ss_pred             hhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          563 AIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       563 ~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                          ...........+...++.++|+.+|.+|-|+.+|++.=
T Consensus       549 ----~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~  586 (601)
T KOG0590|consen  549 ----GPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILNDE  586 (601)
T ss_pred             ----ChHHHHHhchhhHHHHHHHHccCChhheecHHHHhhCh
Confidence                00001122346778899999999999999999999743

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.83  E-value=3.6e-20  Score=174.76  Aligned_cols=272  Identities=21%  Similarity=0.256  Sum_probs=198.8

Q ss_pred             hcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCC-CceeeeeeeecccceeEEEEe
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRH-RNLVQLHGWCRKQDELLLVYD  407 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H-~niv~l~g~~~~~~~~~lV~E  407 (653)
                      ...|...+.||.|+||.+|.|..-.+|+.||||.-+...+  ..++..|..+.+.|++ ..|..+..|..+...-.+|||
T Consensus        14 ~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~--hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMd   91 (341)
T KOG1163|consen   14 GGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAK--HPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMD   91 (341)
T ss_pred             ccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCC--CcchhHHHHHHHHhccCCCCchhhhhccccccceeeee
Confidence            3568889999999999999999999999999998644332  3456788999999975 567778888888888999999


Q ss_pred             ccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEc---CCCcEEEEeecCccc
Q 048419          408 YVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLD---TYLNAKLGDFGLAKI  484 (653)
Q Consensus       408 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~---~~~~~kl~DfGla~~  484 (653)
                      .. |.+|+++..-..    ..++.++.+-++-|++.-++|+|.   ++++||||||+|+|..   ....+.++|||+++.
T Consensus        92 LL-GPsLEdLfnfC~----R~ftmkTvLMLaDQml~RiEyvH~---r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKk  163 (341)
T KOG1163|consen   92 LL-GPSLEDLFNFCS----RRFTMKTVLMLADQMLSRIEYVHL---RNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKK  163 (341)
T ss_pred             cc-CccHHHHHHHHh----hhhhHHhHHHHHHHHHHHHHHHHh---hccccccCCccceeeccccccceEEEEeccchhh
Confidence            98 789998875443    458899999999999999999999   9999999999999994   445689999999987


Q ss_pred             ccCC------CCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhccc
Q 048419          485 YEHG------ANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEG  558 (653)
Q Consensus       485 ~~~~------~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~  558 (653)
                      +...      .........||..|.+-....+..-+...|+=|+|.+|..+--|..||++........-.+.+...    
T Consensus       164 y~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~Ek----  239 (341)
T KOG1163|consen  164 YRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKISEK----  239 (341)
T ss_pred             hccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHHHHh----
Confidence            6432      122334567999999887777777788999999999999999999999986654332222222211    


Q ss_pred             chhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH---HHc-CCCCCCCCCCccc
Q 048419          559 EITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVE---FLL-GDSSLPPLPPDIH  618 (653)
Q Consensus       559 ~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~---~L~-~~~~~p~~p~~~~  618 (653)
                      ++.-.+......++    .++...+.-|=..--++-|...-+.+   +|- ...-.++.-.+|.
T Consensus       240 K~s~~ie~LC~G~P----~EF~myl~Y~R~L~F~E~Pdy~ylrqlFriLfr~ln~~~d~iyDW~  299 (341)
T KOG1163|consen  240 KMSTPIEVLCKGFP----AEFAMYLNYCRGLGFEEKPDYMYLRQLFRILFRTLNHQYDYIYDWT  299 (341)
T ss_pred             hcCCCHHHHhCCCc----HHHHHHHHHHhhcCCCCCCcHHHHHHHHHHHHhhccccCCeEeeHH
Confidence            11111111112232    34555566676666677777655444   443 3344455555653

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=99.83  E-value=2.6e-21  Score=215.18  Aligned_cols=251  Identities=22%  Similarity=0.242  Sum_probs=182.9

Q ss_pred             CcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc-hhhHHHHHHHHHH--HhhcCCCceeeeeeeecccceeEEEEe
Q 048419          331 GFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS-QQGMKEFVAEIMS--MGRLRHRNLVQLHGWCRKQDELLLVYD  407 (653)
Q Consensus       331 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~--l~~l~H~niv~l~g~~~~~~~~~lV~E  407 (653)
                      ++...+.||++.|=+|.+|++++ |. |+||++-+.. .-..+.|.++++-  ...++|||.+++.-+-......|||-+
T Consensus        24 e~~~~~~LGstRFlKv~r~k~~e-G~-vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylvRq  101 (1431)
T KOG1240|consen   24 ECHYVENLGSTRFLKVARAKDRE-GL-VVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYLVRQ  101 (1431)
T ss_pred             ceeeecccCchhhhhhhhccCCC-ce-EEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHHHHH
Confidence            45567889999999999999875 55 9999985543 3345555555443  444589999999999888888899999


Q ss_pred             ccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccc--
Q 048419          408 YVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIY--  485 (653)
Q Consensus       408 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~--  485 (653)
                      |..+ +|++.|..     ++.|..-+...|+.|++.||..+|.   .+|+|||||.+|||+++-.-+.|+||...+..  
T Consensus       102 yvkh-nLyDRlST-----RPFL~~iEKkWiaFQLL~al~qcH~---~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYL  172 (1431)
T KOG1240|consen  102 YVKH-NLYDRLST-----RPFLVLIEKKWIAFQLLKALSQCHK---LGVCHGDIKSENILITSWNWLYLTDFASFKPTYL  172 (1431)
T ss_pred             HHhh-hhhhhhcc-----chHHHHHHHHHHHHHHHHHHHHHHH---cCccccccccceEEEeeechhhhhcccccCCccC
Confidence            9965 89998865     3568888888899999999999999   99999999999999999999999999876532  


Q ss_pred             cCCCCCccccc----ccCCcccCccccccC-----------CCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHH
Q 048419          486 EHGANPQTTHI----VGTLGYLAPELTRTG-----------KATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVD  549 (653)
Q Consensus       486 ~~~~~~~~~~~----~gt~~y~aPE~~~~~-----------~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~  549 (653)
                      ..+.....+.+    ..-.+|+|||.+...           ..+++.||||+||++.||++ |+++|.-.+      +..
T Consensus       173 PeDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQ------L~a  246 (1431)
T KOG1240|consen  173 PEDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQ------LLA  246 (1431)
T ss_pred             CCCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHH------HHh
Confidence            22222221111    123489999977431           26789999999999999998 577776322      111


Q ss_pred             HHHhhhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcCC
Q 048419          550 WVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLGD  607 (653)
Q Consensus       550 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  607 (653)
                      +-..  ........+.. +      +...+.++++.|++.||+.|-++.+.++.-.|.
T Consensus       247 Yr~~--~~~~~e~~Le~-I------ed~~~Rnlil~Mi~rdPs~RlSAedyL~~yrG~  295 (1431)
T KOG1240|consen  247 YRSG--NADDPEQLLEK-I------EDVSLRNLILSMIQRDPSKRLSAEDYLQKYRGL  295 (1431)
T ss_pred             Hhcc--CccCHHHHHHh-C------cCccHHHHHHHHHccCchhccCHHHHHHhhhcc
Confidence            1111  01111111111 1      123688999999999999999999999875543

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.82  E-value=2.2e-20  Score=182.51  Aligned_cols=172  Identities=12%  Similarity=0.129  Sum_probs=132.1

Q ss_pred             HhhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhh---HHH------HHHHHHHHhhcCCCceeeeeeeec
Q 048419          327 SVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQG---MKE------FVAEIMSMGRLRHRNLVQLHGWCR  397 (653)
Q Consensus       327 ~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~---~~~------~~~E~~~l~~l~H~niv~l~g~~~  397 (653)
                      -..++|+..++||.|+||.||....  ++..+|||.+.......   ...      +.+|+..+.+++|++|..+..++.
T Consensus        28 ~l~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~  105 (232)
T PRK10359         28 FLSYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYL  105 (232)
T ss_pred             HhhCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeee
Confidence            3568899999999999999999655  36689999996542222   122      678999999999999999988755


Q ss_pred             cc--------ceeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEc
Q 048419          398 KQ--------DELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLD  469 (653)
Q Consensus       398 ~~--------~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~  469 (653)
                      ..        +..+|+|||++|.+|.++..         ++.    ....+++.+|..||+   .+++|||+||+||+++
T Consensus       106 ~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~---------~~~----~~~~~i~~~l~~lH~---~gi~H~Dikp~Nili~  169 (232)
T PRK10359        106 LAERKTLRYAHTYIMLIEYIEGVELNDMPE---------ISE----DVKAKIKASIESLHQ---HGMVSGDPHKGNFIVS  169 (232)
T ss_pred             ecccccccccCCeEEEEEEECCccHHHhhh---------ccH----HHHHHHHHHHHHHHH---cCCccCCCChHHEEEe
Confidence            33        35789999999999977631         221    245689999999999   9999999999999999


Q ss_pred             CCCcEEEEeecCcccccCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHH
Q 048419          470 TYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVA  530 (653)
Q Consensus       470 ~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ell  530 (653)
                      .++ ++|+|||............             .+.....+..++|+|+||+.+.-+.
T Consensus       170 ~~g-i~liDfg~~~~~~e~~a~d-------------~~vler~y~~~~di~~lg~~~~~~~  216 (232)
T PRK10359        170 KNG-LRIIDLSGKRCTAQRKAKD-------------RIDLERHYGIKNEIKDLGYYLLIYK  216 (232)
T ss_pred             CCC-EEEEECCCcccccchhhHH-------------HHHHHhHhcccccccceeEeehHHH
Confidence            988 9999999887543211110             1333445667999999999987664

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.82  E-value=4.4e-20  Score=178.12  Aligned_cols=139  Identities=17%  Similarity=0.138  Sum_probs=107.0

Q ss_pred             ceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchh--h-------HH-----------------HHHHHHHHHhhcCCCc
Q 048419          335 QNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQ--G-------MK-----------------EFVAEIMSMGRLRHRN  388 (653)
Q Consensus       335 ~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~--~-------~~-----------------~~~~E~~~l~~l~H~n  388 (653)
                      ...||+|+||.||+|... +|+.||||+++.....  .       ..                 ....|++.+.++.+++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~   80 (190)
T cd05147           2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAG   80 (190)
T ss_pred             CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence            357999999999999997 7999999999654211  1       01                 1234999999998877


Q ss_pred             eeeeeeeecccceeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHH-HhcCCCCeEecCCCCCcEE
Q 048419          389 LVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYL-HEECNQRVVHRDVKPSNIL  467 (653)
Q Consensus       389 iv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yL-H~~~~~~ivH~Dlkp~NIl  467 (653)
                      +.....+..  ...+|||||++++++...+...     ..+++.+..+++.|++.+|.|| |+   .+|+||||||+|||
T Consensus        81 v~~p~~~~~--~~~~iVmE~i~g~~l~~~~~~~-----~~~~~~~~~~i~~qi~~~L~~l~H~---~giiHrDlkP~NIl  150 (190)
T cd05147          81 IPCPEPILL--KSHVLVMEFIGDDGWAAPRLKD-----APLSESKARELYLQVIQIMRILYQD---CRLVHADLSEYNLL  150 (190)
T ss_pred             CCCCcEEEe--cCCEEEEEEeCCCCCcchhhhc-----CCCCHHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEE
Confidence            643332221  2238999999988776543221     2478889999999999999999 67   89999999999999


Q ss_pred             EcCCCcEEEEeecCcccc
Q 048419          468 LDTYLNAKLGDFGLAKIY  485 (653)
Q Consensus       468 l~~~~~~kl~DfGla~~~  485 (653)
                      ++ ++.++|+|||++...
T Consensus       151 i~-~~~v~LiDFG~a~~~  167 (190)
T cd05147         151 YH-DGKLYIIDVSQSVEH  167 (190)
T ss_pred             EE-CCcEEEEEccccccC
Confidence            98 478999999999754

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.80  E-value=5.2e-19  Score=174.18  Aligned_cols=202  Identities=21%  Similarity=0.263  Sum_probs=171.0

Q ss_pred             CcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcC-CCceeeeeeeecccceeEEEEecc
Q 048419          331 GFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLR-HRNLVQLHGWCRKQDELLLVYDYV  409 (653)
Q Consensus       331 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lV~E~~  409 (653)
                      +|...++||+|.||..+.|+.--+++.||||.-...+  ..-++..|....+.|. .++|..++-+..+..+-.||+|..
T Consensus        29 hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS--~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidLL  106 (449)
T KOG1165|consen   29 HYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS--EAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDLL  106 (449)
T ss_pred             cceeccccccCcceeeecccccccCceEEEEeccccC--CcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhhh
Confidence            5788999999999999999988889999999864433  2346778888888885 789999888888888889999998


Q ss_pred             CCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcC-----CCcEEEEeecCccc
Q 048419          410 PNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDT-----YLNAKLGDFGLAKI  484 (653)
Q Consensus       410 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~-----~~~~kl~DfGla~~  484 (653)
                       |.||+++..-.+    ..++.+...-++.|++.-++|+|+   +.+|.|||||+|+||..     ...+.|+|||+|+.
T Consensus       107 -GPSLEDLFD~Cg----R~FSvKTV~miA~Qmi~rie~vH~---k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~  178 (449)
T KOG1165|consen  107 -GPSLEDLFDLCG----RRFSVKTVAMIAKQMITRIEYVHE---KDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKE  178 (449)
T ss_pred             -CcCHHHHHHHhc----CcccHHhHHHHHHHHHHHHHHHHh---cceeecccCccceeecCCCCCCCceEEEEeccchhh
Confidence             789999876654    458999999999999999999999   99999999999999953     34489999999997


Q ss_pred             ccCCC------CCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhh
Q 048419          485 YEHGA------NPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAA  542 (653)
Q Consensus       485 ~~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~  542 (653)
                      +....      ........||.+||+-....+.+-+...|+=|+|-+++..+-|..||++...+
T Consensus       179 YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~  242 (449)
T KOG1165|consen  179 YRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAD  242 (449)
T ss_pred             hcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCc
Confidence            74332      23344567999999999888888999999999999999999999999976654

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=99.80  E-value=2.3e-19  Score=180.63  Aligned_cols=234  Identities=21%  Similarity=0.254  Sum_probs=154.8

Q ss_pred             cCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC---chhhHHHHHHHHHHHhhcCC----------Cceeeeeeee--
Q 048419          332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN---SQQGMKEFVAEIMSMGRLRH----------RNLVQLHGWC--  396 (653)
Q Consensus       332 f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H----------~niv~l~g~~--  396 (653)
                      +.....||.|+++.||.+.+.++++.+|||++...   .....+++.+|.-....+.+          -.++.-++..  
T Consensus        14 l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i   93 (288)
T PF14531_consen   14 LVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRI   93 (288)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEE
T ss_pred             EEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEE
Confidence            34577899999999999999999999999998543   33456778777766655432          1121111111  


Q ss_pred             -------ccc---c-----eeEEEEeccCCCCchhhhhc---ccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEe
Q 048419          397 -------RKQ---D-----ELLLVYDYVPNGSLDKLLFD---KDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVH  458 (653)
Q Consensus       397 -------~~~---~-----~~~lV~E~~~~gsL~~~l~~---~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH  458 (653)
                             ...   +     ..+++|+-+ .++|.+++..   .... ...+....++.+..|+.+.+++||+   .+++|
T Consensus        94 ~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~-~~~l~~~arl~lT~Q~I~lvA~Lh~---~GlVH  168 (288)
T PF14531_consen   94 PGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQT-HSPLAFAARLSLTVQMIRLVANLHS---YGLVH  168 (288)
T ss_dssp             TTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTT-SHHHHHHHHHHHHHHHHHHHHHHHH---TTEEE
T ss_pred             cCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccc-cchhHHHHHHHHHHHHHHHHHHHhh---cceEe
Confidence                   111   1     236778877 5688777543   2211 2346667788888999999999999   99999


Q ss_pred             cCCCCCcEEEcCCCcEEEEeecCcccccCCCCCcccccccCCcccCcccccc--------CCCCCccceeehHHHHHHHH
Q 048419          459 RDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRT--------GKATTSTDVYSYGILMLEVA  530 (653)
Q Consensus       459 ~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~ksDV~s~Gvvl~ell  530 (653)
                      +||+|+|++++.+|.++|+||+.....+....    ....+..|.+||....        -.++.+.|.|++|+++|.|+
T Consensus       169 gdi~~~nfll~~~G~v~Lg~F~~~~r~g~~~~----~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lW  244 (288)
T PF14531_consen  169 GDIKPENFLLDQDGGVFLGDFSSLVRAGTRYR----CSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLW  244 (288)
T ss_dssp             ST-SGGGEEE-TTS-EEE--GGGEEETTEEEE----GGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHH
T ss_pred             cccceeeEEEcCCCCEEEcChHHHeecCceee----ccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHH
Confidence            99999999999999999999988775432111    1234578999997643        24788999999999999999


Q ss_pred             hCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCC
Q 048419          531 CGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYR  594 (653)
Q Consensus       531 tG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~R  594 (653)
                      ||+.||+.........                   .....+. +.++.+..|+..+|+.||.+|
T Consensus       245 C~~lPf~~~~~~~~~~-------------------~~f~~C~-~~Pe~v~~LI~~lL~~~~~~R  288 (288)
T PF14531_consen  245 CGRLPFGLSSPEADPE-------------------WDFSRCR-DMPEPVQFLIRGLLQRNPEDR  288 (288)
T ss_dssp             HSS-STCCCGGGSTSG-------------------GGGTTSS----HHHHHHHHHHT-SSGGGS
T ss_pred             HccCCCCCCCcccccc-------------------ccchhcC-CcCHHHHHHHHHHccCCcccC
Confidence            9999998654321100                   0222333 556778999999999999988

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=99.80  E-value=1e-19  Score=194.35  Aligned_cols=213  Identities=27%  Similarity=0.398  Sum_probs=161.4

Q ss_pred             HhhcCCCceeeeeeeecccceeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCe-Eec
Q 048419          381 MGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRV-VHR  459 (653)
Q Consensus       381 l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~i-vH~  459 (653)
                      |+.+.|.|+.+++|.|.+....++|.+||..|+|.+.+....    ..++|.-...+.++|+.||.|||.   .+| .|+
T Consensus         1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~----~~~d~~F~~s~~rdi~~Gl~ylh~---s~i~~hg   73 (484)
T KOG1023|consen    1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNED----IKLDYFFILSFIRDISKGLAYLHN---SPIGYHG   73 (484)
T ss_pred             CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccc----cCccHHHHHHHHHHHHHHHHHHhc---Ccceeee
Confidence            467899999999999999999999999999999999998753    348899999999999999999999   444 999


Q ss_pred             CCCCCcEEEcCCCcEEEEeecCcccccCCCC-CcccccccCCcccCccccccC-------CCCCccceeehHHHHHHHHh
Q 048419          460 DVKPSNILLDTYLNAKLGDFGLAKIYEHGAN-PQTTHIVGTLGYLAPELTRTG-------KATTSTDVYSYGILMLEVAC  531 (653)
Q Consensus       460 Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~-------~~~~ksDV~s~Gvvl~ellt  531 (653)
                      .++++|.++|..+.+||+|||+......... .......-..-|.|||.+...       ..+.+.||||||++++|+++
T Consensus        74 ~l~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~  153 (484)
T KOG1023|consen   74 ALKSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILF  153 (484)
T ss_pred             eeccccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHh
Confidence            9999999999999999999999887643111 111111234579999998763       14678999999999999999


Q ss_pred             CCCCCChhhhhhH-HHHHHHHHhhhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          532 GRRSIEPQKAAAE-LLLVDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       532 G~~p~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                      .+.||........ ..+..++...     -...+.+.+.... +..+.+..++..||..+|.+||++.+|-..++.
T Consensus       154 r~~~~~~~~~~~~~~eii~~~~~~-----~~~~~rP~i~~~~-e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~  223 (484)
T KOG1023|consen  154 RSGPFDLRNLVEDPDEIILRVKKG-----GSNPFRPSIELLN-ELPPELLLLVARCWEEIPEKRPSIEQIRSKLLT  223 (484)
T ss_pred             ccCccccccccCChHHHHHHHHhc-----CCCCcCcchhhhh-hcchHHHHHHHHhcccChhhCccHHHHHhhhhh
Confidence            9999986332211 1222233320     1111112221111 333479999999999999999999999988865

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.79  E-value=8e-19  Score=169.80  Aligned_cols=141  Identities=19%  Similarity=0.182  Sum_probs=109.7

Q ss_pred             ceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchh---------------------h-----HHHHHHHHHHHhhcCCCc
Q 048419          335 QNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQ---------------------G-----MKEFVAEIMSMGRLRHRN  388 (653)
Q Consensus       335 ~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~---------------------~-----~~~~~~E~~~l~~l~H~n  388 (653)
                      ...||+|++|.||+|.+. +|+.||||+++.....                     .     ...+..|.+.+.++.|++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~   80 (190)
T cd05145           2 NGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAG   80 (190)
T ss_pred             CceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence            468999999999999987 7999999998754211                     0     112357899999999998


Q ss_pred             eeeeeeeecccceeEEEEeccCCCCchhh-hhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEE
Q 048419          389 LVQLHGWCRKQDELLLVYDYVPNGSLDKL-LFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNIL  467 (653)
Q Consensus       389 iv~l~g~~~~~~~~~lV~E~~~~gsL~~~-l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIl  467 (653)
                      +.....+...  ..+|||||++++++... +..      ..++..+..+++.|++.++.+||+.  .+|+||||||+|||
T Consensus        81 i~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~~------~~~~~~~~~~i~~~l~~~l~~lH~~--~givHrDlkP~NIl  150 (190)
T cd05145          81 VPVPEPILLK--KNVLVMEFIGDDGSPAPRLKD------VPLEEEEAEELYEQVVEQMRRLYQE--AGLVHGDLSEYNIL  150 (190)
T ss_pred             CCCceEEEec--CCEEEEEEecCCCchhhhhhh------ccCCHHHHHHHHHHHHHHHHHHHHh--CCEecCCCChhhEE
Confidence            7444333322  24899999998865443 322      2367778899999999999999983  69999999999999


Q ss_pred             EcCCCcEEEEeecCcccccC
Q 048419          468 LDTYLNAKLGDFGLAKIYEH  487 (653)
Q Consensus       468 l~~~~~~kl~DfGla~~~~~  487 (653)
                      ++ ++.++|+|||++.....
T Consensus       151 l~-~~~~~liDFG~a~~~~~  169 (190)
T cd05145         151 YH-DGKPYIIDVSQAVELDH  169 (190)
T ss_pred             EE-CCCEEEEEcccceecCC
Confidence            99 88999999999986543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.77  E-value=1.7e-18  Score=165.68  Aligned_cols=186  Identities=16%  Similarity=0.084  Sum_probs=138.2

Q ss_pred             CcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCch----hhHHHHHHHHHHHhhcC-CCceeeeeeeecccceeEEEEe
Q 048419          333 GEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQ----QGMKEFVAEIMSMGRLR-HRNLVQLHGWCRKQDELLLVYD  407 (653)
Q Consensus       333 ~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lV~E  407 (653)
                      .....|++|+||+||.+..  .+..++.+.+.....    -....+.+|+++|++|. |+++++++++    +..+++||
T Consensus         5 ~~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvme   78 (218)
T PRK12274          5 AVNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRS   78 (218)
T ss_pred             ccceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEe
Confidence            4567899999999997765  477888887754432    11225789999999995 5889999886    44699999


Q ss_pred             ccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCC-CCCcEEEcCCCcEEEEeecCccccc
Q 048419          408 YVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDV-KPSNILLDTYLNAKLGDFGLAKIYE  486 (653)
Q Consensus       408 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dl-kp~NIll~~~~~~kl~DfGla~~~~  486 (653)
                      |+.|.+|...+..            ....++.|++++|.++|+   ++|+|||| ||.|||++.++.++|+|||++....
T Consensus        79 yI~G~~L~~~~~~------------~~~~~~~qi~~~L~~lH~---~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~  143 (218)
T PRK12274         79 YLAGAAMYQRPPR------------GDLAYFRAARRLLQQLHR---CGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGN  143 (218)
T ss_pred             eecCccHHhhhhh------------hhHHHHHHHHHHHHHHHH---CcCccCCCCCcceEEEcCCCCEEEEECCCceecC
Confidence            9999888654311            113477899999999999   99999999 7999999999999999999998654


Q ss_pred             CCCCC----c--------ccccccCCcccCccccccC-CCC-CccceeehHHHHHHHHhCCCCCChh
Q 048419          487 HGANP----Q--------TTHIVGTLGYLAPELTRTG-KAT-TSTDVYSYGILMLEVACGRRSIEPQ  539 (653)
Q Consensus       487 ~~~~~----~--------~~~~~gt~~y~aPE~~~~~-~~~-~ksDV~s~Gvvl~elltG~~p~~~~  539 (653)
                      .....    .        ......++.|++|+...-. ..+ ...+-++-|+-+|.++|++.+.-..
T Consensus       144 ~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~  210 (218)
T PRK12274        144 PRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWED  210 (218)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCcccc
Confidence            33210    0        0112356778888754322 233 4567778899999999999886543

>PRK10345 hypothetical protein; Provisional

Probab=99.77  E-value=2.9e-18  Score=167.13  Aligned_cols=136  Identities=23%  Similarity=0.262  Sum_probs=108.1

Q ss_pred             CcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhc-----CCCceeeeeeeecccc---e-eE
Q 048419          333 GEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRL-----RHRNLVQLHGWCRKQD---E-LL  403 (653)
Q Consensus       333 ~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-----~H~niv~l~g~~~~~~---~-~~  403 (653)
                      ...++||+|+||.||.  ++.++.. +||++........+.+.+|+..++++     .||||++++|++.+..   . +.
T Consensus         5 ~~~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~   81 (210)
T PRK10345          5 SEQSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYD   81 (210)
T ss_pred             CCcceecCCCceEEEE--CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEE
Confidence            4467899999999996  6666665 69998765445567899999999999     5799999999998874   3 34


Q ss_pred             EEEec--cCCCCchhhhhcccccccccchhhhHHHHHHHHHHHH-HHHHhcCCCCeEecCCCCCcEEEcC----CCcEEE
Q 048419          404 LVYDY--VPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSL-LYLHEECNQRVVHRDVKPSNILLDT----YLNAKL  476 (653)
Q Consensus       404 lV~E~--~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L-~yLH~~~~~~ivH~Dlkp~NIll~~----~~~~kl  476 (653)
                      +|+||  +++++|.+++.+.      .+++.  ..++.+++.++ +|||+   ++|+||||||+|||++.    +.+++|
T Consensus        82 ~I~e~~G~~~~tL~~~l~~~------~~~e~--~~~~~~~L~~l~~yLh~---~~IvhrDlKp~NILl~~~~~~~~~~~L  150 (210)
T PRK10345         82 VIADFDGKPSITLTEFAEQC------RYEED--VAQLRQLLKKLKRYLLD---NRIVTMELKPQNILCQRISESEVIPVV  150 (210)
T ss_pred             EEecCCCCcchhHHHHHHcc------cccHh--HHHHHHHHHHHHHHHHH---CCEeecCCCHHHEEEeccCCCCCcEEE
Confidence            78999  6689999999552      14444  35677778777 99999   99999999999999963    347999


Q ss_pred             EeecCc
Q 048419          477 GDFGLA  482 (653)
Q Consensus       477 ~DfGla  482 (653)
                      +|++.+
T Consensus       151 iDg~G~  156 (210)
T PRK10345        151 CDNIGE  156 (210)
T ss_pred             EECCCC
Confidence            995443

>cd06901 lectin_VIP36_VIPL VIP36 and VIPL type 1 transmembrane proteins, lectin domain

Probab=99.76  E-value=6.6e-17  Score=160.38  Aligned_cols=199  Identities=15%  Similarity=0.155  Sum_probs=129.6

Q ss_pred             CCCeEEecceEecCCCcEEecCCCCCceEEEEcCCCeecccCCCCceeeeEEEEEEEEecCCCCCCCCceEEEEecCCCC
Q 048419           18 HANLSLEGAAYISTSGILTVTNKSEGLIGHALYPNPLRFKTSNKSVAIDFRTNFVFSILPKYPDLGGQGLAFIIISTNRP   97 (653)
Q Consensus        18 ~~~l~~~g~a~~~~~g~l~Lt~~~~~~~Gr~~y~~pi~~~~~~~~~~~sF~t~F~f~i~~~~~~~~gdGlaF~l~~~~~~   97 (653)
                      ..++.+.|+|.+. ++.|+||++...+.|++||+.|+++        .+|+|+|+|+|.+.....+||||||+++.... 
T Consensus        19 i~~w~~~G~a~v~-~~~IrLTp~~~~~~G~~w~~~p~~~--------~~F~~~f~F~I~~~~~~~~GdGlAfw~t~~~~-   88 (248)
T cd06901          19 MPLWDFLGSTMVT-SQYIRLTPDHQSKQGSIWNRVPCYL--------RDWEMHVHFKVHGSGKNLFGDGFAIWYTKERM-   88 (248)
T ss_pred             CCCEEEcceEEEc-CCeEEECCCCCCCEEEEeccCCccC--------CCEEEEEEEEEeCCCCCCCCCEEEEEEEcCCC-
Confidence            4689999999987 6799999998889999999999998        47999999999886656789999999997642 


Q ss_pred             CCCCCCccccCCCcccCCCCCCCCceEEEEeeccccccc-CCCCCCeeeEecC-CCCcCCcccCccccCCCCcccccc-C
Q 048419           98 ENCLANQFLGLPNITMSSSTKFSTRMLAVEFDIIQNTEL-IDINDNHVGIDIS-SLISSASEPASYYSGNNHRIPILL-R  174 (653)
Q Consensus        98 ~~~~~g~~lG~~~~~~~~~~~~~~~~vaVEFDt~~n~~~-~d~~~~Hvgid~n-s~~s~~~~~~~~~~~~~~~~~~~l-~  174 (653)
                         ..|..+|-.+.-+.         +||-|||+.|.+- .....+-|.+-+| +...-....-+... ..+...... .
T Consensus        89 ---~~G~~fG~~~~f~G---------l~I~~Dt~~n~~~~~~~~~P~i~~~~NDGt~~yd~~~Dg~~~-~~~~C~~~~rn  155 (248)
T cd06901          89 ---QPGPVFGSKDNFHG---------LAIFFDTYSNQNGEHEHVHPYISAMVNNGSLSYDHDRDGTHT-ELAGCSAPFRN  155 (248)
T ss_pred             ---ccCcccccCCCCce---------EEEEEECCCCCCCcccCCCceEEEEEcCCCeeecccCCCchh-hcCceeeeccC
Confidence               23445565443332         8999999998531 0122334534332 21111100000000 000111222 3


Q ss_pred             CCCceEEEEEecCCceEEEEEEeeCCCCCCCCCceeeeecCCc-ccccceEEeEecccCcccceeeecceeee
Q 048419          175 SGDPIQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSS-VIDEYMYTGFSASTGLITASHNVHGWSIS  246 (653)
Q Consensus       175 ~g~~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~~l~~~~dL~~-~l~~~~~vGFsastg~~~~~~~i~sWsf~  246 (653)
                      .+...+++|.|...  .|.|.+...+...- ...    ..... .||...|+||||+||...+.|.|++-.+.
T Consensus       156 ~~~~t~~rI~Y~~~--~l~v~vd~~~~~~w-~~C----f~~~~v~LP~~~yfGiSA~Tg~~sd~hdIlsv~~~  221 (248)
T cd06901         156 KDHDTFVAIRYSKG--RLTVMTDIDGKNEW-KEC----FDVTGVRLPTGYYFGASAATGDLSDNHDIISMKLY  221 (248)
T ss_pred             CCCCeEEEEEEECC--eEEEEEecCCCCce-eee----EEeCCeecCCCCEEEEEecCCCCCCcEEEEEEEEe
Confidence            45667899999964  46666654332110 111    11122 36778999999999999999999987664

The vesicular integral protein of 36 kDa (VIP36) is a type 1 transmembrane protein of the mammalian early secretory pathway that acts as a cargo receptor transporting high mannose type glycoproteins between the Golgi and the endoplasmic reticulum (ER). Lectins of the early secretory pathway are involved in the selective transport of newly synthesized glycoproteins from the ER to the ER-Golgi intermediate compartment (ERGIC). The most prominent cycling lectin is the mannose-binding type1 membrane protein ERGIC-53, which functions as a cargo receptor to facilitate export of glycoproteins from the ER. L-type lectins have a dome-shaped beta-barrel carbohydrate recognition domain with a curved seven-stranded beta-sheet referred to as the "front face" and a flat six-stranded beta-sheet referred to as the "back face". This domain homodimerizes so that adjacent back sheets form a contiguous 12-stranded she

>smart00090 RIO RIO-like kinase

Probab=99.72  E-value=4.1e-17  Score=162.86  Aligned_cols=141  Identities=17%  Similarity=0.186  Sum_probs=109.7

Q ss_pred             cCcceeeeeeCcEEEEEEE-eCCCCcEEEEEEeccCchh------------------------hHHHHHHHHHHHhhcCC
Q 048419          332 FGEQNLVGSGGFGRVYRGL-MPSLGLEVAIKRIGHNSQQ------------------------GMKEFVAEIMSMGRLRH  386 (653)
Q Consensus       332 f~~~~~LG~G~fg~Vy~~~-~~~~~~~vavK~~~~~~~~------------------------~~~~~~~E~~~l~~l~H  386 (653)
                      |.+.+.||+|++|.||+|. +..+|+.||||++......                        ....+..|+..+.++.+
T Consensus        30 ~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~~  109 (237)
T smart00090       30 SAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLYE  109 (237)
T ss_pred             HHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence            6678899999999999998 5567999999998643210                        01235689999999975


Q ss_pred             C--ceeeeeeeecccceeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCC-eEecCCCC
Q 048419          387 R--NLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQR-VVHRDVKP  463 (653)
Q Consensus       387 ~--niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~-ivH~Dlkp  463 (653)
                      .  .+.+++++    ...++||||+++++|...+...     ..+...+...++.|++.++.+||+   .+ ++||||||
T Consensus       110 ~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~LH~---~g~iiH~Dikp  177 (237)
T smart00090      110 AGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKD-----VEPEEEEEFELYDDILEEMRKLYK---EGELVHGDLSE  177 (237)
T ss_pred             cCCCCCeeeEe----cCceEEEEEecCCccccccccc-----CCcchHHHHHHHHHHHHHHHHHHh---cCCEEeCCCCh
Confidence            3  34444443    2348999999998887655322     224555667899999999999999   88 99999999


Q ss_pred             CcEEEcCCCcEEEEeecCcccc
Q 048419          464 SNILLDTYLNAKLGDFGLAKIY  485 (653)
Q Consensus       464 ~NIll~~~~~~kl~DfGla~~~  485 (653)
                      +||+++ +++++|+|||.+...
T Consensus       178 ~NIli~-~~~i~LiDFg~a~~~  198 (237)
T smart00090      178 YNILVH-DGKVVIIDVSQSVEL  198 (237)
T ss_pred             hhEEEE-CCCEEEEEChhhhcc
Confidence            999999 889999999998754

>cd06902 lectin_ERGIC-53_ERGL ERGIC-53 and ERGL type 1 transmembrane proteins, N-terminal lectin domain

Probab=99.72  E-value=7.5e-16  Score=150.95  Aligned_cols=198  Identities=19%  Similarity=0.200  Sum_probs=134.3

Q ss_pred             CCeEEecceEecCCCcEEecCCCCCceEEEEcCCCeecccCCCCceeeeEEEEEEEEecCCCCCCCCceEEEEecCCCCC
Q 048419           19 ANLSLEGAAYISTSGILTVTNKSEGLIGHALYPNPLRFKTSNKSVAIDFRTNFVFSILPKYPDLGGQGLAFIIISTNRPE   98 (653)
Q Consensus        19 ~~l~~~g~a~~~~~g~l~Lt~~~~~~~Gr~~y~~pi~~~~~~~~~~~sF~t~F~f~i~~~~~~~~gdGlaF~l~~~~~~~   98 (653)
                      .+..+.|+|.+. ++.|+||++..++.|.+|.+.|++.        -+|+.+|+|+|.... ..+||||||+++....  
T Consensus        22 ~~W~~~G~t~~~-~~~IrLTp~~~~~~G~iw~~~~~~~--------~~w~ie~~Fri~g~~-~~~gdG~a~W~t~~~~--   89 (225)
T cd06902          22 PFWSHGGDAIAS-LEQVRLTPSLRSKKGSVWTKNPFSF--------ENWEVEVTFRVTGRG-RIGADGLAIWYTKERG--   89 (225)
T ss_pred             CceEecccEEec-CCEEEECCCCCCCEEEEeeCCCcCC--------CCEEEEEEEEEecCC-CCCCCEEEEEEECCCC--
Confidence            579999999885 8899999999999999999999984        369999999998653 3478999999997542  


Q ss_pred             CCCCCccccCCCcccCCCCCCCCceEEEEeecccccccCCCCCCeeeEecC-CCCcCCcccCccccCCCCccccccC-CC
Q 048419           99 NCLANQFLGLPNITMSSSTKFSTRMLAVEFDIIQNTELIDINDNHVGIDIS-SLISSASEPASYYSGNNHRIPILLR-SG  176 (653)
Q Consensus        99 ~~~~g~~lG~~~~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~~~Hvgid~n-s~~s~~~~~~~~~~~~~~~~~~~l~-~g  176 (653)
                        ..|+.+|..+.-+.         +||.|||+.|.+  ..+.+.|.+-+| +........-... ...+....... ..
T Consensus        90 --~~G~~~G~~~~f~G---------l~I~~Dt~~n~~--~~~~p~i~~~~NDGt~~yd~~~D~~~-~~~~~C~~~~rn~~  155 (225)
T cd06902          90 --EEGPVFGSSDKWNG---------VGIFFDSFDNDG--KKNNPAILVVGNDGTKSYDHQNDGLT-QALGSCLRDFRNKP  155 (225)
T ss_pred             --CCCCccCCCCcccE---------EEEEEECCCCCC--CCCCcEEEEEECCCCeeccccCCCcc-cccceEEEeccCCC
Confidence              24566777665443         899999998852  344567755543 2221111100000 00011122332 35


Q ss_pred             CceEEEEEecCCceEEEEEEeeCCCCCCCCCceeeeecCCc-ccccceEEeEecccCcccceeeecceeee
Q 048419          177 DPIQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSS-VIDEYMYTGFSASTGLITASHNVHGWSIS  246 (653)
Q Consensus       177 ~~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~~l~~~~dL~~-~l~~~~~vGFsastg~~~~~~~i~sWsf~  246 (653)
                      .+.+++|.|...  +|.|.+.....+.  ......-+++.. .||+..|+||||+||...+.|.|++|++.
T Consensus       156 ~p~~~rI~Y~~~--~l~V~~d~~~~~~--~~~~~~Cf~~~~v~LP~~~yfGiSA~Tg~l~d~hDIls~~~~  222 (225)
T cd06902         156 YPVRAKITYYQN--VLTVSINNGFTPN--KDDYELCTRVENMVLPPNGYFGVSAATGGLADDHDVLSFLTF  222 (225)
T ss_pred             CCeEEEEEEECC--eEEEEEeCCcCCC--CCcccEEEecCCeeCCCCCEEEEEecCCCCCCcEeEEEEEEe
Confidence            789999999874  5888876422211  111222233333 36788999999999999999999999985

ERGIC-53 and ERGL, N-terminal carbohydrate recognition domain. ERGIC-53 and ERGL are eukaryotic mannose-binding type 1 transmembrane proteins of the early secretory pathway that transport newly synthesized glycoproteins from the endoplasmic reticulum (ER) to the ER-Golgi intermediate compartment (ERGIC). ERGIC-53 and ERGL have an N-terminal lectin-like carbohydrate recognition domain (represented by this alignment model) as well as a C-terminal transmembrane domain. ERGIC-53 functions as a 'cargo receptor' to facilitate the export of glycoproteins with different characteristics from the ER, while the ERGIC-53-like protein (ERGL) which may act as a regulator of ERGIC-53. In mammals, ERGIC-53 forms a complex with MCFD2 (multi-coagulation factor deficiency 2) which then recruits blood coagulation factors V and VIII. Mutations in either MCFD2 or ERGIC-53 cause a mild form of inherite

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.71  E-value=1.3e-17  Score=190.06  Aligned_cols=199  Identities=22%  Similarity=0.236  Sum_probs=156.3

Q ss_pred             HHHHhhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcC---CCceeeeeeeecccc
Q 048419          324 ELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLR---HRNLVQLHGWCRKQD  400 (653)
Q Consensus       324 el~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---H~niv~l~g~~~~~~  400 (653)
                      +++.-...|.+.+.||+|+||+||+|.... |+.||+|+-+..+.   -+|.=-.+++.+|+   -+-|..+...+.-.+
T Consensus       692 ~~~~~~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~---WEfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~  767 (974)
T KOG1166|consen  692 EFEVGGEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNP---WEFYICLQVMERLKPQMLPSIMHISSAHVFQN  767 (974)
T ss_pred             eeeecceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCc---eeeeehHHHHHhhchhhhcchHHHHHHHccCC
Confidence            344445678899999999999999999976 99999999755432   12222223344444   234455555556667


Q ss_pred             eeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEc-------CCCc
Q 048419          401 ELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLD-------TYLN  473 (653)
Q Consensus       401 ~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~-------~~~~  473 (653)
                      ..+||+||.+.|+|.+++..     .+.++|.....++.|+++.+++||.   .+|||+||||+|.||.       .+.-
T Consensus       768 ~S~lv~ey~~~Gtlld~~N~-----~~~m~e~lv~~~~~qml~ive~lH~---~~IIHgDiKPDNfll~~~~~~~~~~~~  839 (974)
T KOG1166|consen  768 ASVLVSEYSPYGTLLDLINT-----NKVMDEYLVMFFSCQMLRIVEHLHA---MGIIHGDIKPDNFLLRREICADSDSKG  839 (974)
T ss_pred             cceeeeeccccccHHHhhcc-----CCCCCchhhhHHHHHHHHHHHHHHh---cceecccCCcceeEeecccCCCCcccc
Confidence            78999999999999999973     4568999999999999999999999   9999999999999993       2345


Q ss_pred             EEEEeecCcccccCCCC-CcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCC
Q 048419          474 AKLGDFGLAKIYEHGAN-PQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRR  534 (653)
Q Consensus       474 ~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~  534 (653)
                      ++|+|||-+..+..-.. ......++|-.+--+|...+..++...|.|.++.+++-|+.|+.
T Consensus       840 l~lIDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y  901 (974)
T KOG1166|consen  840 LYLIDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKY  901 (974)
T ss_pred             eEEEecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHH
Confidence            89999999875532221 23455678889999999999999999999999999999999874

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.71  E-value=2.1e-18  Score=184.11  Aligned_cols=187  Identities=26%  Similarity=0.324  Sum_probs=154.6

Q ss_pred             eeeeeCcEEEEEEEe---CCCCcEEEEEEeccCchh--hHHHHHHHHHHHhhcC-CCceeeeeeeecccceeEEEEeccC
Q 048419          337 LVGSGGFGRVYRGLM---PSLGLEVAIKRIGHNSQQ--GMKEFVAEIMSMGRLR-HRNLVQLHGWCRKQDELLLVYDYVP  410 (653)
Q Consensus       337 ~LG~G~fg~Vy~~~~---~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lV~E~~~  410 (653)
                      ++|+|.||.|+++.-   .+.|..+|+|.+.+....  .......|..++..++ |+.+|++...+..+...+++.++..
T Consensus         1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r   80 (612)
T KOG0603|consen    1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR   80 (612)
T ss_pred             CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence            378999999987542   344778999988654211  1125567888888887 9999999999999999999999999


Q ss_pred             CCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCCC
Q 048419          411 NGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGAN  490 (653)
Q Consensus       411 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~  490 (653)
                      +|.|...+....     ..+..........++-+++++|+   .+++|||+|++||+++.+|.+|+.|||+.+..-... 
T Consensus        81 gg~lft~l~~~~-----~f~~~~~~~~~aelaLald~lh~---l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~-  151 (612)
T KOG0603|consen   81 GGDLFTRLSKEV-----MFDELDVAFYLAELALALDHLHK---LGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEK-  151 (612)
T ss_pred             cchhhhccccCC-----chHHHHHHHHHHHHHHHHhhcch---hHHHHhcccccceeecccCccccCCchhhhHhHhhh-
Confidence            999998886643     35566666677889999999999   999999999999999999999999999998653322 


Q ss_pred             CcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCCh
Q 048419          491 PQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEP  538 (653)
Q Consensus       491 ~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~  538 (653)
                          ..+||..|||||++.  ......|-||||++++||+||..||..
T Consensus       152 ----~~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~  193 (612)
T KOG0603|consen  152 ----IACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG  193 (612)
T ss_pred             ----hcccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch
Confidence                128999999999998  567889999999999999999999986

>PRK14879 serine/threonine protein kinase; Provisional

Probab=99.69  E-value=1.4e-16  Score=156.70  Aligned_cols=134  Identities=22%  Similarity=0.320  Sum_probs=112.7

Q ss_pred             eeeeeeCcEEEEEEEeCCCCcEEEEEEeccCch--------hhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEe
Q 048419          336 NLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQ--------QGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYD  407 (653)
Q Consensus       336 ~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E  407 (653)
                      +.||+|++|.||+|..  .|..+++|+......        .....+.+|+..+..++|+++.....++...+..+++||
T Consensus         2 ~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e   79 (211)
T PRK14879          2 KLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVME   79 (211)
T ss_pred             cccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEE
Confidence            5799999999999987  467899998643221        112457889999999999998877777777778899999


Q ss_pred             ccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccc
Q 048419          408 YVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKI  484 (653)
Q Consensus       408 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~  484 (653)
                      |++|++|.+++....        + .+..++.+++.+|.+||+   .+++|+|++|.|||++ ++.++|+|||++..
T Consensus        80 ~~~G~~L~~~~~~~~--------~-~~~~i~~~i~~~l~~lH~---~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~  143 (211)
T PRK14879         80 YIEGEPLKDLINSNG--------M-EELELSREIGRLVGKLHS---AGIIHGDLTTSNMILS-GGKIYLIDFGLAEF  143 (211)
T ss_pred             EeCCcCHHHHHHhcc--------H-HHHHHHHHHHHHHHHHHh---CCcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence            999999999885421        2 788999999999999999   8999999999999999 78899999998875

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=99.69  E-value=1.4e-16  Score=178.51  Aligned_cols=145  Identities=19%  Similarity=0.238  Sum_probs=115.2

Q ss_pred             HHHHHHhhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEec-cC-c------hhhHHHHHHHHHHHhhcCCCceeeee
Q 048419          322 YAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIG-HN-S------QQGMKEFVAEIMSMGRLRHRNLVQLH  393 (653)
Q Consensus       322 ~~el~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~-~~-~------~~~~~~~~~E~~~l~~l~H~niv~l~  393 (653)
                      +.........|...+.||+|+||.||+|.+.+.  .+++|+.. .. .      ....+.+.+|++++++++|++++...
T Consensus       325 ~~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~~--~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~  402 (535)
T PRK09605        325 WIKEEEVKRRKIPDHLIGKGAEADIKKGEYLGR--DAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPV  402 (535)
T ss_pred             eccccccccccCccceeccCCcEEEEEEeecCc--cceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeE
Confidence            333344455566788999999999999988643  34444321 11 1      11235688999999999999998888


Q ss_pred             eeecccceeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCc
Q 048419          394 GWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLN  473 (653)
Q Consensus       394 g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~  473 (653)
                      .++...+..++||||+++++|.+++.             .+..++.+++++|.|||+   .+++||||||+|||+ +++.
T Consensus       403 ~~~~~~~~~~lv~E~~~g~~L~~~l~-------------~~~~~~~~i~~~L~~lH~---~giiHrDlkp~NILl-~~~~  465 (535)
T PRK09605        403 IYDVDPEEKTIVMEYIGGKDLKDVLE-------------GNPELVRKVGEIVAKLHK---AGIVHGDLTTSNFIV-RDDR  465 (535)
T ss_pred             EEEEeCCCCEEEEEecCCCcHHHHHH-------------HHHHHHHHHHHHHHHHHh---CCCccCCCChHHEEE-ECCc
Confidence            88877777899999999999988774             345789999999999999   999999999999999 6789


Q ss_pred             EEEEeecCcccc
Q 048419          474 AKLGDFGLAKIY  485 (653)
Q Consensus       474 ~kl~DfGla~~~  485 (653)
                      ++|+|||+++..
T Consensus       466 ~~liDFGla~~~  477 (535)
T PRK09605        466 LYLIDFGLGKYS  477 (535)
T ss_pred             EEEEeCcccccC
Confidence            999999999753

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=99.68  E-value=3.3e-16  Score=152.67  Aligned_cols=142  Identities=18%  Similarity=0.190  Sum_probs=109.7

Q ss_pred             HHhhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchh----------------------hHHHHHHHHHHHhh
Q 048419          326 ASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQ----------------------GMKEFVAEIMSMGR  383 (653)
Q Consensus       326 ~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~----------------------~~~~~~~E~~~l~~  383 (653)
                      ......|...+.||+|+||.||++... +|+.||||++......                      ....+..|+..+.+
T Consensus        11 ~~~~~~~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~   89 (198)
T cd05144          11 VKRGVVESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKA   89 (198)
T ss_pred             HHcCchhhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHH
Confidence            333334667789999999999999885 6899999987543210                      11235678889999


Q ss_pred             cCCCc--eeeeeeeecccceeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCC
Q 048419          384 LRHRN--LVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDV  461 (653)
Q Consensus       384 l~H~n--iv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dl  461 (653)
                      +.|++  +.+.++.    ...++||||+++++|..+...           .....++.+++.++.++|+   .+++|+||
T Consensus        90 l~~~~i~v~~~~~~----~~~~lv~e~~~g~~L~~~~~~-----------~~~~~~~~~i~~~l~~lh~---~gi~H~Dl  151 (198)
T cd05144          90 LYEEGFPVPKPIDW----NRHAVVMEYIDGVELYRVRVL-----------EDPEEVLDEILEEIVKAYK---HGIIHGDL  151 (198)
T ss_pred             HHHcCCCCCceeec----CCceEEEEEeCCcchhhcccc-----------ccHHHHHHHHHHHHHHHHH---CCCCcCCC
Confidence            98774  4444442    345899999999998765421           2345788999999999999   99999999


Q ss_pred             CCCcEEEcCCCcEEEEeecCccccc
Q 048419          462 KPSNILLDTYLNAKLGDFGLAKIYE  486 (653)
Q Consensus       462 kp~NIll~~~~~~kl~DfGla~~~~  486 (653)
                      ||+||++++++.++|+|||++....
T Consensus       152 ~p~Nill~~~~~~~liDfg~~~~~~  176 (198)
T cd05144         152 SEFNILVDDDEKIYIIDWPQMVSTD  176 (198)
T ss_pred             CcccEEEcCCCcEEEEECCccccCC
Confidence            9999999999999999999997543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=99.68  E-value=8.2e-18  Score=176.30  Aligned_cols=175  Identities=25%  Similarity=0.355  Sum_probs=130.9

Q ss_pred             eeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeec
Q 048419          401 ELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFG  480 (653)
Q Consensus       401 ~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG  480 (653)
                      .++|.|++|...+|.++|..+..  ....++.....++.|++.++.|      ++.+|+|+||.||+...+..+||+|||
T Consensus       330 ~lyI~Mn~c~~~tledWl~rr~~--~e~~s~s~~~~~~~q~~~~~~y------k~~ihrdlkp~nif~~~d~q~kIgDFg  401 (516)
T KOG1033|consen  330 YLYIQMNLCEKETLEDWLRRRRT--GEERSLSLMLDIFKQIAPAVEY------KGLIHRDLKPSNIFFSDDDQLKIGDFG  401 (516)
T ss_pred             chhhhhhhhhhhhHHHHhhCCCc--ccccchhHHHHHHHhhccchhh------ccchhhhccccccccccchhhhhhhhh
Confidence            57899999999999999976543  3456788889999999999999      588999999999999999999999999


Q ss_pred             CcccccCCC-----CCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhh
Q 048419          481 LAKIYEHGA-----NPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKEL  554 (653)
Q Consensus       481 la~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~  554 (653)
                      +........     ....+...||..||+||.+.+..|+.|+|||+||++|+||+. =..+++....          ..-
T Consensus       402 l~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er~~t----------~~d  471 (516)
T KOG1033|consen  402 LVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFERIAT----------LTD  471 (516)
T ss_pred             heeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHHHHh----------hhh
Confidence            998765543     234456689999999999999999999999999999999986 2222211100          000


Q ss_pred             hcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHH
Q 048419          555 HLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVV  601 (653)
Q Consensus       555 ~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  601 (653)
                      ...+.++..   .+.     .-+.-..++.+++.+.|.+||++.++.
T Consensus       472 ~r~g~ip~~---~~~-----d~p~e~~ll~~lls~~p~~RP~~~~~~  510 (516)
T KOG1033|consen  472 IRDGIIPPE---FLQ-----DYPEEYTLLQQLLSPSPEERPSAIEVA  510 (516)
T ss_pred             hhcCCCChH---Hhh-----cCcHHHHHHHHhcCCCcccCchHHHHh
Confidence            112222210   011     112345788899999999999555443

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=99.67  E-value=3.2e-16  Score=152.81  Aligned_cols=130  Identities=25%  Similarity=0.301  Sum_probs=106.2

Q ss_pred             eeeeeCcEEEEEEEeCCCCcEEEEEEeccCch--------hhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEec
Q 048419          337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQ--------QGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDY  408 (653)
Q Consensus       337 ~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~  408 (653)
                      .||+|+||.||+|...  +..+++|.......        ...+.+.+|++++..++|+++.....++...+..++||||
T Consensus         1 ~ig~G~~~~vy~~~~~--~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~   78 (199)
T TIGR03724         1 LIAKGAEAIIYLGDFL--GLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEY   78 (199)
T ss_pred             CCCCCceEEEEEeecC--CccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEE
Confidence            4899999999999863  67899998643211        1235677899999999988766555555566677999999


Q ss_pred             cCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccc
Q 048419          409 VPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKI  484 (653)
Q Consensus       409 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~  484 (653)
                      ++|++|.+++....      .      .++.+++.+|.+||+   .+++|+|++|.||+++ ++.++++|||++..
T Consensus        79 ~~g~~l~~~~~~~~------~------~~~~~i~~~l~~lH~---~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~  138 (199)
T TIGR03724        79 IEGKPLKDVIEEGN------D------ELLREIGRLVGKLHK---AGIVHGDLTTSNIIVR-DDKLYLIDFGLGKY  138 (199)
T ss_pred             ECCccHHHHHhhcH------H------HHHHHHHHHHHHHHH---CCeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence            99999988874421      1      789999999999999   9999999999999999 88999999999875

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=99.66  E-value=3.1e-16  Score=157.91  Aligned_cols=196  Identities=20%  Similarity=0.252  Sum_probs=137.3

Q ss_pred             CCCceeeeeeeecc---------------------------cceeEEEEeccCCCCchhhhhcccccccccchhhhHHHH
Q 048419          385 RHRNLVQLHGWCRK---------------------------QDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKI  437 (653)
Q Consensus       385 ~H~niv~l~g~~~~---------------------------~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i  437 (653)
                      +|||||+++++|.+                           ...+|+||...+. +|..++..+.      .+...+.-+
T Consensus       274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~~~------~s~r~~~~~  346 (598)
T KOG4158|consen  274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWTRH------RSYRTGRVI  346 (598)
T ss_pred             CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhcCC------CchHHHHHH
Confidence            59999999887643                           2357899987754 8999987654      455566678


Q ss_pred             HHHHHHHHHHHHhcCCCCeEecCCCCCcEEE--cCC--CcEEEEeecCcccccCCC-----CCcccccccCCcccCcccc
Q 048419          438 LIGIAQSLLYLHEECNQRVVHRDVKPSNILL--DTY--LNAKLGDFGLAKIYEHGA-----NPQTTHIVGTLGYLAPELT  508 (653)
Q Consensus       438 ~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll--~~~--~~~kl~DfGla~~~~~~~-----~~~~~~~~gt~~y~aPE~~  508 (653)
                      +.|+++|+.|||+   ++|.|||+|++||||  |++  ..+.|+|||.+--.....     ....-..-|...-||||+.
T Consensus       347 laQlLEav~hL~~---hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~  423 (598)
T KOG4158|consen  347 LAQLLEAVTHLHK---HGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIA  423 (598)
T ss_pred             HHHHHHHHHHHHH---ccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhh
Confidence            9999999999999   999999999999999  333  347899999875432210     0111123467789999988


Q ss_pred             ccCC------CCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhccCcCCHHHHHHHHHH
Q 048419          509 RTGK------ATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNL  582 (653)
Q Consensus       509 ~~~~------~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l  582 (653)
                      ....      --.|+|.|+.|.+.||+++...||....+. ......     +.+.        .|...+..+...+.+|
T Consensus       424 ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem-~L~~r~-----Yqe~--------qLPalp~~vpp~~rql  489 (598)
T KOG4158|consen  424 TAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEM-LLDTRT-----YQES--------QLPALPSRVPPVARQL  489 (598)
T ss_pred             hcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchh-eechhh-----hhhh--------hCCCCcccCChHHHHH
Confidence            6432      135899999999999999999999863321 011000     1111        1112223345678899


Q ss_pred             HHHcCCCCCCCCCCHHHHHHHH
Q 048419          583 GLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       583 ~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                      +...|++||.+||+..-....|
T Consensus       490 V~~lL~r~pskRvsp~iAANvl  511 (598)
T KOG4158|consen  490 VFDLLKRDPSKRVSPNIAANVL  511 (598)
T ss_pred             HHHHhcCCccccCCccHHHhHH
Confidence            9999999999999876554433

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=99.60  E-value=8.9e-15  Score=134.92  Aligned_cols=135  Identities=19%  Similarity=0.168  Sum_probs=114.4

Q ss_pred             cceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCC--CceeeeeeeecccceeEEEEeccCC
Q 048419          334 EQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRH--RNLVQLHGWCRKQDELLLVYDYVPN  411 (653)
Q Consensus       334 ~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H--~niv~l~g~~~~~~~~~lV~E~~~~  411 (653)
                      +.+.||+|.++.||++...+  ..+++|.......  ...+..|+..++.++|  .++.+++++....+..++++||+++
T Consensus         2 ~~~~i~~g~~~~v~~~~~~~--~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g   77 (155)
T cd05120           2 SIKLLKGGLTNRVYLLGTKD--EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEG   77 (155)
T ss_pred             cceecccccccceEEEEecC--CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCC
Confidence            45789999999999999854  7899999865433  4678899999999976  5899999998888889999999998


Q ss_pred             CCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccc
Q 048419          412 GSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKI  484 (653)
Q Consensus       412 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~  484 (653)
                      +.+..+            +......++.+++++|.+||.....+++|+|++|+||+++..+.+++.|||.++.
T Consensus        78 ~~~~~~------------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~  138 (155)
T cd05120          78 ETLDEV------------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY  138 (155)
T ss_pred             eecccC------------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence            777654            3455667899999999999985555899999999999999989999999999874

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.58  E-value=1.5e-15  Score=169.82  Aligned_cols=212  Identities=24%  Similarity=0.279  Sum_probs=146.0

Q ss_pred             hcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEec
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDY  408 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~  408 (653)
                      ..+|...+++..|++|.||..+++.+.+.+|+|.- +...    .+.+   ++.....|.+|                  
T Consensus        82 e~df~~IklisngAygavylvrh~~trqrfa~kiN-kq~l----ilRn---ilt~a~npfvv------------------  135 (1205)
T KOG0606|consen   82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKIN-KQNL----ILRN---ILTFAGNPFVV------------------  135 (1205)
T ss_pred             ccccceeEeeccCCCCceeeeeccccccchhhccc-ccch----hhhc---cccccCCccee------------------
Confidence            35788899999999999999999988999999542 2110    0000   22222233322                  


Q ss_pred             cCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCC
Q 048419          409 VPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHG  488 (653)
Q Consensus       409 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~  488 (653)
                         |+-...+...+     .++..        ++.+++|||+   .+|+|||+||+|.+++.-|.+|+.|||+.+.....
T Consensus       136 ---gDc~tllk~~g-----~lPvd--------mvla~Eylh~---ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms  196 (1205)
T KOG0606|consen  136 ---GDCATLLKNIG-----PLPVD--------MVLAVEYLHS---YGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMS  196 (1205)
T ss_pred             ---chhhhhcccCC-----CCcch--------hhHHhHhhcc---CCeecCCCCCCcceeeecccccccchhhhhhhhhh
Confidence               44444444322     23322        2789999999   99999999999999999999999999998753211


Q ss_pred             CC--------------CcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhh
Q 048419          489 AN--------------PQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKEL  554 (653)
Q Consensus       489 ~~--------------~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~  554 (653)
                      ..              -....++||+.|+|||++....|....|-|++|+++||.+-|..||.+..+++-  +-..+...
T Consensus       197 ~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeel--fg~visd~  274 (1205)
T KOG0606|consen  197 LATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEEL--FGQVISDD  274 (1205)
T ss_pred             ccchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHH--Hhhhhhhh
Confidence            00              012345899999999999999999999999999999999999999998765431  11111111


Q ss_pred             hcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHH
Q 048419          555 HLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMR  598 (653)
Q Consensus       555 ~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~  598 (653)
                      .   ...+        .+.....++.+++...|+.+|..|--..
T Consensus       275 i---~wpE--------~dea~p~Ea~dli~~LL~qnp~~Rlgt~  307 (1205)
T KOG0606|consen  275 I---EWPE--------EDEALPPEAQDLIEQLLRQNPLCRLGTG  307 (1205)
T ss_pred             c---cccc--------cCcCCCHHHHHHHHHHHHhChHhhcccc
Confidence            0   0011        1122245677888889999999996433

>cd05119 RIO RIO kinase family, catalytic domain

Probab=99.56  E-value=2.6e-14  Score=137.84  Aligned_cols=137  Identities=22%  Similarity=0.229  Sum_probs=98.0

Q ss_pred             ceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchh--hHHHH----------------------HHHHHHHhhcCCCc--
Q 048419          335 QNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQ--GMKEF----------------------VAEIMSMGRLRHRN--  388 (653)
Q Consensus       335 ~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~--~~~~~----------------------~~E~~~l~~l~H~n--  388 (653)
                      .+.||+|+||.||+|.+. +++.||||++......  ....+                      ..|...+.++.+..  
T Consensus         2 ~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~   80 (187)
T cd05119           2 GGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVP   80 (187)
T ss_pred             CcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCC
Confidence            467999999999999987 6899999998653211  11111                      34555566664432  


Q ss_pred             eeeeeeeecccceeEEEEeccCCCCchhh-hhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEE
Q 048419          389 LVQLHGWCRKQDELLLVYDYVPNGSLDKL-LFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNIL  467 (653)
Q Consensus       389 iv~l~g~~~~~~~~~lV~E~~~~gsL~~~-l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIl  467 (653)
                      +.+.++.    ...++||||++++.+... +....      .. .+...++.+++.++.++|..  ++|+|+||||+||+
T Consensus        81 ~~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~------~~-~~~~~~~~~~~~~l~~lh~~--~~ivH~Dl~p~Nil  147 (187)
T cd05119          81 VPKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR------LL-EDPEELYDQILELMRKLYRE--AGLVHGDLSEYNIL  147 (187)
T ss_pred             CCceEec----CCCEEEEEEeCCCCccChhhhhhh------hc-ccHHHHHHHHHHHHHHHhhc--cCcCcCCCChhhEE
Confidence            3334332    235899999999654322 21111      11 56788999999999999973  68999999999999


Q ss_pred             EcCCCcEEEEeecCccccc
Q 048419          468 LDTYLNAKLGDFGLAKIYE  486 (653)
Q Consensus       468 l~~~~~~kl~DfGla~~~~  486 (653)
                      ++ ++.++|+|||.+....
T Consensus       148 i~-~~~~~liDfg~a~~~~  165 (187)
T cd05119         148 VD-DGKVYIIDVPQAVEID  165 (187)
T ss_pred             EE-CCcEEEEECccccccc
Confidence            99 8999999999997543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=99.55  E-value=3.3e-14  Score=142.28  Aligned_cols=135  Identities=21%  Similarity=0.228  Sum_probs=105.5

Q ss_pred             ceeee-eeCcEEEEEEEeCCCCcEEEEEEeccCc-------------hhhHHHHHHHHHHHhhcCCCce--eeeeeeecc
Q 048419          335 QNLVG-SGGFGRVYRGLMPSLGLEVAIKRIGHNS-------------QQGMKEFVAEIMSMGRLRHRNL--VQLHGWCRK  398 (653)
Q Consensus       335 ~~~LG-~G~fg~Vy~~~~~~~~~~vavK~~~~~~-------------~~~~~~~~~E~~~l~~l~H~ni--v~l~g~~~~  398 (653)
                      ...|| .||.|+||++...  +..++||++....             ......+.+|++++.+|+|+++  ++.++++..
T Consensus        36 ~~~lg~~~g~gtv~~v~~~--~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~  113 (239)
T PRK01723         36 ARVVGSAKGRGTTWFVQTP--GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVV  113 (239)
T ss_pred             CceeecCCCCccEEEEEeC--CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeee
Confidence            45788 8999999999885  6789999885321             1223467889999999998875  667776544


Q ss_pred             cc----eeEEEEeccCC-CCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCc
Q 048419          399 QD----ELLLVYDYVPN-GSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLN  473 (653)
Q Consensus       399 ~~----~~~lV~E~~~~-gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~  473 (653)
                      ..    ..++|+|++++ .+|.+++...      .++.    ..+.+|+.+|.+||+   .+|+|+||||.|||++.++.
T Consensus       114 ~~~~~~~~~lV~e~l~G~~~L~~~l~~~------~l~~----~~~~~i~~~l~~lH~---~GI~HrDlkp~NILv~~~~~  180 (239)
T PRK01723        114 RHGLFYRADILIERIEGARDLVALLQEA------PLSE----EQWQAIGQLIARFHD---AGVYHADLNAHNILLDPDGK  180 (239)
T ss_pred             ecCcceeeeEEEEecCCCCCHHHHHhcC------CCCH----HHHHHHHHHHHHHHH---CCCCCCCCCchhEEEcCCCC
Confidence            32    23599999997 6888887542      1333    246789999999999   99999999999999999899


Q ss_pred             EEEEeecCccc
Q 048419          474 AKLGDFGLAKI  484 (653)
Q Consensus       474 ~kl~DfGla~~  484 (653)
                      ++|+|||.++.
T Consensus       181 v~LIDfg~~~~  191 (239)
T PRK01723        181 FWLIDFDRGEL  191 (239)
T ss_pred             EEEEECCCccc
Confidence            99999998875

>cd06903 lectin_EMP46_EMP47 EMP46 and EMP47 type 1 transmembrane proteins, N-terminal lectin domain

Probab=99.50  E-value=1.5e-12  Score=126.62  Aligned_cols=186  Identities=15%  Similarity=0.133  Sum_probs=123.2

Q ss_pred             CCeEEecceEecCCCcEEecCCCCCceEEEEcCCCeecccCCCCceeeeEEEEEEEEecCCCCCCCCceEEEEecCCCCC
Q 048419           19 ANLSLEGAAYISTSGILTVTNKSEGLIGHALYPNPLRFKTSNKSVAIDFRTNFVFSILPKYPDLGGQGLAFIIISTNRPE   98 (653)
Q Consensus        19 ~~l~~~g~a~~~~~g~l~Lt~~~~~~~Gr~~y~~pi~~~~~~~~~~~sF~t~F~f~i~~~~~~~~gdGlaF~l~~~~~~~   98 (653)
                      .+..+.|+|.+. ++.|+||++ .++.|.+|-+.|+++.+       +|+.+|+|+|.... ..+||||||.++..... 
T Consensus        21 ~~W~~~G~t~v~-~~~IrLTp~-~s~~G~iWs~~pl~~~~-------~w~ie~~Fri~G~~-~~~gdGla~W~t~~~~~-   89 (215)
T cd06903          21 PNWQTSGNPKLE-SGRIILTPP-GNQRGSLWLKKPLSLKD-------EWTIEWTFRSTGPE-GRSGGGLNFWLVKDGNA-   89 (215)
T ss_pred             CCeEEcCcEEee-CCeEEECCC-CCceEeEeeCCcCCCCC-------CEEEEEEEEecccC-CcCCCEEEEEEECCCcc-
Confidence            579999999887 889999999 99999999999999853       59999999998653 26899999999965432 


Q ss_pred             CCCCC-ccccCCCcccCCCCCCCCceEEEEeecccccccCCCCCCeeeEec-CCCCcCCcccCccccCCCCccccc-cCC
Q 048419           99 NCLAN-QFLGLPNITMSSSTKFSTRMLAVEFDIIQNTELIDINDNHVGIDI-SSLISSASEPASYYSGNNHRIPIL-LRS  175 (653)
Q Consensus        99 ~~~~g-~~lG~~~~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~~~Hvgid~-ns~~s~~~~~~~~~~~~~~~~~~~-l~~  175 (653)
                        .+| ..+|-.+.-+.         +||.|||+.|.   .   ..|-+-+ ++-.......-  .....+...+. ...
T Consensus        90 --~~g~~~fG~~~~f~G---------l~I~~Dt~~n~---~---p~i~~~~NDGt~~yd~~~d--~~~~~g~C~~~~rn~  150 (215)
T cd06903          90 --DVGTSSIYGPSKFDG---------LQLLIDNNGGS---G---GSLRGFLNDGSKDYKNEDV--DSLAFGSCLFAYQDS  150 (215)
T ss_pred             --cCCccccCCCCCCcE---------EEEEEECCCCC---C---ceEEEEECCCCeeccccCC--cccccceeeEeccCC
Confidence              122 33444333222         89999999873   1   2333333 22221111110  00000111122 345


Q ss_pred             CCceEEEEEecCCceEEEEEEeeCCCCCCCCCcee-eeecCCcccc-cceEEeEecccCcccceeeecceee
Q 048419          176 GDPIQAWVDYSSQEMLINVSICPLGVPKPYRPLIS-LPIDLSSVID-EYMYTGFSASTGLITASHNVHGWSI  245 (653)
Q Consensus       176 g~~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~~l~-~~~dL~~~l~-~~~~vGFsastg~~~~~~~i~sWsf  245 (653)
                      +.+.+++|.|......|+|.+..  .    . .+. ..+.    || .-.|+||||+||...+.|.|++-..
T Consensus       151 ~~p~~iri~Y~~~~~~l~v~vd~--~----~-Cf~~~~v~----lP~~~y~fGiSAaTg~~~d~hdIl~~~~  211 (215)
T cd06903         151 GVPSTIRLSYDALNSLFKVQVDN--R----L-CFQTDKVQ----LPQGGYRFGITAANADNPESFEILKLKV  211 (215)
T ss_pred             CCCEEEEEEEECCCCEEEEEECC--C----E-EEecCCee----cCCCCCEEEEEEcCCCCCCcEEEEEEEE
Confidence            77899999998866788888742  1    1 111 1222    45 5577999999999889999997554

EMP46 and EMP47, N-terminal carbohydrate recognition domain. EMP46 and EMP47 are fungal type-I transmembrane proteins that cycle between the endoplasmic reticulum and the golgi apparatus and are thought to function as cargo receptors that transport newly synthesized glycoproteins. EMP47 is a receptor for EMP46 responsible for the selective transport of EMP46 by forming hetero-oligomerization between the two proteins. EMP46 and EMP47 have an N-terminal lectin-like carbohydrate recognition domain (represented by this alignment model) as well as a C-terminal transmembrane domain. EMP46 and EMP47 are 45% sequence-identical to one another and have sequence homology to a class of intracellular lectins defined by ERGIC-53 and VIP36. L-type lectins have a dome-shaped beta-barrel carbohydrate recognition domain with a curved seven-stranded beta-sheet referred to as the "front face" and a flat s

>PF03388 Lectin_leg-like: Legume-like lectin family; InterPro: IPR005052 Lectins are structurally diverse proteins that bind to specific carbohydrates

Probab=99.50  E-value=8e-13  Score=130.75  Aligned_cols=197  Identities=20%  Similarity=0.261  Sum_probs=122.0

Q ss_pred             CCeEEecceEecCCCcEEecCCCCCceEEEEcCCCeecccCCCCceeeeEEEEEEEEecCCCCCCCCceEEEEecCCCCC
Q 048419           19 ANLSLEGAAYISTSGILTVTNKSEGLIGHALYPNPLRFKTSNKSVAIDFRTNFVFSILPKYPDLGGQGLAFIIISTNRPE   98 (653)
Q Consensus        19 ~~l~~~g~a~~~~~g~l~Lt~~~~~~~Gr~~y~~pi~~~~~~~~~~~sF~t~F~f~i~~~~~~~~gdGlaF~l~~~~~~~   98 (653)
                      .+..+.|+|.+. ++.|+||++..++.|.+|.+.|++.        .+|+.+|+|+|........||||||+++..... 
T Consensus        22 ~~W~~~G~t~i~-~~~IrLTp~~~~~~G~iws~~~~~~--------~~w~i~~~Fri~g~~~~~~g~G~a~W~t~~~~~-   91 (229)
T PF03388_consen   22 PNWDIGGSTVIT-DNFIRLTPDRQSQSGSIWSRKPIPF--------DNWEIEFTFRISGQEKGLGGDGMAFWYTKDPGS-   91 (229)
T ss_dssp             TTEEEEET-EEE-SSEEEEE-SSTTEEEEEEESS-BEE--------SEEEEEEEEEEESS-SSS-S-EEEEEEESSSSS-
T ss_pred             CCEEECCeEEec-CCEEEECCCcccCEEEEEEcCCCCc--------cCEEEEEEEEEeccccCcCCCeEEEEEEcCccc-
Confidence            478999999887 8999999999999999999999998        279999999998875566899999999875432 


Q ss_pred             CCCCCccccCCCcccCCCCCCCCceEEEEeecccccccC-CCCCCeeeEecCC-CCcCCcccCccccCCCCccccccC-C
Q 048419           99 NCLANQFLGLPNITMSSSTKFSTRMLAVEFDIIQNTELI-DINDNHVGIDISS-LISSASEPASYYSGNNHRIPILLR-S  175 (653)
Q Consensus        99 ~~~~g~~lG~~~~~~~~~~~~~~~~vaVEFDt~~n~~~~-d~~~~Hvgid~ns-~~s~~~~~~~~~~~~~~~~~~~l~-~  175 (653)
                         .|..+|..+.-+.         +||=||||.|.+-. .-..+.|.+-+|- -.+.....-+. ....+...+..+ .
T Consensus        92 ---~G~~fG~~~~f~G---------l~i~idt~~N~~~~~~~~~p~i~~~~NDGt~~~~~~~dg~-~~~~~~C~~~~rn~  158 (229)
T PF03388_consen   92 ---DGPVFGGPDKFDG---------LGIFIDTYDNDEGGHKRGFPYISAMLNDGTKSYDHDNDGK-DQSLGSCSADYRNS  158 (229)
T ss_dssp             ---SCSBTTB-SS-EE---------EEEEEEES-TTCTTCTSTSSEEEEEEEESSS---GGGTTT-TT-SEEEE---BTE
T ss_pred             ---cccccCCCcccce---------EEEEEEcccCCCcccccccceEEEEecCCCccccccccCc-ccccccceeccCcC
Confidence               5566676554333         89999999996321 1234566555542 11111111000 000111223333 3


Q ss_pred             CCceEEEEEecCCceEEEEEEeeC--CCCCCCCCceee-eecCCcccccceEEeEecccCcccceeeeccee
Q 048419          176 GDPIQAWVDYSSQEMLINVSICPL--GVPKPYRPLISL-PIDLSSVIDEYMYTGFSASTGLITASHNVHGWS  244 (653)
Q Consensus       176 g~~~~~~I~Y~~~~~~l~v~~~~~--~~~~~~~~~l~~-~~dL~~~l~~~~~vGFsastg~~~~~~~i~sWs  244 (653)
                      +...+++|.|...  .+.|.+...  .....-...+.. .|    .||+..|+||||+||...+.|.|++-.
T Consensus       159 ~~p~~~ri~Y~~~--~l~v~id~~~~~~~~~~~~Cf~~~~v----~LP~~~yfGvSA~Tg~~~d~hdi~s~~  224 (229)
T PF03388_consen  159 DVPTRIRISYSKN--TLTVSIDSNYLKNQDDWELCFTTDGV----DLPEGYYFGVSAATGELSDNHDILSVK  224 (229)
T ss_dssp             SSEEEEEEEEETT--EEEEEEETSCCSECCTTEEEEEESTE----EGGSSBEEEEEEEESSSGGEEEEEEEE
T ss_pred             CCCEEEEEEEECC--eEEEEEecccccCCcCCcEEEEcCCe----ecCCCCEEEEEecCCCCCCcEEEEEEE
Confidence            5677999999865  466666521  111111112221 22    367888999999999999999998743

This family includes the VIP36 and ERGIC-53 lectins. These two proteins were the first members of the family of animal lectins similar to the leguminous plant lectins []. The alignment for this family is towards the N terminus, where the similarity of VIP36 and ERGIC-53 is greatest. Although they have been identified as a family of animal lectins, this alignment also includes yeast sequences[]. ERGIC-53 is a 53kDa protein, localised to the intermediate region between the endoplasmic reticulum and the Golgi apparatus (ER-Golgi-Intermediate Compartment, ERGIC). It was identified as a calcium-dependent, mannose-specific lectin []. Its dysfunction has been associated with combined factors V and VIII deficiency, suggesting an important and substrate-specific role for ERGIC-53 in the glycoprotein-secreting pathway [,]. The L-type lectin-like domain has an overall globular shape composed of a beta-sandwich of two major twisted antiparallel beta-sheets. The beta-sandwich comprises a major concave beta-sheet and a minor convex beta-sheet, in a variation of the jelly roll fold [, , , ]. ; GO: 0016020 membrane; PDB: 3A4U_A 3LCP_B 2A6Z_A 2A71_C 2A70_B 2A6Y_A 2A6X_A 2A6W_B 2A6V_B 2E6V_B ....

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.47  E-value=4.8e-15  Score=165.94  Aligned_cols=256  Identities=25%  Similarity=0.272  Sum_probs=189.2

Q ss_pred             CcCcceeeeeeCcEEEEEEEeCC-CCcEEEEEEeccCc--hhhHHHHHHHHHHHhhcC-CCceeeeeeeecccceeEEEE
Q 048419          331 GFGEQNLVGSGGFGRVYRGLMPS-LGLEVAIKRIGHNS--QQGMKEFVAEIMSMGRLR-HRNLVQLHGWCRKQDELLLVY  406 (653)
Q Consensus       331 ~f~~~~~LG~G~fg~Vy~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lV~  406 (653)
                      .|...+.||+|.|+.|-...... ....+|+|.+....  ....+....|..+-..+. |+|++++++.....+..+++.
T Consensus        21 ~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~~  100 (601)
T KOG0590|consen   21 QYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLSL  100 (601)
T ss_pred             cccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCccccccc
Confidence            45556779999999998877633 34557777765543  233344455777777776 999999999999999999999


Q ss_pred             eccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHH-hcCCCCeEecCCCCCcEEEcCCC-cEEEEeecCccc
Q 048419          407 DYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLH-EECNQRVVHRDVKPSNILLDTYL-NAKLGDFGLAKI  484 (653)
Q Consensus       407 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH-~~~~~~ivH~Dlkp~NIll~~~~-~~kl~DfGla~~  484 (653)
                      ||..++++.+-+....   ....+....-..+.|+..++.|+| .   .++.|+|+||+|.+++..+ ..+++|||+|..
T Consensus       101 ~~s~g~~~f~~i~~~~---~~~~~~~~~~~~~~ql~s~l~~~H~~---~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~  174 (601)
T KOG0590|consen  101 SYSDGGSLFSKISHPD---STGTSSSSASRYLPQLNSGLSYLHPE---NGVTHRDIKPSNSLLDESGSALKIADFGLATA  174 (601)
T ss_pred             CcccccccccccccCC---ccCCCCcchhhhhhhhccCccccCcc---cccccCCCCCccchhccCCCcccCCCchhhcc
Confidence            9999999998883221   123556667789999999999999 7   8999999999999999999 999999999997


Q ss_pred             ccC--CCCCccccccc-CCcccCccccccC-CCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccch
Q 048419          485 YEH--GANPQTTHIVG-TLGYLAPELTRTG-KATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEI  560 (653)
Q Consensus       485 ~~~--~~~~~~~~~~g-t~~y~aPE~~~~~-~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~  560 (653)
                      +..  +........+| ++.|+|||...+. ...+..|+||.|+++.-+++|..|++........ ...|....   +..
T Consensus       175 ~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~-~~~~~~~~---~~~  250 (601)
T KOG0590|consen  175 YRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGR-YSSWKSNK---GRF  250 (601)
T ss_pred             ccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCcccccccccc-ceeecccc---ccc
Confidence            765  33344455678 9999999998874 4567899999999999999999999865443211 11111110   000


Q ss_pred             hHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 048419          561 TQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEF  603 (653)
Q Consensus       561 ~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  603 (653)
                      ....       -........++..+|+..+|..|.+.+++...
T Consensus       251 ~~~~-------~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d  286 (601)
T KOG0590|consen  251 TQLP-------WNSISDQAHDLLHKILKENPSNRLSIEELKLD  286 (601)
T ss_pred             ccCc-------cccCChhhhhcccccccCCchhcccccccccc
Confidence            0000       01123456677888888999999999887653

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=99.46  E-value=7.2e-14  Score=138.06  Aligned_cols=206  Identities=24%  Similarity=0.354  Sum_probs=142.9

Q ss_pred             HHHHhhcCCCceeeeeeeecccc-----eeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcC
Q 048419          378 IMSMGRLRHRNLVQLHGWCRKQD-----ELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEEC  452 (653)
Q Consensus       378 ~~~l~~l~H~niv~l~g~~~~~~-----~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~  452 (653)
                      ..-|-++-|.|||+++.|+.+..     +..++.|||..|+|..+|.+.... .+.+....-.+|+.||..||.|||+ |
T Consensus       118 FdnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~-~~a~~~~~wkkw~tqIlsal~yLhs-~  195 (458)
T KOG1266|consen  118 FDNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKN-QKALFQKAWKKWCTQILSALSYLHS-C  195 (458)
T ss_pred             HHHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHh-hhhhhHHHHHHHHHHHHhhhhhhhc-c
Confidence            34556677999999999986543     578999999999999999875432 4567777778999999999999998 6


Q ss_pred             CCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCC----CCcccccccCCcccCccccccCCCCCccceeehHHHHHH
Q 048419          453 NQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGA----NPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLE  528 (653)
Q Consensus       453 ~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~e  528 (653)
                      ..+|+|+++..+-|++..++-+|++---- .......    ........+-++|.+||+-...+.+..+|||+||+..+|
T Consensus       196 ~PpiihgnlTc~tifiq~ngLIkig~~ap-~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAle  274 (458)
T KOG1266|consen  196 DPPIIHGNLTCDTIFIQHNGLIKIGSVAP-DSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALE  274 (458)
T ss_pred             CCccccCCcchhheeecCCceEEecccCc-cccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHH
Confidence            68999999999999999999888753211 1110000    011122346789999998877788889999999999999


Q ss_pred             HHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          529 VACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       529 lltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                      |.-|..--........           .+..+...+- .+      +-..-..++.+|++..|..||+|++++.+.
T Consensus       275 mailEiq~tnseS~~~-----------~ee~ia~~i~-~l------en~lqr~~i~kcl~~eP~~rp~ar~llfHp  332 (458)
T KOG1266|consen  275 MAILEIQSTNSESKVE-----------VEENIANVII-GL------ENGLQRGSITKCLEGEPNGRPDARLLLFHP  332 (458)
T ss_pred             HHHheeccCCCcceee-----------hhhhhhhhee-ec------cCccccCcCcccccCCCCCCcchhhhhcCc
Confidence            9887643221110000           0001111000 00      001123566789999999999999998654

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=99.38  E-value=3.2e-12  Score=138.93  Aligned_cols=141  Identities=18%  Similarity=0.202  Sum_probs=100.0

Q ss_pred             ceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhH----------------------------------------HHH
Q 048419          335 QNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGM----------------------------------------KEF  374 (653)
Q Consensus       335 ~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~----------------------------------------~~~  374 (653)
                      .+.||.|++|.||+|++. +|+.||||+.+....+..                                        -.|
T Consensus       122 ~~plasaSigQVh~A~l~-~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf  200 (437)
T TIGR01982       122 EKPLAAASIAQVHRARLV-DGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDL  200 (437)
T ss_pred             CcceeeeehhheEEEEec-CCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCH
Confidence            368999999999999986 589999999865421110                                        024


Q ss_pred             HHHHHHHhhcC----CCceeeeeeeec-ccceeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHH-HHHHH
Q 048419          375 VAEIMSMGRLR----HRNLVQLHGWCR-KQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQ-SLLYL  448 (653)
Q Consensus       375 ~~E~~~l~~l~----H~niv~l~g~~~-~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~-~L~yL  448 (653)
                      ..|+..+.+++    |.+-+.+-..+. -.+..+|||||++|++|.++......    ..   .+.+++.+++. .+..+
T Consensus       201 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~----~~---~~~~ia~~~~~~~l~ql  273 (437)
T TIGR01982       201 RREAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEA----GL---DRKALAENLARSFLNQV  273 (437)
T ss_pred             HHHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhc----CC---CHHHHHHHHHHHHHHHH
Confidence            45665555552    333333333332 23456999999999999887643211    11   34557777666 46788


Q ss_pred             HhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccccc
Q 048419          449 HEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE  486 (653)
Q Consensus       449 H~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~  486 (653)
                      |.   .+++|+|++|.||+++.++.++++|||++..+.
T Consensus       274 ~~---~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~  308 (437)
T TIGR01982       274 LR---DGFFHADLHPGNIFVLKDGKIIALDFGIVGRLS  308 (437)
T ss_pred             Hh---CCceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence            88   899999999999999999999999999998654

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.36  E-value=5.9e-13  Score=142.72  Aligned_cols=249  Identities=22%  Similarity=0.250  Sum_probs=184.1

Q ss_pred             cCcCcceeeee--eCcEEEEEEEe--CCCCcEEEEEEeccC--chhhHHHHHHHHHHHhhcC-CCceeeeeeeeccccee
Q 048419          330 KGFGEQNLVGS--GGFGRVYRGLM--PSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLR-HRNLVQLHGWCRKQDEL  402 (653)
Q Consensus       330 ~~f~~~~~LG~--G~fg~Vy~~~~--~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~  402 (653)
                      ..|...+.+|.  |.+|.||.+..  ..++..+|+|+-+..  .......-.+|+....+++ |+|.++....+...+..
T Consensus       114 ~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~l  193 (524)
T KOG0601|consen  114 QRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGIL  193 (524)
T ss_pred             hhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcc
Confidence            34566788999  99999999998  788899999985432  2233334456777777774 99999988889999999


Q ss_pred             EEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHH----HHHHHHhcCCCCeEecCCCCCcEEEcCC-CcEEEE
Q 048419          403 LLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQ----SLLYLHEECNQRVVHRDVKPSNILLDTY-LNAKLG  477 (653)
Q Consensus       403 ~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~----~L~yLH~~~~~~ivH~Dlkp~NIll~~~-~~~kl~  477 (653)
                      ++-+|+| +.+|..+.+...    ..++....+..+.+..+    ||.++|.   .+++|-|+||.||++..+ ...+++
T Consensus       194 fiqtE~~-~~sl~~~~~~~~----~~~p~~~l~~~~~~~~~~~~~al~~~hs---~~~~~~~~kp~~i~~~~~~~s~~~~  265 (524)
T KOG0601|consen  194 FIQTELC-GESLQSYCHTPC----NFLPDNLLWNSLRDWLSRDVTALSHLHS---NNIVHDDLKPANIFTTSDWTSCKLT  265 (524)
T ss_pred             eeeeccc-cchhHHhhhccc----ccCCchhhhhHHhhhhhcccccccccCC---CcccccccchhheecccccceeecC
Confidence            9999998 478888887653    34677777888888888    9999999   999999999999999999 889999


Q ss_pred             eecCcccccCCCCC----cccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHh
Q 048419          478 DFGLAKIYEHGANP----QTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKE  553 (653)
Q Consensus       478 DfGla~~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~  553 (653)
                      |||+...+......    ......|...|++||..+ +.++.+.|+|++|.+++|..++-.+........        |.
T Consensus       266 df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~-~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~--------W~  336 (524)
T KOG0601|consen  266 DFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLN-GLATFASDIFSLGEVILEAILGSHLPSVGKNSS--------WS  336 (524)
T ss_pred             CcceeEEccCCccccceeeeecCCCCceEeChhhhc-cccchHhhhcchhhhhHhhHhhcccccCCCCCC--------cc
Confidence            99999887654321    112235778899999875 578889999999999999999877655432110        11


Q ss_pred             hhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 048419          554 LHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVE  602 (653)
Q Consensus       554 ~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~  602 (653)
                      ......+..       ++...-...+...+..+++.+|..|++.+.+..
T Consensus       337 ~~r~~~ip~-------e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~  378 (524)
T KOG0601|consen  337 QLRQGYIPL-------EFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTA  378 (524)
T ss_pred             ccccccCch-------hhhcCcchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence            111111111       111111233444888899999999999888765

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=99.27  E-value=4.4e-11  Score=129.53  Aligned_cols=170  Identities=19%  Similarity=0.207  Sum_probs=129.9

Q ss_pred             EEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEeccCCCCchhhhhcccccccc
Q 048419          348 RGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRK  427 (653)
Q Consensus       348 ~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~  427 (653)
                      .|..+.++.+|.|...+...........+-++.|+.|+||||++++......+.+|||+|-+.  -|..++.+.      
T Consensus        30 ~~t~k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~l------  101 (690)
T KOG1243|consen   30 DGTRKADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKEL------  101 (690)
T ss_pred             ccceeccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHHh------
Confidence            456667788999998877666555667788899999999999999999999999999999873  566666543      


Q ss_pred             cchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCCCCcccccccCCcccCccc
Q 048419          428 LLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL  507 (653)
Q Consensus       428 ~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~  507 (653)
                        ......-.+.||+.||.|||+.  .+++|++|.-+.|++++.|..||++|.++........ ......--..|..|+.
T Consensus       102 --~~~~v~~Gl~qIl~AL~FL~~d--~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~-~~~~~~~~~s~~~P~~  176 (690)
T KOG1243|consen  102 --GKEEVCLGLFQILAALSFLNDD--CNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA-PAKSLYLIESFDDPEE  176 (690)
T ss_pred             --HHHHHHHHHHHHHHHHHHHhcc--CCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc-ccccchhhhcccChhh
Confidence              2334445788999999999974  6899999999999999999999999998865432211 1111122235677775


Q ss_pred             cccCCCCCccceeehHHHHHHHHhC
Q 048419          508 TRTGKATTSTDVYSYGILMLEVACG  532 (653)
Q Consensus       508 ~~~~~~~~ksDV~s~Gvvl~elltG  532 (653)
                      +....  ...|.|.|||+++|++.|
T Consensus       177 ~~~s~--~s~D~~~Lg~li~el~ng  199 (690)
T KOG1243|consen  177 IDPSE--WSIDSWGLGCLIEELFNG  199 (690)
T ss_pred             cCccc--cchhhhhHHHHHHHHhCc
Confidence            53322  457999999999999999

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=99.27  E-value=1e-11  Score=136.65  Aligned_cols=145  Identities=17%  Similarity=0.181  Sum_probs=94.2

Q ss_pred             CcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhh----------------------------------HH----
Q 048419          331 GFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQG----------------------------------MK----  372 (653)
Q Consensus       331 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~----------------------------------~~----  372 (653)
                      .|+. +.||+|++|.||+|+++++|+.||||+.+..-.+.                                  .+    
T Consensus       121 ~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~  199 (537)
T PRK04750        121 DFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHD  199 (537)
T ss_pred             hcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHH
Confidence            4665 78999999999999998779999999996542110                                  11    


Q ss_pred             --HHHHHHHHHhhcC----CCceeeeeeeecc-cceeEEEEeccCCCCchhhh--hcccccccccchhhhHHHHHHHHHH
Q 048419          373 --EFVAEIMSMGRLR----HRNLVQLHGWCRK-QDELLLVYDYVPNGSLDKLL--FDKDHKLRKLLTWDQRYKILIGIAQ  443 (653)
Q Consensus       373 --~~~~E~~~l~~l~----H~niv~l~g~~~~-~~~~~lV~E~~~~gsL~~~l--~~~~~~~~~~l~~~~~~~i~~~ia~  443 (653)
                        +|..|+..+.+++    +.+.+.+-..+.+ ....+|||||++|+.|.++-  ...+. ..+.+.......++.|+  
T Consensus       200 ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~-d~~~la~~~v~~~~~Qi--  276 (537)
T PRK04750        200 ELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGT-DMKLLAERGVEVFFTQV--  276 (537)
T ss_pred             hhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCC-CHHHHHHHHHHHHHHHH--
Confidence              1344444444442    3333333333322 33568999999999997742  22110 01123332333333333  


Q ss_pred             HHHHHHhcCCCCeEecCCCCCcEEEcCCC----cEEEEeecCcccccC
Q 048419          444 SLLYLHEECNQRVVHRDVKPSNILLDTYL----NAKLGDFGLAKIYEH  487 (653)
Q Consensus       444 ~L~yLH~~~~~~ivH~Dlkp~NIll~~~~----~~kl~DfGla~~~~~  487 (653)
                           ..   .+++|+|+||.||+++.++    .+++.|||++..+..
T Consensus       277 -----f~---~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~  316 (537)
T PRK04750        277 -----FR---DGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK  316 (537)
T ss_pred             -----Hh---CCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence                 33   7999999999999999888    999999999987643

>cd05151 ChoK Choline Kinase (ChoK)

Probab=99.24  E-value=4.1e-11  Score=113.35  Aligned_cols=131  Identities=18%  Similarity=0.146  Sum_probs=96.2

Q ss_pred             ceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCcee-eeeeeecccceeEEEEeccCCCC
Q 048419          335 QNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLV-QLHGWCRKQDELLLVYDYVPNGS  413 (653)
Q Consensus       335 ~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv-~l~g~~~~~~~~~lV~E~~~~gs  413 (653)
                      .+.|+.|.++.||++...  +..+++|....... ....+..|+..++.+.+.+++ +++.+..  ...++||||+++.+
T Consensus         3 ~~~l~~G~~~~vy~~~~~--~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~~--~~~~lv~e~i~G~~   77 (170)
T cd05151           3 ISPLKGGMTNKNYRVEVA--NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFDP--ETGVLITEFIEGSE   77 (170)
T ss_pred             eeecCCcccCceEEEEEC--CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEeC--CCCeEEEEecCCCc
Confidence            467899999999999875  67899999754432 223467899999988765544 4444433  23579999999988


Q ss_pred             chhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcC--CCCeEecCCCCCcEEEcCCCcEEEEeecCccc
Q 048419          414 LDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEEC--NQRVVHRDVKPSNILLDTYLNAKLGDFGLAKI  484 (653)
Q Consensus       414 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~--~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~  484 (653)
                      +....          .   ....++.+++++|..||+..  ...++|+|++|.||+++ ++.++++|||.+..
T Consensus        78 l~~~~----------~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~  136 (170)
T cd05151          78 LLTED----------F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM  136 (170)
T ss_pred             ccccc----------c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence            76430          0   11245678999999999932  12369999999999999 66899999998763

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=99.12  E-value=8.3e-10  Score=105.91  Aligned_cols=137  Identities=17%  Similarity=0.126  Sum_probs=97.9

Q ss_pred             eeeeeeCcEEEEEEEeCC------CCcEEEEEEeccCc-----h-----------------hhHHHHH----HHHHHHhh
Q 048419          336 NLVGSGGFGRVYRGLMPS------LGLEVAIKRIGHNS-----Q-----------------QGMKEFV----AEIMSMGR  383 (653)
Q Consensus       336 ~~LG~G~fg~Vy~~~~~~------~~~~vavK~~~~~~-----~-----------------~~~~~~~----~E~~~l~~  383 (653)
                      ..||.|--+.||.|...+      .+..+|||+.+...     .                 ...+.+.    +|...|++
T Consensus         3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r   82 (197)
T cd05146           3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR   82 (197)
T ss_pred             CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence            468999999999998653      35789999874321     0                 0122233    78899999


Q ss_pred             cCC--CceeeeeeeecccceeEEEEeccCCCCchh-hhhcccccccccchhhhHHHHHHHHHHHHHHH-HhcCCCCeEec
Q 048419          384 LRH--RNLVQLHGWCRKQDELLLVYDYVPNGSLDK-LLFDKDHKLRKLLTWDQRYKILIGIAQSLLYL-HEECNQRVVHR  459 (653)
Q Consensus       384 l~H--~niv~l~g~~~~~~~~~lV~E~~~~gsL~~-~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yL-H~~~~~~ivH~  459 (653)
                      +..  -++.+++++    ..-+|||||+.+..+.. .+.+      ..++..+..++..+++.+|..| |+   .+++|+
T Consensus        83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd------~~~~~~~~~~i~~~i~~~l~~l~H~---~glVHG  149 (197)
T cd05146          83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKD------AKLNDEEMKNAYYQVLSMMKQLYKE---CNLVHA  149 (197)
T ss_pred             HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhc------cccCHHHHHHHHHHHHHHHHHHHHh---CCeecC
Confidence            853  455566654    45689999997654422 2221      1234455667889999999999 77   899999


Q ss_pred             CCCCCcEEEcCCCcEEEEeecCccccc
Q 048419          460 DVKPSNILLDTYLNAKLGDFGLAKIYE  486 (653)
Q Consensus       460 Dlkp~NIll~~~~~~kl~DfGla~~~~  486 (653)
                      ||++.||+++ ++.+.|+|||.+....
T Consensus       150 DLs~~NIL~~-~~~v~iIDF~qav~~~  175 (197)
T cd05146         150 DLSEYNMLWH-DGKVWFIDVSQSVEPT  175 (197)
T ss_pred             CCCHHHEEEE-CCcEEEEECCCceeCC
Confidence            9999999997 4679999999887654

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.12  E-value=4.4e-11  Score=128.49  Aligned_cols=253  Identities=20%  Similarity=0.172  Sum_probs=178.0

Q ss_pred             HHHhhcCcCcceeeeeeCcEEEEEEEeC-CCCcEEEEEEeccCchhhHH--HHHHHHHHHhhc-CCCceeeeeeeecccc
Q 048419          325 LASVTKGFGEQNLVGSGGFGRVYRGLMP-SLGLEVAIKRIGHNSQQGMK--EFVAEIMSMGRL-RHRNLVQLHGWCRKQD  400 (653)
Q Consensus       325 l~~at~~f~~~~~LG~G~fg~Vy~~~~~-~~~~~vavK~~~~~~~~~~~--~~~~E~~~l~~l-~H~niv~l~g~~~~~~  400 (653)
                      ...-+.+|..+..||.|.|+.|++...+ .++..|++|.+.+.......  .-+.|+.+...+ .|.++++....+...+
T Consensus       260 ~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r  339 (524)
T KOG0601|consen  260 TSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLR  339 (524)
T ss_pred             ceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccc
Confidence            4455567889999999999999998765 67889999988654322222  223566666665 4888888777777777


Q ss_pred             eeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCC-CcEEEEee
Q 048419          401 ELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTY-LNAKLGDF  479 (653)
Q Consensus       401 ~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~-~~~kl~Df  479 (653)
                      ..++=-|||.++++...+.-     ...+....++++..|++.++.++|+   ..++|+|+||+||++..+ +..+++||
T Consensus       340 ~~~ip~e~~~~~s~~l~~~~-----~~~~d~~~~~~~~~q~~~~l~~i~s---~~~~~~d~~psni~i~~~~~~~~~~~~  411 (524)
T KOG0601|consen  340 QGYIPLEFCEGGSSSLRSVT-----SQMLDEDPRLRLTAQILTALNVIHS---KLFVHLDVKPSNILISNDGFFSKLGDF  411 (524)
T ss_pred             cccCchhhhcCcchhhhhHH-----HHhcCcchhhhhHHHHHhccccccc---hhhhcccccccceeeccchhhhhcccc
Confidence            77899999999988766522     2347778889999999999999999   999999999999999775 88999999


Q ss_pred             cCcccccCCCCCcccccccCCcc-cCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhccc
Q 048419          480 GLAKIYEHGANPQTTHIVGTLGY-LAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEG  558 (653)
Q Consensus       480 Gla~~~~~~~~~~~~~~~gt~~y-~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~  558 (653)
                      |.+..+...   .......+..| .+|+......+..+.|+|+||.-+.|.+++...-......        .  ....+
T Consensus       412 ~~~t~~~~~---~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~~--------~--~i~~~  478 (524)
T KOG0601|consen  412 GCWTRLAFS---SGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQS--------L--TIRSG  478 (524)
T ss_pred             cccccccee---cccccccccccccchhhccccccccccccccccccccccccCcccCcccccc--------e--eeecc
Confidence            998742211   11111122234 3555566667888999999999999999987644332211        0  00111


Q ss_pred             chhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcCC
Q 048419          559 EITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLGD  607 (653)
Q Consensus       559 ~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  607 (653)
                      ....     +   . .....+..+...+..+++..||.+.++..+.+..
T Consensus       479 ~~p~-----~---~-~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~~  518 (524)
T KOG0601|consen  479 DTPN-----L---P-GLKLQLQVLLKVMINPDRKRRPSAVELSLHSEFY  518 (524)
T ss_pred             cccC-----C---C-chHHhhhhhhhhhcCCccccchhhhhhcccchhh
Confidence            1111     0   0 1114566777888999999999999988776544

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=99.10  E-value=7.5e-10  Score=109.42  Aligned_cols=143  Identities=17%  Similarity=0.224  Sum_probs=109.3

Q ss_pred             ceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCch-hhHHHHHHHHHHHhhcCCC--ceeeeeeeecccc---eeEEEEec
Q 048419          335 QNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQ-QGMKEFVAEIMSMGRLRHR--NLVQLHGWCRKQD---ELLLVYDY  408 (653)
Q Consensus       335 ~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~--niv~l~g~~~~~~---~~~lV~E~  408 (653)
                      .+.|+.|..+.||++...+ |..+++|....... .....+..|+++++.+++.  ++.+++.++....   ..++||||
T Consensus         3 ~~~l~~G~~n~~~~v~~~~-g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~   81 (223)
T cd05154           3 VRQLSGGQSNLTYLLTAGG-GRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMER   81 (223)
T ss_pred             ceecCCCccceEEEEEecC-CcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEE
Confidence            3578999999999998854 67899999754322 2355788999999999764  4577788776643   56899999


Q ss_pred             cCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhc-------------------------------------
Q 048419          409 VPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEE-------------------------------------  451 (653)
Q Consensus       409 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~-------------------------------------  451 (653)
                      +++.++.+.+..      ..++..++..++.+++++|..||+.                                     
T Consensus        82 i~G~~l~~~~~~------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (223)
T cd05154          82 VDGRVLRDRLLR------PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPP  155 (223)
T ss_pred             eCCEecCCCCCC------CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccH
Confidence            999988776532      1256667777888888888888752                                     


Q ss_pred             ----------------CCCCeEecCCCCCcEEEcC--CCcEEEEeecCccc
Q 048419          452 ----------------CNQRVVHRDVKPSNILLDT--YLNAKLGDFGLAKI  484 (653)
Q Consensus       452 ----------------~~~~ivH~Dlkp~NIll~~--~~~~kl~DfGla~~  484 (653)
                                      ....++|+|+.|.||+++.  ++.+.|+||+.+..
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~  206 (223)
T cd05154         156 AMERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL  206 (223)
T ss_pred             HHHHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence                            1256899999999999988  56789999998764

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>KOG3839 consensus Lectin VIP36, involved in the transport of glycoproteins carrying high mannose-type glycans [Intracellular trafficking, secretion, and vesicular transport]

Probab=99.10  E-value=2.1e-09  Score=106.52  Aligned_cols=190  Identities=19%  Similarity=0.234  Sum_probs=132.5

Q ss_pred             CCeEEecceEecCCCcEEecCCCCCceEEEEcCCCeecccCCCCceeeeEEEEEEEEecCCCCCCCCceEEEEecCCCCC
Q 048419           19 ANLSLEGAAYISTSGILTVTNKSEGLIGHALYPNPLRFKTSNKSVAIDFRTNFVFSILPKYPDLGGQGLAFIIISTNRPE   98 (653)
Q Consensus        19 ~~l~~~g~a~~~~~g~l~Lt~~~~~~~Gr~~y~~pi~~~~~~~~~~~sF~t~F~f~i~~~~~~~~gdGlaF~l~~~~~~~   98 (653)
                      .+..+.|++.+. +.-++||.+..++.|.++=.+||...        +|..-+.|.|.......-|||||+..+-.... 
T Consensus        72 ~~W~~~Gstvv~-~~~irLT~d~qsk~GAv~n~~Pv~s~--------~wev~v~fkv~~~s~~lfgdG~Aiw~t~Er~q-  141 (351)
T KOG3839|consen   72 PNWNLSGSTVVT-SNYIRLTPDEQSKSGAVWNRQPVFSR--------DWEVLVHFKVHGQSKNLFGDGMAIWYTKERAQ-  141 (351)
T ss_pred             cCccccccEEEE-eeeeeccccccccccccccCCCcccc--------ceeEEEEEEEecCCCcccccceEEEeeccccc-
Confidence            468889998887 66699999999999999999999853        69999999999888888899999999876532 


Q ss_pred             CCCCCccccCCCcccCCCCCCCCceEEEEeecccccccCCCC---CCeeeEecCCCCcCCcccCccccCCCC------cc
Q 048419           99 NCLANQFLGLPNITMSSSTKFSTRMLAVEFDIIQNTELIDIN---DNHVGIDISSLISSASEPASYYSGNNH------RI  169 (653)
Q Consensus        99 ~~~~g~~lG~~~~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~---~~Hvgid~ns~~s~~~~~~~~~~~~~~------~~  169 (653)
                         .|..+|-++.-+         .+||=.|||.|.+  .|.   .+-|.+.+|-      -+++|+-+.++      ..
T Consensus       142 ---~GPvFG~~dkF~---------GL~vfidtY~n~~--g~~~~v~P~isvmv~~------gs~sYD~~~Dg~~tel~gc  201 (351)
T KOG3839|consen  142 ---PGPVFGSKDKFT---------GLAVFIDTYGNHN--GPHEHVFPYISVMVNI------GSLSYDHSKDGTHTELAGC  201 (351)
T ss_pred             ---CCCCCCCcccce---------eEEEEEeccCCcC--CCcccceeeEEEEecc------CCcccccCCCCCccccccc
Confidence               456677765433         3899999999852  121   2444554432      12222222211      01


Q ss_pred             ccccCCC-CceEEEEEecCCceEEEEEEeeCCCCCCCCCceeeeecCCcc-cccceEEeEecccCcccceeeecceee
Q 048419          170 PILLRSG-DPIQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSV-IDEYMYTGFSASTGLITASHNVHGWSI  245 (653)
Q Consensus       170 ~~~l~~g-~~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~~l~~~~dL~~~-l~~~~~vGFsastg~~~~~~~i~sWsf  245 (653)
                      ...+++. -...+-|.|+.  ++|++..+..+   |.  ....-+++..+ +|.--|+|+||+||...+.|.|.|-.+
T Consensus       202 ~a~~rn~~~dt~~~iry~~--~~l~~~~dl~~---~~--~~~~c~~~n~v~lp~g~~fg~SasTGdlSd~HdivS~kl  272 (351)
T KOG3839|consen  202 TANFRNLPHDTLVVIRYEK--KTLSISIDLEG---PN--EWIDCFSLNNVELPLGYFFGVSASTGDLSDSHDIVSLKL  272 (351)
T ss_pred             eeeeccCCCcceeEEEecC--CceEEEEecCC---Cc--eeeeeeeecceecccceEEeeeeccCccchhhHHHHhhh
Confidence            1222222 23467889987  66777765543   22  24555667765 688889999999999999999998765

>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]

Probab=99.06  E-value=2.3e-09  Score=112.82  Aligned_cols=170  Identities=18%  Similarity=0.296  Sum_probs=133.1

Q ss_pred             EEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeeccc----ceeEEEEeccCC-CCchhhh
Q 048419          344 GRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQ----DELLLVYDYVPN-GSLDKLL  418 (653)
Q Consensus       344 g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~----~~~~lV~E~~~~-gsL~~~l  418 (653)
                      .+.||+...-+|..|++|++.....+.......-++.++++.|.|+|++.+.+...    ..+++||+|.|+ ++|.++-
T Consensus       290 ~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~~  369 (655)
T KOG3741|consen  290 ITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDLY  369 (655)
T ss_pred             ceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHHH
Confidence            58899999999999999999544434444455678899999999999999987632    368999999986 5777766


Q ss_pred             hcccccc----------cccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCC
Q 048419          419 FDKDHKL----------RKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHG  488 (653)
Q Consensus       419 ~~~~~~~----------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~  488 (653)
                      +......          ...+++..+|.++.|+..||.++|+   .|..-+-|.+++|+++.+.+++|+..|....+..+
T Consensus       370 F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHs---sGLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~d  446 (655)
T KOG3741|consen  370 FANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHS---SGLACKTLDLKKILVTGKMRIRISGCGIMDVLQED  446 (655)
T ss_pred             ccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHh---cCceeecccHhHeEeeCcceEEEecccceeeecCC
Confidence            5543221          2347788999999999999999999   89999999999999999999999998887765443


Q ss_pred             CCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCC
Q 048419          489 ANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRR  534 (653)
Q Consensus       489 ~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~  534 (653)
                      ..               |.+   .-..+-|.=.||.+++.|.||..
T Consensus       447 ~~---------------~~l---e~~Qq~D~~~lG~ll~aLAt~~~  474 (655)
T KOG3741|consen  447 PT---------------EPL---ESQQQNDLRDLGLLLLALATGTE  474 (655)
T ss_pred             CC---------------cch---hHHhhhhHHHHHHHHHHHhhccc
Confidence            20               111   11246788899999999999954

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=98.95  E-value=9.2e-09  Score=94.93  Aligned_cols=143  Identities=19%  Similarity=0.210  Sum_probs=104.2

Q ss_pred             cceeeeeeCcEEEEEEEeCCCCcEEEEEEec-cC-------chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEE
Q 048419          334 EQNLVGSGGFGRVYRGLMPSLGLEVAIKRIG-HN-------SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLV  405 (653)
Q Consensus       334 ~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~-~~-------~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV  405 (653)
                      ...+|-||+-+.|+++.+.  |+...||.-. +.       .+-..+...+|++.+.+++--.|.--.-++.+...-.|+
T Consensus        11 ~l~likQGAEArv~~~~~~--Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~   88 (229)
T KOG3087|consen   11 SLELIKQGAEARVPRGSFS--GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIY   88 (229)
T ss_pred             cceeeeccceeeEeeeccC--CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEE
Confidence            5678999999999999986  6777777532 11       111245678899999998754544434445555566899


Q ss_pred             EeccCC-CCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCC---cEEEEeecC
Q 048419          406 YDYVPN-GSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYL---NAKLGDFGL  481 (653)
Q Consensus       406 ~E~~~~-gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~---~~kl~DfGl  481 (653)
                      |||+++ .++.+++.....   ..........++..|-+.+.-||.   .+|+|+||..+||+|.+++   .+.++|||+
T Consensus        89 ME~~~g~~~vk~~i~~~~~---~~~~d~~~~~~~~~iG~~igklH~---ndiiHGDLTTSNill~~~~~~~~~~lIdfgl  162 (229)
T KOG3087|consen   89 MEFIDGASTVKDFILSTME---DESEDEGLAELARRIGELIGKLHD---NDIIHGDLTTSNILLRSDGNQITPILIDFGL  162 (229)
T ss_pred             EEeccchhHHHHHHHHHcc---CcccchhHHHHHHHHHHHHHHhhh---CCeecccccccceEEecCCCcCceEEEeecc
Confidence            999977 477887766542   222223336788999999999999   9999999999999996554   368999999


Q ss_pred             ccc
Q 048419          482 AKI  484 (653)
Q Consensus       482 a~~  484 (653)
                      +..
T Consensus       163 s~~  165 (229)
T KOG3087|consen  163 SSV  165 (229)
T ss_pred             hhc
Confidence            864

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.93  E-value=8.5e-09  Score=95.71  Aligned_cols=130  Identities=22%  Similarity=0.269  Sum_probs=98.2

Q ss_pred             eeeeeCcEEEEEEEeCCCCcEEEEEEeccC---chh-----hHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEec
Q 048419          337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHN---SQQ-----GMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDY  408 (653)
Q Consensus       337 ~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~-----~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~  408 (653)
                      .+++|+-+.+|.+.+.  |..+++|.-...   .++     ..+.-.+|+.++.+++--.|.--.=+..+.+...|+|||
T Consensus         3 ~i~~GAEa~i~~~~~~--g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~   80 (204)
T COG3642           3 LIKQGAEAIIYLTDFL--GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEY   80 (204)
T ss_pred             hhhCCcceeEEeeecc--CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEE
Confidence            5789999999999774  455777754222   111     134567899999998755554444455667777899999


Q ss_pred             cCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccc
Q 048419          409 VPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKI  484 (653)
Q Consensus       409 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~  484 (653)
                      ++|..|.+++...            +..++..+-.-+.-||.   .+|+|+||.++||++.... +.++||||+..
T Consensus        81 I~G~~lkd~l~~~------------~~~~~r~vG~~vg~lH~---~givHGDLTtsNiIl~~~~-i~~IDfGLg~~  140 (204)
T COG3642          81 IEGELLKDALEEA------------RPDLLREVGRLVGKLHK---AGIVHGDLTTSNIILSGGR-IYFIDFGLGEF  140 (204)
T ss_pred             eCChhHHHHHHhc------------chHHHHHHHHHHHHHHh---cCeecCCCccceEEEeCCc-EEEEECCcccc
Confidence            9998888887543            24567777788888999   9999999999999997765 99999999874

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=98.80  E-value=2.2e-09  Score=121.20  Aligned_cols=250  Identities=21%  Similarity=0.205  Sum_probs=165.5

Q ss_pred             hhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc---hhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEE
Q 048419          328 VTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS---QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLL  404 (653)
Q Consensus       328 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  404 (653)
                      .-+.|.+.+-+-+|.++.+..+.-...|...++|......   ....+....+-.++-..+||-++...--+......+|
T Consensus       802 S~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L  881 (1205)
T KOG0606|consen  802 SPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPL  881 (1205)
T ss_pred             CCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcch
Confidence            3456666777888999999888776666556666543221   1112222222222222234555544444455667899


Q ss_pred             EEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccc
Q 048419          405 VYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKI  484 (653)
Q Consensus       405 V~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~  484 (653)
                      +++|..+++|...|+..+.     ++..........+.++++|||.   ..+.|+|++|.|++...++..++.||+....
T Consensus       882 ~~~~~~~~~~~Skl~~~~~-----~saepaRs~i~~~vqs~e~L~s---~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~  953 (1205)
T KOG0606|consen  882 VGHYLNGGDLPSKLHNSGC-----LSAEPARSPILERVQSLESLHS---SLRKHRDLKPDSLLIAYDGHRPLTDFGTLSK  953 (1205)
T ss_pred             hhHHhccCCchhhhhcCCC-----cccccccchhHHHHhhhhcccc---chhhcccccccchhhcccCCcccCccccccc
Confidence            9999999999999987652     4444445556678899999999   6799999999999999999999999984432


Q ss_pred             ccCC----------------------------CC--CcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCC
Q 048419          485 YEHG----------------------------AN--PQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRR  534 (653)
Q Consensus       485 ~~~~----------------------------~~--~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~  534 (653)
                      ....                            ..  .......||+.|.+||...+......+|.|+.|++++|.++|..
T Consensus       954 vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~p 1033 (1205)
T KOG0606|consen  954 VGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIP 1033 (1205)
T ss_pred             cccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCC
Confidence            2100                            00  01223468999999999999999999999999999999999999


Q ss_pred             CCChhhhhhHHHHHHHHHhhhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHH
Q 048419          535 SIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMR  598 (653)
Q Consensus       535 p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~  598 (653)
                      |+.........       .....+.+.-      ..-......+..+++...+..+|.+|-.|.
T Consensus      1034 p~na~tpq~~f-------~ni~~~~~~~------p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1034 PFNAETPQQIF-------ENILNRDIPW------PEGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred             CCCCcchhhhh-------hccccCCCCC------CCCccccChhhhhhhhhhhccCchhccCcc
Confidence            99876543211       0000111100      011122334566677777788888887776

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.80  E-value=6.9e-08  Score=92.36  Aligned_cols=125  Identities=26%  Similarity=0.342  Sum_probs=81.6

Q ss_pred             EEEEEEeCCCCcEEEEEEeccCc--------------h-------h-----hHHHHHHHHHHHhhcCCC--ceeeeeeee
Q 048419          345 RVYRGLMPSLGLEVAIKRIGHNS--------------Q-------Q-----GMKEFVAEIMSMGRLRHR--NLVQLHGWC  396 (653)
Q Consensus       345 ~Vy~~~~~~~~~~vavK~~~~~~--------------~-------~-----~~~~~~~E~~~l~~l~H~--niv~l~g~~  396 (653)
                      .||.|...+ |..+|||..+...              .       .     ......+|.+.|.++...  ++.+++.+-
T Consensus         1 ~Vy~~~~~~-~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~   79 (188)
T PF01163_consen    1 DVYHAIDPD-GEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN   79 (188)
T ss_dssp             EEEEEEECT-TEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE
T ss_pred             CEEEEECCC-CCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe
Confidence            389998854 7899999874321              0       0     112356799999999765  455665442


Q ss_pred             cccceeEEEEeccC--CCCchhhhhcccccccccchhhhHHHHHHHHHHHHHH-HHhcCCCCeEecCCCCCcEEEcCCCc
Q 048419          397 RKQDELLLVYDYVP--NGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLY-LHEECNQRVVHRDVKPSNILLDTYLN  473 (653)
Q Consensus       397 ~~~~~~~lV~E~~~--~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~y-LH~~~~~~ivH~Dlkp~NIll~~~~~  473 (653)
                          .-+|||||++  |..+..+. ...      ++.+....++.+++..+.. +|.   .+++|+||.+.||+++++ .
T Consensus        80 ----~~~ivME~I~~~G~~~~~l~-~~~------~~~~~~~~~~~~il~~~~~~~~~---~givHGDLs~~NIlv~~~-~  144 (188)
T PF01163_consen   80 ----RNVIVMEYIGEDGVPLPRLK-DVD------LSPEEPKELLEEILEEIIKMLHK---AGIVHGDLSEYNILVDDG-K  144 (188)
T ss_dssp             ----TTEEEEE--EETTEEGGCHH-HCG------GGGSTHHHHHHHHHHHHHHHHHC---TTEEESS-STTSEEEETT-C
T ss_pred             ----CCEEEEEecCCCccchhhHH-hcc------ccchhHHHHHHHHHHHHHHHHHh---cCceecCCChhhEEeecc-e
Confidence                3479999998  54444332 221      2345566788888886655 567   899999999999999888 9


Q ss_pred             EEEEeecCcccc
Q 048419          474 AKLGDFGLAKIY  485 (653)
Q Consensus       474 ~kl~DfGla~~~  485 (653)
                      +.|+|||.+...
T Consensus       145 ~~iIDf~qav~~  156 (188)
T PF01163_consen  145 VYIIDFGQAVDS  156 (188)
T ss_dssp             EEE--GTTEEET
T ss_pred             EEEEecCcceec
Confidence            999999988754

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=98.79  E-value=7.5e-08  Score=97.59  Aligned_cols=141  Identities=16%  Similarity=0.088  Sum_probs=99.8

Q ss_pred             eeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchh-hHH----------HHHHHHHHHhhcCCCc--eeeeeeeecc----
Q 048419          336 NLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQ-GMK----------EFVAEIMSMGRLRHRN--LVQLHGWCRK----  398 (653)
Q Consensus       336 ~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~-~~~----------~~~~E~~~l~~l~H~n--iv~l~g~~~~----  398 (653)
                      +.+-......|.+....  |+.+.||+....... ..+          .+.+|...+.+|...+  ..+++++...    
T Consensus        28 e~v~~~~~rrvvr~~~~--g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~  105 (268)
T PRK15123         28 EVFRELEGRRTLRFELA--GKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNP  105 (268)
T ss_pred             cEEecCCCceEEEEEEC--CEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCC
Confidence            44554444557777663  678999987433211 112          3778999988885433  3344555433    


Q ss_pred             -cceeEEEEeccCCC-CchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcC------
Q 048419          399 -QDELLLVYDYVPNG-SLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDT------  470 (653)
Q Consensus       399 -~~~~~lV~E~~~~g-sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~------  470 (653)
                       ....+||+|++++. +|.+++....   ....+...+..++.+++..+.-||.   .||+|+|++++|||++.      
T Consensus       106 ~~~~s~LVte~l~~~~sL~~~~~~~~---~~~~~~~~~~~ll~~la~~i~~LH~---~Gi~HgDL~~~NiLl~~~~~~~~  179 (268)
T PRK15123        106 ATRTSFIITEDLAPTISLEDYCADWA---TNPPDPRLKRMLIKRVATMVRDMHA---AGINHRDCYICHFLLHLPFPGRE  179 (268)
T ss_pred             ccceeEEEEeeCCCCccHHHHHHhhc---ccCCCHHHHHHHHHHHHHHHHHHHH---CcCccCCCChhhEEEeccccCCC
Confidence             23468999999886 7888875321   1223455677899999999999999   99999999999999975      


Q ss_pred             -CCcEEEEeecCccc
Q 048419          471 -YLNAKLGDFGLAKI  484 (653)
Q Consensus       471 -~~~~kl~DfGla~~  484 (653)
                       +..+.++||+.++.
T Consensus       180 ~~~~~~LIDl~r~~~  194 (268)
T PRK15123        180 EDLKLSVIDLHRAQI  194 (268)
T ss_pred             CCceEEEEECCcccc
Confidence             56899999998863

>cd06900 lectin_VcfQ VcfQ bacterial pilus biogenesis protein, lectin domain

Probab=98.79  E-value=6e-07  Score=86.07  Aligned_cols=201  Identities=16%  Similarity=0.154  Sum_probs=117.7

Q ss_pred             CCcEEecCCCCCceEEEEcCCCeecccCCCCceeeeEEEEEEEEecCCCCCCCCceEEEEecCC-CCCCCCCCccccCCC
Q 048419           32 SGILTVTNKSEGLIGHALYPNPLRFKTSNKSVAIDFRTNFVFSILPKYPDLGGQGLAFIIISTN-RPENCLANQFLGLPN  110 (653)
Q Consensus        32 ~g~l~Lt~~~~~~~Gr~~y~~pi~~~~~~~~~~~sF~t~F~f~i~~~~~~~~gdGlaF~l~~~~-~~~~~~~g~~lG~~~  110 (653)
                      +|+||||+...+|.|-+.|.+++|--+.      -...+|.+..-.. ...+|||+||||+-.. .+..+..||.||+.-
T Consensus        31 ~g~LRLT~~~~nqata~~~~~~FPs~~n------~v~veFd~yayg~-~g~GADGia~vLsDasv~p~~G~fGGsLGYa~  103 (255)
T cd06900          31 NNRLRLTDASGNQATAVTLQRLFPSAGN------YVEVEFDYYAYGS-GGNGADGVALVLSDASVTPQAGAFGGSLGYAQ  103 (255)
T ss_pred             cCeEEeccCccCcceeEEEeeeeccCCC------eEEEEEEEEEecC-CCCCCceEEEEEeCCCcCCcCCCcCccccccc
Confidence            6899999999999999999998886421      2678888877654 5668999999998544 334567788899987


Q ss_pred             cccCCCCCCCCceEEEEeeccccccc-CCCC-------CCeeeEecCCCCcCCcccCccccCCCCc-cccccC------C
Q 048419          111 ITMSSSTKFSTRMLAVEFDIIQNTEL-IDIN-------DNHVGIDISSLISSASEPASYYSGNNHR-IPILLR------S  175 (653)
Q Consensus       111 ~~~~~~~~~~~~~vaVEFDt~~n~~~-~d~~-------~~Hvgid~ns~~s~~~~~~~~~~~~~~~-~~~~l~------~  175 (653)
                      +... .......-++|-||-|-|... .+..       .+-|+|  .+--+. +....|-.+.... ..++..      -
T Consensus       104 ~~~~-~~GfaGGwLGiGlDEyGNFsn~~eg~~~~~g~r~~sV~v--RGsg~g-~~gY~yl~gt~~~~~~id~~~~~~~~~  179 (255)
T cd06900         104 RNDG-VPGFAGGWLGIGLDEYGNFSNPNEGRNGFSGRRPQSVTV--RGSGSG-YTGYKYITGTGVLPPGIDNNSTSTPAP  179 (255)
T ss_pred             ccCC-CCccccceEEEEEeccccccCCCCCccCCcccccceEEE--ECCCCC-CcCceEecccCCCCcccccCCCCCCCC
Confidence            6532 245666789999999877421 1211       133333  111110 1111221111111 111111      1


Q ss_pred             CCceEEEEEec-CCceEEEEEEeeCCCCCCCCCcee--eeecCC--cccccceEEeEecccCcccceeeeccee
Q 048419          176 GDPIQAWVDYS-SQEMLINVSICPLGVPKPYRPLIS--LPIDLS--SVIDEYMYTGFSASTGLITASHNVHGWS  244 (653)
Q Consensus       176 g~~~~~~I~Y~-~~~~~l~v~~~~~~~~~~~~~~l~--~~~dL~--~~l~~~~~vGFsastg~~~~~~~i~sWs  244 (653)
                      +-++++.||=. +....|+|.-+-.+... ..+++.  ..++..  ..+|+..+++|++|||..+-.|.|....
T Consensus       180 ~hrY~i~Ids~~~~~~~vsV~R~~~~gg~-~~~~I~~~d~~~~~~q~avP~~f~lS~TgSTGgstN~HEIdnf~  252 (255)
T cd06900         180 GHRYRITIDSTNGDNAWLSVERDIGNGGA-YFVVILTFDALAEQNQDAIPENFYLSFTGSTGGSTNTHEIDNFQ  252 (255)
T ss_pred             ceEEEEEEecCCCCceEEEEEEEccCCce-eEEeecceeeccccCCCCCCccEEEEEEecCCCcccceeecceE
Confidence            23444455443 22334555544322211 111221  112333  5679999999999999999999987643

This family includes bacterial proteins homologous to the VcfQ (also known as MshQ) bacterial pilus biogenesis protein. VcfQ is encoded by the vcfQ gene of the type IV pilus gene cluster of Vibrio cholerae and is essential for type IV pilus assembly. VcfQ has a Laminin G-like domain as well as an L-type lectin domain.

>KOG3838 consensus Mannose lectin ERGIC-53, involved in glycoprotein traffic [Intracellular trafficking, secretion, and vesicular transport]

Probab=98.76  E-value=3.6e-07  Score=92.11  Aligned_cols=191  Identities=17%  Similarity=0.211  Sum_probs=127.7

Q ss_pred             eEEecceEecCCCcEEecCCCCCceEEEEcCCCeecccCCCCceeeeEEEEEEEEecCCCCCCCCceEEEEecCCCCCCC
Q 048419           21 LSLEGAAYISTSGILTVTNKSEGLIGHALYPNPLRFKTSNKSVAIDFRTNFVFSILPKYPDLGGQGLAFIIISTNRPENC  100 (653)
Q Consensus        21 l~~~g~a~~~~~g~l~Lt~~~~~~~Gr~~y~~pi~~~~~~~~~~~sF~t~F~f~i~~~~~~~~gdGlaF~l~~~~~~~~~  100 (653)
                      ..--|||.. +.-.|+|+++-.++.|.||-+..+++        -.|..+-+|+|+.. .-.++||||+.-+....    
T Consensus        56 W~~~GdAIa-s~eqvRlaPSmrsrkGavWtka~~~f--------e~weVev~~rVtGr-GRiGAdGlaiWYt~~~G----  121 (497)
T KOG3838|consen   56 WSHHGDAIA-SSEQVRLAPSMRSRKGAVWTKASVPF--------ENWEVEVQFRVTGR-GRIGADGLAIWYTRGRG----  121 (497)
T ss_pred             eeecCcccc-cccceeeccccccccCceeecccCCc--------ccceEEEEEEeccc-ccccCCceEEEEecCCC----
Confidence            566788854 57789999998889999988887777        24899999999876 34489999999986432    


Q ss_pred             CCCccccCCCcccCCCCCCCCceEEEEeecccccccCCCCCCeeeEecCCCCcCCcccCccccCCC----CccccccCC-
Q 048419          101 LANQFLGLPNITMSSSTKFSTRMLAVEFDIIQNTELIDINDNHVGIDISSLISSASEPASYYSGNN----HRIPILLRS-  175 (653)
Q Consensus       101 ~~g~~lG~~~~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~~~Hvgid~ns~~s~~~~~~~~~~~~~----~~~~~~l~~-  175 (653)
                      --|..+|-.+.=+.         +++-||.|.|.  +--|++-|.+-.|.=    +.+..--.+..    +...-+.+| 
T Consensus       122 ~~GpVfGg~d~WnG---------igiffDSfdnD--~qknnP~Is~~lndG----t~~ydh~~DGasQ~LssCqrDFRNk  186 (497)
T KOG3838|consen  122 HVGPVFGGLDSWNG---------IGIFFDSFDND--GQKNNPAISVLLNDG----TIPYDHPGDGASQGLSSCQRDFRNK  186 (497)
T ss_pred             cccccccccccccc---------eEEEeeccccc--CCcCCccEEEEecCC----cccccCCCccHHHHHHHhhHHhccC
Confidence            23344444443332         79999999986  445677787766531    11110000100    012223333 


Q ss_pred             CCceEEEEEecCCceEEEEEEeeCCCCCCCCCceeeeecCCcc-cccceEEeEecccCcccceeeecceee
Q 048419          176 GDPIQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSV-IDEYMYTGFSASTGLITASHNVHGWSI  245 (653)
Q Consensus       176 g~~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~~l~~~~dL~~~-l~~~~~vGFsastg~~~~~~~i~sWsf  245 (653)
                      =-++.|+|+|-  .++|+|.+...-.+.   +-...=++...+ ||..-|+|.||+||....-|+|++..-
T Consensus       187 PyPvRarItY~--~nvLtv~innGmtp~---d~yE~C~rve~~~lp~nGyFGvSAATGgLADDHDVl~Flt  252 (497)
T KOG3838|consen  187 PYPVRARITYY--GNVLTVMINNGMTPS---DDYEFCVRVENLLLPPNGYFGVSAATGGLADDHDVLSFLT  252 (497)
T ss_pred             CCCceEEEEEe--ccEEEEEEcCCCCCC---CCcceeEeccceeccCCCeeeeeecccccccccceeeeEE
Confidence            35788999997  557999887554332   112223344443 589999999999999999999998653

>PRK09902 hypothetical protein; Provisional

Probab=98.48  E-value=1.8e-06  Score=83.26  Aligned_cols=142  Identities=18%  Similarity=0.141  Sum_probs=105.7

Q ss_pred             cceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC---c---hhhHHHHHHHHHHHhhcCCC--ceeeeeeeeccc-----c
Q 048419          334 EQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN---S---QQGMKEFVAEIMSMGRLRHR--NLVQLHGWCRKQ-----D  400 (653)
Q Consensus       334 ~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~---~~~~~~~~~E~~~l~~l~H~--niv~l~g~~~~~-----~  400 (653)
                      +.---|+||-+.|++....  |..+-+|+-...   +   +-....|.+|+..|.+|...  .+.++. ++...     -
T Consensus        22 e~pN~~rgG~SgV~r~~~~--g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~   98 (216)
T PRK09902         22 EEPNYRRNGMSGVQCVERN--GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEW   98 (216)
T ss_pred             cCCCcCCCCcceEEEEEeC--CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCce
Confidence            3334678999999998775  457999987521   1   33567899999999999643  344444 33221     1


Q ss_pred             eeEEEEeccCC-CCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCc--EEEE
Q 048419          401 ELLLVYDYVPN-GSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLN--AKLG  477 (653)
Q Consensus       401 ~~~lV~E~~~~-gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~--~kl~  477 (653)
                      .-+||+|-+++ -+|.+++.+..   ....+..++..++.++++++.-||+   .++.|+|+-+.||+++.++.  ++++
T Consensus        99 rA~LVTe~L~g~~~L~~~l~~~~---~~~~~~~~k~~il~~va~~ia~LH~---~Gv~Hgdly~khIll~~~g~~~v~lI  172 (216)
T PRK09902         99 RALLVTEDMAGFISIADWYAQHA---VSPYSDEVRQAMLKAVALAFKKMHS---VNRQHGCCYVRHIYVKTEGKAEAGFL  172 (216)
T ss_pred             EEEEEEEeCCCCccHHHHHhcCC---cCCcchHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHhheeecCCCCeeEEEE
Confidence            36899997754 58888886543   2245667788999999999999999   99999999999999986667  9999


Q ss_pred             eecCccc
Q 048419          478 DFGLAKI  484 (653)
Q Consensus       478 DfGla~~  484 (653)
                      ||.-++.
T Consensus       173 DlEk~r~  179 (216)
T PRK09902        173 DLEKSRR  179 (216)
T ss_pred             Ehhccch
Confidence            9986653

>KOG2137 consensus Protein kinase [Signal transduction mechanisms]

Probab=98.47  E-value=5.8e-08  Score=106.14  Aligned_cols=153  Identities=19%  Similarity=0.235  Sum_probs=105.2

Q ss_pred             HHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCCCC--------cccccccCCcccCcccccc
Q 048419          439 IGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANP--------QTTHIVGTLGYLAPELTRT  510 (653)
Q Consensus       439 ~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~--------~~~~~~gt~~y~aPE~~~~  510 (653)
                      .+++.|+.|+|..  .++||++|.|++|.+++++..||+.|+.+.........        ..-.......|.|||++..
T Consensus       106 ~~v~dgl~flh~s--Ak~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~  183 (700)
T KOG2137|consen  106 GNVADGLAFLHRS--AKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLG  183 (700)
T ss_pred             hcccchhhhhccC--cceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcc
Confidence            4456999999984  79999999999999999999999999988755432110        0011123567999999998


Q ss_pred             CCCCCccceeehHHHHHHHHhCCCCCC-hhhhhhHHHHHHHHHhhhcccchhHhhhh-ccCcCCHHHHHHHHHHHHHcCC
Q 048419          511 GKATTSTDVYSYGILMLEVACGRRSIE-PQKAAAELLLVDWVKELHLEGEITQAIDQ-TLDYYDLAEAELVLNLGLFCSA  588 (653)
Q Consensus       511 ~~~~~ksDV~s~Gvvl~elltG~~p~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~d~-~l~~~~~~~~~~l~~l~~~Cl~  588 (653)
                      ...+.++|+||+||++|.+..|+.+.- ......             ........+. ....+......++.+=+.+.+.
T Consensus       184 ~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~-------------~~~~~~~~~~~~~~~~s~~~p~el~~~l~k~l~  250 (700)
T KOG2137|consen  184 TTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLL-------------SYSFSRNLLNAGAFGYSNNLPSELRESLKKLLN  250 (700)
T ss_pred             ccccccccceeeeeEEEEEecCCcchhhccCCcc-------------hhhhhhcccccccccccccCcHHHHHHHHHHhc
Confidence            888999999999999999996555432 221110             0000010111 1112223345667777888999


Q ss_pred             CCCCCCCCHHHHHHHHcC
Q 048419          589 PNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       589 ~dP~~RPs~~evl~~L~~  606 (653)
                      .++.-||++.++....-.
T Consensus       251 ~~~~~rp~~~~l~~~~ff  268 (700)
T KOG2137|consen  251 GDSAVRPTLDLLLSIPFF  268 (700)
T ss_pred             CCcccCcchhhhhccccc
Confidence            999999988888776544

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=98.47  E-value=1.9e-06  Score=85.04  Aligned_cols=133  Identities=22%  Similarity=0.235  Sum_probs=92.9

Q ss_pred             cceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchh----------------------hHHHHHHHHHHHhhcCCC--ce
Q 048419          334 EQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQ----------------------GMKEFVAEIMSMGRLRHR--NL  389 (653)
Q Consensus       334 ~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~----------------------~~~~~~~E~~~l~~l~H~--ni  389 (653)
                      +...||-|--+.||.|..+ .|.++|||.-+....+                      ......+|.++|.+|...  .+
T Consensus        95 iG~~IGvGKEsdVY~~~~~-~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~V  173 (304)
T COG0478          95 IGTKIGVGKESDVYVAIDP-KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVKV  173 (304)
T ss_pred             hccccccCccceEEEEECC-CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCCC
Confidence            4578999999999999997 4889999975432110                      122456788899988654  55


Q ss_pred             eeeeeeecccceeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEc
Q 048419          390 VQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLD  469 (653)
Q Consensus       390 v~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~  469 (653)
                      .+.+++    +.-.+||||+.|--|...-          ++.+..-.++..|+.-+.-+-.   .||||+|+.+-||+++
T Consensus       174 P~P~~~----nRHaVvMe~ieG~eL~~~r----------~~~en~~~il~~il~~~~~~~~---~GiVHGDlSefNIlV~  236 (304)
T COG0478         174 PKPIAW----NRHAVVMEYIEGVELYRLR----------LDVENPDEILDKILEEVRKAYR---RGIVHGDLSEFNILVT  236 (304)
T ss_pred             CCcccc----ccceeeeehcccceeeccc----------CcccCHHHHHHHHHHHHHHHHH---cCccccCCchheEEEe
Confidence            555443    4568999999886665432          1122233344444444444444   7999999999999999


Q ss_pred             CCCcEEEEeecCccc
Q 048419          470 TYLNAKLGDFGLAKI  484 (653)
Q Consensus       470 ~~~~~kl~DfGla~~  484 (653)
                      ++|.+.++||--+..
T Consensus       237 ~dg~~~vIDwPQ~v~  251 (304)
T COG0478         237 EDGDIVVIDWPQAVP  251 (304)
T ss_pred             cCCCEEEEeCccccc
Confidence            999999999965543

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.45  E-value=1.2e-06  Score=85.65  Aligned_cols=105  Identities=25%  Similarity=0.332  Sum_probs=82.7

Q ss_pred             HHHHHHHHHHhhcCCC--ceeeeeeeecccc----eeEEEEeccCCC-CchhhhhcccccccccchhhhHHHHHHHHHHH
Q 048419          372 KEFVAEIMSMGRLRHR--NLVQLHGWCRKQD----ELLLVYDYVPNG-SLDKLLFDKDHKLRKLLTWDQRYKILIGIAQS  444 (653)
Q Consensus       372 ~~~~~E~~~l~~l~H~--niv~l~g~~~~~~----~~~lV~E~~~~g-sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~  444 (653)
                      ....+|...+.+|...  ...+.+++.....    ..+||+|++++. +|.+++.....     ++...+..++.+++..
T Consensus        56 ~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~-----~~~~~~~~ll~~l~~~  130 (206)
T PF06293_consen   56 SRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQ-----LDPSQRRELLRALARL  130 (206)
T ss_pred             hHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcc-----cchhhHHHHHHHHHHH
Confidence            4577888888888543  3455666655532    358999999884 79888866321     4556678899999999


Q ss_pred             HHHHHhcCCCCeEecCCCCCcEEEcCCC---cEEEEeecCccc
Q 048419          445 LLYLHEECNQRVVHRDVKPSNILLDTYL---NAKLGDFGLAKI  484 (653)
Q Consensus       445 L~yLH~~~~~~ivH~Dlkp~NIll~~~~---~~kl~DfGla~~  484 (653)
                      +.-||+   .+|+|+|++++|||++.+.   .+.++||+-++.
T Consensus       131 i~~lH~---~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~  170 (206)
T PF06293_consen  131 IAKLHD---AGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF  170 (206)
T ss_pred             HHHHHH---CcCCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence            999999   9999999999999998877   899999998765

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=98.41  E-value=2.8e-06  Score=87.79  Aligned_cols=257  Identities=18%  Similarity=0.139  Sum_probs=154.0

Q ss_pred             cceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhh-cCCCceeeeeeee------ccc-ceeEEE
Q 048419          334 EQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGR-LRHRNLVQLHGWC------RKQ-DELLLV  405 (653)
Q Consensus       334 ~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~-l~H~niv~l~g~~------~~~-~~~~lV  405 (653)
                      ..+.||+|+-+.+|..-.-  +. .+-|+..........+...|   |.. -.||-+-.=+.|=      -++ ...-++
T Consensus        15 ~gr~LgqGgea~ly~l~e~--~d-~VAKIYh~Pppa~~aqk~a~---la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGfl   88 (637)
T COG4248          15 PGRPLGQGGEADLYTLGEV--RD-QVAKIYHAPPPAAQAQKVAE---LAATPDAPLLNYRVAWPQATLHGGRRGKVIGFL   88 (637)
T ss_pred             CCccccCCccceeeecchh--hc-hhheeecCCCchHHHHHHHH---hccCCCCcchhhhhcccHHHhhCCCccceeEEe
Confidence            3567999999999964221  22 34466655443322222222   222 2465443322221      122 236677


Q ss_pred             EeccCCCC-chhhhhcc-cccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcc
Q 048419          406 YDYVPNGS-LDKLLFDK-DHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK  483 (653)
Q Consensus       406 ~E~~~~gs-L~~~l~~~-~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~  483 (653)
                      |..+++.- +..++... ....-....|+-.+++++.+|.+.+.||+   .|.+-+|+.++|+|+.+++.+.|.|-....
T Consensus        89 mP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~---~Gh~vGDVn~~~~lVsd~~~V~LVdsDsfq  165 (637)
T COG4248          89 MPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHE---HGHVVGDVNQNSFLVSDDSKVVLVDSDSFQ  165 (637)
T ss_pred             cccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHh---cCCcccccCccceeeecCceEEEEccccee
Confidence            87776642 22222111 11112457899999999999999999999   899999999999999999999999865544


Q ss_pred             cccCCCCCcccccccCCcccCccccc-----cCCCCCccceeehHHHHHHHHhC-CCCCChhhhhhH--HHHHHHHHhhh
Q 048419          484 IYEHGANPQTTHIVGTLGYLAPELTR-----TGKATTSTDVYSYGILMLEVACG-RRSIEPQKAAAE--LLLVDWVKELH  555 (653)
Q Consensus       484 ~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~ksDV~s~Gvvl~elltG-~~p~~~~~~~~~--~~l~~~~~~~~  555 (653)
                      ....  .......+|...|.+||.-.     +...+..+|-|.+|+++++++.| +.||.+-.....  ..+..    ..
T Consensus       166 i~~n--g~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~----~I  239 (637)
T COG4248         166 INAN--GTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLET----DI  239 (637)
T ss_pred             eccC--CceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchh----hh
Confidence            3322  22233457889999999654     33567899999999999999886 899875332110  00000    00


Q ss_pred             cccchhHhhhhcc------CcCCHH-HHHHHHHHHHHcCCC--CCCCCCCHHHHHHHHc
Q 048419          556 LEGEITQAIDQTL------DYYDLA-EAELVLNLGLFCSAP--NPVYRPDMRRVVEFLL  605 (653)
Q Consensus       556 ~~~~~~~~~d~~l------~~~~~~-~~~~l~~l~~~Cl~~--dP~~RPs~~evl~~L~  605 (653)
                      ..+.....-+...      ...+.. ....+..|-.+|...  ++.-|||++..+..|.
T Consensus       240 a~g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~  298 (637)
T COG4248         240 AHGRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALD  298 (637)
T ss_pred             hcceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHH
Confidence            1111111112111      112222 235566677778765  3568999998876663

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=98.27  E-value=3.8e-06  Score=92.27  Aligned_cols=141  Identities=20%  Similarity=0.253  Sum_probs=90.3

Q ss_pred             eeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhH------------------------------H----------HHH
Q 048419          336 NLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGM------------------------------K----------EFV  375 (653)
Q Consensus       336 ~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~------------------------------~----------~~~  375 (653)
                      +-|+.++-|.||+|++++ |+.||||+.+..-.+..                              +          ++.
T Consensus       131 ~PiAsASIaQVH~A~L~s-G~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~  209 (517)
T COG0661         131 EPIASASIAQVHRAVLKS-GEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYR  209 (517)
T ss_pred             CchhhhhHhhheeEEecC-CCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHH
Confidence            579999999999999976 99999999865422110                              0          133


Q ss_pred             HHHHHHhhcC----CCceeeeeeeecc-cceeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHH-HHHHH
Q 048419          376 AEIMSMGRLR----HRNLVQLHGWCRK-QDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQS-LLYLH  449 (653)
Q Consensus       376 ~E~~~l~~l~----H~niv~l~g~~~~-~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~-L~yLH  449 (653)
                      .|...+.+++    ...-+++=..|.+ .+...|+|||++|-.+.+...-...    .++   +..++..++++ +..+=
T Consensus       210 ~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~~----g~d---~k~ia~~~~~~f~~q~~  282 (517)
T COG0661         210 REAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKSA----GID---RKELAELLVRAFLRQLL  282 (517)
T ss_pred             HHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHhc----CCC---HHHHHHHHHHHHHHHHH
Confidence            4444444442    2222222222322 3456899999999999887432211    122   22233333332 12222


Q ss_pred             hcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccC
Q 048419          450 EECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEH  487 (653)
Q Consensus       450 ~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~  487 (653)
                      .   .+++|.|..|.||+++.++++.+.|||+...+..
T Consensus       283 ~---dgffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~  317 (517)
T COG0661         283 R---DGFFHADPHPGNILVRSDGRIVLLDFGIVGRLDP  317 (517)
T ss_pred             h---cCccccCCCccceEEecCCcEEEEcCcceecCCH
Confidence            2   6899999999999999999999999999986644

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=98.23  E-value=1.9e-05  Score=76.47  Aligned_cols=138  Identities=13%  Similarity=0.154  Sum_probs=92.1

Q ss_pred             hhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHH---------HHHHHHHhhcCC---Cceeeeeee
Q 048419          328 VTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEF---------VAEIMSMGRLRH---RNLVQLHGW  395 (653)
Q Consensus       328 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~---------~~E~~~l~~l~H---~niv~l~g~  395 (653)
                      ..++|...+++-......|.+-...  |..+++|..+.......+.|         .+++..+.+++.   .....++.+
T Consensus        29 ~~~~~~~~kv~k~~~r~~ValIei~--~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~  106 (229)
T PF06176_consen   29 LDNNYKIIKVFKNTKRNYVALIEID--GKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLA  106 (229)
T ss_pred             HhCCceEEEeecCCCccEEEEEEEC--CcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceee
Confidence            4567888888888877777776664  78899999865543322222         233444444432   223332332


Q ss_pred             ec-----ccceeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcC
Q 048419          396 CR-----KQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDT  470 (653)
Q Consensus       396 ~~-----~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~  470 (653)
                      +.     -....+++|||++|..|.++..         ++.    .++..+++++.-||+   .|++|+|..|+|++++.
T Consensus       107 ~ekk~~~~~~~~~ll~EYIeG~~l~d~~~---------i~e----~~~~ki~~~ikqlH~---~G~~HGD~hpgNFlv~~  170 (229)
T PF06176_consen  107 AEKKIFRYTSSYVLLMEYIEGVELNDIED---------IDE----DLAEKIVEAIKQLHK---HGFYHGDPHPGNFLVSN  170 (229)
T ss_pred             eeeeeccceeEEEEEEEEecCeecccchh---------cCH----HHHHHHHHHHHHHHH---cCCccCCCCcCcEEEEC
Confidence            22     2234679999999988866532         221    355667888999999   89999999999999985


Q ss_pred             CCcEEEEeecCccc
Q 048419          471 YLNAKLGDFGLAKI  484 (653)
Q Consensus       471 ~~~~kl~DfGla~~  484 (653)
                      ++ ++++||+..+.
T Consensus       171 ~~-i~iID~~~k~~  183 (229)
T PF06176_consen  171 NG-IRIIDTQGKRM  183 (229)
T ss_pred             Cc-EEEEECccccc
Confidence            54 99999986653

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=98.21  E-value=1.6e-05  Score=78.84  Aligned_cols=141  Identities=15%  Similarity=0.161  Sum_probs=85.1

Q ss_pred             eeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCc--eeeeeeeecccceeEEEEeccCCCC
Q 048419          336 NLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRN--LVQLHGWCRKQDELLLVYDYVPNGS  413 (653)
Q Consensus       336 ~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n--iv~l~g~~~~~~~~~lV~E~~~~gs  413 (653)
                      ..||+|..+.||+.   . +..+++|......  ......+|.+.++.+..-.  +.+.++++...+...+|||+++|..
T Consensus         7 ~~i~~G~t~~~y~~---~-~~~~VlR~~~~~~--~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~~   80 (226)
T TIGR02172         7 TQTGEGGNGESYTH---K-TGKWMLKLYNPGF--DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGKR   80 (226)
T ss_pred             eeecCCCCcceeEe---c-CCCEEEEeCCCCC--CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCcc
Confidence            57899999999984   2 4457889875433  2345678999999986443  4667888877777889999998863


Q ss_pred             -chhhhhccc-----------------ccc-cccchhhhHH-HHHH----------HHHH-HHHHHHhc-CCCCeEecCC
Q 048419          414 -LDKLLFDKD-----------------HKL-RKLLTWDQRY-KILI----------GIAQ-SLLYLHEE-CNQRVVHRDV  461 (653)
Q Consensus       414 -L~~~l~~~~-----------------~~~-~~~l~~~~~~-~i~~----------~ia~-~L~yLH~~-~~~~ivH~Dl  461 (653)
                       +...+....                 +.. ........+. ++..          .+.+ ...+|... ....++|+|+
T Consensus        81 ~~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~HgD~  160 (226)
T TIGR02172        81 SFSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCLHGDF  160 (226)
T ss_pred             chhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceEecCC
Confidence             221111100                 000 0000000000 0000          0111 12222211 1246789999


Q ss_pred             CCCcEEEcCCCcEEEEeecCcc
Q 048419          462 KPSNILLDTYLNAKLGDFGLAK  483 (653)
Q Consensus       462 kp~NIll~~~~~~kl~DfGla~  483 (653)
                      .|.||++++++ +.|+||+.+.
T Consensus       161 ~~~Nii~~~~~-~~iIDwe~a~  181 (226)
T TIGR02172       161 QIGNLITSGKG-TYWIDLGDFG  181 (226)
T ss_pred             CCCcEEEcCCC-cEEEechhcC
Confidence            99999999888 9999999875

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=98.19  E-value=1.7e-05  Score=76.18  Aligned_cols=105  Identities=24%  Similarity=0.212  Sum_probs=83.3

Q ss_pred             HHHHHHHhhcCC-CceeeeeeeecccceeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCC
Q 048419          375 VAEIMSMGRLRH-RNLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECN  453 (653)
Q Consensus       375 ~~E~~~l~~l~H-~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~  453 (653)
                      ..|.-+++.+.+ +++.+++|+|-    .++|.||.+.+++...-.....  -..-+|++|.+|+.++++.+.+|++...
T Consensus         7 ~~E~lll~~l~~~~~~pk~lG~CG----~~~v~E~~~~~~~~~~~~~l~~--~~~~~w~~R~~iA~~lL~~l~~l~~~~~   80 (188)
T PF12260_consen    7 NNEPLLLQLLQGSEPFPKLLGSCG----RFYVVEYVGAGSLYGIYRPLSQ--FLQSPWEQRAKIALQLLELLEELDHGPL   80 (188)
T ss_pred             ccHHHHHHHcCCCCCCCCeeeECC----CEEEEEeecCcccccccccccc--ccccCHHHHHHHHHHHHHHHHHHhcCCC
Confidence            357888888876 69999999993    3679999987766432100000  1125899999999999999999998766


Q ss_pred             CCeEecCCCCCcEEEcCCCcEEEEeecCcccc
Q 048419          454 QRVVHRDVKPSNILLDTYLNAKLGDFGLAKIY  485 (653)
Q Consensus       454 ~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~  485 (653)
                      ..+...|++++|+-+++++++|+.|...+...
T Consensus        81 ~~~~lcDv~~~nfgv~~~~~lk~iDld~v~~~  112 (188)
T PF12260_consen   81 GFFYLCDVSPDNFGVNDDGRLKLIDLDDVFVE  112 (188)
T ss_pred             CcEEEeecchHHeEEeCCCcEEEEechhcchh
Confidence            67899999999999999999999999887654

Proteins in this uncharacterised family are described as transmembrane proteins.

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=98.03  E-value=1.2e-06  Score=94.98  Aligned_cols=183  Identities=19%  Similarity=0.128  Sum_probs=133.5

Q ss_pred             eeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCc-eeeeeeeecccceeEEEEeccCCC-C
Q 048419          336 NLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRN-LVQLHGWCRKQDELLLVYDYVPNG-S  413 (653)
Q Consensus       336 ~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n-iv~l~g~~~~~~~~~lV~E~~~~g-s  413 (653)
                      +-+++++++++||.+..... ....+.+...     ....-++++|.+++||| .++.++-+..+...+++++++.++ +
T Consensus       248 h~fvK~altknpKkRptaek-lL~h~fvs~~-----l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~~i~s~~rs  321 (829)
T KOG0576|consen  248 HNFVKGALTKNPKKRPTAEK-LLQHPFVSQT-----LSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIPMRICSTGRS  321 (829)
T ss_pred             HHHHHHHhcCCCccCCChhh-heeceeeccc-----hhhHHHHHHHHHccCCCCcccccccCCcccccchhhhhhcCCcc
Confidence            45788999999998765433 3336665333     44557889999999999 777788888888899999999877 2


Q ss_pred             chhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCCCCcc
Q 048419          414 LDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQT  493 (653)
Q Consensus       414 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~  493 (653)
                      -.......    ...+...+...+++.-++++++||+   -.-+|+|    ||+..+ ...|.+||+....+....  ..
T Consensus       322 ~~~~~~~s----e~~~~~~~~~~~~r~et~~l~~l~~---~~~~~~d----~~l~s~-~~~~~~~~~v~~~L~~~~--~~  387 (829)
T KOG0576|consen  322 SALEMTVS----EIALEQYQFAYPLRKETRPLAELHS---SYKVHRD----NILGSE-EEVKLLDFAVPPQLTRTM--KP  387 (829)
T ss_pred             ccccCChh----hHhhhhhhhhhhhhhhccccccccc---ccccCcc----cccccc-cccccccccCCcccCccc--cc
Confidence            22211111    1123344455666777889999998   4457888    776655 678999999987665543  23


Q ss_pred             cccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCCh
Q 048419          494 THIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEP  538 (653)
Q Consensus       494 ~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~  538 (653)
                      ....+++.++|||....+.+..+-|+|+.|+-..+|.-|-.|-..
T Consensus       388 ~t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr~~  432 (829)
T KOG0576|consen  388 RTAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPRSS  432 (829)
T ss_pred             ccCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCCCC
Confidence            445789999999999999999999999999877788777766543

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=97.97  E-value=0.00011  Score=70.90  Aligned_cols=129  Identities=22%  Similarity=0.357  Sum_probs=92.0

Q ss_pred             cceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc----------------hhhHHHHHHHHHHHhhcC------CCceee
Q 048419          334 EQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS----------------QQGMKEFVAEIMSMGRLR------HRNLVQ  391 (653)
Q Consensus       334 ~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~----------------~~~~~~~~~E~~~l~~l~------H~niv~  391 (653)
                      ....||+|+.-.||.  ++. +....||+.....                ....++..+|+....++.      +.+|.+
T Consensus         5 ~~~~i~~G~~R~cy~--HP~-dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r   81 (199)
T PF10707_consen    5 ESDLIAQGGERDCYQ--HPD-DPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPR   81 (199)
T ss_pred             CCcccccCCCceEEE--CCC-CCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCccccccc
Confidence            456899999999995  443 4568899886554                223466777777666665      788999


Q ss_pred             eeeeecccceeEEEEeccCC--C----CchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCc
Q 048419          392 LHGWCRKQDELLLVYDYVPN--G----SLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSN  465 (653)
Q Consensus       392 l~g~~~~~~~~~lV~E~~~~--g----sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~N  465 (653)
                      ++|+..+.-..-+|+|.+.+  |    +|.+++....      ++.    .+...+-+-..||-+   ..|+.+|++|.|
T Consensus        82 ~~G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~~~------~~~----~~~~~L~~f~~~l~~---~~Iv~~dl~~~N  148 (199)
T PF10707_consen   82 FYGFVETNLGLGLVVELIRDADGNISPTLEDYLKEGG------LTE----ELRQALDEFKRYLLD---HHIVIRDLNPHN  148 (199)
T ss_pred             EeEEEecCCceEEEEEEEECCCCCcCccHHHHHHcCC------ccH----HHHHHHHHHHHHHHH---cCCeecCCCccc
Confidence            99999999999999998643  2    5666764332      443    333444455567777   899999999999


Q ss_pred             EEEcCC--C--cEEEEe
Q 048419          466 ILLDTY--L--NAKLGD  478 (653)
Q Consensus       466 Ill~~~--~--~~kl~D  478 (653)
                      |++...  +  .+.|+|
T Consensus       149 Iv~~~~~~~~~~lvlID  165 (199)
T PF10707_consen  149 IVVQRRDSGEFRLVLID  165 (199)
T ss_pred             EEEEecCCCceEEEEEe
Confidence            999432  2  577777

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=97.95  E-value=7.4e-05  Score=74.06  Aligned_cols=145  Identities=20%  Similarity=0.228  Sum_probs=84.9

Q ss_pred             ceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCC--ceeeeeeeeccc---ceeEEEEecc
Q 048419          335 QNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHR--NLVQLHGWCRKQ---DELLLVYDYV  409 (653)
Q Consensus       335 ~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~--niv~l~g~~~~~---~~~~lV~E~~  409 (653)
                      .+.|+.|..+.||+....+  ..+++|.....  .....+..|..+++.+...  .+.+++.++...   ...+++|+++
T Consensus         2 i~~l~~G~~n~~~~v~~~~--~~~vlK~~~~~--~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i   77 (239)
T PF01636_consen    2 IRPLSGGFSNRVYRVTTDD--GRYVLKFYRPP--DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYI   77 (239)
T ss_dssp             EEEEEESSSSEEEEEEETT--SEEEEEEESSH--HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEE
T ss_pred             CccCCCCCeeeEEEEEECC--cEEEEEEeCCC--CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEe
Confidence            4679999999999998865  48999997443  4556777888888888533  345666644332   3468999999


Q ss_pred             CCCCchh----------------hhh---cccccccccchhh--------hHHH------------HHHHHHH-HHHHHH
Q 048419          410 PNGSLDK----------------LLF---DKDHKLRKLLTWD--------QRYK------------ILIGIAQ-SLLYLH  449 (653)
Q Consensus       410 ~~gsL~~----------------~l~---~~~~~~~~~l~~~--------~~~~------------i~~~ia~-~L~yLH  449 (653)
                      ++..+..                .+.   ...........+.        ....            ....+.+ .+..++
T Consensus        78 ~g~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (239)
T PF01636_consen   78 PGRPLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERLLQELE  157 (239)
T ss_dssp             SSEEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHHHHHHHHHH
Confidence            9988777                111   1100000000000        0000            0112222 334444


Q ss_pred             hc----CCCCeEecCCCCCcEEEc-CCCcEEEEeecCcc
Q 048419          450 EE----CNQRVVHRDVKPSNILLD-TYLNAKLGDFGLAK  483 (653)
Q Consensus       450 ~~----~~~~ivH~Dlkp~NIll~-~~~~~kl~DfGla~  483 (653)
                      +.    ....++|+|+.|.|||++ +++.+-|+||+.+.
T Consensus       158 ~~~~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~  196 (239)
T PF01636_consen  158 ALLPKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAG  196 (239)
T ss_dssp             HHHHCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-E
T ss_pred             hhhccCCCcEEEEeccccccceeeeccceeEEEecccce
Confidence            32    346799999999999999 66666899998765

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=97.92  E-value=0.00011  Score=73.84  Aligned_cols=140  Identities=18%  Similarity=0.092  Sum_probs=84.2

Q ss_pred             eeeeCc-EEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcC-CCceeeeeeeecccceeEEEEeccCCCCch
Q 048419          338 VGSGGF-GRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLR-HRNLVQLHGWCRKQDELLLVYDYVPNGSLD  415 (653)
Q Consensus       338 LG~G~f-g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lV~E~~~~gsL~  415 (653)
                      |-.|.. ..||+....  +..+.||+.....   ...+.+|+++++.+. +--+.+++++....+..++|||+++|.+|.
T Consensus         6 ~~~g~~~~~v~~~~~~--~~~~~vk~~~~~~---~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~   80 (244)
T cd05150           6 VTEGQSGATVYRLDGK--NPGLYLKIAPSGP---TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVPAA   80 (244)
T ss_pred             cCCCCCcCeEEEEcCC--CCcEEEEecCCCc---ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCccHh
Confidence            444444 789998764  4678888875432   345677888888884 444567777776666789999999998776


Q ss_pred             hhhh-------------------cccccccccch--hhhHHHHHH--------------------HHHHHHHHHHh----
Q 048419          416 KLLF-------------------DKDHKLRKLLT--WDQRYKILI--------------------GIAQSLLYLHE----  450 (653)
Q Consensus       416 ~~l~-------------------~~~~~~~~~l~--~~~~~~i~~--------------------~ia~~L~yLH~----  450 (653)
                      ....                   ..... .....  ...+.....                    .+...+..|-.    
T Consensus        81 ~~~~~~~~~~~~~~l~~~l~~lH~i~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  159 (244)
T cd05150          81 ALWEELEPERLVDALAEALRRLHALPVA-DCPFDRRLDRRLAEARARVENGLVDEDDFDDERRGWSAEELYAELEATRPA  159 (244)
T ss_pred             HhhcccCHHHHHHHHHHHHHHHhcCCcc-cCCcchhHHHHHHHHHHHHhcCCcChhhCcHhhcCCCHHHHHHHHHhhCCC
Confidence            4421                   10000 00000  000000000                    01111222211    


Q ss_pred             cCCCCeEecCCCCCcEEEcCCCcEEEEeecCcc
Q 048419          451 ECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK  483 (653)
Q Consensus       451 ~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~  483 (653)
                      .....++|+|+.|.|||++++....|+||+.+.
T Consensus       160 ~~~~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~  192 (244)
T cd05150         160 EEDLVVTHGDACLPNIIVDPGKFSGFIDLGRLG  192 (244)
T ss_pred             cCceEEECCCCCCccEEEeCCcEEEEEEccccc
Confidence            112568999999999999998778899998775

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>PLN02876 acyl-CoA dehydrogenase

Probab=97.91  E-value=0.00013  Score=86.29  Aligned_cols=150  Identities=14%  Similarity=0.226  Sum_probs=93.0

Q ss_pred             ceeeeeeCcEEEEEEEeCCCC--cEEEEEEeccCc-hhhHHHHHHHHHHHhhcC-CCce--eeeeeeeccc---ceeEEE
Q 048419          335 QNLVGSGGFGRVYRGLMPSLG--LEVAIKRIGHNS-QQGMKEFVAEIMSMGRLR-HRNL--VQLHGWCRKQ---DELLLV  405 (653)
Q Consensus       335 ~~~LG~G~fg~Vy~~~~~~~~--~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-H~ni--v~l~g~~~~~---~~~~lV  405 (653)
                      .+.++.|.+..+|+......+  ..+++|+..... ......+.+|.++++.|. |.++  .+++.+|.+.   +..++|
T Consensus        43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flV  122 (822)
T PLN02876         43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYI  122 (822)
T ss_pred             EEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEE
Confidence            567899999999998775432  467888764322 123456789999999995 6664  7888888765   467899


Q ss_pred             EeccCCCCchhh-----------------------hhccccc------ccccc--------hhhhHHHH---------HH
Q 048419          406 YDYVPNGSLDKL-----------------------LFDKDHK------LRKLL--------TWDQRYKI---------LI  439 (653)
Q Consensus       406 ~E~~~~gsL~~~-----------------------l~~~~~~------~~~~l--------~~~~~~~i---------~~  439 (653)
                      |||++|..+.+.                       |+.....      ...+.        .|...+.-         .-
T Consensus       123 ME~v~G~~~~~~~~~~~~~~~r~~l~~~l~~~La~LH~vd~~~~gl~~~g~~~~~~~~~l~~w~~~~~~~~~~~~~~~~~  202 (822)
T PLN02876        123 MEYLEGRIFVDPKLPGVAPERRRAIYRATAKVLAALHSADVDAIGLGKYGRRDNYCKRQVERWAKQYLASTGEGKPPRNP  202 (822)
T ss_pred             EEecCCcccCCccCCCCCHHHHHHHHHHHHHHHHHHhCCCchhcChhhcCCCCchHHHHHHHHHHHHHHhhcccCCCCCh
Confidence            999988654321                       1111000      00000        11111110         11


Q ss_pred             HHHHHHHHHHhcCC--------CCeEecCCCCCcEEEcCC-Cc-EEEEeecCccc
Q 048419          440 GIAQSLLYLHEECN--------QRVVHRDVKPSNILLDTY-LN-AKLGDFGLAKI  484 (653)
Q Consensus       440 ~ia~~L~yLH~~~~--------~~ivH~Dlkp~NIll~~~-~~-~kl~DfGla~~  484 (653)
                      .+.+.+.+|.....        ..+||+|+++.||+++.+ .. .-|.||+++..
T Consensus       203 ~~~~l~~wL~~~~P~~~~~~~~~~LvHGD~~~~Nvl~~~~~~~v~aVLDWE~a~~  257 (822)
T PLN02876        203 KMLELIDWLRENIPAEDSTGAGTGIVHGDFRIDNLVFHPTEDRVIGILDWELSTL  257 (822)
T ss_pred             hHHHHHHHHHhcCCCccccCCCcceEecCcccccEEEcCCCCeEEEEEeeecccc
Confidence            23344566644322        359999999999999753 33 57999999875

>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]

Probab=97.91  E-value=5.4e-05  Score=83.04  Aligned_cols=159  Identities=21%  Similarity=0.280  Sum_probs=99.1

Q ss_pred             CCcccCHHHHHHhhc------------CcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhh-------------
Q 048419          316 GARRFKYAELASVTK------------GFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQG-------------  370 (653)
Q Consensus       316 ~~~~f~~~el~~at~------------~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~-------------  370 (653)
                      ..+.++++|+...-+            .|+ .+.||.-+.|.||+|++++ |+.||||+-+..-+..             
T Consensus       136 ~~Pp~~~ee~~~i~e~ElG~~ie~if~~f~-~~piaaASlaQVhrA~L~~-G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~  213 (538)
T KOG1235|consen  136 QAPPFPWEEAFKIFEEELGAPIEDIFSEFD-EEPIAAASLAQVHRARLKN-GEDVAVKVQHPGLEKLIMLDLRNLRLLAK  213 (538)
T ss_pred             cCCCCCHHHHHHHHHHHhCCCHHHHHHhcC-cchhhhcchhheEEEEecC-CCEEEEEecCcChHHHHHHHHHHHHHHHH
Confidence            345677777654432            233 3579999999999999986 9999999975432111             


Q ss_pred             ------------------HH------HHHHHHHHHhhc----CCCc------eeeeeeeecccceeEEEEeccCCCCchh
Q 048419          371 ------------------MK------EFVAEIMSMGRL----RHRN------LVQLHGWCRKQDELLLVYDYVPNGSLDK  416 (653)
Q Consensus       371 ------------------~~------~~~~E~~~l~~l----~H~n------iv~l~g~~~~~~~~~lV~E~~~~gsL~~  416 (653)
                                        .+      +|.+|.+-..+.    +|-+      |.+++-.+  .....|+||||+|..+.+
T Consensus       214 ~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA~Nae~~~~~f~~~~~~~~V~VP~Vy~~~--st~RVLtME~~~G~~i~D  291 (538)
T KOG1235|consen  214 VLQKFFPDFDLVWLVDEIAKSLPQELDFTKEAKNAERFRENFKDFSLLTYVLVPKVYWDL--STKRVLTMEYVDGIKIND  291 (538)
T ss_pred             HHHHhCcCCchhhHHHHHHhhhHhhcchHHHHHhHHHHHHHHHhcccccceeCCeehhhc--CcceEEEEEecCCccCCC
Confidence                              01      244455433333    3444      22332222  235689999999998877


Q ss_pred             hhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcC----CCcEEEEeecCcccccC
Q 048419          417 LLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDT----YLNAKLGDFGLAKIYEH  487 (653)
Q Consensus       417 ~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~----~~~~kl~DfGla~~~~~  487 (653)
                      .-.-..    ..++..   .|+..+.++  |++.....|++|+|-.|.||+++.    ++.+.+-|||+......
T Consensus       292 l~~i~~----~gi~~~---~i~~~l~~~--~~~qIf~~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~  357 (538)
T KOG1235|consen  292 LDAIDK----RGISPH---DILNKLVEA--YLEQIFKTGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISH  357 (538)
T ss_pred             HHHHHH----cCCCHH---HHHHHHHHH--HHHHHHhcCCccCCCCCCcEEEecCCCCCccEEEEcccccccccH
Confidence            643221    113333   333334333  222222368999999999999983    67899999999986644

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=97.88  E-value=0.00025  Score=69.62  Aligned_cols=154  Identities=19%  Similarity=0.173  Sum_probs=95.3

Q ss_pred             ccCHHHHHHhhcCcCcceeee---eeCcEEEEEEEeCCCCcEEEEEEeccCchhhH-------------------HH---
Q 048419          319 RFKYAELASVTKGFGEQNLVG---SGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGM-------------------KE---  373 (653)
Q Consensus       319 ~f~~~el~~at~~f~~~~~LG---~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~-------------------~~---  373 (653)
                      ..+...+....++..+....|   .|--+.||+|... ++..+|||++........                   ++   
T Consensus        34 ~~t~~~l~~L~~rg~i~~~~g~istGKEA~Vy~a~~~-~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~  112 (268)
T COG1718          34 KRTLETLRRLLSRGVITELVGCISTGKEANVYLAETG-DGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVF  112 (268)
T ss_pred             hHHHHHHHHHhcCCceeeeEeeecCCcceEEEeeccC-CCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHH
Confidence            345566666666666665554   5667789998773 478999999854321110                   00   


Q ss_pred             --HHHHHHHHhhcCCC--ceeeeeeeecccceeEEEEeccCCCCc-hhhhhcccccccccchhhhHHHHHHHHHHHHHHH
Q 048419          374 --FVAEIMSMGRLRHR--NLVQLHGWCRKQDELLLVYDYVPNGSL-DKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYL  448 (653)
Q Consensus       374 --~~~E~~~l~~l~H~--niv~l~g~~~~~~~~~lV~E~~~~gsL-~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yL  448 (653)
                        ...|...|+++...  .+.+-+++.    .-.|||||+....+ .-.|..      -.+..++...+..++++.+.-|
T Consensus       113 ~W~~kEf~NL~R~~eAGVrvP~Pi~~~----~nVLvMEfIg~~g~pAP~LkD------v~~e~~e~~~~~~~~v~~~~~l  182 (268)
T COG1718         113 AWARKEFRNLKRAYEAGVRVPEPIAFR----NNVLVMEFIGDDGLPAPRLKD------VPLELEEAEGLYEDVVEYMRRL  182 (268)
T ss_pred             HHHHHHHHHHHHHHHcCCCCCCceeec----CCeEEEEeccCCCCCCCCccc------CCcCchhHHHHHHHHHHHHHHH
Confidence              12355555555322  222222221    23799999965311 112211      1123335666777777777666


Q ss_pred             HhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccccc
Q 048419          449 HEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE  486 (653)
Q Consensus       449 H~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~  486 (653)
                      -..  .++||+||..-|||+. ++.+.|+|++-+....
T Consensus       183 ~~~--a~LVHgDLSEyNiL~~-~~~p~iID~~QaV~~~  217 (268)
T COG1718         183 YKE--AGLVHGDLSEYNILVH-DGEPYIIDVSQAVTID  217 (268)
T ss_pred             HHh--cCcccccchhhheEEE-CCeEEEEECccccccC
Confidence            553  6899999999999999 8899999999887544

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=97.77  E-value=0.00028  Score=67.66  Aligned_cols=125  Identities=28%  Similarity=0.411  Sum_probs=90.5

Q ss_pred             cCcCcceeeeeeCc-EEEEEEEeCCCCcEEEEEEecc---Cch------------------hhHHHHHHHHHHHhhcC--
Q 048419          330 KGFGEQNLVGSGGF-GRVYRGLMPSLGLEVAIKRIGH---NSQ------------------QGMKEFVAEIMSMGRLR--  385 (653)
Q Consensus       330 ~~f~~~~~LG~G~f-g~Vy~~~~~~~~~~vavK~~~~---~~~------------------~~~~~~~~E~~~l~~l~--  385 (653)
                      ..++..+.||.|.- |.|||++..  |..+|+|.+..   ...                  .....|..|.+...+|+  
T Consensus        37 ~~I~flefLg~g~~~~~V~kv~I~--g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~  114 (207)
T PF13095_consen   37 DDIEFLEFLGHGSHDGYVFKVEID--GRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEA  114 (207)
T ss_pred             CcEeeeeecCCCCceeEEEEEEEC--CeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhc
Confidence            66777899999999 999999996  67999999321   100                  11236888999888885  


Q ss_pred             -CCce--eeeeeeeccc------------------ceeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHH
Q 048419          386 -HRNL--VQLHGWCRKQ------------------DELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQS  444 (653)
Q Consensus       386 -H~ni--v~l~g~~~~~------------------~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~  444 (653)
                       +.++  |+.+||..=.                  ....||.||.+...              .+.    .+-+.+|.+-
T Consensus       115 ~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~--------------~~~----~~~~~~~~~d  176 (207)
T PF13095_consen  115 GREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP--------------PLQ----IRDIPQMLRD  176 (207)
T ss_pred             cccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc--------------ccc----hhHHHHHHHH
Confidence             4456  9999987211                  12467888776532              122    2334567777


Q ss_pred             HHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCc
Q 048419          445 LLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLA  482 (653)
Q Consensus       445 L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla  482 (653)
                      |..+|.   .+|+-+|+++.|..     .-||+|||.+
T Consensus       177 l~~~~k---~gI~~~Dv~~~ny~-----~G~lvDfs~~  206 (207)
T PF13095_consen  177 LKILHK---LGIVPRDVKPRNYR-----GGKLVDFSSS  206 (207)
T ss_pred             HHHHHH---CCeeeccCcccccc-----CCEEEecccC
Confidence            888999   99999999999987     5699999854

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=97.72  E-value=0.00022  Score=66.18  Aligned_cols=128  Identities=20%  Similarity=0.228  Sum_probs=87.8

Q ss_pred             cceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceee-eeeeecccceeEEEEeccCCC
Q 048419          334 EQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQ-LHGWCRKQDELLLVYDYVPNG  412 (653)
Q Consensus       334 ~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~-l~g~~~~~~~~~lV~E~~~~g  412 (653)
                      ..+.|++|++|.||+|.+.  |..+|+|+-+..++  ...+..|+++|..+.-.++.+ ++.|-.+    .+.|||+.|-
T Consensus        26 v~~~L~KG~~s~Vyl~~~~--~~~~a~Kvrr~ds~--r~~l~kEakiLeil~g~~~~p~vy~yg~~----~i~me~i~G~   97 (201)
T COG2112          26 VEKELAKGTTSVVYLGEWR--GGEVALKVRRRDSP--RRNLEKEAKILEILAGEGVTPEVYFYGED----FIRMEYIDGR   97 (201)
T ss_pred             hhhhhhcccccEEEEeecc--CceEEEEEecCCcc--hhhHHHHHHHHHHhhhcCCCceEEEechh----hhhhhhhcCc
Confidence            3568999999999999996  56899998755443  467889999999998766654 3333322    3459999887


Q ss_pred             CchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCC-CCcEEEcCCCcEEEEeecCccc
Q 048419          413 SLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVK-PSNILLDTYLNAKLGDFGLAKI  484 (653)
Q Consensus       413 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlk-p~NIll~~~~~~kl~DfGla~~  484 (653)
                      .|.++-...        +    .+-...++..---|..   .||-|+.|. |...+|-.+..+.|+||..|+.
T Consensus        98 ~L~~~~~~~--------~----rk~l~~vlE~a~~LD~---~GI~H~El~~~~k~vlv~~~~~~iIDFd~At~  155 (201)
T COG2112          98 PLGKLEIGG--------D----RKHLLRVLEKAYKLDR---LGIEHGELSRPWKNVLVNDRDVYIIDFDSATF  155 (201)
T ss_pred             chhhhhhcc--------c----HHHHHHHHHHHHHHHH---hccchhhhcCCceeEEecCCcEEEEEccchhh
Confidence            886654321        1    1223334454334444   788898887 4444555555999999998874

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=97.71  E-value=0.00036  Score=69.77  Aligned_cols=74  Identities=16%  Similarity=0.147  Sum_probs=47.2

Q ss_pred             eeeeeeCcE-EEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCC---ceeeeeeeecccc---eeEEEEec
Q 048419          336 NLVGSGGFG-RVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHR---NLVQLHGWCRKQD---ELLLVYDY  408 (653)
Q Consensus       336 ~~LG~G~fg-~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~---niv~l~g~~~~~~---~~~lV~E~  408 (653)
                      +.|+.||.. .||+.     +..+++|.....  .....+..|.+.+..|...   .+.++++.+...+   ..+++||+
T Consensus         3 ~~~~~gG~~n~vy~~-----~~~~VlR~~~~~--~~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~l~~~   75 (235)
T cd05155           3 EPVDSGGTDNATFRL-----GDDMSVRLPSAA--GYAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWSVYRW   75 (235)
T ss_pred             eeccCCCcccceEEc-----CCceEEEcCCcc--chHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceEEEEe
Confidence            467777776 59975     235777875432  2345788899999888532   3444454443322   34889999


Q ss_pred             cCCCCchh
Q 048419          409 VPNGSLDK  416 (653)
Q Consensus       409 ~~~gsL~~  416 (653)
                      ++|.++.+
T Consensus        76 i~G~~l~~   83 (235)
T cd05155          76 LEGETATA   83 (235)
T ss_pred             ecCCCCCc
Confidence            99987754

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=97.60  E-value=0.00074  Score=67.36  Aligned_cols=76  Identities=14%  Similarity=0.197  Sum_probs=48.4

Q ss_pred             ceeeeeeCcEEEEEEEeCC-CCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCce-eeeeeeecccceeEEEEeccCCC
Q 048419          335 QNLVGSGGFGRVYRGLMPS-LGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNL-VQLHGWCRKQDELLLVYDYVPNG  412 (653)
Q Consensus       335 ~~~LG~G~fg~Vy~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~g~~~~~~~~~lV~E~~~~g  412 (653)
                      .+.|..|-...+|+....+ .+..|++|........ .-...+|+.+++.+...++ .++++.+.  +  .++|||++|.
T Consensus         3 i~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~-~~d~~~E~~~~~~l~~~gl~P~v~~~~~--~--~~l~e~i~G~   77 (235)
T cd05157           3 FKRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTEL-IIDRERELRIHKLLSKHGLAPKLYATFQ--N--GLIYEFIPGR   77 (235)
T ss_pred             EEEcCCcccceEEEEEcCCCCCCeEEEEEccCCccc-eecHHHHHHHHHHHHhCCCCCeEEEEeC--C--cEEEEeeCCC
Confidence            3567778888999987643 3567889977543221 1223468888888854333 44444332  2  4799999987


Q ss_pred             Cch
Q 048419          413 SLD  415 (653)
Q Consensus       413 sL~  415 (653)
                      ++.
T Consensus        78 ~l~   80 (235)
T cd05157          78 TLE   80 (235)
T ss_pred             cCC
Confidence            764

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>PRK10593 hypothetical protein; Provisional

Probab=97.58  E-value=0.00099  Score=69.06  Aligned_cols=77  Identities=9%  Similarity=0.027  Sum_probs=56.7

Q ss_pred             cceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCC---Cceeeeeeeeccc---ceeEEEEe
Q 048419          334 EQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRH---RNLVQLHGWCRKQ---DELLLVYD  407 (653)
Q Consensus       334 ~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H---~niv~l~g~~~~~---~~~~lV~E  407 (653)
                      ..+.||.|..+.||+....+ + .+.+|..+...  ....+..|.+.|+.|..   -.+.+++++|...   +..+||||
T Consensus        18 ~~~~i~~G~~~~vy~~~~~~-~-~~~~k~~~~~~--~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVmE   93 (297)
T PRK10593         18 RVECISEQPYAALWALYDSQ-G-NPMPLMARSFS--TPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLLE   93 (297)
T ss_pred             eeeecCCccceeEEEEEcCC-C-CEEEEEecccc--cchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEEe
Confidence            35689999999999986543 3 47777753311  23578899999998853   3678888887543   56899999


Q ss_pred             ccCCCCc
Q 048419          408 YVPNGSL  414 (653)
Q Consensus       408 ~~~~gsL  414 (653)
                      ++++.++
T Consensus        94 ~i~G~~~  100 (297)
T PRK10593         94 RLRGVSV  100 (297)
T ss_pred             ccCCEec
Confidence            9998765

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=97.48  E-value=0.00049  Score=80.08  Aligned_cols=198  Identities=16%  Similarity=0.137  Sum_probs=133.2

Q ss_pred             HHHHHHHHHhhcCCCceeeeeeeeccccee----EEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHH
Q 048419          373 EFVAEIMSMGRLRHRNLVQLHGWCRKQDEL----LLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYL  448 (653)
Q Consensus       373 ~~~~E~~~l~~l~H~niv~l~g~~~~~~~~----~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yL  448 (653)
                      ....|+..+.++.|+|++.++.|-.+....    .+..|+|+.-++...+....     .++....+.+..++..||.|+
T Consensus       228 ~~E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~v~-----~i~~~~~r~~~~~~~~GL~~~  302 (1351)
T KOG1035|consen  228 TTEIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQSVG-----SIPLETLRILHQKLLEGLAYL  302 (1351)
T ss_pred             HHHHHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhhcc-----ccCHHHHHHHHHHHhhhHHHH
Confidence            344577788889999999999987665432    34567888888888876643     477788888999999999999


Q ss_pred             HhcCCCCeEecCCCCC---cEEEcCCCcEEEE--eecCcccccCCCCCcccccccCCcccCccccccCCCCC--ccceee
Q 048419          449 HEECNQRVVHRDVKPS---NILLDTYLNAKLG--DFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATT--STDVYS  521 (653)
Q Consensus       449 H~~~~~~ivH~Dlkp~---NIll~~~~~~kl~--DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~--ksDV~s  521 (653)
                      |+   ....|.-+..+   +--.+..+...++  ||+..........  ......+..+.+||......+..  ..|+|.
T Consensus       303 h~---~~l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~--~~~~~~~~~~~~~e~~~~~~~~~~r~~dL~~  377 (1351)
T KOG1035|consen  303 HS---LSLEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEK--SFSDLLAEIRNADEDLKENTAKKSRLTDLWC  377 (1351)
T ss_pred             HH---hccceeEEecccccccccCccceeecchhhhcccccCCCccc--chhhcCccccccccccccccchhhhhhHHHH
Confidence            99   44444444333   3333555666666  8877765543221  11223455688888877665554  479999


Q ss_pred             hHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHH
Q 048419          522 YGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVV  601 (653)
Q Consensus       522 ~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  601 (653)
                      +|..+..+..|..+-.....                  +..+++.    ..   ...+.+...+|+..++++|++..+++
T Consensus       378 lgll~~~~~~~~~i~~~~~~------------------~~~~l~~----~~---~~~~~d~~~~~~~~~~~~Rl~~~~ll  432 (1351)
T KOG1035|consen  378 LGLLLLQLSQGEDISEKSAV------------------PVSLLDV----LS---TSELLDALPKCLDEDSEERLSALELL  432 (1351)
T ss_pred             HHHHHhhhhhcCcccccccc------------------hhhhhcc----cc---chhhhhhhhhhcchhhhhccchhhhh
Confidence            99999999988765432111                  0011110    00   11455677789999999999999999


Q ss_pred             HHHc
Q 048419          602 EFLL  605 (653)
Q Consensus       602 ~~L~  605 (653)
                      .+.-
T Consensus       433 ~~~f  436 (1351)
T KOG1035|consen  433 THPF  436 (1351)
T ss_pred             hchh
Confidence            8763

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=97.47  E-value=0.0018  Score=69.33  Aligned_cols=77  Identities=12%  Similarity=0.093  Sum_probs=54.2

Q ss_pred             ceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC-----c--hhhHHHHHHHHHHHhhcC---CCceeeeeeeecccceeEE
Q 048419          335 QNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN-----S--QQGMKEFVAEIMSMGRLR---HRNLVQLHGWCRKQDELLL  404 (653)
Q Consensus       335 ~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~-----~--~~~~~~~~~E~~~l~~l~---H~niv~l~g~~~~~~~~~l  404 (653)
                      .+.||.|.+..||++...+.++.++||.-...     .  +...+.+..|.+.|..+.   -.++.+++.+.  .+..++
T Consensus        31 ~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~D--~~~~~l  108 (401)
T PRK09550         31 AREIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHYD--EELAVT  108 (401)
T ss_pred             eeEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEEC--CCCCEE
Confidence            46799999999999998654368999985311     1  223456777888888763   24566777763  355789


Q ss_pred             EEeccCCCC
Q 048419          405 VYDYVPNGS  413 (653)
Q Consensus       405 V~E~~~~gs  413 (653)
                      ||||+++..
T Consensus       109 VME~L~~~~  117 (401)
T PRK09550        109 VMEDLSDHK  117 (401)
T ss_pred             EEecCCCcc
Confidence            999998643

>TIGR02721 ycfN_thiK thiamine kinase

Probab=97.45  E-value=0.00071  Score=68.55  Aligned_cols=139  Identities=14%  Similarity=0.044  Sum_probs=77.5

Q ss_pred             eeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCce-eeeeeeecccceeEEEEeccCCCCchh
Q 048419          338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNL-VQLHGWCRKQDELLLVYDYVPNGSLDK  416 (653)
Q Consensus       338 LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~g~~~~~~~~~lV~E~~~~gsL~~  416 (653)
                      +..|-...+|+...  ++..+++|........-.-...+|..+++.+....+ .+++..+.    -++|+||++|..+..
T Consensus         4 ~~~G~tn~~y~~~~--~~~~~vlR~~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~i~~~~----~~~v~e~i~G~~~~~   77 (256)
T TIGR02721         4 LSGGLTNRSWRIEH--PGISFVWRPQSPVCKALGVDRQREYQILQALSALGLAPKPILVNE----HWLLVEWLEGEVITL   77 (256)
T ss_pred             CCCcCcCCeEEEEe--CCccEEEeeCCcccccccCcHHHHHHHHHHHHhcCCCCceEEEeC----CEEEEEeccCccccc
Confidence            45577778998874  366788987644322211134678888888864433 33444332    268999999877643


Q ss_pred             h-----------------hhcccccccccchhhhH-HHHHHH---------HHHHHHHHHhc-----CCCCeEecCCCCC
Q 048419          417 L-----------------LFDKDHKLRKLLTWDQR-YKILIG---------IAQSLLYLHEE-----CNQRVVHRDVKPS  464 (653)
Q Consensus       417 ~-----------------l~~~~~~~~~~l~~~~~-~~i~~~---------ia~~L~yLH~~-----~~~~ivH~Dlkp~  464 (653)
                      .                 |+..... ...++...+ .....+         +...+..+-..     ....++|+|+.|.
T Consensus        78 ~~~~~~~~~~~la~~l~~lH~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H~Dl~~~  156 (256)
T TIGR02721        78 DQFVALDLLLELAALLHQLHSQPRF-GYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLHMDVHAY  156 (256)
T ss_pred             ccccCchhHHHHHHHHHHHhCCCCC-CCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeecCCCCcC
Confidence            2                 1111100 111111111 111111         11112222111     1246899999999


Q ss_pred             cEEEcCCCcEEEEeecCccc
Q 048419          465 NILLDTYLNAKLGDFGLAKI  484 (653)
Q Consensus       465 NIll~~~~~~kl~DfGla~~  484 (653)
                      ||++++++ +.|+||+.+..
T Consensus       157 Nil~~~~~-~~lIDwE~a~~  175 (256)
T TIGR02721       157 NLVVTPQG-LKLIDWEYASD  175 (256)
T ss_pred             cEEEeCCC-CEEEeccccCc
Confidence            99998877 78999998764

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=97.28  E-value=0.0021  Score=66.87  Aligned_cols=144  Identities=23%  Similarity=0.265  Sum_probs=83.9

Q ss_pred             eeeeeeCcEEEEEEEeCC------CCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCce-eeeeeeecccceeEEEEec
Q 048419          336 NLVGSGGFGRVYRGLMPS------LGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNL-VQLHGWCRKQDELLLVYDY  408 (653)
Q Consensus       336 ~~LG~G~fg~Vy~~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~g~~~~~~~~~lV~E~  408 (653)
                      +.|..|-...+|+....+      .+..+++|+...... ......+|.+++..+....+ .++++++. .   .+|+||
T Consensus         4 ~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~~-~~~~r~~E~~~~~~l~~~g~~P~~~~~~~-~---~~v~e~   78 (302)
T cd05156           4 SKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSVE-LLIDRERELVVFARLSERNLGPKLYGIFP-N---GRIEEF   78 (302)
T ss_pred             EEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCCc-ceechHHHHHHHHHHHhCCCCCceEEEeC-C---Cchhhe
Confidence            456666667899987653      257899999755432 22345678888888854333 34555543 2   358999


Q ss_pred             cCCCCchhhh-----------------hcccccc------cccchhhhHHH--------------------------HHH
Q 048419          409 VPNGSLDKLL-----------------FDKDHKL------RKLLTWDQRYK--------------------------ILI  439 (653)
Q Consensus       409 ~~~gsL~~~l-----------------~~~~~~~------~~~l~~~~~~~--------------------------i~~  439 (653)
                      ++|..+....                 +......      ....-|..+.+                          +..
T Consensus        79 i~G~~l~~~~~~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (302)
T cd05156          79 IPSRTLTTEELRDPDISAEIARRMAKLHSIVVPLSPEERDLTPAIWKLLKQWLDLAETVIEIVDSDSEKLLEVELSLFLE  158 (302)
T ss_pred             eCCCcCCHhHcCCcHHHHHHHHHHHHhhCCCCCCCCCcCcccchHHHHHHHHHHHhhhhhhhcccchhhhhhhhHHHHHH
Confidence            9887765321                 1111100      00011111111                          112


Q ss_pred             HHHHHHHHHHh------cCCCCeEecCCCCCcEEEcCC----CcEEEEeecCccc
Q 048419          440 GIAQSLLYLHE------ECNQRVVHRDVKPSNILLDTY----LNAKLGDFGLAKI  484 (653)
Q Consensus       440 ~ia~~L~yLH~------~~~~~ivH~Dlkp~NIll~~~----~~~kl~DfGla~~  484 (653)
                      .+...+..|..      .....++|+|+.+.||+++++    +.++++||..+..
T Consensus       159 ~~~~~~~~l~~~~~~~~~~~~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~~  213 (302)
T cd05156         159 DEAKYLRFLLESTSEESGSPVVFCHNDLQEGNILLLNPSSETKKLVLIDFEYASY  213 (302)
T ss_pred             HHHHHHHHHHhhccCCCCCCceEEecCCCcCeEEecCCCCCCCcEEEEeeCCCCC
Confidence            22223334432      134679999999999999875    8899999998764

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>PRK05231 homoserine kinase; Provisional

Probab=97.25  E-value=0.005  Score=64.52  Aligned_cols=144  Identities=14%  Similarity=0.134  Sum_probs=77.3

Q ss_pred             eeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCc--eeeeeee------ecccceeEEEEe
Q 048419          336 NLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRN--LVQLHGW------CRKQDELLLVYD  407 (653)
Q Consensus       336 ~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n--iv~l~g~------~~~~~~~~lV~E  407 (653)
                      +.|+.|....+|+....+ | .+++|+......   +....|+..+..|...+  +.+.+..      ....+..++++|
T Consensus        28 ~~l~~G~~n~~y~v~t~~-g-~~vLK~~~~~~~---~~l~~~~~~l~~L~~~glpvP~~i~~~~G~~~~~~~g~~~~l~~  102 (319)
T PRK05231         28 KGIAEGIENSNFFLTTTQ-G-EYVLTLFERLTA---EDLPFFLGLMQHLAARGVPVPAPVARRDGAALGELAGKPAAIVT  102 (319)
T ss_pred             chhccccccceEEEEeCC-C-cEEEEEeccCCh---HHhHHHHHHHHHHHHCCCCCCcceeCCCCCEeeeeCCEEEEEEE
Confidence            456677777899987643 3 689998752222   33334555555553222  2333321      122456789999


Q ss_pred             ccCCCCchh-----------h---hhcccccc------cccchh-hhHHH------------HH-HHHHHHHHHHHh---
Q 048419          408 YVPNGSLDK-----------L---LFDKDHKL------RKLLTW-DQRYK------------IL-IGIAQSLLYLHE---  450 (653)
Q Consensus       408 ~~~~gsL~~-----------~---l~~~~~~~------~~~l~~-~~~~~------------i~-~~ia~~L~yLH~---  450 (653)
                      |++|..+..           .   ++......      ...+.| .....            .. ..+...+..+.+   
T Consensus       103 ~l~G~~~~~~~~~~~~~~G~~LA~lH~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  182 (319)
T PRK05231        103 FLEGKWPRAPTAAHCAEVGEMLARMHLAGRDFPLERPNLRGLAWWRELAPRLLPFLADEQAALLEAELAAQLAFLASAAW  182 (319)
T ss_pred             ecCCCCCCCCCHHHHHHHHHHHHHHHhhhhcCCccCCCCCChHHHHHHHHHHhhccChhHHHHHHHHHHHHHHhhhcccc
Confidence            999875421           1   11100000      001112 11111            11 111112233321   


Q ss_pred             -cCCCCeEecCCCCCcEEEcCCCcEEEEeecCccc
Q 048419          451 -ECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKI  484 (653)
Q Consensus       451 -~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~  484 (653)
                       ....++||+|+.|.||+++.+...-|+||+.+..
T Consensus       183 ~~lp~~liHgD~~~~Nil~~~~~~~~iIDf~~~~~  217 (319)
T PRK05231        183 PALPRGVIHADLFRDNVLFEGDRLSGFIDFYFACN  217 (319)
T ss_pred             ccCCcccCCCCCCCCcEEEECCceEEEEecccccC
Confidence             1356899999999999999766668999998763

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=97.19  E-value=0.0043  Score=64.23  Aligned_cols=145  Identities=13%  Similarity=0.082  Sum_probs=86.3

Q ss_pred             ceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCc--eeeeeeee------cccceeEEEE
Q 048419          335 QNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRN--LVQLHGWC------RKQDELLLVY  406 (653)
Q Consensus       335 ~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n--iv~l~g~~------~~~~~~~lV~  406 (653)
                      .+.|..|....+|+....  +..+++|+...   ........|++++..|.+..  +.+++...      ...+..++|+
T Consensus        19 i~~i~~G~~n~~y~v~~~--~~~~vLr~~~~---~~~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~~~l~   93 (296)
T cd05153          19 FEGISAGIENTNYFVTTD--SGRYVLTLFEK---VSAEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKPAALV   93 (296)
T ss_pred             eecccCccccceEEEEeC--CCcEEEEEcCC---CChHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCceEEEE
Confidence            456777777899998764  34688998754   22345667888888875433  44444321      2234568999


Q ss_pred             eccCCCCchh----hh----------hcccccc------cccchhhhHH----------HHHHHHHHHHHHHHh----cC
Q 048419          407 DYVPNGSLDK----LL----------FDKDHKL------RKLLTWDQRY----------KILIGIAQSLLYLHE----EC  452 (653)
Q Consensus       407 E~~~~gsL~~----~l----------~~~~~~~------~~~l~~~~~~----------~i~~~ia~~L~yLH~----~~  452 (653)
                      +|++|..+..    .+          +......      .....|....          .....+..++.++.+    ..
T Consensus        94 ~~i~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~  173 (296)
T cd05153          94 EFLAGEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADELARQDAFDPSDL  173 (296)
T ss_pred             EeCCCCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHHHHHHhhhhhcC
Confidence            9999877643    01          1000000      0111222211          011223344455543    23


Q ss_pred             CCCeEecCCCCCcEEEcCCCcEEEEeecCccc
Q 048419          453 NQRVVHRDVKPSNILLDTYLNAKLGDFGLAKI  484 (653)
Q Consensus       453 ~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~  484 (653)
                      ..+++|+|+.|.||+++++..+.|.||+.+..
T Consensus       174 ~~~l~HgD~~~~Nil~~~~~~~~iIDfe~a~~  205 (296)
T cd05153         174 PRGVIHADLFRDNVLFDGDELSGVIDFYFACT  205 (296)
T ss_pred             CCcCCccCcCcccEEEeCCceEEEeehhhhcC
Confidence            46799999999999999987788999998763

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=97.11  E-value=0.0087  Score=62.40  Aligned_cols=146  Identities=15%  Similarity=0.148  Sum_probs=83.4

Q ss_pred             ceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCc--eeeeeeee------cccceeEEEE
Q 048419          335 QNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRN--LVQLHGWC------RKQDELLLVY  406 (653)
Q Consensus       335 ~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n--iv~l~g~~------~~~~~~~lV~  406 (653)
                      .+.++.|....+|+.... ++ .+++|+.....  ..+....|++++..|....  +.+++...      ...+..++++
T Consensus        27 i~~~~~G~~n~~y~v~t~-~~-~~vLK~~~~~~--~~~~i~~e~~~l~~L~~~g~pvp~~i~t~~g~~~~~~~g~~~~l~  102 (307)
T TIGR00938        27 LKGIAEGVENSNYLLTTD-VG-RYILTLYEKRV--KAEELPFFLALTTHLAARGLPVPKPVKSRDGRQLSTLAGKPACLV  102 (307)
T ss_pred             ccccCCccccceEEEEeC-CC-cEEEEEecCCC--CHHHHHHHHHHHHHHHHCCCCCCccccCCCCCeehhcCCeEEEEE
Confidence            445677777899988753 33 58888874421  1234456677777774322  34444322      2235678999


Q ss_pred             eccCCCCchhh--------------hhccccccc-------ccchhhhHH------------HHHHHHHHHHHHHHh---
Q 048419          407 DYVPNGSLDKL--------------LFDKDHKLR-------KLLTWDQRY------------KILIGIAQSLLYLHE---  450 (653)
Q Consensus       407 E~~~~gsL~~~--------------l~~~~~~~~-------~~l~~~~~~------------~i~~~ia~~L~yLH~---  450 (653)
                      ||++|..+...              ++.......       ..-.|....            .....+.+.++++..   
T Consensus       103 e~i~G~~~~~~~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~l~~~~~  182 (307)
T TIGR00938       103 EFLQGLSVGRPTAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAWHILAEKCFEAAPQLEAHMGAELDKELDYLDKFWP  182 (307)
T ss_pred             EeCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHHHHHHHhhhhcccccCHHHHHHHHHHHHHHHhhhh
Confidence            99988654311              111110000       011122111            011223344555543   


Q ss_pred             -cCCCCeEecCCCCCcEEEcCCCcEEEEeecCccc
Q 048419          451 -ECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKI  484 (653)
Q Consensus       451 -~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~  484 (653)
                       ....+++|+|+.+.||+++.++...|+||+.+..
T Consensus       183 ~~~~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~~  217 (307)
T TIGR00938       183 RDLPRGVIHADLFPDNVLFDGDSVKGVIDFYFACT  217 (307)
T ss_pred             hcCCCccCCCCCCcCcEEEECCceEEEeecccccC
Confidence             3457899999999999999888778999998753

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2')

Probab=96.61  E-value=0.03  Score=57.32  Aligned_cols=31  Identities=35%  Similarity=0.520  Sum_probs=25.8

Q ss_pred             CCeEecCCCCCcEEEcCCCc-EEEEeecCccc
Q 048419          454 QRVVHRDVKPSNILLDTYLN-AKLGDFGLAKI  484 (653)
Q Consensus       454 ~~ivH~Dlkp~NIll~~~~~-~kl~DfGla~~  484 (653)
                      ..++|+|++|.|||++++++ .-|.||+.+..
T Consensus       185 ~~lvHGD~~~~Nilv~~~~~~~gviDWe~a~i  216 (276)
T cd05152         185 TVLVHGDLHPGHILIDEDARVTGLIDWTEAKV  216 (276)
T ss_pred             CeeEeCCCCCCcEEEeCCCCEEEEECcHhccc
Confidence            45899999999999987555 46999998764

MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported

>PLN02236 choline kinase

Probab=96.60  E-value=0.025  Score=59.89  Aligned_cols=144  Identities=17%  Similarity=0.238  Sum_probs=82.9

Q ss_pred             eeeeeeCcEEEEEEEeCC----CCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCcee-eeeeeecccceeEEEEeccC
Q 048419          336 NLVGSGGFGRVYRGLMPS----LGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLV-QLHGWCRKQDELLLVYDYVP  410 (653)
Q Consensus       336 ~~LG~G~fg~Vy~~~~~~----~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv-~l~g~~~~~~~~~lV~E~~~  410 (653)
                      +.|-.|-.-.+|+....+    .+..|++|.......... ...+|..+++.+...++. ++++.+.. +   .|+||++
T Consensus        42 ~~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t~~~i-dR~~E~~~~~~l~~~gl~P~~~~~~~~-g---~v~efi~  116 (344)
T PLN02236         42 IPLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGVELFF-DRDDEIRTFECMSRHGQGPRLLGRFPN-G---RVEEFIH  116 (344)
T ss_pred             EEcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCCCeee-chHHHHHHHHHHHHcCCCCceEEEECC-c---eEEEeeC
Confidence            445556777899987532    246799998865433222 236788888888654443 45555432 2   5899998


Q ss_pred             CCCchhh-----------------hhcccccc-cccchhhhHHHHHHHH-----------------HHHHHHHHh-----
Q 048419          411 NGSLDKL-----------------LFDKDHKL-RKLLTWDQRYKILIGI-----------------AQSLLYLHE-----  450 (653)
Q Consensus       411 ~gsL~~~-----------------l~~~~~~~-~~~l~~~~~~~i~~~i-----------------a~~L~yLH~-----  450 (653)
                      +.+|...                 +|+..... .....|.+..++..++                 ...+..|.+     
T Consensus       117 g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~L~~~~~~~  196 (344)
T PLN02236        117 ARTLSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKNLCSPEEAKEFRLDSLEDEINLLEKELSGD  196 (344)
T ss_pred             CCCCCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhhcCcchhhhcCHHHHHHHHHHHHHHhccc
Confidence            7776421                 11111000 1122233333332221                 112222221     


Q ss_pred             cCCCCeEecCCCCCcEEEcC-CCcEEEEeecCccc
Q 048419          451 ECNQRVVHRDVKPSNILLDT-YLNAKLGDFGLAKI  484 (653)
Q Consensus       451 ~~~~~ivH~Dlkp~NIll~~-~~~~kl~DfGla~~  484 (653)
                      .....++|+|+++.|||+++ ++.++++||..+..
T Consensus       197 ~~~~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~~  231 (344)
T PLN02236        197 DQEIGFCHNDLQYGNIMIDEETRAITIIDYEYASY  231 (344)
T ss_pred             CCCceEEeCCCCcCcEEEeCCCCcEEEEeehhccc
Confidence            12347899999999999976 46899999998864

>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]

Probab=96.54  E-value=0.0044  Score=66.58  Aligned_cols=163  Identities=21%  Similarity=0.302  Sum_probs=92.3

Q ss_pred             HHHHHHHHHHhhcCCCceeeeeeeeccc-ceeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHh
Q 048419          372 KEFVAEIMSMGRLRHRNLVQLHGWCRKQ-DELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHE  450 (653)
Q Consensus       372 ~~~~~E~~~l~~l~H~niv~l~g~~~~~-~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~  450 (653)
                      .+.+.....++.+.|+|+.+.+.+-... ....+|+|++ +.||++++..+.      +...          +++    .
T Consensus        27 ~~ilgr~~~lktl~~~~l~~yl~~~r~~~~r~IVV~e~~-~~Sled~~~~~~------l~~~----------s~~----~   85 (725)
T KOG1093|consen   27 IQILGRFQYLKSLQHDNLCQYLDFSRGKHERVIVVMEHY-TMSLEDILKTGN------LKDE----------SLL----A   85 (725)
T ss_pred             HHHhhhhHHHHhhcCccceeeEeeecCccceEEEEehhh-ccchHHHHHhcc------cchh----------hhc----c
Confidence            4556677889999999999988876544 3468899998 669998886543      1110          111    1


Q ss_pred             cCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHH
Q 048419          451 ECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVA  530 (653)
Q Consensus       451 ~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ell  530 (653)
                         +++.|-     ||+       +++| -++..                 |  |-.     ..+|+|||++|.++.|+.
T Consensus        86 ---~~~~~~-----~~~-------~~td-~~~t~-----------------~--~~~-----~~pKsdVwsl~~i~~el~  125 (725)
T KOG1093|consen   86 ---HGVLHL-----NII-------YITD-HFLTK-----------------Y--PSP-----IGPKSDVWSLGFIILELY  125 (725)
T ss_pred             ---ccccee-----hhh-------hccc-ccccc-----------------C--CCC-----CCcchhhhhHHHHHHHHH
Confidence               233332     222       2233 11100                 0  100     114999999999999999


Q ss_pred             hCCCCCChhhhhhHHHHHHHHHhhhcc-cchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHH
Q 048419          531 CGRRSIEPQKAAAELLLVDWVKELHLE-GEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRV  600 (653)
Q Consensus       531 tG~~p~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev  600 (653)
                      -|..-+......+..   ..+...... ..........  ....+..+.++++...|+-..|..||...++
T Consensus       126 L~~~l~~~~~~s~~l---~~i~k~~~~d~~~~~~a~e~--~~~~~~d~~~~~~~~~c~~~~~~ir~l~~~~  191 (725)
T KOG1093|consen  126 LGISLEAELTESEYL---EILLKYYTDDQELLSTAMEH--LIQLLADKKRLPLLKKCLWLEPIIRPLPMEL  191 (725)
T ss_pred             HhhHHHHHHHHHHHH---HHHHHhccCchhHHHHHHHH--HHHHhhhHhHHHHhccCCccccccccchhHH
Confidence            987655443332221   112222111 1111111111  2223445778899999999999998854443

>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]

Probab=96.45  E-value=0.041  Score=56.98  Aligned_cols=129  Identities=17%  Similarity=0.196  Sum_probs=79.8

Q ss_pred             EEEEEEeCCCCcEEEEEEec-cCchhhHHHHHHHHHHHhhcCC--Cceeeeeeeecccc--eeEEEEeccCCCCchhhhh
Q 048419          345 RVYRGLMPSLGLEVAIKRIG-HNSQQGMKEFVAEIMSMGRLRH--RNLVQLHGWCRKQD--ELLLVYDYVPNGSLDKLLF  419 (653)
Q Consensus       345 ~Vy~~~~~~~~~~vavK~~~-~~~~~~~~~~~~E~~~l~~l~H--~niv~l~g~~~~~~--~~~lV~E~~~~gsL~~~l~  419 (653)
                      .+|.....  ++.+++++-. ...........+|...|+.+.-  --+.+.+++|.++.  ..+.||+|++|..+.+.+.
T Consensus        40 ~t~~~~~~--~~~~vlR~P~~~~~~~~~~~~~re~~~i~~l~~~~vP~p~~~~~~~~~~~g~pf~v~~~veGe~~~~~~~  117 (321)
T COG3173          40 DTFRLGDT--GQKYVLRKPPRGDPVESAHDEKREYRVIAALLDVDVPVPRAFGLCGEGYLGTPFYVMEWVEGEVVWSALP  117 (321)
T ss_pred             ceEEEecC--CceEEEecCCccccchhhhHHHhHHHHHHHhcCCCCCCcccccccccCCCCCceEEEEEecceeccCcCC
Confidence            44444333  6778888221 1233345566678888887742  33555677887776  6799999998854444332


Q ss_pred             cccccccccchhhhHHHHH-HHHHHHHHHHH-------------------------------------------------
Q 048419          420 DKDHKLRKLLTWDQRYKIL-IGIAQSLLYLH-------------------------------------------------  449 (653)
Q Consensus       420 ~~~~~~~~~l~~~~~~~i~-~~ia~~L~yLH-------------------------------------------------  449 (653)
                      ....      .    .+.+ ..+++.|.-||                                                 
T Consensus       118 ~~~~------~----~~~~~~~l~~~La~LH~ida~~~~~~g~~~~~~~rql~~~~~~~~~~~~~~~~~~p~~~~~~~Wl  187 (321)
T COG3173         118 PESL------G----RQFALDALADFLAELHSIDAAGLPDPGKPNAYRGRQLARWDDEYRRAKKELGGRIPLADRLIKWL  187 (321)
T ss_pred             cccc------h----HHHHHHHHHHHHHHHhCCCCcCCCCCCccCccccchhhHHHHHHHHHHHhccCCCchHHHHHHHH
Confidence            2110      0    0111 23333333333                                                 


Q ss_pred             -hcC-----CCCeEecCCCCCcEEEcCCCcEEEEeecCcccc
Q 048419          450 -EEC-----NQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIY  485 (653)
Q Consensus       450 -~~~-----~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~  485 (653)
                       +..     ...++|+|+.+.|++++...-+=|.||+++..-
T Consensus       188 ~~~~p~~~~~~~lvHGD~~~gNlii~~~~~~gVlDwe~~~lG  229 (321)
T COG3173         188 EANRPPWAGPPVLVHGDYRPGNLIIDPGRPTGVLDWELATLG  229 (321)
T ss_pred             HhcCCCcCCCceeeeCCcccCCEEEeCCCeeEEEeccccccC
Confidence             321     256999999999999998888999999998763

>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]

Probab=96.28  E-value=0.0005  Score=81.64  Aligned_cols=163  Identities=15%  Similarity=0.000  Sum_probs=113.2

Q ss_pred             HHHHHHHHHhhcCCCceeeeeeeecc--cceeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHh
Q 048419          373 EFVAEIMSMGRLRHRNLVQLHGWCRK--QDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHE  450 (653)
Q Consensus       373 ~~~~E~~~l~~l~H~niv~l~g~~~~--~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~  450 (653)
                      ....|...+++..|+++.....=...  ..+.+.+++|+..|.+.+.|-....+ ...+........-.+......-+|.
T Consensus      1275 mll~e~de~~~~~h~~~~~~p~rI~ps~s~ee~~r~~~~~~g~~f~iIikg~ee-~~~ld~~~v~~~~kvsvl~~~~~ls 1353 (2724)
T KOG1826|consen 1275 MLLSERDELREAKHYLTEVDPLRIPPSESTEEYIRSLYVEFGKLFSIIIKGLEE-SPDLDRSPVHLRHKVSVLNRNVILS 1353 (2724)
T ss_pred             hhhhhhhhhhhhhceeeecccccCCCCCChHHHHHHHHHHHhHHHHHHHhcccc-CCcchhchHHHHHHHHHhccchhhh
Confidence            34445556666789888765543322  23568999999999999988765432 2223322222222232444444444


Q ss_pred             cC--CCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHH
Q 048419          451 EC--NQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLE  528 (653)
Q Consensus       451 ~~--~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~e  528 (653)
                      ..  ..-.+|++||+-|.+|..+.++|++++|+.+...+. ........+++.|+.|++...-+++.++|+|..|+-+|+
T Consensus      1354 ~tnlg~T~v~~~Lkf~lpmIVtny~v~~gk~gLdKIknp~-~sf~Gl~l~sp~~v~qli~N~ik~t~rsdilr~s~~ly~ 1432 (2724)
T KOG1826|consen 1354 LTNLGNTNVSKSLKFTLPMIVTNYNVKLGKGGLDKIKNPV-LSFFGLELCSPIYVLQLIKNEIKFTKRSDILRRSLSLYL 1432 (2724)
T ss_pred             cccCCccchhhhhhhhccceecCCcccccccccccccCch-HhhhhhhhCCHHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence            32  244789999999999999999999999999843322 223344567889999999998899999999999999999


Q ss_pred             HHhCCCCCC
Q 048419          529 VACGRRSIE  537 (653)
Q Consensus       529 lltG~~p~~  537 (653)
                      ..-|..++.
T Consensus      1433 rs~~n~~fi 1441 (2724)
T KOG1826|consen 1433 RSDGNAYFI 1441 (2724)
T ss_pred             HhcccHHHH
Confidence            988877654

>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]

Probab=96.14  E-value=0.016  Score=59.01  Aligned_cols=148  Identities=14%  Similarity=0.111  Sum_probs=95.9

Q ss_pred             ccCHHHHHHhhcC---cCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc--------hh----------h----HHH
Q 048419          319 RFKYAELASVTKG---FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS--------QQ----------G----MKE  373 (653)
Q Consensus       319 ~f~~~el~~at~~---f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~--------~~----------~----~~~  373 (653)
                      -+.|--|++..++   ++..+.||-|--+.+|.+.... |.+.++|.-+...        ..          +    .-.
T Consensus        78 GyDyLAlktL~~R~~v~svGnqIGVGKESDIY~v~d~~-G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRla  156 (465)
T KOG2268|consen   78 GYDYLALKTLSNRGSVESVGNQIGVGKESDIYVVADEE-GNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLA  156 (465)
T ss_pred             cchHHHHHHHHhcchhhhhccccccccccceEEEecCC-CCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHH
Confidence            3556666666654   4667899999999999998864 7888888642210        00          0    112


Q ss_pred             HHHHHHHHhhcCC-Cc-eeeeeeeecccceeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhc
Q 048419          374 FVAEIMSMGRLRH-RN-LVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEE  451 (653)
Q Consensus       374 ~~~E~~~l~~l~H-~n-iv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~  451 (653)
                      ...|...|+.|.. .. +.+.+    +.+.-++|||++.+-.|...-+-.        +.+   .+...+..-+.-|-. 
T Consensus       157 a~kEfafmkaL~e~gfpVPkpi----D~~RH~Vvmelv~g~Pl~~v~~v~--------d~~---~ly~~lm~~Iv~la~-  220 (465)
T KOG2268|consen  157 ATKEFAFMKALYERGFPVPKPI----DHNRHCVVMELVDGYPLRQVRHVE--------DPP---TLYDDLMGLIVRLAN-  220 (465)
T ss_pred             HHHHHHHHHHHHHcCCCCCCcc----cccceeeHHHhhcccceeeeeecC--------ChH---HHHHHHHHHHHHHHH-
Confidence            3457777777743 21 22222    334568999999887775543221        122   233333333444444 


Q ss_pred             CCCCeEecCCCCCcEEEcCCCcEEEEeecCcccc
Q 048419          452 CNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIY  485 (653)
Q Consensus       452 ~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~  485 (653)
                        +|+||+|..-=||+++++..++++||--....
T Consensus       221 --~GlIHgDFNEFNimv~dd~~i~vIDFPQmvS~  252 (465)
T KOG2268|consen  221 --HGLIHGDFNEFNIMVKDDDKIVVIDFPQMVST  252 (465)
T ss_pred             --cCceecccchheeEEecCCCEEEeechHhhcc
Confidence              89999999999999999999999999655443

>PLN02421 phosphotransferase, alcohol group as acceptor/kinase

Probab=96.07  E-value=0.054  Score=57.05  Aligned_cols=144  Identities=14%  Similarity=0.208  Sum_probs=80.2

Q ss_pred             eeeeeeCcEEEEEEEeCCC---CcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCcee-eeeeeecccceeEEEEeccCC
Q 048419          336 NLVGSGGFGRVYRGLMPSL---GLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLV-QLHGWCRKQDELLLVYDYVPN  411 (653)
Q Consensus       336 ~~LG~G~fg~Vy~~~~~~~---~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv-~l~g~~~~~~~~~lV~E~~~~  411 (653)
                      +.|..|-.-.+|+....+.   +..|++|+....... .-...+|..+++.+..-++. ++++++ ..+   +|.+|+++
T Consensus        20 ~~l~gGlTN~~~~v~~~~~~~~~~~~v~Ri~g~~t~~-~IdR~~E~~il~~l~~~gl~P~~l~~~-~~G---~i~~fi~g   94 (330)
T PLN02421         20 ERISGGITNLLLKVSVKEENGNEVSVTVRLFGPNTDY-VIDRERELQAIKYLSAAGFGAKLLGVF-GNG---MIQSFINA   94 (330)
T ss_pred             EEeCCcccceEEEEEecCCCCCCceEEEEEecCCcCe-EechHHHHHHHHHHHhcCCCCceeEEe-CCc---EeehhhcC
Confidence            4455566678898875432   237889987554322 12235788888888655553 455555 222   58999977


Q ss_pred             CCchhh-----------------hhcccccc-cccchhhhHHHHHHHH----------------------HHHHHHHHhc
Q 048419          412 GSLDKL-----------------LFDKDHKL-RKLLTWDQRYKILIGI----------------------AQSLLYLHEE  451 (653)
Q Consensus       412 gsL~~~-----------------l~~~~~~~-~~~l~~~~~~~i~~~i----------------------a~~L~yLH~~  451 (653)
                      ..|..-                 +|...... ..+-.|..+.++..++                      .+-+..+...
T Consensus        95 ~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~  174 (330)
T PLN02421         95 RTLTPSDMRKPKVAAEIAKELRRLHQVEIPGSKEPQLWNDIFKFYEKASTVKFEDPEKQKKYETISFEELRDEIVELKEI  174 (330)
T ss_pred             CCCChHHCCCHHHHHHHHHHHHHHhCCCCCCCCCCcHHHHHHHHHHHhhhcccCcHHHhhhhcccCHHHHHHHHHHHHHH
Confidence            665321                 11111000 1111233332222221                      1112222211


Q ss_pred             -----CCCCeEecCCCCCcEEEcC-CCcEEEEeecCccc
Q 048419          452 -----CNQRVVHRDVKPSNILLDT-YLNAKLGDFGLAKI  484 (653)
Q Consensus       452 -----~~~~ivH~Dlkp~NIll~~-~~~~kl~DfGla~~  484 (653)
                           .+.-.+|+|+.+.|||+++ ++.++++||..|..
T Consensus       175 ~~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lID~EYag~  213 (330)
T PLN02421        175 TDSLKAPVVFAHNDLLSGNLMLNEDEGKLYFIDFEYGSY  213 (330)
T ss_pred             hccCCCCeEEEECCCCcccEEEeCCCCcEEEEcccccCC
Confidence                 1234799999999999975 57899999998864

>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []

Probab=95.95  E-value=0.076  Score=54.57  Aligned_cols=73  Identities=19%  Similarity=0.303  Sum_probs=48.0

Q ss_pred             ceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcC---CCceeeeeeeecccceeEEEEeccCC
Q 048419          335 QNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLR---HRNLVQLHGWCRKQDELLLVYDYVPN  411 (653)
Q Consensus       335 ~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---H~niv~l~g~~~~~~~~~lV~E~~~~  411 (653)
                      .+.|+.|....+|+..  .++..+.||.-.   ......|..|.+-|+.|.   --.+.+++++....+..+||+||++.
T Consensus        22 ~~~v~GG~i~~a~~~~--~~~~~~FvK~~~---~~~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~~fLlle~l~~   96 (288)
T PF03881_consen   22 IEPVSGGDINEAYRLD--TDGGSYFVKVNS---ESGRDMFEGEAEGLKALAEANPIRVPKVIAWGEYDDDAFLLLEFLEM   96 (288)
T ss_dssp             EEEE--SSSSEEEEEE--TTS-EEEEEEEE---GGGCCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSCCEEEEE----
T ss_pred             eEecCCCChhheEEEE--CCCccEEEEecC---hhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCCceEEEEeecC
Confidence            5678989999999977  457889999875   233456788888888883   44577888888777777999999977


Q ss_pred             C
Q 048419          412 G  412 (653)
Q Consensus       412 g  412 (653)
                      +
T Consensus        97 ~   97 (288)
T PF03881_consen   97 G   97 (288)
T ss_dssp             -
T ss_pred             C
Confidence            6

Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.

>TIGR02904 spore_ysxE spore coat protein YsxE

Probab=95.86  E-value=0.099  Score=54.51  Aligned_cols=33  Identities=21%  Similarity=0.230  Sum_probs=29.3

Q ss_pred             CCCCeEecCCCCCcEEEcCCCcEEEEeecCccc
Q 048419          452 CNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKI  484 (653)
Q Consensus       452 ~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~  484 (653)
                      ...+++|+|+.++||++++++.+.++||..+..
T Consensus       194 ~~~~lcHgD~~~~Nvl~~~~~~~~iIDfd~~~~  226 (309)
T TIGR02904       194 WRTVLVHGKLSLSHFLYDETRGGYFINFEKASF  226 (309)
T ss_pred             cceeeeCCCCcHHhEEEcCCCCEEEEEhhhccc
Confidence            346899999999999999999999999988764

Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.

>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2

Probab=95.85  E-value=0.022  Score=55.83  Aligned_cols=31  Identities=35%  Similarity=0.463  Sum_probs=22.3

Q ss_pred             CCeEecCCCCCcEEE-cCCCcEEEEeecCccc
Q 048419          454 QRVVHRDVKPSNILL-DTYLNAKLGDFGLAKI  484 (653)
Q Consensus       454 ~~ivH~Dlkp~NIll-~~~~~~kl~DfGla~~  484 (653)
                      ..++|+|+.+.|||+ +.++.++++||..+..
T Consensus       143 ~v~cHnDl~~~Nil~~~~~~~~~lIDfEya~~  174 (211)
T PF01633_consen  143 LVFCHNDLNPGNILINNKDGEVKLIDFEYAGY  174 (211)
T ss_dssp             EEEE-S--SGGGEEETSSSSCEEE--GTT-EE
T ss_pred             ceEeeccCccccEEeccCCCeEEEecHHHHhh
Confidence            468999999999999 8899999999998864

7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....

>TIGR01767 MTRK 5-methylthioribose kinase

Probab=95.61  E-value=0.099  Score=55.04  Aligned_cols=74  Identities=11%  Similarity=0.040  Sum_probs=47.0

Q ss_pred             eeeeeCcEEEEEEEeCCCCcEEEEEEeccC-------chhhHHHHHHHHHHHhhcC--CCc-eeeeeeeecccceeEEEE
Q 048419          337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHN-------SQQGMKEFVAEIMSMGRLR--HRN-LVQLHGWCRKQDELLLVY  406 (653)
Q Consensus       337 ~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~-------~~~~~~~~~~E~~~l~~l~--H~n-iv~l~g~~~~~~~~~lV~  406 (653)
                      .||.|....||++..++.+..|+||.-...       -+-..++..-|.+.|+...  .|. +.+++.  .+++...+||
T Consensus         2 EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy~--~D~e~~~~vM   79 (370)
T TIGR01767         2 EVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIFH--FDTEMAVTVM   79 (370)
T ss_pred             cCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEEE--EccccceehH
Confidence            479999999999998654468999974311       1223445556777776653  343 344433  3444457999


Q ss_pred             eccCCC
Q 048419          407 DYVPNG  412 (653)
Q Consensus       407 E~~~~g  412 (653)
                      |+++..
T Consensus        80 EdL~~~   85 (370)
T TIGR01767        80 EDLSHH   85 (370)
T ss_pred             hhCccc
Confidence            998653

This enzyme is involved in the methionine salvage pathway in certain bacteria.

>TIGR02906 spore_CotS spore coat protein, CotS family

Probab=95.60  E-value=0.1  Score=54.37  Aligned_cols=30  Identities=27%  Similarity=0.303  Sum_probs=26.2

Q ss_pred             CCCeEecCCCCCcEEEcCCCcEEEEeecCcc
Q 048419          453 NQRVVHRDVKPSNILLDTYLNAKLGDFGLAK  483 (653)
Q Consensus       453 ~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~  483 (653)
                      ..+++|+|+.+.||+++. +.+.|+||+.+.
T Consensus       186 ~~~liHgD~~~~Nil~~~-~~i~lIDfd~~~  215 (313)
T TIGR02906       186 IRGFCHQDYAYHNILLKD-NEVYVIDFDYCT  215 (313)
T ss_pred             cCceEcCCCCcccEEEeC-CcEEEEECcccc
Confidence            368999999999999987 678999999765

Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	653
3tl8_A	349	The Avrptob-Bak1 Complex Reveals Two Structurally S		1e-50
3uim_A	326	Structural Basis For The Impact Of Phosphorylation		6e-50
2qkw_B	321	Structural Basis For Activation Of Plant Immunity B		5e-37
3hgk_A	327	Crystal Structure Of Effect Protein Avrptob Complex		1e-36
2nry_A	307	Crystal Structure Of Irak-4 Length = 307		2e-35
2nru_A	307	Crystal Structure Of Irak-4 Length = 307		4e-35
2oib_A	301	Crystal Structure Of Irak4 Kinase Domain Apo Form L		4e-35
2o8y_A	298	Apo Irak4 Kinase Domain Length = 298		4e-33
3dtc_A	271	Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp		3e-20
1mqb_A	333	Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro		9e-20
4eqm_A	294	Structural Analysis Of Staphylococcus Aureus Serine		2e-19
2pk9_A	317	Structure Of The Pho85-pho80 Cdk-cyclin Complex Of		9e-19
2vwu_A	302	Ephb4 Kinase Domain Inhibitor Complex Length = 302		1e-18
4aw5_A	291	Complex Of The Ephb4 Kinase Domain With An Oxindole		3e-18
2r2p_A	295	Kinase Domain Of Human Ephrin Type-A Receptor 5 (Ep		5e-18
3ppz_A	309	Crystal Structure Of Ctr1 Kinase Domain In Complex		8e-18
2qok_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		8e-18
2qoc_A	344	Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp		1e-17
2qoo_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		2e-17
3dzq_A	361	Human Epha3 Kinase Domain In Complex With Inhibitor		2e-17
1jpa_A	312	Crystal Structure Of Unphosphorylated Ephb2 Recepto		2e-17
2qoi_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		2e-17
2qof_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f		2e-17
2qod_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y602f		2e-17
3p86_A	309	Crystal Structure Of Ctr1 Kinase Domain Mutant D676		2e-17
3fxx_A	371	Human Epha3 Kinase And Juxtamembrane Region Bound T		2e-17
2gsf_A	373	The Human Epha3 Receptor Tyrosine Kinase And Juxtam		2e-17
2qol_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596:y		3e-17
2rei_A	318	Kinase Domain Of Human Ephrin Type-a Receptor 7 (ep		4e-17
2qon_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		1e-16
2qob_A	344	Human Epha3 Kinase Domain, Base Structure Length =		1e-16
2hel_A	306	Crystal Structure Of A Mutant Epha4 Kinase Domain (		1e-16
3mn3_A	271	An Inhibited Conformation For The Protein Kinase Do		1e-16
3dae_A	283	Crystal Structure Of Phosphorylated Snf1 Kinase Dom		1e-16
3hyh_A	275	Crystal Structure Of The Protein Kinase Domain Of Y		1e-16
2fh9_A	274	Structure And Dimerization Of The Kinase Domain Fro		1e-16
2qo7_A	373	Human Epha3 Kinase And Juxtamembrane Region, Dephos		2e-16
2hen_A	286	Crystal Structure Of The Ephb2 Receptor Kinase Doma		2e-16
1zy4_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		2e-16
2xyu_A	285	Crystal Structure Of Epha4 Kinase Domain In Complex		2e-16
2y6m_A	291	Crystal Structure Of Epha4 Kinase Domain Length = 2		2e-16
3vw6_A	269	Crystal Structure Of Human Apoptosis Signal-Regulat		4e-16
2clq_A	295	Structure Of Mitogen-Activated Protein Kinase Kinas		4e-16
3qa8_A	676	Crystal Structure Of Inhibitor Of Kappa B Kinase Be		5e-16
3rzf_A	677	Crystal Structure Of Inhibitor Of Kappab Kinase Bet		5e-16
3com_A	314	Crystal Structure Of Mst1 Kinase Length = 314		9e-16
3rvg_A	303	Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido		1e-15
4hge_A	300	Jak2 Kinase (Jh1 Domain) In Complex With Compound 8		1e-15
3e62_A	293	Fragment Based Discovery Of Jak-2 Inhibitors Length		1e-15
2w1i_A	326	Structure Determination Of Aurora Kinase In Complex		1e-15
3zgw_A	347	Crystal Structure Of Maternal Embryonic Leucine Zip		1e-15
3q32_A	301	Structure Of Janus Kinase 2 With A Pyrrolotriazine		1e-15
4aqc_A	301	Triazolopyridine-Based Inhibitor Of Janus Kinase 2		1e-15
2b7a_A	293	The Structural Basis Of Janus Kinase 2 Inhibition B		1e-15
3tjc_A	298	Co-Crystal Structure Of Jak2 With Thienopyridine 8		1e-15
3lpb_A	295	Crystal Structure Of Jak2 Complexed With A Potent 2		1e-15
4e4m_A	302	Jak2 Kinase (Jh1 Domain) In Complex With Compound 3		1e-15
1zyc_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		1e-15
3jy9_A	311	Janus Kinase 2 Inhibitors Length = 311		2e-15
3io7_A	313	2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel		2e-15
4e6d_A	298	Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W		3e-15
3usu_B	242	Crystal Structure Of Butea Monosperma Seed Lectin L		4e-15
3ugc_A	295	Structural Basis Of Jak2 Inhibition By The Type Ii		4e-15
3usu_A	256	Crystal Structure Of Butea Monosperma Seed Lectin L		5e-15
4gs6_A	315	Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz		5e-15
2eva_A	307	Structural Basis For The Interaction Of Tak1 Kinase		5e-15
3cok_A	278	Crystal Structure Of Plk4 Kinase Length = 278		5e-15
2xru_A	280	Aurora-A T288e Complexed With Pha-828300 Length = 2		6e-15
2wtw_A	285	Aurora-A Inhibitor Structure (2nd Crystal Form) Len		7e-15
3lau_A	287	Crystal Structure Of Aurora2 Kinase In Complex With		8e-15
2c6d_A	275	Aurora A Kinase Activated Mutant (T287d) In Complex		8e-15
3fdn_A	279	Structure-Based Drug Design Of Novel Aurora Kinase		9e-15
3omv_A	307	Crystal Structure Of C-Raf (Raf-1) Length = 307		9e-15
3e5a_A	268	Crystal Structure Of Aurora A In Complex With Vx-68		9e-15
2wqe_A	262	Structure Of S155r Aurora-A Somatic Mutant Length =		1e-14
2c6e_A	283	Aurora A Kinase Activated Mutant (T287d) In Complex		1e-14
2xng_A	283	Structure Of Aurora-A Bound To A Selective Imidazop		1e-14
4bbe_A	298	Aminoalkylpyrimidine Inhibitor Complexes With Jak2		1e-14
2j50_A	280	Structure Of Aurora-2 In Complex With Pha-739358 Le		1e-14
2j4z_A	306	Structure Of Aurora-2 In Complex With Pha-680626 Le		1e-14
2w1d_A	275	Structure Determination Of Aurora Kinase In Complex		1e-14
1mq4_A	272	Crystal Structure Of Aurora-A Protein Kinase Length		1e-14
1muo_A	297	Crystal Structure Of Aurora-2, An Oncogenic Serine-		1e-14
3o50_A	267	Crystal Structure Of Benzamide 9 Bound To Auroraa L		1e-14
3qgw_A	286	Crystal Structure Of Itk Kinase Bound To An Inhibit		1e-14
2x6d_A	285	Aurora-A Bound To An Inhibitor Length = 285		1e-14
2xa4_A	298	Inhibitors Of Jak2 Kinase Domain Length = 298		1e-14
1gii_A	298	Human Cyclin Dependent Kinase 2 Complexed With The		2e-14
1sm2_A	264	Crystal Structure Of The Phosphorylated Interleukin		2e-14
3v5j_A	266	Crystal Structure Of Interleukin-2 Inducible T-Cell		2e-14
2ofu_A	273	X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam		2e-14
3uiu_A	306	Crystal Structure Of Apo-Pkr Kinase Domain Length =		2e-14
3kmm_A	288	Structure Of Human Lck Kinase With A Small Molecule		2e-14
3lck_A	271	The Kinase Domain Of Human Lymphocyte Kinase (Lck),		2e-14
4hct_A	269	Crystal Structure Of Itk In Complex With Compound 5		2e-14
3bym_A	272	X-Ray Co-Crystal Structure Aminobenzimidazole Triaz		2e-14
1bi8_A	326	Mechanism Of G1 Cyclin Dependent Kinase Inhibition		2e-14
1qpe_A	279	Structural Analysis Of The Lymphocyte-Specific Kina		2e-14
3qbn_A	281	Structure Of Human Aurora A In Complex With A Diami		2e-14
1gz8_A	299	Human Cyclin Dependent Kinase 2 Complexed With The		2e-14
2of2_A	271	Crystal Structure Of Furanopyrimidine 8 Bound To Lc		2e-14
1jow_B	308	Crystal Structure Of A Complex Of Human Cdk6 And A		2e-14
2og8_A	265	Crystal Structure Of Aminoquinazoline 36 Bound To L		2e-14
4erw_A	306	Cdk2 In Complex With Staurosporine Length = 306		2e-14
2ofv_A	277	Crystal Structure Of Aminoquinazoline 1 Bound To Lc		2e-14
3ezr_A	300	Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ		2e-14
1pf8_A	298	Crystal Structure Of Human Cyclin-dependent Kinase		2e-14
3pj8_A	299	Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]		2e-14
3pxf_A	306	Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N		2e-14
3nup_A	307	Cdk6 (Monomeric) In Complex With Inhibitor Length =		2e-14
2zm1_A	285	Crystal Structure Of Imidazo Pyrazin 1 Bound To The		2e-14
2dwb_A	285	Aurora-A Kinase Complexed With Amppnp Length = 285		2e-14
2w17_A	299	Cdk2 In Complex With The Imidazole Pyrimidine Amide		2e-14
1fin_A	298	Cyclin A-Cyclin-Dependent Kinase 2 Complex Length =		2e-14
3kxz_A	287	The Complex Crystal Structure Of Lck With A Probe M		2e-14
3bys_A	277	Co-Crystal Structure Of Lck And Aminopyrimidine Ami		3e-14
1zxe_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		3e-14
3kul_B	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		3e-14
2wtv_A	285	Aurora-A Inhibitor Structure Length = 285		3e-14
1vyw_A	309	Structure Of Cdk2CYCLIN A WITH PNU-292137 Length =		3e-14
2pl0_A	289	Lck Bound To Imatinib Length = 289		3e-14
3ha6_A	268	Crystal Structure Of Aurora A In Complex With Tpx2		4e-14
1ol5_A	282	Structure Of Aurora-A 122-403, Phosphorylated On Th		4e-14
3h0y_A	268	Aurora A In Complex With A Bisanilinopyrimidine Len		4e-14
3r21_A	271	Design, Synthesis, And Biological Evaluation Of Pyr		4e-14
2w1c_A	275	Structure Determination Of Aurora Kinase In Complex		4e-14
2bmc_A	306	Aurora-2 T287d T288d Complexed With Pha-680632 Leng		4e-14
3kul_A	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		4e-14
3nrm_A	283	Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito		4e-14
1ol6_A	282	Structure Of Unphosphorylated D274n Mutant Of Auror		4e-14
2xne_A	272	Structure Of Aurora-A Bound To An Imidazopyrazine I		4e-14
3unz_A	279	Aurora A In Complex With Rpm1679 Length = 279		5e-14
4asz_A	299	Crystal Structure Of Apo Trkb Kinase Domain Length		5e-14
1oit_A	299	Imidazopyridines: A Potent And Selective Class Of C		5e-14
4dbn_A	284	Crystal Structure Of The Kinase Domain Of Human B-R		6e-14
3sxr_A	268	Crystal Structure Of Bmx Non-Receptor Tyrosine Kina		6e-14
2w5a_A	279	Human Nek2 Kinase Adp-Bound Length = 279		6e-14
2iw8_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82		6e-14
2fb8_A	281	Structure Of The B-Raf Kinase Domain Bound To Sb-59		6e-14
4h58_A	275	Braf In Complex With Compound 3 Length = 275		6e-14
3q96_A	282	B-Raf Kinase Domain In Complex With A Tetrahydronap		6e-14
3ipv_A	251	Crystal Structure Of Spatholobus Parviflorus Seed L		7e-14
3coh_A	268	Crystal Structure Of Aurora-A In Complex With A Pen		7e-14
3t9t_A	267	Crystal Structure Of Btk Mutant (F435t,K596r) Compl		7e-14
3ii5_A	306	The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi		7e-14
3d4q_A	307	Pyrazole-Based Inhibitors Of B-Raf Kinase Length =		8e-14
3d14_A	272	Crystal Structure Of Mouse Aurora A (Asn186->gly, L		8e-14
1e9h_A	297	Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex		9e-14
2jgz_A	289	Crystal Structure Of Phospho-Cdk2 In Complex With C		9e-14
4i3z_A	296	Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES		9e-14
1qmz_A	299	Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com		9e-14
3mpm_A	267	Lck Complexed With A Pyrazolopyrimidine Length = 26		9e-14
1jst_A	298	Phosphorylated Cyclin-Dependent Kinase-2 Bound To C		9e-14
3bht_A	300	Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN		9e-14
1w98_A	298	The Structural Basis Of Cdk2 Activation By Cyclin E		1e-13
1oir_A	299	Imidazopyridines: A Potent And Selective Class Of C		1e-13
1h01_A	298	Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili		1e-13
4eoo_A	299	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		1e-13
4eoi_A	299	Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc		1e-13
4eoq_A	301	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		1e-13
4bcq_A	301	Structure Of Cdk2 In Complex With Cyclin A And A 2-		1e-13
4eop_A	300	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		1e-13
4eon_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		1e-13
2iw6_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com		1e-13
1h1p_A	303	Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP		1e-13
4eom_A	301	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		1e-13
3qhr_A	298	Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic		1e-13
4eos_A	300	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		1e-13
1ogu_A	302	Structure Of Human Thr160-phospho Cdk2/cyclin A Com		1e-13
2f57_A	317	Crystal Structure Of The Human P21-activated Kinase		1e-13
2h6d_A	276	Protein Kinase Domain Of The Human 5'-Amp-Activated		1e-13
4eok_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		1e-13
4a4x_A	279	Nek2-Ede Bound To Cct248662 Length = 279		1e-13
4eoj_A	302	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		1e-13
3ipv_B	239	Crystal Structure Of Spatholobus Parviflorus Seed L		1e-13
2y94_A	476	Structure Of An Active Form Of Mammalian Ampk Lengt		2e-13
1qpd_A	279	Structural Analysis Of The Lymphocyte-specific Kina		2e-13
2jav_A	279	Human Kinase With Pyrrole-Indolinone Ligand Length		2e-13
1uwj_A	276	The Complex Of Mutant V599e B-raf And Bay439006 Len		2e-13
3miy_A	266	X-Ray Crystal Structure Of Itk Complexed With Sunit		2e-13
3idp_A	300	B-Raf V600e Kinase Domain In Complex With An Aminoi		2e-13
2w99_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		3e-13
1uwh_A	276	The Complex Of Wild Type B-Raf And Bay439006 Length		3e-13
3dk6_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		3e-13
2w96_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		3e-13
4g9r_A	307	B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr		3e-13
4f0f_A	287	Crystal Structure Of The Roco4 Kinase Domain Bound		3e-13
3daj_A	272	Crystal Structure Of Aurora A Complexed With An Inh		4e-13
3a4o_X	286	Lyn Kinase Domain Length = 286		4e-13
2w9f_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		4e-13
2yza_A	276	Crystal Structure Of Kinase Domain Of Human 5'-Amp-		5e-13
3d7u_A	263	Structural Basis For The Recognition Of C-Src By It		5e-13
1byg_A	278	Kinase Domain Of Human C-Terminal Src Kinase (Csk)		6e-13
2a19_B	284	Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Leng		6e-13
4gt4_A	308	Structure Of Unliganded, Inactive Ror2 Kinase Domai		6e-13
3p08_A	267	Crystal Structure Of The Human Btk Kinase Domain Le		6e-13
1k2p_A	263	Crystal Structure Of Bruton's Tyrosine Kinase Domai		7e-13
3sd0_A	350	Identification Of A Glycogen Synthase Kinase-3b Inh		7e-13
3k54_A	283	Structures Of Human Bruton's Tyrosine Kinase In Act		7e-13
1k9a_A	450	Crystal Structure Analysis Of Full-Length Carboxyl-		7e-13
3dk7_A	277	Crystal Structure Of Mutant Abl Kinase Domain In Co		7e-13
1uv5_A	350	Glycogen Synthase Kinase 3 Beta Complexed With 6-Br		7e-13
1h8f_A	352	Glycogen Synthase Kinase 3 Beta. Length = 352		7e-13
3orn_A	307	Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In		8e-13
2o5k_A	372	Crystal Structure Of Gsk3beta In Complex With A Ben		8e-13
2gcd_A	309	Tao2 Kinase Domain-Staurosporine Structure Length =		8e-13
3ocs_A	271	Crystal Structure Of Bruton's Tyrosine Kinase In Co		8e-13
1yi6_A	276	C-Term Tail Segment Of Human Tyrosine Kinase (258-5		8e-13
3zzw_A	289	Crystal Structure Of The Kinase Domain Of Ror2 Leng		9e-13
2v7a_A	286	Crystal Structure Of The T315i Abl Mutant In Comple		9e-13
2gqg_A	278	X-Ray Crystal Structure Of Dasatinib (Bms-354825) B		9e-13
3dak_A	290	Crystal Structure Of Domain-Swapped Osr1 Kinase Dom		9e-13
3c4c_A	280	B-Raf Kinase In Complex With Plx4720 Length = 280		9e-13
2oo8_X	317	Synthesis, Structural Analysis, And Sar Studies Of		9e-13
3gvu_A	292	The Crystal Structure Of Human Abl2 In Complex With		9e-13
3oy3_A	284	Crystal Structure Of Abl T315i Mutant Kinase Domain		9e-13
1fvr_A	327	Tie2 Kinase Domain Length = 327		9e-13
2f4j_A	287	Structure Of The Kinase Domain Of An Imatinib-Resis		9e-13
1r0e_A	391	Glycogen Synthase Kinase-3 Beta In Complex With 3-I		9e-13
3pix_A	274	Crystal Structure Of Btk Kinase Domain Complexed Wi		9e-13
2wqm_A	310	Structure Of Apo Human Nek7 Length = 310		9e-13
2bva_A	292	Crystal Structure Of The Human P21-Activated Kinase		1e-12
1q5k_A	414	Crystal Structure Of Glycogen Synthase Kinase 3 In		1e-12
2hz0_A	270	Abl Kinase Domain In Complex With Nvp-Aeg082 Length		1e-12
1yhv_A	297	Crystal Structure Of Pak1 Kinase Domain With Two Po		1e-12
1u5q_A	348	Crystal Structure Of The Tao2 Kinase Domain: Activa		1e-12
2vwi_A	303	Structure Of The Osr1 Kinase, A Hypertension Drug T		1e-12
3gen_A	283	The 1.6 A Crystal Structure Of Human Bruton's Tyros		1e-12
1fpu_A	293	Crystal Structure Of Abl Kinase Domain In Complex W		1e-12
3qrj_A	277	The Crystal Structure Of Human Abl1 Kinase Domain T		1e-12
3oxz_A	284	Crystal Structure Of Abl Kinase Domain Bound With A		1e-12
2z60_A	288	Crystal Structure Of The T315i Mutant Of Abl Kinase		1e-12
2hyy_A	273	Human Abl Kinase Domain In Complex With Imatinib (S		1e-12
2g2f_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		1e-12
3dqw_A	286	C-Src Kinase Domain Thr338ile Mutant In Complex Wit		1e-12
3qri_A	277	The Crystal Structure Of Human Abl1 Kinase Domain I		1e-12
2qoh_A	288	Crystal Structure Of Abl Kinase Bound With Ppy-a Le		1e-12
2q0n_A	301	Structure Of Human P21 Activating Kinase 4 (Pak4) I		1e-12
1f3m_C	297	Crystal Structure Of Human SerineTHREONINE KINASE P		1e-12
3pyy_A	298	Discovery And Characterization Of A Cell-Permeable,		1e-12
2x4z_A	296	Crystal Structure Of The Human P21-Activated Kinase		1e-12
2hzi_A	277	Abl Kinase Domain In Complex With Pd180970 Length =		1e-12
1i09_A	420	Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Len		1e-12
2e2b_A	293	Crystal Structure Of The C-Abl Kinase Domain In Com		1e-12
2hiw_A	287	Crystal Structure Of Inactive Conformation Abl Kina		1e-12
3v5q_A	297	Discovery Of A Selective Trk Inhibitor With Efficac		1e-12
2bdf_A	279	Src Kinase In Complex With Inhibitor Ap23451 Length		1e-12
1pyx_A	422	Gsk-3 Beta Complexed With Amp-Pnp Length = 422		1e-12
2cdz_A	303	Crystal Structure Of The Human P21-Activated Kinase		1e-12
3u4w_A	275	Src In Complex With Dna-Templated Macrocyclic Inhib		1e-12
2g1t_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		1e-12
4aaa_A	331	Crystal Structure Of The Human Cdkl2 Kinase Domain		1e-12
1fmk_A	452	Crystal Structure Of Human Tyrosine-Protein Kinase		1e-12
3d7u_B	277	Structural Basis For The Recognition Of C-Src By It		1e-12
1y57_A	452	Structure Of Unphosphorylated C-Src In Complex With		1e-12
1q3d_A	424	Gsk-3 Beta Complexed With Staurosporine Length = 42		1e-12
3q52_A	306	Structure Of Phosphorylated Pak1 Kinase Domain Leng		1e-12
3g6h_A	286	Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma		1e-12
3zdi_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		1e-12
3dk3_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		2e-12
4f1o_A	287	Crystal Structure Of The L1180t Mutant Roco4 Kinase		2e-12
3bbt_B	328	Crystal Structure Of The Erbb4 Kinase In Complex Wi		2e-12
3fxz_A	297	Crystal Structure Of Pak1 Kinase Domain With Ruthen		2e-12
2qkr_A	313	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		2e-12
3niz_A	311	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		2e-12
4acc_A	465	Gsk3b In Complex With Inhibitor Length = 465		2e-12
3f7z_A	350	X-ray Co-crystal Structure Of Glycogen Synthase Kin		2e-12
3d7t_A	269	Structural Basis For The Recognition Of C-Src By It		2e-12
2oiq_A	286	Crystal Structure Of Chicken C-Src Kinase Domain In		2e-12
4f1m_A	287	Crystal Structure Of The G1179s Roco4 Kinase Domain		2e-12
2ow3_A	352	Glycogen Synthase Kinase-3 Beta In Complex With Bis		2e-12
3svv_A	286	Crystal Structure Of T338c C-Src Covalently Bound T		2e-12
1gng_A	378	Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With		2e-12
4afj_A	367	5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selec		2e-12
2zv7_A	279	Lyn Tyrosine Kinase Domain, Apo Form Length = 279		2e-12
4dit_A	382	Crystal Structure Of Gsk3beta In Complex With A Imi		2e-12
3zrk_A	371	Identification Of 2-(4-Pyridyl)thienopyridinones As		2e-12
2r4b_A	321	Erbb4 Kinase Domain Complexed With A Thienopyrimidi		2e-12
3gb2_A	353	Gsk3beta Inhibitor Complex Length = 353		2e-12
3is5_A	285	Crystal Structure Of Cdpk Kinase Domain From Toxopl		2e-12
2hk5_A	270	Hck Kinase In Complex With Lck Targetted Inhibitor		2e-12
1ksw_A	452	Structure Of Human C-Src Tyrosine Kinase (Thr338gly		2e-12
1o9u_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		2e-12
3g33_A	308	Crystal Structure Of Cdk4CYCLIN D3 Length = 308		2e-12
3ggf_A	301	Crystal Structure Of Human SerineTHREONINE-Protein		3e-12
4fif_A	346	Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid		3e-12
3say_A	430	Crystal Structure Of Human Glycogen Synthase Kinase		3e-12
2c30_A	321	Crystal Structure Of The Human P21-Activated Kinase		3e-12
1yvj_A	290	Crystal Structure Of The Jak3 Kinase Domain In Comp		3e-12
1yoj_A	283	Crystal Structure Of Src Kinase Domain Length = 283		3e-12
1yol_A	283	Crystal Structure Of Src Kinase Domain In Complex W		3e-12
3oez_A	286	Crystal Structure Of The L317i Mutant Of The Chicke		3e-12
2h8h_A	535	Src Kinase In Complex With A Quinazoline Inhibitor		3e-12
3s95_A	310	Crystal Structure Of The Human Limk1 Kinase Domain		3e-12
2wqb_A	324	Structure Of The Tie2 Kinase Domain In Complex With		4e-12
3geq_A	286	Structural Basis For The Chemical Rescue Of Src Kin		4e-12
4fie_A	423	Full-Length Human Pak4 Length = 423		4e-12
4fk3_A	292	B-Raf Kinase V600e Oncogenic Mutant In Complex With		4e-12
2x4f_A	373	The Crystal Structure Of The Human Myosin Light Cha		4e-12
2qq7_A	286	Crystal Structure Of Drug Resistant Src Kinase Doma		4e-12
3q4z_A	306	Structure Of Unphosphorylated Pak1 Kinase Domain Le		4e-12
1fot_A	318	Structure Of The Unliganded Camp-Dependent Protein		4e-12
1s9i_A	354	X-Ray Structure Of The Human Mitogen-Activated Prot		4e-12
2y4i_C	395	Ksr2-Mek1 Heterodimer Length = 395		4e-12
3mbl_A	328	Crystal Structure Of The Human Mitogen-Activated Pr		4e-12
3dv3_A	322	Mek1 With Pf-04622664 Bound Length = 322		4e-12
2y9q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		4e-12
2p55_A	333	X-Ray Structure Of The Human Mitogen-Activated Prot		4e-12
2ptk_A	453	Chicken Src Tyrosine Kinase Length = 453		5e-12
1s9j_A	341	X-Ray Structure Of The Human Mitogen-Activated Prot		5e-12
3oct_A	265	Crystal Structure Of Bruton's Tyrosine Kinase Mutan		5e-12
1qcf_A	454	Crystal Structure Of Hck In Complex With A Src Fami		5e-12
4fv6_A	360	Crystal Structure Of The Erk2 Complexed With E57 Le		5e-12
2j7t_A	302	Crystal Structure Of Human Serine Threonine Kinase-		5e-12
3h4j_B	336	Crystal Structure Of Pombe Ampk Kdaid Fragment Leng		5e-12
4bc6_A	293	Crystal Structure Of Human Serine Threonine Kinase-		5e-12
2hwo_A	286	Crystal Structure Of Src Kinase Domain In Complex W		5e-12
1wzy_A	368	Crystal Structure Of Human Erk2 Complexed With A Py		5e-12
1tvo_A	368	The Structure Of Erk2 In Complex With A Small Molec		5e-12
3eqc_A	360	X-Ray Structure Of The Human Mitogen-Activated Prot		6e-12
2ojg_A	380	Crystal Structure Of Erk2 In Complex With N,n-dimet		6e-12
4fux_A	360	Crystal Structure Of The Erk2 Complexed With E75 Le		6e-12
4apc_A	350	Crystal Structure Of Human Nima-Related Kinase 1 (N		6e-12
4fv7_A	360	Crystal Structure Of The Erk2 Complexed With E94 Le		6e-12
1v0b_A	288	Crystal Structure Of The T198a Mutant Of Pfpk5 Leng		6e-12
3sa0_A	360	Complex Of Erk2 With Norathyriol Length = 360		6e-12
3zu7_A	365	Crystal Structure Of A Designed Selected Ankyrin Re		6e-12
2z7l_A	366	Unphosphorylated Mitogen Activated Protein Kinase E		6e-12
3c9w_A	357	Crystal Structure Of Erk-2 With Hypothemycin Covale		6e-12
2fys_B	364	Crystal Structure Of Erk2 Complex With Kim Peptide		6e-12
1v0o_A	288	Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulpho		6e-12
3o71_A	358	Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length		6e-12
3r63_A	358	Structure Of Erk2 (Spe) Mutant (S246e) Length = 358		6e-12
2gph_A	364	Docking Motif Interactions In The Map Kinase Erk2 L		7e-12
3zhp_C	294	Human Mst3 (stk24) In Complex With Mo25beta Length		7e-12
1opk_A	495	Structural Basis For The Auto-Inhibition Of C-Abl T		7e-12
4gsb_A	364	Monoclinic Crystal Form Of The Apo-Erk2 Length = 36		7e-12
3qyw_A	364	Crystal Structure Of Erk2 In Complex With An Inhibi		7e-12
2wgj_A	306	X-Ray Structure Of Pf-02341066 Bound To The Kinase		8e-12
1ob3_A	288	Structure Of P. Falciparum Pfpk5 Length = 288		9e-12
3zuv_A	364	Crystal Structure Of A Designed Selected Ankyrin Re		9e-12
2erk_A	365	Phosphorylated Map Kinase Erk2 Length = 365		9e-12
3q6u_A	308	Structure Of The Apo Met Receptor Kinase In The Dua		9e-12
2qnj_A	328	Kinase And Ubiquitin-Associated Domains Of Mark3PAR		9e-12
4gg5_A	319	Crystal Structure Of Cmet In Complex With Novel Inh		9e-12
3lq8_A	302	Structure Of The Kinase Domain Of C-Met Bound To Xl		9e-12
4an2_A	301	Crystal Structures Of Human Mek1 With Carboxamide-B		9e-12
3i5n_A	309	Crystal Structure Of C-Met With Triazolopyridazine		9e-12
3f66_A	298	Human C-Met Kinase In Complex With Quinoxaline Inhi		9e-12
3nyx_A	302	Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-T		1e-11
3q6w_A	307	Structure Of Dually-phosphorylated Met Receptor Kin		1e-11
2g15_A	318	Structural Characterization Of Autoinhibited C-Met		1e-11
2rfn_A	310	X-ray Structure Of C-met With Inhibitor. Length = 3		1e-11
2zoq_A	382	Structural Dissection Of Human Mitogen-Activated Ki		1e-11
3f88_A	349	Glycogen Synthase Kinase 3beta Inhibitor Complex Le		1e-11
1opl_A	537	Structural Basis For The Auto-Inhibition Of C-Abl T		1e-11
2wd1_A	292	Human C-Met Kinase In Complex With Azaindole Inhibi		1e-11
3ckw_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		1e-11
3nz0_A	302	Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 3		1e-11
2xik_A	294	Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K		1e-11
4af3_A	292	Human Aurora B Kinase In Complex With Incenp And Vx		1e-11
3kk8_A	284	Camkii Substrate Complex A Length = 284		1e-11
2fo0_A	495	Organization Of The Sh3-Sh2 Unit In Active And Inac		1e-11
3kk9_A	282	Camkii Substrate Complex B Length = 282		1e-11
3kl8_A	269	Camkiintide Inhibitor Complex Length = 269		1e-11
1gol_A	364	Coordinates Of Rat Map Kinase Erk2 With An Arginine		1e-11
2bfy_A	284	Complex Of Aurora-B With Incenp And Hesperidin. Len		1e-11
3oz6_A	388	Crystal Structure Of Mapk From Cryptosporidium Parv		1e-11
1dbn_A	239	Maackia Amurensis Leukoagglutinin (Lectin) With Sia		2e-11
2vrx_A	285	Structure Of Aurora B Kinase In Complex With Zm4474		2e-11
3uto_A	573	Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-		2e-11
3og7_A	289	B-Raf Kinase V600e Oncogenic Mutant In Complex With		2e-11
1koa_A	491	Twitchin Kinase Fragment (C.Elegans), Autoregulated		2e-11
2bfx_B	284	Mechanism Of Aurora-B Activation By Incenp And Inhi		2e-11
3sls_A	304	Crystal Structure Of Human Mek-1 Kinase In Complex		2e-11
3gbz_A	329	Structure Of The Cmgc Cdk Kinase From Giardia Lambl		2e-11
3c1x_A	373	Crystal Structure Of The Tyrosine Kinase Domain Of		2e-11
2bdw_A	362	Crystal Structure Of The Auto-Inhibited Kinase Doma		2e-11
3dkc_A	317	Sgx Clone 5698a65kfg1h1 Length = 317		2e-11
3ckx_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		2e-11
1r0p_A	312	Crystal Structure Of The Tyrosine Kinase Domain Of		2e-11
3cth_A	314	Crystal Structure Of The Tyrosine Kinase Domain Of		2e-11
2dq7_X	283	Crystal Structure Of Fyn Kinase Domain Complexed Wi		2e-11
3a4p_A	319	Human C-Met Kinase Domain Complexed With 6-Benzylox		2e-11
1fat_A	252	Phytohemagglutinin-L Length = 252		2e-11
1pme_A	380	Structure Of Penta Mutant Human Erk2 Map Kinase Com		2e-11
3q4t_A	322	Crystal Structure Of Activin Receptor Type-Iia (Acv		2e-11
2r0i_A	327	Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len		2e-11
3a7f_A	303	Human Mst3 Kinase Length = 303		3e-11
3fe3_A	328	Crystal Structure Of The Kinase Mark3PAR-1: T211a-S		3e-11
2w4o_A	349	Crystal Structure Of Human Camk4 In Complex With 4-		3e-11
1zmu_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		3e-11
3qti_A	314	C-Met Kinase In Complex With Nvp-Bvu972 Length = 31		3e-11
1g8w_A	233	Improved Structure Of Phytohemagglutinin-L From The		3e-11
3pjc_A	315	Crystal Structure Of Jak3 Complexed With A Potent A		3e-11
3iec_A	319	Helicobacter Pylori Caga Inhibits Par1MARK FAMILY K		3e-11
3mtl_A	324	Crystal Structure Of The Pctaire1 Kinase In Complex		3e-11
3tei_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		3e-11
3dkg_A	317	Sgx Clone 5698a109kfg1h1 Length = 317		3e-11
3orx_A	316	Pdk1 Mutant Bound To Allosteric Disulfide Fragment		3e-11
2j51_A	325	Crystal Structure Of Human Ste20-Like Kinase Bound		3e-11
3ujo_A	281	Galactose-Specific Seed Lectin From Dolichos Lablab		4e-11
3pwy_A	311	Crystal Structure Of An Extender (Spd28345)-Modifie		4e-11
4hvd_A	314	Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h		4e-11
3lxk_A	327	Structural And Thermodynamic Characterization Of Th		4e-11
2hak_A	328	Catalytic And Ubiqutin-Associated Domains Of Mark1P		4e-11
1h1w_A	289	High Resolution Crystal Structure Of The Human Pdk1		4e-11
1z5m_A	286	Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr		4e-11
4e20_A	290	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		4e-11
1uu9_A	286	Structure Of Human Pdk1 Kinase Domain In Complex Wi		4e-11
3nus_A	286	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra		5e-11
4e1z_A	291	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		5e-11
3nun_A	292	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lea		5e-11
1h4l_A	292	Structure And Regulation Of The Cdk5-P25(Nck5a) Com		5e-11
3lxn_A	318	Structural And Thermodynamic Characterization Of Th		5e-11
3qc4_A	314	Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length =		5e-11
3nax_A	311	Pdk1 In Complex With Inhibitor Mp7 Length = 311		5e-11
1lul_A	253	Db58, A Legume Lectin From Dolichos Biflorus Length		5e-11
1zmv_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		5e-11
3kb7_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		5e-11
2xch_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		5e-11
2v5q_A	315	Crystal Structure Of Wild-type Plk-1 Kinase Domain		5e-11
1uu3_A	310	Structure Of Human Pdk1 Kinase Domain In Complex Wi		5e-11
3f69_A	311	Crystal Structure Of The Mycobacterium Tuberculosis		6e-11
2j0l_A	276	Crystal Structure Of A The Active Conformation Of T		6e-11
3nay_A	311	Pdk1 In Complex With Inhibitor Mp6 Length = 311		6e-11
2jfm_A	325	Crystal Structure Of Human Ste20-Like Kinase (Unlig		6e-11
3h9o_A	311	Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1)		6e-11
2r7b_A	312	Crystal Structure Of The Phosphoinositide-Dependent		6e-11
3iop_A	312	Pdk-1 In Complex With The Inhibitor Compound-8i Len		6e-11
3rwp_A	311	Discovery Of A Novel, Potent And Selective Inhibito		6e-11
2yac_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		6e-11
3sc1_A	311	Novel Isoquinolone Pdk1 Inhibitors Discovered Throu		6e-11
2biy_A	310	Structure Of Pdk1-S241a Mutant Kinase Domain Length		6e-11
2qlu_A	314	Crystal Structure Of Activin Receptor Type Ii Kinas		7e-11
1ua2_A	346	Crystal Structure Of Human Cdk7 Length = 346		7e-11
4fg7_A	293	Crystal Structure Of Human Calcium/calmodulin-depen		7e-11
4h3q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		7e-11
2z7q_A	321	Crystal Structure Of The N-Terminal Kinase Domain O		8e-11
4fg9_A	320	Crystal Structure Of Human Calcium/calmodulin-depen		8e-11
4fg8_A	315	Crystal Structure Of Human Calcium/calmodulin-depen		8e-11
2uv2_A	287	Crystal Structure Of Human Ste20-Like Kinase Bound		8e-11
2r5t_A	373	Crystal Structure Of Inactive Serum And Glucocortic		8e-11
1mru_A	311	Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycob		8e-11
3ori_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain L33d		8e-11
3f61_A	311	Crystal Structure Of M. Tuberculosis Pknb Leu33aspV		8e-11
3orm_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain D76a		9e-11
2wzj_A	327	Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82		9e-11
3g51_A	325	Structural Diversity Of The Active Conformation Of		9e-11
3hrc_A	311	Crystal Structure Of A Mutant Of Human Pdk1 Kinase		9e-11
1ad5_A	438	Src Family Kinase Hck-Amp-Pnp Complex Length = 438		9e-11
2jfl_A	325	Crystal Structure Of Human Ste20-Like Kinase ( Diph		9e-11
1zmw_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		9e-11
4fr4_A	384	Crystal Structure Of Human SerineTHREONINE-Protein		9e-11
1o6y_A	299	Catalytic Domain Of Pknb Kinase From Mycobacterium		9e-11
4a07_A	311	Human Pdk1 Kinase Domain In Complex With Allosteric		1e-10
4el9_A	305	Structure Of N-Terminal Kinase Domain Of Rsk2 With		1e-10
3ubd_A	304	Structure Of N-Terminal Domain Of Rsk2 Kinase In Co		1e-10
1zys_A	273	Co-Crystal Structure Of Checkpoint Kinase Chk1 With		1e-10
1avb_A	226	Arcelin-1 From Phaseolus Vulgaris L Length = 226		1e-10
3bz3_A	276	Crystal Structure Analysis Of Focal Adhesion Kinase		1e-10
1a06_A	332	Calmodulin-Dependent Protein Kinase From Rat Length		1e-10
2j0m_B	276	Crystal Structure A Two-Chain Complex Between The F		1e-10
2e9v_A	268	Structure Of H-Chk1 Complexed With A859017 Length =		1e-10
2ayp_A	269	Crystal Structure Of Chk1 With An Indol Inhibitor L		1e-10
4fsm_A	279	Crystal Structure Of The Chk1 Length = 279		1e-10
4ebw_A	304	Structure Of Focal Adhesion Kinase Catalytic Domain		1e-10
3lmg_A	344	Crystal Structure Of The Erbb3 Kinase Domain In Com		1e-10
2ghg_A	269	H-Chk1 Complexed With A431994 Length = 269		1e-10
2vz6_A	313	Structure Of Human Calcium Calmodulin Dependent Pro		1e-10
2etm_A	281	Crystal Structure Of Focal Adhesion Kinase Domain C		1e-10
2x8e_A	276	Discovery Of A Novel Class Of Triazolones As Checkp		1e-10
2i1m_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An		1e-10
1mp8_A	281	Crystal Structure Of Focal Adhesion Kinase (Fak) Le		1e-10
4fsn_A	278	Crystal Structure Of The Chk1 Length = 278		1e-10
3ot3_A	273	X-Ray Crystal Structure Of Compound 22k Bound To Hu		1e-10
3mi9_A	351	Crystal Structure Of Hiv-1 Tat Complexed With Human		1e-10
3bhh_A	295	Crystal Structure Of Human Calcium/calmodulin-depen		1e-10
4ec8_A	373	Structure Of Full Length Cdk9 In Complex With Cycli		1e-10
2hog_A	322	Crystal Structure Of Chek1 In Complex With Inhibito		1e-10
3kex_A	325	Crystal Structure Of The Catalytically Inactive Kin		1e-10
3jvr_A	271	Characterization Of The Chk1 Allosteric Inhibitor B		1e-10
2xck_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		1e-10
2jkk_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		1e-10
2jc6_A	334	Crystal Structure Of Human Calmodulin-Dependent Pro		1e-10
4bcf_A	331	Structure Of Cdk9 In Complex With Cyclin T And A 2-		1e-10
2r0u_A	323	Crystal Structure Of Chek1 In Complex With Inhibito		1e-10
2ogv_A	317	Crystal Structure Of The Autoinhibited Human C-Fms		1e-10
4fsy_A	279	Crystal Structure Of The Chk1 Length = 279		2e-10
2br1_A	297	Structure-Based Design Of Novel Chk1 Inhibitors: In		2e-10
1u54_A	291	Crystal Structures Of The Phosphorylated And Unphos		2e-10
1ia8_A	289	The 1.7 A Crystal Structure Of Human Cell Cycle Che		2e-10
3blh_A	331	Crystal Structure Of Human Cdk9CYCLINT1 Length = 33		2e-10
1zlt_A	295	Crystal Structure Of Chk1 Complexed With A Hymenald		2e-10
3pxk_A	282	Focal Adhesion Kinase Catalytic Domain In Complex W		2e-10
3q5i_A	504	Crystal Structure Of Pbanka_031420 Length = 504		2e-10
1zrz_A	364	Crystal Structure Of The Catalytic Domain Of Atypic		2e-10
1u46_A	291	Crystal Structure Of The Unphosphorylated Kinase Do		2e-10
4fst_A	269	Crystal Structure Of The Chk1 Length = 269		2e-10
3zh8_A	349	A Novel Small Molecule Apkc Inhibitor Length = 349		2e-10
4fsw_A	279	Crystal Structure Of The Chk1 Length = 279		2e-10
2rku_A	294	Structure Of Plk1 In Complex With Bi2536 Length = 2		2e-10
4ft3_A	279	Crystal Structure Of The Chk1 Length = 279		2e-10
3a8w_A	345	Crystal Structure Of Pkciota Kinase Domain Length =		2e-10
2jkm_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		2e-10
3thb_A	333	Structure Of Plk1 Kinase Domain In Complex With A B		2e-10
4fsz_A	279	Crystal Structure Of The Chk1 Length = 279		2e-10
2ou7_A	335	Structure Of The Catalytic Domain Of Human Polo-Lik		2e-10
3bea_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A P		2e-10
4dc2_A	396	Structure Of Pkc In Complex With A Substrate Peptid		2e-10
2j0j_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		2e-10
2ydj_A	276	Discovery Of Checkpoint Kinase Inhibitor Azd7762 By		2e-10
3lcd_A	329	Inhibitor Bound To A Dfg-In Structure Of The Kinase		2e-10
4e7w_A	394	Structure Of Gsk3 From Ustilago Maydis Length = 394		2e-10
2jam_A	304	Crystal Structure Of Human Calmodulin-Dependent Pro		2e-10
2fmd_A	240	Structural Basis Of Carbohydrate Recognition By Bow		2e-10
2j0k_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		3e-10
1ung_A	292	Structural Mechanism For The Inhibition Of Cdk5-P25		3e-10
3o96_A	446	Crystal Structure Of Human Akt1 With An Allosteric		3e-10
4ejn_A	446	Crystal Structure Of Autoinhibited Form Of Akt1 In		3e-10
4gt5_A	306	Crystal Structure Of The Inactive Trka Kinase Domai		3e-10
4g31_A	299	Crystal Structure Of Gsk6414 Bound To Perk (R587-R1		3e-10
4f0i_A	300	Crystal Structure Of Apo Trka Length = 300		3e-10
3ika_A	331	Crystal Structure Of Egfr 696-1022 T790m Mutant Cov		3e-10
3cd3_A	377	Crystal Structure Of Phosphorylated Human Feline Sa		3e-10
2jiu_A	328	Crystal Structure Of Egfr Kinase Domain T790m Mutat		3e-10
3uib_A	362	Map Kinase Lmampk10 From Leishmania Major In Comple		3e-10
4aoj_A	329	Human Trka In Complex With The Inhibitor Az-23 Leng		3e-10
3bel_A	315	X-Ray Structure Of Egfr In Complex With Oxime Inhib		3e-10
4hjo_A	337	Crystal Structure Of The Inactive Egfr Tyrosine Kin		3e-10
2jit_A	327	Crystal Structure Of Egfr Kinase Domain T790m Mutat		3e-10
4g5p_A	330	Crystal Structure Of Egfr Kinase T790m In Complex W		3e-10
2rfd_A	324	Crystal Structure Of The Complex Between The Egfr K		3e-10
2acx_A	576	Crystal Structure Of G Protein Coupled Receptor Kin		3e-10
4i24_A	329	Structure Of T790m Egfr Kinase Domain Co-crystalliz		3e-10
2j5f_A	327	Crystal Structure Of Egfr Kinase Domain In Complex		3e-10
3pg1_A	362	Map Kinase Lmampk10 From Leishmania Major (1.95 Ang		3e-10
4hzs_A	341	Crystal Structure Of Ack1 Kinase Domain With C-term		3e-10
4g5j_A	330	Crystal Structure Of Egfr Kinase In Complex With Bi		4e-10
2gs2_A	330	Crystal Structure Of The Active Egfr Kinase Domain		4e-10
2jiv_A	328	Crystal Structure Of Egfr Kinase Domain T790m Mutat		4e-10
4hzr_A	277	Crystal Structure Of Ack1 Kinase Domain Length = 27		4e-10
1xkk_A	352	Egfr Kinase Domain Complexed With A Quinazoline Inh		4e-10
1m14_A	333	Tyrosine Kinase Domain From Epidermal Growth Factor		4e-10
4i23_A	329	Crystal Structure Of The Wild-type Egfr Kinase Doma		4e-10
3nyn_A	576	Crystal Structure Of G Protein-Coupled Receptor Kin		4e-10
3lzb_A	327	Egfr Kinase Domain Complexed With An Imidazo[2,1-B]		4e-10
2gs7_A	330	Crystal Structure Of The Inactive Egfr Kinase Domai		4e-10
2v7o_A	336	Crystal Structure Of Human Calcium-Calmodulin-Depen		4e-10
2j5e_A	327	Crystal Structure Of Egfr Kinase Domain In Complex		4e-10
3vjo_A	334	Crystal Structure Of The Wild-Type Egfr Kinase Doma		4e-10
4fsu_A	279	Crystal Structure Of The Chk1 Length = 279		4e-10
3bkb_A	377	Crystal Structure Of Human Feline Sarcoma Viral Onc		4e-10
3d5u_A	317	Crystal Structure Of A Wildtype Polo-Like Kinase 1		5e-10
1yrp_A	278	Catalytic Domain Of Human Zip Kinase Phosphorylated		5e-10
3txo_A	353	Pkc Eta Kinase In Complex With A Naphthyridine Leng		5e-10
2fst_X	367	Mitogen Activated Protein Kinase P38alpha (d176a+f3		5e-10
2fso_X	367	Mitogen Activated Protein Kinase P38alpha (D176a) A		6e-10
2fsl_X	367	Mitogen Activated Protein Kinase P38alpha (D176a+f3		6e-10
1luf_A	343	Crystal Structure Of The Musk Tyrosine Kinase: Insi		6e-10
4ewh_B	275	Co-Crystal Structure Of Ack1 With Inhibitor Length		7e-10
3bhy_A	283	Crystal Structure Of Human Death Associated Protein		7e-10
3eqp_B	276	Crystal Structure Of Ack1 With Compound T95 Length		7e-10
3i79_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		7e-10
4e5a_X	360	The W197a Mutant Of P38a Map Kinase Length = 360		8e-10
4id7_A	273	Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-		8e-10
4e4l_A	302	Jak1 Kinase (Jh1 Domain) In Complex With Compound 3		8e-10
3cqu_A	342	Crystal Structure Of Akt-1 Complexed With Substrate		8e-10
4gv1_A	340	Pkb Alpha In Complex With Azd5363 Length = 340		8e-10
1gzn_A	335	Structure Of Pkb Kinase Domain Length = 335		8e-10
3ocb_A	341	Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor		8e-10
3ma6_A	298	Crystal Structure Of Kinase Domain Of Tgcdpk1 In Pr		8e-10
2j90_A	304	Crystal Structure Of Human Zip Kinase In Complex Wi		8e-10
1u59_A	287	Crystal Structure Of The Zap-70 Kinase Domain In Co		9e-10
3aln_A	327	Crystal Structure Of Human Non-Phosphorylated Mkk4		9e-10
3eyg_A	290	Crystal Structures Of Jak1 And Jak2 Inhibitor Compl		9e-10
1mrv_A	339	Crystal Structure Of An Inactive Akt2 Kinase Domain		1e-09
1gzk_A	315	Molecular Mechanism For The Regulation Of Protein K		1e-09
3ku2_A	507	Crystal Structure Of Inactivated Form Of Cdpk1 From		1e-09
3hx4_A	508	Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg		1e-09
3d5v_A	317	Crystal Structure Of An Activated (Thr->asp) Polo-L		1e-09
3lm0_A	327	Crystal Structure Of Human SerineTHREONINE KINASE 1		1e-09
3oef_X	360	Crystal Structure Of Y323f Inactive Mutant Of P38al		1e-09
3db6_A	301	Crystal Structure Of An Activated (Thr->asp) Polo-L		1e-09
3d5w_A	317	Crystal Structure Of A Phosphorylated Polo-Like Kin		1e-09
3soa_A	444	Full-Length Human Camkii Length = 444		1e-09
3nnx_A	354	Crystal Structure Of Phosphorylated P38 Alpha In Co		1e-09
1di9_A	360	The Structure Of P38 Mitogen-Activated Protein Kina		1e-09
3w2o_A	331	Egfr Kinase Domain T790m/l858r Mutant With Tak-285		1e-09
1zzl_A	351	Crystal Structure Of P38 With Triazolopyridine Leng		1e-09
3d7z_A	360	Crystal Structure Of P38 Kinase In Complex With A B		1e-09
1ioa_A	240	Arcelin-5, A Lectin-Like Defense Protein From Phase		1e-09
3hec_A	348	P38 In Complex With Imatinib Length = 348		1e-09
2npq_A	367	A Novel Lipid Binding Site In The P38 Alpha Map Kin		1e-09
3s3i_A	349	P38 Kinase Crystal Structure In Complex With Small		1e-09
3k3j_A	362	P38alpha Bound To Novel Dfg-Out Compound Pf-0041612		1e-09
2dyl_A	318	Crystal Structure Of Human Mitogen-Activated Protei		1e-09
3odz_X	360	Crystal Structure Of P38alpha Y323r Active Mutant L		1e-09
2itn_A	327	Crystal Structure Of Egfr Kinase Domain G719s Mutat		1e-09
3nnu_A	354	Crystal Structure Of P38 Alpha In Complex With Dp13		1e-09
3d83_A	360	Crystal Structure Of P38 Kinase In Complex With A B		1e-09
3hvc_A	362	Crystal Structure Of Human P38alpha Map Kinase Leng		1e-09
3zsg_A	362	X-Ray Structure Of P38alpha Bound To Tak-715 Length		1e-09
1m7q_A	366	Crystal Structure Of P38 Map Kinase In Complex With		1e-09
3od6_X	360	Crystal Structure Of P38alpha Y323t Active Mutant L		2e-09
3ody_X	360	Crystal Structure Of P38alpha Y323q Active Mutant L		2e-09
3k3i_A	350	P38alpha Bound To Novel Dgf-Out Compound Pf-0021595		2e-09
1y8g_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		2e-09
1ian_A	366	Human P38 Map Kinase Inhibitor Complex Length = 366		2e-09
2lgc_A	359	Joint Nmr And X-Ray Refinement Reveals The Structur		2e-09
2baj_A	365	P38alpha Bound To Pyrazolourea Length = 365		2e-09
3hrb_A	359	P38 Kinase Crystal Structure In Complex With Small		2e-09
1oz1_A	372	P38 Mitogen-Activated Kinase In Complex With 4-Azai		2e-09
2gfs_A	372	P38 Kinase Crystal Structure In Complex With Ro3201		2e-09
3gcu_A	360	Human P38 Map Kinase In Complex With Rl48 Length =		2e-09
2itt_A	327	Crystal Structure Of Egfr Kinase Domain L858r Mutat		2e-09
2bal_A	365	P38alpha Map Kinase Bound To Pyrazoloamine Length =		2e-09
3ug1_A	334	Crystal Structure Of The Mutated Egfr Kinase Domain		2e-09
3mpt_A	371	Crystal Structure Of P38 Kinase In Complex With A P		2e-09
4i21_A	329	Crystal Structure Of L858r + T790m Egfr Kinase Doma		2e-09
3fi4_A	372	P38 Kinase Crystal Structure In Complex With Ro4499		2e-09
2jed_A	352	The Crystal Structure Of The Kinase Domain Of The P		2e-09
2x7f_A	326	Crystal Structure Of The Kinase Domain Of Human Tra		2e-09
1bl6_A	379	The Complex Structure Of The Map Kinase P38SB216995		2e-09
3kq7_A	380	Structure Of Human P38alpha With N-[4-Methyl-3-(6-{		2e-09
4i1z_A	329	Crystal Structure Of The Monomeric (v948r) Form Of		2e-09
3e92_A	371	Crystal Structure Of P38 Kinase In Complex With A B		2e-09
3dt1_A	383	P38 Complexed With A Quinazoline Inhibitor Length =		2e-09
4i20_A	329	Crystal Structure Of Monomeric (v948r) Primary Onco		2e-09
3gop_A	361	Crystal Structure Of The Egf Receptor Juxtamembrane		2e-09
2eb2_A	334	Crystal Structure Of Mutated Egfr Kinase Domain (G7		2e-09
2eb3_A	334	Crystal Structure Of Mutated Egfr Kinase Domain (L8		2e-09
3i7c_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		2e-09
2y8o_A	362	Crystal Structure Of Human P38alpha Complexed With		2e-09
1o6l_A	337	Crystal Structure Of An Activated Akt/protein Kinas		2e-09
2baq_A	365	P38alpha Bound To Ro3201195 Length = 365		2e-09
1wmk_A	321	Human Death-Associated Kinase Drp-1, Mutant S308d D		2e-09
1xjd_A	345	Crystal Structure Of Pkc-Theta Complexed With Staur		3e-09
2i0v_A	335	C-Fms Tyrosine Kinase In Complex With A Quinolone I		3e-09
1o6k_A	336	Structure Of Activated Form Of Pkb Kinase Domain S4		3e-09
1vjy_A	303	Crystal Structure Of A Naphthyridine Inhibitor Of H		3e-09
2y7j_A	365	Structure Of Human Phosphorylase Kinase, Gamma 2 Le		3e-09
1ove_A	366	The Structure Of P38 Alpha In Complex With A Dihydr		3e-09
2jdo_A	342	Structure Of Pkb-Beta (Akt2) Complexed With Isoquin		3e-09
1b6c_B	342	Crystal Structure Of The Cytoplasmic Domain Of The		3e-09
2a2a_A	321	High-resolution Crystallographic Analysis Of The Au		3e-09
2ozo_A	613	Autoinhibited Intact Human Zap-70 Length = 613		3e-09
1z9x_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		3e-09
3iw4_A	360	Crystal Structure Of Pkc Alpha In Complex With Nvp-		3e-09
1zws_A	288	Crystal Structure Of The Catalytic Domain Of Human		3e-09
2a27_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		3e-09
3e87_A	335	Crystal Structures Of The Kinase Domain Of Akt2 In		3e-09
1rw8_A	301	Crystal Structure Of Tgf-Beta Receptor I Kinase Wit		3e-09
3p1a_A	311	Structure Of Human Membrane-Associated Tyrosine- An		3e-09
2pvf_A	334	Crystal Structure Of Tyrosine Phosphorylated Activa		3e-09
3e3p_A	360	Glycogen Synthase Kinase From Leishmania Major Leng		3e-09
1py5_A	326	Crystal Structure Of Tgf-Beta Receptor I Kinase Wit		3e-09
2wot_A	306	Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)		3e-09
3f3z_A	277	Crystal Structure Of Cryptosporidium Parvum Calcium		3e-09
3cly_A	334	Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase		3e-09
3tzm_A	309	Tgf-Beta Receptor Type 1 In Complex With Sb431542 L		4e-09
2qg5_A	294	Cryptosporidium Parvum Calcium Dependent Protein Ki		4e-09
3mh2_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		4e-09
2f9g_A	353	Crystal Structure Of Fus3 Phosphorylated On Tyr182		4e-09
2ya9_A	361	Crystal Structure Of The Autoinhibited Form Of Mous		4e-09
2b9f_A	353	Crystal Structure Of Non-Phosphorylated Fus3 Length		4e-09
2ivt_A	314	Crystal Structure Of Phosphorylated Ret Tyrosine Ki		5e-09
4agu_A	311	Crystal Structure Of The Human Cdkl1 Kinase Domain		5e-09
2gnj_A	350	Pka Three Fold Mutant Model Of Rho-Kinase With Y-27		5e-09
2bqp_A	234	The Structure Of The Pea Lectin-D-Glucopyranose Com		6e-09
1i44_A	306	Crystallographic Studies Of An Activation Loop Muta		6e-09
3lco_A	324	Inhibitor Bound To A Dfg-Out Structure Of The Kinas		6e-09
1ql6_A	298	The Catalytic Mechanism Of Phosphorylase Kinase Pro		6e-09
2b9h_A	353	Crystal Structure Of Fus3 With A Docking Motif From		6e-09
2ivs_A	314	Crystal Structure Of Non-Phosphorylated Ret Tyrosin		6e-09
4ewq_A	383	Human P38 Alpha Mapk In Complex With A Pyridazine B		7e-09
2pzp_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		7e-09
3dxn_A	287	Crystal Structure Of The Calcium-dependent Kinase F		7e-09
3gcp_A	360	Human P38 Map Kinase In Complex With Sb203580 Lengt		7e-09
1phk_A	298	Two Structures Of The Catalytic Domain Of Phosphory		7e-09
2pwl_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		7e-09
2puu_A	348	Crystal Structure Of P38 Complex With 1-(5-Tert-But		7e-09
3igo_A	486	Crystal Structure Of Cryptosporidium Parvum Cdpk1,		8e-09
3hzt_A	467	Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme4		8e-09
3l9p_A	367	Crystal Structure Of The Anaplastic Lymphoma Kinase		8e-09
1irk_A	306	Crystal Structure Of The Tyrosine Kinase Domain Of		8e-09
2wei_A	287	Crystal Structure Of The Kinase Domain Of Cryptospo		9e-09
3fzo_A	277	Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosin		9e-09
3lct_A	344	Crystal Structure Of The Anaplastic Lymphoma Kinase		9e-09
3dfa_A	286	Crystal Structure Of Kinase Domain Of Calcium-depen		9e-09
2gtm_A	348	Mutated Mouse P38 Map Kinase Domain In Complex With		9e-09
3cc6_A	281	Crystal Structure Of Kinase Domain Of Protein Tyros		9e-09
2pz5_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		9e-09
2oza_B	366	Structure Of P38alpha Complex Length = 366		9e-09
2wel_A	327	Crystal Structure Of Su6656-Bound CalciumCALMODULIN		9e-09
4h1j_A	293	Crystal Structure Of Pyk2 With The Pyrazole 13a Len		1e-08
3p4k_A	370	The Third Conformation Of P38a Map Kinase Observed		1e-08
1lew_A	360	Crystal Structure Of Map Kinase P38 Complexed To Th		1e-08
2vn9_A	301	Crystal Structure Of Human Calcium Calmodulin Depen		1e-08
1vzo_A	355	The Structure Of The N-Terminal Kinase Domain Of Ms		1e-08
3eta_A	317	Kinase Domain Of Insulin Receptor Complexed With A		1e-08
3pls_A	298	Ron In Complex With Ligand Amp-Pnp Length = 298		1e-08
2ivv_A	314	Crystal Structure Of Phosphorylated Ret Tyrosine Ki		1e-08
3my0_A	305	Crystal Structure Of The Acvrl1 (Alk1) Kinase Domai		1e-08
2psq_A	370	Crystal Structure Of Unphosphorylated Unactivated W		1e-08
3tg1_A	380	Crystal Structure Of P38alpha In Complex With A Map		1e-08
2pvy_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		1e-08
1bmk_A	379	The Complex Structure Of The Map Kinase P38SB218655		1e-08
1gjo_A	316	The Fgfr2 Tyrosine Kinase Domain Length = 316		1e-08
3ri1_A	313	Crystal Structure Of The Catalytic Domain Of Fgfr2		1e-08
3b2t_A	311	Structure Of Phosphotransferase Length = 311		1e-08
2phk_A	277	The Crystal Structure Of A Phosphorylase Kinase Pep		1e-08
2gnf_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		1e-08
2gng_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		1e-08
3cik_A	689	Human Grk2 In Complex With Gbetagamma Subunits Leng		1e-08
1xh9_A	350	Crystal Structures Of Protein Kinase B Selective In		1e-08
3nie_A	429	Crystal Structure Of Pf11_0147 Length = 429		1e-08
3krw_A	688	Human Grk2 In Complex With Gbetgamma Subunits And B		2e-08
2pzr_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		2e-08
1omw_A	689	Crystal Structure Of The Complex Between G Protein-		2e-08
3psc_A	695	Bovine Grk2 In Complex With Gbetagamma Subunits Len		2e-08
3o8p_A	360	Conformational Plasticity Of P38 Map Kinase Dfg Mot		2e-08
3zvx_A	261	Structure Of The Lectin From Platypodium Elegans In		2e-08
2yjr_A	342	Structure Of F1174l Mutant Anaplastic Lymphoma Kina		2e-08
4fnw_A	327	Crystal Structure Of The Apo F1174l Anaplastic Lymp		2e-08
3lw0_A	304	Igf-1rk In Complex With Ligand Msc1609119a-1 Length		2e-08
3lvp_A	336	Crystal Structure Of Bisphosphorylated Igf1-R Kinas		2e-08
1jqh_A	308	Igf-1 Receptor Kinase Domain Length = 308		2e-08
3qqu_A	301	Cocrystal Structure Of Unphosphorylated Igf With Py		2e-08
3mh0_A	360	Mutagenesis Of P38 Map Kinase Eshtablishes Key Role		2e-08
1p4o_A	322	Structure Of Apo Unactivated Igf-1r Kinase Domain A		2e-08
3vn9_A	340	Rifined Crystal Structure Of Non-Phosphorylated Map		2e-08
3coi_A	353	Crystal Structure Of P38delta Kinase Length = 353		2e-08
4ae6_A	343	Structure And Function Of The Human Sperm-specific		2e-08
1m7n_A	322	Crystal Structure Of Unactivated Apo Insulin-Like G		2e-08
3o23_A	305	Human Unphosphorylated Igf1-R Kinase Domain In Comp		2e-08
3mh3_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		2e-08
3i81_A	315	Crystal Structure Of Insulin-Like Growth Factor 1 R		2e-08
1yw2_A	360	Mutated Mus Musculus P38 Kinase (Mp38) Length = 360		2e-08
1ywr_A	360	Crystal Structure Analysis Of Inactive P38 Kinase D		2e-08
2ghl_A	348	Mutant Mus Musculus P38 Kinase Domain In Complex Wi		2e-08
2xuu_A	334	Crystal Structure Of A Dap-Kinase 1 Mutant Length =		2e-08
2py3_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		2e-08
3d94_A	301	Crystal Structure Of The Insulin-Like Growth Factor		2e-08
3lij_A	494	Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820)		2e-08
3ama_A	351	Protein Kinase A Sixfold Mutant Model Of Aurora B W		2e-08
2q0b_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		2e-08
2oj9_A	307	Structure Of Igf-1r Kinase Domain Complexed With A		2e-08
4exu_A	371	Mapk13, Inactive Form Length = 371		2e-08
4ae9_A	343	Structure And Function Of The Human Sperm-specific		2e-08
1ctp_E	350	Structure Of The Mammalian Catalytic Subunit Of Cam		2e-08
1cdk_A	350	Camp-Dependent Protein Kinase Catalytic Subunit (E.		2e-08
1cmk_E	350	Crystal Structures Of The Myristylated Catalytic Su		2e-08
3nx8_A	351	Human Camp Dependent Protein Kinase In Complex With		3e-08
1ir3_A	306	Phosphorylated Insulin Receptor Tyrosine Kinase In		3e-08
3agl_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		3e-08
1rqq_A	306	Crystal Structure Of The Insulin Receptor Kinase In		3e-08
3agm_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		3e-08
3mh1_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		3e-08
3e7o_A	360	Crystal Structure Of Jnk2 Length = 360		3e-08
2z8c_A	303	Phosphorylated Insulin Receptor Tyrosine Kinase In		3e-08
3npc_A	364	Crystal Structure Of Jnk2 Complexed With Birb796 Le		3e-08
1p14_A	306	Crystal Structure Of A Catalytic-Loop Mutant Of The		3e-08
3ekk_A	307	Insulin Receptor Kinase Complexed With An Inhibitor		3e-08
2p0c_A	313	Catalytic Domain Of The Proto-Oncogene Tyrosine-Pro		3e-08
2w4j_A	277	X-Ray Structure Of A Dap-Kinase 2-277 Length = 277		3e-08
3dfc_B	295	Crystal Structure Of A Glycine-Rich Loop Mutant Of		3e-08
2yfx_A	327	Structure Of L1196m Mutant Anaplastic Lymphoma Kina		4e-08
1wvw_A	278	Crystal Structures Of Kinase Domain Of Dap Kinase I		4e-08
4dce_A	333	Crystal Structure Of Human Anaplastic Lymphoma Kina		4e-08
2xb7_A	315	Structure Of Human Anaplastic Lymphoma Kinase In Co		4e-08
4fnz_A	327	Crystal Structure Of Human Anaplastic Lymphoma Kina		4e-08
1viw_B	205	Tenebrio Molitor Alpha-Amylase-Inhibitor Complex Le		4e-08
2w4k_A	302	X-Ray Structure Of A Dap-Kinase 2-302 Length = 302		4e-08
3c4w_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		4e-08
2yak_A	285	Structure Of Death-Associated Protein Kinase 1 (Dap		4e-08
3mvj_A	371	Human Cyclic Amp-Dependent Protein Kinase Pka Inhib		4e-08
1k3a_A	299	Structure Of The Insulin-Like Growth Factor 1 Recep		4e-08
3t8o_A	543	Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolu		4e-08
3fme_A	290	Crystal Structure Of Human Mitogen-Activated Protei		4e-08
2yhv_A	342	Structure Of L1196m Mutant Anaplastic Lymphoma Kina		4e-08
2xp2_A	327	Structure Of The Human Anaplastic Lymphoma Kinase I		4e-08
2x0g_A	334	X-ray Structure Of A Dap-kinase Calmodulin Complex		4e-08
3f5u_A	295	Crystal Structure Of The Death Associated Protein K		4e-08
3c4x_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		4e-08
1p4f_A	293	Death Associated Protein Kinase Catalytic Domain Wi		4e-08
3aox_A	344	X-Ray Crystal Structure Of Human Anaplastic Lymphom		4e-08
3qc9_A	543	Crystal Structure Of Cross-Linked Bovine Grk1 T8cN4		4e-08
2yjs_A	342	Structure Of C1156y Mutant Anaplastic Lymphoma Kina		4e-08
1smh_A	350	Protein Kinase A Variant Complex With Completely Or		4e-08
4b99_A	398	Crystal Structure Of Mapk7 (Erk5) With Inhibitor Le		4e-08
3py3_A	380	Crystal Structure Of Phosphorylated P38alpha Map Ki		4e-08
1ig1_A	294	1.8a X-Ray Structure Of Ternary Complex Of A Cataly		4e-08
1svh_A	350	Crystal Structure Of Protein Kinase A In Complex Wi		4e-08
2xzs_A	312	Death Associated Protein Kinase 1 Residues 1-312 Le		4e-08
2c1a_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		5e-08
4fnx_A	327	Crystal Structure Of The Apo R1275q Anaplastic Lymp		5e-08
3dnd_A	350	Camp-Dependent Protein Kinase Pka Catalytic Subunit		5e-08
2pml_X	348	Crystal Structure Of Pfpk7 In Complex With An Atp A		5e-08
3kn5_A	325	Crystal Structure Of The C-Terminal Kinase Domain O		5e-08
1stc_E	350	Camp-Dependent Protein Kinase, Alpha-Catalytic Subu		5e-08
2zv2_A	298	Crystal Structure Of Human CalciumCALMODULIN-Depend		5e-08
3qd2_B	332	Crsytal Structure Of Mouse Perk Kinase Domain Lengt		5e-08
3oht_A	389	Crystal Structure Of Salmo Salar P38alpha Length =		5e-08
2uzt_A	336	Pka Structures Of Akt, Indazole-Pyridine Inhibitors		5e-08
2y0a_A	326	Structure Of Dapk1 Construct Residues 1-304 Length		5e-08
2jds_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		5e-08
1q8w_A	350	The Catalytic Subunit Of Camp-Dependent Protein Kin		5e-08
3l9m_A	351	Crystal Structure Of Pkab3 (Pka Triple Mutant V123a		5e-08
2sba_A	253	Soybean Agglutinin Complexed With 2,6-Pentasacchari		5e-08
1qnw_A	242	Lectin Ii From Ulex Europaeus Length = 242		5e-08
2f7e_E	351	Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoqu		6e-08
3gu4_A	295	Crystal Structure Of Dapkq23v-Amppnp Length = 295		6e-08
4ic7_A	442	Crystal Structure Of The Erk5 Kinase Domain In Comp		6e-08
1xh7_A	350	Crystal Structures Of Protein Kinase B Selective In		6e-08
4fob_A	353	Crystal Structure Of Human Anaplastic Lymphoma Kina		6e-08
1n47_A	233	Isolectin B4 From Vicia Villosa In Complex With The		6e-08
2zm3_A	308	Complex Structure Of Insulin-Like Growth Factor Rec		6e-08
3gqi_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		6e-08
2e7q_A	237	Crystal Structure Of Basic Winged Bean Lectin In Co		7e-08
1wbf_A	242	Winged Bean Lectin, Saccharide Free Form Length = 2		8e-08
2y4i_B	319	Ksr2-Mek1 Heterodimer Length = 319		8e-08
1wbl_A	241	Winged Bean Lectin Complexed With Methyl-Alpha-D-Ga		8e-08
1q61_A	350	Pka Triple Mutant Model Of Pkb Length = 350		9e-08
3gi3_A	360	Crystal Structure Of A N-Phenyl-N'-Naphthylurea Ana		9e-08
2f2u_A	402	Crystal Structure Of The Rho-Kinase Kinase Domain L		9e-08
3gu8_A	295	Crystal Structure Of Dapkl93g With N6-Cyclopentylad		9e-08
1szm_A	350	Dual Binding Mode Of Bisindolylmaleimide 2 To Prote		1e-07
3tub_A	293	Crystal Structure Of Syk Kinase Domain With 1-(5-(6		1e-07
3vf8_A	299	Crystal Structure Of Spleen Tyrosine Kinase Syk Cat		1e-07
1gz9_A	239	High-Resolution Crystal Structure Of Erythrina Cris		1e-07
3pze_A	358	Jnk1 In Complex With Inhibitor Length = 358		1e-07
3emg_A	291	Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylami		1e-07
4dfl_A	274	Crystal Structure Of Spleen Tyrosine Kinase Complex		1e-07
3srv_B	277	Crystal Structure Of Spleen Tyrosine Kinase (Syk) I		2e-07
3srv_A	277	Crystal Structure Of Spleen Tyrosine Kinase (Syk) I		2e-07
1xba_A	291	Crystal Structure Of Apo Syk Tyrosine Kinase Domain		2e-07
3vum_A	370	Crystal Structure Of A Cysteine-deficient Mutant M7		2e-07
4f4p_A	273	Syk In Complex With Ligand Lasw836 Length = 273		2e-07
3elj_A	369	Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine		2e-07
1fgk_A	310	Crystal Structure Of The Tyrosine Kinase Domain Of		2e-07
1dhk_B	223	Structure Of Porcine Pancreatic Alpha-Amylase Lengt		2e-07
3ka0_A	320	Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4		2e-07
4f63_A	309	Crystal Structure Of Human Fibroblast Growth Factor		2e-07
3a62_A	327	Crystal Structure Of Phosphorylated P70s6k1 Length		2e-07
3rhx_B	306	Crystal Structure Of The Catalytic Domain Of Fgfr1		2e-07
2i0e_A	353	Structure Of Catalytic Domain Of Human Protein Kina		2e-07
3kxx_A	317	Structure Of The Mutant Fibroblast Growth Factor Re		2e-07
3c4f_A	302	Fgfr Tyrosine Kinase Domain In Complex With 3-(3- M		2e-07
3js2_A	317	Crystal Structure Of Minimal Kinase Domain Of Fibro		2e-07
4fl3_A	635	Structural And Biophysical Characterization Of The		2e-07
3a60_A	327	Crystal Structure Of Unphosphorylated P70s6k1 (Form		2e-07
3gql_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		2e-07
3n9x_A	432	Crystal Structure Of Map Kinase From Plasmodium Ber		2e-07
3tt0_A	382	Co-Structure Of Fibroblast Growth Factor Receptor 1		2e-07
3vul_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		2e-07
1fny_A	237	Legume Lectin Of The Bark Of Robinia Pseudoacacia.		2e-07
1q24_A	350	Pka Double Mutant Model Of Pkb In Complex With Mgat		2e-07
1kob_A	387	Twitchin Kinase Fragment (Aplysia), Autoregulated P		2e-07
4fl2_A	636	Structural And Biophysical Characterization Of The		2e-07
2vo0_A	351	Structure Of Pka-Pkb Chimera Complexed With C-(4-(4		3e-07
3pfq_A	674	Crystal Structure And Allosteric Activation Of Prot		3e-07
2jdt_A	351	Structure Of Pka-Pkb Chimera Complexed With Isoquin		3e-07
3fpm_A	325	Crystal Structure Of A Squarate Inhibitor Bound To		3e-07
2uvy_A	351	Structure Of Pka-pkb Chimera Complexed With Methyl-		3e-07
2pzy_A	324	Structure Of Mk2 Complexed With Compound 76 Length		3e-07
2p3g_X	327	Crystal Structure Of A Pyrrolopyridine Inhibitor Bo		3e-07
3r2y_A	319	Mk2 Kinase Bound To Compound 1 Length = 319		3e-07
3r2b_A	318	Mk2 Kinase Bound To Compound 5b Length = 318		3e-07
2jbo_A	326	Protein Kinase Mk2 In Complex With An Inhibitor (Cr		3e-07
2gu8_A	337	Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel		3e-07
2iwi_A	312	Crystal Structure Of The Human Pim2 In Complex With		3e-07
1kwp_A	400	Crystal Structure Of Mapkap2 Length = 400		3e-07
2onl_C	406	Crystal Structure Of The P38a-Mapkap Kinase 2 Heter		3e-07
1sfy_A	239	Crystal Structure Of Recombinant Erythrina Corallod		3e-07
3mfr_A	351	Cask-4m Cam Kinase Domain, Native Length = 351		3e-07
2oza_A	356	Structure Of P38alpha Complex Length = 356		3e-07
3gok_A	334	Binding Site Mapping Of Protein Ligands Length = 33		4e-07
1apm_E	350	2.0 Angstrom Refined Crystal Structure Of The Catal		4e-07
1jbp_E	350	Crystal Structure Of The Catalytic Subunit Of Camp-		4e-07
3fhi_A	350	Crystal Structure Of A Complex Between The Catalyti		4e-07
2qur_A	350	Crystal Structure Of F327aK285P MUTANT OF CAMP-Depe		4e-07
4dfx_E	350	Crystal Structure Of Myristoylated K7c Catalytic Su		4e-07
2erz_E	351	Crystal Structure Of C-amp Dependent Kinase (pka) B		4e-07
1fmo_E	350	Crystal Structure Of A Polyhistidine-Tagged Recombi		4e-07
3qal_E	350	Crystal Structure Of Arg280ala Mutant Of Catalytic		4e-07
1bkx_A	350	A Binary Complex Of The Catalytic Subunit Of Camp-D		4e-07
1rjb_A	344	Crystal Structure Of Flt3 Length = 344		4e-07
3qfv_A	415	Mrck Beta In Complex With Tpca-1 Length = 415		4e-07
3fpq_A	290	Crystal Structure Of The Kinase Domain Of Wnk1 Leng		4e-07
3pvb_A	345	Crystal Structure Of (73-244)ria:c Holoenzyme Of Ca		4e-07
1l3r_E	350	Crystal Structure Of A Transition State Mimic Of Th		4e-07
2qcs_A	350	A Complex Structure Between The Catalytic And Regul		5e-07
2pel_A	236	Peanut Lectin Length = 236		5e-07
3tku_A	433	Mrck Beta In Complex With Fasudil Length = 433		5e-07
1ydt_E	350	Structure Of Camp-Dependent Protein Kinase, Alpha-C		5e-07
1j3h_A	350	Crystal Structure Of Apoenzyme Camp-Dependent Prote		5e-07
3vuk_A	370	Crystal Structure Of A Cysteine-deficient Mutant M5		5e-07
1bzw_A	232	Peanut Lectin Complexed With C-Lactose Length = 232		5e-07
3o17_A	370	Crystal Structure Of Jnk1-Alpha1 Isoform Length = 3		5e-07
1uzy_A	242	Erythrina Crystagalli Lectin Length = 242		5e-07
2i6l_A	320	Crystal Structure Of Human Mitogen Activated Protei		6e-07
4dg3_E	371	Crystal Structure Of R336a Mutant Of Camp-dependent		6e-07
3fi2_A	353	Crystal Structure Of Jnk3 With Amino-Pyrazole Inhib		6e-07
3pp0_A	338	Crystal Structure Of The Kinase Domain Of Human Her		6e-07
3ttj_A	464	Crystal Structure Of Jnk3 Complexed With Cc-359, A		6e-07
1yxs_A	293	Crystal Structure Of Kinase Pim1 With P123m Mutatio		6e-07
3fv8_A	355	Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Le		7e-07
1cm8_A	367	Phosphorylated Map Kinase P38-Gamma Length = 367		7e-07
3enm_A	316	The Structure Of The Map2k Mek6 Reveals An Autoinhi		7e-07
1jnk_A	423	The C-Jun N-Terminal Kinase (Jnk3s) Complexed With		7e-07
4dfy_A	371	Crystal Structure Of R194a Mutant Of Camp-Dependent		7e-07
2exc_X	356	Inhibitor Complex Of Jnk3 Length = 356		7e-07
1pmn_A	364	Crystal Structure Of Jnk3 In Complex With An Imidaz		7e-07
3n35_A	242	Erythrina Corallodendron Lectin Mutant (Y106g) With		7e-07
3ptg_A	363	Design And Synthesis Of A Novel, Orally Efficacious		7e-07
3oxi_A	362	Design And Synthesis Of Disubstituted Thiophene And		7e-07
2b1p_A	355	Inhibitor Complex Of Jnk3 Length = 355		7e-07
4h36_A	356	Crystal Structure Of Jnk3 In Complex With Atf2 Pept		7e-07
2o0u_A	364	Crystal Structure Of Human Jnk3 Complexed With N-{3		7e-07
1ax0_A	239	Erythrina Corallodendron Lectin In Complex With N-A		8e-07
2ok1_A	365	Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3		8e-07
3fi3_A	364	Crystal Structure Of Jnk3 With Indazole Inhibitor,		8e-07
1yhs_A	273	Crystal Structure Of Pim-1 Bound To Staurosporine L		9e-07
2g01_A	370	Pyrazoloquinolones As Novel, Selective Jnk1 Inhibit		9e-07
3o7l_B	350	Crystal Structure Of Phospholamban (1-19):pka C-Sub		1e-06
1lte_A	239	Structure Of A Legume Lectin With An Ordered N-Link		1e-06
1syk_A	350	Crystal Structure Of E230q Mutant Of Camp-Dependent		1e-06
1bjq_A	253	The Dolichos Biflorus Seed Lectin In Complex With A		1e-06
3vug_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		1e-06
1ukh_A	369	Structural Basis For The Selective Inhibition Of Jn		1e-06
2bil_B	313	The Human Protein Kinase Pim1 In Complex With Its C		1e-06
3cy3_A	314	Crystal Structure Of Human Proto-Oncogene Serine Th		1e-06
1xws_A	313	Crystal Structure Of The Human Pim1 Kinase Domain L		1e-06
3jpv_A	313	Crystal Structure Of Human Proto-Oncogene Serine Th		1e-06
3f2a_A	300	Crystal Structure Of Human Pim-1 In Complex With Da		1e-06
1xqz_A	300	Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolut		1e-06
3cxw_A	314	Crystal Structure Of Human Proto-Oncogene Serine Th		1e-06
1ywv_A	293	Crystal Structures Of Proto-Oncogene Kinase Pim1: A		1e-06
2r9s_A	356	C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Qu		1e-06
2bik_B	313	Human Pim1 Phosphorylated On Ser261 Length = 313		1e-06
2xrw_A	371	Linear Binding Motifs For Jnk And For Calcineurin A		1e-06
3r00_A	299	The Discovery Of Novel Benzofuran-2-Carboxylic Acid		1e-06
3kvx_A	364	Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Le		1e-06
4aw2_A	437	Crystal Structure Of Cdc42 Binding Protein Kinase A		1e-06
3jxw_A	294	Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-		1e-06
3vud_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		1e-06
2xix_A	301	Protein Kinase Pim-1 In Complex With Fragment-1 Fro		1e-06
2xiy_A	301	Protein Kinase Pim-1 In Complex With Fragment-2 Fro		1e-06
1fyu_A	255	Crystal Structure Of Erythrina Corallodendron Lecti		1e-06
2xj0_A	301	Protein Kinase Pim-1 In Complex With Fragment-4 Fro		1e-06
3ma3_A	313	Crystal Structure Of Human Proto-Oncogene Serine Th		1e-06
2j2i_B	312	Crystal Structure Of The Humab Pim1 In Complex With		1e-06
3dcv_A	328	Crystal Structure Of Human Pim1 Kinase Complexed Wi		1e-06
3c4e_A	273	Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7		1e-06
4dtk_A	276	Novel And Selective Pan-Pim Kinase Inhibitor Length		1e-06
4alv_A	328	Benzofuropyrimidinone Inhibitors Of Pim-1 Length =		1e-06
3vuh_A	370	Crystal Structure Of A Cysteine-deficient Mutant M3		1e-06
4as0_A	273	Cyclometalated Phthalimides As Protein Kinase Inhib		1e-06
1ofs_A	187	Pea Lectin-sucrose Complex Length = 187		1e-06
2wnt_A	330	Crystal Structure Of The Human Ribosomal Protein S6		1e-06
3vui_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		1e-06
2ltn_A	181	Design, Expression, And Crystallization Of Recombin		1e-06
3a99_A	320	Structure Of Pim-1 Kinase Crystallized In The Prese		2e-06
3uix_A	298	Crystal Structure Of Pim1 Kinase In Complex With Sm		2e-06
2obj_A	333	Crystal Structure Of Human Pim-1 Kinase In Complex		2e-06
3v3v_A	379	Structural And Functional Analysis Of Quercetagetin		2e-06
4a7c_A	308	Crystal Structure Of Pim1 Kinase With Etp46546 Leng		2e-06
3rny_A	346	Crystal Structure Of Human Rsk1 C-Terminal Kinase D		2e-06
1rin_A	180	X-Ray Crystal Structure Of A Pea Lectin-Trimannosid		2e-06
3qam_E	350	Crystal Structure Of Glu208ala Mutant Of Catalytic		2e-06
4dym_A	301	Crystal Structure Of The Acvr1 Kinase Domain In Com		3e-06
3mtf_A	301	Crystal Structure Of The Acvr1 Kinase In Complex Wi		3e-06
3h9r_A	330	Crystal Structure Of The Kinase Domain Of Type I Ac		3e-06
3uc3_A	361	The Crystal Structure Of Snf1-Related Kinase 2.3 Le		4e-06
2xs0_A	386	Linear Binding Motifs For Jnk And For Calcineurin A		4e-06
1rdq_E	350	Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of		4e-06
1lof_C	181	X-Ray Structure Of A Biantennary Octasaccharide-Lec		5e-06
1lgc_A	181	Interaction Of A Legume Lectin With The N2 Fragment		5e-06
1lgb_A	181	Interaction Of A Legume Lectin With The N2 Fragment		5e-06
1loa_A	181	Three-Dimensional Structures Of Complexes Of Lathyr		5e-06
3gp0_A	348	Crystal Structure Of Human Mitogen Activated Protei		6e-06
1n3o_A	252	Pterocarcpus Angolensis Lectin In Complex With Alph		6e-06
2h34_A	309	Apoenzyme Crystal Structure Of The Tuberculosis Ser		6e-06
3g2f_A	336	Crystal Structure Of The Kinase Domain Of Bone Morp		6e-06
1tki_A	321	Autoinhibited Serine Kinase Domain Of The Giant Mus		6e-06
2qr8_A	342	2.0a X-ray Structure Of C-terminal Kinase Domain Of		6e-06
1q8o_A	252	Pterocartpus Angolensis Lectin Pal In Complex With		7e-06
2oh4_A	316	Crystal Structure Of Vegfr2 With A Benzimidazole-Ur		7e-06
3r1n_A	317	Mk3 Kinase Bound To Compound 5b Length = 317		7e-06
3fhr_A	336	High Resolution Crystal Structure Of Mitogen-Activa		7e-06
3hko_A	345	Crystal Structure Of A Cdpk Kinase Domain From Cryp		7e-06
3v8s_A	410	Human Rho-Associated Protein Kinase 1 (Rock 1) In C		7e-06
1nxk_A	400	Crystal Structure Of Staurosporine Bound To Map Kap		7e-06
2esm_A	415	Crystal Structure Of Rock 1 Bound To Fasudil Length		7e-06
2v55_A	406	Mechanism Of Multi-site Phosphorylation From A Rock		8e-06
3hng_A	360	Crystal Structure Of Vegfr1 In Complex With N-(4-ch		8e-06
3gc9_A	370	The Structure Of P38beta C119s, C162s In Complex Wi		8e-06
2lal_A	181	Crystal Structure Determination And Refinement At 2		9e-06
3rp9_A	458	Crystal Structure Of The Apo Mapk From Toxoplasma G		9e-06

>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349

Iteration: 1
 Score =  197 bits (502), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 110/298 (36%), Positives = 171/298 (57%), Gaps = 7/298 (2%)
Query: 309 EDWEIQCGA-RRFKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS 367
           ED E+  G  +RF   EL   +  F  +N++G GGFG+VY+G +   G  VA+KR+    
Sbjct: 16  EDPEVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLAD-GTLVAVKRLKEER 74
Query: 368 QQGMK-EFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXX 426
            QG + +F  E+  +    HRNL++L G+C    E LLVY Y+ NGS             
Sbjct: 75  XQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQP 134
Query: 427 XXXTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE 486
               W +R +I +G A+ L YLH+ C+ +++HRDVK +NILLD    A +GDFGLAK+ +
Sbjct: 135 PL-DWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 193
Query: 487 HGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAA--AE 544
           +        + GT+G++APE   TGK++  TDV+ YG+++LE+  G+R+ +  + A   +
Sbjct: 194 YKDXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDD 253
Query: 545 LLLVDWVKELHLEGEITQAIDQTLD-YYDLAEAELVLNLGLFCSAPNPVYRPDMRRVV 601
           ++L+DWVK L  E ++   +D  L   Y   E E ++ + L C+  +P+ RP M  VV
Sbjct: 254 VMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVV 311

>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326

Iteration: 1
 Score =  195 bits (496), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 109/298 (36%), Positives = 170/298 (57%), Gaps = 7/298 (2%)
Query: 309 EDWEIQCGA-RRFKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS 367
           ED E+  G  +RF   EL   +  F  +N++G GGFG+VY+G +   G  VA+KR+    
Sbjct: 8   EDPEVHLGQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLAD-GXLVAVKRLKEER 66
Query: 368 QQGMK-EFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXX 426
            QG + +F  E+  +    HRNL++L G+C    E LLVY Y+ NGS             
Sbjct: 67  TQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQP 126
Query: 427 XXXTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE 486
               W +R +I +G A+ L YLH+ C+ +++HRDVK +NILLD    A +GDFGLAK+ +
Sbjct: 127 PL-DWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 185
Query: 487 HGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAA--AE 544
           +        + G +G++APE   TGK++  TDV+ YG+++LE+  G+R+ +  + A   +
Sbjct: 186 YKDXHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDD 245
Query: 545 LLLVDWVKELHLEGEITQAIDQTLD-YYDLAEAELVLNLGLFCSAPNPVYRPDMRRVV 601
           ++L+DWVK L  E ++   +D  L   Y   E E ++ + L C+  +P+ RP M  VV
Sbjct: 246 VMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVV 303

>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321

Iteration: 1
 Score =  152 bits (384), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 102/290 (35%), Positives = 153/290 (52%), Gaps = 17/290 (5%)
Query: 319 RFKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEI 378
           R    +L   T  F  + L+G G FG+VY+G++   G +VA+KR    S QG++EF  EI
Sbjct: 28  RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRD-GAKVALKRRTPESSQGIEEFETEI 86
Query: 379 MSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKIL 438
            ++   RH +LV L G+C +++E++L+Y Y+ NG+                +W+QR +I 
Sbjct: 87  ETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSM-SWEQRLEIC 145
Query: 439 IGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTH--- 495
           IG A+ L YLH    + ++HRDVK  NILLD     K+ DFG++K    G     TH   
Sbjct: 146 IGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISK---KGTELDQTHLXX 199
Query: 496 -IVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKEL 554
            + GTLGY+ PE    G+ T  +DVYS+G+++ EV C R +I        + L +W  E 
Sbjct: 200 VVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVES 259
Query: 555 HLEGEITQAIDQTLDYYDLAEAELVLNLG---LFCSAPNPVYRPDMRRVV 601
           H  G++ Q +D  L   D    E +   G   + C A +   RP M  V+
Sbjct: 260 HNNGQLEQIVDPNL--ADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVL 307

>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327

Iteration: 1
 Score =  151 bits (381), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 102/290 (35%), Positives = 153/290 (52%), Gaps = 17/290 (5%)
Query: 319 RFKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEI 378
           R    +L   T  F  + L+G G FG+VY+G++   G +VA+KR    S QG++EF  EI
Sbjct: 28  RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRD-GAKVALKRRTPESSQGIEEFETEI 86
Query: 379 MSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKIL 438
            ++   RH +LV L G+C +++E++L+Y Y+ NG+                +W+QR +I 
Sbjct: 87  ETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSM-SWEQRLEIC 145
Query: 439 IGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTH--- 495
           IG A+ L YLH    + ++HRDVK  NILLD     K+ DFG++K    G     TH   
Sbjct: 146 IGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISK---KGTELGQTHLXX 199
Query: 496 -IVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKEL 554
            + GTLGY+ PE    G+ T  +DVYS+G+++ EV C R +I        + L +W  E 
Sbjct: 200 VVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVES 259
Query: 555 HLEGEITQAIDQTLDYYDLAEAELVLNLG---LFCSAPNPVYRPDMRRVV 601
           H  G++ Q +D  L   D    E +   G   + C A +   RP M  V+
Sbjct: 260 HNNGQLEQIVDPNL--ADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVL 307

>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score =  147 bits (371), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 98/292 (33%), Positives = 153/292 (52%), Gaps = 20/292 (6%)
Query: 320 FKYAELASVTKGFGEQ------NLVGSGGFGRVYRGLMPSLGLEVAIKRIGH----NSQQ 369
           F + EL +VT  F E+      N +G GGFG VY+G + +    VA+K++       +++
Sbjct: 15  FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEE 72
Query: 370 GMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXX 429
             ++F  EI  M + +H NLV+L G+    D+L LVY Y+PNGS                
Sbjct: 73  LKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGS--LLDRLSCLDGTPPL 130
Query: 430 TWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGA 489
           +W  R KI  G A  + +LHE  +   +HRD+K +NILLD    AK+ DFGLA+  E  A
Sbjct: 131 SWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFA 187
Query: 490 NP-QTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLV 548
                + IVGT  Y+APE  R G+ T  +D+YS+G+++LE+  G  +++  +   +LLL 
Sbjct: 188 QTVMXSRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHR-EPQLLLD 245
Query: 549 DWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRV 600
              +    E  I   ID+ ++  D    E + ++   C       RPD+++V
Sbjct: 246 IKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKV 297

>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score =  146 bits (369), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 98/292 (33%), Positives = 152/292 (52%), Gaps = 20/292 (6%)
Query: 320 FKYAELASVTKGFGEQ------NLVGSGGFGRVYRGLMPSLGLEVAIKRIGH----NSQQ 369
           F + EL +VT  F E+      N +G GGFG VY+G + +    VA+K++       +++
Sbjct: 15  FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEE 72
Query: 370 GMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXX 429
             ++F  EI  M + +H NLV+L G+    D+L LVY Y+PNGS                
Sbjct: 73  LKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGS--LLDRLSCLDGTPPL 130
Query: 430 TWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGA 489
           +W  R KI  G A  + +LHE  +   +HRD+K +NILLD    AK+ DFGLA+  E  A
Sbjct: 131 SWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFA 187
Query: 490 NP-QTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLV 548
                  IVGT  Y+APE  R G+ T  +D+YS+G+++LE+  G  +++  +   +LLL 
Sbjct: 188 QTVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHR-EPQLLLD 245
Query: 549 DWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRV 600
              +    E  I   ID+ ++  D    E + ++   C       RPD+++V
Sbjct: 246 IKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKV 297

>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301

Iteration: 1
 Score =  146 bits (368), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 98/292 (33%), Positives = 152/292 (52%), Gaps = 20/292 (6%)
Query: 320 FKYAELASVTKGFGEQ------NLVGSGGFGRVYRGLMPSLGLEVAIKRIGH----NSQQ 369
           F + EL +VT  F E+      N +G GGFG VY+G + +    VA+K++       +++
Sbjct: 9   FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEE 66
Query: 370 GMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXX 429
             ++F  EI  M + +H NLV+L G+    D+L LVY Y+PNGS                
Sbjct: 67  LKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGS--LLDRLSCLDGTPPL 124
Query: 430 TWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGA 489
           +W  R KI  G A  + +LHE  +   +HRD+K +NILLD    AK+ DFGLA+  E  A
Sbjct: 125 SWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFA 181
Query: 490 NP-QTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLV 548
                  IVGT  Y+APE  R G+ T  +D+YS+G+++LE+  G  +++  +   +LLL 
Sbjct: 182 QXVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHR-EPQLLLD 239
Query: 549 DWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRV 600
              +    E  I   ID+ ++  D    E + ++   C       RPD+++V
Sbjct: 240 IKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKV 291

>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298

Iteration: 1
 Score =  139 bits (351), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 97/292 (33%), Positives = 147/292 (50%), Gaps = 20/292 (6%)
Query: 320 FKYAELASVTKGFGEQ------NLVGSGGFGRVYRGLMPSLGLEVAIKRIGH----NSQQ 369
           F + EL +VT  F E+      N  G GGFG VY+G + +    VA+K++       +++
Sbjct: 6   FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEE 63
Query: 370 GMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXX 429
             ++F  EI    + +H NLV+L G+    D+L LVY Y PNGS                
Sbjct: 64  LKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPL-- 121
Query: 430 TWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGA 489
           +W  R KI  G A  + +LHE  +   +HRD+K +NILLD    AK+ DFGLA+  E  A
Sbjct: 122 SWHXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFA 178
Query: 490 NP-QTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLV 548
                + IVGT  Y APE  R G+ T  +D+YS+G+++LE+  G  +++  +   +LLL 
Sbjct: 179 QXVXXSRIVGTTAYXAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHR-EPQLLLD 236
Query: 549 DWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRV 600
              +    E  I   ID+  +  D    E   ++   C       RPD+++V
Sbjct: 237 IKEEIEDEEKTIEDYIDKKXNDADSTSVEAXYSVASQCLHEKKNKRPDIKKV 288

>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271

Iteration: 1
 Score = 97.1 bits (240), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 103/213 (48%), Gaps = 27/213 (12%)
Query: 335 QNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRL----RHRNLV 390
           + ++G GGFG+VYR     +G EVA+K   H+  + + + +  +    +L    +H N++
Sbjct: 12  EEIIGIGGFGKVYRAFW--IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNII 69
Query: 391 QLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHE 450
            L G C K+  L LV ++   G                  W       + IA+ + YLH+
Sbjct: 70  ALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNW------AVQIARGMNYLHD 123
Query: 451 ECNQRVVHRDVKPSNILLDTYLN--------AKLGDFGLAKIYEHGANPQTTHI--VGTL 500
           E    ++HRD+K SNIL+   +          K+ DFGLA+ +      +TT +   G  
Sbjct: 124 EAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWH-----RTTKMSAAGAY 178
Query: 501 GYLAPELTRTGKATTSTDVYSYGILMLEVACGR 533
            ++APE+ R    +  +DV+SYG+L+ E+  G 
Sbjct: 179 AWMAPEVIRASMFSKGSDVWSYGVLLWELLTGE 211

>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333

Iteration: 1
 Score = 95.5 bits (236), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 109/205 (53%), Gaps = 20/205 (9%)
Query: 335 QNLVGSGGFGRVYRGLMPSLG----LEVAIK--RIGHNSQQGMKEFVAEIMSMGRLRHRN 388
           Q ++G+G FG VY+G++ +      + VAIK  + G+  +Q + +F+ E   MG+  H N
Sbjct: 49  QKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRV-DFLGEAGIMGQFSHHN 107
Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYL 448
           +++L G   K   ++++ +Y+ NG+                   Q   +L GIA  + YL
Sbjct: 108 IIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVL----QLVGMLRGIAAGMKYL 163
Query: 449 HEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVG----TLGYLA 504
               N   VHRD+   NIL+++ L  K+ DFGL+++ E   +P+ T+        + + A
Sbjct: 164 ---ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLED--DPEATYTTSGGKIPIRWTA 218
Query: 505 PELTRTGKATTSTDVYSYGILMLEV 529
           PE     K T+++DV+S+GI+M EV
Sbjct: 219 PEAISYRKFTSASDVWSFGIVMWEV 243

>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294

Iteration: 1
 Score = 94.4 bits (233), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 60/199 (30%), Positives = 95/199 (47%), Gaps = 11/199 (5%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRI---GHNSQQGMKEFVAEIMSMGRLRHRNLVQLHG 394
           +G GG   VY      L ++VAIK I       ++ +K F  E+ +  +L H+N+V +  
Sbjct: 19  LGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMID 78
Query: 395 WCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQ 454
              + D   LV +Y+  G                   +   +IL GI  +        + 
Sbjct: 79  VDEEDDCYYLVMEYI-EGPTLSEYIESHGPLSVDTAINFTNQILDGIKHA-------HDM 130
Query: 455 RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKAT 514
           R+VHRD+KP NIL+D+    K+ DFG+AK     +  QT H++GT+ Y +PE  +     
Sbjct: 131 RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATD 190
Query: 515 TSTDVYSYGILMLEVACGR 533
             TD+YS GI++ E+  G 
Sbjct: 191 ECTDIYSIGIVLYEMLVGE 209

>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317

Iteration: 1
 Score = 92.0 bits (227), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 109/209 (52%), Gaps = 6/209 (2%)
Query: 327 SVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEF-VAEIMSMGRLR 385
           S +  F +   +G+G +  VY+GL  + G+ VA+K +  +S++G     + EI  M  L+
Sbjct: 2   SSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELK 61
Query: 386 HRNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSL 445
           H N+V+L+     +++L LV++++ N                    +        + Q L
Sbjct: 62  HENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGL 121
Query: 446 LYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAP 505
            + HE    +++HRD+KP N+L++     KLGDFGLA+ +    N  ++ +V TL Y AP
Sbjct: 122 AFCHE---NKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV-TLWYRAP 177
Query: 506 ELTRTGKA-TTSTDVYSYGILMLEVACGR 533
           ++    +  +TS D++S G ++ E+  G+
Sbjct: 178 DVLMGSRTYSTSIDIWSCGCILAEMITGK 206

>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex Length = 302

Iteration: 1
 Score = 91.3 bits (225), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 63/203 (31%), Positives = 110/203 (54%), Gaps = 15/203 (7%)
Query: 335 QNLVGSGGFGRVYRGLMPSLGLE---VAIKRI-GHNSQQGMKEFVAEIMSMGRLRHRNLV 390
           + ++G+G FG V RG + + G +   VAIK + G  +++  +EF++E   MG+  H N++
Sbjct: 21  EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNII 80
Query: 391 QLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHE 450
           +L G       ++++ +++ NG+                T  Q   +L GIA  + YL E
Sbjct: 81  RLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQF----TVIQLVGMLRGIASGMRYLAE 136
Query: 451 ECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IYEHGANPQTTHIVG---TLGYLAPE 506
                 VHRD+   NIL+++ L  K+ DFGL++ + E+ ++P  T  +G    + + APE
Sbjct: 137 ---MSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPE 193
Query: 507 LTRTGKATTSTDVYSYGILMLEV 529
                K T+++D +SYGI+M EV
Sbjct: 194 AIAFRKFTSASDAWSYGIVMWEV 216

>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291

Iteration: 1
 Score = 90.5 bits (223), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 109/203 (53%), Gaps = 15/203 (7%)
Query: 335 QNLVGSGGFGRVYRGLMPSLGLE---VAIKRI-GHNSQQGMKEFVAEIMSMGRLRHRNLV 390
           + ++G+G FG V RG + + G +   VAIK + G  +++  +EF++E   MG+  H N++
Sbjct: 19  EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNII 78
Query: 391 QLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHE 450
           +L G       ++++ +++ NG+                   Q   +L GIA  + YL E
Sbjct: 79  RLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVI----QLVGMLRGIASGMRYLAE 134
Query: 451 ECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IYEHGANPQTTHIVG---TLGYLAPE 506
                 VHRD+   NIL+++ L  K+ DFGL++ + E+ ++P  T  +G    + + APE
Sbjct: 135 ---MSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPE 191
Query: 507 LTRTGKATTSTDVYSYGILMLEV 529
                K T+++D +SYGI+M EV
Sbjct: 192 AIAFRKFTSASDAWSYGIVMWEV 214

>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5) Length = 295

Iteration: 1
 Score = 89.7 bits (221), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 65/202 (32%), Positives = 104/202 (51%), Gaps = 15/202 (7%)
Query: 335 QNLVGSGGFGRVYRGLMPSLG---LEVAIK--RIGHNSQQGMKEFVAEIMSMGRLRHRNL 389
           + ++G+G FG V  G +   G   L VAIK  ++G+  +Q  ++F+ E   MG+  H N+
Sbjct: 27  ERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQ-RRDFLGEASIMGQFDHPNI 85
Query: 390 VQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLH 449
           + L G   K   +++V +Y+ NGS                T  Q   +L GI+  + YL 
Sbjct: 86  IHLEGVVTKSKPVMIVTEYMENGS----LDTFLKKNDGQFTVIQLVGMLRGISAGMKYLS 141
Query: 450 EECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLG--YLAPEL 507
              +   VHRD+   NIL+++ L  K+ DFGL+++ E       T   G +   + APE 
Sbjct: 142 ---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEA 198
Query: 508 TRTGKATTSTDVYSYGILMLEV 529
               K T+++DV+SYGI+M EV
Sbjct: 199 IAFRKFTSASDVWSYGIVMWEV 220

>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 89.0 bits (219), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 59/197 (29%), Positives = 101/197 (51%), Gaps = 12/197 (6%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNS--QQGMKEFVAEIMSMGRLRHRNLVQLHGW 395
           +G+G FG V+R      G +VA+K +       + + EF+ E+  M RLRH N+V   G 
Sbjct: 45  IGAGSFGTVHRAEW--HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGA 102
Query: 396 CRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIG--IAQSLLYLHEECN 453
             +   L +V +Y+  GS                  D+R ++ +   +A+ + YLH   N
Sbjct: 103 VTQPPNLSIVTEYLSRGSLYRLLHKSGAREQL----DERRRLSMAYDVAKGMNYLHNR-N 157
Query: 454 QRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKA 513
             +VHRD+K  N+L+D     K+ DFGL+++ +      +    GT  ++APE+ R   +
Sbjct: 158 PPIVHRDLKSPNLLVDKKYTVKVCDFGLSRL-KASXFLXSKXAAGTPEWMAPEVLRDEPS 216
Query: 514 TTSTDVYSYGILMLEVA 530
              +DVYS+G+++ E+A
Sbjct: 217 NEKSDVYSFGVILWELA 233

>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373

Iteration: 1
 Score = 89.0 bits (219), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 104/201 (51%), Gaps = 15/201 (7%)
Query: 336 NLVGSGGFGRVYRGLM--PSLG-LEVAIK--RIGHNSQQGMKEFVAEIMSMGRLRHRNLV 390
            +VG+G FG V  G +  PS   + VAIK  ++G+  +Q  ++F+ E   MG+  H N++
Sbjct: 51  KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASIMGQFDHPNII 109
Query: 391 QLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHE 450
           +L G   K   +++V +Y+ NGS                   Q   +L GIA  + YL  
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI----QLVGMLRGIASGMKYL-- 163
Query: 451 ECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLG--YLAPELT 508
             +   VHRD+   NIL+++ L  K+ DFGLA++ E       T   G +   + +PE  
Sbjct: 164 -SDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 509 RTGKATTSTDVYSYGILMLEV 529
              K T+++DV+SYGI++ EV
Sbjct: 223 AYRKFTSASDVWSYGIVLWEV 243

>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344

Iteration: 1
 Score = 88.2 bits (217), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 64/201 (31%), Positives = 104/201 (51%), Gaps = 15/201 (7%)
Query: 336 NLVGSGGFGRVYRGLM--PSLG-LEVAIK--RIGHNSQQGMKEFVAEIMSMGRLRHRNLV 390
            +VG+G FG V  G +  PS   + VAIK  ++G+  +Q  ++F+ E   MG+  H N++
Sbjct: 22  KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASIMGQFDHPNII 80
Query: 391 QLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHE 450
           +L G   K   +++V +Y+ NGS                   Q   +L GIA  + YL +
Sbjct: 81  RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI----QLVGMLRGIASGMKYLSD 136
Query: 451 ECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLG--YLAPELT 508
                 VHRD+   NIL+++ L  K+ DFGL+++ E       T   G +   + +PE  
Sbjct: 137 ---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 193
Query: 509 RTGKATTSTDVYSYGILMLEV 529
              K T+++DV+SYGI++ EV
Sbjct: 194 AYRKFTSASDVWSYGIVLWEV 214

>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373

Iteration: 1
 Score = 87.8 bits (216), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/201 (31%), Positives = 104/201 (51%), Gaps = 15/201 (7%)
Query: 336 NLVGSGGFGRVYRGLM--PSLG-LEVAIK--RIGHNSQQGMKEFVAEIMSMGRLRHRNLV 390
            +VG+G FG V  G +  PS   + VAIK  ++G+  +Q  ++F+ E   MG+  H N++
Sbjct: 51  KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASIMGQFDHPNII 109
Query: 391 QLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHE 450
           +L G   K   +++V +Y+ NGS                   Q   +L GIA  + YL  
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI----QLVGMLRGIASGMKYL-- 163
Query: 451 ECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLG--YLAPELT 508
             +   VHRD+   NIL+++ L  K+ DFGL+++ E       T   G +   + +PE  
Sbjct: 164 -SDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 509 RTGKATTSTDVYSYGILMLEV 529
              K T+++DV+SYGI++ EV
Sbjct: 223 AYRKFTSASDVWSYGIVLWEV 243

>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361

Iteration: 1
 Score = 87.8 bits (216), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/201 (31%), Positives = 104/201 (51%), Gaps = 15/201 (7%)
Query: 336 NLVGSGGFGRVYRGLM--PSLG-LEVAIK--RIGHNSQQGMKEFVAEIMSMGRLRHRNLV 390
            +VG+G FG V  G +  PS   + VAIK  ++G+  +Q  ++F+ E   MG+  H N++
Sbjct: 39  KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASIMGQFDHPNII 97
Query: 391 QLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHE 450
           +L G   K   +++V +Y+ NGS                   Q   +L GIA  + YL  
Sbjct: 98  RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI----QLVGMLRGIASGMKYLS- 152
Query: 451 ECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLG--YLAPELT 508
             +   VHRD+   NIL+++ L  K+ DFGL+++ E       T   G +   + +PE  
Sbjct: 153 --DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 210
Query: 509 RTGKATTSTDVYSYGILMLEV 529
              K T+++DV+SYGI++ EV
Sbjct: 211 AYRKFTSASDVWSYGIVLWEV 231

>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312

Iteration: 1
 Score = 87.8 bits (216), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/204 (31%), Positives = 108/204 (52%), Gaps = 17/204 (8%)
Query: 335 QNLVGSGGFGRVYRGLMPSLG---LEVAIKRI--GHNSQQGMKEFVAEIMSMGRLRHRNL 389
           + ++G+G FG V  G +   G   + VAIK +  G+  +Q  ++F++E   MG+  H N+
Sbjct: 38  EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQ-RRDFLSEASIMGQFDHPNV 96
Query: 390 VQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLH 449
           + L G   K   ++++ +++ NGS                T  Q   +L GIA  + YL 
Sbjct: 97  IHLEGVVTKSTPVMIITEFMENGS----LDSFLRQNDGQFTVIQLVGMLRGIAAGMKYL- 151
Query: 450 EECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHG-ANPQTTHIVG---TLGYLAP 505
              +   VHRD+   NIL+++ L  K+ DFGL++  E   ++P  T  +G    + + AP
Sbjct: 152 --ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAP 209
Query: 506 ELTRTGKATTSTDVYSYGILMLEV 529
           E  +  K T+++DV+SYGI+M EV
Sbjct: 210 EAIQYRKFTSASDVWSYGIVMWEV 233

>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373

Iteration: 1
 Score = 87.8 bits (216), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/201 (31%), Positives = 104/201 (51%), Gaps = 15/201 (7%)
Query: 336 NLVGSGGFGRVYRGLM--PSLG-LEVAIK--RIGHNSQQGMKEFVAEIMSMGRLRHRNLV 390
            +VG+G FG V  G +  PS   + VAIK  ++G+  +Q  ++F+ E   MG+  H N++
Sbjct: 51  KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASIMGQFDHPNII 109
Query: 391 QLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHE 450
           +L G   K   +++V +Y+ NGS                   Q   +L GIA  + YL  
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI----QLVGMLRGIASGMKYL-- 163
Query: 451 ECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLG--YLAPELT 508
             +   VHRD+   NIL+++ L  K+ DFGL+++ E       T   G +   + +PE  
Sbjct: 164 -SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 509 RTGKATTSTDVYSYGILMLEV 529
              K T+++DV+SYGI++ EV
Sbjct: 223 AYRKFTSASDVWSYGIVLWEV 243

>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373

Iteration: 1
 Score = 87.4 bits (215), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/201 (31%), Positives = 104/201 (51%), Gaps = 15/201 (7%)
Query: 336 NLVGSGGFGRVYRGLM--PSLG-LEVAIK--RIGHNSQQGMKEFVAEIMSMGRLRHRNLV 390
            +VG+G FG V  G +  PS   + VAIK  ++G+  +Q  ++F+ E   MG+  H N++
Sbjct: 51  KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASIMGQFDHPNII 109
Query: 391 QLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHE 450
           +L G   K   +++V +Y+ NGS                   Q   +L GIA  + YL  
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI----QLVGMLRGIASGMKYL-- 163
Query: 451 ECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLG--YLAPELT 508
             +   VHRD+   NIL+++ L  K+ DFGL+++ E       T   G +   + +PE  
Sbjct: 164 -SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 509 RTGKATTSTDVYSYGILMLEV 529
              K T+++DV+SYGI++ EV
Sbjct: 223 AYRKFTSASDVWSYGIVLWEV 243

>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373

Iteration: 1
 Score = 87.4 bits (215), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/201 (31%), Positives = 104/201 (51%), Gaps = 15/201 (7%)
Query: 336 NLVGSGGFGRVYRGLM--PSLG-LEVAIK--RIGHNSQQGMKEFVAEIMSMGRLRHRNLV 390
            +VG+G FG V  G +  PS   + VAIK  ++G+  +Q  ++F+ E   MG+  H N++
Sbjct: 51  KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASIMGQFDHPNII 109
Query: 391 QLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHE 450
           +L G   K   +++V +Y+ NGS                   Q   +L GIA  + YL  
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI----QLVGMLRGIASGMKYL-- 163
Query: 451 ECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLG--YLAPELT 508
             +   VHRD+   NIL+++ L  K+ DFGL+++ E       T   G +   + +PE  
Sbjct: 164 -SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 509 RTGKATTSTDVYSYGILMLEV 529
              K T+++DV+SYGI++ EV
Sbjct: 223 AYRKFTSASDVWSYGIVLWEV 243

>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 87.4 bits (215), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 58/197 (29%), Positives = 101/197 (51%), Gaps = 12/197 (6%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNS--QQGMKEFVAEIMSMGRLRHRNLVQLHGW 395
           +G+G FG V+R      G +VA+K +       + + EF+ E+  M RLRH N+V   G 
Sbjct: 45  IGAGSFGTVHRAEW--HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGA 102
Query: 396 CRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIG--IAQSLLYLHEECN 453
             +   L +V +Y+  GS                  D+R ++ +   +A+ + YLH   N
Sbjct: 103 VTQPPNLSIVTEYLSRGSLYRLLHKSGAREQL----DERRRLSMAYDVAKGMNYLHNR-N 157
Query: 454 QRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKA 513
             +VHR++K  N+L+D     K+ DFGL+++ +      +    GT  ++APE+ R   +
Sbjct: 158 PPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL-KASTFLSSKSAAGTPEWMAPEVLRDEPS 216
Query: 514 TTSTDVYSYGILMLEVA 530
              +DVYS+G+++ E+A
Sbjct: 217 NEKSDVYSFGVILWELA 233

>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371

Iteration: 1
 Score = 87.4 bits (215), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/201 (31%), Positives = 104/201 (51%), Gaps = 15/201 (7%)
Query: 336 NLVGSGGFGRVYRGLM--PSLG-LEVAIK--RIGHNSQQGMKEFVAEIMSMGRLRHRNLV 390
            +VG+G FG V  G +  PS   + VAIK  ++G+  +Q  ++F+ E   MG+  H N++
Sbjct: 49  KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASIMGQFDHPNII 107
Query: 391 QLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHE 450
           +L G   K   +++V +Y+ NGS                   Q   +L GIA  + YL  
Sbjct: 108 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI----QLVGMLRGIASGMKYL-- 161
Query: 451 ECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLG--YLAPELT 508
             +   VHRD+   NIL+++ L  K+ DFGL+++ E       T   G +   + +PE  
Sbjct: 162 -SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 220
Query: 509 RTGKATTSTDVYSYGILMLEV 529
              K T+++DV+SYGI++ EV
Sbjct: 221 AYRKFTSASDVWSYGIVLWEV 241

>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373

Iteration: 1
 Score = 87.4 bits (215), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/201 (31%), Positives = 104/201 (51%), Gaps = 15/201 (7%)
Query: 336 NLVGSGGFGRVYRGLM--PSLG-LEVAIK--RIGHNSQQGMKEFVAEIMSMGRLRHRNLV 390
            +VG+G FG V  G +  PS   + VAIK  ++G+  +Q  ++F+ E   MG+  H N++
Sbjct: 51  KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASIMGQFDHPNII 109
Query: 391 QLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHE 450
           +L G   K   +++V +Y+ NGS                   Q   +L GIA  + YL  
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI----QLVGMLRGIASGMKYL-- 163
Query: 451 ECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLG--YLAPELT 508
             +   VHRD+   NIL+++ L  K+ DFGL+++ E       T   G +   + +PE  
Sbjct: 164 -SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 509 RTGKATTSTDVYSYGILMLEV 529
              K T+++DV+SYGI++ EV
Sbjct: 223 AYRKFTSASDVWSYGIVLWEV 243

>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373

Iteration: 1
 Score = 87.0 bits (214), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 64/201 (31%), Positives = 103/201 (51%), Gaps = 15/201 (7%)
Query: 336 NLVGSGGFGRVYRGLM--PSLG-LEVAIK--RIGHNSQQGMKEFVAEIMSMGRLRHRNLV 390
            +VG+G FG V  G +  PS   + VAIK  ++G+  +Q  ++F+ E   MG+  H N++
Sbjct: 51  KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASIMGQFDHPNII 109
Query: 391 QLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHE 450
           +L G   K   +++V +Y+ NGS                   Q   +L GIA  + YL  
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI----QLVGMLRGIASGMKYL-- 163
Query: 451 ECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLG--YLAPELT 508
             +   VHRD+   NIL+++ L  K+ DFGL ++ E       T   G +   + +PE  
Sbjct: 164 -SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 509 RTGKATTSTDVYSYGILMLEV 529
              K T+++DV+SYGI++ EV
Sbjct: 223 AYRKFTSASDVWSYGIVLWEV 243

>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7) Length = 318

Iteration: 1
 Score = 86.7 bits (213), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 63/202 (31%), Positives = 105/202 (51%), Gaps = 15/202 (7%)
Query: 335 QNLVGSGGFGRVYRGLMPSLG---LEVAIK--RIGHNSQQGMKEFVAEIMSMGRLRHRNL 389
           + ++G+G FG V  G +   G   + VAIK  ++G+  +Q  ++F+ E   MG+  H N+
Sbjct: 48  ERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQ-RRDFLCEASIMGQFDHPNV 106
Query: 390 VQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLH 449
           V L G   +   +++V +++ NG+                T  Q   +L GIA  + YL 
Sbjct: 107 VHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQF----TVIQLVGMLRGIAAGMRYL- 161
Query: 450 EECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLG--YLAPEL 507
              +   VHRD+   NIL+++ L  K+ DFGL+++ E       T   G +   + APE 
Sbjct: 162 --ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEA 219
Query: 508 TRTGKATTSTDVYSYGILMLEV 529
            +  K T+++DV+SYGI+M EV
Sbjct: 220 IQYRKFTSASDVWSYGIVMWEV 241

>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373

Iteration: 1
 Score = 85.1 bits (209), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 63/201 (31%), Positives = 103/201 (51%), Gaps = 15/201 (7%)
Query: 336 NLVGSGGFGRVYRGLM--PSLG-LEVAIK--RIGHNSQQGMKEFVAEIMSMGRLRHRNLV 390
            +VG+G FG V  G +  PS   + VAIK  ++G+  +Q  ++F+ E   MG+  H N++
Sbjct: 51  KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASIMGQFDHPNII 109
Query: 391 QLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHE 450
           +L G   K   +++V + + NGS                   Q   +L GIA  + YL  
Sbjct: 110 RLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVI----QLVGMLRGIASGMKYL-- 163
Query: 451 ECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLG--YLAPELT 508
             +   VHRD+   NIL+++ L  K+ DFGL+++ E       T   G +   + +PE  
Sbjct: 164 -SDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 509 RTGKATTSTDVYSYGILMLEV 529
              K T+++DV+SYGI++ EV
Sbjct: 223 AYRKFTSASDVWSYGIVLWEV 243

>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344

Iteration: 1
 Score = 85.1 bits (209), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 63/201 (31%), Positives = 103/201 (51%), Gaps = 15/201 (7%)
Query: 336 NLVGSGGFGRVYRGLM--PSLG-LEVAIK--RIGHNSQQGMKEFVAEIMSMGRLRHRNLV 390
            +VG+G FG V  G +  PS   + VAIK  ++G+  +Q  ++F+ E   MG+  H N++
Sbjct: 22  KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASIMGQFDHPNII 80
Query: 391 QLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHE 450
           +L G   K   +++V + + NGS                   Q   +L GIA  + YL +
Sbjct: 81  RLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVI----QLVGMLRGIASGMKYLSD 136
Query: 451 ECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLG--YLAPELT 508
                 VHRD+   NIL+++ L  K+ DFGL+++ E       T   G +   + +PE  
Sbjct: 137 ---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 193
Query: 509 RTGKATTSTDVYSYGILMLEV 529
              K T+++DV+SYGI++ EV
Sbjct: 194 AYRKFTSASDVWSYGIVLWEV 214

>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306

Iteration: 1
 Score = 85.1 bits (209), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 62/202 (30%), Positives = 102/202 (50%), Gaps = 15/202 (7%)
Query: 335 QNLVGSGGFGRVYRGLMPSLG---LEVAIK--RIGHNSQQGMKEFVAEIMSMGRLRHRNL 389
           + ++G G FG V  G +   G   + VAIK  + G+  +Q  ++F++E   MG+  H N+
Sbjct: 34  EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQ-RRDFLSEASIMGQFDHPNI 92
Query: 390 VQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLH 449
           + L G   K   ++++ +Y+ NGS                T  Q   +L GI   + YL 
Sbjct: 93  IHLEGVVTKCKPVMIITEYMENGS----LDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLS 148
Query: 450 EECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLG--YLAPEL 507
              +   VHRD+   NIL+++ L  K+ DFG++++ E       T   G +   + APE 
Sbjct: 149 ---DMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEA 205
Query: 508 TRTGKATTSTDVYSYGILMLEV 529
               K T+++DV+SYGI+M EV
Sbjct: 206 IAYRKFTSASDVWSYGIVMWEV 227

>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271

Iteration: 1
 Score = 84.7 bits (208), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 101/203 (49%), Gaps = 21/203 (10%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRI-----GHNSQQGMKEFVAEIMSMGRLRHRNLVQL 392
           +G G FG+V      + G +VA+K I       +  QG  E   EI  +  LRH ++++L
Sbjct: 12  LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLRHPHIIKL 69
Query: 393 HGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEEC 452
           +   + +DE+++V +Y  N                   + Q+      I  ++ Y H   
Sbjct: 70  YDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQ------IISAVEYCHR-- 121
Query: 453 NQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGK 512
             ++VHRD+KP N+LLD +LN K+ DFGL+ I   G   +T+   G+  Y APE+  +GK
Sbjct: 122 -HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS--CGSPNYAAPEVI-SGK 177
Query: 513 --ATTSTDVYSYGILMLEVACGR 533
             A    DV+S G+++  + C R
Sbjct: 178 LYAGPEVDVWSCGVILYVMLCRR 200

>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283

Iteration: 1
 Score = 84.7 bits (208), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 101/203 (49%), Gaps = 21/203 (10%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRI-----GHNSQQGMKEFVAEIMSMGRLRHRNLVQL 392
           +G G FG+V      + G +VA+K I       +  QG  E   EI  +  LRH ++++L
Sbjct: 22  LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLRHPHIIKL 79
Query: 393 HGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEEC 452
           +   + +DE+++V +Y  N                   + Q+      I  ++ Y H   
Sbjct: 80  YDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQ------IISAVEYCHR-- 131
Query: 453 NQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGK 512
             ++VHRD+KP N+LLD +LN K+ DFGL+ I   G   +T+   G+  Y APE+  +GK
Sbjct: 132 -HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS--CGSPNYAAPEVI-SGK 187
Query: 513 --ATTSTDVYSYGILMLEVACGR 533
             A    DV+S G+++  + C R
Sbjct: 188 LYAGPEVDVWSCGVILYVMLCRR 210

>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275

Iteration: 1
 Score = 84.7 bits (208), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 101/203 (49%), Gaps = 21/203 (10%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRI-----GHNSQQGMKEFVAEIMSMGRLRHRNLVQL 392
           +G G FG+V      + G +VA+K I       +  QG  E   EI  +  LRH ++++L
Sbjct: 21  LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLRHPHIIKL 78
Query: 393 HGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEEC 452
           +   + +DE+++V +Y  N                   + Q+      I  ++ Y H   
Sbjct: 79  YDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQ------IISAVEYCHR-- 130
Query: 453 NQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGK 512
             ++VHRD+KP N+LLD +LN K+ DFGL+ I   G   +T+   G+  Y APE+  +GK
Sbjct: 131 -HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS--CGSPNYAAPEVI-SGK 186
Query: 513 --ATTSTDVYSYGILMLEVACGR 533
             A    DV+S G+++  + C R
Sbjct: 187 LYAGPEVDVWSCGVILYVMLCRR 209

>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274

Iteration: 1
 Score = 84.7 bits (208), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 101/203 (49%), Gaps = 21/203 (10%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRI-----GHNSQQGMKEFVAEIMSMGRLRHRNLVQL 392
           +G G FG+V      + G +VA+K I       +  QG  E   EI  +  LRH ++++L
Sbjct: 16  LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLRHPHIIKL 73
Query: 393 HGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEEC 452
           +   + +DE+++V +Y  N                   + Q+      I  ++ Y H   
Sbjct: 74  YDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQ------IISAVEYCHR-- 125
Query: 453 NQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGK 512
             ++VHRD+KP N+LLD +LN K+ DFGL+ I   G   +T+   G+  Y APE+  +GK
Sbjct: 126 -HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS--CGSPNYAAPEVI-SGK 181
Query: 513 --ATTSTDVYSYGILMLEVACGR 533
             A    DV+S G+++  + C R
Sbjct: 182 LYAGPEVDVWSCGVILYVMLCRR 204

>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373

Iteration: 1
 Score = 84.3 bits (207), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 63/201 (31%), Positives = 103/201 (51%), Gaps = 15/201 (7%)
Query: 336 NLVGSGGFGRVYRGLM--PSLG-LEVAIK--RIGHNSQQGMKEFVAEIMSMGRLRHRNLV 390
            +VG+G FG V  G +  PS   + VAIK  ++G+  +Q  ++F+ E   MG+  H N++
Sbjct: 51  KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASIMGQFDHPNII 109
Query: 391 QLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHE 450
           +L G   K   +++V + + NGS                   Q   +L GIA  + YL  
Sbjct: 110 RLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVI----QLVGMLRGIASGMKYL-- 163
Query: 451 ECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLG--YLAPELT 508
             +   VHRD+   NIL+++ L  K+ DFGL+++ E       T   G +   + +PE  
Sbjct: 164 -SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 509 RTGKATTSTDVYSYGILMLEV 529
              K T+++DV+SYGI++ EV
Sbjct: 223 AYRKFTSASDVWSYGIVLWEV 243

>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In Complex With Adp Length = 286

Iteration: 1
 Score = 84.3 bits (207), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 63/204 (30%), Positives = 107/204 (52%), Gaps = 17/204 (8%)
Query: 335 QNLVGSGGFGRVYRGLMPSLG---LEVAIKRI--GHNSQQGMKEFVAEIMSMGRLRHRNL 389
           + ++G+G FG V  G +   G   + VAIK +  G+  +Q  ++F++E   MG+  H N+
Sbjct: 12  EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQ-RRDFLSEASIMGQFDHPNV 70
Query: 390 VQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLH 449
           + L G   K   ++++ +++ NGS                T  Q   +L GIA  + YL 
Sbjct: 71  IHLEGVVTKSTPVMIITEFMENGS----LDSFLRQNDGQFTVIQLVGMLRGIAAGMKYL- 125
Query: 450 EECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHG-ANPQTTHIVG---TLGYLAP 505
              +   VHR +   NIL+++ L  K+ DFGL++  E   ++P  T  +G    + + AP
Sbjct: 126 --ADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAP 183
Query: 506 ELTRTGKATTSTDVYSYGILMLEV 529
           E  +  K T+++DV+SYGI+M EV
Sbjct: 184 EAIQYRKFTSASDVWSYGIVMWEV 207

>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g Hyperactivating Mutant In Apo Form. Length = 303

Iteration: 1
 Score = 84.3 bits (207), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 102/225 (45%), Gaps = 35/225 (15%)
Query: 332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRH----- 386
           F E  ++G G FG+V +          AIK+I H +++ +   ++E+M +  L H     
Sbjct: 8   FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRH-TEEKLSTILSEVMLLASLNHQYVVR 66
Query: 387 --------RNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKIL 438
                   RN V+     +K+  L +  +Y  NG+                  D+ +++ 
Sbjct: 67  YYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQR----DEYWRLF 122
Query: 439 IGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEH----------- 487
             I ++L Y+H   +Q ++HRD+KP NI +D   N K+GDFGLAK               
Sbjct: 123 RQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQN 179
Query: 488 --GANPQTTHIVGTLGYLAPE-LTRTGKATTSTDVYSYGILMLEV 529
             G++   T  +GT  Y+A E L  TG      D+YS GI+  E+
Sbjct: 180 LPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM 224

>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf 12058 Length = 285

Iteration: 1
 Score = 84.3 bits (207), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 62/202 (30%), Positives = 102/202 (50%), Gaps = 15/202 (7%)
Query: 335 QNLVGSGGFGRVYRGLMPSLG---LEVAIK--RIGHNSQQGMKEFVAEIMSMGRLRHRNL 389
           + ++G G FG V  G +   G   + VAIK  + G+  +Q  ++F++E   MG+  H N+
Sbjct: 13  EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQ-RRDFLSEASIMGQFDHPNI 71
Query: 390 VQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLH 449
           + L G   K   ++++ +Y+ NGS                T  Q   +L GI   + YL 
Sbjct: 72  IHLEGVVTKCKPVMIITEYMENGS----LDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLS 127
Query: 450 EECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLG--YLAPEL 507
              +   VHRD+   NIL+++ L  K+ DFG++++ E       T   G +   + APE 
Sbjct: 128 ---DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEA 184
Query: 508 TRTGKATTSTDVYSYGILMLEV 529
               K T+++DV+SYGI+M EV
Sbjct: 185 IAYRKFTSASDVWSYGIVMWEV 206

>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain Length = 291

Iteration: 1
 Score = 84.3 bits (207), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 62/202 (30%), Positives = 102/202 (50%), Gaps = 15/202 (7%)
Query: 335 QNLVGSGGFGRVYRGLMPSLG---LEVAIK--RIGHNSQQGMKEFVAEIMSMGRLRHRNL 389
           + ++G G FG V  G +   G   + VAIK  + G+  +Q  ++F++E   MG+  H N+
Sbjct: 19  EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQ-RRDFLSEASIMGQFDHPNI 77
Query: 390 VQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLH 449
           + L G   K   ++++ +Y+ NGS                T  Q   +L GI   + YL 
Sbjct: 78  IHLEGVVTKCKPVMIITEYMENGS----LDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLS 133
Query: 450 EECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLG--YLAPEL 507
              +   VHRD+   NIL+++ L  K+ DFG++++ E       T   G +   + APE 
Sbjct: 134 ---DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEA 190
Query: 508 TRTGKATTSTDVYSYGILMLEV 529
               K T+++DV+SYGI+M EV
Sbjct: 191 IAYRKFTSASDVWSYGIVMWEV 212

>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269

Iteration: 1
 Score = 83.6 bits (205), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 66/216 (30%), Positives = 101/216 (46%), Gaps = 13/216 (6%)
Query: 333 GEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQL 392
           G++ ++G G +G VY G   S  + +AIK I     +  +    EI     L+H+N+VQ 
Sbjct: 11  GDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQY 70
Query: 393 HGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEEC 452
            G   +   + +  + VP GS                     Y     I + L YLH   
Sbjct: 71  LGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQ--ILEGLKYLH--- 125
Query: 453 NQRVVHRDVKPSNILLDTYLNA-KLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTG 511
           + ++VHRD+K  N+L++TY    K+ DFG +K    G NP T    GTL Y+APE+   G
Sbjct: 126 DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLA-GINPCTETFTGTLQYMAPEIIDKG 184
Query: 512 KA--TTSTDVYSYGILMLEVACGRRSI----EPQKA 541
                 + D++S G  ++E+A G+       EPQ A
Sbjct: 185 PRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAA 220

>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295

Iteration: 1
 Score = 83.2 bits (204), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 66/216 (30%), Positives = 101/216 (46%), Gaps = 13/216 (6%)
Query: 333 GEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQL 392
           G++ ++G G +G VY G   S  + +AIK I     +  +    EI     L+H+N+VQ 
Sbjct: 25  GDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQY 84
Query: 393 HGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEEC 452
            G   +   + +  + VP GS                     Y     I + L YLH   
Sbjct: 85  LGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFY--TKQILEGLKYLH--- 139
Query: 453 NQRVVHRDVKPSNILLDTYLNA-KLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTG 511
           + ++VHRD+K  N+L++TY    K+ DFG +K    G NP T    GTL Y+APE+   G
Sbjct: 140 DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLA-GINPCTETFTGTLQYMAPEIIDKG 198
Query: 512 KA--TTSTDVYSYGILMLEVACGRRSI----EPQKA 541
                 + D++S G  ++E+A G+       EPQ A
Sbjct: 199 PRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAA 234

>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta Length = 676

Iteration: 1
 Score = 82.8 bits (203), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 70/211 (33%), Positives = 96/211 (45%), Gaps = 17/211 (8%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHN-SQQGMKEFVAEIMSMGRLRHRNLV---QLH 393
           +G+GGFG V R +    G +VAIK+     S +  + +  EI  M +L H N+V   ++ 
Sbjct: 22  LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 81
Query: 394 GWCRK---QDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHE 450
              +K    D  LL  +Y   G                        +L  I+ +L YLHE
Sbjct: 82  DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKE--GPIRTLLSDISSALRYLHE 139
Query: 451 ECNQRVVHRDVKPSNILLD---TYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
               R++HRD+KP NI+L      L  K+ D G AK  + G     T  VGTL YLAPEL
Sbjct: 140 ---NRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE--LCTEFVGTLQYLAPEL 194
Query: 508 TRTGKATTSTDVYSYGILMLEVACGRRSIEP 538
               K T + D +S+G L  E   G R   P
Sbjct: 195 LEQKKYTVTVDYWSFGTLAFECITGFRPFLP 225

>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta (I4122) Length = 677

Iteration: 1
 Score = 82.8 bits (203), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 70/211 (33%), Positives = 96/211 (45%), Gaps = 17/211 (8%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHN-SQQGMKEFVAEIMSMGRLRHRNLV---QLH 393
           +G+GGFG V R +    G +VAIK+     S +  + +  EI  M +L H N+V   ++ 
Sbjct: 23  LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 82
Query: 394 GWCRK---QDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHE 450
              +K    D  LL  +Y   G                        +L  I+ +L YLHE
Sbjct: 83  DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKE--GPIRTLLSDISSALRYLHE 140
Query: 451 ECNQRVVHRDVKPSNILLD---TYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
               R++HRD+KP NI+L      L  K+ D G AK  + G     T  VGTL YLAPEL
Sbjct: 141 ---NRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE--LCTEFVGTLQYLAPEL 195
Query: 508 TRTGKATTSTDVYSYGILMLEVACGRRSIEP 538
               K T + D +S+G L  E   G R   P
Sbjct: 196 LEQKKYTVTVDYWSFGTLAFECITGFRPFLP 226

>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314

Iteration: 1
 Score = 82.0 bits (201), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 70/232 (30%), Positives = 113/232 (48%), Gaps = 19/232 (8%)
Query: 318 RRFKYAELASVTKG----FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKE 373
           R+ K  +  S+TK     F     +G G +G VY+ +    G  VAIK++   S   ++E
Sbjct: 13  RQLKKLDEDSLTKQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESD--LQE 70
Query: 374 FVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQ 433
            + EI  M +    ++V+ +G   K  +L +V +Y   GS                T D+
Sbjct: 71  IIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTL----TEDE 126
Query: 434 RYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLA-KIYEHGANPQ 492
              IL    + L YLH     R +HRD+K  NILL+T  +AKL DFG+A ++ +  A  +
Sbjct: 127 IATILQSTLKGLEYLH---FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMA--K 181
Query: 493 TTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGR---RSIEPQKA 541
              ++GT  ++APE+ +        D++S GI  +E+A G+     I P +A
Sbjct: 182 RNXVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRA 233

>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303

Iteration: 1
 Score = 82.0 bits (201), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 100/207 (48%), Gaps = 29/207 (14%)
Query: 338 VGSGGFGRV----YRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLH 393
           +G G FG V    Y  L  + G  VA+K++ H++++ +++F  EI  +  L+H N+V+  
Sbjct: 22  LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 81
Query: 394 GWCRK--QDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEE 451
           G C    +  L L+ +Y+P GS                 + Q++K  I   + L Y  + 
Sbjct: 82  GVCYSAGRRNLKLIMEYLPYGS--------------LRDYLQKHKERIDHIKLLQYTSQI 127
Query: 452 CN-------QRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGT--LGY 502
           C        +R +HRD+   NIL++     K+GDFGL K+             G   + +
Sbjct: 128 CKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 187
Query: 503 LAPELTRTGKATTSTDVYSYGILMLEV 529
            APE     K + ++DV+S+G+++ E+
Sbjct: 188 YAPESLTESKFSVASDVWSFGVVLYEL 214

>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300

Iteration: 1
 Score = 82.0 bits (201), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 100/207 (48%), Gaps = 29/207 (14%)
Query: 338 VGSGGFGRV----YRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLH 393
           +G G FG V    Y  L  + G  VA+K++ H++++ +++F  EI  +  L+H N+V+  
Sbjct: 23  LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 82
Query: 394 GWCRK--QDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEE 451
           G C    +  L L+ +Y+P GS                 + Q++K  I   + L Y  + 
Sbjct: 83  GVCYSAGRRNLKLIMEYLPYGS--------------LRDYLQKHKERIDHIKLLQYTSQI 128
Query: 452 CN-------QRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGT--LGY 502
           C        +R +HRD+   NIL++     K+GDFGL K+             G   + +
Sbjct: 129 CKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 188
Query: 503 LAPELTRTGKATTSTDVYSYGILMLEV 529
            APE     K + ++DV+S+G+++ E+
Sbjct: 189 YAPESLTESKFSVASDVWSFGVVLYEL 215

>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293

Iteration: 1
 Score = 81.6 bits (200), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 100/207 (48%), Gaps = 29/207 (14%)
Query: 338 VGSGGFGRV----YRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLH 393
           +G G FG V    Y  L  + G  VA+K++ H++++ +++F  EI  +  L+H N+V+  
Sbjct: 17  LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 76
Query: 394 GWCRK--QDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEE 451
           G C    +  L L+ +Y+P GS                 + Q++K  I   + L Y  + 
Sbjct: 77  GVCYSAGRRNLKLIMEYLPYGS--------------LRDYLQKHKERIDHIKLLQYTSQI 122
Query: 452 CN-------QRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGT--LGY 502
           C        +R +HRD+   NIL++     K+GDFGL K+             G   + +
Sbjct: 123 CKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 182
Query: 503 LAPELTRTGKATTSTDVYSYGILMLEV 529
            APE     K + ++DV+S+G+++ E+
Sbjct: 183 YAPESLTESKFSVASDVWSFGVVLYEL 209

>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326

Iteration: 1
 Score = 81.6 bits (200), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 100/207 (48%), Gaps = 29/207 (14%)
Query: 338 VGSGGFGRV----YRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLH 393
           +G G FG V    Y  L  + G  VA+K++ H++++ +++F  EI  +  L+H N+V+  
Sbjct: 49  LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 108
Query: 394 GWCRK--QDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEE 451
           G C    +  L L+ +Y+P GS                 + Q++K  I   + L Y  + 
Sbjct: 109 GVCYSAGRRNLKLIMEYLPYGS--------------LRDYLQKHKERIDHIKLLQYTSQI 154
Query: 452 CN-------QRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGT--LGY 502
           C        +R +HRD+   NIL++     K+GDFGL K+             G   + +
Sbjct: 155 CKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 214
Query: 503 LAPELTRTGKATTSTDVYSYGILMLEV 529
            APE     K + ++DV+S+G+++ E+
Sbjct: 215 YAPESLTESKFSVASDVWSFGVVLYEL 241

>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301

Iteration: 1
 Score = 81.6 bits (200), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 100/207 (48%), Gaps = 29/207 (14%)
Query: 338 VGSGGFGRV----YRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLH 393
           +G G FG V    Y  L  + G  VA+K++ H++++ +++F  EI  +  L+H N+V+  
Sbjct: 18  LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 394 GWCRK--QDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEE 451
           G C    +  L L+ +Y+P GS                 + Q++K  I   + L Y  + 
Sbjct: 78  GVCYSAGRRNLKLIMEYLPYGS--------------LRDYLQKHKERIDHIKLLQYTSQI 123
Query: 452 CN-------QRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGT--LGY 502
           C        +R +HRD+   NIL++     K+GDFGL K+             G   + +
Sbjct: 124 CKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 183
Query: 503 LAPELTRTGKATTSTDVYSYGILMLEV 529
            APE     K + ++DV+S+G+++ E+
Sbjct: 184 YAPESLTESKFSVASDVWSFGVVLYEL 210

>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301

Iteration: 1
 Score = 81.6 bits (200), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 100/207 (48%), Gaps = 29/207 (14%)
Query: 338 VGSGGFGRV----YRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLH 393
           +G G FG V    Y  L  + G  VA+K++ H++++ +++F  EI  +  L+H N+V+  
Sbjct: 24  LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 83
Query: 394 GWCRK--QDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEE 451
           G C    +  L L+ +Y+P GS                 + Q++K  I   + L Y  + 
Sbjct: 84  GVCYSAGRRNLKLIMEYLPYGS--------------LRDYLQKHKERIDHIKLLQYTSQI 129
Query: 452 CN-------QRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGT--LGY 502
           C        +R +HRD+   NIL++     K+GDFGL K+             G   + +
Sbjct: 130 CKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 189
Query: 503 LAPELTRTGKATTSTDVYSYGILMLEV 529
            APE     K + ++DV+S+G+++ E+
Sbjct: 190 YAPESLTESKFSVASDVWSFGVVLYEL 216

>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293

Iteration: 1
 Score = 81.6 bits (200), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 100/207 (48%), Gaps = 29/207 (14%)
Query: 338 VGSGGFGRV----YRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLH 393
           +G G FG V    Y  L  + G  VA+K++ H++++ +++F  EI  +  L+H N+V+  
Sbjct: 16  LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 75
Query: 394 GWCRK--QDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEE 451
           G C    +  L L+ +Y+P GS                 + Q++K  I   + L Y  + 
Sbjct: 76  GVCYSAGRRNLKLIMEYLPYGS--------------LRDYLQKHKERIDHIKLLQYTSQI 121
Query: 452 CN-------QRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGT--LGY 502
           C        +R +HRD+   NIL++     K+GDFGL K+             G   + +
Sbjct: 122 CKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 181
Query: 503 LAPELTRTGKATTSTDVYSYGILMLEV 529
            APE     K + ++DV+S+G+++ E+
Sbjct: 182 YAPESLTESKFSVASDVWSFGVVLYEL 208

>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298

Iteration: 1
 Score = 81.6 bits (200), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 100/207 (48%), Gaps = 29/207 (14%)
Query: 338 VGSGGFGRV----YRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLH 393
           +G G FG V    Y  L  + G  VA+K++ H++++ +++F  EI  +  L+H N+V+  
Sbjct: 21  LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 394 GWCRK--QDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEE 451
           G C    +  L L+ +Y+P GS                 + Q++K  I   + L Y  + 
Sbjct: 81  GVCYSAGRRNLKLIMEYLPYGS--------------LRDYLQKHKERIDHIKLLQYTSQI 126
Query: 452 CN-------QRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGT--LGY 502
           C        +R +HRD+   NIL++     K+GDFGL K+             G   + +
Sbjct: 127 CKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 186
Query: 503 LAPELTRTGKATTSTDVYSYGILMLEV 529
            APE     K + ++DV+S+G+++ E+
Sbjct: 187 YAPESLTESKFSVASDVWSFGVVLYEL 213

>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295

Iteration: 1
 Score = 81.6 bits (200), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 100/207 (48%), Gaps = 29/207 (14%)
Query: 338 VGSGGFGRV----YRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLH 393
           +G G FG V    Y  L  + G  VA+K++ H++++ +++F  EI  +  L+H N+V+  
Sbjct: 18  LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 394 GWCRK--QDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEE 451
           G C    +  L L+ +Y+P GS                 + Q++K  I   + L Y  + 
Sbjct: 78  GVCYSAGRRNLKLIMEYLPYGS--------------LRDYLQKHKERIDHIKLLQYTSQI 123
Query: 452 CN-------QRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGT--LGY 502
           C        +R +HRD+   NIL++     K+GDFGL K+             G   + +
Sbjct: 124 CKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 183
Query: 503 LAPELTRTGKATTSTDVYSYGILMLEV 529
            APE     K + ++DV+S+G+++ E+
Sbjct: 184 YAPESLTESKFSVASDVWSFGVVLYEL 210

>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 81.6 bits (200), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 100/207 (48%), Gaps = 29/207 (14%)
Query: 338 VGSGGFGRV----YRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLH 393
           +G G FG V    Y  L  + G  VA+K++ H++++ +++F  EI  +  L+H N+V+  
Sbjct: 25  LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 84
Query: 394 GWCRK--QDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEE 451
           G C    +  L L+ +Y+P GS                 + Q++K  I   + L Y  + 
Sbjct: 85  GVCYSAGRRNLKLIMEYLPYGS--------------LRDYLQKHKERIDHIKLLQYTSQI 130
Query: 452 CN-------QRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGT--LGY 502
           C        +R +HRD+   NIL++     K+GDFGL K+             G   + +
Sbjct: 131 CKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 190
Query: 503 LAPELTRTGKATTSTDVYSYGILMLEV 529
            APE     K + ++DV+S+G+++ E+
Sbjct: 191 YAPESLTESKFSVASDVWSFGVVLYEL 217

>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild- Type In Apo Form. Length = 303

Iteration: 1
 Score = 81.3 bits (199), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 99/225 (44%), Gaps = 35/225 (15%)
Query: 332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRH----- 386
           F E  ++G G FG+V +          AIK+I H +++ +   ++E+M +  L H     
Sbjct: 8   FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRH-TEEKLSTILSEVMLLASLNHQYVVR 66
Query: 387 --------RNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKIL 438
                   RN V+     +K+  L +  +Y  N +                 W    ++ 
Sbjct: 67  YYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYW----RLF 122
Query: 439 IGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEH----------- 487
             I ++L Y+H   +Q ++HRD+KP NI +D   N K+GDFGLAK               
Sbjct: 123 RQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQN 179
Query: 488 --GANPQTTHIVGTLGYLAPE-LTRTGKATTSTDVYSYGILMLEV 529
             G++   T  +GT  Y+A E L  TG      D+YS GI+  E+
Sbjct: 180 LPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM 224

>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311

Iteration: 1
 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 100/207 (48%), Gaps = 29/207 (14%)
Query: 338 VGSGGFGRV----YRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLH 393
           +G G FG V    Y  L  + G  VA+K++ H++++ +++F  EI  +  L+H N+V+  
Sbjct: 36  LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 394 GWCRK--QDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEE 451
           G C    +  L L+ +Y+P GS                 + Q++K  I   + L Y  + 
Sbjct: 96  GVCYSAGRRNLKLIMEYLPYGS--------------LRDYLQKHKERIDHIKLLQYTSQI 141
Query: 452 CN-------QRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGT--LGY 502
           C        +R +HRD+   NIL++     K+GDFGL K+             G   + +
Sbjct: 142 CKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 201
Query: 503 LAPELTRTGKATTSTDVYSYGILMLEV 529
            APE     K + ++DV+S+G+++ E+
Sbjct: 202 YAPESLTESKFSVASDVWSFGVVLYEL 228

>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313

Iteration: 1
 Score = 80.9 bits (198), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 100/207 (48%), Gaps = 29/207 (14%)
Query: 338 VGSGGFGRV----YRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLH 393
           +G G FG V    Y  L  + G  VA+K++ H++++ +++F  EI  +  L+H N+V+  
Sbjct: 36  LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 394 GWCRK--QDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEE 451
           G C    +  L L+ +Y+P GS                 + Q++K  I   + L Y  + 
Sbjct: 96  GVCYSAGRRNLKLIMEYLPYGS--------------LRDYLQKHKERIDHIKLLQYTSQI 141
Query: 452 CN-------QRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGT--LGY 502
           C        +R +HRD+   NIL++     K+GDFGL K+             G   + +
Sbjct: 142 CKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 201
Query: 503 LAPELTRTGKATTSTDVYSYGILMLEV 529
            APE     K + ++DV+S+G+++ E+
Sbjct: 202 YAPESLTESKFSVASDVWSFGVVLYEL 228

>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298

Iteration: 1
 Score = 80.5 bits (197), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 100/207 (48%), Gaps = 29/207 (14%)
Query: 338 VGSGGFGRV----YRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLH 393
           +G G FG V    Y  L  + G  VA+K++ H++++ +++F  EI  +  L+H N+V+  
Sbjct: 21  LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 394 GWCRK--QDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEE 451
           G C    +  L L+ +++P GS                 + Q++K  I   + L Y  + 
Sbjct: 81  GVCYSAGRRNLKLIMEFLPYGS--------------LREYLQKHKERIDHIKLLQYTSQI 126
Query: 452 CN-------QRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGT--LGY 502
           C        +R +HRD+   NIL++     K+GDFGL K+             G   + +
Sbjct: 127 CKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 186
Query: 503 LAPELTRTGKATTSTDVYSYGILMLEV 529
            APE     K + ++DV+S+G+++ E+
Sbjct: 187 YAPESLTESKFSVASDVWSFGVVLYEL 213

>pdb|3USU|B Chain B, Crystal Structure Of Butea Monosperma Seed Lectin Length = 242

Iteration: 1
 Score = 80.1 bits (196), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 73/252 (28%), Positives = 113/252 (44%), Gaps = 31/252 (12%)
Query: 7   DTTSFLYNGFL--HANLSLEGAAYISTSGILTVTNKSEG------LIGHALYPNPLRFKT 58
           +T SF ++ F     NL  +G A +++SG L +T   +        +G ALY +P+    
Sbjct: 3   NTDSFTFSKFKPNQPNLKKQGDATVTSSGTLQLTKVDKNGVPDPKSLGRALYASPINIWD 62
Query: 59  SNKSVAIDFRTNFVFSILPKYPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTK 118
           S   V   F T+F F+I          GLAF +   + P    A  FLGL +  + +S  
Sbjct: 63  SKTGVVASFATSFRFTIYAPNIATIADGLAFFLAPVSSPPKAGAG-FLGLFDSAVFNS-- 119
Query: 119 FSTRMLAVEFDIIQNTELIDINDNHVGIDXXXXXXXXXXXXXYYSGNNHRIPILLRSGDP 178
            S + +AVEFD  +NT  +D  D H+GID                     +   L +G+ 
Sbjct: 120 -SYQTVAVEFDTYENTVFLDPPDTHIGIDVNSIKSI------------KTVKWDLANGEA 166
Query: 179 IQAWVDYSSQEMLINVSICPLGVPKPYRPLI-SLPIDLSSVIDEYMYTGFSASTGLITA- 236
            +  + Y S   L+   +  L  P      I S  +DL SV+ E++  GFSA+TG  +  
Sbjct: 167 AKVLITYDSSAKLL---VAALVYPSSKTSFILSDVVDLKSVLPEWVSIGFSAATGASSGY 223
Query: 237 --SHNVHGWSIS 246
             +H+V  WS +
Sbjct: 224 IETHDVFSWSFA 235

>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295

Iteration: 1
 Score = 79.7 bits (195), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 100/207 (48%), Gaps = 29/207 (14%)
Query: 338 VGSGGFGRV----YRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLH 393
           +G G FG V    Y  L  + G  VA+K++ H++++ +++F  EI  +  L+H N+V+  
Sbjct: 18  LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 394 GWCRK--QDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEE 451
           G C    +  L L+ +Y+P GS                 + Q++K  I   + L Y  + 
Sbjct: 78  GVCYSAGRRNLKLIMEYLPYGS--------------LRDYLQKHKERIDHIKLLQYTSQI 123
Query: 452 CN-------QRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGT--LGY 502
           C        +R +HRD+   NIL++     K+GDFGL K+             G   + +
Sbjct: 124 CKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFW 183
Query: 503 LAPELTRTGKATTSTDVYSYGILMLEV 529
            APE     K + ++DV+S+G+++ E+
Sbjct: 184 YAPESLTESKFSVASDVWSFGVVLYEL 210

>pdb|3USU|A Chain A, Crystal Structure Of Butea Monosperma Seed Lectin Length = 256

Iteration: 1
 Score = 79.7 bits (195), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 73/252 (28%), Positives = 113/252 (44%), Gaps = 31/252 (12%)
Query: 7   DTTSFLYNGFL--HANLSLEGAAYISTSGILTVTNKSEG------LIGHALYPNPLRFKT 58
           +T SF ++ F     NL  +G A +++SG L +T   +        +G ALY +P+    
Sbjct: 3   NTDSFTFSKFKPNQPNLKKQGDATVTSSGTLQLTKVDKNGVPDPKSLGRALYASPINIWD 62
Query: 59  SNKSVAIDFRTNFVFSILPKYPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTK 118
           S   V   F T+F F+I          GLAF +   + P    A  FLGL +  + +S  
Sbjct: 63  SKTGVVASFATSFRFTIYAPNIATIADGLAFFLAPVSSPPKAGAG-FLGLFDSAVFNS-- 119
Query: 119 FSTRMLAVEFDIIQNTELIDINDNHVGIDXXXXXXXXXXXXXYYSGNNHRIPILLRSGDP 178
            S + +AVEFD  +NT  +D  D H+GID                     +   L +G+ 
Sbjct: 120 -SYQTVAVEFDTYENTVFLDPPDTHIGIDVNSIKSI------------KTVKWDLANGEA 166
Query: 179 IQAWVDYSSQEMLINVSICPLGVPKPYRPLI-SLPIDLSSVIDEYMYTGFSASTGLITA- 236
            +  + Y S   L+   +  L  P      I S  +DL SV+ E++  GFSA+TG  +  
Sbjct: 167 AKVLITYDSSAKLL---VAALVYPSSKTSFILSDVVDLKSVLPEWVSIGFSAATGASSGY 223
Query: 237 --SHNVHGWSIS 246
             +H+V  WS +
Sbjct: 224 IETHDVFSWSFA 235

>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315

Iteration: 1
 Score = 79.7 bits (195), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 69/272 (25%), Positives = 121/272 (44%), Gaps = 32/272 (11%)
Query: 335 QNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHG 394
           + +VG G FG V +        +VAIK+I   S++  K F+ E+  + R+ H N+V+L+G
Sbjct: 14  EEVVGRGAFGVVCKAKW--RAKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYG 69
Query: 395 WCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQ 454
            C   + + LV +Y   GS                     +   +  +Q + YLH    +
Sbjct: 70  ACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW--CLQCSQGVAYLHSMQPK 125
Query: 455 RVVHRDVKPSNILL---DTYLNAKLGDFGLA-KIYEHGANPQTTHIVGTLGYLAPELTRT 510
            ++HRD+KP N+LL    T L  K+ DFG A  I  H  N +     G+  ++APE+   
Sbjct: 126 ALIHRDLKPPNLLLVAGGTVL--KICDFGTACDIQTHMTNNK-----GSAAWMAPEVFEG 178
Query: 511 GKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDY 570
              +   DV+S+GI++ EV   R+  +  +       + W         + + + + ++ 
Sbjct: 179 SNYSEKCDVFSWGIILWEVITRRKPFD--EIGGPAFRIMWAVHNGTRPPLIKNLPKPIE- 235
Query: 571 YDLAEAELVLNLGLFCSAPNPVYRPDMRRVVE 602
                     +L   C + +P  RP M  +V+
Sbjct: 236 ----------SLMTRCWSKDPSQRPSMEEIVK 257

>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307

Iteration: 1
 Score = 79.7 bits (195), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 69/272 (25%), Positives = 121/272 (44%), Gaps = 32/272 (11%)
Query: 335 QNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHG 394
           + +VG G FG V +        +VAIK+I   S++  K F+ E+  + R+ H N+V+L+G
Sbjct: 13  EEVVGRGAFGVVCKAKW--RAKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYG 68
Query: 395 WCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQ 454
            C   + + LV +Y   GS                     +   +  +Q + YLH    +
Sbjct: 69  ACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW--CLQCSQGVAYLHSMQPK 124
Query: 455 RVVHRDVKPSNILL---DTYLNAKLGDFGLA-KIYEHGANPQTTHIVGTLGYLAPELTRT 510
            ++HRD+KP N+LL    T L  K+ DFG A  I  H  N +     G+  ++APE+   
Sbjct: 125 ALIHRDLKPPNLLLVAGGTVL--KICDFGTACDIQTHMTNNK-----GSAAWMAPEVFEG 177
Query: 511 GKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDY 570
              +   DV+S+GI++ EV   R+  +  +       + W         + + + + ++ 
Sbjct: 178 SNYSEKCDVFSWGIILWEVITRRKPFD--EIGGPAFRIMWAVHNGTRPPLIKNLPKPIE- 234
Query: 571 YDLAEAELVLNLGLFCSAPNPVYRPDMRRVVE 602
                     +L   C + +P  RP M  +V+
Sbjct: 235 ----------SLMTRCWSKDPSQRPSMEEIVK 256

>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278

Iteration: 1
 Score = 79.7 bits (195), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 68/247 (27%), Positives = 111/247 (44%), Gaps = 18/247 (7%)
Query: 330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS--QQGMKEFVA-EIMSMGRLRH 386
           + F   NL+G G F  VYR      GLEVAIK I   +  + GM + V  E+    +L+H
Sbjct: 11  EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKH 70
Query: 387 RNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLL 446
            ++++L+ +    + + LV +   NG                      ++I+ G    +L
Sbjct: 71  PSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITG----ML 126
Query: 447 YLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTH--IVGTLGYLA 504
           YLH   +  ++HRD+  SN+LL   +N K+ DFGLA   +    P   H  + GT  Y++
Sbjct: 127 YLH---SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKM---PHEKHYTLCGTPNYIS 180
Query: 505 PELTRTGKATTSTDVYSYGILMLEVACGRRSIEP---QKAAAELLLVDWVKELHLEGEIT 561
           PE+         +DV+S G +   +  GR   +    +    +++L D+     L  E  
Sbjct: 181 PEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPSFLSIEAK 240
Query: 562 QAIDQTL 568
             I Q L
Sbjct: 241 DLIHQLL 247

>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280

Iteration: 1
 Score = 79.3 bits (194), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 16/204 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRI--GHNSQQGMK-EFVAEIMSMGRLRHRNLVQLHG 394
           +G G FG VY          +A+K +      + G++ +   E+     LRH N+++L+G
Sbjct: 16  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 395 WCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIG-IAQSLLYLHEECN 453
           +      + L+ +Y P G+                  +QR    I  +A +L Y H   +
Sbjct: 76  YFHDATRVYLILEYAPLGTVYRELQKLSKFD------EQRTATYITELANALSYCH---S 126
Query: 454 QRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKA 513
           +RV+HRD+KP N+LL +    K+ DFG +    H  + + T + GTL YL PE+      
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTELCGTLDYLPPEMIEGRMH 183
Query: 514 TTSTDVYSYGILMLEVACGRRSIE 537
               D++S G+L  E   G+   E
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFE 207

>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285

Iteration: 1
 Score = 79.3 bits (194), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 93/204 (45%), Gaps = 16/204 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRI--GHNSQQGMK-EFVAEIMSMGRLRHRNLVQLHG 394
           +G G FG VY          +A+K +      + G++ +   E+     LRH N+++L+G
Sbjct: 21  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 395 WCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIG-IAQSLLYLHEECN 453
           +      + L+ +Y P G                   +QR    I  +A +L Y H   +
Sbjct: 81  YFHDATRVYLILEYAPRGEVYKELQKLSKFD------EQRTATYITELANALSYCH---S 131
Query: 454 QRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKA 513
           +RV+HRD+KP N+LL +    K+ DFG +    H  + + T + GTL YL PE+      
Sbjct: 132 KRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYLPPEMIEGRMH 188
Query: 514 TTSTDVYSYGILMLEVACGRRSIE 537
               D++S G+L  E   G+   E
Sbjct: 189 DEKVDLWSLGVLCYEFLVGKPPFE 212

>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287

Iteration: 1
 Score = 79.0 bits (193), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 16/204 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRI--GHNSQQGMK-EFVAEIMSMGRLRHRNLVQLHG 394
           +G G FG VY          +A+K +      + G++ +   E+     LRH N+++L+G
Sbjct: 16  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 395 WCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIG-IAQSLLYLHEECN 453
           +      + L+ +Y P G+                  +QR    I  +A +L Y H   +
Sbjct: 76  YFHDATRVYLILEYAPLGTVYRELQKLSKFD------EQRTATYITELANALSYCH---S 126
Query: 454 QRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKA 513
           +RV+HRD+KP N+LL +    K+ DFG +    H  + + T + GTL YL PE+      
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTDLCGTLDYLPPEMIEGRMH 183
Query: 514 TTSTDVYSYGILMLEVACGRRSIE 537
               D++S G+L  E   G+   E
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFE 207

>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275

Iteration: 1
 Score = 79.0 bits (193), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 16/204 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRI--GHNSQQGMK-EFVAEIMSMGRLRHRNLVQLHG 394
           +G G FG VY          +A+K +      + G++ +   E+     LRH N+++L+G
Sbjct: 16  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 395 WCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIG-IAQSLLYLHEECN 453
           +      + L+ +Y P G+                  +QR    I  +A +L Y H   +
Sbjct: 76  YFHDATRVYLILEYAPLGTVYRELQKLSKFD------EQRTATYITELANALSYCH---S 126
Query: 454 QRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKA 513
           +RV+HRD+KP N+LL +    K+ DFG +    H  + + T + GTL YL PE+      
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTDLCGTLDYLPPEMIEGRMH 183
Query: 514 TTSTDVYSYGILMLEVACGRRSIE 537
               D++S G+L  E   G+   E
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFE 207

>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279

Iteration: 1
 Score = 79.0 bits (193), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 16/204 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRI--GHNSQQGMK-EFVAEIMSMGRLRHRNLVQLHG 394
           +G G FG VY          +A+K +      + G++ +   E+     LRH N+++L+G
Sbjct: 17  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 395 WCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIG-IAQSLLYLHEECN 453
           +      + L+ +Y P G+                  +QR    I  +A +L Y H   +
Sbjct: 77  YFHDATRVYLILEYAPLGTVYRELQKLSKFD------EQRTATYITELANALSYCH---S 127
Query: 454 QRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKA 513
           +RV+HRD+KP N+LL +    K+ DFG +    H  + + T + GTL YL PE+      
Sbjct: 128 KRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTDLCGTLDYLPPEMIEGRMH 184
Query: 514 TTSTDVYSYGILMLEVACGRRSIE 537
               D++S G+L  E   G+   E
Sbjct: 185 DEKVDLWSLGVLCYEFLVGKPPFE 208

>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307

Iteration: 1
 Score = 79.0 bits (193), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 93/199 (46%), Gaps = 13/199 (6%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +GSG FG VY+G      + V I ++   + +  + F  E+  + + RH N++   G+  
Sbjct: 44  IGSGSFGTVYKGKWHG-DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT 102
Query: 398 KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQRVV 457
           K D L +V  +    S                  D    I    AQ + YLH    + ++
Sbjct: 103 K-DNLAIVTQWCEGSSLYKHLHVQETKFQMFQLID----IARQTAQGMDYLHA---KNII 154
Query: 458 HRDVKPSNILLDTYLNAKLGDFGLAKIYEH-GANPQTTHIVGTLGYLAPELTR---TGKA 513
           HRD+K +NI L   L  K+GDFGLA +      + Q     G++ ++APE+ R       
Sbjct: 155 HRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPF 214
Query: 514 TTSTDVYSYGILMLEVACG 532
           +  +DVYSYGI++ E+  G
Sbjct: 215 SFQSDVYSYGIVLYELMTG 233

>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268

Iteration: 1
 Score = 78.6 bits (192), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 16/204 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRI--GHNSQQGMK-EFVAEIMSMGRLRHRNLVQLHG 394
           +G G FG VY          +A+K +      + G++ +   E+     LRH N+++L+G
Sbjct: 16  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 395 WCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIG-IAQSLLYLHEECN 453
           +      + L+ +Y P G+                  +QR    I  +A +L Y H   +
Sbjct: 76  YFHDATRVYLILEYAPLGTVYRELQKLSKFD------EQRTATYITELANALSYCH---S 126
Query: 454 QRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKA 513
           +RV+HRD+KP N+LL +    K+ DFG +    H  + + T + GTL YL PE+      
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTXLCGTLDYLPPEMIEGRMH 183
Query: 514 TTSTDVYSYGILMLEVACGRRSIE 537
               D++S G+L  E   G+   E
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFE 207

>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 16/204 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRI--GHNSQQGMK-EFVAEIMSMGRLRHRNLVQLHG 394
           +G G FG VY          +A+K +      + G++ +   E+     LRH N+++L+G
Sbjct: 13  LGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 72
Query: 395 WCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIG-IAQSLLYLHEECN 453
           +      + L+ +Y P G+                  +QR    I  +A +L Y H   +
Sbjct: 73  YFHDATRVYLILEYAPLGTVYRELQKLSKFD------EQRTATYITELANALSYCH---S 123
Query: 454 QRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKA 513
           +RV+HRD+KP N+LL +    K+ DFG +    H  + + T + GTL YL PE+      
Sbjct: 124 KRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYLPPEMIEGRMH 180
Query: 514 TTSTDVYSYGILMLEVACGRRSIE 537
               D++S G+L  E   G+   E
Sbjct: 181 DEKVDLWSLGVLCYEFLVGKPPFE 204

>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 16/204 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRI--GHNSQQGMK-EFVAEIMSMGRLRHRNLVQLHG 394
           +G G FG VY          +A+K +      + G++ +   E+     LRH N+++L+G
Sbjct: 21  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 395 WCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIG-IAQSLLYLHEECN 453
           +      + L+ +Y P G+                  +QR    I  +A +L Y H   +
Sbjct: 81  YFHDATRVYLILEYAPLGTVYRELQKLSKFD------EQRTATYITELANALSYCH---S 131
Query: 454 QRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKA 513
           +RV+HRD+KP N+LL +    K+ DFG +    H  + + T + GTL YL PE+      
Sbjct: 132 KRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTDLCGTLDYLPPEMIEGRMH 188
Query: 514 TTSTDVYSYGILMLEVACGRRSIE 537
               D++S G+L  E   G+   E
Sbjct: 189 DEKVDLWSLGVLCYEFLVGKPPFE 212

>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 16/204 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRI--GHNSQQGMK-EFVAEIMSMGRLRHRNLVQLHG 394
           +G G FG VY          +A+K +      + G++ +   E+     LRH N+++L+G
Sbjct: 19  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 395 WCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIG-IAQSLLYLHEECN 453
           +      + L+ +Y P G+                  +QR    I  +A +L Y H   +
Sbjct: 79  YFHDATRVYLILEYAPLGTVYRELQKLSKFD------EQRTATYITELANALSYCH---S 129
Query: 454 QRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKA 513
           +RV+HRD+KP N+LL +    K+ DFG +    H  + + T + GTL YL PE+      
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYLPPEMIEGRMH 186
Query: 514 TTSTDVYSYGILMLEVACGRRSIE 537
               D++S G+L  E   G+   E
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPPFE 210

>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 100/207 (48%), Gaps = 29/207 (14%)
Query: 338 VGSGGFGRV----YRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLH 393
           +G G FG V    Y  L  + G  VA+K++ H++++ +++F  EI  +  L+H N+V+  
Sbjct: 19  LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 78
Query: 394 GWCRK--QDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEE 451
           G C    +  L L+ +Y+P GS                 + Q++K  I   + L Y  + 
Sbjct: 79  GVCYSAGRRNLKLIMEYLPYGS--------------LRDYLQKHKERIDHIKLLQYTSQI 124
Query: 452 CN-------QRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGT--LGY 502
           C        +R +HR++   NIL++     K+GDFGL K+             G   + +
Sbjct: 125 CKGMEYLGTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFW 184
Query: 503 LAPELTRTGKATTSTDVYSYGILMLEV 529
            APE     K + ++DV+S+G+++ E+
Sbjct: 185 YAPESLTESKFSVASDVWSFGVVLYEL 211

>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 16/204 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRI--GHNSQQGMK-EFVAEIMSMGRLRHRNLVQLHG 394
           +G G FG VY          +A+K +      + G++ +   E+     LRH N+++L+G
Sbjct: 16  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 395 WCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIG-IAQSLLYLHEECN 453
           +      + L+ +Y P G+                  +QR    I  +A +L Y H   +
Sbjct: 76  YFHDATRVYLILEYAPLGTVYRELQKLSKFD------EQRTATYITELANALSYCH---S 126
Query: 454 QRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKA 513
           +RV+HRD+KP N+LL +    K+ DFG +    H  + + T + GTL YL PE+      
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYLPPEMIEGRMH 183
Query: 514 TTSTDVYSYGILMLEVACGRRSIE 537
               D++S G+L  E   G+   E
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFE 207

>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 16/204 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRI--GHNSQQGMK-EFVAEIMSMGRLRHRNLVQLHG 394
           +G G FG VY          +A+K +      + G++ +   E+     LRH N+++L+G
Sbjct: 42  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 395 WCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIG-IAQSLLYLHEECN 453
           +      + L+ +Y P G+                  +QR    I  +A +L Y H   +
Sbjct: 102 YFHDATRVYLILEYAPLGTVYRELQKLSKFD------EQRTATYITELANALSYCH---S 152
Query: 454 QRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKA 513
           +RV+HRD+KP N+LL +    K+ DFG +    H  + + T + GTL YL PE+      
Sbjct: 153 KRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYLPPEMIEGRMH 209
Query: 514 TTSTDVYSYGILMLEVACGRRSIE 537
               D++S G+L  E   G+   E
Sbjct: 210 DEKVDLWSLGVLCYEFLVGKPPFE 233

>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 16/204 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRI--GHNSQQGMK-EFVAEIMSMGRLRHRNLVQLHG 394
           +G G FG VY          +A+K +      + G++ +   E+     LRH N+++L+G
Sbjct: 19  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 395 WCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIG-IAQSLLYLHEECN 453
           +      + L+ +Y P G+                  +QR    I  +A +L Y H   +
Sbjct: 79  YFHDATRVYLILEYAPLGTVYRELQKLSKFD------EQRTATYITELANALSYCH---S 129
Query: 454 QRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKA 513
           +RV+HRD+KP N+LL +    K+ DFG +    H  + + T + GTL YL PE+      
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYLPPEMIEGRMH 186
Query: 514 TTSTDVYSYGILMLEVACGRRSIE 537
               D++S G+L  E   G+   E
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPPFE 210

>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 16/204 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRI--GHNSQQGMK-EFVAEIMSMGRLRHRNLVQLHG 394
           +G G FG VY          +A+K +      + G++ +   E+     LRH N+++L+G
Sbjct: 20  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 395 WCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIG-IAQSLLYLHEECN 453
           +      + L+ +Y P G+                  +QR    I  +A +L Y H   +
Sbjct: 80  YFHDATRVYLILEYAPLGTVYRELQKLSKFD------EQRTATYITELANALSYCH---S 130
Query: 454 QRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKA 513
           +RV+HRD+KP N+LL +    K+ DFG +    H  + + T + GTL YL PE+      
Sbjct: 131 KRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYLPPEMIEGRMH 187
Query: 514 TTSTDVYSYGILMLEVACGRRSIE 537
               D++S G+L  E   G+   E
Sbjct: 188 DEKVDLWSLGVLCYEFLVGKPPFE 211

>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 16/204 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRI--GHNSQQGMK-EFVAEIMSMGRLRHRNLVQLHG 394
           +G G FG VY          +A+K +      + G++ +   E+     LRH N+++L+G
Sbjct: 33  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 92
Query: 395 WCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIG-IAQSLLYLHEECN 453
           +      + L+ +Y P G+                  +QR    I  +A +L Y H   +
Sbjct: 93  YFHDATRVYLILEYAPLGTVYRELQKLSKFD------EQRTATYITELANALSYCH---S 143
Query: 454 QRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKA 513
           +RV+HRD+KP N+LL +    K+ DFG +    H  + + T + GTL YL PE+      
Sbjct: 144 KRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYLPPEMIEGRMH 200
Query: 514 TTSTDVYSYGILMLEVACGRRSIE 537
               D++S G+L  E   G+   E
Sbjct: 201 DEKVDLWSLGVLCYEFLVGKPPFE 224

>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 16/204 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRI--GHNSQQGMK-EFVAEIMSMGRLRHRNLVQLHG 394
           +G G FG VY          +A+K +      + G++ +   E+     LRH N+++L+G
Sbjct: 15  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 74
Query: 395 WCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIG-IAQSLLYLHEECN 453
           +      + L+ +Y P G+                  +QR    I  +A +L Y H   +
Sbjct: 75  YFHDATRVYLILEYAPLGTVYRELQKLSKFD------EQRTATYITELANALSYCH---S 125
Query: 454 QRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKA 513
           +RV+HRD+KP N+LL +    K+ DFG +    H  + + T + GTL YL PE+      
Sbjct: 126 KRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYLPPEMIEGRMH 182
Query: 514 TTSTDVYSYGILMLEVACGRRSIE 537
               D++S G+L  E   G+   E
Sbjct: 183 DEKVDLWSLGVLCYEFLVGKPPFE 206

>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 53/192 (27%), Positives = 92/192 (47%), Gaps = 9/192 (4%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +GSG FG V+ G   +   +VAIK I   S     +F+ E   M +L H  LVQL+G C 
Sbjct: 35  IGSGQFGLVHLGYWLNKD-KVAIKTIKEGSMSE-DDFIEEAEVMMKLSHPKLVQLYGVCL 92
Query: 398 KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQRVV 457
           +Q  + LV++++ +G                   +    + + + + + YL E C   V+
Sbjct: 93  EQAPICLVFEFMEHGCLSDYLRTQRGLFAA----ETLLGMCLDVCEGMAYLEEAC---VI 145
Query: 458 HRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTST 517
           HRD+   N L+      K+ DFG+ +         +T     + + +PE+    + ++ +
Sbjct: 146 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 205
Query: 518 DVYSYGILMLEV 529
           DV+S+G+LM EV
Sbjct: 206 DVWSFGVLMWEV 217

>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 16/204 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRI--GHNSQQGMK-EFVAEIMSMGRLRHRNLVQLHG 394
           +G G FG VY          +A+K +      + G++ +   E+     LRH N+++L+G
Sbjct: 21  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 395 WCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIG-IAQSLLYLHEECN 453
           +      + L+ +Y P G+                  +QR    I  +A +L Y H   +
Sbjct: 81  YFHDATRVYLILEYAPLGTVYRELQKLSKFD------EQRTATYITELANALSYCH---S 131
Query: 454 QRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKA 513
           +RV+HRD+KP N+LL +    K+ DFG +    H  + + T + GTL YL PE+      
Sbjct: 132 KRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYLPPEMIEGRMH 188
Query: 514 TTSTDVYSYGILMLEVACGRRSIE 537
               D++S G+L  E   G+   E
Sbjct: 189 DEKVDLWSLGVLCYEFLVGKPPFE 212

>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/200 (27%), Positives = 95/200 (47%), Gaps = 15/200 (7%)
Query: 338 VGSGGFGRV----YRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLH 393
           +G G FG V    Y  L  + G  VA+K++ H++++ +++F  EI  +  L+H N+V+  
Sbjct: 21  LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 394 GWCRK--QDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEE 451
           G C    +  L L+ +Y+P GS                      +I  G+     YL   
Sbjct: 81  GVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGME----YL--- 133
Query: 452 CNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGT--LGYLAPELTR 509
             +R +HRD+   NIL++     K+GDFGL K+             G   + + APE   
Sbjct: 134 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 193
Query: 510 TGKATTSTDVYSYGILMLEV 529
             K + ++DV+S+G+++ E+
Sbjct: 194 ESKFSVASDVWSFGVVLYEL 213

>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 78.2 bits (191), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/213 (30%), Positives = 109/213 (51%), Gaps = 14/213 (6%)
Query: 330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQ-QGMKEF-VAEIMSMGRLRHR 387
           + F +   +G G +G VY+      G  VA+K+I  +++ +G+    + EI  +  L H 
Sbjct: 2   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 388 NLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
           N+V+L      +++L LV+++V                         +++L G+A    +
Sbjct: 62  NIVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLA----F 117
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQT-THIVGTLGYLAPE 506
            H   + RV+HRD+KP N+L++T    KL DFGLA+ +  G   +T TH V TL Y APE
Sbjct: 118 CH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPE 172
Query: 507 LTRTGK-ATTSTDVYSYGILMLEVACGRRSIEP 538
           +    K  +T+ D++S G +  E+   RR++ P
Sbjct: 173 ILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFP 204

>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 93/192 (48%), Gaps = 9/192 (4%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +GSG FG V+ G   +   +VAIK I   +    ++F+ E   M +L H  LVQL+G C 
Sbjct: 13  IGSGQFGLVHLGYWLNKD-KVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLYGVCL 70
Query: 398 KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQRVV 457
           +Q  + LV++++ +G                   +    + + + + + YL E C   V+
Sbjct: 71  EQAPICLVFEFMEHGCLSDYLRTQRGLFAA----ETLLGMCLDVCEGMAYLEEAC---VI 123
Query: 458 HRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTST 517
           HRD+   N L+      K+ DFG+ +         +T     + + +PE+    + ++ +
Sbjct: 124 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 183
Query: 518 DVYSYGILMLEV 529
           DV+S+G+LM EV
Sbjct: 184 DVWSFGVLMWEV 195

>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 93/192 (48%), Gaps = 9/192 (4%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +GSG FG V+ G   +   +VAIK I   +    ++F+ E   M +L H  LVQL+G C 
Sbjct: 15  IGSGQFGLVHLGYWLNKD-KVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLYGVCL 72
Query: 398 KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQRVV 457
           +Q  + LV++++ +G                   +    + + + + + YL E C   V+
Sbjct: 73  EQAPICLVFEFMEHGCLSDYLRTQRGLFAA----ETLLGMCLDVCEGMAYLEEAC---VI 125
Query: 458 HRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTST 517
           HRD+   N L+      K+ DFG+ +         +T     + + +PE+    + ++ +
Sbjct: 126 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 185
Query: 518 DVYSYGILMLEV 529
           DV+S+G+LM EV
Sbjct: 186 DVWSFGVLMWEV 197

>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 101/209 (48%), Gaps = 9/209 (4%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +G+G FG V+ G       +VA+K +   S      F+AE   M +L+H+ LV+L+    
Sbjct: 23  LGAGQFGEVWMGYYNG-HTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYA-VV 79
Query: 398 KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQRVV 457
            Q+ + ++ +Y+ NGS                T ++   +   IA+ + ++ E   +  +
Sbjct: 80  TQEPIYIITEYMENGSLVDFLKTPSGIKL---TINKLLDMAAQIAEGMAFIEE---RNYI 133
Query: 458 HRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTST 517
           HRD++ +NIL+   L+ K+ DFGLA++ E             + + APE    G  T  +
Sbjct: 134 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 193
Query: 518 DVYSYGILMLEVACGRRSIEPQKAAAELL 546
           DV+S+GIL+ E+    R   P     E++
Sbjct: 194 DVWSFGILLTEIVTHGRIPYPGMTNPEVI 222

>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain Length = 306

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/224 (25%), Positives = 101/224 (45%), Gaps = 35/224 (15%)
Query: 332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQ 391
           F E  L+GSGGFG+V++      G    I+R+ +N+++  +E    + ++ +L H N+V 
Sbjct: 14  FKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAERE----VKALAKLDHVNIVH 69
Query: 392 LHG-WC------RKQDELLLVYDYVPNGSXXXXXXXXXX--------XXXXXXTWDQRYK 436
            +G W          D+ L   DY P  S                         W ++ +
Sbjct: 70  YNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRR 129
Query: 437 -----------ILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIY 485
                      +   I + + Y+H   +++++HRD+KPSNI L      K+GDFGL    
Sbjct: 130 GEKLDKVLALELFEQITKGVDYIH---SKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSL 186
Query: 486 EHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEV 529
           ++    + T   GTL Y++PE   +       D+Y+ G+++ E+
Sbjct: 187 KNDG--KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAEL 228

>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 102/209 (48%), Gaps = 9/209 (4%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +G+G FG V+ G   +   +VA+K +   S      F+AE   M +L+H+ LV+L+    
Sbjct: 30  LGAGQFGEVWMGYY-NGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYA-VV 86
Query: 398 KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQRVV 457
            Q+ + ++ +Y+ NGS                T ++   +   IA+ + ++ E   +  +
Sbjct: 87  TQEPIYIITEYMENGSLVDFLKTPSGIKL---TINKLLDMAAQIAEGMAFIEE---RNYI 140
Query: 458 HRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTST 517
           HRD++ +NIL+   L+ K+ DFGLA++ E             + + APE    G  T  +
Sbjct: 141 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 200
Query: 518 DVYSYGILMLEVACGRRSIEPQKAAAELL 546
           DV+S+GIL+ E+    R   P     E++
Sbjct: 201 DVWSFGILLTEIVTHGRIPYPGMTNPEVI 229

>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 101/209 (48%), Gaps = 9/209 (4%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +G+G FG V+ G       +VA+K +   S      F+AE   M +L+H+ LV+L+    
Sbjct: 21  LGAGQFGEVWMGYYNG-HTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYA-VV 77
Query: 398 KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQRVV 457
            Q+ + ++ +Y+ NGS                T ++   +   IA+ + ++ E   +  +
Sbjct: 78  TQEPIYIITEYMENGSLVDFLKTPSGIKL---TINKLLDMAAQIAEGMAFIEE---RNYI 131
Query: 458 HRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTST 517
           HRD++ +NIL+   L+ K+ DFGLA++ E             + + APE    G  T  +
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 518 DVYSYGILMLEVACGRRSIEPQKAAAELL 546
           DV+S+GIL+ E+    R   P     E++
Sbjct: 192 DVWSFGILLTEIVTHGRIPYPGMTNPEVI 220

>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 93/192 (48%), Gaps = 9/192 (4%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +GSG FG V+ G   +   +VAIK I   +    ++F+ E   M +L H  LVQL+G C 
Sbjct: 18  IGSGQFGLVHLGYWLNKD-KVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLYGVCL 75
Query: 398 KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQRVV 457
           +Q  + LV++++ +G                   +    + + + + + YL E C   V+
Sbjct: 76  EQAPICLVFEFMEHGCLSDYLRTQRGLFAA----ETLLGMCLDVCEGMAYLEEAC---VI 128
Query: 458 HRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTST 517
           HRD+   N L+      K+ DFG+ +         +T     + + +PE+    + ++ +
Sbjct: 129 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 188
Query: 518 DVYSYGILMLEV 529
           DV+S+G+LM EV
Sbjct: 189 DVWSFGVLMWEV 200

>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 101/209 (48%), Gaps = 9/209 (4%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +G+G FG V+ G       +VA+K +   S      F+AE   M +L+H+ LV+L+    
Sbjct: 22  LGAGQFGEVWMGYYNG-HTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYA-VV 78
Query: 398 KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQRVV 457
            Q+ + ++ +Y+ NGS                T ++   +   IA+ + ++ E   +  +
Sbjct: 79  TQEPIYIITEYMENGSLVDFLKTPSGIKL---TINKLLDMAAQIAEGMAFIEE---RNYI 132
Query: 458 HRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTST 517
           HRD++ +NIL+   L+ K+ DFGLA++ E             + + APE    G  T  +
Sbjct: 133 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 192
Query: 518 DVYSYGILMLEVACGRRSIEPQKAAAELL 546
           DV+S+GIL+ E+    R   P     E++
Sbjct: 193 DVWSFGILLTEIVTHGRIPYPGMTNPEVI 221

>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 326

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 97/203 (47%), Gaps = 20/203 (9%)
Query: 338 VGSGGFGRVYRGL-MPSLGLEVAIKRIG-HNSQQGMK----EFVAEIMSMGRLRHRNLVQ 391
           +G G +G+V++   + + G  VA+KR+     ++GM       VA +  +    H N+V+
Sbjct: 19  IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 392 LHGWCR-----KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLL 446
           L   C      ++ +L LV+++V                      D  +++L G    L 
Sbjct: 79  LFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRG----LD 134
Query: 447 YLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPE 506
           +LH   + RVVHRD+KP NIL+ +    KL DFGLA+IY        T +V TL Y APE
Sbjct: 135 FLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQM--ALTSVVVTLWYRAPE 189
Query: 507 LTRTGKATTSTDVYSYGILMLEV 529
           +       T  D++S G +  E+
Sbjct: 190 VLLQSSYATPVDLWSVGCIFAEM 212

>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 102/209 (48%), Gaps = 9/209 (4%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +G+G FG V+ G   +   +VA+K +   S      F+AE   M +L+H+ LV+L+    
Sbjct: 21  LGAGQFGEVWMGYY-NGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYA-VV 77
Query: 398 KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQRVV 457
            Q+ + ++ +Y+ NGS                T ++   +   IA+ + ++ E   +  +
Sbjct: 78  TQEPIYIITEYMENGSLVDFLKTPSGIKL---TINKLLDMAAQIAEGMAFIEE---RNYI 131
Query: 458 HRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTST 517
           HRD++ +NIL+   L+ K+ DFGLA++ E             + + APE    G  T  +
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 518 DVYSYGILMLEVACGRRSIEPQKAAAELL 546
           DV+S+GIL+ E+    R   P     E++
Sbjct: 192 DVWSFGILLTEIVTHGRIPYPGMTNPEVI 220

>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 16/204 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRI--GHNSQQGMK-EFVAEIMSMGRLRHRNLVQLHG 394
           +G G FG VY          +A+K +      + G++ +   E+     LRH N+++L+G
Sbjct: 17  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 395 WCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIG-IAQSLLYLHEECN 453
           +      + L+ +Y P G+                  +QR    I  +A +L Y H   +
Sbjct: 77  YFHDATRVYLILEYAPLGTVYRELQKLSKFD------EQRTATYITELANALSYCH---S 127
Query: 454 QRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKA 513
           +RV+HRD+KP N+LL +    K+ DFG +    H  + + T + GTL YL PE+      
Sbjct: 128 KRVIHRDIKPENLLLGSAGELKIADFGWSC---HAPSSRRTTLSGTLDYLPPEMIEGRMH 184
Query: 514 TTSTDVYSYGILMLEVACGRRSIE 537
               D++S G+L  E   G+   E
Sbjct: 185 DEKVDLWSLGVLCYEFLVGKPPFE 208

>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 109/213 (51%), Gaps = 14/213 (6%)
Query: 330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQ-QGMKEF-VAEIMSMGRLRHR 387
           + F +   +G G +G VY+      G  VA+K+I  +++ +G+    + EI  +  L H 
Sbjct: 3   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 388 NLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
           N+V+L      +++L LV++++                         +++L G+A    +
Sbjct: 63  NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA----F 118
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQT-THIVGTLGYLAPE 506
            H   + RV+HRD+KP N+L++T    KL DFGLA+ +  G   +T TH V TL Y APE
Sbjct: 119 CH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPE 173
Query: 507 LTRTGK-ATTSTDVYSYGILMLEVACGRRSIEP 538
           +    K  +T+ D++S G +  E+   RR++ P
Sbjct: 174 ILLGXKYYSTAVDIWSLGCIFAEMVT-RRALFP 205

>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 101/209 (48%), Gaps = 9/209 (4%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +G+G FG V+ G       +VA+K +   S      F+AE   M +L+H+ LV+L+    
Sbjct: 21  LGAGQFGEVWMGYYNG-HTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYA-VV 77
Query: 398 KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQRVV 457
            Q+ + ++ +Y+ NGS                T ++   +   IA+ + ++ E   +  +
Sbjct: 78  TQEPIYIITEYMENGSLVDFLKTPSGIKL---TINKLLDMAAQIAEGMAFIEE---RNYI 131
Query: 458 HRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTST 517
           HRD++ +NIL+   L+ K+ DFGLA++ E             + + APE    G  T  +
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 518 DVYSYGILMLEVACGRRSIEPQKAAAELL 546
           DV+S+GIL+ E+    R   P     E++
Sbjct: 192 DVWSFGILLTEIVTHGRIPYPGMTNPEVI 220

>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral Cyclin Length = 308

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 97/203 (47%), Gaps = 20/203 (9%)
Query: 338 VGSGGFGRVYRGL-MPSLGLEVAIKRIG-HNSQQGMK----EFVAEIMSMGRLRHRNLVQ 391
           +G G +G+V++   + + G  VA+KR+     ++GM       VA +  +    H N+V+
Sbjct: 19  IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 392 LHGWCR-----KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLL 446
           L   C      ++ +L LV+++V                      D  +++L G    L 
Sbjct: 79  LFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRG----LD 134
Query: 447 YLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPE 506
           +LH   + RVVHRD+KP NIL+ +    KL DFGLA+IY        T +V TL Y APE
Sbjct: 135 FLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA--LTSVVVTLWYRAPE 189
Query: 507 LTRTGKATTSTDVYSYGILMLEV 529
           +       T  D++S G +  E+
Sbjct: 190 VLLQSSYATPVDLWSVGCIFAEM 212

>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 101/209 (48%), Gaps = 9/209 (4%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +G+G FG V+ G       +VA+K +   S      F+AE   M +L+H+ LV+L+    
Sbjct: 16  LGAGQFGEVWMGYYNG-HTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYA-VV 72
Query: 398 KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQRVV 457
            Q+ + ++ +Y+ NGS                T ++   +   IA+ + ++ E   +  +
Sbjct: 73  TQEPIYIITEYMENGSLVDFLKTPSGIKL---TINKLLDMAAQIAEGMAFIEE---RNYI 126
Query: 458 HRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTST 517
           HRD++ +NIL+   L+ K+ DFGLA++ E             + + APE    G  T  +
Sbjct: 127 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 186
Query: 518 DVYSYGILMLEVACGRRSIEPQKAAAELL 546
           DV+S+GIL+ E+    R   P     E++
Sbjct: 187 DVWSFGILLTEIVTHGRIPYPGMTNPEVI 215

>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 109/213 (51%), Gaps = 14/213 (6%)
Query: 330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQ-QGMKEF-VAEIMSMGRLRHR 387
           + F +   +G G +G VY+      G  VA+K+I  +++ +G+    + EI  +  L H 
Sbjct: 10  ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 388 NLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
           N+V+L      +++L LV++++                         +++L G+A    +
Sbjct: 70  NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA----F 125
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQT-THIVGTLGYLAPE 506
            H   + RV+HRD+KP N+L++T    KL DFGLA+ +  G   +T TH V TL Y APE
Sbjct: 126 CH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPE 180
Query: 507 LTRTGK-ATTSTDVYSYGILMLEVACGRRSIEP 538
           +    K  +T+ D++S G +  E+   RR++ P
Sbjct: 181 ILLGXKYYSTAVDIWSLGCIFAEMVT-RRALFP 212

>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 101/209 (48%), Gaps = 9/209 (4%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +G+G FG V+ G       +VA+K +   S      F+AE   M +L+H+ LV+L+    
Sbjct: 26  LGAGQFGEVWMGYYNG-HTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYA-VV 82
Query: 398 KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQRVV 457
            Q+ + ++ +Y+ NGS                T ++   +   IA+ + ++ E   +  +
Sbjct: 83  TQEPIYIITEYMENGSLVDFLKTPSGIKL---TINKLLDMAAQIAEGMAFIEE---RNYI 136
Query: 458 HRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTST 517
           HRD++ +NIL+   L+ K+ DFGLA++ E             + + APE    G  T  +
Sbjct: 137 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 196
Query: 518 DVYSYGILMLEVACGRRSIEPQKAAAELL 546
           DV+S+GIL+ E+    R   P     E++
Sbjct: 197 DVWSFGILLTEIVTHGRIPYPGMTNPEVI 225

>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 109/213 (51%), Gaps = 14/213 (6%)
Query: 330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQ-QGMKEF-VAEIMSMGRLRHR 387
           + F +   +G G +G VY+      G  VA+K+I  +++ +G+    + EI  +  L H 
Sbjct: 4   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 388 NLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
           N+V+L      +++L LV++++                         +++L G+A    +
Sbjct: 64  NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA----F 119
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQT-THIVGTLGYLAPE 506
            H   + RV+HRD+KP N+L++T    KL DFGLA+ +  G   +T TH V TL Y APE
Sbjct: 120 CH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPE 174
Query: 507 LTRTGK-ATTSTDVYSYGILMLEVACGRRSIEP 538
           +    K  +T+ D++S G +  E+   RR++ P
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFP 206

>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 109/213 (51%), Gaps = 14/213 (6%)
Query: 330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQ-QGMKEF-VAEIMSMGRLRHR 387
           + F +   +G G +G VY+      G  VA+K+I  +++ +G+    + EI  +  L H 
Sbjct: 2   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 388 NLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
           N+V+L      +++L LV++++                         +++L G+A    +
Sbjct: 62  NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA----F 117
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQT-THIVGTLGYLAPE 506
            H   + RV+HRD+KP N+L++T    KL DFGLA+ +  G   +T TH V TL Y APE
Sbjct: 118 CH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPE 172
Query: 507 LTRTGK-ATTSTDVYSYGILMLEVACGRRSIEP 538
           +    K  +T+ D++S G +  E+   RR++ P
Sbjct: 173 ILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFP 204

>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 109/213 (51%), Gaps = 14/213 (6%)
Query: 330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQ-QGMKEF-VAEIMSMGRLRHR 387
           + F +   +G G +G VY+      G  VA+K+I  +++ +G+    + EI  +  L H 
Sbjct: 3   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 388 NLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
           N+V+L      +++L LV++++                         +++L G+A    +
Sbjct: 63  NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA----F 118
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQT-THIVGTLGYLAPE 506
            H   + RV+HRD+KP N+L++T    KL DFGLA+ +  G   +T TH V TL Y APE
Sbjct: 119 CH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPE 173
Query: 507 LTRTGK-ATTSTDVYSYGILMLEVACGRRSIEP 538
           +    K  +T+ D++S G +  E+   RR++ P
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFP 205

>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 109/213 (51%), Gaps = 14/213 (6%)
Query: 330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQ-QGMKEF-VAEIMSMGRLRHR 387
           + F +   +G G +G VY+      G  VA+K+I  +++ +G+    + EI  +  L H 
Sbjct: 10  ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 388 NLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
           N+V+L      +++L LV++++                         +++L G+A    +
Sbjct: 70  NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA----F 125
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQT-THIVGTLGYLAPE 506
            H   + RV+HRD+KP N+L++T    KL DFGLA+ +  G   +T TH V TL Y APE
Sbjct: 126 CH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPE 180
Query: 507 LTRTGK-ATTSTDVYSYGILMLEVACGRRSIEP 538
           +    K  +T+ D++S G +  E+   RR++ P
Sbjct: 181 ILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFP 212

>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor Length = 307

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 97/203 (47%), Gaps = 20/203 (9%)
Query: 338 VGSGGFGRVYRGL-MPSLGLEVAIKRIG-HNSQQGMK----EFVAEIMSMGRLRHRNLVQ 391
           +G G +G+V++   + + G  VA+KR+     ++GM       VA +  +    H N+V+
Sbjct: 19  IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 392 LHGWCR-----KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLL 446
           L   C      ++ +L LV+++V                      D  +++L G    L 
Sbjct: 79  LFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRG----LD 134
Query: 447 YLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPE 506
           +LH   + RVVHRD+KP NIL+ +    KL DFGLA+IY        T +V TL Y APE
Sbjct: 135 FLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA--LTSVVVTLWYRAPE 189
Query: 507 LTRTGKATTSTDVYSYGILMLEV 529
           +       T  D++S G +  E+
Sbjct: 190 VLLQSSYATPVDLWSVGCIFAEM 212

>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 102/209 (48%), Gaps = 9/209 (4%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +G+G FG V+ G   +   +VA+K +   S      F+AE   M +L+H+ LV+L+    
Sbjct: 27  LGAGQFGEVWMGYY-NGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYA-VV 83
Query: 398 KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQRVV 457
            Q+ + ++ +Y+ NGS                T ++   +   IA+ + ++ E   +  +
Sbjct: 84  TQEPIYIITEYMENGSLVDFLKTPSGIKL---TINKLLDMAAQIAEGMAFIEE---RNYI 137
Query: 458 HRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTST 517
           HRD++ +NIL+   L+ K+ DFGLA++ E             + + APE    G  T  +
Sbjct: 138 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 197
Query: 518 DVYSYGILMLEVACGRRSIEPQKAAAELL 546
           DV+S+GIL+ E+    R   P     E++
Sbjct: 198 DVWSFGILLTEIVTHGRIPYPGMTNPEVI 226

>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 93/204 (45%), Gaps = 16/204 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRI--GHNSQQGMK-EFVAEIMSMGRLRHRNLVQLHG 394
           +G G FG VY          +A+K +      + G++ +   E+     LRH N+++L+G
Sbjct: 21  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 395 WCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIG-IAQSLLYLHEECN 453
           +      + L+ +Y P G+                  +QR    I  +A +L Y H   +
Sbjct: 81  YFHDATRVYLILEYAPLGTVYRELQKLSKFD------EQRTATYITELANALSYCH---S 131
Query: 454 QRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKA 513
           +RV+HRD+KP N+LL +    K+ DFG +    H  + + T + GTL YL PE       
Sbjct: 132 KRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYLPPEXIEGRXH 188
Query: 514 TTSTDVYSYGILMLEVACGRRSIE 537
               D++S G+L  E   G+   E
Sbjct: 189 DEKVDLWSLGVLCYEFLVGKPPFE 212

>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 109/213 (51%), Gaps = 14/213 (6%)
Query: 330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQ-QGMKEF-VAEIMSMGRLRHR 387
           + F +   +G G +G VY+      G  VA+K+I  +++ +G+    + EI  +  L H 
Sbjct: 3   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 388 NLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
           N+V+L      +++L LV++++                         +++L G+A    +
Sbjct: 63  NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA----F 118
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQT-THIVGTLGYLAPE 506
            H   + RV+HRD+KP N+L++T    KL DFGLA+ +  G   +T TH V TL Y APE
Sbjct: 119 CH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPE 173
Query: 507 LTRTGK-ATTSTDVYSYGILMLEVACGRRSIEP 538
           +    K  +T+ D++S G +  E+   RR++ P
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFP 205

>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 109/213 (51%), Gaps = 14/213 (6%)
Query: 330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQ-QGMKEF-VAEIMSMGRLRHR 387
           + F +   +G G +G VY+      G  VA+K+I  +++ +G+    + EI  +  L H 
Sbjct: 2   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 388 NLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
           N+V+L      +++L LV++++                         +++L G+A    +
Sbjct: 62  NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA----F 117
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQT-THIVGTLGYLAPE 506
            H   + RV+HRD+KP N+L++T    KL DFGLA+ +  G   +T TH V TL Y APE
Sbjct: 118 CH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPE 172
Query: 507 LTRTGK-ATTSTDVYSYGILMLEVACGRRSIEP 538
           +    K  +T+ D++S G +  E+   RR++ P
Sbjct: 173 ILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFP 204

>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 102/209 (48%), Gaps = 9/209 (4%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +G+G FG V+ G   +   +VA+K +   S      F+AE   M +L+H+ LV+L+    
Sbjct: 29  LGAGQFGEVWMGYY-NGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYA-VV 85
Query: 398 KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQRVV 457
            Q+ + ++ +Y+ NGS                T ++   +   IA+ + ++ E   +  +
Sbjct: 86  TQEPIYIITEYMENGSLVDFLKTPSGIKL---TINKLLDMAAQIAEGMAFIEE---RNYI 139
Query: 458 HRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTST 517
           HRD++ +NIL+   L+ K+ DFGLA++ E             + + APE    G  T  +
Sbjct: 140 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 199
Query: 518 DVYSYGILMLEVACGRRSIEPQKAAAELL 546
           DV+S+GIL+ E+    R   P     E++
Sbjct: 200 DVWSFGILLTEIVTHGRIPYPGMTNPEVI 228

>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277

Iteration: 1
 Score = 77.4 bits (189), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 101/209 (48%), Gaps = 9/209 (4%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +G+G FG V+ G       +VA+K +   S      F+AE   M +L+H+ LV+L+    
Sbjct: 27  LGAGQFGEVWMGYYNG-HTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYA-VV 83
Query: 398 KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQRVV 457
            Q+ + ++ +Y+ NGS                T ++   +   IA+ + ++ E   +  +
Sbjct: 84  TQEPIYIITEYMENGSLVDFLKTPSGIKL---TINKLLDMAAQIAEGMAFIEE---RNYI 137
Query: 458 HRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTST 517
           HRD++ +NIL+   L+ K+ DFGLA++ E             + + APE    G  T  +
Sbjct: 138 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 197
Query: 518 DVYSYGILMLEVACGRRSIEPQKAAAELL 546
           DV+S+GIL+ E+    R   P     E++
Sbjct: 198 DVWSFGILLTEIVTHGRIPYPGMTNPEVI 226

>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n Inactivating Mutant In Apo Form Length = 303

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 60/224 (26%), Positives = 96/224 (42%), Gaps = 35/224 (15%)
Query: 332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRH----- 386
           F E  ++G G FG+V +          AIK+I H +++ +   ++E+  +  L H     
Sbjct: 8   FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRH-TEEKLSTILSEVXLLASLNHQYVVR 66
Query: 387 --------RNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKIL 438
                   RN V+     +K+  L +  +Y  N +                 W    ++ 
Sbjct: 67  YYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYW----RLF 122
Query: 439 IGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEH----------- 487
             I ++L Y+H   +Q ++HR++KP NI +D   N K+GDFGLAK               
Sbjct: 123 RQILEALSYIH---SQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQN 179
Query: 488 --GANPQTTHIVGTLGYLAPE-LTRTGKATTSTDVYSYGILMLE 528
             G++   T  +GT  Y+A E L  TG      D YS GI+  E
Sbjct: 180 LPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFE 223

>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 61/208 (29%), Positives = 105/208 (50%), Gaps = 16/208 (7%)
Query: 335 QNLVGSGGFGRVYRGLMPSLG---LEVAIK--RIGHNSQQGMKEFVAEIMSMGRLRHRNL 389
           + ++GSG  G V  G +   G   + VAIK  + G+  +Q  ++F++E   MG+  H N+
Sbjct: 54  EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQ-RRDFLSEASIMGQFDHPNI 112
Query: 390 VQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLH 449
           ++L G   +    ++V +Y+ NGS                T  Q   +L G+   + YL 
Sbjct: 113 IRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQF----TIMQLVGMLRGVGAGMRYL- 167
Query: 450 EECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLG--YLAPEL 507
              +   VHRD+   N+L+D+ L  K+ DFGL+++ E   +   T   G +   + APE 
Sbjct: 168 --SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEA 225
Query: 508 TRTGKATTSTDVYSYGILMLEV-ACGRR 534
                 ++++DV+S+G++M EV A G R
Sbjct: 226 IAFRTFSSASDVWSFGVVMWEVLAYGER 253

>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 56/204 (27%), Positives = 92/204 (45%), Gaps = 16/204 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRI--GHNSQQGMK-EFVAEIMSMGRLRHRNLVQLHG 394
           +G G FG VY          +A+K +      + G++ +   E+     LRH N+++L+G
Sbjct: 21  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 395 WCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIG-IAQSLLYLHEECN 453
           +      + L+ +Y P G                   +QR    I  +A +L Y H   +
Sbjct: 81  YFHDATRVYLILEYAPRGEVYKELQKLSKFD------EQRTATYITELANALSYCH---S 131
Query: 454 QRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKA 513
           +RV+HRD+KP N+LL +    K+ DFG +    H  + +   + GTL YL PE+      
Sbjct: 132 KRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRXXLXGTLDYLPPEMIEGRMH 188
Query: 514 TTSTDVYSYGILMLEVACGRRSIE 537
               D++S G+L  E   G+   E
Sbjct: 189 DEKVDLWSLGVLCYEFLVGKPPFE 212

>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 109/213 (51%), Gaps = 14/213 (6%)
Query: 330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQ-QGMKEF-VAEIMSMGRLRHR 387
           + F +   +G G +G VY+      G  VA+K+I  +++ +G+    + EI  +  L H 
Sbjct: 7   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 388 NLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
           N+V+L      +++L LV++++                         +++L G+A    +
Sbjct: 67  NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA----F 122
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQT-THIVGTLGYLAPE 506
            H   + RV+HRD+KP N+L++T    KL DFGLA+ +  G   +T TH V TL Y APE
Sbjct: 123 CH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPE 177
Query: 507 LTRTGK-ATTSTDVYSYGILMLEVACGRRSIEP 538
           +    K  +T+ D++S G +  E+   RR++ P
Sbjct: 178 ILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFP 209

>pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 102/209 (48%), Gaps = 9/209 (4%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +G+G FG V+ G   +   +VA+K +   S      F+AE   M +L+H+ LV+L+    
Sbjct: 31  LGAGQFGEVWMGYY-NGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYA-VV 87
Query: 398 KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQRVV 457
            Q+ + ++ +Y+ NGS                T ++   +   IA+ + ++ E   +  +
Sbjct: 88  TQEPIYIITEYMENGSLVDFLKTPSGIKL---TINKLLDMAAQIAEGMAFIEE---RNYI 141
Query: 458 HRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTST 517
           HRD++ +NIL+   L+ K+ DFGLA++ E             + + APE    G  T  +
Sbjct: 142 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 201
Query: 518 DVYSYGILMLEVACGRRSIEPQKAAAELL 546
           DV+S+GIL+ E+    R   P     E++
Sbjct: 202 DVWSFGILLTEIVTHGRIPYPGMTNPEVI 230

>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268

Iteration: 1
 Score = 76.6 bits (187), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 56/204 (27%), Positives = 93/204 (45%), Gaps = 16/204 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRI--GHNSQQGMK-EFVAEIMSMGRLRHRNLVQLHG 394
           +G G FG VY          +A+K +      + G++ +   E+     LRH N+++L+G
Sbjct: 16  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 395 WCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIG-IAQSLLYLHEECN 453
           +      + L+ +Y P G+                  +QR    I  +A +L Y H   +
Sbjct: 76  YFHDATRVYLILEYAPLGTVYRELQKLSKFD------EQRTATYITELANALSYCH---S 126
Query: 454 QRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKA 513
           +RV+HRD+KP N+LL +    K+ DFG +    H  + +   + GTL YL PE+      
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRXXLCGTLDYLPPEMIEGRMH 183
Query: 514 TTSTDVYSYGILMLEVACGRRSIE 537
               D++S G+L  E   G+   E
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFE 207

>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282

Iteration: 1
 Score = 76.6 bits (187), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 56/204 (27%), Positives = 93/204 (45%), Gaps = 16/204 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRI--GHNSQQGMK-EFVAEIMSMGRLRHRNLVQLHG 394
           +G G FG VY          +A+K +      + G++ +   E+     LRH N+++L+G
Sbjct: 18  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 395 WCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIG-IAQSLLYLHEECN 453
           +      + L+ +Y P G+                  +QR    I  +A +L Y H   +
Sbjct: 78  YFHDATRVYLILEYAPLGTVYRELQKLSKFD------EQRTATYITELANALSYCH---S 128
Query: 454 QRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKA 513
           +RV+HRD+KP N+LL +    K+ DFG +    H  + +   + GTL YL PE+      
Sbjct: 129 KRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRXXLCGTLDYLPPEMIEGRMH 185
Query: 514 TTSTDVYSYGILMLEVACGRRSIE 537
               D++S G+L  E   G+   E
Sbjct: 186 DEKVDLWSLGVLCYEFLVGKPPFE 209

>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268

Iteration: 1
 Score = 76.6 bits (187), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 56/204 (27%), Positives = 93/204 (45%), Gaps = 16/204 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRI--GHNSQQGMK-EFVAEIMSMGRLRHRNLVQLHG 394
           +G G FG VY          +A+K +      + G++ +   E+     LRH N+++L+G
Sbjct: 16  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 395 WCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIG-IAQSLLYLHEECN 453
           +      + L+ +Y P G+                  +QR    I  +A +L Y H   +
Sbjct: 76  YFHDATRVYLILEYAPLGTVYRELQKLSKFD------EQRTATYITELANALSYCH---S 126
Query: 454 QRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKA 513
           +RV+HRD+KP N+LL +    K+ DFG +    H  + +   + GTL YL PE+      
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRAALCGTLDYLPPEMIEGRMH 183
Query: 514 TTSTDVYSYGILMLEVACGRRSIE 537
               D++S G+L  E   G+   E
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFE 207

>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271

Iteration: 1
 Score = 76.6 bits (187), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 56/204 (27%), Positives = 93/204 (45%), Gaps = 16/204 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRI--GHNSQQGMK-EFVAEIMSMGRLRHRNLVQLHG 394
           +G G FG VY          +A+K +      + G++ +   E+     LRH N+++L+G
Sbjct: 19  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 395 WCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIG-IAQSLLYLHEECN 453
           +      + L+ +Y P G+                  +QR    I  +A +L Y H   +
Sbjct: 79  YFHDATRVYLILEYAPLGTVYRELQKLSKFD------EQRTATYITELANALSYCH---S 129
Query: 454 QRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKA 513
           +RV+HRD+KP N+LL +    K+ DFG +    H  + +   + GTL YL PE+      
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRDDLCGTLDYLPPEMIEGRMH 186
Query: 514 TTSTDVYSYGILMLEVACGRRSIE 537
               D++S G+L  E   G+   E
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPPFE 210

>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 76.6 bits (187), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 56/204 (27%), Positives = 93/204 (45%), Gaps = 16/204 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRI--GHNSQQGMK-EFVAEIMSMGRLRHRNLVQLHG 394
           +G G FG VY          +A+K +      + G++ +   E+     LRH N+++L+G
Sbjct: 19  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 395 WCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIG-IAQSLLYLHEECN 453
           +      + L+ +Y P G+                  +QR    I  +A +L Y H   +
Sbjct: 79  YFHDATRVYLILEYAPLGTVYRELQKLSKFD------EQRTATYITELANALSYCH---S 129
Query: 454 QRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKA 513
           +RV+HRD+KP N+LL +    K+ DFG +    H  + +   + GTL YL PE+      
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRXXLCGTLDYLPPEMIEGRMH 186
Query: 514 TTSTDVYSYGILMLEVACGRRSIE 537
               D++S G+L  E   G+   E
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPPFE 210

>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306

Iteration: 1
 Score = 76.6 bits (187), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 56/204 (27%), Positives = 93/204 (45%), Gaps = 16/204 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRI--GHNSQQGMK-EFVAEIMSMGRLRHRNLVQLHG 394
           +G G FG VY          +A+K +      + G++ +   E+     LRH N+++L+G
Sbjct: 42  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 395 WCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIG-IAQSLLYLHEECN 453
           +      + L+ +Y P G+                  +QR    I  +A +L Y H   +
Sbjct: 102 YFHDATRVYLILEYAPLGTVYRELQKLSKFD------EQRTATYITELANALSYCH---S 152
Query: 454 QRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKA 513
           +RV+HRD+KP N+LL +    K+ DFG +    H  + +   + GTL YL PE+      
Sbjct: 153 KRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRDDLCGTLDYLPPEMIEGRMH 209
Query: 514 TTSTDVYSYGILMLEVACGRRSIE 537
               D++S G+L  E   G+   E
Sbjct: 210 DEKVDLWSLGVLCYEFLVGKPPFE 233

>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 76.6 bits (187), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 61/208 (29%), Positives = 105/208 (50%), Gaps = 16/208 (7%)
Query: 335 QNLVGSGGFGRVYRGLMPSLG---LEVAIK--RIGHNSQQGMKEFVAEIMSMGRLRHRNL 389
           + ++GSG  G V  G +   G   + VAIK  + G+  +Q  ++F++E   MG+  H N+
Sbjct: 54  EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQ-RRDFLSEASIMGQFDHPNI 112
Query: 390 VQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLH 449
           ++L G   +    ++V +Y+ NGS                T  Q   +L G+   + YL 
Sbjct: 113 IRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQF----TIMQLVGMLRGVGAGMRYL- 167
Query: 450 EECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLG--YLAPEL 507
              +   VHRD+   N+L+D+ L  K+ DFGL+++ E   +   T   G +   + APE 
Sbjct: 168 --SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEA 225
Query: 508 TRTGKATTSTDVYSYGILMLEV-ACGRR 534
                 ++++DV+S+G++M EV A G R
Sbjct: 226 IAFRTFSSASDVWSFGVVMWEVLAYGER 253

>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283

Iteration: 1
 Score = 76.6 bits (187), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 56/204 (27%), Positives = 93/204 (45%), Gaps = 16/204 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRI--GHNSQQGMK-EFVAEIMSMGRLRHRNLVQLHG 394
           +G G FG VY          +A+K +      + G++ +   E+     LRH N+++L+G
Sbjct: 19  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 395 WCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIG-IAQSLLYLHEECN 453
           +      + L+ +Y P G+                  +QR    I  +A +L Y H   +
Sbjct: 79  YFHDATRVYLILEYAPLGTVYRELQKLSKFD------EQRTATYITELANALSYCH---S 129
Query: 454 QRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKA 513
           +RV+HRD+KP N+LL +    K+ DFG +    H  + +   + GTL YL PE+      
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRAALCGTLDYLPPEMIEGRMH 186
Query: 514 TTSTDVYSYGILMLEVACGRRSIE 537
               D++S G+L  E   G+   E
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPPFE 210

>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282

Iteration: 1
 Score = 76.6 bits (187), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 56/204 (27%), Positives = 94/204 (46%), Gaps = 16/204 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRI--GHNSQQGMK-EFVAEIMSMGRLRHRNLVQLHG 394
           +G G FG VY          +A+K +      + G++ +   E+     LRH N+++L+G
Sbjct: 18  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 395 WCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIG-IAQSLLYLHEECN 453
           +      + L+ +Y P G+                  +QR    I  +A +L Y H   +
Sbjct: 78  YFHDATRVYLILEYAPLGTVYRELQKLSKFD------EQRTATYITELANALSYCH---S 128
Query: 454 QRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKA 513
           +RV+HRD+KP N+LL +    K+ +FG +    H  + + T + GTL YL PE+      
Sbjct: 129 KRVIHRDIKPENLLLGSAGELKIANFGWSV---HAPSSRRTTLCGTLDYLPPEMIEGRMH 185
Query: 514 TTSTDVYSYGILMLEVACGRRSIE 537
               D++S G+L  E   G+   E
Sbjct: 186 DEKVDLWSLGVLCYEFLVGKPPFE 209

>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272

Iteration: 1
 Score = 76.6 bits (187), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 56/204 (27%), Positives = 94/204 (46%), Gaps = 16/204 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRI--GHNSQQGMK-EFVAEIMSMGRLRHRNLVQLHG 394
           +G G FG VY          +A+K +      + G++ +   E+     LRH N+++L+G
Sbjct: 19  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 395 WCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIG-IAQSLLYLHEECN 453
           +      + L+ +Y P G+                  +QR    I  +A +L Y H   +
Sbjct: 79  YFHDATRVYLILEYAPLGTVYRELQKLSKFD------EQRTATYITELANALSYCH---S 129
Query: 454 QRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKA 513
           +RV+HRD+KP N+LL +    K+ +FG +    H  + + T + GTL YL PE+      
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIANFGWSV---HAPSSRRTTLCGTLDYLPPEMIEGRMH 186
Query: 514 TTSTDVYSYGILMLEVACGRRSIE 537
               D++S G+L  E   G+   E
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPPFE 210

>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279

Iteration: 1
 Score = 76.3 bits (186), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 56/204 (27%), Positives = 93/204 (45%), Gaps = 16/204 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRI--GHNSQQGMK-EFVAEIMSMGRLRHRNLVQLHG 394
           +G G FG VY          +A+K +      + G++ +   E+     LRH N+++L+G
Sbjct: 17  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 395 WCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIG-IAQSLLYLHEECN 453
           +      + L+ +Y P G+                  +QR    I  +A +L Y H   +
Sbjct: 77  YFHDATRVYLILEYAPLGTVYRELQKLSKFD------EQRTATYITELANALSYCH---S 127
Query: 454 QRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKA 513
           +RV+HRD+KP N+LL +    K+ DFG +    H  + +   + GTL YL PE+      
Sbjct: 128 KRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRDTLCGTLDYLPPEMIEGRMH 184
Query: 514 TTSTDVYSYGILMLEVACGRRSIE 537
               D++S G+L  E   G+   E
Sbjct: 185 DEKVDLWSLGVLCYEFLVGKPPFE 208

>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299

Iteration: 1
 Score = 76.3 bits (186), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 17/206 (8%)
Query: 338 VGSGGFGRVYRGLMPSLGLE-----VAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQL 392
           +G G FG+V+     +L  E     VA+K +   S    K+F  E   +  L+H ++V+ 
Sbjct: 21  LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 393 HGWCRKQDELLLVYDYVPNGSXXX--------XXXXXXXXXXXXXTWDQRYKILIGIAQS 444
           +G C + D L++V++Y+ +G                         T  Q   I   IA  
Sbjct: 81  YGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAG 140
Query: 445 LLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IYEHGANPQTTHIVGTLGYL 503
           ++YL    +Q  VHRD+   N L+   L  K+GDFG+++ +Y         H +  + ++
Sbjct: 141 MVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWM 197
Query: 504 APELTRTGKATTSTDVYSYGILMLEV 529
            PE     K TT +DV+S G+++ E+
Sbjct: 198 PPESIMYRKFTTESDVWSLGVVLWEI 223

>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299

Iteration: 1
 Score = 76.3 bits (186), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 109/213 (51%), Gaps = 14/213 (6%)
Query: 330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQ-QGMKEF-VAEIMSMGRLRHR 387
           + F +   +G G +G VY+      G  VA+K+I  +++ +G+    + EI  +  L H 
Sbjct: 3   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 388 NLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
           N+V+L      +++L LV++++                         +++L G++    +
Sbjct: 63  NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLS----F 118
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQT-THIVGTLGYLAPE 506
            H   + RV+HRD+KP N+L++T    KL DFGLA+ +  G   +T TH V TL Y APE
Sbjct: 119 CH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPE 173
Query: 507 LTRTGK-ATTSTDVYSYGILMLEVACGRRSIEP 538
           +    K  +T+ D++S G +  E+   RR++ P
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFP 205

>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284

Iteration: 1
 Score = 76.3 bits (186), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 64/231 (27%), Positives = 106/231 (45%), Gaps = 31/231 (13%)
Query: 309 EDWEIQCGARRFKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIK--RIGHN 366
           +DWEI  G           +T G      +GSG FG VY+G       +VA+K   +   
Sbjct: 6   DDWEIPDG----------QITVG----QRIGSGSFGTVYKGKWHG---DVAVKMLNVTAP 48
Query: 367 SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXX 426
           + Q ++ F  E+  + + RH N++   G+  K  +L +V  +    S             
Sbjct: 49  TPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFE 107
Query: 427 XXXTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE 486
                D    I    AQ + YLH +    ++HRD+K +NI L   L  K+GDFGLA +  
Sbjct: 108 MIKLID----IARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKS 160
Query: 487 H-GANPQTTHIVGTLGYLAPELTRTGKA---TTSTDVYSYGILMLEVACGR 533
               + Q   + G++ ++APE+ R       +  +DVY++GI++ E+  G+
Sbjct: 161 RWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 211

>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268

Iteration: 1
 Score = 76.3 bits (186), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 93/195 (47%), Gaps = 15/195 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +GSG FG V  G       +VA+K I   S     EF  E  +M +L H  LV+ +G C 
Sbjct: 16  LGSGQFGVVKLGKWKG-QYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCS 73
Query: 398 KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQRVV 457
           K+  + +V +Y+ NG                   +  Y +  G+A    +L    + + +
Sbjct: 74  KEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMA----FLE---SHQFI 126
Query: 458 HRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGT---LGYLAPELTRTGKAT 514
           HRD+   N L+D  L  K+ DFG+ +   +  + Q    VGT   + + APE+    K +
Sbjct: 127 HRDLAARNCLVDRDLCVKVSDFGMTR---YVLDDQYVSSVGTKFPVKWSAPEVFHYFKYS 183
Query: 515 TSTDVYSYGILMLEV 529
           + +DV+++GILM EV
Sbjct: 184 SKSDVWAFGILMWEV 198

>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound Length = 279

Iteration: 1
 Score = 76.3 bits (186), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 98/206 (47%), Gaps = 22/206 (10%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKE--FVAEIMSMGRLRHRNLVQLHGW 395
           +G+G +GR  +    S G  +  K + + S    ++   V+E+  +  L+H N+V+ +  
Sbjct: 14  IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 396 C--RKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRY---KILIGIAQSLLYLHE 450
              R    L +V +Y   G                 T +++Y   + ++ +   L    +
Sbjct: 74  IIDRTNTTLYIVMEYCEGGDLASVITKG--------TKERQYLDEEFVLRVMTQLTLALK 125
Query: 451 ECNQR------VVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLA 504
           EC++R      V+HRD+KP+N+ LD   N KLGDFGLA+I  H  +   T  VGT  Y++
Sbjct: 126 ECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKT-FVGTPYYMS 184
Query: 505 PELTRTGKATTSTDVYSYGILMLEVA 530
           PE          +D++S G L+ E+ 
Sbjct: 185 PEQMNRMSYNEKSDIWSLGCLLYELC 210

>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302

Iteration: 1
 Score = 75.9 bits (185), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 108/213 (50%), Gaps = 14/213 (6%)
Query: 330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQ-QGMKEF-VAEIMSMGRLRHR 387
           + F +   +G G +G VY+      G  VA+K+I  +++ +G+    + EI  +  L H 
Sbjct: 6   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 388 NLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
           N+V+L      +++L LV+++V                         +++L G+A    +
Sbjct: 66  NIVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA----F 121
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQT-THIVGTLGYLAPE 506
            H   + RV+HRD+KP N+L++T    KL DFGLA+ +  G   +T  H V TL Y APE
Sbjct: 122 CH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPE 176
Query: 507 LTRTGK-ATTSTDVYSYGILMLEVACGRRSIEP 538
           +    K  +T+ D++S G +  E+   RR++ P
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFP 208

>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281

Iteration: 1
 Score = 75.9 bits (185), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 64/231 (27%), Positives = 106/231 (45%), Gaps = 31/231 (13%)
Query: 309 EDWEIQCGARRFKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIK--RIGHN 366
           +DWEI  G           +T G      +GSG FG VY+G       +VA+K   +   
Sbjct: 6   DDWEIPDG----------QITVG----QRIGSGSFGTVYKGKWHG---DVAVKMLNVTAP 48
Query: 367 SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXX 426
           + Q ++ F  E+  + + RH N++   G+  K  +L +V  +    S             
Sbjct: 49  TPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFE 107
Query: 427 XXXTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE 486
                D    I    AQ + YLH +    ++HRD+K +NI L   L  K+GDFGLA +  
Sbjct: 108 MIKLID----IARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKS 160
Query: 487 H-GANPQTTHIVGTLGYLAPELTRTGKA---TTSTDVYSYGILMLEVACGR 533
               + Q   + G++ ++APE+ R       +  +DVY++GI++ E+  G+
Sbjct: 161 RWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 211

>pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275

Iteration: 1
 Score = 75.9 bits (185), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 64/231 (27%), Positives = 106/231 (45%), Gaps = 31/231 (13%)
Query: 309 EDWEIQCGARRFKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIK--RIGHN 366
           +DWEI  G           +T G      +GSG FG VY+G       +VA+K   +   
Sbjct: 1   DDWEIPDG----------QITVG----QRIGSGSFGTVYKGKWHG---DVAVKMLNVTAP 43
Query: 367 SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXX 426
           + Q ++ F  E+  + + RH N++   G+  K  +L +V  +    S             
Sbjct: 44  TPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFE 102
Query: 427 XXXTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE 486
                D    I    AQ + YLH +    ++HRD+K +NI L   L  K+GDFGLA +  
Sbjct: 103 MIKLID----IARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKS 155
Query: 487 H-GANPQTTHIVGTLGYLAPELTRTGKA---TTSTDVYSYGILMLEVACGR 533
               + Q   + G++ ++APE+ R       +  +DVY++GI++ E+  G+
Sbjct: 156 RWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 206

>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282

Iteration: 1
 Score = 75.9 bits (185), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 64/231 (27%), Positives = 106/231 (45%), Gaps = 31/231 (13%)
Query: 309 EDWEIQCGARRFKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIK--RIGHN 366
           +DWEI  G           +T G      +GSG FG VY+G       +VA+K   +   
Sbjct: 3   DDWEIPDG----------QITVG----QRIGSGSFGTVYKGKWHG---DVAVKMLNVTAP 45
Query: 367 SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXX 426
           + Q ++ F  E+  + + RH N++   G+  K  +L +V  +    S             
Sbjct: 46  TPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFE 104
Query: 427 XXXTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE 486
                D    I    AQ + YLH +    ++HRD+K +NI L   L  K+GDFGLA +  
Sbjct: 105 MIKLID----IARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKS 157
Query: 487 H-GANPQTTHIVGTLGYLAPELTRTGKA---TTSTDVYSYGILMLEVACGR 533
               + Q   + G++ ++APE+ R       +  +DVY++GI++ E+  G+
Sbjct: 158 RWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 208

>pdb|3IPV|A Chain A, Crystal Structure Of Spatholobus Parviflorus Seed Lectin Length = 251

Iteration: 1
 Score = 75.9 bits (185), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 72/253 (28%), Positives = 111/253 (43%), Gaps = 31/253 (12%)
Query: 6   ADTTSFLYNGF--LHANLSLEGAAYISTSGILTVTNKSE------GLIGHALYPNPLRFK 57
           A+ TSF+++ F  L  NL L+G A ++ +G+L +TN  +        +G A Y  P+   
Sbjct: 1   AEETSFVFSKFKPLEPNLILQGDALVTVAGVLQLTNVDKNGVPEPSSLGRATYSAPINIW 60
Query: 58  TSNKSVAIDFRTNFVFSILPKYPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSST 117
            S   +   F T+F F+I          GLAF +       +     FLGL +  +S ST
Sbjct: 61  DSATGLVASFATSFRFTIYAPNIATIADGLAFFLAPVASAPDS-GGGFLGLFDSAVSGST 119
Query: 118 KFSTRMLAVEFDIIQNTELIDINDNHVGIDXXXXXXXXXXXXXYYSGNNHRIPILLRSGD 177
               + +AVEFD  +NT   D    H+G D                     +   L +G+
Sbjct: 120 Y---QTVAVEFDTYENTVFTDPPYTHIGFDVNSISSI------------KTVKWSLANGE 164
Query: 178 PIQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPI-DLSSVIDEYMYTGFSASTGLITA 236
             +  + Y+S   L+   +  L  P      I   I DLSSV+ E++  GFSA+TG    
Sbjct: 165 AAKVLITYNSAVKLL---VASLVYPSSKTSFILADIVDLSSVLPEWVRVGFSAATGASGG 221
Query: 237 ---SHNVHGWSIS 246
              +H+V  WS +
Sbjct: 222 KIETHDVFSWSFA 234

>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268

Iteration: 1
 Score = 75.9 bits (185), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 94/204 (46%), Gaps = 16/204 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRI--GHNSQQGMK-EFVAEIMSMGRLRHRNLVQLHG 394
           +G G FG VY     +    +A+K +      + G++ +   E+     LRH N+++L+G
Sbjct: 16  LGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 395 WCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIG-IAQSLLYLHEECN 453
           +      + L+ +Y P G+                  +QR    I  +A +L Y H   +
Sbjct: 76  YFHDSTRVYLILEYAPLGTVYRELQKLSKFD------EQRTATYITELANALSYCH---S 126
Query: 454 QRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKA 513
           ++V+HRD+KP N+LL +    K+ DFG +    H  + +   + GTL YL PE+      
Sbjct: 127 KKVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRAALCGTLDYLPPEMIEGRMH 183
Query: 514 TTSTDVYSYGILMLEVACGRRSIE 537
               D++S G+L  E   G+   E
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFE 207

>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267

Iteration: 1
 Score = 75.9 bits (185), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 92/192 (47%), Gaps = 9/192 (4%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +GSG FG V+ G   +   +VAIK I   +    ++F+ E   M +L H  LVQL+G C 
Sbjct: 16  IGSGQFGLVHLGYWLNKD-KVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLYGVCL 73
Query: 398 KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQRVV 457
           +Q  + LV +++ +G                   +    + + + + + YL E C   V+
Sbjct: 74  EQAPICLVTEFMEHGCLSDYLRTQRGLFAA----ETLLGMCLDVCEGMAYLEEAC---VI 126
Query: 458 HRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTST 517
           HRD+   N L+      K+ DFG+ +         +T     + + +PE+    + ++ +
Sbjct: 127 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 186
Query: 518 DVYSYGILMLEV 529
           DV+S+G+LM EV
Sbjct: 187 DVWSFGVLMWEV 198

>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306

Iteration: 1
 Score = 75.9 bits (185), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 64/231 (27%), Positives = 106/231 (45%), Gaps = 31/231 (13%)
Query: 309 EDWEIQCGARRFKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIK--RIGHN 366
           +DWEI  G           +T G      +GSG FG VY+G       +VA+K   +   
Sbjct: 28  DDWEIPDG----------QITVG----QRIGSGSFGTVYKGKWHG---DVAVKMLNVTAP 70
Query: 367 SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXX 426
           + Q ++ F  E+  + + RH N++   G+  K  +L +V  +    S             
Sbjct: 71  TPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFE 129
Query: 427 XXXTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE 486
                D    I    AQ + YLH +    ++HRD+K +NI L   L  K+GDFGLA +  
Sbjct: 130 MIKLID----IARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKS 182
Query: 487 H-GANPQTTHIVGTLGYLAPELTRTGKA---TTSTDVYSYGILMLEVACGR 533
               + Q   + G++ ++APE+ R       +  +DVY++GI++ E+  G+
Sbjct: 183 RWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 233

>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307

Iteration: 1
 Score = 75.5 bits (184), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 64/231 (27%), Positives = 106/231 (45%), Gaps = 31/231 (13%)
Query: 309 EDWEIQCGARRFKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIK--RIGHN 366
           +DWEI  G           +T G      +GSG FG VY+G       +VA+K   +   
Sbjct: 29  DDWEIPDG----------QITVG----QRIGSGSFGTVYKGKWHG---DVAVKMLNVTAP 71
Query: 367 SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXX 426
           + Q ++ F  E+  + + RH N++   G+  K  +L +V  +    S             
Sbjct: 72  TPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFE 130
Query: 427 XXXTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE 486
                D    I    AQ + YLH +    ++HRD+K +NI L   L  K+GDFGLA +  
Sbjct: 131 MIKLID----IARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKS 183
Query: 487 H-GANPQTTHIVGTLGYLAPELTRTGKA---TTSTDVYSYGILMLEVACGR 533
               + Q   + G++ ++APE+ R       +  +DVY++GI++ E+  G+
Sbjct: 184 RWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 234

>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272

Iteration: 1
 Score = 75.5 bits (184), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 56/199 (28%), Positives = 92/199 (46%), Gaps = 16/199 (8%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMK-EFVAEIMSMGRLRHRNLVQLHG 394
           +G G FG VY          +A+K +      + G++ +   E+     LRH N+++L+G
Sbjct: 20  LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 395 WCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIG-IAQSLLYLHEECN 453
           +      + L+ +Y P G+                  +QR    I  +A +L Y H   +
Sbjct: 80  YFHDATRVYLILEYAPLGTVYRELQKLSRFD------EQRTATYITELANALSYCH---S 130
Query: 454 QRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKA 513
           +RV+HRD+KP N+LL +    K+ DFG +    H  + + T + GTL YL PE+      
Sbjct: 131 KRVIHRDIKPENLLLGSNGELKIADFGWSV---HAPSSRRTTLCGTLDYLPPEMIEGRMH 187
Query: 514 TTSTDVYSYGILMLEVACG 532
               D++S G+L  E   G
Sbjct: 188 DEKVDLWSLGVLCYEFLVG 206

>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297

Iteration: 1
 Score = 75.5 bits (184), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 108/213 (50%), Gaps = 14/213 (6%)
Query: 330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQ-QGMKEF-VAEIMSMGRLRHR 387
           + F +   +G G +G VY+      G  VA+K+I  +++ +G+    + EI  +  L H 
Sbjct: 3   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 388 NLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
           N+V+L      +++L LV++++                         +++L G+A    +
Sbjct: 63  NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA----F 118
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQT-THIVGTLGYLAPE 506
            H   + RV+HRD+KP N+L++T    KL DFGLA+ +  G   +T  H V TL Y APE
Sbjct: 119 CH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPE 173
Query: 507 LTRTGK-ATTSTDVYSYGILMLEVACGRRSIEP 538
           +    K  +T+ D++S G +  E+   RR++ P
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFP 205

>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289

Iteration: 1
 Score = 75.5 bits (184), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 108/213 (50%), Gaps = 14/213 (6%)
Query: 330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQ-QGMKEF-VAEIMSMGRLRHR 387
           + F +   +G G +G VY+      G  VA+K+I  +++ +G+    + EI  +  L H 
Sbjct: 3   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 388 NLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
           N+V+L      +++L LV++++                         +++L G+A    +
Sbjct: 63  NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA----F 118
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQT-THIVGTLGYLAPE 506
            H   + RV+HRD+KP N+L++T    KL DFGLA+ +  G   +T  H V TL Y APE
Sbjct: 119 CH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPE 173
Query: 507 LTRTGK-ATTSTDVYSYGILMLEVACGRRSIEP 538
           +    K  +T+ D++S G +  E+   RR++ P
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFP 205

>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296

Iteration: 1
 Score = 75.5 bits (184), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 108/213 (50%), Gaps = 14/213 (6%)
Query: 330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQ-QGMKEF-VAEIMSMGRLRHR 387
           + F +   +G G +G VY+      G  VA+K+I  +++ +G+    + EI  +  L H 
Sbjct: 2   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 388 NLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
           N+V+L      +++L LV++++                         +++L G+A    +
Sbjct: 62  NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA----F 117
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQT-THIVGTLGYLAPE 506
            H   + RV+HRD+KP N+L++T    KL DFGLA+ +  G   +T  H V TL Y APE
Sbjct: 118 CH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPE 172
Query: 507 LTRTGK-ATTSTDVYSYGILMLEVACGRRSIEP 538
           +    K  +T+ D++S G +  E+   RR++ P
Sbjct: 173 ILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFP 204

>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299

Iteration: 1
 Score = 75.5 bits (184), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 108/213 (50%), Gaps = 14/213 (6%)
Query: 330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQ-QGMKEF-VAEIMSMGRLRHR 387
           + F +   +G G +G VY+      G  VA+K+I  +++ +G+    + EI  +  L H 
Sbjct: 3   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 388 NLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
           N+V+L      +++L LV++++                         +++L G+A    +
Sbjct: 63  NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA----F 118
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQT-THIVGTLGYLAPE 506
            H   + RV+HRD+KP N+L++T    KL DFGLA+ +  G   +T  H V TL Y APE
Sbjct: 119 CH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPE 173
Query: 507 LTRTGK-ATTSTDVYSYGILMLEVACGRRSIEP 538
           +    K  +T+ D++S G +  E+   RR++ P
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFP 205

>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267

Iteration: 1
 Score = 75.5 bits (184), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 101/209 (48%), Gaps = 9/209 (4%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +G+G FG V+ G       +VA+K +   S      F+AE   M +L+H+ LV+L+    
Sbjct: 17  LGAGQFGEVWMGYYNG-HTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYA-VV 73
Query: 398 KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQRVV 457
            Q+ + ++ +Y+ NGS                T ++   +   IA+ + ++ E   +  +
Sbjct: 74  TQEPIYIITEYMENGSLVDFLKTPSGIKL---TINKLLDMAAQIAEGMAFIEE---RNYI 127
Query: 458 HRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTST 517
           HR+++ +NIL+   L+ K+ DFGLA++ E             + + APE    G  T  +
Sbjct: 128 HRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 187
Query: 518 DVYSYGILMLEVACGRRSIEPQKAAAELL 546
           DV+S+GIL+ E+    R   P     E++
Sbjct: 188 DVWSFGILLTEIVTHGRIPYPGMTNPEVI 216

>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298

Iteration: 1
 Score = 75.5 bits (184), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 108/213 (50%), Gaps = 14/213 (6%)
Query: 330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQ-QGMKEF-VAEIMSMGRLRHR 387
           + F +   +G G +G VY+      G  VA+K+I  +++ +G+    + EI  +  L H 
Sbjct: 2   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 388 NLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
           N+V+L      +++L LV++++                         +++L G+A    +
Sbjct: 62  NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA----F 117
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQT-THIVGTLGYLAPE 506
            H   + RV+HRD+KP N+L++T    KL DFGLA+ +  G   +T  H V TL Y APE
Sbjct: 118 CH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPE 172
Query: 507 LTRTGK-ATTSTDVYSYGILMLEVACGRRSIEP 538
           +    K  +T+ D++S G +  E+   RR++ P
Sbjct: 173 ILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFP 204

>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300

Iteration: 1
 Score = 75.5 bits (184), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 108/213 (50%), Gaps = 14/213 (6%)
Query: 330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQ-QGMKEF-VAEIMSMGRLRHR 387
           + F +   +G G +G VY+      G  VA+K+I  +++ +G+    + EI  +  L H 
Sbjct: 4   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 388 NLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
           N+V+L      +++L LV++++                         +++L G+A    +
Sbjct: 64  NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA----F 119
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQT-THIVGTLGYLAPE 506
            H   + RV+HRD+KP N+L++T    KL DFGLA+ +  G   +T  H V TL Y APE
Sbjct: 120 CH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPE 174
Query: 507 LTRTGK-ATTSTDVYSYGILMLEVACGRRSIEP 538
           +    K  +T+ D++S G +  E+   RR++ P
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFP 206

>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298

Iteration: 1
 Score = 75.5 bits (184), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 108/213 (50%), Gaps = 14/213 (6%)
Query: 330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQ-QGMKE-FVAEIMSMGRLRHR 387
           + F +   +G G +G VY+      G  VA+K+I  +++ +G+    + EI  +  L H 
Sbjct: 3   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 388 NLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
           N+V+L      +++L LV++++                         +++L G+A    +
Sbjct: 63  NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA----F 118
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQT-THIVGTLGYLAPE 506
            H   + RV+HRD+KP N+L++T    KL DFGLA+ +  G   +T  H V TL Y APE
Sbjct: 119 CH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPE 173
Query: 507 LTRTGK-ATTSTDVYSYGILMLEVACGRRSIEP 538
           +    K  +T+ D++S G +  E+   RR++ P
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFP 205

>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299

Iteration: 1
 Score = 75.5 bits (184), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 108/213 (50%), Gaps = 14/213 (6%)
Query: 330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQ-QGMKEF-VAEIMSMGRLRHR 387
           + F +   +G G +G VY+      G  VA+ +I  +++ +G+    + EI  +  L H 
Sbjct: 3   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 388 NLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
           N+V+L      +++L LV++++                         +++L G+A    +
Sbjct: 63  NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA----F 118
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQT-THIVGTLGYLAPE 506
            H   + RV+HRD+KP N+L++T    KL DFGLA+ +  G   +T TH V TL Y APE
Sbjct: 119 CH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPE 173
Query: 507 LTRTGK-ATTSTDVYSYGILMLEVACGRRSIEP 538
           +    K  +T+ D++S G +  E+   RR++ P
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFP 205

>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 75.5 bits (184), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 108/213 (50%), Gaps = 14/213 (6%)
Query: 330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQ-QGMKEF-VAEIMSMGRLRHR 387
           + F +   +G G +G VY+      G  VA+ +I  +++ +G+    + EI  +  L H 
Sbjct: 2   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 388 NLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
           N+V+L      +++L LV++++                         +++L G+A    +
Sbjct: 62  NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA----F 117
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQT-THIVGTLGYLAPE 506
            H   + RV+HRD+KP N+L++T    KL DFGLA+ +  G   +T TH V TL Y APE
Sbjct: 118 CH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPE 172
Query: 507 LTRTGK-ATTSTDVYSYGILMLEVACGRRSIEP 538
           +    K  +T+ D++S G +  E+   RR++ P
Sbjct: 173 ILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFP 204

>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 108/213 (50%), Gaps = 14/213 (6%)
Query: 330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQ-QGMKEF-VAEIMSMGRLRHR 387
           + F +   +G G +G VY+      G  VA+K+I  +++ +G+    + EI  +  L H 
Sbjct: 4   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 388 NLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
           N+V+L      +++L LV++++                         +++L G+A    +
Sbjct: 64  NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA----F 119
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQT-THIVGTLGYLAPE 506
            H   + RV+HRD+KP N+L++T    KL DFGLA+ +  G   +T  H V TL Y APE
Sbjct: 120 CH---SHRVLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPE 174
Query: 507 LTRTGK-ATTSTDVYSYGILMLEVACGRRSIEP 538
           +    K  +T+ D++S G +  E+   RR++ P
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFP 206

>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 108/213 (50%), Gaps = 14/213 (6%)
Query: 330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQ-QGMKEF-VAEIMSMGRLRHR 387
           + F +   +G G +G VY+      G  VA+K+I  +++ +G+    + EI  +  L H 
Sbjct: 3   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 388 NLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
           N+V+L      +++L LV++++                         +++L G+A    +
Sbjct: 63  NIVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLA----F 118
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQT-THIVGTLGYLAPE 506
            H   + RV+HRD+KP N+L++T    KL DFGLA+ +  G   +T  H V TL Y APE
Sbjct: 119 CH---SHRVLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPE 173
Query: 507 LTRTGK-ATTSTDVYSYGILMLEVACGRRSIEP 538
           +    K  +T+ D++S G +  E+   RR++ P
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFP 205

>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 108/213 (50%), Gaps = 14/213 (6%)
Query: 330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQ-QGMKEF-VAEIMSMGRLRHR 387
           + F +   +G G +G VY+      G  VA+K+I  +++ +G+    + EI  +  L H 
Sbjct: 6   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 388 NLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
           N+V+L      +++L LV++++                         +++L G+A    +
Sbjct: 66  NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA----F 121
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQT-THIVGTLGYLAPE 506
            H   + RV+HRD+KP N+L++T    KL DFGLA+ +  G   +T  H V TL Y APE
Sbjct: 122 CH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPE 176
Query: 507 LTRTGK-ATTSTDVYSYGILMLEVACGRRSIEP 538
           +    K  +T+ D++S G +  E+   RR++ P
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFP 208

>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 108/213 (50%), Gaps = 14/213 (6%)
Query: 330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQ-QGMKEF-VAEIMSMGRLRHR 387
           + F +   +G G +G VY+      G  VA+K+I  +++ +G+    + EI  +  L H 
Sbjct: 5   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 388 NLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
           N+V+L      +++L LV++++                         +++L G+A    +
Sbjct: 65  NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA----F 120
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQT-THIVGTLGYLAPE 506
            H   + RV+HRD+KP N+L++T    KL DFGLA+ +  G   +T  H V TL Y APE
Sbjct: 121 CH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPE 175
Query: 507 LTRTGK-ATTSTDVYSYGILMLEVACGRRSIEP 538
           +    K  +T+ D++S G +  E+   RR++ P
Sbjct: 176 ILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFP 207

>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 108/213 (50%), Gaps = 14/213 (6%)
Query: 330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQ-QGMKEF-VAEIMSMGRLRHR 387
           + F +   +G G +G VY+      G  VA+K+I  +++ +G+    + EI  +  L H 
Sbjct: 5   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 388 NLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
           N+V+L      +++L LV++++                         +++L G+A    +
Sbjct: 65  NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA----F 120
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQT-THIVGTLGYLAPE 506
            H   + RV+HRD+KP N+L++T    KL DFGLA+ +  G   +T  H V TL Y APE
Sbjct: 121 CH---SHRVLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPE 175
Query: 507 LTRTGK-ATTSTDVYSYGILMLEVACGRRSIEP 538
           +    K  +T+ D++S G +  E+   RR++ P
Sbjct: 176 ILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFP 207

>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 108/213 (50%), Gaps = 14/213 (6%)
Query: 330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQ-QGMKEF-VAEIMSMGRLRHR 387
           + F +   +G G +G VY+      G  VA+K+I  +++ +G+    + EI  +  L H 
Sbjct: 4   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 388 NLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
           N+V+L      +++L LV++++                         +++L G+A    +
Sbjct: 64  NIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLA----F 119
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQT-THIVGTLGYLAPE 506
            H   + RV+HRD+KP N+L++T    KL DFGLA+ +  G   +T  H V TL Y APE
Sbjct: 120 CH---SHRVLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPE 174
Query: 507 LTRTGK-ATTSTDVYSYGILMLEVACGRRSIEP 538
           +    K  +T+ D++S G +  E+   RR++ P
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFP 206

>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 108/213 (50%), Gaps = 14/213 (6%)
Query: 330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQ-QGMKEF-VAEIMSMGRLRHR 387
           + F +   +G G +G VY+      G  VA+K+I  +++ +G+    + EI  +  L H 
Sbjct: 6   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 388 NLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
           N+V+L      +++L LV++++                         +++L G+A    +
Sbjct: 66  NIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLA----F 121
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQT-THIVGTLGYLAPE 506
            H   + RV+HRD+KP N+L++T    KL DFGLA+ +  G   +T  H V TL Y APE
Sbjct: 122 CH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPE 176
Query: 507 LTRTGK-ATTSTDVYSYGILMLEVACGRRSIEP 538
           +    K  +T+ D++S G +  E+   RR++ P
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFP 208

>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 108/213 (50%), Gaps = 14/213 (6%)
Query: 330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQ-QGMKE-FVAEIMSMGRLRHR 387
           + F +   +G G +G VY+      G  VA+K+I  +++ +G+    + EI  +  L H 
Sbjct: 7   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 388 NLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
           N+V+L      +++L LV++++                         +++L G+A    +
Sbjct: 67  NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA----F 122
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQT-THIVGTLGYLAPE 506
            H   + RV+HRD+KP N+L++T    KL DFGLA+ +  G   +T  H V TL Y APE
Sbjct: 123 CH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPE 177
Query: 507 LTRTGK-ATTSTDVYSYGILMLEVACGRRSIEP 538
           +    K  +T+ D++S G +  E+   RR++ P
Sbjct: 178 ILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFP 209

>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 108/213 (50%), Gaps = 14/213 (6%)
Query: 330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQ-QGMKEF-VAEIMSMGRLRHR 387
           + F +   +G G +G VY+      G  VA+K+I  +++ +G+    + EI  +  L H 
Sbjct: 6   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 388 NLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
           N+V+L      +++L LV++++                         +++L G+A    +
Sbjct: 66  NIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLA----F 121
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQT-THIVGTLGYLAPE 506
            H   + RV+HRD+KP N+L++T    KL DFGLA+ +  G   +T  H V TL Y APE
Sbjct: 122 CH---SHRVLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPE 176
Query: 507 LTRTGK-ATTSTDVYSYGILMLEVACGRRSIEP 538
           +    K  +T+ D++S G +  E+   RR++ P
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFP 208

>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 108/213 (50%), Gaps = 14/213 (6%)
Query: 330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQ-QGMKEF-VAEIMSMGRLRHR 387
           + F +   +G G +G VY+      G  VA+K+I  +++ +G+    + EI  +  L H 
Sbjct: 4   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 388 NLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
           N+V+L      +++L LV++++                         +++L G+A    +
Sbjct: 64  NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA----F 119
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQT-THIVGTLGYLAPE 506
            H   + RV+HRD+KP N+L++T    KL DFGLA+ +  G   +T  H V TL Y APE
Sbjct: 120 CH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPE 174
Query: 507 LTRTGK-ATTSTDVYSYGILMLEVACGRRSIEP 538
           +    K  +T+ D++S G +  E+   RR++ P
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFP 206

>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 108/213 (50%), Gaps = 14/213 (6%)
Query: 330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQ-QGMKEF-VAEIMSMGRLRHR 387
           + F +   +G G +G VY+      G  VA+K+I  +++ +G+    + EI  +  L H 
Sbjct: 5   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 388 NLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
           N+V+L      +++L LV++++                         +++L G+A    +
Sbjct: 65  NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA----F 120
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQT-THIVGTLGYLAPE 506
            H   + RV+HRD+KP N+L++T    KL DFGLA+ +  G   +T  H V TL Y APE
Sbjct: 121 CH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPE 175
Query: 507 LTRTGK-ATTSTDVYSYGILMLEVACGRRSIEP 538
           +    K  +T+ D++S G +  E+   RR++ P
Sbjct: 176 ILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFP 207

>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 108/213 (50%), Gaps = 14/213 (6%)
Query: 330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQ-QGMKEF-VAEIMSMGRLRHR 387
           + F +   +G G +G VY+      G  VA+K+I  +++ +G+    + EI  +  L H 
Sbjct: 6   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 388 NLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
           N+V+L      +++L LV++++                         +++L G+A    +
Sbjct: 66  NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA----F 121
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQT-THIVGTLGYLAPE 506
            H   + RV+HRD+KP N+L++T    KL DFGLA+ +  G   +T  H V TL Y APE
Sbjct: 122 CH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPE 176
Query: 507 LTRTGK-ATTSTDVYSYGILMLEVACGRRSIEP 538
           +    K  +T+ D++S G +  E+   RR++ P
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFP 208

>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 90/195 (46%), Gaps = 10/195 (5%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +G G  G V        G +VA+K++    QQ  +    E++ M    H N+V ++    
Sbjct: 53  IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYL 112
Query: 398 KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQRVV 457
             DEL +V +++  G+                T      + + + ++L YLH   NQ V+
Sbjct: 113 VGDELWVVMEFLEGGALTDIVTHTRMNEEQIAT------VCLSVLRALSYLH---NQGVI 163
Query: 458 HRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTST 517
           HRD+K  +ILL +    KL DFG          P+   +VGT  ++APE+       T  
Sbjct: 164 HRDIKSDSILLTSDGRIKLSDFGFCAQVSKEV-PKRKXLVGTPYWMAPEVISRLPYGTEV 222
Query: 518 DVYSYGILMLEVACG 532
           D++S GI+++E+  G
Sbjct: 223 DIWSLGIMVIEMIDG 237

>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/202 (26%), Positives = 97/202 (48%), Gaps = 16/202 (7%)
Query: 336 NLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMK---EFVAEIMSMGRLRHRNLVQL 392
           + +G G FG+V  G     G +VA+K +     + +    +   EI ++   RH ++++L
Sbjct: 17  DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKL 76
Query: 393 HGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEEC 452
           +       +  +V +YV  G                    +  ++   I  ++ Y H   
Sbjct: 77  YQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEM-----EARRLFQQILSAVDYCH--- 128
Query: 453 NQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGK 512
              VVHRD+KP N+LLD ++NAK+ DFGL+ +   G   +T+   G+  Y APE+  +G+
Sbjct: 129 RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTS--CGSPNYAAPEVI-SGR 185
Query: 513 --ATTSTDVYSYGILMLEVACG 532
             A    D++S G+++  + CG
Sbjct: 186 LYAGPEVDIWSCGVILYALLCG 207

>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 108/213 (50%), Gaps = 14/213 (6%)
Query: 330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQ-QGMKEF-VAEIMSMGRLRHR 387
           + F +   +G G +G VY+      G  VA+K+I  +++ +G+    + EI  +  L H 
Sbjct: 5   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 388 NLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
           N+V+L      +++L LV++++                         +++L G+A    +
Sbjct: 65  NIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLA----F 120
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQT-THIVGTLGYLAPE 506
            H   + RV+HRD+KP N+L++T    KL DFGLA+ +  G   +T  H V TL Y APE
Sbjct: 121 CH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPE 175
Query: 507 LTRTGK-ATTSTDVYSYGILMLEVACGRRSIEP 538
           +    K  +T+ D++S G +  E+   RR++ P
Sbjct: 176 ILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFP 207

>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662 Length = 279

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 97/206 (47%), Gaps = 22/206 (10%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKE--FVAEIMSMGRLRHRNLVQLHGW 395
           +G+G +GR  +    S G  +  K + + S    ++   V+E+  +  L+H N+V+ +  
Sbjct: 14  IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 396 C--RKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRY---KILIGIAQSLLYLHE 450
              R    L +V +Y   G                 T +++Y   + ++ +   L    +
Sbjct: 74  IIDRTNTTLYIVMEYCEGGDLASVITKG--------TKERQYLDEEFVLRVMTQLTLALK 125
Query: 451 ECNQR------VVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLA 504
           EC++R      V+HRD+KP+N+ LD   N KLGDFGLA+I  H  +      VGT  Y++
Sbjct: 126 ECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDED-FAKEFVGTPYYMS 184
Query: 505 PELTRTGKATTSTDVYSYGILMLEVA 530
           PE          +D++S G L+ E+ 
Sbjct: 185 PEQMNRMSYNEKSDIWSLGCLLYELC 210

>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302

Iteration: 1
 Score = 74.7 bits (182), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 108/213 (50%), Gaps = 14/213 (6%)
Query: 330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQ-QGMKEF-VAEIMSMGRLRHR 387
           + F +   +G G +G VY+      G  VA+K+I  +++ +G+    + EI  +  L H 
Sbjct: 6   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 388 NLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
           N+V+L      +++L LV++++                         +++L G+A    +
Sbjct: 66  NIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLA----F 121
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQT-THIVGTLGYLAPE 506
            H   + RV+HRD+KP N+L++T    KL DFGLA+ +  G   +T  H V TL Y APE
Sbjct: 122 CH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPE 176
Query: 507 LTRTGK-ATTSTDVYSYGILMLEVACGRRSIEP 538
           +    K  +T+ D++S G +  E+   RR++ P
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFP 208

>pdb|3IPV|B Chain B, Crystal Structure Of Spatholobus Parviflorus Seed Lectin Length = 239

Iteration: 1
 Score = 74.7 bits (182), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 72/253 (28%), Positives = 112/253 (44%), Gaps = 31/253 (12%)
Query: 6   ADTTSFLYNGF--LHANLSLEGAAYISTSGILTVTN-KSEGL-----IGHALYPNPLRFK 57
           A+ TSF+++ F  L  NL L+G A ++ +G+L +TN  S G+     +G A Y  P+   
Sbjct: 1   AEETSFVFSKFKPLEPNLILQGDALVTVAGVLQLTNVDSNGVPEPSSLGRATYSAPINIW 60
Query: 58  TSNKSVAIDFRTNFVFSILPKYPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSST 117
            S   +   F T+F F+I          GLAF +       +     FLGL +  +  +T
Sbjct: 61  DSATGLVASFATSFRFTIYAPNIATIADGLAFFLAPVASAPDS-GGGFLGLFDSAVGDTT 119
Query: 118 KFSTRMLAVEFDIIQNTELIDINDNHVGIDXXXXXXXXXXXXXYYSGNNHRIPILLRSGD 177
               + +AVEFD  +NT   D    H+G D                     +   L +G+
Sbjct: 120 Y---QTVAVEFDTYENTVFTDPPYTHIGFDVNSISSI------------KTVKWSLANGE 164
Query: 178 PIQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPI-DLSSVIDEYMYTGFSASTGLITA 236
             +  + Y+S   L+   +  L  P      I   I DLSSV+ E++  GFSA+TG    
Sbjct: 165 AAKVLITYNSAVKLL---VASLVYPSSKTSFILADIVDLSSVLPEWVRVGFSAATGASKG 221
Query: 237 ---SHNVHGWSIS 246
              +H+V  WS +
Sbjct: 222 YIETHDVFSWSFA 234

>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk Length = 476

Iteration: 1
 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 53/202 (26%), Positives = 96/202 (47%), Gaps = 16/202 (7%)
Query: 336 NLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMK---EFVAEIMSMGRLRHRNLVQL 392
           + +G G FG+V  G     G +VA+K +     + +    +   EI ++   RH ++++L
Sbjct: 22  DTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKL 81
Query: 393 HGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEEC 452
           +       ++ +V +YV  G                    +  ++   I   + Y H   
Sbjct: 82  YQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEK-----ESRRLFQQILSGVDYCH--- 133
Query: 453 NQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGK 512
              VVHRD+KP N+LLD ++NAK+ DFGL+ +   G   + +   G+  Y APE+  +G+
Sbjct: 134 RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXS--CGSPNYAAPEVI-SGR 190
Query: 513 --ATTSTDVYSYGILMLEVACG 532
             A    D++S G+++  + CG
Sbjct: 191 LYAGPEVDIWSSGVILYALLCG 212

>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 101/209 (48%), Gaps = 9/209 (4%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +G+G  G V+ G   +   +VA+K +   S      F+AE   M +L+H+ LV+L+    
Sbjct: 21  LGAGQAGEVWMGYY-NGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYA-VV 77
Query: 398 KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQRVV 457
            Q+ + ++ +Y+ NGS                T ++   +   IA+ + ++ E   +  +
Sbjct: 78  TQEPIYIITEYMENGSLVDFLKTPSGIKL---TINKLLDMAAQIAEGMAFIEE---RNYI 131
Query: 458 HRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTST 517
           HRD++ +NIL+   L+ K+ DFGLA++ E             + + APE    G  T  +
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 518 DVYSYGILMLEVACGRRSIEPQKAAAELL 546
           DV+S+GIL+ E+    R   P     E++
Sbjct: 192 DVWSFGILLTEIVTHGRIPYPGMTNPEVI 220

>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand Length = 279

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 97/206 (47%), Gaps = 22/206 (10%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKE--FVAEIMSMGRLRHRNLVQLHGW 395
           +G+G +GR  +    S G  +  K + + S    ++   V+E+  +  L+H N+V+ +  
Sbjct: 14  IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 396 C--RKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRY---KILIGIAQSLLYLHE 450
              R    L +V +Y   G                 T +++Y   + ++ +   L    +
Sbjct: 74  IIDRTNTTLYIVMEYCEGGDLASVITKG--------TKERQYLDEEFVLRVMTQLTLALK 125
Query: 451 ECNQR------VVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLA 504
           EC++R      V+HRD+KP+N+ LD   N KLGDFGLA+I  H  +      VGT  Y++
Sbjct: 126 ECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKA-FVGTPYYMS 184
Query: 505 PELTRTGKATTSTDVYSYGILMLEVA 530
           PE          +D++S G L+ E+ 
Sbjct: 185 PEQMNRMSYNEKSDIWSLGCLLYELC 210

>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 64/231 (27%), Positives = 106/231 (45%), Gaps = 31/231 (13%)
Query: 309 EDWEIQCGARRFKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIK--RIGHN 366
           +DWEI  G           +T G      +GSG FG VY+G       +VA+K   +   
Sbjct: 1   DDWEIPDG----------QITVG----QRIGSGSFGTVYKGKWHG---DVAVKMLNVTAP 43
Query: 367 SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXX 426
           + Q ++ F  E+  + + RH N++   G+  K  +L +V  +    S             
Sbjct: 44  TPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFE 102
Query: 427 XXXTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLA-KIY 485
                D    I    AQ + YLH +    ++HRD+K +NI L   L  K+GDFGLA +  
Sbjct: 103 MIKLID----IARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKS 155
Query: 486 EHGANPQTTHIVGTLGYLAPELTRTGKA---TTSTDVYSYGILMLEVACGR 533
               + Q   + G++ ++APE+ R       +  +DVY++GI++ E+  G+
Sbjct: 156 RWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 206

>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 92/192 (47%), Gaps = 9/192 (4%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +GSG FG V+ G   +   +VAIK I   +    ++F+ E   M +L H  LVQL+G C 
Sbjct: 15  IGSGQFGLVHLGYWLNKD-KVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLYGVCL 72
Query: 398 KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQRVV 457
           +Q  + LV++++ +G                   +    + + + + + YL E     V+
Sbjct: 73  EQAPICLVFEFMEHGCLSDYLRTQRGLFAA----ETLLGMCLDVCEGMAYLEE---ASVI 125
Query: 458 HRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTST 517
           HRD+   N L+      K+ DFG+ +         +T     + + +PE+    + ++ +
Sbjct: 126 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 185
Query: 518 DVYSYGILMLEV 529
           DV+S+G+LM EV
Sbjct: 186 DVWSFGVLMWEV 197

>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 64/231 (27%), Positives = 106/231 (45%), Gaps = 31/231 (13%)
Query: 309 EDWEIQCGARRFKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIK--RIGHN 366
           +DWEI  G           +T G      +GSG FG VY+G       +VA+K   +   
Sbjct: 21  DDWEIPDG----------QITVG----QRIGSGSFGTVYKGKWHG---DVAVKMLNVTAP 63
Query: 367 SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXX 426
           + Q ++ F  E+  + + RH N++   G+  K  +L +V  +    S             
Sbjct: 64  TPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFE 122
Query: 427 XXXTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLA-KIY 485
                D    I    AQ + YLH +    ++HRD+K +NI L   L  K+GDFGLA +  
Sbjct: 123 MIKLID----IARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKS 175
Query: 486 EHGANPQTTHIVGTLGYLAPELTRTGKA---TTSTDVYSYGILMLEVACGR 533
               + Q   + G++ ++APE+ R       +  +DVY++GI++ E+  G+
Sbjct: 176 RWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 226

>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 61/202 (30%), Positives = 94/202 (46%), Gaps = 19/202 (9%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIG-HNSQQGMK-EFVAEIMSMGRLR---HRNLVQL 392
           +G G +G VY+   P  G  VA+K +   N ++G+    V E+  + RL    H N+V+L
Sbjct: 12  IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 393 HGWCR-----KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
              C      ++ ++ LV+++V                      D   + L G    L +
Sbjct: 72  MDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRG----LDF 127
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
           LH  C   +VHRD+KP NIL+ +    KL DFGLA+IY +        +V TL Y APE+
Sbjct: 128 LHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQM--ALAPVVVTLWYRAPEV 182
Query: 508 TRTGKATTSTDVYSYGILMLEV 529
                  T  D++S G +  E+
Sbjct: 183 LLQSTYATPVDMWSVGCIFAEM 204

>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 63/231 (27%), Positives = 105/231 (45%), Gaps = 31/231 (13%)
Query: 309 EDWEIQCGARRFKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIK--RIGHN 366
           +DWEI  G           +T G      +GSG FG VY+G       +VA+K   +   
Sbjct: 1   DDWEIPDG----------QITVG----QRIGSGSFGTVYKGKWHG---DVAVKMLNVTAP 43
Query: 367 SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXX 426
           + Q ++ F  E+  + + RH N++   G+     +L +V  +    S             
Sbjct: 44  TPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQWCEGSSLYHHLHIIETKFE 102
Query: 427 XXXTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE 486
                D    I    AQ + YLH +    ++HRD+K +NI L   L  K+GDFGLA +  
Sbjct: 103 MIKLID----IARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKS 155
Query: 487 H-GANPQTTHIVGTLGYLAPELTRTGKA---TTSTDVYSYGILMLEVACGR 533
               + Q   + G++ ++APE+ R       +  +DVY++GI++ E+  G+
Sbjct: 156 RWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 206

>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 49/198 (24%), Positives = 94/198 (47%), Gaps = 11/198 (5%)
Query: 335 QNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHG 394
           ++ +G G FG VY G+     L VA+K +  ++ + ++EF+ E   M  ++H NLVQL G
Sbjct: 16  KHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLG 74
Query: 395 WCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQ 454
            C ++    ++ +++  G+                       +   I+ ++ YL     +
Sbjct: 75  VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVV---LLYMATQISSAMEYLE---KK 128
Query: 455 RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGT--LGYLAPELTRTGK 512
             +HRD+   N L+      K+ DFGL+++     +  T H      + + APE     K
Sbjct: 129 NFIHRDLAARNCLVGENHLVKVADFGLSRLM--TGDTXTAHAGAKFPIKWTAPESLAYNK 186
Query: 513 ATTSTDVYSYGILMLEVA 530
            +  +DV+++G+L+ E+A
Sbjct: 187 FSIKSDVWAFGVLLWEIA 204

>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 73.6 bits (179), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 61/202 (30%), Positives = 94/202 (46%), Gaps = 19/202 (9%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIG-HNSQQGMK-EFVAEIMSMGRLR---HRNLVQL 392
           +G G +G VY+   P  G  VA+K +   N ++G+    V E+  + RL    H N+V+L
Sbjct: 12  IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 393 HGWCR-----KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
              C      ++ ++ LV+++V                      D   + L G    L +
Sbjct: 72  MDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRG----LDF 127
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
           LH  C   +VHRD+KP NIL+ +    KL DFGLA+IY +        +V TL Y APE+
Sbjct: 128 LHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQM--ALDPVVVTLWYRAPEV 182
Query: 508 TRTGKATTSTDVYSYGILMLEV 529
                  T  D++S G +  E+
Sbjct: 183 LLQSTYATPVDMWSVGCIFAEM 204

>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307

Iteration: 1
 Score = 73.6 bits (179), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 64/231 (27%), Positives = 106/231 (45%), Gaps = 31/231 (13%)
Query: 309 EDWEIQCGARRFKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIK--RIGHN 366
           +DWEI  G           +T G      +GSG FG VY+G       +VA+K   +   
Sbjct: 29  DDWEIPDG----------QITVG----QRIGSGSFGTVYKGKWHG---DVAVKMLNVTAP 71
Query: 367 SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXX 426
           + Q ++ F  E+  + + RH N++   G+  K  +L +V  +    S             
Sbjct: 72  TPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFE 130
Query: 427 XXXTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLA-KIY 485
                D    I    AQ + YLH +    ++HRD+K +NI L   L  K+GDFGLA +  
Sbjct: 131 MIKLID----IARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKS 183
Query: 486 EHGANPQTTHIVGTLGYLAPELTRTGKA---TTSTDVYSYGILMLEVACGR 533
               + Q   + G++ ++APE+ R       +  +DVY++GI++ E+  G+
Sbjct: 184 RWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 234

>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 73.6 bits (179), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 68/302 (22%), Positives = 127/302 (42%), Gaps = 38/302 (12%)
Query: 316 GARRFKYAELASVTKGFGE-QNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQG---- 370
           G   F  + L ++     E +  +G GGFG V++G +      VAIK +     +G    
Sbjct: 4   GGSEFPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEM 63
Query: 371 ---MKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXX 427
               +EF  E+  M  L H N+V+L+G         +V ++VP G               
Sbjct: 64  IEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGD----LYHRLLDKAH 117
Query: 428 XXTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTY-----LNAKLGDFGLA 482
              W  + ++++ IA  + Y+  + N  +VHRD++  NI L +      + AK+ DFGL+
Sbjct: 118 PIKWSVKLRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLS 176
Query: 483 KIYEHGANPQTTHIVGTLGYLAPEL--TRTGKATTSTDVYSYGILMLEVACGRRSIEPQK 540
           +   H      + ++G   ++APE         T   D YS+ +++  +  G    + + 
Sbjct: 177 QQSVHS----VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD-EY 231
Query: 541 AAAELLLVDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRV 600
           +  ++  ++ ++E  L   I +     L            N+   C + +P  RP    +
Sbjct: 232 SYGKIKFINMIREEGLRPTIPEDCPPRLR-----------NVIELCWSGDPKKRPHFSYI 280
Query: 601 VE 602
           V+
Sbjct: 281 VK 282

>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272

Iteration: 1
 Score = 73.6 bits (179), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 55/199 (27%), Positives = 91/199 (45%), Gaps = 16/199 (8%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMK-EFVAEIMSMGRLRHRNLVQLHG 394
           +G G FG VY          +A+K +      + G++ +   E+     LRH N+++L+G
Sbjct: 20  LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 395 WCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIG-IAQSLLYLHEECN 453
           +      + L+ +Y P G+                  +QR    I  +A +L Y H   +
Sbjct: 80  YFHDATRVYLILEYAPLGTVYRELQKLSRFD------EQRTATYITELANALSYCH---S 130
Query: 454 QRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKA 513
           +RV+HRD+KP N+LL +    K+ DFG +    H  + +   + GTL YL PE+      
Sbjct: 131 KRVIHRDIKPENLLLGSNGELKIADFGWSV---HAPSSRRDTLCGTLDYLPPEMIEGRMH 187
Query: 514 TTSTDVYSYGILMLEVACG 532
               D++S G+L  E   G
Sbjct: 188 DEKVDLWSLGVLCYEFLVG 206

>pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286

Iteration: 1
 Score = 73.2 bits (178), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 53/217 (24%), Positives = 103/217 (47%), Gaps = 24/217 (11%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +G+G FG V+ G   +   +VA+K +   +   ++ F+ E   M  L+H  LV+L+    
Sbjct: 21  LGAGQFGEVWMGYYNN-STKVAVKTLKPGTM-SVQAFLEEANLMKTLQHDKLVRLYAVVT 78
Query: 398 KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILI--------GIAQSLLYLH 449
           +++ + ++ +Y+  GS                  D+  K+L+         IA+ + Y+ 
Sbjct: 79  REEPIYIITEYMAKGSLLDFLKS-----------DEGGKVLLPKLIDFSAQIAEGMAYIE 127
Query: 450 EECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTR 509
               +  +HRD++ +N+L+   L  K+ DFGLA++ E             + + APE   
Sbjct: 128 ---RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAIN 184
Query: 510 TGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELL 546
            G  T  +DV+S+GIL+ E+    +   P +  A+++
Sbjct: 185 FGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVM 221

>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 73.2 bits (178), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 61/202 (30%), Positives = 94/202 (46%), Gaps = 19/202 (9%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIG-HNSQQGMK-EFVAEIMSMGRLR---HRNLVQL 392
           +G G +G VY+   P  G  VA+K +   N ++G+    V E+  + RL    H N+V+L
Sbjct: 12  IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 393 HGWCR-----KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
              C      ++ ++ LV+++V                      D   + L G    L +
Sbjct: 72  MDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRG----LDF 127
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
           LH  C   +VHRD+KP NIL+ +    KL DFGLA+IY +        +V TL Y APE+
Sbjct: 128 LHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQM--ALFPVVVTLWYRAPEV 182
Query: 508 TRTGKATTSTDVYSYGILMLEV 529
                  T  D++S G +  E+
Sbjct: 183 LLQSTYATPVDMWSVGCIFAEM 204

>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant (T172d) Length = 276

Iteration: 1
 Score = 72.8 bits (177), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 53/202 (26%), Positives = 96/202 (47%), Gaps = 16/202 (7%)
Query: 336 NLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMK---EFVAEIMSMGRLRHRNLVQL 392
           + +G G FG+V  G     G +VA+K +     + +    +   EI ++   RH ++++L
Sbjct: 17  DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKL 76
Query: 393 HGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEEC 452
           +       +  +V +YV  G                    +  ++   I  ++ Y H   
Sbjct: 77  YQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEM-----EARRLFQQILSAVDYCH--- 128
Query: 453 NQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGK 512
              VVHRD+KP N+LLD ++NAK+ DFGL+ +   G   + +   G+  Y APE+  +G+
Sbjct: 129 RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDS--CGSPNYAAPEVI-SGR 185
Query: 513 --ATTSTDVYSYGILMLEVACG 532
             A    D++S G+++  + CG
Sbjct: 186 LYAGPEVDIWSCGVILYALLCG 207

>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263

Iteration: 1
 Score = 72.8 bits (177), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 62/195 (31%), Positives = 93/195 (47%), Gaps = 19/195 (9%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHG-WC 396
           +G G FG V  G     G +VA+K I +++    + F+AE   M +LRH NLVQL G   
Sbjct: 14  IGKGEFGDVMLG--DYRGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIV 69
Query: 397 RKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQRV 456
            ++  L +V +Y+  GS                  D   K  + + +++ YL        
Sbjct: 70  EEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGG---DCLLKFSLDVCEAMEYLE---GNNF 123
Query: 457 VHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTL--GYLAPELTRTGKAT 514
           VHRD+   N+L+     AK+ DFGL K         +T   G L   + APE  R  K +
Sbjct: 124 VHRDLAARNVLVSEDNVAKVSDFGLTK------EASSTQDTGKLPVKWTAPEALREKKFS 177
Query: 515 TSTDVYSYGILMLEV 529
           T +DV+S+GIL+ E+
Sbjct: 178 TKSDVWSFGILLWEI 192

>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278

Iteration: 1
 Score = 72.8 bits (177), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 62/195 (31%), Positives = 93/195 (47%), Gaps = 19/195 (9%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHG-WC 396
           +G G FG V  G     G +VA+K I +++    + F+AE   M +LRH NLVQL G   
Sbjct: 29  IGKGEFGDVMLG--DYRGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIV 84
Query: 397 RKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQRV 456
            ++  L +V +Y+  GS                  D   K  + + +++ YL        
Sbjct: 85  EEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGG---DCLLKFSLDVCEAMEYLE---GNNF 138
Query: 457 VHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTL--GYLAPELTRTGKAT 514
           VHRD+   N+L+     AK+ DFGL K         +T   G L   + APE  R  K +
Sbjct: 139 VHRDLAARNVLVSEDNVAKVSDFGLTK------EASSTQDTGKLPVKWTAPEALREKKFS 192
Query: 515 TSTDVYSYGILMLEV 529
           T +DV+S+GIL+ E+
Sbjct: 193 TKSDVWSFGILLWEI 207

>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Length = 284

Iteration: 1
 Score = 72.8 bits (177), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 54/219 (24%), Positives = 98/219 (44%), Gaps = 38/219 (17%)
Query: 332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQ 391
           F E  L+GSGGFG+V++      G    IKR+ +N+++  +E    + ++ +L H N+V 
Sbjct: 13  FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAERE----VKALAKLDHVNIVH 68
Query: 392 LHG-WCRKQDELLLVYDYVPNGSXXXXXXXXXX---------XXXXXXTWDQRYK----- 436
            +G W          +DY P  S                          W ++ +     
Sbjct: 69  YNGCWD--------GFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLD 120
Query: 437 ------ILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGAN 490
                 +   I + + Y+H   ++++++RD+KPSNI L      K+GDFGL    ++   
Sbjct: 121 KVLALELFEQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGK 177
Query: 491 PQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEV 529
              +   GTL Y++PE   +       D+Y+ G+++ E+
Sbjct: 178 RXRSK--GTLRYMSPEQISSQDYGKEVDLYALGLILAEL 214

>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain Length = 308

Iteration: 1
 Score = 72.8 bits (177), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 62/230 (26%), Positives = 107/230 (46%), Gaps = 23/230 (10%)
Query: 318 RRFKYAELASVTKGFGEQNLVGSGGFGRVYRGLM--PSLGLE---VAIKRIGHNSQQGMK 372
           ++ K  E++     F E+  +G   FG+VY+G +  P+ G +   VAIK +   ++  ++
Sbjct: 16  KQAKLKEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLR 73
Query: 373 E-FVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTW 431
           E F  E M   RL+H N+V L G   K   L +++ Y  +G                 T 
Sbjct: 74  EEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTD 133
Query: 432 DQR-----------YKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFG 480
           D R             ++  IA  + YL    +  VVH+D+   N+L+   LN K+ D G
Sbjct: 134 DDRTVKSALEPPDFVHLVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLG 190
Query: 481 LAK-IYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEV 529
           L + +Y         + +  + ++APE    GK +  +D++SYG+++ EV
Sbjct: 191 LFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEV 240

>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267

Iteration: 1
 Score = 72.8 bits (177), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 95/195 (48%), Gaps = 15/195 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +G+G FG V  G       +VAIK I   S     EF+ E   M  L H  LVQL+G C 
Sbjct: 16  LGTGQFGVVKYGKWRG-QYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCT 73
Query: 398 KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQRVV 457
           KQ  + ++ +Y+ NG                    Q  ++   + +++ YL    +++ +
Sbjct: 74  KQRPIFIITEYMANGCLLNYLREMRHRFQT----QQLLEMCKDVCEAMEYLE---SKQFL 126
Query: 458 HRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGT---LGYLAPELTRTGKAT 514
           HRD+   N L++     K+ DFGL++   +  + + T  VG+   + +  PE+    K +
Sbjct: 127 HRDLAARNCLVNDQGVVKVSDFGLSR---YVLDDEYTSSVGSKFPVRWSPPEVLMYSKFS 183
Query: 515 TSTDVYSYGILMLEV 529
           + +D++++G+LM E+
Sbjct: 184 SKSDIWAFGVLMWEI 198

>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain Length = 263

Iteration: 1
 Score = 72.4 bits (176), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 95/195 (48%), Gaps = 15/195 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +G+G FG V  G       +VAIK I   S     EF+ E   M  L H  LVQL+G C 
Sbjct: 12  LGTGQFGVVKYGKWRG-QYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCT 69
Query: 398 KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQRVV 457
           KQ  + ++ +Y+ NG                    Q  ++   + +++ YL    +++ +
Sbjct: 70  KQRPIFIITEYMANGCLLNYLREMRHRFQT----QQLLEMCKDVCEAMEYLE---SKQFL 122
Query: 458 HRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGT---LGYLAPELTRTGKAT 514
           HRD+   N L++     K+ DFGL++   +  + + T  VG+   + +  PE+    K +
Sbjct: 123 HRDLAARNCLVNDQGVVKVSDFGLSR---YVLDDEYTSSVGSKFPVRWSPPEVLMYSKFS 179
Query: 515 TSTDVYSYGILMLEV 529
           + +D++++G+LM E+
Sbjct: 180 SKSDIWAFGVLMWEI 194

>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor That Attenuates Hyperactivity In Clock Mutant Mice Length = 350

Iteration: 1
 Score = 72.4 bits (176), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 65/211 (30%), Positives = 101/211 (47%), Gaps = 19/211 (9%)
Query: 331 GFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLV 390
            + +  ++G+G FG VY+  +   G  VAIK++  + +   +E    +  M +L H N+V
Sbjct: 21  SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIV 76
Query: 391 QLHGWC----RKQDE--LLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQS 444
           +L  +      K+DE  L LV DYVP                    + + Y  +  + +S
Sbjct: 77  RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFRS 134
Query: 445 LLYLHEECNQRVVHRDVKPSNILLDTYLNA-KLGDFGLAKIYEHGANPQTTHIVGTLGYL 503
           L Y+H   +  + HRD+KP N+LLD      KL DFG AK    G  P  ++I     Y 
Sbjct: 135 LAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSYICSRY-YR 189
Query: 504 APELTR-TGKATTSTDVYSYGILMLEVACGR 533
           APEL       T+S DV+S G ++ E+  G+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 220

>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283

Iteration: 1
 Score = 72.4 bits (176), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 95/195 (48%), Gaps = 15/195 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +G+G FG V  G       +VAIK I   S     EF+ E   M  L H  LVQL+G C 
Sbjct: 32  LGTGQFGVVKYGKWRG-QYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCT 89
Query: 398 KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQRVV 457
           KQ  + ++ +Y+ NG                    Q  ++   + +++ YL    +++ +
Sbjct: 90  KQRPIFIITEYMANGCLLNYLREMRHRFQT----QQLLEMCKDVCEAMEYLE---SKQFL 142
Query: 458 HRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGT---LGYLAPELTRTGKAT 514
           HRD+   N L++     K+ DFGL++   +  + + T  VG+   + +  PE+    K +
Sbjct: 143 HRDLAARNCLVNDQGVVKVSDFGLSR---YVLDDEETSSVGSKFPVRWSPPEVLMYSKFS 199
Query: 515 TSTDVYSYGILMLEV 529
           + +D++++G+LM E+
Sbjct: 200 SKSDIWAFGVLMWEI 214

>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450

Iteration: 1
 Score = 72.4 bits (176), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 62/195 (31%), Positives = 93/195 (47%), Gaps = 19/195 (9%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHG-WC 396
           +G G FG V  G     G +VA+K I +++    + F+AE   M +LRH NLVQL G   
Sbjct: 201 IGKGEFGDVMLG--DYRGNKVAVKCIKNDAT--AQAFLAEASVMTQLRHSNLVQLLGVIV 256
Query: 397 RKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQRV 456
            ++  L +V +Y+  GS                  D   K  + + +++ YL        
Sbjct: 257 EEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGG---DCLLKFSLDVCEAMEYLE---GNNF 310
Query: 457 VHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTL--GYLAPELTRTGKAT 514
           VHRD+   N+L+     AK+ DFGL K         +T   G L   + APE  R  K +
Sbjct: 311 VHRDLAARNVLVSEDNVAKVSDFGLTK------EASSTQDTGKLPVKWTAPEALREKKFS 364
Query: 515 TSTDVYSYGILMLEV 529
           T +DV+S+GIL+ E+
Sbjct: 365 TKSDVWSFGILLWEI 379

>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277

Iteration: 1
 Score = 72.4 bits (176), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 48/198 (24%), Positives = 94/198 (47%), Gaps = 11/198 (5%)
Query: 335 QNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHG 394
           ++ +G G +G VY G+     L VA+K +  ++ + ++EF+ E   M  ++H NLVQL G
Sbjct: 16  KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLG 74
Query: 395 WCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQ 454
            C ++    ++ +++  G+                       +   I+ ++ YL     +
Sbjct: 75  VCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVV---LLYMATQISSAMEYLE---KK 128
Query: 455 RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGT--LGYLAPELTRTGK 512
             +HRD+   N L+      K+ DFGL+++     +  T H      + + APE     K
Sbjct: 129 NFIHRDLAARNCLVGENHLVKVADFGLSRLM--TGDTXTAHAGAKFPIKWTAPESLAYNK 186
Query: 513 ATTSTDVYSYGILMLEVA 530
            +  +DV+++G+L+ E+A
Sbjct: 187 FSIKSDVWAFGVLLWEIA 204

>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With 6-Bromoindirubin-3'-Oxime Length = 350

Iteration: 1
 Score = 72.4 bits (176), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 67/211 (31%), Positives = 100/211 (47%), Gaps = 19/211 (9%)
Query: 331 GFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLV 390
            + +  ++G+G FG VY+  +   G  VAIK++     QG      E+  M +L H N+V
Sbjct: 21  SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQGKAFKNRELQIMRKLDHCNIV 76
Query: 391 QLHGWC----RKQDE--LLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQS 444
           +L  +      K+DE  L LV DYVP                    + + Y  +  + +S
Sbjct: 77  RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFRS 134
Query: 445 LLYLHEECNQRVVHRDVKPSNILLDTYLNA-KLGDFGLAKIYEHGANPQTTHIVGTLGYL 503
           L Y+H   +  + HRD+KP N+LLD      KL DFG AK    G  P  ++I     Y 
Sbjct: 135 LAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSYICSRY-YR 189
Query: 504 APELTR-TGKATTSTDVYSYGILMLEVACGR 533
           APEL       T+S DV+S G ++ E+  G+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 220

>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta. Length = 352

Iteration: 1
 Score = 72.4 bits (176), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 67/211 (31%), Positives = 100/211 (47%), Gaps = 19/211 (9%)
Query: 331 GFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLV 390
            + +  ++G+G FG VY+  +   G  VAIK++     QG      E+  M +L H N+V
Sbjct: 21  SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQGKAFKNRELQIMRKLDHCNIV 76
Query: 391 QLHGWC----RKQDE--LLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQS 444
           +L  +      K+DE  L LV DYVP                    + + Y  +  + +S
Sbjct: 77  RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFRS 134
Query: 445 LLYLHEECNQRVVHRDVKPSNILLDTYLNA-KLGDFGLAKIYEHGANPQTTHIVGTLGYL 503
           L Y+H   +  + HRD+KP N+LLD      KL DFG AK    G  P  ++I     Y 
Sbjct: 135 LAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSYICSRY-YR 189
Query: 504 APELTR-TGKATTSTDVYSYGILMLEVACGR 533
           APEL       T+S DV+S G ++ E+  G+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 220

>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex With Ch4987655 And Mgamp-Pnp Length = 307

Iteration: 1
 Score = 72.4 bits (176), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 55/177 (31%), Positives = 90/177 (50%), Gaps = 31/177 (17%)
Query: 436 KILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLA-KIYEHGANPQTT 494
           K+ I + + L YL E+   +++HRDVKPSNIL+++    KL DFG++ ++ +  AN    
Sbjct: 108 KVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN---- 161
Query: 495 HIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKEL 554
             VGT  Y++PE  +    +  +D++S G+ ++E+A GR  I P  A          KE 
Sbjct: 162 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDA----------KE- 210
Query: 555 HLEGEITQAIDQTLDYYDLAEAELVLNLGLF----------CSAPNPVYRPDMRRVV 601
             +     AI + LDY  + E    L  G+F          C   NP  R D+++++
Sbjct: 211 --DSRPPMAIFELLDYI-VNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLM 264

>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Benzoimidazol Inhibitor Length = 372

Iteration: 1
 Score = 72.4 bits (176), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 65/211 (30%), Positives = 101/211 (47%), Gaps = 19/211 (9%)
Query: 331 GFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLV 390
            + +  ++G+G FG VY+  +   G  VAIK++  + +   +E    +  M +L H N+V
Sbjct: 34  SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIV 89
Query: 391 QLHGWC----RKQDE--LLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQS 444
           +L  +      K+DE  L LV DYVP                    + + Y  +  + +S
Sbjct: 90  RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFRS 147
Query: 445 LLYLHEECNQRVVHRDVKPSNILLDTYLNA-KLGDFGLAKIYEHGANPQTTHIVGTLGYL 503
           L Y+H   +  + HRD+KP N+LLD      KL DFG AK    G  P  ++I     Y 
Sbjct: 148 LAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSYICSRY-YR 202
Query: 504 APELTR-TGKATTSTDVYSYGILMLEVACGR 533
           APEL       T+S DV+S G ++ E+  G+
Sbjct: 203 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 233

>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure Length = 309

Iteration: 1
 Score = 72.4 bits (176), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 88/207 (42%), Gaps = 19/207 (9%)
Query: 330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRI---GHNSQQGMKEFVAEIMSMGRLRH 386
           K F +   +G G FG VY          VAIK++   G  S +  ++ + E+  + +LRH
Sbjct: 15  KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRH 74
Query: 387 RNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLL 446
            N +Q  G   ++    LV +Y    +                       +  G  Q L 
Sbjct: 75  PNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIA-----AVTHGALQGLA 129
Query: 447 YLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPE 506
           YLH   +  ++HRDVK  NILL      KLGDFG A I            VGT  ++APE
Sbjct: 130 YLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIM-----APANXFVGTPYWMAPE 181
Query: 507 L---TRTGKATTSTDVYSYGILMLEVA 530
           +      G+     DV+S GI  +E+A
Sbjct: 182 VILAMDEGQYDGKVDVWSLGITCIELA 208

>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex With Inhibitor Cgi1746 Length = 271

Iteration: 1
 Score = 72.4 bits (176), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 95/195 (48%), Gaps = 15/195 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +G+G FG V  G       +VAIK I   S     EF+ E   M  L H  LVQL+G C 
Sbjct: 17  LGTGQFGVVKYGKWRG-QYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCT 74
Query: 398 KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQRVV 457
           KQ  + ++ +Y+ NG                    Q  ++   + +++ YL    +++ +
Sbjct: 75  KQRPIFIITEYMANGCLLNYLREMRHRFQT----QQLLEMCKDVCEAMEYLE---SKQFL 127
Query: 458 HRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGT---LGYLAPELTRTGKAT 514
           HRD+   N L++     K+ DFGL++   +  + + T  VG+   + +  PE+    K +
Sbjct: 128 HRDLAARNCLVNDQGVVKVSDFGLSR---YVLDDEYTSSVGSKFPVRWSPPEVLMYSKFS 184
Query: 515 TSTDVYSYGILMLEV 529
           + +D++++G+LM E+
Sbjct: 185 SKSDIWAFGVLMWEI 199

>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276

Iteration: 1
 Score = 72.4 bits (176), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 93/209 (44%), Gaps = 9/209 (4%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +G G FG V+ G   +    VAIK +   +    + F+ E   M +LRH  LVQL+    
Sbjct: 16  LGQGCFGEVWMGTW-NGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYA-VV 72
Query: 398 KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQRVV 457
            ++ + +V +Y+  GS                   Q   +   IA  + Y+        V
Sbjct: 73  SEEPIXIVTEYMSKGSLLDFLKGETGKYLRL---PQLVDMAAQIASGMAYVE---RMNYV 126
Query: 458 HRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTST 517
           HRD++ +NIL+   L  K+ DFGLA++ E             + + APE    G+ T  +
Sbjct: 127 HRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKS 186
Query: 518 DVYSYGILMLEVACGRRSIEPQKAAAELL 546
           DV+S+GIL+ E+    R   P     E+L
Sbjct: 187 DVWSFGILLTELTTKGRVPYPGMVNREVL 215

>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2 Length = 289

Iteration: 1
 Score = 72.0 bits (175), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 62/227 (27%), Positives = 105/227 (46%), Gaps = 23/227 (10%)
Query: 321 KYAELASVTKGFGEQNLVGSGGFGRVYRGLM--PSLGLE---VAIKRIGHNSQQGMKE-F 374
           K  E++     F E+  +G   FG+VY+G +  P+ G +   VAIK +   ++  ++E F
Sbjct: 2   KLKEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEF 59
Query: 375 VAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQR 434
             E M   RL+H N+V L G   K   L +++ Y  +G                 T D R
Sbjct: 60  RHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDR 119
Query: 435 -----------YKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK 483
                        ++  IA  + YL    +  VVH+D+   N+L+   LN K+ D GL +
Sbjct: 120 TVKSALEPPDFVHLVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFR 176
Query: 484 -IYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEV 529
            +Y         + +  + ++APE    GK +  +D++SYG+++ EV
Sbjct: 177 EVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEV 223

>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286

Iteration: 1
 Score = 72.0 bits (175), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 93/195 (47%), Gaps = 11/195 (5%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +G G +G VY G+     L VA+K +  ++ + ++EF+ E   M  ++H NLVQL G C 
Sbjct: 22  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 398 KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQRVV 457
           ++    ++ +++  G+                       +   I+ ++ YL +   +  +
Sbjct: 81  REPPFYIIIEFMTYGNLLDYLRECNRQEVNAVV---LLYMATQISSAMEYLEK---KNFI 134
Query: 458 HRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGT--LGYLAPELTRTGKATT 515
           HRD+   N L+      K+ DFGL+++     +  T H      + + APE     K + 
Sbjct: 135 HRDLAARNCLVGENHLVKVADFGLSRL--MTGDTXTAHAGAKFPIKWTAPESLAYNKFSI 192
Query: 516 STDVYSYGILMLEVA 530
            +DV+++G+L+ E+A
Sbjct: 193 KSDVWAFGVLLWEIA 207

>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278

Iteration: 1
 Score = 72.0 bits (175), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 93/195 (47%), Gaps = 11/195 (5%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +G G +G VY G+     L VA+K +  ++ + ++EF+ E   M  ++H NLVQL G C 
Sbjct: 26  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 398 KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQRVV 457
           ++    ++ +++  G+                       +   I+ ++ YL +   +  +
Sbjct: 85  REPPFYIITEFMTYGNLLDYLRECNRQEVNAVV---LLYMATQISSAMEYLEK---KNFI 138
Query: 458 HRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGT--LGYLAPELTRTGKATT 515
           HRD+   N L+      K+ DFGL+++     +  T H      + + APE     K + 
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRL--MTGDTXTAHAGAKFPIKWTAPESLAYNKFSI 196
Query: 516 STDVYSYGILMLEVA 530
            +DV+++G+L+ E+A
Sbjct: 197 KSDVWAFGVLLWEIA 211

>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290

Iteration: 1
 Score = 72.0 bits (175), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 90/207 (43%), Gaps = 12/207 (5%)
Query: 335 QNLVGSGGFGRVYRGLMPSLGLEVAIKRIG-HNSQQGMKEFVAEIMSMGRLRHRNLVQLH 393
           Q ++GSG    V          +VAIKRI     Q  M E + EI +M +  H N+V  +
Sbjct: 15  QEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYY 74
Query: 394 GWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXX-TWDQRY--KILIGIAQSLLYLHE 450
                +DEL LV   +  GS                   D+     IL  + + L YLH+
Sbjct: 75  TSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHK 134
Query: 451 ECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGA----NPQTTHIVGTLGYLAPE 506
                 +HRDVK  NILL    + ++ DFG++     G     N      VGT  ++APE
Sbjct: 135 NGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPE 191
Query: 507 LTRTGKATT-STDVYSYGILMLEVACG 532
           +    +      D++S+GI  +E+A G
Sbjct: 192 VMEQVRGYDFKADIWSFGITAIELATG 218

>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280

Iteration: 1
 Score = 72.0 bits (175), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 62/231 (26%), Positives = 106/231 (45%), Gaps = 31/231 (13%)
Query: 309 EDWEIQCGARRFKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIK--RIGHN 366
           +DWEI  G           +T G      +GSG FG VY+G       +VA+K   +   
Sbjct: 5   DDWEIPDG----------QITVG----QRIGSGSFGTVYKGKWHG---DVAVKMLNVTAP 47
Query: 367 SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXX 426
           + Q ++ F  E+  + + RH N++   G+  K  +L +V  +    S             
Sbjct: 48  TPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHASETKFE 106
Query: 427 XXXTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE 486
                D    I    A+ + YLH +    ++HRD+K +NI L      K+GDFGLA +  
Sbjct: 107 MKKLID----IARQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATVKS 159
Query: 487 H-GANPQTTHIVGTLGYLAPELTRTGKA---TTSTDVYSYGILMLEVACGR 533
               + Q   + G++ ++APE+ R   +   +  +DVY++GI++ E+  G+
Sbjct: 160 RWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 210

>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of Triazine Derivatives As Potent, Selective Tie-2 Inhibitors Length = 317

Iteration: 1
 Score = 72.0 bits (175), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 56/215 (26%), Positives = 101/215 (46%), Gaps = 30/215 (13%)
Query: 335 QNLVGSGGFGRVYRGLMPSLGL--EVAIKRIG-HNSQQGMKEFVAEIMSMGRL-RHRNLV 390
           Q+++G G FG+V +  +   GL  + AIKR+  + S+   ++F  E+  + +L  H N++
Sbjct: 20  QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 79
Query: 391 QLHGWCRKQDELLLVYDYVPNGS-----------XXXXXXXXXXXXXXXXTWDQRYKILI 439
            L G C  +  L L  +Y P+G+                           +  Q      
Sbjct: 80  NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 139
Query: 440 GIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGT 499
            +A+ + YL +   ++ +HRD+   NIL+     AK+ DFGL++        Q  ++  T
Sbjct: 140 DVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSR-------GQEVYVKKT 189
Query: 500 LG-----YLAPELTRTGKATTSTDVYSYGILMLEV 529
           +G     ++A E       TT++DV+SYG+L+ E+
Sbjct: 190 MGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEI 224

>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292

Iteration: 1
 Score = 72.0 bits (175), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 50/198 (25%), Positives = 94/198 (47%), Gaps = 11/198 (5%)
Query: 335 QNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHG 394
           ++ +G G +G VY G+     L VA+K +  ++ + ++EF+ E   M  ++H NLVQL G
Sbjct: 37  KHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLG 95
Query: 395 WCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQ 454
            C  +    +V +Y+P G+                       +   I+ ++ YL +   +
Sbjct: 96  VCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVV---LLYMATQISSAMEYLEK---K 149
Query: 455 RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGT--LGYLAPELTRTGK 512
             +HRD+   N L+      K+ DFGL+++     +  T H      + + APE      
Sbjct: 150 NFIHRDLAARNCLVGENHVVKVADFGLSRL--MTGDTYTAHAGAKFPIKWTAPESLAYNT 207
Query: 513 ATTSTDVYSYGILMLEVA 530
            +  +DV+++G+L+ E+A
Sbjct: 208 FSIKSDVWAFGVLLWEIA 225

>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284

Iteration: 1
 Score = 72.0 bits (175), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 92/195 (47%), Gaps = 11/195 (5%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +G G +G VY G+     L VA+K +  ++ + ++EF+ E   M  ++H NLVQL G C 
Sbjct: 21  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 398 KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQRVV 457
           ++    ++ +++  G+                       +   I+ ++ YL     +  +
Sbjct: 80  REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVV---LLYMATQISSAMEYLE---KKNFI 133
Query: 458 HRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGT--LGYLAPELTRTGKATT 515
           HRD+   N L+      K+ DFGL+++     +  T H      + + APE     K + 
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRL--MTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 191
Query: 516 STDVYSYGILMLEVA 530
            +DV+++G+L+ E+A
Sbjct: 192 KSDVWAFGVLLWEIA 206

>pdb|1FVR|A Chain A, Tie2 Kinase Domain Length = 327

Iteration: 1
 Score = 72.0 bits (175), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 56/215 (26%), Positives = 101/215 (46%), Gaps = 30/215 (13%)
Query: 335 QNLVGSGGFGRVYRGLMPSLGL--EVAIKRIG-HNSQQGMKEFVAEIMSMGRL-RHRNLV 390
           Q+++G G FG+V +  +   GL  + AIKR+  + S+   ++F  E+  + +L  H N++
Sbjct: 30  QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 89
Query: 391 QLHGWCRKQDELLLVYDYVPNGS-----------XXXXXXXXXXXXXXXXTWDQRYKILI 439
            L G C  +  L L  +Y P+G+                           +  Q      
Sbjct: 90  NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 149
Query: 440 GIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGT 499
            +A+ + YL +   ++ +HRD+   NIL+     AK+ DFGL++        Q  ++  T
Sbjct: 150 DVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSR-------GQEVYVKKT 199
Query: 500 LG-----YLAPELTRTGKATTSTDVYSYGILMLEV 529
           +G     ++A E       TT++DV+SYG+L+ E+
Sbjct: 200 MGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEI 234

>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287

Iteration: 1
 Score = 72.0 bits (175), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 46/193 (23%), Positives = 90/193 (46%), Gaps = 7/193 (3%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +G G +G VY G+     L VA+K +  ++ + ++EF+ E   M  ++H NLVQL G C 
Sbjct: 22  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 398 KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQRVV 457
           ++    ++ +++  G+                       +   I+ ++ YL +   +  +
Sbjct: 81  REPPFYIITEFMTYGNLLDYLRECNRQEVNAVV---LLYMATQISSAMEYLEK---KNFI 134
Query: 458 HRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTST 517
           HRD+   N L+      K+ DFGL+++               + + APE     K +  +
Sbjct: 135 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKS 194
Query: 518 DVYSYGILMLEVA 530
           DV+++G+L+ E+A
Sbjct: 195 DVWAFGVLLWEIA 207

>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With 3-Indolyl-4- Arylmaleimide Inhibitor Length = 391

Iteration: 1
 Score = 72.0 bits (175), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 65/211 (30%), Positives = 101/211 (47%), Gaps = 19/211 (9%)
Query: 331 GFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLV 390
            + +  ++G+G FG VY+  +   G  VAIK++  + +   +E    +  M +L H N+V
Sbjct: 26  SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIV 81
Query: 391 QLHGWC----RKQDE--LLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQS 444
           +L  +      K+DE  L LV DYVP                    + + Y  +  + +S
Sbjct: 82  RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFRS 139
Query: 445 LLYLHEECNQRVVHRDVKPSNILLDTYLNA-KLGDFGLAKIYEHGANPQTTHIVGTLGYL 503
           L Y+H   +  + HRD+KP N+LLD      KL DFG AK    G  P  ++I     Y 
Sbjct: 140 LAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSYICSRY-YR 194
Query: 504 APELTRTGKA-TTSTDVYSYGILMLEVACGR 533
           APEL       T+S DV+S G ++ E+  G+
Sbjct: 195 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 225

>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With 2-Isopropyl-7- (4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3- Ylamino)-2h- Phthalazin-1-One Length = 274

Iteration: 1
 Score = 72.0 bits (175), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 95/195 (48%), Gaps = 15/195 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +G+G FG V  G       +VAIK I   S     EF+ E   M  L H  LVQL+G C 
Sbjct: 23  LGTGQFGVVKYGKWRG-QYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCT 80
Query: 398 KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQRVV 457
           KQ  + ++ +Y+ NG                    Q  ++   + +++ YL    +++ +
Sbjct: 81  KQRPIFIITEYMANGCLLNYLREMRHRFQT----QQLLEMCKDVCEAMEYLE---SKQFL 133
Query: 458 HRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGT---LGYLAPELTRTGKAT 514
           HRD+   N L++     K+ DFGL++   +  + + T  VG+   + +  PE+    K +
Sbjct: 134 HRDLAARNCLVNDQGVVKVSDFGLSR---YVLDDEYTSSVGSKFPVRWSPPEVLMYSKFS 190
Query: 515 TSTDVYSYGILMLEV 529
           + +D++++G+LM E+
Sbjct: 191 SKSDIWAFGVLMWEI 205

>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310

Iteration: 1
 Score = 72.0 bits (175), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 67/280 (23%), Positives = 117/280 (41%), Gaps = 30/280 (10%)
Query: 331 GFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRI---GHNSQQGMKEFVAEIMSMGRLRHR 387
            F  +  +G G F  VYR      G+ VA+K++        +   + + EI  + +L H 
Sbjct: 33  NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 388 NLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXX---XXXTWDQRYKILIGIAQS 444
           N+++ +    + +EL +V +    G                     W    K  + +  +
Sbjct: 93  NVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVW----KYFVQLCSA 148
Query: 445 LLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLA 504
           L ++H   ++RV+HRD+KP+N+ +      KLGD GL + +        + +VGT  Y++
Sbjct: 149 LEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHS-LVGTPYYMS 204
Query: 505 PELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAI 564
           PE          +D++S G L+ E+A          A       D +    L  +I Q  
Sbjct: 205 PERIHENGYNFKSDIWSLGCLLYEMA----------ALQSPFYGDKMNLYSLCKKIEQCD 254
Query: 565 DQTL--DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVE 602
              L  D+Y    +E +  L   C  P+P  RPD+  V +
Sbjct: 255 YPPLPSDHY----SEELRQLVNMCINPDPEKRPDVTYVYD 290

>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 90/195 (46%), Gaps = 10/195 (5%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +G G  G V    + S G  VA+K++    QQ  +    E++ M   +H N+V+++    
Sbjct: 28  IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 87
Query: 398 KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQRVV 457
             DEL +V +++  G+                  +Q   + + + Q+L  LH    Q V+
Sbjct: 88  VGDELWVVMEFLEGGALTDIVTHTRMNE------EQIAAVCLAVLQALSVLHA---QGVI 138
Query: 458 HRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTST 517
           HRD+K  +ILL      KL DFG          P+   +VGT  ++APEL          
Sbjct: 139 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV-PRRKXLVGTPYWMAPELISRLPYGPEV 197
Query: 518 DVYSYGILMLEVACG 532
           D++S GI+++E+  G
Sbjct: 198 DIWSLGIMVIEMVDG 212

>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In Complexed With Inhibitor Length = 414

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 65/211 (30%), Positives = 101/211 (47%), Gaps = 19/211 (9%)
Query: 331 GFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLV 390
            + +  ++G+G FG VY+  +   G  VAIK++  + +   +E    +  M +L H N+V
Sbjct: 49  SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIV 104
Query: 391 QL----HGWCRKQDE--LLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQS 444
           +L    +    K+DE  L LV DYVP                    + + Y  +  + +S
Sbjct: 105 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFRS 162
Query: 445 LLYLHEECNQRVVHRDVKPSNILLDTYLNA-KLGDFGLAKIYEHGANPQTTHIVGTLGYL 503
           L Y+H   +  + HRD+KP N+LLD      KL DFG AK    G  P  ++I     Y 
Sbjct: 163 LAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSYICSRY-YR 217
Query: 504 APELT-RTGKATTSTDVYSYGILMLEVACGR 533
           APEL       T+S DV+S G ++ E+  G+
Sbjct: 218 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 248

>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 93/195 (47%), Gaps = 11/195 (5%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +G G +G VY G+     L VA+K +  ++ + ++EF+ E   M  ++H NLVQL G C 
Sbjct: 21  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 398 KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQRVV 457
           ++    ++ +++  G+                       +   I+ ++ YL +   +  +
Sbjct: 80  REPPFYIITEFMTYGNLLDYLRECNRQEVNAVV---LLYMATQISSAMEYLEK---KNFI 133
Query: 458 HRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGT--LGYLAPELTRTGKATT 515
           HRD+   N L+      K+ DFGL+++     +  T H      + + APE     K + 
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRL--MTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 191
Query: 516 STDVYSYGILMLEVA 530
            +DV+++G+L+ E+A
Sbjct: 192 KSDVWAFGVLLWEIA 206

>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/197 (28%), Positives = 92/197 (46%), Gaps = 12/197 (6%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +G G  G VY  +  + G EVAI+++    Q   +  + EI+ M   ++ N+V       
Sbjct: 28  IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 398 KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQRVV 457
             DEL +V +Y+  GS                   Q   +     Q+L +LH   + +V+
Sbjct: 88  VGDELWVVMEYLAGGSLTDVVTETCMDEG------QIAAVCRECLQALEFLH---SNQVI 138
Query: 458 HRDVKPSNILLDTYLNAKLGDFGL-AKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTS 516
           HRD+K  NILL    + KL DFG  A+I    +  + + +VGT  ++APE+         
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS--KRSEMVGTPYWMAPEVVTRKAYGPK 196
Query: 517 TDVYSYGILMLEVACGR 533
            D++S GI+ +E+  G 
Sbjct: 197 VDIWSLGIMAIEMIEGE 213

>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And Specifity Of A Ste20p Map3k Length = 348

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 88/207 (42%), Gaps = 19/207 (9%)
Query: 330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRI---GHNSQQGMKEFVAEIMSMGRLRH 386
           K F +   +G G FG VY          VAIK++   G  S +  ++ + E+  + +LRH
Sbjct: 54  KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRH 113
Query: 387 RNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLL 446
            N +Q  G   ++    LV +Y    +                       +  G  Q L 
Sbjct: 114 PNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIA-----AVTHGALQGLA 168
Query: 447 YLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPE 506
           YLH   +  ++HRDVK  NILL      KLGDFG A I            VGT  ++APE
Sbjct: 169 YLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMA-----PANXFVGTPYWMAPE 220
Query: 507 L---TRTGKATTSTDVYSYGILMLEVA 530
           +      G+     DV+S GI  +E+A
Sbjct: 221 VILAMDEGQYDGKVDVWSLGITCIELA 247

>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 90/207 (43%), Gaps = 12/207 (5%)
Query: 335 QNLVGSGGFGRVYRGLMPSLGLEVAIKRIG-HNSQQGMKEFVAEIMSMGRLRHRNLVQLH 393
           Q ++GSG    V          +VAIKRI     Q  M E + EI +M +  H N+V  +
Sbjct: 20  QEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYY 79
Query: 394 GWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXX-TWDQRY--KILIGIAQSLLYLHE 450
                +DEL LV   +  GS                   D+     IL  + + L YLH+
Sbjct: 80  TSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHK 139
Query: 451 ECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGA----NPQTTHIVGTLGYLAPE 506
                 +HRDVK  NILL    + ++ DFG++     G     N      VGT  ++APE
Sbjct: 140 NGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPE 196
Query: 507 LTRTGKATT-STDVYSYGILMLEVACG 532
           +    +      D++S+GI  +E+A G
Sbjct: 197 VMEQVRGYDFKADIWSFGITAIELATG 223

>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine Kinase Bound To A Pyrrolopyrimidine-Containing Compound Length = 283

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 95/195 (48%), Gaps = 15/195 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +G+G FG V  G       +VAIK I   S     EF+ E   M  L H  LVQL+G C 
Sbjct: 32  LGTGQFGVVKYGKWRG-QYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCT 89
Query: 398 KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQRVV 457
           KQ  + ++ +Y+ NG                    Q  ++   + +++ YL    +++ +
Sbjct: 90  KQRPIFIITEYMANGCLLNYLREMRHRFQT----QQLLEMCKDVCEAMEYLE---SKQFL 142
Query: 458 HRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGT---LGYLAPELTRTGKAT 514
           HRD+   N L++     K+ DFGL++   +  + + T  VG+   + +  PE+    K +
Sbjct: 143 HRDLAARNCLVNDQGVVKVSDFGLSR---YVLDDEYTSSVGSKFPVRWSPPEVLMYSKFS 199
Query: 515 TSTDVYSYGILMLEV 529
           + +D++++G+LM E+
Sbjct: 200 SKSDIWAFGVLMWEI 214

>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 48/198 (24%), Positives = 94/198 (47%), Gaps = 11/198 (5%)
Query: 335 QNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHG 394
           ++ +G G +G VY G+     L VA+K +  ++ + ++EF+ E   M  ++H NLVQL G
Sbjct: 23  KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLG 81
Query: 395 WCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQ 454
            C ++    ++ +++  G+                       +   I+ ++ YL     +
Sbjct: 82  VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVV---LLYMATQISSAMEYLE---KK 135
Query: 455 RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGT--LGYLAPELTRTGK 512
             +HRD+   N L+      K+ DFGL+++     +  T H      + + APE     K
Sbjct: 136 NFIHRDLAARNCLVGENHLVKVADFGLSRL--MTGDTYTAHAGAKFPIKWTAPESLAYNK 193
Query: 513 ATTSTDVYSYGILMLEVA 530
            +  +DV+++G+L+ E+A
Sbjct: 194 FSIKSDVWAFGVLLWEIA 211

>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 93/195 (47%), Gaps = 11/195 (5%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +G G +G VY G+     L VA+K +  ++ + ++EF+ E   M  ++H NLVQL G C 
Sbjct: 26  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 398 KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQRVV 457
           ++    ++ +++  G+                       +   I+ ++ YL +   +  +
Sbjct: 85  REPPFYIIIEFMTYGNLLDYLRECNRQEVNAVV---LLYMATQISSAMEYLEK---KNFI 138
Query: 458 HRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGT--LGYLAPELTRTGKATT 515
           HRD+   N L+      K+ DFGL+++     +  T H      + + APE     K + 
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRL--MTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 196
Query: 516 STDVYSYGILMLEVA 530
            +DV+++G+L+ E+A
Sbjct: 197 KSDVWAFGVLLWEIA 211

>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 48/198 (24%), Positives = 94/198 (47%), Gaps = 11/198 (5%)
Query: 335 QNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHG 394
           ++ +G G +G VY G+     L VA+K +  ++ + ++EF+ E   M  ++H NLVQL G
Sbjct: 18  KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLG 76
Query: 395 WCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQ 454
            C ++    ++ +++  G+                       +   I+ ++ YL     +
Sbjct: 77  VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVV---LLYMATQISSAMEYLE---KK 130
Query: 455 RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGT--LGYLAPELTRTGK 512
             +HRD+   N L+      K+ DFGL+++     +  T H      + + APE     K
Sbjct: 131 NFIHRDLAARNCLVGENHLVKVADFGLSRL--MTGDTYTAHAGAKFPIKWTAPESLAYNK 188
Query: 513 ATTSTDVYSYGILMLEVA 530
            +  +DV+++G+L+ E+A
Sbjct: 189 FSIKSDVWAFGVLLWEIA 206

>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 48/198 (24%), Positives = 94/198 (47%), Gaps = 11/198 (5%)
Query: 335 QNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHG 394
           ++ +G G +G VY G+     L VA+K +  ++ + ++EF+ E   M  ++H NLVQL G
Sbjct: 18  KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLG 76
Query: 395 WCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQ 454
            C ++    ++ +++  G+                       +   I+ ++ YL     +
Sbjct: 77  VCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVV---LLYMATQISSAMEYLE---KK 130
Query: 455 RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGT--LGYLAPELTRTGK 512
             +HRD+   N L+      K+ DFGL+++     +  T H      + + APE     K
Sbjct: 131 NFIHRDLAARNCLVGENHLVKVADFGLSRL--MTGDTYTAHAGAKFPIKWTAPESLAYNK 188
Query: 513 ATTSTDVYSYGILMLEVA 530
            +  +DV+++G+L+ E+A
Sbjct: 189 FSIKSDVWAFGVLLWEIA 206

>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 93/195 (47%), Gaps = 11/195 (5%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +G G +G VY G+     L VA+K +  ++ + ++EF+ E   M  ++H NLVQL G C 
Sbjct: 21  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 398 KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQRVV 457
           ++    ++ +++  G+                       +   I+ ++ YL +   +  +
Sbjct: 80  REPPFYIITEFMTYGNLLDYLRECNRQEVNAVV---LLYMATQISSAMEYLEK---KNFI 133
Query: 458 HRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGT--LGYLAPELTRTGKATT 515
           HRD+   N L+      K+ DFGL+++     +  T H      + + APE     K + 
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRL--MTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 191
Query: 516 STDVYSYGILMLEVA 530
            +DV+++G+L+ E+A
Sbjct: 192 KSDVWAFGVLLWEIA 206

>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 46/193 (23%), Positives = 90/193 (46%), Gaps = 7/193 (3%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +G G +G VY G+     L VA+K +  ++ + ++EF+ E   M  ++H NLVQL G C 
Sbjct: 23  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 398 KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQRVV 457
           ++    ++ +++  G+                       +   I+ ++ YL +   +  +
Sbjct: 82  REPPFYIITEFMTYGNLLDYLRECNRQEVNAVV---LLYMATQISSAMEYLEK---KNFI 135
Query: 458 HRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTST 517
           HRD+   N L+      K+ DFGL+++               + + APE     K +  +
Sbjct: 136 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKS 195
Query: 518 DVYSYGILMLEVA 530
           DV+++G+L+ E+A
Sbjct: 196 DVWAFGVLLWEIA 208

>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 92/209 (44%), Gaps = 9/209 (4%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +G G FG V+ G        VAIK +   +    + F+ E   M +LRH  LVQL+    
Sbjct: 26  LGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYA-VV 82
Query: 398 KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQRVV 457
            ++ + +V +Y+  GS                   Q   +   IA  + Y+        V
Sbjct: 83  SEEPIYIVIEYMSKGSLLDFLKGEMGKYLRL---PQLVDMAAQIASGMAYVE---RMNYV 136
Query: 458 HRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTST 517
           HRD++ +NIL+   L  K+ DFGLA++ E             + + APE    G+ T  +
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 518 DVYSYGILMLEVACGRRSIEPQKAAAELL 546
           DV+S+GIL+ E+    R   P     E+L
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVL 225

>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 93/195 (47%), Gaps = 11/195 (5%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +G G +G VY G+     L VA+K +  ++ + ++EF+ E   M  ++H NLVQL G C 
Sbjct: 26  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 398 KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQRVV 457
           ++    ++ +++  G+                       +   I+ ++ YL +   +  +
Sbjct: 85  REPPFYIITEFMTYGNLLDYLRECNRQEVNAVV---LLYMATQISSAMEYLEK---KNFI 138
Query: 458 HRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGT--LGYLAPELTRTGKATT 515
           HRD+   N L+      K+ DFGL+++     +  T H      + + APE     K + 
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRL--MTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 196
Query: 516 STDVYSYGILMLEVA 530
            +DV+++G+L+ E+A
Sbjct: 197 KSDVWAFGVLLWEIA 211

>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 48/198 (24%), Positives = 94/198 (47%), Gaps = 11/198 (5%)
Query: 335 QNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHG 394
           ++ +G G +G VY G+     L VA+K +  ++ + ++EF+ E   M  ++H NLVQL G
Sbjct: 18  KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLG 76
Query: 395 WCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQ 454
            C ++    ++ +++  G+                       +   I+ ++ YL     +
Sbjct: 77  VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVV---LLYMATQISSAMEYLE---KK 130
Query: 455 RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGT--LGYLAPELTRTGK 512
             +HRD+   N L+      K+ DFGL+++     +  T H      + + APE     K
Sbjct: 131 NFIHRDLAARNCLVGENHLVKVADFGLSRL--MTGDTYTAHAGAKFPIKWTAPESLAYNK 188
Query: 513 ATTSTDVYSYGILMLEVA 530
            +  +DV+++G+L+ E+A
Sbjct: 189 FSIKSDVWAFGVLLWEIA 206

>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 90/195 (46%), Gaps = 10/195 (5%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +G G  G V    + S G  VA+K++    QQ  +    E++ M   +H N+V+++    
Sbjct: 37  IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 96
Query: 398 KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQRVV 457
             DEL +V +++  G+                  +Q   + + + Q+L  LH    Q V+
Sbjct: 97  VGDELWVVMEFLEGGALTDIVTHTRMNE------EQIAAVCLAVLQALSVLHA---QGVI 147
Query: 458 HRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTST 517
           HRD+K  +ILL      KL DFG          P+   +VGT  ++APEL          
Sbjct: 148 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV-PRRKXLVGTPYWMAPELISRLPYGPEV 206
Query: 518 DVYSYGILMLEVACG 532
           D++S GI+++E+  G
Sbjct: 207 DIWSLGIMVIEMVDG 221

>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 90/196 (45%), Gaps = 10/196 (5%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +G G  G VY  +  + G EVAI+++    Q   +  + EI+ M   ++ N+V       
Sbjct: 28  IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 398 KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQRVV 457
             DEL +V +Y+  GS                   Q   +     Q+L +LH   + +V+
Sbjct: 88  VGDELWVVMEYLAGGSLTDVVTETCMDEG------QIAAVCRECLQALEFLH---SNQVI 138
Query: 458 HRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTST 517
           HRD+K  NILL    + KL DFG         + ++T +VGT  ++APE+          
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST-MVGTPYWMAPEVVTRKAYGPKV 197
Query: 518 DVYSYGILMLEVACGR 533
           D++S GI+ +E+  G 
Sbjct: 198 DIWSLGIMAIEMIEGE 213

>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 93/195 (47%), Gaps = 11/195 (5%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +G G +G VY G+     L VA+K +  ++ + ++EF+ E   M  ++H NLVQL G C 
Sbjct: 34  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 92
Query: 398 KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQRVV 457
           ++    ++ +++  G+                       +   I+ ++ YL +   +  +
Sbjct: 93  REPPFYIITEFMTYGNLLDYLRECNRQEVNAVV---LLYMATQISSAMEYLEK---KNFI 146
Query: 458 HRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGT--LGYLAPELTRTGKATT 515
           HRD+   N L+      K+ DFGL+++     +  T H      + + APE     K + 
Sbjct: 147 HRDLAARNCLVGENHLVKVADFGLSRL--MTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 204
Query: 516 STDVYSYGILMLEVA 530
            +DV+++G+L+ E+A
Sbjct: 205 KSDVWAFGVLLWEIA 219

>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 90/195 (46%), Gaps = 10/195 (5%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +G G  G V    + S G  VA+K++    QQ  +    E++ M   +H N+V+++    
Sbjct: 32  IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 91
Query: 398 KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQRVV 457
             DEL +V +++  G+                  +Q   + + + Q+L  LH    Q V+
Sbjct: 92  VGDELWVVMEFLEGGALTDIVTHTRMNE------EQIAAVCLAVLQALSVLHA---QGVI 142
Query: 458 HRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTST 517
           HRD+K  +ILL      KL DFG          P+   +VGT  ++APEL          
Sbjct: 143 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV-PRRKXLVGTPYWMAPELISRLPYGPEV 201
Query: 518 DVYSYGILMLEVACG 532
           D++S GI+++E+  G
Sbjct: 202 DIWSLGIMVIEMVDG 216

>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 93/195 (47%), Gaps = 11/195 (5%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +G G +G VY G+     L VA+K +  ++ + ++EF+ E   M  ++H NLVQL G C 
Sbjct: 25  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 83
Query: 398 KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQRVV 457
           ++    ++ +++  G+                       +   I+ ++ YL +   +  +
Sbjct: 84  REPPFYIITEFMTYGNLLDYLRECNRQEVNAVV---LLYMATQISSAMEYLEK---KNFI 137
Query: 458 HRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGT--LGYLAPELTRTGKATT 515
           HRD+   N L+      K+ DFGL+++     +  T H      + + APE     K + 
Sbjct: 138 HRDLAARNCLVGENHLVKVADFGLSRL--MTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 195
Query: 516 STDVYSYGILMLEVA 530
            +DV+++G+L+ E+A
Sbjct: 196 KSDVWAFGVLLWEIA 210

>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Length = 420

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 65/211 (30%), Positives = 101/211 (47%), Gaps = 19/211 (9%)
Query: 331 GFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLV 390
            + +  ++G+G FG VY+  +   G  VAIK++  + +   +E    +  M +L H N+V
Sbjct: 55  SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIV 110
Query: 391 QL----HGWCRKQDE--LLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQS 444
           +L    +    K+DE  L LV DYVP                    + + Y  +  + +S
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFRS 168
Query: 445 LLYLHEECNQRVVHRDVKPSNILLDTYLNA-KLGDFGLAKIYEHGANPQTTHIVGTLGYL 503
           L Y+H   +  + HRD+KP N+LLD      KL DFG AK    G  P  ++I     Y 
Sbjct: 169 LAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSYICSRY-YR 223
Query: 504 APELT-RTGKATTSTDVYSYGILMLEVACGR 533
           APEL       T+S DV+S G ++ E+  G+
Sbjct: 224 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 254

>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 93/195 (47%), Gaps = 11/195 (5%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +G G +G VY G+     L VA+K +  ++ + ++EF+ E   M  ++H NLVQL G C 
Sbjct: 26  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 398 KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQRVV 457
           ++    ++ +++  G+                       +   I+ ++ YL +   +  +
Sbjct: 85  REPPFYIITEFMTYGNLLDYLRECNRQEVNAVV---LLYMATQISSAMEYLEK---KNFI 138
Query: 458 HRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGT--LGYLAPELTRTGKATT 515
           HRD+   N L+      K+ DFGL+++     +  T H      + + APE     K + 
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRL--MTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 196
Query: 516 STDVYSYGILMLEVA 530
            +DV+++G+L+ E+A
Sbjct: 197 KSDVWAFGVLLWEIA 211

>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 93/195 (47%), Gaps = 11/195 (5%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +G G +G VY G+     L VA+K +  ++ + ++EF+ E   M  ++H NLVQL G C 
Sbjct: 23  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 398 KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQRVV 457
           ++    ++ +++  G+                       +   I+ ++ YL +   +  +
Sbjct: 82  REPPFYIITEFMTYGNLLDYLRECNRQEVNAVV---LLYMATQISSAMEYLEK---KNFI 135
Query: 458 HRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGT--LGYLAPELTRTGKATT 515
           HRD+   N L+      K+ DFGL+++     +  T H      + + APE     K + 
Sbjct: 136 HRDLAARNCLVGENHLVKVADFGLSRL--MTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 193
Query: 516 STDVYSYGILMLEVA 530
            +DV+++G+L+ E+A
Sbjct: 194 KSDVWAFGVLLWEIA 208

>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 53/209 (25%), Positives = 95/209 (45%), Gaps = 20/209 (9%)
Query: 338 VGSGGFGRVYRGLMPSLG-----LEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQL 392
           +G G FG+V+     +L      + VA+K +   +    K+F  E   +  L+H ++V+ 
Sbjct: 23  LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 393 HGWCRKQDELLLVYDYVPNGSXXXXXXX-----------XXXXXXXXXTWDQRYKILIGI 441
           +G C   D L++V++Y+ +G                               Q   I   I
Sbjct: 83  YGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQI 142
Query: 442 AQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IYEHGANPQTTHIVGTL 500
           A  ++YL    +Q  VHRD+   N L+   L  K+GDFG+++ +Y         H +  +
Sbjct: 143 ASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPI 199
Query: 501 GYLAPELTRTGKATTSTDVYSYGILMLEV 529
            ++ PE     K TT +DV+S+G+++ E+
Sbjct: 200 RWMPPESIMYRKFTTESDVWSFGVILWEI 228

>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 92/209 (44%), Gaps = 9/209 (4%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +G G FG V+ G        VAIK +   +    + F+ E   M +LRH  LVQL+    
Sbjct: 19  LGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYA-VV 75
Query: 398 KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQRVV 457
            ++ + +V +Y+  GS                   Q   +   IA  + Y+        V
Sbjct: 76  SEEPIYIVTEYMSKGSLLDFLKGETGKYLRL---PQLVDMAAQIASGMAYVE---RMNYV 129
Query: 458 HRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTST 517
           HRD++ +NIL+   L  K+ DFGLA++ E             + + APE    G+ T  +
Sbjct: 130 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 189
Query: 518 DVYSYGILMLEVACGRRSIEPQKAAAELL 546
           DV+S+GIL+ E+    R   P     E+L
Sbjct: 190 DVWSFGILLTELTTKGRVPYPGMVNREVL 218

>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp Length = 422

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 65/211 (30%), Positives = 101/211 (47%), Gaps = 19/211 (9%)
Query: 331 GFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLV 390
            + +  ++G+G FG VY+  +   G  VAIK++  + +   +E    +  M +L H N+V
Sbjct: 57  SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIV 112
Query: 391 QL----HGWCRKQDE--LLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQS 444
           +L    +    K+DE  L LV DYVP                    + + Y  +  + +S
Sbjct: 113 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFRS 170
Query: 445 LLYLHEECNQRVVHRDVKPSNILLDTYLNA-KLGDFGLAKIYEHGANPQTTHIVGTLGYL 503
           L Y+H   +  + HRD+KP N+LLD      KL DFG AK    G  P  ++I     Y 
Sbjct: 171 LAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSYICSRY-YR 225
Query: 504 APELTRTGKA-TTSTDVYSYGILMLEVACGR 533
           APEL       T+S DV+S G ++ E+  G+
Sbjct: 226 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 256

>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 90/195 (46%), Gaps = 10/195 (5%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +G G  G V    + S G  VA+K++    QQ  +    E++ M   +H N+V+++    
Sbjct: 39  IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 98
Query: 398 KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQRVV 457
             DEL +V +++  G+                  +Q   + + + Q+L  LH    Q V+
Sbjct: 99  VGDELWVVMEFLEGGALTDIVTHTRMNE------EQIAAVCLAVLQALSVLHA---QGVI 149
Query: 458 HRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTST 517
           HRD+K  +ILL      KL DFG          P+   +VGT  ++APEL          
Sbjct: 150 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV-PRRKXLVGTPYWMAPELISRLPYGPEV 208
Query: 518 DVYSYGILMLEVACG 532
           D++S GI+++E+  G
Sbjct: 209 DIWSLGIMVIEMVDG 223

>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 92/209 (44%), Gaps = 9/209 (4%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +G G FG V+ G        VAIK +   +    + F+ E   M +LRH  LVQL+    
Sbjct: 15  LGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYA-VV 71
Query: 398 KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQRVV 457
            ++ + +V +Y+  GS                   Q   +   IA  + Y+        V
Sbjct: 72  SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRL---PQLVDMAAQIASGMAYVE---RMNYV 125
Query: 458 HRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTST 517
           HRD++ +NIL+   L  K+ DFGLA++ E             + + APE    G+ T  +
Sbjct: 126 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 185
Query: 518 DVYSYGILMLEVACGRRSIEPQKAAAELL 546
           DV+S+GIL+ E+    R   P     E+L
Sbjct: 186 DVWSFGILLTELTTKGRVPYPGMVNREVL 214

>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 93/195 (47%), Gaps = 11/195 (5%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +G G +G VY G+     L VA+K +  ++ + ++EF+ E   M  ++H NLVQL G C 
Sbjct: 23  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 398 KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQRVV 457
           ++    ++ +++  G+                       +   I+ ++ YL +   +  +
Sbjct: 82  REPPFYIITEFMTYGNLLDYLRECNRQEVNAVV---LLYMATQISSAMEYLEK---KNFI 135
Query: 458 HRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGT--LGYLAPELTRTGKATT 515
           HRD+   N L+      K+ DFGL+++     +  T H      + + APE     K + 
Sbjct: 136 HRDLAARNCLVGENHLVKVADFGLSRLM--TGDTYTAHAGAKFPIKWTAPESLAYNKFSI 193
Query: 516 STDVYSYGILMLEVA 530
            +DV+++G+L+ E+A
Sbjct: 194 KSDVWAFGVLLWEIA 208

>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 66/215 (30%), Positives = 94/215 (43%), Gaps = 44/215 (20%)
Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVA--EIMSMGRLRHRNLVQLHG 394
           LVG G +G V +      G  VAIK+   +    M + +A  EI  + +LRH NLV L  
Sbjct: 32  LVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLE 91
Query: 395 WCRKQDELLLVYDYV-----------PNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQ 443
            C+K+    LV+++V           PNG                  +    K L  I  
Sbjct: 92  VCKKKKRWYLVFEFVDHTILDDLELFPNG----------------LDYQVVQKYLFQIIN 135
Query: 444 SLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHI--VGTLG 501
            + + H   +  ++HRD+KP NIL+      KL DFG A+     A P   +   V T  
Sbjct: 136 GIGFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFARTL---AAPGEVYDDEVATRW 189
Query: 502 YLAPEL----TRTGKATTSTDVYSYGILMLEVACG 532
           Y APEL     + GKA    DV++ G L+ E+  G
Sbjct: 190 YRAPELLVGDVKYGKA---VDVWAIGCLVTEMFMG 221

>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 92/209 (44%), Gaps = 9/209 (4%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +G G FG V+ G        VAIK +   +    + F+ E   M +LRH  LVQL+    
Sbjct: 192 LGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYA-VV 248
Query: 398 KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQRVV 457
            ++ + +V +Y+  GS                   Q   +   IA  + Y+        V
Sbjct: 249 SEEPIYIVTEYMSKGSLLDFLKGETGKYLRL---PQLVDMAAQIASGMAYVE---RMNYV 302
Query: 458 HRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTST 517
           HRD++ +NIL+   L  K+ DFGLA++ E             + + APE    G+ T  +
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 362
Query: 518 DVYSYGILMLEVACGRRSIEPQKAAAELL 546
           DV+S+GIL+ E+    R   P     E+L
Sbjct: 363 DVWSFGILLTELTTKGRVPYPGMVNREVL 391

>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 92/209 (44%), Gaps = 9/209 (4%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +G G FG V+ G        VAIK +   +    + F+ E   M +LRH  LVQL+    
Sbjct: 17  LGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYA-VV 73
Query: 398 KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQRVV 457
            ++ + +V +Y+  GS                   Q   +   IA  + Y+        V
Sbjct: 74  SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRL---PQLVDMAAQIASGMAYVE---RMNYV 127
Query: 458 HRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTST 517
           HRD++ +NIL+   L  K+ DFGLA++ E             + + APE    G+ T  +
Sbjct: 128 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 187
Query: 518 DVYSYGILMLEVACGRRSIEPQKAAAELL 546
           DV+S+GIL+ E+    R   P     E+L
Sbjct: 188 DVWSFGILLTELTTKGRVPYPGMVNREVL 216

>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 92/209 (44%), Gaps = 9/209 (4%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +G G FG V+ G        VAIK +   +    + F+ E   M +LRH  LVQL+    
Sbjct: 192 LGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYA-VV 248
Query: 398 KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQRVV 457
            ++ + +V +Y+  GS                   Q   +   IA  + Y+        V
Sbjct: 249 SEEPIYIVTEYMSKGSLLDFLKGETGKYLRL---PQLVDMAAQIASGMAYVE---RMNYV 302
Query: 458 HRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTST 517
           HRD++ +NIL+   L  K+ DFGLA++ E             + + APE    G+ T  +
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 362
Query: 518 DVYSYGILMLEVACGRRSIEPQKAAAELL 546
           DV+S+GIL+ E+    R   P     E+L
Sbjct: 363 DVWSFGILLTELTTKGRVPYPGMVNREVL 391

>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine Length = 424

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 65/210 (30%), Positives = 101/210 (48%), Gaps = 19/210 (9%)
Query: 332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQ 391
           + +  ++G+G FG VY+  +   G  VAIK++  + +   +E    +  M +L H N+V+
Sbjct: 60  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIVR 115
Query: 392 L----HGWCRKQDE--LLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSL 445
           L    +    K+DE  L LV DYVP                    + + Y  +  + +SL
Sbjct: 116 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFRSL 173
Query: 446 LYLHEECNQRVVHRDVKPSNILLDTYLNA-KLGDFGLAKIYEHGANPQTTHIVGTLGYLA 504
            Y+H   +  + HRD+KP N+LLD      KL DFG AK    G  P  ++I     Y A
Sbjct: 174 AYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSYICSRY-YRA 228
Query: 505 PELT-RTGKATTSTDVYSYGILMLEVACGR 533
           PEL       T+S DV+S G ++ E+  G+
Sbjct: 229 PELIFGATDYTSSIDVWSAGCVLAELLLGQ 258

>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/197 (28%), Positives = 92/197 (46%), Gaps = 12/197 (6%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +G G  G VY  +  + G EVAI+++    Q   +  + EI+ M   ++ N+V       
Sbjct: 29  IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 398 KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQRVV 457
             DEL +V +Y+  GS                   Q   +     Q+L +LH   + +V+
Sbjct: 89  VGDELWVVMEYLAGGSLTDVVTETCMDE------GQIAAVCRECLQALEFLH---SNQVI 139
Query: 458 HRDVKPSNILLDTYLNAKLGDFGL-AKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTS 516
           HRD+K  NILL    + KL DFG  A+I    +  + + +VGT  ++APE+         
Sbjct: 140 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS--KRSXMVGTPYWMAPEVVTRKAYGPK 197
Query: 517 TDVYSYGILMLEVACGR 533
            D++S GI+ +E+  G 
Sbjct: 198 VDIWSLGIMAIEMIEGE 214

>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 92/209 (44%), Gaps = 9/209 (4%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +G G FG V+ G        VAIK +   +    + F+ E   M +LRH  LVQL+    
Sbjct: 26  LGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYA-VV 82
Query: 398 KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQRVV 457
            ++ + +V +Y+  GS                   Q   +   IA  + Y+        V
Sbjct: 83  SEEPIYIVIEYMSKGSLLDFLKGEMGKYLRL---PQLVDMAAQIASGMAYVE---RMNYV 136
Query: 458 HRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTST 517
           HRD++ +NIL+   L  K+ DFGLA++ E             + + APE    G+ T  +
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 518 DVYSYGILMLEVACGRRSIEPQKAAAELL 546
           DV+S+GIL+ E+    R   P     E+L
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVL 225

>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide And Inhibitor 7d Length = 350

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 65/211 (30%), Positives = 100/211 (47%), Gaps = 19/211 (9%)
Query: 331 GFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLV 390
            + +  ++G+G FG VY+  +   G  VAIK++  + +   +E    +  M +L H N+V
Sbjct: 21  SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIV 76
Query: 391 QLHGWC----RKQDE--LLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQS 444
           +L  +      K+DE  L LV DYVP                    + + Y  +  + +S
Sbjct: 77  RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFRS 134
Query: 445 LLYLHEECNQRVVHRDVKPSNILLDTYLNA-KLGDFGLAKIYEHGANPQTTHIVGTLGYL 503
           L Y+H   +  + HRD+KP N+LLD      KL DFG AK    G  P  + I     Y 
Sbjct: 135 LAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSXICSRY-YR 189
Query: 504 APELTR-TGKATTSTDVYSYGILMLEVACGR 533
           APEL       T+S DV+S G ++ E+  G+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 220

>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 46/196 (23%), Positives = 91/196 (46%), Gaps = 7/196 (3%)
Query: 335 QNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHG 394
           ++ +G G +G VY G+     L VA+K +  ++ + ++EF+ E   M  ++H NLVQL G
Sbjct: 16  KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLG 74
Query: 395 WCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQ 454
            C ++    ++ +++  G+                       +   I+ ++ YL     +
Sbjct: 75  VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVV---LLYMATQISSAMEYLE---KK 128
Query: 455 RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKAT 514
             +HRD+   N L+      K+ DFGL+++               + + APE     K +
Sbjct: 129 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAYNKFS 188
Query: 515 TSTDVYSYGILMLEVA 530
             +DV+++G+L+ E+A
Sbjct: 189 IKSDVWAFGVLLWEIA 204

>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/302 (22%), Positives = 126/302 (41%), Gaps = 38/302 (12%)
Query: 316 GARRFKYAELASVTKGFGE-QNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQG---- 370
           G   F  + L ++     E +  +G GGFG V++G +      VAIK +     +G    
Sbjct: 4   GGSEFPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEM 63
Query: 371 ---MKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXX 427
               +EF  E+  M  L H N+V+L+G         +V ++VP G               
Sbjct: 64  IEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGD----LYHRLLDKAH 117
Query: 428 XXTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTY-----LNAKLGDFGLA 482
              W  + ++++ IA  + Y+  + N  +VHRD++  NI L +      + AK+ DFG +
Sbjct: 118 PIKWSVKLRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTS 176
Query: 483 KIYEHGANPQTTHIVGTLGYLAPEL--TRTGKATTSTDVYSYGILMLEVACGRRSIEPQK 540
           +   H      + ++G   ++APE         T   D YS+ +++  +  G    + + 
Sbjct: 177 QQSVHS----VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD-EY 231
Query: 541 AAAELLLVDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRV 600
           +  ++  ++ ++E  L   I +     L            N+   C + +P  RP    +
Sbjct: 232 SYGKIKFINMIREEGLRPTIPEDCPPRLR-----------NVIELCWSGDPKKRPHFSYI 280
Query: 601 VE 602
           V+
Sbjct: 281 VK 282

>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With Lapatinib Length = 328

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 105/227 (46%), Gaps = 31/227 (13%)
Query: 314 QCGARRFKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLG----LEVAIKRIGHNSQQ 369
           Q   R  K  EL  V        ++GSG FG VY+G+    G    + VAIK +  N   
Sbjct: 6   QAQLRILKETELKRV-------KVLGSGAFGTVYKGIWVPEGETVKIPVAIKIL--NETT 56
Query: 370 GMK---EFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXX-- 424
           G K   EF+ E + M  + H +LV+L G C     + LV   +P+G              
Sbjct: 57  GPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQLVTQLMPHGCLLEYVHEHKDNIG 115
Query: 425 XXXXXTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKI 484
                 W       + IA+ ++YL E   +R+VHRD+   N+L+ +  + K+ DFGLA++
Sbjct: 116 SQLLLNW------CVQIAKGMMYLEE---RRLVHRDLAARNVLVKSPNHVKITDFGLARL 166
Query: 485 YEHGANPQTTHIVGTL--GYLAPELTRTGKATTSTDVYSYGILMLEV 529
            E G   +     G +   ++A E     K T  +DV+SYG+ + E+
Sbjct: 167 LE-GDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWEL 212

>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 56/197 (28%), Positives = 92/197 (46%), Gaps = 12/197 (6%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +G G  G VY  +  + G EVAI+++    Q   +  + EI+ M   ++ N+V       
Sbjct: 28  IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 398 KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQRVV 457
             DEL +V +Y+  GS                   Q   +     Q+L +LH   + +V+
Sbjct: 88  VGDELWVVMEYLAGGSLTDVVTETCMDE------GQIAAVCRECLQALEFLH---SNQVI 138
Query: 458 HRDVKPSNILLDTYLNAKLGDFGL-AKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTS 516
           HRD+K  NILL    + KL DFG  A+I    +  + + +VGT  ++APE+         
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS--KRSXMVGTPYWMAPEVVTRKAYGPK 196
Query: 517 TDVYSYGILMLEVACGR 533
            D++S GI+ +E+  G 
Sbjct: 197 VDIWSLGIMAIEMIEGE 213

>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/200 (31%), Positives = 99/200 (49%), Gaps = 15/200 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQ-QGMKE-FVAEIMSMGRLRHRNLVQLHGW 395
           VG G +G VY+    S G  VA+KRI  +++ +G+    + EI  +  L H N+V L   
Sbjct: 29  VGEGTYGVVYKA-KDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDV 87
Query: 396 CRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQ- 454
              +  L LV++++                         Y++L G+A         C+Q 
Sbjct: 88  IHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKI-YLYQLLRGVAH--------CHQH 138
Query: 455 RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPE-LTRTGKA 513
           R++HRD+KP N+L+++    KL DFGLA+ +        TH V TL Y AP+ L  + K 
Sbjct: 139 RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVR-SYTHEVVTLWYRAPDVLMGSKKY 197
Query: 514 TTSTDVYSYGILMLEVACGR 533
           +TS D++S G +  E+  G+
Sbjct: 198 STSVDIWSIGCIFAEMITGK 217

>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/200 (31%), Positives = 99/200 (49%), Gaps = 15/200 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQ-QGMKEF-VAEIMSMGRLRHRNLVQLHGW 395
           VG G +G VY+    S G  VA+KRI  +++ +G+    + EI  +  L H N+V L   
Sbjct: 29  VGEGTYGVVYKA-KDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDV 87
Query: 396 CRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQ- 454
              +  L LV++++                         Y++L G+A         C+Q 
Sbjct: 88  IHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKI-YLYQLLRGVAH--------CHQH 138
Query: 455 RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPE-LTRTGKA 513
           R++HRD+KP N+L+++    KL DFGLA+ +        TH V TL Y AP+ L  + K 
Sbjct: 139 RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVR-SYTHEVVTLWYRAPDVLMGSKKY 197
Query: 514 TTSTDVYSYGILMLEVACGR 533
           +TS D++S G +  E+  G+
Sbjct: 198 STSVDIWSIGCIFAEMITGK 217

>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor Length = 465

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 65/210 (30%), Positives = 101/210 (48%), Gaps = 19/210 (9%)
Query: 332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQ 391
           + +  ++G+G FG VY+  +   G  VAIK++  + +   +E    +  M +L H N+V+
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIVR 156
Query: 392 L----HGWCRKQDE--LLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSL 445
           L    +    K+DE  L LV DYVP                    + + Y  +  + +SL
Sbjct: 157 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFRSL 214
Query: 446 LYLHEECNQRVVHRDVKPSNILLDTYLNA-KLGDFGLAKIYEHGANPQTTHIVGTLGYLA 504
            Y+H   +  + HRD+KP N+LLD      KL DFG AK    G  P  ++I     Y A
Sbjct: 215 AYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSYICSRY-YRA 269
Query: 505 PELTRTGKA-TTSTDVYSYGILMLEVACGR 533
           PEL       T+S DV+S G ++ E+  G+
Sbjct: 270 PELIFGATDYTSSIDVWSAGCVLAELLLGQ 299

>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase 3beta In Complex With An Inhibitor Length = 350

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 65/211 (30%), Positives = 100/211 (47%), Gaps = 19/211 (9%)
Query: 331 GFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLV 390
            + +  ++G+G FG VY+  +   G  VAIK++  + +   +E    +  M +L H N+V
Sbjct: 22  SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIV 77
Query: 391 QLHGWC----RKQDE--LLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQS 444
           +L  +      K+DE  L LV DYVP                    + + Y  +  + +S
Sbjct: 78  RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFRS 135
Query: 445 LLYLHEECNQRVVHRDVKPSNILLDTYLNA-KLGDFGLAKIYEHGANPQTTHIVGTLGYL 503
           L Y+H   +  + HRD+KP N+LLD      KL DFG AK    G  P  + I     Y 
Sbjct: 136 LAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSXICSRY-YR 190
Query: 504 APELTR-TGKATTSTDVYSYGILMLEVACGR 533
           APEL       T+S DV+S G ++ E+  G+
Sbjct: 191 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 221

>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 92/195 (47%), Gaps = 19/195 (9%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHG-WC 396
           +G G FG V  G     G +VA+K I +++    + F+AE   M +LRH NLVQL G   
Sbjct: 20  IGKGEFGDVMLG--DYRGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIV 75
Query: 397 RKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQRV 456
            ++  L +V +Y+  GS                  D   K  + + +++ YL        
Sbjct: 76  EEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGG---DCLLKFSLDVCEAMEYLE---GNNF 129
Query: 457 VHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTL--GYLAPELTRTGKAT 514
           VHRD+   N+L+     AK+ DFGL K         +T   G L   + APE  R    +
Sbjct: 130 VHRDLAARNVLVSEDNVAKVSDFGLTK------EASSTQDTGKLPVKWTAPEALREAAFS 183
Query: 515 TSTDVYSYGILMLEV 529
           T +DV+S+GIL+ E+
Sbjct: 184 TKSDVWSFGILLWEI 198

>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 92/209 (44%), Gaps = 9/209 (4%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +G G FG V+ G        VAIK +   +    + F+ E   M +LRH  LVQL+    
Sbjct: 26  LGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYA-VV 82
Query: 398 KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQRVV 457
            ++ + +V +Y+  GS                   Q   +   IA  + Y+        V
Sbjct: 83  SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRL---PQLVDMAAQIASGMAYVE---RMNYV 136
Query: 458 HRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTST 517
           HRD++ +NIL+   L  K+ DFGLA++ E             + + APE    G+ T  +
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 518 DVYSYGILMLEVACGRRSIEPQKAAAELL 546
           DV+S+GIL+ E+    R   P     E+L
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVL 225

>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/302 (22%), Positives = 126/302 (41%), Gaps = 38/302 (12%)
Query: 316 GARRFKYAELASVTKGFGE-QNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQG---- 370
           G   F  + L ++     E +  +G GGFG V++G +      VAIK +     +G    
Sbjct: 4   GGSEFPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEM 63
Query: 371 ---MKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXX 427
               +EF  E+  M  L H N+V+L+G         +V ++VP G               
Sbjct: 64  IEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGD----LYHRLLDKAH 117
Query: 428 XXTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTY-----LNAKLGDFGLA 482
              W  + ++++ IA  + Y+  + N  +VHRD++  NI L +      + AK+ DF L+
Sbjct: 118 PIKWSVKLRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLS 176
Query: 483 KIYEHGANPQTTHIVGTLGYLAPEL--TRTGKATTSTDVYSYGILMLEVACGRRSIEPQK 540
           +   H      + ++G   ++APE         T   D YS+ +++  +  G    + + 
Sbjct: 177 QQSVHS----VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD-EY 231
Query: 541 AAAELLLVDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRV 600
           +  ++  ++ ++E  L   I +     L            N+   C + +P  RP    +
Sbjct: 232 SYGKIKFINMIREEGLRPTIPEDCPPRLR-----------NVIELCWSGDPKKRPHFSYI 280
Query: 601 VE 602
           V+
Sbjct: 281 VK 282

>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis- (Indole)maleimide Pyridinophane Inhibitor Length = 352

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 65/211 (30%), Positives = 100/211 (47%), Gaps = 19/211 (9%)
Query: 331 GFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLV 390
            + +  ++G+G FG VY+  +   G  VAIK++  + +   +E    +  M +L H N+V
Sbjct: 21  SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIV 76
Query: 391 QLHGWC----RKQDE--LLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQS 444
           +L  +      K+DE  L LV DYVP                    + + Y  +  + +S
Sbjct: 77  RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFRS 134
Query: 445 LLYLHEECNQRVVHRDVKPSNILLDTYLNA-KLGDFGLAKIYEHGANPQTTHIVGTLGYL 503
           L Y+H   +  + HRD+KP N+LLD      KL DFG AK    G  P  + I     Y 
Sbjct: 135 LAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSXICSRY-YR 189
Query: 504 APELTR-TGKATTSTDVYSYGILMLEVACGR 533
           APEL       T+S DV+S G ++ E+  G+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 220

>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 92/209 (44%), Gaps = 9/209 (4%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +G G FG V+ G        VAIK +   +    + F+ E   M +LRH  LVQL+    
Sbjct: 26  LGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYA-VV 82
Query: 398 KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQRVV 457
            ++ + +V +Y+  GS                   Q   +   IA  + Y+        V
Sbjct: 83  SEEPIYIVCEYMSKGSLLDFLKGEMGKYLRL---PQLVDMAAQIASGMAYVE---RMNYV 136
Query: 458 HRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTST 517
           HRD++ +NIL+   L  K+ DFGLA++ E             + + APE    G+ T  +
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 518 DVYSYGILMLEVACGRRSIEPQKAAAELL 546
           DV+S+GIL+ E+    R   P     E+L
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVL 225

>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With Frattide Peptide Length = 378

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 65/211 (30%), Positives = 100/211 (47%), Gaps = 19/211 (9%)
Query: 331 GFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLV 390
            + +  ++G+G FG VY+  +   G  VAIK++  + +   +E    +  M +L H N+V
Sbjct: 40  SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIV 95
Query: 391 QLHGWC----RKQDE--LLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQS 444
           +L  +      K+DE  L LV DYVP                    + + Y  +  + +S
Sbjct: 96  RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFRS 153
Query: 445 LLYLHEECNQRVVHRDVKPSNILLDTYLNA-KLGDFGLAKIYEHGANPQTTHIVGTLGYL 503
           L Y+H   +  + HRD+KP N+LLD      KL DFG AK    G  P  + I     Y 
Sbjct: 154 LAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSXICSRY-YR 208
Query: 504 APELTR-TGKATTSTDVYSYGILMLEVACGR 533
           APEL       T+S DV+S G ++ E+  G+
Sbjct: 209 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 239

>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective Gsk-3 Inhibitors Length = 367

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 65/211 (30%), Positives = 100/211 (47%), Gaps = 19/211 (9%)
Query: 331 GFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLV 390
            + +  ++G+G FG VY+  +   G  VAIK++  + +   +E    +  M +L H N+V
Sbjct: 29  SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIV 84
Query: 391 QLHGWC----RKQDE--LLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQS 444
           +L  +      K+DE  L LV DYVP                    + + Y  +  + +S
Sbjct: 85  RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFRS 142
Query: 445 LLYLHEECNQRVVHRDVKPSNILLDTYLNA-KLGDFGLAKIYEHGANPQTTHIVGTLGYL 503
           L Y+H   +  + HRD+KP N+LLD      KL DFG AK    G  P  + I     Y 
Sbjct: 143 LAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSXICSRY-YR 197
Query: 504 APELTR-TGKATTSTDVYSYGILMLEVACGR 533
           APEL       T+S DV+S G ++ E+  G+
Sbjct: 198 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 228

>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 52/217 (23%), Positives = 103/217 (47%), Gaps = 24/217 (11%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +G+G FG V+ G   +   +VA+K +   +   ++ F+ E   M  L+H  LV+L+    
Sbjct: 20  LGAGQFGEVWMGYYNN-STKVAVKTLKPGTM-SVQAFLEEANLMKTLQHDKLVRLYAVVT 77
Query: 398 KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILI--------GIAQSLLYLH 449
           K++ + ++ +++  GS                  D+  K+L+         IA+ + Y+ 
Sbjct: 78  KEEPIYIITEFMAKGSLLDFLKS-----------DEGGKVLLPKLIDFSAQIAEGMAYIE 126
Query: 450 EECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTR 509
               +  +HRD++ +N+L+   L  K+ DFGLA++ E             + + APE   
Sbjct: 127 ---RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAIN 183
Query: 510 TGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELL 546
            G  T  ++V+S+GIL+ E+    +   P +  A+++
Sbjct: 184 FGCFTIKSNVWSFGILLYEIVTYGKIPYPGRTNADVM 220

>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Imidazopyridine Inhibitor Length = 382

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 65/211 (30%), Positives = 100/211 (47%), Gaps = 19/211 (9%)
Query: 331 GFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLV 390
            + +  ++G+G FG VY+  +   G  VAIK++  + +   +E    +  M +L H N+V
Sbjct: 33  SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIV 88
Query: 391 QLHGWC----RKQDE--LLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQS 444
           +L  +      K+DE  L LV DYVP                    + + Y  +  + +S
Sbjct: 89  RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFRS 146
Query: 445 LLYLHEECNQRVVHRDVKPSNILLDTYLNA-KLGDFGLAKIYEHGANPQTTHIVGTLGYL 503
           L Y+H   +  + HRD+KP N+LLD      KL DFG AK    G  P  + I     Y 
Sbjct: 147 LAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSXICSRY-YR 201
Query: 504 APELTRTGKA-TTSTDVYSYGILMLEVACGR 533
           APEL       T+S DV+S G ++ E+  G+
Sbjct: 202 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 232

>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-3beta Inhibitors Length = 371

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 65/211 (30%), Positives = 100/211 (47%), Gaps = 19/211 (9%)
Query: 331 GFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLV 390
            + +  ++G+G FG VY+  +   G  VAIK++  + +   +E    +  M +L H N+V
Sbjct: 33  SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIV 88
Query: 391 QLHGWC----RKQDE--LLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQS 444
           +L  +      K+DE  L LV DYVP                    + + Y  +  + +S
Sbjct: 89  RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFRS 146
Query: 445 LLYLHEECNQRVVHRDVKPSNILLDTYLNA-KLGDFGLAKIYEHGANPQTTHIVGTLGYL 503
           L Y+H   +  + HRD+KP N+LLD      KL DFG AK    G  P  + I     Y 
Sbjct: 147 LAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSXICSRY-YR 201
Query: 504 APELTRTGKA-TTSTDVYSYGILMLEVACGR 533
           APEL       T+S DV+S G ++ E+  G+
Sbjct: 202 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 232

>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine Inhibitor Length = 321

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 105/227 (46%), Gaps = 31/227 (13%)
Query: 314 QCGARRFKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLG----LEVAIKRIGHNSQQ 369
           Q   R  K  EL  V        ++GSG FG VY+G+    G    + VAIK +  N   
Sbjct: 29  QAQLRILKETELKRV-------KVLGSGAFGTVYKGIWVPEGETVKIPVAIKIL--NETT 79
Query: 370 GMK---EFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXX-- 424
           G K   EF+ E + M  + H +LV+L G C     + LV   +P+G              
Sbjct: 80  GPKANVEFMDEALIMASMDHPHLVRLLGVCL-SPTIQLVTQLMPHGCLLEYVHEHKDNIG 138
Query: 425 XXXXXTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKI 484
                 W       + IA+ ++YL E   +R+VHRD+   N+L+ +  + K+ DFGLA++
Sbjct: 139 SQLLLNW------CVQIAKGMMYLEE---RRLVHRDLAARNVLVKSPNHVKITDFGLARL 189
Query: 485 YEHGANPQTTHIVGTL--GYLAPELTRTGKATTSTDVYSYGILMLEV 529
            E G   +     G +   ++A E     K T  +DV+SYG+ + E+
Sbjct: 190 LE-GDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWEL 235

>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex Length = 353

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 65/211 (30%), Positives = 100/211 (47%), Gaps = 19/211 (9%)
Query: 331 GFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLV 390
            + +  ++G+G FG VY+  +   G  VAIK++  + +   +E    +  M +L H N+V
Sbjct: 25  SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIV 80
Query: 391 QLHGWC----RKQDE--LLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQS 444
           +L  +      K+DE  L LV DYVP                    + + Y  +  + +S
Sbjct: 81  RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFRS 138
Query: 445 LLYLHEECNQRVVHRDVKPSNILLDTYLNA-KLGDFGLAKIYEHGANPQTTHIVGTLGYL 503
           L Y+H   +  + HRD+KP N+LLD      KL DFG AK    G  P  + I     Y 
Sbjct: 139 LAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSXICSRY-YR 193
Query: 504 APELTR-TGKATTSTDVYSYGILMLEVACGR 533
           APEL       T+S DV+S G ++ E+  G+
Sbjct: 194 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 224

>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma Gondii, Tgme49_018720 Length = 285

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 98/195 (50%), Gaps = 15/195 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHN-SQQGMKEFVAEIMSMGRLRHRNLVQLHGWC 396
           +GSG FG V+     S GLE  IK I  + SQ  M++  AEI  +  L H N++++    
Sbjct: 30  LGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVF 89
Query: 397 RKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRY--KILIGIAQSLLYLHEECNQ 454
                + +V +    G                    + Y  +++  +  +L Y H   +Q
Sbjct: 90  EDYHNMYIVMETCEGGELLERIVSAQARGK---ALSEGYVAELMKQMMNALAYFH---SQ 143
Query: 455 RVVHRDVKPSNILL-DTYLNA--KLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTG 511
            VVH+D+KP NIL  DT  ++  K+ DFGLA++++  ++  +T+  GT  Y+APE+ +  
Sbjct: 144 HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK--SDEHSTNAAGTALYMAPEVFKRD 201
Query: 512 KATTSTDVYSYGILM 526
             T   D++S G++M
Sbjct: 202 -VTFKCDIWSAGVVM 215

>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/199 (26%), Positives = 95/199 (47%), Gaps = 17/199 (8%)
Query: 335 QNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHG 394
           +  +G+G FG V+     +   +VA+K +   S   ++ F+AE   M  L+H  LV+LH 
Sbjct: 20  EKKLGAGQFGEVWMATY-NKHTKVAVKTMKPGSM-SVEAFLAEANVMKTLQHDKLVKLHA 77
Query: 395 WCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIG----IAQSLLYLHE 450
              K+  + ++ +++  GS                   Q    LI     IA+ + ++ +
Sbjct: 78  VVTKEP-IYIITEFMAKGSLLDFLKSDEGS-------KQPLPKLIDFSAQIAEGMAFIEQ 129
Query: 451 ECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRT 510
              +  +HRD++ +NIL+   L  K+ DFGLA++ E             + + APE    
Sbjct: 130 ---RNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINF 186
Query: 511 GKATTSTDVYSYGILMLEV 529
           G  T  +DV+S+GIL++E+
Sbjct: 187 GSFTIKSDVWSFGILLMEI 205

>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 92/209 (44%), Gaps = 9/209 (4%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +G G FG V+ G        VAIK +   +    + F+ E   M +LRH  LVQL+    
Sbjct: 192 LGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYA-VV 248
Query: 398 KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQRVV 457
            ++ + +V +Y+  GS                   Q   +   IA  + Y+        V
Sbjct: 249 SEEPIYIVGEYMSKGSLLDFLKGETGKYLRL---PQLVDMAAQIASGMAYVE---RMNYV 302
Query: 458 HRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTST 517
           HRD++ +NIL+   L  K+ DFGLA++ E             + + APE    G+ T  +
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 362
Query: 518 DVYSYGILMLEVACGRRSIEPQKAAAELL 546
           DV+S+GIL+ E+    R   P     E+L
Sbjct: 363 DVWSFGILLTELTTKGRVPYPGMVNREVL 391

>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide Length = 350

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/211 (31%), Positives = 99/211 (46%), Gaps = 19/211 (9%)
Query: 331 GFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLV 390
            + +  ++G+G FG VY+  +   G  VAIK++     QG      E+  M +L H N+V
Sbjct: 21  SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQGKAFKNRELQIMRKLDHCNIV 76
Query: 391 QLHGWC----RKQDE--LLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQS 444
           +L  +      K+DE  L LV DYVP                    + + Y  +  + +S
Sbjct: 77  RLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLY--MYQLFRS 134
Query: 445 LLYLHEECNQRVVHRDVKPSNILLDTYLNA-KLGDFGLAKIYEHGANPQTTHIVGTLGYL 503
           L Y+H   +  + HRD+KP N+LLD      KL DFG AK    G  P  + I     Y 
Sbjct: 135 LAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSXICSRY-YR 189
Query: 504 APELTR-TGKATTSTDVYSYGILMLEVACGR 533
           APEL       T+S DV+S G ++ E+  G+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 220

>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3 Length = 308

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/205 (29%), Positives = 93/205 (45%), Gaps = 22/205 (10%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIK--RIGHNSQQGMKEFVAEIMSMGRLR------HRNL 389
           +G G +G VY+   P  G  VA+K  R+ +    G    ++ +  +  LR      H N+
Sbjct: 17  IGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNV 76
Query: 390 VQLHGWCR-----KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQS 444
           V+L   C      ++ ++ LV+++V                      D   + L G    
Sbjct: 77  VRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRG---- 132
Query: 445 LLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLA 504
           L +LH  C   +VHRD+KP NIL+ +    KL DFGLA+IY +      T +V TL Y A
Sbjct: 133 LDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQM--ALTPVVVTLWYRA 187
Query: 505 PELTRTGKATTSTDVYSYGILMLEV 529
           PE+       T  D++S G +  E+
Sbjct: 188 PEVLLQSTYATPVDMWSVGCIFAEM 212

>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 65/272 (23%), Positives = 116/272 (42%), Gaps = 26/272 (9%)
Query: 332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIG-HNSQQGMKEFVAEIMSMGRLRHRNLV 390
           F +   +G G FG V++G+       VAIK I    ++  +++   EI  + +     + 
Sbjct: 25  FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVT 84
Query: 391 QLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHE 450
           + +G   K  +L ++ +Y+  GS                T      +L  I + L YLH 
Sbjct: 85  KYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIAT------MLKEILKGLDYLHS 138
Query: 451 ECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRT 510
           E   + +HRD+K +N+LL    + KL DFG+A         + T  VGT  ++APE+ + 
Sbjct: 139 E---KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNT-FVGTPFWMAPEVIQQ 194
Query: 511 GKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDY 570
               +  D++S GI  +E+A G            L L+       L G+ T++  + +D 
Sbjct: 195 SAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNPPTLVGDFTKSFKEFIDA 254
Query: 571 YDLAEAELVLNLGLFCSAPNPVYRPDMRRVVE 602
                          C   +P +RP  + +++
Sbjct: 255 ---------------CLNKDPSFRPTAKELLK 271

>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 90/195 (46%), Gaps = 10/195 (5%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +G G  G V    + S G  VA+K++    QQ  +    E++ M   +H N+V+++    
Sbjct: 82  IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 141
Query: 398 KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQRVV 457
             DEL +V +++  G+                  +Q   + + + Q+L  LH    Q V+
Sbjct: 142 VGDELWVVMEFLEGGA------LTDIVTHTRMNEEQIAAVCLAVLQALSVLHA---QGVI 192
Query: 458 HRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTST 517
           HRD+K  +ILL      KL DFG          P+   +VGT  ++APEL          
Sbjct: 193 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV-PRRKXLVGTPYWMAPELISRLPYGPEV 251
Query: 518 DVYSYGILMLEVACG 532
           D++S GI+++E+  G
Sbjct: 252 DIWSLGIMVIEMVDG 266

>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta (Gsk3b) In Complex With Inhibitor 142 Length = 430

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 65/211 (30%), Positives = 100/211 (47%), Gaps = 19/211 (9%)
Query: 331 GFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLV 390
            + +  ++G+G FG VY+  +   G  VAIK++  + +   +E    +  M +L H N+V
Sbjct: 55  SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIV 110
Query: 391 QL----HGWCRKQDE--LLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQS 444
           +L    +    K+DE  L LV DYVP                    + + Y  +  + +S
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFRS 168
Query: 445 LLYLHEECNQRVVHRDVKPSNILLDTYLNA-KLGDFGLAKIYEHGANPQTTHIVGTLGYL 503
           L Y+H   +  + HRD+KP N+LLD      KL DFG AK    G  P  + I     Y 
Sbjct: 169 LAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSXICSRY-YR 223
Query: 504 APELT-RTGKATTSTDVYSYGILMLEVACGR 533
           APEL       T+S DV+S G ++ E+  G+
Sbjct: 224 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 254

>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 52/195 (26%), Positives = 88/195 (45%), Gaps = 10/195 (5%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +G G  G V        G +VA+K +    QQ  +    E++ M   +H N+V+++    
Sbjct: 53  IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYL 112
Query: 398 KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQRVV 457
             +EL ++ +++  G+                T      +   + Q+L YLH    Q V+
Sbjct: 113 VGEELWVLMEFLQGGALTDIVSQVRLNEEQIAT------VCEAVLQALAYLH---AQGVI 163
Query: 458 HRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTST 517
           HRD+K  +ILL      KL DFG          P+   +VGT  ++APE+       T  
Sbjct: 164 HRDIKSDSILLTLDGRVKLSDFGFCAQISKDV-PKRKXLVGTPYWMAPEVISRSLYATEV 222
Query: 518 DVYSYGILMLEVACG 532
           D++S GI+++E+  G
Sbjct: 223 DIWSLGIMVIEMVDG 237

>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex With A Staurosporine Analogue Length = 290

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 70/275 (25%), Positives = 117/275 (42%), Gaps = 33/275 (12%)
Query: 338 VGSGGFGRV----YRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLH 393
           +G G FG V    Y  L  + G  VA+K++ H+     ++F  EI  +  L    +V+  
Sbjct: 15  LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 74
Query: 394 G--WCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEE 451
           G  +   + EL LV +Y+P+G                    QR++  +  ++ LLY  + 
Sbjct: 75  GVSYGPGRPELRLVMEYLPSGCLRDFL--------------QRHRARLDASRLLLYSSQI 120
Query: 452 C-------NQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVG--TLGY 502
           C       ++R VHRD+   NIL+++  + K+ DFGLAK+     +       G   + +
Sbjct: 121 CKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFW 180
Query: 503 LAPELTRTGKATTSTDVYSYGILMLEV--ACGRRSIEPQKAAAELLLVDWVKELHLEGEI 560
            APE       +  +DV+S+G+++ E+   C  +S  P      ++  +           
Sbjct: 181 YAPESLSDNIFSRQSDVWSFGVVLYELFTYCD-KSCSPSAEFLRMMGCERDVPALCRLLE 239
Query: 561 TQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRP 595
                Q L       AE V  L   C AP+P  RP
Sbjct: 240 LLEEGQRLPAPPACPAE-VHELMKLCWAPSPQDRP 273

>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 92/209 (44%), Gaps = 9/209 (4%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +G G FG V+ G        VAIK +   +    + F+ E   M +LRH  LVQL+    
Sbjct: 23  LGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYA-VV 79
Query: 398 KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQRVV 457
            ++ + +V +Y+  GS                   Q   +   IA  + Y+        V
Sbjct: 80  SEEPIYIVTEYMNKGSLLDFLKGETGKYLRL---PQLVDMSAQIASGMAYVE---RMNYV 133
Query: 458 HRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTST 517
           HRD++ +NIL+   L  K+ DFGLA++ E             + + APE    G+ T  +
Sbjct: 134 HRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTIKS 193
Query: 518 DVYSYGILMLEVACGRRSIEPQKAAAELL 546
           DV+S+GIL+ E+    R   P     E+L
Sbjct: 194 DVWSFGILLTELTTKGRVPYPGMVNREVL 222

>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 92/209 (44%), Gaps = 9/209 (4%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +G G FG V+ G        VAIK +   +    + F+ E   M +LRH  LVQL+    
Sbjct: 23  LGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYA-VV 79
Query: 398 KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQRVV 457
            ++ + +V +Y+  GS                   Q   +   IA  + Y+        V
Sbjct: 80  SEEPIYIVTEYMNKGSLLDFLKGETGKYLRL---PQLVDMSAQIASGMAYVE---RMNYV 133
Query: 458 HRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTST 517
           HRD++ +NIL+   L  K+ DFGLA++ E             + + APE    G+ T  +
Sbjct: 134 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 193
Query: 518 DVYSYGILMLEVACGRRSIEPQKAAAELL 546
           DV+S+GIL+ E+    R   P     E+L
Sbjct: 194 DVWSFGILLTELTTKGRVPYPGMVNREVL 222

>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 92/209 (44%), Gaps = 9/209 (4%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +G G FG V+ G        VAIK +   +    + F+ E   M ++RH  LVQL+    
Sbjct: 26  LGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSP-EAFLQEAQVMKKIRHEKLVQLYA-VV 82
Query: 398 KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQRVV 457
            ++ + +V +Y+  GS                   Q   +   IA  + Y+        V
Sbjct: 83  SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRL---PQLVDMAAQIASGMAYVE---RMNYV 136
Query: 458 HRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTST 517
           HRD++ +NIL+   L  K+ DFGLA++ E             + + APE    G+ T  +
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 518 DVYSYGILMLEVACGRRSIEPQKAAAELL 546
           DV+S+GIL+ E+    R   P     E+L
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVL 225

>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535

Iteration: 1
 Score = 70.1 bits (170), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 92/209 (44%), Gaps = 9/209 (4%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +G G FG V+ G        VAIK +   +    + F+ E   M +LRH  LVQL+    
Sbjct: 275 LGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYA-VV 331
Query: 398 KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQRVV 457
            ++ + +V +Y+  GS                   Q   +   IA  + Y+        V
Sbjct: 332 SEEPIYIVTEYMSKGSLLDFLKGETGKYLRL---PQLVDMAAQIASGMAYVE---RMNYV 385
Query: 458 HRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTST 517
           HRD++ +NIL+   L  K+ DFGLA++ E             + + APE    G+ T  +
Sbjct: 386 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 445
Query: 518 DVYSYGILMLEVACGRRSIEPQKAAAELL 546
           DV+S+GIL+ E+    R   P     E+L
Sbjct: 446 DVWSFGILLTELTTKGRVPYPGMVNREVL 474

>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310

Iteration: 1
 Score = 70.1 bits (170), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 51/215 (23%), Positives = 92/215 (42%), Gaps = 21/215 (9%)
Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWC 396
           ++G G FG+  +      G  + +K +    ++  + F+ E+  M  L H N+++  G  
Sbjct: 17  VLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVL 76
Query: 397 RKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQRV 456
            K   L  + +Y+  G+                 W QR      IA  + YLH   +  +
Sbjct: 77  YKDKRLNFITEYIKGGT----LRGIIKSMDSQYPWSQRVSFAKDIASGMAYLH---SMNI 129
Query: 457 VHRDVKPSNILLDTYLNAKLGDFGLAKIY-EHGANPQTTH------------IVGTLGYL 503
           +HRD+   N L+    N  + DFGLA++  +    P+               +VG   ++
Sbjct: 130 IHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWM 189
Query: 504 APELTRTGKATTSTDVYSYGILMLEVACGRRSIEP 538
           APE+          DV+S+GI++ E+  GR + +P
Sbjct: 190 APEMINGRSYDEKVDVFSFGIVLCEII-GRVNADP 223

>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A Thiazolopyrimidine Inhibitor Length = 324

Iteration: 1
 Score = 70.1 bits (170), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 55/215 (25%), Positives = 101/215 (46%), Gaps = 30/215 (13%)
Query: 335 QNLVGSGGFGRVYRGLMPSLGL--EVAIKRIG-HNSQQGMKEFVAEIMSMGRL-RHRNLV 390
           Q+++G G FG+V +  +   GL  + AIKR+  + S+   ++F  E+  + +L  H N++
Sbjct: 27  QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 86
Query: 391 QLHGWCRKQDELLLVYDYVPNGS-----------XXXXXXXXXXXXXXXXTWDQRYKILI 439
            L G C  +  L L  +Y P+G+                           +  Q      
Sbjct: 87  NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 146
Query: 440 GIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGT 499
            +A+ + YL +   ++ +HR++   NIL+     AK+ DFGL++        Q  ++  T
Sbjct: 147 DVARGMDYLSQ---KQFIHRNLAARNILVGENYVAKIADFGLSR-------GQEVYVKKT 196
Query: 500 LG-----YLAPELTRTGKATTSTDVYSYGILMLEV 529
           +G     ++A E       TT++DV+SYG+L+ E+
Sbjct: 197 MGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEI 231

>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286

Iteration: 1
 Score = 70.1 bits (170), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 91/209 (43%), Gaps = 9/209 (4%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +G G FG V+ G        VAIK +   +    + F+ E   M +LRH  LVQL+    
Sbjct: 26  LGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYA-VV 82
Query: 398 KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQRVV 457
            ++ + +V +Y+  GS                   Q   +   IA  + Y+        V
Sbjct: 83  SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRL---PQLVDMAAQIASGMAYVE---RMNYV 136
Query: 458 HRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTST 517
           HRD+  +NIL+   L  K+ DFGLA++ E             + + APE    G+ T  +
Sbjct: 137 HRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 518 DVYSYGILMLEVACGRRSIEPQKAAAELL 546
           DV+S+GIL+ E+    R   P     E+L
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVL 225

>pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423

Iteration: 1
 Score = 70.1 bits (170), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 90/195 (46%), Gaps = 10/195 (5%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +G G  G V    + S G  VA+K++    QQ  +    E++ M   +H N+V+++    
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 218
Query: 398 KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQRVV 457
             DEL +V +++  G+                  +Q   + + + Q+L  LH    Q V+
Sbjct: 219 VGDELWVVMEFLEGGALTDIVTHTRMNE------EQIAAVCLAVLQALSVLHA---QGVI 269
Query: 458 HRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTST 517
           HRD+K  +ILL      KL DFG          P+   +VGT  ++APEL          
Sbjct: 270 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV-PRRKXLVGTPYWMAPELISRLPYGPEV 328
Query: 518 DVYSYGILMLEVACG 532
           D++S GI+++E+  G
Sbjct: 329 DIWSLGIMVIEMVDG 343

>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292

Iteration: 1
 Score = 70.1 bits (170), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 62/231 (26%), Positives = 106/231 (45%), Gaps = 31/231 (13%)
Query: 309 EDWEIQCGARRFKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIK--RIGHN 366
           +DWEI  G           +T G      +GSG FG VY+G       +VA+K   +   
Sbjct: 17  DDWEIPDG----------QITVG----QRIGSGSFGTVYKGKWHG---DVAVKMLNVTAP 59
Query: 367 SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXX 426
           + Q ++ F  E+  + + RH N++   G+  K  +L +V  +    S             
Sbjct: 60  TPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHASETKFE 118
Query: 427 XXXTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLA-KIY 485
                D    I    A+ + YLH +    ++HRD+K +NI L      K+GDFGLA +  
Sbjct: 119 MKKLID----IARQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKS 171
Query: 486 EHGANPQTTHIVGTLGYLAPELTRTGKA---TTSTDVYSYGILMLEVACGR 533
               + Q   + G++ ++APE+ R   +   +  +DVY++GI++ E+  G+
Sbjct: 172 RWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 222

>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain Kinase Loc340156. Length = 373

Iteration: 1
 Score = 70.1 bits (170), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 91/191 (47%), Gaps = 11/191 (5%)
Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWC 396
           ++G G FG+V++    + GL++A K I     +  +E   EI  M +L H NL+QL+   
Sbjct: 96  ILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAF 155
Query: 397 RKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQRV 456
             +++++LV +YV  G                 T       +  I + + ++H+     +
Sbjct: 156 ESKNDIVLVMEYVDGGELFDRIIDESYNLTELDT----ILFMKQICEGIRHMHQ---MYI 208
Query: 457 VHRDVKPSNILL--DTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKAT 514
           +H D+KP NIL         K+ DFGLA+ Y+     +     GT  +LAPE+      +
Sbjct: 209 LHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVN--FGTPEFLAPEVVNYDFVS 266
Query: 515 TSTDVYSYGIL 525
             TD++S G++
Sbjct: 267 FPTDMWSVGVI 277

>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286

Iteration: 1
 Score = 70.1 bits (170), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 91/209 (43%), Gaps = 9/209 (4%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +G G FG V+ G        VAIK +   +    + F+ E   M +LRH  LVQL+    
Sbjct: 26  LGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYA-VV 82
Query: 398 KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQRVV 457
            ++ + +V +Y+  G                    Q   +   IA  + Y+        V
Sbjct: 83  SEEPIYIVMEYMSKGCLLDFLKGEMGKYLRL---PQLVDMAAQIASGMAYVE---RMNYV 136
Query: 458 HRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTST 517
           HRD++ +NIL+   L  K+ DFGLA++ E             + + APE    G+ T  +
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 518 DVYSYGILMLEVACGRRSIEPQKAAAELL 546
           DV+S+GIL+ E+    R   P     E+L
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVL 225

>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 70.1 bits (170), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 90/196 (45%), Gaps = 10/196 (5%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +G G  G VY  +  + G EVAI+++    Q   +  + EI+ M   ++ N+V       
Sbjct: 29  IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 398 KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQRVV 457
             DEL +V +Y+  GS                   Q   +     Q+L +LH   + +V+
Sbjct: 89  VGDELWVVMEYLAGGSLTDVVTETCMDE------GQIAAVCRECLQALEFLH---SNQVI 139
Query: 458 HRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTST 517
           HR++K  NILL    + KL DFG         + ++T +VGT  ++APE+          
Sbjct: 140 HRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST-MVGTPYWMAPEVVTRKAYGPKV 198
Query: 518 DVYSYGILMLEVACGR 533
           D++S GI+ +E+  G 
Sbjct: 199 DIWSLGIMAIEMIEGE 214

>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318

Iteration: 1
 Score = 70.1 bits (170), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 95/205 (46%), Gaps = 22/205 (10%)
Query: 329 TKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRN 388
           T  FG  +L+ S   GR Y   +    + V +K++ H +         E + +  + H  
Sbjct: 16  TGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTND--------ERLMLSIVTHPF 67
Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYL 448
           ++++ G  +   ++ ++ DY+  G                  +   Y   + +A  L YL
Sbjct: 68  IIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKF---YAAEVCLA--LEYL 122
Query: 449 HEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTH-IVGTLGYLAPEL 507
           H   ++ +++RD+KP NILLD   + K+ DFG AK       P  T+ + GT  Y+APE+
Sbjct: 123 H---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYV-----PDVTYXLCGTPDYIAPEV 174
Query: 508 TRTGKATTSTDVYSYGILMLEVACG 532
             T     S D +S+GIL+ E+  G
Sbjct: 175 VSTKPYNKSIDWWSFGILIYEMLAG 199

>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp Length = 354

Iteration: 1
 Score = 70.1 bits (170), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 40/107 (37%), Positives = 65/107 (60%), Gaps = 7/107 (6%)
Query: 436 KILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLA-KIYEHGANPQTT 494
           K+ I + + L YL E+   +++HRDVKPSNIL+++    KL DFG++ ++ +  AN    
Sbjct: 118 KVSIAVLRGLAYLREK--HQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN---- 171
Query: 495 HIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKA 541
             VGT  Y+APE  +    +  +D++S G+ ++E+A GR  I P  A
Sbjct: 172 SFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPIPPPDA 218

>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer Length = 395

Iteration: 1
 Score = 70.1 bits (170), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 65/107 (60%), Gaps = 7/107 (6%)
Query: 436 KILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLA-KIYEHGANPQTT 494
           K+ I + + L YL E+   +++HRDVKPSNIL+++    KL DFG++ ++ +  AN    
Sbjct: 170 KVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN---- 223
Query: 495 HIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKA 541
             VGT  Y++PE  +    +  +D++S G+ ++E+A GR  I P  A
Sbjct: 224 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDA 270

>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp Length = 328

Iteration: 1
 Score = 69.7 bits (169), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 65/107 (60%), Gaps = 7/107 (6%)
Query: 436 KILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLA-KIYEHGANPQTT 494
           K+ I + + L YL E+   +++HRDVKPSNIL+++    KL DFG++ ++ +  AN    
Sbjct: 108 KVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN---- 161
Query: 495 HIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKA 541
             VGT  Y++PE  +    +  +D++S G+ ++E+A GR  I P  A
Sbjct: 162 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDA 208

>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound Length = 322

Iteration: 1
 Score = 69.7 bits (169), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 65/107 (60%), Gaps = 7/107 (6%)
Query: 436 KILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLA-KIYEHGANPQTT 494
           K+ I + + L YL E+   +++HRDVKPSNIL+++    KL DFG++ ++ +  AN    
Sbjct: 108 KVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN---- 161
Query: 495 HIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKA 541
             VGT  Y++PE  +    +  +D++S G+ ++E+A GR  I P  A
Sbjct: 162 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDA 208

>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 69.7 bits (169), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 93/205 (45%), Gaps = 19/205 (9%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIG-HNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWC 396
           +G G +G V         + VAIK+I     Q   +  + EI  + R RH N++ ++   
Sbjct: 33  IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 92
Query: 397 R-----KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEE 451
           R     +  ++ +V D +                    + D     L  I + L Y+H  
Sbjct: 93  RAPTIEQMKDVYIVQDLMETD-------LYKLLKTQHLSNDHICYFLYQILRGLKYIH-- 143
Query: 452 CNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIY--EHGANPQTTHIVGTLGYLAPELTR 509
            +  V+HRD+KPSN+LL+T  + K+ DFGLA++   +H      T  V T  Y APE+  
Sbjct: 144 -SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 202
Query: 510 TGKA-TTSTDVYSYGILMLEVACGR 533
             K  T S D++S G ++ E+   R
Sbjct: 203 NSKGYTKSIDIWSVGCILAEMLSNR 227

>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 333

Iteration: 1
 Score = 69.7 bits (169), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 65/107 (60%), Gaps = 7/107 (6%)
Query: 436 KILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLA-KIYEHGANPQTT 494
           K+ I + + L YL E+   +++HRDVKPSNIL+++    KL DFG++ ++ +  AN    
Sbjct: 108 KVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN---- 161
Query: 495 HIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKA 541
             VGT  Y++PE  +    +  +D++S G+ ++E+A GR  I P  A
Sbjct: 162 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDA 208

>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453

Iteration: 1
 Score = 69.7 bits (169), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 93/211 (44%), Gaps = 13/211 (6%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRI--GHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGW 395
           +G G FG V+ G        VAIK +  G+ S +    F+ E   M +LRH  LVQL+  
Sbjct: 193 LGQGCFGEVWMGTWNGT-TRVAIKTLKPGNMSPEA---FLQEAQVMKKLRHEKLVQLYA- 247
Query: 396 CRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQR 455
              ++ + +V +Y+  GS                   Q   +   IA  + Y+       
Sbjct: 248 VVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRL---PQLVDMAAQIASGMAYVE---RMN 301
Query: 456 VVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATT 515
            VHRD++ +NIL+   L  K+ DFGL ++ E             + + APE    G+ T 
Sbjct: 302 YVHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 361
Query: 516 STDVYSYGILMLEVACGRRSIEPQKAAAELL 546
            +DV+S+GIL+ E+    R   P     E+L
Sbjct: 362 KSDVWSFGILLTELTTKGRVPYPGMVNREVL 392

>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 341

Iteration: 1
 Score = 69.7 bits (169), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 65/107 (60%), Gaps = 7/107 (6%)
Query: 436 KILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLA-KIYEHGANPQTT 494
           K+ I + + L YL E+   +++HRDVKPSNIL+++    KL DFG++ ++ +  AN    
Sbjct: 108 KVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN---- 161
Query: 495 HIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKA 541
             VGT  Y++PE  +    +  +D++S G+ ++E+A GR  I P  A
Sbjct: 162 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDA 208

>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265

Iteration: 1
 Score = 69.7 bits (169), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 50/192 (26%), Positives = 89/192 (46%), Gaps = 9/192 (4%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +G+G FG V  G       +VAIK I   S     EF+ E   M  L H  LVQL+G C 
Sbjct: 17  LGTGQFGVVKYGKWRG-QYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCT 74
Query: 398 KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQRVV 457
           KQ  + ++ +Y+ NG                    Q  ++   + +++ YL    +++ +
Sbjct: 75  KQRPIFIITEYMANGCLLNYLREMRHRFQT----QQLLEMCKDVCEAMEYLE---SKQFL 127
Query: 458 HRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTST 517
           HRD+   N L++     K+ DFGL++         +      + +  PE+    K ++ +
Sbjct: 128 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKFSSKS 187
Query: 518 DVYSYGILMLEV 529
           D++++G+LM E+
Sbjct: 188 DIWAFGVLMWEI 199

>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454

Iteration: 1
 Score = 69.7 bits (169), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 56/216 (25%), Positives = 101/216 (46%), Gaps = 17/216 (7%)
Query: 335 QNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHG 394
           +  +G+G FG V+     +   +VA+K +   S   ++ F+AE   M  L+H  LV+LH 
Sbjct: 193 EKKLGAGQFGEVWMATY-NKHTKVAVKTMKPGSM-SVEAFLAEANVMKTLQHDKLVKLHA 250
Query: 395 WCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIG----IAQSLLYLHE 450
              K+  + ++ +++  GS                   Q    LI     IA+ + ++ +
Sbjct: 251 VVTKEP-IYIITEFMAKGSLLDFLKSDEGSK-------QPLPKLIDFSAQIAEGMAFIEQ 302
Query: 451 ECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRT 510
              +  +HRD++ +NIL+   L  K+ DFGLA++ E             + + APE    
Sbjct: 303 ---RNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINF 359
Query: 511 GKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELL 546
           G  T  +DV+S+GIL++E+    R   P  +  E++
Sbjct: 360 GSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVI 395

>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57 Length = 360

Iteration: 1
 Score = 69.7 bits (169), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 93/205 (45%), Gaps = 19/205 (9%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIG-HNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWC 396
           +G G +G V         + VAIK+I     Q   +  + EI  + R RH N++ ++   
Sbjct: 31  IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 397 R-----KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEE 451
           R     +  ++ +V D +                    + D     L  I + L Y+H  
Sbjct: 91  RAPTIEQMKDVYIVQDLMETD-------LYKLLKTQHLSNDHICYFLYQILRGLKYIH-- 141
Query: 452 CNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIY--EHGANPQTTHIVGTLGYLAPELTR 509
            +  V+HRD+KPSN+LL+T  + K+ DFGLA++   +H      T  V T  Y APE+  
Sbjct: 142 -SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 510 TGKA-TTSTDVYSYGILMLEVACGR 533
             K  T S D++S G ++ E+   R
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNR 225

>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Su11274 Length = 302

Iteration: 1
 Score = 69.7 bits (169), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 100/210 (47%), Gaps = 25/210 (11%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +G G FG+VY+      G   A K I   S++ +++++ EI  +    H  +V+L G   
Sbjct: 27  LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 398 KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQRVV 457
              +L ++ ++ P G+                T  Q   +   + ++L +LH   ++R++
Sbjct: 87  HDGKLWIMIEFCPGGA----VDAIMLELDRGLTEPQIQVVCRQMLEALNFLH---SKRII 139
Query: 458 HRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTH----IVGTLGYLAPE--LTRTG 511
           HRD+K  N+L+    + +L DFG++       N +T       +GT  ++APE  +  T 
Sbjct: 140 HRDLKAGNVLMTLEGDIRLADFGVS-----AKNLKTLQKRDSFIGTPYWMAPEVVMCETM 194
Query: 512 KATT---STDVYSYGILMLEVACGRRSIEP 538
           K T      D++S GI ++E+A     IEP
Sbjct: 195 KDTPYDYKADIWSLGITLIEMA----QIEP 220

>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment Length = 336

Iteration: 1
 Score = 69.7 bits (169), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 60/204 (29%), Positives = 96/204 (47%), Gaps = 23/204 (11%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKE------FVAEIMSMGRLRHRNLVQ 391
           +G G FG+V          +VA+K I   S+Q +K+         EI  +  LRH ++++
Sbjct: 17  LGEGSFGKVKLATHYKTQQKVALKFI---SRQLLKKSDMHMRVEREISYLKLLRHPHIIK 73
Query: 392 LHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEE 451
           L+       ++++V +Y                     T D+  +    I  ++ Y H  
Sbjct: 74  LYDVITTPTDIVMVIEYAGG------ELFDYIVEKKRMTEDEGRRFFQQIICAIEYCH-- 125
Query: 452 CNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTG 511
              ++VHRD+KP N+LLD  LN K+ DFGL+ I   G   +T+   G+  Y APE+   G
Sbjct: 126 -RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTS--CGSPNYAAPEVI-NG 181
Query: 512 K--ATTSTDVYSYGILMLEVACGR 533
           K  A    DV+S GI++  +  GR
Sbjct: 182 KLYAGPEVDVWSCGIVLYVMLVGR 205

>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Novel Bosutinib Isoform 1, Previously Thought To Be Bosutinib Length = 293

Iteration: 1
 Score = 69.7 bits (169), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 100/210 (47%), Gaps = 25/210 (11%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +G G FG+VY+      G   A K I   S++ +++++ EI  +    H  +V+L G   
Sbjct: 19  LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 398 KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQRVV 457
              +L ++ ++ P G+                T  Q   +   + ++L +LH   ++R++
Sbjct: 79  HDGKLWIMIEFCPGGA----VDAIMLELDRGLTEPQIQVVCRQMLEALNFLH---SKRII 131
Query: 458 HRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTH----IVGTLGYLAPE--LTRTG 511
           HRD+K  N+L+    + +L DFG++       N +T       +GT  ++APE  +  T 
Sbjct: 132 HRDLKAGNVLMTLEGDIRLADFGVS-----AKNLKTLQKRDSFIGTPYWMAPEVVMCETM 186
Query: 512 KATT---STDVYSYGILMLEVACGRRSIEP 538
           K T      D++S GI ++E+A     IEP
Sbjct: 187 KDTPYDYKADIWSLGITLIEMA----QIEP 212

>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286

Iteration: 1
 Score = 69.7 bits (169), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 91/209 (43%), Gaps = 9/209 (4%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +G G FG V+ G        VAIK +   +    + F+ E   M +LRH  LVQL+    
Sbjct: 26  LGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYA-VV 82
Query: 398 KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQRVV 457
            ++ + +V +Y+  G                    Q   +   IA  + Y+        V
Sbjct: 83  SEEPIYIVTEYMSKGCLLDFLKGEMGKYLRL---PQLVDMAAQIASGMAYVE---RMNYV 136
Query: 458 HRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTST 517
           HRD++ +NIL+   L  K+ DFGLA++ E             + + APE    G+ T  +
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 518 DVYSYGILMLEVACGRRSIEPQKAAAELL 546
           DV+S+GIL+ E+    R   P     E+L
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVL 225

>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Pyrazolopyridazine Derivative Length = 368

Iteration: 1
 Score = 69.7 bits (169), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 93/205 (45%), Gaps = 19/205 (9%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIG-HNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWC 396
           +G G +G V         + VAIK+I     Q   +  + EI  + R RH N++ ++   
Sbjct: 39  IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 98
Query: 397 R-----KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEE 451
           R     +  ++ +V D +                    + D     L  I + L Y+H  
Sbjct: 99  RAPTIEQMKDVYIVQDLMETD-------LYKLLKTQHLSNDHICYFLYQILRGLKYIH-- 149
Query: 452 CNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIY--EHGANPQTTHIVGTLGYLAPELTR 509
            +  V+HRD+KPSN+LL+T  + K+ DFGLA++   +H      T  V T  Y APE+  
Sbjct: 150 -SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 208
Query: 510 TGKA-TTSTDVYSYGILMLEVACGR 533
             K  T S D++S G ++ E+   R
Sbjct: 209 NSKGYTKSIDIWSVGCILAEMLSNR 233

>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule Inhibitor Length = 368

Iteration: 1
 Score = 69.7 bits (169), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 93/205 (45%), Gaps = 19/205 (9%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIG-HNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWC 396
           +G G +G V         + VAIK+I     Q   +  + EI  + R RH N++ ++   
Sbjct: 31  IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 397 R-----KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEE 451
           R     +  ++ +V D +                    + D     L  I + L Y+H  
Sbjct: 91  RAPTIEQMKDVYIVQDLMETD-------LYKLLKTQHLSNDHICYFLYQILRGLKYIH-- 141
Query: 452 CNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIY--EHGANPQTTHIVGTLGYLAPELTR 509
            +  V+HRD+KPSN+LL+T  + K+ DFGLA++   +H      T  V T  Y APE+  
Sbjct: 142 -SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 510 TGKA-TTSTDVYSYGILMLEVACGR 533
             K  T S D++S G ++ E+   R
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNR 225

>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Ternary Complex With Compound 1, Atp-Gs And Mg2p Length = 360

Iteration: 1
 Score = 69.3 bits (168), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 65/107 (60%), Gaps = 7/107 (6%)
Query: 436 KILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLA-KIYEHGANPQTT 494
           K+ I + + L YL E+   +++HRDVKPSNIL+++    KL DFG++ ++ +  AN    
Sbjct: 135 KVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN---- 188
Query: 495 HIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKA 541
             VGT  Y++PE  +    +  +D++S G+ ++E+A GR  I P  A
Sbjct: 189 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDA 235

>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With N,n-dimethyl-4-(4- Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide Length = 380

Iteration: 1
 Score = 69.3 bits (168), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 93/205 (45%), Gaps = 19/205 (9%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQG-MKEFVAEIMSMGRLRHRNLVQLHGWC 396
           +G G +G V         + VAIK+I     Q   +  + EI  + R RH N++ ++   
Sbjct: 51  IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 110
Query: 397 R-----KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEE 451
           R     +  ++ +V D +                    + D     L  I + L Y+H  
Sbjct: 111 RAPTIEQMKDVYIVQDLMETD-------LYKLLKTQHLSNDHICYFLYQILRGLKYIH-- 161
Query: 452 CNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIY--EHGANPQTTHIVGTLGYLAPELTR 509
            +  V+HRD+KPSN+LL+T  + K+ DFGLA++   +H      T  V T  Y APE+  
Sbjct: 162 -SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 220
Query: 510 TGKA-TTSTDVYSYGILMLEVACGR 533
             K  T S D++S G ++ E+   R
Sbjct: 221 NSKGYTKSIDIWSVGCILAEMLSNR 245

>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75 Length = 360

Iteration: 1
 Score = 69.3 bits (168), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 93/205 (45%), Gaps = 19/205 (9%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIG-HNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWC 396
           +G G +G V         + VAIK+I     Q   +  + EI  + R RH N++ ++   
Sbjct: 31  IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 397 R-----KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEE 451
           R     +  ++ +V D +                    + D     L  I + L Y+H  
Sbjct: 91  RAPTIEQMKDVYIVQDLMETD-------LYKLLKTQHLSNDHICYFLYQILRGLKYIH-- 141
Query: 452 CNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIY--EHGANPQTTHIVGTLGYLAPELTR 509
            +  V+HRD+KPSN+LL+T  + K+ DFGLA++   +H      T  V T  Y APE+  
Sbjct: 142 -SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 510 TGKA-TTSTDVYSYGILMLEVACGR 533
             K  T S D++S G ++ E+   R
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNR 225

>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) Length = 350

Iteration: 1
 Score = 69.3 bits (168), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 55/218 (25%), Positives = 96/218 (44%), Gaps = 17/218 (7%)
Query: 321 KYAELASVTKG-FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIM 379
           KY  L  + +G FG+  LV S   GR Y      +  E+ I R+   S +  +E   E+ 
Sbjct: 25  KYVRLQKIGEGSFGKAILVKSTEDGRQY------VIKEINISRM---SSKEREESRREVA 75
Query: 380 SMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILI 439
            +  ++H N+VQ      +   L +V DY   G                   DQ     +
Sbjct: 76  VLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQE---DQILDWFV 132
Query: 440 GIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGT 499
            I  +L ++H   +++++HRD+K  NI L      +LGDFG+A++            +GT
Sbjct: 133 QICLALKHVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVE-LARACIGT 188
Query: 500 LGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIE 537
             YL+PE+         +D+++ G ++ E+   + + E
Sbjct: 189 PYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFE 226

>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94 Length = 360

Iteration: 1
 Score = 69.3 bits (168), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 93/205 (45%), Gaps = 19/205 (9%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIG-HNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWC 396
           +G G +G V         + VAIK+I     Q   +  + EI  + R RH N++ ++   
Sbjct: 31  IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 397 R-----KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEE 451
           R     +  ++ +V D +                    + D     L  I + L Y+H  
Sbjct: 91  RAPTIEQMKDVYIVQDLMETD-------LYKLLKTQHLSNDHICYFLYQILRGLKYIH-- 141
Query: 452 CNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIY--EHGANPQTTHIVGTLGYLAPELTR 509
            +  V+HRD+KPSN+LL+T  + K+ DFGLA++   +H      T  V T  Y APE+  
Sbjct: 142 -SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 510 TGKA-TTSTDVYSYGILMLEVACGR 533
             K  T S D++S G ++ E+   R
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNR 225

>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5 Length = 288

Iteration: 1
 Score = 69.3 bits (168), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 54/198 (27%), Positives = 96/198 (48%), Gaps = 13/198 (6%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIG-HNSQQGMKEF-VAEIMSMGRLRHRNLVQLHGW 395
           +G G +G VY+    + G   A+K+I      +G+    + EI  +  L+H N+V+L+  
Sbjct: 10  IGEGTYGVVYKA-QNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 396 CRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQR 455
              +  L+LV++++                            L+ +   + Y H   ++R
Sbjct: 69  IHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAK-----SFLLQLLNGIAYCH---DRR 120
Query: 456 VVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPE-LTRTGKAT 514
           V+HRD+KP N+L++     K+ DFGLA+ +      + TH V TL Y AP+ L  + K +
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLARAFGIPVR-KYTHEVVTLWYRAPDVLMGSKKYS 179
Query: 515 TSTDVYSYGILMLEVACG 532
           T+ D++S G +  E+  G
Sbjct: 180 TTIDIWSVGCIFAEMVNG 197

>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol Length = 360

Iteration: 1
 Score = 69.3 bits (168), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 93/205 (45%), Gaps = 19/205 (9%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIG-HNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWC 396
           +G G +G V         + VAIK+I     Q   +  + EI  + R RH N++ ++   
Sbjct: 31  IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 397 R-----KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEE 451
           R     +  ++ +V D +                    + D     L  I + L Y+H  
Sbjct: 91  RAPTIEQMKDVYIVQDLMETD-------LYKLLKTQHLSNDHICYFLYQILRGLKYIH-- 141
Query: 452 CNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIY--EHGANPQTTHIVGTLGYLAPELTR 509
            +  V+HRD+KPSN+LL+T  + K+ DFGLA++   +H      T  V T  Y APE+  
Sbjct: 142 -SANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 510 TGKA-TTSTDVYSYGILMLEVACGR 533
             K  T S D++S G ++ E+   R
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNR 225

>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 69.3 bits (168), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 93/205 (45%), Gaps = 19/205 (9%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIG-HNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWC 396
           +G G +G V         + VAIK+I     Q   +  + EI  + R RH N++ ++   
Sbjct: 36  IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 397 R-----KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEE 451
           R     +  ++ +V D +                    + D     L  I + L Y+H  
Sbjct: 96  RAPTIEQMKDVYIVQDLMETD-------LYKLLKTQHLSNDHICYFLYQILRGLKYIH-- 146
Query: 452 CNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIY--EHGANPQTTHIVGTLGYLAPELTR 509
            +  V+HRD+KPSN+LL+T  + K+ DFGLA++   +H      T  V T  Y APE+  
Sbjct: 147 -SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 205
Query: 510 TGKA-TTSTDVYSYGILMLEVACGR 533
             K  T S D++S G ++ E+   R
Sbjct: 206 NSKGYTKSIDIWSVGCILAEMLSNR 230

>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin 2-Yl]amino}phenyl)acetic Acid Length = 366

Iteration: 1
 Score = 69.3 bits (168), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 93/205 (45%), Gaps = 19/205 (9%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIG-HNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWC 396
           +G G +G V         + VAIK+I     Q   +  + EI  + R RH N++ ++   
Sbjct: 37  IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 96
Query: 397 R-----KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEE 451
           R     +  ++ +V D +                    + D     L  I + L Y+H  
Sbjct: 97  RAPTIEQMKDVYIVQDLMETD-------LYKLLKTQHLSNDHICYFLYQILRGLKYIH-- 147
Query: 452 CNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIY--EHGANPQTTHIVGTLGYLAPELTR 509
            +  V+HRD+KPSN+LL+T  + K+ DFGLA++   +H      T  V T  Y APE+  
Sbjct: 148 -SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 206
Query: 510 TGKA-TTSTDVYSYGILMLEVACGR 533
             K  T S D++S G ++ E+   R
Sbjct: 207 NSKGYTKSIDIWSVGCILAEMLSNR 231

>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently Bound Length = 357

Iteration: 1
 Score = 69.3 bits (168), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 93/205 (45%), Gaps = 19/205 (9%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIG-HNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWC 396
           +G G +G V         + VAIK+I     Q   +  + EI  + R RH N++ ++   
Sbjct: 28  IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 87
Query: 397 R-----KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEE 451
           R     +  ++ +V D +                    + D     L  I + L Y+H  
Sbjct: 88  RAPTIEQMKDVYIVQDLMETD-------LYKLLKTQHLSNDHICYFLYQILRGLKYIH-- 138
Query: 452 CNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIY--EHGANPQTTHIVGTLGYLAPELTR 509
            +  V+HRD+KPSN+LL+T  + K+ DFGLA++   +H      T  V T  Y APE+  
Sbjct: 139 -SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 197
Query: 510 TGKA-TTSTDVYSYGILMLEVACGR 533
             K  T S D++S G ++ E+   R
Sbjct: 198 NSKGYTKSIDIWSVGCILAEMLSNR 222

>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived From Mkp3 Length = 364

Iteration: 1
 Score = 69.3 bits (168), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 93/205 (45%), Gaps = 19/205 (9%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIG-HNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWC 396
           +G G +G V         + VAIK+I     Q   +  + EI  + R RH N++ ++   
Sbjct: 35  IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 397 R-----KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEE 451
           R     +  ++ +V D +                    + D     L  I + L Y+H  
Sbjct: 95  RAPTIEQMKDVYIVQDLMETD-------LYKLLKTQHLSNDHICYFLYQILRGLKYIH-- 145
Query: 452 CNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIY--EHGANPQTTHIVGTLGYLAPELTR 509
            +  V+HRD+KPSN+LL+T  + K+ DFGLA++   +H      T  V T  Y APE+  
Sbjct: 146 -SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 510 TGKA-TTSTDVYSYGILMLEVACGR 533
             K  T S D++S G ++ E+   R
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNR 229

>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate Ligand Complex Length = 288

Iteration: 1
 Score = 69.3 bits (168), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 54/198 (27%), Positives = 96/198 (48%), Gaps = 13/198 (6%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIG-HNSQQGMKEF-VAEIMSMGRLRHRNLVQLHGW 395
           +G G +G VY+    + G   A+K+I      +G+    + EI  +  L+H N+V+L+  
Sbjct: 10  IGEGTYGVVYKA-QNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 396 CRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQR 455
              +  L+LV++++                            L+ +   + Y H   ++R
Sbjct: 69  IHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAK-----SFLLQLLNGIAYCH---DRR 120
Query: 456 VVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPE-LTRTGKAT 514
           V+HRD+KP N+L++     K+ DFGLA+ +      + TH V TL Y AP+ L  + K +
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLARAFGIPVR-KYTHEVVTLWYRAPDVLMGSKKYS 179
Query: 515 TSTDVYSYGILMLEVACG 532
           T+ D++S G +  E+  G
Sbjct: 180 TTIDIWSVGCIFAEMVNG 197

>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length = 358

Iteration: 1
 Score = 69.3 bits (168), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 93/205 (45%), Gaps = 19/205 (9%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIG-HNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWC 396
           +G G +G V         + VAIK+I     Q   +  + EI  + R RH N++ ++   
Sbjct: 29  IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 397 R-----KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEE 451
           R     +  ++ +V D +                    + D     L  I + L Y+H  
Sbjct: 89  RAPTIEQMKDVYIVQDLMETD-------LYKLLKTQHLSNDHICYFLYQILRGLKYIH-- 139
Query: 452 CNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIY--EHGANPQTTHIVGTLGYLAPELTR 509
            +  V+HRD+KPSN+LL+T  + K+ DFGLA++   +H      T  V T  Y APE+  
Sbjct: 140 -SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 198
Query: 510 TGKA-TTSTDVYSYGILMLEVACGR 533
             K  T S D++S G ++ E+   R
Sbjct: 199 NSKGYTKSIDIWSVGCILAEMLSNR 223

>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e) Length = 358

Iteration: 1
 Score = 69.3 bits (168), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 93/205 (45%), Gaps = 19/205 (9%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIG-HNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWC 396
           +G G +G V         + VAIK+I     Q   +  + EI  + R RH N++ ++   
Sbjct: 29  IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 397 R-----KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEE 451
           R     +  ++ +V D +                    + D     L  I + L Y+H  
Sbjct: 89  RAPTIEQMKDVYIVQDLMETD-------LYKLLKTQHLSNDHICYFLYQILRGLKYIH-- 139
Query: 452 CNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIY--EHGANPQTTHIVGTLGYLAPELTR 509
            +  V+HRD+KPSN+LL+T  + K+ DFGLA++   +H      T  V T  Y APE+  
Sbjct: 140 -SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 198
Query: 510 TGKA-TTSTDVYSYGILMLEVACGR 533
             K  T S D++S G ++ E+   R
Sbjct: 199 NSKGYTKSIDIWSVGCILAEMLSNR 223

>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 69.3 bits (168), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 93/205 (45%), Gaps = 19/205 (9%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIG-HNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWC 396
           +G G +G V         + VAIK+I     Q   +  + EI  + R RH N++ ++   
Sbjct: 35  IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 397 R-----KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEE 451
           R     +  ++ +V D +                    + D     L  I + L Y+H  
Sbjct: 95  RAPTIEQMKDVYIVQDLMETD-------LYKLLKCQHLSNDHICYFLYQILRGLKYIH-- 145
Query: 452 CNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIY--EHGANPQTTHIVGTLGYLAPELTR 509
            +  V+HRD+KPSN+LL+T  + K+ DFGLA++   +H      T  V T  Y APE+  
Sbjct: 146 -SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 510 TGKA-TTSTDVYSYGILMLEVACGR 533
             K  T S D++S G ++ E+   R
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNR 229

>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294

Iteration: 1
 Score = 69.3 bits (168), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 69/275 (25%), Positives = 118/275 (42%), Gaps = 32/275 (11%)
Query: 332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIG-HNSQQGMKEFVAEIMSMGRLRHRNLV 390
           F +   +G G FG V++G+       VAIK I    ++  +++   EI  + +     + 
Sbjct: 29  FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 88
Query: 391 QLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHE 450
           + +G   K  +L ++ +Y+  GS                T      IL  I + L YLH 
Sbjct: 89  KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIAT------ILREILKGLDYLHS 142
Query: 451 ECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRT 510
           E   + +HRD+K +N+LL  +   KL DFG+A         + T  VGT  ++APE+ + 
Sbjct: 143 E---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT-FVGTPFWMAPEVIKQ 198
Query: 511 GKATTSTDVYSYGILMLEVACGR---RSIEPQKAAAELLLVDWVKELHLEGEITQAIDQT 567
               +  D++S GI  +E+A G      + P K    L L+       LEG  ++ + + 
Sbjct: 199 SAYDSKADIWSLGITAIELARGEPPHSELHPMKV---LFLIPKNNPPTLEGNYSKPLKE- 254
Query: 568 LDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVE 602
                  EA         C    P +RP  + +++
Sbjct: 255 -----FVEA---------CLNKEPSFRPTAKELLK 275

>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495

Iteration: 1
 Score = 69.3 bits (168), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 47/198 (23%), Positives = 95/198 (47%), Gaps = 11/198 (5%)
Query: 335 QNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHG 394
           ++ +G G +G VY G+     L VA+K +  ++ + ++EF+ E   M  ++H NLVQL G
Sbjct: 225 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLG 283
Query: 395 WCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQ 454
            C ++    ++ +++  G+                       +   I+ ++ YL +   +
Sbjct: 284 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVV---LLYMATQISSAMEYLEK---K 337
Query: 455 RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGT--LGYLAPELTRTGK 512
             +HR++   N L+      K+ DFGL+++     +  T H      + + APE     K
Sbjct: 338 NFIHRNLAARNCLVGENHLVKVADFGLSRLM--TGDTYTAHAGAKFPIKWTAPESLAYNK 395
Query: 513 ATTSTDVYSYGILMLEVA 530
            +  +DV+++G+L+ E+A
Sbjct: 396 FSIKSDVWAFGVLLWEIA 413

>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2 Length = 364

Iteration: 1
 Score = 68.9 bits (167), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 93/205 (45%), Gaps = 19/205 (9%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIG-HNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWC 396
           +G G +G V         + VAIK+I     Q   +  + EI  + R RH N++ ++   
Sbjct: 35  IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGINDII 94
Query: 397 R-----KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEE 451
           R     +  ++ +V D +                    + D     L  I + L Y+H  
Sbjct: 95  RAPTIEQMKDVYIVQDLMETD-------LYKLLKTQHLSNDHICYFLYQILRGLKYIH-- 145
Query: 452 CNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIY--EHGANPQTTHIVGTLGYLAPELTR 509
            +  V+HRD+KPSN+LL+T  + K+ DFGLA++   +H      T  V T  Y APE+  
Sbjct: 146 -SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 510 TGKA-TTSTDVYSYGILMLEVACGR 533
             K  T S D++S G ++ E+   R
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNR 229

>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor Length = 364

Iteration: 1
 Score = 68.9 bits (167), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 93/205 (45%), Gaps = 19/205 (9%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIG-HNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWC 396
           +G G +G V         + VAIK+I     Q   +  + EI  + R RH N++ ++   
Sbjct: 35  IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 397 R-----KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEE 451
           R     +  ++ +V D +                    + D     L  I + L Y+H  
Sbjct: 95  RAPTIEQMKDVYIVQDLMETD-------LYKLLKTQHLSNDHICYFLYQILRGLKYIH-- 145
Query: 452 CNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIY--EHGANPQTTHIVGTLGYLAPELTR 509
            +  V+HRD+KPSN+LL+T  + K+ DFGLA++   +H      T  V T  Y APE+  
Sbjct: 146 -SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 510 TGKA-TTSTDVYSYGILMLEVACGR 533
             K  T S D++S G ++ E+   R
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNR 229

>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain Of C-Met Length = 306

Iteration: 1
 Score = 68.9 bits (167), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 61/205 (29%), Positives = 103/205 (50%), Gaps = 23/205 (11%)
Query: 337 LVGSGGFGRVYRG-LMPSLG--LEVAIKRIGHNSQQG-MKEFVAEIMSMGRLRHRNLVQL 392
           ++G G FG VY G L+ + G  +  A+K +   +  G + +F+ E + M    H N++ L
Sbjct: 34  VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 93
Query: 393 HGWC-RKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIG----IAQSLLY 447
            G C R +   L+V  Y+ +G                 T +   K LIG    +A+ + Y
Sbjct: 94  LGICLRSEGSPLVVLPYMKHGDLRNFIRNE--------THNPTVKDLIGFGLQVAKGMKY 145
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IY--EHGANPQTTHIVGTLGYLA 504
           L    +++ VHRD+   N +LD     K+ DFGLA+ +Y  E+ +    T     + ++A
Sbjct: 146 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 202
Query: 505 PELTRTGKATTSTDVYSYGILMLEV 529
            E  +T K TT +DV+S+G+L+ E+
Sbjct: 203 LESLQTQKFTTKSDVWSFGVLLWEL 227

>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5 Length = 288

Iteration: 1
 Score = 68.9 bits (167), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 53/198 (26%), Positives = 96/198 (48%), Gaps = 13/198 (6%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIG-HNSQQGMKEF-VAEIMSMGRLRHRNLVQLHGW 395
           +G G +G VY+    + G   A+K+I      +G+    + EI  +  L+H N+V+L+  
Sbjct: 10  IGEGTYGVVYKA-QNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 396 CRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQR 455
              +  L+LV++++                            L+ +   + Y H   ++R
Sbjct: 69  IHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAK-----SFLLQLLNGIAYCH---DRR 120
Query: 456 VVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPE-LTRTGKAT 514
           V+HRD+KP N+L++     K+ DFGLA+ +      + TH + TL Y AP+ L  + K +
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLARAFGIPVR-KYTHEIVTLWYRAPDVLMGSKKYS 179
Query: 515 TSTDVYSYGILMLEVACG 532
           T+ D++S G +  E+  G
Sbjct: 180 TTIDIWSVGCIFAEMVNG 197

>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 68.9 bits (167), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 94/209 (44%), Gaps = 27/209 (12%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIG-HNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWC 396
           +G G +G V         + VAIK+I     Q   +  + EI  + R RH N++ ++   
Sbjct: 35  IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 397 R-----KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEE 451
           R     +  ++ +V D +                    + D     L  I + L Y+H  
Sbjct: 95  RAPTIEQMKDVYIVQDLMETD-------LYKLLKTQHLSNDHICYFLYQILRGLKYIH-- 145
Query: 452 CNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHI------VGTLGYLAP 505
            +  V+HRD+KPSN+LL+T  + K+ DFGLA++    A+P   H       V T  Y AP
Sbjct: 146 -SANVLHRDLKPSNLLLNTTCDLKICDFGLARV----ADPDHDHTGFLXEXVATRWYRAP 200
Query: 506 ELTRTGKA-TTSTDVYSYGILMLEVACGR 533
           E+    K  T S D++S G ++ E+   R
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 229

>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 68.9 bits (167), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 94/209 (44%), Gaps = 27/209 (12%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIG-HNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWC 396
           +G G +G V         + VAIK+I     Q   +  + EI  + R RH N++ ++   
Sbjct: 36  IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 397 R-----KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEE 451
           R     +  ++ +V D +                    + D     L  I + L Y+H  
Sbjct: 96  RAPTIEQMKDVYIVQDLMETD-------LYKLLKTQHLSNDHICYFLYQILRGLKYIH-- 146
Query: 452 CNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHI------VGTLGYLAP 505
            +  V+HRD+KPSN+LL+T  + K+ DFGLA++    A+P   H       V T  Y AP
Sbjct: 147 -SANVLHRDLKPSNLLLNTTCDLKICDFGLARV----ADPDHDHTGFLXEXVATRWYRAP 201
Query: 506 ELTRTGKA-TTSTDVYSYGILMLEVACGR 533
           E+    K  T S D++S G ++ E+   R
Sbjct: 202 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 230

>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The Dually-Phosphorylated, Activated State Length = 308

Iteration: 1
 Score = 68.9 bits (167), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 61/205 (29%), Positives = 103/205 (50%), Gaps = 23/205 (11%)
Query: 337 LVGSGGFGRVYRG-LMPSLG--LEVAIKRIGHNSQQG-MKEFVAEIMSMGRLRHRNLVQL 392
           ++G G FG VY G L+ + G  +  A+K +   +  G + +F+ E + M    H N++ L
Sbjct: 37  VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 393 HGWC-RKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIG----IAQSLLY 447
            G C R +   L+V  Y+ +G                 T +   K LIG    +A+ + Y
Sbjct: 97  LGICLRSEGSPLVVLPYMKHGDLRNFIRNE--------THNPTVKDLIGFGLQVAKGMKY 148
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IY--EHGANPQTTHIVGTLGYLA 504
           L    +++ VHRD+   N +LD     K+ DFGLA+ +Y  E+ +    T     + ++A
Sbjct: 149 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 205
Query: 505 PELTRTGKATTSTDVYSYGILMLEV 529
            E  +T K TT +DV+S+G+L+ E+
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWEL 230

>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328

Iteration: 1
 Score = 68.9 bits (167), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 65/247 (26%), Positives = 103/247 (41%), Gaps = 20/247 (8%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLRHRNLVQLHGW 395
           +G G F +V        G EVAIK I     +   +++   E+  M  L H N+V+L   
Sbjct: 20  IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 79
Query: 396 CRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQR 455
              +  L L+ +Y   G                     R      I  ++ Y H+   +R
Sbjct: 80  IETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQ-----IVSAVQYCHQ---KR 131
Query: 456 VVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKAT- 514
           +VHRD+K  N+LLD  +N K+ DFG +  +  G    T    G+  Y APEL +  K   
Sbjct: 132 IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDT--FCGSPPYAAPELFQGKKYDG 189
Query: 515 TSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYYDLA 574
              DV+S G+++  +  G    + Q        +  ++E  L G+       + D  +L 
Sbjct: 190 PEVDVWSLGVILYTLVSGSLPFDGQN-------LKELRERVLRGKYRIPFYMSTDCENLL 242
Query: 575 EAELVLN 581
           +  LVLN
Sbjct: 243 KRFLVLN 249

>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor Length = 319

Iteration: 1
 Score = 68.9 bits (167), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 61/205 (29%), Positives = 103/205 (50%), Gaps = 23/205 (11%)
Query: 337 LVGSGGFGRVYRG-LMPSLG--LEVAIKRIGHNSQQG-MKEFVAEIMSMGRLRHRNLVQL 392
           ++G G FG VY G L+ + G  +  A+K +   +  G + +F+ E + M    H N++ L
Sbjct: 56  VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 115
Query: 393 HGWC-RKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIG----IAQSLLY 447
            G C R +   L+V  Y+ +G                 T +   K LIG    +A+ + Y
Sbjct: 116 LGICLRSEGSPLVVLPYMKHGDLRNFIRNE--------THNPTVKDLIGFGLQVAKGMKY 167
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IY--EHGANPQTTHIVGTLGYLA 504
           L    +++ VHRD+   N +LD     K+ DFGLA+ +Y  E+ +    T     + ++A
Sbjct: 168 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 224
Query: 505 PELTRTGKATTSTDVYSYGILMLEV 529
            E  +T K TT +DV+S+G+L+ E+
Sbjct: 225 LESLQTQKFTTKSDVWSFGVLLWEL 249

>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880 (Gsk1 Length = 302

Iteration: 1
 Score = 68.9 bits (167), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 61/205 (29%), Positives = 103/205 (50%), Gaps = 23/205 (11%)
Query: 337 LVGSGGFGRVYRG-LMPSLG--LEVAIKRIGHNSQQG-MKEFVAEIMSMGRLRHRNLVQL 392
           ++G G FG VY G L+ + G  +  A+K +   +  G + +F+ E + M    H N++ L
Sbjct: 35  VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 393 HGWC-RKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIG----IAQSLLY 447
            G C R +   L+V  Y+ +G                 T +   K LIG    +A+ + Y
Sbjct: 95  LGICLRSEGSPLVVLPYMKHGDLRNFIRNE--------THNPTVKDLIGFGLQVAKGMKY 146
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IY--EHGANPQTTHIVGTLGYLA 504
           L    +++ VHRD+   N +LD     K+ DFGLA+ +Y  E+ +    T     + ++A
Sbjct: 147 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 203
Query: 505 PELTRTGKATTSTDVYSYGILMLEV 529
            E  +T K TT +DV+S+G+L+ E+
Sbjct: 204 LESLQTQKFTTKSDVWSFGVLLWEL 228

>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based Allosteric Inhibitor Xl518 (Gdc-0973), Or Related Analogs. Length = 301

Iteration: 1
 Score = 68.9 bits (167), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 89/167 (53%), Gaps = 21/167 (12%)
Query: 436 KILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLA-KIYEHGANPQTT 494
           K+ I + + L YL E+   +++HRDVKPSNIL+++    KL DFG++ ++ +  AN    
Sbjct: 111 KVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMAN---- 164
Query: 495 HIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKEL 554
             VGT  Y++PE  +    +  +D++S G+ ++E+A GR    P+   A   L+D++   
Sbjct: 165 EFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRY---PRPPMAIFELLDYIVN- 220
Query: 555 HLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVV 601
               ++  A+  +L++ D             C   NP  R D+++++
Sbjct: 221 EPPPKLPSAV-FSLEFQDFVNK---------CLIKNPAERADLKQLM 257

>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine Inhibitor 13 Length = 309

Iteration: 1
 Score = 68.6 bits (166), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 61/205 (29%), Positives = 103/205 (50%), Gaps = 23/205 (11%)
Query: 337 LVGSGGFGRVYRG-LMPSLG--LEVAIKRIGHNSQQG-MKEFVAEIMSMGRLRHRNLVQL 392
           ++G G FG VY G L+ + G  +  A+K +   +  G + +F+ E + M    H N++ L
Sbjct: 36  VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 393 HGWC-RKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIG----IAQSLLY 447
            G C R +   L+V  Y+ +G                 T +   K LIG    +A+ + Y
Sbjct: 96  LGICLRSEGSPLVVLPYMKHGDLRNFIRNE--------THNPTVKDLIGFGLQVAKGMKY 147
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IY--EHGANPQTTHIVGTLGYLA 504
           L    +++ VHRD+   N +LD     K+ DFGLA+ +Y  E+ +    T     + ++A
Sbjct: 148 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 204
Query: 505 PELTRTGKATTSTDVYSYGILMLEV 529
            E  +T K TT +DV+S+G+L+ E+
Sbjct: 205 LESLQTQKFTTKSDVWSFGVLLWEL 229

>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor Length = 298

Iteration: 1
 Score = 68.6 bits (166), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 61/205 (29%), Positives = 103/205 (50%), Gaps = 23/205 (11%)
Query: 337 LVGSGGFGRVYRG-LMPSLG--LEVAIKRIGHNSQQG-MKEFVAEIMSMGRLRHRNLVQL 392
           ++G G FG VY G L+ + G  +  A+K +   +  G + +F+ E + M    H N++ L
Sbjct: 32  VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 91
Query: 393 HGWC-RKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIG----IAQSLLY 447
            G C R +   L+V  Y+ +G                 T +   K LIG    +A+ + Y
Sbjct: 92  LGICLRSEGSPLVVLPYMKHGDLRNFIRNE--------THNPTVKDLIGFGLQVAKGMKY 143
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IY--EHGANPQTTHIVGTLGYLA 504
           L    +++ VHRD+   N +LD     K+ DFGLA+ +Y  E+ +    T     + ++A
Sbjct: 144 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 200
Query: 505 PELTRTGKATTSTDVYSYGILMLEV 529
            E  +T K TT +DV+S+G+L+ E+
Sbjct: 201 LESLQTQKFTTKSDVWSFGVLLWEL 225

>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-Thiadiazole- Thiophene Inhibitor Length = 302

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/211 (29%), Positives = 95/211 (45%), Gaps = 38/211 (18%)
Query: 338 VGSGGFGRV----YRGLMPSLGLEVAIKRI----GHNSQQGMKEFVAEIMSMGRLRHRNL 389
           +G G FG+V    Y       G  VA+K +    G   + G K+   EI  +  L H ++
Sbjct: 22  LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQ---EIDILRTLYHEHI 78
Query: 390 VQLHGWCRKQDE--LLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
           ++  G C  Q E  L LV +YVP GS                  D   +  IG+AQ LL+
Sbjct: 79  IKYKGCCEDQGEKSLQLVMEYVPLGSLR----------------DYLPRHSIGLAQLLLF 122
Query: 448 LHEEC-------NQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVG-- 498
             + C       +Q  +HR++   N+LLD     K+GDFGLAK    G         G  
Sbjct: 123 AQQICEGMAYLHSQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDS 182
Query: 499 TLGYLAPELTRTGKATTSTDVYSYGILMLEV 529
            + + APE  +  K   ++DV+S+G+ + E+
Sbjct: 183 PVFWYAPECLKEYKFYYASDVWSFGVTLYEL 213

>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In Complex With An Mk-2461 Analog With Specificity For The Activated Receptor Length = 307

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 59/205 (28%), Positives = 99/205 (48%), Gaps = 23/205 (11%)
Query: 337 LVGSGGFGRVYRG-LMPSLG--LEVAIKRIGHNSQQG-MKEFVAEIMSMGRLRHRNLVQL 392
           ++G G FG VY G L+ + G  +  A+K +   +  G + +F+ E + M    H N++ L
Sbjct: 36  VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 393 HGWC-RKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIG----IAQSLLY 447
            G C R +   L+V  Y+ +G                 T +   K LIG    +A+ + Y
Sbjct: 96  LGICLRSEGSPLVVLPYMKHGDLRNFIRNE--------THNPTVKDLIGFGLQVAKGMKY 147
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGT---LGYLA 504
           L    +++ VHRD+   N +LD     K+ DFGLA+           +  G    + ++A
Sbjct: 148 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMA 204
Query: 505 PELTRTGKATTSTDVYSYGILMLEV 529
            E  +T K TT +DV+S+G+L+ E+
Sbjct: 205 LESLQTQKFTTKSDVWSFGVLLWEL 229

>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase Length = 318

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 61/205 (29%), Positives = 103/205 (50%), Gaps = 23/205 (11%)
Query: 337 LVGSGGFGRVYRG-LMPSLG--LEVAIKRIGHNSQQG-MKEFVAEIMSMGRLRHRNLVQL 392
           ++G G FG VY G L+ + G  +  A+K +   +  G + +F+ E + M    H N++ L
Sbjct: 55  VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 114
Query: 393 HGWC-RKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIG----IAQSLLY 447
            G C R +   L+V  Y+ +G                 T +   K LIG    +A+ + Y
Sbjct: 115 LGICLRSEGSPLVVLPYMKHGDLRNFIRNE--------THNPTVKDLIGFGLQVAKGMKY 166
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IY--EHGANPQTTHIVGTLGYLA 504
           L    +++ VHRD+   N +LD     K+ DFGLA+ +Y  E+ +    T     + ++A
Sbjct: 167 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 223
Query: 505 PELTRTGKATTSTDVYSYGILMLEV 529
            E  +T K TT +DV+S+G+L+ E+
Sbjct: 224 LESLQTQKFTTKSDVWSFGVLLWEL 248

>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor. Length = 310

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 61/205 (29%), Positives = 103/205 (50%), Gaps = 23/205 (11%)
Query: 337 LVGSGGFGRVYRG-LMPSLG--LEVAIKRIGHNSQQG-MKEFVAEIMSMGRLRHRNLVQL 392
           ++G G FG VY G L+ + G  +  A+K +   +  G + +F+ E + M    H N++ L
Sbjct: 37  VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 393 HGWC-RKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIG----IAQSLLY 447
            G C R +   L+V  Y+ +G                 T +   K LIG    +A+ + Y
Sbjct: 97  LGICLRSEGSPLVVLPYMKHGDLRNFIRNE--------THNPTVKDLIGFGLQVAKGMKY 148
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IY--EHGANPQTTHIVGTLGYLA 504
           L    +++ VHRD+   N +LD     K+ DFGLA+ +Y  E+ +    T     + ++A
Sbjct: 149 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 205
Query: 505 PELTRTGKATTSTDVYSYGILMLEV 529
            E  +T K TT +DV+S+G+L+ E+
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWEL 230

>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase Erk1 Length = 382

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 92/211 (43%), Gaps = 19/211 (9%)
Query: 332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQG-MKEFVAEIMSMGRLRHRNLV 390
           + +   +G G +G V           VAIK+I     Q   +  + EI  + R RH N++
Sbjct: 45  YTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVI 104
Query: 391 QLHGWCRKQD-----ELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSL 445
            +    R        ++ +V D +                    + D     L  I + L
Sbjct: 105 GIRDILRASTLEAMRDVYIVQDLMETD-------LYKLLKSQQLSNDHICYFLYQILRGL 157
Query: 446 LYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIY--EHGANPQTTHIVGTLGYL 503
            Y+H   +  V+HRD+KPSN+L++T  + K+ DFGLA+I   EH      T  V T  Y 
Sbjct: 158 KYIH---SANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYR 214
Query: 504 APELTRTGKA-TTSTDVYSYGILMLEVACGR 533
           APE+    K  T S D++S G ++ E+   R
Sbjct: 215 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245

>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex Length = 349

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/211 (29%), Positives = 97/211 (45%), Gaps = 19/211 (9%)
Query: 331 GFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLV 390
            + +  ++G+G FG VY+  +   G  VAIK++  + +   +E    +  M +L H N+V
Sbjct: 21  SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIV 76
Query: 391 QLHGWCRKQDE------LLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQS 444
           +L  +     E      L LV DYVP                    + + Y  +  + +S
Sbjct: 77  RLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFRS 134
Query: 445 LLYLHEECNQRVVHRDVKPSNILLDTYLNA-KLGDFGLAKIYEHGANPQTTHIVGTLGYL 503
           L Y+H   +  + HRD+KP N+LLD      KL DFG AK    G  P  + I     Y 
Sbjct: 135 LAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSXICSRY-YR 189
Query: 504 APELTR-TGKATTSTDVYSYGILMLEVACGR 533
           APEL       T+S DV+S G ++ E+  G+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 220

>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 47/198 (23%), Positives = 95/198 (47%), Gaps = 11/198 (5%)
Query: 335 QNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHG 394
           ++ +G G +G VY G+     L VA+K +  ++ + ++EF+ E   M  ++H NLVQL G
Sbjct: 264 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLG 322
Query: 395 WCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQ 454
            C ++    ++ +++  G+                       +   I+ ++ YL +   +
Sbjct: 323 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV---LLYMATQISSAMEYLEK---K 376
Query: 455 RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGT--LGYLAPELTRTGK 512
             +HR++   N L+      K+ DFGL+++     +  T H      + + APE     K
Sbjct: 377 NFIHRNLAARNCLVGENHLVKVADFGLSRLMT--GDTYTAHAGAKFPIKWTAPESLAYNK 434
Query: 513 ATTSTDVYSYGILMLEVA 530
            +  +DV+++G+L+ E+A
Sbjct: 435 FSIKSDVWAFGVLLWEIA 452

>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor Length = 292

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 61/205 (29%), Positives = 103/205 (50%), Gaps = 23/205 (11%)
Query: 337 LVGSGGFGRVYRG-LMPSLG--LEVAIKRIGHNSQQG-MKEFVAEIMSMGRLRHRNLVQL 392
           ++G G FG VY G L+ + G  +  A+K +   +  G + +F+ E + M    H N++ L
Sbjct: 29  VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 88
Query: 393 HGWC-RKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIG----IAQSLLY 447
            G C R +   L+V  Y+ +G                 T +   K LIG    +A+ + Y
Sbjct: 89  LGICLRSEGSPLVVLPYMKHGDLRNFIRNE--------THNPTVKDLIGFGLQVAKGMKY 140
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IY--EHGANPQTTHIVGTLGYLA 504
           L    +++ VHRD+   N +LD     K+ DFGLA+ +Y  E+ +    T     + ++A
Sbjct: 141 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 197
Query: 505 PELTRTGKATTSTDVYSYGILMLEV 529
            E  +T K TT +DV+S+G+L+ E+
Sbjct: 198 LESLQTQKFTTKSDVWSFGVLLWEL 222

>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 69/275 (25%), Positives = 118/275 (42%), Gaps = 32/275 (11%)
Query: 332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIG-HNSQQGMKEFVAEIMSMGRLRHRNLV 390
           F +   +G G FG V++G+       VAIK I    ++  +++   EI  + +     + 
Sbjct: 9   FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 391 QLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHE 450
           + +G   K  +L ++ +Y+  GS                T      IL  I + L YLH 
Sbjct: 69  KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIAT------ILREILKGLDYLHS 122
Query: 451 ECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRT 510
           E   + +HRD+K +N+LL  +   KL DFG+A         + T  VGT  ++APE+ + 
Sbjct: 123 E---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT-FVGTPFWMAPEVIKQ 178
Query: 511 GKATTSTDVYSYGILMLEVACGR---RSIEPQKAAAELLLVDWVKELHLEGEITQAIDQT 567
               +  D++S GI  +E+A G      + P K    L L+       LEG  ++ + + 
Sbjct: 179 SAYDSKADIWSLGITAIELARGEPPHSELHPMKV---LFLIPKNNPPTLEGNYSKPLKE- 234
Query: 568 LDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVE 602
                  EA         C    P +RP  + +++
Sbjct: 235 -----FVEA---------CLNKEPSFRPTAKELLK 255

>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 302

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/211 (29%), Positives = 94/211 (44%), Gaps = 38/211 (18%)
Query: 338 VGSGGFGRV----YRGLMPSLGLEVAIKRI----GHNSQQGMKEFVAEIMSMGRLRHRNL 389
           +G G FG+V    Y       G  VA+K +    G   + G K+   EI  +  L H ++
Sbjct: 22  LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQ---EIDILRTLYHEHI 78
Query: 390 VQLHGWCRKQDE--LLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
           ++  G C  Q E  L LV +YVP GS                  D   +  IG+AQ LL+
Sbjct: 79  IKYKGCCEDQGEKSLQLVMEYVPLGSLR----------------DYLPRHSIGLAQLLLF 122
Query: 448 LHEECN-------QRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVG-- 498
             + C        Q  +HR++   N+LLD     K+GDFGLAK    G         G  
Sbjct: 123 AQQICEGMAYLHAQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDS 182
Query: 499 TLGYLAPELTRTGKATTSTDVYSYGILMLEV 529
            + + APE  +  K   ++DV+S+G+ + E+
Sbjct: 183 PVFWYAPECLKEYKFYYASDVWSFGVTLYEL 213

>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 68/272 (25%), Positives = 115/272 (42%), Gaps = 26/272 (9%)
Query: 332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIG-HNSQQGMKEFVAEIMSMGRLRHRNLV 390
           F + + +G G FG VY+G+       VAIK I    ++  +++   EI  + +     + 
Sbjct: 21  FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 80
Query: 391 QLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHE 450
           +  G   K  +L ++ +Y+  GS                T      IL  I + L YLH 
Sbjct: 81  RYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYIAT------ILREILKGLDYLHS 134
Query: 451 ECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRT 510
           E   R +HRD+K +N+LL    + KL DFG+A         +    VGT  ++APE+ + 
Sbjct: 135 E---RKIHRDIKAANVLLSEQGDVKLADFGVAGQLT-DTQIKRNXFVGTPFWMAPEVIKQ 190
Query: 511 GKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDY 570
                  D++S GI  +E+A G            L L+       LEG+ ++       +
Sbjct: 191 SAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSPPTLEGQHSKP------F 244
Query: 571 YDLAEAELVLNLGLFCSAPNPVYRPDMRRVVE 602
            +  EA         C   +P +RP  + +++
Sbjct: 245 KEFVEA---------CLNKDPRFRPTAKELLK 267

>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680 Length = 292

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 54/205 (26%), Positives = 94/205 (45%), Gaps = 18/205 (8%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMK-EFVAEIMSMGRLRHRNLVQLHG 394
           +G G FG VY          VA+K +  +   ++G++ +   EI     L H N+++L+ 
Sbjct: 31  LGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYN 90
Query: 395 WCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYK--ILIGIAQSLLYLHEEC 452
           +   +  + L+ +Y P G                 T+D++    I+  +A +L+Y H   
Sbjct: 91  YFYDRRRIYLILEYAPRGELYKELQKSC-------TFDEQRTATIMEELADALMYCH--- 140
Query: 453 NQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGK 512
            ++V+HRD+KP N+LL      K+ DFG +    H  + +   + GTL YL PE+     
Sbjct: 141 GKKVIHRDIKPENLLLGLKGELKIADFGWSV---HAPSLRRKTMCGTLDYLPPEMIEGRM 197
Query: 513 ATTSTDVYSYGILMLEVACGRRSIE 537
                D++  G+L  E+  G    E
Sbjct: 198 HNEKVDLWCIGVLCYELLVGNPPFE 222

>pdb|3KK8|A Chain A, Camkii Substrate Complex A Length = 284

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 88/194 (45%), Gaps = 15/194 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLRHRNLVQLHGW 395
           +G G F  V R +  + GLE A K I     S +  ++   E     +L+H N+V+LH  
Sbjct: 14  LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 73
Query: 396 CRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQR 455
            +++    LV+D V  G                 +       +  I +S+ Y H   +  
Sbjct: 74  IQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS-----HCIQQILESIAYCH---SNG 125
Query: 456 VVHRDVKPSNILLDTYLNA---KLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGK 512
           +VHR++KP N+LL +       KL DFGLA   E   +       GT GYL+PE+ +   
Sbjct: 126 IVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLSPEVLKKDP 183
Query: 513 ATTSTDVYSYGILM 526
            +   D+++ G+++
Sbjct: 184 YSKPVDIWACGVIL 197

>pdb|3KK9|A Chain A, Camkii Substrate Complex B Length = 282

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 88/194 (45%), Gaps = 15/194 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLRHRNLVQLHGW 395
           +G G F  V R +  + GLE A K I     S +  ++   E     +L+H N+V+LH  
Sbjct: 13  LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 72
Query: 396 CRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQR 455
            +++    LV+D V  G                 +       +  I +S+ Y H   +  
Sbjct: 73  IQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS-----HCIQQILESIAYCH---SNG 124
Query: 456 VVHRDVKPSNILLDTYLNA---KLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGK 512
           +VHR++KP N+LL +       KL DFGLA   E   +       GT GYL+PE+ +   
Sbjct: 125 IVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLSPEVLKKDP 182
Query: 513 ATTSTDVYSYGILM 526
            +   D+++ G+++
Sbjct: 183 YSKPVDIWACGVIL 196

>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex Length = 269

Iteration: 1
 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 88/194 (45%), Gaps = 15/194 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLRHRNLVQLHGW 395
           +G G F  V R +  + GLE A K I     S +  ++   E     +L+H N+V+LH  
Sbjct: 14  LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 73
Query: 396 CRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQR 455
            +++    LV+D V  G                 +       +  I +S+ Y H   +  
Sbjct: 74  IQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS-----HCIQQILESIAYCH---SNG 125
Query: 456 VVHRDVKPSNILLDTYLNA---KLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGK 512
           +VHR++KP N+LL +       KL DFGLA   E   +       GT GYL+PE+ +   
Sbjct: 126 IVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLSPEVLKKDP 183
Query: 513 ATTSTDVYSYGILM 526
            +   D+++ G+++
Sbjct: 184 YSKPVDIWACGVIL 197

>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine Mutation At Position 52 Length = 364

Iteration: 1
 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/205 (27%), Positives = 93/205 (45%), Gaps = 19/205 (9%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIG-HNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWC 396
           +G G +G V         + VAI++I     Q   +  + EI  + R RH N++ ++   
Sbjct: 35  IGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 397 R-----KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEE 451
           R     +  ++ +V D +                    + D     L  I + L Y+H  
Sbjct: 95  RAPTIEQMKDVYIVQDLMETD-------LYKLLKTQHLSNDHICYFLYQILRGLKYIH-- 145
Query: 452 CNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIY--EHGANPQTTHIVGTLGYLAPELTR 509
            +  V+HRD+KPSN+LL+T  + K+ DFGLA++   +H      T  V T  Y APE+  
Sbjct: 146 -SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 510 TGKA-TTSTDVYSYGILMLEVACGR 533
             K  T S D++S G ++ E+   R
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNR 229

>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin. Length = 284

Iteration: 1
 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 90/199 (45%), Gaps = 16/199 (8%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMK-EFVAEIMSMGRLRHRNLVQLHG 394
           +G G FG VY          +A+K +  +   ++G++ +   EI     LRH N+++++ 
Sbjct: 22  LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 395 WCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIG-IAQSLLYLHEECN 453
           +   +  + L+ ++ P G                   +QR    +  +A +L Y HE   
Sbjct: 82  YFHDRKRIYLMLEFAPRGELYKELQKHGRFD------EQRSATFMEELADALHYCHE--- 132
Query: 454 QRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKA 513
           ++V+HRD+KP N+L+      K+ DFG +    H  + +   + GTL YL PE+      
Sbjct: 133 RKVIHRDIKPENLLMGYKGELKIADFGWSV---HAPSLRRRXMCGTLDYLPPEMIEGKTH 189
Query: 514 TTSTDVYSYGILMLEVACG 532
               D++  G+L  E   G
Sbjct: 190 DEKVDLWCAGVLCYEFLVG 208

>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum, Cgd2_1960 Length = 388

Iteration: 1
 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/223 (28%), Positives = 101/223 (45%), Gaps = 38/223 (17%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIG---HNSQQGMKEFVAEIMSMGRLR-HRNLVQLH 393
           +G G +G V++ +    G  VA+K+I     NS    + F  EIM +  L  H N+V L 
Sbjct: 17  LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTF-REIMILTELSGHENIVNLL 75
Query: 394 GWCRKQDE--LLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEE 451
              R  ++  + LV+DY+                        +  ++  + + + YLH  
Sbjct: 76  NVLRADNDRDVYLVFDYMETDLHAVIRANILEPV-------HKQYVVYQLIKVIKYLH-- 126
Query: 452 CNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK---------------IYEHGAN-----P 491
            +  ++HRD+KPSNILL+   + K+ DFGL++               I E+  N     P
Sbjct: 127 -SGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQP 185
Query: 492 QTTHIVGTLGYLAPE-LTRTGKATTSTDVYSYGILMLEVACGR 533
             T  V T  Y APE L  + K T   D++S G ++ E+ CG+
Sbjct: 186 ILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228

>pdb|1DBN|A Chain A, Maackia Amurensis Leukoagglutinin (Lectin) With Sialyllactose Length = 239

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 68/255 (26%), Positives = 114/255 (44%), Gaps = 33/255 (12%)
Query: 6   ADTTSFLYNGFL--HANLSLEGAAYISTSGILTVTNKSEGL-----IGHALYPNPLRFKT 58
           +D  SF  N F+   A+L  +G A +S++G+L +T    G      +G ALY  P+R   
Sbjct: 1   SDELSFTINNFVPNEADLLFQGEASVSSTGVLQLTKVENGQPQKYSVGRALYAAPVRIWG 60
Query: 59  SNKSVAIDFRTNFVFSILPKYPDLGGQGLAFIIISTNR--PENCLANQFLGLPNITMSSS 116
           +       F T+F F +    PD+   GLAF +   +   P   ++ ++LGL     +S+
Sbjct: 61  NTTGSVASFSTSFTFVVKAPNPDITSDGLAFYLAPPDSQIPSGSVS-KYLGL---FNNSN 116
Query: 117 TKFSTRMLAVEFD--IIQNTELIDINDNHVGIDXXXXXXXXXXXXXYYSGNNHRIPI-LL 173
           +  S +++AVEFD     + +  D N  H+GID             + +G      I  L
Sbjct: 117 SDSSNQIVAVEFDTYFAHSYDPWDPNYRHIGIDVNGIESIKTVQWDWINGGVAFATITYL 176
Query: 174 RSGDPIQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGL 233
                + A + Y S +   +V+                 +DL  ++ E++  GFSA+TG 
Sbjct: 177 APNKTLIASLVYPSNQTTFSVAAS---------------VDLKEILPEWVRVGFSAATGY 221
Query: 234 IT--ASHNVHGWSIS 246
            T   +H+V  WS +
Sbjct: 222 PTEVETHDVLSWSFT 236

>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439 Length = 285

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 90/199 (45%), Gaps = 16/199 (8%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMK-EFVAEIMSMGRLRHRNLVQLHG 394
           +G G FG VY          +A+K +  +   ++G++ +   EI     LRH N+++++ 
Sbjct: 23  LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 82
Query: 395 WCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIG-IAQSLLYLHEECN 453
           +   +  + L+ ++ P G                   +QR    +  +A +L Y HE   
Sbjct: 83  YFHDRKRIYLMLEFAPRGELYKELQKHGRFD------EQRSATFMEELADALHYCHE--- 133
Query: 454 QRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKA 513
           ++V+HRD+KP N+L+      K+ DFG +    H  + +   + GTL YL PE+      
Sbjct: 134 RKVIHRDIKPENLLMGYKGELKIADFGWSV---HAPSLRRRXMCGTLDYLPPEMIEGKTH 190
Query: 514 TTSTDVYSYGILMLEVACG 532
               D++  G+L  E   G
Sbjct: 191 DEKVDLWCAGVLCYEFLVG 209

>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26) Length = 573

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/190 (26%), Positives = 85/190 (44%), Gaps = 11/190 (5%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +G+G FG V+R    + G   A K +    +   +    EI +M  LRH  LV LH    
Sbjct: 165 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 224
Query: 398 KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQRVV 457
             +E++++Y+++  G                   D+  + +  + + L ++HE      V
Sbjct: 225 DDNEMVMIYEFMSGGELFEKVADEHNKMSE----DEAVEYMRQVCKGLCHMHE---NNYV 277
Query: 458 HRDVKPSNILLDTYLNA--KLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATT 515
           H D+KP NI+  T  +   KL DFGL    +   + + T   GT  + APE+        
Sbjct: 278 HLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVT--TGTAEFAAPEVAEGKPVGY 335
Query: 516 STDVYSYGIL 525
            TD++S G+L
Sbjct: 336 YTDMWSVGVL 345

>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/231 (26%), Positives = 105/231 (45%), Gaps = 31/231 (13%)
Query: 309 EDWEIQCGARRFKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIK--RIGHN 366
           +DWEI  G           +T G      +GSG FG VY+G       +VA+K   +   
Sbjct: 17  DDWEIPDG----------QITVG----QRIGSGSFGTVYKGKWHG---DVAVKMLNVTAP 59
Query: 367 SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXX 426
           + Q ++ F  E+  + + RH N++   G+     +L +V  +    S             
Sbjct: 60  TPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQWCEGSSLYHHLHASETKFE 118
Query: 427 XXXTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLA-KIY 485
                D    I    A+ + YLH +    ++HRD+K +NI L      K+GDFGLA +  
Sbjct: 119 MKKLID----IARQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKS 171
Query: 486 EHGANPQTTHIVGTLGYLAPELTRTGKA---TTSTDVYSYGILMLEVACGR 533
               + Q   + G++ ++APE+ R   +   +  +DVY++GI++ E+  G+
Sbjct: 172 RWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 222

>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated Protein Kinase And Immunoglobulin Domains Length = 491

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/190 (26%), Positives = 85/190 (44%), Gaps = 11/190 (5%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +G+G FG V+R    + G   A K +    +   +    EI +M  LRH  LV LH    
Sbjct: 59  LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 118
Query: 398 KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQRVV 457
             +E++++Y+++  G                   D+  + +  + + L ++HE      V
Sbjct: 119 DDNEMVMIYEFMSGGELFEKVADEHNKMSE----DEAVEYMRQVCKGLCHMHE---NNYV 171
Query: 458 HRDVKPSNILLDTYLNA--KLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATT 515
           H D+KP NI+  T  +   KL DFGL    +   + + T   GT  + APE+        
Sbjct: 172 HLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVT--TGTAEFAAPEVAEGKPVGY 229
Query: 516 STDVYSYGIL 525
            TD++S G+L
Sbjct: 230 YTDMWSVGVL 239

>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With Ucb1353770 And Amppnp Length = 304

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/177 (29%), Positives = 87/177 (49%), Gaps = 37/177 (20%)
Query: 436 KILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLA-KIYEHGANPQTT 494
           K+ I + + L YL E+   +++HRDVKPSNIL+++    KL DFG++ ++ +  AN    
Sbjct: 127 KVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN---- 180
Query: 495 HIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKEL 554
             VGT  Y++PE  +    +  +D++S G+ ++E+A GR  I                  
Sbjct: 181 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIG----------------- 223
Query: 555 HLEGEITQAIDQTLDYYDLAEAELVLNLGLF----------CSAPNPVYRPDMRRVV 601
              G  + AI + LDY  + E    L  G+F          C   NP  R D+++++
Sbjct: 224 --SGSGSMAIFELLDYI-VNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLM 277

>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia Length = 329

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 94/205 (45%), Gaps = 28/205 (13%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRI--GHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGW 395
           +G G +G VY+ +       VAIKRI   H  +      + E+  +  L+HRN+++L   
Sbjct: 42  LGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSV 101
Query: 396 CRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY-----LHE 450
                 L L+++Y  N                    D+   + + + +S LY     ++ 
Sbjct: 102 IHHNHRLHLIFEYAENDLKKYM--------------DKNPDVSMRVIKSFLYQLINGVNF 147
Query: 451 ECNQRVVHRDVKPSNILLDTYLNA-----KLGDFGLAKIYEHGANPQTTHIVGTLGYLAP 505
             ++R +HRD+KP N+LL     +     K+GDFGLA+ +      Q TH + TL Y  P
Sbjct: 148 CHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIR-QFTHEIITLWYRPP 206
Query: 506 E-LTRTGKATTSTDVYSYGILMLEV 529
           E L  +   +TS D++S   +  E+
Sbjct: 207 EILLGSRHYSTSVDIWSIACIWAEM 231

>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Pyrrolotriazine Based Inhibitor Length = 373

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 60/205 (29%), Positives = 102/205 (49%), Gaps = 23/205 (11%)
Query: 337 LVGSGGFGRVYRG-LMPSLG--LEVAIKRIGHNSQQG-MKEFVAEIMSMGRLRHRNLVQL 392
           ++G G FG VY G L+ + G  +  A+K +   +  G + +F+ E + M    H N++ L
Sbjct: 96  VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 155
Query: 393 HGWC-RKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIG----IAQSLLY 447
            G C R +   L+V  Y+ +G                 T +   K LIG    +A+ + +
Sbjct: 156 LGICLRSEGSPLVVLPYMKHGDLRNFIRNE--------THNPTVKDLIGFGLQVAKGMKF 207
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IY--EHGANPQTTHIVGTLGYLA 504
           L    +++ VHRD+   N +LD     K+ DFGLA+ +Y  E  +    T     + ++A
Sbjct: 208 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 264
Query: 505 PELTRTGKATTSTDVYSYGILMLEV 529
            E  +T K TT +DV+S+G+L+ E+
Sbjct: 265 LESLQTQKFTTKSDVWSFGVLLWEL 289

>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of CalciumCALMODULIN ACTIVATED KINASE II Length = 362

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 88/194 (45%), Gaps = 15/194 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLRHRNLVQLHGW 395
           +G G F  V R +  + GLE A K I     S +  ++   E     +L+H N+V+LH  
Sbjct: 37  LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 96
Query: 396 CRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQR 455
            +++    LV+D V  G                 +       +  I +S+ Y H   +  
Sbjct: 97  IQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS-----HCIQQILESIAYCH---SNG 148
Query: 456 VVHRDVKPSNILLDTYLNA---KLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGK 512
           +VHR++KP N+LL +       KL DFGLA   E   +       GT GYL+PE+ +   
Sbjct: 149 IVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLSPEVLKKDP 206
Query: 513 ATTSTDVYSYGILM 526
            +   D+++ G+++
Sbjct: 207 YSKPVDIWACGVIL 220

>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1 Length = 317

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 60/205 (29%), Positives = 102/205 (49%), Gaps = 23/205 (11%)
Query: 337 LVGSGGFGRVYRG-LMPSLG--LEVAIKRIGHNSQQG-MKEFVAEIMSMGRLRHRNLVQL 392
           ++G G FG VY G L+ + G  +  A+K +   +  G + +F+ E + M    H N++ L
Sbjct: 38  VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 393 HGWC-RKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIG----IAQSLLY 447
            G C R +   L+V  Y+ +G                 T +   K LIG    +A+ + +
Sbjct: 98  LGICLRSEGSPLVVLPYMKHGDLRNFIRNE--------THNPTVKDLIGFGLQVAKGMKF 149
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IY--EHGANPQTTHIVGTLGYLA 504
           L    +++ VHRD+   N +LD     K+ DFGLA+ +Y  E  +    T     + ++A
Sbjct: 150 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 206
Query: 505 PELTRTGKATTSTDVYSYGILMLEV 529
            E  +T K TT +DV+S+G+L+ E+
Sbjct: 207 LESLQTQKFTTKSDVWSFGVLLWEL 231

>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 68/275 (24%), Positives = 117/275 (42%), Gaps = 32/275 (11%)
Query: 332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIG-HNSQQGMKEFVAEIMSMGRLRHRNLV 390
           F +   +G G FG V++G+       VAIK I    ++  +++   EI  + +     + 
Sbjct: 9   FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 391 QLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHE 450
           + +G   K  +L ++ +Y+  GS                T      IL  I + L YLH 
Sbjct: 69  KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIAT------ILREILKGLDYLHS 122
Query: 451 ECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRT 510
           E   + +HRD+K +N+LL  +   KL DFG+A         +    VGT  ++APE+ + 
Sbjct: 123 E---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLT-DTQIKRNXFVGTPFWMAPEVIKQ 178
Query: 511 GKATTSTDVYSYGILMLEVACGR---RSIEPQKAAAELLLVDWVKELHLEGEITQAIDQT 567
               +  D++S GI  +E+A G      + P K    L L+       LEG  ++ + + 
Sbjct: 179 SAYDSKADIWSLGITAIELARGEPPHSELHPMKV---LFLIPKNNPPTLEGNYSKPLKE- 234
Query: 568 LDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVE 602
                  EA         C    P +RP  + +++
Sbjct: 235 -----FVEA---------CLNKEPSFRPTAKELLK 255

>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With The Microbial Alkaloid K-252a Length = 312

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 60/205 (29%), Positives = 102/205 (49%), Gaps = 23/205 (11%)
Query: 337 LVGSGGFGRVYRG-LMPSLG--LEVAIKRIGHNSQQG-MKEFVAEIMSMGRLRHRNLVQL 392
           ++G G FG VY G L+ + G  +  A+K +   +  G + +F+ E + M    H N++ L
Sbjct: 35  VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 393 HGWC-RKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIG----IAQSLLY 447
            G C R +   L+V  Y+ +G                 T +   K LIG    +A+ + +
Sbjct: 95  LGICLRSEGSPLVVLPYMKHGDLRNFIRNE--------THNPTVKDLIGFGLQVAKGMKF 146
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IY--EHGANPQTTHIVGTLGYLA 504
           L    +++ VHRD+   N +LD     K+ DFGLA+ +Y  E  +    T     + ++A
Sbjct: 147 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 203
Query: 505 PELTRTGKATTSTDVYSYGILMLEV 529
            E  +T K TT +DV+S+G+L+ E+
Sbjct: 204 LESLQTQKFTTKSDVWSFGVLLWEL 228

>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Aminopyridine Based Inhibitor Length = 314

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 60/205 (29%), Positives = 102/205 (49%), Gaps = 23/205 (11%)
Query: 337 LVGSGGFGRVYRG-LMPSLG--LEVAIKRIGHNSQQG-MKEFVAEIMSMGRLRHRNLVQL 392
           ++G G FG VY G L+ + G  +  A+K +   +  G + +F+ E + M    H N++ L
Sbjct: 37  VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 393 HGWC-RKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIG----IAQSLLY 447
            G C R +   L+V  Y+ +G                 T +   K LIG    +A+ + +
Sbjct: 97  LGICLRSEGSPLVVLPYMKHGDLRNFIRNE--------THNPTVKDLIGFGLQVAKGMKF 148
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IY--EHGANPQTTHIVGTLGYLA 504
           L    +++ VHRD+   N +LD     K+ DFGLA+ +Y  E  +    T     + ++A
Sbjct: 149 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 205
Query: 505 PELTRTGKATTSTDVYSYGILMLEV 529
            E  +T K TT +DV+S+G+L+ E+
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWEL 230

>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/210 (27%), Positives = 96/210 (45%), Gaps = 11/210 (5%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +G+G FG V+ G   +   +VAIK +   +    + F+ E   M +L+H  LVQL+    
Sbjct: 17  LGNGQFGEVWMGTW-NGNTKVAIKTLKPGTMSP-ESFLEEAQIMKKLKHDKLVQLYA-VV 73
Query: 398 KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTW-DQRYKILIGIAQSLLYLHEECNQRV 456
            ++ + +V +Y+  GS                   D   ++  G+A    Y+        
Sbjct: 74  SEEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMA----YIE---RMNY 126
Query: 457 VHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTS 516
           +HRD++ +NIL+   L  K+ DFGLA++ E             + + APE    G+ T  
Sbjct: 127 IHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIK 186
Query: 517 TDVYSYGILMLEVACGRRSIEPQKAAAELL 546
           +DV+S+GIL+ E+    R   P     E+L
Sbjct: 187 SDVWSFGILLTELVTKGRVPYPGMNNREVL 216

>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With 6-Benzyloxyquinoline Inhibitor Length = 319

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 60/205 (29%), Positives = 102/205 (49%), Gaps = 23/205 (11%)
Query: 337 LVGSGGFGRVYRG-LMPSLG--LEVAIKRIGHNSQQG-MKEFVAEIMSMGRLRHRNLVQL 392
           ++G G FG VY G L+ + G  +  A+K +   +  G + +F+ E + M    H N++ L
Sbjct: 42  VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 101
Query: 393 HGWC-RKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIG----IAQSLLY 447
            G C R +   L+V  Y+ +G                 T +   K LIG    +A+ + +
Sbjct: 102 LGICLRSEGSPLVVLPYMKHGDLRNFIRNE--------THNPTVKDLIGFGLQVAKGMKF 153
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IY--EHGANPQTTHIVGTLGYLA 504
           L    +++ VHRD+   N +LD     K+ DFGLA+ +Y  E  +    T     + ++A
Sbjct: 154 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 210
Query: 505 PELTRTGKATTSTDVYSYGILMLEV 529
            E  +T K TT +DV+S+G+L+ E+
Sbjct: 211 LESLQTQKFTTKSDVWSFGVLLWEL 235

>pdb|1FAT|A Chain A, Phytohemagglutinin-L Length = 252

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 69/248 (27%), Positives = 116/248 (46%), Gaps = 36/248 (14%)
Query: 11  FLYNGFLHANLSLEGAAYISTSGILTVTNKSE------GLIGHALYPNPLRFKTSNKSVA 64
           F +  F   NL L+  A +S+SG L +TN +       G +G A Y  P++   +     
Sbjct: 6   FNFQRFNETNLILQRDASVSSSGQLRLTNLNGNGEPRVGSLGRAFYSAPIQIWDNTTGTV 65
Query: 65  IDFRTNFVFSILPKYPDLGG--QGLAFIIIST-NRPENCLANQFLGLPNITMSSSTKFST 121
             F T+F F+I  + P+  G   GLAF ++   ++P++     FLGL +    S++ F T
Sbjct: 66  ASFATSFTFNI--QVPNNAGPADGLAFALVPVGSQPKD--KGGFLGLFD---GSNSNFHT 118
Query: 122 RMLAVEFDIIQNTELIDINDNHVGIDXXXXXXXXXXXXXYYSGNNHRIPILLRSGDPIQA 181
             +AVEFD + N +  D  + H+GID             + +G N  + I   S      
Sbjct: 119 --VAVEFDTLYNKDW-DPTERHIGIDVNSIRSIKTTRWDFVNGENAEVLITYDS------ 169
Query: 182 WVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLITA---SH 238
                S  +L+   + P    +    ++S  +DL SV+ E++  GFSA+TG+      ++
Sbjct: 170 -----STNLLVASLVYP---SQKTSFIVSDTVDLKSVLPEWVSVGFSATTGINKGNVETN 221
Query: 239 NVHGWSIS 246
           +V  WS +
Sbjct: 222 DVLSWSFA 229

>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed With A Specific Inhibitor Of Human P38 Map Kinase Length = 380

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 92/205 (44%), Gaps = 19/205 (9%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIG-HNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWC 396
           +G G +G V         + VAIK+I     Q   +  + EI  + R RH N++ ++   
Sbjct: 51  IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 110
Query: 397 R-----KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEE 451
           R     +  ++ LV       +                + D     L  I + L Y+H  
Sbjct: 111 RAPTIEQMKDVYLV-------THLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIH-- 161
Query: 452 CNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIY--EHGANPQTTHIVGTLGYLAPELTR 509
            +  V+HRD+KPSN+LL+T  + K+ DFGLA++   +H      T  V T  Y APE+  
Sbjct: 162 -SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 220
Query: 510 TGKA-TTSTDVYSYGILMLEVACGR 533
             K  T S D++S G ++ E+   R
Sbjct: 221 NSKGYTKSIDIWSVGCILAEMLSNR 245

>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a) Kinase Domain In Complex With Dorsomorphin Length = 322

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 96/207 (46%), Gaps = 26/207 (12%)
Query: 341 GGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQD 400
           G FG V++  + +  + V I  I  + Q    E+  E+ S+  ++H N++Q  G  ++  
Sbjct: 35  GRFGCVWKAQLLNEYVAVKIFPI-QDKQSWQNEY--EVYSLPGMKHENILQFIGAEKRGT 91
Query: 401 ----ELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEEC---- 452
               +L L+  +   GS                +W++   I   +A+ L YLHE+     
Sbjct: 92  SVDVDLWLITAFHEKGSLSDFLKANVV------SWNELCHIAETMARGLAYLHEDIPGLK 145
Query: 453 ---NQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTH-IVGTLGYLAPELT 508
                 + HRD+K  N+LL   L A + DFGLA  +E G +   TH  VGT  Y+APE+ 
Sbjct: 146 DGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVL 205
Query: 509 RTG-----KATTSTDVYSYGILMLEVA 530
                    A    D+Y+ G+++ E+A
Sbjct: 206 EGAINFQRDAFLRIDMYAMGLVLWELA 232

>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 63/247 (25%), Positives = 102/247 (41%), Gaps = 20/247 (8%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLRHRNLVQLHGW 395
           +G G F +V        G EVA+K I     +   +++   E+  M  L H N+V+L   
Sbjct: 22  IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 396 CRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQR 455
              +  L LV +Y   G                     R      I  ++ Y H++    
Sbjct: 82  IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-----QIVSAVQYCHQKF--- 133
Query: 456 VVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKAT- 514
           +VHRD+K  N+LLD  +N K+ DFG +  +  G    T    G+  Y APEL +  K   
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT--FCGSPPYAAPELFQGKKYDG 191
Query: 515 TSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYYDLA 574
              DV+S G+++  +  G    + Q        +  ++E  L G+       + D  +L 
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPFDGQN-------LKELRERVLRGKYRIPFYMSTDCENLL 244
Query: 575 EAELVLN 581
           +  L+LN
Sbjct: 245 KKFLILN 251

>pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 68/275 (24%), Positives = 117/275 (42%), Gaps = 32/275 (11%)
Query: 332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIG-HNSQQGMKEFVAEIMSMGRLRHRNLV 390
           F +   +G G FG V++G+       VAIK I    ++  +++   EI  + +     + 
Sbjct: 24  FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83
Query: 391 QLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHE 450
           + +G   K  +L ++ +Y+  GS                T      IL  I + L YLH 
Sbjct: 84  KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIAT------ILREILKGLDYLHS 137
Query: 451 ECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRT 510
           E   + +HRD+K +N+LL  +   KL DFG+A         +    VGT  ++APE+ + 
Sbjct: 138 E---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLT-DTQIKRNXFVGTPFWMAPEVIKQ 193
Query: 511 GKATTSTDVYSYGILMLEVACGR---RSIEPQKAAAELLLVDWVKELHLEGEITQAIDQT 567
               +  D++S GI  +E+A G      + P K    L L+       LEG  ++ + + 
Sbjct: 194 SAYDSKADIWSLGITAIELARGEPPHSELHPMKV---LFLIPKNNPPTLEGNYSKPLKE- 249
Query: 568 LDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVE 602
                  EA         C    P +RP  + +++
Sbjct: 250 -----FVEA---------CLNKEPSFRPTAKELLK 270

>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a Double Mutant Length = 328

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 64/247 (25%), Positives = 102/247 (41%), Gaps = 20/247 (8%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLRHRNLVQLHGW 395
           +G G F +V        G EVAIK I     +   +++   E+  M  L H N+V+L   
Sbjct: 23  IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82
Query: 396 CRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQR 455
              +  L L+ +Y   G                     R      I  ++ Y H+   +R
Sbjct: 83  IETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQ-----IVSAVQYCHQ---KR 134
Query: 456 VVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKAT- 514
           +VHRD+K  N+LLD  +N K+ DFG +  +  G   +     G   Y APEL +  K   
Sbjct: 135 IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG--KLDAFCGAPPYAAPELFQGKKYDG 192
Query: 515 TSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYYDLA 574
              DV+S G+++  +  G    + Q        +  ++E  L G+       + D  +L 
Sbjct: 193 PEVDVWSLGVILYTLVSGSLPFDGQN-------LKELRERVLRGKYRIPFYMSTDCENLL 245
Query: 575 EAELVLN 581
           +  LVLN
Sbjct: 246 KRFLVLN 252

>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino( Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6- Difluoro-Phenyl)-Amide) Length = 349

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 62/204 (30%), Positives = 88/204 (43%), Gaps = 15/204 (7%)
Query: 332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQ 391
           F  ++ +G G    VYR          A+K +     +  K    EI  + RL H N+++
Sbjct: 55  FEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDK--KIVRTEIGVLLRLSHPNIIK 112
Query: 392 LHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEE 451
           L        E+ LV + V  G                   D   +IL  +A    YLHE 
Sbjct: 113 LKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAA-DAVKQILEAVA----YLHE- 166
Query: 452 CNQRVVHRDVKPSNILLDTYLNA---KLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELT 508
               +VHRD+KP N+L  T       K+ DFGL+KI EH    +T  + GT GY APE+ 
Sbjct: 167 --NGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKT--VCGTPGYCAPEIL 222
Query: 509 RTGKATTSTDVYSYGILMLEVACG 532
           R        D++S GI+   + CG
Sbjct: 223 RGCAYGPEVDMWSVGIITYILLCG 246

>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 63/247 (25%), Positives = 102/247 (41%), Gaps = 20/247 (8%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLRHRNLVQLHGW 395
           +G G F +V        G EVA+K I     +   +++   E+  M  L H N+V+L   
Sbjct: 22  IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 396 CRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQR 455
              +  L LV +Y   G                     R      I  ++ Y H++    
Sbjct: 82  IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-----QIVSAVQYCHQKF--- 133
Query: 456 VVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKAT- 514
           +VHRD+K  N+LLD  +N K+ DFG +  +  G    T    G+  Y APEL +  K   
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT--FCGSPPYAAPELFQGKKYDG 191
Query: 515 TSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYYDLA 574
              DV+S G+++  +  G    + Q        +  ++E  L G+       + D  +L 
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPFDGQN-------LKELRERVLRGKYRIPFYMSTDCENLL 244
Query: 575 EAELVLN 581
           +  L+LN
Sbjct: 245 KKFLILN 251

>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972 Length = 314

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 60/205 (29%), Positives = 102/205 (49%), Gaps = 23/205 (11%)
Query: 337 LVGSGGFGRVYRG-LMPSLG--LEVAIKRIGHNSQQG-MKEFVAEIMSMGRLRHRNLVQL 392
           ++G G FG VY G L+ + G  +  A+K +   +  G + +F+ E + M    H N++ L
Sbjct: 37  VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 393 HGWC-RKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIG----IAQSLLY 447
            G C R +   L+V  Y+ +G                 T +   K LIG    +A+ + +
Sbjct: 97  LGICLRSEGSPLVVLPYMKHGDLRNFIRNE--------THNPTVKDLIGFGLQVAKGMKF 148
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IY--EHGANPQTTHIVGTLGYLA 504
           L    +++ VHRD+   N +LD     K+ DFGLA+ +Y  E  +    T     + ++A
Sbjct: 149 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 205
Query: 505 PELTRTGKATTSTDVYSYGILMLEV 529
            E  +T K TT +DV+S+G+L+ E+
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWEL 230

>pdb|1G8W|A Chain A, Improved Structure Of Phytohemagglutinin-L From The Kidney Bean Length = 233

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 69/248 (27%), Positives = 116/248 (46%), Gaps = 36/248 (14%)
Query: 11  FLYNGFLHANLSLEGAAYISTSGILTVTNKSE------GLIGHALYPNPLRFKTSNKSVA 64
           F +  F   NL L+  A +S+SG L +TN +       G +G A Y  P++   +     
Sbjct: 6   FNFQRFNETNLILQRDASVSSSGQLRLTNLNGNGEPRVGSLGRAFYSAPIQIWDNTTGTV 65
Query: 65  IDFRTNFVFSILPKYPDLGG--QGLAFIIIST-NRPENCLANQFLGLPNITMSSSTKFST 121
             F T+F F+I  + P+  G   GLAF ++   ++P++     FLGL +    S++ F T
Sbjct: 66  ASFATSFTFNI--QVPNNAGPADGLAFALVPVGSQPKD--KGGFLGLFD---GSNSNFHT 118
Query: 122 RMLAVEFDIIQNTELIDINDNHVGIDXXXXXXXXXXXXXYYSGNNHRIPILLRSGDPIQA 181
             +AVEFD + N +  D  + H+GID             + +G N  + I   S      
Sbjct: 119 --VAVEFDTLYNKDW-DPTERHIGIDVNSIRSIKTTRWDFVNGENAEVLITYDS------ 169
Query: 182 WVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLITA---SH 238
                S  +L+   + P    +    ++S  +DL SV+ E++  GFSA+TG+      ++
Sbjct: 170 -----STNLLVASLVYP---SQKTSFIVSDTVDLKSVLPEWVSVGFSATTGINKGNVETN 221
Query: 239 NVHGWSIS 246
           +V  WS +
Sbjct: 222 DVLSWSFA 229

>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site Inhibitor Showing High Selectivity Within The Janus Kinase Family Length = 315

Iteration: 1
 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 69/275 (25%), Positives = 117/275 (42%), Gaps = 33/275 (12%)
Query: 338 VGSGGFGRV----YRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLH 393
           +G G FG V    Y  L  + G  VA+K++ H+     ++F  EI  +  L    +V+  
Sbjct: 19  LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 78
Query: 394 G--WCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEE 451
           G  +   +  L LV +Y+P+G                  + QR++  +  ++ LLY  + 
Sbjct: 79  GVSYGPGRQSLRLVMEYLPSGCLR--------------DFLQRHRARLDASRLLLYSSQI 124
Query: 452 C-------NQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGT--LGY 502
           C       ++R VHRD+   NIL+++  + K+ DFGLAK+     +       G   + +
Sbjct: 125 CKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFW 184
Query: 503 LAPELTRTGKATTSTDVYSYGILMLEV--ACGRRSIEPQKAAAELLLVDWVKELHLEGEI 560
            APE       +  +DV+S+G+++ E+   C  +S  P      ++  +           
Sbjct: 185 YAPESLSDNIFSRQSDVWSFGVVLYELFTYCD-KSCSPSAEFLRMMGCERDVPALCRLLE 243
Query: 561 TQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRP 595
                Q L       AE V  L   C AP+P  RP
Sbjct: 244 LLEEGQRLPAPPACPAE-VHELMKLCWAPSPQDRP 277

>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY Mimicking Host Substrates Length = 319

Iteration: 1
 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 62/248 (25%), Positives = 103/248 (41%), Gaps = 22/248 (8%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLRHRNLVQLHGW 395
           +G G F +V        G EVA+K I     +   +++   E+  M  L H N+V+L   
Sbjct: 15  IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 74
Query: 396 CRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQR 455
              +  L LV +Y   G                     +++ ++   Q        C+Q+
Sbjct: 75  IETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEAR--AKFRQIVSAVQY-------CHQK 125
Query: 456 -VVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKAT 514
            +VHRD+K  N+LLD  +N K+ DFG +  +  G    T    G+  Y APEL +  K  
Sbjct: 126 FIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT--FCGSPPYAAPELFQGKKYD 183
Query: 515 -TSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYYDL 573
               DV+S G+++  +  G    + Q           ++E  L G+       + D  +L
Sbjct: 184 GPEVDVWSLGVILYTLVSGSLPFDGQNLKE-------LRERVLRGKYRIPFYMSTDCENL 236
Query: 574 AEAELVLN 581
            +  L+LN
Sbjct: 237 LKKFLILN 244

>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With Ind E804 Length = 324

Iteration: 1
 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 54/198 (27%), Positives = 86/198 (43%), Gaps = 11/198 (5%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMK-EFVAEIMSMGRLRHRNLVQLHGWC 396
           +G G +  VY+G        VA+K I    ++G     + E+  +  L+H N+V LH   
Sbjct: 10  LGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDII 69
Query: 397 RKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQRV 456
             +  L LV++Y+                            L  + + L Y H    Q+V
Sbjct: 70  HTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKL-----FLFQLLRGLAYCH---RQKV 121
Query: 457 VHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPE-LTRTGKATT 515
           +HRD+KP N+L++     KL DFGLA+            +V TL Y  P+ L  +   +T
Sbjct: 122 LHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVV-TLWYRPPDILLGSTDYST 180
Query: 516 STDVYSYGILMLEVACGR 533
             D++  G +  E+A GR
Sbjct: 181 QIDMWGVGCIFYEMATGR 198

>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 57/205 (27%), Positives = 92/205 (44%), Gaps = 19/205 (9%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIG-HNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWC 396
           +G G +G V         + VAIK+I     Q   +  + EI  +   RH N++ ++   
Sbjct: 33  IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDII 92
Query: 397 R-----KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEE 451
           R     +  ++ +V D +                    + D     L  I + L Y+H  
Sbjct: 93  RAPTIEQMKDVYIVQDLMETD-------LYKLLKTQHLSNDHICYFLYQILRGLKYIH-- 143
Query: 452 CNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIY--EHGANPQTTHIVGTLGYLAPELTR 509
            +  V+HRD+KPSN+LL+T  + K+ DFGLA++   +H      T  V T  Y APE+  
Sbjct: 144 -SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 202
Query: 510 TGKA-TTSTDVYSYGILMLEVACGR 533
             K  T S D++S G ++ E+   R
Sbjct: 203 NSKGYTKSIDIWSVGCILAEMLSNR 227

>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1 Length = 317

Iteration: 1
 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 59/205 (28%), Positives = 100/205 (48%), Gaps = 23/205 (11%)
Query: 337 LVGSGGFGRVYRG-LMPSLG--LEVAIKRIGHNSQQG-MKEFVAEIMSMGRLRHRNLVQL 392
           ++G G FG VY G L+ + G  +  A+K +   +  G + +F+ E + M    H N++ L
Sbjct: 38  VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 393 HGWC-RKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIG----IAQSLLY 447
            G C R +   L+V  Y+ +G                 T +   K LIG    +A+ + +
Sbjct: 98  LGICLRSEGSPLVVLPYMKHGDLRNFIRNE--------THNPTVKDLIGFGLQVAKGMKF 149
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIY---EHGANPQTTHIVGTLGYLA 504
           L    +++ VHRD+   N +LD     K+ DFGLA+     E  +    T     + ++A
Sbjct: 150 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMA 206
Query: 505 PELTRTGKATTSTDVYSYGILMLEV 529
            E  +T K TT +DV+S+G+L+ E+
Sbjct: 207 LESLQTQKFTTKSDVWSFGVLLWEL 231

>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316

Iteration: 1
 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 60/227 (26%), Positives = 99/227 (43%), Gaps = 17/227 (7%)
Query: 336 NLVGSGGFGRVY--RGLMPSLGLEVAIKRIGHNSQQGMKEFVA-EIMSMGRLRHRNLVQL 392
            ++G G F  V   R L  S    + I    H  ++    +V  E   M RL H   V+L
Sbjct: 43  KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 102
Query: 393 HGWCRKQDE-LLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEE 451
           + +C + DE L     Y  NG                  +         I  +L YLH  
Sbjct: 103 Y-FCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-----YTAEIVSALEYLH-- 154
Query: 452 CNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE-HGANPQTTHIVGTLGYLAPELTRT 510
             + ++HRD+KP NILL+  ++ ++ DFG AK+        +    VGT  Y++PEL   
Sbjct: 155 -GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 213
Query: 511 GKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLE 557
             A  S+D+++ G ++ ++  G   + P +A  E L+   + +L  +
Sbjct: 214 KSACKSSDLWALGCIIYQLVAG---LPPFRAGNEYLIFQKIIKLEYD 257

>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5- Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 95/210 (45%), Gaps = 25/210 (11%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +G G FG+VY+       +  A K I   S++ +++++ EI  +    H N+V+L     
Sbjct: 45  LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 398 KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQRVV 457
            ++ L ++ ++   G+                T  Q   +      +L YLH   + +++
Sbjct: 105 YENNLWILIEFCAGGA----VDAVMLELERPLTESQIQVVCKQTLDALNYLH---DNKII 157
Query: 458 HRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTH----IVGTLGYLAPE--LTRTG 511
           HRD+K  NIL     + KL DFG++       N +T       +GT  ++APE  +  T 
Sbjct: 158 HRDLKAGNILFTLDGDIKLADFGVS-----AKNTRTIQRRDSFIGTPYWMAPEVVMCETS 212
Query: 512 KATT---STDVYSYGILMLEVACGRRSIEP 538
           K        DV+S GI ++E+A     IEP
Sbjct: 213 KDRPYDYKADVWSLGITLIEMA----EIEP 238

>pdb|3UJO|A Chain A, Galactose-Specific Seed Lectin From Dolichos Lablab In Complex With Adenine And Galactose Length = 281

Iteration: 1
 Score = 66.6 bits (161), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 71/277 (25%), Positives = 120/277 (43%), Gaps = 34/277 (12%)
Query: 3   VVHADTTSFLYNGFLHANLSLEGAAYISTSGILTVTNKSE------GLIGHALYPNPLRF 56
              A+  SF +  F   NL L+  A +S SG L +T  +E      G +G A Y  P++ 
Sbjct: 21  AASANLISFTFKKFNETNLILQRDATVS-SGKLRITKAAENGVPTAGSLGRAFYSTPIQI 79
Query: 57  KTSNKSVAIDFRTNFVFSILPKYPDLGGQGLAFIIIST-NRPENCLANQFLGLPNITMSS 115
             +       + T+F F++          GLAF ++   ++P++     FLGL +   S 
Sbjct: 80  WDNTTGTVASWATSFTFNLQAPNAASPADGLAFALVPVGSQPKD--KGGFLGLFD---SK 134
Query: 116 STKFSTRMLAVEFDIIQNTELIDINDNHVGIDXXXXXXXXXXXXXYYSGNNHRIPILLRS 175
           +   S + +AVEFD   N    D  + H+GID             + +G N  + I   S
Sbjct: 135 NYASSNQTVAVEFDTFYNGGW-DPTERHIGIDVNSIKSIKTTSWDFANGENAEVLITYDS 193
Query: 176 GDPIQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGL-- 233
                      S  +L+   + P    +    ++S  +DL+SV+ E++  GFSA+TGL  
Sbjct: 194 -----------STNLLVASLVHP---SQKTSFIVSERVDLTSVLPEWVSVGFSATTGLSK 239
Query: 234 -ITASHNVHGWSISIG---GKAQDLNPMKVPTLEKRS 266
               ++ V  WS +      K  + N + +  LE ++
Sbjct: 240 GYVETNEVLSWSFASKLSINKEDEENKLAIFNLEGKA 276

>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311

Iteration: 1
 Score = 66.6 bits (161), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 57/226 (25%), Positives = 98/226 (43%), Gaps = 15/226 (6%)
Query: 336 NLVGSGGFGRVY--RGLMPSLGLEVAIKRIGHNSQQGMKEFVA-EIMSMGRLRHRNLVQL 392
            ++G G F  V   R L  S    + I    H  ++    +V  E   M RL H   V+L
Sbjct: 38  KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 393 HGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEEC 452
           +   +  ++L     Y  NG                  +         I  +L YLH   
Sbjct: 98  YFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRF-----YTAEIVSALEYLH--- 149
Query: 453 NQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE-HGANPQTTHIVGTLGYLAPELTRTG 511
            + ++HRD+KP NILL+  ++ ++ DFG AK+        +    VGT  Y++PEL    
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEK 209
Query: 512 KATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLE 557
            A+ S+D+++ G ++ ++  G   + P +A  E L+   + +L  +
Sbjct: 210 SASKSSDLWALGCIIYQLVAG---LPPFRAGNEYLIFQKIIKLEYD 252

>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic Acid ((s)-1,2,2-trimethyl-propyl)-amide Length = 314

Iteration: 1
 Score = 66.6 bits (161), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 54/207 (26%), Positives = 97/207 (46%), Gaps = 29/207 (14%)
Query: 338 VGSGGFGRV----YRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLH 393
           +G G FG V    Y  L  + G  VA+K++ H+     ++F  EI  +  L    +V+  
Sbjct: 18  LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 77
Query: 394 G--WCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEE 451
           G  +   +  L LV +Y+P+G                  + QR++  +  ++ LLY  + 
Sbjct: 78  GVSYGPGRQSLRLVMEYLPSGCLR--------------DFLQRHRARLDASRLLLYSSQI 123
Query: 452 C-------NQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGT--LGY 502
           C       ++R VHRD+   NIL+++  + K+ DFGLAK+     +       G   + +
Sbjct: 124 CKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFW 183
Query: 503 LAPELTRTGKATTSTDVYSYGILMLEV 529
            APE       +  +DV+S+G+++ E+
Sbjct: 184 YAPESLSDNIFSRQSDVWSFGVVLYEL 210

>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 327

Iteration: 1
 Score = 66.6 bits (161), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 54/207 (26%), Positives = 97/207 (46%), Gaps = 29/207 (14%)
Query: 338 VGSGGFGRV----YRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLH 393
           +G G FG V    Y  L  + G  VA+K++ H+     ++F  EI  +  L    +V+  
Sbjct: 31  LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 90
Query: 394 G--WCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEE 451
           G  +   +  L LV +Y+P+G                  + QR++  +  ++ LLY  + 
Sbjct: 91  GVSYGPGRQSLRLVMEYLPSGCLR--------------DFLQRHRARLDASRLLLYSSQI 136
Query: 452 C-------NQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGT--LGY 502
           C       ++R VHRD+   NIL+++  + K+ DFGLAK+     +       G   + +
Sbjct: 137 CKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFW 196
Query: 503 LAPELTRTGKATTSTDVYSYGILMLEV 529
            APE       +  +DV+S+G+++ E+
Sbjct: 197 YAPESLSDNIFSRQSDVWSFGVVLYEL 223

>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328

Iteration: 1
 Score = 66.6 bits (161), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 55/201 (27%), Positives = 85/201 (42%), Gaps = 13/201 (6%)
Query: 335 QNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLRHRNLVQL 392
           Q  +G G F +V        G EVA+K I     +   +++   E+  M  L H N+V+L
Sbjct: 20  QKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKL 79
Query: 393 HGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEEC 452
                 +  L LV +Y   G                     R      I  ++ Y H+  
Sbjct: 80  FEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQ-----IVSAVQYCHQ-- 132
Query: 453 NQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGK 512
            + +VHRD+K  N+LLD  +N K+ DFG +  +  G    T    G+  Y APEL +  K
Sbjct: 133 -KYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDT--FCGSPPYAAPELFQGKK 189
Query: 513 AT-TSTDVYSYGILMLEVACG 532
                 DV+S G+++  +  G
Sbjct: 190 YDGPEVDVWSLGVILYTLVSG 210

>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289

Iteration: 1
 Score = 66.6 bits (161), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 65/250 (26%), Positives = 107/250 (42%), Gaps = 19/250 (7%)
Query: 336 NLVGSGGFGRVY--RGLMPSLGLEVAIKRIGHNSQQGMKEFVA-EIMSMGRLRHRNLVQL 392
            ++G G F  V   R L  S    + I    H  ++    +V  E   M RL H   V+L
Sbjct: 16  KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 75
Query: 393 HGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEEC 452
           +   +  ++L     Y  NG                  +         I  +L YLH   
Sbjct: 76  YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-----YTAEIVSALEYLH--- 127
Query: 453 NQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE-HGANPQTTHIVGTLGYLAPELTRTG 511
            + ++HRD+KP NILL+  ++ ++ DFG AK+        +    VGT  Y++PEL    
Sbjct: 128 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 187
Query: 512 KATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYY 571
            A  S+D+++ G ++ ++  G   + P +A  E L+  + K + LE +  +         
Sbjct: 188 SACKSSDLWALGCIIYQLVAG---LPPFRAGNEYLI--FQKIIKLEYDFPEKFFPKAR-- 240
Query: 572 DLAEAELVLN 581
           DL E  LVL+
Sbjct: 241 DLVEKLLVLD 250

>pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286

Iteration: 1
 Score = 66.6 bits (161), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 65/250 (26%), Positives = 107/250 (42%), Gaps = 19/250 (7%)
Query: 336 NLVGSGGFGRVY--RGLMPSLGLEVAIKRIGHNSQQGMKEFVA-EIMSMGRLRHRNLVQL 392
            ++G G F  V   R L  S    + I    H  ++    +V  E   M RL H   V+L
Sbjct: 13  KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 72
Query: 393 HGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEEC 452
           +   +  ++L     Y  NG                  +         I  +L YLH   
Sbjct: 73  YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-----YTAEIVSALEYLH--- 124
Query: 453 NQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE-HGANPQTTHIVGTLGYLAPELTRTG 511
            + ++HRD+KP NILL+  ++ ++ DFG AK+        +    VGT  Y++PEL    
Sbjct: 125 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 184
Query: 512 KATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYY 571
            A  S+D+++ G ++ ++  G   + P +A  E L+  + K + LE +  +         
Sbjct: 185 SACKSSDLWALGCIIYQLVAG---LPPFRAGNEYLI--FQKIIKLEYDFPEKFFPKAR-- 237
Query: 572 DLAEAELVLN 581
           DL E  LVL+
Sbjct: 238 DLVEKLLVLD 247

>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 290

Iteration: 1
 Score = 66.6 bits (161), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 91/208 (43%), Gaps = 32/208 (15%)
Query: 338 VGSGGFGRV----YRGLMPSLGLEVAIKRIGHNSQQGMKE-FVAEIMSMGRLRHRNLVQL 392
           +G G FG+V    Y       G  VA+K +       ++  +  EI  +  L H ++V+ 
Sbjct: 16  LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 393 HGWCRKQDE--LLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHE 450
            G C  Q E  + LV +YVP GS                  D   +  +G+AQ LL+  +
Sbjct: 76  KGCCEDQGEKSVQLVMEYVPLGSLR----------------DYLPRHCVGLAQLLLFAQQ 119
Query: 451 ECN-------QRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGT--LG 501
            C        Q  +HR +   N+LLD     K+GDFGLAK    G         G   + 
Sbjct: 120 ICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVF 179
Query: 502 YLAPELTRTGKATTSTDVYSYGILMLEV 529
           + APE  +  K   ++DV+S+G+ + E+
Sbjct: 180 WYAPECLKECKFYYASDVWSFGVTLYEL 207

>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286

Iteration: 1
 Score = 66.6 bits (161), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 65/250 (26%), Positives = 107/250 (42%), Gaps = 19/250 (7%)
Query: 336 NLVGSGGFGRVY--RGLMPSLGLEVAIKRIGHNSQQGMKEFVA-EIMSMGRLRHRNLVQL 392
            ++G G F  V   R L  S    + I    H  ++    +V  E   M RL H   V+L
Sbjct: 15  KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 74
Query: 393 HGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEEC 452
           +   +  ++L     Y  NG                  +         I  +L YLH   
Sbjct: 75  YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-----YTAEIVSALEYLH--- 126
Query: 453 NQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE-HGANPQTTHIVGTLGYLAPELTRTG 511
            + ++HRD+KP NILL+  ++ ++ DFG AK+        +    VGT  Y++PEL    
Sbjct: 127 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 186
Query: 512 KATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYY 571
            A  S+D+++ G ++ ++  G   + P +A  E L+  + K + LE +  +         
Sbjct: 187 SACKSSDLWALGCIIYQLVAG---LPPFRAGNEYLI--FQKIIKLEYDFPEKFFPKAR-- 239
Query: 572 DLAEAELVLN 581
           DL E  LVL+
Sbjct: 240 DLVEKLLVLD 249

>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286

Iteration: 1
 Score = 66.6 bits (161), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 65/250 (26%), Positives = 107/250 (42%), Gaps = 19/250 (7%)
Query: 336 NLVGSGGFGRVY--RGLMPSLGLEVAIKRIGHNSQQGMKEFVA-EIMSMGRLRHRNLVQL 392
            ++G G F  V   R L  S    + I    H  ++    +V  E   M RL H   V+L
Sbjct: 14  KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 73
Query: 393 HGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEEC 452
           +   +  ++L     Y  NG                  +         I  +L YLH   
Sbjct: 74  YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-----YTAEIVSALEYLH--- 125
Query: 453 NQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE-HGANPQTTHIVGTLGYLAPELTRTG 511
            + ++HRD+KP NILL+  ++ ++ DFG AK+        +    VGT  Y++PEL    
Sbjct: 126 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 185
Query: 512 KATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYY 571
            A  S+D+++ G ++ ++  G   + P +A  E L+  + K + LE +  +         
Sbjct: 186 SACKSSDLWALGCIIYQLVAG---LPPFRAGNEYLI--FQKIIKLEYDFPEKFFPKAR-- 238
Query: 572 DLAEAELVLN 581
           DL E  LVL+
Sbjct: 239 DLVEKLLVLD 248

>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 291

Iteration: 1
 Score = 66.6 bits (161), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 91/208 (43%), Gaps = 32/208 (15%)
Query: 338 VGSGGFGRV----YRGLMPSLGLEVAIKRIGHNSQQGMKE-FVAEIMSMGRLRHRNLVQL 392
           +G G FG+V    Y       G  VA+K +       ++  +  EI  +  L H ++V+ 
Sbjct: 17  LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 393 HGWCRKQDE--LLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHE 450
            G C  Q E  + LV +YVP GS                  D   +  +G+AQ LL+  +
Sbjct: 77  KGCCEDQGEKSVQLVMEYVPLGSLR----------------DYLPRHCVGLAQLLLFAQQ 120
Query: 451 ECN-------QRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGT--LG 501
            C        Q  +HR +   N+LLD     K+GDFGLAK    G         G   + 
Sbjct: 121 ICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVF 180
Query: 502 YLAPELTRTGKATTSTDVYSYGILMLEV 529
           + APE  +  K   ++DV+S+G+ + E+
Sbjct: 181 WYAPECLKECKFYYASDVWSFGVTLYEL 208

>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead Compound Length = 292

Iteration: 1
 Score = 66.2 bits (160), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 57/226 (25%), Positives = 97/226 (42%), Gaps = 15/226 (6%)
Query: 336 NLVGSGGFGRVY--RGLMPSLGLEVAIKRIGHNSQQGMKEFVA-EIMSMGRLRHRNLVQL 392
            ++G G F  V   R L  S    + I    H  ++    +V  E   M RL H   V+L
Sbjct: 20  KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 79
Query: 393 HGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEEC 452
           +   +  ++L     Y  NG                  +         I  +L YLH   
Sbjct: 80  YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-----YTAEIVSALEYLH--- 131
Query: 453 NQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE-HGANPQTTHIVGTLGYLAPELTRTG 511
            + ++HRD+KP NILL+  ++ ++ DFG AK+        +    VGT  Y++PEL    
Sbjct: 132 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 191
Query: 512 KATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLE 557
            A  S+D+++ G ++ ++  G   + P +A  E L+   + +L  +
Sbjct: 192 SACKSSDLWALGCIIYQLVAG---LPPFRAGNEYLIFQKIIKLEYD 234

>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex Length = 292

Iteration: 1
 Score = 66.2 bits (160), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 53/204 (25%), Positives = 94/204 (46%), Gaps = 12/204 (5%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIG-HNSQQGM-KEFVAEIMSMGRLRHRNLVQLHGW 395
           +G G +G V++         VA+KR+   +  +G+    + EI  +  L+H+N+V+LH  
Sbjct: 10  IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 396 CRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQR 455
                +L LV+++                             L  + + L + H   ++ 
Sbjct: 70  LHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVK-----SFLFQLLKGLGFCH---SRN 121
Query: 456 VVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKA-T 514
           V+HRD+KP N+L++     KL DFGLA+ +       +  +V TL Y  P++    K  +
Sbjct: 122 VLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVV-TLWYRPPDVLFGAKLYS 180
Query: 515 TSTDVYSYGILMLEVACGRRSIEP 538
           TS D++S G +  E+A   R + P
Sbjct: 181 TSIDMWSAGCIFAELANAARPLFP 204

>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 318

Iteration: 1
 Score = 66.2 bits (160), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 62/211 (29%), Positives = 92/211 (43%), Gaps = 38/211 (18%)
Query: 338 VGSGGFGRV----YRGLMPSLGLEVAIKRI----GHNSQQGMKEFVAEIMSMGRLRHRNL 389
           +G G FG+V    Y       G  VA+K +    G   + G K+   EI  +  L H ++
Sbjct: 39  LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQ---EIDILRTLYHEHI 95
Query: 390 VQLHGWCRKQD--ELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
           ++  G C       L LV +YVP GS                  D   +  IG+AQ LL+
Sbjct: 96  IKYKGCCEDAGAASLQLVMEYVPLGSLR----------------DYLPRHSIGLAQLLLF 139
Query: 448 LHEECN-------QRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVG-- 498
             + C        Q  +HRD+   N+LLD     K+GDFGLAK    G         G  
Sbjct: 140 AQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDS 199
Query: 499 TLGYLAPELTRTGKATTSTDVYSYGILMLEV 529
            + + APE  +  K   ++DV+S+G+ + E+
Sbjct: 200 PVFWYAPECLKEYKFYYASDVWSFGVTLYEL 230

>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = 314

Iteration: 1
 Score = 66.2 bits (160), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 66/250 (26%), Positives = 107/250 (42%), Gaps = 19/250 (7%)
Query: 336 NLVGSGGFGRVY--RGLMPSLGLEVAIKRIGHNSQQGMKEFVA-EIMSMGRLRHRNLVQL 392
            ++G G F  V   R L  S    + I    H  ++    +V  E   M RL H   V+L
Sbjct: 41  KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 100
Query: 393 HGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEEC 452
           +   +  ++L     Y  NG                  +         I  +L YLH   
Sbjct: 101 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-----YTAEIVSALEYLH--- 152
Query: 453 NQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE-HGANPQTTHIVGTLGYLAPELTRTG 511
            + ++HRD+KP NILL+  ++ ++ DFG AK+        +    VGT  Y++PEL    
Sbjct: 153 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 212
Query: 512 KATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYY 571
            A  S+D+++ G ++ ++  G   + P +A  E L+  + K + LE +   A        
Sbjct: 213 SACKSSDLWALGCIIYQLVAG---LPPFRAGNEYLI--FQKIIKLEYDFPAAFFPKAR-- 265
Query: 572 DLAEAELVLN 581
           DL E  LVL+
Sbjct: 266 DLVEKLLVLD 275

>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7 Length = 311

Iteration: 1
 Score = 66.2 bits (160), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 57/226 (25%), Positives = 97/226 (42%), Gaps = 15/226 (6%)
Query: 336 NLVGSGGFGRVY--RGLMPSLGLEVAIKRIGHNSQQGMKEFVA-EIMSMGRLRHRNLVQL 392
            ++G G F  V   R L  S    + I    H  ++    +V  E   M RL H   V+L
Sbjct: 35  KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 94
Query: 393 HGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEEC 452
           +   +  ++L     Y  NG                  +         I  +L YLH   
Sbjct: 95  YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-----YTAEIVSALEYLH--- 146
Query: 453 NQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE-HGANPQTTHIVGTLGYLAPELTRTG 511
            + ++HRD+KP NILL+  ++ ++ DFG AK+        +    VGT  Y++PEL    
Sbjct: 147 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEK 206
Query: 512 KATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLE 557
            A  S+D+++ G ++ ++  G   + P +A  E L+   + +L  +
Sbjct: 207 SACKSSDLWALGCIIYQLVAG---LPPFRAGNEYLIFQKIIKLEYD 249

>pdb|1LUL|A Chain A, Db58, A Legume Lectin From Dolichos Biflorus Length = 253

Iteration: 1
 Score = 66.2 bits (160), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 65/250 (26%), Positives = 110/250 (44%), Gaps = 29/250 (11%)
Query: 6   ADTTSFLYNGFLHANLSLEGAAYISTSGILTVTNKSEGL-----IGHALYPNPLRFKTSN 60
           AD  SF +  F  ++  L+G A +S+S +     K  GL     +G A Y +P++    +
Sbjct: 1   ADIQSFSFKNFNSSSFILQGDATVSSSKLRLTKVKGNGLPTLSSLGRAFYSSPIQIYDKS 60
Query: 61  KSVAIDFRTNFVFSILPKYPDLGGQGLAFIIIST-NRPENCLANQFLGLPNITMSSSTKF 119
                 + T+F  +I          G+AF ++   + P++   + FLG+ +   S     
Sbjct: 61  TGAVASWATSFTANIFAPNKSSSADGIAFALVPVGSEPKSN--SGFLGVFD---SDVYDN 115
Query: 120 STRMLAVEFDIIQNTELIDINDNHVGIDXXXXXXXXXXXXXYYSGNNHRIPILLRSGDPI 179
           S + +AVEFD   NT+  D    H+GID               +G N  I I        
Sbjct: 116 SAQTVAVEFDTFSNTDW-DPTSRHIGIDVNSIKSIRTASWGLANGQNAEILIT------- 167
Query: 180 QAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGL---ITA 236
                Y++   L+  S+        Y  ++S  +D+++ + EY+  GFSA+TGL    T 
Sbjct: 168 -----YNAATSLLVASLVHPSRRTSY--IVSERVDITNELPEYVSIGFSATTGLSEGYTE 220
Query: 237 SHNVHGWSIS 246
           +H+V  WS +
Sbjct: 221 THDVLSWSFA 230

>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: K82r Mutant Length = 327

Iteration: 1
 Score = 66.2 bits (160), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 62/247 (25%), Positives = 102/247 (41%), Gaps = 20/247 (8%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLRHRNLVQLHGW 395
           +G G F +V        G EVA++ I     +   +++   E+  M  L H N+V+L   
Sbjct: 22  IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 396 CRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQR 455
              +  L LV +Y   G                     R      I  ++ Y H++    
Sbjct: 82  IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-----QIVSAVQYCHQKF--- 133
Query: 456 VVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKAT- 514
           +VHRD+K  N+LLD  +N K+ DFG +  +  G    T    G+  Y APEL +  K   
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT--FCGSPPYAAPELFQGKKYDG 191
Query: 515 TSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYYDLA 574
              DV+S G+++  +  G    + Q        +  ++E  L G+       + D  +L 
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPFDGQN-------LKELRERVLRGKYRIPFYMSTDCENLL 244
Query: 575 EAELVLN 581
           +  L+LN
Sbjct: 245 KKFLILN 251

>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 311

Iteration: 1
 Score = 66.2 bits (160), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 94/205 (45%), Gaps = 14/205 (6%)
Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS---QQGMKEFVAEIMSMGR-LRHRNLVQL 392
            +G GGF + +  +  +   EV   +I   S   +   +E ++  +S+ R L H+++V  
Sbjct: 24  FLGKGGFAKCFE-ISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF 82
Query: 393 HGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEEC 452
           HG+    D + +V +     S                 +  R +I++G      YLH   
Sbjct: 83  HGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-QIVLGCQ----YLH--- 134
Query: 453 NQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGK 512
             RV+HRD+K  N+ L+  L  K+GDFGLA   E+    + T + GT  Y+APE+     
Sbjct: 135 RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTPNYIAPEVLSKKG 193
Query: 513 ATTSTDVYSYGILMLEVACGRRSIE 537
            +   DV+S G +M  +  G+   E
Sbjct: 194 HSFEVDVWSIGCIMYTLLVGKPPFE 218

>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 66.2 bits (160), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 57/226 (25%), Positives = 97/226 (42%), Gaps = 15/226 (6%)
Query: 336 NLVGSGGFGRVY--RGLMPSLGLEVAIKRIGHNSQQGMKEFVA-EIMSMGRLRHRNLVQL 392
            ++G G F  V   R L  S    + I    H  ++    +V  E   M RL H   V+L
Sbjct: 36  KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 95
Query: 393 HGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEEC 452
           +   +  ++L     Y  NG                  +         I  +L YLH   
Sbjct: 96  YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-----YTAEIVSALEYLH--- 147
Query: 453 NQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE-HGANPQTTHIVGTLGYLAPELTRTG 511
            + ++HRD+KP NILL+  ++ ++ DFG AK+        +    VGT  Y++PEL    
Sbjct: 148 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 207
Query: 512 KATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLE 557
            A  S+D+++ G ++ ++  G   + P +A  E L+   + +L  +
Sbjct: 208 SACKSSDLWALGCIIYQLVAG---LPPFRAGNEYLIFQKIIKLEYD 250

>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 315

Iteration: 1
 Score = 66.2 bits (160), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 91/206 (44%), Gaps = 16/206 (7%)
Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMG-----RLRHRNLVQ 391
            +G GGF + +  +  +   EV   +I   S   +K    E MSM       L H+++V 
Sbjct: 28  FLGKGGFAKCFE-ISDADTKEVFAGKIVPKSLL-LKPHQREKMSMEISIHRSLAHQHVVG 85
Query: 392 LHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEE 451
            HG+    D + +V +     S                 +  R +I++G      YLH  
Sbjct: 86  FHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-QIVLGCQ----YLH-- 138
Query: 452 CNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTG 511
              RV+HRD+K  N+ L+  L  K+GDFGLA   E+    + T + GT  Y+APE+    
Sbjct: 139 -RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTPNYIAPEVLSKK 196
Query: 512 KATTSTDVYSYGILMLEVACGRRSIE 537
             +   DV+S G +M  +  G+   E
Sbjct: 197 GHSFEVDVWSIGCIMYTLLVGKPPFE 222

>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ly333531 Length = 310

Iteration: 1
 Score = 66.2 bits (160), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 57/226 (25%), Positives = 97/226 (42%), Gaps = 15/226 (6%)
Query: 336 NLVGSGGFGRVY--RGLMPSLGLEVAIKRIGHNSQQGMKEFVA-EIMSMGRLRHRNLVQL 392
            ++G G F  V   R L  S    + I    H  ++    +V  E   M RL H   V+L
Sbjct: 36  KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 95
Query: 393 HGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEEC 452
           +   +  ++L     Y  NG                  +         I  +L YLH   
Sbjct: 96  YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-----YTAEIVSALEYLH--- 147
Query: 453 NQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE-HGANPQTTHIVGTLGYLAPELTRTG 511
            + ++HRD+KP NILL+  ++ ++ DFG AK+        +    VGT  Y++PEL    
Sbjct: 148 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 207
Query: 512 KATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLE 557
            A  S+D+++ G ++ ++  G   + P +A  E L+   + +L  +
Sbjct: 208 SACKSSDLWALGCIIYQLVAG---LPPFRAGNEYLIFQKIIKLEYD 250

>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311

Iteration: 1
 Score = 66.2 bits (160), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 36/105 (34%), Positives = 56/105 (53%), Gaps = 5/105 (4%)
Query: 430 TWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGA 489
           T  +  +++    Q+L + H+     ++HRDVKP+NIL+      K+ DFG+A+      
Sbjct: 114 TPKRAIEVIADACQALNFSHQNG---IIHRDVKPANILISATNAVKVVDFGIARAIADSG 170
Query: 490 NP--QTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACG 532
           N   QT  ++GT  YL+PE  R       +DVYS G ++ EV  G
Sbjct: 171 NSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215

>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The Kinase Domain Of Focal Adhesion Kinase With A Phosphorylated Activation Loop Length = 276

Iteration: 1
 Score = 66.2 bits (160), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 49/203 (24%), Positives = 99/203 (48%), Gaps = 26/203 (12%)
Query: 338 VGSGGFGRVYRGLMPSL---GLEVAIKRIGHNSQQGMKE-FVAEIMSMGRLRHRNLVQLH 393
           +G G FG V++G+  S     + VAIK   + +   ++E F+ E ++M +  H ++V+L 
Sbjct: 18  IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 394 GWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEEC- 452
           G    ++ + ++ +    G                 ++ Q  K  + +A  +LY ++   
Sbjct: 78  G-VITENPVWIIMELCTLGELR--------------SFLQVRKFSLDLASLILYAYQLST 122
Query: 453 ------NQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPE 506
                 ++R VHRD+   N+L+ +    KLGDFGL++  E     + +     + ++APE
Sbjct: 123 ALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPE 182
Query: 507 LTRTGKATTSTDVYSYGILMLEV 529
                + T+++DV+ +G+ M E+
Sbjct: 183 SINFRRFTSASDVWMFGVCMWEI 205

>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6 Length = 311

Iteration: 1
 Score = 66.2 bits (160), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 57/226 (25%), Positives = 97/226 (42%), Gaps = 15/226 (6%)
Query: 336 NLVGSGGFGRVY--RGLMPSLGLEVAIKRIGHNSQQGMKEFVA-EIMSMGRLRHRNLVQL 392
            ++G G F  V   R L  S    + I    H  ++    +V  E   M RL H   V+L
Sbjct: 35  KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 94
Query: 393 HGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEEC 452
           +   +  ++L     Y  NG                  +         I  +L YLH   
Sbjct: 95  YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-----YTAEIVSALEYLH--- 146
Query: 453 NQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE-HGANPQTTHIVGTLGYLAPELTRTG 511
            + ++HRD+KP NILL+  ++ ++ DFG AK+        +    VGT  Y++PEL    
Sbjct: 147 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 206
Query: 512 KATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLE 557
            A  S+D+++ G ++ ++  G   + P +A  E L+   + +L  +
Sbjct: 207 SACKSSDLWALGCIIYQLVAG---LPPFRAGNEYLIFQKIIKLEYD 249

>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded Form) Length = 325

Iteration: 1
 Score = 66.2 bits (160), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 94/206 (45%), Gaps = 17/206 (8%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +G G FG+VY+       +  A K I   S++ +++++ EI  +    H N+V+L     
Sbjct: 45  LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 398 KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQRVV 457
            ++ L ++ ++   G+                T  Q   +      +L YLH   + +++
Sbjct: 105 YENNLWILIEFCAGGA----VDAVMLELERPLTESQIQVVCKQTLDALNYLH---DNKII 157
Query: 458 HRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPE--LTRTGKATT 515
           HRD+K  NIL     + KL DFG++         + + I GT  ++APE  +  T K   
Sbjct: 158 HRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFI-GTPYWMAPEVVMCETSKDRP 216
Query: 516 ---STDVYSYGILMLEVACGRRSIEP 538
                DV+S GI ++E+A     IEP
Sbjct: 217 YDYKADVWSLGITLIEMA----EIEP 238

>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In Complex With Compound 9 Length = 311

Iteration: 1
 Score = 66.2 bits (160), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 57/226 (25%), Positives = 97/226 (42%), Gaps = 15/226 (6%)
Query: 336 NLVGSGGFGRVY--RGLMPSLGLEVAIKRIGHNSQQGMKEFVA-EIMSMGRLRHRNLVQL 392
            ++G G F  V   R L  S    + I    H  ++    +V  E   M RL H   V+L
Sbjct: 38  KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 393 HGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEEC 452
           +   +  ++L     Y  NG                  +         I  +L YLH   
Sbjct: 98  YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-----YTAEIVSALEYLH--- 149
Query: 453 NQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE-HGANPQTTHIVGTLGYLAPELTRTG 511
            + ++HRD+KP NILL+  ++ ++ DFG AK+        +    VGT  Y++PEL    
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 512 KATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLE 557
            A  S+D+++ G ++ ++  G   + P +A  E L+   + +L  +
Sbjct: 210 SACKSSDLWALGCIIYQLVAG---LPPFRAGNEYLIFQKIIKLEYD 252

>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase- 1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine Inhibitor Length = 312

Iteration: 1
 Score = 66.2 bits (160), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 57/226 (25%), Positives = 97/226 (42%), Gaps = 15/226 (6%)
Query: 336 NLVGSGGFGRVY--RGLMPSLGLEVAIKRIGHNSQQGMKEFVA-EIMSMGRLRHRNLVQL 392
            ++G G F  V   R L  S    + I    H  ++    +V  E   M RL H   V+L
Sbjct: 39  KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 98
Query: 393 HGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEEC 452
           +   +  ++L     Y  NG                  +         I  +L YLH   
Sbjct: 99  YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-----YTAEIVSALEYLH--- 150
Query: 453 NQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE-HGANPQTTHIVGTLGYLAPELTRTG 511
            + ++HRD+KP NILL+  ++ ++ DFG AK+        +    VGT  Y++PEL    
Sbjct: 151 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEK 210
Query: 512 KATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLE 557
            A  S+D+++ G ++ ++  G   + P +A  E L+   + +L  +
Sbjct: 211 SACKSSDLWALGCIIYQLVAG---LPPFRAGNEYLIFQKIIKLEYD 253

>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i Length = 312

Iteration: 1
 Score = 66.2 bits (160), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 57/226 (25%), Positives = 97/226 (42%), Gaps = 15/226 (6%)
Query: 336 NLVGSGGFGRVY--RGLMPSLGLEVAIKRIGHNSQQGMKEFVA-EIMSMGRLRHRNLVQL 392
            ++G G F  V   R L  S    + I    H  ++    +V  E   M RL H   V+L
Sbjct: 39  KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 98
Query: 393 HGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEEC 452
           +   +  ++L     Y  NG                  +         I  +L YLH   
Sbjct: 99  YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-----YTAEIVSALEYLH--- 150
Query: 453 NQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE-HGANPQTTHIVGTLGYLAPELTRTG 511
            + ++HRD+KP NILL+  ++ ++ DFG AK+        +    VGT  Y++PEL    
Sbjct: 151 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 210
Query: 512 KATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLE 557
            A  S+D+++ G ++ ++  G   + P +A  E L+   + +L  +
Sbjct: 211 SACKSSDLWALGCIIYQLVAG---LPPFRAGNEYLIFQKIIKLEYD 253

>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3- Phosphoinositide Dependent Kinase (Pdk1) Length = 311

Iteration: 1
 Score = 66.2 bits (160), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 57/226 (25%), Positives = 97/226 (42%), Gaps = 15/226 (6%)
Query: 336 NLVGSGGFGRVY--RGLMPSLGLEVAIKRIGHNSQQGMKEFVA-EIMSMGRLRHRNLVQL 392
            ++G G F  V   R L  S    + I    H  ++    +V  E   M RL H   V+L
Sbjct: 38  KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 393 HGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEEC 452
           +   +  ++L     Y  NG                  +         I  +L YLH   
Sbjct: 98  YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-----YTAEIVSALEYLH--- 149
Query: 453 NQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE-HGANPQTTHIVGTLGYLAPELTRTG 511
            + ++HRD+KP NILL+  ++ ++ DFG AK+        +    VGT  Y++PEL    
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 512 KATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLE 557
            A  S+D+++ G ++ ++  G   + P +A  E L+   + +L  +
Sbjct: 210 SACKSSDLWALGCIIYQLVAG---LPPFRAGNEYLIFQKIIKLEYD 252

>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With Nms-P937 Length = 311

Iteration: 1
 Score = 66.2 bits (160), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 94/205 (45%), Gaps = 14/205 (6%)
Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS---QQGMKEFVAEIMSMGR-LRHRNLVQL 392
            +G GGF + +  +  +   EV   +I   S   +   +E ++  +S+ R L H+++V  
Sbjct: 24  FLGKGGFAKCFE-ISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF 82
Query: 393 HGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEEC 452
           HG+    D + +V +     S                 +  R +I++G      YLH   
Sbjct: 83  HGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-QIVLGCQ----YLH--- 134
Query: 453 NQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGK 512
             RV+HRD+K  N+ L+  L  K+GDFGLA   E+    + T + GT  Y+APE+     
Sbjct: 135 RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTPNYIAPEVLSKKG 193
Query: 513 ATTSTDVYSYGILMLEVACGRRSIE 537
            +   DV+S G +M  +  G+   E
Sbjct: 194 HSFEVDVWSIGCIMYTLLVGKPPFE 218

>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through Fragment-Based Lead Discovery Length = 311

Iteration: 1
 Score = 66.2 bits (160), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 57/226 (25%), Positives = 97/226 (42%), Gaps = 15/226 (6%)
Query: 336 NLVGSGGFGRVY--RGLMPSLGLEVAIKRIGHNSQQGMKEFVA-EIMSMGRLRHRNLVQL 392
            ++G G F  V   R L  S    + I    H  ++    +V  E   M RL H   V+L
Sbjct: 38  KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 393 HGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEEC 452
           +   +  ++L     Y  NG                  +         I  +L YLH   
Sbjct: 98  YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-----YTAEIVSALEYLH--- 149
Query: 453 NQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE-HGANPQTTHIVGTLGYLAPELTRTG 511
            + ++HRD+KP NILL+  ++ ++ DFG AK+        +    VGT  Y++PEL    
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 512 KATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLE 557
            A  S+D+++ G ++ ++  G   + P +A  E L+   + +L  +
Sbjct: 210 SACKSSDLWALGCIIYQLVAG---LPPFRAGNEYLIFQKIIKLEYD 252

>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain Length = 310

Iteration: 1
 Score = 65.9 bits (159), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 57/226 (25%), Positives = 97/226 (42%), Gaps = 15/226 (6%)
Query: 336 NLVGSGGFGRVY--RGLMPSLGLEVAIKRIGHNSQQGMKEFVA-EIMSMGRLRHRNLVQL 392
            ++G G F  V   R L  S    + I    H  ++    +V  E   M RL H   V+L
Sbjct: 36  KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 95
Query: 393 HGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEEC 452
           +   +  ++L     Y  NG                  +         I  +L YLH   
Sbjct: 96  YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-----YTAEIVSALEYLH--- 147
Query: 453 NQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE-HGANPQTTHIVGTLGYLAPELTRTG 511
            + ++HRD+KP NILL+  ++ ++ DFG AK+        +    VGT  Y++PEL    
Sbjct: 148 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEK 207
Query: 512 KATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLE 557
            A  S+D+++ G ++ ++  G   + P +A  E L+   + +L  +
Sbjct: 208 SACKSSDLWALGCIIYQLVAG---LPPFRAGNEYLIFQKIIKLEYD 250

>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase Domain From Human Length = 314

Iteration: 1
 Score = 65.9 bits (159), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 61/208 (29%), Positives = 93/208 (44%), Gaps = 29/208 (13%)
Query: 341 GGFGRVYRG-LMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRK- 398
           G FG V++  LM      VA+K      +Q  +    EI S   ++H NL+Q     ++ 
Sbjct: 26  GRFGCVWKAQLMNDF---VAVKIFPLQDKQSWQS-EREIFSTPGMKHENLLQFIAAEKRG 81
Query: 399 ---QDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEEC--- 452
              + EL L+  +   GS                TW++   +   +++ L YLHE+    
Sbjct: 82  SNLEVELWLITAFHDKGSLTDYLKGNII------TWNELCHVAETMSRGLSYLHEDVPWC 135
Query: 453 -----NQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTH-IVGTLGYLAPE 506
                   + HRD K  N+LL + L A L DFGLA  +E G  P  TH  VGT  Y+APE
Sbjct: 136 RGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPE 195
Query: 507 LTRTG-----KATTSTDVYSYGILMLEV 529
           +          A    D+Y+ G+++ E+
Sbjct: 196 VLEGAINFQRDAFLRIDMYAMGLVLWEL 223

>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7 Length = 346

Iteration: 1
 Score = 65.9 bits (159), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 95/213 (44%), Gaps = 20/213 (9%)
Query: 324 ELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRI--GHNSQ--QGM-KEFVAEI 378
           ++ S  K + + + +G G F  VY+    +    VAIK+I  GH S+   G+ +  + EI
Sbjct: 4   DVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREI 63
Query: 379 MSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKIL 438
             +  L H N++ L      +  + LV+D++                    T       +
Sbjct: 64  KLLQELSHPNIIGLLDAFGHKSNISLVFDFM-----ETDLEVIIKDNSLVLTPSHIKAYM 118
Query: 439 IGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVG 498
           +   Q L YLH+     ++HRD+KP+N+LLD     KL DFGLAK +    N    H V 
Sbjct: 119 LMTLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSF-GSPNRAYXHQVV 174
Query: 499 TLGYLAPELTRTGKATTSTDVYSYGILMLEVAC 531
           T  Y APEL    +      +Y  G+ M  V C
Sbjct: 175 TRWYRAPELLFGAR------MYGVGVDMWAVGC 201

>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-293 In Complex With Atp Length = 293

Iteration: 1
 Score = 65.9 bits (159), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 16/218 (7%)
Query: 319 RFKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMK-EFVAE 377
           R+K AE   +   +  ++++G+G F  V           VAIK I   + +G +     E
Sbjct: 9   RWKQAE--DIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENE 66
Query: 378 IMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKI 437
           I  + +++H N+V L         L L+   V  G                 +     ++
Sbjct: 67  IAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS-----RL 121
Query: 438 LIGIAQSLLYLHEECNQRVVHRDVKPSNIL---LDTYLNAKLGDFGLAKIYEHGANPQTT 494
           +  +  ++ YLH   +  +VHRD+KP N+L   LD      + DFGL+K+ + G+   T 
Sbjct: 122 IFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTA 178
Query: 495 HIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACG 532
              GT GY+APE+      + + D +S G++   + CG
Sbjct: 179 --CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214

>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 65.9 bits (159), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 57/205 (27%), Positives = 92/205 (44%), Gaps = 19/205 (9%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIG-HNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWC 396
           +G G +G V         + VAIK+I     Q   +  + EI  +   RH N++ ++   
Sbjct: 33  IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDII 92
Query: 397 R-----KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEE 451
           R     +  ++ +V D +                    + D     L  I + L Y+H  
Sbjct: 93  RAPTIEQMKDVYIVQDLMETD-------LYKLLKTQHLSNDHICYFLYQILRGLKYIH-- 143
Query: 452 CNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIY--EHGANPQTTHIVGTLGYLAPELTR 509
            +  V+HRD+KPSN+LL+T  + K+ DFGLA++   +H      T  V T  Y APE+  
Sbjct: 144 -SANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 202
Query: 510 TGKA-TTSTDVYSYGILMLEVACGR 533
             K  T S D++S G ++ E+   R
Sbjct: 203 NSKGYTKSIDIWSVGCILAEMLSNR 227

>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321

Iteration: 1
 Score = 65.9 bits (159), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 56/204 (27%), Positives = 97/204 (47%), Gaps = 18/204 (8%)
Query: 336 NLVGSGGFGRVY---RGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMS---MGRLRHRNL 389
            ++G G FG+V+   +   P  G   A+K +   + + +++ V   M    +  + H  +
Sbjct: 34  KVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLK-VRDRVRTKMERDILADVNHPFV 92
Query: 390 VQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLH 449
           V+LH   + + +L L+ D++  G                  +      L  +A  L +LH
Sbjct: 93  VKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKF-----YLAELALGLDHLH 147
Query: 450 EECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IYEHGANPQTTHIVGTLGYLAPELT 508
              +  +++RD+KP NILLD   + KL DFGL+K   +H    +     GT+ Y+APE+ 
Sbjct: 148 ---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDH--EKKAYSFCGTVEYMAPEVV 202
Query: 509 RTGKATTSTDVYSYGILMLEVACG 532
                + S D +SYG+LM E+  G
Sbjct: 203 NRQGHSHSADWWSYGVLMFEMLTG 226

>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-320 In Complex With Atp Length = 320

Iteration: 1
 Score = 65.9 bits (159), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 16/218 (7%)
Query: 319 RFKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMK-EFVAE 377
           R+K AE   +   +  ++++G+G F  V           VAIK I   + +G +     E
Sbjct: 9   RWKQAE--DIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENE 66
Query: 378 IMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKI 437
           I  + +++H N+V L         L L+   V  G                 +     ++
Sbjct: 67  IAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS-----RL 121
Query: 438 LIGIAQSLLYLHEECNQRVVHRDVKPSNIL---LDTYLNAKLGDFGLAKIYEHGANPQTT 494
           +  +  ++ YLH   +  +VHRD+KP N+L   LD      + DFGL+K+ + G+   T 
Sbjct: 122 IFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTA 178
Query: 495 HIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACG 532
              GT GY+APE+      + + D +S G++   + CG
Sbjct: 179 --CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214

>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-315 In Complex With Atp Length = 315

Iteration: 1
 Score = 65.9 bits (159), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 16/218 (7%)
Query: 319 RFKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMK-EFVAE 377
           R+K AE   +   +  ++++G+G F  V           VAIK I   + +G +     E
Sbjct: 9   RWKQAE--DIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENE 66
Query: 378 IMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKI 437
           I  + +++H N+V L         L L+   V  G                 +     ++
Sbjct: 67  IAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS-----RL 121
Query: 438 LIGIAQSLLYLHEECNQRVVHRDVKPSNIL---LDTYLNAKLGDFGLAKIYEHGANPQTT 494
           +  +  ++ YLH   +  +VHRD+KP N+L   LD      + DFGL+K+ + G+   T 
Sbjct: 122 IFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTA 178
Query: 495 HIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACG 532
              GT GY+APE+      + + D +S G++   + CG
Sbjct: 179 --CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214

>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid- Regulated Kinase 1 In Complex With Amp-Pnp Length = 373

Iteration: 1
 Score = 65.5 bits (158), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 69/240 (28%), Positives = 104/240 (43%), Gaps = 20/240 (8%)
Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMS-----MGRLRHRNLVQ 391
           ++G G FG+V      +  +  A+K +   +    KE    IMS     +  ++H  LV 
Sbjct: 45  VIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKE-EKHIMSERNVLLKNVKHPFLVG 103
Query: 392 LHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIG-IAQSLLYLHE 450
           LH   +  D+L  V DY+  G                   + R +     IA +L YLH 
Sbjct: 104 LHFSFQTADKLYFVLDYINGGELFYHLQRERCFL------EPRARFYAAEIASALGYLH- 156
Query: 451 ECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKI-YEHGANPQTTHIVGTLGYLAPELTR 509
             +  +V+RD+KP NILLD+  +  L DFGL K   EH  N  T+   GT  YLAPE+  
Sbjct: 157 --SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEH--NSTTSTFCGTPEYLAPEVLH 212
Query: 510 TGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLD 569
                 + D +  G ++ E+  G       +  AE+      K L L+  IT +    L+
Sbjct: 213 KQPYDRTVDWWCLGAVLYEMLYGLPPFY-SRNTAEMYDNILNKPLQLKPNITNSARHLLE 271

>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium Tuberculosis Pknb. Length = 311

Iteration: 1
 Score = 65.5 bits (158), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 5/105 (4%)
Query: 430 TWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGA 489
           T  +  +++    Q+L + H+     ++HRDVKP+NI++      K+ DFG+A+      
Sbjct: 114 TPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSG 170
Query: 490 NP--QTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACG 532
           N   QT  ++GT  YL+PE  R       +DVYS G ++ EV  G
Sbjct: 171 NSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215

>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311

Iteration: 1
 Score = 65.5 bits (158), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 5/105 (4%)
Query: 430 TWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGA 489
           T  +  +++    Q+L + H+     ++HRDVKP+NI++      K+ DFG+A+      
Sbjct: 114 TPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSG 170
Query: 490 NP--QTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACG 532
           N   QT  ++GT  YL+PE  R       +DVYS G ++ EV  G
Sbjct: 171 NSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215

>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311

Iteration: 1
 Score = 65.5 bits (158), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 5/105 (4%)
Query: 430 TWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGA 489
           T  +  +++    Q+L + H+     ++HRDVKP+NI++      K+ DFG+A+      
Sbjct: 114 TPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSG 170
Query: 490 NP--QTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACG 532
           N   QT  ++GT  YL+PE  R       +DVYS G ++ EV  G
Sbjct: 171 NSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215

>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311

Iteration: 1
 Score = 65.5 bits (158), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 5/105 (4%)
Query: 430 TWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGA 489
           T  +  +++    Q+L + H+     ++HRDVKP+NI++      K+ DFG+A+      
Sbjct: 114 TPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSG 170
Query: 490 NP--QTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACG 532
           N   QT  ++GT  YL+PE  R       +DVYS G ++ EV  G
Sbjct: 171 NSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215

>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e Double Mutant Length = 327

Iteration: 1
 Score = 65.5 bits (158), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 61/247 (24%), Positives = 102/247 (41%), Gaps = 20/247 (8%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLRHRNLVQLHGW 395
           +G G F +V        G EVA++ I     +   +++   E+  M  L H N+V+L   
Sbjct: 22  IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 396 CRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQR 455
              +  L LV +Y   G                     R      I  ++ Y H++    
Sbjct: 82  IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-----QIVSAVQYCHQKF--- 133
Query: 456 VVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKAT- 514
           +VHRD+K  N+LLD  +N K+ DFG +  +  G   +     G+  Y APEL +  K   
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGN--KLDEFCGSPPYAAPELFQGKKYDG 191
Query: 515 TSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYYDLA 574
              DV+S G+++  +  G    + Q        +  ++E  L G+       + D  +L 
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPFDGQN-------LKELRERVLRGKYRIPFYMSTDCENLL 244
Query: 575 EAELVLN 581
           +  L+LN
Sbjct: 245 KKFLILN 251

>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325

Iteration: 1
 Score = 65.5 bits (158), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 53/203 (26%), Positives = 97/203 (47%), Gaps = 16/203 (7%)
Query: 336 NLVGSGGFGRVY--RGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMS---MGRLRHRNLV 390
            ++G G FG+V+  + +  S   ++   ++   +   +++ V   M    +  + H  +V
Sbjct: 30  KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 89
Query: 391 QLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHE 450
           +LH   + + +L L+ D++  G                  +      L  +A +L +LH 
Sbjct: 90  KLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKF-----YLAELALALDHLH- 143
Query: 451 ECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IYEHGANPQTTHIVGTLGYLAPELTR 509
             +  +++RD+KP NILLD   + KL DFGL+K   +H    +     GT+ Y+APE+  
Sbjct: 144 --SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDH--EKKAYSFCGTVEYMAPEVVN 199
Query: 510 TGKATTSTDVYSYGILMLEVACG 532
               T S D +S+G+LM E+  G
Sbjct: 200 RRGHTQSADWWSFGVLMFEMLTG 222

>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In Complex With Atp Length = 311

Iteration: 1
 Score = 65.5 bits (158), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 65/250 (26%), Positives = 107/250 (42%), Gaps = 19/250 (7%)
Query: 336 NLVGSGGFGRVY--RGLMPSLGLEVAIKRIGHNSQQGMKEFVA-EIMSMGRLRHRNLVQL 392
            ++G G F  V   R L  S    + I    H  ++    +V  E   M RL H   V+L
Sbjct: 38  KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 393 HGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEEC 452
           +   +  ++L     Y  NG                  +         I  +L YLH   
Sbjct: 98  YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-----YTAEIVSALEYLH--- 149
Query: 453 NQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE-HGANPQTTHIVGTLGYLAPELTRTG 511
            + ++HRD+KP NILL+  ++ ++ DFG AK+        +    VGT  Y++PEL    
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 512 KATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYY 571
            A  S+D+++ G ++ ++  G   + P +A  E L+  + K + LE +  +         
Sbjct: 210 SACKSSDLWALGCIIYQLVAG---LPPFRAGNEGLI--FAKIIKLEYDFPEKFFPKAR-- 262
Query: 572 DLAEAELVLN 581
           DL E  LVL+
Sbjct: 263 DLVEKLLVLD 272

>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438

Iteration: 1
 Score = 65.5 bits (158), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 57/216 (26%), Positives = 102/216 (47%), Gaps = 27/216 (12%)
Query: 335 QNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHG 394
           +  +G+G FG V+     +   +VA+K +   S   ++ F+AE   M  L+H  LV+LH 
Sbjct: 187 EKKLGAGQFGEVWMATY-NKHTKVAVKTMKPGSM-SVEAFLAEANVMKTLQHDKLVKLHA 244
Query: 395 WCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIG----IAQSLLYLHE 450
              K+  + ++ +++  GS                   Q    LI     IA+ + ++ +
Sbjct: 245 VVTKEP-IYIITEFMAKGSLLDFLKSDEGSK-------QPLPKLIDFSAQIAEGMAFIEQ 296
Query: 451 ECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRT 510
              +  +HRD++ +NIL+   L  K+ DFGLA++   GA          + + APE    
Sbjct: 297 ---RNYIHRDLRAANILVSASLVCKIADFGLARV---GAK-------FPIKWTAPEAINF 343
Query: 511 GKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELL 546
           G  T  +DV+S+GIL++E+    R   P  +  E++
Sbjct: 344 GSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVI 379

>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase ( Diphosphorylated Form) Bound To 5- Amino-3-((4-( Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 65.5 bits (158), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 53/206 (25%), Positives = 93/206 (45%), Gaps = 17/206 (8%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +G G FG+VY+       +  A K I   S++ +++++ EI  +    H N+V+L     
Sbjct: 45  LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 398 KQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQRVV 457
            ++ L ++ ++   G+                T  Q   +      +L YLH   + +++
Sbjct: 105 YENNLWILIEFCAGGA----VDAVMLELERPLTESQIQVVCKQTLDALNYLH---DNKII 157
Query: 458 HRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPE--LTRTGKATT 515
           HRD+K  NIL     + KL DFG++         +    +GT  ++APE  +  T K   
Sbjct: 158 HRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQ-RRDXFIGTPYWMAPEVVMCETSKDRP 216
Query: 516 ---STDVYSYGILMLEVACGRRSIEP 538
                DV+S GI ++E+A     IEP
Sbjct: 217 YDYKADVWSLGITLIEMA----EIEP 238

>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: T208aS212A INACTIVE DOUBLE MUTANT Length = 327

Iteration: 1
 Score = 65.5 bits (158), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 62/247 (25%), Positives = 101/247 (40%), Gaps = 20/247 (8%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLRHRNLVQLHGW 395
           +G G F +V        G EVA+K I     +   +++   E+  M  L H N+V+L   
Sbjct: 22  IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 396 CRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQR 455
              +  L LV +Y   G                     R      I  ++ Y H++    
Sbjct: 82  IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-----QIVSAVQYCHQKF--- 133
Query: 456 VVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKAT- 514
           +VHRD+K  N+LLD  +N K+ DFG +  +  G   +     G   Y APEL +  K   
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGN--KLDAFCGAPPYAAPELFQGKKYDG 191
Query: 515 TSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYYDLA 574
              DV+S G+++  +  G    + Q        +  ++E  L G+       + D  +L 
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPFDGQN-------LKELRERVLRGKYRIPFYMSTDCENLL 244
Query: 575 EAELVLN 581
           +  L+LN
Sbjct: 245 KKFLILN 251

>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase 32a (Yank1) Length = 384

Iteration: 1
 Score = 65.5 bits (158), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 68/266 (25%), Positives = 111/266 (41%), Gaps = 35/266 (13%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHN---SQQGMKEFVAEIMSMGRLRHRNLVQLHG 394
           +G G FG+V            A+K +       +  ++    E+  M  L H  LV L  
Sbjct: 23  IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNL-- 80
Query: 395 WCRKQDE--LLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILI-GIAQSLLYLHEE 451
           W   QDE  + +V D +  G                   ++  K+ I  +  +L YL   
Sbjct: 81  WYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFK------EETVKLFICELVMALDYLQ-- 132
Query: 452 CNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTG 511
            NQR++HRD+KP NILLD + +  + DF +A +       Q T + GT  Y+APE+  + 
Sbjct: 133 -NQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRET--QITTMAGTKPYMAPEMFSSR 189
Query: 512 KA---TTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTL 568
           K    + + D +S G+   E+  GRR    + + +               EI    + T+
Sbjct: 190 KGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTS-------------SKEIVHTFETTV 236
Query: 569 DYYDLAEAELVLNLGLFCSAPNPVYR 594
             Y  A ++ +++L      PNP  R
Sbjct: 237 VTYPSAWSQEMVSLLKKLLEPNPDQR 262

>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium Tuberculosis Length = 299

Iteration: 1
 Score = 65.5 bits (158), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 5/105 (4%)
Query: 430 TWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGA 489
           T  +  +++    Q+L + H+     ++HRDVKP+NI++      K+ DFG+A+      
Sbjct: 131 TPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSG 187
Query: 490 NP--QTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACG 532
           N   QT  ++GT  YL+PE  R       +DVYS G ++ EV  G
Sbjct: 188 NSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 232

>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Activator Ps171 Bound To The Pif-Pocket Length = 311

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 65/250 (26%), Positives = 107/250 (42%), Gaps = 19/250 (7%)
Query: 336 NLVGSGGFGRVY--RGLMPSLGLEVAIKRIGHNSQQGMKEFVA-EIMSMGRLRHRNLVQL 392
            ++G G F  V   R L  S    + I    H  ++    +V  E   M RL H   V+L
Sbjct: 38  KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 393 HGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEEC 452
           +   +  ++L     Y  NG                  +         I  +L YLH   
Sbjct: 98  YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-----YTAEIVSALEYLH--- 149
Query: 453 NQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE-HGANPQTTHIVGTLGYLAPELTRTG 511
            + ++HRD+KP NILL+  ++ ++ DFG AK+        +    VGT  Y++PEL    
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 512 KATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYY 571
            A  S+D+++ G ++ ++  G   + P +A  E L+  + K + LE +  +         
Sbjct: 210 SAXKSSDLWALGCIIYQLVAG---LPPFRAGNEGLI--FAKIIKLEYDFPEKFFPKAR-- 262
Query: 572 DLAEAELVLN 581
           DL E  LVL+
Sbjct: 263 DLVEKLLVLD 272

>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 53/203 (26%), Positives = 97/203 (47%), Gaps = 16/203 (7%)
Query: 336 NLVGSGGFGRVY--RGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMS---MGRLRHRNLV 390
            ++G G FG+V+  + +  S   ++   ++   +   +++ V   M    +  + H  +V
Sbjct: 31  KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 90
Query: 391 QLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHE 450
           +LH   + + +L L+ D++  G                  +      L  +A +L +LH 
Sbjct: 91  KLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKF-----YLAELALALDHLH- 144
Query: 451 ECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IYEHGANPQTTHIVGTLGYLAPELTR 509
             +  +++RD+KP NILLD   + KL DFGL+K   +H    +     GT+ Y+APE+  
Sbjct: 145 --SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDH--EKKAYSFCGTVEYMAPEVVN 200
Query: 510 TGKATTSTDVYSYGILMLEVACG 532
               T S D +S+G+LM E+  G
Sbjct: 201 RRGHTQSADWWSFGVLMFEMLTG 223

>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 53/203 (26%), Positives = 97/203 (47%), Gaps = 16/203 (7%)
Query: 336 NLVGSGGFGRVY--RGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMS---MGRLRHRNLV 390
            ++G G FG+V+  + +  S   ++   ++   +   +++ V   M    +  + H  +V
Sbjct: 30  KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 89
Query: 391 QLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHE 450
           +LH   + + +L L+ D++  G                  +      L  +A +L +LH 
Sbjct: 90  KLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKF-----YLAELALALDHLH- 143
Query: 451 ECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IYEHGANPQTTHIVGTLGYLAPELTR 509
             +  +++RD+KP NILLD   + KL DFGL+K   +H    +     GT+ Y+APE+  
Sbjct: 144 --SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDH--EKKAYSFCGTVEYMAPEVVN 199
Query: 510 TGKATTSTDVYSYGILMLEVACG 532
               T S D +S+G+LM E+  G
Sbjct: 200 RRGHTQSADWWSFGVLMFEMLTG 222

>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A Pyrrolo-Pyridine Inhibitor Length = 273

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 88/200 (44%), Gaps = 15/200 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVA-EIMSMGRLRHRNLVQLHGWC 396
           +G G +G V   +       VA+K +         E +  EI     L H N+V+ +G  
Sbjct: 15  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYGHR 74
Query: 397 RKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRY--KILIGIAQSLLYLHEECNQ 454
           R+ +   L  +Y   G                    QR+  +++ G+    +YLH     
Sbjct: 75  REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA---QRFFHQLMAGV----VYLH---GI 124
Query: 455 RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQ-TTHIVGTLGYLAPE-LTRTGK 512
            + HRD+KP N+LLD   N K+ DFGLA ++ +    +    + GTL Y+APE L R   
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 513 ATTSTDVYSYGILMLEVACG 532
                DV+S GI++  +  G
Sbjct: 185 HAEPVDVWSCGIVLTAMLAG 204

>pdb|1AVB|A Chain A, Arcelin-1 From Phaseolus Vulgaris L Length = 226

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 68/249 (27%), Positives = 106/249 (42%), Gaps = 35/249 (14%)
Query: 6   ADTTSFLYNGFLHANLSLEGAAYISTSGILTVTN---KSEGLIGHALYPNPLRFKTSNKS 62
           ++  SF    F   NL L+G A +S+ G L +TN     E  +G A Y  P++       
Sbjct: 1   SNDASFNVETFNKTNLILQGDATVSSEGHLLLTNVKGNEEDSMGRAFYSAPIQINDRTID 60
Query: 63  VAIDFRTNFVFSILPKYPDLGGQGLAFIIIST-NRPENCLANQFLGLPNITMSSSTKFST 121
               F TNF F I  K  +    GLAF ++   +RP+  L  ++LGL N T   +     
Sbjct: 61  NLASFSTNFTFRINAKNIENSAYGLAFALVPVGSRPK--LKGRYLGLFNTT---NYDRDA 115
Query: 122 RMLAVEFDIIQNTELIDINDNHVGIDXXXXXXXXXXXXXYYSGNNHRIPILLRSGDPIQA 181
             +AV FD + N   ID+N                     +  NN         G+  + 
Sbjct: 116 HTVAVVFDTVSNRIEIDVN----------SIRPIATESCNFGHNN---------GEKAEV 156
Query: 182 WVDYSSQEMLINVSIC-PLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGL---ITAS 237
            + Y S +  + VS+  P    K +   +S  + L   +++++  GFSA++G     T +
Sbjct: 157 RITYDSPKNDLRVSLLYPSSEEKCH---VSATVPLEKEVEDWVSVGFSATSGSKKETTET 213
Query: 238 HNVHGWSIS 246
           HNV  WS S
Sbjct: 214 HNVLSWSFS 222

>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A Methanesulfonamide Diaminopyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/196 (25%), Positives = 95/196 (48%), Gaps = 12/196 (6%)
Query: 338 VGSGGFGRVYRGLMPSL---GLEVAIKRIGHNSQQGMKE-FVAEIMSMGRLRHRNLVQLH 393
           +G G FG V++G+  S     L VAIK   + +   ++E F+ E ++M +  H ++V+L 
Sbjct: 15  IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 394 GWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECN 453
           G    ++ + ++ +    G                      Y++    + +L YL    +
Sbjct: 75  G-VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQL----STALAYLE---S 126
Query: 454 QRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKA 513
           +R VHRD+   N+L+ +    KLGDFGL++  E     + +     + ++APE     + 
Sbjct: 127 KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRF 186
Query: 514 TTSTDVYSYGILMLEV 529
           T+++DV+ +G+ M E+
Sbjct: 187 TSASDVWMFGVCMWEI 202

>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat Length = 332

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 16/218 (7%)
Query: 319 RFKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMK-EFVAE 377
           R+K AE   +   +  ++++G+G F  V           VAIK I   + +G +     E
Sbjct: 9   RWKQAE--DIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENE 66
Query: 378 IMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKI 437
           I  + +++H N+V L         L L+   V  G                 +     ++
Sbjct: 67  IAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS-----RL 121
Query: 438 LIGIAQSLLYLHEECNQRVVHRDVKPSNIL---LDTYLNAKLGDFGLAKIYEHGANPQTT 494
           +  +  ++ YLH   +  +VHRD+KP N+L   LD      + DFGL+K+ + G+   T 
Sbjct: 122 IFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTA 178
Query: 495 HIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACG 532
              GT GY+APE+      + + D +S G++   + CG
Sbjct: 179 --CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214

>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And Kinase Domains Of Focal Adhesion Kinase. Length = 276

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/196 (25%), Positives = 95/196 (48%), Gaps = 12/196 (6%)
Query: 338 VGSGGFGRVYRGLMPSL---GLEVAIKRIGHNSQQGMKE-FVAEIMSMGRLRHRNLVQLH 393
           +G G FG V++G+  S     L VAIK   + +   ++E F+ E ++M +  H ++V+L 
Sbjct: 18  IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 394 GWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECN 453
           G    ++ + ++ +    G                      Y++    + +L YL    +
Sbjct: 78  G-VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQL----STALAYLE---S 129
Query: 454 QRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKA 513
           +R VHRD+   N+L+ +    KLGDFGL++  E     + +     + ++APE     + 
Sbjct: 130 KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRF 189
Query: 514 TTSTDVYSYGILMLEV 529
           T+++DV+ +G+ M E+
Sbjct: 190 TSASDVWMFGVCMWEI 205

>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017 Length = 268

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 90/200 (45%), Gaps = 15/200 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGR-LRHRNLVQLHGWC 396
           +G G +G V   +       VA+K +         E + + + + + L H N+V+ +G  
Sbjct: 14  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 397 RKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRY--KILIGIAQSLLYLHEECNQ 454
           R+ +   L  +Y   G                    QR+  +++ G+    +YLH     
Sbjct: 74  REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA---QRFFHQLMAGV----VYLH---GI 123
Query: 455 RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQ-TTHIVGTLGYLAPE-LTRTGK 512
            + HRD+KP N+LLD   N K+ DFGLA ++ +    +    + GTL Y+APE L R   
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 513 ATTSTDVYSYGILMLEVACG 532
                DV+S GI++  +  G
Sbjct: 184 HAEPVDVWSCGIVLTAMLAG 203

>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor Length = 269

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 90/200 (45%), Gaps = 15/200 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGR-LRHRNLVQLHGWC 396
           +G G +G V   +       VA+K +         E + + + + + L H N+V+ +G  
Sbjct: 15  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 397 RKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRY--KILIGIAQSLLYLHEECNQ 454
           R+ +   L  +Y   G                    QR+  +++ G+    +YLH     
Sbjct: 75  REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA---QRFFHQLMAGV----VYLH---GI 124
Query: 455 RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQ-TTHIVGTLGYLAPE-LTRTGK 512
            + HRD+KP N+LLD   N K+ DFGLA ++ +    +    + GTL Y+APE L R   
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 513 ATTSTDVYSYGILMLEVACG 532
                DV+S GI++  +  G
Sbjct: 185 HAEPVDVWSCGIVLTAMLAG 204

>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 90/200 (45%), Gaps = 15/200 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGR-LRHRNLVQLHGWC 396
           +G G +G V   +       VA+K +         E + + + + + L H N+V+ +G  
Sbjct: 14  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 397 RKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRY--KILIGIAQSLLYLHEECNQ 454
           R+ +   L  +Y   G                    QR+  +++ G+    +YLH     
Sbjct: 74  REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA---QRFFHQLMAGV----VYLH---GI 123
Query: 455 RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQ-TTHIVGTLGYLAPE-LTRTGK 512
            + HRD+KP N+LLD   N K+ DFGLA ++ +    +    + GTL Y+APE L R   
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 513 ATTSTDVYSYGILMLEVACG 532
                DV+S GI++  +  G
Sbjct: 184 HAEPVDVWSCGIVLTAMLAG 203

>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In Complex With Novel Allosteric Inhibitor Length = 304

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/196 (25%), Positives = 95/196 (48%), Gaps = 12/196 (6%)
Query: 338 VGSGGFGRVYRGLMPSL---GLEVAIKRIGHNSQQGMKE-FVAEIMSMGRLRHRNLVQLH 393
           +G G FG V++G+  S     L VAIK   + +   ++E F+ E ++M +  H ++V+L 
Sbjct: 46  IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 394 GWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECN 453
           G    ++ + ++ +    G                      Y++    + +L YL    +
Sbjct: 106 G-VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQL----STALAYLE---S 157
Query: 454 QRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKA 513
           +R VHRD+   N+L+ +    KLGDFGL++  E     + +     + ++APE     + 
Sbjct: 158 KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRF 217
Query: 514 TTSTDVYSYGILMLEV 529
           T+++DV+ +G+ M E+
Sbjct: 218 TSASDVWMFGVCMWEI 233

>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex With Amp-Pnp Length = 344

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 103/229 (44%), Gaps = 41/229 (17%)
Query: 317 ARRFKYAELASVTKGFGEQNLVGSGGFGRVYRGL-MP---SLGLEVAIKRIGHNS-QQGM 371
           AR FK  EL  +        ++GSG FG V++G+ +P   S+ + V IK I   S +Q  
Sbjct: 25  ARIFKETELRKL-------KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSF 77
Query: 372 KEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXX--XXXX 429
           +     ++++G L H ++V+L G C     L LV  Y+P GS                  
Sbjct: 78  QAVTDHMLAIGSLDHAHIVRLLGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLL 136
Query: 430 TWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK------ 483
            W       + IA+ + YL E     +VHR++   N+LL +    ++ DFG+A       
Sbjct: 137 NWG------VQIAKGMYYLEE---HGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDD 187
Query: 484 ---IYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEV 529
              +Y     P        + ++A E    GK T  +DV+SYG+ + E+
Sbjct: 188 KQLLYSEAKTP--------IKWMALESIHFGKYTHQSDVWSYGVTVWEL 228

>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994 Length = 269

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 90/200 (45%), Gaps = 15/200 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGR-LRHRNLVQLHGWC 396
           +G G +G V   +       VA+K +         E + + + + + L H N+V+ +G  
Sbjct: 14  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 397 RKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRY--KILIGIAQSLLYLHEECNQ 454
           R+ +   L  +Y   G                    QR+  +++ G+    +YLH     
Sbjct: 74  REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA---QRFFHQLMAGV----VYLH---GI 123
Query: 455 RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQ-TTHIVGTLGYLAPE-LTRTGK 512
            + HRD+KP N+LLD   N K+ DFGLA ++ +    +    + GTL Y+APE L R   
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 513 ATTSTDVYSYGILMLEVACG 532
                DV+S GI++  +  G
Sbjct: 184 HAEPVDVWSCGIVLTAMLAG 203

>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin E804 Length = 313

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/194 (28%), Positives = 85/194 (43%), Gaps = 14/194 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLRHRNLVQLHGW 395
           +G G F  V R +    G E A K I     S +  ++   E      L+H N+V+LH  
Sbjct: 30  LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 89
Query: 396 CRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQR 455
             ++    L++D V  G                 +       +  I +++L+ H+     
Sbjct: 90  ISEEGHHYLIFDLVTGGELFEDIVAREYYSEADAS-----HCIQQILEAVLHCHQ---MG 141
Query: 456 VVHRDVKPSNILLDTYLNA---KLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGK 512
           VVHRD+KP N+LL + L     KL DFGLA I   G         GT GYL+PE+ R   
Sbjct: 142 VVHRDLKPENLLLASKLKGAAVKLADFGLA-IEVEGEQQAWFGFAGTPGYLSPEVLRKDP 200
Query: 513 ATTSTDVYSYGILM 526
                D+++ G+++
Sbjct: 201 YGKPVDLWACGVIL 214

>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative Length = 281

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/196 (25%), Positives = 95/196 (48%), Gaps = 12/196 (6%)
Query: 338 VGSGGFGRVYRGLMPSL---GLEVAIKRIGHNSQQGMKE-FVAEIMSMGRLRHRNLVQLH 393
           +G G FG V++G+  S     L VAIK   + +   ++E F+ E ++M +  H ++V+L 
Sbjct: 20  IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 394 GWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECN 453
           G    ++ + ++ +    G                      Y++    + +L YL    +
Sbjct: 80  G-VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQL----STALAYLE---S 131
Query: 454 QRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKA 513
           +R VHRD+   N+L+ +    KLGDFGL++  E     + +     + ++APE     + 
Sbjct: 132 KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRF 191
Query: 514 TTSTDVYSYGILMLEV 529
           T+++DV+ +G+ M E+
Sbjct: 192 TSASDVWMFGVCMWEI 207

>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint Kinase Inhibitors - Hit To Lead Exploration Length = 276

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 90/200 (45%), Gaps = 15/200 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGR-LRHRNLVQLHGWC 396
           +G G +G V   +       VA+K +         E + + + + + L H N+V+ +G  
Sbjct: 15  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 397 RKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRY--KILIGIAQSLLYLHEECNQ 454
           R+ +   L  +Y   G                    QR+  +++ G+    +YLH     
Sbjct: 75  REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA---QRFFHQLMAGV----VYLH---GI 124
Query: 455 RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQ-TTHIVGTLGYLAPE-LTRTGK 512
            + HRD+KP N+LLD   N K+ DFGLA ++ +    +    + GTL Y+APE L R   
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 513 ATTSTDVYSYGILMLEVACG 532
                DV+S GI++  +  G
Sbjct: 185 HAEPVDVWSCGIVLTAMLAG 204

>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide Inhibitor Length = 333

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 61/214 (28%), Positives = 95/214 (44%), Gaps = 30/214 (14%)
Query: 338 VGSGGFGRVYRGLMPSLG-----LEVAIKRIGHNSQQGMKE-FVAEIMSMGRL-RHRNLV 390
           +G+G FG+V       LG     L+VA+K +   +    KE  ++E+  M  L +H N+V
Sbjct: 54  LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 391 QLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQS--LLYL 448
            L G C     +L++ +Y   G                   D  + I    A +  LL+ 
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLET----DPAFAIANSTASTRDLLHF 169
Query: 449 HEECNQ--------RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVG-- 498
             +  Q          +HRDV   N+LL     AK+GDFGLA+   + +N    +IV   
Sbjct: 170 SSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN----YIVKGN 225
Query: 499 ---TLGYLAPELTRTGKATTSTDVYSYGILMLEV 529
               + ++APE       T  +DV+SYGIL+ E+
Sbjct: 226 ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI 259

>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak) Length = 281

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/196 (25%), Positives = 95/196 (48%), Gaps = 12/196 (6%)
Query: 338 VGSGGFGRVYRGLMPSL---GLEVAIKRIGHNSQQGMKE-FVAEIMSMGRLRHRNLVQLH 393
           +G G FG V++G+  S     L VAIK   + +   ++E F+ E ++M +  H ++V+L 
Sbjct: 23  IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 394 GWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECN 453
           G    ++ + ++ +    G                      Y++    + +L YL    +
Sbjct: 83  G-VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQL----STALAYLE---S 134
Query: 454 QRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKA 513
           +R VHRD+   N+L+ +    KLGDFGL++  E     + +     + ++APE     + 
Sbjct: 135 KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRF 194
Query: 514 TTSTDVYSYGILMLEV 529
           T+++DV+ +G+ M E+
Sbjct: 195 TSASDVWMFGVCMWEI 210

>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1 Length = 278

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 90/200 (45%), Gaps = 15/200 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGR-LRHRNLVQLHGWC 396
           +G G +G V   +       VA+K +         E + + + + + L H N+V+ +G  
Sbjct: 13  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 72
Query: 397 RKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRY--KILIGIAQSLLYLHEECNQ 454
           R+ +   L  +Y   G                    QR+  +++ G+    +YLH     
Sbjct: 73  REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA---QRFFHQLMAGV----VYLH---GI 122
Query: 455 RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQ-TTHIVGTLGYLAPE-LTRTGK 512
            + HRD+KP N+LLD   N K+ DFGLA ++ +    +    + GTL Y+APE L R   
Sbjct: 123 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 182
Query: 513 ATTSTDVYSYGILMLEVACG 532
                DV+S GI++  +  G
Sbjct: 183 HAEPVDVWSCGIVLTAMLAG 202

>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human Chk1 Kinase Domain Length = 273

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 90/200 (45%), Gaps = 15/200 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGR-LRHRNLVQLHGWC 396
           +G G +G V   +       VA+K +         E + + + + + L H N+V+ +G  
Sbjct: 14  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 397 RKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRY--KILIGIAQSLLYLHEECNQ 454
           R+ +   L  +Y   G                    QR+  +++ G+    +YLH     
Sbjct: 74  REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA---QRFFHQLMAGV----VYLH---GI 123
Query: 455 RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQ-TTHIVGTLGYLAPE-LTRTGK 512
            + HRD+KP N+LLD   N K+ DFGLA ++ +    +    + GTL Y+APE L R   
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 513 ATTSTDVYSYGILMLEVACG 532
                DV+S GI++  +  G
Sbjct: 184 HAEPVDVWSCGIVLTAMLAG 203

>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb Length = 351

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 66/257 (25%), Positives = 111/257 (43%), Gaps = 28/257 (10%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRI-GHNSQQGMK-EFVAEIMSMGRLRHRNLVQLHGW 395
           +G G FG V++      G +VA+K++   N ++G     + EI  +  L+H N+V L   
Sbjct: 25  IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 84
Query: 396 CRKQ--------DELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
           CR +          + LV+D+  +                  T  +  +++  +   L Y
Sbjct: 85  CRTKASPYNRCKGSIYLVFDFCEHD-----LAGLLSNVLVKFTLSEIKRVMQMLLNGLYY 139
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHI---VGTLGYLA 504
           +H     +++HRD+K +N+L+      KL DFGLA+ +    N Q       V TL Y  
Sbjct: 140 IHR---NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRP 196
Query: 505 PELTRTGKAT-TSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQA 563
           PEL    +      D++  G +M E+      ++      +L L+       L G IT  
Sbjct: 197 PELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALIS-----QLCGSITPE 251
Query: 564 IDQTLDYYDLAEA-ELV 579
           +   +D Y+L E  ELV
Sbjct: 252 VWPNVDNYELYEKLELV 268

>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase Iib Isoform 1 (camk2b) Length = 295

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 57/205 (27%), Positives = 88/205 (42%), Gaps = 14/205 (6%)
Query: 327 SVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRL 384
           S+T  +     +G G F  V R +    G E A K I     S +  ++   E      L
Sbjct: 1   SMTDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLL 60
Query: 385 RHRNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQS 444
           +H N+V+LH    ++    LV+D V  G                 +       +  I ++
Sbjct: 61  KHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADAS-----HCIQQILEA 115
Query: 445 LLYLHEECNQRVVHRDVKPSNILLDTYLNA---KLGDFGLAKIYEHGANPQTTHIVGTLG 501
           +L+ H+     VVHRD+KP N+LL +       KL DFGLA I   G         GT G
Sbjct: 116 VLHCHQ---MGVVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGDQQAWFGFAGTPG 171
Query: 502 YLAPELTRTGKATTSTDVYSYGILM 526
           YL+PE+ R        D+++ G+++
Sbjct: 172 YLSPEVLRKEAYGKPVDIWACGVIL 196

>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And Drb Length = 373

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 66/257 (25%), Positives = 111/257 (43%), Gaps = 28/257 (10%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRI-GHNSQQGMK-EFVAEIMSMGRLRHRNLVQLHGW 395
           +G G FG V++      G +VA+K++   N ++G     + EI  +  L+H N+V L   
Sbjct: 26  IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 396 CRKQ--------DELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
           CR +          + LV+D+  +                  T  +  +++  +   L Y
Sbjct: 86  CRTKASPYNRCKGSIYLVFDFCEHD-----LAGLLSNVLVKFTLSEIKRVMQMLLNGLYY 140
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHI---VGTLGYLA 504
           +H     +++HRD+K +N+L+      KL DFGLA+ +    N Q       V TL Y  
Sbjct: 141 IHR---NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRP 197
Query: 505 PELTRTGKAT-TSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQA 563
           PEL    +      D++  G +M E+      ++      +L L+       L G IT  
Sbjct: 198 PELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALIS-----QLCGSITPE 252
Query: 564 IDQTLDYYDLAEA-ELV 579
           +   +D Y+L E  ELV
Sbjct: 253 VWPNVDNYELYEKLELV 269

>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20 Length = 322

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 90/200 (45%), Gaps = 15/200 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGR-LRHRNLVQLHGWC 396
           +G G +G V   +       VA+K +         E + + + + + L H N+V+ +G  
Sbjct: 14  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 397 RKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRY--KILIGIAQSLLYLHEECNQ 454
           R+ +   L  +Y   G                    QR+  +++ G+    +YLH     
Sbjct: 74  REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA---QRFFHQLMAGV----VYLH---GI 123
Query: 455 RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQ-TTHIVGTLGYLAPE-LTRTGK 512
            + HRD+KP N+LLD   N K+ DFGLA ++ +    +    + GTL Y+APE L R   
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 513 ATTSTDVYSYGILMLEVACG 532
                DV+S GI++  +  G
Sbjct: 184 HAEPVDVWSCGIVLTAMLAG 203

>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase Domain Of The Human Epidermal Growth Factor Receptor 3 (Her3) Length = 325

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 103/229 (44%), Gaps = 41/229 (17%)
Query: 317 ARRFKYAELASVTKGFGEQNLVGSGGFGRVYRGL-MP---SLGLEVAIKRIGHNS-QQGM 371
           AR FK  EL  +        ++GSG FG V++G+ +P   S+ + V IK I   S +Q  
Sbjct: 7   ARIFKETELRKL-------KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSF 59
Query: 372 KEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXX--XXXX 429
           +     ++++G L H ++V+L G C     L LV  Y+P GS                  
Sbjct: 60  QAVTDHMLAIGSLDHAHIVRLLGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLL 118
Query: 430 TWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK------ 483
            W       + IA+ + YL E     +VHR++   N+LL +    ++ DFG+A       
Sbjct: 119 NWG------VQIAKGMYYLEE---HGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDD 169
Query: 484 ---IYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEV 529
              +Y     P        + ++A E    GK T  +DV+SYG+ + E+
Sbjct: 170 KQLLYSEAKTP--------IKWMALESIHFGKYTHQSDVWSYGVTVWEL 210

>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding Site Length = 271

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 90/200 (45%), Gaps = 15/200 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGR-LRHRNLVQLHGWC 396
           +G G +G V   +       VA+K +         E + + + + + L H N+V+ +G  
Sbjct: 14  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 397 RKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRY--KILIGIAQSLLYLHEECNQ 454
           R+ +   L  +Y   G                    QR+  +++ G+    +YLH     
Sbjct: 74  REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA---QRFFHQLMAGV----VYLH---GI 123
Query: 455 RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQ-TTHIVGTLGYLAPE-LTRTGK 512
            + HRD+KP N+LLD   N K+ DFGLA ++ +    +    + GTL Y+APE L R   
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 513 ATTSTDVYSYGILMLEVACG 532
                DV+S GI++  +  G
Sbjct: 184 HAEPVDVWSCGIVLTAMLAG 203

>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/226 (24%), Positives = 97/226 (42%), Gaps = 15/226 (6%)
Query: 336 NLVGSGGFGR--VYRGLMPSLGLEVAIKRIGHNSQQGMKEFVA-EIMSMGRLRHRNLVQL 392
            ++G G F    + R L  S    + I    H  ++    +V  E   M RL H   V+L
Sbjct: 36  KILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 95
Query: 393 HGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEEC 452
           +   +  ++L     Y  NG                  +         I  +L YLH   
Sbjct: 96  YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-----YTAEIVSALEYLH--- 147
Query: 453 NQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE-HGANPQTTHIVGTLGYLAPELTRTG 511
            + ++HRD+KP NILL+  ++ ++ DFG AK+        +    VGT  Y++PEL    
Sbjct: 148 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 207
Query: 512 KATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLE 557
            A  S+D+++ G ++ ++  G   + P +A  E L+   + +L  +
Sbjct: 208 SACKSSDLWALGCIIYQLVAG---LPPFRAGNEYLIFQKIIKLEYD 250

>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/203 (24%), Positives = 98/203 (48%), Gaps = 26/203 (12%)
Query: 338 VGSGGFGRVYRGLMPSL---GLEVAIKRIGHNSQQGMKE-FVAEIMSMGRLRHRNLVQLH 393
           +G G FG V++G+  S     + VAIK   + +   ++E F+ E ++M +  H ++V+L 
Sbjct: 18  IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 394 GWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEEC- 452
           G    ++ + ++ +    G                 ++ Q  K  + +A  +LY ++   
Sbjct: 78  G-VITENPVWIIMELCTLGELR--------------SFLQVRKFSLDLASLILYAYQLST 122
Query: 453 ------NQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPE 506
                 ++R VHRD+   N+L+      KLGDFGL++  E     + +     + ++APE
Sbjct: 123 ALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 182
Query: 507 LTRTGKATTSTDVYSYGILMLEV 529
                + T+++DV+ +G+ M E+
Sbjct: 183 SINFRRFTSASDVWMFGVCMWEI 205

>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase 1d Length = 334

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 52/209 (24%), Positives = 89/209 (42%), Gaps = 14/209 (6%)
Query: 328 VTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVA-EIMSMGRLRH 386
           + K F  +  +G+G F  V      + G   A+K I   + +G +  +  EI  + +++H
Sbjct: 20  IKKIFEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKH 79
Query: 387 RNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLL 446
            N+V L       + L LV   V  G                 +      ++  +  ++ 
Sbjct: 80  ENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDAS-----TLIRQVLDAVY 134
Query: 447 YLHEECNQRVVHRDVKPSNILL---DTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYL 503
           YLH      +VHRD+KP N+L    D      + DFGL+K+   G     +   GT GY+
Sbjct: 135 YLH---RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKM--EGKGDVMSTACGTPGYV 189
Query: 504 APELTRTGKATTSTDVYSYGILMLEVACG 532
           APE+      + + D +S G++   + CG
Sbjct: 190 APEVLAQKPYSKAVDCWSIGVIAYILLCG 218

>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 331

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 66/257 (25%), Positives = 111/257 (43%), Gaps = 28/257 (10%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRI-GHNSQQGMK-EFVAEIMSMGRLRHRNLVQLHGW 395
           +G G FG V++      G +VA+K++   N ++G     + EI  +  L+H N+V L   
Sbjct: 26  IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 396 CRKQDE--------LLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
           CR +          + LV+D+  +                  T  +  +++  +   L Y
Sbjct: 86  CRTKASPYNRCKASIYLVFDFCEHD-----LAGLLSNVLVKFTLSEIKRVMQMLLNGLYY 140
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHI---VGTLGYLA 504
           +H     +++HRD+K +N+L+      KL DFGLA+ +    N Q       V TL Y  
Sbjct: 141 IHR---NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRP 197
Query: 505 PELTRTGKAT-TSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQA 563
           PEL    +      D++  G +M E+      ++      +L L+       L G IT  
Sbjct: 198 PELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALIS-----QLCGSITPE 252
Query: 564 IDQTLDYYDLAEA-ELV 579
           +   +D Y+L E  ELV
Sbjct: 253 VWPNVDNYELYEKLELV 269

>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54 Length = 323

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 90/200 (45%), Gaps = 15/200 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGR-LRHRNLVQLHGWC 396
           +G G +G V   +       VA+K +         E + + + + + L H N+V+ +G  
Sbjct: 15  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 397 RKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRY--KILIGIAQSLLYLHEECNQ 454
           R+ +   L  +Y   G                    QR+  +++ G+    +YLH     
Sbjct: 75  REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA---QRFFHQLMAGV----VYLH---GI 124
Query: 455 RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQ-TTHIVGTLGYLAPE-LTRTGK 512
            + HRD+KP N+LLD   N K+ DFGLA ++ +    +    + GTL Y+APE L R   
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 513 ATTSTDVYSYGILMLEVACG 532
                DV+S GI++  +  G
Sbjct: 185 HAEPVDVWSCGIVLTAMLAG 204

>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase Domain Length = 317

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 95/211 (45%), Gaps = 28/211 (13%)
Query: 338 VGSGGFGRVYRGLMPSLG-----LEVAIKRIGHNSQQGMKE-FVAEIMSMGRL-RHRNLV 390
           +G+G FG+V       LG     L+VA+K +   +    KE  ++E+  M  L +H N+V
Sbjct: 46  LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 105
Query: 391 QLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQR-------YKILIGIAQ 443
            L G C     +L++ +Y   G                   D R             +AQ
Sbjct: 106 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKE--DGRPLELRDLLHFSSQVAQ 163
Query: 444 SLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVG----- 498
            + +L    ++  +HRDV   N+LL     AK+GDFGLA+   + +N    +IV      
Sbjct: 164 GMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN----YIVKGNARL 216
Query: 499 TLGYLAPELTRTGKATTSTDVYSYGILMLEV 529
            + ++APE       T  +DV+SYGIL+ E+
Sbjct: 217 PVKWMAPESIFDCVYTVQSDVWSYGILLWEI 247

>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 90/200 (45%), Gaps = 15/200 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGR-LRHRNLVQLHGWC 396
           +G G +G V   +       VA+K +         E + + + + + L H N+V+ +G  
Sbjct: 14  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 73
Query: 397 RKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRY--KILIGIAQSLLYLHEECNQ 454
           R+ +   L  +Y   G                    QR+  +++ G+    +YLH     
Sbjct: 74  REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA---QRFFHQLMAGV----VYLH---GI 123
Query: 455 RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQ-TTHIVGTLGYLAPE-LTRTGK 512
            + HRD+KP N+LLD   N K+ DFGLA ++ +    +    + GTL Y+APE L R   
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 513 ATTSTDVYSYGILMLEVACG 532
                DV+S GI++  +  G
Sbjct: 184 HAEPVDVWSCGIVLTAMLAG 203

>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights Into Hydrogen Bonding And Protein-Ligand Affinity Length = 297

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 90/200 (45%), Gaps = 15/200 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGR-LRHRNLVQLHGWC 396
           +G G +G V   +       VA+K +         E + + + + + L H N+V+ +G  
Sbjct: 15  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 397 RKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRY--KILIGIAQSLLYLHEECNQ 454
           R+ +   L  +Y   G                    QR+  +++ G+    +YLH     
Sbjct: 75  REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA---QRFFHQLMAGV----VYLH---GI 124
Query: 455 RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQ-TTHIVGTLGYLAPE-LTRTGK 512
            + HRD+KP N+LLD   N K+ DFGLA ++ +    +    + GTL Y+APE L R   
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 513 ATTSTDVYSYGILMLEVACG 532
                DV+S GI++  +  G
Sbjct: 185 HAEPVDVWSCGIVLTAMLAG 204

>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And Unphosphorylated Kinase Domains Of The Cdc42-Associated Tyrosine Kinase Ack1 Bound To Amp-Pcp Length = 291

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/218 (27%), Positives = 101/218 (46%), Gaps = 21/218 (9%)
Query: 325 LASVTKGFGEQNL-----VGSGGFGRVYRGLM--PS-LGLEVAIKRIGHN---SQQGMKE 373
           L S+T   GE++L     +G G FG V RG    PS   + VA+K +  +     + M +
Sbjct: 8   LQSLTCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDD 67
Query: 374 FVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQ 433
           F+ E+ +M  L HRNL++L+G       + +V +  P GS                    
Sbjct: 68  FIREVNAMHSLDHRNLIRLYG-VVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTL--S 124
Query: 434 RYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQT 493
           RY +   +A+ + YL    ++R +HRD+   N+LL T    K+GDFGL +      +   
Sbjct: 125 RYAV--QVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXV 179
Query: 494 --THIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEV 529
              H      + APE  +T   + ++D + +G+ + E+
Sbjct: 180 MQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEM 217

>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint Kinase Chk1 Length = 289

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 90/200 (45%), Gaps = 15/200 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGR-LRHRNLVQLHGWC 396
           +G G +G V   +       VA+K +         E + + + + + L H N+V+ +G  
Sbjct: 15  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 397 RKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRY--KILIGIAQSLLYLHEECNQ 454
           R+ +   L  +Y   G                    QR+  +++ G+    +YLH     
Sbjct: 75  REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA---QRFFHQLMAGV----VYLH---GI 124
Query: 455 RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQ-TTHIVGTLGYLAPE-LTRTGK 512
            + HRD+KP N+LLD   N K+ DFGLA ++ +    +    + GTL Y+APE L R   
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 513 ATTSTDVYSYGILMLEVACG 532
                DV+S GI++  +  G
Sbjct: 185 HAEPVDVWSCGIVLTAMLAG 204

>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 Length = 331

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 66/257 (25%), Positives = 111/257 (43%), Gaps = 28/257 (10%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRI-GHNSQQGMK-EFVAEIMSMGRLRHRNLVQLHGW 395
           +G G FG V++      G +VA+K++   N ++G     + EI  +  L+H N+V L   
Sbjct: 26  IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 396 CRKQ--------DELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
           CR +          + LV+D+  +                  T  +  +++  +   L Y
Sbjct: 86  CRTKASPYNRCKGSIYLVFDFCEHD-----LAGLLSNVLVKFTLSEIKRVMQMLLNGLYY 140
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHI---VGTLGYLA 504
           +H     +++HRD+K +N+L+      KL DFGLA+ +    N Q       V TL Y  
Sbjct: 141 IHR---NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRP 197
Query: 505 PELTRTGKAT-TSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQA 563
           PEL    +      D++  G +M E+      ++      +L L+       L G IT  
Sbjct: 198 PELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALIS-----QLCGSITPE 252
Query: 564 IDQTLDYYDLAEA-ELV 579
           +   +D Y+L E  ELV
Sbjct: 253 VWPNVDNYELYEKLELV 269

>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine Analog Length = 295

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 90/200 (45%), Gaps = 15/200 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGR-LRHRNLVQLHGWC 396
           +G G +G V   +       VA+K +         E + + + + + L H N+V+ +G  
Sbjct: 15  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 397 RKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRY--KILIGIAQSLLYLHEECNQ 454
           R+ +   L  +Y   G                    QR+  +++ G+    +YLH     
Sbjct: 75  REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA---QRFFHQLMAGV----VYLH---GI 124
Query: 455 RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQ-TTHIVGTLGYLAPE-LTRTGK 512
            + HRD+KP N+LLD   N K+ DFGLA ++ +    +    + GTL Y+APE L R   
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 513 ATTSTDVYSYGILMLEVACG 532
                DV+S GI++  +  G
Sbjct: 185 HAEPVDVWSCGIVLTAMLAG 204

>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Pyrrolo[2,3- D]thiazole Length = 282

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/196 (25%), Positives = 95/196 (48%), Gaps = 12/196 (6%)
Query: 338 VGSGGFGRVYRGLMPSL---GLEVAIKRIGHNSQQGMKE-FVAEIMSMGRLRHRNLVQLH 393
           +G G FG V++G+  S     L VAIK   + +   ++E F+ E ++M +  H ++V+L 
Sbjct: 21  IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 394 GWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECN 453
           G    ++ + ++ +    G                      Y++    + +L YL    +
Sbjct: 81  G-VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQL----STALAYLE---S 132
Query: 454 QRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKA 513
           +R VHRD+   N+L+ +    KLGDFGL++  E     + +     + ++APE     + 
Sbjct: 133 KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRF 192
Query: 514 TTSTDVYSYGILMLEV 529
           T+++DV+ +G+ M E+
Sbjct: 193 TSASDVWMFGVCMWEI 208

>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420 Length = 504

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 72/289 (24%), Positives = 114/289 (39%), Gaps = 42/289 (14%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRI-------------GHNSQQGMKEFVAEIMSMGRL 384
           +GSG +G V      +   E AIK I               N ++  +E   EI  +  L
Sbjct: 44  LGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL 103
Query: 385 RHRNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQS 444
            H N+++L      +    LV ++   G                        I+  I   
Sbjct: 104 DHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAA-----NIMKQILSG 158
Query: 445 LLYLHEECNQRVVHRDVKPSNILLD---TYLNAKLGDFGLAKIYEHGANPQTTHIVGTLG 501
           + YLH+     +VHRD+KP NILL+   + LN K+ DFGL+  +    + +    +GT  
Sbjct: 159 ICYLHK---HNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFF--SKDYKLRDRLGTAY 213
Query: 502 YLAPELTRTGKATTSTDVYSYGILMLEVACGR------------RSIEPQKAAAELLLVD 549
           Y+APE+ +  K     DV+S G++M  + CG             + +E  K   +    D
Sbjct: 214 YIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFD--FND 270
Query: 550 WVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMR 598
           W K +  E +    +  T DY     AE  LN        N + + D +
Sbjct: 271 W-KNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYANNINKSDQK 318

>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical Protein Kinase C-Iota Length = 364

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/150 (32%), Positives = 70/150 (46%), Gaps = 13/150 (8%)
Query: 386 HRNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSL 445
           H  LV LH   + +  L  V +YV  G                  +   Y   I +A  L
Sbjct: 80  HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF---YSAEISLA--L 134
Query: 446 LYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANP--QTTHIVGTLGYL 503
            YLHE   + +++RD+K  N+LLD+  + KL D+G+ K    G  P   T+   GT  Y+
Sbjct: 135 NYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCK---EGLRPGDTTSXFCGTPNYI 188
Query: 504 APELTRTGKATTSTDVYSYGILMLEVACGR 533
           APE+ R      S D ++ G+LM E+  GR
Sbjct: 189 APEILRGEDYGFSVDWWALGVLMFEMMAGR 218

>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of The Tyrosine Kinase Ack1 Length = 291

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/218 (27%), Positives = 101/218 (46%), Gaps = 21/218 (9%)
Query: 325 LASVTKGFGEQNL-----VGSGGFGRVYRGLM--PS-LGLEVAIKRIGHN---SQQGMKE 373
           L S+T   GE++L     +G G FG V RG    PS   + VA+K +  +     + M +
Sbjct: 8   LQSLTCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDD 67
Query: 374 FVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQ 433
           F+ E+ +M  L HRNL++L+G       + +V +  P GS                    
Sbjct: 68  FIREVNAMHSLDHRNLIRLYG-VVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTL--S 124
Query: 434 RYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANP-- 491
           RY +   +A+ + YL    ++R +HRD+   N+LL T    K+GDFGL +      +   
Sbjct: 125 RYAV--QVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYV 179
Query: 492 QTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEV 529
              H      + APE  +T   + ++D + +G+ + E+
Sbjct: 180 MQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEM 217

>pdb|4FST|A Chain A, Crystal Structure Of The Chk1 Length = 269

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 90/200 (45%), Gaps = 15/200 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGR-LRHRNLVQLHGWC 396
           +G G +G V   +       VA+K +         E + + + + + L H N+V+ +G  
Sbjct: 14  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 397 RKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRY--KILIGIAQSLLYLHEECNQ 454
           R+ +   L  +Y   G                    QR+  +++ G+    +YLH     
Sbjct: 74  REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA---QRFFHQLMAGV----VYLH---GI 123
Query: 455 RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQ-TTHIVGTLGYLAPE-LTRTGK 512
            + HRD+KP N+LLD   N K+ DFGLA ++ +    +    + GTL Y+APE L R   
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 513 ATTSTDVYSYGILMLEVACG 532
                DV+S GI++  +  G
Sbjct: 184 HAEPVDVWSCGIVLTAMLAG 203

>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor Length = 349

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/154 (31%), Positives = 71/154 (46%), Gaps = 13/154 (8%)
Query: 386 HRNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSL 445
           H  LV LH   + +  L  V +YV  G                  +   Y   I +A  L
Sbjct: 65  HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF---YSAEISLA--L 119
Query: 446 LYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANP--QTTHIVGTLGYL 503
            YLHE   + +++RD+K  N+LLD+  + KL D+G+ K    G  P   T+   GT  Y+
Sbjct: 120 NYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCK---EGLRPGDTTSXFCGTPNYI 173
Query: 504 APELTRTGKATTSTDVYSYGILMLEVACGRRSIE 537
           APE+ R      S D ++ G+LM E+  GR   +
Sbjct: 174 APEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 207

>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 90/200 (45%), Gaps = 15/200 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGR-LRHRNLVQLHGWC 396
           +G G +G V   +       VA+K +         E + + + + + L H N+V+ +G  
Sbjct: 14  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 397 RKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRY--KILIGIAQSLLYLHEECNQ 454
           R+ +   L  +Y   G                    QR+  +++ G+    +YLH     
Sbjct: 74  REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA---QRFFHQLMAGV----VYLH---GI 123
Query: 455 RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQ-TTHIVGTLGYLAPE-LTRTGK 512
            + HRD+KP N+LLD   N K+ DFGLA ++ +    +    + GTL Y+APE L R   
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 513 ATTSTDVYSYGILMLEVACG 532
                DV+S GI++  +  G
Sbjct: 184 HAEPVDVWSCGIVLTAMLAG 203

>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536 Length = 294

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 93/205 (45%), Gaps = 14/205 (6%)
Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS---QQGMKEFVAEIMSMGR-LRHRNLVQL 392
            +G GGF + +  +  +   EV   +I   S   +   +E ++  +S+ R L H+++V  
Sbjct: 22  FLGKGGFAKCFE-ISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF 80
Query: 393 HGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEEC 452
           HG+    D + +V +     S                 +  R +I++G      YLH   
Sbjct: 81  HGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-QIVLGCQ----YLH--- 132
Query: 453 NQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGK 512
             RV+HRD+K  N+ L+  L  K+GDFGLA   E+    +   + GT  Y+APE+     
Sbjct: 133 RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV-LCGTPNYIAPEVLSKKG 191
Query: 513 ATTSTDVYSYGILMLEVACGRRSIE 537
            +   DV+S G +M  +  G+   E
Sbjct: 192 HSFEVDVWSIGCIMYTLLVGKPPFE 216

>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 90/200 (45%), Gaps = 15/200 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGR-LRHRNLVQLHGWC 396
           +G G +G V   +       VA+K +         E + + + + + L H N+V+ +G  
Sbjct: 14  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 397 RKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRY--KILIGIAQSLLYLHEECNQ 454
           R+ +   L  +Y   G                    QR+  +++ G+    +YLH     
Sbjct: 74  REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA---QRFFHQLMAGV----VYLH---GI 123
Query: 455 RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQ-TTHIVGTLGYLAPE-LTRTGK 512
            + HRD+KP N+LLD   N K+ DFGLA ++ +    +    + GTL Y+APE L R   
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 513 ATTSTDVYSYGILMLEVACG 532
                DV+S GI++  +  G
Sbjct: 184 HAEPVDVWSCGIVLTAMLAG 203

>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain Length = 345

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/154 (31%), Positives = 71/154 (46%), Gaps = 13/154 (8%)
Query: 386 HRNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSL 445
           H  LV LH   + +  L  V +YV  G                  +   Y   I +A  L
Sbjct: 69  HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF---YSAEISLA--L 123
Query: 446 LYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANP--QTTHIVGTLGYL 503
            YLHE   + +++RD+K  N+LLD+  + KL D+G+ K    G  P   T+   GT  Y+
Sbjct: 124 NYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCK---EGLRPGDTTSXFCGTPNYI 177
Query: 504 APELTRTGKATTSTDVYSYGILMLEVACGRRSIE 537
           APE+ R      S D ++ G+LM E+  GR   +
Sbjct: 178 APEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 211

>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/196 (24%), Positives = 95/196 (48%), Gaps = 12/196 (6%)
Query: 338 VGSGGFGRVYRGLMPSL---GLEVAIKRIGHNSQQGMKE-FVAEIMSMGRLRHRNLVQLH 393
           +G G FG V++G+  S     + VAIK   + +   ++E F+ E ++M +  H ++V+L 
Sbjct: 18  IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 394 GWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECN 453
           G    ++ + ++ +    G                      Y++    + +L YL    +
Sbjct: 78  G-VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQL----STALAYLE---S 129
Query: 454 QRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKA 513
           +R VHRD+   N+L+ +    KLGDFGL++  E     + +     + ++APE     + 
Sbjct: 130 KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRF 189
Query: 514 TTSTDVYSYGILMLEV 529
           T+++DV+ +G+ M E+
Sbjct: 190 TSASDVWMFGVCMWEI 205

>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A Benzolactam-Derived Inhibitor Length = 333

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 93/205 (45%), Gaps = 14/205 (6%)
Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS---QQGMKEFVAEIMSMGR-LRHRNLVQL 392
            +G GGF + +  +  +   EV   +I   S   +   +E ++  +S+ R L H+++V  
Sbjct: 46  FLGKGGFAKCFE-ISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF 104
Query: 393 HGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEEC 452
           HG+    D + +V +     S                 +  R +I++G      YLH   
Sbjct: 105 HGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-QIVLGCQ----YLH--- 156
Query: 453 NQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGK 512
             RV+HRD+K  N+ L+  L  K+GDFGLA   E+    +   + GT  Y+APE+     
Sbjct: 157 RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV-LCGTPNYIAPEVLSKKG 215
Query: 513 ATTSTDVYSYGILMLEVACGRRSIE 537
            +   DV+S G +M  +  G+   E
Sbjct: 216 HSFEVDVWSIGCIMYTLLVGKPPFE 240

>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 90/200 (45%), Gaps = 15/200 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGR-LRHRNLVQLHGWC 396
           +G G +G V   +       VA+K +         E + + + + + L H N+V+ +G  
Sbjct: 14  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 73
Query: 397 RKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRY--KILIGIAQSLLYLHEECNQ 454
           R+ +   L  +Y   G                    QR+  +++ G+    +YLH     
Sbjct: 74  REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA---QRFFHQLMAGV----VYLH---GI 123
Query: 455 RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQ-TTHIVGTLGYLAPE-LTRTGK 512
            + HRD+KP N+LLD   N K+ DFGLA ++ +    +    + GTL Y+APE L R   
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 513 ATTSTDVYSYGILMLEVACG 532
                DV+S GI++  +  G
Sbjct: 184 HAEPVDVWSCGIVLTAMLAG 203

>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase 1 Length = 335

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 90/206 (43%), Gaps = 16/206 (7%)
Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMG-----RLRHRNLVQ 391
            +G GGF + +  +  +   EV   +I   S   +K    E MSM       L H+++V 
Sbjct: 48  FLGKGGFAKCFE-ISDADTKEVFAGKIVPKSLL-LKPHQREKMSMEISIHRSLAHQHVVG 105
Query: 392 LHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEE 451
            HG+    D + +V +     S                 +  R +I++G      YLH  
Sbjct: 106 FHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-QIVLGCQ----YLH-- 158
Query: 452 CNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTG 511
              RV+HRD+K  N+ L+  L  K+GDFGLA   E+    +   + GT  Y+APE+    
Sbjct: 159 -RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV-LCGTPNYIAPEVLSKK 216
Query: 512 KATTSTDVYSYGILMLEVACGRRSIE 537
             +   DV+S G +M  +  G+   E
Sbjct: 217 GHSFEVDVWSIGCIMYTLLVGKPPFE 242

>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A Pyrimidinopyridone Inhibitor Length = 333

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 95/213 (44%), Gaps = 28/213 (13%)
Query: 338 VGSGGFGRVYRGLMPSLG-----LEVAIKRIGHNSQQGMKE-FVAEIMSMGRL-RHRNLV 390
           +G+G FG+V       LG     L+VA+K +   +    KE  ++E+  M  L +H N+V
Sbjct: 54  LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 391 QLHGWCRKQDELLLVYDYVPNG---------SXXXXXXXXXXXXXXXXTWDQRYKILIGI 441
            L G C     +L++ +Y   G         S                +          +
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQV 173
Query: 442 AQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVG--- 498
           AQ + +L    ++  +HRDV   N+LL     AK+GDFGLA+   + +N    +IV    
Sbjct: 174 AQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN----YIVKGNA 226
Query: 499 --TLGYLAPELTRTGKATTSTDVYSYGILMLEV 529
              + ++APE       T  +DV+SYGIL+ E+
Sbjct: 227 RLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI 259

>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From Par-3 Length = 396

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/154 (31%), Positives = 71/154 (46%), Gaps = 13/154 (8%)
Query: 386 HRNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSL 445
           H  LV LH   + +  L  V +YV  G                  +   Y   I +A  L
Sbjct: 112 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF---YSAEISLA--L 166
Query: 446 LYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANP--QTTHIVGTLGYL 503
            YLHE   + +++RD+K  N+LLD+  + KL D+G+ K    G  P   T+   GT  Y+
Sbjct: 167 NYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCK---EGLRPGDTTSTFCGTPNYI 220
Query: 504 APELTRTGKATTSTDVYSYGILMLEVACGRRSIE 537
           APE+ R      S D ++ G+LM E+  GR   +
Sbjct: 221 APEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 254

>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains Length = 656

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/203 (24%), Positives = 99/203 (48%), Gaps = 26/203 (12%)
Query: 338 VGSGGFGRVYRGLMPSL---GLEVAIKRIGHNSQQGMKE-FVAEIMSMGRLRHRNLVQLH 393
           +G G FG V++G+  S     + VAIK   + +   ++E F+ E ++M +  H ++V+L 
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 394 GWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEEC- 452
           G    ++ + ++ +    G                 ++ Q  K  + +A  +LY ++   
Sbjct: 458 G-VITENPVWIIMELCTLGELR--------------SFLQVRKFSLDLASLILYAYQLST 502
Query: 453 ------NQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPE 506
                 ++R VHRD+   N+L+ +    KLGDFGL++  E     + +     + ++APE
Sbjct: 503 ALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 562
Query: 507 LTRTGKATTSTDVYSYGILMLEV 529
                + T+++DV+ +G+ M E+
Sbjct: 563 SINFRRFTSASDVWMFGVCMWEI 585

>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By Structure Based Design And Optimization Of Thiophene Carboxamide Ureas Length = 276

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 90/200 (45%), Gaps = 15/200 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGR-LRHRNLVQLHGWC 396
           +G G +G V   +       VA+K +         E + + + + + L H N+V+ +G  
Sbjct: 15  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 74
Query: 397 RKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRY--KILIGIAQSLLYLHEECNQ 454
           R+ +   L  +Y   G                    QR+  +++ G+    +YLH     
Sbjct: 75  REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA---QRFFHQLMAGV----VYLH---GI 124
Query: 455 RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQ-TTHIVGTLGYLAPE-LTRTGK 512
            + HRD+KP N+LLD   N K+ DFGLA ++ +    +    + GTL Y+APE L R   
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 184
Query: 513 ATTSTDVYSYGILMLEVACG 532
                DV+S GI++  +  G
Sbjct: 185 HAEPVDVWSCGIVLTAMLAG 204

>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain Of Csf-1r Length = 329

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 95/211 (45%), Gaps = 28/211 (13%)
Query: 338 VGSGGFGRVYRGLMPSLG-----LEVAIKRIGHNSQQGMKE-FVAEIMSMGRL-RHRNLV 390
           +G+G FG+V       LG     L+VA+K +   +    KE  ++E+  M  L +H N+V
Sbjct: 54  LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 391 QLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQR-------YKILIGIAQ 443
            L G C     +L++ +Y   G                   D R             +AQ
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKE--DGRPLELRDLLHFSSQVAQ 171
Query: 444 SLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVG----- 498
            + +L    ++  +HRDV   N+LL     AK+GDFGLA+   + +N    +IV      
Sbjct: 172 GMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN----YIVKGNARL 224
Query: 499 TLGYLAPELTRTGKATTSTDVYSYGILMLEV 529
            + ++APE       T  +DV+SYGIL+ E+
Sbjct: 225 PVKWMAPESIFDCVYTVQSDVWSYGILLWEI 255

>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis Length = 394

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 63/206 (30%), Positives = 99/206 (48%), Gaps = 20/206 (9%)
Query: 336 NLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGW 395
            ++G+G FG V++  +     EVAIK++  + +   +E   +IM +  ++H N+V L  +
Sbjct: 46  KVIGNGSFGVVFQAKLVESD-EVAIKKVLQDKRFKNREL--QIMRI--VKHPNVVDLKAF 100
Query: 396 C----RKQDELLL--VYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLH 449
                 K+DE+ L  V +YVP                      + Y  +  + +SL Y+H
Sbjct: 101 FYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLY--MYQLLRSLAYIH 158
Query: 450 EECNQRVVHRDVKPSNILLDTYLNA-KLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELT 508
              +  + HRD+KP N+LLD      KL DFG AKI   G  P  + I     Y APEL 
Sbjct: 159 ---SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAG-EPNVSXICSRY-YRAPELI 213
Query: 509 -RTGKATTSTDVYSYGILMLEVACGR 533
                 TT+ D++S G +M E+  G+
Sbjct: 214 FGATNYTTNIDIWSTGCVMAELMQGQ 239

>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase I G Length = 304

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 61/239 (25%), Positives = 101/239 (42%), Gaps = 17/239 (7%)
Query: 324 ELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGR 383
           +  ++ K F    ++GSG F  V+       G   A+K I  +          EI  + +
Sbjct: 3   QTTNIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKK 62
Query: 384 LRHRNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQ 443
           ++H N+V L           LV   V  G                 +      ++  +  
Sbjct: 63  IKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASL-----VIQQVLS 117
Query: 444 SLLYLHEECNQRVVHRDVKPSNIL-LDTYLNAKL--GDFGLAKIYEHGANPQTTHIVGTL 500
           ++ YLHE     +VHRD+KP N+L L    N+K+   DFGL+K+ ++G     +   GT 
Sbjct: 118 AVKYLHE---NGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGI---MSTACGTP 171
Query: 501 GYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGE 559
           GY+APE+      + + D +S G++   + CG     P     E  L + +KE + E E
Sbjct: 172 GYVAPEVLAQKPYSKAVDCWSIGVITYILLCG---YPPFYEETESKLFEKIKEGYYEFE 227

>pdb|2FMD|A Chain A, Structural Basis Of Carbohydrate Recognition By Bowringia Milbraedii Seed Agglutinin Length = 240

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 109/251 (43%), Gaps = 32/251 (12%)
Query: 6   ADTTSFLYNGFL--HANLSLEGAAYISTSGILTVT------NKSEGLIGHALYPNPLRFK 57
           A++  F +  F     +L  +G A + ++  L +T      N   G +G ALY  P+R  
Sbjct: 1   ANSVCFTFTDFESGQQDLIFQGDASVGSNKALQLTKVDSKGNPQGGSVGRALYTAPIRLW 60
Query: 58  TSNKSVAIDFRTNFVFSILPKYPDLGGQGLAFIIIS--TNRPENCLANQFLGLPNITMSS 115
            S+  VA  F T F FSI  +        L F I S  T  P      + LGL     S+
Sbjct: 61  QSSSLVA-SFETTFTFSI-SQGSSTPADALTFFIASPDTKIPSGS-GGRLLGL--FGSSN 115
Query: 116 STKFSTRMLAVEFDIIQNTELIDINDNHVGIDXXXXXXXXXXXXXYYSGNNHRIPILLRS 175
           +      +++VEFD   NT++ D N  H+GID             +            ++
Sbjct: 116 NAGSDNGVVSVEFDTYPNTDIGDPNYRHIGIDVNSIRSKAASKWDW------------QN 163
Query: 176 GDPIQAWVDY-SSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLI 234
           G    A + Y S+ + L  VS  P   P     ++S  ++L++V   ++  GFSA+TG  
Sbjct: 164 GKTATAHISYNSASKRLSVVSSYPNSSPV----VVSFDVELNNVXPXWVRVGFSATTGQY 219
Query: 235 TASHNVHGWSI 245
           T ++N+  WS 
Sbjct: 220 TQTNNILAWSF 230

>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains. Length = 656

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 49/203 (24%), Positives = 98/203 (48%), Gaps = 26/203 (12%)
Query: 338 VGSGGFGRVYRGLMPSL---GLEVAIKRIGHNSQQGMKE-FVAEIMSMGRLRHRNLVQLH 393
           +G G FG V++G+  S     + VAIK   + +   ++E F+ E ++M +  H ++V+L 
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 394 GWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEEC- 452
           G    ++ + ++ +    G                 ++ Q  K  + +A  +LY ++   
Sbjct: 458 G-VITENPVWIIMELCTLGELR--------------SFLQVRKFSLDLASLILYAYQLST 502
Query: 453 ------NQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPE 506
                 ++R VHRD+   N+L+      KLGDFGL++  E     + +     + ++APE
Sbjct: 503 ALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 562
Query: 507 LTRTGKATTSTDVYSYGILMLEV 529
                + T+++DV+ +G+ M E+
Sbjct: 563 SINFRRFTSASDVWMFGVCMWEI 585

>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By Roscovitine, Aloisine And Indirubin. Length = 292

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 94/204 (46%), Gaps = 12/204 (5%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIG-HNSQQGM-KEFVAEIMSMGRLRHRNLVQLHGW 395
           +G G +G V++         VA+KR+   +  +G+    + EI  +  L+H+N+V+LH  
Sbjct: 10  IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 396 CRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQR 455
                +L LV+++                             L  + + L + H   ++ 
Sbjct: 70  LHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVK-----SFLFQLLKGLGFCH---SRN 121
Query: 456 VVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKA-T 514
           V+HRD+KP N+L++     KL +FGLA+ +       +  +V TL Y  P++    K  +
Sbjct: 122 VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVV-TLWYRPPDVLFGAKLYS 180
Query: 515 TSTDVYSYGILMLEVACGRRSIEP 538
           TS D++S G +  E+A   R + P
Sbjct: 181 TSIDMWSAGCIFAELANAGRPLFP 204

>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor Length = 446

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 88/203 (43%), Gaps = 15/203 (7%)
Query: 336 NLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRL----RHRNLVQ 391
            L+G G FG+V      + G   A+K I        K+ VA  ++  R+    RH  L  
Sbjct: 157 KLLGKGTFGKVILVKEKATGRYYAMK-ILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTA 215
Query: 392 LHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEE 451
           L    +  D L  V +Y   G                   D+       I  +L YLH E
Sbjct: 216 LKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSE-----DRARFYGAEIVSALDYLHSE 270
Query: 452 CNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKI-YEHGANPQTTHIVGTLGYLAPELTRT 510
            N  VV+RD+K  N++LD   + K+ DFGL K   + GA  +T    GT  YLAPE+   
Sbjct: 271 KN--VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT--FCGTPEYLAPEVLED 326
Query: 511 GKATTSTDVYSYGILMLEVACGR 533
                + D +  G++M E+ CGR
Sbjct: 327 NDYGRAVDWWGLGVVMYEMMCGR 349

>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex With N-(4- (5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h- Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide Length = 446

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 88/203 (43%), Gaps = 15/203 (7%)
Query: 336 NLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRL----RHRNLVQ 391
            L+G G FG+V      + G   A+K I        K+ VA  ++  R+    RH  L  
Sbjct: 154 KLLGKGTFGKVILVKEKATGRYYAMK-ILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTA 212
Query: 392 LHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEE 451
           L    +  D L  V +Y   G                   D+       I  +L YLH E
Sbjct: 213 LKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSE-----DRARFYGAEIVSALDYLHSE 267
Query: 452 CNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKI-YEHGANPQTTHIVGTLGYLAPELTRT 510
            N  VV+RD+K  N++LD   + K+ DFGL K   + GA  +T    GT  YLAPE+   
Sbjct: 268 KN--VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT--FCGTPEYLAPEVLED 323
Query: 511 GKATTSTDVYSYGILMLEVACGR 533
                + D +  G++M E+ CGR
Sbjct: 324 NDYGRAVDWWGLGVVMYEMMCGR 346

>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 51/208 (24%), Positives = 95/208 (45%), Gaps = 19/208 (9%)
Query: 338 VGSGGFGRVY----RGLMPSLG-LEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQL 392
           +G G FG+V+      L+P    + VA+K +   S+   ++F  E   +  L+H+++V+ 
Sbjct: 26  LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 393 HGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWD----------QRYKILIGIA 442
            G C +   LL+V++Y+ +G                   +          Q   +   +A
Sbjct: 86  FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 145
Query: 443 QSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IYEHGANPQTTHIVGTLG 501
             ++YL        VHRD+   N L+   L  K+GDFG+++ IY           +  + 
Sbjct: 146 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 202
Query: 502 YLAPELTRTGKATTSTDVYSYGILMLEV 529
           ++ PE     K TT +DV+S+G+++ E+
Sbjct: 203 WMPPESILYRKFTTESDVWSFGVVLWEI 230

>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092, Delete A660- T867) At 2.28 A Resolution Length = 299

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 56/216 (25%), Positives = 94/216 (43%), Gaps = 29/216 (13%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIG-HNSQQGMKEFVAEIMSMGRLRHRNLVQ-LHGW 395
           +G GGFG V+           AIKRI   N +   ++ + E+ ++ +L H  +V+  + W
Sbjct: 13  LGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAW 72
Query: 396 CRKQDELLL------VYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYK-----ILIGIAQS 444
             K     L      VY Y+                    T ++R +     I + IA++
Sbjct: 73  LEKNTTEKLQPSSPKVYLYI--QMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEA 130
Query: 445 LLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQT----------- 493
           + +LH   ++ ++HRD+KPSNI        K+GDFGL    +     QT           
Sbjct: 131 VEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARH 187
Query: 494 THIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEV 529
           T  VGT  Y++PE       +   D++S G+++ E+
Sbjct: 188 TGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFEL 223

>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 51/208 (24%), Positives = 95/208 (45%), Gaps = 19/208 (9%)
Query: 338 VGSGGFGRVY----RGLMPSLG-LEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQL 392
           +G G FG+V+      L+P    + VA+K +   S+   ++F  E   +  L+H+++V+ 
Sbjct: 20  LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 393 HGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWD----------QRYKILIGIA 442
            G C +   LL+V++Y+ +G                   +          Q   +   +A
Sbjct: 80  FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 139
Query: 443 QSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IYEHGANPQTTHIVGTLG 501
             ++YL        VHRD+   N L+   L  K+GDFG+++ IY           +  + 
Sbjct: 140 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 196
Query: 502 YLAPELTRTGKATTSTDVYSYGILMLEV 529
           ++ PE     K TT +DV+S+G+++ E+
Sbjct: 197 WMPPESILYRKFTTESDVWSFGVVLWEI 224

>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently Binding To Wz4002 Length = 331

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 96/208 (46%), Gaps = 22/208 (10%)
Query: 332 FGEQNLVGSGGFGRVYRGLMPSLG----LEVAIKRIGH-NSQQGMKEFVAEIMSMGRLRH 386
           F +  ++GSG FG VY+GL    G    + VAIK +    S +  KE + E   M  + +
Sbjct: 21  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 387 RNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXX--XXXXXTWDQRYKILIGIAQS 444
            ++ +L G C     + L+   +P G                    W       + IA+ 
Sbjct: 81  PHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 133
Query: 445 LLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVG---TLG 501
           + YL    ++R+VHRD+   N+L+ T  + K+ DFGLAK+   GA  +  H  G    + 
Sbjct: 134 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGKVPIK 188
Query: 502 YLAPELTRTGKATTSTDVYSYGILMLEV 529
           ++A E       T  +DV+SYG+ + E+
Sbjct: 189 WMALESILHRIYTHQSDVWSYGVTVWEL 216

>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 91/204 (44%), Gaps = 19/204 (9%)
Query: 332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMK-EFVAEIMSMGRLRHRNLV 390
            GEQ  +G G FG V+ G + +    VA+K         +K +F+ E   + +  H N+V
Sbjct: 118 LGEQ--IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIV 175
Query: 391 QLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGI----AQSLL 446
           +L G C ++  + +V + V  G                     R K L+ +    A  + 
Sbjct: 176 RLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARL--------RVKTLLQMVGDAAAGME 227
Query: 447 YLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGT-LGYLAP 505
           YL  +C    +HRD+   N L+      K+ DFG+++    G    +  +    + + AP
Sbjct: 228 YLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAP 284
Query: 506 ELTRTGKATTSTDVYSYGILMLEV 529
           E    G+ ++ +DV+S+GIL+ E 
Sbjct: 285 EALNYGRYSSESDVWSFGILLWET 308

>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Complex With Aee788 Length = 328

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 96/208 (46%), Gaps = 22/208 (10%)
Query: 332 FGEQNLVGSGGFGRVYRGLMPSLG----LEVAIKRIGH-NSQQGMKEFVAEIMSMGRLRH 386
           F +  ++GSG FG VY+GL    G    + VAIK +    S +  KE + E   M  + +
Sbjct: 18  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 387 RNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXX--XXXXXTWDQRYKILIGIAQS 444
            ++ +L G C     + L+   +P G                    W       + IA+ 
Sbjct: 78  PHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 130
Query: 445 LLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVG---TLG 501
           + YL    ++R+VHRD+   N+L+ T  + K+ DFGLAK+   GA  +  H  G    + 
Sbjct: 131 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGKVPIK 185
Query: 502 YLAPELTRTGKATTSTDVYSYGILMLEV 529
           ++A E       T  +DV+SYG+ + E+
Sbjct: 186 WMALESILHRIYTHQSDVWSYGVTVWEL 213

>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With Sb203580 Length = 362

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 91/231 (39%), Gaps = 28/231 (12%)
Query: 316 GARRFKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQG----- 370
            A R   AEL ++   +  Q  + SG +G V  G+  S G+ VAIKR+ +    G     
Sbjct: 8   AAMRDLIAELHAMQSPYTVQRFISSGSYGAVCAGV-DSEGIPVAIKRVFNTVSDGRTVNI 66
Query: 371 ------MKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXX 424
                  K  + EI  +    H N++ L          + V+   P              
Sbjct: 67  LSDSFLCKRVLREIRLLNHFHHPNILGLRD--------IFVHFEEPAMHKLYLVTELMRT 118
Query: 425 XXXXXTWDQRYKILIGIAQSLLY-----LHEECNQRVVHRDVKPSNILLDTYLNAKLGDF 479
                  DQR  I     Q  +Y     LH      VVHRD+ P NILL    +  + DF
Sbjct: 119 DLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDF 178
Query: 480 GLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTS-TDVYSYGILMLEV 529
            LA+  E  A+   TH V    Y APEL    K  T   D++S G +M E+
Sbjct: 179 NLAR--EDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEM 227

>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 51/208 (24%), Positives = 95/208 (45%), Gaps = 19/208 (9%)
Query: 338 VGSGGFGRVY----RGLMPSLG-LEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQL 392
           +G G FG+V+      L+P    + VA+K +   S+   ++F  E   +  L+H+++V+ 
Sbjct: 49  LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 393 HGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWD----------QRYKILIGIA 442
            G C +   LL+V++Y+ +G                   +          Q   +   +A
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 168
Query: 443 QSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IYEHGANPQTTHIVGTLG 501
             ++YL        VHRD+   N L+   L  K+GDFG+++ IY           +  + 
Sbjct: 169 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 225
Query: 502 YLAPELTRTGKATTSTDVYSYGILMLEV 529
           ++ PE     K TT +DV+S+G+++ E+
Sbjct: 226 WMPPESILYRKFTTESDVWSFGVVLWEI 253

>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor Length = 315

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 96/208 (46%), Gaps = 22/208 (10%)
Query: 332 FGEQNLVGSGGFGRVYRGLMPSLG----LEVAIKRIGH-NSQQGMKEFVAEIMSMGRLRH 386
           F +  ++GSG FG VY+GL    G    + VAIK +    S +  KE + E   M  + +
Sbjct: 11  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 70
Query: 387 RNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXX--XXXXXTWDQRYKILIGIAQS 444
            ++ +L G C     + L+   +P G                    W       + IA+ 
Sbjct: 71  PHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 123
Query: 445 LLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVG---TLG 501
           + YL    ++R+VHRD+   N+L+ T  + K+ DFGLAK+   GA  +  H  G    + 
Sbjct: 124 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGKVPIK 178
Query: 502 YLAPELTRTGKATTSTDVYSYGILMLEV 529
           ++A E       T  +DV+SYG+ + E+
Sbjct: 179 WMALESILHRIYTHQSDVWSYGVTVWEL 206

>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase Domain With Erlotinib Length = 337

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 96/208 (46%), Gaps = 22/208 (10%)
Query: 332 FGEQNLVGSGGFGRVYRGLMPSLG----LEVAIKRIGH-NSQQGMKEFVAEIMSMGRLRH 386
           F +  ++GSG FG VY+GL    G    + VAIK +    S +  KE + E   M  + +
Sbjct: 27  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 86
Query: 387 RNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXX--XXXXXTWDQRYKILIGIAQS 444
            ++ +L G C     + L+   +P G                    W       + IA+ 
Sbjct: 87  PHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 139
Query: 445 LLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVG---TLG 501
           + YL    ++R+VHRD+   N+L+ T  + K+ DFGLAK+   GA  +  H  G    + 
Sbjct: 140 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGKVPIK 194
Query: 502 YLAPELTRTGKATTSTDVYSYGILMLEV 529
           ++A E       T  +DV+SYG+ + E+
Sbjct: 195 WMALESILHRIYTHQSDVWSYGVTVWEL 222

>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation Length = 327

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 96/208 (46%), Gaps = 22/208 (10%)
Query: 332 FGEQNLVGSGGFGRVYRGLMPSLG----LEVAIKRIGH-NSQQGMKEFVAEIMSMGRLRH 386
           F +  ++GSG FG VY+GL    G    + VAIK +    S +  KE + E   M  + +
Sbjct: 17  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 387 RNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXX--XXXXXTWDQRYKILIGIAQS 444
            ++ +L G C     + L+   +P G                    W       + IA+ 
Sbjct: 77  PHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 129
Query: 445 LLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVG---TLG 501
           + YL    ++R+VHRD+   N+L+ T  + K+ DFGLAK+   GA  +  H  G    + 
Sbjct: 130 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGKVPIK 184
Query: 502 YLAPELTRTGKATTSTDVYSYGILMLEV 529
           ++A E       T  +DV+SYG+ + E+
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWEL 212

>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With Bibw2992 Length = 330

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 96/208 (46%), Gaps = 22/208 (10%)
Query: 332 FGEQNLVGSGGFGRVYRGLMPSLG----LEVAIKRIGH-NSQQGMKEFVAEIMSMGRLRH 386
           F +  ++GSG FG VY+GL    G    + VAIK +    S +  KE + E   M  + +
Sbjct: 20  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 387 RNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXX--XXXXXTWDQRYKILIGIAQS 444
            ++ +L G C     + L+   +P G                    W       + IA+ 
Sbjct: 80  PHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 132
Query: 445 LLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVG---TLG 501
           + YL    ++R+VHRD+   N+L+ T  + K+ DFGLAK+   GA  +  H  G    + 
Sbjct: 133 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGKVPIK 187
Query: 502 YLAPELTRTGKATTSTDVYSYGILMLEV 529
           ++A E       T  +DV+SYG+ + E+
Sbjct: 188 WMALESILHRIYTHQSDVWSYGVTVWEL 215

>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase Domain And A Mig6 Peptide Length = 324

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 96/208 (46%), Gaps = 22/208 (10%)
Query: 332 FGEQNLVGSGGFGRVYRGLMPSLG----LEVAIKRIGH-NSQQGMKEFVAEIMSMGRLRH 386
           F +  ++GSG FG VY+GL    G    + VAIK +    S +  KE + E   M  + +
Sbjct: 14  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 73
Query: 387 RNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXX--XXXXXTWDQRYKILIGIAQS 444
            ++ +L G C     + L+   +P G                    W       + IA+ 
Sbjct: 74  PHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAEG 126
Query: 445 LLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVG---TLG 501
           + YL    ++R+VHRD+   N+L+ T  + K+ DFGLAK+   GA  +  H  G    + 
Sbjct: 127 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGKVPIK 181
Query: 502 YLAPELTRTGKATTSTDVYSYGILMLEV 529
           ++A E       T  +DV+SYG+ + E+
Sbjct: 182 WMALESILHRIYTHQSDVWSYGVTVWEL 209

>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6 Bound To Amppnp Length = 576

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 64/240 (26%), Positives = 108/240 (45%), Gaps = 40/240 (16%)
Query: 319 RFKYAELASVTKG-FGEQNLVGSGGFGRVYRGLMPSLGLEVAI---KRIGHNSQQGMKEF 374
           ++K+ E   VTK  F +  ++G GGFG V    + + G   A    ++     ++G    
Sbjct: 172 QWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMA 231
Query: 375 VAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQR 434
           + E   + ++  R +V L      +D L LV   +  G                   D +
Sbjct: 232 LNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGG-------------------DLK 272
Query: 435 YKIL------IGIAQSLLYLHEEC-------NQRVVHRDVKPSNILLDTYLNAKLGDFGL 481
           + I          A+++ Y  E C        +R+V+RD+KP NILLD + + ++ D GL
Sbjct: 273 FHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGL 332
Query: 482 AKIYEHGANPQTTH-IVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQK 540
           A    H    QT    VGT+GY+APE+ +  + T S D ++ G L+ E+  G+   + +K
Sbjct: 333 AV---HVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRK 389

>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With Dacomitinib Length = 329

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 96/208 (46%), Gaps = 22/208 (10%)
Query: 332 FGEQNLVGSGGFGRVYRGLMPSLG----LEVAIKRIGH-NSQQGMKEFVAEIMSMGRLRH 386
           F +  ++GSG FG VY+GL    G    + VAIK +    S +  KE + E   M  + +
Sbjct: 19  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 387 RNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXX--XXXXXTWDQRYKILIGIAQS 444
            ++ +L G C     + L+   +P G                    W       + IA+ 
Sbjct: 79  PHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 131
Query: 445 LLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVG---TLG 501
           + YL    ++R+VHRD+   N+L+ T  + K+ DFGLAK+   GA  +  H  G    + 
Sbjct: 132 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGKVPIK 186
Query: 502 YLAPELTRTGKATTSTDVYSYGILMLEV 529
           ++A E       T  +DV+SYG+ + E+
Sbjct: 187 WMALESILHRIYTHQSDVWSYGVTVWEL 214

>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 34-Jab Length = 327

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 96/208 (46%), Gaps = 22/208 (10%)
Query: 332 FGEQNLVGSGGFGRVYRGLMPSLG----LEVAIKRIGH-NSQQGMKEFVAEIMSMGRLRH 386
           F +  ++GSG FG VY+GL    G    + VAIK +    S +  KE + E   M  + +
Sbjct: 17  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 387 RNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXX--XXXXXTWDQRYKILIGIAQS 444
            ++ +L G C     + L+   +P G                    W       + IA+ 
Sbjct: 77  PHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 129
Query: 445 LLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVG---TLG 501
           + YL    ++R+VHRD+   N+L+ T  + K+ DFGLAK+   GA  +  H  G    + 
Sbjct: 130 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGKVPIK 184
Query: 502 YLAPELTRTGKATTSTDVYSYGILMLEV 529
           ++A E       T  +DV+SYG+ + E+
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWEL 212

>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs Resolution) Length = 362

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 91/231 (39%), Gaps = 28/231 (12%)
Query: 316 GARRFKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQG----- 370
            A R   AEL ++   +  Q  + SG +G V  G+  S G+ VAIKR+ +    G     
Sbjct: 8   AAMRDLIAELHAMQSPYTVQRFISSGSYGAVCAGV-DSEGIPVAIKRVFNTVSDGRTVNI 66
Query: 371 ------MKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXX 424
                  K  + EI  +    H N++ L          + V+   P              
Sbjct: 67  LSDSFLCKRVLREIRLLNHFHHPNILGLRD--------IFVHFEEPAMHKLYLVTELMRT 118
Query: 425 XXXXXTWDQRYKILIGIAQSLLY-----LHEECNQRVVHRDVKPSNILLDTYLNAKLGDF 479
                  DQR  I     Q  +Y     LH      VVHRD+ P NILL    +  + DF
Sbjct: 119 DLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDF 178
Query: 480 GLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTS-TDVYSYGILMLEV 529
            LA+  E  A+   TH V    Y APEL    K  T   D++S G +M E+
Sbjct: 179 NLAR--EDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEM 227

>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3 Domain Length = 341

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 59/216 (27%), Positives = 100/216 (46%), Gaps = 21/216 (9%)
Query: 327 SVTKGFGEQNL-----VGSGGFGRVYRGLM--PS-LGLEVAIKRIGHN---SQQGMKEFV 375
           S+T   GE++L     +G G FG V RG    PS   + VA+K +  +     + M +F+
Sbjct: 4   SLTCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFI 63
Query: 376 AEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRY 435
            E+ +M  L HRNL++L+G       + +V +  P GS                    RY
Sbjct: 64  REVNAMHSLDHRNLIRLYG-VVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTL--SRY 120
Query: 436 KILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANP--QT 493
            +   +A+ + YL    ++R +HRD+   N+LL T    K+GDFGL +      +     
Sbjct: 121 AV--QVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQ 175
Query: 494 THIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEV 529
            H      + APE  +T   + ++D + +G+ + E+
Sbjct: 176 EHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEM 211

>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992 Length = 330

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 96/208 (46%), Gaps = 22/208 (10%)
Query: 332 FGEQNLVGSGGFGRVYRGLMPSLG----LEVAIKRIGH-NSQQGMKEFVAEIMSMGRLRH 386
           F +  ++GSG FG VY+GL    G    + VAIK +    S +  KE + E   M  + +
Sbjct: 20  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 387 RNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXX--XXXXXTWDQRYKILIGIAQS 444
            ++ +L G C     + L+   +P G                    W       + IA+ 
Sbjct: 80  PHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 132
Query: 445 LLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVG---TLG 501
           + YL    ++R+VHRD+   N+L+ T  + K+ DFGLAK+   GA  +  H  G    + 
Sbjct: 133 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGKVPIK 187
Query: 502 YLAPELTRTGKATTSTDVYSYGILMLEV 529
           ++A E       T  +DV+SYG+ + E+
Sbjct: 188 WMALESILHRIYTHQSDVWSYGVTVWEL 215

>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain Length = 330

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 96/208 (46%), Gaps = 22/208 (10%)
Query: 332 FGEQNLVGSGGFGRVYRGLMPSLG----LEVAIKRIGH-NSQQGMKEFVAEIMSMGRLRH 386
           F +  ++GSG FG VY+GL    G    + VAIK +    S +  KE + E   M  + +
Sbjct: 20  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 387 RNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXX--XXXXXTWDQRYKILIGIAQS 444
            ++ +L G C     + L+   +P G                    W       + IA+ 
Sbjct: 80  PHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 132
Query: 445 LLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVG---TLG 501
           + YL    ++R+VHRD+   N+L+ T  + K+ DFGLAK+   GA  +  H  G    + 
Sbjct: 133 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGKVPIK 187
Query: 502 YLAPELTRTGKATTSTDVYSYGILMLEV 529
           ++A E       T  +DV+SYG+ + E+
Sbjct: 188 WMALESILHRIYTHQSDVWSYGVTVWEL 215

>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Compex With Hki-272 Length = 328

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 96/208 (46%), Gaps = 22/208 (10%)
Query: 332 FGEQNLVGSGGFGRVYRGLMPSLG----LEVAIKRIGH-NSQQGMKEFVAEIMSMGRLRH 386
           F +  ++GSG FG VY+GL    G    + VAIK +    S +  KE + E   M  + +
Sbjct: 18  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 387 RNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXX--XXXXXTWDQRYKILIGIAQS 444
            ++ +L G C     + L+   +P G                    W       + IA+ 
Sbjct: 78  PHVCRLLGICLTST-VQLIMQLMPFGXLLDYVREHKDNIGSQYLLNW------CVQIAKG 130
Query: 445 LLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVG---TLG 501
           + YL    ++R+VHRD+   N+L+ T  + K+ DFGLAK+   GA  +  H  G    + 
Sbjct: 131 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGKVPIK 185
Query: 502 YLAPELTRTGKATTSTDVYSYGILMLEV 529
           ++A E       T  +DV+SYG+ + E+
Sbjct: 186 WMALESILHRIYTHQSDVWSYGVTVWEL 213

>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain Length = 277

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 59/216 (27%), Positives = 100/216 (46%), Gaps = 21/216 (9%)
Query: 327 SVTKGFGEQNL-----VGSGGFGRVYRGLM--PS-LGLEVAIKRIGHN---SQQGMKEFV 375
           S+T   GE++L     +G G FG V RG    PS   + VA+K +  +     + M +F+
Sbjct: 4   SLTCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFI 63
Query: 376 AEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRY 435
            E+ +M  L HRNL++L+G       + +V +  P GS                    RY
Sbjct: 64  REVNAMHSLDHRNLIRLYG-VVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTL--SRY 120
Query: 436 KILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANP--QT 493
            +   +A+ + YL    ++R +HRD+   N+LL T    K+GDFGL +      +     
Sbjct: 121 AV--QVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQ 175
Query: 494 THIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEV 529
            H      + APE  +T   + ++D + +G+ + E+
Sbjct: 176 EHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEM 211

>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor- Gw572016 Length = 352

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 96/208 (46%), Gaps = 22/208 (10%)
Query: 332 FGEQNLVGSGGFGRVYRGLMPSLG----LEVAIKRIGH-NSQQGMKEFVAEIMSMGRLRH 386
           F +  ++GSG FG VY+GL    G    + VAIK +    S +  KE + E   M  + +
Sbjct: 42  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 101
Query: 387 RNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXX--XXXXXTWDQRYKILIGIAQS 444
            ++ +L G C     + L+   +P G                    W       + IA+ 
Sbjct: 102 PHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 154
Query: 445 LLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVG---TLG 501
           + YL    ++R+VHRD+   N+L+ T  + K+ DFGLAK+   GA  +  H  G    + 
Sbjct: 155 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGKVPIK 209
Query: 502 YLAPELTRTGKATTSTDVYSYGILMLEV 529
           ++A E       T  +DV+SYG+ + E+
Sbjct: 210 WMALESILHRIYTHQSDVWSYGVTVWEL 237

>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor Receptor Length = 333

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 96/208 (46%), Gaps = 22/208 (10%)
Query: 332 FGEQNLVGSGGFGRVYRGLMPSLG----LEVAIKRIGH-NSQQGMKEFVAEIMSMGRLRH 386
           F +  ++GSG FG VY+GL    G    + VAIK +    S +  KE + E   M  + +
Sbjct: 23  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 82
Query: 387 RNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXX--XXXXXTWDQRYKILIGIAQS 444
            ++ +L G C     + L+   +P G                    W       + IA+ 
Sbjct: 83  PHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 135
Query: 445 LLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVG---TLG 501
           + YL    ++R+VHRD+   N+L+ T  + K+ DFGLAK+   GA  +  H  G    + 
Sbjct: 136 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGKVPIK 190
Query: 502 YLAPELTRTGKATTSTDVYSYGILMLEV 529
           ++A E       T  +DV+SYG+ + E+
Sbjct: 191 WMALESILHRIYTHQSDVWSYGVTVWEL 218

>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In Complex With Dacomitinib (soaked) Length = 329

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 96/208 (46%), Gaps = 22/208 (10%)
Query: 332 FGEQNLVGSGGFGRVYRGLMPSLG----LEVAIKRIGH-NSQQGMKEFVAEIMSMGRLRH 386
           F +  ++GSG FG VY+GL    G    + VAIK +    S +  KE + E   M  + +
Sbjct: 19  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 387 RNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXX--XXXXXTWDQRYKILIGIAQS 444
            ++ +L G C     + L+   +P G                    W       + IA+ 
Sbjct: 79  PHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 131
Query: 445 LLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVG---TLG 501
           + YL    ++R+VHRD+   N+L+ T  + K+ DFGLAK+   GA  +  H  G    + 
Sbjct: 132 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGKVPIK 186
Query: 502 YLAPELTRTGKATTSTDVYSYGILMLEV 529
           ++A E       T  +DV+SYG+ + E+
Sbjct: 187 WMALESILHRIYTHQSDVWSYGVTVWEL 214

>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In Complex With Sangivamycin Length = 576

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 64/240 (26%), Positives = 108/240 (45%), Gaps = 40/240 (16%)
Query: 319 RFKYAELASVTKG-FGEQNLVGSGGFGRVYRGLMPSLGLEVAI---KRIGHNSQQGMKEF 374
           ++K+ E   VTK  F +  ++G GGFG V    + + G   A    ++     ++G    
Sbjct: 172 QWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMA 231
Query: 375 VAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQR 434
           + E   + ++  R +V L      +D L LV   +  G                   D +
Sbjct: 232 LNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGG-------------------DLK 272
Query: 435 YKIL------IGIAQSLLYLHEEC-------NQRVVHRDVKPSNILLDTYLNAKLGDFGL 481
           + I          A+++ Y  E C        +R+V+RD+KP NILLD + + ++ D GL
Sbjct: 273 FHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGL 332
Query: 482 AKIYEHGANPQTTH-IVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQK 540
           A    H    QT    VGT+GY+APE+ +  + T S D ++ G L+ E+  G+   + +K
Sbjct: 333 AV---HVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRK 389

>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole Inhibitor Length = 327

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 96/208 (46%), Gaps = 22/208 (10%)
Query: 332 FGEQNLVGSGGFGRVYRGLMPSLG----LEVAIKRIGH-NSQQGMKEFVAEIMSMGRLRH 386
           F +  ++GSG FG VY+GL    G    + VAIK +    S +  KE + E   M  + +
Sbjct: 17  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 387 RNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXX--XXXXXTWDQRYKILIGIAQS 444
            ++ +L G C     + L+   +P G                    W       + IA+ 
Sbjct: 77  PHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 129
Query: 445 LLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVG---TLG 501
           + YL    ++R+VHRD+   N+L+ T  + K+ DFGLAK+   GA  +  H  G    + 
Sbjct: 130 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGKVPIK 184
Query: 502 YLAPELTRTGKATTSTDVYSYGILMLEV 529
           ++A E       T  +DV+SYG+ + E+
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWEL 212

>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In Complex With Amp-Pnp Length = 330

Iteration: 1
 Score = 63.2 bits (152), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 96/208 (46%), Gaps = 22/208 (10%)
Query: 332 FGEQNLVGSGGFGRVYRGLMPSLG----LEVAIKRIGH-NSQQGMKEFVAEIMSMGRLRH 386
           F +  ++GSG FG VY+GL    G    + VAIK +    S +  KE + E   M  + +
Sbjct: 20  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 387 RNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXX--XXXXXTWDQRYKILIGIAQS 444
            ++ +L G C     + L+   +P G                    W       + IA+ 
Sbjct: 80  PHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 132
Query: 445 LLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVG---TLG 501
           + YL    ++R+VHRD+   N+L+ T  + K+ DFGLAK+   GA  +  H  G    + 
Sbjct: 133 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGKVPIK 187
Query: 502 YLAPELTRTGKATTSTDVYSYGILMLEV 529
           ++A E       T  +DV+SYG+ + E+
Sbjct: 188 WMALESILHRIYTHQSDVWSYGVTVWEL 215

>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent Protein Kinase Ii Gamma Length = 336

Iteration: 1
 Score = 63.2 bits (152), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 57/222 (25%), Positives = 94/222 (42%), Gaps = 17/222 (7%)
Query: 313 IQCGARRFKYAELASVTKGFGEQNL---VGSGGFGRVYRGLMPSLGLEVAIKRIGHN--S 367
           +  G     +  +A+ T+   +  L   +G G F  V R +  +   E A K I     S
Sbjct: 11  VDLGTENLYFQXMATCTRFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLS 70
Query: 368 QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXX 427
            +  ++   E      L+H N+V+LH    ++    LV+D V  G               
Sbjct: 71  ARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEA 130
Query: 428 XXTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNA---KLGDFGLAKI 484
             +       +  I +S+ ++H+     +VHRD+KP N+LL +       KL DFGLA I
Sbjct: 131 DAS-----HCIHQILESVNHIHQ---HDIVHRDLKPENLLLASKCKGAAVKLADFGLA-I 181
Query: 485 YEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILM 526
              G         GT GYL+PE+ R        D+++ G+++
Sbjct: 182 EVQGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGVIL 223

>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 13-Jab Length = 327

Iteration: 1
 Score = 63.2 bits (152), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 96/208 (46%), Gaps = 22/208 (10%)
Query: 332 FGEQNLVGSGGFGRVYRGLMPSLG----LEVAIKRIGH-NSQQGMKEFVAEIMSMGRLRH 386
           F +  ++GSG FG VY+GL    G    + VAIK +    S +  KE + E   M  + +
Sbjct: 17  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 387 RNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXX--XXXXXTWDQRYKILIGIAQS 444
            ++ +L G C     + L+   +P G                    W       + IA+ 
Sbjct: 77  PHVCRLLGICLTST-VQLITQLMPFGXLLDYVREHKDNIGSQYLLNW------CVQIAKG 129
Query: 445 LLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVG---TLG 501
           + YL    ++R+VHRD+   N+L+ T  + K+ DFGLAK+   GA  +  H  G    + 
Sbjct: 130 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGKVPIK 184
Query: 502 YLAPELTRTGKATTSTDVYSYGILMLEV 529
           ++A E       T  +DV+SYG+ + E+
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWEL 212

>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In Complex With Amppnp Length = 334

Iteration: 1
 Score = 63.2 bits (152), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 96/208 (46%), Gaps = 22/208 (10%)
Query: 332 FGEQNLVGSGGFGRVYRGLMPSLG----LEVAIKRIGH-NSQQGMKEFVAEIMSMGRLRH 386
           F +  ++GSG FG VY+GL    G    + VAIK +    S +  KE + E   M  + +
Sbjct: 24  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 387 RNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXX--XXXXXTWDQRYKILIGIAQS 444
            ++ +L G C     + L+   +P G                    W       + IA+ 
Sbjct: 84  PHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 136
Query: 445 LLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVG---TLG 501
           + YL    ++R+VHRD+   N+L+ T  + K+ DFGLAK+   GA  +  H  G    + 
Sbjct: 137 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGKVPIK 191
Query: 502 YLAPELTRTGKATTSTDVYSYGILMLEV 529
           ++A E       T  +DV+SYG+ + E+
Sbjct: 192 WMALESILHRIYTHQSDVWSYGVTVWEL 219

>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 63.2 bits (152), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 89/200 (44%), Gaps = 15/200 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGR-LRHRNLVQLHGWC 396
           +G G  G V   +       VA+K +         E + + + + + L H N+V+ +G  
Sbjct: 14  LGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 397 RKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRY--KILIGIAQSLLYLHEECNQ 454
           R+ +   L  +Y   G                    QR+  +++ G+    +YLH     
Sbjct: 74  REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA---QRFFHQLMAGV----VYLH---GI 123
Query: 455 RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQ-TTHIVGTLGYLAPE-LTRTGK 512
            + HRD+KP N+LLD   N K+ DFGLA ++ +    +    + GTL Y+APE L R   
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 513 ATTSTDVYSYGILMLEVACG 532
                DV+S GI++  +  G
Sbjct: 184 HAEPVDVWSCGIVLTAMLAG 203

>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377

Iteration: 1
 Score = 63.2 bits (152), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 91/204 (44%), Gaps = 19/204 (9%)
Query: 332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMK-EFVAEIMSMGRLRHRNLV 390
            GEQ  +G G FG V+ G + +    VA+K         +K +F+ E   + +  H N+V
Sbjct: 118 LGEQ--IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIV 175
Query: 391 QLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGI----AQSLL 446
           +L G C ++  + +V + V  G                     R K L+ +    A  + 
Sbjct: 176 RLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARL--------RVKTLLQMVGDAAAGME 227
Query: 447 YLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGT-LGYLAP 505
           YL  +C    +HRD+   N L+      K+ DFG+++    G    +  +    + + AP
Sbjct: 228 YLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAP 284
Query: 506 ELTRTGKATTSTDVYSYGILMLEV 529
           E    G+ ++ +DV+S+GIL+ E 
Sbjct: 285 EALNYGRYSSESDVWSFGILLWET 308

>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1) Catalytic Domain Length = 317

Iteration: 1
 Score = 63.2 bits (152), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 54/212 (25%), Positives = 86/212 (40%), Gaps = 14/212 (6%)
Query: 330 KGFGEQNLVGSGGFGRVYR----GLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLR 385
           K +     +G GGF + Y             +V  K +     Q  K    EI     L 
Sbjct: 42  KRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEK-MSTEIAIHKSLD 100
Query: 386 HRNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSL 445
           + ++V  HG+    D + +V +     S                 +  R  I     Q +
Sbjct: 101 NPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI-----QGV 155
Query: 446 LYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAP 505
            YLH   N RV+HRD+K  N+ L+  ++ K+GDFGLA   E     + T + GT  Y+AP
Sbjct: 156 QYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKT-LCGTPNYIAP 211
Query: 506 ELTRTGKATTSTDVYSYGILMLEVACGRRSIE 537
           E+      +   D++S G ++  +  G+   E
Sbjct: 212 EVLCKKGHSFEVDIWSLGCILYTLLVGKPPFE 243

>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At Thr265 Length = 278

Iteration: 1
 Score = 62.8 bits (151), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 92/198 (46%), Gaps = 20/198 (10%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGH----NSQQGM--KEFVAEIMSMGRLRHRNLVQ 391
           +GSG F  V +      G E A K I      +S++G+  +E   E+  +  +RH N++ 
Sbjct: 20  LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 79
Query: 392 LHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEE 451
           LH     + +++L+ + V  G                 T D+  + L  I   + YLH  
Sbjct: 80  LHDIFENKTDVVLILELVSGGE-----LFDFLAEKESLTEDEATQFLKQILDGVHYLH-- 132
Query: 452 CNQRVVHRDVKPSNI-LLDTYL---NAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
            ++R+ H D+KP NI LLD  +     KL DFG+A   E G   +  +I GT  ++APE+
Sbjct: 133 -SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGN--EFKNIFGTPEFVAPEI 189
Query: 508 TRTGKATTSTDVYSYGIL 525
                     D++S G++
Sbjct: 190 VNYEPLGLEADMWSIGVI 207

>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine Length = 353

Iteration: 1
 Score = 62.8 bits (151), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 94/212 (44%), Gaps = 23/212 (10%)
Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRI-------GHNSQQGMKEFVAEIMSMGRLRHRNL 389
           ++G G FG+V    +   G   A+K +         + +  M E    I+S+ R  H  L
Sbjct: 30  VLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTE--KRILSLAR-NHPFL 86
Query: 390 VQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIG-IAQSLLYL 448
            QL    +  D L  V ++V  G                   + R +     I  +L++L
Sbjct: 87  TQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFD------EARARFYAAEIISALMFL 140
Query: 449 HEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTH-IVGTLGYLAPEL 507
           H   ++ +++RD+K  N+LLD   + KL DFG+ K  E   N  TT    GT  Y+APE+
Sbjct: 141 H---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCK--EGICNGVTTATFCGTPDYIAPEI 195
Query: 508 TRTGKATTSTDVYSYGILMLEVACGRRSIEPQ 539
            +      + D ++ G+L+ E+ CG    E +
Sbjct: 196 LQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAE 227

>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l) Activating Mutant Length = 367

Iteration: 1
 Score = 62.8 bits (151), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 93/207 (44%), Gaps = 19/207 (9%)
Query: 335 QNL--VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGM--KEFVAEIMSMGRLRHRN-- 388
           QNL  VGSG +G V        GL VA+K++    Q  +  K    E+  +  ++H N  
Sbjct: 32  QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 91
Query: 389 -LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
            L+ +    R  +E   VY      +                T D    ++  I + L Y
Sbjct: 92  GLLDVFTPARSLEEFNDVYLV----THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 147
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
           +H   +  ++HRD+KPSN+ ++     K+ DFGLA+   H A+  T + V T  Y APE+
Sbjct: 148 IH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTADEMTGY-VATRWYRAPEI 200
Query: 508 TRTGKATTST-DVYSYGILMLEVACGR 533
                    T D++S G +M E+  GR
Sbjct: 201 MLNWMHYNQTVDIWSVGCIMAELLTGR 227

>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a) Activating Mutant Length = 367

Iteration: 1
 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 93/207 (44%), Gaps = 19/207 (9%)
Query: 335 QNL--VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGM--KEFVAEIMSMGRLRHRN-- 388
           QNL  VGSG +G V        GL VA+K++    Q  +  K    E+  +  ++H N  
Sbjct: 32  QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 91
Query: 389 -LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
            L+ +    R  +E   VY      +                T D    ++  I + L Y
Sbjct: 92  GLLDVFTPARSLEEFNDVYLV----THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 147
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
           +H   +  ++HRD+KPSN+ ++     K+ DFGLA+   H A+  T + V T  Y APE+
Sbjct: 148 IH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTADEMTGY-VATRWYRAPEI 200
Query: 508 TRTGKATTST-DVYSYGILMLEVACGR 533
                    T D++S G +M E+  GR
Sbjct: 201 MLNWMHYNQTVDIWSVGCIMAELLTGR 227

>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s) Activating Mutant Form-A Length = 367

Iteration: 1
 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 93/207 (44%), Gaps = 19/207 (9%)
Query: 335 QNL--VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGM--KEFVAEIMSMGRLRHRN-- 388
           QNL  VGSG +G V        GL VA+K++    Q  +  K    E+  +  ++H N  
Sbjct: 32  QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 91
Query: 389 -LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
            L+ +    R  +E   VY      +                T D    ++  I + L Y
Sbjct: 92  GLLDVFTPARSLEEFNDVYLV----THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 147
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
           +H   +  ++HRD+KPSN+ ++     K+ DFGLA+   H A+  T + V T  Y APE+
Sbjct: 148 IH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTADEMTGY-VATRWYRAPEI 200
Query: 508 TRTGKATTST-DVYSYGILMLEVACGR 533
                    T D++S G +M E+  GR
Sbjct: 201 MLNWMHYNQTVDIWSVGCIMAELLTGR 227

>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights Into Receptor Autoregulation Length = 343

Iteration: 1
 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 51/218 (23%), Positives = 92/218 (42%), Gaps = 29/218 (13%)
Query: 338 VGSGGFGRVYRGLMPSL-----GLEVAIKRIGHNSQQGMK-EFVAEIMSMGRLRHRNLVQ 391
           +G G FGRV++   P L        VA+K +   +   M+ +F  E   M    + N+V+
Sbjct: 55  IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 392 LHGWCRKQDELLLVYDYVPNG-------------------SXXXXXXXXXXXXXXXXTWD 432
           L G C     + L+++Y+  G                   S                +  
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCA 174
Query: 433 QRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IYEHGANP 491
           ++  I   +A  + YL E   ++ VHRD+   N L+   +  K+ DFGL++ IY      
Sbjct: 175 EQLCIARQVAAGMAYLSE---RKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYK 231
Query: 492 QTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEV 529
              +    + ++ PE     + TT +DV++YG+++ E+
Sbjct: 232 ADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEI 269

>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor Length = 275

Iteration: 1
 Score = 62.8 bits (151), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 57/210 (27%), Positives = 97/210 (46%), Gaps = 21/210 (10%)
Query: 333 GEQNL-----VGSGGFGRVYRGLM--PS-LGLEVAIKRIGHN---SQQGMKEFVAEIMSM 381
           GE++L     +G G FG V RG    PS   + VA+K +  +     + M +F+ E+ +M
Sbjct: 6   GEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAM 65
Query: 382 GRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGI 441
             L HRNL++L+G       + +V +  P GS                    RY +   +
Sbjct: 66  HSLDHRNLIRLYG-VVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTL--SRYAV--QV 120
Query: 442 AQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQT--THIVGT 499
           A+ + YL    ++R +HRD+   N+LL T    K+GDFGL +      +      H    
Sbjct: 121 AEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVP 177
Query: 500 LGYLAPELTRTGKATTSTDVYSYGILMLEV 529
             + APE  +T   + ++D + +G+ + E+
Sbjct: 178 FAWCAPESLKTRTFSHASDTWMFGVTLWEM 207

>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3 (Dapk3) In Complex With A Beta-Carboline Ligand Length = 283

Iteration: 1
 Score = 62.8 bits (151), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 95/203 (46%), Gaps = 22/203 (10%)
Query: 333 GEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGH----NSQQGM--KEFVAEIMSMGRLRH 386
           GE+  +GSG F  V +      G E A K I      +S++G+  +E   E+  +  +RH
Sbjct: 10  GEE--LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRH 67
Query: 387 RNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLL 446
            N++ LH     + +++L+ + V  G                 T D+  + L  I   + 
Sbjct: 68  PNIITLHDIFENKTDVVLILELVSGGE-----LFDFLAEKESLTEDEATQFLKQILDGVH 122
Query: 447 YLHEECNQRVVHRDVKPSNI-LLDTYL---NAKLGDFGLAKIYEHGANPQTTHIVGTLGY 502
           YLH   ++R+ H D+KP NI LLD  +     KL DFG+A   E G   +  +I GT  +
Sbjct: 123 YLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGN--EFKNIFGTPEF 177
Query: 503 LAPELTRTGKATTSTDVYSYGIL 525
           +APE+          D++S G++
Sbjct: 178 VAPEIVNYEPLGLEADMWSIGVI 200

>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95 Length = 276

Iteration: 1
 Score = 62.4 bits (150), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 57/210 (27%), Positives = 97/210 (46%), Gaps = 21/210 (10%)
Query: 333 GEQNL-----VGSGGFGRVYRGLM--PS-LGLEVAIKRIGHN---SQQGMKEFVAEIMSM 381
           GE++L     +G G FG V RG    PS   + VA+K +  +     + M +F+ E+ +M
Sbjct: 6   GEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAM 65
Query: 382 GRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGI 441
             L HRNL++L+G       + +V +  P GS                    RY +   +
Sbjct: 66  HSLDHRNLIRLYG-VVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTL--SRYAV--QV 120
Query: 442 AQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANP--QTTHIVGT 499
           A+ + YL    ++R +HRD+   N+LL T    K+GDFGL +      +      H    
Sbjct: 121 AEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVP 177
Query: 500 LGYLAPELTRTGKATTSTDVYSYGILMLEV 529
             + APE  +T   + ++D + +G+ + E+
Sbjct: 178 FAWCAPESLKTRTFSHASDTWMFGVTLWEM 207

>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484

Iteration: 1
 Score = 62.4 bits (150), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 92/198 (46%), Gaps = 17/198 (8%)
Query: 335 QNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKE-FVAEIMSMGRLRHRNLVQ 391
           Q ++G G FG V        G E A+K I      Q+  KE  + E+  + +L H N+++
Sbjct: 31  QRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMK 90
Query: 392 LHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEE 451
           L+ +   +    LV +    G                       +I+  +   + Y+H+ 
Sbjct: 91  LYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA-----RIIRQVLSGITYMHK- 144
Query: 452 CNQRVVHRDVKPSNILLDTY---LNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELT 508
              ++VHRD+KP N+LL++     N ++ DFGL+  +E  A+ +    +GT  Y+APE+ 
Sbjct: 145 --NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE--ASKKMKDKIGTAYYIAPEVL 200
Query: 509 RTGKATTSTDVYSYGILM 526
             G      DV+S G+++
Sbjct: 201 H-GTYDEKCDVWSTGVIL 217

>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase Length = 360

Iteration: 1
 Score = 62.4 bits (150), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 91/207 (43%), Gaps = 19/207 (9%)
Query: 335 QNL--VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGM--KEFVAEIMSMGRLRHRN-- 388
           QNL  VGSG +G V        GL VA+K++    Q  +  K    E+  +  ++H N  
Sbjct: 25  QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 84
Query: 389 -LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
            L+ +    R  +E   VY      +                T D    ++  I + L Y
Sbjct: 85  GLLDVFTPARSLEEFNDVYLV----THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
           +H   +  ++HRD+KPSN+ ++     K+ DFGLA+      + + T  V T  Y APE+
Sbjct: 141 IH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEI 193
Query: 508 TRTGKATTST-DVYSYGILMLEVACGR 533
                    T D++S G +M E+  GR
Sbjct: 194 MLNAMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-amino-1-(4- Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol Length = 273

Iteration: 1
 Score = 62.4 bits (150), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 57/210 (27%), Positives = 97/210 (46%), Gaps = 21/210 (10%)
Query: 333 GEQNL-----VGSGGFGRVYRGLM--PS-LGLEVAIKRIGHN---SQQGMKEFVAEIMSM 381
           GE++L     +G G FG V RG    PS   + VA+K +  +     + M +F+ E+ +M
Sbjct: 6   GEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAM 65
Query: 382 GRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGI 441
             L HRNL++L+G       + +V +  P GS                    RY +   +
Sbjct: 66  HSLDHRNLIRLYG-VVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTL--SRYAV--QV 120
Query: 442 AQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANP--QTTHIVGT 499
           A+ + YL    ++R +HRD+   N+LL T    K+GDFGL +      +      H    
Sbjct: 121 AEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVP 177
Query: 500 LGYLAPELTRTGKATTSTDVYSYGILMLEV 529
             + APE  +T   + ++D + +G+ + E+
Sbjct: 178 FAWCAPESLKTRTFSHASDTWMFGVTLWEM 207

>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 62.4 bits (150), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 52/201 (25%), Positives = 93/201 (46%), Gaps = 16/201 (7%)
Query: 338 VGSGGFGRV----YRGLMPSLGLEVAIKRIGHNSQ-QGMKEFVAEIMSMGRLRHRNLVQL 392
           +G G FG+V    Y     + G +VA+K +   S    + +   EI  +  L H N+V+ 
Sbjct: 29  LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 393 HGWCRKQ--DELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHE 450
            G C +   + + L+ +++P+GS                   Q+ K  + I + + YL  
Sbjct: 89  KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKI----NLKQQLKYAVQICKGMDYLG- 143
Query: 451 ECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHI--VGTLGYLAPELT 508
             +++ VHRD+   N+L+++    K+GDFGL K  E      T        + + APE  
Sbjct: 144 --SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECL 201
Query: 509 RTGKATTSTDVYSYGILMLEV 529
              K   ++DV+S+G+ + E+
Sbjct: 202 MQSKFYIASDVWSFGVTLHEL 222

>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide And Inhibitor Length = 342

Iteration: 1
 Score = 62.4 bits (150), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 64/224 (28%), Positives = 98/224 (43%), Gaps = 17/224 (7%)
Query: 336 NLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRL----RHRNLVQ 391
            L+G G FG+V      + G   A+K I        K+ VA  ++  R+    RH  L  
Sbjct: 16  KLLGKGTFGKVILVKEKATGRYYAMK-ILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTA 74
Query: 392 LHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEE 451
           L    +  D L  V +Y   G                 + D+       I  +L YLH E
Sbjct: 75  LKYSFQTHDRLCFVMEYANGGELFFHLSRERVF-----SEDRARFYGAEIVSALDYLHSE 129
Query: 452 CNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKI-YEHGANPQTTHIVGTLGYLAPELTRT 510
            N  VV+RD+K  N++LD   + K+ DFGL K   + GA  +     GT  YLAPE+   
Sbjct: 130 KN--VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKX--FCGTPEYLAPEVLED 185
Query: 511 GKATTSTDVYSYGILMLEVACGRRSI--EPQKAAAELLLVDWVK 552
                + D +  G++M E+ CGR     +  +   EL+L++ ++
Sbjct: 186 NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIR 229

>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363 Length = 340

Iteration: 1
 Score = 62.4 bits (150), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 64/224 (28%), Positives = 98/224 (43%), Gaps = 17/224 (7%)
Query: 336 NLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRL----RHRNLVQ 391
            L+G G FG+V      + G   A+K I        K+ VA  ++  R+    RH  L  
Sbjct: 14  KLLGKGTFGKVILVKEKATGRYYAMK-ILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTA 72
Query: 392 LHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEE 451
           L    +  D L  V +Y   G                 + D+       I  +L YLH E
Sbjct: 73  LKYSFQTHDRLCFVMEYANGGELFFHLSRERVF-----SEDRARFYGAEIVSALDYLHSE 127
Query: 452 CNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKI-YEHGANPQTTHIVGTLGYLAPELTRT 510
            N  VV+RD+K  N++LD   + K+ DFGL K   + GA  +     GT  YLAPE+   
Sbjct: 128 KN--VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKX--FCGTPEYLAPEVLED 183
Query: 511 GKATTSTDVYSYGILMLEVACGRRSI--EPQKAAAELLLVDWVK 552
                + D +  G++M E+ CGR     +  +   EL+L++ ++
Sbjct: 184 NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIR 227

>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain Length = 335

Iteration: 1
 Score = 62.4 bits (150), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 62/228 (27%), Positives = 98/228 (42%), Gaps = 18/228 (7%)
Query: 332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN---SQQGMKEFVAEIMSMGRLRHRN 388
           F    L+G G FG+V      + G   A+K +      ++  +   V E   +   RH  
Sbjct: 7   FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKIL-IGIAQSLLY 447
           L  L    +  D L  V +Y   G                   ++R +     I  +L Y
Sbjct: 67  LTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFT------EERARFYGAEIVSALEY 120
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKI-YEHGANPQTTHIVGTLGYLAPE 506
           LH   ++ VV+RD+K  N++LD   + K+ DFGL K     GA  +T    GT  YLAPE
Sbjct: 121 LH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT--FCGTPEYLAPE 175
Query: 507 LTRTGKATTSTDVYSYGILMLEVACGRRSIEPQ--KAAAELLLVDWVK 552
           +        + D +  G++M E+ CGR     Q  +   EL+L++ ++
Sbjct: 176 VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR 223

>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor Length = 341

Iteration: 1
 Score = 62.4 bits (150), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 64/224 (28%), Positives = 98/224 (43%), Gaps = 17/224 (7%)
Query: 336 NLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRL----RHRNLVQ 391
            L+G G FG+V      + G   A+K I        K+ VA  ++  R+    RH  L  
Sbjct: 15  KLLGKGTFGKVILVKEKATGRYYAMK-ILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTA 73
Query: 392 LHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEE 451
           L    +  D L  V +Y   G                 + D+       I  +L YLH E
Sbjct: 74  LKYSFQTHDRLCFVMEYANGGELFFHLSRERVF-----SEDRARFYGAEIVSALDYLHSE 128
Query: 452 CNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKI-YEHGANPQTTHIVGTLGYLAPELTRT 510
            N  VV+RD+K  N++LD   + K+ DFGL K   + GA  +     GT  YLAPE+   
Sbjct: 129 KN--VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKX--FCGTPEYLAPEVLED 184
Query: 511 GKATTSTDVYSYGILMLEVACGRRSI--EPQKAAAELLLVDWVK 552
                + D +  G++M E+ CGR     +  +   EL+L++ ++
Sbjct: 185 NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIR 228

>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of 3brb-Pp1 Length = 298

Iteration: 1
 Score = 62.4 bits (150), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 92/198 (46%), Gaps = 17/198 (8%)
Query: 335 QNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKE-FVAEIMSMGRLRHRNLVQ 391
           Q ++G G FG V        G E A+K I      Q+  KE  + E+  + +L H N+++
Sbjct: 37  QRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMK 96
Query: 392 LHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEE 451
           L+ +   +    LV +    G                       +I+  +   + Y+H+ 
Sbjct: 97  LYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA-----RIIRQVLSGITYMHK- 150
Query: 452 CNQRVVHRDVKPSNILLDTY---LNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELT 508
              ++VHRD+KP N+LL++     N ++ DFGL+  +E  A+ +    +GT  Y+APE+ 
Sbjct: 151 --NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE--ASKKMKDKIGTAYYIAPEVL 206
Query: 509 RTGKATTSTDVYSYGILM 526
             G      DV+S G+++
Sbjct: 207 H-GTYDEKCDVWSTGVIL 223

>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A Tetracyclic Pyridone Inhibitor (pyridone 6) Length = 304

Iteration: 1
 Score = 62.4 bits (150), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 92/198 (46%), Gaps = 20/198 (10%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGH----NSQQGM--KEFVAEIMSMGRLRHRNLVQ 391
           +GSG F  V +      G E A K I      +S++G+  +E   E+  +  +RH N++ 
Sbjct: 34  LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNIIT 93
Query: 392 LHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEE 451
           LH     + +++L+ + V  G                 T D+  + L  I   + YLH  
Sbjct: 94  LHDIFENKTDVVLILELVSGGE-----LFDFLAEKESLTEDEATQFLKQILDGVHYLH-- 146
Query: 452 CNQRVVHRDVKPSNI-LLDTYL---NAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
            ++R+ H D+KP NI LLD  +     KL DFG+A   E G   +  +I GT  ++APE+
Sbjct: 147 -SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGN--EFKNIFGTPEFVAPEI 203
Query: 508 TRTGKATTSTDVYSYGIL 525
                     D++S G++
Sbjct: 204 VNYEPLGLEADMWSIGVI 221

>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex With Staurosporine Length = 287

Iteration: 1
 Score = 62.0 bits (149), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 59/228 (25%), Positives = 105/228 (46%), Gaps = 14/228 (6%)
Query: 338 VGSGGFGRVYRGL--MPSLGLEVAIKRIGHNSQQG-MKEFVAEIMSMGRLRHRNLVQLHG 394
           +G G FG V +G+  M    ++VAIK +   +++   +E + E   M +L +  +V+L G
Sbjct: 18  LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 395 WCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQ 454
            C + + L+LV +    G                   +  +++ +G+     YL E   +
Sbjct: 78  VC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMK----YLEE---K 129
Query: 455 RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGT--LGYLAPELTRTGK 512
             VHRD+   N+LL     AK+ DFGL+K      +  T    G   L + APE     K
Sbjct: 130 NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRK 189
Query: 513 ATTSTDVYSYGILMLE-VACGRRSIEPQKAAAELLLVDWVKELHLEGE 559
            ++ +DV+SYG+ M E ++ G++  +  K    +  ++  K +    E
Sbjct: 190 FSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPE 237

>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase Domain Complexed With Amp-Pnp Length = 327

Iteration: 1
 Score = 62.0 bits (149), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 42/104 (40%), Positives = 60/104 (57%), Gaps = 12/104 (11%)
Query: 436 KILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLA-KIYEHGANPQTT 494
           KI +   ++L +L E  N +++HRD+KPSNILLD   N KL DFG++ ++ +  A    T
Sbjct: 129 KITLATVKALNHLKE--NLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAK---T 183
Query: 495 HIVGTLGYLAPE-----LTRTGKATTSTDVYSYGILMLEVACGR 533
              G   Y+APE      +R G    S DV+S GI + E+A GR
Sbjct: 184 RDAGCRPYMAPERIDPSASRQGYDVRS-DVWSLGITLYELATGR 226

>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes Length = 290

Iteration: 1
 Score = 62.0 bits (149), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 52/201 (25%), Positives = 93/201 (46%), Gaps = 16/201 (7%)
Query: 338 VGSGGFGRV----YRGLMPSLGLEVAIKRIGHNSQ-QGMKEFVAEIMSMGRLRHRNLVQL 392
           +G G FG+V    Y     + G +VA+K +   S    + +   EI  +  L H N+V+ 
Sbjct: 17  LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 393 HGWCRKQ--DELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHE 450
            G C +   + + L+ +++P+GS                   Q+ K  + I + + YL  
Sbjct: 77  KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKI----NLKQQLKYAVQICKGMDYLG- 131
Query: 451 ECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTH--IVGTLGYLAPELT 508
             +++ VHRD+   N+L+++    K+GDFGL K  E      T        + + APE  
Sbjct: 132 --SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECL 189
Query: 509 RTGKATTSTDVYSYGILMLEV 529
              K   ++DV+S+G+ + E+
Sbjct: 190 MQSKFYIASDVWSFGVTLHEL 210

>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain Length = 339

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 61/214 (28%), Positives = 91/214 (42%), Gaps = 17/214 (7%)
Query: 326 ASVT-KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN---SQQGMKEFVAEIMSM 381
           A VT   F    L+G G FG+V      + G   A+K +      ++  +   V E   +
Sbjct: 3   AKVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVL 62
Query: 382 GRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKIL-IG 440
              RH  L  L    +  D L  V +Y   G                   ++R +     
Sbjct: 63  QNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFT------EERARFYGAE 116
Query: 441 IAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKI-YEHGANPQTTHIVGT 499
           I  +L YLH   ++ VV+RD+K  N++LD   + K+ DFGL K     GA  +T    GT
Sbjct: 117 IVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT--FCGT 171
Query: 500 LGYLAPELTRTGKATTSTDVYSYGILMLEVACGR 533
             YLAPE+        + D +  G++M E+ CGR
Sbjct: 172 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 205

>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B Akt By Hydrophobic Motif Phosphorylation Length = 315

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 88/207 (42%), Gaps = 16/207 (7%)
Query: 332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN---SQQGMKEFVAEIMSMGRLRHRN 388
           F    L+G G FG+V      + G   A+K +      ++  +   V E   +   RH  
Sbjct: 7   FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKIL-IGIAQSLLY 447
           L  L    +  D L  V +Y   G                   ++R +     I  +L Y
Sbjct: 67  LTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFT------EERARFYGAEIVSALEY 120
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKI-YEHGANPQTTHIVGTLGYLAPE 506
           LH   ++ VV+RD+K  N++LD   + K+ DFGL K     GA  +T    GT  YLAPE
Sbjct: 121 LH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT--FCGTPEYLAPE 175
Query: 507 LTRTGKATTSTDVYSYGILMLEVACGR 533
           +        + D +  G++M E+ CGR
Sbjct: 176 VLEDNDYGRAVDWWGLGVVMYEMMCGR 202

>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 92/198 (46%), Gaps = 17/198 (8%)
Query: 335 QNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKE-FVAEIMSMGRLRHRNLVQ 391
           Q ++G G FG V        G E A+K I      Q+  KE  + E+  + +L H N+++
Sbjct: 54  QRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMK 113
Query: 392 LHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEE 451
           L+ +   +    LV +    G                       +I+  +   + Y+H+ 
Sbjct: 114 LYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA-----RIIRQVLSGITYMHK- 167
Query: 452 CNQRVVHRDVKPSNILLDTY---LNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELT 508
              ++VHRD+KP N+LL++     N ++ DFGL+  +E  A+ +    +GT  Y+APE+ 
Sbjct: 168 --NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE--ASKKMKDKIGTAYYIAPEVL 223
Query: 509 RTGKATTSTDVYSYGILM 526
             G      DV+S G+++
Sbjct: 224 H-GTYDEKCDVWSTGVIL 240

>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 92/198 (46%), Gaps = 17/198 (8%)
Query: 335 QNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKE-FVAEIMSMGRLRHRNLVQ 391
           Q ++G G FG V        G E A+K I      Q+  KE  + E+  + +L H N+++
Sbjct: 55  QRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMK 114
Query: 392 LHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEE 451
           L+ +   +    LV +    G                       +I+  +   + Y+H+ 
Sbjct: 115 LYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA-----RIIRQVLSGITYMHK- 168
Query: 452 CNQRVVHRDVKPSNILLDTY---LNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELT 508
              ++VHRD+KP N+LL++     N ++ DFGL+  +E  A+ +    +GT  Y+APE+ 
Sbjct: 169 --NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE--ASKKMKDKIGTAYYIAPEVL 224
Query: 509 RTGKATTSTDVYSYGILM 526
             G      DV+S G+++
Sbjct: 225 H-GTYDEKCDVWSTGVIL 241

>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain. Length = 317

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 53/212 (25%), Positives = 85/212 (40%), Gaps = 14/212 (6%)
Query: 330 KGFGEQNLVGSGGFGRVYR----GLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLR 385
           K +     +G GGF + Y             +V  K +     Q  K    EI     L 
Sbjct: 42  KRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEK-MSTEIAIHKSLD 100
Query: 386 HRNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSL 445
           + ++V  HG+    D + +V +     S                 +  R  I     Q +
Sbjct: 101 NPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI-----QGV 155
Query: 446 LYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAP 505
            YLH   N RV+HRD+K  N+ L+  ++ K+GDFGLA   E     +   + GT  Y+AP
Sbjct: 156 QYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGE-RKKDLCGTPNYIAP 211
Query: 506 ELTRTGKATTSTDVYSYGILMLEVACGRRSIE 537
           E+      +   D++S G ++  +  G+   E
Sbjct: 212 EVLCKKGHSFEVDIWSLGCILYTLLVGKPPFE 243

>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B (STK17B) Length = 327

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/196 (26%), Positives = 92/196 (46%), Gaps = 18/196 (9%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIK-----RIGHNSQQGMKEFVAEIMSMGRLRHRNLVQL 392
           +G G F  V + +  S G E A K     R G + +  +   +A ++ + +   R ++ L
Sbjct: 37  LGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIA-VLELAKSCPR-VINL 94
Query: 393 HGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEEC 452
           H       E++L+ +Y   G                 + +   +++  I + + YLH+  
Sbjct: 95  HEVYENTSEIILILEYAAGGEIFSLCLPELAEMV---SENDVIRLIKQILEGVYYLHQ-- 149
Query: 453 NQRVVHRDVKPSNILLDTYL---NAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTR 509
              +VH D+KP NILL +     + K+ DFG+++   H    +   I+GT  YLAPE+  
Sbjct: 150 -NNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHAC--ELREIMGTPEYLAPEILN 206
Query: 510 TGKATTSTDVYSYGIL 525
               TT+TD+++ GI+
Sbjct: 207 YDPITTATDMWNIGII 222

>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map Kinase Length = 360

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 91/207 (43%), Gaps = 19/207 (9%)
Query: 335 QNL--VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGM--KEFVAEIMSMGRLRHRN-- 388
           QNL  VGSG +G V        GL VA+K++    Q  +  K    E+  +  ++H N  
Sbjct: 25  QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 84
Query: 389 -LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
            L+ +    R  +E   VY      +                T D    ++  I + L Y
Sbjct: 85  GLLDVFTPARSLEEFNDVYLV----THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
           +H   +  ++HRD+KPSN+ ++     K+ DFGLA+      + + T  V T  Y APE+
Sbjct: 141 IH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEI 193
Query: 508 TRTGKATTST-DVYSYGILMLEVACGR 533
                    T D++S G +M E+  GR
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Compound 902 Length = 301

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 53/212 (25%), Positives = 85/212 (40%), Gaps = 14/212 (6%)
Query: 330 KGFGEQNLVGSGGFGRVYR----GLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLR 385
           K +     +G GGF + Y             +V  K +     Q  K    EI     L 
Sbjct: 26  KRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEK-MSTEIAIHKSLD 84
Query: 386 HRNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSL 445
           + ++V  HG+    D + +V +     S                 +  R  I     Q +
Sbjct: 85  NPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI-----QGV 139
Query: 446 LYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAP 505
            YLH   N RV+HRD+K  N+ L+  ++ K+GDFGLA   E     +   + GT  Y+AP
Sbjct: 140 QYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGE-RKKDLCGTPNYIAP 195
Query: 506 ELTRTGKATTSTDVYSYGILMLEVACGRRSIE 537
           E+      +   D++S G ++  +  G+   E
Sbjct: 196 EVLCKKGHSFEVDIWSLGCILYTLLVGKPPFE 227

>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Adp Length = 317

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 53/212 (25%), Positives = 85/212 (40%), Gaps = 14/212 (6%)
Query: 330 KGFGEQNLVGSGGFGRVYR----GLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLR 385
           K +     +G GGF + Y             +V  K +     Q  K    EI     L 
Sbjct: 42  KRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEK-MSTEIAIHKSLD 100
Query: 386 HRNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSL 445
           + ++V  HG+    D + +V +     S                 +  R  I     Q +
Sbjct: 101 NPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI-----QGV 155
Query: 446 LYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAP 505
            YLH   N RV+HRD+K  N+ L+  ++ K+GDFGLA   E     +   + GT  Y+AP
Sbjct: 156 QYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGE-RKKXLCGTPNYIAP 211
Query: 506 ELTRTGKATTSTDVYSYGILMLEVACGRRSIE 537
           E+      +   D++S G ++  +  G+   E
Sbjct: 212 EVLCKKGHSFEVDIWSLGCILYTLLVGKPPFE 243

>pdb|3SOA|A Chain A, Full-Length Human Camkii Length = 444

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 87/197 (44%), Gaps = 20/197 (10%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVA-----IKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQL 392
           +G G F  V R +    G E A      K++     Q + E  A I  +  L+H N+V+L
Sbjct: 19  LGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKL-EREARICRL--LKHPNIVRL 75
Query: 393 HGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEEC 452
           H    ++    L++D V  G                 +       +  I +++L+ H+  
Sbjct: 76  HDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADAS-----HCIQQILEAVLHCHQ-- 128
Query: 453 NQRVVHRDVKPSNILLDTYLNA---KLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTR 509
              VVHR++KP N+LL + L     KL DFGLA I   G         GT GYL+PE+ R
Sbjct: 129 -MGVVHRNLKPENLLLASKLKGAAVKLADFGLA-IEVEGEQQAWFGFAGTPGYLSPEVLR 186
Query: 510 TGKATTSTDVYSYGILM 526
                   D+++ G+++
Sbjct: 187 KDPYGKPVDLWACGVIL 203

>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex With Dp802 Length = 354

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 91/207 (43%), Gaps = 19/207 (9%)
Query: 335 QNL--VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGM--KEFVAEIMSMGRLRHRN-- 388
           QNL  VGSG +G V        GL VA+K++    Q  +  K    E+  +  ++H N  
Sbjct: 25  QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 84
Query: 389 -LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
            L+ +    R  +E   VY      +                T D    ++  I + L Y
Sbjct: 85  GLLDVFTPARSLEEFNDVYLV----THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
           +H   +  ++HRD+KPSN+ ++     K+ DFGLA+      + + T  V T  Y APE+
Sbjct: 141 IH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGXVATRWYRAPEI 193
Query: 508 TRTGKATTST-DVYSYGILMLEVACGR 533
                    T D++S G +M E+  GR
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In Complex With 4-[3-Methylsulfanylanilino]-6,7- Dimethoxyquinazoline Length = 360

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 91/207 (43%), Gaps = 19/207 (9%)
Query: 335 QNL--VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGM--KEFVAEIMSMGRLRHRN-- 388
           QNL  VGSG +G V        GL VA+K++    Q  +  K    E+  +  ++H N  
Sbjct: 25  QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 84
Query: 389 -LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
            L+ +    R  +E   VY      +                T D    ++  I + L Y
Sbjct: 85  GLLDVFTPARSLEEFNDVYLV----THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
           +H   +  ++HRD+KPSN+ ++     K+ DFGLA+      + + T  V T  Y APE+
Sbjct: 141 IH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEI 193
Query: 508 TRTGKATTST-DVYSYGILMLEVACGR 533
                    T D++S G +M E+  GR
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285 Length = 331

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 95/208 (45%), Gaps = 22/208 (10%)
Query: 332 FGEQNLVGSGGFGRVYRGLMPSLG----LEVAIKRIGH-NSQQGMKEFVAEIMSMGRLRH 386
           F +  ++GSG FG VY+GL    G    + VAIK +    S +  KE + E   M  + +
Sbjct: 21  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 387 RNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXX--XXXXXTWDQRYKILIGIAQS 444
            ++ +L G C     + L+   +P G                    W       + IA+ 
Sbjct: 81  PHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 133
Query: 445 LLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVG---TLG 501
           + YL    ++R+VHRD+   N+L+ T  + K+ DFG AK+   GA  +  H  G    + 
Sbjct: 134 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLL--GAEEKEYHAEGGKVPIK 188
Query: 502 YLAPELTRTGKATTSTDVYSYGILMLEV 529
           ++A E       T  +DV+SYG+ + E+
Sbjct: 189 WMALESILHRIYTHQSDVWSYGVTVWEL 216

>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine Length = 351

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 91/207 (43%), Gaps = 19/207 (9%)
Query: 335 QNL--VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGM--KEFVAEIMSMGRLRHRN-- 388
           QNL  VGSG +G V        GL VA+K++    Q  +  K    E+  +  ++H N  
Sbjct: 22  QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 81
Query: 389 -LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
            L+ +    R  +E   VY      +                T D    ++  I + L Y
Sbjct: 82  GLLDVFTPARSLEEFNDVYLV----THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 137
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
           +H   +  ++HRD+KPSN+ ++     K+ DFGLA+      + + T  V T  Y APE+
Sbjct: 138 IH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEI 190
Query: 508 TRTGKATTST-DVYSYGILMLEVACGR 533
                    T D++S G +M E+  GR
Sbjct: 191 MLNWMHYNQTVDIWSVGCIMAELLTGR 217

>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 92/207 (44%), Gaps = 19/207 (9%)
Query: 335 QNL--VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGM--KEFVAEIMSMGRLRHRN-- 388
           QNL  VGSG +G V        GL VA+K++    Q  +  K    E+  +  ++H N  
Sbjct: 25  QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 84
Query: 389 -LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
            L+ +    R  +E   VY      +                T D    ++  I + L Y
Sbjct: 85  GLLDVFTPARSLEEFNDVYLV----THLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKY 140
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
           +H   +  ++HRD+KPSN+ ++     K+ DFGLA+      + + T  V T  Y APE+
Sbjct: 141 IH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEI 193
Query: 508 TRTGKATTST-DVYSYGILMLEVACGR 533
                    T D++S G +M E+  GR
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|1IOA|A Chain A, Arcelin-5, A Lectin-Like Defense Protein From Phaseolus Vulgaris Length = 240

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 66/252 (26%), Positives = 110/252 (43%), Gaps = 39/252 (15%)
Query: 6   ADTTSFLYNGF-LHANLSLEGAAYISTSGILTVTNKSEG------LIGHALYPNPLRFKT 58
           A  TSF +  F     L L+G A IS+ G L +T            +G A Y +P++ K 
Sbjct: 1   ATETSFNFPNFHTDDKLILQGNATISSKGQLQLTGVGSNELPRVDSLGRAFYSDPIQIKD 60
Query: 59  SNKSVAIDFRTNFVFSILPKYPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTK 118
           SN   +  F TNF F I  K   +   GLAF ++  N P      +FLG+ N   +++ +
Sbjct: 61  SNNVAS--FNTNFTFIIRAKNQSISAYGLAFALVPVNSPPQ-KKQEFLGIFN---TNNPE 114
Query: 119 FSTRMLAVEFDIIQNTELIDINDNHVGIDXXXXXXXXXXXXXYYSGNNHRIPILL-RSGD 177
            + R +AV F+  +N   ID + N +                 Y+G    + I    S +
Sbjct: 115 PNARTVAVVFNTFKNR--IDFDKNFI-----KPYVNENCDFHKYNGEKTDVQITYDSSNN 167
Query: 178 PIQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGL---I 234
            ++ ++ ++  ++  +VS                 + L   +DE++  GFS ++GL    
Sbjct: 168 DLRVFLHFTVSQVKCSVSAT---------------VHLEKEVDEWVSVGFSPTSGLTEDT 212
Query: 235 TASHNVHGWSIS 246
           T +H+V  WS S
Sbjct: 213 TETHDVLSWSFS 224

>pdb|3HEC|A Chain A, P38 In Complex With Imatinib Length = 348

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 91/207 (43%), Gaps = 19/207 (9%)
Query: 335 QNL--VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGM--KEFVAEIMSMGRLRHRN-- 388
           QNL  VGSG +G V        GL VA+K++    Q  +  K    E+  +  ++H N  
Sbjct: 21  QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 80
Query: 389 -LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
            L+ +    R  +E   VY      +                T D    ++  I + L Y
Sbjct: 81  GLLDVFTPARSLEEFNDVYLV----THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 136
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
           +H   +  ++HRD+KPSN+ ++     K+ DFGLA+      + + T  V T  Y APE+
Sbjct: 137 IH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEI 189
Query: 508 TRTGKATTST-DVYSYGILMLEVACGR 533
                    T D++S G +M E+  GR
Sbjct: 190 MLNWMHYNQTVDIWSVGCIMAELLTGR 216

>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase Length = 367

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 91/207 (43%), Gaps = 19/207 (9%)
Query: 335 QNL--VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGM--KEFVAEIMSMGRLRHRN-- 388
           QNL  VGSG +G V        GL VA+K++    Q  +  K    E+  +  ++H N  
Sbjct: 32  QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 91
Query: 389 -LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
            L+ +    R  +E   VY      +                T D    ++  I + L Y
Sbjct: 92  GLLDVFTPARSLEEFNDVYLV----THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 147
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
           +H   +  ++HRD+KPSN+ ++     K+ DFGLA+      + + T  V T  Y APE+
Sbjct: 148 IH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEI 200
Query: 508 TRTGKATTST-DVYSYGILMLEVACGR 533
                    T D++S G +M E+  GR
Sbjct: 201 MLNWMHYNQTVDIWSVGCIMAELLTGR 227

>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 349

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 91/207 (43%), Gaps = 19/207 (9%)
Query: 335 QNL--VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGM--KEFVAEIMSMGRLRHRN-- 388
           QNL  VGSG +G V        GL VA+K++    Q  +  K    E+  +  ++H N  
Sbjct: 22  QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 81
Query: 389 -LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
            L+ +    R  +E   VY      +                T D    ++  I + L Y
Sbjct: 82  GLLDVFTPARSLEEFNDVYLV----THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 137
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
           +H   +  ++HRD+KPSN+ ++     K+ DFGLA+      + + T  V T  Y APE+
Sbjct: 138 IH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEI 190
Query: 508 TRTGKATTST-DVYSYGILMLEVACGR 533
                    T D++S G +M E+  GR
Sbjct: 191 MLNWMHYNQTVDIWSVGCIMAELLTGR 217

>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121 Length = 362

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 91/207 (43%), Gaps = 19/207 (9%)
Query: 335 QNL--VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGM--KEFVAEIMSMGRLRHRN-- 388
           QNL  VGSG +G V        GL VA+K++    Q  +  K    E+  +  ++H N  
Sbjct: 27  QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 86
Query: 389 -LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
            L+ +    R  +E   VY      +                T D    ++  I + L Y
Sbjct: 87  GLLDVFTPARSLEEFNDVYLV----THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 142
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
           +H   +  ++HRD+KPSN+ ++     K+ DFGLA+      + + T  V T  Y APE+
Sbjct: 143 IH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEI 195
Query: 508 TRTGKATTST-DVYSYGILMLEVACGR 533
                    T D++S G +M E+  GR
Sbjct: 196 MLNWMHYNQTVDIWSVGCIMAELLTGR 222

>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 7 Activated Mutant (S287d, T291d) Length = 318

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/117 (35%), Positives = 63/117 (53%), Gaps = 11/117 (9%)
Query: 436 KILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLA-KIYEHGANPQTT 494
           K+ + I ++L YL E+    V+HRDVKPSNILLD     KL DFG++ ++ +  A  ++ 
Sbjct: 128 KMTVAIVKALYYLKEK--HGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRS- 184
Query: 495 HIVGTLGYLAPELTRTGKATT-----STDVYSYGILMLEVACGRRSIEPQKAAAELL 546
              G   Y+APE       T        DV+S GI ++E+A G+   +  K   E+L
Sbjct: 185 --AGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVL 239

>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant Length = 360

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 91/207 (43%), Gaps = 19/207 (9%)
Query: 335 QNL--VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGM--KEFVAEIMSMGRLRHRN-- 388
           QNL  VGSG +G V        GL VA+K++    Q  +  K    E+  +  ++H N  
Sbjct: 25  QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 84
Query: 389 -LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
            L+ +    R  +E   VY      +                T D    ++  I + L Y
Sbjct: 85  GLLDVFTPARSLEEFNDVYLV----THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
           +H   +  ++HRD+KPSN+ ++     K+ DFGLA+      + + T  V T  Y APE+
Sbjct: 141 IH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEI 193
Query: 508 TRTGKATTST-DVYSYGILMLEVACGR 533
                    T D++S G +M E+  GR
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In Complex With Amp-Pnp Length = 327

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 95/208 (45%), Gaps = 22/208 (10%)
Query: 332 FGEQNLVGSGGFGRVYRGLMPSLG----LEVAIKRIGH-NSQQGMKEFVAEIMSMGRLRH 386
           F +  ++ SG FG VY+GL    G    + VAIK +    S +  KE + E   M  + +
Sbjct: 17  FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 387 RNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXX--XXXXXTWDQRYKILIGIAQS 444
            ++ +L G C     + L+   +P G                    W       + IA+ 
Sbjct: 77  PHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 129
Query: 445 LLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVG---TLG 501
           + YL    ++R+VHRD+   N+L+ T  + K+ DFGLAK+   GA  +  H  G    + 
Sbjct: 130 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGKVPIK 184
Query: 502 YLAPELTRTGKATTSTDVYSYGILMLEV 529
           ++A E       T  +DV+SYG+ + E+
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWEL 212

>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376 Length = 354

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 91/207 (43%), Gaps = 19/207 (9%)
Query: 335 QNL--VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGM--KEFVAEIMSMGRLRHRN-- 388
           QNL  VGSG +G V        GL VA+K++    Q  +  K    E+  +  ++H N  
Sbjct: 25  QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 84
Query: 389 -LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
            L+ +    R  +E   VY      +                T D    ++  I + L Y
Sbjct: 85  GLLDVFTPARSLEEFNDVYLV----THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
           +H   +  ++HRD+KPSN+ ++     K+ DFGLA+      + + T  V T  Y APE+
Sbjct: 141 IH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEI 193
Query: 508 TRTGKATTST-DVYSYGILMLEVACGR 533
                    T D++S G +M E+  GR
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 92/207 (44%), Gaps = 19/207 (9%)
Query: 335 QNL--VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGM--KEFVAEIMSMGRLRHRN-- 388
           QNL  VGSG +G V        GL VA+K++    Q  +  K    E+  +  ++H N  
Sbjct: 25  QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 84
Query: 389 -LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
            L+ +    R  +E   VY      +                T D    ++  I + L Y
Sbjct: 85  GLLDVFTPARSLEEFNDVYLV----THLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKY 140
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
           +H   +  ++HRD+KPSN+ ++     K+ DFGLA+      + + T  V T  Y APE+
Sbjct: 141 IH---SADIIHRDLKPSNLAVNEDXELKILDFGLAR----HTDDEMTGYVATRWYRAPEI 193
Query: 508 TRTGKATTST-DVYSYGILMLEVACGR 533
                    T D++S G +M E+  GR
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase Length = 362

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 91/207 (43%), Gaps = 19/207 (9%)
Query: 335 QNL--VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGM--KEFVAEIMSMGRLRHRN-- 388
           QNL  VGSG +G V        GL VA+K++    Q  +  K    E+  +  ++H N  
Sbjct: 27  QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 86
Query: 389 -LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
            L+ +    R  +E   VY      +                T D    ++  I + L Y
Sbjct: 87  GLLDVFTPARSLEEFNDVYLV----THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 142
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
           +H   +  ++HRD+KPSN+ ++     K+ DFGLA+      + + T  V T  Y APE+
Sbjct: 143 IH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEI 195
Query: 508 TRTGKATTST-DVYSYGILMLEVACGR 533
                    T D++S G +M E+  GR
Sbjct: 196 MLNWMHYNQTVDIWSVGCIMAELLTGR 222

>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715 Length = 362

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 91/207 (43%), Gaps = 19/207 (9%)
Query: 335 QNL--VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGM--KEFVAEIMSMGRLRHRN-- 388
           QNL  VGSG +G V        GL VA+K++    Q  +  K    E+  +  ++H N  
Sbjct: 27  QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 86
Query: 389 -LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
            L+ +    R  +E   VY      +                T D    ++  I + L Y
Sbjct: 87  GLLDVFTPARSLEEFNDVYLV----THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 142
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
           +H   +  ++HRD+KPSN+ ++     K+ DFGLA+      + + T  V T  Y APE+
Sbjct: 143 IH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEI 195
Query: 508 TRTGKATTST-DVYSYGILMLEVACGR 533
                    T D++S G +M E+  GR
Sbjct: 196 MLNWMHYNQTVDIWSVGCIMAELLTGR 222

>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A Dihydroquinazolinone Inhibitor Length = 366

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 91/207 (43%), Gaps = 19/207 (9%)
Query: 335 QNL--VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGM--KEFVAEIMSMGRLRHRN-- 388
           QNL  VGSG +G V        GL VA+K++    Q  +  K    E+  +  ++H N  
Sbjct: 31  QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 90
Query: 389 -LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
            L+ +    R  +E   VY      +                T D    ++  I + L Y
Sbjct: 91  GLLDVFTPARSLEEFNDVYLV----THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 146
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
           +H   +  ++HRD+KPSN+ ++     K+ DFGLA+      + + T  V T  Y APE+
Sbjct: 147 IH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEI 199
Query: 508 TRTGKATTST-DVYSYGILMLEVACGR 533
                    T D++S G +M E+  GR
Sbjct: 200 MLNWMHYNQTVDIWSVGCIMAELLTGR 226

>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant Length = 360

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 91/207 (43%), Gaps = 19/207 (9%)
Query: 335 QNL--VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGM--KEFVAEIMSMGRLRHRN-- 388
           QNL  VGSG +G V        GL VA+K++    Q  +  K    E+  +  ++H N  
Sbjct: 25  QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 84
Query: 389 -LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
            L+ +    R  +E   VY      +                T D    ++  I + L Y
Sbjct: 85  GLLDVFTPARSLEEFNDVYLV----THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
           +H   +  ++HRD+KPSN+ ++     K+ DFGLA+      + + T  V T  Y APE+
Sbjct: 141 IH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEI 193
Query: 508 TRTGKATTST-DVYSYGILMLEVACGR 533
                    T D++S G +M E+  GR
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant Length = 360

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 91/207 (43%), Gaps = 19/207 (9%)
Query: 335 QNL--VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGM--KEFVAEIMSMGRLRHRN-- 388
           QNL  VGSG +G V        GL VA+K++    Q  +  K    E+  +  ++H N  
Sbjct: 25  QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 84
Query: 389 -LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
            L+ +    R  +E   VY      +                T D    ++  I + L Y
Sbjct: 85  GLLDVFTPARSLEEFNDVYLV----THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
           +H   +  ++HRD+KPSN+ ++     K+ DFGLA+      + + T  V T  Y APE+
Sbjct: 141 IH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEI 193
Query: 508 TRTGKATTST-DVYSYGILMLEVACGR 533
                    T D++S G +M E+  GR
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955 Length = 350

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 91/207 (43%), Gaps = 19/207 (9%)
Query: 335 QNL--VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGM--KEFVAEIMSMGRLRHRN-- 388
           QNL  VGSG +G V        GL VA+K++    Q  +  K    E+  +  ++H N  
Sbjct: 23  QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 82
Query: 389 -LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
            L+ +    R  +E   VY      +                T D    ++  I + L Y
Sbjct: 83  GLLDVFTPARSLEEFNDVYLV----THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 138
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
           +H   +  ++HRD+KPSN+ ++     K+ DFGLA+      + + T  V T  Y APE+
Sbjct: 139 IH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEI 191
Query: 508 TRTGKATTST-DVYSYGILMLEVACGR 533
                    T D++S G +M E+  GR
Sbjct: 192 MLNWMHYNQTVDIWSVGCIMAELLTGR 218

>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Inactive Double Mutant With Selenomethionine Length = 327

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/198 (26%), Positives = 82/198 (41%), Gaps = 13/198 (6%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLRHRNLVQLHGW 395
           +G G F +V        G EVA+K I     +   +++   E+     L H N+V+L   
Sbjct: 22  IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEV 81
Query: 396 CRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQR 455
              +  L LV +Y   G                     R      I  ++ Y H++    
Sbjct: 82  IETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFR-----QIVSAVQYCHQKF--- 133
Query: 456 VVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKAT- 514
           +VHRD+K  N+LLD   N K+ DFG +  +  G   +     G   Y APEL +  K   
Sbjct: 134 IVHRDLKAENLLLDADXNIKIADFGFSNEFTFGN--KLDAFCGAPPYAAPELFQGKKYDG 191
Query: 515 TSTDVYSYGILMLEVACG 532
              DV+S G+++  +  G
Sbjct: 192 PEVDVWSLGVILYTLVSG 209

>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex Length = 366

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 90/207 (43%), Gaps = 19/207 (9%)
Query: 335 QNL--VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQ--GMKEFVAEIMSMGRLRHRN-- 388
           QNL  VGSG +G V        GL VA+K++    Q     K    E+  +  ++H N  
Sbjct: 31  QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 90
Query: 389 -LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
            L+ +    R  +E   VY      +                T D    ++  I + L Y
Sbjct: 91  GLLDVFTPARSLEEFNDVYLV----THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 146
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
           +H   +  ++HRD+KPSN+ ++     K+ DFGLA+      + + T  V T  Y APE+
Sbjct: 147 IH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEI 199
Query: 508 TRTGKATTST-DVYSYGILMLEVACGR 533
                    T D++S G +M E+  GR
Sbjct: 200 MLNWMHYNQTVDIWSVGCIMAELLTGR 226

>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE COMPLEX IN Solution Length = 359

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 91/207 (43%), Gaps = 19/207 (9%)
Query: 335 QNL--VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGM--KEFVAEIMSMGRLRHRN-- 388
           QNL  VGSG +G V        GL VA+K++    Q  +  K    E+  +  ++H N  
Sbjct: 30  QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 89
Query: 389 -LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
            L+ +    R  +E   VY      +                T D    ++  I + L Y
Sbjct: 90  GLLDVFTPARSLEEFNDVYLV----THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 145
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
           +H   +  ++HRD+KPSN+ ++     K+ DFGLA+      + + T  V T  Y APE+
Sbjct: 146 IH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEI 198
Query: 508 TRTGKATTST-DVYSYGILMLEVACGR 533
                    T D++S G +M E+  GR
Sbjct: 199 MLNWMHYNQTVDIWSVGCIMAELLTGR 225

>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea Length = 365

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 91/207 (43%), Gaps = 19/207 (9%)
Query: 335 QNL--VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGM--KEFVAEIMSMGRLRHRN-- 388
           QNL  VGSG +G V        GL VA+K++    Q  +  K    E+  +  ++H N  
Sbjct: 30  QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 89
Query: 389 -LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
            L+ +    R  +E   VY      +                T D    ++  I + L Y
Sbjct: 90  GLLDVFTPARSLEEFNDVYLV----THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 145
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
           +H   +  ++HRD+KPSN+ ++     K+ DFGLA+      + + T  V T  Y APE+
Sbjct: 146 IH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEI 198
Query: 508 TRTGKATTST-DVYSYGILMLEVACGR 533
                    T D++S G +M E+  GR
Sbjct: 199 MLNWMHYNQTVDIWSVGCIMAELLTGR 225

>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 359

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 91/207 (43%), Gaps = 19/207 (9%)
Query: 335 QNL--VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGM--KEFVAEIMSMGRLRHRN-- 388
           QNL  VGSG +G V        GL VA+K++    Q  +  K    E+  +  ++H N  
Sbjct: 24  QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 83
Query: 389 -LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
            L+ +    R  +E   VY      +                T D    ++  I + L Y
Sbjct: 84  GLLDVFTPARSLEEFNDVYLV----THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 139
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
           +H   +  ++HRD+KPSN+ ++     K+ DFGLA+      + + T  V T  Y APE+
Sbjct: 140 IH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEI 192
Query: 508 TRTGKATTST-DVYSYGILMLEVACGR 533
                    T D++S G +M E+  GR
Sbjct: 193 MLNWMHYNQTVDIWSVGCIMAELLTGR 219

>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole Inhibitor Length = 372

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 91/207 (43%), Gaps = 19/207 (9%)
Query: 335 QNL--VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGM--KEFVAEIMSMGRLRHRN-- 388
           QNL  VGSG +G V        GL VA+K++    Q  +  K    E+  +  ++H N  
Sbjct: 37  QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 96
Query: 389 -LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
            L+ +    R  +E   VY      +                T D    ++  I + L Y
Sbjct: 97  GLLDVFTPARSLEEFNDVYLV----THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 152
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
           +H   +  ++HRD+KPSN+ ++     K+ DFGLA+      + + T  V T  Y APE+
Sbjct: 153 IH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEI 205
Query: 508 TRTGKATTST-DVYSYGILMLEVACGR 533
                    T D++S G +M E+  GR
Sbjct: 206 MLNWMHYNQTVDIWSVGCIMAELLTGR 232

>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195 Length = 372

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 91/207 (43%), Gaps = 19/207 (9%)
Query: 335 QNL--VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGM--KEFVAEIMSMGRLRHRN-- 388
           QNL  VGSG +G V        GL VA+K++    Q  +  K    E+  +  ++H N  
Sbjct: 37  QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 96
Query: 389 -LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
            L+ +    R  +E   VY      +                T D    ++  I + L Y
Sbjct: 97  GLLDVFTPARSLEEFNDVYLV----THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 152
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
           +H   +  ++HRD+KPSN+ ++     K+ DFGLA+      + + T  V T  Y APE+
Sbjct: 153 IH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEI 205
Query: 508 TRTGKATTST-DVYSYGILMLEVACGR 533
                    T D++S G +M E+  GR
Sbjct: 206 MLNWMHYNQTVDIWSVGCIMAELLTGR 232

>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48 Length = 360

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 91/207 (43%), Gaps = 19/207 (9%)
Query: 335 QNL--VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGM--KEFVAEIMSMGRLRHRN-- 388
           QNL  VGSG +G V        GL VA+K++    Q  +  K    E+  +  ++H N  
Sbjct: 25  QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 84
Query: 389 -LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
            L+ +    R  +E   VY      +                T D    ++  I + L Y
Sbjct: 85  GLLDVFTPARSLEEFNDVYLV----THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
           +H   +  ++HRD+KPSN+ ++     K+ DFGLA+      + + T  V T  Y APE+
Sbjct: 141 IH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEI 193
Query: 508 TRTGKATTST-DVYSYGILMLEVACGR 533
                    T D++S G +M E+  GR
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In Complex With Aee788 Length = 327

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 95/208 (45%), Gaps = 22/208 (10%)
Query: 332 FGEQNLVGSGGFGRVYRGLMPSLG----LEVAIKRIGH-NSQQGMKEFVAEIMSMGRLRH 386
           F +  ++GSG FG VY+GL    G    + VAIK +    S +  KE + E   M  + +
Sbjct: 17  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 387 RNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXX--XXXXXTWDQRYKILIGIAQS 444
            ++ +L G C     + L+   +P G                    W       + IA+ 
Sbjct: 77  PHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 129
Query: 445 LLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVG---TLG 501
           + YL    ++R+VHRD+   N+L+ T  + K+ DFG AK+   GA  +  H  G    + 
Sbjct: 130 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLL--GAEEKEYHAEGGKVPIK 184
Query: 502 YLAPELTRTGKATTSTDVYSYGILMLEV 529
           ++A E       T  +DV+SYG+ + E+
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWEL 212

>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine Length = 365

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 91/207 (43%), Gaps = 19/207 (9%)
Query: 335 QNL--VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGM--KEFVAEIMSMGRLRHRN-- 388
           QNL  VGSG +G V        GL VA+K++    Q  +  K    E+  +  ++H N  
Sbjct: 30  QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 89
Query: 389 -LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
            L+ +    R  +E   VY      +                T D    ++  I + L Y
Sbjct: 90  GLLDVFTPARSLEEFNDVYLV----THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 145
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
           +H   +  ++HRD+KPSN+ ++     K+ DFGLA+      + + T  V T  Y APE+
Sbjct: 146 IH---SADIIHRDLKPSNLAVNEDXELKILDFGLAR----HTDDEMTGYVATRWYRAPEI 198
Query: 508 TRTGKATTST-DVYSYGILMLEVACGR 533
                    T D++S G +M E+  GR
Sbjct: 199 MLNWMHYNQTVDIWSVGCIMAELLTGR 225

>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain (G719sT790M) IN The Apo Form Length = 334

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 95/208 (45%), Gaps = 22/208 (10%)
Query: 332 FGEQNLVGSGGFGRVYRGLMPSLG----LEVAIKRIGH-NSQQGMKEFVAEIMSMGRLRH 386
           F +  ++ SG FG VY+GL    G    + VAIK +    S +  KE + E   M  + +
Sbjct: 24  FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 387 RNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXX--XXXXXTWDQRYKILIGIAQS 444
            ++ +L G C     + L+   +P G                    W       + IA+ 
Sbjct: 84  PHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 136
Query: 445 LLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVG---TLG 501
           + YL    ++R+VHRD+   N+L+ T  + K+ DFGLAK+   GA  +  H  G    + 
Sbjct: 137 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGKVPIK 191
Query: 502 YLAPELTRTGKATTSTDVYSYGILMLEV 529
           ++A E       T  +DV+SYG+ + E+
Sbjct: 192 WMALESILHRIYTHQSDVWSYGVTVWEL 219

>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Pyrrole-2- Carboxamide Inhibitor Length = 371

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 91/207 (43%), Gaps = 19/207 (9%)
Query: 335 QNL--VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGM--KEFVAEIMSMGRLRHRN-- 388
           QNL  VGSG +G V        GL VA+K++    Q  +  K    E+  +  ++H N  
Sbjct: 36  QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 95
Query: 389 -LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
            L+ +    R  +E   VY      +                T D    ++  I + L Y
Sbjct: 96  GLLDVFTPARSLEEFNDVYLV----THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 151
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
           +H   +  ++HRD+KPSN+ ++     K+ DFGLA+      + + T  V T  Y APE+
Sbjct: 152 IH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEI 204
Query: 508 TRTGKATTST-DVYSYGILMLEVACGR 533
                    T D++S G +M E+  GR
Sbjct: 205 MLNWMHYNQTVDIWSVGCIMAELLTGR 231

>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In Complex With Mig6 Peptide Length = 329

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 95/208 (45%), Gaps = 22/208 (10%)
Query: 332 FGEQNLVGSGGFGRVYRGLMPSLG----LEVAIKRIGH-NSQQGMKEFVAEIMSMGRLRH 386
           F +  ++GSG FG VY+GL    G    + VAIK +    S +  KE + E   M  + +
Sbjct: 19  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 387 RNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXX--XXXXXTWDQRYKILIGIAQS 444
            ++ +L G C     + L+   +P G                    W       + IA+ 
Sbjct: 79  PHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 131
Query: 445 LLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVG---TLG 501
           + YL    ++R+VHRD+   N+L+ T  + K+ DFG AK+   GA  +  H  G    + 
Sbjct: 132 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLL--GAEEKEYHAEGGKVPIK 186
Query: 502 YLAPELTRTGKATTSTDVYSYGILMLEV 529
           ++A E       T  +DV+SYG+ + E+
Sbjct: 187 WMALESILHRIYTHQSDVWSYGVTVWEL 214

>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499 Length = 372

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 91/207 (43%), Gaps = 19/207 (9%)
Query: 335 QNL--VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGM--KEFVAEIMSMGRLRHRN-- 388
           QNL  VGSG +G V        GL VA+K++    Q  +  K    E+  +  ++H N  
Sbjct: 37  QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENVI 96
Query: 389 -LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
            L+ +    R  +E   VY      +                T D    ++  I + L Y
Sbjct: 97  GLLDVFTPARSLEEFNDVYLV----THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 152
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
           +H   +  ++HRD+KPSN+ ++     K+ DFGLA+      + + T  V T  Y APE+
Sbjct: 153 IH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEI 205
Query: 508 TRTGKATTST-DVYSYGILMLEVACGR 533
                    T D++S G +M E+  GR
Sbjct: 206 MLNWMHYNQTVDIWSVGCIMAELLTGR 232

>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/215 (26%), Positives = 94/215 (43%), Gaps = 15/215 (6%)
Query: 330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRL----- 384
           + F    ++G G FG+V+           AIK +  +    M + V   M   R+     
Sbjct: 18  EDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVL-MDDDVECTMVEKRVLSLAW 76
Query: 385 RHRNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQS 444
            H  L  +    + ++ L  V +Y+  G                 T+    +I++G    
Sbjct: 77  EHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATF-YAAEIILG---- 131
Query: 445 LLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLA 504
           L +LH   ++ +V+RD+K  NILLD   + K+ DFG+ K    G + +T    GT  Y+A
Sbjct: 132 LQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLG-DAKTNEFCGTPDYIA 187
Query: 505 PELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQ 539
           PE+    K   S D +S+G+L+ E+  G+     Q
Sbjct: 188 PEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQ 222

>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 95/208 (45%), Gaps = 20/208 (9%)
Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRL-RHRNLVQLHGW 395
           LVG+G +G+VY+G     G   AIK +     +  +E   EI  + +   HRN+   +G 
Sbjct: 31  LVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDE-EEEIKQEINMLKKYSHHRNIATYYGA 89
Query: 396 CRKQ------DELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLH 449
             K+      D+L LV ++   GS                 W     I   I + L +LH
Sbjct: 90  FIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKE-EWIAY--ICREILRGLSHLH 146
Query: 450 EECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTR 509
           +    +V+HRD+K  N+LL      KL DFG++   +     + T  +GT  ++APE+  
Sbjct: 147 Q---HKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNT-FIGTPYWMAPEVIA 202
Query: 510 TGKATTST-----DVYSYGILMLEVACG 532
             +   +T     D++S GI  +E+A G
Sbjct: 203 CDENPDATYDFKSDLWSLGITAIEMAEG 230

>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995 Length = 379

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 91/207 (43%), Gaps = 19/207 (9%)
Query: 335 QNL--VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGM--KEFVAEIMSMGRLRHRN-- 388
           QNL  VGSG +G V        GL VA+K++    Q  +  K    E+  +  ++H N  
Sbjct: 44  QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 103
Query: 389 -LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
            L+ +    R  +E   VY      +                T D    ++  I + L Y
Sbjct: 104 GLLDVFTPARSLEEFNDVYLV----THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 159
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
           +H   +  ++HRD+KPSN+ ++     K+ DFGLA+      + + T  V T  Y APE+
Sbjct: 160 IH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEI 212
Query: 508 TRTGKATTST-DVYSYGILMLEVACGR 533
                    T D++S G +M E+  GR
Sbjct: 213 MLNWMHYNQTVDIWSVGCIMAELLTGR 239

>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1- Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3- Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide Length = 380

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 91/207 (43%), Gaps = 19/207 (9%)
Query: 335 QNL--VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGM--KEFVAEIMSMGRLRHRN-- 388
           QNL  VGSG +G V        GL VA+K++    Q  +  K    E+  +  ++H N  
Sbjct: 45  QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 104
Query: 389 -LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
            L+ +    R  +E   VY      +                T D    ++  I + L Y
Sbjct: 105 GLLDVFTPARSLEEFNDVYLV----THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 160
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
           +H   +  ++HRD+KPSN+ ++     K+ DFGLA+      + + T  V T  Y APE+
Sbjct: 161 IH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEI 213
Query: 508 TRTGKATTST-DVYSYGILMLEVACGR 533
                    T D++S G +M E+  GR
Sbjct: 214 MLNWMHYNQTVDIWSVGCIMAELLTGR 240

>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The Gefitinib/erlotinib Resistant Egfr Kinase Domain L858r+t790m Length = 329

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 95/208 (45%), Gaps = 22/208 (10%)
Query: 332 FGEQNLVGSGGFGRVYRGLMPSLG----LEVAIKRIGH-NSQQGMKEFVAEIMSMGRLRH 386
           F +  ++GSG FG VY+GL    G    + VAIK +    S +  KE + E   M  + +
Sbjct: 19  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 387 RNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXX--XXXXXTWDQRYKILIGIAQS 444
            ++ +L G C     + L+   +P G                    W       + IA+ 
Sbjct: 79  PHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 131
Query: 445 LLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVG---TLG 501
           + YL    ++R+VHRD+   N+L+ T  + K+ DFG AK+   GA  +  H  G    + 
Sbjct: 132 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLL--GAEEKEYHAEGGKVPIK 186
Query: 502 YLAPELTRTGKATTSTDVYSYGILMLEV 529
           ++A E       T  +DV+SYG+ + E+
Sbjct: 187 WMALESILHRIYTHQSDVWSYGVTVWEL 214

>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl Amide Inhibitor Length = 371

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 91/207 (43%), Gaps = 19/207 (9%)
Query: 335 QNL--VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGM--KEFVAEIMSMGRLRHRN-- 388
           QNL  VGSG +G V        GL VA+K++    Q  +  K    E+  +  ++H N  
Sbjct: 36  QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 95
Query: 389 -LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
            L+ +    R  +E   VY      +                T D    ++  I + L Y
Sbjct: 96  GLLDVFTPARSLEEFNDVYLV----THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 151
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
           +H   +  ++HRD+KPSN+ ++     K+ DFGLA+      + + T  V T  Y APE+
Sbjct: 152 IH---SADIIHRDLKPSNLAVNEDXELKILDFGLAR----HTDDEMTGYVATRWYRAPEI 204
Query: 508 TRTGKATTST-DVYSYGILMLEVACGR 533
                    T D++S G +M E+  GR
Sbjct: 205 MLNWMHYNQTVDIWSVGCIMAELLTGR 231

>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor Length = 383

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 91/207 (43%), Gaps = 19/207 (9%)
Query: 335 QNL--VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGM--KEFVAEIMSMGRLRHRN-- 388
           QNL  VGSG +G V        GL VA+K++    Q  +  K    E+  +  ++H N  
Sbjct: 48  QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 107
Query: 389 -LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
            L+ +    R  +E   VY      +                T D    ++  I + L Y
Sbjct: 108 GLLDVFTPARSLEEFNDVYLV----THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 163
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
           +H   +  ++HRD+KPSN+ ++     K+ DFGLA+      + + T  V T  Y APE+
Sbjct: 164 IH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEI 216
Query: 508 TRTGKATTST-DVYSYGILMLEVACGR 533
                    T D++S G +M E+  GR
Sbjct: 217 MLNWMHYNQTVDIWSVGCIMAELLTGR 243

>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic Mutant L858r Egfr Kinase Domain Length = 329

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 95/208 (45%), Gaps = 22/208 (10%)
Query: 332 FGEQNLVGSGGFGRVYRGLMPSLG----LEVAIKRIGH-NSQQGMKEFVAEIMSMGRLRH 386
           F +  ++GSG FG VY+GL    G    + VAIK +    S +  KE + E   M  + +
Sbjct: 19  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 387 RNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXX--XXXXXTWDQRYKILIGIAQS 444
            ++ +L G C     + L+   +P G                    W       + IA+ 
Sbjct: 79  PHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 131
Query: 445 LLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVG---TLG 501
           + YL    ++R+VHRD+   N+L+ T  + K+ DFG AK+   GA  +  H  G    + 
Sbjct: 132 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLL--GAEEKEYHAEGGKVPIK 186
Query: 502 YLAPELTRTGKATTSTDVYSYGILMLEV 529
           ++A E       T  +DV+SYG+ + E+
Sbjct: 187 WMALESILHRIYTHQSDVWSYGVTVWEL 214

>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And Kinase Domains Length = 361

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 95/208 (45%), Gaps = 22/208 (10%)
Query: 332 FGEQNLVGSGGFGRVYRGLMPSLG----LEVAIKRIGH-NSQQGMKEFVAEIMSMGRLRH 386
           F +  ++GSG FG VY+GL    G    + VAI  +    S +  KE + E   M  + +
Sbjct: 51  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDN 110
Query: 387 RNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXX--XXXXXTWDQRYKILIGIAQS 444
            ++ +L G C     + L+   +P G                    W       + IA+ 
Sbjct: 111 PHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 163
Query: 445 LLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVG---TLG 501
           + YL    ++R+VHRD+   N+L+ T  + K+ DFGLAK+   GA  +  H  G    + 
Sbjct: 164 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGKVPIK 218
Query: 502 YLAPELTRTGKATTSTDVYSYGILMLEV 529
           ++A E       T  +DV+SYG+ + E+
Sbjct: 219 WMALESILHRIYTHQSDVWSYGVTVWEL 246

>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s) Length = 334

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 95/208 (45%), Gaps = 22/208 (10%)
Query: 332 FGEQNLVGSGGFGRVYRGLMPSLG----LEVAIKRIGH-NSQQGMKEFVAEIMSMGRLRH 386
           F +  ++ SG FG VY+GL    G    + VAIK +    S +  KE + E   M  + +
Sbjct: 24  FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 387 RNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXX--XXXXXTWDQRYKILIGIAQS 444
            ++ +L G C     + L+   +P G                    W       + IA+ 
Sbjct: 84  PHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 136
Query: 445 LLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVG---TLG 501
           + YL    ++R+VHRD+   N+L+ T  + K+ DFGLAK+   GA  +  H  G    + 
Sbjct: 137 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGKVPIK 191
Query: 502 YLAPELTRTGKATTSTDVYSYGILMLEV 529
           ++A E       T  +DV+SYG+ + E+
Sbjct: 192 WMALESILHRIYTHQSDVWSYGVTVWEL 219

>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In Complex With Amppnp Length = 334

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 95/208 (45%), Gaps = 22/208 (10%)
Query: 332 FGEQNLVGSGGFGRVYRGLMPSLG----LEVAIKRIGH-NSQQGMKEFVAEIMSMGRLRH 386
           F +  ++GSG FG VY+GL    G    + VAIK +    S +  KE + E   M  + +
Sbjct: 24  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 387 RNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXX--XXXXXTWDQRYKILIGIAQS 444
            ++ +L G C     + L+   +P G                    W       + IA+ 
Sbjct: 84  PHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 136
Query: 445 LLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVG---TLG 501
           + YL    ++R+VHRD+   N+L+ T  + K+ DFG AK+   GA  +  H  G    + 
Sbjct: 137 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLL--GAEEKEYHAEGGKVPIK 191
Query: 502 YLAPELTRTGKATTSTDVYSYGILMLEV 529
           ++A E       T  +DV+SYG+ + E+
Sbjct: 192 WMALESILHRIYTHQSDVWSYGVTVWEL 219

>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2 Length = 484

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 90/198 (45%), Gaps = 17/198 (8%)
Query: 335 QNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKE-FVAEIMSMGRLRHRNLVQ 391
           Q ++G G FG V        G E A+K I      Q+  KE  + E+  + +L H N+ +
Sbjct: 31  QRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXK 90
Query: 392 LHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEE 451
           L+ +   +    LV +    G                       +I+  +   + Y H+ 
Sbjct: 91  LYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA-----RIIRQVLSGITYXHK- 144
Query: 452 CNQRVVHRDVKPSNILLDTY---LNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELT 508
              ++VHRD+KP N+LL++     N ++ DFGL+  +E  A+ +    +GT  Y+APE+ 
Sbjct: 145 --NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE--ASKKXKDKIGTAYYIAPEVL 200
Query: 509 RTGKATTSTDVYSYGILM 526
             G      DV+S G+++
Sbjct: 201 H-GTYDEKCDVWSTGVIL 217

>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 91/207 (43%), Gaps = 19/207 (9%)
Query: 335 QNL--VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGM--KEFVAEIMSMGRLRHRN-- 388
           QNL  VGSG +G V        GL VA+K++    Q  +  K    E+  +  ++H N  
Sbjct: 27  QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 86
Query: 389 -LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
            L+ +    R  +E   VY      +                T D    ++  I + L Y
Sbjct: 87  GLLDVFTPARSLEEFNDVYLV----THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 142
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
           +H   +  ++HRD+KPSN+ ++     K+ DFGLA+      + + T  V T  Y APE+
Sbjct: 143 IH---SADIIHRDLKPSNLAVNEDSELKILDFGLAR----HTDDEMTGYVATRWYRAPEI 195
Query: 508 TRTGKATTST-DVYSYGILMLEVACGR 533
                    T D++S G +M E+  GR
Sbjct: 196 MLNWMHYNQTVDIWSVGCIMAELLTGR 222

>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B (pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3 Peptide Length = 337

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 87/208 (41%), Gaps = 18/208 (8%)
Query: 332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN---SQQGMKEFVAEIMSMGRLRHRN 388
           F    L+G G FG+V      + G   A+K +      ++  +   V E   +   RH  
Sbjct: 7   FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKIL-IGIAQSLLY 447
           L  L    +  D L  V +Y   G                   ++R +     I  +L Y
Sbjct: 67  LTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFT------EERARFYGAEIVSALEY 120
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTT--HIVGTLGYLAP 505
           LH   ++ VV+RD+K  N++LD   + K+ DFGL K    G +   T     GT  YLAP
Sbjct: 121 LH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKXFCGTPEYLAP 174
Query: 506 ELTRTGKATTSTDVYSYGILMLEVACGR 533
           E+        + D +  G++M E+ CGR
Sbjct: 175 EVLEDNDYGRAVDWWGLGVVMYEMMCGR 202

>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195 Length = 365

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 91/207 (43%), Gaps = 19/207 (9%)
Query: 335 QNL--VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGM--KEFVAEIMSMGRLRHRN-- 388
           QNL  +GSG +G V        GL VA+K++    Q  +  K    E+  +  ++H N  
Sbjct: 30  QNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 89
Query: 389 -LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
            L+ +    R  +E   VY      +                T D    ++  I + L Y
Sbjct: 90  GLLDVFTPARSLEEFNDVYLV----THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 145
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
           +H   +  ++HRD+KPSN+ ++     K+ DFGLA+      + + T  V T  Y APE+
Sbjct: 146 IH---SADIIHRDLKPSNLAVNEDXELKILDFGLAR----HTDDEMTGYVATRWYRAPEI 198
Query: 508 TRTGKATTST-DVYSYGILMLEVACGR 533
                    T D++S G +M E+  GR
Sbjct: 199 MLNWMHYNQTVDIWSVGCIMAELLTGR 225

>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40 Length = 321

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 93/203 (45%), Gaps = 22/203 (10%)
Query: 333 GEQNLVGSGGFGRVYRGLMPSLGLEVAIK----RIGHNSQQGM--KEFVAEIMSMGRLRH 386
           GE+  +GSG F  V +    S GLE A K    R    S++G+  +E   E+  + ++ H
Sbjct: 17  GEE--LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLH 74
Query: 387 RNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLL 446
            N++ LH     + +++L+ + V  G                 T       +  I   + 
Sbjct: 75  HNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT-----SFIKQILDGVN 129
Query: 447 YLHEECNQRVVHRDVKPSNI-LLDTYL---NAKLGDFGLAKIYEHGANPQTTHIVGTLGY 502
           YLH    +++ H D+KP NI LLD  +   + KL DFGLA   E G   +  +I GT  +
Sbjct: 130 YLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV--EFKNIFGTPEF 184
Query: 503 LAPELTRTGKATTSTDVYSYGIL 525
           +APE+          D++S G++
Sbjct: 185 VAPEIVNYEPLGLEADMWSIGVI 207

>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 70/295 (23%), Positives = 124/295 (42%), Gaps = 52/295 (17%)
Query: 335 QNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRL-----RHRNL 389
             ++G G FG+V+           AIK +  +    M + V   M   R+      H  L
Sbjct: 22  HKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVL-MDDDVECTMVEKRVLSLAWEHPFL 80
Query: 390 VQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLH 449
             +    + ++ L  V +Y+  G                 T+    +I++G    L +LH
Sbjct: 81  THMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATF-YAAEIILG----LQFLH 135
Query: 450 EECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTR 509
              ++ +V+RD+K  NILLD   + K+ DFG+ K    G + +T    GT  Y+APE+  
Sbjct: 136 ---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLG-DAKTNXFCGTPDYIAPEILL 191
Query: 510 TGKATTSTDVYSYGILMLEVACGRRSIEPQ---------------------KAAAELLLV 548
             K   S D +S+G+L+ E+  G+     Q                     K A +LL+ 
Sbjct: 192 GQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKEAKDLLVK 251
Query: 549 DWVKE----LHLEGEITQ-AIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMR 598
            +V+E    L + G+I Q  + + +++ +L   E+           +P +RP ++
Sbjct: 252 LFVREPEKRLGVRGDIRQHPLFREINWEELERKEI-----------DPPFRPKVK 295

>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone Inhibitor Length = 335

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 58/215 (26%), Positives = 94/215 (43%), Gaps = 30/215 (13%)
Query: 338 VGSGGFGRVYRGLMPSLG-----LEVAIKRIGHNSQQGMKE-FVAEIMSMGRL-RHRNLV 390
           +G+G FG+V       LG     L+VA+K +   +    KE  ++E+  M  L +H N+V
Sbjct: 54  LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 391 QLHGWCRKQDELLLVYDYVPNGSXXXXXXXX-----------XXXXXXXXTWDQRYKILI 439
            L G C     +L++ +Y   G                            +         
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSS 173
Query: 440 GIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVG- 498
            +AQ + +L    ++  +HRDV   N+LL     AK+GDFGLA+   + +N    +IV  
Sbjct: 174 QVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN----YIVKG 226
Query: 499 ----TLGYLAPELTRTGKATTSTDVYSYGILMLEV 529
                + ++APE       T  +DV+SYGIL+ E+
Sbjct: 227 NARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI 261

>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d With Gsk3 Peptide And Amp-Pnp Length = 336

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 87/208 (41%), Gaps = 18/208 (8%)
Query: 332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN---SQQGMKEFVAEIMSMGRLRHRN 388
           F    L+G G FG+V      + G   A+K +      ++  +   V E   +   RH  
Sbjct: 7   FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKIL-IGIAQSLLY 447
           L  L    +  D L  V +Y   G                   ++R +     I  +L Y
Sbjct: 67  LTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFT------EERARFYGAEIVSALEY 120
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTT--HIVGTLGYLAP 505
           LH   ++ VV+RD+K  N++LD   + K+ DFGL K    G +   T     GT  YLAP
Sbjct: 121 LH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKXFCGTPEYLAP 174
Query: 506 ELTRTGKATTSTDVYSYGILMLEVACGR 533
           E+        + D +  G++M E+ CGR
Sbjct: 175 EVLEDNDYGRAVDWWGLGVVMYEMMCGR 202

>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human Tgf- Beta Type I Receptor Length = 303

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 60/215 (27%), Positives = 92/215 (42%), Gaps = 29/215 (13%)
Query: 335 QNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQG-MKEFVAEIMSMGRLRHRNLVQLH 393
           Q  +G G FG V+RG     G EVA+K      ++   +E  AEI     LRH N++   
Sbjct: 8   QESIGKGRFGEVWRGKWR--GEEVAVKIFSSREERSWFRE--AEIYQTVMLRHENILGFI 63
Query: 394 GWCRKQD----ELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLH 449
               K +    +L LV DY  +GS                T +   K+ +  A  L +LH
Sbjct: 64  AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTV------TVEGMIKLALSTASGLAHLH 117
Query: 450 EEC-----NQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANP---QTTHIVGTLG 501
            E         + HRD+K  NIL+       + D GLA  ++   +       H VGT  
Sbjct: 118 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKR 177
Query: 502 YLAPEL------TRTGKATTSTDVYSYGILMLEVA 530
           Y+APE+       +  ++    D+Y+ G++  E+A
Sbjct: 178 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 212

>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2 Length = 365

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/226 (23%), Positives = 98/226 (43%), Gaps = 25/226 (11%)
Query: 322 YAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSM 381
           +A      + +  ++++G G    V R +  + G E A+K +   +++   E + E+   
Sbjct: 86  WAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREA 145
Query: 382 GR-----LR----HRNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWD 432
            R     LR    H +++ L         + LV+D +  G                 +  
Sbjct: 146 TRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVAL-----SEK 200
Query: 433 QRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQ 492
           +   I+  + +++ +LH      +VHRD+KP NILLD  +  +L DFG +   E G   +
Sbjct: 201 ETRSIMRSLLEAVSFLH---ANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGE--K 255
Query: 493 TTHIVGTLGYLAPELTRTGKATT------STDVYSYGILMLEVACG 532
              + GT GYLAPE+ +     T        D+++ G+++  +  G
Sbjct: 256 LRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAG 301

>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A Dihydroquinolinone Length = 366

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 91/207 (43%), Gaps = 19/207 (9%)
Query: 335 QNL--VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGM--KEFVAEIMSMGRLRHRN-- 388
           QNL  VGSG +G V        GL VA+K++    Q  +  K    E+  +  ++H N  
Sbjct: 31  QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 90
Query: 389 -LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
            L+ +    R  +E   VY      +                T D    ++  I + L Y
Sbjct: 91  GLLDVFTPARSLEEFNDVYLV----THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 146
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
           +H   +  ++HRD+KPSN+ ++     K+ DFGLA+      + + T  V T  Y APE+
Sbjct: 147 IH---SADIIHRDLKPSNLAVNEDSELKILDFGLAR----HTDDEMTGYVATRWYRAPEI 199
Query: 508 TRTGKATTST-DVYSYGILMLEVACGR 533
                    T D++S G +M E+  GR
Sbjct: 200 MLNWMHYNQTVDIWSVGCIMAELLTGR 226

>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 342

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 87/208 (41%), Gaps = 18/208 (8%)
Query: 332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN---SQQGMKEFVAEIMSMGRLRHRN 388
           F    L+G G FG+V      + G   A+K +      ++  +   V E   +   RH  
Sbjct: 12  FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 71
Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKIL-IGIAQSLLY 447
           L  L    +  D L  V +Y   G                   ++R +     I  +L Y
Sbjct: 72  LTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFT------EERARFYGAEIVSALEY 125
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTT--HIVGTLGYLAP 505
           LH   ++ VV+RD+K  N++LD   + K+ DFGL K    G +   T     GT  YLAP
Sbjct: 126 LH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKXFCGTPEYLAP 179
Query: 506 ELTRTGKATTSTDVYSYGILMLEVACGR 533
           E+        + D +  G++M E+ CGR
Sbjct: 180 EVLEDNDYGRAVDWWGLGVVMYEMMCGR 207

>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I Tgf-Beta Receptor In Complex With Fkbp12 Length = 342

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 60/215 (27%), Positives = 92/215 (42%), Gaps = 29/215 (13%)
Query: 335 QNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQG-MKEFVAEIMSMGRLRHRNLVQLH 393
           Q  +G G FG V+RG     G EVA+K      ++   +E  AEI     LRH N++   
Sbjct: 47  QESIGKGRFGEVWRGKWR--GEEVAVKIFSSREERSWFRE--AEIYQTVMLRHENILGFI 102
Query: 394 GWCRKQD----ELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLH 449
               K +    +L LV DY  +GS                T +   K+ +  A  L +LH
Sbjct: 103 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTV------TVEGMIKLALSTASGLAHLH 156
Query: 450 EEC-----NQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANP---QTTHIVGTLG 501
            E         + HRD+K  NIL+       + D GLA  ++   +       H VGT  
Sbjct: 157 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKR 216
Query: 502 YLAPEL------TRTGKATTSTDVYSYGILMLEVA 530
           Y+APE+       +  ++    D+Y+ G++  E+A
Sbjct: 217 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 251

>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The Autoinhibited Conformation Of A Human Death-associated Protein Kinase Length = 321

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 93/203 (45%), Gaps = 22/203 (10%)
Query: 333 GEQNLVGSGGFGRVYRGLMPSLGLEVAIK----RIGHNSQQGM--KEFVAEIMSMGRLRH 386
           GE+  +GSG F  V +    S GLE A K    R    S++G+  +E   E+  + ++ H
Sbjct: 17  GEE--LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLH 74
Query: 387 RNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLL 446
            N++ LH     + +++L+ + V  G                 T       +  I   + 
Sbjct: 75  HNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT-----SFIKQILDGVN 129
Query: 447 YLHEECNQRVVHRDVKPSNI-LLDTYL---NAKLGDFGLAKIYEHGANPQTTHIVGTLGY 502
           YLH    +++ H D+KP NI LLD  +   + KL DFGLA   E G   +  +I GT  +
Sbjct: 130 YLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV--EFKNIFGTPEF 184
Query: 503 LAPELTRTGKATTSTDVYSYGIL 525
           +APE+          D++S G++
Sbjct: 185 VAPEIVNYEPLGLEADMWSIGVI 207

>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70 Length = 613

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 58/229 (25%), Positives = 105/229 (45%), Gaps = 14/229 (6%)
Query: 338 VGSGGFGRVYRGL--MPSLGLEVAIKRIGHNSQQG-MKEFVAEIMSMGRLRHRNLVQLHG 394
           +G G FG V +G+  M    ++VAIK +   +++   +E + E   M +L +  +V+L G
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 403
Query: 395 WCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQ 454
            C + + L+LV +    G                   +  +++ +G+     YL E   +
Sbjct: 404 VC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMK----YLEE---K 455
Query: 455 RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGT--LGYLAPELTRTGK 512
             VHR++   N+LL     AK+ DFGL+K      +  T    G   L + APE     K
Sbjct: 456 NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRK 515
Query: 513 ATTSTDVYSYGILMLE-VACGRRSIEPQKAAAELLLVDWVKELHLEGEI 560
            ++ +DV+SYG+ M E ++ G++  +  K    +  ++  K +    E 
Sbjct: 516 FSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPEC 564

>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 3 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 93/203 (45%), Gaps = 22/203 (10%)
Query: 333 GEQNLVGSGGFGRVYRGLMPSLGLEVAIK----RIGHNSQQGM--KEFVAEIMSMGRLRH 386
           GE+  +GSG F  V +    S GLE A K    R    S++G+  +E   E+  + ++ H
Sbjct: 17  GEE--LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLH 74
Query: 387 RNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLL 446
            N++ LH     + +++L+ + V  G                 T       +  I   + 
Sbjct: 75  HNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT-----SFIKQILDGVN 129
Query: 447 YLHEECNQRVVHRDVKPSNI-LLDTYL---NAKLGDFGLAKIYEHGANPQTTHIVGTLGY 502
           YLH    +++ H D+KP NI LLD  +   + KL DFGLA   E G   +  +I GT  +
Sbjct: 130 YLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV--EFKNIFGTPEF 184
Query: 503 LAPELTRTGKATTSTDVYSYGIL 525
           +APE+          D++S G++
Sbjct: 185 VAPEIVNYEPLGLEADMWSIGVI 207

>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071 Length = 360

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/146 (30%), Positives = 69/146 (47%), Gaps = 11/146 (7%)
Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYL 448
           L QLH   +  D L  V +YV  G                  +   Y   I I   L +L
Sbjct: 82  LTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVF---YAAEISIG--LFFL 136
Query: 449 HEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTT-HIVGTLGYLAPEL 507
           H+   + +++RD+K  N++LD+  + K+ DFG+ K  EH  +  TT    GT  Y+APE+
Sbjct: 137 HK---RGIIYRDLKLDNVMLDSEGHIKIADFGMCK--EHMMDGVTTREFCGTPDYIAPEI 191
Query: 508 TRTGKATTSTDVYSYGILMLEVACGR 533
                   S D ++YG+L+ E+  G+
Sbjct: 192 IAYQPYGKSVDWWAYGVLLYEMLAGQ 217

>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1 Kinase Length = 288

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 90/198 (45%), Gaps = 20/198 (10%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIK----RIGHNSQQGM--KEFVAEIMSMGRLRHRNLVQ 391
           +GSG F  V +    S GLE A K    R    S++G+  +E   E+  + ++ H N++ 
Sbjct: 20  LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 392 LHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEE 451
           LH     + +++L+ + V  G                 T       +  I   + YLH  
Sbjct: 80  LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT-----SFIKQILDGVNYLH-- 132
Query: 452 CNQRVVHRDVKPSNI-LLDTYL---NAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
             +++ H D+KP NI LLD  +   + KL DFGLA   E G   +  +I GT  ++APE+
Sbjct: 133 -TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV--EFKNIFGTPEFVAPEI 189
Query: 508 TRTGKATTSTDVYSYGIL 525
                     D++S G++
Sbjct: 190 VNYEPLGLEADMWSIGVI 207

>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 8 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 93/203 (45%), Gaps = 22/203 (10%)
Query: 333 GEQNLVGSGGFGRVYRGLMPSLGLEVAIK----RIGHNSQQGM--KEFVAEIMSMGRLRH 386
           GE+  +GSG F  V +    S GLE A K    R    S++G+  +E   E+  + ++ H
Sbjct: 17  GEE--LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLH 74
Query: 387 RNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLL 446
            N++ LH     + +++L+ + V  G                 T       +  I   + 
Sbjct: 75  HNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT-----SFIKQILDGVN 129
Query: 447 YLHEECNQRVVHRDVKPSNI-LLDTYL---NAKLGDFGLAKIYEHGANPQTTHIVGTLGY 502
           YLH    +++ H D+KP NI LLD  +   + KL DFGLA   E G   +  +I GT  +
Sbjct: 130 YLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV--EFKNIFGTPEF 184
Query: 503 LAPELTRTGKATTSTDVYSYGIL 525
           +APE+          D++S G++
Sbjct: 185 VAPEIVNYEPLGLEADMWSIGVI 207

>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex With Atp- Competitive Inhibitors Length = 335

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 87/208 (41%), Gaps = 18/208 (8%)
Query: 332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN---SQQGMKEFVAEIMSMGRLRHRN 388
           F    L+G G FG+V      + G   A+K +      ++  +   V E   +   RH  
Sbjct: 7   FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKIL-IGIAQSLLY 447
           L  L    +  D L  V +Y   G                   ++R +     I  +L Y
Sbjct: 67  LTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFT------EERARFYGAEIVSALEY 120
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTT--HIVGTLGYLAP 505
           LH   ++ VV+RD+K  N++LD   + K+ DFGL K    G +   T     GT  YLAP
Sbjct: 121 LH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKXFCGTPEYLAP 174
Query: 506 ELTRTGKATTSTDVYSYGILMLEVACGR 533
           E+        + D +  G++M E+ CGR
Sbjct: 175 EVLEDNDYGRAVDWWGLGVVMYEMMCGR 202

>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp Site Inhibitor Length = 301

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 60/215 (27%), Positives = 92/215 (42%), Gaps = 29/215 (13%)
Query: 335 QNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQG-MKEFVAEIMSMGRLRHRNLVQLH 393
           Q  +G G FG V+RG     G EVA+K      ++   +E  AEI     LRH N++   
Sbjct: 9   QESIGKGRFGEVWRGKWR--GEEVAVKIFSSREERSWFRE--AEIYQTVMLRHENILGFI 64
Query: 394 GWCRKQD----ELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLH 449
               K +    +L LV DY  +GS                T +   K+ +  A  L +LH
Sbjct: 65  AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTV------TVEGMIKLALSTASGLAHLH 118
Query: 450 EEC-----NQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANP---QTTHIVGTLG 501
            E         + HRD+K  NIL+       + D GLA  ++   +       H VGT  
Sbjct: 119 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKR 178
Query: 502 YLAPEL------TRTGKATTSTDVYSYGILMLEVA 530
           Y+APE+       +  ++    D+Y+ G++  E+A
Sbjct: 179 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 213

>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1) Length = 311

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/88 (44%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 444 SLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYL 503
           +L +LH   +Q +VH DVKP+NI L      KLGDFGL  + E G         G   Y+
Sbjct: 169 ALAHLH---SQGLVHLDVKPANIFLGPRGRCKLGDFGL--LVELGTAGAGEVQEGDPRYM 223
Query: 504 APELTRTGKATTSTDVYSYGILMLEVAC 531
           APEL + G   T+ DV+S G+ +LEVAC
Sbjct: 224 APELLQ-GSYGTAADVFSLGLTILEVAC 250

>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp Analog And Substrate Peptide Length = 334

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 50/213 (23%), Positives = 95/213 (44%), Gaps = 24/213 (11%)
Query: 338 VGSGGFGRVYRGLM-------PSLGLEVAIKRIGHN-SQQGMKEFVAEIMSMGRL-RHRN 388
           +G G FG+V            P   + VA+K +  + +++ + + V+E+  M  + +H+N
Sbjct: 43  LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXX-----------XXXXXXXTWDQRYKI 437
           ++ L G C +   L ++ +Y   G+                           T+      
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSC 162
Query: 438 LIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IYEHGANPQTTHI 496
              +A+ + YL    +Q+ +HRD+   N+L+      K+ DFGLA+ I       +TT+ 
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 497 VGTLGYLAPELTRTGKATTSTDVYSYGILMLEV 529
              + ++APE       T  +DV+S+G+LM E+
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252

>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major Length = 360

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 63/224 (28%), Positives = 99/224 (44%), Gaps = 17/224 (7%)
Query: 332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIM-SMGRLRHRNLV 390
           F  + + G G FG V  G   S G+ VAIK++  + +   +E   +IM  +  L H N+V
Sbjct: 25  FQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNREL--QIMQDLAVLHHPNIV 82
Query: 391 QLHGWC-------RKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQ 443
           QL  +        R+   L +V +YVP+                     + +  L  + +
Sbjct: 83  QLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVF--LFQLIR 140
Query: 444 SLLYLHEECNQRVVHRDVKPSNILLDTYLNA-KLGDFGLAKIYEHGANPQTTHIVGTLGY 502
           S+  LH   +  V HRD+KP N+L++      KL DFG AK     + P   +I     Y
Sbjct: 141 SIGCLHLP-SVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLS-PSEPNVAYICSRY-Y 197
Query: 503 LAPELTRTGKA-TTSTDVYSYGILMLEVACGRRSIEPQKAAAEL 545
            APEL    +  TT+ D++S G +  E+  G        +A +L
Sbjct: 198 RAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQL 241

>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Inhibitor Length = 326

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 60/215 (27%), Positives = 92/215 (42%), Gaps = 29/215 (13%)
Query: 335 QNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQG-MKEFVAEIMSMGRLRHRNLVQLH 393
           Q  +G G FG V+RG     G EVA+K      ++   +E  AEI     LRH N++   
Sbjct: 34  QESIGKGRFGEVWRGKWR--GEEVAVKIFSSREERSWFRE--AEIYQTVMLRHENILGFI 89
Query: 394 GWCRKQD----ELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLH 449
               K +    +L LV DY  +GS                T +   K+ +  A  L +LH
Sbjct: 90  AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTV------TVEGMIKLALSTASGLAHLH 143
Query: 450 EEC-----NQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANP---QTTHIVGTLG 501
            E         + HRD+K  NIL+       + D GLA  ++   +       H VGT  
Sbjct: 144 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKR 203
Query: 502 YLAPEL------TRTGKATTSTDVYSYGILMLEVA 530
           Y+APE+       +  ++    D+Y+ G++  E+A
Sbjct: 204 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 238

>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3- Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine Length = 306

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 60/215 (27%), Positives = 92/215 (42%), Gaps = 29/215 (13%)
Query: 335 QNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQG-MKEFVAEIMSMGRLRHRNLVQLH 393
           Q  +G G FG V+RG     G EVA+K      ++   +E  AEI     LRH N++   
Sbjct: 11  QESIGKGRFGEVWRGKWR--GEEVAVKIFSSREERSWFRE--AEIYQTVMLRHENILGFI 66
Query: 394 GWCRKQD----ELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLH 449
               K +    +L LV DY  +GS                T +   K+ +  A  L +LH
Sbjct: 67  AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTV------TVEGMIKLALSTASGLAHLH 120
Query: 450 EEC-----NQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANP---QTTHIVGTLG 501
            E         + HRD+K  NIL+       + D GLA  ++   +       H VGT  
Sbjct: 121 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKR 180
Query: 502 YLAPEL------TRTGKATTSTDVYSYGILMLEVA 530
           Y+APE+       +  ++    D+Y+ G++  E+A
Sbjct: 181 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 215

>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 In Presence Of Indirubin E804 Length = 277

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 53/203 (26%), Positives = 87/203 (42%), Gaps = 18/203 (8%)
Query: 335 QNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHG 394
           +N +G G +G V   +     +  A K+I     + +  F  EI  M  L H N+++L+ 
Sbjct: 14  ENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYE 73
Query: 395 WCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQ 454
                 ++ LV +    G                       +I+  +  ++ Y H+    
Sbjct: 74  TFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAA-----RIMKDVLSAVAYCHK---L 125
Query: 455 RVVHRDVKPSNILL-----DTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTR 509
            V HRD+KP N L      D+ L  KL DFGLA  ++ G   +T   VGT  Y++P++  
Sbjct: 126 NVAHRDLKPENFLFLTDSPDSPL--KLIDFGLAARFKPGKMMRTK--VGTPYYVSPQVLE 181
Query: 510 TGKATTSTDVYSYGILMLEVACG 532
            G      D +S G++M  + CG
Sbjct: 182 -GLYGPECDEWSAGVMMYVLLCG 203

>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains Trapped In Trans-Phosphorylation Reaction Length = 334

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 50/213 (23%), Positives = 95/213 (44%), Gaps = 24/213 (11%)
Query: 338 VGSGGFGRVYRGLM-------PSLGLEVAIKRIGHN-SQQGMKEFVAEIMSMGRL-RHRN 388
           +G G FG+V            P   + VA+K +  + +++ + + V+E+  M  + +H+N
Sbjct: 43  LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXX-----------XXXXXXXTWDQRYKI 437
           ++ L G C +   L ++ +Y   G+                           T+      
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 438 LIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IYEHGANPQTTHI 496
              +A+ + YL    +Q+ +HRD+   N+L+      K+ DFGLA+ I       +TT+ 
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 497 VGTLGYLAPELTRTGKATTSTDVYSYGILMLEV 529
              + ++APE       T  +DV+S+G+LM E+
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252

>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542 Length = 309

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 60/215 (27%), Positives = 92/215 (42%), Gaps = 29/215 (13%)
Query: 335 QNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQG-MKEFVAEIMSMGRLRHRNLVQLH 393
           Q  +G G FG V+RG     G EVA+K      ++   +E  AEI     LRH N++   
Sbjct: 14  QESIGKGRFGEVWRGKWR--GEEVAVKIFSSREERSWFRE--AEIYQTVMLRHENILGFI 69
Query: 394 GWCRKQD----ELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLH 449
               K +    +L LV DY  +GS                T +   K+ +  A  L +LH
Sbjct: 70  AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTV------TVEGMIKLALSTASGLAHLH 123
Query: 450 EEC-----NQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANP---QTTHIVGTLG 501
            E         + HRD+K  NIL+       + D GLA  ++   +       H VGT  
Sbjct: 124 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKR 183
Query: 502 YLAPEL------TRTGKATTSTDVYSYGILMLEVA 530
           Y+APE+       +  ++    D+Y+ G++  E+A
Sbjct: 184 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 218

>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 Length = 294

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 54/218 (24%), Positives = 93/218 (42%), Gaps = 18/218 (8%)
Query: 320 FKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIM 379
           F+ +    + + +  +N +G G +G V   +     +  A K+I     + +  F  EI 
Sbjct: 16  FQGSTKGDINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIE 75
Query: 380 SMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILI 439
            M  L H N+++L+       ++ LV +    G                       +I+ 
Sbjct: 76  IMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAA-----RIMK 130
Query: 440 GIAQSLLYLHEECNQRVVHRDVKPSNILL-----DTYLNAKLGDFGLAKIYEHGANPQTT 494
            +  ++ Y H+     V HRD+KP N L      D+ L  KL DFGLA  ++ G   +T 
Sbjct: 131 DVLSAVAYCHK---LNVAHRDLKPENFLFLTDSPDSPL--KLIDFGLAARFKPGKMMRTK 185
Query: 495 HIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACG 532
             VGT  Y++P++   G      D +S G++M  + CG
Sbjct: 186 --VGTPYYVSPQVLE-GLYGPECDEWSAGVMMYVLLCG 220

>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 91/207 (43%), Gaps = 19/207 (9%)
Query: 335 QNL--VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGM--KEFVAEIMSMGRLRHRN-- 388
           QNL  VGSG +G V        GL VA+K++    Q  +  K    E+  +  ++H N  
Sbjct: 25  QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 84
Query: 389 -LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
            L+ +    R  +E   VY      +                T D    ++  I + L Y
Sbjct: 85  GLLDVFTPARSLEEFNDVYLV----THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
           +H   +  ++HRD+KPSN+ ++     K+ D+GLA+      + + T  V T  Y APE+
Sbjct: 141 IH---SADIIHRDLKPSNLAVNEDCELKILDYGLAR----HTDDEMTGYVATRWYRAPEI 193
Query: 508 TRTGKATTST-DVYSYGILMLEVACGR 533
                    T D++S G +M E+  GR
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182 Length = 353

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 58/238 (24%), Positives = 104/238 (43%), Gaps = 27/238 (11%)
Query: 327 SVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMK-EFVAEIMSMGRLR 385
           +++  F  ++L+G G +G V        G  VAIK+I    +       + EI  +   +
Sbjct: 8   NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFK 67
Query: 386 HRNLVQLHGWCRKQ-----DELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIG 440
           H N++ +    R       +E+ ++ + +                    + D     +  
Sbjct: 68  HENIITIFNIQRPDSFENFNEVYIIQELM-------QTDLHRVISTQMLSDDHIQYFIYQ 120
Query: 441 IAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQT------- 493
             +++  LH      V+HRD+KPSN+L+++  + K+ DFGLA+I +  A   +       
Sbjct: 121 TLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQS 177
Query: 494 --THIVGTLGYLAPELTRT-GKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLV 548
             T  V T  Y APE+  T  K + + DV+S G ++ E+   RR I P +     LL+
Sbjct: 178 GMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPIFPGRDYRHQLLL 234

>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2 Length = 361

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 93/203 (45%), Gaps = 22/203 (10%)
Query: 333 GEQNLVGSGGFGRVYRGLMPSLGLEVAIK----RIGHNSQQGM--KEFVAEIMSMGRLRH 386
           GE+  +GSG F  V +    S GLE A K    R    S++G+  +E   E+  + ++ H
Sbjct: 17  GEE--LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLH 74
Query: 387 RNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLL 446
            N++ LH     + +++L+ + V  G                 T       +  I   + 
Sbjct: 75  PNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT-----SFIKQILDGVN 129
Query: 447 YLHEECNQRVVHRDVKPSNI-LLDTYL---NAKLGDFGLAKIYEHGANPQTTHIVGTLGY 502
           YLH    +++ H D+KP NI LLD  +   + KL DFGLA   E G   +  +I GT  +
Sbjct: 130 YLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV--EFKNIFGTPEF 184
Query: 503 LAPELTRTGKATTSTDVYSYGIL 525
           +APE+          D++S G++
Sbjct: 185 VAPEIVNYEPLGLEADMWSIGVI 207

>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3 Length = 353

Iteration: 1
 Score = 59.7 bits (143), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 58/238 (24%), Positives = 104/238 (43%), Gaps = 27/238 (11%)
Query: 327 SVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMK-EFVAEIMSMGRLR 385
           +++  F  ++L+G G +G V        G  VAIK+I    +       + EI  +   +
Sbjct: 8   NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFK 67
Query: 386 HRNLVQLHGWCRKQ-----DELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIG 440
           H N++ +    R       +E+ ++ + +                    + D     +  
Sbjct: 68  HENIITIFNIQRPDSFENFNEVYIIQELM-------QTDLHRVISTQMLSDDHIQYFIYQ 120
Query: 441 IAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQT------- 493
             +++  LH      V+HRD+KPSN+L+++  + K+ DFGLA+I +  A   +       
Sbjct: 121 TLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQS 177
Query: 494 --THIVGTLGYLAPELTRT-GKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLV 548
             T  V T  Y APE+  T  K + + DV+S G ++ E+   RR I P +     LL+
Sbjct: 178 GMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPIFPGRDYRHQLLL 234

>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Length = 314

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 56/229 (24%), Positives = 99/229 (43%), Gaps = 34/229 (14%)
Query: 332 FGEQNLV-----GSGGFGRVYRGLMPSLG-----LEVAIKRIGHN-SQQGMKEFVAEIMS 380
           F  +NLV     G G FG+V +     L        VA+K +  N S   +++ ++E   
Sbjct: 20  FPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNV 79
Query: 381 MGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXX---------------- 424
           + ++ H ++++L+G C +   LLL+ +Y   GS                           
Sbjct: 80  LKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSL 139
Query: 425 ---XXXXXTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGL 481
                   T          I+Q + YL E    ++VHRD+   NIL+      K+ DFGL
Sbjct: 140 DHPDERALTMGDLISFAWQISQGMQYLAE---MKLVHRDLAARNILVAEGRKMKISDFGL 196
Query: 482 AK-IYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEV 529
           ++ +YE  +  + +     + ++A E       TT +DV+S+G+L+ E+
Sbjct: 197 SRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEI 245

>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain Length = 311

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 56/204 (27%), Positives = 89/204 (43%), Gaps = 24/204 (11%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVA--EIMSMGRLRHRNLVQLHGW 395
           +G G +G V++      G  VAIK+   +    + + +A  EI  + +L+H NLV L   
Sbjct: 11  IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 396 CRKQDELLLVYDYVPNG---SXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEEC 452
            R++  L LV++Y  +                     TW           Q++ + H+  
Sbjct: 71  FRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQ--------TLQAVNFCHK-- 120
Query: 453 NQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL----T 508
               +HRDVKP NIL+  +   KL DFG A++   G +      V T  Y +PEL    T
Sbjct: 121 -HNCIHRDVKPENILITKHSVIKLCDFGFARLLT-GPSDYYDDEVATRWYRSPELLVGDT 178
Query: 509 RTGKATTSTDVYSYGILMLEVACG 532
           + G      DV++ G +  E+  G
Sbjct: 179 QYG---PPVDVWAIGCVFAELLSG 199

>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632 Length = 350

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 84/198 (42%), Gaps = 15/198 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRN---LVQLHG 394
           +G+G FGRV        G   A+K +       +K+    +     L+  N   LV+L  
Sbjct: 49  IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 395 WCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQ 454
             +    L +V +YVP G                  +         I  +  YLH   + 
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLH---SL 160
Query: 455 RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKAT 514
            +++RD+KP N+L+D     K+ DFG AK        +T  + GT  YLAPE+  +    
Sbjct: 161 DLIYRDLKPENLLIDQQGYIKVADFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 515 TSTDVYSYGILMLEVACG 532
            + D ++ G+L+ E+A G
Sbjct: 217 KAVDWWALGVLIYEMAAG 234

>pdb|2BQP|A Chain A, The Structure Of The Pea Lectin-D-Glucopyranose Complex Length = 234

Iteration: 1
 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 65/244 (26%), Positives = 100/244 (40%), Gaps = 21/244 (8%)
Query: 7   DTTSFLYNGFL--HANLSLEGAAYISTSGILTVTNKSEGLIGHALYPNPLRFKTSNKSVA 64
           +TTSFL   F     NL  +G  Y +T   LT+T   +  +G ALY +P+          
Sbjct: 2   ETTSFLITKFSPDQQNLIFQGDGY-TTKEKLTLTKAVKNTVGRALYSSPIHIWDRETGNV 60
Query: 65  IDFRTNFVFSILPKYPDLGGQGLAFIIISTN-RPENCLANQFLGLPNITMSSSTKFSTRM 123
            +F T+F F I          G  F I   + +P+      +LG+ N   S+    +T+ 
Sbjct: 61  ANFVTSFTFVINAPNSYNVADGFTFFIAPVDTKPQ--TGGGYLGVFN---SAEYDKTTQT 115
Query: 124 LAVEFDIIQNTELIDIN-DNHVGIDXXXXXXXXXXXXXYYSGNNHRIPILLRSG-DPIQA 181
           +AVEFD   N      N D H+GID               +G    + I   +  + +  
Sbjct: 116 VAVEFDTFYNAAWDPSNRDRHIGIDVNSIKSVNTKSWKLQNGEEANVVIAFNAATNVLTV 175
Query: 182 WVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLITASHNVH 241
            + Y +  +   V+   L          S  + L  V+ E++  GFSA+TG   A+H V 
Sbjct: 176 SLTYPNNSLEEEVTSYTL----------SDVVSLKDVVPEWVRIGFSATTGAEYAAHEVL 225
Query: 242 GWSI 245
            WS 
Sbjct: 226 SWSF 229

>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306

Iteration: 1
 Score = 59.3 bits (142), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 50/204 (24%), Positives = 92/204 (45%), Gaps = 15/204 (7%)
Query: 338 VGSGGFGRVYRG-----LMPSLGLEVAIKRIGHNSQQGMK-EFVAEIMSMGRLRHRNLVQ 391
           +G G FG VY G     +       VA+K +  ++    + EF+ E   M      ++V+
Sbjct: 25  LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 392 LHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXX-----TWDQRYKILIGIAQSLL 446
           L G   K    L+V + + +G                      T  +  ++   IA  + 
Sbjct: 85  LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 447 YLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IYEHGANPQTTHIVGTLGYLAP 505
           YL+    ++ VHRD+   N ++      K+GDFG+ + IYE     +    +  + ++AP
Sbjct: 145 YLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWMAP 201
Query: 506 ELTRTGKATTSTDVYSYGILMLEV 529
           E  + G  TTS+D++S+G+++ E+
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEI 225

>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase Domain Of Csf-1r Length = 324

Iteration: 1
 Score = 59.3 bits (142), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 61/222 (27%), Positives = 96/222 (43%), Gaps = 37/222 (16%)
Query: 338 VGSGGFGRVYRGLMPSLG-----LEVAIKRIGHNSQQGMKE-FVAEIMSMGRL-RHRNLV 390
           +G+G FG+V       LG     L+VA+K +   +    KE  ++E+  M  L +H N+V
Sbjct: 39  LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 98
Query: 391 QLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXX-----------XXXXTWDQRYKILI 439
            L G C     +L++ +Y   G                              D R   L 
Sbjct: 99  NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELR 158
Query: 440 G-------IAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQ 492
                   +AQ + +L    ++  +HRDV   N+LL     AK+GDFGLA+   + +N  
Sbjct: 159 DLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN-- 213
Query: 493 TTHIVG-----TLGYLAPELTRTGKATTSTDVYSYGILMLEV 529
             +IV       + ++APE       T  +DV+SYGIL+ E+
Sbjct: 214 --YIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI 253

>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By Mutational Studies Length = 298

Iteration: 1
 Score = 59.3 bits (142), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 60/224 (26%), Positives = 95/224 (42%), Gaps = 30/224 (13%)
Query: 329 TKGFGE----QNLVGSGGFGRVYRGLMPSLGLEVAIKRI-----GHNSQQGMKEF-VAEI 378
           T GF E    + ++G G    V R +      E A+K I     G  S + ++E   A +
Sbjct: 12  THGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATL 71
Query: 379 MSMGRLR----HRNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQR 434
             +  LR    H N++QL           LV+D +  G                 +  + 
Sbjct: 72  KEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTL-----SEKET 126
Query: 435 YKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTT 494
            KI+  + + +  LH+     +VHRD+KP NILLD  +N KL DFG +   + G   ++ 
Sbjct: 127 RKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRS- 182
Query: 495 HIVGTLGYLAPELTRTGKATT------STDVYSYGILMLEVACG 532
            + GT  YLAPE+                D++S G++M  +  G
Sbjct: 183 -VCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225

>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7 Length = 353

Iteration: 1
 Score = 59.3 bits (142), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 59/238 (24%), Positives = 105/238 (44%), Gaps = 27/238 (11%)
Query: 327 SVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMK-EFVAEIMSMGRLR 385
           +++  F  ++L+G G +G V        G  VAIK+I    +       + EI  +   +
Sbjct: 8   NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFK 67
Query: 386 HRNLVQLHGWCRKQ-----DELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIG 440
           H N++ +    R       +E+ ++ + +                    + D     +  
Sbjct: 68  HENIITIFNIQRPDSFENFNEVYIIQELM-------QTDLHRVISTQMLSDDHIQYFIYQ 120
Query: 441 IAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGA--NPQTT---- 494
             +++  LH      V+HRD+KPSN+L+++  + K+ DFGLA+I +  A  N + T    
Sbjct: 121 TLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQS 177
Query: 495 ---HIVGTLGYLAPELTRT-GKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLV 548
                V T  Y APE+  T  K + + DV+S G ++ E+   RR I P +     LL+
Sbjct: 178 GMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPIFPGRDYRHQLLL 234

>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine Kinase Domain Length = 314

Iteration: 1
 Score = 59.3 bits (142), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 56/229 (24%), Positives = 99/229 (43%), Gaps = 34/229 (14%)
Query: 332 FGEQNLV-----GSGGFGRVYRGLMPSLG-----LEVAIKRIGHN-SQQGMKEFVAEIMS 380
           F  +NLV     G G FG+V +     L        VA+K +  N S   +++ ++E   
Sbjct: 20  FPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNV 79
Query: 381 MGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXX---------------- 424
           + ++ H ++++L+G C +   LLL+ +Y   GS                           
Sbjct: 80  LKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSL 139
Query: 425 ---XXXXXTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGL 481
                   T          I+Q + YL E    ++VHRD+   NIL+      K+ DFGL
Sbjct: 140 DHPDERALTMGDLISFAWQISQGMQYLAE---MKLVHRDLAARNILVAEGRKMKISDFGL 196
Query: 482 AK-IYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEV 529
           ++ +YE  +  + +     + ++A E       TT +DV+S+G+L+ E+
Sbjct: 197 SRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEI 245

>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based Inhibitor Length = 383

Iteration: 1
 Score = 59.3 bits (142), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 90/207 (43%), Gaps = 19/207 (9%)
Query: 335 QNL--VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGM--KEFVAEIMSMGRLRHRN-- 388
           QNL  VGSG +G V        GL VA+K++    Q  +  K    E+  +  ++H N  
Sbjct: 48  QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 107
Query: 389 -LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
            L+ +    R  +E   VY      +                T D    ++  I + L Y
Sbjct: 108 GLLDVFTPARSLEEFNDVYLV----THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 163
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
           +H   +  ++HRD+KPSN+ ++     K+ DFGLA+      + +    V T  Y APE+
Sbjct: 164 IH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMXGYVATRWYRAPEI 216
Query: 508 TRTGKATTST-DVYSYGILMLEVACGR 533
                    T D++S G +M E+  GR
Sbjct: 217 MLNWMHYNQTVDIWSVGCIMAELLTGR 243

>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K526e Mutation Responsible For Crouzon Syndrome Length = 324

Iteration: 1
 Score = 59.3 bits (142), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 50/213 (23%), Positives = 95/213 (44%), Gaps = 24/213 (11%)
Query: 338 VGSGGFGRVYRGLM-------PSLGLEVAIKRIGHN-SQQGMKEFVAEIMSMGRL-RHRN 388
           +G G FG+V            P   + VA+K +  + +++ + + V+E+  M  + +H+N
Sbjct: 43  LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXX-----------XXXXXXXTWDQRYKI 437
           ++ L G C +   L ++ +Y   G+                           T+      
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 438 LIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IYEHGANPQTTHI 496
              +A+ + YL    +Q+ +HRD+   N+L+      K+ DFGLA+ I       +TT+ 
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 497 VGTLGYLAPELTRTGKATTSTDVYSYGILMLEV 529
              + ++APE       T  +DV+S+G+LM E+
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252

>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From Toxoplasma Gondii, 541.m00134, Kinase Domain Length = 287

Iteration: 1
 Score = 59.3 bits (142), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 88/201 (43%), Gaps = 17/201 (8%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNS---QQGMKEFVAEIMSMGRLRHRNLVQLHG 394
           +GSG +G V        G E AIK I  +S          + E+  + +L H N+++L+ 
Sbjct: 29  LGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYE 88
Query: 395 WCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQ 454
           +   +    LV +    G                        I+  +     YLH+    
Sbjct: 89  FFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAV-----IMKQVLSGTTYLHK---H 140
Query: 455 RVVHRDVKPSNILLDTYLN---AKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTG 511
            +VHRD+KP N+LL++       K+ DFGL+  +E G   +    +GT  Y+APE+ R  
Sbjct: 141 NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKER--LGTAYYIAPEVLRK- 197
Query: 512 KATTSTDVYSYGILMLEVACG 532
           K     DV+S G+++  + CG
Sbjct: 198 KYDEKCDVWSCGVILYILLCG 218

>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580 Length = 360

Iteration: 1
 Score = 59.3 bits (142), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 90/207 (43%), Gaps = 19/207 (9%)
Query: 335 QNL--VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGM--KEFVAEIMSMGRLRHRN-- 388
           QNL  VGSG +G V        GL VA+K++    Q  +  K    E+  +  ++H N  
Sbjct: 25  QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 84
Query: 389 -LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
            L+ +    R  +E   VY      +                T D    ++  I + L Y
Sbjct: 85  GLLDVFTPARSLEEFNDVYLV----THLMGADLNNIVKSQKLTDDHVQFLIYQILRGLKY 140
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
           +H   +  ++HRD+KPSN+ ++     K+ DFGL +      + + T  V T  Y APE+
Sbjct: 141 IH---SADIIHRDLKPSNLAVNEDSELKILDFGLCR----HTDDEMTGYVATRWYRAPEI 193
Query: 508 TRTGKATTST-DVYSYGILMLEVACGR 533
                    T D++S G +M E+  GR
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase, Kinase: An Active Protein Kinase Complexed With Nucleotide, Substrate-Analogue And Product Length = 298

Iteration: 1
 Score = 59.3 bits (142), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 60/224 (26%), Positives = 94/224 (41%), Gaps = 30/224 (13%)
Query: 329 TKGFGE----QNLVGSGGFGRVYRGLMPSLGLEVAIKRI-----GHNSQQGMKEF-VAEI 378
           T GF E    + ++G G    V R +      E A+K I     G  S + ++E   A +
Sbjct: 12  THGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATL 71
Query: 379 MSMGRLR----HRNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQR 434
             +  LR    H N++QL           LV+D +  G                 +  + 
Sbjct: 72  KEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTL-----SEKET 126
Query: 435 YKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTT 494
            KI+  + + +  LH+     +VHRD+KP NILLD  +N KL DFG +   + G   +  
Sbjct: 127 RKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE--KLR 181
Query: 495 HIVGTLGYLAPELTRTGKATT------STDVYSYGILMLEVACG 532
            + GT  YLAPE+                D++S G++M  +  G
Sbjct: 182 EVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225

>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549h Mutation Responsible For Crouzon Syndrome. Length = 324

Iteration: 1
 Score = 59.3 bits (142), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 50/213 (23%), Positives = 95/213 (44%), Gaps = 24/213 (11%)
Query: 338 VGSGGFGRVYRGLM-------PSLGLEVAIKRIGHN-SQQGMKEFVAEIMSMGRL-RHRN 388
           +G G FG+V            P   + VA+K +  + +++ + + V+E+  M  + +H+N
Sbjct: 43  LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXX-----------XXXXXXXTWDQRYKI 437
           ++ L G C +   L ++ +Y   G+                           T+      
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 438 LIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IYEHGANPQTTHI 496
              +A+ + YL    +Q+ +HRD+   N+L+      K+ DFGLA+ I       +TT+ 
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 497 VGTLGYLAPELTRTGKATTSTDVYSYGILMLEV 529
              + ++APE       T  +DV+S+G+LM E+
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252

>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P- Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl- Pyridin-3-Yl)naphthalen-1-Yl]urea Length = 348

Iteration: 1
 Score = 59.3 bits (142), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 62/224 (27%), Positives = 95/224 (42%), Gaps = 21/224 (9%)
Query: 320 FKYAELASVTKGFGE--QNL--VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGM--KE 373
           F   ELA       E  QNL  VGSG +G V        G  VA+K++    Q  +  K 
Sbjct: 4   FYRQELAKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR 63
Query: 374 FVAEIMSMGRLRHRN---LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXT 430
              E+  +  ++H N   L+ +    R  +E   VY      +                T
Sbjct: 64  TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV----THLMGADLNNIVKCAKLT 119
Query: 431 WDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGAN 490
            D    ++  I + L Y+H   +  ++HRD+KPSN+ ++     K+ DFGLA+      +
Sbjct: 120 DDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTD 172
Query: 491 PQTTHIVGTLGYLAPELTRTGKATTST-DVYSYGILMLEVACGR 533
            + T  V T  Y APE+         T D++S G +M E+  GR
Sbjct: 173 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216

>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486

Iteration: 1
 Score = 58.9 bits (141), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 85/195 (43%), Gaps = 16/195 (8%)
Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS--QQGMKEFVAEIMSMGRLRHRNLVQLHG 394
           ++G G FG V +        E A+K I   S   +     + E+  + +L H N+++L  
Sbjct: 29  MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 395 WCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQ 454
                    +V +    G                       +I+  +   + Y+H+    
Sbjct: 89  ILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAA-----RIIKQVFSGITYMHK---H 140
Query: 455 RVVHRDVKPSNILLDTY---LNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTG 511
            +VHRD+KP NILL++     + K+ DFGL+  ++   N +    +GT  Y+APE+ R G
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ--NTKMKDRIGTAYYIAPEVLR-G 197
Query: 512 KATTSTDVYSYGILM 526
                 DV+S G+++
Sbjct: 198 TYDEKCDVWSAGVIL 212

>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860 Length = 467

Iteration: 1
 Score = 58.9 bits (141), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 88/201 (43%), Gaps = 17/201 (8%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNS---QQGMKEFVAEIMSMGRLRHRNLVQLHG 394
           +GSG +G V        G E AIK I  +S          + E+  + +L H N+++L+ 
Sbjct: 12  LGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYE 71
Query: 395 WCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQ 454
           +   +    LV +    G                        I+  +     YLH+    
Sbjct: 72  FFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAV-----IMKQVLSGTTYLHK---H 123
Query: 455 RVVHRDVKPSNILLDTYLNA---KLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTG 511
            +VHRD+KP N+LL++       K+ DFGL+  +E G   +    +GT  Y+APE+ R  
Sbjct: 124 NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKER--LGTAYYIAPEVLRK- 180
Query: 512 KATTSTDVYSYGILMLEVACG 532
           K     DV+S G+++  + CG
Sbjct: 181 KYDEKCDVWSCGVILYILLCG 201

>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 367

Iteration: 1
 Score = 58.9 bits (141), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 55/221 (24%), Positives = 96/221 (43%), Gaps = 15/221 (6%)
Query: 338 VGSGGFGRVYRGLMPSLG-----LEVAIKRIGH-NSQQGMKEFVAEIMSMGRLRHRNLVQ 391
           +G G FG VY G +  +      L+VA+K +    S+Q   +F+ E + + +  H+N+V+
Sbjct: 79  LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 392 LHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIG--IAQSLLYLH 449
             G   +     ++ + +  G                 +      + +   IA    YL 
Sbjct: 139 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 198
Query: 450 EECNQRVVHRDVKPSNILLDTY---LNAKLGDFGLAK-IYEHGANPQTTHIVGTLGYLAP 505
           E      +HRD+   N LL        AK+GDFG+A+ IY  G   +    +  + ++ P
Sbjct: 199 E---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPP 255
Query: 506 ELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELL 546
           E    G  T+ TD +S+G+L+ E+        P K+  E+L
Sbjct: 256 EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL 296

>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Human Insulin Receptor Length = 306

Iteration: 1
 Score = 58.9 bits (141), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 50/205 (24%), Positives = 92/205 (44%), Gaps = 15/205 (7%)
Query: 338 VGSGGFGRVYRG-----LMPSLGLEVAIKRIGHNSQQGMK-EFVAEIMSMGRLRHRNLVQ 391
           +G G FG VY G     +       VA+K +  ++    + EF+ E   M      ++V+
Sbjct: 25  LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 392 LHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXX-----TWDQRYKILIGIAQSLL 446
           L G   K    L+V + + +G                      T  +  ++   IA  + 
Sbjct: 85  LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 447 YLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IYEHGANPQTTHIVGTLGYLAP 505
           YL+    ++ VHRD+   N ++      K+GDFG+ + IYE     +    +  + ++AP
Sbjct: 145 YLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 201
Query: 506 ELTRTGKATTSTDVYSYGILMLEVA 530
           E  + G  TTS+D++S+G+++ E+ 
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEIT 226

>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287

Iteration: 1
 Score = 58.9 bits (141), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 85/195 (43%), Gaps = 16/195 (8%)
Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS--QQGMKEFVAEIMSMGRLRHRNLVQLHG 394
           ++G G FG V +        E A+K I   S   +     + E+  + +L H N+++L  
Sbjct: 29  MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 395 WCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQ 454
                    +V +    G                       +I+  +   + Y+H+    
Sbjct: 89  ILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAA-----RIIKQVFSGITYMHK---H 140
Query: 455 RVVHRDVKPSNILLDTY---LNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTG 511
            +VHRD+KP NILL++     + K+ DFGL+  ++   N +    +GT  Y+APE+ R G
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ--NTKMKDRIGTAYYIAPEVLR-G 197
Query: 512 KATTSTDVYSYGILM 526
                 DV+S G+++
Sbjct: 198 TYDEKCDVWSAGVIL 212

>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine Kinase Length = 277

Iteration: 1
 Score = 58.9 bits (141), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 51/204 (25%), Positives = 92/204 (45%), Gaps = 26/204 (12%)
Query: 337 LVGSGGFGRVYRGLMPS---LGLEVAIKRIGHNSQQGMKE-FVAEIMSMGRLRHRNLVQL 392
           ++G G FG VY G+  +     + VA+K    +     KE F++E + M  L H ++V+L
Sbjct: 15  ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 74
Query: 393 HGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEEC 452
            G   ++   +++  Y P G                    +R K  + +   +LY  + C
Sbjct: 75  IGIIEEEPTWIIMELY-PYGELGHYL--------------ERNKNSLKVLTLVLYSLQIC 119
Query: 453 NQ-------RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAP 505
                      VHRD+   NIL+ +    KLGDFGL++  E     + +     + +++P
Sbjct: 120 KAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSP 179
Query: 506 ELTRTGKATTSTDVYSYGILMLEV 529
           E     + TT++DV+ + + M E+
Sbjct: 180 ESINFRRFTTASDVWMFAVCMWEI 203

>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 344

Iteration: 1
 Score = 58.9 bits (141), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 55/221 (24%), Positives = 96/221 (43%), Gaps = 15/221 (6%)
Query: 338 VGSGGFGRVYRGLMPSLG-----LEVAIKRIGH-NSQQGMKEFVAEIMSMGRLRHRNLVQ 391
           +G G FG VY G +  +      L+VA+K +    S+Q   +F+ E + + +  H+N+V+
Sbjct: 56  LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 392 LHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIG--IAQSLLYLH 449
             G   +     ++ + +  G                 +      + +   IA    YL 
Sbjct: 116 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 175
Query: 450 EECNQRVVHRDVKPSNILLDTY---LNAKLGDFGLAK-IYEHGANPQTTHIVGTLGYLAP 505
           E      +HRD+   N LL        AK+GDFG+A+ IY  G   +    +  + ++ P
Sbjct: 176 E---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPP 232
Query: 506 ELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELL 546
           E    G  T+ TD +S+G+L+ E+        P K+  E+L
Sbjct: 233 EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL 273

>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286

Iteration: 1
 Score = 58.9 bits (141), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 85/195 (43%), Gaps = 16/195 (8%)
Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS--QQGMKEFVAEIMSMGRLRHRNLVQLHG 394
           ++G G FG V +        E A+K I   S   +     + E+  + +L H N+++L  
Sbjct: 29  MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 395 WCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQ 454
                    +V +    G                       +I+  +   + Y+H+    
Sbjct: 89  ILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAA-----RIIKQVFSGITYMHK---H 140
Query: 455 RVVHRDVKPSNILLDTY---LNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTG 511
            +VHRD+KP NILL++     + K+ DFGL+  ++   N +    +GT  Y+APE+ R G
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ--NTKMKDRIGTAYYIAPEVLR-G 197
Query: 512 KATTSTDVYSYGILM 526
                 DV+S G+++
Sbjct: 198 TYDEKCDVWSAGVIL 212

>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With Inhibitor Pg-892579 Length = 348

Iteration: 1
 Score = 58.9 bits (141), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 90/207 (43%), Gaps = 19/207 (9%)
Query: 335 QNL--VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGM--KEFVAEIMSMGRLRHRN-- 388
           QNL  VGSG +G V        G  VA+K++    Q  +  K    E+  +  ++H N  
Sbjct: 21  QNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 80
Query: 389 -LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
            L+ +    R  +E   VY      +                T D    ++  I + L Y
Sbjct: 81  GLLDVFTPARSLEEFNDVYLV----THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 136
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
           +H   +  ++HRD+KPSN+ ++     K+ DFGLA+      + + T  V T  Y APE+
Sbjct: 137 IH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEI 189
Query: 508 TRTGKATTST-DVYSYGILMLEVACGR 533
                    T D++S G +M E+  GR
Sbjct: 190 MLNWMHYNQTVDIWSVGCIMAELLTGR 216

>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine Kinase 2 Beta (ptk2b) Length = 281

Iteration: 1
 Score = 58.9 bits (141), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 50/204 (24%), Positives = 92/204 (45%), Gaps = 26/204 (12%)
Query: 337 LVGSGGFGRVYRGLMPS---LGLEVAIKRIGHNSQQGMKE-FVAEIMSMGRLRHRNLVQL 392
           ++G G FG VY G+  +     + VA+K    +     KE F++E + M  L H ++V+L
Sbjct: 19  ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 78
Query: 393 HGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEEC 452
            G   +++   ++ +  P G                    +R K  + +   +LY  + C
Sbjct: 79  IG-IIEEEPTWIIMELYPYGELGHYL--------------ERNKNSLKVLTLVLYSLQIC 123
Query: 453 NQ-------RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAP 505
                      VHRD+   NIL+ +    KLGDFGL++  E     + +     + +++P
Sbjct: 124 KAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSP 183
Query: 506 ELTRTGKATTSTDVYSYGILMLEV 529
           E     + TT++DV+ + + M E+
Sbjct: 184 ESINFRRFTTASDVWMFAVCMWEI 207

>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549t Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 58.9 bits (141), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 50/213 (23%), Positives = 95/213 (44%), Gaps = 24/213 (11%)
Query: 338 VGSGGFGRVYRGLM-------PSLGLEVAIKRIGHN-SQQGMKEFVAEIMSMGRL-RHRN 388
           +G G FG+V            P   + VA+K +  + +++ + + V+E+  M  + +H+N
Sbjct: 43  LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXX-----------XXXXXXXTWDQRYKI 437
           ++ L G C +   L ++ +Y   G+                           T+      
Sbjct: 103 IITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 438 LIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IYEHGANPQTTHI 496
              +A+ + YL    +Q+ +HRD+   N+L+      K+ DFGLA+ I       +TT+ 
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 497 VGTLGYLAPELTRTGKATTSTDVYSYGILMLEV 529
              + ++APE       T  +DV+S+G+LM E+
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252

>pdb|2OZA|B Chain B, Structure Of P38alpha Complex Length = 366

Iteration: 1
 Score = 58.9 bits (141), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 89/207 (42%), Gaps = 19/207 (9%)
Query: 335 QNL--VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQ--GMKEFVAEIMSMGRLRHRN-- 388
           QNL  VGSG +G V        G  VA+K++    Q     K    E+  +  ++H N  
Sbjct: 31  QNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 90
Query: 389 -LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
            L+ +    R  +E   VY      +                T D    ++  I + L Y
Sbjct: 91  GLLDVFTPARSLEEFNDVYLV----THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 146
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
           +H   +  ++HRD+KPSN+ ++     K+ DFGLA+      + + T  V T  Y APE+
Sbjct: 147 IH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEI 199
Query: 508 TRTGKATTST-DVYSYGILMLEVACGR 533
                    T D++S G +M E+  GR
Sbjct: 200 MLNWMHYNQTVDIWSVGCIMAELLTGR 226

>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 327

Iteration: 1
 Score = 58.9 bits (141), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 82/194 (42%), Gaps = 14/194 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLRHRNLVQLHGW 395
           +G G F  V R +    G E A K I     S +  ++   E      L+H N+V+LH  
Sbjct: 12  LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 396 CRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQR 455
             ++    LV+D V  G                 +       +  I +S+ + H      
Sbjct: 72  ISEEGFHYLVFDLVTGGELFEDIVAREYYSEADAS-----HCIQQILESVNHCH---LNG 123
Query: 456 VVHRDVKPSNILLDTYLNA---KLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGK 512
           +VHRD+KP N+LL +       KL DFGLA I   G         GT GYL+PE+ R   
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQQAWFGFAGTPGYLSPEVLRKDP 182
Query: 513 ATTSTDVYSYGILM 526
                D+++ G+++
Sbjct: 183 YGKPVDMWACGVIL 196

>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a Length = 293

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 51/204 (25%), Positives = 92/204 (45%), Gaps = 26/204 (12%)
Query: 337 LVGSGGFGRVYRGLMPS---LGLEVAIKRIGHNSQQGMKE-FVAEIMSMGRLRHRNLVQL 392
           ++G G FG VY G+  +     + VA+K    +     KE F++E + M  L H ++V+L
Sbjct: 31  ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 90
Query: 393 HGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEEC 452
            G   ++   +++  Y P G                    +R K  + +   +LY  + C
Sbjct: 91  IGIIEEEPTWIIMELY-PYGELGHYL--------------ERNKNSLKVLTLVLYSLQIC 135
Query: 453 NQ-------RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAP 505
                      VHRD+   NIL+ +    KLGDFGL++  E     + +     + +++P
Sbjct: 136 KAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSP 195
Query: 506 ELTRTGKATTSTDVYSYGILMLEV 529
           E     + TT++DV+ + + M E+
Sbjct: 196 ESINFRRFTTASDVWMFAVCMWEI 219

>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In Phosphorylated P38a And In Solution Length = 370

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 90/207 (43%), Gaps = 19/207 (9%)
Query: 335 QNL--VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGM--KEFVAEIMSMGRLRHRN-- 388
           QNL  VGSG +G V        G  VA+K++    Q  +  K    E+  +  ++H N  
Sbjct: 35  QNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 94
Query: 389 -LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
            L+ +    R  +E   VY      +                T D    ++  I + L Y
Sbjct: 95  GLLDVFTPARSLEEFNDVYLV----THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 150
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
           +H   +  ++HRD+KPSN+ ++     K+ DFGLA+      + + T  V T  Y APE+
Sbjct: 151 IH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEI 203
Query: 508 TRTGKATTST-DVYSYGILMLEVACGR 533
                    T D++S G +M E+  GR
Sbjct: 204 MLNWMHYNQTVDIWSVGCIMAELLTGR 230

>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking Site On Its Nuclear Substrate Mef2a Length = 360

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 90/207 (43%), Gaps = 19/207 (9%)
Query: 335 QNL--VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGM--KEFVAEIMSMGRLRHRN-- 388
           QNL  VGSG +G V        G  VA+K++    Q  +  K    E+  +  ++H N  
Sbjct: 25  QNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 84
Query: 389 -LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
            L+ +    R  +E   VY      +                T D    ++  I + L Y
Sbjct: 85  GLLDVFTPARSLEEFNDVYLV----THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
           +H   +  ++HRD+KPSN+ ++     K+ DFGLA+      + + T  V T  Y APE+
Sbjct: 141 IH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEI 193
Query: 508 TRTGKATTST-DVYSYGILMLEVACGR 533
                    T D++S G +M E+  GR
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent Protein Kinase Ii Delta Isoform 1, Camkd Length = 301

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 82/194 (42%), Gaps = 14/194 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLRHRNLVQLHGW 395
           +G G F  V R +    G E A K I     S +  ++   E      L+H N+V+LH  
Sbjct: 12  LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 396 CRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQR 455
             ++    LV+D V  G                 +       +  I +S+ + H      
Sbjct: 72  ISEEGFHYLVFDLVTGGELFEDIVAREYYSEADAS-----HCIQQILESVNHCH---LNG 123
Query: 456 VVHRDVKPSNILLDTYLNA---KLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGK 512
           +VHRD+KP N+LL +       KL DFGLA I   G         GT GYL+PE+ R   
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQQAWFGFAGTPGYLSPEVLRKDP 182
Query: 513 ATTSTDVYSYGILM 526
                D+++ G+++
Sbjct: 183 YGKPVDMWACGVIL 196

>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1 Reveals A Novel Autoinhibitory Conformation For A Dual Kinase Protein Length = 355

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 72/147 (48%), Gaps = 12/147 (8%)
Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIG-IAQSLLY 447
           LV LH   + + +L L+ DY+  G                   +   +I +G I  +L +
Sbjct: 121 LVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFT------EHEVQIYVGEIVLALEH 174
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
           LH+     +++RD+K  NILLD+  +  L DFGL+K +      +     GT+ Y+AP++
Sbjct: 175 LHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDI 231
Query: 508 TRTGKA--TTSTDVYSYGILMLEVACG 532
            R G +    + D +S G+LM E+  G
Sbjct: 232 VRGGDSGHDKAVDWWSLGVLMYELLTG 258

>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo Pyridine Inhibitor Length = 317

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/204 (24%), Positives = 92/204 (45%), Gaps = 15/204 (7%)
Query: 338 VGSGGFGRVYRG-----LMPSLGLEVAIKRIGHNSQQGMK-EFVAEIMSMGRLRHRNLVQ 391
           +G G FG VY G     +       VA+K +  ++    + EF+ E   M      ++V+
Sbjct: 24  LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 392 LHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXX-----TWDQRYKILIGIAQSLL 446
           L G   K    L+V + + +G                      T  +  ++   IA  + 
Sbjct: 84  LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 143
Query: 447 YLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IYEHGANPQTTHIVGTLGYLAP 505
           YL+    ++ VHRD+   N ++      K+GDFG+ + IYE     +    +  + ++AP
Sbjct: 144 YLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 200
Query: 506 ELTRTGKATTSTDVYSYGILMLEV 529
           E  + G  TTS+D++S+G+++ E+
Sbjct: 201 ESLKDGVFTTSSDMWSFGVVLWEI 224

>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp Length = 298

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 60/218 (27%), Positives = 100/218 (45%), Gaps = 25/218 (11%)
Query: 336 NLVGSGGFGRVYRGLMPSLG---LEVAIKRIGHNSQ-QGMKEFVAEIMSMGRLRHRNLVQ 391
            ++G G FG VY G         ++ AIK +   ++ Q ++ F+ E + M  L H N++ 
Sbjct: 27  RVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLA 86
Query: 392 LHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIG----IAQSLLY 447
           L G       ++L  + +P+                    +   K LI     +A+ + Y
Sbjct: 87  LIG-------IMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEY 139
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIY---EHGANPQTTHIVGTLGYLA 504
           L E   Q+ VHRD+   N +LD     K+ DFGLA+     E+ +  Q  H    + + A
Sbjct: 140 LAE---QKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTA 196
Query: 505 PELTRTGKATTSTDVYSYGILMLEV----ACGRRSIEP 538
            E  +T + TT +DV+S+G+L+ E+    A   R I+P
Sbjct: 197 LESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDP 234

>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Complexed With The Inhibitor Pp1 Length = 314

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/229 (24%), Positives = 98/229 (42%), Gaps = 34/229 (14%)
Query: 332 FGEQNLV-----GSGGFGRVYRGLMPSLG-----LEVAIKRIGHN-SQQGMKEFVAEIMS 380
           F  +NLV     G G FG+V +     L        VA+K +  N S   +++ ++E   
Sbjct: 20  FPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNV 79
Query: 381 MGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXX---------------- 424
           + ++ H ++++L+G C +   LLL+ +Y   GS                           
Sbjct: 80  LKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSL 139
Query: 425 ---XXXXXTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGL 481
                   T          I+Q + YL E     +VHRD+   NIL+      K+ DFGL
Sbjct: 140 DHPDERALTMGDLISFAWQISQGMQYLAE---MSLVHRDLAARNILVAEGRKMKISDFGL 196
Query: 482 AK-IYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEV 529
           ++ +YE  +  + +     + ++A E       TT +DV+S+G+L+ E+
Sbjct: 197 SRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEI 245

>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound To Ldn- 193189 Length = 305

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 61/233 (26%), Positives = 100/233 (42%), Gaps = 39/233 (16%)
Query: 327 SVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQG-MKEFVAEIMSMGRLR 385
           +V +       VG G +G V+RGL    G  VA+K      +Q   +E   EI +   LR
Sbjct: 5   TVARQVALVECVGKGRYGEVWRGLWH--GESVAVKIFSSRDEQSWFRE--TEIYNTVLLR 60
Query: 386 HRNLVQLHGW----CRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGI 441
           H N++              +L L+  Y  +GS                      ++ +  
Sbjct: 61  HDNILGFIASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLAL------RLAVSA 114
Query: 442 AQSLLYLHEEC-----NQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGA------- 489
           A  L +LH E         + HRD K  N+L+ + L   + D GLA ++  G+       
Sbjct: 115 ACGLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGN 174
Query: 490 NPQTTHIVGTLGYLAPEL------TRTGKATTSTDVYSYGILMLEVACGRRSI 536
           NP+    VGT  Y+APE+      T   ++   TD++++G+++ E+A  RR+I
Sbjct: 175 NPR----VGTKRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEIA--RRTI 221

>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild Type Fgf Receptor 2 (Fgfr2) Kinase Domain Length = 370

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/213 (23%), Positives = 95/213 (44%), Gaps = 24/213 (11%)
Query: 338 VGSGGFGRVYRGLM-------PSLGLEVAIKRIGHN-SQQGMKEFVAEIMSMGRL-RHRN 388
           +G G FG+V            P   + VA+K +  + +++ + + V+E+  M  + +H+N
Sbjct: 89  LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXX-----------XXXXXXXTWDQRYKI 437
           ++ L G C +   L ++ +Y   G+                           T+      
Sbjct: 149 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 208
Query: 438 LIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IYEHGANPQTTHI 496
              +A+ + YL    +Q+ +HRD+   N+L+      K+ DFGLA+ I       +TT+ 
Sbjct: 209 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 265
Query: 497 VGTLGYLAPELTRTGKATTSTDVYSYGILMLEV 529
              + ++APE       T  +DV+S+G+LM E+
Sbjct: 266 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 298

>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk Docking Partner Length = 380

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 90/207 (43%), Gaps = 19/207 (9%)
Query: 335 QNL--VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGM--KEFVAEIMSMGRLRHRN-- 388
           QNL  VGSG +G V        G  VA+K++    Q  +  K    E+  +  ++H N  
Sbjct: 45  QNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 104
Query: 389 -LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
            L+ +    R  +E   VY      +                T D    ++  I + L Y
Sbjct: 105 GLLDVFTPARSLEEFNDVYLV----THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 160
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
           +H   +  ++HRD+KPSN+ ++     K+ DFGLA+      + + T  V T  Y APE+
Sbjct: 161 IH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEI 213
Query: 508 TRTGKATTST-DVYSYGILMLEVACGR 533
                    T D++S G +M E+  GR
Sbjct: 214 MLNWMHYNQTVDIWSVGCIMAELLTGR 240

>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K659n Mutation Responsible For An Unclassified Craniosynostosis Syndrome. Length = 324

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/213 (23%), Positives = 94/213 (44%), Gaps = 24/213 (11%)
Query: 338 VGSGGFGRVYRGLM-------PSLGLEVAIKRIGHN-SQQGMKEFVAEIMSMGRL-RHRN 388
           +G G FG+V            P   + VA+K +  + +++ + + V+E+  M  + +H+N
Sbjct: 43  LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXX-----------XXXXXXXTWDQRYKI 437
           ++ L G C +   L ++ +Y   G+                           T+      
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 438 LIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IYEHGANPQTTHI 496
              +A+ + YL    +Q+ +HRD+   N+L+      K+ DFGLA+ I        TT+ 
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNG 219
Query: 497 VGTLGYLAPELTRTGKATTSTDVYSYGILMLEV 529
              + ++APE       T  +DV+S+G+LM E+
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252

>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655 Length = 379

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 90/207 (43%), Gaps = 19/207 (9%)
Query: 335 QNL--VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGM--KEFVAEIMSMGRLRHRN-- 388
           QNL  VGSG +G V        G  VA+K++    Q  +  K    E+  +  ++H N  
Sbjct: 44  QNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 103
Query: 389 -LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
            L+ +    R  +E   VY      +                T D    ++  I + L Y
Sbjct: 104 GLLDVFTPARSLEEFNDVYLV----THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 159
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
           +H   +  ++HRD+KPSN+ ++     K+ DFGLA+      + + T  V T  Y APE+
Sbjct: 160 IH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEI 212
Query: 508 TRTGKATTST-DVYSYGILMLEVACGR 533
                    T D++S G +M E+  GR
Sbjct: 213 MLNWMHYNQTVDIWSVGCIMAELLTGR 239

>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain Length = 316

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/213 (23%), Positives = 95/213 (44%), Gaps = 24/213 (11%)
Query: 338 VGSGGFGRVYRGLM-------PSLGLEVAIKRIGHN-SQQGMKEFVAEIMSMGRL-RHRN 388
           +G G FG+V            P   + VA+K +  + +++ + + V+E+  M  + +H+N
Sbjct: 35  LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXX-----------XXXXXXXTWDQRYKI 437
           ++ L G C +   L ++ +Y   G+                           T+      
Sbjct: 95  IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 154
Query: 438 LIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IYEHGANPQTTHI 496
              +A+ + YL    +Q+ +HRD+   N+L+      K+ DFGLA+ I       +TT+ 
Sbjct: 155 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 211
Query: 497 VGTLGYLAPELTRTGKATTSTDVYSYGILMLEV 529
              + ++APE       T  +DV+S+G+LM E+
Sbjct: 212 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 244

>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In Complex With Arq 069 Length = 313

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/213 (23%), Positives = 95/213 (44%), Gaps = 24/213 (11%)
Query: 338 VGSGGFGRVYRGLM-------PSLGLEVAIKRIGHN-SQQGMKEFVAEIMSMGRL-RHRN 388
           +G G FG+V            P   + VA+K +  + +++ + + V+E+  M  + +H+N
Sbjct: 32  LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXX-----------XXXXXXXTWDQRYKI 437
           ++ L G C +   L ++ +Y   G+                           T+      
Sbjct: 92  IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 151
Query: 438 LIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IYEHGANPQTTHI 496
              +A+ + YL    +Q+ +HRD+   N+L+      K+ DFGLA+ I       +TT+ 
Sbjct: 152 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 208
Query: 497 VGTLGYLAPELTRTGKATTSTDVYSYGILMLEV 529
              + ++APE       T  +DV+S+G+LM E+
Sbjct: 209 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 241

>pdb|3B2T|A Chain A, Structure Of Phosphotransferase Length = 311

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/213 (23%), Positives = 95/213 (44%), Gaps = 24/213 (11%)
Query: 338 VGSGGFGRVYRGLM-------PSLGLEVAIKRIGHN-SQQGMKEFVAEIMSMGRL-RHRN 388
           +G G FG+V            P   + VA+K +  + +++ + + V+E+  M  + +H+N
Sbjct: 30  LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXX-----------XXXXXXXTWDQRYKI 437
           ++ L G C +   L ++ +Y   G+                           T+      
Sbjct: 90  IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 149
Query: 438 LIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IYEHGANPQTTHI 496
              +A+ + YL    +Q+ +HRD+   N+L+      K+ DFGLA+ I       +TT+ 
Sbjct: 150 TYQLARGMEYL---ASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 206
Query: 497 VGTLGYLAPELTRTGKATTSTDVYSYGILMLEV 529
              + ++APE       T  +DV+S+G+LM E+
Sbjct: 207 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 239

>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide Substrate Complex: Kinase Substrate Recognition Length = 277

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/219 (25%), Positives = 91/219 (41%), Gaps = 26/219 (11%)
Query: 330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRI-----GHNSQQGMKEF-VAEIMSMGR 383
           + +  + ++G G    V R +      E A+K I     G  S + ++E   A +  +  
Sbjct: 4   ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 63
Query: 384 LR----HRNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILI 439
           LR    H N++QL           LV+D +  G                    +  KI+ 
Sbjct: 64  LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEK-----ETRKIMR 118
Query: 440 GIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGT 499
            + + +  LH+     +VHRD+KP NILLD  +N KL DFG +   + G   +   + GT
Sbjct: 119 ALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE--KLREVCGT 173
Query: 500 LGYLAPELTRTGKATT------STDVYSYGILMLEVACG 532
             YLAPE+                D++S G++M  +  G
Sbjct: 174 PSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 212

>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With Y- 27632 Length = 350

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 84/198 (42%), Gaps = 15/198 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRN---LVQLHG 394
           +G+G FGRV        G   A+K +       +K+    +     L+  N   LV+L  
Sbjct: 49  IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 395 WCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQ 454
             +    L +V +Y+P G                  +         I  +  YLH   + 
Sbjct: 109 SFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLH---SL 160
Query: 455 RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKAT 514
            +++RD+KP N+L+D     K+ DFG AK        +T  + GT  YLAPE+  +    
Sbjct: 161 DLIYRDLKPENLLIDQQGYIKVADFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 515 TSTDVYSYGILMLEVACG 532
            + D ++ G+L+ E+A G
Sbjct: 217 KAVDWWALGVLIYEMAAG 234

>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase Length = 350

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 84/198 (42%), Gaps = 15/198 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRN---LVQLHG 394
           +G+G FGRV        G   A+K +       +K+    +     L+  N   LV+L  
Sbjct: 49  IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 395 WCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQ 454
             +    L +V +Y+P G                  +         I  +  YLH   + 
Sbjct: 109 SFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLH---SL 160
Query: 455 RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKAT 514
            +++RD+KP N+L+D     K+ DFG AK        +T  + GT  YLAPE+  +    
Sbjct: 161 DLIYRDLKPENLLIDQQGYIKVADFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 515 TSTDVYSYGILMLEVACG 532
            + D ++ G+L+ E+A G
Sbjct: 217 KAVDWWALGVLIYEMAAG 234

>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits Length = 689

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 56/92 (60%), Gaps = 4/92 (4%)
Query: 442 AQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLG 501
           A+ +L L    N+ VV+RD+KP+NILLD + + ++ D GLA  +     P  +  VGT G
Sbjct: 299 AEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSK-KKPHAS--VGTHG 355
Query: 502 YLAPELTRTGKA-TTSTDVYSYGILMLEVACG 532
           Y+APE+ + G A  +S D +S G ++ ++  G
Sbjct: 356 YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387

>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 84/198 (42%), Gaps = 15/198 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRN---LVQLHG 394
           +G+G FGRV        G   A+K +       +KE    +     L+  N   LV+L  
Sbjct: 49  LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 395 WCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQ 454
             +    L +V +Y P G                  +         I  +  YLH   + 
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLH---SL 160
Query: 455 RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKAT 514
            +++RD+KP N+++D     K+ DFGLAK        +T  + GT  YLAPE+  +    
Sbjct: 161 DLIYRDLKPENLMIDQQGYIKVTDFGLAK----RVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 515 TSTDVYSYGILMLEVACG 532
            + D ++ G+L+ E+A G
Sbjct: 217 KAVDWWALGVLIYEMAAG 234

>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147 Length = 429

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 60/237 (25%), Positives = 98/237 (41%), Gaps = 43/237 (18%)
Query: 326 ASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQ--GMKEFVAEIMSMGR 383
             V   +  ++L+G G +G VY     +    VAIK++    +     K  + EI  + R
Sbjct: 24  VKVPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNR 83
Query: 384 LRHRNLVQLHGWC-----RKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKIL 438
           L+   +++LH         K DEL +V +   +                  T    Y +L
Sbjct: 84  LKSDYIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKTI--LYNLL 141
Query: 439 IGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE------------ 486
           +G      ++HE     ++HRD+KP+N LL+   + K+ DFGLA+               
Sbjct: 142 LGEK----FIHESG---IIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLE 194
Query: 487 ----------HGANPQ---TTHIVGTLGYLAPELTRTGKA-TTSTDVYSYGILMLEV 529
                     H  N +   T+H+V T  Y APEL    +  T S D++S G +  E+
Sbjct: 195 EKEENEEPGPHNKNLKKQLTSHVV-TRWYRAPELILLQENYTNSIDIWSTGCIFAEL 250

>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol (Soak) Length = 688

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 56/92 (60%), Gaps = 4/92 (4%)
Query: 442 AQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLG 501
           A+ +L L    N+ VV+RD+KP+NILLD + + ++ D GLA  +     P  +  VGT G
Sbjct: 298 AEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSK-KKPHAS--VGTHG 354
Query: 502 YLAPELTRTGKA-TTSTDVYSYGILMLEVACG 532
           Y+APE+ + G A  +S D +S G ++ ++  G
Sbjct: 355 YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 386

>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K641r Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/213 (23%), Positives = 95/213 (44%), Gaps = 24/213 (11%)
Query: 338 VGSGGFGRVYRGLM-------PSLGLEVAIKRIGHN-SQQGMKEFVAEIMSMGRL-RHRN 388
           +G G FG+V            P   + VA+K +  + +++ + + V+E+  M  + +H+N
Sbjct: 43  LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXX-----------XXXXXXXTWDQRYKI 437
           ++ L G C +   L ++ +Y   G+                           T+      
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 438 LIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IYEHGANPQTTHI 496
              +A+ + YL    +Q+ +HRD+   N+L+      ++ DFGLA+ I       +TT+ 
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNG 219
Query: 497 VGTLGYLAPELTRTGKATTSTDVYSYGILMLEV 529
              + ++APE       T  +DV+S+G+LM E+
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252

>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled Receptor Kinase 2 And Heterotrimeric G Protein Beta 1 And Gamma 2 Subunits Length = 689

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 36/100 (36%), Positives = 57/100 (57%), Gaps = 4/100 (4%)
Query: 442 AQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLG 501
           A+ +L L    N+ VV+RD+KP+NILLD + + ++ D GLA  +     P  +  VGT G
Sbjct: 299 AEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSK-KKPHAS--VGTHG 355
Query: 502 YLAPELTRTGKA-TTSTDVYSYGILMLEVACGRRSIEPQK 540
           Y+APE+ + G A  +S D +S G ++ ++  G       K
Sbjct: 356 YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHK 395

>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits Length = 695

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 36/100 (36%), Positives = 57/100 (57%), Gaps = 4/100 (4%)
Query: 442 AQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLG 501
           A+ +L L    N+ VV+RD+KP+NILLD + + ++ D GLA  +     P  +  VGT G
Sbjct: 299 AEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSK-KKPHAS--VGTHG 355
Query: 502 YLAPELTRTGKA-TTSTDVYSYGILMLEVACGRRSIEPQK 540
           Y+APE+ + G A  +S D +S G ++ ++  G       K
Sbjct: 356 YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHK 395

>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif Mutants In Response To Inhibitor Binding Length = 360

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 90/207 (43%), Gaps = 19/207 (9%)
Query: 335 QNL--VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGM--KEFVAEIMSMGRLRHRN-- 388
           QNL  VGSG +G V        GL VA+K++    Q  +  K    E+  +  ++H N  
Sbjct: 25  QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 84
Query: 389 -LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
            L+ +    R  +E   VY      +                T D    ++  I + L Y
Sbjct: 85  GLLDVFTPARSLEEFNDVYLV----THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
           +H   +  ++HRD+KPSN+ ++     K+  FGLA+      + + T  V T  Y APE+
Sbjct: 141 IH---SADIIHRDLKPSNLAVNEDCELKILGFGLAR----HTDDEMTGYVATRWYRAPEI 193
Query: 508 TRTGKATTST-DVYSYGILMLEVACGR 533
                    T D++S G +M E+  GR
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|3ZVX|A Chain A, Structure Of The Lectin From Platypodium Elegans In Complex With A Trimannoside Length = 261

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/263 (25%), Positives = 110/263 (41%), Gaps = 37/263 (14%)
Query: 1   MVVVHADTTSFLYNGFLH-----ANLSLEGAAYISTSGILTVTNKS------EGLIGHAL 49
           M++  A++T  L   F++      NL  +G A+ S + IL +T            +G  L
Sbjct: 1   MLLNRANSTDSLSFSFINFDRDERNLIFQGDAHTSRNNILQLTRTDSNGAPVRSTVGRIL 60
Query: 50  YPNPLRFKTSNKSVAIDFRTNFVFSILPKYPDLGGQGLAFIII--STNRPENCLANQFLG 107
           +   +R    + +   + +T F F +     +    G+AF I    T  P    A   LG
Sbjct: 61  HSAQVRLWEKSTNRVANLQTQFSFFLSSPLSN-PADGIAFFIAPPDTTIPSGS-AGGLLG 118
Query: 108 L--PNITMSSSTKFSTRMLAVEFDII--QNTELIDINDNHVGIDXXXXXXXXXXXXXYYS 163
           L  P   ++ S   + ++LAVEFD    QN+   D N  H+GID                
Sbjct: 119 LFNPRTALNES---ANQVLAVEFDTFFAQNSNTWDPNYQHIGIDVNSIRSSKV------- 168
Query: 164 GNNHRIPILLRSGDPIQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYM 223
                +    R G  +   V Y+     I+V       P   R  +S  +DL++++ E++
Sbjct: 169 -----VRWERREGKTLNVLVTYNPSTRTIDVVAT---YPDGQRYQLSHVVDLTTILPEWV 220
Query: 224 YTGFSASTGLITASHNVHGWSIS 246
             GFSA++G    +HN+  WS +
Sbjct: 221 RVGFSAASGEQFQTHNLESWSFT 243

>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/221 (24%), Positives = 96/221 (43%), Gaps = 15/221 (6%)
Query: 338 VGSGGFGRVYRGLMPSLG-----LEVAIKRIGH-NSQQGMKEFVAEIMSMGRLRHRNLVQ 391
           +G G FG VY G +  +      L+VA+K +    S+Q   +F+ E + + +L H+N+V+
Sbjct: 53  LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 392 LHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIG--IAQSLLYLH 449
             G   +     ++ + +  G                 +      + +   IA    YL 
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 450 EECNQRVVHRDVKPSNILLDTY---LNAKLGDFGLAK-IYEHGANPQTTHIVGTLGYLAP 505
           E      +HRD+   N LL        AK+GDFG+A+ IY      +    +  + ++ P
Sbjct: 173 E---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 506 ELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELL 546
           E    G  T+ TD +S+G+L+ E+        P K+  E+L
Sbjct: 230 EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL 270

>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/221 (24%), Positives = 96/221 (43%), Gaps = 15/221 (6%)
Query: 338 VGSGGFGRVYRGLMPSLG-----LEVAIKRIGH-NSQQGMKEFVAEIMSMGRLRHRNLVQ 391
           +G G FG VY G +  +      L+VA+K +    S+Q   +F+ E + + +L H+N+V+
Sbjct: 39  LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 392 LHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIG--IAQSLLYLH 449
             G   +     ++ + +  G                 +      + +   IA    YL 
Sbjct: 99  CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 450 EECNQRVVHRDVKPSNILLDTY---LNAKLGDFGLAK-IYEHGANPQTTHIVGTLGYLAP 505
           E      +HRD+   N LL        AK+GDFG+A+ IY      +    +  + ++ P
Sbjct: 159 E---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 215
Query: 506 ELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELL 546
           E    G  T+ TD +S+G+L+ E+        P K+  E+L
Sbjct: 216 EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL 256

>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1 Length = 304

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 60/276 (21%), Positives = 115/276 (41%), Gaps = 29/276 (10%)
Query: 338 VGSGGFGRVYRGLMPSL-----GLEVAIKRIGHNSQQGMK-EFVAEIMSMGRLRHRNLVQ 391
           +G G FG VY G+   +        VAIK +   +    + EF+ E   M      ++V+
Sbjct: 23  LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 82
Query: 392 LHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXX-----XXXTWDQRYKILIGIAQSLL 446
           L G   +    L++ + +  G                      +  +  ++   IA  + 
Sbjct: 83  LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMA 142
Query: 447 YLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IYEHGANPQTTHIVGTLGYLAP 505
           YL+     + VHRD+   N ++      K+GDFG+ + IYE     +    +  + +++P
Sbjct: 143 YLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 199
Query: 506 ELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAID 565
           E  + G  TT +DV+S+G+++ E+A    + +P +  +   ++ +V    +EG +    D
Sbjct: 200 ESLKDGVFTTYSDVWSFGVVLWEIAT--LAEQPYQGLSNEQVLRFV----MEGGLLDKPD 253
Query: 566 QTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVV 601
              D        ++  L   C   NP  RP    ++
Sbjct: 254 NCPD--------MLFELMRMCWQYNPKMRPSFLEII 281

>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain (2p) In Complex With A Bis-Azaindole Inhibitor Length = 336

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 60/276 (21%), Positives = 115/276 (41%), Gaps = 29/276 (10%)
Query: 338 VGSGGFGRVYRGLMPSL-----GLEVAIKRIGHNSQQGMK-EFVAEIMSMGRLRHRNLVQ 391
           +G G FG VY G+   +        VAIK +   +    + EF+ E   M      ++V+
Sbjct: 55  LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 114
Query: 392 LHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXX-----XXXTWDQRYKILIGIAQSLL 446
           L G   +    L++ + +  G                      +  +  ++   IA  + 
Sbjct: 115 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 174
Query: 447 YLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IYEHGANPQTTHIVGTLGYLAP 505
           YL+     + VHRD+   N ++      K+GDFG+ + IYE     +    +  + +++P
Sbjct: 175 YLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 231
Query: 506 ELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAID 565
           E  + G  TT +DV+S+G+++ E+A    + +P +  +   ++ +V    +EG +    D
Sbjct: 232 ESLKDGVFTTYSDVWSFGVVLWEIAT--LAEQPYQGLSNEQVLRFV----MEGGLLDKPD 285
Query: 566 QTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVV 601
              D        ++  L   C   NP  RP    ++
Sbjct: 286 NCPD--------MLFELMRMCWQYNPKMRPSFLEII 313

>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain Length = 308

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 60/276 (21%), Positives = 115/276 (41%), Gaps = 29/276 (10%)
Query: 338 VGSGGFGRVYRGLMPSL-----GLEVAIKRIGHNSQQGMK-EFVAEIMSMGRLRHRNLVQ 391
           +G G FG VY G+   +        VAIK +   +    + EF+ E   M      ++V+
Sbjct: 27  LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 392 LHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXX-----XXXTWDQRYKILIGIAQSLL 446
           L G   +    L++ + +  G                      +  +  ++   IA  + 
Sbjct: 87  LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 146
Query: 447 YLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IYEHGANPQTTHIVGTLGYLAP 505
           YL+     + VHRD+   N ++      K+GDFG+ + IYE     +    +  + +++P
Sbjct: 147 YLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 203
Query: 506 ELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAID 565
           E  + G  TT +DV+S+G+++ E+A    + +P +  +   ++ +V    +EG +    D
Sbjct: 204 ESLKDGVFTTYSDVWSFGVVLWEIAT--LAEQPYQGLSNEQVLRFV----MEGGLLDKPD 257
Query: 566 QTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVV 601
              D        ++  L   C   NP  RP    ++
Sbjct: 258 NCPD--------MLFELMRMCWQYNPKMRPSFLEII 285

>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine 8 Length = 301

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 60/276 (21%), Positives = 115/276 (41%), Gaps = 29/276 (10%)
Query: 338 VGSGGFGRVYRGLMPSL-----GLEVAIKRIGHNSQQGMK-EFVAEIMSMGRLRHRNLVQ 391
           +G G FG VY G+   +        VAIK +   +    + EF+ E   M      ++V+
Sbjct: 20  LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 392 LHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXX-----XXXTWDQRYKILIGIAQSLL 446
           L G   +    L++ + +  G                      +  +  ++   IA  + 
Sbjct: 80  LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 139
Query: 447 YLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IYEHGANPQTTHIVGTLGYLAP 505
           YL+     + VHRD+   N ++      K+GDFG+ + IYE     +    +  + +++P
Sbjct: 140 YLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 196
Query: 506 ELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAID 565
           E  + G  TT +DV+S+G+++ E+A    + +P +  +   ++ +V    +EG +    D
Sbjct: 197 ESLKDGVFTTYSDVWSFGVVLWEIAT--LAEQPYQGLSNEQVLRFV----MEGGLLDKPD 250
Query: 566 QTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVV 601
              D        ++  L   C   NP  RP    ++
Sbjct: 251 NCPD--------MLFELMRMCWQYNPKMRPSFLEII 278

>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 90/207 (43%), Gaps = 19/207 (9%)
Query: 335 QNL--VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGM--KEFVAEIMSMGRLRHRN-- 388
           QNL  VGSG +G V        GL VA+K++    Q  +  K    E+  +  ++H N  
Sbjct: 25  QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 84
Query: 389 -LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
            L+ +    R  +E   VY      +                T D    ++  I + L Y
Sbjct: 85  GLLDVFTPARSLEEFNDVYLV----THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
           +H   +  ++HRD+KPSN+ ++     K+ D GLA+      + + T  V T  Y APE+
Sbjct: 141 IH---SADIIHRDLKPSNLAVNEDCELKILDAGLAR----HTDDEMTGYVATRWYRAPEI 193
Query: 508 TRTGKATTST-DVYSYGILMLEVACGR 533
                    T D++S G +M E+  GR
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a Resolution. Length = 322

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 60/276 (21%), Positives = 115/276 (41%), Gaps = 29/276 (10%)
Query: 338 VGSGGFGRVYRGLMPSL-----GLEVAIKRIGHNSQQGMK-EFVAEIMSMGRLRHRNLVQ 391
           +G G FG VY G+   +        VAIK +   +    + EF+ E   M      ++V+
Sbjct: 33  LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 392 LHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXX-----XXXTWDQRYKILIGIAQSLL 446
           L G   +    L++ + +  G                      +  +  ++   IA  + 
Sbjct: 93  LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMA 152
Query: 447 YLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IYEHGANPQTTHIVGTLGYLAP 505
           YL+     + VHRD+   N ++      K+GDFG+ + IYE     +    +  + +++P
Sbjct: 153 YLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 209
Query: 506 ELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAID 565
           E  + G  TT +DV+S+G+++ E+A    + +P +  +   ++ +V    +EG +    D
Sbjct: 210 ESLKDGVFTTYSDVWSFGVVLWEIAT--LAEQPYQGLSNEQVLRFV----MEGGLLDKPD 263
Query: 566 QTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVV 601
              D        ++  L   C   NP  RP    ++
Sbjct: 264 NCPD--------MLFELMRMCWQYNPKMRPSFLEII 291

>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In A Putative Auto-Inhibition State Length = 340

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/111 (35%), Positives = 59/111 (53%), Gaps = 26/111 (23%)
Query: 436 KILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGL--------AKIYEH 487
           KI + I ++L +LH + +  V+HRDVKPSN+L++     K+ DFG+        AK  + 
Sbjct: 157 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDA 214
Query: 488 GANPQTTHIVGTLGYLA-----PELTRTGKATTSTDVYSYGILMLEVACGR 533
           G  P          Y+A     PEL + G +  S D++S GI M+E+A  R
Sbjct: 215 GCKP----------YMAPERINPELNQKGYSVKS-DIWSLGITMIELAILR 254

>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase Length = 353

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/202 (26%), Positives = 90/202 (44%), Gaps = 18/202 (8%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGM--KEFVAEIMSMGRLRHRNLVQLHGW 395
           VGSG +G V   +    G +VAIK++    Q  +  K    E++ +  ++H N++ L   
Sbjct: 32  VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 91
Query: 396 CRKQDELLLVYDY---VPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEEC 452
                 L   YD+   +P                    +     ++  + + L Y+H   
Sbjct: 92  FTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQY-----LVYQMLKGLKYIH--- 143
Query: 453 NQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGK 512
           +  VVHRD+KP N+ ++     K+ DFGLA+     A+ + T  V T  Y APE+  +  
Sbjct: 144 SAGVVHRDLKPGNLAVNEDCELKILDFGLAR----HADAEMTGYVVTRWYRAPEVILSWM 199
Query: 513 ATTST-DVYSYGILMLEVACGR 533
               T D++S G +M E+  G+
Sbjct: 200 HYNQTVDIWSVGCIMAEMLTGK 221

>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit Calpha 2 Length = 343

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 84/198 (42%), Gaps = 15/198 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRN---LVQLHG 394
           +G+G FGRV        G   A+K +       +K+    +     L+  N   LV+L  
Sbjct: 42  LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 101
Query: 395 WCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQ 454
             +    L +V +YVP G                  +         I  +  YLH   + 
Sbjct: 102 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLH---SL 153
Query: 455 RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKAT 514
            +++RD+KP N+L+D     ++ DFG AK        +T  + GT  YLAPE+  +    
Sbjct: 154 DLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYN 209
Query: 515 TSTDVYSYGILMLEVACG 532
            + D ++ G+L+ E+A G
Sbjct: 210 KAVDWWALGVLIYEMAAG 227

>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth Factor-1 Receptor Kinase Domain Length = 322

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 60/276 (21%), Positives = 115/276 (41%), Gaps = 29/276 (10%)
Query: 338 VGSGGFGRVYRGLMPSL-----GLEVAIKRIGHNSQQGMK-EFVAEIMSMGRLRHRNLVQ 391
           +G G FG VY G+   +        VAIK +   +    + EF+ E   M      ++V+
Sbjct: 33  LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 392 LHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXX-----XXXTWDQRYKILIGIAQSLL 446
           L G   +    L++ + +  G                      +  +  ++   IA  + 
Sbjct: 93  LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 152
Query: 447 YLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IYEHGANPQTTHIVGTLGYLAP 505
           YL+     + VHRD+   N ++      K+GDFG+ + IYE     +    +  + +++P
Sbjct: 153 YLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 209
Query: 506 ELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAID 565
           E  + G  TT +DV+S+G+++ E+A    + +P +  +   ++ +V    +EG +    D
Sbjct: 210 ESLKDGVFTTYSDVWSFGVVLWEIAT--LAEQPYQGLSNEQVLRFV----MEGGLLDKPD 263
Query: 566 QTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVV 601
              D        ++  L   C   NP  RP    ++
Sbjct: 264 NCPD--------MLFELMRMCWQYNPKMRPSFLEII 291

>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex With An Hydantoin Inhibitor Length = 305

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 60/276 (21%), Positives = 115/276 (41%), Gaps = 29/276 (10%)
Query: 338 VGSGGFGRVYRGLMPSL-----GLEVAIKRIGHNSQQGMK-EFVAEIMSMGRLRHRNLVQ 391
           +G G FG VY G+   +        VAIK +   +    + EF+ E   M      ++V+
Sbjct: 24  LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 83
Query: 392 LHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXX-----XXXTWDQRYKILIGIAQSLL 446
           L G   +    L++ + +  G                      +  +  ++   IA  + 
Sbjct: 84  LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 143
Query: 447 YLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IYEHGANPQTTHIVGTLGYLAP 505
           YL+     + VHRD+   N ++      K+GDFG+ + IYE     +    +  + +++P
Sbjct: 144 YLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 200
Query: 506 ELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAID 565
           E  + G  TT +DV+S+G+++ E+A    + +P +  +   ++ +V    +EG +    D
Sbjct: 201 ESLKDGVFTTYSDVWSFGVVLWEIAT--LAEQPYQGLSNEQVLRFV----MEGGLLDKPD 254
Query: 566 QTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVV 601
              D        ++  L   C   NP  RP    ++
Sbjct: 255 NCPD--------MLFELMRMCWQYNPKMRPSFLEII 282

>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 90/207 (43%), Gaps = 19/207 (9%)
Query: 335 QNL--VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGM--KEFVAEIMSMGRLRHRN-- 388
           QNL  VGSG +G V        GL VA+K++    Q  +  K    E+  +  ++H N  
Sbjct: 25  QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 84
Query: 389 -LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
            L+ +    R  +E   VY      +                T D    ++  I + L Y
Sbjct: 85  GLLDVFTPARSLEEFNDVYLV----THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
           +H   +  ++HRD+KPSN+ ++     K+ D GLA+      + + T  V T  Y APE+
Sbjct: 141 IH---SADIIHRDLKPSNLAVNEDCELKILDRGLAR----HTDDEMTGYVATRWYRAPEI 193
Query: 508 TRTGKATTST-DVYSYGILMLEVACGR 533
                    T D++S G +M E+  GR
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor (Igf-1r-Wt) Complex With Bms-754807 [1-(4-((5-Cyclopropyl- 1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2, 4]triazin-2-Yl)-N- (6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide] Length = 315

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 60/276 (21%), Positives = 115/276 (41%), Gaps = 29/276 (10%)
Query: 338 VGSGGFGRVYRGLMPSL-----GLEVAIKRIGHNSQQGMK-EFVAEIMSMGRLRHRNLVQ 391
           +G G FG VY G+   +        VAIK +   +    + EF+ E   M      ++V+
Sbjct: 26  LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 392 LHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXX-----XXXTWDQRYKILIGIAQSLL 446
           L G   +    L++ + +  G                      +  +  ++   IA  + 
Sbjct: 86  LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 145
Query: 447 YLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IYEHGANPQTTHIVGTLGYLAP 505
           YL+     + VHRD+   N ++      K+GDFG+ + IYE     +    +  + +++P
Sbjct: 146 YLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 202
Query: 506 ELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAID 565
           E  + G  TT +DV+S+G+++ E+A    + +P +  +   ++ +V    +EG +    D
Sbjct: 203 ESLKDGVFTTYSDVWSFGVVLWEIAT--LAEQPYQGLSNEQVLRFV----MEGGLLDKPD 256
Query: 566 QTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVV 601
              D        ++  L   C   NP  RP    ++
Sbjct: 257 NCPD--------MLFELMRMCWQYNPKMRPSFLEII 284

>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38) Length = 360

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 89/207 (42%), Gaps = 19/207 (9%)
Query: 335 QNL--VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGM--KEFVAEIMSMGRLRHRN-- 388
           QNL  VGSG +G V        G  VA+K++    Q  +  K    E+  +  ++H N  
Sbjct: 25  QNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 84
Query: 389 -LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
            L+ +    R  +E   VY      +                T D    ++  I + L Y
Sbjct: 85  GLLDVFTPARSLEEFNDVYLV----THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
           +H   +  ++HRD+KPSN+ ++     K+ DFGLA+      + +    V T  Y APE+
Sbjct: 141 IH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMAGFVATRWYRAPEI 193
Query: 508 TRTGKATTST-DVYSYGILMLEVACGR 533
                    T D++S G +M E+  GR
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain In Complex With A Monocyclic Pyrazolone Inhibitor Length = 360

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 89/207 (42%), Gaps = 19/207 (9%)
Query: 335 QNL--VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGM--KEFVAEIMSMGRLRHRN-- 388
           QNL  VGSG +G V        G  VA+K++    Q  +  K    E+  +  ++H N  
Sbjct: 25  QNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 84
Query: 389 -LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
            L+ +    R  +E   VY      +                T D    ++  I + L Y
Sbjct: 85  GLLDVFTPARSLEEFNDVYLV----THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
           +H   +  ++HRD+KPSN+ ++     K+ DFGLA+      + +    V T  Y APE+
Sbjct: 141 IH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMAGFVATRWYRAPEI 193
Query: 508 TRTGKATTST-DVYSYGILMLEVACGR 533
                    T D++S G +M E+  GR
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With Inhibitor Pg-874743 Length = 348

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 89/207 (42%), Gaps = 19/207 (9%)
Query: 335 QNL--VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGM--KEFVAEIMSMGRLRHRN-- 388
           QNL  VGSG +G V        G  VA+K++    Q  +  K    E+  +  ++H N  
Sbjct: 21  QNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 80
Query: 389 -LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
            L+ +    R  +E   VY      +                T D    ++  I + L Y
Sbjct: 81  GLLDVFTPARSLEEFNDVYLV----THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 136
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
           +H   +  ++HRD+KPSN+ ++     K+ DFGLA+      + +    V T  Y APE+
Sbjct: 137 IH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMAGFVATRWYRAPEI 189
Query: 508 TRTGKATTST-DVYSYGILMLEVACGR 533
                    T D++S G +M E+  GR
Sbjct: 190 MLNWMHYNQTVDIWSVGCIMAELLTGR 216

>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant Length = 334

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 96/203 (47%), Gaps = 22/203 (10%)
Query: 333 GEQNLVGSGGFGRVYRGLMPSLGLEVAIK----RIGHNSQQGM--KEFVAEIMSMGRLRH 386
           GE+  +GSG F  V +    S GL+ A K    R   +S++G+  ++   E+  +  ++H
Sbjct: 16  GEE--LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQH 73
Query: 387 RNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLL 446
            N++ LH     + +++L+ + V  G                 T ++  + L  I   + 
Sbjct: 74  PNVITLHEVYENKTDVILILELVAGGE-----LFDFLAEKESLTEEEATEFLKQILNGVY 128
Query: 447 YLHEECNQRVVHRDVKPSNI-LLDTYL---NAKLGDFGLAKIYEHGANPQTTHIVGTLGY 502
           YLH   + ++ H D+KP NI LLD  +     K+ DFGLA   + G   +  +I GT  +
Sbjct: 129 YLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN--EFKNIFGTPAF 183
Query: 503 LAPELTRTGKATTSTDVYSYGIL 525
           +APE+          D++S G++
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVI 206

>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565g Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/213 (23%), Positives = 94/213 (44%), Gaps = 24/213 (11%)
Query: 338 VGSGGFGRVYRGLM-------PSLGLEVAIKRIGHN-SQQGMKEFVAEIMSMGRL-RHRN 388
           +G G FG+V            P   + VA+K +  + +++ + + V+E+  M  + +H+N
Sbjct: 43  LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXX-----------XXXXXXXTWDQRYKI 437
           ++ L G C +   L ++  Y   G+                           T+      
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 438 LIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IYEHGANPQTTHI 496
              +A+ + YL    +Q+ +HRD+   N+L+      K+ DFGLA+ I       +TT+ 
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 497 VGTLGYLAPELTRTGKATTSTDVYSYGILMLEV 529
              + ++APE       T  +DV+S+G+LM E+
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252

>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1 Receptor Kinase In Complex With Pqip Length = 301

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 61/276 (22%), Positives = 115/276 (41%), Gaps = 29/276 (10%)
Query: 338 VGSGGFGRVYRGLMPSL-----GLEVAIKRIGHNSQQGMK-EFVAEIMSMGRLRHRNLVQ 391
           +G G FG VY G+   +        VAIK +   +    + EF+ E   M      ++V+
Sbjct: 20  LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 392 LHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXX-----XXXTWDQRYKILIGIAQSLL 446
           L G   +    L++ + +  G                      +  +  ++   IA  + 
Sbjct: 80  LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 139
Query: 447 YLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IYEHGANPQTTHIVGTLGYLAP 505
           YL+     + VHRD+   N  +      K+GDFG+ + IYE     +    +  + +++P
Sbjct: 140 YLN---ANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 196
Query: 506 ELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAID 565
           E  + G  TT +DV+S+G+++ E+A    + +P +  +   ++ +V    +EG +    D
Sbjct: 197 ESLKDGVFTTYSDVWSFGVVLWEIAT--LAEQPYQGLSNEQVLRFV----MEGGLLDKPD 250
Query: 566 QTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVV 601
              D        ++L L   C   NP  RP    ++
Sbjct: 251 NCPD--------MLLELMRMCWQYNPKMRPSFLEII 278

>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In Complex With Ca2+ And Amppnp Length = 494

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 88/200 (44%), Gaps = 16/200 (8%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNS--QQGMKEFVAEIMSMGRLRHRNLVQLHGW 395
           +GSG +G V         +E AIK I   S       + + E+  +  L H N+++L+ +
Sbjct: 45  LGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDF 104
Query: 396 CRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQR 455
              +    LV +    G                        I+  +   + YLH+     
Sbjct: 105 FEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAV-----IIKQVLSGVTYLHK---HN 156
Query: 456 VVHRDVKPSNILLDTYLNA---KLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGK 512
           +VHRD+KP N+LL++       K+ DFGL+ ++E+    +    +GT  Y+APE+ R  K
Sbjct: 157 IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFEN--QKKMKERLGTAYYIAPEVLRK-K 213
Query: 513 ATTSTDVYSYGILMLEVACG 532
                DV+S G+++  +  G
Sbjct: 214 YDEKCDVWSIGVILFILLAG 233

>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With Inhibitor Jnj- 7706621 Length = 351

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 85/199 (42%), Gaps = 17/199 (8%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHR----NLVQLH 393
           +G+G FGRV        G   A+K +       +K+ +   ++  R++       LV+L 
Sbjct: 50  LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQ-IEHTLNEKRIQQAVNFPFLVKLE 108
Query: 394 GWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECN 453
              +    L +V +Y P G                  +         I  +  YLH   +
Sbjct: 109 FSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLH---S 160
Query: 454 QRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKA 513
             +++RD+KP N+L+D     K+ DFG AK        +T  + GT  YLAPE+  +   
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIKVADFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGY 216
Query: 514 TTSTDVYSYGILMLEVACG 532
             + D ++ G+L+ E+A G
Sbjct: 217 NKAVDWWALGVLIYEMAAG 235

>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565a Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/213 (23%), Positives = 94/213 (44%), Gaps = 24/213 (11%)
Query: 338 VGSGGFGRVYRGLM-------PSLGLEVAIKRIGHN-SQQGMKEFVAEIMSMGRL-RHRN 388
           +G G FG+V            P   + VA+K +  + +++ + + V+E+  M  + +H+N
Sbjct: 43  LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXX-----------XXXXXXXTWDQRYKI 437
           ++ L G C +   L ++  Y   G+                           T+      
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 438 LIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IYEHGANPQTTHI 496
              +A+ + YL    +Q+ +HRD+   N+L+      K+ DFGLA+ I       +TT+ 
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 497 VGTLGYLAPELTRTGKATTSTDVYSYGILMLEV 529
              + ++APE       T  +DV+S+G+LM E+
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252

>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A Benzimidazole Inhibitor Length = 307

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 60/276 (21%), Positives = 115/276 (41%), Gaps = 29/276 (10%)
Query: 338 VGSGGFGRVYRGLMPSL-----GLEVAIKRIGHNSQQGMK-EFVAEIMSMGRLRHRNLVQ 391
           +G G FG VY G+   +        VAIK +   +    + EF+ E   M      ++V+
Sbjct: 26  LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 392 LHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXX-----XXXTWDQRYKILIGIAQSLL 446
           L G   +    L++ + +  G                      +  +  ++   IA  + 
Sbjct: 86  LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 145
Query: 447 YLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IYEHGANPQTTHIVGTLGYLAP 505
           YL+     + VHRD+   N ++      K+GDFG+ + IYE     +    +  + +++P
Sbjct: 146 YLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 202
Query: 506 ELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAID 565
           E  + G  TT +DV+S+G+++ E+A    + +P +  +   ++ +V    +EG +    D
Sbjct: 203 ESLKDGVFTTYSDVWSFGVVLWEIAT--LAEQPYQGLSNEQVLRFV----MEGGLLDKPD 256
Query: 566 QTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVV 601
              D        ++  L   C   NP  RP    ++
Sbjct: 257 NCPD--------MLFELMRMCWQYNPKMRPSFLEII 284

>pdb|4EXU|A Chain A, Mapk13, Inactive Form Length = 371

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/202 (26%), Positives = 90/202 (44%), Gaps = 18/202 (8%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGM--KEFVAEIMSMGRLRHRNLVQLHGW 395
           VGSG +G V   +    G +VAIK++    Q  +  K    E++ +  ++H N++ L   
Sbjct: 50  VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 109
Query: 396 CRKQDELLLVYDY---VPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEEC 452
                 L   YD+   +P                    +     ++  + + L Y+H   
Sbjct: 110 FTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQY-----LVYQMLKGLKYIH--- 161
Query: 453 NQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGK 512
           +  VVHRD+KP N+ ++     K+ DFGLA+     A+ + T  V T  Y APE+  +  
Sbjct: 162 SAGVVHRDLKPGNLAVNEDCELKILDFGLAR----HADAEMTGYVVTRWYRAPEVILSWM 217
Query: 513 ATTST-DVYSYGILMLEVACGR 533
               T D++S G +M E+  G+
Sbjct: 218 HYNQTVDIWSVGCIMAEMLTGK 239

>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2 Length = 343

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 85/198 (42%), Gaps = 15/198 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRN---LVQLHG 394
           +G+G FGRV        G   A+K +       +K+    +     L+  N   LV+L  
Sbjct: 42  LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 101
Query: 395 WCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQ 454
             +    L +V +YVP G                  +         I  +  YLH   + 
Sbjct: 102 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-----YAAQIVLTFEYLH---SL 153
Query: 455 RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKAT 514
            +++RD+KP N+L+D     ++ DFG AK        +T  + GT  YLAPE+  +    
Sbjct: 154 DLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYN 209
Query: 515 TSTDVYSYGILMLEVACG 532
            + D ++ G+L+ E+A G
Sbjct: 210 KAVDWWALGVLIYEMAAG 227

>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of Camp-Dependent Protein Kinase And An Inhibitor Peptide Displays An Open Conformation Length = 350

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 84/198 (42%), Gaps = 15/198 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRN---LVQLHG 394
           +G+G FGRV        G   A+K +       +K+    +     L+  N   LV+L  
Sbjct: 49  LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEY 108
Query: 395 WCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQ 454
             +    L +V +YVP G                  +         I  +  YLH   + 
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLH---SL 160
Query: 455 RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKAT 514
            +++RD+KP N+L+D     ++ DFG AK        +T  + GT  YLAPE+  +    
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 515 TSTDVYSYGILMLEVACG 532
            + D ++ G+L+ E+A G
Sbjct: 217 KAVDWWALGVLIYEMAAG 234

>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit (E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24) Isoelectric Variant Ca) And Mn2+ Adenylyl Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c Length = 350

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 84/198 (42%), Gaps = 15/198 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRN---LVQLHG 394
           +G+G FGRV        G   A+K +       +K+    +     L+  N   LV+L  
Sbjct: 49  LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEY 108
Query: 395 WCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQ 454
             +    L +V +YVP G                  +         I  +  YLH   + 
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLH---SL 160
Query: 455 RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKAT 514
            +++RD+KP N+L+D     ++ DFG AK        +T  + GT  YLAPE+  +    
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 515 TSTDVYSYGILMLEVACG 532
            + D ++ G+L+ E+A G
Sbjct: 217 KAVDWWALGVLIYEMAAG 234

>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit Of Camp- Dependent Protein Kinase Reveal Open And Closed Conformations Length = 350

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 84/198 (42%), Gaps = 15/198 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRN---LVQLHG 394
           +G+G FGRV        G   A+K +       +K+    +     L+  N   LV+L  
Sbjct: 49  LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEY 108
Query: 395 WCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQ 454
             +    L +V +YVP G                  +         I  +  YLH   + 
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLH---SL 160
Query: 455 RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKAT 514
            +++RD+KP N+L+D     ++ DFG AK        +T  + GT  YLAPE+  +    
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 515 TSTDVYSYGILMLEVACG 532
            + D ++ G+L+ E+A G
Sbjct: 217 KAVDWWALGVLIYEMAAG 234

>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol Length = 351

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 84/198 (42%), Gaps = 15/198 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRN---LVQLHG 394
           +G+G FGRV        G   A+K +       +K+    +     L+  N   LV+L  
Sbjct: 50  LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 395 WCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQ 454
             +    L +V +YVP G                  +         I  +  YLH   + 
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLH---SL 161
Query: 455 RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKAT 514
            +++RD+KP N+L+D     ++ DFG AK        +T  + GT  YLAPE+  +    
Sbjct: 162 DLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYN 217
Query: 515 TSTDVYSYGILMLEVACG 532
            + D ++ G+L+ E+A G
Sbjct: 218 KAVDWWALGVLIYEMAAG 235

>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With Peptide Substrate And Atp Analog Length = 306

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 49/204 (24%), Positives = 91/204 (44%), Gaps = 15/204 (7%)
Query: 338 VGSGGFGRVYRG-----LMPSLGLEVAIKRIGHNSQQGMK-EFVAEIMSMGRLRHRNLVQ 391
           +G G FG VY G     +       VA+K +  ++    + EF+ E   M      ++V+
Sbjct: 25  LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 392 LHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXX-----TWDQRYKILIGIAQSLL 446
           L G   K    L+V + + +G                      T  +  ++   IA  + 
Sbjct: 85  LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 447 YLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IYEHGANPQTTHIVGTLGYLAP 505
           YL+    ++ VHRD+   N ++      K+GDFG+ + I E     +    +  + ++AP
Sbjct: 145 YLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 201
Query: 506 ELTRTGKATTSTDVYSYGILMLEV 529
           E  + G  TTS+D++S+G+++ E+
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEI 225

>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-1039 Length = 351

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 84/198 (42%), Gaps = 15/198 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRN---LVQLHG 394
           +G+G FGRV        G   A+K +       +K+    +     L+  N   LV+L  
Sbjct: 50  LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 395 WCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQ 454
             +    L +V +YVP G                  +         I  +  YLH   + 
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLH---SL 161
Query: 455 RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKAT 514
            +++RD+KP N+L+D     ++ DFG AK        +T  + GT  YLAPE+  +    
Sbjct: 162 DLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYN 217
Query: 515 TSTDVYSYGILMLEVACG 532
            + D ++ G+L+ E+A G
Sbjct: 218 KAVDWWALGVLIYEMAAG 235

>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex With The Sh2 Domain Of Aps Length = 306

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 49/204 (24%), Positives = 91/204 (44%), Gaps = 15/204 (7%)
Query: 338 VGSGGFGRVYRG-----LMPSLGLEVAIKRIGHNSQQGMK-EFVAEIMSMGRLRHRNLVQ 391
           +G G FG VY G     +       VA+K +  ++    + EF+ E   M      ++V+
Sbjct: 25  LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 392 LHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXX-----TWDQRYKILIGIAQSLL 446
           L G   K    L+V + + +G                      T  +  ++   IA  + 
Sbjct: 85  LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 447 YLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IYEHGANPQTTHIVGTLGYLAP 505
           YL+    ++ VHRD+   N ++      K+GDFG+ + I E     +    +  + ++AP
Sbjct: 145 YLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 201
Query: 506 ELTRTGKATTSTDVYSYGILMLEV 529
           E  + G  TTS+D++S+G+++ E+
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEI 225

>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-670 Length = 351

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 84/198 (42%), Gaps = 15/198 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRN---LVQLHG 394
           +G+G FGRV        G   A+K +       +K+    +     L+  N   LV+L  
Sbjct: 50  LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 395 WCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQ 454
             +    L +V +YVP G                  +         I  +  YLH   + 
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLH---SL 161
Query: 455 RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKAT 514
            +++RD+KP N+L+D     ++ DFG AK        +T  + GT  YLAPE+  +    
Sbjct: 162 DLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYN 217
Query: 515 TSTDVYSYGILMLEVACG 532
            + D ++ G+L+ E+A G
Sbjct: 218 KAVDWWALGVLIYEMAAG 235

>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 90/207 (43%), Gaps = 19/207 (9%)
Query: 335 QNL--VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGM--KEFVAEIMSMGRLRHRN-- 388
           QNL  VGSG +G V        GL VA+K++    Q  +  K    E+  +  ++H N  
Sbjct: 25  QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 84
Query: 389 -LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
            L+ +    R  +E   VY      +                T D    ++  I + L Y
Sbjct: 85  GLLDVFTPARSLEEFNDVYLV----THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
           +H   +  ++HRD+KPSN+ ++     K+ D GLA+      + + T  V T  Y APE+
Sbjct: 141 IH---SADIIHRDLKPSNLAVNEDCELKILDGGLAR----HTDDEMTGYVATRWYRAPEI 193
Query: 508 TRTGKATTST-DVYSYGILMLEVACGR 533
                    T D++S G +M E+  GR
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2 Length = 360

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 56/211 (26%), Positives = 94/211 (44%), Gaps = 15/211 (7%)
Query: 327 SVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGH--NSQQGMKEFVAEIMSMGRL 384
           +V K + +   +GSG  G V       LG+ VA+K++     +Q   K    E++ +  +
Sbjct: 19  TVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCV 78
Query: 385 RHRNLVQLHGWCRKQ---DELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGI 441
            H+N++ L      Q   +E   VY  +                    ++   Y++L GI
Sbjct: 79  NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSY-LLYQMLCGI 137
Query: 442 AQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLG 501
                +LH   +  ++HRD+KPSNI++ +    K+ DFGLA+      N   T  V T  
Sbjct: 138 K----HLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--ASTNFMMTPYVVTRY 188
Query: 502 YLAPELTRTGKATTSTDVYSYGILMLEVACG 532
           Y APE+        + D++S G +M E+  G
Sbjct: 189 YRAPEVILGMGYKENVDIWSVGCIMGELVKG 219

>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2- Yl]amino}phenyl)acetic Acid Length = 303

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 49/204 (24%), Positives = 91/204 (44%), Gaps = 15/204 (7%)
Query: 338 VGSGGFGRVYRG-----LMPSLGLEVAIKRIGHNSQQGMK-EFVAEIMSMGRLRHRNLVQ 391
           +G G FG VY G     +       VA+K +  ++    + EF+ E   M      ++V+
Sbjct: 22  LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 392 LHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXX-----TWDQRYKILIGIAQSLL 446
           L G   K    L+V + + +G                      T  +  ++   IA  + 
Sbjct: 82  LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 141
Query: 447 YLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IYEHGANPQTTHIVGTLGYLAP 505
           YL+    ++ VHRD+   N ++      K+GDFG+ + I E     +    +  + ++AP
Sbjct: 142 YLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 198
Query: 506 ELTRTGKATTSTDVYSYGILMLEV 529
           E  + G  TTS+D++S+G+++ E+
Sbjct: 199 ESLKDGVFTTSSDMWSFGVVLWEI 222

>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796 Length = 364

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 56/211 (26%), Positives = 94/211 (44%), Gaps = 15/211 (7%)
Query: 327 SVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGH--NSQQGMKEFVAEIMSMGRL 384
           +V K + +   +GSG  G V       LG+ VA+K++     +Q   K    E++ +  +
Sbjct: 21  TVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCV 80
Query: 385 RHRNLVQLHGWCRKQ---DELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGI 441
            H+N++ L      Q   +E   VY  +                    ++   Y++L GI
Sbjct: 81  NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSY-LLYQMLCGI 139
Query: 442 AQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLG 501
                +LH   +  ++HRD+KPSNI++ +    K+ DFGLA+      N   T  V T  
Sbjct: 140 K----HLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--ACTNFMMTPYVVTRY 190
Query: 502 YLAPELTRTGKATTSTDVYSYGILMLEVACG 532
           Y APE+        + D++S G +M E+  G
Sbjct: 191 YRAPEVILGMGYAANVDIWSVGCIMGELVKG 221

>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 49/205 (23%), Positives = 92/205 (44%), Gaps = 15/205 (7%)
Query: 338 VGSGGFGRVYRG-----LMPSLGLEVAIKRIGHNSQQGMK-EFVAEIMSMGRLRHRNLVQ 391
           +G G FG VY G     +       VA+K +  ++    + EF+ E   M      ++V+
Sbjct: 25  LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 392 LHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXX-----TWDQRYKILIGIAQSLL 446
           L G   K    L+V + + +G                      T  +  ++   IA  + 
Sbjct: 85  LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 447 YLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IYEHGANPQTTHIVGTLGYLAP 505
           YL+    ++ VHR++   N ++      K+GDFG+ + IYE     +    +  + ++AP
Sbjct: 145 YLNA---KKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 201
Query: 506 ELTRTGKATTSTDVYSYGILMLEVA 530
           E  + G  TTS+D++S+G+++ E+ 
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEIT 226

>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor Length = 307

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 49/205 (23%), Positives = 92/205 (44%), Gaps = 15/205 (7%)
Query: 338 VGSGGFGRVYRG-----LMPSLGLEVAIKRIGHNSQQGMK-EFVAEIMSMGRLRHRNLVQ 391
           +G G FG VY G     +       VA+K +  ++    + EF+ E   M      ++V+
Sbjct: 26  LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 392 LHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXX-----TWDQRYKILIGIAQSLL 446
           L G   K    L+V + + +G                      T  +  ++   IA  + 
Sbjct: 86  LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 145
Query: 447 YLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IYEHGANPQTTHIVGTLGYLAP 505
           YL+    ++ VHR++   N ++      K+GDFG+ + IYE     +    +  + ++AP
Sbjct: 146 YLNA---KKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 202
Query: 506 ELTRTGKATTSTDVYSYGILMLEVA 530
           E  + G  TTS+D++S+G+++ E+ 
Sbjct: 203 ESLKDGVFTTSSDMWSFGVVLWEIT 227

>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein Kina Length = 313

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 56/243 (23%), Positives = 107/243 (44%), Gaps = 17/243 (6%)
Query: 336 NLVGSGGFGRVYRGLMPS---LGLEVAIK--RIGHNSQQGMKEFVAEIMSMGRLRHRNLV 390
            ++G G FG V  G +       L+VA+K  ++ ++SQ+ ++EF++E   M    H N++
Sbjct: 40  KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVI 99
Query: 391 QLHGWCRKQD-----ELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRY-KILIGIAQS 444
           +L G C +       + +++  ++  G                    Q   K ++ IA  
Sbjct: 100 RLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALG 159
Query: 445 LLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLA-KIYEHGANPQTTHIVGTLGYL 503
           + YL    N+  +HRD+   N +L   +   + DFGL+ KIY      Q       + ++
Sbjct: 160 MEYLS---NRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWI 216
Query: 504 APELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQA 563
           A E       T+ +DV+++G+ M E+A   R + P        + D++   H   +    
Sbjct: 217 AIESLADRVYTSKSDVWAFGVTMWEIAT--RGMTPYPGVQNHEMYDYLLHGHRLKQPEDC 274
Query: 564 IDQ 566
           +D+
Sbjct: 275 LDE 277

>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277 Length = 277

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 96/203 (47%), Gaps = 22/203 (10%)
Query: 333 GEQNLVGSGGFGRVYRGLMPSLGLEVAIK----RIGHNSQQGM--KEFVAEIMSMGRLRH 386
           GE+  +GSG F  V +    S GL+ A K    R   +S++G+  ++   E+  +  ++H
Sbjct: 16  GEE--LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQH 73
Query: 387 RNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLL 446
            N++ LH     + +++L+ + V  G                 T ++  + L  I   + 
Sbjct: 74  PNVITLHEVYENKTDVILILELVAGGE-----LFDFLAEKESLTEEEATEFLKQILNGVY 128
Query: 447 YLHEECNQRVVHRDVKPSNI-LLDTYL---NAKLGDFGLAKIYEHGANPQTTHIVGTLGY 502
           YLH   + ++ H D+KP NI LLD  +     K+ DFGLA   + G   +  +I GT  +
Sbjct: 129 YLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN--EFKNIFGTPEF 183
Query: 503 LAPELTRTGKATTSTDVYSYGIL 525
           +APE+          D++S G++
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVI 206

>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The Death Associated Protein Kinase Catalytic Domain With Amppnp Length = 295

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 96/203 (47%), Gaps = 22/203 (10%)
Query: 333 GEQNLVGSGGFGRVYRGLMPSLGLEVAIK----RIGHNSQQGM--KEFVAEIMSMGRLRH 386
           GE+  +GSG F  V +    S GL+ A K    R   +S++G+  ++   E+  +  ++H
Sbjct: 16  GEE--LGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQH 73
Query: 387 RNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLL 446
            N++ LH     + +++L+ + V  G                 T ++  + L  I   + 
Sbjct: 74  PNVITLHEVYENKTDVILILELVAGGE-----LFDFLAEKESLTEEEATEFLKQILNGVY 128
Query: 447 YLHEECNQRVVHRDVKPSNI-LLDTYL---NAKLGDFGLAKIYEHGANPQTTHIVGTLGY 502
           YLH   + ++ H D+KP NI LLD  +     K+ DFGLA   + G   +  +I GT  +
Sbjct: 129 YLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN--EFKNIFGTPEF 183
Query: 503 LAPELTRTGKATTSTDVYSYGIL 525
           +APE+          D++S G++
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVI 206

>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In Complex With Crizotinib Length = 327

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 54/221 (24%), Positives = 95/221 (42%), Gaps = 15/221 (6%)
Query: 338 VGSGGFGRVYRGLMPSLG-----LEVAIKRIGH-NSQQGMKEFVAEIMSMGRLRHRNLVQ 391
           +G G FG VY G +  +      L+VA+K +    S+Q   +F+ E + + +  H+N+V+
Sbjct: 38  LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 392 LHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIG--IAQSLLYLH 449
             G   +     ++ + +  G                 +      + +   IA    YL 
Sbjct: 98  CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 450 EECNQRVVHRDVKPSNILLDTY---LNAKLGDFGLAK-IYEHGANPQTTHIVGTLGYLAP 505
           E      +HRD+   N LL        AK+GDFG+A+ IY      +    +  + ++ P
Sbjct: 158 E---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 214
Query: 506 ELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELL 546
           E    G  T+ TD +S+G+L+ E+        P K+  E+L
Sbjct: 215 EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL 255

>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex With Small Molecular Inhibitors Length = 278

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 96/203 (47%), Gaps = 22/203 (10%)
Query: 333 GEQNLVGSGGFGRVYRGLMPSLGLEVAIK----RIGHNSQQGM--KEFVAEIMSMGRLRH 386
           GE+  +GSG F  V +    S GL+ A K    R   +S++G+  ++   E+  +  ++H
Sbjct: 16  GEE--LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQH 73
Query: 387 RNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLL 446
            N++ LH     + +++L+ + V  G                 T ++  + L  I   + 
Sbjct: 74  PNVITLHEVYENKTDVILILELVAGGE-----LFDFLAEKESLTEEEATEFLKQILNGVY 128
Query: 447 YLHEECNQRVVHRDVKPSNI-LLDTYL---NAKLGDFGLAKIYEHGANPQTTHIVGTLGY 502
           YLH   + ++ H D+KP NI LLD  +     K+ DFGLA   + G   +  +I GT  +
Sbjct: 129 YLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN--EFKNIFGTPEF 183
Query: 503 LAPELTRTGKATTSTDVYSYGIL 525
           +APE+          D++S G++
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVI 206

>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With A Piperidine-Carboxamide Inhibitor Length = 333

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 54/221 (24%), Positives = 95/221 (42%), Gaps = 15/221 (6%)
Query: 338 VGSGGFGRVYRGLMPSLG-----LEVAIKRIGH-NSQQGMKEFVAEIMSMGRLRHRNLVQ 391
           +G G FG VY G +  +      L+VA+K +    S+Q   +F+ E + + +  H+N+V+
Sbjct: 45  LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 392 LHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIG--IAQSLLYLH 449
             G   +     ++ + +  G                 +      + +   IA    YL 
Sbjct: 105 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 164
Query: 450 EECNQRVVHRDVKPSNILLDTY---LNAKLGDFGLAK-IYEHGANPQTTHIVGTLGYLAP 505
           E      +HRD+   N LL        AK+GDFG+A+ IY      +    +  + ++ P
Sbjct: 165 E---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 221
Query: 506 ELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELL 546
           E    G  T+ TD +S+G+L+ E+        P K+  E+L
Sbjct: 222 EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL 262

>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex With Nvp- Tae684 Length = 315

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 54/221 (24%), Positives = 95/221 (42%), Gaps = 15/221 (6%)
Query: 338 VGSGGFGRVYRGLMPSLG-----LEVAIKRIGH-NSQQGMKEFVAEIMSMGRLRHRNLVQ 391
           +G G FG VY G +  +      L+VA+K +    S+Q   +F+ E + + +  H+N+V+
Sbjct: 30  LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 392 LHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIG--IAQSLLYLH 449
             G   +     ++ + +  G                 +      + +   IA    YL 
Sbjct: 90  CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 149
Query: 450 EECNQRVVHRDVKPSNILLDTY---LNAKLGDFGLAK-IYEHGANPQTTHIVGTLGYLAP 505
           E      +HRD+   N LL        AK+GDFG+A+ IY      +    +  + ++ P
Sbjct: 150 E---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 206
Query: 506 ELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELL 546
           E    G  T+ TD +S+G+L+ E+        P K+  E+L
Sbjct: 207 EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL 247

>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Piperidine-Carboxamide Inhibitor 2 Length = 327

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 54/221 (24%), Positives = 95/221 (42%), Gaps = 15/221 (6%)
Query: 338 VGSGGFGRVYRGLMPSLG-----LEVAIKRIGH-NSQQGMKEFVAEIMSMGRLRHRNLVQ 391
           +G G FG VY G +  +      L+VA+K +    S+Q   +F+ E + + +  H+N+V+
Sbjct: 39  LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 392 LHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIG--IAQSLLYLH 449
             G   +     ++ + +  G                 +      + +   IA    YL 
Sbjct: 99  CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 450 EECNQRVVHRDVKPSNILLDTY---LNAKLGDFGLAK-IYEHGANPQTTHIVGTLGYLAP 505
           E      +HRD+   N LL        AK+GDFG+A+ IY      +    +  + ++ P
Sbjct: 159 E---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 215
Query: 506 ELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELL 546
           E    G  T+ TD +S+G+L+ E+        P K+  E+L
Sbjct: 216 EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL 256

>pdb|1VIW|B Chain B, Tenebrio Molitor Alpha-Amylase-Inhibitor Complex Length = 205

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 60/244 (24%), Positives = 98/244 (40%), Gaps = 46/244 (18%)
Query: 6   ADTTSFLYNGFLHANLSLEGAAYISTSGILTVTNKSEGLIGHALYPNPLRFKTSNKSVAI 65
           A  TSF+ + F   NL L+G A +S++G L ++  S   +  A Y  P++ + S      
Sbjct: 1   ATETSFIIDAFNKTNLILQGDATVSSNGNLQLSYNSYDSMSRAFYSAPIQIRDSTTGNVA 60
Query: 66  DFRTNFVFSILPKYPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTKFSTRMLA 125
            F TNF  +I          GL F+++   +PE                  +K  T  + 
Sbjct: 61  SFDTNFTMNIRTHRQANSAVGLDFVLVPV-QPE------------------SKGDT--VT 99
Query: 126 VEFDIIQNTELIDINDNHVGIDXXXXXXXXXXXXXYYSGNNHRIPILLRSGDPIQAWVDY 185
           VEFD   +   ID+N+N +                 Y G N  + I             Y
Sbjct: 100 VEFDTFLSRISIDVNNNDI--------KSVPWDVHDYDGQNAEVRI------------TY 139
Query: 186 SSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLITAS---HNVHG 242
           +S   + +VS+      K     +S  ++L   + +++  GFSA++G    S   H+V  
Sbjct: 140 NSSTKVFSVSLSNPSTGKSNN--VSTTVELEKEVYDWVSVGFSATSGAYQWSYETHDVLS 197
Query: 243 WSIS 246
           WS S
Sbjct: 198 WSFS 201

>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302 Length = 302

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 96/203 (47%), Gaps = 22/203 (10%)
Query: 333 GEQNLVGSGGFGRVYRGLMPSLGLEVAIK----RIGHNSQQGM--KEFVAEIMSMGRLRH 386
           GE+  +GSG F  V +    S GL+ A K    R   +S++G+  ++   E+  +  ++H
Sbjct: 16  GEE--LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQH 73
Query: 387 RNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLL 446
            N++ LH     + +++L+ + V  G                 T ++  + L  I   + 
Sbjct: 74  PNVITLHEVYENKTDVILILELVAGGE-----LFDFLAEKESLTEEEATEFLKQILNGVY 128
Query: 447 YLHEECNQRVVHRDVKPSNI-LLDTYL---NAKLGDFGLAKIYEHGANPQTTHIVGTLGY 502
           YLH   + ++ H D+KP NI LLD  +     K+ DFGLA   + G   +  +I GT  +
Sbjct: 129 YLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN--EFKNIFGTPEF 183
Query: 503 LAPELTRTGKATTSTDVYSYGIL 525
           +APE+          D++S G++
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVI 206

>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.7a Length = 543

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 63/121 (52%), Gaps = 7/121 (5%)
Query: 441 IAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTL 500
           I   L +LH+   + +++RD+KP N+LLD   N ++ D GLA   + G   +T    GT 
Sbjct: 298 IVSGLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT-KTKGYAGTP 353
Query: 501 GYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEI 560
           G++APEL    +   S D ++ G+ + E+   R    P +A  E +    +K+  LE  +
Sbjct: 354 GFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR---GPFRARGEKVENKELKQRVLEQAV 410
Query: 561 T 561
           T
Sbjct: 411 T 411

>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In Complex With A Ruthenium Octasporine Ligand (Osv) Length = 285

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 96/203 (47%), Gaps = 22/203 (10%)
Query: 333 GEQNLVGSGGFGRVYRGLMPSLGLEVAIK----RIGHNSQQGM--KEFVAEIMSMGRLRH 386
           GE+  +GSG F  V +    S GL+ A K    R   +S++G+  ++   E+  +  ++H
Sbjct: 16  GEE--LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQH 73
Query: 387 RNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLL 446
            N++ LH     + +++L+ + V  G                 T ++  + L  I   + 
Sbjct: 74  PNVITLHEVYENKTDVILILELVAGGE-----LFDFLAEKESLTEEEATEFLKQILNGVY 128
Query: 447 YLHEECNQRVVHRDVKPSNI-LLDTYL---NAKLGDFGLAKIYEHGANPQTTHIVGTLGY 502
           YLH   + ++ H D+KP NI LLD  +     K+ DFGLA   + G   +  +I GT  +
Sbjct: 129 YLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN--EFKNIFGTPEF 183
Query: 503 LAPELTRTGKATTSTDVYSYGIL 525
           +APE+          D++S G++
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVI 206

>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor Complex Length = 371

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 84/198 (42%), Gaps = 15/198 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRN---LVQLHG 394
           +G+G FGRV        G   A+K +       +K+    +     L+  N   LV+L  
Sbjct: 70  LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 129
Query: 395 WCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQ 454
             +    L +V +YVP G                  +         I  +  YLH   + 
Sbjct: 130 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLH---SL 181
Query: 455 RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKAT 514
            +++RD+KP N+L+D     ++ DFG AK        +T  + GT  YLAPE+  +    
Sbjct: 182 DLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYN 237
Query: 515 TSTDVYSYGILMLEVACG 532
            + D ++ G+L+ E+A G
Sbjct: 238 KAVDWWALGVLIYEMAAG 255

>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor Kinase Length = 299

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 60/276 (21%), Positives = 115/276 (41%), Gaps = 29/276 (10%)
Query: 338 VGSGGFGRVYRGLMPSL-----GLEVAIKRIGHNSQQGMK-EFVAEIMSMGRLRHRNLVQ 391
           +G G FG VY G+   +        VAIK +   +    + EF+ E   M      ++V+
Sbjct: 18  LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 77
Query: 392 LHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXX-----XXXTWDQRYKILIGIAQSLL 446
           L G   +    L++ + +  G                      +  +  ++   IA  + 
Sbjct: 78  LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 137
Query: 447 YLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IYEHGANPQTTHIVGTLGYLAP 505
           YL+     + VHRD+   N ++      K+GDFG+ + I E     +    +  + +++P
Sbjct: 138 YLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSP 194
Query: 506 ELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAID 565
           E  + G  TT +DV+S+G+++ E+A    + +P +  +   ++ +V    +EG +    D
Sbjct: 195 ESLKDGVFTTYSDVWSFGVVLWEIAT--LAEQPYQGLSNEQVLRFV----MEGGLLDKPD 248
Query: 566 QTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVV 601
              D        ++L L   C   NP  RP    ++
Sbjct: 249 NCPD--------MLLELMRMCWQYNPKMRPSFLEII 276

>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution Length = 543

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 63/121 (52%), Gaps = 7/121 (5%)
Query: 441 IAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTL 500
           I   L +LH+   + +++RD+KP N+LLD   N ++ D GLA   + G   +T    GT 
Sbjct: 298 IVSGLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT-KTKGYAGTP 353
Query: 501 GYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEI 560
           G++APEL    +   S D ++ G+ + E+   R    P +A  E +    +K+  LE  +
Sbjct: 354 GFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR---GPFRARGEKVENKELKQRVLEQAV 410
Query: 561 T 561
           T
Sbjct: 411 T 411

>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d) Length = 290

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 39/111 (35%), Positives = 59/111 (53%), Gaps = 26/111 (23%)
Query: 436 KILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGL--------AKIYEH 487
           KI + I ++L +LH + +  V+HRDVKPSN+L++     K+ DFG+        AK  + 
Sbjct: 113 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDA 170
Query: 488 GANPQTTHIVGTLGYLA-----PELTRTGKATTSTDVYSYGILMLEVACGR 533
           G  P          Y+A     PEL + G +  S D++S GI M+E+A  R
Sbjct: 171 GCKP----------YMAPERINPELNQKGYSVKS-DIWSLGITMIELAILR 210

>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 54/221 (24%), Positives = 95/221 (42%), Gaps = 15/221 (6%)
Query: 338 VGSGGFGRVYRGLMPSLG-----LEVAIKRIGH-NSQQGMKEFVAEIMSMGRLRHRNLVQ 391
           +G G FG VY G +  +      L+VA+K +    S+Q   +F+ E + + +  H+N+V+
Sbjct: 53  LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 392 LHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIG--IAQSLLYLH 449
             G   +     ++ + +  G                 +      + +   IA    YL 
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 450 EECNQRVVHRDVKPSNILLDTY---LNAKLGDFGLAK-IYEHGANPQTTHIVGTLGYLAP 505
           E      +HRD+   N LL        AK+GDFG+A+ IY      +    +  + ++ P
Sbjct: 173 E---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 506 ELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELL 546
           E    G  T+ TD +S+G+L+ E+        P K+  E+L
Sbjct: 230 EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL 270

>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In Complex With Crizotinib (Pf-02341066) Length = 327

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 54/221 (24%), Positives = 95/221 (42%), Gaps = 15/221 (6%)
Query: 338 VGSGGFGRVYRGLMPSLG-----LEVAIKRIGH-NSQQGMKEFVAEIMSMGRLRHRNLVQ 391
           +G G FG VY G +  +      L+VA+K +    S+Q   +F+ E + + +  H+N+V+
Sbjct: 38  LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 392 LHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIG--IAQSLLYLH 449
             G   +     ++ + +  G                 +      + +   IA    YL 
Sbjct: 98  CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 450 EECNQRVVHRDVKPSNILLDTY---LNAKLGDFGLAK-IYEHGANPQTTHIVGTLGYLAP 505
           E      +HRD+   N LL        AK+GDFG+A+ IY      +    +  + ++ P
Sbjct: 158 E---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 214
Query: 506 ELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELL 546
           E    G  T+ TD +S+G+L+ E+        P K+  E+L
Sbjct: 215 EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL 255

>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex Length = 334

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 96/203 (47%), Gaps = 22/203 (10%)
Query: 333 GEQNLVGSGGFGRVYRGLMPSLGLEVAIK----RIGHNSQQGM--KEFVAEIMSMGRLRH 386
           GE+  +GSG F  V +    S GL+ A K    R   +S++G+  ++   E+  +  ++H
Sbjct: 16  GEE--LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQH 73
Query: 387 RNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLL 446
            N++ LH     + +++L+ + V  G                 T ++  + L  I   + 
Sbjct: 74  PNVITLHEVYENKTDVILILELVAGGE-----LFDFLAEKESLTEEEATEFLKQILNGVY 128
Query: 447 YLHEECNQRVVHRDVKPSNI-LLDTYL---NAKLGDFGLAKIYEHGANPQTTHIVGTLGY 502
           YLH   + ++ H D+KP NI LLD  +     K+ DFGLA   + G   +  +I GT  +
Sbjct: 129 YLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN--EFKNIFGTPEF 183
Query: 503 LAPELTRTGKATTSTDVYSYGIL 525
           +APE+          D++S G++
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVI 206

>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase In Complex With Amppnp And Mg2+ Length = 295

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 96/203 (47%), Gaps = 22/203 (10%)
Query: 333 GEQNLVGSGGFGRVYRGLMPSLGLEVAIK----RIGHNSQQGM--KEFVAEIMSMGRLRH 386
           GE+  +GSG F  V +    S GL+ A K    R   +S++G+  ++   E+  +  ++H
Sbjct: 16  GEE--LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQH 73
Query: 387 RNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLL 446
            N++ LH     + +++L+ + V  G                 T ++  + L  I   + 
Sbjct: 74  PNVITLHEVYENKTDVILILELVAGGE-----LFDFLAEKESLTEEEATEFLKQILNGVY 128
Query: 447 YLHEECNQRVVHRDVKPSNI-LLDTYL---NAKLGDFGLAKIYEHGANPQTTHIVGTLGY 502
           YLH   + ++ H D+KP NI LLD  +     K+ DFGLA   + G   +  +I GT  +
Sbjct: 129 YLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN--EFKNIFGTPEF 183
Query: 503 LAPELTRTGKATTSTDVYSYGIL 525
           +APE+          D++S G++
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVI 206

>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.9a Length = 543

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 63/121 (52%), Gaps = 7/121 (5%)
Query: 441 IAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTL 500
           I   L +LH+   + +++RD+KP N+LLD   N ++ D GLA   + G   +T    GT 
Sbjct: 298 IVSGLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT-KTKGYAGTP 353
Query: 501 GYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEI 560
           G++APEL    +   S D ++ G+ + E+   R    P +A  E +    +K+  LE  +
Sbjct: 354 GFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR---GPFRARGEKVENKELKQRVLEQAV 410
Query: 561 T 561
           T
Sbjct: 411 T 411

>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With Bound Inhibitor Fragment Length = 293

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 93/198 (46%), Gaps = 20/198 (10%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIK----RIGHNSQQGM--KEFVAEIMSMGRLRHRNLVQ 391
           +GSG F  V +    S GL+ A K    R   +S++G+  ++   E+  +  ++H N++ 
Sbjct: 18  LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77
Query: 392 LHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEE 451
           LH     + +++L+ + V  G                 T ++  + L  I   + YLH  
Sbjct: 78  LHEVYENKTDVILILELVAGGE-----LFDFLAEKESLTEEEATEFLKQILNGVYYLH-- 130
Query: 452 CNQRVVHRDVKPSNI-LLDTYL---NAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
            + ++ H D+KP NI LLD  +     K+ DFGLA   + G   +  +I GT  ++APE+
Sbjct: 131 -SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN--EFKNIFGTPEFVAPEI 187
Query: 508 TRTGKATTSTDVYSYGIL 525
                     D++S G++
Sbjct: 188 VNYEPLGLEADMWSIGVI 205

>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Ch5424802 Length = 344

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 54/221 (24%), Positives = 95/221 (42%), Gaps = 15/221 (6%)
Query: 338 VGSGGFGRVYRGLMPSLG-----LEVAIKRIGH-NSQQGMKEFVAEIMSMGRLRHRNLVQ 391
           +G G FG VY G +  +      L+VA+K +    S+Q   +F+ E + + +  H+N+V+
Sbjct: 55  LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 392 LHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIG--IAQSLLYLH 449
             G   +     ++ + +  G                 +      + +   IA    YL 
Sbjct: 115 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 174
Query: 450 EECNQRVVHRDVKPSNILLDTY---LNAKLGDFGLAK-IYEHGANPQTTHIVGTLGYLAP 505
           E      +HRD+   N LL        AK+GDFG+A+ IY      +    +  + ++ P
Sbjct: 175 E---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 231
Query: 506 ELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELL 546
           E    G  T+ TD +S+G+L+ E+        P K+  E+L
Sbjct: 232 EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL 272

>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C DOUBLE MUTANT Complexed With Adp And Mg Length = 543

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 63/121 (52%), Gaps = 7/121 (5%)
Query: 441 IAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTL 500
           I   L +LH+   + +++RD+KP N+LLD   N ++ D GLA   + G   +T    GT 
Sbjct: 298 IVSGLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT-KTKGYAGTP 353
Query: 501 GYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEI 560
           G++APEL    +   S D ++ G+ + E+   R    P +A  E +    +K+  LE  +
Sbjct: 354 GFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR---GPFRARGEKVENKELKQRVLEQAV 410
Query: 561 T 561
           T
Sbjct: 411 T 411

>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 54/221 (24%), Positives = 95/221 (42%), Gaps = 15/221 (6%)
Query: 338 VGSGGFGRVYRGLMPSLG-----LEVAIKRIGH-NSQQGMKEFVAEIMSMGRLRHRNLVQ 391
           +G G FG VY G +  +      L+VA+K +    S+Q   +F+ E + + +  H+N+V+
Sbjct: 53  LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 392 LHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIG--IAQSLLYLH 449
             G   +     ++ + +  G                 +      + +   IA    YL 
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 450 EECNQRVVHRDVKPSNILLDTY---LNAKLGDFGLAK-IYEHGANPQTTHIVGTLGYLAP 505
           E      +HRD+   N LL        AK+GDFG+A+ IY      +    +  + ++ P
Sbjct: 173 E---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 506 ELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELL 546
           E    G  T+ TD +S+G+L+ E+        P K+  E+L
Sbjct: 230 EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL 270

>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered N- Terminal Helix Length = 350

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 84/198 (42%), Gaps = 15/198 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRN---LVQLHG 394
           +G+G FGRV        G   A+K +       +KE    +     L+  N   LV+L  
Sbjct: 49  LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 395 WCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQ 454
             +    L +V +Y P G                  +         I  +  YLH   + 
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLH---SL 160
Query: 455 RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKAT 514
            +++RD+KP N+++D     ++ DFGLAK        +T  + GT  YLAPE+  +    
Sbjct: 161 DLIYRDLKPENLMIDQQGYIQVTDFGLAK----RVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 515 TSTDVYSYGILMLEVACG 532
            + D ++ G+L+ E+A G
Sbjct: 217 KAVDWWALGVLIYEMAAG 234

>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor Length = 398

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 94/212 (44%), Gaps = 16/212 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRI--GHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGW 395
           +G+G +G V        G +VAIK+I    +     K  + E+  +   +H N++ +   
Sbjct: 62  IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDI 121
Query: 396 CRKQ---DELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEEC 452
            R      E   VY  +                    T +     L  + + L Y+H   
Sbjct: 122 LRPTVPYGEFKSVYVVL---DLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMH--- 175
Query: 453 NQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IYEHGANPQ--TTHIVGTLGYLAPELTR 509
           + +V+HRD+KPSN+L++     K+GDFG+A+ +    A  Q   T  V T  Y APEL  
Sbjct: 176 SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELML 235
Query: 510 T-GKATTSTDVYSYGILMLEVACGRRSIEPQK 540
           +  + T + D++S G +  E+   RR + P K
Sbjct: 236 SLHEYTQAIDLWSVGCIFGEM-LARRQLFPGK 266

>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase Length = 380

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 89/207 (42%), Gaps = 19/207 (9%)
Query: 335 QNL--VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGM--KEFVAEIMSMGRLRHRN-- 388
           QNL  VGSG +G V        G  VA+K++    Q  +  K    E+  +  ++H N  
Sbjct: 45  QNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 104
Query: 389 -LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
            L+ +    R  +E   VY      +                T D    ++  I + L Y
Sbjct: 105 GLLDVFTPARSLEEFNDVYLV----THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 160
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
           +H   +  ++HRD+KPSN+ ++     K+ DFGLA+      + +    V T  Y APE+
Sbjct: 161 IH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMXGXVATRWYRAPEI 213
Query: 508 TRTGKATTST-DVYSYGILMLEVACGR 533
                    T D++S G +M E+  GR
Sbjct: 214 MLNWMHYNQTVDIWSVGCIMAELLTGR 240

>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic Domain Of Death-Associated Protein Kinase With Atp Analogue And Mn. Length = 294

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 93/198 (46%), Gaps = 20/198 (10%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIK----RIGHNSQQGM--KEFVAEIMSMGRLRHRNLVQ 391
           +GSG F  V +    S GL+ A K    R   +S++G+  ++   E+  +  ++H N++ 
Sbjct: 18  LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77
Query: 392 LHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEE 451
           LH     + +++L+ + V  G                 T ++  + L  I   + YLH  
Sbjct: 78  LHEVYENKTDVILILELVAGGE-----LFDFLAEKESLTEEEATEFLKQILNGVYYLH-- 130
Query: 452 CNQRVVHRDVKPSNI-LLDTYL---NAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
            + ++ H D+KP NI LLD  +     K+ DFGLA   + G   +  +I GT  ++APE+
Sbjct: 131 -SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN--EFKNIFGTPEFVAPEI 187
Query: 508 TRTGKATTSTDVYSYGIL 525
                     D++S G++
Sbjct: 188 VNYEPLGLEADMWSIGVI 205

>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With Azepane Derivative 8 Length = 350

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 84/198 (42%), Gaps = 15/198 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRN---LVQLHG 394
           +G+G FGRV        G   A+K +       +K+    +     L+  N   LV+L  
Sbjct: 49  LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 395 WCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQ 454
             +    L +V +YVP G                  +         I  +  YLH   + 
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLH---SL 160
Query: 455 RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKAT 514
            +++RD+KP N+L+D     ++ DFG AK        +T  + GT  YLAPE+  +    
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 515 TSTDVYSYGILMLEVACG 532
            + D ++ G+L+ E+A G
Sbjct: 217 KAVDWWALGVLIYEMAAG 234

>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312 Length = 312

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 96/203 (47%), Gaps = 22/203 (10%)
Query: 333 GEQNLVGSGGFGRVYRGLMPSLGLEVAIK----RIGHNSQQGM--KEFVAEIMSMGRLRH 386
           GE+  +GSG F  V +    S GL+ A K    R   +S++G+  ++   E+  +  ++H
Sbjct: 16  GEE--LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQH 73
Query: 387 RNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLL 446
            N++ LH     + +++L+ + V  G                 T ++  + L  I   + 
Sbjct: 74  PNVITLHEVYENKTDVILILELVAGGE-----LFDFLAEKESLTEEEATEFLKQILNGVY 128
Query: 447 YLHEECNQRVVHRDVKPSNI-LLDTYL---NAKLGDFGLAKIYEHGANPQTTHIVGTLGY 502
           YLH   + ++ H D+KP NI LLD  +     K+ DFGLA   + G   +  +I GT  +
Sbjct: 129 YLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN--EFKNIFGTPEF 183
Query: 503 LAPELTRTGKATTSTDVYSYGIL 525
           +APE+          D++S G++
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVI 206

>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)amide Length = 351

Iteration: 1
 Score = 56.6 bits (135), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 84/198 (42%), Gaps = 15/198 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRN---LVQLHG 394
           +G+G FGRV        G   A+K +       +K+    +     L+  N   LV+L  
Sbjct: 50  LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 395 WCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQ 454
             +    L +V +YVP G                  +         I  +  YLH   + 
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLH---SL 161
Query: 455 RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKAT 514
            +++RD+KP N+L+D     ++ DFG AK        +T  + GT  YLAPE+  +    
Sbjct: 162 DLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYN 217
Query: 515 TSTDVYSYGILMLEVACG 532
            + D ++ G+L+ E+A G
Sbjct: 218 KAVDWWALGVLIYEMAAG 235

>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score = 56.6 bits (135), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 54/221 (24%), Positives = 95/221 (42%), Gaps = 15/221 (6%)
Query: 338 VGSGGFGRVYRGLMPSLG-----LEVAIKRIGH-NSQQGMKEFVAEIMSMGRLRHRNLVQ 391
           +G G FG VY G +  +      L+VA+K +    S+Q   +F+ E + + +  H+N+V+
Sbjct: 39  LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 392 LHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIG--IAQSLLYLH 449
             G   +     ++ + +  G                 +      + +   IA    YL 
Sbjct: 99  CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 450 EECNQRVVHRDVKPSNILLDTY---LNAKLGDFGLAK-IYEHGANPQTTHIVGTLGYLAP 505
           E      +HRD+   N LL        AK+GDFG+A+ IY      +    +  + ++ P
Sbjct: 159 E---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPP 215
Query: 506 ELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELL 546
           E    G  T+ TD +S+G+L+ E+        P K+  E+L
Sbjct: 216 EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL 256

>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With Pki-5-24 Length = 350

Iteration: 1
 Score = 56.6 bits (135), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 84/198 (42%), Gaps = 15/198 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRN---LVQLHG 394
           +G+G FGRV        G   A+K +       +K+    +     L+  N   LV+L  
Sbjct: 49  LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 395 WCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQ 454
             +    L +V +YVP G                  +         I  +  YLH   + 
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLH---SL 160
Query: 455 RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKAT 514
            +++RD+KP N+L+D     ++ DFG AK        +T  + GT  YLAPE+  +    
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 515 TSTDVYSYGILMLEVACG 532
            + D ++ G+L+ E+A G
Sbjct: 217 KAVDWWALGVLIYEMAAG 234

>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue Length = 348

Iteration: 1
 Score = 56.6 bits (135), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 59/265 (22%), Positives = 104/265 (39%), Gaps = 44/265 (16%)
Query: 281 LAGMAFLILIIAGAIHVLQRIKYADKMLEDWEIQCGARRFKYAELASVTKGFG------- 333
           L  M  ++   +  I++ + +K  DK + D+ I     + K+ ++    K          
Sbjct: 3   LGSMKDILSNYSNLIYLNKYVKEKDKYINDYRIIRTLNQGKFNKIILCEKDNKFYALKKY 62
Query: 334 EQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLH 393
           E++L+         R    S   +++IK           +F  E+  +  +++   +   
Sbjct: 63  EKSLLEKK------RDFTKSNNDKISIK-------SKYDDFKNELQIITDIKNEYCLTCE 109
Query: 394 GWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIA----------Q 443
           G     DE+ ++Y+Y+ N S                  D+ Y   I I            
Sbjct: 110 GIITNYDEVYIIYEYMENDSILKFDEYFF-------VLDKNYTCFIPIQVIKCIIKSVLN 162
Query: 444 SLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYL 503
           S  Y+H E N  + HRDVKPSNIL+D     KL DFG +   E+  + +     GT  ++
Sbjct: 163 SFSYIHNEKN--ICHRDVKPSNILMDKNGRVKLSDFGES---EYMVDKKIKGSRGTYEFM 217
Query: 504 APEL--TRTGKATTSTDVYSYGILM 526
            PE     +       D++S GI +
Sbjct: 218 PPEFFSNESSYNGAKVDIWSLGICL 242

>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1 In With Amp-Pnp Length = 325

Iteration: 1
 Score = 56.6 bits (135), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 58/242 (23%), Positives = 101/242 (41%), Gaps = 28/242 (11%)
Query: 338 VGSGGFG----RVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLH 393
           +G G F      V++    +  +++  KR+  N+Q   KE  A  +  G   H N+V+LH
Sbjct: 19  LGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQ---KEITALKLCEG---HPNIVKLH 72
Query: 394 GWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECN 453
                Q    LV + +  G                 ++     I+  +  ++ ++H+   
Sbjct: 73  EVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASY-----IMRKLVSAVSHMHD--- 124
Query: 454 QRVVHRDVKPSNILL---DTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRT 510
             VVHRD+KP N+L    +  L  K+ DFG A++      P  T    TL Y APEL   
Sbjct: 125 VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCF-TLHYAAPELLNQ 183
Query: 511 GKATTSTDVYSYGILMLEVACGRRSIEPQK------AAAELLLVDWVKELHLEGEITQAI 564
                S D++S G+++  +  G+   +         +A E++      +   EGE  + +
Sbjct: 184 NGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNV 243
Query: 565 DQ 566
            Q
Sbjct: 244 SQ 245

>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With Staurosporine Length = 350

Iteration: 1
 Score = 56.2 bits (134), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 84/198 (42%), Gaps = 15/198 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRN---LVQLHG 394
           +G+G FGRV        G   A+K +       +K+    +     L+  N   LV+L  
Sbjct: 49  LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 395 WCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQ 454
             +    L +V +YVP G                  +         I  +  YLH   + 
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLH---SL 160
Query: 455 RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKAT 514
            +++RD+KP N+L+D     ++ DFG AK        +T  + GT  YLAPE+  +    
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 515 TSTDVYSYGILMLEVACG 532
            + D ++ G+L+ E+A G
Sbjct: 217 KAVDWWALGVLIYEMAAG 234

>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In Complex With Sto-609 Length = 298

Iteration: 1
 Score = 56.2 bits (134), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 83/161 (51%), Gaps = 15/161 (9%)
Query: 371 MKEFVAEIMSMGRLRHRNLVQLHGWCR--KQDELLLVYDYVPNGSXXXXXXXXXXXXXXX 428
           +++   EI  + +L H N+V+L        +D L +V++ V  G                
Sbjct: 80  IEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPL----- 134
Query: 429 XTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHG 488
            + DQ       + + + YLH    Q+++HRD+KPSN+L+    + K+ DFG++  ++ G
Sbjct: 135 -SEDQARFYFQDLIKGIEYLH---YQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFK-G 189
Query: 489 ANPQTTHIVGTLGYLAPE-LTRTGK--ATTSTDVYSYGILM 526
           ++   ++ VGT  ++APE L+ T K  +  + DV++ G+ +
Sbjct: 190 SDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTL 230

>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain Length = 332

Iteration: 1
 Score = 56.2 bits (134), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 54/104 (51%), Gaps = 14/104 (13%)
Query: 437 ILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQT--- 493
           I I IA+++ +LH   ++ ++HRD+KPSNI        K+GDFGL    +     QT   
Sbjct: 169 IFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLT 225
Query: 494 ------THI--VGTLGYLAPELTRTGKATTSTDVYSYGILMLEV 529
                 TH   VGT  Y++PE       +   D++S G+++ E+
Sbjct: 226 PMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFEL 269

>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha Length = 389

Iteration: 1
 Score = 56.2 bits (134), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 53/199 (26%), Positives = 86/199 (43%), Gaps = 11/199 (5%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQ--GMKEFVAEIMSMGRLRHRNLVQLHGW 395
           VGSG +G V        GL++A+K++    Q     K    E+  +  ++H N++ L   
Sbjct: 59  VGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 118
Query: 396 CRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQR 455
                 L    D V   +                T D    ++  I + L Y+H   +  
Sbjct: 119 FTPATSLEEFND-VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SAD 174
Query: 456 VVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATT 515
           ++HRD+KPSN+ ++     K+ DFGLA+      + + T  V T  Y APE+        
Sbjct: 175 IIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYN 230
Query: 516 ST-DVYSYGILMLEVACGR 533
            T D++S G +M E+  GR
Sbjct: 231 MTVDIWSVGCIMAELLTGR 249

>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors Length = 336

Iteration: 1
 Score = 56.2 bits (134), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 84/198 (42%), Gaps = 15/198 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRN---LVQLHG 394
           +G+G FGRV        G   A+K +       +K+    +     L+  N   LV+L  
Sbjct: 35  LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 94
Query: 395 WCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQ 454
             +    L +V +YVP G                  +         I  +  YLH   + 
Sbjct: 95  SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLH---SL 146
Query: 455 RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKAT 514
            +++RD+KP N+L+D     ++ DFG AK        +T  + GT  YLAPE+  +    
Sbjct: 147 DLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWTLCGTPEYLAPEIILSKGYN 202
Query: 515 TSTDVYSYGILMLEVACG 532
            + D ++ G+L+ E+A G
Sbjct: 203 KAVDWWALGVLIYEMAAG 220

>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304 Length = 326

Iteration: 1
 Score = 56.2 bits (134), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 93/198 (46%), Gaps = 20/198 (10%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIK----RIGHNSQQGM--KEFVAEIMSMGRLRHRNLVQ 391
           +GSG F  V +    S GL+ A K    R   +S++G+  ++   E+  +  ++H N++ 
Sbjct: 19  LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 392 LHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEE 451
           LH     + +++L+ + V  G                 T ++  + L  I   + YLH  
Sbjct: 79  LHEVYENKTDVILILELVAGGE-----LFDFLAEKESLTEEEATEFLKQILNGVYYLH-- 131
Query: 452 CNQRVVHRDVKPSNI-LLDTYL---NAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
            + ++ H D+KP NI LLD  +     K+ DFGLA   + G   +  +I GT  ++APE+
Sbjct: 132 -SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN--EFKNIFGTPEFVAPEI 188
Query: 508 TRTGKATTSTDVYSYGIL 525
                     D++S G++
Sbjct: 189 VNYEPLGLEADMWSIGVI 206

>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With A- 443654 Length = 351

Iteration: 1
 Score = 56.2 bits (134), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 85/198 (42%), Gaps = 15/198 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRN---LVQLHG 394
           +G+G FGRV        G   A+K +       +K+    +     L+  N   LV+L  
Sbjct: 50  LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 395 WCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQ 454
             +    L +V +YVP G                  +         I  +  YLH   + 
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-----YAAQIVLTFEYLH---SL 161
Query: 455 RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKAT 514
            +++RD+KP N+L+D     ++ DFG AK        +T  + GT  YLAPE+  +    
Sbjct: 162 DLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYN 217
Query: 515 TSTDVYSYGILMLEVACG 532
            + D ++ G+L+ E+A G
Sbjct: 218 KAVDWWALGVLIYEMAAG 235

>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077) Length = 350

Iteration: 1
 Score = 56.2 bits (134), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 85/198 (42%), Gaps = 15/198 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRN---LVQLHG 394
           +G+G FGRV        G   A+K +       +K+    +     L+  N   LV+L  
Sbjct: 49  LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 395 WCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQ 454
             +    L +V +YVP G                  +         I  +  YLH   + 
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-----YAAQIVLTFEYLH---SL 160
Query: 455 RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKAT 514
            +++RD+KP N+L+D     ++ DFG AK        +T  + GT  YLAPE+  +    
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 515 TSTDVYSYGILMLEVACG 532
            + D ++ G+L+ E+A G
Sbjct: 217 KAVDWWALGVLIYEMAAG 234

>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m, Q181k) With Compound 18 Length = 351

Iteration: 1
 Score = 56.2 bits (134), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 50/198 (25%), Positives = 83/198 (41%), Gaps = 15/198 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRN---LVQLHG 394
           +G+G FGRV        G   A+K +       +K+    +     L+  N   LV+L  
Sbjct: 50  LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 395 WCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQ 454
             +    L +V +Y P G                  +         I  +  YLH   + 
Sbjct: 110 SFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLH---SL 161
Query: 455 RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKAT 514
            +++RD+KP N+++D     K+ DFG AK        +T  + GT  YLAPE+  +    
Sbjct: 162 DLIYRDLKPENLMIDQQGYIKVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYN 217
Query: 515 TSTDVYSYGILMLEVACG 532
            + D ++ G+L+ E+A G
Sbjct: 218 KAVDWWALGVLIYEMAAG 235

>pdb|2SBA|A Chain A, Soybean Agglutinin Complexed With 2,6-Pentasaccharide Length = 253

Iteration: 1
 Score = 56.2 bits (134), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 109/251 (43%), Gaps = 32/251 (12%)
Query: 6   ADTTSFLYNGFL--HANLSLEGAAYISTSGILTVTNKSE------GLIGHALYPNPLRFK 57
           A+T SF +N F+    N+ L+G A +++SG L +    E        +G ALY  P+   
Sbjct: 1   AETVSFSWNKFVPKQPNMILQGDAIVTSSGKLQLNKVDENGTPKPSSLGRALYSTPIHIW 60
Query: 58  TSNKSVAIDFRTNFVFSILPKYPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSST 117
                    F  +F F+           GLAF +   +      A  +LGL N   S   
Sbjct: 61  DKETGSVASFAASFNFTFYAPDTKRLADGLAFFLAPIDTKPQTHAG-YLGLFNENESGD- 118
Query: 118 KFSTRMLAVEFDIIQNTELIDINDNHVGIDXXXXXXXXXXXXXYYSGNNHRIPILLRSGD 177
               +++AVEFD  +N+   D  + H+GI+              +   N+++  +L + D
Sbjct: 119 ----QVVAVEFDTFRNS--WDPPNPHIGINVNSIRSIKTTS---WDLANNKVAKVLITYD 169
Query: 178 PIQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLITA- 236
                   +S  +L+   + P    +    ++S  +DL + + E++  GFSA+TGL    
Sbjct: 170 --------ASTSLLVASLVYP---SQRTSNILSDVVDLKTSLPEWVRIGFSAATGLDIPG 218
Query: 237 -SHNVHGWSIS 246
            SH+V  WS +
Sbjct: 219 ESHDVLSWSFA 229

>pdb|1QNW|A Chain A, Lectin Ii From Ulex Europaeus Length = 242

Iteration: 1
 Score = 56.2 bits (134), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 67/250 (26%), Positives = 109/250 (43%), Gaps = 32/250 (12%)
Query: 6   ADTTSFLYNGFL--HANLSLEGAAYISTSGILTVTNKSEGL---IGHALYPNPLRFKTSN 60
           +D  SF ++ F+    N+  +G A +ST+G+L VT  S+     IG ALY  P++   S 
Sbjct: 3   SDDLSFNFDKFVPNQKNIIFQGDASVSTTGVLQVTKVSKPTTTSIGRALYAAPIQIWDSI 62
Query: 61  KSVAIDFRTNFVFSILPKYPDLGGQGLAFIIISTNR--PENCLANQFLGLPNITMSSSTK 118
                 F T+F F +     D G  GLAF +   N   P    A  F     +  SS +K
Sbjct: 63  TGKVASFATSFSFVVKADKSD-GVDGLAFFLAPANSQIPSGSSAGMF----GLFSSSDSK 117
Query: 119 FSTRMLAVEFDII--QNTELIDINDNHVGIDXXXXXXXXXXXXXYYSGNNHRIPILLRSG 176
            S +++AVEFD    +     D +  H+GID             + +G    + I  R+ 
Sbjct: 118 SSNQIIAVEFDTYFGKAYNPWDPDFKHIGIDVNSIKSIKTVKWDWRNGEVADVVITYRA- 176
Query: 177 DPIQAWVDYSSQEMLINVSICPLGVPKP-YRPLISLPIDLSSVIDEYMYTGFSASTGLIT 235
            P ++            +++C L  P      +I+  +DL +++ E++  GFS   G   
Sbjct: 177 -PTKS------------LTVC-LSYPSDGTSNIITASVDLKAILPEWVSVGFSGGVGNAA 222
Query: 236 --ASHNVHGW 243
              +H+V  W
Sbjct: 223 EFETHDVLSW 232

>pdb|2F7E|E Chain E, Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6- Yl-Pyridin-3-Yloxymethyl-Etylamine Length = 351

Iteration: 1
 Score = 56.2 bits (134), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 84/198 (42%), Gaps = 15/198 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRN---LVQLHG 394
           +G+G FGRV        G   A+K +       +K+    +     L+  N   LV+L  
Sbjct: 50  LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 395 WCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQ 454
             +    L +V +YVP G                  +         I  +  YLH   + 
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLH---SL 161
Query: 455 RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKAT 514
            +++RD+KP N+L+D     ++ DFG AK        +T  + GT  YLAPE+  +    
Sbjct: 162 DLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWTLCGTPEYLAPEIILSKGYN 217
Query: 515 TSTDVYSYGILMLEVACG 532
            + D ++ G+L+ E+A G
Sbjct: 218 KAVDWWALGVLIYEMAAG 235

>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp Length = 295

Iteration: 1
 Score = 56.2 bits (134), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 96/203 (47%), Gaps = 22/203 (10%)
Query: 333 GEQNLVGSGGFGRVYRGLMPSLGLEVAIK----RIGHNSQQGM--KEFVAEIMSMGRLRH 386
           GE+  +GSG F  V +    S GL+ A K    R   +S++G+  ++   E+  +  ++H
Sbjct: 16  GEE--LGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQH 73
Query: 387 RNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLL 446
            N++ LH     + +++L+ + V  G                 T ++  + L  I   + 
Sbjct: 74  PNVITLHEVYENKTDVILILELVAGGE-----LFDFLAEKESLTEEEATEFLKQILNGVY 128
Query: 447 YLHEECNQRVVHRDVKPSNI-LLDTYL---NAKLGDFGLAKIYEHGANPQTTHIVGTLGY 502
           YLH   + ++ H D+KP NI LLD  +     K+ DFGLA   + G   +  +I GT  +
Sbjct: 129 YLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN--EFKNIFGTPEF 183
Query: 503 LAPELTRTGKATTSTDVYSYGIL 525
           +APE+          D++S G++
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVI 206

>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex With An Mkk5 Binding Fragment Length = 442

Iteration: 1
 Score = 56.2 bits (134), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 94/212 (44%), Gaps = 16/212 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRI--GHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGW 395
           +G+G +G V        G +VAIK+I    +     K  + E+  +   +H N++ +   
Sbjct: 63  IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDI 122
Query: 396 CRKQ---DELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEEC 452
            R      E   VY  +                    T +     L  + + L Y+H   
Sbjct: 123 LRPTVPYGEFKSVYVVL---DLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMH--- 176
Query: 453 NQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IYEHGANPQ--TTHIVGTLGYLAPELTR 509
           + +V+HRD+KPSN+L++     K+GDFG+A+ +    A  Q   T  V T  Y APEL  
Sbjct: 177 SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELML 236
Query: 510 T-GKATTSTDVYSYGILMLEVACGRRSIEPQK 540
           +  + T + D++S G +  E+   RR + P K
Sbjct: 237 SLHEYTQAIDLWSVGCIFGEM-LARRQLFPGK 267

>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 56.2 bits (134), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 85/198 (42%), Gaps = 15/198 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRN---LVQLHG 394
           +G+G FGRV        G   A+K +       +K+    +     L+  N   LV+L  
Sbjct: 49  LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 395 WCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQ 454
             +    L +V +YVP G                  +         I  +  YLH   + 
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-----YAAQIVLTFEYLH---SL 160
Query: 455 RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKAT 514
            +++RD+KP N+L+D     ++ DFG AK        +T  + GT  YLAPE+  +    
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 515 TSTDVYSYGILMLEVACG 532
            + D ++ G+L+ E+A G
Sbjct: 217 KAVDWWALGVLIYEMAAG 234

>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Acyliminobenzimidazole Inhibitor 1 Length = 353

Iteration: 1
 Score = 56.2 bits (134), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 54/221 (24%), Positives = 95/221 (42%), Gaps = 15/221 (6%)
Query: 338 VGSGGFGRVYRGLMPSLG-----LEVAIKRIGH-NSQQGMKEFVAEIMSMGRLRHRNLVQ 391
           +G G FG VY G +  +      L+VA+K +    S+Q   +F+ E + + +  H+N+V+
Sbjct: 65  LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 392 LHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIG--IAQSLLYLH 449
             G   +     ++ + +  G                 +      + +   IA    YL 
Sbjct: 125 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 184
Query: 450 EECNQRVVHRDVKPSNILLDTY---LNAKLGDFGLAK-IYEHGANPQTTHIVGTLGYLAP 505
           E      +HRD+   N LL        AK+GDFG+A+ IY      +    +  + ++ P
Sbjct: 185 E---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 241
Query: 506 ELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELL 546
           E    G  T+ TD +S+G+L+ E+        P K+  E+L
Sbjct: 242 EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL 282

>pdb|1N47|A Chain A, Isolectin B4 From Vicia Villosa In Complex With The Tn Antigen Length = 233

Iteration: 1
 Score = 56.2 bits (134), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 105/251 (41%), Gaps = 32/251 (12%)
Query: 7   DTTSFLYNGFL--HANLSLEGAAYISTSGILTVTNKSEGL-----IGHALYPNPLRFKTS 59
           ++TSF +  F     NL L+  A ++++G L +T  + G      +G ALY  P+     
Sbjct: 2   ESTSFSFTNFNPNQNNLILQEDALVNSAGTLELTAVAAGAPVPDSLGRALYAAPIHIH-D 60
Query: 60  NKSVAIDFRTNFVFSILPKYPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTKF 119
           N ++A  F T+F F +          GLAF +   +         FLGL       +   
Sbjct: 61  NTTLA-SFTTSFSFVMAAPAAAAVADGLAFFLAPPDTQPQARGG-FLGL---FADRAHDA 115
Query: 120 STRMLAVEFDIIQNTELIDINDNHVGIDXXXXXXXXXXXXXYYSGNNHRIPILLRSGDPI 179
           S + +AVEFD   N    D N  H+GID                 +    P  +  G+  
Sbjct: 116 SYQTVAVEFDTYSNA--WDPNYTHIGIDTNGIE------------SKKTTPFDMVYGEKA 161
Query: 180 QAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGL---ITA 236
              + Y +    +  S+        Y   +S  +DL  ++ EY+  GFSA+TGL   +  
Sbjct: 162 NIVITYQASTKALAASLVFPVSQTSYA--VSARVDLRDILPEYVRVGFSATTGLNAGVVE 219
Query: 237 SHNVHGWSISI 247
           +H++  WS ++
Sbjct: 220 THDIVSWSFAV 230

>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor And Isoquinolinedione Inhibitor Length = 308

Iteration: 1
 Score = 55.8 bits (133), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 59/276 (21%), Positives = 114/276 (41%), Gaps = 29/276 (10%)
Query: 338 VGSGGFGRVYRGLMPSL-----GLEVAIKRIGHNSQQGMK-EFVAEIMSMGRLRHRNLVQ 391
           +G G FG VY G+   +        VAIK +   +    + EF+ E   M      ++V+
Sbjct: 27  LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 392 LHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXX-----XXXTWDQRYKILIGIAQSLL 446
           L G   +    L++ + +  G                      +  +  ++   IA  + 
Sbjct: 87  LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 146
Query: 447 YLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IYEHGANPQTTHIVGTLGYLAP 505
           YL+     + VHRD+   N ++      K+GDFG+ + I E     +    +  + +++P
Sbjct: 147 YLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSP 203
Query: 506 ELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAID 565
           E  + G  TT +DV+S+G+++ E+A    + +P +  +   ++ +V    +EG +    D
Sbjct: 204 ESLKDGVFTTYSDVWSFGVVLWEIAT--LAEQPYQGLSNEQVLRFV----MEGGLLDKPD 257
Query: 566 QTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVV 601
              D        ++  L   C   NP  RP    ++
Sbjct: 258 NCPD--------MLFELMRMCWQYNPKMRPSFLEII 285

>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 55.8 bits (133), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 48/215 (22%), Positives = 98/215 (45%), Gaps = 28/215 (13%)
Query: 338 VGSGGFGRVYRGLMPSLGLE---------VAIKRIGHN-SQQGMKEFVAEIMSMGRL-RH 386
           +G G FG+V   L  ++GL+         VA+K +  + +++ + + ++E+  M  + +H
Sbjct: 36  LGEGAFGQVV--LAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 387 RNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXX-----------XXXXXXXXTWDQRY 435
           +N++ L G C +   L ++ +Y   G+                           +     
Sbjct: 94  KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLV 153
Query: 436 KILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEH-GANPQTT 494
                +A+ + YL    +++ +HRD+   N+L+      K+ DFGLA+   H     +TT
Sbjct: 154 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTT 210
Query: 495 HIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEV 529
           +    + ++APE       T  +DV+S+G+L+ E+
Sbjct: 211 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 245

>pdb|2E7Q|A Chain A, Crystal Structure Of Basic Winged Bean Lectin In Complex With B Blood Group Trisaccharide Length = 237

Iteration: 1
 Score = 55.8 bits (133), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 69/255 (27%), Positives = 103/255 (40%), Gaps = 40/255 (15%)
Query: 8   TTSFLYNGFLHAN---LSLEGAAYISTSGILTVTNKSEGL-----IGHALYPNPLRFKTS 59
           T SF +N F H N   L L+  A IS++ +L +T    G+      G ALY  P++   S
Sbjct: 2   TISFNFNQF-HQNEEQLKLQRDARISSNSVLELTKVVNGVPTWNSTGRALYAKPVQVWDS 60
Query: 60  NKSVAIDFRTNFVFSILPKYP-DLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTK 118
                  F T F FSI   +P      GL F I   N  +      + G+ N        
Sbjct: 61  TTGNVASFETRFSFSIRQPFPRPHPADGLVFFIAPPNT-QTGEGGGYFGIYNPLSPYP-- 117
Query: 119 FSTRMLAVEFDIIQNTELIDINDNHVGIDXXXXXXXXXXXXXYYSGNNHRIPILLRSGDP 178
                +AVEFD  +NT   D    H+GID                 +   +P  L +G  
Sbjct: 118 ----FVAVEFDTFRNT--WDPQIPHIGIDVNSVI------------STKTVPFTLDNGGI 159
Query: 179 IQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTG------ 232
               + Y +   +++V +    +   Y   I+  +DL  V+ E +  GFSA+TG      
Sbjct: 160 ANVVIKYDASTKILHVVLVFPSLGTIY--TIADIVDLKQVLPESVNVGFSAATGDPSGKQ 217
Query: 233 -LITASHNVHGWSIS 246
              T +H++  WS S
Sbjct: 218 RNATETHDILSWSFS 232

>pdb|1WBF|A Chain A, Winged Bean Lectin, Saccharide Free Form Length = 242

Iteration: 1
 Score = 55.8 bits (133), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 69/255 (27%), Positives = 103/255 (40%), Gaps = 40/255 (15%)
Query: 8   TTSFLYNGFLHAN---LSLEGAAYISTSGILTVTNKSEGL-----IGHALYPNPLRFKTS 59
           T SF +N F H N   L L+  A IS++ +L +T    G+      G ALY  P++   S
Sbjct: 3   TISFNFNQF-HQNEEQLKLQRDARISSNSVLELTKVVNGVPTWNSTGRALYAKPVQVWDS 61
Query: 60  NKSVAIDFRTNFVFSILPKYP-DLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTK 118
                  F T F FSI   +P      GL F I   N  +      + G+ N        
Sbjct: 62  TTGNVASFETRFSFSIRQPFPRPHPADGLVFFIAPPNT-QTGEGGGYFGIYNPLSPYP-- 118
Query: 119 FSTRMLAVEFDIIQNTELIDINDNHVGIDXXXXXXXXXXXXXYYSGNNHRIPILLRSGDP 178
                +AVEFD  +NT   D    H+GID                 +   +P  L +G  
Sbjct: 119 ----FVAVEFDTFRNT--WDPQIPHIGIDVNSVI------------STKTVPFTLDNGGI 160
Query: 179 IQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTG------ 232
               + Y +   +++V +    +   Y   I+  +DL  V+ E +  GFSA+TG      
Sbjct: 161 ANVVIKYDASTKILHVVLVFPSLGTIY--TIADIVDLKQVLPESVNVGFSAATGDPSGKQ 218
Query: 233 -LITASHNVHGWSIS 246
              T +H++  WS S
Sbjct: 219 RNATETHDILSWSFS 233

>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer Length = 319

Iteration: 1
 Score = 55.8 bits (133), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 54/222 (24%), Positives = 90/222 (40%), Gaps = 24/222 (10%)
Query: 336 NLVGSGGFGRVYRGLMPSLGLEVAIK--RIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLH 393
            L+G G FG+VY G       EVAI+   I  +++  +K F  E+M+  + RH N+V   
Sbjct: 39  ELIGKGRFGQVYHGRWHG---EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFM 95
Query: 394 GWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECN 453
           G C     L ++       +                T     +I   I + + YLH +  
Sbjct: 96  GACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKT----RQIAQEIVKGMGYLHAKG- 150
Query: 454 QRVVHRDVKPSNILLDT--YLNAKLGDFGLAKIYEHGANPQTTHIV-GTLGYLAPELTRT 510
             ++H+D+K  N+  D    +    G F ++ + + G       I  G L +LAPE+ R 
Sbjct: 151 --ILHKDLKSKNVFYDNGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQ 208
Query: 511 GKATTS---------TDVYSYGILMLEVACGRRSIEPQKAAA 543
               T          +DV++ G +  E+       + Q A A
Sbjct: 209 LSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEA 250

>pdb|1WBL|A Chain A, Winged Bean Lectin Complexed With Methyl-Alpha-D-Galactose Length = 241

Iteration: 1
 Score = 55.5 bits (132), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 69/255 (27%), Positives = 103/255 (40%), Gaps = 40/255 (15%)
Query: 8   TTSFLYNGFLHAN---LSLEGAAYISTSGILTVTNKSEGL-----IGHALYPNPLRFKTS 59
           T SF +N F H N   L L+  A IS++ +L +T    G+      G ALY  P++   S
Sbjct: 2   TISFNFNQF-HQNEEQLKLQRDARISSNSVLELTKVVNGVPTWNSTGRALYAKPVQVWDS 60
Query: 60  NKSVAIDFRTNFVFSILPKYP-DLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTK 118
                  F T F FSI   +P      GL F I   N  +      + G+ N        
Sbjct: 61  TTGNVASFETRFSFSIRQPFPRPHPADGLVFFIAPPNT-QTGEGGGYFGIYNPLSPYP-- 117
Query: 119 FSTRMLAVEFDIIQNTELIDINDNHVGIDXXXXXXXXXXXXXYYSGNNHRIPILLRSGDP 178
                +AVEFD  +NT   D    H+GID                 +   +P  L +G  
Sbjct: 118 ----FVAVEFDTFRNT--WDPQIPHIGIDVNSVI------------STKTVPFTLDNGGI 159
Query: 179 IQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTG------ 232
               + Y +   +++V +    +   Y   I+  +DL  V+ E +  GFSA+TG      
Sbjct: 160 ANVVIKYDASTKILHVVLVFPSLGTIY--TIADIVDLKQVLPESVNVGFSAATGDPSGKQ 217
Query: 233 -LITASHNVHGWSIS 246
              T +H++  WS S
Sbjct: 218 RNATETHDILSWSFS 232

>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb Length = 350

Iteration: 1
 Score = 55.5 bits (132), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 50/198 (25%), Positives = 83/198 (41%), Gaps = 15/198 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRN---LVQLHG 394
           +G+G FGRV        G   A+K +       +K+    +     L+  N   LV+L  
Sbjct: 49  LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 395 WCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQ 454
             +    L +V +Y P G                  +         I  +  YLH   + 
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLH---SL 160
Query: 455 RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKAT 514
            +++RD+KP N+++D     K+ DFG AK        +T  + GT  YLAPE+  +    
Sbjct: 161 DLIYRDLKPENLMIDQQGYIKVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 515 TSTDVYSYGILMLEVACG 532
            + D ++ G+L+ E+A G
Sbjct: 217 KAVDWWALGVLIYEMAAG 234

>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In Complex With P38 Map Kinase Length = 360

Iteration: 1
 Score = 55.5 bits (132), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 89/207 (42%), Gaps = 19/207 (9%)
Query: 335 QNL--VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGM--KEFVAEIMSMGRLRHRN-- 388
           QNL  VGSG +G V        G  VA+K++    Q  +  K    E+  +  ++H N  
Sbjct: 25  QNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 84
Query: 389 -LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
            L+ +    R  +E   VY      +                T D    ++  I + L Y
Sbjct: 85  GLLDVFTPARSLEEFNDVYLV----THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
           +H   +  ++HRD+KPSN+ ++     K+ DF LA+      + + T  V T  Y APE+
Sbjct: 141 IH---SADIIHRDLKPSNLAVNEDCELKILDFYLAR----HTDDEMTGYVATRWYRAPEI 193
Query: 508 TRTGKATTST-DVYSYGILMLEVACGR 533
                    T D++S G +M E+  GR
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain Length = 402

Iteration: 1
 Score = 55.5 bits (132), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 68/150 (45%), Gaps = 17/150 (11%)
Query: 389 LVQLHGWCRKQDE--LLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLL 446
           +VQL  +C  QD+  L +V +Y+P G                  W + Y      A+ +L
Sbjct: 137 VVQL--FCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPE----KWAKFY-----TAEVVL 185
Query: 447 YLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPE 506
            L    +  ++HRDVKP N+LLD + + KL DFG     +          VGT  Y++PE
Sbjct: 186 ALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPE 245
Query: 507 LTRT----GKATTSTDVYSYGILMLEVACG 532
           + ++    G      D +S G+ + E+  G
Sbjct: 246 VLKSQGGDGYYGRECDWWSVGVFLFEMLVG 275

>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine Length = 295

Iteration: 1
 Score = 55.5 bits (132), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 93/198 (46%), Gaps = 20/198 (10%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIK----RIGHNSQQGM--KEFVAEIMSMGRLRHRNLVQ 391
           +GSG F  V +    S GL+ A K    R   +S++G+  ++   E+  +  ++H N++ 
Sbjct: 19  LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 392 LHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEE 451
           LH     + +++L+ + V  G                 T ++  + L  I   + YLH  
Sbjct: 79  LHEVYENKTDVILIGELVAGGE-----LFDFLAEKESLTEEEATEFLKQILNGVYYLH-- 131
Query: 452 CNQRVVHRDVKPSNI-LLDTYL---NAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
            + ++ H D+KP NI LLD  +     K+ DFGLA   + G   +  +I GT  ++APE+
Sbjct: 132 -SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN--EFKNIFGTPEFVAPEI 188
Query: 508 TRTGKATTSTDVYSYGIL 525
                     D++S G++
Sbjct: 189 VNYEPLGLEADMWSIGVI 206

>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein Kinase A (Pka) Length = 350

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 84/198 (42%), Gaps = 15/198 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRN---LVQLHG 394
           +G+G FGRV        G   A+K +       +K+    +     L+  N   LV+L  
Sbjct: 49  LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 395 WCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQ 454
             +    L +V +Y P G                  +         I  +  YLH   + 
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARF-----YAAQIVLTFEYLH---SL 160
Query: 455 RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKAT 514
            +++RD+KP N+++D     K+ DFG AK        +T  + GT  YLAPE+  +    
Sbjct: 161 DLIYRDLKPENLMIDQQGYIKVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 515 TSTDVYSYGILMLEVACG 532
            + D ++ G+L+ E+A G
Sbjct: 217 KAVDWWALGVLIYEMAAG 234

>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7- Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2- Phenylcyclopropyl)urea Length = 293

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/202 (26%), Positives = 86/202 (42%), Gaps = 15/202 (7%)
Query: 334 EQNLVGSGGFGRVYRGLMP----SLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNL 389
           E   +GSG FG V +G          + V I +   N      E +AE   M +L +  +
Sbjct: 31  EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 90
Query: 390 VQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLH 449
           V++ G C + +  +LV +    G                       +++  ++  + YL 
Sbjct: 91  VRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNII-----ELVHQVSMGMKYLE 144
Query: 450 EECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGAN--PQTTHIVGTLGYLAPEL 507
           E      VHRD+   N+LL T   AK+ DFGL+K      N     TH    + + APE 
Sbjct: 145 E---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 201
Query: 508 TRTGKATTSTDVYSYGILMLEV 529
               K ++ +DV+S+G+LM E 
Sbjct: 202 INYYKFSSKSDVWSFGVLMWEA 223

>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic Domain With Pyrazolylbenzimidazole Inhibitor 416 Length = 299

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/202 (26%), Positives = 86/202 (42%), Gaps = 15/202 (7%)
Query: 334 EQNLVGSGGFGRVYRGLMP----SLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNL 389
           E   +GSG FG V +G          + V I +   N      E +AE   M +L +  +
Sbjct: 31  EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 90
Query: 390 VQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLH 449
           V++ G C + +  +LV +    G                       +++  ++  + YL 
Sbjct: 91  VRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNII-----ELVHQVSMGMKYLE 144
Query: 450 EECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGAN--PQTTHIVGTLGYLAPEL 507
           E      VHRD+   N+LL T   AK+ DFGL+K      N     TH    + + APE 
Sbjct: 145 E---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 201
Query: 508 TRTGKATTSTDVYSYGILMLEV 529
               K ++ +DV+S+G+LM E 
Sbjct: 202 INYYKFSSKSDVWSFGVLMWEA 223

>pdb|1GZ9|A Chain A, High-Resolution Crystal Structure Of Erythrina Cristagalli Lectin In Complex With 2'-Alpha-L-Fucosyllactose Length = 239

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 100/251 (39%), Gaps = 31/251 (12%)
Query: 7   DTTSFLYNGFL--HANLSLEGAAYISTSGILTVTNKSEGLI------GHALYPNPLRFKT 58
           +T SF ++ F   + NL+L+GAA I+ SG+L +T  ++  +      G  LY  P+    
Sbjct: 2   ETISFSFSEFEPGNDNLTLQGAALITQSGVLQLTKINQNGMPAWDSTGRTLYTKPVHMWD 61
Query: 59  SNKSVAIDFRTNFVFSILPKYP-DLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSST 117
           S       F T F FSI   Y   L   GL F +     P      Q  G   +  +S  
Sbjct: 62  STTGTVASFETRFSFSIEQPYTRPLPADGLVFFM----GPTKSKPAQGYGYLGVFNNSKQ 117
Query: 118 KFSTRMLAVEFDIIQNTELIDINDNHVGIDXXXXXXXXXXXXXYYSGNNHRIPILLRSGD 177
             S + LAVEFD   N         H+GID                      P  L +G 
Sbjct: 118 DNSYQTLAVEFDTFSN-PWDPPQVPHIGIDVNSIRSIKTQ------------PFQLDNGQ 164
Query: 178 PIQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGL---I 234
                + Y +   +++V +        Y   I+  +D+  V+ +++  G S +TG     
Sbjct: 165 VANVVIKYDAPSKILHVVLVYPSSGAIYT--IAEIVDVKQVLPDWVDVGLSGATGAQRDA 222
Query: 235 TASHNVHGWSI 245
             +H+V+ WS 
Sbjct: 223 AETHDVYSWSF 233

>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor Length = 358

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 93/212 (43%), Gaps = 15/212 (7%)
Query: 327 SVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGH--NSQQGMKEFVAEIMSMGRL 384
           +V K +     +GSG  G V       L   VAIK++     +Q   K    E++ M  +
Sbjct: 15  TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCV 74
Query: 385 RHRNLVQLHGWCRKQ---DELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGI 441
            H+N++ L      Q   +E   VY  +                    ++   Y++L GI
Sbjct: 75  NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY-LLYQMLCGI 133
Query: 442 AQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLG 501
                +LH   +  ++HRD+KPSNI++ +    K+ DFGLA+    G +   T  V T  
Sbjct: 134 K----HLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRY 184
Query: 502 YLAPELTRTGKATTSTDVYSYGILMLEVACGR 533
           Y APE+        + D++S G +M E+ C +
Sbjct: 185 YRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 216

>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylaminopyrimidines As Potent Inhibitors Of Spleen Tyrosine Kinase (Syk) Length = 291

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/202 (26%), Positives = 86/202 (42%), Gaps = 15/202 (7%)
Query: 334 EQNLVGSGGFGRVYRGLMP----SLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNL 389
           E   +GSG FG V +G          + V I +   N      E +AE   M +L +  +
Sbjct: 29  EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 88
Query: 390 VQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLH 449
           V++ G C + +  +LV +    G                       +++  ++  + YL 
Sbjct: 89  VRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNII-----ELVHQVSMGMKYLE 142
Query: 450 EECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGAN--PQTTHIVGTLGYLAPEL 507
           E      VHRD+   N+LL T   AK+ DFGL+K      N     TH    + + APE 
Sbjct: 143 E---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 199
Query: 508 TRTGKATTSTDVYSYGILMLEV 529
               K ++ +DV+S+G+LM E 
Sbjct: 200 INYYKFSSKSDVWSFGVLMWEA 221

>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With A Sulfonamidopyrazine Piperidine Inhibitor Length = 274

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/202 (26%), Positives = 86/202 (42%), Gaps = 15/202 (7%)
Query: 334 EQNLVGSGGFGRVYRGLMP----SLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNL 389
           E   +GSG FG V +G          + V I +   N      E +AE   M +L +  +
Sbjct: 11  EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 70
Query: 390 VQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLH 449
           V++ G C + +  +LV +    G                       +++  ++  + YL 
Sbjct: 71  VRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNII-----ELVHQVSMGMKYLE 124
Query: 450 EECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGAN--PQTTHIVGTLGYLAPEL 507
           E      VHRD+   N+LL T   AK+ DFGL+K      N     TH    + + APE 
Sbjct: 125 E---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 181
Query: 508 TRTGKATTSTDVYSYGILMLEV 529
               K ++ +DV+S+G+LM E 
Sbjct: 182 INYYKFSSKSDVWSFGVLMWEA 203

>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/202 (26%), Positives = 86/202 (42%), Gaps = 15/202 (7%)
Query: 334 EQNLVGSGGFGRVYRGLMP----SLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNL 389
           E   +GSG FG V +G          + V I +   N      E +AE   M +L +  +
Sbjct: 15  EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 74
Query: 390 VQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLH 449
           V++ G C + +  +LV +    G                       +++  ++  + YL 
Sbjct: 75  VRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNII-----ELVHQVSMGMKYLE 128
Query: 450 EECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGAN--PQTTHIVGTLGYLAPEL 507
           E      VHRD+   N+LL T   AK+ DFGL+K      N     TH    + + APE 
Sbjct: 129 E---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 185
Query: 508 TRTGKATTSTDVYSYGILMLEV 529
               K ++ +DV+S+G+LM E 
Sbjct: 186 INYYKFSSKSDVWSFGVLMWEA 207

>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/202 (26%), Positives = 86/202 (42%), Gaps = 15/202 (7%)
Query: 334 EQNLVGSGGFGRVYRGLMP----SLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNL 389
           E   +GSG FG V +G          + V I +   N      E +AE   M +L +  +
Sbjct: 15  EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 74
Query: 390 VQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLH 449
           V++ G C + +  +LV +    G                       +++  ++  + YL 
Sbjct: 75  VRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNII-----ELVHQVSMGMKYLE 128
Query: 450 EECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGAN--PQTTHIVGTLGYLAPEL 507
           E      VHRD+   N+LL T   AK+ DFGL+K      N     TH    + + APE 
Sbjct: 129 E---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPEC 185
Query: 508 TRTGKATTSTDVYSYGILMLEV 529
               K ++ +DV+S+G+LM E 
Sbjct: 186 INYYKFSSKSDVWSFGVLMWEA 207

>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain Length = 291

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/202 (26%), Positives = 86/202 (42%), Gaps = 15/202 (7%)
Query: 334 EQNLVGSGGFGRVYRGLMP----SLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNL 389
           E   +GSG FG V +G          + V I +   N      E +AE   M +L +  +
Sbjct: 21  EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 80
Query: 390 VQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLH 449
           V++ G C + +  +LV +    G                       +++  ++  + YL 
Sbjct: 81  VRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNII-----ELVHQVSMGMKYLE 134
Query: 450 EECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGAN--PQTTHIVGTLGYLAPEL 507
           E      VHRD+   N+LL T   AK+ DFGL+K      N     TH    + + APE 
Sbjct: 135 E---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 191
Query: 508 TRTGKATTSTDVYSYGILMLEV 529
               K ++ +DV+S+G+LM E 
Sbjct: 192 INYYKFSSKSDVWSFGVLMWEA 213

>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 93/211 (44%), Gaps = 15/211 (7%)
Query: 327 SVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGH--NSQQGMKEFVAEIMSMGRL 384
           +V K +     +GSG  G V       L   VAIK++     +Q   K    E++ M  +
Sbjct: 21  TVLKRYQNLKPIGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVV 80
Query: 385 RHRNLVQLHGWCRKQ---DELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGI 441
            H+N++ L      Q   +E   VY  +                    ++   Y++L+GI
Sbjct: 81  NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSY-LLYQMLVGI 139
Query: 442 AQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLG 501
                +LH      ++HRD+KPSNI++ +    K+ DFGLA+    G +   T  V T  
Sbjct: 140 K----HLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLART--AGTSFMMTPYVVTRY 190
Query: 502 YLAPELTRTGKATTSTDVYSYGILMLEVACG 532
           Y APE+        + D++S G++M E+  G
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221

>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836 Length = 273

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/202 (26%), Positives = 86/202 (42%), Gaps = 15/202 (7%)
Query: 334 EQNLVGSGGFGRVYRGLMP----SLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNL 389
           E   +GSG FG V +G          + V I +   N      E +AE   M +L +  +
Sbjct: 9   EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 68
Query: 390 VQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLH 449
           V++ G C + +  +LV +    G                       +++  ++  + YL 
Sbjct: 69  VRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNII-----ELVHQVSMGMKYLE 122
Query: 450 EECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGAN--PQTTHIVGTLGYLAPEL 507
           E      VHRD+   N+LL T   AK+ DFGL+K      N     TH    + + APE 
Sbjct: 123 E---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 179
Query: 508 TRTGKATTSTDVYSYGILMLEV 529
               K ++ +DV+S+G+LM E 
Sbjct: 180 INYYKFSSKSDVWSFGVLMWEA 201

>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine Inhibitor Length = 369

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 93/212 (43%), Gaps = 15/212 (7%)
Query: 327 SVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGH--NSQQGMKEFVAEIMSMGRL 384
           +V K +     +GSG  G V       L   VAIK++     +Q   K    E++ M  +
Sbjct: 26  TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCV 85
Query: 385 RHRNLVQLHGWCRKQ---DELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGI 441
            H+N++ L      Q   +E   VY  +                    ++   Y++L GI
Sbjct: 86  NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY-LLYQMLCGI 144
Query: 442 AQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLG 501
                +LH   +  ++HRD+KPSNI++ +    K+ DFGLA+    G +   T  V T  
Sbjct: 145 K----HLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRY 195
Query: 502 YLAPELTRTGKATTSTDVYSYGILMLEVACGR 533
           Y APE+        + D++S G +M E+ C +
Sbjct: 196 YRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 227

>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fibroblast Growth Factor Receptor 1 Length = 310

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/215 (22%), Positives = 98/215 (45%), Gaps = 28/215 (13%)
Query: 338 VGSGGFGRVYRGLMPSLGLE---------VAIKRIGHN-SQQGMKEFVAEIMSMGRL-RH 386
           +G G FG+V   L  ++GL+         VA+K +  + +++ + + ++E+  M  + +H
Sbjct: 29  LGEGAFGQVV--LAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 86
Query: 387 RNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXX-----------XXXXXXXXTWDQRY 435
           +N++ L G C +   L ++ +Y   G+                           +     
Sbjct: 87  KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 146
Query: 436 KILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEH-GANPQTT 494
                +A+ + YL    +++ +HRD+   N+L+      K+ DFGLA+   H     +TT
Sbjct: 147 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 203
Query: 495 HIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEV 529
           +    + ++APE       T  +DV+S+G+L+ E+
Sbjct: 204 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 238

>pdb|1DHK|B Chain B, Structure Of Porcine Pancreatic Alpha-Amylase Length = 223

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/244 (24%), Positives = 98/244 (40%), Gaps = 46/244 (18%)
Query: 6   ADTTSFLYNGFLHANLSLEGAAYISTSGILTVTNKSEGLIGHALYPNPLRFKTSNKSVAI 65
           A  TSF+ + F   NL L+G A +S++G L ++  S   +  A Y  P++ + S      
Sbjct: 1   ATETSFIIDAFNKTNLILQGDATVSSNGNLQLSYNSYDSMSRAFYSAPIQIRDSTTGNVA 60
Query: 66  DFRTNFVFSILPKYPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTKFSTRMLA 125
            F TNF  +I          GL F+++   +PE                  +K  T  + 
Sbjct: 61  SFDTNFTMNIRTHRQANSAVGLDFVLVPV-QPE------------------SKGDT--VT 99
Query: 126 VEFDIIQNTELIDINDNHVGIDXXXXXXXXXXXXXYYSGNNHRIPILLRSGDPIQAWVDY 185
           VEFD   +   ID+N+N +                 Y G N  + I             Y
Sbjct: 100 VEFDTFLSRISIDVNNNDI--------KSVPWDVHDYDGQNAEVRIT------------Y 139
Query: 186 SSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLITAS---HNVHG 242
           +S   + +VS+      K     +S  ++L   + +++  GFSA++G    S   H+V  
Sbjct: 140 NSSTKVFSVSLSNPSTGKSNN--VSTTVELEKEVYDWVSVGFSATSGAYQWSYETHDVLS 197
Query: 243 WSIS 246
           WS S
Sbjct: 198 WSFS 201

>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4-Ylamino)-2- Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide Length = 320

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/100 (37%), Positives = 55/100 (55%), Gaps = 8/100 (8%)
Query: 436 KILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYL-NA--KLGDFGLAKIYEHGANPQ 492
           +I+  I +++ YLH   +  + HRDVKP N+L  +   NA  KL DFG AK  E  ++  
Sbjct: 119 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK--ETTSHNS 173
Query: 493 TTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACG 532
            T    T  Y+APE+    K   S D++S G++M  + CG
Sbjct: 174 LTEPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 213

>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor 1 Kinase Domain In Complex With Compound 1 Length = 309

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/215 (22%), Positives = 98/215 (45%), Gaps = 28/215 (13%)
Query: 338 VGSGGFGRVYRGLMPSLGLE---------VAIKRIGHN-SQQGMKEFVAEIMSMGRL-RH 386
           +G G FG+V   L  ++GL+         VA+K +  + +++ + + ++E+  M  + +H
Sbjct: 28  LGEGAFGQVV--LAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 85
Query: 387 RNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXX-----------XXXXXXXXTWDQRY 435
           +N++ L G C +   L ++ +Y   G+                           +     
Sbjct: 86  KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 145
Query: 436 KILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEH-GANPQTT 494
                +A+ + YL    +++ +HRD+   N+L+      K+ DFGLA+   H     +TT
Sbjct: 146 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 202
Query: 495 HIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEV 529
           +    + ++APE       T  +DV+S+G+L+ E+
Sbjct: 203 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 237

>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1 Length = 327

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 53/96 (55%), Gaps = 6/96 (6%)
Query: 438 LIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTH-I 496
           L  I+ +L +LH+   + +++RD+KP NI+L+   + KL DFGL K   H      TH  
Sbjct: 127 LAEISMALGHLHQ---KGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT--VTHXF 181
Query: 497 VGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACG 532
            GT+ Y+APE+        + D +S G LM ++  G
Sbjct: 182 CGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217

>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In Complex With Arq 069 Length = 306

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/215 (22%), Positives = 98/215 (45%), Gaps = 28/215 (13%)
Query: 338 VGSGGFGRVYRGLMPSLGLE---------VAIKRIGHN-SQQGMKEFVAEIMSMGRL-RH 386
           +G G FG+V   L  ++GL+         VA+K +  + +++ + + ++E+  M  + +H
Sbjct: 25  LGEGAFGQVV--LAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 82
Query: 387 RNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXX-----------XXXXXXXXTWDQRY 435
           +N++ L G C +   L ++ +Y   G+                           +     
Sbjct: 83  KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 142
Query: 436 KILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEH-GANPQTT 494
                +A+ + YL    +++ +HRD+   N+L+      K+ DFGLA+   H     +TT
Sbjct: 143 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 199
Query: 495 HIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEV 529
           +    + ++APE       T  +DV+S+G+L+ E+
Sbjct: 200 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 234

>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C Beta Ii Complexed With A Bisindolylmaleimide Inhibitor Length = 353

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 69/150 (46%), Gaps = 11/150 (7%)
Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYL 448
           L QLH   +  D L  V +YV  G                  +   Y   I I   L +L
Sbjct: 83  LTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVF---YAAEIAIG--LFFL 137
Query: 449 HEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTH-IVGTLGYLAPEL 507
               ++ +++RD+K  N++LD+  + K+ DFG+ K  E+  +  TT    GT  Y+APE+
Sbjct: 138 Q---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCK--ENIWDGVTTKXFCGTPDYIAPEI 192
Query: 508 TRTGKATTSTDVYSYGILMLEVACGRRSIE 537
                   S D +++G+L+ E+  G+   E
Sbjct: 193 IAYQPYGKSVDWWAFGVLLYEMLAGQAPFE 222

>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1 Length = 317

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/215 (22%), Positives = 98/215 (45%), Gaps = 28/215 (13%)
Query: 338 VGSGGFGRVYRGLMPSLGLE---------VAIKRIGHN-SQQGMKEFVAEIMSMGRL-RH 386
           +G G FG+V   L  ++GL+         VA+K +  + +++ + + ++E+  M  + +H
Sbjct: 36  LGEGAFGQVV--LAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 387 RNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXX-----------XXXXXXXXTWDQRY 435
           +N++ L G C +   L ++ +Y   G+                           +     
Sbjct: 94  KNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLV 153
Query: 436 KILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEH-GANPQTT 494
                +A+ + YL    +++ +HRD+   N+L+      K+ DFGLA+   H     +TT
Sbjct: 154 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 210
Query: 495 HIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEV 529
           +    + ++APE       T  +DV+S+G+L+ E+
Sbjct: 211 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 245

>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3- Methoxybenzyl)-7-Azaindole Length = 302

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/215 (22%), Positives = 98/215 (45%), Gaps = 28/215 (13%)
Query: 338 VGSGGFGRVYRGLMPSLGLE---------VAIKRIGHN-SQQGMKEFVAEIMSMGRL-RH 386
           +G G FG+V   L  ++GL+         VA+K +  + +++ + + ++E+  M  + +H
Sbjct: 21  LGEGAFGQVV--LAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 78
Query: 387 RNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXX-----------XXXXXXXXTWDQRY 435
           +N++ L G C +   L ++ +Y   G+                           +     
Sbjct: 79  KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLV 138
Query: 436 KILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEH-GANPQTT 494
                +A+ + YL    +++ +HRD+   N+L+      K+ DFGLA+   H     +TT
Sbjct: 139 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 195
Query: 495 HIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEV 529
           +    + ++APE       T  +DV+S+G+L+ E+
Sbjct: 196 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 230

>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast Growth Factor Receptor 1 In Complex With 5-(2-Thienyl) Nicotinic Acid Length = 317

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/215 (22%), Positives = 98/215 (45%), Gaps = 28/215 (13%)
Query: 338 VGSGGFGRVYRGLMPSLGLE---------VAIKRIGHN-SQQGMKEFVAEIMSMGRL-RH 386
           +G G FG+V   L  ++GL+         VA+K +  + +++ + + ++E+  M  + +H
Sbjct: 36  LGEGAFGQVV--LAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 387 RNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXX-----------XXXXXXXXTWDQRY 435
           +N++ L G C +   L ++ +Y   G+                           +     
Sbjct: 94  KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 153
Query: 436 KILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEH-GANPQTT 494
                +A+ + YL    +++ +HRD+   N+L+      K+ DFGLA+   H     +TT
Sbjct: 154 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 210
Query: 495 HIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEV 529
           +    + ++APE       T  +DV+S+G+L+ E+
Sbjct: 211 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 245

>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 635

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 88/202 (43%), Gaps = 15/202 (7%)
Query: 334 EQNLVGSGGFGRVYRGLMP----SLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNL 389
           E   +GSG FG V +G          + V I +   N      E +AE   M +L +  +
Sbjct: 373 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 432
Query: 390 VQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLH 449
           V++ G C + +  +LV +    G                       +++  ++  + YL 
Sbjct: 433 VRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNII-----ELVHQVSMGMKYL- 485
Query: 450 EECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGAN--PQTTHIVGTLGYLAPEL 507
           EE N   VHRD+   N+LL T   AK+ DFGL+K      N     TH    + + APE 
Sbjct: 486 EESN--FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 543
Query: 508 TRTGKATTSTDVYSYGILMLEV 529
               K ++ +DV+S+G+LM E 
Sbjct: 544 INYYKFSSKSDVWSFGVLMWEA 565

>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I) Length = 327

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 53/96 (55%), Gaps = 6/96 (6%)
Query: 438 LIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTH-I 496
           L  I+ +L +LH+   + +++RD+KP NI+L+   + KL DFGL K   H      TH  
Sbjct: 127 LAEISMALGHLHQ---KGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT--VTHTF 181
Query: 497 VGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACG 532
            GT+ Y+APE+        + D +S G LM ++  G
Sbjct: 182 CGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217

>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/215 (22%), Positives = 98/215 (45%), Gaps = 28/215 (13%)
Query: 338 VGSGGFGRVYRGLMPSLGLE---------VAIKRIGHN-SQQGMKEFVAEIMSMGRL-RH 386
           +G G FG+V   L  ++GL+         VA+K +  + +++ + + ++E+  M  + +H
Sbjct: 36  LGEGAFGQVV--LAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 387 RNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXX-----------XXXXXXXXTWDQRY 435
           +N++ L G C +   L ++ +Y   G+                           +     
Sbjct: 94  KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLV 153
Query: 436 KILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEH-GANPQTT 494
                +A+ + YL    +++ +HRD+   N+L+      K+ DFGLA+   H     +TT
Sbjct: 154 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 210
Query: 495 HIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEV 529
           +    + ++APE       T  +DV+S+G+L+ E+
Sbjct: 211 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 245

>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei, Pb000659.00.0 Length = 432

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/225 (25%), Positives = 96/225 (42%), Gaps = 40/225 (17%)
Query: 335 QNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQ--GMKEFVAEIMSMGRLRHRNLVQL 392
           ++L+G G +G VY     +    VAIK++    +     K  + EI  + RL+   +++L
Sbjct: 31  KHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRL 90
Query: 393 HGWC-----RKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
           +         K DEL +V +   +                  T    Y +L+G      +
Sbjct: 91  YDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTI--LYNLLLGEN----F 144
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE-------------------HG 488
           +HE     ++HRD+KP+N LL+   + K+ DFGLA+                      H 
Sbjct: 145 IHESG---IIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHN 201
Query: 489 ANPQ---TTHIVGTLGYLAPELTRTGKA-TTSTDVYSYGILMLEV 529
            N +   T+H+V T  Y APEL    +  T S D++S G +  E+
Sbjct: 202 KNLKKQLTSHVV-TRWYRAPELILLQENYTKSIDIWSTGCIFAEL 245

>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase Domain With 3-(2,6-Dichloro-3, 5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1- Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398) Length = 382

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/215 (22%), Positives = 98/215 (45%), Gaps = 28/215 (13%)
Query: 338 VGSGGFGRVYRGLMPSLGLE---------VAIKRIGHN-SQQGMKEFVAEIMSMGRL-RH 386
           +G G FG+V   L  ++GL+         VA+K +  + +++ + + ++E+  M  + +H
Sbjct: 77  LGEGAFGQVV--LAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 134
Query: 387 RNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXX-----------XXXXXXXXTWDQRY 435
           +N++ L G C +   L ++ +Y   G+                           +     
Sbjct: 135 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 194
Query: 436 KILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEH-GANPQTT 494
                +A+ + YL    +++ +HRD+   N+L+      K+ DFGLA+   H     +TT
Sbjct: 195 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 251
Query: 495 HIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEV 529
           +    + ++APE       T  +DV+S+G+L+ E+
Sbjct: 252 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 286

>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 93/211 (44%), Gaps = 15/211 (7%)
Query: 327 SVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGH--NSQQGMKEFVAEIMSMGRL 384
           +V K +     +GSG  G V       L   VAIK++     +Q   K    E++ M  +
Sbjct: 21  TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVV 80
Query: 385 RHRNLVQLHGWCRKQ---DELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGI 441
            H+N++ L      Q   +E   VY  +                    ++   Y++L+GI
Sbjct: 81  NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSY-LLYQMLVGI 139
Query: 442 AQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLG 501
                +LH      ++HRD+KPSNI++ +    K+ DFGLA+    G +   T  V T  
Sbjct: 140 K----HLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLART--AGTSFMMTPYVVTRY 190
Query: 502 YLAPELTRTGKATTSTDVYSYGILMLEVACG 532
           Y APE+        + D++S G++M E+  G
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221

>pdb|1FNY|A Chain A, Legume Lectin Of The Bark Of Robinia Pseudoacacia. Length = 237

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/230 (23%), Positives = 95/230 (41%), Gaps = 27/230 (11%)
Query: 24  EGAAYISTSGILTVTNKSEGL-----IGHALYPNPLRFKTSNKSVAIDFRTNFVFSILPK 78
           +G A ++++G+L +TN   G+     +G ALY  P +   S       F T+F F I   
Sbjct: 21  QGDALVTSTGVLQLTNVVNGVPSSKSLGRALYAAPFQIWDSTTGNVASFVTSFTFIIQAP 80
Query: 79  YPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTKFSTRMLAVEFDIIQNTELID 138
            P     GLAF +     P +       G+  I        S +++AVEFD   N +  D
Sbjct: 81  NPATTADGLAFFL----APVDTQPLDLGGMLGIFKDGYFNKSNQIVAVEFDTFSNGDW-D 135
Query: 139 INDNHVGIDXXXXXXXXXXXXXYYSGNNHRIPILLRSGDPIQAWVDYSSQEMLINVSICP 198
               H+GI+                     +P    +G+    ++ Y +    +  S+  
Sbjct: 136 PKGRHLGINVNSIESI------------KTVPWNWTNGEVANVFISYEASTKSLTASLVY 183
Query: 199 LGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGL---ITASHNVHGWSI 245
             +   +  +I   +D+  V+ E++  GFSA+TG+      +++V  WS 
Sbjct: 184 PSLETSF--IIDAIVDVKIVLPEWVRFGFSATTGIDKGYVQTNDVLSWSF 231

>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp Length = 350

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/198 (24%), Positives = 83/198 (41%), Gaps = 15/198 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRN---LVQLHG 394
           +G+G FGRV        G   A+K +       +K+    +     L+  N   LV+L  
Sbjct: 49  LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 395 WCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQ 454
             +    L +V +Y P G                  +         I  +  YLH   + 
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLH---SL 160
Query: 455 RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKAT 514
            +++RD+KP N+++D     ++ DFG AK        +T  + GT  YLAPE+  +    
Sbjct: 161 DLIYRDLKPENLMIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 515 TSTDVYSYGILMLEVACG 532
            + D ++ G+L+ E+A G
Sbjct: 217 KAVDWWALGVLIYEMAAG 234

>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein Kinase Domain Length = 387

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 52/201 (25%), Positives = 87/201 (43%), Gaps = 33/201 (16%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVA--EIMSMGRLRHRNLVQLHGW 395
           +GSG FG V+R +  + G     K I  N+   + ++    EI  M +L H  L+ LH  
Sbjct: 59  LGSGAFGVVHRCVEKATGRVFVAKFI--NTPYPLDKYTVKNEISIMNQLHHPKLINLHDA 116
Query: 396 CRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEEC--- 452
              + E++L+ +++  G                    + YK  +  A+ + Y+ + C   
Sbjct: 117 FEDKYEMVLILEFLSGGELFDRIAA------------EDYK--MSEAEVINYMRQACEGL 162
Query: 453 ----NQRVVHRDVKPSNILLDTYL--NAKLGDFGLAKIYEHGANPQTTHIV--GTLGYLA 504
                  +VH D+KP NI+ +T    + K+ DFGLA       NP     V   T  + A
Sbjct: 163 KHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLAT----KLNPDEIVKVTTATAEFAA 218
Query: 505 PELTRTGKATTSTDVYSYGIL 525
           PE+         TD+++ G+L
Sbjct: 219 PEIVDREPVGFYTDMWAIGVL 239

>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 636

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 88/202 (43%), Gaps = 15/202 (7%)
Query: 334 EQNLVGSGGFGRVYRGL----MPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNL 389
           E   +GSG FG V +G          + V I +   N      E +AE   M +L +  +
Sbjct: 374 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 433
Query: 390 VQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLH 449
           V++ G C + +  +LV +    G                       +++  ++  + YL 
Sbjct: 434 VRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNII-----ELVHQVSMGMKYL- 486
Query: 450 EECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGAN--PQTTHIVGTLGYLAPEL 507
           EE N   VHRD+   N+LL T   AK+ DFGL+K      N     TH    + + APE 
Sbjct: 487 EESN--FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 544
Query: 508 TRTGKATTSTDVYSYGILMLEV 529
               K ++ +DV+S+G+LM E 
Sbjct: 545 INYYKFSSKSDVWSFGVLMWEA 566

>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4- Chlorophenyl)-1-(7h-Pyrrolo(2, 3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine Length = 351

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 49/198 (24%), Positives = 82/198 (41%), Gaps = 15/198 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRN---LVQLHG 394
           +G+G FGRV        G   A+K +       +K+    +     L+  N   L +L  
Sbjct: 50  LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEF 109
Query: 395 WCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQ 454
             +    L +V +Y P G                  +         I  +  YLH   + 
Sbjct: 110 SFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLH---SL 161
Query: 455 RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKAT 514
            +++RD+KP N+++D     K+ DFG AK        +T  + GT  YLAPE+  +    
Sbjct: 162 DLIYRDLKPENLMIDQQGYIKVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYN 217
Query: 515 TSTDVYSYGILMLEVACG 532
            + D ++ G+L+ E+A G
Sbjct: 218 KAVDWWALGVLIYEMAAG 235

>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein Kinase C Beta Ii Length = 674

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 68/151 (45%), Gaps = 13/151 (8%)
Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYL 448
           L QLH   +  D L  V +YV  G                  +   Y   I I   L +L
Sbjct: 404 LTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVF---YAAEIAIG--LFFL 458
Query: 449 HEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK--IYEHGANPQTTHIVGTLGYLAPE 506
               ++ +++RD+K  N++LD+  + K+ DFG+ K  I++      T    GT  Y+APE
Sbjct: 459 Q---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD---GVTTKXFCGTPDYIAPE 512
Query: 507 LTRTGKATTSTDVYSYGILMLEVACGRRSIE 537
           +        S D +++G+L+ E+  G+   E
Sbjct: 513 IIAYQPYGKSVDWWAFGVLLYEMLAGQAPFE 543

>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 351

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 49/198 (24%), Positives = 82/198 (41%), Gaps = 15/198 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRN---LVQLHG 394
           +G+G FGRV        G   A+K +       +K+    +     L+  N   L +L  
Sbjct: 50  LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEF 109
Query: 395 WCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQ 454
             +    L +V +Y P G                  +         I  +  YLH   + 
Sbjct: 110 SFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLH---SL 161
Query: 455 RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKAT 514
            +++RD+KP N+++D     K+ DFG AK        +T  + GT  YLAPE+  +    
Sbjct: 162 DLIYRDLKPENLMIDQQGYIKVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYN 217
Query: 515 TSTDVYSYGILMLEVACG 532
            + D ++ G+L+ E+A G
Sbjct: 218 KAVDWWALGVLIYEMAAG 235

>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap Kinase-2 Length = 325

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/100 (37%), Positives = 55/100 (55%), Gaps = 8/100 (8%)
Query: 436 KILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYL-NA--KLGDFGLAKIYEHGANPQ 492
           +I+  I +++ YLH   +  + HRDVKP N+L  +   NA  KL DFG AK  E  ++  
Sbjct: 126 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK--ETTSHNS 180
Query: 493 TTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACG 532
            T    T  Y+APE+    K   S D++S G++M  + CG
Sbjct: 181 LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 220

>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h- Purin-6-yl)-benzyl)-amine Length = 351

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/198 (25%), Positives = 83/198 (41%), Gaps = 15/198 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRN---LVQLHG 394
           +G+G FGRV        G   A+K +       +K+    +     L+  N   L +L  
Sbjct: 50  LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEF 109
Query: 395 WCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQ 454
             +    L +V +Y P G                  +         I  +  YLH   + 
Sbjct: 110 SFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARF-----YAAQIVLTFEYLH---SL 161
Query: 455 RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKAT 514
            +++RD+KP N+++D     K+ DFG AK        +T  + GT  YLAPE+  +    
Sbjct: 162 DLIYRDLKPENLMIDQQGYIKVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYN 217
Query: 515 TSTDVYSYGILMLEVACG 532
            + D ++ G+L+ E+A G
Sbjct: 218 KAVDWWALGVLIYEMAAG 235

>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76 Length = 324

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/100 (37%), Positives = 55/100 (55%), Gaps = 8/100 (8%)
Query: 436 KILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYL-NA--KLGDFGLAKIYEHGANPQ 492
           +I+  I +++ YLH   +  + HRDVKP N+L  +   NA  KL DFG AK  E  ++  
Sbjct: 125 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK--ETTSHNS 179
Query: 493 TTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACG 532
            T    T  Y+APE+    K   S D++S G++M  + CG
Sbjct: 180 LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 219

>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To Mapkap Kinase-2 Length = 327

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/100 (37%), Positives = 55/100 (55%), Gaps = 8/100 (8%)
Query: 436 KILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYL-NA--KLGDFGLAKIYEHGANPQ 492
           +I+  I +++ YLH   +  + HRDVKP N+L  +   NA  KL DFG AK  E  ++  
Sbjct: 121 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK--ETTSHNS 175
Query: 493 TTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACG 532
            T    T  Y+APE+    K   S D++S G++M  + CG
Sbjct: 176 LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 215

>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1 Length = 319

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/100 (37%), Positives = 55/100 (55%), Gaps = 8/100 (8%)
Query: 436 KILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYL-NA--KLGDFGLAKIYEHGANPQ 492
           +I+  I +++ YLH   +  + HRDVKP N+L  +   NA  KL DFG AK  E  ++  
Sbjct: 120 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK--ETTSHNS 174
Query: 493 TTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACG 532
            T    T  Y+APE+    K   S D++S G++M  + CG
Sbjct: 175 LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 214

>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b Length = 318

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/100 (37%), Positives = 55/100 (55%), Gaps = 8/100 (8%)
Query: 436 KILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYL-NA--KLGDFGLAKIYEHGANPQ 492
           +I+  I +++ YLH   +  + HRDVKP N+L  +   NA  KL DFG AK  E  ++  
Sbjct: 119 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK--ETTSHNS 173
Query: 493 TTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACG 532
            T    T  Y+APE+    K   S D++S G++M  + CG
Sbjct: 174 LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 213

>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal Form-1, Soaking) Length = 326

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/100 (37%), Positives = 55/100 (55%), Gaps = 8/100 (8%)
Query: 436 KILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYL-NA--KLGDFGLAKIYEHGANPQ 492
           +I+  I +++ YLH   +  + HRDVKP N+L  +   NA  KL DFG AK  E  ++  
Sbjct: 127 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK--ETTSHNS 181
Query: 493 TTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACG 532
            T    T  Y+APE+    K   S D++S G++M  + CG
Sbjct: 182 LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 221

>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And Potent Inhibitors For Akt: Synthesis And Sar Studies Length = 337

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 51/204 (25%), Positives = 84/204 (41%), Gaps = 15/204 (7%)
Query: 332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRN--- 388
           F     +G+G FGRV        G   A+K +       +K+    +     L+  N   
Sbjct: 30  FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 89
Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYL 448
           LV+L    +    L +V +YV  G                  +         I  +  YL
Sbjct: 90  LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYL 144
Query: 449 HEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELT 508
           H   +  +++RD+KP N+L+D     ++ DFG AK        +T  + GT  YLAPE+ 
Sbjct: 145 H---SLDLIYRDLKPENLLIDEQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEII 197
Query: 509 RTGKATTSTDVYSYGILMLEVACG 532
            +     + D ++ G+L+ E+A G
Sbjct: 198 LSKGYNKAVDWWALGVLIYEMAAG 221

>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A Ruthenium Organometallic Ligand Ru1 Length = 312

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 72/288 (25%), Positives = 107/288 (37%), Gaps = 66/288 (22%)
Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEF---------VAEIMSMGRLR-H 386
           L+G GGFG V+ G   +  L+VAIK I  N   G             VA +  +G    H
Sbjct: 38  LLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGH 97
Query: 387 RNLVQLHGWCRKQDELLLV----------YDYVPNGSXXXXXXXXXXXXXXXXTWDQRYK 436
             +++L  W   Q+  +LV          +DY+                      +   +
Sbjct: 98  PGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLG---------------EGPSR 142
Query: 437 ILIGIAQSLLYLHEECNQR-VVHRDVKPSNILLDTYLN-AKLGDFGLAKIYEHGANPQTT 494
              G   + +   + C+ R VVHRD+K  NIL+D     AKL DFG   +     +   T
Sbjct: 143 CFFGQVVAAI---QHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLH---DEPYT 196
Query: 495 HIVGTLGYLAPE-LTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKE 553
              GT  Y  PE ++R         V+S GIL+ ++ CG    E  +   E        E
Sbjct: 197 DFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEILE-------AE 249
Query: 554 LHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVV 601
           LH    ++                    L   C AP P  RP +  ++
Sbjct: 250 LHFPAHVSPD---------------CCALIRRCLAPKPSSRPSLEEIL 282

>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2 Length = 400

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/100 (37%), Positives = 55/100 (55%), Gaps = 8/100 (8%)
Query: 436 KILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYL-NA--KLGDFGLAKIYEHGANPQ 492
           +I+  I +++ YLH   +  + HRDVKP N+L  +   NA  KL DFG AK  E  ++  
Sbjct: 165 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK--ETTSHNS 219
Query: 493 TTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACG 532
            T    T  Y+APE+    K   S D++S G++M  + CG
Sbjct: 220 LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 259

>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer Length = 406

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/100 (37%), Positives = 55/100 (55%), Gaps = 8/100 (8%)
Query: 436 KILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYL-NA--KLGDFGLAKIYEHGANPQ 492
           +I+  I +++ YLH   +  + HRDVKP N+L  +   NA  KL DFG AK  E  ++  
Sbjct: 171 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK--ETTSHNS 225
Query: 493 TTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACG 532
            T    T  Y+APE+    K   S D++S G++M  + CG
Sbjct: 226 LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 265

>pdb|1SFY|A Chain A, Crystal Structure Of Recombinant Erythrina Corallodandron Lectin Length = 239

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 98/251 (39%), Gaps = 31/251 (12%)
Query: 7   DTTSFLYNGFL--HANLSLEGAAYISTSGILTVTNKSEGLI------GHALYPNPLRFKT 58
           +T SF ++ F   + NL+L+GA+ I+ SG+L +T  ++  +      G  LY  P+    
Sbjct: 2   ETISFSFSEFEPGNDNLTLQGASLITQSGVLQLTKINQNGMPAWDSTGRTLYAKPVHIWD 61
Query: 59  SNKSVAIDFRTNFVFSILPKYP-DLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSST 117
                   F T F FSI   Y   L   GL F +     P      Q  G   I  +S  
Sbjct: 62  MTTGTVASFETRFSFSIEQPYTRPLPADGLVFFM----GPTKSKPAQGYGYLGIFNNSKQ 117
Query: 118 KFSTRMLAVEFDIIQNTELIDINDNHVGIDXXXXXXXXXXXXXYYSGNNHRIPILLRSGD 177
             S + L VEFD   N +       H+GID                      P  L +G 
Sbjct: 118 DNSYQTLGVEFDTFSN-QWDPPQVPHIGIDVNSIRSIKTQ------------PFQLDNGQ 164
Query: 178 PIQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGL---I 234
                + Y +   L++  +        Y   I+  +D+  V+ E++  G S +TG     
Sbjct: 165 VANVVIKYDASSKLLHAVLVYPSSGAIYT--IAEIVDVKQVLPEWVDVGLSGATGAQRDA 222
Query: 235 TASHNVHGWSI 245
             +H+V+ WS 
Sbjct: 223 AETHDVYSWSF 233

>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native Length = 351

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/201 (24%), Positives = 91/201 (45%), Gaps = 15/201 (7%)
Query: 336 NLVGSGGFGRVYRGLMPSLGLEVAIKRIG---HNSQQGM--KEFVAEIMSMGRLRHRNLV 390
            ++G G F  V R +    G + A+K +      S  G+  ++   E      L+H ++V
Sbjct: 30  EVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV 89
Query: 391 QLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHE 450
           +L         L +V++++ +G+                +       +  I ++L Y H 
Sbjct: 90  ELLETYSSDGMLYMVFEFM-DGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH- 147
Query: 451 ECNQRVVHRDVKPSNILLDTYLNA---KLGDFGLA-KIYEHGANPQTTHIVGTLGYLAPE 506
             +  ++HRDVKP N+LL +  N+   KLGDFG+A ++ E G        VGT  ++APE
Sbjct: 148 --DNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGR--VGTPHFMAPE 203
Query: 507 LTRTGKATTSTDVYSYGILML 527
           + +        DV+  G+++ 
Sbjct: 204 VVKREPYGKPVDVWGCGVILF 224

>pdb|2OZA|A Chain A, Structure Of P38alpha Complex Length = 356

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/100 (37%), Positives = 55/100 (55%), Gaps = 8/100 (8%)
Query: 436 KILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYL-NA--KLGDFGLAKIYEHGANPQ 492
           +I+  I +++ YLH   +  + HRDVKP N+L  +   NA  KL DFG AK  E  ++  
Sbjct: 121 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK--ETTSHNS 175
Query: 493 TTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACG 532
            T    T  Y+APE+    K   S D++S G++M  + CG
Sbjct: 176 LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 215

>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands Length = 334

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 37/100 (37%), Positives = 55/100 (55%), Gaps = 8/100 (8%)
Query: 436 KILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYL-NA--KLGDFGLAKIYEHGANPQ 492
           +I+  I +++ YLH   +  + HRDVKP N+L  +   NA  KL DFG AK  E  ++  
Sbjct: 135 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK--ETTSHNS 189
Query: 493 TTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACG 532
            T    T  Y+APE+    K   S D++S G++M  + CG
Sbjct: 190 LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 229

>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With A Peptide Inhibitor And Detergent Length = 350

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 51/204 (25%), Positives = 84/204 (41%), Gaps = 15/204 (7%)
Query: 332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRN--- 388
           F     +G+G FGRV        G   A+K +       +K+    +     L+  N   
Sbjct: 43  FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYL 448
           LV+L    +    L +V +YV  G                  +         I  +  YL
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARF-----YAAQIVLTFEYL 157
Query: 449 HEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELT 508
           H   +  +++RD+KP N+L+D     ++ DFG AK        +T  + GT  YLAPE+ 
Sbjct: 158 H---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEII 210
Query: 509 RTGKATTSTDVYSYGILMLEVACG 532
            +     + D ++ G+L+ E+A G
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp- Dependent Protein Kinase Complexed With A Substrate Peptide, Adp And Detergent Length = 350

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 51/204 (25%), Positives = 84/204 (41%), Gaps = 15/204 (7%)
Query: 332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRN--- 388
           F     +G+G FGRV        G   A+K +       +K+    +     L+  N   
Sbjct: 43  FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYL 448
           LV+L    +    L +V +YV  G                  +         I  +  YL
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYL 157
Query: 449 HEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELT 508
           H   +  +++RD+KP N+L+D     ++ DFG AK        +T  + GT  YLAPE+ 
Sbjct: 158 H---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEII 210
Query: 509 RTGKATTSTDVYSYGILMLEVACG 532
            +     + D ++ G+L+ E+A G
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And Regulatory (Ri{alpha}) Subunits Of Pka Length = 350

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 51/204 (25%), Positives = 84/204 (41%), Gaps = 15/204 (7%)
Query: 332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRN--- 388
           F     +G+G FGRV        G   A+K +       +K+    +     L+  N   
Sbjct: 43  FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYL 448
           LV+L    +    L +V +YV  G                  +         I  +  YL
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYL 157
Query: 449 HEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELT 508
           H   +  +++RD+KP N+L+D     ++ DFG AK        +T  + GT  YLAPE+ 
Sbjct: 158 H---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLAGTPEYLAPEII 210
Query: 509 RTGKATTSTDVYSYGILMLEVACG 532
            +     + D ++ G+L+ E+A G
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 51/204 (25%), Positives = 84/204 (41%), Gaps = 15/204 (7%)
Query: 332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRN--- 388
           F     +G+G FGRV        G   A+K +       +K+    +     L+  N   
Sbjct: 43  FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYL 448
           LV+L    +    L +V +YV  G                  +         I  +  YL
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYL 157
Query: 449 HEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELT 508
           H   +  +++RD+KP N+L+D     ++ DFG AK        +T  + GT  YLAPE+ 
Sbjct: 158 H---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEII 210
Query: 509 RTGKATTSTDVYSYGILMLEVACG 532
            +     + D ++ G+L+ E+A G
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of Camp- Dependent Protein Kinase In Complex With Sp20 And Amp-Pnp Length = 350

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 85/204 (41%), Gaps = 15/204 (7%)
Query: 332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRN--- 388
           F     +G+G FGRV        G   A+K +       +K+    +     L+  N   
Sbjct: 43  FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYL 448
           LV+L    +    L +V +YV  G                  +         I  +  YL
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-----YAAQIVLTFEYL 157
Query: 449 HEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELT 508
           H   +  +++RD+KP N+L+D     ++ DFG AK        +T  + GT  YLAPE+ 
Sbjct: 158 H---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEII 210
Query: 509 RTGKATTSTDVYSYGILMLEVACG 532
            +     + D ++ G+L+ E+A G
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To Hydroxyfasudil Length = 351

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 51/204 (25%), Positives = 84/204 (41%), Gaps = 15/204 (7%)
Query: 332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRN--- 388
           F     +G+G FGRV        G   A+K +       +K+    +     L+  N   
Sbjct: 44  FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYL 448
           LV+L    +    L +V +YV  G                  +         I  +  YL
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYL 158
Query: 449 HEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELT 508
           H   +  +++RD+KP N+L+D     ++ DFG AK        +T  + GT  YLAPE+ 
Sbjct: 159 H---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEII 211
Query: 509 RTGKATTSTDVYSYGILMLEVACG 532
            +     + D ++ G+L+ E+A G
Sbjct: 212 LSKGYNKAVDWWALGVLIYEMAAG 235

>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With The Peptide Inhibitor Pki(5-24) And Adenosine Length = 350

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 51/204 (25%), Positives = 84/204 (41%), Gaps = 15/204 (7%)
Query: 332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRN--- 388
           F     +G+G FGRV        G   A+K +       +K+    +     L+  N   
Sbjct: 43  FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYL 448
           LV+L    +    L +V +YV  G                  +         I  +  YL
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYL 157
Query: 449 HEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELT 508
           H   +  +++RD+KP N+L+D     ++ DFG AK        +T  + GT  YLAPE+ 
Sbjct: 158 H---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEII 210
Query: 509 RTGKATTSTDVYSYGILMLEVACG 532
            +     + D ++ G+L+ E+A G
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 51/204 (25%), Positives = 84/204 (41%), Gaps = 15/204 (7%)
Query: 332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRN--- 388
           F     +G+G FGRV        G   A+K +       +K+    +     L+  N   
Sbjct: 43  FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYL 448
           LV+L    +    L +V +YV  G                  +         I  +  YL
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYL 157
Query: 449 HEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELT 508
           H   +  +++RD+KP N+L+D     ++ DFG AK        +T  + GT  YLAPE+ 
Sbjct: 158 H---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEII 210
Query: 509 RTGKATTSTDVYSYGILMLEVACG 532
            +     + D ++ G+L+ E+A G
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of Camp-Dependent Protein Kinase And Adenosine Further Defines Conformational Flexibility Length = 350

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 51/204 (25%), Positives = 84/204 (41%), Gaps = 15/204 (7%)
Query: 332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRN--- 388
           F     +G+G FGRV        G   A+K +       +K+    +     L+  N   
Sbjct: 43  FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYL 448
           LV+L    +    L +V +YV  G                  +         I  +  YL
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYL 157
Query: 449 HEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELT 508
           H   +  +++RD+KP N+L+D     ++ DFG AK        +T  + GT  YLAPE+ 
Sbjct: 158 H---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEII 210
Query: 509 RTGKATTSTDVYSYGILMLEVACG 532
            +     + D ++ G+L+ E+A G
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|1RJB|A Chain A, Crystal Structure Of Flt3 Length = 344

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 53/224 (23%), Positives = 94/224 (41%), Gaps = 37/224 (16%)
Query: 336 NLVGSGGFGRV-----YRGLMPSLGLEVAIKRIGHNSQQGMKE-FVAEIMSMGRL-RHRN 388
            ++GSG FG+V     Y      + ++VA+K +   +    +E  ++E+  M +L  H N
Sbjct: 51  KVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHEN 110
Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXX------------------T 430
           +V L G C     + L+++Y   G                                   T
Sbjct: 111 IVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLT 170
Query: 431 WDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGAN 490
           ++        +A+ + +L     +  VHRD+   N+L+      K+ DFGLA+     +N
Sbjct: 171 FEDLLCFAYQVAKGMEFLE---FKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSN 227
Query: 491 PQTTHIVG-----TLGYLAPELTRTGKATTSTDVYSYGILMLEV 529
               ++V       + ++APE    G  T  +DV+SYGIL+ E+
Sbjct: 228 ----YVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEI 267

>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1 Length = 415

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 457 VHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRT-----G 511
           VHRD+KP N+LLD   + +L DFG           Q++  VGT  Y++PE+ +      G
Sbjct: 197 VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMG 256
Query: 512 KATTSTDVYSYGILMLEVACGR 533
           K     D +S G+ M E+  G 
Sbjct: 257 KYGPECDWWSLGVCMYEMLYGE 278

>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1 Length = 290

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 67/270 (24%), Positives = 113/270 (41%), Gaps = 57/270 (21%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAI-----KRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQL 392
           +G G F  VY+GL     +EVA      +++  + +Q  KE   E   +  L+H N+V+ 
Sbjct: 34  IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKE---EAEXLKGLQHPNIVRF 90
Query: 393 H-GW---CRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKI---------LI 439
           +  W    + +  ++LV +   +G+                T+ +R+K+           
Sbjct: 91  YDSWESTVKGKKCIVLVTELXTSGT--------------LKTYLKRFKVXKIKVLRSWCR 136
Query: 440 GIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNA-KLGDFGLAKIYEHGANPQTTHIVG 498
            I + L +LH      ++HRD+K  NI +     + K+GD GLA +           ++G
Sbjct: 137 QILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASF---AKAVIG 192
Query: 499 TLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAEL------------- 545
           T  + APE     K   S DVY++G   LE A         + AA++             
Sbjct: 193 TPEFXAPEXYEE-KYDESVDVYAFGXCXLEXATSEYPYSECQNAAQIYRRVTSGVKPASF 251
Query: 546 --LLVDWVKELHLEGEITQAIDQTLDYYDL 573
             + +  VKE+ +EG I Q  D+     DL
Sbjct: 252 DKVAIPEVKEI-IEGCIRQNKDERYSIKDL 280

>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of Camp-Dependent Protein Kinase Length = 345

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 85/204 (41%), Gaps = 15/204 (7%)
Query: 332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRN--- 388
           F     +G+G FGRV        G   A+K +       +K+    +     L+  N   
Sbjct: 38  FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 97
Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYL 448
           LV+L    +    L +V +YV  G                  +         I  +  YL
Sbjct: 98  LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-----YAAQIVLTFEYL 152
Query: 449 HEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELT 508
           H   +  +++RD+KP N+L+D     ++ DFG AK        +T  + GT  YLAPE+ 
Sbjct: 153 H---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEII 205
Query: 509 RTGKATTSTDVYSYGILMLEVACG 532
            +     + D ++ G+L+ E+A G
Sbjct: 206 LSKGYNKAVDWWALGVLIYEMAAG 229

>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 85/204 (41%), Gaps = 15/204 (7%)
Query: 332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRN--- 388
           F     +G+G FGRV        G   A+K +       +K+    +     L+  N   
Sbjct: 43  FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYL 448
           LV+L    +    L +V +YV  G                  +         I  +  YL
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-----YAAQIVLTFEYL 157
Query: 449 HEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELT 508
           H   +  +++RD+KP N+L+D     ++ DFG AK        +T  + GT  YLAPE+ 
Sbjct: 158 H---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEII 210
Query: 509 RTGKATTSTDVYSYGILMLEVACG 532
            +     + D ++ G+L+ E+A G
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory Subunit Of Protein Kinase A That Represents The Inhibited State Length = 350

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 85/204 (41%), Gaps = 15/204 (7%)
Query: 332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRN--- 388
           F     +G+G FGRV        G   A+K +       +K+    +     L+  N   
Sbjct: 43  FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYL 448
           LV+L    +    L +V +YV  G                  +         I  +  YL
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-----YAAQIVLTFEYL 157
Query: 449 HEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELT 508
           H   +  +++RD+KP N+L+D     ++ DFG AK        +T  + GT  YLAPE+ 
Sbjct: 158 H---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEII 210
Query: 509 RTGKATTSTDVYSYGILMLEVACG 532
            +     + D ++ G+L+ E+A G
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|2PEL|A Chain A, Peanut Lectin Length = 236

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 63/247 (25%), Positives = 101/247 (40%), Gaps = 27/247 (10%)
Query: 6   ADTTSFLYNGFLHAN--LSLEGAAYISTSGILTVTNKSE-GLIGHALYPNPLRFKTSNKS 62
           A+T SF +N F   N  ++ +G   + ++G + +TN ++   +G  LY  P+R  +S   
Sbjct: 1   AETVSFNFNSFSEGNPAINFQGDVTVLSNGNIQLTNLNKVNSVGRVLYAMPVRIWSSATG 60
Query: 63  VAIDFRTNFVFSILPKYPDLGGQGLAFIII--STNRPENCLANQFLGLPNITMSSSTKFS 120
               F T+F F +          G+ F I    T  P   +    LG+      S TK +
Sbjct: 61  NVASFLTSFSFEMKDIKDYDPADGIIFFIAPEDTQIPAGSIGGGTLGV------SDTKGA 114
Query: 121 TRMLAVEFDIIQNTELIDINDNHVGIDXXXXXXXXXXXXXYYSGNNHRIPILLRSGDPIQ 180
              + VEFD   N+E  D   +HVGID                     +P    SG  ++
Sbjct: 115 GHFVGVEFDTYSNSEYNDPPTDHVGIDVNSVDSV------------KTVPWNSVSGAVVK 162
Query: 181 AWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLITAS-HN 239
             V Y S    ++V++            I+  +DL + + E +  GFSAS  L     H 
Sbjct: 163 VTVIYDSSTKTLSVAVTN---DNGDITTIAQVVDLKAKLPERVKFGFSASGSLGGRQIHL 219
Query: 240 VHGWSIS 246
           +  WS +
Sbjct: 220 IRSWSFT 226

>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil Length = 433

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 457 VHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRT-----G 511
           VHRD+KP N+LLD   + +L DFG           Q++  VGT  Y++PE+ +      G
Sbjct: 213 VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMG 272
Query: 512 KATTSTDVYSYGILMLEVACGR 533
           K     D +S G+ M E+  G 
Sbjct: 273 KYGPECDWWSLGVCMYEMLYGE 294

>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With H89 Protein Kinase Inhibitor N-[2- (4-Bromocinnamylamino)ethyl]-5-Isoquinoline Length = 350

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 50/198 (25%), Positives = 83/198 (41%), Gaps = 15/198 (7%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRN---LVQLHG 394
           +G+G FGRV        G   A+K +       +K+    +     L+  N   LV+L  
Sbjct: 49  LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 395 WCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQ 454
             +    L +V +YV  G                  +         I  +  YLH   + 
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLH---SL 160
Query: 455 RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKAT 514
            +++RD+KP N+L+D     ++ DFG AK        +T  + GT  YLAPE+  +    
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 515 TSTDVYSYGILMLEVACG 532
            + D ++ G+L+ E+A G
Sbjct: 217 KAVDWWALGVLIYEMAAG 234

>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase Catalytic Subunit Length = 350

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 51/204 (25%), Positives = 84/204 (41%), Gaps = 15/204 (7%)
Query: 332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRN--- 388
           F     +G+G FGRV        G   A+K +       +K+    +     L+  N   
Sbjct: 43  FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYL 448
           LV+L    +    L +V +YV  G                  +         I  +  YL
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYL 157
Query: 449 HEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELT 508
           H   +  +++RD+KP N+L+D     ++ DFG AK        +T  + GT  YLAPE+ 
Sbjct: 158 H---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLXGTPEYLAPEII 210
Query: 509 RTGKATTSTDVYSYGILMLEVACG 532
            +     + D ++ G+L+ E+A G
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 93/211 (44%), Gaps = 15/211 (7%)
Query: 327 SVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGH--NSQQGMKEFVAEIMSMGRL 384
           +V K +     +GSG  G V       L   VAIK++     +Q   K    E++ M  +
Sbjct: 21  TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVV 80
Query: 385 RHRNLVQLHGWCRKQ---DELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGI 441
            H+N++ L      Q   +E   VY  +                    ++   Y++L+GI
Sbjct: 81  NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSY-LLYQMLVGI 139
Query: 442 AQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLG 501
                +LH   +  ++HRD+KPSNI++ +    K+ DFGLA+    G +   T  V T  
Sbjct: 140 K----HLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLART--AGTSFMMTPYVVTRY 190
Query: 502 YLAPELTRTGKATTSTDVYSYGILMLEVACG 532
           Y APE+        + D++S G +M E+  G
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221

>pdb|1BZW|A Chain A, Peanut Lectin Complexed With C-Lactose Length = 232

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 63/247 (25%), Positives = 101/247 (40%), Gaps = 27/247 (10%)
Query: 6   ADTTSFLYNGFLHAN--LSLEGAAYISTSGILTVTNKSE-GLIGHALYPNPLRFKTSNKS 62
           A+T SF +N F   N  ++ +G   + ++G + +TN ++   +G  LY  P+R  +S   
Sbjct: 1   AETVSFNFNSFSEGNPAINFQGDVTVLSNGNIQLTNLNKVNSVGRVLYAMPVRIWSSATG 60
Query: 63  VAIDFRTNFVFSILPKYPDLGGQGLAFIII--STNRPENCLANQFLGLPNITMSSSTKFS 120
               F T+F F +          G+ F I    T  P   +    LG+      S TK +
Sbjct: 61  NVASFLTSFSFEMKDIKDYDPADGIIFFIAPEDTQIPAGSIGGGTLGV------SDTKGA 114
Query: 121 TRMLAVEFDIIQNTELIDINDNHVGIDXXXXXXXXXXXXXYYSGNNHRIPILLRSGDPIQ 180
              + VEFD   N+E  D   +HVGID                     +P    SG  ++
Sbjct: 115 GHFVGVEFDTYSNSEYNDPPTDHVGIDVNSVDSV------------KTVPWNSVSGAVVK 162
Query: 181 AWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLITAS-HN 239
             V Y S    ++V++            I+  +DL + + E +  GFSAS  L     H 
Sbjct: 163 VTVIYDSSTKTLSVAVTN---DNGDITTIAQVVDLKAKLPERVKFGFSASGSLGGRQIHL 219
Query: 240 VHGWSIS 246
           +  WS +
Sbjct: 220 IRSWSFT 226

>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Length = 370

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 15/212 (7%)
Query: 327 SVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGH--NSQQGMKEFVAEIMSMGRL 384
           +V K +     +GSG  G V       L   VAIK++     +Q   K    E++ M  +
Sbjct: 21  TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCV 80
Query: 385 RHRNLVQLHGWCRKQ---DELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGI 441
            H+N++ L      Q   +E   VY  +                    ++   Y++L GI
Sbjct: 81  NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY-LLYQMLCGI 139
Query: 442 AQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLG 501
                +LH   +  ++HRD+KPSNI++ +    K+ DFGLA+    G +      V T  
Sbjct: 140 K----HLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMEPEVVTRY 190
Query: 502 YLAPELTRTGKATTSTDVYSYGILMLEVACGR 533
           Y APE+        + D++S G +M E+ C +
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMVCHK 222

>pdb|1UZY|A Chain A, Erythrina Crystagalli Lectin Length = 242

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 67/252 (26%), Positives = 101/252 (40%), Gaps = 33/252 (13%)
Query: 7   DTTSFLYNGFLHAN--LSLEGAAYISTSGILTVTNKSEGLI------GHALYPNPLRFKT 58
           +T SF ++ F   N  L+L+GAA I+ SG+L +T  ++  +      G  LY  P+    
Sbjct: 2   ETISFSFSEFEPGNNDLTLQGAAIITQSGVLQLTKINQNGMPAWDSTGRTLYTKPVHIWD 61
Query: 59  SNKSVAIDFRTNFVFSILPKYP-DLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSST 117
                   F T F FSI   Y   L   GL F +     P      Q  G   +  +S  
Sbjct: 62  MTTGTVASFETRFSFSIEQPYTRPLPADGLVFFM----GPTKSKPAQGYGYLGVFNNSKQ 117
Query: 118 KFSTRMLAVEFDIIQNTELIDINDNHVGIDXXXXXXXXXXXXXYYSGNNHRIPILLRSGD 177
             S + LAVEFD   N         H+GID                      P  L +G 
Sbjct: 118 DNSYQTLAVEFDTFSN-PWDPPQVPHIGIDVNSIRSIKTQ------------PFQLDNGQ 164
Query: 178 PIQAWVDY-SSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGL--- 233
                + Y +S ++L+ V + P      Y   I+  +D+  V+ E++  G S +TG    
Sbjct: 165 VANVVIKYDASSKILLAVLVYP-SSGAIYT--IAEIVDVKQVLPEWVDVGLSGATGAQRD 221
Query: 234 ITASHNVHGWSI 245
              +H+V+ WS 
Sbjct: 222 AAETHDVYSWSF 233

>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 6 (Mapk6) Length = 320

Iteration: 1
 Score = 52.8 bits (125), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 55/218 (25%), Positives = 96/218 (44%), Gaps = 36/218 (16%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLH---- 393
           +G GG G V+  +       VAIK+I     Q +K  + EI  + RL H N+V++     
Sbjct: 19  LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILG 78
Query: 394 ----------GWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQ 443
                     G   + + + +V +Y+                         Y++L G+  
Sbjct: 79  PSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEHARLFM---YQLLRGLK- 134
Query: 444 SLLYLHEECNQRVVHRDVKPSNILLDTY-LNAKLGDFGLAKIYEHGANPQTTHI------ 496
              Y+H   +  V+HRD+KP+N+ ++T  L  K+GDFGLA+I     +P  +H       
Sbjct: 135 ---YIH---SANVLHRDLKPANLFINTEDLVLKIGDFGLARI----MDPHYSHKGHLSEG 184
Query: 497 VGTLGYLAPELTRT-GKATTSTDVYSYGILMLEVACGR 533
           + T  Y +P L  +    T + D+++ G +  E+  G+
Sbjct: 185 LVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGK 222

>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent Protein Kinase With Unphosphorylated Turn Motif Length = 371

Iteration: 1
 Score = 52.8 bits (125), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 85/204 (41%), Gaps = 15/204 (7%)
Query: 332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRN--- 388
           F     +G+G FGRV        G   A+K +       +K+    +     L+  N   
Sbjct: 64  FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 123
Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYL 448
           LV+L    +    L +V +YV  G                  +         I  +  YL
Sbjct: 124 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-----YAAQIVLTFEYL 178
Query: 449 HEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELT 508
           H   +  +++RD+KP N+L+D     ++ DFG AK        +T  + GT  YLAPE+ 
Sbjct: 179 H---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEII 231
Query: 509 RTGKATTSTDVYSYGILMLEVACG 532
            +     + D ++ G+L+ E+A G
Sbjct: 232 LSKGYNKAVDWWALGVLIYEMAAG 255

>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor, Sr- 3451 Length = 353

Iteration: 1
 Score = 52.8 bits (125), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 91/209 (43%), Gaps = 15/209 (7%)
Query: 327 SVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGH--NSQQGMKEFVAEIMSMGRL 384
           +V K +     +GSG  G V       L   VAIK++     +Q   K    E++ M  +
Sbjct: 21  TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXV 80
Query: 385 RHRNLVQLHGWCRKQ---DELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGI 441
            H+N++ L      Q   +E   VY  +                    ++   Y++L GI
Sbjct: 81  NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSY-LLYQMLCGI 139
Query: 442 AQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLG 501
                +LH   +  ++HRD+KPSNI++ +    K+ DFGLA+    G +   T  V T  
Sbjct: 140 K----HLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLART--AGTSFMMTPYVVTRY 190
Query: 502 YLAPELTRTGKATTSTDVYSYGILMLEVA 530
           Y APE+        + D++S G +M E+ 
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMV 219

>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2 (Erbb2). Length = 338

Iteration: 1
 Score = 52.8 bits (125), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 60/222 (27%), Positives = 100/222 (45%), Gaps = 29/222 (13%)
Query: 318 RRFKYAELASVTKGFGEQNLVGSGGFGRVYRGL-MP---SLGLEVAIKRIGHN-SQQGMK 372
           R  K  EL  V        ++GSG FG VY+G+ +P   ++ + VAIK +  N S +  K
Sbjct: 12  RILKETELRKV-------KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANK 64
Query: 373 EFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXX--XXXXXT 430
           E + E   M  +    + +L G C     + LV   +P G                    
Sbjct: 65  EILDEAYVMAGVGSPYVSRLLGICLTS-TVQLVTQLMPYGCLLDHVRENRGRLGSQDLLN 123
Query: 431 WDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGAN 490
           W       + IA+ + YL    + R+VHRD+   N+L+ +  + K+ DFGLA++ +   +
Sbjct: 124 W------CMQIAKGMSYLE---DVRLVHRDLAARNVLVKSPNHVKITDFGLARLLD--ID 172
Query: 491 PQTTHIVG---TLGYLAPELTRTGKATTSTDVYSYGILMLEV 529
               H  G    + ++A E     + T  +DV+SYG+ + E+
Sbjct: 173 ETEYHADGGKVPIKWMALESILRRRFTHQSDVWSYGVTVWEL 214

>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk Inhibitor For The Prevention Of Ischemia-Reperfusion Injury Length = 464

Iteration: 1
 Score = 52.8 bits (125), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 91/208 (43%), Gaps = 15/208 (7%)
Query: 327 SVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGH--NSQQGMKEFVAEIMSMGRL 384
           +V K +     +GSG  G V       L   VAIK++     +Q   K    E++ M  +
Sbjct: 59  TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV 118
Query: 385 RHRNLVQLHGWCRKQ---DELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGI 441
            H+N++ L      Q   +E   VY  +                    ++   Y++L GI
Sbjct: 119 NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSY-LLYQMLCGI 177
Query: 442 AQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLG 501
                +LH   +  ++HRD+KPSNI++ +    K+ DFGLA+    G +   T  V T  
Sbjct: 178 K----HLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRY 228
Query: 502 YLAPELTRTGKATTSTDVYSYGILMLEV 529
           Y APE+        + D++S G +M E+
Sbjct: 229 YRAPEVILGMGYKENVDIWSVGCIMGEM 256

>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation Length = 293

Iteration: 1
 Score = 52.8 bits (125), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 89/206 (43%), Gaps = 20/206 (9%)
Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFV------AEIMSMGRLRH--RN 388
           L+GSGGFG VY G+  S  L VAIK +  +      E         E++ + ++      
Sbjct: 15  LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 74
Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYL 448
           +++L  W  + D  +L+ + +                         +++L    +++ + 
Sbjct: 75  VIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQVL----EAVRHC 130
Query: 449 HEECNQRVVHRDVKPSNILLDTYLNA-KLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
           H   N  V+HRD+K  NIL+D      KL DFG   + +   +   T   GT  Y  PE 
Sbjct: 131 H---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEW 184
Query: 508 TRTGK-ATTSTDVYSYGILMLEVACG 532
            R  +    S  V+S GIL+ ++ CG
Sbjct: 185 IRYHRYHGRSAAVWSLGILLYDMVCG 210

>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Length = 355

Iteration: 1
 Score = 52.8 bits (125), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 92/209 (44%), Gaps = 15/209 (7%)
Query: 327 SVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGH--NSQQGMKEFVAEIMSMGRL 384
           +V K +     +GSG  G V       L   VAIK++     +Q   K    E++ M  +
Sbjct: 21  TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXV 80
Query: 385 RHRNLVQLHGWCRKQ---DELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGI 441
            H+N++ L      Q   +E   VY  +                    ++   Y++L GI
Sbjct: 81  NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSY-LLYQMLCGI 139
Query: 442 AQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLG 501
                +LH   +  ++HRD+KPSNI++ +    K+ DFGLA+    G +   T  V T  
Sbjct: 140 K----HLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLART--AGTSFMMTPYVVTRY 190
Query: 502 YLAPELTRTGKATTSTDVYSYGILMLEVA 530
           Y APE+        + D++S G +M E+ 
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMV 219

>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma Length = 367

Iteration: 1
 Score = 52.8 bits (125), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 53/202 (26%), Positives = 88/202 (43%), Gaps = 17/202 (8%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGM--KEFVAEIMSMGRLRHRNLVQLHGW 395
           VGSG +G V   +    G +VAIK++    Q  +  K    E+  +  +RH N++ L   
Sbjct: 33  VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDV 92
Query: 396 CRKQDELLLVYDY---VPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEEC 452
               + L    D+   +P                        Y++L G    L Y+H   
Sbjct: 93  FTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKG----LRYIHAAG 148
Query: 453 NQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTG- 511
              ++HRD+KP N+ ++     K+ DFGLA+     A+ +    V T  Y APE+     
Sbjct: 149 ---IIHRDLKPGNLAVNEDCELKILDFGLAR----QADSEMXGXVVTRWYRAPEVILNWM 201
Query: 512 KATTSTDVYSYGILMLEVACGR 533
           + T + D++S G +M E+  G+
Sbjct: 202 RYTQTVDIWSVGCIMAEMITGK 223

>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory Dimer Length = 316

Iteration: 1
 Score = 52.8 bits (125), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 55/106 (51%), Gaps = 16/106 (15%)
Query: 436 KILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGL--------AKIYEH 487
           KI + I ++L +LH + +  V+HRDVKPSN+L++     K  DFG+        AK  + 
Sbjct: 140 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDA 197
Query: 488 GANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGR 533
           G  P           + PEL + G +  S D++S GI  +E+A  R
Sbjct: 198 GCKPYXAP-----ERINPELNQKGYSVKS-DIWSLGITXIELAILR 237

>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With Mgamp-Pnp Length = 423

Iteration: 1
 Score = 52.8 bits (125), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 91/208 (43%), Gaps = 15/208 (7%)
Query: 327 SVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGH--NSQQGMKEFVAEIMSMGRL 384
           +V K +     +GSG  G V       L   VAIK++     +Q   K    E++ M  +
Sbjct: 59  TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV 118
Query: 385 RHRNLVQLHGWCRKQ---DELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGI 441
            H+N++ L      Q   +E   VY  +                    ++   Y++L GI
Sbjct: 119 NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSY-LLYQMLCGI 177
Query: 442 AQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLG 501
                +LH   +  ++HRD+KPSNI++ +    K+ DFGLA+    G +   T  V T  
Sbjct: 178 K----HLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRY 228
Query: 502 YLAPELTRTGKATTSTDVYSYGILMLEV 529
           Y APE+        + D++S G +M E+
Sbjct: 229 YRAPEVILGMGYKENVDIWSVGCIMGEM 256

>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein Kinase With Unphosphorylated Activation Loop Length = 371

Iteration: 1
 Score = 52.4 bits (124), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 53/204 (25%), Positives = 86/204 (42%), Gaps = 15/204 (7%)
Query: 332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRN--- 388
           F     +G+G FGRV        G   A+K +       +K+    +     L+  N   
Sbjct: 64  FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 123
Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYL 448
           LV+L    +    L +V +YV  G                  +         I  +  YL
Sbjct: 124 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYL 178
Query: 449 HEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELT 508
           H   +  +++RD+KP N+L+D     ++ DFG AK  + GA   T  + GT  YLAPE+ 
Sbjct: 179 H---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GA---TWTLCGTPEYLAPEII 231
Query: 509 RTGKATTSTDVYSYGILMLEVACG 532
            +     + D ++ G+L+ E+A G
Sbjct: 232 LSKGYNKAVDWWALGVLIYEMAAG 255

>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3 Length = 356

Iteration: 1
 Score = 52.4 bits (124), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 91/209 (43%), Gaps = 15/209 (7%)
Query: 327 SVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGH--NSQQGMKEFVAEIMSMGRL 384
           +V K +     +GSG  G V       L   VAIK++     +Q   K    E++ M  +
Sbjct: 15  TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV 74
Query: 385 RHRNLVQLHGWCRKQ---DELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGI 441
            H+N++ L      Q   +E   VY  +                    ++   Y++L GI
Sbjct: 75  NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSY-LLYQMLCGI 133
Query: 442 AQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLG 501
                +LH   +  ++HRD+KPSNI++ +    K+ DFGLA+    G +   T  V T  
Sbjct: 134 K----HLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRY 184
Query: 502 YLAPELTRTGKATTSTDVYSYGILMLEVA 530
           Y APE+        + D++S G +M E+ 
Sbjct: 185 YRAPEVILGMGYKENVDIWSVGCIMGEMV 213

>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole- Pyrimidine Inhibitor Length = 364

Iteration: 1
 Score = 52.4 bits (124), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 91/208 (43%), Gaps = 15/208 (7%)
Query: 327 SVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGH--NSQQGMKEFVAEIMSMGRL 384
           +V K +     +GSG  G V       L   VAIK++     +Q   K    E++ M  +
Sbjct: 22  TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV 81
Query: 385 RHRNLVQLHGWCRKQ---DELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGI 441
            H+N++ L      Q   +E   VY  +                    ++   Y++L GI
Sbjct: 82  NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSY-LLYQMLCGI 140
Query: 442 AQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLG 501
                +LH   +  ++HRD+KPSNI++ +    K+ DFGLA+    G +   T  V T  
Sbjct: 141 K----HLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRY 191
Query: 502 YLAPELTRTGKATTSTDVYSYGILMLEV 529
           Y APE+        + D++S G +M E+
Sbjct: 192 YRAPEVILGMGYKENVDIWSVGCIMGEM 219

>pdb|3N35|A Chain A, Erythrina Corallodendron Lectin Mutant (Y106g) With N- Acetylgalactosamine Length = 242

Iteration: 1
 Score = 52.4 bits (124), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 62/251 (24%), Positives = 102/251 (40%), Gaps = 31/251 (12%)
Query: 7   DTTSFLYNGFL--HANLSLEGAAYISTSGILTVTNKSEGLI------GHALYPNPLRFKT 58
           +T SF ++ F   + NL+L+GA+ I+ SG+L +T  ++  +      G  LY  P+    
Sbjct: 2   ETISFSFSEFEPGNDNLTLQGASLITQSGVLQLTKINQNGMPAWDSTGRTLYAKPVHIWD 61
Query: 59  SNKSVAIDFRTNFVFSILPKYP-DLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSST 117
                   F T F FSI   Y   L   GL F +  T + +      +LG+ N   +S  
Sbjct: 62  MTTGTVASFETRFSFSIEQPYTRPLPADGLVFFMGPT-KSKPAQGGGYLGIFN---NSKQ 117
Query: 118 KFSTRMLAVEFDIIQNTELIDINDNHVGIDXXXXXXXXXXXXXYYSGNNHRIPILLRSGD 177
             S + L VEFD   N +       H+GID                      P  L +G 
Sbjct: 118 DNSYQTLGVEFDTFSN-QWDPPQVPHIGIDVNSIRSIKTQ------------PFQLDNGQ 164
Query: 178 PIQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGL---I 234
                + Y +   +++  +        Y   I+  +D+  V+ E++  G S +TG     
Sbjct: 165 VANVVIKYDASSKILHAVLVYPSSGAIYT--IAEIVDVKQVLPEWVDVGLSGATGAQRDA 222
Query: 235 TASHNVHGWSI 245
             +H+V+ WS 
Sbjct: 223 AETHDVYSWSF 233

>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious Tri-Substituted Thiophene Based Jnk Inhibitor Length = 363

Iteration: 1
 Score = 52.4 bits (124), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 91/208 (43%), Gaps = 15/208 (7%)
Query: 327 SVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGH--NSQQGMKEFVAEIMSMGRL 384
           +V K +     +GSG  G V       L   VAIK++     +Q   K    E++ M  +
Sbjct: 21  TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV 80
Query: 385 RHRNLVQLHGWCRKQ---DELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGI 441
            H+N++ L      Q   +E   VY  +                    ++   Y++L GI
Sbjct: 81  NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSY-LLYQMLCGI 139
Query: 442 AQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLG 501
                +LH   +  ++HRD+KPSNI++ +    K+ DFGLA+    G +   T  V T  
Sbjct: 140 K----HLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRY 190
Query: 502 YLAPELTRTGKATTSTDVYSYGILMLEV 529
           Y APE+        + D++S G +M E+
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEM 218

>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And Thiazole Based Inhibitors Of Jnk For The Treatment Of Neurodegenerative Diseases Length = 362

Iteration: 1
 Score = 52.4 bits (124), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 91/208 (43%), Gaps = 15/208 (7%)
Query: 327 SVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGH--NSQQGMKEFVAEIMSMGRL 384
           +V K +     +GSG  G V       L   VAIK++     +Q   K    E++ M  +
Sbjct: 20  TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV 79
Query: 385 RHRNLVQLHGWCRKQ---DELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGI 441
            H+N++ L      Q   +E   VY  +                    ++   Y++L GI
Sbjct: 80  NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSY-LLYQMLCGI 138
Query: 442 AQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLG 501
                +LH   +  ++HRD+KPSNI++ +    K+ DFGLA+    G +   T  V T  
Sbjct: 139 K----HLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRY 189
Query: 502 YLAPELTRTGKATTSTDVYSYGILMLEV 529
           Y APE+        + D++S G +M E+
Sbjct: 190 YRAPEVILGMGYKENVDIWSVGCIMGEM 217

>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3 Length = 355

Iteration: 1
 Score = 52.4 bits (124), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 91/209 (43%), Gaps = 15/209 (7%)
Query: 327 SVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGH--NSQQGMKEFVAEIMSMGRL 384
           +V K +     +GSG  G V       L   VAIK++     +Q   K    E++ M  +
Sbjct: 14  TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV 73
Query: 385 RHRNLVQLHGWCRKQ---DELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGI 441
            H+N++ L      Q   +E   VY  +                    ++   Y++L GI
Sbjct: 74  NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSY-LLYQMLCGI 132
Query: 442 AQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLG 501
                +LH   +  ++HRD+KPSNI++ +    K+ DFGLA+    G +   T  V T  
Sbjct: 133 K----HLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRY 183
Query: 502 YLAPELTRTGKATTSTDVYSYGILMLEVA 530
           Y APE+        + D++S G +M E+ 
Sbjct: 184 YRAPEVILGMGYKENVDIWSVGCIMGEMV 212

>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide Length = 356

Iteration: 1
 Score = 52.4 bits (124), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 91/208 (43%), Gaps = 15/208 (7%)
Query: 327 SVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGH--NSQQGMKEFVAEIMSMGRL 384
           +V K +     +GSG  G V       L   VAIK++     +Q   K    E++ M  +
Sbjct: 15  TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV 74
Query: 385 RHRNLVQLHGWCRKQ---DELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGI 441
            H+N++ L      Q   +E   VY  +                    ++   Y++L GI
Sbjct: 75  NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSY-LLYQMLCGI 133
Query: 442 AQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLG 501
                +LH   +  ++HRD+KPSNI++ +    K+ DFGLA+    G +   T  V T  
Sbjct: 134 K----HLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRY 184
Query: 502 YLAPELTRTGKATTSTDVYSYGILMLEV 529
           Y APE+        + D++S G +M E+
Sbjct: 185 YRAPEVILGMGYKENVDIWSVGCIMGEM 212

>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With N-{3-Cyano-6-[3-(1- Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2, 3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide Length = 364

Iteration: 1
 Score = 52.4 bits (124), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 91/208 (43%), Gaps = 15/208 (7%)
Query: 327 SVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGH--NSQQGMKEFVAEIMSMGRL 384
           +V K +     +GSG  G V       L   VAIK++     +Q   K    E++ M  +
Sbjct: 21  TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV 80
Query: 385 RHRNLVQLHGWCRKQ---DELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGI 441
            H+N++ L      Q   +E   VY  +                    ++   Y++L GI
Sbjct: 81  NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSY-LLYQMLCGI 139
Query: 442 AQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLG 501
                +LH   +  ++HRD+KPSNI++ +    K+ DFGLA+    G +   T  V T  
Sbjct: 140 K----HLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRY 190
Query: 502 YLAPELTRTGKATTSTDVYSYGILMLEV 529
           Y APE+        + D++S G +M E+
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEM 218

>pdb|1AX0|A Chain A, Erythrina Corallodendron Lectin In Complex With N-Actylgalactosamine Length = 239

Iteration: 1
 Score = 52.4 bits (124), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 97/251 (38%), Gaps = 31/251 (12%)
Query: 7   DTTSFLYNGFL--HANLSLEGAAYISTSGILTVTNKSEGLI------GHALYPNPLRFKT 58
           +T SF ++ F   + NL+L+GAA I+ SG+L +T  ++  +      G  LY  P+    
Sbjct: 2   ETISFSFSEFEPGNDNLTLQGAALITQSGVLQLTKINQNGMPAWDSTGRTLYAKPVHIWD 61
Query: 59  SNKSVAIDFRTNFVFSILPKYP-DLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSST 117
                   F T F FSI   Y   L   GL F +     P      Q  G   I  +S  
Sbjct: 62  MTTGTVASFETRFSFSIEQPYTRPLPADGLVFFM----GPTKSKPAQGYGYLGIFNNSKQ 117
Query: 118 KFSTRMLAVEFDIIQNTELIDINDNHVGIDXXXXXXXXXXXXXYYSGNNHRIPILLRSGD 177
             S + L VEFD   N         H+GID                      P  L +G 
Sbjct: 118 DNSYQTLGVEFDTFSN-PWDPPQVPHIGIDVNSIRSIKTQ------------PFQLDNGQ 164
Query: 178 PIQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGL---I 234
                + Y +   +++  +        Y   I+  +D+  V+ E++  G S +TG     
Sbjct: 165 VANVVIKYDASSKILHAVLVYPSSGAIYT--IAEIVDVKQVLPEWVDVGLSGATGAQRDA 222
Query: 235 TASHNVHGWSI 245
             +H+V+ WS 
Sbjct: 223 AETHDVYSWSF 233

>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3- Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide Length = 365

Iteration: 1
 Score = 52.4 bits (124), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 91/208 (43%), Gaps = 15/208 (7%)
Query: 327 SVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGH--NSQQGMKEFVAEIMSMGRL 384
           +V K +     +GSG  G V       L   VAIK++     +Q   K    E++ M  +
Sbjct: 22  TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV 81
Query: 385 RHRNLVQLHGWCRKQ---DELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGI 441
            H+N++ L      Q   +E   VY  +                    ++   Y++L GI
Sbjct: 82  NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSY-LLYQMLCGI 140
Query: 442 AQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLG 501
                +LH   +  ++HRD+KPSNI++ +    K+ DFGLA+    G +   T  V T  
Sbjct: 141 K----HLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRY 191
Query: 502 YLAPELTRTGKATTSTDVYSYGILMLEV 529
           Y APE+        + D++S G +M E+
Sbjct: 192 YRAPEVILGMGYKENVDIWSVGCIMGEM 219

>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737 Length = 364

Iteration: 1
 Score = 52.4 bits (124), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 92/208 (44%), Gaps = 15/208 (7%)
Query: 327 SVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGH--NSQQGMKEFVAEIMSMGRL 384
           +V K +     +GSG  G V       L   VAIK++     +Q   K    E++ M  +
Sbjct: 21  TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXV 80
Query: 385 RHRNLVQLHGWCRKQ---DELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGI 441
            H+N++ L      Q   +E   VY  +                    ++   Y++L GI
Sbjct: 81  NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSY-LLYQMLXGI 139
Query: 442 AQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLG 501
                +LH   +  ++HRD+KPSNI++ +    K+ DFGLA+    G +   T  V T  
Sbjct: 140 K----HLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLART--AGTSFMMTPYVVTRY 190
Query: 502 YLAPELTRTGKATTSTDVYSYGILMLEV 529
           Y APE+        + D++S G +M E+
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEM 218

>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine Length = 273

Iteration: 1
 Score = 52.4 bits (124), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 90/208 (43%), Gaps = 24/208 (11%)
Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFV------AEIMSMGRLR--HRN 388
           L+GSGGFG VY G+  S  L VAIK +  +      E         E++ + ++      
Sbjct: 11  LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYL 448
           +++L  W  + D  +L+ +                           +++L    +++ + 
Sbjct: 71  VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVL----EAVRHC 126
Query: 449 HEECNQRVVHRDVKPSNILLDTYLNA---KLGDFGLAKIYEHGANPQTTHIVGTLGYLAP 505
           H   N  V+HRD+K  NIL+D  LN    KL DFG   + +   +   T   GT  Y  P
Sbjct: 127 H---NXGVLHRDIKDENILID--LNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPP 178
Query: 506 ELTRTGK-ATTSTDVYSYGILMLEVACG 532
           E  R  +    S  V+S GIL+ ++ CG
Sbjct: 179 EWIRYHRYHGRSAAVWSLGILLYDMVCG 206

>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors Length = 370

Iteration: 1
 Score = 52.0 bits (123), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 15/212 (7%)
Query: 327 SVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGH--NSQQGMKEFVAEIMSMGRL 384
           +V K +     +GSG  G V       L   VAIK++     +Q   K    E++ M  +
Sbjct: 21  TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCV 80
Query: 385 RHRNLVQLHGWCRKQ---DELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGI 441
            H+N++ L      Q   +E   VY  +                    ++   Y++L GI
Sbjct: 81  NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY-LLYQMLCGI 139
Query: 442 AQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLG 501
                +LH   +  ++HRD+KPSNI++ +    K+ DFGLA+    G +      V T  
Sbjct: 140 K----HLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMEPEVVTRY 190
Query: 502 YLAPELTRTGKATTSTDVYSYGILMLEVACGR 533
           Y APE+        + D++S G +M E+ C +
Sbjct: 191 YRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 222

>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka C-Subunit:amp-Pnp:mg2+ Complex Length = 350

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/204 (24%), Positives = 84/204 (41%), Gaps = 15/204 (7%)
Query: 332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRN--- 388
           F     +G+G FGRV        G   A+K +       +K+    +     L+  N   
Sbjct: 43  FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYL 448
           LV+L    +    L +V +YV  G                  +         I  +  YL
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYL 157
Query: 449 HEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELT 508
           H   +  +++RD+KP N+++D     ++ DFG AK        +T  + GT  YLAPE+ 
Sbjct: 158 H---SLDLIYRDLKPENLIIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEII 210
Query: 509 RTGKATTSTDVYSYGILMLEVACG 532
            +     + D ++ G+L+ E+A G
Sbjct: 211 ISKGYNKAVDWWALGVLIYEMAAG 234

>pdb|1LTE|A Chain A, Structure Of A Legume Lectin With An Ordered N-Linked Carbohydrate In Complex With Lactose Length = 239

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 96/251 (38%), Gaps = 31/251 (12%)
Query: 7   DTTSFLYNGFL--HANLSLEGAAYISTSGILTVTNKSEGLI------GHALYPNPLRFKT 58
           +T SF ++ F   + NL+L+GA+ I+ SG+L +T  ++  +      G  LY  P+    
Sbjct: 2   ETISFSFSEFEPGNDNLTLQGASLITQSGVLQLTKINQNGMPAWDSTGRTLYAKPVHIWD 61
Query: 59  SNKSVAIDFRTNFVFSILPKYP-DLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSST 117
                   F T F FSI   Y   L   GL F +     P      Q  G   I   S  
Sbjct: 62  MTTGTVASFETRFSFSIEQPYTRPLPADGLVFFM----GPTKSKPAQGYGYLGIFNQSKQ 117
Query: 118 KFSTRMLAVEFDIIQNTELIDINDNHVGIDXXXXXXXXXXXXXYYSGNNHRIPILLRSGD 177
             S + L VEFD   N         H+GID                      P  L +G 
Sbjct: 118 DNSYQTLGVEFDTFSN-PWDPPQVPHIGIDVNSIRSIKTQ------------PFQLDNGQ 164
Query: 178 PIQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGL---I 234
                + Y +   L++  +        Y   I+  +D+  V+ E++  G S +TG     
Sbjct: 165 VANVVIKYDASSKLLHAVLVYPSSGAIYT--IAEIVDVKQVLPEWVDVGLSGATGAQRDA 222
Query: 235 TASHNVHGWSI 245
             +H+V+ WS 
Sbjct: 223 AETHDVYSWSF 233

>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent Protein Kinase Reveals Unexpected Apoenzyme Conformation Length = 350

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/204 (24%), Positives = 84/204 (41%), Gaps = 15/204 (7%)
Query: 332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRN--- 388
           F     +G+G FGRV        G   A+K +       +K+    +     L+  N   
Sbjct: 43  FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYL 448
           LV+L    +    L +V +YV  G                  +         I  +  YL
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYL 157
Query: 449 HEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELT 508
           H   +  +++RD+KP N+L+D     ++ DFG AK        +T  + GT  YLAPE+ 
Sbjct: 158 H---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEII 210
Query: 509 RTGKATTSTDVYSYGILMLEVACG 532
            +     + D ++ G+L+ ++A G
Sbjct: 211 LSKGYNKAVDWWALGVLIYQMAAG 234

>pdb|1BJQ|A Chain A, The Dolichos Biflorus Seed Lectin In Complex With Adenine Length = 253

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 58/249 (23%), Positives = 101/249 (40%), Gaps = 27/249 (10%)
Query: 6   ADTTSFLYNGFLHANLSLEGAAYISTSGILTVTNKSEGL-----IGHALYPNPLRFKTSN 60
           A+  SF +  F   +  L+G A +S+  +     K  G+     +G A Y +P++    +
Sbjct: 1   ANIQSFSFKNFNSPSFILQGDATVSSGKLQLTKVKENGIPTPSSLGRAFYSSPIQIYDKS 60
Query: 61  KSVAIDFRTNFVFSILPKYPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTKFS 120
                 + T+F   I          G+AF ++    P      +  G   +  S     S
Sbjct: 61  TGAVASWATSFTVKISAPSKASFADGIAFALV----PVGSEPRRNGGYLGVFDSDVYNNS 116
Query: 121 TRMLAVEFDIIQNTELIDINDNHVGIDXXXXXXXXXXXXXYYSGNNHRIPILLRSGDPIQ 180
            + +AVEFD + N+   D +  H+GID               +G N  I I         
Sbjct: 117 AQTVAVEFDTLSNSGW-DPSMKHIGIDVNSIKSIATVSWDLANGENAEILIT-------- 167
Query: 181 AWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLITA---S 237
               Y++   L+  S+        Y  ++S  +D+++ + EY+  GFSA+TGL      +
Sbjct: 168 ----YNAATSLLVASLVHPSRRTSY--ILSERVDITNELPEYVSVGFSATTGLSEGYIET 221
Query: 238 HNVHGWSIS 246
           H+V  WS +
Sbjct: 222 HDVLSWSFA 230

>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 92/211 (43%), Gaps = 15/211 (7%)
Query: 327 SVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGH--NSQQGMKEFVAEIMSMGRL 384
           +V K +     +GSG  G V       L   VAIK++     +Q   K    E++ M  +
Sbjct: 21  TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCV 80
Query: 385 RHRNLVQLHGWCRKQ---DELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGI 441
            H+N++ L      Q   +E   VY  +                    ++   Y++L GI
Sbjct: 81  NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSY-LLYQMLCGI 139
Query: 442 AQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLG 501
                +LH   +  ++HRD+KPSNI++ +    K+ DFGLA+    G +   T  V T  
Sbjct: 140 K----HLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRY 190
Query: 502 YLAPELTRTGKATTSTDVYSYGILMLEVACG 532
           Y APE+        + D++S G +M E+  G
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221

>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By The Scaffolding Protein Jip1 And Sp600125 Length = 369

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 92/211 (43%), Gaps = 15/211 (7%)
Query: 327 SVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGH--NSQQGMKEFVAEIMSMGRL 384
           +V K +     +GSG  G V       L   VAIK++     +Q   K    E++ M  +
Sbjct: 21  TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCV 80
Query: 385 RHRNLVQLHGWCRKQ---DELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGI 441
            H+N++ L      Q   +E   VY  +                    ++   Y++L GI
Sbjct: 81  NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY-LLYQMLCGI 139
Query: 442 AQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLG 501
                +LH   +  ++HRD+KPSNI++ +    K+ DFGLA+    G +   T  V T  
Sbjct: 140 K----HLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRY 190
Query: 502 YLAPELTRTGKATTSTDVYSYGILMLEVACG 532
           Y APE+        + D++S G +M E+  G
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221

>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its Consensus Peptide Pimtide Length = 313

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 88/206 (42%), Gaps = 20/206 (9%)
Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFV------AEIMSMGRLRH--RN 388
           L+GSGGFG VY G+  S  L VAIK +  +      E         E++ + ++      
Sbjct: 43  LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYL 448
           +++L  W  + D  +L+ +                           +++L    +++ + 
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVL----EAVRHC 158
Query: 449 HEECNQRVVHRDVKPSNILLDTYLNA-KLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
           H   N  V+HRD+K  NIL+D      KL DFG   + +   +   T   GT  Y  PE 
Sbjct: 159 H---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEW 212
Query: 508 TRTGK-ATTSTDVYSYGILMLEVACG 532
            R  +    S  V+S GIL+ ++ CG
Sbjct: 213 IRYHRYHGRSAAVWSLGILLYDMVCG 238

>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And The Jnk Inhibitor V Length = 314

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 88/206 (42%), Gaps = 20/206 (9%)
Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFV------AEIMSMGRLRH--RN 388
           L+GSGGFG VY G+  S  L VAIK +  +      E         E++ + ++      
Sbjct: 44  LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYL 448
           +++L  W  + D  +L+ +                           +++L    +++ + 
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVL----EAVRHC 159
Query: 449 HEECNQRVVHRDVKPSNILLDTYLNA-KLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
           H   N  V+HRD+K  NIL+D      KL DFG   + +   +   T   GT  Y  PE 
Sbjct: 160 H---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEW 213
Query: 508 TRTGK-ATTSTDVYSYGILMLEVACG 532
            R  +    S  V+S GIL+ ++ CG
Sbjct: 214 IRYHRYHGRSAAVWSLGILLYDMVCG 239

>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain Length = 313

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 88/206 (42%), Gaps = 20/206 (9%)
Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFV------AEIMSMGRLRH--RN 388
           L+GSGGFG VY G+  S  L VAIK +  +      E         E++ + ++      
Sbjct: 43  LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYL 448
           +++L  W  + D  +L+ +                           +++L    +++ + 
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVL----EAVRHC 158
Query: 449 HEECNQRVVHRDVKPSNILLDTYLNA-KLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
           H   N  V+HRD+K  NIL+D      KL DFG   + +   +   T   GT  Y  PE 
Sbjct: 159 H---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEW 212
Query: 508 TRTGK-ATTSTDVYSYGILMLEVACG 532
            R  +    S  V+S GIL+ ++ CG
Sbjct: 213 IRYHRYHGRSAAVWSLGILLYDMVCG 238

>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Pyrrolo[2,3- A]carbazole Ligand Length = 313

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 88/206 (42%), Gaps = 20/206 (9%)
Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFV------AEIMSMGRLRH--RN 388
           L+GSGGFG VY G+  S  L VAIK +  +      E         E++ + ++      
Sbjct: 44  LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYL 448
           +++L  W  + D  +L+ +                           +++L    +++ + 
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVL----EAVRHC 159
Query: 449 HEECNQRVVHRDVKPSNILLDTYLNA-KLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
           H   N  V+HRD+K  NIL+D      KL DFG   + +   +   T   GT  Y  PE 
Sbjct: 160 H---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEW 213
Query: 508 TRTGK-ATTSTDVYSYGILMLEVACG 532
            R  +    S  V+S GIL+ ++ CG
Sbjct: 214 IRYHRYHGRSAAVWSLGILLYDMVCG 239

>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa Length = 300

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 88/206 (42%), Gaps = 20/206 (9%)
Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFV------AEIMSMGRLRH--RN 388
           L+GSGGFG VY G+  S  L VAIK +  +      E         E++ + ++      
Sbjct: 30  LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 89
Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYL 448
           +++L  W  + D  +L+ +                           +++L    +++ + 
Sbjct: 90  VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVL----EAVRHC 145
Query: 449 HEECNQRVVHRDVKPSNILLDTYLNA-KLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
           H   N  V+HRD+K  NIL+D      KL DFG   + +   +   T   GT  Y  PE 
Sbjct: 146 H---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEW 199
Query: 508 TRTGK-ATTSTDVYSYGILMLEVACG 532
            R  +    S  V+S GIL+ ++ CG
Sbjct: 200 IRYHRYHGRSAAVWSLGILLYDMVCG 225

>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution Length = 300

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 88/206 (42%), Gaps = 20/206 (9%)
Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFV------AEIMSMGRLRH--RN 388
           L+GSGGFG VY G+  S  L VAIK +  +      E         E++ + ++      
Sbjct: 30  LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 89
Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYL 448
           +++L  W  + D  +L+ +                           +++L    +++ + 
Sbjct: 90  VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVL----EAVRHC 145
Query: 449 HEECNQRVVHRDVKPSNILLDTYLNA-KLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
           H   N  V+HRD+K  NIL+D      KL DFG   + +   +   T   GT  Y  PE 
Sbjct: 146 H---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEW 199
Query: 508 TRTGK-ATTSTDVYSYGILMLEVACG 532
            R  +    S  V+S GIL+ ++ CG
Sbjct: 200 IRYHRYHGRSAAVWSLGILLYDMVCG 225

>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Beta Carboline Ligand I Length = 314

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 88/206 (42%), Gaps = 20/206 (9%)
Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFV------AEIMSMGRLRH--RN 388
           L+GSGGFG VY G+  S  L VAIK +  +      E         E++ + ++      
Sbjct: 44  LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYL 448
           +++L  W  + D  +L+ +                           +++L    +++ + 
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVL----EAVRHC 159
Query: 449 HEECNQRVVHRDVKPSNILLDTYLNA-KLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
           H   N  V+HRD+K  NIL+D      KL DFG   + +   +   T   GT  Y  PE 
Sbjct: 160 H---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEW 213
Query: 508 TRTGK-ATTSTDVYSYGILMLEVACG 532
            R  +    S  V+S GIL+ ++ CG
Sbjct: 214 IRYHRYHGRSAAVWSLGILLYDMVCG 239

>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target Of Aberrant Somatic Hypermutations In Diffuse Large Cell Lymphoma Length = 293

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 88/206 (42%), Gaps = 20/206 (9%)
Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFV------AEIMSMGRLRH--RN 388
           L+GSGGFG VY G+  S  L VAIK +  +      E         E++ + ++      
Sbjct: 15  LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 74
Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYL 448
           +++L  W  + D  +L+ +                           +++L    +++ + 
Sbjct: 75  VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVL----EAVRHC 130
Query: 449 HEECNQRVVHRDVKPSNILLDTYLNA-KLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
           H   N  V+HRD+K  NIL+D      KL DFG   + +   +   T   GT  Y  PE 
Sbjct: 131 H---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEW 184
Query: 508 TRTGK-ATTSTDVYSYGILMLEVACG 532
            R  +    S  V+S GIL+ ++ CG
Sbjct: 185 IRYHRYHGRSAAVWSLGILLYDMVCG 210

>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline Inhibitor Length = 356

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 92/209 (44%), Gaps = 15/209 (7%)
Query: 327 SVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGH--NSQQGMKEFVAEIMSMGRL 384
           +V K +     +GSG  G V       L   VAIK++     +Q   K    E++ M  +
Sbjct: 14  TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV 73
Query: 385 RHRNLVQLHGWCRKQ---DELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGI 441
            H+N++ L      Q   +E   VY  +                    ++   Y++L GI
Sbjct: 74  NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSY-LLYQMLXGI 132
Query: 442 AQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLG 501
                +LH   +  ++HRD+KPSNI++ +    K+ DFGLA+    G +   T  V T  
Sbjct: 133 K----HLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLART--AGTSFMMTPYVVTRY 183
Query: 502 YLAPELTRTGKATTSTDVYSYGILMLEVA 530
           Y APE+        + D++S G +M E+ 
Sbjct: 184 YRAPEVILGMGYKENVDIWSVGCIMGEMV 212

>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261 Length = 313

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 88/206 (42%), Gaps = 20/206 (9%)
Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFV------AEIMSMGRLRH--RN 388
           L+GSGGFG VY G+  S  L VAIK +  +      E         E++ + ++      
Sbjct: 43  LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYL 448
           +++L  W  + D  +L+ +                           +++L    +++ + 
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVL----EAVRHC 158
Query: 449 HEECNQRVVHRDVKPSNILLDTYLNA-KLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
           H   N  V+HRD+K  NIL+D      KL DFG   + +   +   T   GT  Y  PE 
Sbjct: 159 H---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEW 212
Query: 508 TRTGK-ATTSTDVYSYGILMLEVACG 532
            R  +    S  V+S GIL+ ++ CG
Sbjct: 213 IRYHRYHGRSAAVWSLGILLYDMVCG 238

>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 371

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 92/211 (43%), Gaps = 15/211 (7%)
Query: 327 SVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGH--NSQQGMKEFVAEIMSMGRL 384
           +V K +     +GSG  G V       L   VAIK++     +Q   K    E++ M  +
Sbjct: 22  TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCV 81
Query: 385 RHRNLVQLHGWCRKQ---DELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGI 441
            H+N++ L      Q   +E   VY  +                    ++   Y++L GI
Sbjct: 82  NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY-LLYQMLCGI 140
Query: 442 AQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLG 501
                +LH   +  ++HRD+KPSNI++ +    K+ DFGLA+    G +   T  V T  
Sbjct: 141 K----HLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRY 191
Query: 502 YLAPELTRTGKATTSTDVYSYGILMLEVACG 532
           Y APE+        + D++S G +M E+  G
Sbjct: 192 YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 222

>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As Potent Pim-1 Inhibitors Length = 299

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 90/208 (43%), Gaps = 24/208 (11%)
Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFV------AEIMSMGRLRH--RN 388
           L+GSGGFG VY G+  S  L VAIK +  +      E         E++ + ++      
Sbjct: 16  LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYL 448
           +++L  W  + D  +L+ +                           +++L    +++ + 
Sbjct: 76  VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVL----EAVRHC 131
Query: 449 HEECNQRVVHRDVKPSNILLDTYLNA---KLGDFGLAKIYEHGANPQTTHIVGTLGYLAP 505
           H   N  V+HRD+K  NIL+D  LN    KL DFG   + +   +   T   GT  Y  P
Sbjct: 132 H---NCGVLHRDIKDENILID--LNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPP 183
Query: 506 ELTRTGK-ATTSTDVYSYGILMLEVACG 532
           E  R  +    S  V+S GIL+ ++ CG
Sbjct: 184 EWIRYHRYHGRSAAVWSLGILLYDMVCG 211

>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Length = 364

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 92/208 (44%), Gaps = 15/208 (7%)
Query: 327 SVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGH--NSQQGMKEFVAEIMSMGRL 384
           +V K +     +GSG  G V       L   VAIK++     +Q   K    E++ M  +
Sbjct: 21  TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV 80
Query: 385 RHRNLVQLHGWCRKQ---DELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGI 441
            H+N++ L      Q   +E   VY  +                    ++   Y++L GI
Sbjct: 81  NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSY-LLYQMLXGI 139
Query: 442 AQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLG 501
                +LH   +  ++HRD+KPSNI++ +    K+ DFGLA+    G +   T  V T  
Sbjct: 140 K----HLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLART--AGTSFMMTPYVVTRY 190
Query: 502 YLAPELTRTGKATTSTDVYSYGILMLEV 529
           Y APE+        + D++S G +M E+
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEM 218

>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha (Mrck Alpha) Length = 437

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 46/83 (55%), Gaps = 7/83 (8%)
Query: 457 VHRDVKPSNILLDTYLNAKLGDFG-LAKIYEHGANPQTTHIVGTLGYLAPELTRT----- 510
           VHRD+KP NIL+D   + +L DFG   K+ E G   Q++  VGT  Y++PE+ +      
Sbjct: 197 VHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGT-VQSSVAVGTPDYISPEILQAMEGGK 255
Query: 511 GKATTSTDVYSYGILMLEVACGR 533
           G+     D +S G+ M E+  G 
Sbjct: 256 GRYGPECDWWSLGVCMYEMLYGE 278

>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As Potent, Highly Selective And Orally Bioavailable Pim Kinases Inhibitors Length = 294

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 88/206 (42%), Gaps = 20/206 (9%)
Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFV------AEIMSMGRLRH--RN 388
           L+GSGGFG VY G+  S  L VAIK +  +      E         E++ + ++      
Sbjct: 16  LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYL 448
           +++L  W  + D  +L+ +                           +++L    +++ + 
Sbjct: 76  VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVL----EAVRHC 131
Query: 449 HEECNQRVVHRDVKPSNILLDTYLNA-KLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
           H   N  V+HRD+K  NIL+D      KL DFG   + +   +   T   GT  Y  PE 
Sbjct: 132 H---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEW 185
Query: 508 TRTGK-ATTSTDVYSYGILMLEVACG 532
            R  +    S  V+S GIL+ ++ CG
Sbjct: 186 IRYHRYHGRSAAVWSLGILLYDMVCG 211

>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 92/211 (43%), Gaps = 15/211 (7%)
Query: 327 SVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGH--NSQQGMKEFVAEIMSMGRL 384
           +V K +     +GSG  G V       L   VAIK++     +Q   K    E++ M  +
Sbjct: 21  TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCV 80
Query: 385 RHRNLVQLHGWCRKQ---DELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGI 441
            H+N++ L      Q   +E   VY  +                    ++   Y++L GI
Sbjct: 81  NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY-LLYQMLCGI 139
Query: 442 AQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLG 501
                +LH   +  ++HRD+KPSNI++ +    K+ DFGLA+    G +   T  V T  
Sbjct: 140 K----HLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRY 190
Query: 502 YLAPELTRTGKATTSTDVYSYGILMLEVACG 532
           Y APE+        + D++S G +M E+  G
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221

>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 88/206 (42%), Gaps = 20/206 (9%)
Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFV------AEIMSMGRLRH--RN 388
           L+GSGGFG VY G+  S  L VAIK +  +      E         E++ + ++      
Sbjct: 31  LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYL 448
           +++L  W  + D  +L+ +                           +++L    +++ + 
Sbjct: 91  VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVL----EAVRHC 146
Query: 449 HEECNQRVVHRDVKPSNILLDTYLNA-KLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
           H   N  V+HRD+K  NIL+D      KL DFG   + +   +   T   GT  Y  PE 
Sbjct: 147 H---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEW 200
Query: 508 TRTGK-ATTSTDVYSYGILMLEVACG 532
            R  +    S  V+S GIL+ ++ CG
Sbjct: 201 IRYHRYHGRSAAVWSLGILLYDMVCG 226

>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 88/206 (42%), Gaps = 20/206 (9%)
Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFV------AEIMSMGRLRH--RN 388
           L+GSGGFG VY G+  S  L VAIK +  +      E         E++ + ++      
Sbjct: 31  LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYL 448
           +++L  W  + D  +L+ +                           +++L    +++ + 
Sbjct: 91  VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVL----EAVRHC 146
Query: 449 HEECNQRVVHRDVKPSNILLDTYLNA-KLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
           H   N  V+HRD+K  NIL+D      KL DFG   + +   +   T   GT  Y  PE 
Sbjct: 147 H---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEW 200
Query: 508 TRTGK-ATTSTDVYSYGILMLEVACG 532
            R  +    S  V+S GIL+ ++ CG
Sbjct: 201 IRYHRYHGRSAAVWSLGILLYDMVCG 226

>pdb|1FYU|A Chain A, Crystal Structure Of Erythrina Corallodendron Lectin In Hexagonal Crystal Form Length = 255

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 97/251 (38%), Gaps = 31/251 (12%)
Query: 7   DTTSFLYNGFL--HANLSLEGAAYISTSGILTVTNKSEGLI------GHALYPNPLRFKT 58
           +T SF ++ F   + NL+L+GAA I+ SG+L +T  ++  +      G  LY  P+    
Sbjct: 2   ETISFSFSEFEPGNDNLTLQGAALITQSGVLQLTKINQNGMPAWDSTGRTLYAKPVHIWD 61
Query: 59  SNKSVAIDFRTNFVFSILPKYP-DLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSST 117
                   F T F FSI   Y   L   GL F +     P      Q  G   I  +S  
Sbjct: 62  MTTGTVASFETRFSFSIEQPYTRPLPADGLVFFM----GPTKSKPAQGYGYLGIFNNSKQ 117
Query: 118 KFSTRMLAVEFDIIQNTELIDINDNHVGIDXXXXXXXXXXXXXYYSGNNHRIPILLRSGD 177
             S + L VEFD   N         H+GID                      P  L +G 
Sbjct: 118 DNSYQTLGVEFDTFSN-PWDPPQVPHIGIDVNSIRSIKTQ------------PFQLDNGQ 164
Query: 178 PIQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGL---I 234
                + Y +   +++  +        Y   I+  +D+  V+ E++  G S +TG     
Sbjct: 165 VANVVIKYDASSKILHAVLVYPSSGAIYT--IAEIVDVKQVLPEWVDVGLSGATGAQRDA 222
Query: 235 TASHNVHGWSI 245
             +H+V+ WS 
Sbjct: 223 AETHDVYSWSF 233

>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 88/206 (42%), Gaps = 20/206 (9%)
Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFV------AEIMSMGRLRH--RN 388
           L+GSGGFG VY G+  S  L VAIK +  +      E         E++ + ++      
Sbjct: 31  LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYL 448
           +++L  W  + D  +L+ +                           +++L    +++ + 
Sbjct: 91  VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVL----EAVRHC 146
Query: 449 HEECNQRVVHRDVKPSNILLDTYLNA-KLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
           H   N  V+HRD+K  NIL+D      KL DFG   + +   +   T   GT  Y  PE 
Sbjct: 147 H---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEW 200
Query: 508 TRTGK-ATTSTDVYSYGILMLEVACG 532
            R  +    S  V+S GIL+ ++ CG
Sbjct: 201 IRYHRYHGRSAAVWSLGILLYDMVCG 226

>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Naphtho-Difuran Ligand Length = 313

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 88/206 (42%), Gaps = 20/206 (9%)
Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFV------AEIMSMGRLRH--RN 388
           L+GSGGFG VY G+  S  L VAIK +  +      E         E++ + ++      
Sbjct: 44  LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYL 448
           +++L  W  + D  +L+ +                           +++L    +++ + 
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVL----EAVRHC 159
Query: 449 HEECNQRVVHRDVKPSNILLDTYLNA-KLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
           H   N  V+HRD+K  NIL+D      KL DFG   + +   +   T   GT  Y  PE 
Sbjct: 160 H---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEW 213
Query: 508 TRTGK-ATTSTDVYSYGILMLEVACG 532
            R  +    S  V+S GIL+ ++ CG
Sbjct: 214 IRYHRYHGRSAAVWSLGILLYDMVCG 239

>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With Ly333531 Length = 312

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 88/206 (42%), Gaps = 20/206 (9%)
Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFV------AEIMSMGRLRH--RN 388
           L+GSGGFG VY G+  S  L VAIK +  +      E         E++ + ++      
Sbjct: 43  LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYL 448
           +++L  W  + D  +L+ +                           +++L    +++ + 
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVL----EAVRHC 158
Query: 449 HEECNQRVVHRDVKPSNILLDTYLNA-KLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
           H   N  V+HRD+K  NIL+D      KL DFG   + +   +   T   GT  Y  PE 
Sbjct: 159 H---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEW 212
Query: 508 TRTGK-ATTSTDVYSYGILMLEVACG 532
            R  +    S  V+S GIL+ ++ CG
Sbjct: 213 IRYHRYHGRSAAVWSLGILLYDMVCG 238

>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With 4-(4- Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One Length = 328

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 88/206 (42%), Gaps = 20/206 (9%)
Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFV------AEIMSMGRLRH--RN 388
           L+GSGGFG VY G+  S  L VAIK +  +      E         E++ + ++      
Sbjct: 58  LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 117
Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYL 448
           +++L  W  + D  +L+ +                           +++L    +++ + 
Sbjct: 118 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVL----EAVRHC 173
Query: 449 HEECNQRVVHRDVKPSNILLDTYLNA-KLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
           H   N  V+HRD+K  NIL+D      KL DFG   + +   +   T   GT  Y  PE 
Sbjct: 174 H---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEW 227
Query: 508 TRTGK-ATTSTDVYSYGILMLEVACG 532
            R  +    S  V+S GIL+ ++ CG
Sbjct: 228 IRYHRYHGRSAAVWSLGILLYDMVCG 253

>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7- Azaindole Length = 273

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 90/208 (43%), Gaps = 24/208 (11%)
Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFV------AEIMSMGRLR--HRN 388
           L+GSGGFG VY G+  S  L VAIK +  +      E         E++ + ++      
Sbjct: 11  LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYL 448
           +++L  W  + D  +L+ +                           +++L    +++ + 
Sbjct: 71  VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVL----EAVRHC 126
Query: 449 HEECNQRVVHRDVKPSNILLDTYLNA---KLGDFGLAKIYEHGANPQTTHIVGTLGYLAP 505
           H   N  V+HRD+K  NIL+D  LN    KL DFG   + +   +   T   GT  Y  P
Sbjct: 127 H---NCGVLHRDIKDENILID--LNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPP 178
Query: 506 ELTRTGK-ATTSTDVYSYGILMLEVACG 532
           E  R  +    S  V+S GIL+ ++ CG
Sbjct: 179 EWIRYHRYHGRSAAVWSLGILLYDMVCG 206

>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor Length = 276

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 90/208 (43%), Gaps = 24/208 (11%)
Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFV------AEIMSMGRLR--HRN 388
           L+GSGGFG VY G+  S  L VAIK +  +      E         E++ + ++      
Sbjct: 14  LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 73
Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYL 448
           +++L  W  + D  +L+ +                           +++L    +++ + 
Sbjct: 74  VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVL----EAVRHC 129
Query: 449 HEECNQRVVHRDVKPSNILLDTYLNA---KLGDFGLAKIYEHGANPQTTHIVGTLGYLAP 505
           H   N  V+HRD+K  NIL+D  LN    KL DFG   + +   +   T   GT  Y  P
Sbjct: 130 H---NCGVLHRDIKDENILID--LNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPP 181
Query: 506 ELTRTGK-ATTSTDVYSYGILMLEVACG 532
           E  R  +    S  V+S GIL+ ++ CG
Sbjct: 182 EWIRYHRYHGRSAAVWSLGILLYDMVCG 209

>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1 Length = 328

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 88/206 (42%), Gaps = 20/206 (9%)
Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFV------AEIMSMGRLRH--RN 388
           L+GSGGFG VY G+  S  L VAIK +  +      E         E++ + ++      
Sbjct: 58  LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 117
Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYL 448
           +++L  W  + D  +L+ +                           +++L    +++ + 
Sbjct: 118 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVL----EAVRHC 173
Query: 449 HEECNQRVVHRDVKPSNILLDTYLNA-KLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
           H   N  V+HRD+K  NIL+D      KL DFG   + +   +   T   GT  Y  PE 
Sbjct: 174 H---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEW 227
Query: 508 TRTGK-ATTSTDVYSYGILMLEVACG 532
            R  +    S  V+S GIL+ ++ CG
Sbjct: 228 IRYHRYHGRSAAVWSLGILLYDMVCG 253

>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 92/211 (43%), Gaps = 15/211 (7%)
Query: 327 SVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGH--NSQQGMKEFVAEIMSMGRL 384
           +V K +     +GSG  G V       L   VAIK++     +Q   K    E++ M  +
Sbjct: 21  TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCV 80
Query: 385 RHRNLVQLHGWCRKQ---DELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGI 441
            H+N++ L      Q   +E   VY  +                    ++   Y++L GI
Sbjct: 81  NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSY-LLYQMLCGI 139
Query: 442 AQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLG 501
                +LH   +  ++HRD+KPSNI++ +    K+ DFGLA+    G +   T  V T  
Sbjct: 140 K----HLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLART--AGTSFMMTPYVVTRY 190
Query: 502 YLAPELTRTGKATTSTDVYSYGILMLEVACG 532
           Y APE+        + D++S G +M E+  G
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221

>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors Length = 273

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 90/208 (43%), Gaps = 24/208 (11%)
Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFV------AEIMSMGRLR--HRN 388
           L+GSGGFG VY G+  S  L VAIK +  +      E         E++ + ++      
Sbjct: 11  LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYL 448
           +++L  W  + D  +L+ +                           +++L    +++ + 
Sbjct: 71  VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVL----EAVRHC 126
Query: 449 HEECNQRVVHRDVKPSNILLDTYLNA---KLGDFGLAKIYEHGANPQTTHIVGTLGYLAP 505
           H   N  V+HRD+K  NIL+D  LN    KL DFG   + +   +   T   GT  Y  P
Sbjct: 127 H---NCGVLHRDIKDENILID--LNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPP 178
Query: 506 ELTRTGK-ATTSTDVYSYGILMLEVACG 532
           E  R  +    S  V+S GIL+ ++ CG
Sbjct: 179 EWIRYHRYHGRSAAVWSLGILLYDMVCG 206

>pdb|1OFS|A Chain A, Pea Lectin-sucrose Complex Length = 187

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 45/145 (31%), Positives = 66/145 (45%), Gaps = 10/145 (6%)
Query: 7   DTTSFLYNGFL--HANLSLEGAAYISTSGILTVTNKSEGLIGHALYPNPLRFKTSNKSVA 64
           +TTSFL   F     NL  +G  Y +T   LT+T   +  +G ALY +P+          
Sbjct: 2   ETTSFLITKFSPDQQNLIFQGDGY-TTKEKLTLTKAVKNTVGRALYSSPIHIWDRETGNV 60
Query: 65  IDFRTNFVFSI-LPKYPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTKFSTRM 123
            +F T+F F I  P   ++      FI     +P+      +LG+ N   S+    +T+ 
Sbjct: 61  ANFVTSFTFVINAPNSYNVADGFTFFIAPVDTKPQT--GGGYLGVFN---SAEYDKTTQT 115
Query: 124 LAVEFDIIQNTELIDIN-DNHVGID 147
           +AVEFD   N      N D H+GID
Sbjct: 116 VAVEFDTFYNAAWDPSNRDRHIGID 140

>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase Length = 330

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/215 (24%), Positives = 93/215 (43%), Gaps = 16/215 (7%)
Query: 322 YAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSM 381
           Y +    + G+  +  +G G +    R +  +  +E A+K I   S++   E +  ++  
Sbjct: 19  YFQSMVFSDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVID-KSKRDPSEEIEILLRY 77
Query: 382 GRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGI 441
           G+  H N++ L         + LV + +  G                 ++     +L  I
Sbjct: 78  GQ--HPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASF-----VLHTI 130
Query: 442 AQSLLYLHEECNQRVVHRDVKPSNIL-LDTYLNA---KLGDFGLAKIYEHGANPQTTHIV 497
            +++ YLH   +Q VVHRD+KPSNIL +D   N    ++ DFG AK      N       
Sbjct: 131 GKTVEYLH---SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQL-RAENGLLMTPC 186
Query: 498 GTLGYLAPELTRTGKATTSTDVYSYGILMLEVACG 532
            T  ++APE+ +        D++S GIL+  +  G
Sbjct: 187 YTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221

>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 92/211 (43%), Gaps = 15/211 (7%)
Query: 327 SVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGH--NSQQGMKEFVAEIMSMGRL 384
           +V K +     +GSG  G V       L   VAIK++     +Q   K    E++ M  +
Sbjct: 21  TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVV 80
Query: 385 RHRNLVQLHGWCRKQ---DELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGI 441
            H+N++ L      Q   +E   VY  +                    ++   Y++L GI
Sbjct: 81  NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSY-LLYQMLCGI 139
Query: 442 AQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLG 501
                +LH   +  ++HRD+KPSNI++ +    K+ DFGLA+    G +   T  V T  
Sbjct: 140 K----HLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLART--AGTSFMMTPYVVTRY 190
Query: 502 YLAPELTRTGKATTSTDVYSYGILMLEVACG 532
           Y APE+        + D++S G +M E+  G
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221

>pdb|2LTN|A Chain A, Design, Expression, And Crystallization Of Recombinant Lectin From The Garden Pea (Pisum Sativum) Length = 181

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 45/145 (31%), Positives = 66/145 (45%), Gaps = 10/145 (6%)
Query: 7   DTTSFLYNGFL--HANLSLEGAAYISTSGILTVTNKSEGLIGHALYPNPLRFKTSNKSVA 64
           +TTSFL   F     NL  +G  Y +T   LT+T   +  +G ALY +P+          
Sbjct: 2   ETTSFLITKFSPDQQNLIFQGDGY-TTKEKLTLTKAVKNTVGRALYSSPIHIWDRETGNV 60
Query: 65  IDFRTNFVFSI-LPKYPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTKFSTRM 123
            +F T+F F I  P   ++      FI     +P+      +LG+ N   S+    +T+ 
Sbjct: 61  ANFVTSFTFVINAPNSYNVADGFTFFIAPVDTKPQT--GGGYLGVFN---SAEYDKTTQT 115
Query: 124 LAVEFDIIQNTELIDIN-DNHVGID 147
           +AVEFD   N      N D H+GID
Sbjct: 116 VAVEFDTFYNAAWDPSNRDRHIGID 140

>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of P27kip1 Carboxy-Terminal Peptide Length = 320

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 88/206 (42%), Gaps = 20/206 (9%)
Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFV------AEIMSMGRLRH--RN 388
           L+GSGGFG VY G+  S  L VAIK +  +      E         E++ + ++      
Sbjct: 50  LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 109
Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYL 448
           +++L  W  + D  +L+ +                           +++L    +++ + 
Sbjct: 110 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVL----EAVRHC 165
Query: 449 HEECNQRVVHRDVKPSNILLDTYLNA-KLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
           H   N  V+HRD+K  NIL+D      KL DFG   + +   +   T   GT  Y  PE 
Sbjct: 166 H---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEW 219
Query: 508 TRTGK-ATTSTDVYSYGILMLEVACG 532
            R  +    S  V+S GIL+ ++ CG
Sbjct: 220 IRYHRYHGRSAAVWSLGILLYDMVCG 245

>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small Molecule Inhibitor Length = 298

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 88/206 (42%), Gaps = 20/206 (9%)
Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFV------AEIMSMGRLRH--RN 388
           L+GSGGFG VY G+  S  L VAIK +  +      E         E++ + ++      
Sbjct: 16  LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYL 448
           +++L  W  + D  +L+ +                           +++L    +++ + 
Sbjct: 76  VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVL----EAVRHC 131
Query: 449 HEECNQRVVHRDVKPSNILLDTYLNA-KLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
           H   N  V+HRD+K  NIL+D      KL DFG   + +   +   T   GT  Y  PE 
Sbjct: 132 H---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEW 185
Query: 508 TRTGK-ATTSTDVYSYGILMLEVACG 532
            R  +    S  V+S GIL+ ++ CG
Sbjct: 186 IRYHRYHGRSAAVWSLGILLYDMVCG 211

>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With Inhibitor Length = 333

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 88/206 (42%), Gaps = 20/206 (9%)
Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFV------AEIMSMGRLRH--RN 388
           L+GSGGFG VY G+  S  L VAIK +  +      E         E++ + ++      
Sbjct: 63  LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 122
Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYL 448
           +++L  W  + D  +L+ +                           +++L    +++ + 
Sbjct: 123 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVL----EAVRHC 178
Query: 449 HEECNQRVVHRDVKPSNILLDTYLNA-KLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
           H   N  V+HRD+K  NIL+D      KL DFG   + +   +   T   GT  Y  PE 
Sbjct: 179 H---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEW 232
Query: 508 TRTGK-ATTSTDVYSYGILMLEVACG 532
            R  +    S  V+S GIL+ ++ CG
Sbjct: 233 IRYHRYHGRSAAVWSLGILLYDMVCG 258

>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A Natural Jnk1 Inhibitor Length = 379

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 92/211 (43%), Gaps = 15/211 (7%)
Query: 327 SVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGH--NSQQGMKEFVAEIMSMGRL 384
           +V K +     +GSG  G V       L   VAIK++     +Q   K    E++ M  +
Sbjct: 21  TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCV 80
Query: 385 RHRNLVQLHGWCRKQ---DELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGI 441
            H+N++ L      Q   +E   VY  +                    ++   Y++L GI
Sbjct: 81  NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY-LLYQMLCGI 139
Query: 442 AQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLG 501
                +LH   +  ++HRD+KPSNI++ +    K+ DFGLA+    G +   T  V T  
Sbjct: 140 K----HLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPEVVTRY 190
Query: 502 YLAPELTRTGKATTSTDVYSYGILMLEVACG 532
           Y APE+        + D++S G +M E+  G
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221

>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546 Length = 308

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 88/206 (42%), Gaps = 20/206 (9%)
Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFV------AEIMSMGRLRH--RN 388
           L+GSGGFG VY G+  S  L VAIK +  +      E         E++ + ++      
Sbjct: 38  LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 97
Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYL 448
           +++L  W  + D  +L+ +                           +++L    +++ + 
Sbjct: 98  VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVL----EAVRHC 153
Query: 449 HEECNQRVVHRDVKPSNILLDTYLNA-KLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
           H   N  V+HRD+K  NIL+D      KL DFG   + +   +   T   GT  Y  PE 
Sbjct: 154 H---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEW 207
Query: 508 TRTGK-ATTSTDVYSYGILMLEVACG 532
            R  +    S  V+S GIL+ ++ CG
Sbjct: 208 IRYHRYHGRSAAVWSLGILLYDMVCG 233

>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain Length = 346

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 91/208 (43%), Gaps = 16/208 (7%)
Query: 329 TKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRN 388
           + G+  +  +G G +    R +  +  +E A+K I   S++   E +  ++  G+  H N
Sbjct: 26  SDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVID-KSKRDPSEEIEILLRYGQ--HPN 82
Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYL 448
           ++ L         + LV + +  G                 ++     +L  I +++ YL
Sbjct: 83  IITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASF-----VLHTIGKTVEYL 137
Query: 449 HEECNQRVVHRDVKPSNIL-LDTYLNA---KLGDFGLAKIYEHGANPQTTHIVGTLGYLA 504
           H   +Q VVHRD+KPSNIL +D   N    ++ DFG AK      N        T  ++A
Sbjct: 138 H---SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLR-AENGLLMTPCYTANFVA 193
Query: 505 PELTRTGKATTSTDVYSYGILMLEVACG 532
           PE+ +        D++S GIL+  +  G
Sbjct: 194 PEVLKRQGYDEGCDIWSLGILLYTMLAG 221

>pdb|1RIN|A Chain A, X-Ray Crystal Structure Of A Pea Lectin-Trimannoside Complex At 2.6 Angstroms Resolution Length = 180

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 45/145 (31%), Positives = 64/145 (44%), Gaps = 10/145 (6%)
Query: 7   DTTSFLYNGFL--HANLSLEGAAYISTSGILTVTNKSEGLIGHALYPNPLRFKTSNKSVA 64
           +TTSFL   F     NL  +G  Y +T   LT+T   +  +G ALY +P+          
Sbjct: 2   ETTSFLITKFSPDQQNLIFQGDGY-TTKEKLTLTKAVKNTVGRALYSSPIHIWDRETGNV 60
Query: 65  IDFRTNFVFSILPKYPDLGGQGLAFIIISTN-RPENCLANQFLGLPNITMSSSTKFSTRM 123
            +F T+F F I          G  F I   + +P+      +LG+ N   S+    +T  
Sbjct: 61  ANFVTSFTFVINAPNSYNVADGFTFFIAPVDTKPQT--GGGYLGVFN---SAEYDKTTET 115
Query: 124 LAVEFDIIQNTELIDIN-DNHVGID 147
           +AVEFD   N      N D H+GID
Sbjct: 116 VAVEFDTFYNAAWDPSNRDRHIGID 140

>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/204 (24%), Positives = 83/204 (40%), Gaps = 15/204 (7%)
Query: 332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRN--- 388
           F     +G+G FGRV        G   A+K +       +K+    +     L+  N   
Sbjct: 43  FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYL 448
           LV+L    +    L +V +YV  G                  +         I  +  YL
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYL 157
Query: 449 HEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELT 508
           H   +  +++RD+KP N+L+D     ++ DFG AK        +T  + GT  YLAP + 
Sbjct: 158 H---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPAII 210
Query: 509 RTGKATTSTDVYSYGILMLEVACG 532
            +     + D ++ G+L+ E+A G
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex With The Imidazo[1,2-B]pyridazine Inhibitor K00135 Length = 301

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 56/220 (25%), Positives = 89/220 (40%), Gaps = 45/220 (20%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQG-MKEFVAEIMSMGRLRHRNLVQL---- 392
           VG G +G V+RG     G  VA+K      ++   +E   E+ +   LRH N++      
Sbjct: 16  VGKGRYGEVWRGSWQ--GENVAVKIFSSRDEKSWFRE--TELYNTVMLRHENILGFIASD 71
Query: 393 ----HGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYL 448
               H       +L L+  Y   GS                      +I++ IA  L +L
Sbjct: 72  MTSRHS----STQLWLITHYHEMGSLYDYLQLTTLDTVSCL------RIVLSIASGLAHL 121
Query: 449 HEEC-----NQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEH-------GANPQTTHI 496
           H E         + HRD+K  NIL+       + D GLA ++         G NP+    
Sbjct: 122 HIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPR---- 177
Query: 497 VGTLGYLAPEL------TRTGKATTSTDVYSYGILMLEVA 530
           VGT  Y+APE+           +    D++++G+++ EVA
Sbjct: 178 VGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVA 217

>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2- Aminopyridine Inhibitor Length = 301

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 56/220 (25%), Positives = 89/220 (40%), Gaps = 45/220 (20%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQG-MKEFVAEIMSMGRLRHRNLVQL---- 392
           VG G +G V+RG     G  VA+K      ++   +E   E+ +   LRH N++      
Sbjct: 16  VGKGRYGEVWRGSWQ--GENVAVKIFSSRDEKSWFRE--TELYNTVMLRHENILGFIASD 71
Query: 393 ----HGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYL 448
               H       +L L+  Y   GS                      +I++ IA  L +L
Sbjct: 72  MTSRHS----STQLWLITHYHEMGSLYDYLQLTTLDTVSCL------RIVLSIASGLAHL 121
Query: 449 HEEC-----NQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEH-------GANPQTTHI 496
           H E         + HRD+K  NIL+       + D GLA ++         G NP+    
Sbjct: 122 HIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPR---- 177
Query: 497 VGTLGYLAPEL------TRTGKATTSTDVYSYGILMLEVA 530
           VGT  Y+APE+           +    D++++G+++ EVA
Sbjct: 178 VGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVA 217

>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin Length = 330

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 56/220 (25%), Positives = 89/220 (40%), Gaps = 45/220 (20%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQG-MKEFVAEIMSMGRLRHRNLVQL---- 392
           VG G +G V+RG     G  VA+K      ++   +E   E+ +   LRH N++      
Sbjct: 45  VGKGRYGEVWRGSWQ--GENVAVKIFSSRDEKSWFRE--TELYNTVMLRHENILGFIASD 100
Query: 393 ----HGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYL 448
               H       +L L+  Y   GS                      +I++ IA  L +L
Sbjct: 101 MTSRHS----STQLWLITHYHEMGSLYDYLQLTTLDTVSC------LRIVLSIASGLAHL 150
Query: 449 HEEC-----NQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEH-------GANPQTTHI 496
           H E         + HRD+K  NIL+       + D GLA ++         G NP+    
Sbjct: 151 HIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPR---- 206
Query: 497 VGTLGYLAPEL------TRTGKATTSTDVYSYGILMLEVA 530
           VGT  Y+APE+           +    D++++G+++ EVA
Sbjct: 207 VGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVA 246

>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3 Length = 361

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 88/205 (42%), Gaps = 18/205 (8%)
Query: 338 VGSGGFGRVYRGLMPSLGLE-VAIKRIGHNSQQGMKEFVA-EIMSMGRLRHRNLVQLHGW 395
           +GSG FG V R +   L  E VA+K I   +   + E V  EI++   LRH N+V+    
Sbjct: 28  IGSGNFG-VARLMRDKLTKELVAVKYIERGA--AIDENVQREIINHRSLRHPNIVRFKEV 84
Query: 396 CRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQR 455
                 L ++ +Y   G                 + D+       +   + Y H   + +
Sbjct: 85  ILTPTHLAIIMEYASGGELYERICNAGRF-----SEDEARFFFQQLLSGVSYCH---SMQ 136
Query: 456 VVHRDVKPSNILLD--TYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPE-LTRTGK 512
           + HRD+K  N LLD       K+ DFG +K     + P++T  VGT  Y+APE L R   
Sbjct: 137 ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLLRQEY 194
Query: 513 ATTSTDVYSYGILMLEVACGRRSIE 537
                DV+S G+ +  +  G    E
Sbjct: 195 DGKIADVWSCGVTLYVMLVGAYPFE 219

>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 386

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 56/211 (26%), Positives = 91/211 (43%), Gaps = 15/211 (7%)
Query: 327 SVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGH--NSQQGMKEFVAEIMSMGRL 384
           +V K +     +GSG  G V       L   VAIK++     +Q   K    E++ M  +
Sbjct: 23  TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCV 82
Query: 385 RHRNLVQLHGWCRKQ---DELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGI 441
            H+N++ L      Q   +E   VY  +                    ++   Y++L GI
Sbjct: 83  NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY-LLYQMLCGI 141
Query: 442 AQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLG 501
                +LH   +  ++HRD+KPSNI++ +    K+ DFGLA+    G +      V T  
Sbjct: 142 K----HLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMVPFVVTRY 192
Query: 502 YLAPELTRTGKATTSTDVYSYGILMLEVACG 532
           Y APE+        + D++S G +M E+  G
Sbjct: 193 YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 223

>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 50/204 (24%), Positives = 83/204 (40%), Gaps = 15/204 (7%)
Query: 332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRN--- 388
           F     +G+G FGRV        G   A+K +       +K+    +     L+  N   
Sbjct: 43  FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYL 448
           LV+L    +    L +V +YV  G                  +         I  +  YL
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYL 157
Query: 449 HEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELT 508
           H   +  +++RD+KP N+L+D     ++ DFG AK        +T  + GT   LAPE+ 
Sbjct: 158 H---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEALAPEII 210
Query: 509 RTGKATTSTDVYSYGILMLEVACG 532
            +     + D ++ G+L+ E+A G
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|1LOF|C Chain C, X-Ray Structure Of A Biantennary Octasaccharide-Lectin Complex At 2.3 Angstroms Resolution Length = 181

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 45/145 (31%), Positives = 65/145 (44%), Gaps = 10/145 (6%)
Query: 7   DTTSFLYNGFL--HANLSLEGAAYISTSGILTVTNKSEGLIGHALYPNPLRFKTSNKSVA 64
           +TTSF    F     NL  +G  Y +T   LT+T      +G ALY +P+    S     
Sbjct: 2   ETTSFSITKFGPDQQNLIFQGDGY-TTKERLTLTKAVRNTVGRALYSSPIHIWDSKTGNV 60
Query: 65  IDFRTNFVFSI-LPKYPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTKFSTRM 123
            +F T+F F I  P   ++      FI     +P+      +LG+ N   S     +++ 
Sbjct: 61  ANFVTSFTFVIDAPNSYNVADGFTFFIAPVDTKPQT--GGGYLGVFN---SKDYDKTSQT 115
Query: 124 LAVEFDIIQNTELIDIN-DNHVGID 147
           +AVEFD   NT     N D H+GID
Sbjct: 116 VAVEFDTFYNTAWDPSNGDRHIGID 140

>pdb|1LGC|A Chain A, Interaction Of A Legume Lectin With The N2 Fragment Of Human Lactotransferrin Or With The Isolated Biantennary Glycopeptide: Role Of The Fucose Moiety Length = 181

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 45/145 (31%), Positives = 65/145 (44%), Gaps = 10/145 (6%)
Query: 7   DTTSFLYNGFL--HANLSLEGAAYISTSGILTVTNKSEGLIGHALYPNPLRFKTSNKSVA 64
           +TTSF    F     NL  +G  Y +T   LT+T      +G ALY +P+    S     
Sbjct: 2   ETTSFSITKFGPDQPNLIFQGDGY-TTKERLTLTKAVRNTVGRALYSSPIHIWDSKTGNV 60
Query: 65  IDFRTNFVFSI-LPKYPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTKFSTRM 123
            +F T+F F I  P   ++      FI     +P+      +LG+ N   S     +++ 
Sbjct: 61  ANFVTSFTFVIDAPNSYNVADGFTFFIAPVDTKPQT--GGGYLGVFN---SKDYDKTSQT 115
Query: 124 LAVEFDIIQNTELIDIN-DNHVGID 147
           +AVEFD   NT     N D H+GID
Sbjct: 116 VAVEFDTFYNTAWDPSNGDRHIGID 140

>pdb|1LGB|A Chain A, Interaction Of A Legume Lectin With The N2 Fragment Of Human Lactotransferrin Or With The Isolated Biantennary Glycopeptide: Role Of The Fucose Moiety Length = 181

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 45/145 (31%), Positives = 65/145 (44%), Gaps = 10/145 (6%)
Query: 7   DTTSFLYNGF--LHANLSLEGAAYISTSGILTVTNKSEGLIGHALYPNPLRFKTSNKSVA 64
           +TTSF    F     NL  +G  Y +T   LT+T      +G ALY +P+    S     
Sbjct: 2   ETTSFSITKFGPDQPNLIFQGDGY-TTKERLTLTKAVRNTVGRALYSSPIHIWDSKTGNV 60
Query: 65  IDFRTNFVFSI-LPKYPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTKFSTRM 123
            +F T+F F I  P   ++      FI     +P+      +LG+ N   S     +++ 
Sbjct: 61  ANFVTSFTFVIDAPNSYNVADGFTFFIAPVDTKPQT--GGGYLGVFN---SKDYDKTSQT 115
Query: 124 LAVEFDIIQNTELIDIN-DNHVGID 147
           +AVEFD   NT     N D H+GID
Sbjct: 116 VAVEFDTFYNTAWDPSNGDRHIGID 140

>pdb|1LOA|A Chain A, Three-Dimensional Structures Of Complexes Of Lathyrus Ochrus Isolectin I With Glucose And Mannose: Fine Specificity Of The Monosaccharide-Binding Site Length = 181

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 45/145 (31%), Positives = 65/145 (44%), Gaps = 10/145 (6%)
Query: 7   DTTSFLYNGFL--HANLSLEGAAYISTSGILTVTNKSEGLIGHALYPNPLRFKTSNKSVA 64
           +TTSF    F     NL  +G  Y +T   LT+T      +G ALY +P+    S     
Sbjct: 2   ETTSFSITKFGPDQQNLIFQGDGY-TTKERLTLTKAVRNTVGRALYSSPIHIWDSKTGNV 60
Query: 65  IDFRTNFVFSI-LPKYPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTKFSTRM 123
            +F T+F F I  P   ++      FI     +P+      +LG+ N   S     +++ 
Sbjct: 61  ANFVTSFTFVIDAPNSYNVADGFTFFIAPVDTKPQT--GGGYLGVFN---SKDYDKTSQT 115
Query: 124 LAVEFDIIQNTELIDIN-DNHVGID 147
           +AVEFD   NT     N D H+GID
Sbjct: 116 VAVEFDTFYNTAWDPSNGDRHIGID 140

>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 11 (p38 Beta) In Complex With Nilotinib Length = 348

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 54/100 (54%), Gaps = 12/100 (12%)
Query: 435 YKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTT 494
           Y++L G    L Y+H   +  ++HRD+KPSN+ ++     ++ DFGLA+     A+ + T
Sbjct: 130 YQLLRG----LKYIH---SAGIIHRDLKPSNVAVNEDCELRILDFGLAR----QADEEMT 178
Query: 495 HIVGTLGYLAPELTRTGKATTST-DVYSYGILMLEVACGR 533
             V T  Y APE+         T D++S G +M E+  G+
Sbjct: 179 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218

>pdb|1N3O|A Chain A, Pterocarcpus Angolensis Lectin In Complex With Alpha-Methyl Glucose Length = 252

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 64/261 (24%), Positives = 106/261 (40%), Gaps = 49/261 (18%)
Query: 7   DTTSFLYNGFL--HANLSLEGAAYISTSGILTVTNKSEG-----LIGHALYPNPLRFKTS 59
           D+ SF +  F     NL  +G A I  + +      S G      +G  L+   +     
Sbjct: 2   DSLSFGFPTFPSDQKNLIFQGDAQIKNNAVQLTKTDSNGNPVASTVGRILFSAQVHLWEK 61
Query: 60  NKSVAIDFRTNFVFSILPKYP-DLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTK 118
           + S   +F++ F FS+  K P   G  G+AF I     P+  + +   G      +  T 
Sbjct: 62  SSSRVANFQSQFSFSL--KSPLSNGADGIAFFIAP---PDTTIPSGSGGGLLGLFAPGTA 116
Query: 119 FST---RMLAVEFDII--QNTELIDINDNHVGIDXXXXXXXXXXXXXYYSGNNHRIPILL 173
            +T   +++AVEFD    Q++   D N  H+GID                         +
Sbjct: 117 QNTSANQVIAVEFDTFYAQDSNTWDPNYPHIGIDVNS----------------------I 154
Query: 174 RSGDPIQAWVDYSSQEMLINVSICP----LGVPKPY----RPLISLPIDLSSVIDEYMYT 225
           RS   ++ W     Q + + V+  P    L V   Y    R  +S  +D+ SV+ E++  
Sbjct: 155 RSVKTVK-WDRRDGQSLNVLVTFNPSTRNLDVVATYSDGTRYEVSYEVDVRSVLPEWVRV 213
Query: 226 GFSASTGLITASHNVHGWSIS 246
           GFSA++G    +H +  WS +
Sbjct: 214 GFSAASGEQYQTHTLESWSFT 234

>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis SerineTHREONINE Kinase, Pkne Length = 309

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 30/76 (39%), Positives = 37/76 (48%)
Query: 457 VHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTS 516
            HRDVKP NIL+     A L DFG+A         Q  + VGTL Y APE      AT  
Sbjct: 156 THRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYXAPERFSESHATYR 215
Query: 517 TDVYSYGILMLEVACG 532
            D+Y+   ++ E   G
Sbjct: 216 ADIYALTCVLYECLTG 231

>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A Resolution Length = 336

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 55/220 (25%), Positives = 89/220 (40%), Gaps = 38/220 (17%)
Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAE--IMSMGRLRHRNLVQL-- 392
           L+G G +G VY+G +      VA+K     ++Q    F+ E  I  +  + H N+ +   
Sbjct: 20  LIGRGRYGAVYKGSLDERP--VAVKVFSFANRQN---FINEKNIYRVPLMEHDNIARFIV 74
Query: 393 ---HGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLH 449
                    + E LLV +Y PNGS                 W    ++   + + L YLH
Sbjct: 75  GDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS------DWVSSCRLAHSVTRGLAYLH 128
Query: 450 EECNQ------RVVHRDVKPSNILLDTYLNAKLGDFGLA------KIYEHGANPQTT-HI 496
            E  +       + HRD+   N+L+       + DFGL+      ++   G         
Sbjct: 129 TELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISE 188
Query: 497 VGTLGYLAPE-------LTRTGKATTSTDVYSYGILMLEV 529
           VGT+ Y+APE       L     A    D+Y+ G++  E+
Sbjct: 189 VGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEI 228

>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle Protein Titin Length = 321

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 46/199 (23%), Positives = 91/199 (45%), Gaps = 16/199 (8%)
Query: 338 VGSGGFGRVYRGLMPSLGLEVAIK--RIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGW 395
           +G G FG V+R +  S       K  ++    Q  +K+   EI  +   RHRN++ LH  
Sbjct: 13  LGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKK---EISILNIARHRNILHLHES 69
Query: 396 CRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYLHEECNQR 455
               +EL+++++++                         ++    + ++L +LH   +  
Sbjct: 70  FESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQ----VCEALQFLH---SHN 122
Query: 456 VVHRDVKPSNILLDTYLNA--KLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKA 513
           + H D++P NI+  T  ++  K+ +FG A+  + G N +   +     Y APE+ +    
Sbjct: 123 IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRL--LFTAPEYYAPEVHQHDVV 180
Query: 514 TTSTDVYSYGILMLEVACG 532
           +T+TD++S G L+  +  G
Sbjct: 181 STATDMWSLGTLVYVLLSG 199

>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 (rsk2) Length = 342

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 51/208 (24%), Positives = 89/208 (42%), Gaps = 16/208 (7%)
Query: 329 TKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRN 388
           T G+  +  +G G +    R +  +  +E A+K I   S++   E +  ++  G+  H N
Sbjct: 21  TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIID-KSKRDPTEEIEILLRYGQ--HPN 77
Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLYL 448
           ++ L         + +V + +  G                 +      +L  I +++ YL
Sbjct: 78  IITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREAS-----AVLFTITKTVEYL 132
Query: 449 HEECNQRVVHRDVKPSNIL-LDTYLNA---KLGDFGLAKIYEHGANPQTTHIVGTLGYLA 504
           H    Q VVHRD+KPSNIL +D   N    ++ DFG AK      N        T  ++A
Sbjct: 133 HA---QGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLR-AENGLLMTPCYTANFVA 188
Query: 505 PELTRTGKATTSTDVYSYGILMLEVACG 532
           PE+        + D++S G+L+  +  G
Sbjct: 189 PEVLERQGYDAACDIWSLGVLLYTMLTG 216

>pdb|1Q8O|A Chain A, Pterocartpus Angolensis Lectin Pal In Complex With The Dimmanoside Man(Alpha1-2)man Length = 252

Iteration: 1
 Score = 49.3 bits (116), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 64/261 (24%), Positives = 106/261 (40%), Gaps = 49/261 (18%)
Query: 7   DTTSFLYNGFL--HANLSLEGAAYISTSGILTVTNKSEG-----LIGHALYPNPLRFKTS 59
           D+ SF +  F     NL  +G A I  + +      S G      +G  L+   +     
Sbjct: 2   DSLSFGFPTFPSDQKNLIFQGDAQIKNNAVQLTKTDSNGNPVASTVGRILFSAQVHLWEK 61
Query: 60  NKSVAIDFRTNFVFSILPKYP-DLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTK 118
           + S   +F++ F FS+  K P   G  G+AF I     P+  + +   G      +  T 
Sbjct: 62  SSSRVANFQSQFSFSL--KSPLSNGADGIAFFIAP---PDTTIPSGSGGGLLGLFAPGTA 116
Query: 119 FST---RMLAVEFDII--QNTELIDINDNHVGIDXXXXXXXXXXXXXYYSGNNHRIPILL 173
            +T   +++AVEFD    Q++   D N  H+GID                         +
Sbjct: 117 QNTSANQVIAVEFDTFYAQDSNTWDPNYPHIGIDVNS----------------------I 154
Query: 174 RSGDPIQAWVDYSSQEMLINVSICP----LGVPKPY----RPLISLPIDLSSVIDEYMYT 225
           RS   ++ W     Q + + V+  P    L V   Y    R  +S  +D+ SV+ E++  
Sbjct: 155 RSVKTVK-WDRRDGQSLNVLVTFNPSTRNLDVVATYSDGTRYEVSYEVDVRSVLPEWVRV 213
Query: 226 GFSASTGLITASHNVHGWSIS 246
           GFSA++G    +H +  WS +
Sbjct: 214 GFSAASGEQYQTHTLESWSFT 234

>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea Inhibitor Length = 316

Iteration: 1
 Score = 49.3 bits (116), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 49/212 (23%), Positives = 92/212 (43%), Gaps = 24/212 (11%)
Query: 338 VGSGGFGRVYRGLMPSLGLE-------VAIKRIG----HNSQQGMKEFVAEIMSMGRLRH 386
           +G G FG+V      + G++       VA+K +     H+  + +   +  ++ +G   H
Sbjct: 36  LGRGAFGQVIEA--DAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH--H 91
Query: 387 RNLVQLHGWCRKQD-ELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSL 445
            N+V L G C K    L+++ ++   G+                T +  YK  + +   +
Sbjct: 92  LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLI 151
Query: 446 LY-------LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IYEHGANPQTTHIV 497
            Y       +    +++ +HRD+   NILL      K+ DFGLA+ I +     +     
Sbjct: 152 CYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 498 GTLGYLAPELTRTGKATTSTDVYSYGILMLEV 529
             L ++APE       T  +DV+S+G+L+ E+
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 243

>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b Length = 317

Iteration: 1
 Score = 49.3 bits (116), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 35/100 (35%), Positives = 51/100 (51%), Gaps = 9/100 (9%)
Query: 436 KILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNA---KLGDFGLAKIYEHGANPQ 492
           +I+  I  ++ +LH   +  + HRDVKP N+L  +       KL DFG AK  E   N  
Sbjct: 113 EIMRDIGTAIQFLH---SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAK--ETTQNAL 167
Query: 493 TTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACG 532
            T    T  Y+APE+    K   S D++S G++M  + CG
Sbjct: 168 QTPCY-TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 206

>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated Protein Kinase-Activated Protein Kinase 3 (Mk3)-Inhibitor Complex Length = 336

Iteration: 1
 Score = 49.3 bits (116), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 35/100 (35%), Positives = 51/100 (51%), Gaps = 9/100 (9%)
Query: 436 KILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNA---KLGDFGLAKIYEHGANPQ 492
           +I+  I  ++ +LH   +  + HRDVKP N+L  +       KL DFG AK  E   N  
Sbjct: 132 EIMRDIGTAIQFLH---SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAK--ETTQNAL 186
Query: 493 TTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACG 532
            T    T  Y+APE+    K   S D++S G++M  + CG
Sbjct: 187 QTPCY-TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 225

>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From Cryptosporidium Parvum, Cgd7_40 Length = 345

Iteration: 1
 Score = 49.3 bits (116), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 53/105 (50%), Gaps = 14/105 (13%)
Query: 433 QRYKILIGIAQ----SLLYLHEECNQRVVHRDVKPSNILLDT--YLNAKLGDFGLAKIY- 485
           QR K++  I +    +L YLH   NQ + HRD+KP N L  T      KL DFGL+K + 
Sbjct: 165 QREKLISNIMRQIFSALHYLH---NQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFY 221
Query: 486 --EHGANPQTTHIVGTLGYLAPELTRTGKAT--TSTDVYSYGILM 526
              +G     T   GT  ++APE+  T   +     D +S G+L+
Sbjct: 222 KLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLL 266

>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex With Indazole Derivative (Compound 18) Length = 410

Iteration: 1
 Score = 49.3 bits (116), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Query: 457 VHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRT----GK 512
           +HRDVKP N+LLD   + KL DFG           +    VGT  Y++PE+ ++    G 
Sbjct: 190 IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGY 249
Query: 513 ATTSTDVYSYGILMLEVACG 532
                D +S G+ + E+  G
Sbjct: 250 YGRECDWWSVGVFLYEMLVG 269

>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase 2 Length = 400

Iteration: 1
 Score = 49.3 bits (116), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 36/100 (36%), Positives = 52/100 (52%), Gaps = 8/100 (8%)
Query: 436 KILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYL-NA--KLGDFGLAKIYEHGANPQ 492
           +I   I +++ YLH   +  + HRDVKP N+L  +   NA  KL DFG AK  E  ++  
Sbjct: 165 EIXKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK--ETTSHNS 219
Query: 493 TTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACG 532
            T    T  Y+APE+    K   S D +S G++   + CG
Sbjct: 220 LTTPCYTPYYVAPEVLGPEKYDKSCDXWSLGVIXYILLCG 259

>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil Length = 415

Iteration: 1
 Score = 49.3 bits (116), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Query: 457 VHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRT----GK 512
           +HRDVKP N+LLD   + KL DFG           +    VGT  Y++PE+ ++    G 
Sbjct: 195 IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGY 254
Query: 513 ATTSTDVYSYGILMLEVACG 532
                D +S G+ + E+  G
Sbjct: 255 YGRECDWWSVGVFLYEMLVG 274

>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe Complex Structure Length = 406

Iteration: 1
 Score = 48.9 bits (115), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Query: 457 VHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRT----GK 512
           +HRDVKP N+LLD   + KL DFG           +    VGT  Y++PE+ ++    G 
Sbjct: 195 IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGY 254
Query: 513 ATTSTDVYSYGILMLEVACG 532
                D +S G+ + E+  G
Sbjct: 255 YGRECDWWSVGVFLYEMLVG 274

>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With N-(4-chlorophenyl)-2- ((pyridin-4-ylmethyl)amino)benzamide Length = 360

Iteration: 1
 Score = 48.9 bits (115), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 51/90 (56%), Gaps = 4/90 (4%)
Query: 441 IAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IYEHGANPQTTHIVGT 499
           +A+ + +L    +++ +HRD+   NILL      K+ DFGLA+ IY++    +       
Sbjct: 208 VARGMEFLS---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLP 264
Query: 500 LGYLAPELTRTGKATTSTDVYSYGILMLEV 529
           L ++APE       +T +DV+SYG+L+ E+
Sbjct: 265 LKWMAPESIFDKIYSTKSDVWSYGVLLWEI 294

>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A Dihydroquinazolinone Inhibitor Length = 370

Iteration: 1
 Score = 48.9 bits (115), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 54/100 (54%), Gaps = 12/100 (12%)
Query: 435 YKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTT 494
           Y++L G    L Y+H   +  ++HRD+KPSN+ ++     ++ DFGLA+     A+ + T
Sbjct: 138 YQLLRG----LKYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLAR----QADEEMT 186
Query: 495 HIVGTLGYLAPELTRTGKATTST-DVYSYGILMLEVACGR 533
             V T  Y APE+         T D++S G +M E+  G+
Sbjct: 187 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226

>pdb|2LAL|A Chain A, Crystal Structure Determination And Refinement At 2.3 Angstroms Resolution Of The Lentil Lectin Length = 181

Iteration: 1
 Score = 48.9 bits (115), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 43/145 (29%), Positives = 64/145 (44%), Gaps = 10/145 (6%)
Query: 7   DTTSFLYNGFL--HANLSLEGAAYISTSGILTVTNKSEGLIGHALYPNPLRFKTSNKSVA 64
           +TTSF    F     NL  +G  Y +T G LT+T   +  +G ALY  P+     +    
Sbjct: 2   ETTSFSITKFSPDQQNLIFQGDGY-TTKGKLTLTKAVKSTVGRALYSTPIHIWDRDTGNV 60
Query: 65  IDFRTNFVFSILPKYPDLGGQGLAFIIISTN-RPENCLANQFLGLPNITMSSSTKFSTRM 123
            +F T+F F I          G  F I   + +P+      +LG+ N   S     +++ 
Sbjct: 61  ANFVTSFTFVIDAPSSYNVADGFTFFIAPVDTKPQT--GGGYLGVFN---SKEYDKTSQT 115
Query: 124 LAVEFDIIQNTELIDIN-DNHVGID 147
           +AVEFD   N      N + H+GID
Sbjct: 116 VAVEFDTFYNAAWDPSNKERHIGID 140

>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii, 25.M01780 Or Tgme49_007820 Length = 458

Iteration: 1
 Score = 48.9 bits (115), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 57/229 (24%), Positives = 96/229 (41%), Gaps = 43/229 (18%)
Query: 335 QNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQ--GMKEFVAEIMSMGRLRHRNLVQ- 391
           ++L+G+G +G V           VAIK+I    +     K  + EI  + RL H ++V+ 
Sbjct: 58  RHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKV 117
Query: 392 ----LHGWCRKQDELLLVYDYVPNGSXXXXXXXXXXXXXXXXTWDQRYKILIGIAQSLLY 447
               +     K DEL +V +   +                  T    Y +L+G+     Y
Sbjct: 118 LDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELHIKTL--LYNLLVGVK----Y 171
Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGAN----------------- 490
           +H   +  ++HRD+KP+N L++   + K+ DFGLA+  ++  N                 
Sbjct: 172 VH---SAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLV 228
Query: 491 --PQTTHI-------VGTLGYLAPELTRTGKA-TTSTDVYSYGILMLEV 529
             P T ++       V T  Y APEL    +  T + DV+S G +  E+
Sbjct: 229 TFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAEL 277
  Database: pdbaa

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	653
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	1e-126
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	1e-115
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	1e-114
3soc_A	322	Activin receptor type-2A; structural genomics cons	1e-71
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	2e-61
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	5e-57
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	2e-56
3ipv_A	251	Lectin alpha chain; galactose binding, SEED lectin	6e-56
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	7e-56
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	1e-55
2fmd_A	240	Lectin, agglutinin, BMA; legume lectin, beta sandw	2e-55
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	3e-55
1v6i_A	232	Agglutinin, PNA, galactose-binding lectin; open qu	3e-55
1dbn_A	239	MAL, protein (leukoagglutinin); plant lectin, carb	4e-55
1fat_A	252	Phytohemagglutinin-L; glycoprotein, plant defense	5e-55
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	2e-54
1hql_A	257	Lectin; xenograft antigen, sugar BI protein; HET:	1e-53
1fx5_A	242	UEA-I, UE-I, anti-H(O) lectin I; legume lectin, HO	1e-53
3zyr_A	261	Lectin; sugar binding protein, N-glycan; HET: NAG	3e-53
1sbf_A	253	Soybean agglutinin; lectin; HET: NAG GAL; 2.43A {G	3e-53
1fny_A	237	BARK lectin, BARK agglutinin I,polypeptide A; legu	3e-53
2bqp_A	234	Protein (PEA lectin); D-glucopyranose complex, sug	4e-53
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	2e-52
2eig_A	234	Lectin; L-fucosyl, N-acetyl-D-glucosamine, SUG bin	3e-52
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	3e-52
1avb_A	226	Arcelin-1; lectin-like glycoprotein, plant defense	5e-52
1g7y_A	253	Stem/LEAF lectin DB58; jelly roll fold, sugar bind	5e-52
1wbf_A	242	Protein (agglutinin); lectin (agglutinin), legume	5e-52
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	2e-51
1qnw_A	242	Chitin binding lectin, UEA-II; carbohydrate bindin	3e-50
1gzc_A	239	Erythrina crista-galli lectin; carbohydrate, sugar	3e-50
1n47_A	233	Isolectin B4; cancer antigen, vicia villosa lectin	8e-50
3q4u_A	301	Activin receptor type-1; structural genomics conso	2e-49
1gsl_A	243	Griffonia simplicifolia lectin 4; glycoprotein, ma	2e-49
1ioa_A	240	Arcelin-5A, ARC5A; lectin-like proteins, plant def	7e-49
1f9k_A	238	Acidic lectin; legume lectin, glycosylated protein	7e-49
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	1e-48
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	2e-48
1dhk_B	223	Bean lectin-like inhibitor, porcine pancreatic alp	7e-48
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	1e-47
2ltn_A	181	PEA lectin, alpha chain; 1.70A {Pisum sativum} SCO	6e-42
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	6e-41
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	2e-40
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	2e-39
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	5e-39
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	8e-39
2a19_B	284	Interferon-induced, double-stranded RNA-activated	2e-37
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	1e-36
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	2e-36
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	2e-36
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	3e-36
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	3e-36
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	4e-36
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	1e-35
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	2e-35
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	2e-35
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	2e-35
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	3e-35
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	6e-35
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	1e-34
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	1e-34
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	3e-34
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	3e-34
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	4e-34
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	4e-34
3ork_A	311	Serine/threonine protein kinase; structural genomi	4e-34
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	5e-34
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	7e-34
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	9e-34
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	1e-33
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	2e-33
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	2e-33
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	2e-33
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	2e-33
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	4e-33
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	5e-33
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	6e-33
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	6e-33
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	7e-33
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	7e-33
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	8e-33
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	1e-32
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	2e-32
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	2e-32
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	3e-32
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	3e-32
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	3e-32
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	5e-32
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	5e-32
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	5e-32
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	6e-32
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	1e-31
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	1e-31
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	1e-31
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	2e-31
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	2e-31
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	2e-31
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	2e-31
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	2e-31
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	3e-31
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	3e-31
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	5e-31
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	6e-31
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	6e-31
4aoj_A	329	High affinity nerve growth factor receptor; transf	7e-31
3pls_A	298	Macrophage-stimulating protein receptor; protein k	7e-31
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	7e-31
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	1e-30
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	1e-30
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	2e-30
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	2e-30
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	3e-30
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	4e-30
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	4e-30
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	6e-30
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	7e-30
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	7e-30
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	8e-30
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	9e-30
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	1e-29
1nls_A	237	Concanavalin A; lectin, agglutinin; 0.94A {Canaval	2e-29
1nls_A	237	Concanavalin A; lectin, agglutinin; 0.94A {Canaval	1e-11
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	2e-29
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	3e-29
3aln_A	327	Dual specificity mitogen-activated protein kinase;	3e-29
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	4e-29
1qmo_E	133	Mannose binding lectin, FRIL; crosslink, hematopoi	4e-29
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	6e-29
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	6e-29
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	1e-28
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	1e-28
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	1e-28
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	3e-28
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	4e-28
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	5e-28
3fme_A	290	Dual specificity mitogen-activated protein kinase;	7e-28
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	8e-28
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	8e-28
3an0_A	340	Dual specificity mitogen-activated protein kinase;	9e-28
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	1e-27
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	1e-27
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	1e-27
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	1e-27
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	1e-27
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	2e-27
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	3e-27
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	3e-27
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	3e-27
3bhy_A	283	Death-associated protein kinase 3; death associate	4e-27
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	5e-27
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	5e-27
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	6e-27
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	6e-27
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	1e-26
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	1e-26
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	2e-26
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	2e-26
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	2e-26
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	3e-26
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	3e-26
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	4e-26
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	4e-26
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	5e-26
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	5e-26
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	6e-26
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	7e-26
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	8e-26
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	9e-26
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	9e-26
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	1e-25
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	1e-25
2dyl_A	318	Dual specificity mitogen-activated protein kinase	1e-25
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	2e-25
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	2e-25
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	2e-25
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	2e-25
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	2e-25
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	2e-25
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	2e-25
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	3e-25
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	3e-25
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	4e-25
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	7e-25
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	7e-25
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	1e-24
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	2e-24
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	2e-24
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	2e-24
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	2e-24
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	2e-24
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	5e-24
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	5e-24
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	7e-24
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	9e-24
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	1e-23
3o0g_A	292	Cell division protein kinase 5; kinase activator c	1e-23
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	2e-23
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	2e-23
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	2e-23
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	3e-23
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	4e-23
3uqc_A	286	Probable conserved transmembrane protein; structur	4e-23
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	4e-23
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	6e-23
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	8e-23
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	1e-22
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	2e-22
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	2e-22
3niz_A	311	Rhodanese family protein; structural genomics, str	2e-22
1qmo_A	113	Mannose binding lectin, FRIL; crosslink, hematopoi	3e-22
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	9e-22
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	1e-21
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	1e-21
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	2e-21
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	2e-21
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	5e-21
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	8e-21
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	2e-20
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	3e-20
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	4e-20
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	1e-19
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	1e-19
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	4e-19
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	9e-19
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	4e-18
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	6e-18
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	7e-18
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	1e-17
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	2e-17
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	2e-17
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	3e-17
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	2e-16
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	2e-16
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	2e-16
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	3e-16
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	3e-16
3rp9_A	458	Mitogen-activated protein kinase; structural genom	4e-16
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	5e-16
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	8e-16
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	8e-16
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	1e-15
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	1e-15
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	1e-15
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	2e-15
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	2e-15
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	1e-13
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	3e-13
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	9e-13
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	1e-12
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-11
1gv9_A	260	P58/ergic-53; lectin, carbohydrate binding; 1.46A	6e-11
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	9e-11
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	1e-09
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	2e-09
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	5e-09
2ltn_B	52	PEA lectin, beta chain; 1.70A {Pisum sativum} SCOP	8e-09
2dur_A	253	VIP36;, vesicular integral-membrane protein VIP36;	4e-08
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	5e-08
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	5e-08
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	2e-07
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	3e-07
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	5e-07
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	5e-07
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	1e-05
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	8e-05
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	2e-04

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score =  375 bits (965), Expect = e-126
 Identities = 117/307 (38%), Positives = 182/307 (59%), Gaps = 7/307 (2%)

Query: 309 EDWEIQCG-ARRFKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS 367
           ED E+  G  +RF   EL   +  F  +N++G GGFG+VY+G +   G  VA+KR+    
Sbjct: 8   EDPEVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLAD-GTLVAVKRLKEER 66

Query: 368 QQGMK-EFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLR 426
            QG + +F  E+  +    HRNL++L G+C    E LLVY Y+ NGS+   L ++    +
Sbjct: 67  TQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPES-Q 125

Query: 427 KLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE 486
             L W +R +I +G A+ L YLH+ C+ +++HRDVK +NILLD    A +GDFGLAK+ +
Sbjct: 126 PPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 185

Query: 487 HGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAE-- 544
           +     TT + GT+G++APE   TGK++  TDV+ YG+++LE+  G+R+ +  + A +  
Sbjct: 186 YKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDD 245

Query: 545 LLLVDWVKELHLEGEITQAIDQTLDY-YDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEF 603
           ++L+DWVK L  E ++   +D  L   Y   E E ++ + L C+  +P+ RP M  VV  
Sbjct: 246 VMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRM 305

Query: 604 LLGDSSL 610
           L GD   
Sbjct: 306 LEGDGLA 312

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score =  345 bits (888), Expect = e-115
 Identities = 105/308 (34%), Positives = 162/308 (52%), Gaps = 13/308 (4%)

Query: 302 KYADKMLEDWEIQCGARRFKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIK 361
              D +   + +   + R    +L   T  F  + L+G G FG+VY+G++   G +VA+K
Sbjct: 11  SINDALSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRD-GAKVALK 69

Query: 362 RIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDK 421
           R    S QG++EF  EI ++   RH +LV L G+C +++E++L+Y Y+ NG+L + L+  
Sbjct: 70  RRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGS 129

Query: 422 DHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGL 481
           D      ++W+QR +I IG A+ L YLH      ++HRDVK  NILLD     K+ DFG+
Sbjct: 130 DLP-TMSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGI 185

Query: 482 AKIYEHGANPQTTHI----VGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIE 537
           +K    G     TH+     GTLGY+ PE    G+ T  +DVYS+G+++ EV C R +I 
Sbjct: 186 SKK---GTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIV 242

Query: 538 PQKAAAELLLVDWVKELHLEGEITQAIDQTL-DYYDLAEAELVLNLGLFCSAPNPVYRPD 596
                  + L +W  E H  G++ Q +D  L D           +  + C A +   RP 
Sbjct: 243 QSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPS 302

Query: 597 MRRVVEFL 604
           M  V+  L
Sbjct: 303 MGDVLWKL 310

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score =  342 bits (880), Expect = e-114
 Identities = 104/304 (34%), Positives = 161/304 (52%), Gaps = 22/304 (7%)

Query: 318 RRFKYAELASVTKGFGEQ------NLVGSGGFGRVYRGLMPSLGLEVAIKRIGH----NS 367
             F + EL +VT  F E+      N +G GGFG VY+G +      VA+K++       +
Sbjct: 13  HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVN--NTTVAVKKLAAMVDITT 70

Query: 368 QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRK 427
           ++  ++F  EI  M + +H NLV+L G+    D+L LVY Y+PNGSL   L   D     
Sbjct: 71  EELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDG--TP 128

Query: 428 LLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEH 487
            L+W  R KI  G A  + +LHE      +HRD+K +NILLD    AK+ DFGLA+  E 
Sbjct: 129 PLSWHMRCKIAQGAANGINFLHENH---HIHRDIKSANILLDEAFTAKISDFGLARASEK 185

Query: 488 GANP-QTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELL 546
            A    T+ IVGT  Y+APE    G+ T  +D+YS+G+++LE+  G  +++  +     L
Sbjct: 186 FAQTVMTSRIVGTTAYMAPEAL-RGEITPKSDIYSFGVVLLEIITGLPAVDEHR--EPQL 242

Query: 547 LVDWVKELHLE-GEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL 605
           L+D  +E+  E   I   ID+ ++  D    E + ++   C       RPD+++V + L 
Sbjct: 243 LLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 302

Query: 606 GDSS 609
             ++
Sbjct: 303 EMTA 306

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score =  233 bits (596), Expect = 1e-71
 Identities = 65/309 (21%), Positives = 120/309 (38%), Gaps = 33/309 (10%)

Query: 320 FKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIM 379
                L   +       +   G FG V++  +      VA+K      +Q   +   E+ 
Sbjct: 14  LGTENLYFQSMPLQLLEVKARGRFGCVWKAQLL--NEYVAVKIFPIQDKQSW-QNEYEVY 70

Query: 380 SMGRLRHRNLVQLHGWCRK----QDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRY 435
           S+  ++H N++Q  G  ++      +L L+  +   GSL   L         +++W++  
Sbjct: 71  SLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLK------ANVVSWNELC 124

Query: 436 KILIGIAQSLLYLHEE-------CNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHG 488
            I   +A+ L YLHE+           + HRD+K  N+LL   L A + DFGLA  +E G
Sbjct: 125 HIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAG 184

Query: 489 ANP-QTTHIVGTLGYLAPELTRTG-----KATTSTDVYSYGILMLEVACGRRSIEPQKAA 542
            +   T   VGT  Y+APE+          A    D+Y+ G+++ E+A    + +     
Sbjct: 185 KSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDE 244

Query: 543 AELLLVDWVKELHLEGEITQAIDQTL-------DYYDLAEAELVLNLGLFCSAPNPVYRP 595
             L   + + +     ++ + +            +   A   ++      C   +   R 
Sbjct: 245 YMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARL 304

Query: 596 DMRRVVEFL 604
               V E +
Sbjct: 305 SAGCVGERI 313

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score =  206 bits (526), Expect = 2e-61
 Identities = 80/311 (25%), Positives = 144/311 (46%), Gaps = 44/311 (14%)

Query: 309 EDWEIQCGARRFKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRI--GHN 366
           +D +I        + +L        E+  +G+G FG V+R      G +VA+K +     
Sbjct: 30  DDMDI-------PWCDLN-----IKEK--IGAGSFGTVHRAEW--HGSDVAVKILMEQDF 73

Query: 367 SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLR 426
             + + EF+ E+  M RLRH N+V   G   +   L +V +Y+  GSL +LL     + +
Sbjct: 74  HAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQ 133

Query: 427 KLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE 486
             L   +R  +   +A+ + YLH   N  +VHR++K  N+L+D     K+ DFGL+++ +
Sbjct: 134 --LDERRRLSMAYDVAKGMNYLH-NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL-K 189

Query: 487 HGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGR---RSIEPQKAAA 543
                 +    GT  ++APE+ R   +   +DVYS+G+++ E+A  +    ++ P +  A
Sbjct: 190 ASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVA 249

Query: 544 ELLLVDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEF 603
                  V       EI + ++  +       A ++      C    P  RP    +++ 
Sbjct: 250 A------VGFKCKRLEIPRNLNPQV-------AAIIEG----CWTNEPWKRPSFATIMDL 292

Query: 604 L--LGDSSLPP 612
           L  L  S++PP
Sbjct: 293 LRPLIKSAVPP 303

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score =  193 bits (493), Expect = 5e-57
 Identities = 69/313 (22%), Positives = 124/313 (39%), Gaps = 57/313 (18%)

Query: 309 EDWEIQCGARRFKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQ 368
               +          E+      + +Q  +G GGFG V++G +      VAIK +     
Sbjct: 12  RLPTL-------ADNEIE-----YEKQ--IGKGGFGLVHKGRLVKDKSVVAIKSLILGDS 57

Query: 369 QG-------MKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDK 421
           +G        +EF  E+  M  L H N+V+L+G         +V ++VP G L   L   
Sbjct: 58  EGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNP--PRMVMEFVPCGDLYHRL--- 112

Query: 422 DHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTY-----LNAKL 476
                  + W  + ++++ IA  + Y+    N  +VHRD++  NI L +      + AK+
Sbjct: 113 -LDKAHPIKWSVKLRLMLDIALGIEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKV 170

Query: 477 GDFGLAKIYEHGANPQTTHIVGTLGYLAPEL--TRTGKATTSTDVYSYGILMLEVACGR- 533
            DFGL++   H      + ++G   ++APE         T   D YS+ +++  +  G  
Sbjct: 171 ADFGLSQQSVH----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEG 226

Query: 534 --RSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNP 591
                   K       ++ ++E  L   I +         ++ E          C + +P
Sbjct: 227 PFDEYSYGKIK----FINMIREEGLRPTIPEDCPP--RLRNVIEL---------CWSGDP 271

Query: 592 VYRPDMRRVVEFL 604
             RP    +V+ L
Sbjct: 272 KKRPHFSYIVKEL 284

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score =  193 bits (492), Expect = 2e-56
 Identities = 66/323 (20%), Positives = 110/323 (34%), Gaps = 50/323 (15%)

Query: 320 FKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAE-- 377
              +E +          L+G G +G VY+G +      VA+K     S    + F+ E  
Sbjct: 3   AAASEPSLDLDNLKLLELIGRGRYGAVYKGSL--DERPVAVKVF---SFANRQNFINEKN 57

Query: 378 IMSMGRLRHRNLVQLHGWCRK-----QDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWD 432
           I  +  + H N+ +      +     + E LLV +Y PNGSL K L            W 
Sbjct: 58  IYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLS------LHTSDWV 111

Query: 433 QRYKILIGIAQSLLYLHEE------CNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE 486
              ++   + + L YLH E          + HRD+   N+L+       + DFGL+    
Sbjct: 112 SSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLT 171

Query: 487 HGANPQ-------TTHIVGTLGYLAPE-------LTRTGKATTSTDVYSYGILMLEVACG 532
                +           VGT+ Y+APE       L     A    D+Y+ G++  E+   
Sbjct: 172 GNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMR 231

Query: 533 RRSIEPQKAAAELLLV--DWVKELHLEGEITQA---------IDQTLDYYDLAEAELVLN 581
              + P ++  E  +     V       ++              +      LA   L   
Sbjct: 232 CTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLK-E 290

Query: 582 LGLFCSAPNPVYRPDMRRVVEFL 604
               C   +   R   +   E +
Sbjct: 291 TIEDCWDQDAEARLTAQXAEERM 313

>3ipv_A Lectin alpha chain; galactose binding, SEED lectin, hemagglutinin, legume lectin fungal, sugar binding protein; 2.04A {Spatholobus parviflorus} PDB: 3ipv_B 3usu_B* 3usu_A* Length = 251

 Score =  189 bits (481), Expect = 6e-56
 Identities = 72/261 (27%), Positives = 118/261 (45%), Gaps = 29/261 (11%)

Query: 6   ADTTSFLYNGF--LHANLSLEGAAYISTSGILTVTNKSEG------LIGHALYPNPLRFK 57
           A+ TSF+++ F  L  NL L+G A ++ +G+L +TN  +        +G A Y  P+   
Sbjct: 1   AEETSFVFSKFKPLEPNLILQGDALVTVAGVLQLTNVDKNGVPEPSSLGRATYSAPINIW 60

Query: 58  TSNKSVAIDFRTNFVFSILPKYPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSST 117
            S   +   F T+F F+I          GLAF +       +     FLGL +  +S ST
Sbjct: 61  DSATGLVASFATSFRFTIYAPNIATIADGLAFFLAPVASAPDS-GGGFLGLFDSAVSGST 119

Query: 118 KFSTRMLAVEFDIIQNTELIDINDNHVGIDISSLISSASEPASYYSGNNHRIPILLRSGD 177
               + +AVEFD  +NT   D    H+G D++S+ S  +   S            L +G+
Sbjct: 120 Y---QTVAVEFDTYENTVFTDPPYTHIGFDVNSISSIKTVKWS------------LANGE 164

Query: 178 PIQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLITA- 236
             +  + Y+S   L+  S+           +++  +DLSSV+ E++  GFSA+TG     
Sbjct: 165 AAKVLITYNSAVKLLVASLVYPS--SKTSFILADIVDLSSVLPEWVRVGFSAATGASGGK 222

Query: 237 --SHNVHGWSISIGGKAQDLN 255
             +H+V  WS +         
Sbjct: 223 IETHDVFSWSFASKLAGXXTK 243

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score =  191 bits (487), Expect = 7e-56
 Identities = 72/320 (22%), Positives = 125/320 (39%), Gaps = 44/320 (13%)

Query: 332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQ 391
             E   VG G FG V +        +VAIK+I   S+   K F+ E+  + R+ H N+V+
Sbjct: 12  VEEV--VGRGAFGVVCKAKW--RAKDVAIKQI--ESESERKAFIVELRQLSRVNHPNIVK 65

Query: 392 LHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEE 451
           L+G C     + LV +Y   GSL  +L   +       T        +  +Q + YLH  
Sbjct: 66  LYGACLN--PVCLVMEYAEGGSLYNVLHGAEPLPY--YTAAHAMSWCLQCSQGVAYLHSM 121

Query: 452 CNQRVVHRDVKPSNILLD-TYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRT 510
             + ++HRD+KP N+LL       K+ DFG A   +       T+  G+  ++APE+   
Sbjct: 122 QPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQT----HMTNNKGSAAWMAPEVFEG 177

Query: 511 GKATTSTDVYSYGILMLEVACGRR-----SIEPQKAAAELLLVDWVKELHLEGEITQAID 565
              +   DV+S+GI++ EV   R+          +    +              + + + 
Sbjct: 178 SNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVH-----NGTRP--PLIKNLP 230

Query: 566 QTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL------LGDSSLPPLPPDIHL 619
           +      L            C + +P  RP M  +V+ +         +  P   P  H 
Sbjct: 231 K--PIESLMTR---------CWSKDPSQRPSMEEIVKIMTHLMRYFPGADEPLQYPCQHS 279

Query: 620 KDTRNIMGFSDFPNDSDFFN 639
                      + + ++F+ 
Sbjct: 280 LPPGEDGRVEPYVDFAEFYR 299

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score =  189 bits (482), Expect = 1e-55
 Identities = 83/309 (26%), Positives = 128/309 (41%), Gaps = 57/309 (18%)

Query: 311 WEIQCGARRFKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRI----GHN 366
            EI        +AEL        E   +G GGFG+VYR     +G EVA+K        +
Sbjct: 2   LEI-------DFAELT-----LEEI--IGIGGFGKVYRAFW--IGDEVAVKAARHDPDED 45

Query: 367 SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLR 426
             Q ++    E      L+H N++ L G C K+  L LV ++   G L+++L  K     
Sbjct: 46  ISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKR---- 101

Query: 427 KLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLD--------TYLNAKLGD 478
             +  D      + IA+ + YLH+E    ++HRD+K SNIL+         +    K+ D
Sbjct: 102 --IPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITD 159

Query: 479 FGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGR---RS 535
           FGLA+ +            G   ++APE+ R    +  +DV+SYG+L+ E+  G    R 
Sbjct: 160 FGLAREWHRT---TKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRG 216

Query: 536 IEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRP 595
           I+    A        V    L   I     +      L E          C  P+P  RP
Sbjct: 217 IDGLAVAY------GVAMNKLALPIPSTCPEPF--AKLMED---------CWNPDPHSRP 259

Query: 596 DMRRVVEFL 604
               +++ L
Sbjct: 260 SFTNILDQL 268

>2fmd_A Lectin, agglutinin, BMA; legume lectin, beta sandwich, protein-carbohydrate complex, sugar binding protein; HET: MAN; 1.90A {Bowringia mildbraedii} Length = 240

 Score =  188 bits (477), Expect = 2e-55
 Identities = 65/258 (25%), Positives = 113/258 (43%), Gaps = 26/258 (10%)

Query: 6   ADTTSFLYNGFL--HANLSLEGAAYISTSGILTVT------NKSEGLIGHALYPNPLRFK 57
           A++  F +  F     +L  +G A + ++  L +T      N   G +G ALY  P+R  
Sbjct: 1   ANSVCFTFTDFESGQQDLIFQGDASVGSNKALQLTKVDSKGNPQGGSVGRALYTAPIRLW 60

Query: 58  TSNKSVAIDFRTNFVFSILPKYPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSST 117
            S+  VA  F T F FSI             FI     +  +    + LGL   + ++ +
Sbjct: 61  QSSSLVA-SFETTFTFSISQGSSTPADALTFFIASPDTKIPSGSGGRLLGLFGSSNNAGS 119

Query: 118 KFSTRMLAVEFDIIQNTELIDINDNHVGIDISSLISSASEPASYYSGNNHRIPILLRSGD 177
                +++VEFD   NT++ D N  H+GID++S+ S A+    + +G             
Sbjct: 120 --DNGVVSVEFDTYPNTDIGDPNYRHIGIDVNSIRSKAASKWDWQNGKTA---------- 167

Query: 178 PIQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLITAS 237
              A + Y+S    ++V       P     ++S  ++L++V  +++  GFSA+TG  T +
Sbjct: 168 --TAHISYNSASKRLSVV---SSYPNSSPVVVSFDVELNNVBPBWVRVGFSATTGQYTQT 222

Query: 238 HNVHGWSISIGGKAQDLN 255
           +N+  WS          N
Sbjct: 223 NNILAWSFRSSLMGYQAN 240

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score =  189 bits (483), Expect = 3e-55
 Identities = 61/306 (19%), Positives = 111/306 (36%), Gaps = 37/306 (12%)

Query: 332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQ 391
            GE   +G G FG+  +      G  + +K +    ++  + F+ E+  M  L H N+++
Sbjct: 14  HGEV--LGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLK 71

Query: 392 LHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEE 451
             G   K   L  + +Y+  G+L  ++   D +      W QR      IA  + YLH  
Sbjct: 72  FIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQ----YPWSQRVSFAKDIASGMAYLHS- 126

Query: 452 CNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGAN-------------PQTTHIVG 498
               ++HRD+   N L+    N  + DFGLA++                    +   +VG
Sbjct: 127 --MNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVG 184

Query: 499 TLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEG 558
              ++APE+          DV+S+GI++ E+     +            ++    L    
Sbjct: 185 NPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDR-- 242

Query: 559 EITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL--LGDSSLPPLPPD 616
                   +   + +            C   +P  RP   ++  +L  L       LP  
Sbjct: 243 YCPPNCPPSF--FPITVR---------CCDLDPEKRPSFVKLEHWLETLRMHLAGHLPLG 291

Query: 617 IHLKDT 622
             L+  
Sbjct: 292 PQLEQL 297

>1v6i_A Agglutinin, PNA, galactose-binding lectin; open quaternary association, orthorhombic, carbohydrate specificity, protein crystallography; HET: GAL GLC; 2.15A {Arachis hypogaea} SCOP: b.29.1.1 PDB: 1bzw_A* 1v6j_A* 1v6k_A* 1v6l_A* 1v6m_A 1v6n_A 1v6o_A 2dva_A* 1cq9_A 1ciw_A* 1qf3_A* 1rir_A* 1rit_A* 2dh1_A 1cr7_A* 2dv9_A* 2dvb_A* 2dvd_A* 2dvf_A 2dvg_A* ... Length = 232

 Score =  186 bits (474), Expect = 3e-55
 Identities = 59/243 (24%), Positives = 99/243 (40%), Gaps = 23/243 (9%)

Query: 6   ADTTSFLYNGFLHAN--LSLEGAAYISTSGILTVTNKSE-GLIGHALYPNPLRFKTSNKS 62
           A+T SF +N F   N  ++ +G   + ++G + +TN ++   +G  LY  P+R  +S   
Sbjct: 1   AETVSFNFNSFSEGNPAINFQGDVTVLSNGNIQLTNLNKVNSVGRVLYAMPVRIWSSATG 60

Query: 63  VAIDFRTNFVFSILPKYPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTKFSTR 122
               F T+F F +          G+ F I   +      +     L       +      
Sbjct: 61  NVASFLTSFSFEMKDIKDYDPADGIIFFIAPEDTQIPAGSIGGGTLGVSDTKGAG----H 116

Query: 123 MLAVEFDIIQNTELIDINDNHVGIDISSLISSASEPASYYSGNNHRIPILLRSGDPIQAW 182
            + VEFD   N+E  D   +HVGID++S+ S  + P +  SG               +  
Sbjct: 117 FVGVEFDTYSNSEYNDPPTDHVGIDVNSVDSVKTVPWNSVSGAVV------------KVT 164

Query: 183 VDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLI-TASHNVH 241
           V Y S    ++V++            I+  +DL + + E +  GFSAS  L     H + 
Sbjct: 165 VIYDSSTKTLSVAVTN---DNGDITTIAQVVDLKAKLPERVKFGFSASGSLGGRQIHLIR 221

Query: 242 GWS 244
            WS
Sbjct: 222 SWS 224

>1dbn_A MAL, protein (leukoagglutinin); plant lectin, carbohydrate binding, sialyllactose, sugar BIN protein; HET: NAG SIA GAL BGC; 2.75A {Maackia amurensis} SCOP: b.29.1.1 Length = 239

 Score =  186 bits (474), Expect = 4e-55
 Identities = 69/254 (27%), Positives = 115/254 (45%), Gaps = 31/254 (12%)

Query: 6   ADTTSFLYNGFL--HANLSLEGAAYISTSGILTVTNKSEG-----LIGHALYPNPLRFKT 58
           +D  SF  N F+   A+L  +G A +S++G+L +T    G      +G ALY  P+R   
Sbjct: 1   SDELSFTINNFVPNEADLLFQGEASVSSTGVLQLTKVENGQPQKYSVGRALYAAPVRIWG 60

Query: 59  SNKSVAIDFRTNFVFSILPKYPDLGGQGLAFIIISTN-RPENCLANQFLGLPNITMSSST 117
           +       F T+F F +    PD+   GLAF +   + +  +   +++LGL N + S S 
Sbjct: 61  NTTGSVASFSTSFTFVVKAPNPDITSDGLAFYLAPPDSQIPSGSVSKYLGLFNNSNSDS- 119

Query: 118 KFSTRMLAVEFDIIQNTEL--IDINDNHVGIDISSLISSASEPASYYSGNNHRIPIL-LR 174
             S +++AVEFD          D N  H+GID++ + S  +    + +G      I  L 
Sbjct: 120 --SNQIVAVEFDTYFAHSYDPWDPNYRHIGIDVNGIESIKTVQWDWINGGVAFATITYLA 177

Query: 175 SGDPIQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLI 234
               + A + Y S                     ++  +DL  ++ E++  GFSA+TG  
Sbjct: 178 PNKTLIASLVYPS---------------NQTTFSVAASVDLKEILPEWVRVGFSAATGYP 222

Query: 235 TA--SHNVHGWSIS 246
           T   +H+V  WS +
Sbjct: 223 TEVETHDVLSWSFT 236

>1fat_A Phytohemagglutinin-L; glycoprotein, plant defense protein, lectin; HET: NAG; 2.80A {Phaseolus vulgaris} SCOP: b.29.1.1 PDB: 1g8w_A* Length = 252

 Score =  187 bits (475), Expect = 5e-55
 Identities = 67/263 (25%), Positives = 116/263 (44%), Gaps = 34/263 (12%)

Query: 6   ADTTSFLYNGFLHANLSLEGAAYISTSGILTVTNKSEGL------IGHALYPNPLRFKTS 59
           ++   F +  F   NL L+  A +S+SG L +TN +         +G A Y  P++   +
Sbjct: 1   SNDIYFNFQRFNETNLILQRDASVSSSGQLRLTNLNGNGEPRVGSLGRAFYSAPIQIWDN 60

Query: 60  NKSVAIDFRTNFVFSILPKYPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTKF 119
                  F T+F F+I          GLAF ++            FLGL + + S+    
Sbjct: 61  TTGTVASFATSFTFNIQVPNNAGPADGLAFALVPVGSQPKD-KGGFLGLFDGSNSNF--- 116

Query: 120 STRMLAVEFDIIQNTELIDINDNHVGIDISSLISSASEPASYYSGNNHRIPILLRSGDPI 179
               +AVEFD + N +  D  + H+GID++S+ S  +    + +G N             
Sbjct: 117 --HTVAVEFDTLYNKDW-DPTERHIGIDVNSIRSIKTTRWDFVNGENA------------ 161

Query: 180 QAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLITAS-- 237
           +  + Y S   L+  S+      +    ++S  +DL SV+ E++  GFSA+TG+   +  
Sbjct: 162 EVLITYDSSTNLLVASLVYPS--QKTSFIVSDTVDLKSVLPEWVSVGFSATTGINKGNVE 219

Query: 238 -HNVHGWS----ISIGGKAQDLN 255
            ++V  WS    +S    ++ LN
Sbjct: 220 TNDVLSWSFASKLSDETTSEGLN 242

>1hql_A Lectin; xenograft antigen, sugar BI protein; HET: GLA MBG NAG; 2.20A {Griffonia simplicifolia} SCOP: b.29.1.1 PDB: 1gnz_A* Length = 257

 Score =  183 bits (466), Expect = 1e-53
 Identities = 57/269 (21%), Positives = 113/269 (42%), Gaps = 26/269 (9%)

Query: 6   ADTTSFLYNGF---LHANLSLEGAAYISTSGILTVTNKSEGL------IGHALYPNPLRF 56
           +D+ SF +  F   +  ++  +G A   T+G L +   ++         G ALY +P++ 
Sbjct: 2   SDSVSFTFPNFWSDVEDSIIFQGDANT-TAGTLQLCKTNQYGTPLQWSAGRALYSDPVQL 60

Query: 57  KTSNKSVAIDFRTNFVFSILPKYPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSS 116
             +       F T F F +     +    GLAF +   +      A ++LGL N + ++ 
Sbjct: 61  WDNKTESVASFYTEFTFFLKI-TGNGPADGLAFFLAPPDSDVKD-AGEYLGLFNKSTATQ 118

Query: 117 TKFSTRMLAVEFDIIQNTELIDINDNHVGIDISSLISSASEPASYYSGNNHRIPILLRSG 176
              + +++AVEFD   N    + +  H+GI+++S++S A++               + SG
Sbjct: 119 PSKN-QVVAVEFDTWTNPNFPEPSYRHIGINVNSIVSVATKRWEDSD---------IFSG 168

Query: 177 DPIQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLITA 236
               A + Y     ++ V +     P     ++S  +D+   + E +  G SASTG    
Sbjct: 169 KIATARISYDGSAEILTVVLSY---PDGSDYILSHSVDMRQNLPESVRVGISASTGNNQF 225

Query: 237 -SHNVHGWSISIGGKAQDLNPMKVPTLEK 264
            +  +  W  S   ++  +     P + +
Sbjct: 226 LTVYILSWRFSSNLQSTSVKAAMEPEITR 254

>1fx5_A UEA-I, UE-I, anti-H(O) lectin I; legume lectin, HOMO-dimer, fucose specific lectin, SUG binding protein; HET: NAG FUC BMA MAN; 2.20A {Ulex europaeus} SCOP: b.29.1.1 PDB: 1jxn_A* Length = 242

 Score =  182 bits (464), Expect = 1e-53
 Identities = 60/250 (24%), Positives = 99/250 (39%), Gaps = 25/250 (10%)

Query: 6   ADTTSFLYNGFLH--ANLSLEGAAYISTSGILTVT----NKSEGLIGHALYPNPLRFKTS 59
           +D  SF +  F     +LS +G A +  +G+L +     N  +   G A Y  P+     
Sbjct: 1   SDDLSFKFKNFSQNGKDLSFQGNASVIETGVLQLNKVGNNLPDETGGIARYIAPIHIWNC 60

Query: 60  NKSVAIDFRTNFVFSIL-PKYPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTK 118
           N      F T+F F +     P     GL F +   + P    A  + GL N T   S  
Sbjct: 61  NTGELASFITSFSFFMETSANPKAATDGLTFFLAPPDSPLR-RAGGYFGLFNDTKCDS-- 117

Query: 119 FSTRMLAVEFDIIQN-TELIDINDNHVGIDISSLISSASEPASYYSGNNHRIPILLRSGD 177
            S + +AVEFD I +     D    H+GID++ + S  +E  +   G            +
Sbjct: 118 -SYQTVAVEFDTIGSPVNFWDPGFPHIGIDVNCVKSINAERWNKRYGL----------NN 166

Query: 178 PIQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGL-ITA 236
                + Y +    +  S+            ++  +DL  ++ E++  GFS ST +   A
Sbjct: 167 VANVEIIYEASSKTLTASLTYPSDQTSI--SVTSIVDLKEILPEWVSVGFSGSTYIGRQA 224

Query: 237 SHNVHGWSIS 246
           +H V  W  +
Sbjct: 225 THEVLNWYFT 234

>3zyr_A Lectin; sugar binding protein, N-glycan; HET: NAG BMA MAN GOL; 1.65A {Platypodium elegans} PDB: 3zvx_A* 1ukg_A* 1q8o_A* 1q8q_A* 1q8s_A* 1q8v_A* 1q8p_A* 2auy_A* 2gme_A 2gmm_A* 2gmp_A* 2gn3_A* 2gn7_A* 2gnb_A* 2gnd_A* 2gnm_A* 2gnt_A 2phf_A* 2phr_A* 2pht_A* ... Length = 261

 Score =  183 bits (464), Expect = 3e-53
 Identities = 63/251 (25%), Positives = 105/251 (41%), Gaps = 26/251 (10%)

Query: 6   ADTTSFLYNGF--LHANLSLEGAAYISTSGILTVTNKSEG------LIGHALYPNPLRFK 57
            D+ SF +  F     NL  +G A+ S + IL +T            +G  L+   +R  
Sbjct: 9   TDSLSFSFINFDRDERNLIFQGDAHTSRNNILQLTRTDSNGAPVRSTVGRILHSAQVRLW 68

Query: 58  TSNKSVAIDFRTNFVFSILPKYPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSST 117
             + +   + +T F F +     +       FI        +  A   LGL N   + + 
Sbjct: 69  EKSTNRVANLQTQFSFFLSSPLSNPADGIAFFIAPPDTTIPSGSAGGLLGLFNPRTALNE 128

Query: 118 KFSTRMLAVEFDII--QNTELIDINDNHVGIDISSLISSASEPASYYSGNNHRIPILLRS 175
             + ++LAVEFD    QN+   D N  H+GID++S+ SS                   R 
Sbjct: 129 S-ANQVLAVEFDTFFAQNSNTWDPNYQHIGIDVNSIRSSKVVRWE------------RRE 175

Query: 176 GDPIQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLIT 235
           G  +   V Y+     I+V       P   R  +S  +DL++++ E++  GFSA++G   
Sbjct: 176 GKTLNVLVTYNPSTRTIDVV---ATYPDGQRYQLSHVVDLTTILPEWVRVGFSAASGEQF 232

Query: 236 ASHNVHGWSIS 246
            +HN+  WS +
Sbjct: 233 QTHNLESWSFT 243

>1sbf_A Soybean agglutinin; lectin; HET: NAG GAL; 2.43A {Glycine max} SCOP: b.29.1.1 PDB: 1sbd_A* 1sbe_A* 1g9f_A* 2sba_A* Length = 253

 Score =  182 bits (463), Expect = 3e-53
 Identities = 64/265 (24%), Positives = 110/265 (41%), Gaps = 32/265 (12%)

Query: 6   ADTTSFLYNGFLH--ANLSLEGAAYISTSGILTVTNKSEGL------IGHALYPNPLRFK 57
           A+T SF +N F+    N+ L+G A +++SG L +    E        +G ALY  P+   
Sbjct: 1   AETVSFSWNKFVPKQPNMILQGDAIVTSSGKLQLNKVDENGTPKPSSLGRALYSTPIHIW 60

Query: 58  TSNKSVAIDFRTNFVFSILPKYPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSST 117
                    F  +F F+           GLAF +   +         +LGL N   S   
Sbjct: 61  DKETGSVASFAASFNFTFYAPDTKRLADGLAFFLAPIDTKPQ-THAGYLGLFNENESGD- 118

Query: 118 KFSTRMLAVEFDIIQNTELIDINDNHVGIDISSLISSASEPASYYSGNNHRIPILLRSGD 177
               +++AVEFD  +N+   D  + H+GI+++S+ S  +                L +  
Sbjct: 119 ----QVVAVEFDTFRNSW--DPPNPHIGINVNSIRSIKTTSWD------------LANNK 160

Query: 178 PIQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLITA- 236
             +  + Y +   L+  S+      +    ++S  +DL + + E++  GFSA+TGL    
Sbjct: 161 VAKVLITYDASTSLLVASLVYPS--QRTSNILSDVVDLKTSLPEWVRIGFSAATGLDIPG 218

Query: 237 -SHNVHGWSISIGGKAQDLNPMKVP 260
            SH+V  WS +        N   + 
Sbjct: 219 ESHDVLSWSFASNLPHASSNIDPLD 243

>1fny_A BARK lectin, BARK agglutinin I,polypeptide A; legume lectin, jelly roll, sugar binding protein; 1.81A {Robinia pseudoacacia} SCOP: b.29.1.1 PDB: 1fnz_A* Length = 237

 Score =  181 bits (461), Expect = 3e-53
 Identities = 58/255 (22%), Positives = 105/255 (41%), Gaps = 29/255 (11%)

Query: 7   DTTSFLYNGFL--HANLSLEGAAYISTSGILTVTNKSEGL-----IGHALYPNPLRFKTS 59
            + SF +  F      L  +G A ++++G+L +TN   G+     +G ALY  P +   S
Sbjct: 2   GSLSFSFPKFAPNQPYLINQGDALVTSTGVLQLTNVVNGVPSSKSLGRALYAAPFQIWDS 61

Query: 60  NKSVAIDFRTNFVFSILPKYPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTKF 119
                  F T+F F I    P     GLAF +   +          LG+      + +  
Sbjct: 62  TTGNVASFVTSFTFIIQAPNPATTADGLAFFLAPVDTQPLD-LGGMLGIFKDGYFNKSN- 119

Query: 120 STRMLAVEFDIIQNTELIDINDNHVGIDISSLISSASEPASYYSGNNHRIPILLRSGDPI 179
             +++AVEFD   N +  D    H+GI+++S+ S  + P ++ +G               
Sbjct: 120 --QIVAVEFDTFSNGDW-DPKGRHLGINVNSIESIKTVPWNWTNGEVA------------ 164

Query: 180 QAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLITA--- 236
             ++ Y +    +  S+           +I   +D+  V+ E++  GFSA+TG+      
Sbjct: 165 NVFISYEASTKSLTASLVYPS--LETSFIIDAIVDVKIVLPEWVRFGFSATTGIDKGYVQ 222

Query: 237 SHNVHGWSISIGGKA 251
           +++V  WS       
Sbjct: 223 TNDVLSWSFESNLPG 237

>2bqp_A Protein (PEA lectin); D-glucopyranose complex, sugar binding protein; HET: GLC; 1.90A {Pisum sativum} SCOP: b.29.1.1 Length = 234

 Score =  181 bits (460), Expect = 4e-53
 Identities = 63/246 (25%), Positives = 100/246 (40%), Gaps = 23/246 (9%)

Query: 7   DTTSFLYNGFLH--ANLSLEGAAYISTSGILTVTNKSEGLIGHALYPNPLRFKTSNKSVA 64
           +TTSFL   F     NL  +G  Y  T   LT+T   +  +G ALY +P+          
Sbjct: 2   ETTSFLITKFSPDQQNLIFQGDGYT-TKEKLTLTKAVKNTVGRALYSSPIHIWDRETGNV 60

Query: 65  IDFRTNFVFSILPKYPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTKFSTRML 124
            +F T+F F I          G  F I   +         +LG+ N         +T+ +
Sbjct: 61  ANFVTSFTFVINAPNSYNVADGFTFFIAPVDTKPQ-TGGGYLGVFNSAEYDK---TTQTV 116

Query: 125 AVEFDIIQNTELIDIN-DNHVGIDISSLISSASEPASYYSGNNHRIPILLRSGDPIQAWV 183
           AVEFD   N      N D H+GID++S+ S  ++     +G                  +
Sbjct: 117 AVEFDTFYNAAWDPSNRDRHIGIDVNSIKSVNTKSWKLQNGEEA------------NVVI 164

Query: 184 DYSSQEMLINVSICPLG---VPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLITASHNV 240
            +++   ++ VS+         +     +S  + L  V+ E++  GFSA+TG   A+H V
Sbjct: 165 AFNAATNVLTVSLTYPNNSLEEEVTSYTLSDVVSLKDVVPEWVRIGFSATTGAEYAAHEV 224

Query: 241 HGWSIS 246
             WS  
Sbjct: 225 LSWSFH 230

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score =  181 bits (461), Expect = 2e-52
 Identities = 69/306 (22%), Positives = 126/306 (41%), Gaps = 49/306 (16%)

Query: 309 EDWEIQCGARRFKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRI--GHN 366
           +DWEI          ++       G++  +GSG FG VY+G       +VA+K +     
Sbjct: 17  DDWEI-------PDGQIT-----VGQR--IGSGSFGTVYKGKWHG---DVAVKMLNVTAP 59

Query: 367 SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLR 426
           + Q ++ F  E+  + + RH N++   G+     +L +V  +    SL   L    H   
Sbjct: 60  TPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAP-QLAIVTQWCEGSSLYHHL----HASE 114

Query: 427 KLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE 486
                 +   I    A+ + YLH    + ++HRD+K +NI L      K+GDFGLA    
Sbjct: 115 TKFEMKKLIDIARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKS 171

Query: 487 HGANPQT-THIVGTLGYLAPELTR---TGKATTSTDVYSYGILMLEVACGR---RSIEPQ 539
             +       + G++ ++APE+ R   +   +  +DVY++GI++ E+  G+    +I  +
Sbjct: 172 RWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR 231

Query: 540 KAAAELLLVDWVKELHLEGEITQAIDQTL-DYYDLAEAELVLNLGLFCSAPNPVYRPDMR 598
               E+     V    L  ++++           L            C       RP   
Sbjct: 232 DQIIEM-----VGRGSLSPDLSKVRSNCPKRMKRLMAE---------CLKKKRDERPSFP 277

Query: 599 RVVEFL 604
           R++  +
Sbjct: 278 RILAEI 283

>2eig_A Lectin; L-fucosyl, N-acetyl-D-glucosamine, SUG binding protein; HET: NAG; 2.00A {Lotus tetragonolobus} Length = 234

 Score =  179 bits (454), Expect = 3e-52
 Identities = 63/249 (25%), Positives = 99/249 (39%), Gaps = 24/249 (9%)

Query: 10  SFLYNGFLH-ANLSLEGAAYISTSGILTVTNKS--EGLIGHALYPNPLRFKTSNKSVAID 66
           SF Y  F    +L  +G A I T G L +           HALY  P+    S       
Sbjct: 2   SFNYTRFKDDGSLIFQGDAKIWTDGRLAMPTDPLVNRTTSHALYATPVPIWDSATGNVAS 61

Query: 67  FRTNFVFSILPKYPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTKFSTRMLAV 126
           F T+F F +          G+ F +           N   G   IT SS++    + +AV
Sbjct: 62  FITSFSFIVSNVQRYPPTDGVVFFLAPWG--TEIPPNSQGGYLGITDSSNS--QNQFVAV 117

Query: 127 EFDIIQNT-ELIDINDNHVGIDISSLISSASEPASYYSGNNHRIPILLRSGDPIQAWVDY 185
           EFD   N  +   +  +H+GID++S++S  +   +              SG   +A + Y
Sbjct: 118 EFDSHPNVWDPKSLRSSHIGIDVNSIMSLKAVNWN------------RVSGSLEKATIIY 165

Query: 186 SSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSAST-GLITASHNVHGWS 244
            S   ++ V +            IS  IDL +V+ E +  GFSA+T       H+++ WS
Sbjct: 166 DSDTKILTVVMTH---QNGQITTISQEIDLKTVLPEKVSVGFSATTWNPERERHDIYSWS 222

Query: 245 ISIGGKAQD 253
            +   K  +
Sbjct: 223 FTSTLKEPE 231

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score =  181 bits (462), Expect = 3e-52
 Identities = 68/312 (21%), Positives = 124/312 (39%), Gaps = 54/312 (17%)

Query: 308 LEDWEIQCGARRFKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRI--GH 365
           L++W+I        + +L       GE   +G G FG+VY G       EVAI+ I    
Sbjct: 25  LQEWDI-------PFEQLE-----IGEL--IGKGRFGQVYHGRWHG---EVAIRLIDIER 67

Query: 366 NSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKL 425
           +++  +K F  E+M+  + RH N+V   G C     L ++       +L  ++       
Sbjct: 68  DNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVV----RDA 123

Query: 426 RKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKI- 484
           + +L  ++  +I   I + + YLH    + ++H+D+K  N+  D      + DFGL  I 
Sbjct: 124 KIVLDVNKTRQIAQEIVKGMGYLH---AKGILHKDLKSKNVFYD-NGKVVITDFGLFSIS 179

Query: 485 ---YEHGANPQTTHIVGTLGYLAPELTRTGKA---------TTSTDVYSYGILMLEVACG 532
                     +     G L +LAPE+ R             +  +DV++ G +  E+   
Sbjct: 180 GVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAR 239

Query: 533 RRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPV 592
               + Q A A +  +         G         +        + + ++ LFC A    
Sbjct: 240 EWPFKTQPAEAIIWQMG-------TGMKPNLSQIGMG-------KEISDILLFCWAFEQE 285

Query: 593 YRPDMRRVVEFL 604
            RP   ++++ L
Sbjct: 286 ERPTFTKLMDML 297

>1avb_A Arcelin-1; lectin-like glycoprotein, plant defense, insecticidal activi lectin; HET: NAG; 1.90A {Phaseolus vulgaris} SCOP: b.29.1.1 Length = 226

 Score =  178 bits (452), Expect = 5e-52
 Identities = 63/245 (25%), Positives = 103/245 (42%), Gaps = 31/245 (12%)

Query: 6   ADTTSFLYNGFLHANLSLEGAAYISTSGILTVTNKS---EGLIGHALYPNPLRFKTSNKS 62
           ++  SF    F   NL L+G A +S+ G L +TN     E  +G A Y  P++       
Sbjct: 1   SNDASFNVETFNKTNLILQGDATVSSEGHLLLTNVKGNEEDSMGRAFYSAPIQINDRTID 60

Query: 63  VAIDFRTNFVFSILPKYPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTKFSTR 122
               F TNF F I  K  +    GLAF ++        L  ++LGL N T          
Sbjct: 61  NLASFSTNFTFRINAKNIENSAYGLAFALVPVGSRPK-LKGRYLGLFNTTNYDR---DAH 116

Query: 123 MLAVEFDIIQNTELIDINDNHVGIDISSLISSASEPASYYSGNNHRIPILLRSGDPIQAW 182
            +AV F         D   N + ID++S+   A+E  ++             +G+  +  
Sbjct: 117 TVAVVF---------DTVSNRIEIDVNSIRPIATESCNFG----------HNNGEKAEVR 157

Query: 183 VDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGL---ITASHN 239
           + Y S +  + VS+         +  +S  + L   +++++  GFSA++G     T +HN
Sbjct: 158 ITYDSPKNDLRVSLLY--PSSEEKCHVSATVPLEKEVEDWVSVGFSATSGSKKETTETHN 215

Query: 240 VHGWS 244
           V  WS
Sbjct: 216 VLSWS 220

>1g7y_A Stem/LEAF lectin DB58; jelly roll fold, sugar binding protein; HET: NAG FUC FUL; 2.50A {Vigna unguiculata subsp} SCOP: b.29.1.1 PDB: 1lul_A 1lu1_A* 1bjq_A* 1lu2_A* Length = 253

 Score =  179 bits (454), Expect = 5e-52
 Identities = 61/264 (23%), Positives = 114/264 (43%), Gaps = 33/264 (12%)

Query: 6   ADTTSFLYNGFLHANLSLEGAAYISTSGILTVTNKSEG------LIGHALYPNPLRFKTS 59
           AD  SF +  F  ++  L+G A + +S  L +T            +G A Y +P++    
Sbjct: 1   ADIQSFSFKNFNSSSFILQGDATV-SSSKLRLTKVKGNGLPTLSSLGRAFYSSPIQIYDK 59

Query: 60  NKSVAIDFRTNFVFSILPKYPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTKF 119
           +      + T+F  +I          G+AF ++          + FLG+ +  +  +   
Sbjct: 60  STGAVASWATSFTANIFAPNKSSSADGIAFALVPVGSEPKS-NSGFLGVFDSDVYDN--- 115

Query: 120 STRMLAVEFDIIQNTELIDINDNHVGIDISSLISSASEPASYYSGNNHRIPILLRSGDPI 179
           S + +AVEFD   NT+  D    H+GID++S+ S  +      +G N             
Sbjct: 116 SAQTVAVEFDTFSNTD-WDPTSRHIGIDVNSIKSIRTASWGLANGQNA------------ 162

Query: 180 QAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGL---ITA 236
           +  + Y++   L+  S+      +    ++S  +D+++ + EY+  GFSA+TGL    T 
Sbjct: 163 EILITYNAATSLLVASLV--HPSRRTSYIVSERVDITNELPEYVSIGFSATTGLSEGYTE 220

Query: 237 SHNVHGWS----ISIGGKAQDLNP 256
           +H+V  WS    +      + L+ 
Sbjct: 221 THDVLSWSFASKLPDDSTTEPLDI 244

>1wbf_A Protein (agglutinin); lectin (agglutinin), legume lectin, protein crystallography, group specificity, saccharide free form; HET: NAG; 2.30A {Psophocarpus tetragonolobus} SCOP: b.29.1.1 PDB: 2d3s_A* 2dtw_A* 1wbl_A* 2dty_A* 2du0_A* 2du1_A* 2e51_A* 2e53_A* 2zmk_A* 2zml_A* 2zmn_A* 2e7t_A* 2e7q_A* Length = 242

 Score =  178 bits (453), Expect = 5e-52
 Identities = 68/261 (26%), Positives = 106/261 (40%), Gaps = 38/261 (14%)

Query: 8   TTSFLYNGFL--HANLSLEGAAYISTSGILTVTNKSEGL-----IGHALYPNPLRFKTSN 60
           T SF +N F      L L+  A IS++ +L +T    G+      G ALY  P++   S 
Sbjct: 3   TISFNFNQFHQNEEQLKLQRDARISSNSVLELTKVVNGVPTWNSTGRALYAKPVQVWDST 62

Query: 61  KSVAIDFRTNFVFSILPKYP-DLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTKF 119
                 F T F FSI   +P      GL F I   N         + G+ N         
Sbjct: 63  TGNVASFETRFSFSIRQPFPRPHPADGLVFFIAPPNTQTGE-GGGYFGIYNPLSPY---- 117

Query: 120 STRMLAVEFDIIQNTELIDINDNHVGIDISSLISSASEPASYYSGNNHRIPILLRSGDPI 179
               +AVEFD  +NT   D    H+GID++S+IS+ + P +            L +G   
Sbjct: 118 --PFVAVEFDTFRNTW--DPQIPHIGIDVNSVISTKTVPFT------------LDNGGIA 161

Query: 180 QAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLITA--- 236
              + Y +   +++V +            I+  +DL  V+ E +  GFSA+TG  +    
Sbjct: 162 NVVIKYDASTKILHVVLVF--PSLGTIYTIADIVDLKQVLPESVNVGFSAATGDPSGKQR 219

Query: 237 ----SHNVHGWSISIGGKAQD 253
               +H++  WS S      +
Sbjct: 220 NATETHDILSWSFSASLPGTN 240

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score =  177 bits (452), Expect = 2e-51
 Identities = 47/306 (15%), Positives = 111/306 (36%), Gaps = 53/306 (17%)

Query: 309 EDWEIQCGARRFKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRI--GHN 366
           +   I        + +L      F  +  +     G +++G     G ++ +K +     
Sbjct: 3   KHSGI-------DFKQLN-----FLTK--LNENHSGELWKGRW--QGNDIVVKVLKVRDW 46

Query: 367 SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRK--QDELLLVYDYVPNGSLDKLLFDKDHK 424
           S +  ++F  E   +    H N++ + G C+        L+  ++P GSL  +L +  + 
Sbjct: 47  STRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNF 106

Query: 425 LRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKI 484
           +   +   Q  K  + +A+ + +LH      +    +   ++++D  + A++    +   
Sbjct: 107 V---VDQSQAVKFALDMARGMAFLHT-LEPLIPRHALNSRSVMIDEDMTARISMADVKFS 162

Query: 485 YEHGANPQTTHIVGTLGYLAPELTRTGKATTST---DVYSYGILMLEVACGR---RSIEP 538
           +      Q+   +    ++APE  +     T+    D++S+ +L+ E+         +  
Sbjct: 163 F------QSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSN 216

Query: 539 QKAAAELLLVDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMR 598
            +          V    L   I   I   +       ++L+      C   +P  RP   
Sbjct: 217 MEIGM------KVALEGLRPTIPPGISPHV-------SKLMKI----CMNEDPAKRPKFD 259

Query: 599 RVVEFL 604
            +V  L
Sbjct: 260 MIVPIL 265

>1qnw_A Chitin binding lectin, UEA-II; carbohydrate binding; HET: NAG; 2.35A {Ulex europaeus} SCOP: b.29.1.1 PDB: 1dzq_A* 1qoo_A* 1qos_A* 1qot_A* Length = 242

 Score =  174 bits (441), Expect = 3e-50
 Identities = 59/257 (22%), Positives = 109/257 (42%), Gaps = 26/257 (10%)

Query: 6   ADTTSFLYNGFL--HANLSLEGAAYISTSGILTVTNKSEGL---IGHALYPNPLRFKTSN 60
           +D  SF ++ F+    N+  +G A +ST+G+L VT  S+     IG ALY  P++   S 
Sbjct: 3   SDDLSFNFDKFVPNQKNIIFQGDASVSTTGVLQVTKVSKPTTTSIGRALYAAPIQIWDSI 62

Query: 61  KSVAIDFRTNFVFSILPKYPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTKFS 120
                 F T+F F +     D       F+  + ++  +  +    GL + + S S   S
Sbjct: 63  TGKVASFATSFSFVVKADKSDGVDGLAFFLAPANSQIPSGSSAGMFGLFSSSDSKS---S 119

Query: 121 TRMLAVEFDIIQNTEL--IDINDNHVGIDISSLISSASEPASYYSGNNHRIPILLRSGDP 178
            +++AVEFD          D +  H+GID++S+ S  +    + +G              
Sbjct: 120 NQIIAVEFDTYFGKAYNPWDPDFKHIGIDVNSIKSIKTVKWDWRNGEVA----------- 168

Query: 179 IQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLITA-- 236
               + Y +    + V +           +I+  +DL +++ E++  GFS   G      
Sbjct: 169 -DVVITYRAPTKSLTVCLSYPS--DGTSNIITASVDLKAILPEWVSVGFSGGVGNAAEFE 225

Query: 237 SHNVHGWSISIGGKAQD 253
           +H+V  W  +   +A +
Sbjct: 226 THDVLSWYFTSNLEANN 242

>1gzc_A Erythrina crista-galli lectin; carbohydrate, sugar binding protein, saccharide, protein-carbohydrate interactions, lactose, glycoprotein; HET: LAT; 1.58A {Erythrina crista-galli} SCOP: b.29.1.1 PDB: 1gz9_A* 1fyu_A* 1ax0_A* 1ax1_A* 1ax2_A* 1axy_A* 1axz_A* 1lte_A* 1sfy_A* 1v00_A* 1uzz_A 1uzy_A* 3n35_A* 3n36_A* 3n3h_A* Length = 239

 Score =  173 bits (440), Expect = 3e-50
 Identities = 65/250 (26%), Positives = 106/250 (42%), Gaps = 31/250 (12%)

Query: 7   DTTSFLYNGFLHA--NLSLEGAAYISTSGILTVTNKSEG------LIGHALYPNPLRFKT 58
           +T SF ++ F     NL+L+GAA I+ SG+L +T  ++         G  LY  P+    
Sbjct: 2   ETISFSFSEFEPGNDNLTLQGAALITQSGVLQLTKINQNGMPAWDSTGRTLYTKPVHMWD 61

Query: 59  SNKSVAIDFRTNFVFSILPKYP-DLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSST 117
           S       F T F FSI   Y   L   GL F +  T          +LG+ N +   + 
Sbjct: 62  STTGTVASFETRFSFSIEQPYTRPLPADGLVFFMGPTKSKPA-QGYGYLGVFNNSKQDN- 119

Query: 118 KFSTRMLAVEFDIIQNTELIDINDNHVGIDISSLISSASEPASYYSGNNHRIPILLRSGD 177
             S + LAVEFD   N         H+GID++S+ S  ++P              L +G 
Sbjct: 120 --SYQTLAVEFDTFSNPW-DPPQVPHIGIDVNSIRSIKTQPFQ------------LDNGQ 164

Query: 178 PIQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGL---I 234
                + Y +   +++V +            I+  +D+  V+ +++  G S +TG     
Sbjct: 165 VANVVIKYDAPSKILHVVLVYPS--SGAIYTIAEIVDVKQVLPDWVDVGLSGATGAQRDA 222

Query: 235 TASHNVHGWS 244
             +H+V+ WS
Sbjct: 223 AETHDVYSWS 232

>1n47_A Isolectin B4; cancer antigen, vicia villosa lectin, glycoprotein TN-bindin protein, carbohydrate recognition, sugar binding protein; HET: NAG FUC TNR; 2.70A {Vicia villosa} SCOP: b.29.1.1 Length = 233

 Score =  172 bits (437), Expect = 8e-50
 Identities = 62/248 (25%), Positives = 102/248 (41%), Gaps = 32/248 (12%)

Query: 7   DTTSFLYNGFLH--ANLSLEGAAYISTSGILTVTNKSEGL-----IGHALYPNPLRFKTS 59
           ++TSF +  F     NL L+  A ++++G L +T  + G      +G ALY  P+     
Sbjct: 2   ESTSFSFTNFNPNQNNLILQEDALVNSAGTLELTAVAAGAPVPDSLGRALYAAPIHIH-- 59

Query: 60  NKSVAIDFRTNFVFSILPKYPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTKF 119
           + +    F T+F F +          GLAF +   +         FLGL       +   
Sbjct: 60  DNTTLASFTTSFSFVMAAPAAAAVADGLAFFLAPPDTQPQA-RGGFLGLFADRAHDA--- 115

Query: 120 STRMLAVEFDIIQNTELIDINDNHVGIDISSLISSASEPASYYSGNNHRIPILLRSGDPI 179
           S + +AVEFD   N    D N  H+GID + + S  + P              +  G+  
Sbjct: 116 SYQTVAVEFDTYSNAW--DPNYTHIGIDTNGIESKKTTPFD------------MVYGEKA 161

Query: 180 QAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLITA--- 236
              + Y +    +  S+            +S  +DL  ++ EY+  GFSA+TGL      
Sbjct: 162 NIVITYQASTKALAASLV--FPVSQTSYAVSARVDLRDILPEYVRVGFSATTGLNAGVVE 219

Query: 237 SHNVHGWS 244
           +H++  WS
Sbjct: 220 THDIVSWS 227

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score =  173 bits (441), Expect = 2e-49
 Identities = 58/224 (25%), Positives = 90/224 (40%), Gaps = 31/224 (13%)

Query: 335 QNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAE--IMSMGRLRHRNLVQL 392
              VG G +G V+RG     G  VA+K     S +  K +  E  + +   LRH N++  
Sbjct: 13  LECVGKGRYGEVWRGSW--QGENVAVKIF---SSRDEKSWFRETELYNTVMLRHENILGF 67

Query: 393 HGWCRKQD----ELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYL 448
                       +L L+  Y   GSL   L  +   L          +I++ IA  L +L
Sbjct: 68  IASDMTSRHSSTQLWLITHYHEMGSLYDYL--QLTTL----DTVSCLRIVLSIASGLAHL 121

Query: 449 HEE-----CNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQ---TTHIVGTL 500
           H E         + HRD+K  NIL+       + D GLA ++    N         VGT 
Sbjct: 122 HIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTK 181

Query: 501 GYLAPEL------TRTGKATTSTDVYSYGILMLEVACGRRSIEP 538
            Y+APE+           +    D++++G+++ EVA    S   
Sbjct: 182 RYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGI 225

>1gsl_A Griffonia simplicifolia lectin 4; glycoprotein, manganese; HET: FUC GAL MAG NAG BMA; 2.00A {Griffonia simplicifolia} SCOP: b.29.1.1 PDB: 1lec_A* 1led_A* Length = 243

 Score =  171 bits (434), Expect = 2e-49
 Identities = 56/252 (22%), Positives = 93/252 (36%), Gaps = 30/252 (11%)

Query: 7   DTTSFLYNGFLH------ANLSLEGAAYISTSGILTVT------NKSEGLIGHALYPNPL 54
           +T +F Y  F          ++  G A     G L +T      N      G A Y  P+
Sbjct: 2   NTVNFTYPDFWSYSLKNGTEITFLGDATR-IPGALQLTKTDANGNPVRSSAGQASYSEPV 60

Query: 55  RFKTSNKSVAIDFRTNFVFSILPKYPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMS 114
               S    A  F T+F F +   Y      GLAF +   +         FLGL     +
Sbjct: 61  FLWDSTGKAAS-FYTSFTFLL-KNYGAPTADGLAFFLAPVDSSVKD-YGGFLGLFRHETA 117

Query: 115 SSTKFSTRMLAVEFDIIQNTELIDINDNHVGIDISSLISSASEPASYYSGNNHRIPILLR 174
           +    + +++AVEFD   N +  D    H+GID++S++S A+                  
Sbjct: 118 ADPSKN-QVVAVEFDTWINKDWNDPPYPHIGIDVNSIVSVATTRWENDDAYGS------- 169

Query: 175 SGDPIQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLI 234
                 A + Y ++  ++ V +           ++S  +DL+ V+ + +  GFSA  G  
Sbjct: 170 --SIATAHITYDARSKILTVLL---SYEHGRDYILSHVVDLAKVLPQKVRIGFSAGVGY- 223

Query: 235 TASHNVHGWSIS 246
                +  W   
Sbjct: 224 DEVTYILSWHFF 235

>1ioa_A Arcelin-5A, ARC5A; lectin-like proteins, plant defense proteins, lectin; HET: NAG FUC; 2.70A {Phaseolus vulgaris} SCOP: b.29.1.1 Length = 240

 Score =  170 bits (431), Expect = 7e-49
 Identities = 66/260 (25%), Positives = 105/260 (40%), Gaps = 37/260 (14%)

Query: 6   ADTTSFLYNGF-LHANLSLEGAAYISTSGILTVTNKSEG------LIGHALYPNPLRFKT 58
           A  TSF +  F     L L+G A IS+ G L +T            +G A Y +P++ K 
Sbjct: 1   ATETSFNFPNFHTDDKLILQGNATISSKGQLQLTGVGSNELPRVDSLGRAFYSDPIQIKD 60

Query: 59  SNKSVAIDFRTNFVFSILPKYPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTK 118
           SN   + +  TNF F I  K   +   GLAF ++  N P      +FLG+ N        
Sbjct: 61  SNNVASFN--TNFTFIIRAKNQSISAYGLAFALVPVNSPPQ-KKQEFLGIFNTNNPEP-- 115

Query: 119 FSTRMLAVEFDIIQNTELIDINDNHVGIDISSLISSASEPASYYSGNNHRIPILLRSGDP 178
            + R +AV F+  +N   ID + N +   +                 N        +G+ 
Sbjct: 116 -NARTVAVVFNTFKNR--IDFDKNFIKPYV-----------------NENCDFHKYNGEK 155

Query: 179 IQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGL---IT 235
               + Y S    + V +         +  +S  + L   +DE++  GFS ++GL    T
Sbjct: 156 TDVQITYDSSNNDLRVFLHF--TVSQVKCSVSATVHLEKEVDEWVSVGFSPTSGLTEDTT 213

Query: 236 ASHNVHGWSISIGGKAQDLN 255
            +H+V  WS S   + +  N
Sbjct: 214 ETHDVLSWSFSSKFRNKLSN 233

>1f9k_A Acidic lectin; legume lectin, glycosylated protein, H-antigenic specificity agglutinin, sugar binding protein; HET: NAG MAN AMG; 3.00A {Psophocarpus tetragonolobus} SCOP: b.29.1.1 PDB: 1fay_A* Length = 238

 Score =  169 bits (430), Expect = 7e-49
 Identities = 65/261 (24%), Positives = 105/261 (40%), Gaps = 37/261 (14%)

Query: 7   DTTSFLYNGFLH--ANLSLEGAAYISTSGILTVTNKSEG------LIGHALYPNPLRFKT 58
           +T SF ++ F      L+L+  A I ++G+L +T  ++         G ALY  P++   
Sbjct: 1   ETQSFNFDHFEENSKELNLQRQASIKSNGVLELTKLTKNGVPVWKSTGRALYAEPIKIWD 60

Query: 59  SNKSVAIDFRTNFVFSILPKYPD-LGGQGLAFIIISTNRPENCLANQFLGLPNITMSSST 117
           S       F T F F+I   Y       GL F ++  N P+       LG+       + 
Sbjct: 61  STTGNVASFETRFSFNITQPYAYPEPADGLTFFMVPPNSPQG-EDGGNLGVFKPPEGDNA 119

Query: 118 KFSTRMLAVEFDIIQNTELIDINDNHVGIDISSLISSASEPASYYSGNNHRIPILLRSGD 177
                  AVEFD  QNT   D    H+GID++S++SS +                L +G 
Sbjct: 120 ------FAVEFDTFQNTW--DPQVPHIGIDVNSIVSSKTLHFQ------------LENGG 159

Query: 178 PIQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVI--DEYMYTGFSASTGLIT 235
                + Y S   ++NV +    V       +S  +DL       E++  G SA+TG   
Sbjct: 160 VANVVIKYDSPTKILNVVLAFHSVGTV--YTLSNIVDLKQEFPNSEWVNVGLSATTGYQK 217

Query: 236 AS---HNVHGWSISIGGKAQD 253
            +   H +  WS +   +  +
Sbjct: 218 NAVETHEIISWSFTSSLQETN 238

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score =  171 bits (436), Expect = 2e-48
 Identities = 56/218 (25%), Positives = 83/218 (38%), Gaps = 31/218 (14%)

Query: 335 QNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFV--AEIMSMGRLRHRNLVQL 392
              +G G +G V+ G     G +VA+K            +    EI     +RH N++  
Sbjct: 42  VKQIGKGRYGEVWMGKW--RGEKVAVKVF---FTTEEASWFRETEIYQTVLMRHENILGF 96

Query: 393 HGWCRK----QDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYL 448
                K      +L L+ DY  NGSL   L  K   L          K+       L +L
Sbjct: 97  IAADIKGTGSWTQLYLITDYHENGSLYDYL--KSTTL----DAKSMLKLAYSSVSGLCHL 150

Query: 449 HEE-----CNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQ---TTHIVGTL 500
           H E         + HRD+K  NIL+       + D GLA  +    N         VGT 
Sbjct: 151 HTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTK 210

Query: 501 GYLAPEL------TRTGKATTSTDVYSYGILMLEVACG 532
            Y+ PE+          ++    D+YS+G+++ EVA  
Sbjct: 211 RYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARR 248

>1dhk_B Bean lectin-like inhibitor, porcine pancreatic alpha-amylase; CO (hydrolase-inhibitor), complex (hydrolase-inhibitor) comple; HET: NAG; 1.85A {Phaseolus vulgaris} SCOP: b.29.1.1 PDB: 1viw_B* Length = 223

 Score =  166 bits (422), Expect = 7e-48
 Identities = 52/242 (21%), Positives = 92/242 (38%), Gaps = 46/242 (19%)

Query: 6   ADTTSFLYNGFLHANLSLEGAAYISTSGILTVTNKSEGLIGHALYPNPLRFKTSNKSVAI 65
           A  TSF+ + F   NL L+G A +S++G L ++  S   +  A Y  P++ + S      
Sbjct: 1   ATETSFIIDAFNKTNLILQGDATVSSNGNLQLSYNSYDSMSRAFYSAPIQIRDSTTGNVA 60

Query: 66  DFRTNFVFSILPKYPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTKFSTRMLA 125
            F TNF  +I          GL F+++                         +     + 
Sbjct: 61  SFDTNFTMNIRTHRQANSAVGLDFVLVPVQ---------------------PESKGDTVT 99

Query: 126 VEFDIIQNTELIDINDNHVGIDISSLISSASEPASYYSGNNHRIPILLRSGDPIQAWVDY 185
           VEFD   +   ID+N+N +                     +    +    G   +  + Y
Sbjct: 100 VEFDTFLSRISIDVNNNDI--------------------KSVPWDVHDYDGQNAEVRITY 139

Query: 186 SSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLITAS---HNVHG 242
           +S   + +VS+      K     +S  ++L   + +++  GFSA++G    S   H+V  
Sbjct: 140 NSSTKVFSVSLSNPSTGKSN--NVSTTVELEKEVYDWVSVGFSATSGAYQWSYETHDVLS 197

Query: 243 WS 244
           WS
Sbjct: 198 WS 199

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score =  169 bits (431), Expect = 1e-47
 Identities = 75/301 (24%), Positives = 118/301 (39%), Gaps = 47/301 (15%)

Query: 335 QNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAE--IMSMGRLRHRNLVQL 392
           Q  +G G FG V+RG     G EVA+K     S +  + +  E  I     LRH N++  
Sbjct: 47  QESIGKGRFGEVWRGKW--RGEEVAVKIF---SSREERSWFREAEIYQTVMLRHENILGF 101

Query: 393 HGWCRKQD----ELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYL 448
                K +    +L LV DY  +GSL   L    + +    T +   K+ +  A  L +L
Sbjct: 102 IAADNKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTV----TVEGMIKLALSTASGLAHL 155

Query: 449 HEE-----CNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQT---THIVGTL 500
           H E         + HRD+K  NIL+       + D GLA  ++   +       H VGT 
Sbjct: 156 HMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTK 215

Query: 501 GYLAPEL------TRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKEL 554
            Y+APE+       +  ++    D+Y+ G++  E+A  R SI       +L   D V   
Sbjct: 216 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIAR-RCSIGGIHEDYQLPYYDLVPSD 274

Query: 555 HLEGEITQA---------IDQTLDYYDLAE--AELVLNLGLFCSAPNPVYRPDMRRVVEF 603
               E+ +          I       +     A+++      C   N   R    R+ + 
Sbjct: 275 PSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRE----CWYANGAARLTALRIKKT 330

Query: 604 L 604
           L
Sbjct: 331 L 331

>2ltn_A PEA lectin, alpha chain; 1.70A {Pisum sativum} SCOP: b.29.1.1 PDB: 1bqp_A* 1hkd_A 1ofs_A* 1rin_A* 1lof_C* 1len_A 1lem_A 1les_A* 2lal_A 1loe_A 1loa_A* 1loc_A* 1lod_A* 1lob_A 1lof_A* 1log_A* 1lgc_A* 1lgb_A* 2b7y_A* Length = 181

 Score =  149 bits (376), Expect = 6e-42
 Identities = 49/193 (25%), Positives = 80/193 (41%), Gaps = 20/193 (10%)

Query: 7   DTTSFLYNGFL--HANLSLEGAAYISTSGILTVTNKSEGLIGHALYPNPLRFKTSNKSVA 64
           +TTSFL   F     NL  +G  Y  T   LT+T   +  +G ALY +P+          
Sbjct: 2   ETTSFLITKFSPDQQNLIFQGDGYT-TKEKLTLTKAVKNTVGRALYSSPIHIWDRETGNV 60

Query: 65  IDFRTNFVFSILPKYPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTKFSTRML 124
            +F T+F F I          G  F I   +         +LG+ N         +T+ +
Sbjct: 61  ANFVTSFTFVINAPNSYNVADGFTFFIAPVDTKPQ-TGGGYLGVFNSAEYDK---TTQTV 116

Query: 125 AVEFDIIQNTELIDIN-DNHVGIDISSLISSASEPASYYSGNNHRIPILLRSGDPIQAWV 183
           AVEFD   N      N D H+GID++S+ S  ++               L++G+     +
Sbjct: 117 AVEFDTFYNAAWDPSNRDRHIGIDVNSIKSVNTKSWK------------LQNGEEANVVI 164

Query: 184 DYSSQEMLINVSI 196
            +++   ++ VS+
Sbjct: 165 AFNAATNVLTVSL 177

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score =  150 bits (380), Expect = 6e-41
 Identities = 68/203 (33%), Positives = 102/203 (50%), Gaps = 13/203 (6%)

Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWC 396
           ++G G +G VY G   S  + +AIK I     +  +    EI     L+H+N+VQ  G  
Sbjct: 29  VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 88

Query: 397 RKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRY--KILIGIAQSLLYLHEECNQ 454
            +   + +  + VP GSL  LL  K   L+        Y  +IL G    L YLH+    
Sbjct: 89  SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEG----LKYLHD---N 141

Query: 455 RVVHRDVKPSNILLDTYL-NAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGK- 512
           ++VHRD+K  N+L++TY    K+ DFG +K    G NP T    GTL Y+APE+   G  
Sbjct: 142 QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLA-GINPCTETFTGTLQYMAPEIIDKGPR 200

Query: 513 -ATTSTDVYSYGILMLEVACGRR 534
               + D++S G  ++E+A G+ 
Sbjct: 201 GYGKAADIWSLGCTIIEMATGKP 223

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score =  149 bits (378), Expect = 2e-40
 Identities = 51/203 (25%), Positives = 100/203 (49%), Gaps = 8/203 (3%)

Query: 335 QNLVGSGGFGRVYRGLMPSLGLEVAIKRI---GHNSQQGMKEFVAEIMSMGRLRHRNLVQ 391
           +  +G G F  VYR      G+ VA+K++        +   + + EI  + +L H N+++
Sbjct: 37  EKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIK 96

Query: 392 LHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEE 451
            +    + +EL +V +    G L +++     K ++L+     +K  + +  +L ++H  
Sbjct: 97  YYASFIEDNELNIVLELADAGDLSRMI-KHFKKQKRLIPERTVWKYFVQLCSALEHMHS- 154

Query: 452 CNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTG 511
             +RV+HRD+KP+N+ +      KLGD GL + +        + +VGT  Y++PE     
Sbjct: 155 --RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHS-LVGTPYYMSPERIHEN 211

Query: 512 KATTSTDVYSYGILMLEVACGRR 534
                +D++S G L+ E+A  + 
Sbjct: 212 GYNFKSDIWSLGCLLYEMAALQS 234

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score =  145 bits (369), Expect = 2e-39
 Identities = 56/206 (27%), Positives = 98/206 (47%), Gaps = 21/206 (10%)

Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRI--GHNSQQGMKEFVAEIMSMGRLRHRNLVQLHG 394
            +G G F  VY+GL     +EVA   +     ++   + F  E   +  L+H N+V+ + 
Sbjct: 33  EIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYD 92

Query: 395 ----WCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRY--KILIGIAQSLLYL 448
                 + +  ++LV + + +G+L   L  K  K+ K+    + +  +IL G    L +L
Sbjct: 93  SWESTVKGKKCIVLVTELMTSGTLKTYL--KRFKVMKIKVL-RSWCRQILKG----LQFL 145

Query: 449 HEECNQRVVHRDVKPSNILLDTYL-NAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
           H      ++HRD+K  NI +     + K+GD GLA +           ++GT  ++APE+
Sbjct: 146 H-TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR---ASFAKAVIGTPEFMAPEM 201

Query: 508 TRTGKATTSTDVYSYGILMLEVACGR 533
                   S DVY++G+ MLE+A   
Sbjct: 202 YEEK-YDESVDVYAFGMCMLEMATSE 226

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score =  146 bits (370), Expect = 5e-39
 Identities = 51/202 (25%), Positives = 89/202 (44%), Gaps = 9/202 (4%)

Query: 335 QNLVGSGGFGRVYRGLMPSLGLEVAIKRI--GHNSQQGMKEFVAEIMSMGRLRHRNLVQL 392
              +G G FG+         G +  IK I     S +  +E   E+  +  ++H N+VQ 
Sbjct: 29  LQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQY 88

Query: 393 HGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEEC 452
                +   L +V DY   G L K +     K   L   DQ     + I  +L ++H+  
Sbjct: 89  RESFEENGSLYIVMDYCEGGDLFKRI--NAQK-GVLFQEDQILDWFVQICLALKHVHD-- 143

Query: 453 NQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGK 512
            ++++HRD+K  NI L      +LGDFG+A++            +GT  YL+PE+     
Sbjct: 144 -RKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARA-CIGTPYYLSPEICENKP 201

Query: 513 ATTSTDVYSYGILMLEVACGRR 534
               +D+++ G ++ E+   + 
Sbjct: 202 YNNKSDIWALGCVLYELCTLKH 223

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score =  146 bits (370), Expect = 8e-39
 Identities = 47/196 (23%), Positives = 83/196 (42%), Gaps = 15/196 (7%)

Query: 339 GSGGFGRVYRGLMPSLGLEVAIKRI-GHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           G G FG V+ G + +    VA+K            +F+ E   + +  H N+V+L G C 
Sbjct: 123 GRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCT 182

Query: 398 KQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVV 457
           ++  + +V + V  G     L  +  +    L      +++   A  + YL     +  +
Sbjct: 183 QKQPIYIVMELVQGGDFLTFLRTEGAR----LRVKTLLQMVGDAAAGMEYLES---KCCI 235

Query: 458 HRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGY----LAPELTRTGKA 513
           HRD+   N L+      K+ DFG+++    G         G         APE    G+ 
Sbjct: 236 HRDLAARNCLVTEKNVLKISDFGMSREEADG---VYAASGGLRQVPVKWTAPEALNYGRY 292

Query: 514 TTSTDVYSYGILMLEV 529
           ++ +DV+S+GIL+ E 
Sbjct: 293 SSESDVWSFGILLWET 308

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score =  140 bits (354), Expect = 2e-37
 Identities = 53/219 (24%), Positives = 103/219 (47%), Gaps = 28/219 (12%)

Query: 332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQ 391
           F E  L+GSGGFG+V++      G    IKR+ +N+++  +E   + ++  +L H N+V 
Sbjct: 13  FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAERE--VKALA--KLDHVNIVH 68

Query: 392 LHG----------------WCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRY 435
            +G                   K   L +  ++   G+L++ +  +  +  + L      
Sbjct: 69  YNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWI--EKRR-GEKLDKVLAL 125

Query: 436 KILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTH 495
           ++   I + + Y+H    +++++RD+KPSNI L      K+GDFGL    ++      + 
Sbjct: 126 ELFEQITKGVDYIHS---KKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRTRS- 181

Query: 496 IVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRR 534
             GTL Y++PE   +       D+Y+ G+++ E+     
Sbjct: 182 -KGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCD 219

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score =  139 bits (351), Expect = 1e-36
 Identities = 55/205 (26%), Positives = 90/205 (43%), Gaps = 18/205 (8%)

Query: 335 QNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHG 394
           Q  VG G FG V+R      G + A+K++    +    E   E+++   L    +V L+G
Sbjct: 63  QPRVGRGSFGEVHRMKDKQTGFQCAVKKV--RLEVFRVE---ELVACAGLSSPRIVPLYG 117

Query: 395 WCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQ 454
             R+   + +  + +  GSL +L+     K    L  D+    L    + L YLH    +
Sbjct: 118 AVREGPWVNIFMELLEGGSLGQLI-----KQMGCLPEDRALYYLGQALEGLEYLHT---R 169

Query: 455 RVVHRDVKPSNILLDTY-LNAKLGDFGLAKIYEHGANPQTTH----IVGTLGYLAPELTR 509
           R++H DVK  N+LL +    A L DFG A   +     ++      I GT  ++APE+  
Sbjct: 170 RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVM 229

Query: 510 TGKATTSTDVYSYGILMLEVACGRR 534
                   D++S   +ML +  G  
Sbjct: 230 GKPCDAKVDIWSSCCMMLHMLNGCH 254

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score =  137 bits (348), Expect = 2e-36
 Identities = 63/228 (27%), Positives = 105/228 (46%), Gaps = 35/228 (15%)

Query: 332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQ 391
           F E  ++G G FG+V +          AIK+I H  ++ +   ++E+M +  L H+ +V+
Sbjct: 8   FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEK-LSTILSEVMLLASLNHQYVVR 66

Query: 392 LHG-------------WCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKIL 438
            +                +K+  L +  +Y  NG+L  L+  ++   ++   W    +IL
Sbjct: 67  YYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQIL 126

Query: 439 IGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEH----------- 487
             ++    Y+H    Q ++HRD+KP NI +D   N K+GDFGLAK               
Sbjct: 127 EALS----YIHS---QGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQN 179

Query: 488 --GANPQTTHIVGTLGYLAPE-LTRTGKATTSTDVYSYGILMLEVACG 532
             G++   T  +GT  Y+A E L  TG      D+YS GI+  E+   
Sbjct: 180 LPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYP 227

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score =  137 bits (348), Expect = 2e-36
 Identities = 58/200 (29%), Positives = 89/200 (44%), Gaps = 12/200 (6%)

Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS--QQGMKE-FVAEIMSMGRLRHRNLVQLH 393
            +G GGF + +           A K +  +   +   +E    EI     L H+++V  H
Sbjct: 22  FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 81

Query: 394 GWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECN 453
           G+    D + +V +     SL     +  HK RK LT  +    L  I     YLH    
Sbjct: 82  GFFEDNDFVFVVLELCRRRSL----LEL-HKRRKALTEPEARYYLRQIVLGCQYLH---R 133

Query: 454 QRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKA 513
            RV+HRD+K  N+ L+  L  K+GDFGLA   E+    +   + GT  Y+APE+      
Sbjct: 134 NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV-LCGTPNYIAPEVLSKKGH 192

Query: 514 TTSTDVYSYGILMLEVACGR 533
           +   DV+S G +M  +  G+
Sbjct: 193 SFEVDVWSIGCIMYTLLVGK 212

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score =  136 bits (346), Expect = 3e-36
 Identities = 58/202 (28%), Positives = 97/202 (48%), Gaps = 13/202 (6%)

Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVA----EIMSMGRLRHRNLVQL 392
            +G GG   VY      L ++VAIK       +  +E +     E+ +  +L H+N+V +
Sbjct: 18  KLGGGGMSTVYLAEDTILNIKVAIK-AIFIPPREKEETLKRFEREVHNSSQLSHQNIVSM 76

Query: 393 HGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEEC 452
                + D   LV +Y+   +L + +     +    L+ D        I   + + H+  
Sbjct: 77  IDVDEEDDCYYLVMEYIEGPTLSEYI-----ESHGPLSVDTAINFTNQILDGIKHAHD-- 129

Query: 453 NQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGK 512
             R+VHRD+KP NIL+D+    K+ DFG+AK     +  QT H++GT+ Y +PE  +   
Sbjct: 130 -MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEA 188

Query: 513 ATTSTDVYSYGILMLEVACGRR 534
               TD+YS GI++ E+  G  
Sbjct: 189 TDECTDIYSIGIVLYEMLVGEP 210

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score =  137 bits (348), Expect = 3e-36
 Identities = 58/200 (29%), Positives = 89/200 (44%), Gaps = 12/200 (6%)

Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS--QQGMKE-FVAEIMSMGRLRHRNLVQLH 393
            +G GGF + +           A K +  +   +   +E    EI     L H+++V  H
Sbjct: 48  FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 107

Query: 394 GWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECN 453
           G+    D + +V +     SL     +  HK RK LT  +    L  I     YLH    
Sbjct: 108 GFFEDNDFVFVVLELCRRRSL----LEL-HKRRKALTEPEARYYLRQIVLGCQYLH---R 159

Query: 454 QRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKA 513
            RV+HRD+K  N+ L+  L  K+GDFGLA   E+    +   + GT  Y+APE+      
Sbjct: 160 NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV-LCGTPNYIAPEVLSKKGH 218

Query: 514 TTSTDVYSYGILMLEVACGR 533
           +   DV+S G +M  +  G+
Sbjct: 219 SFEVDVWSIGCIMYTLLVGK 238

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score =  137 bits (346), Expect = 4e-36
 Identities = 59/205 (28%), Positives = 87/205 (42%), Gaps = 14/205 (6%)

Query: 332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRI--GHNSQQGMKEFVAEIMSMGRL-RHRN 388
           F   + +G G +G V++      G   A+KR        +     +AE+ S  ++ +H  
Sbjct: 59  FQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPC 118

Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYL 448
            V+L     +   L L  +     SL +            L   Q +  L     +L +L
Sbjct: 119 CVRLEQAWEEGGILYLQTELC-GPSLQQHC----EAWGASLPEAQVWGYLRDTLLALAHL 173

Query: 449 HEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELT 508
           H    Q +VH DVKP+NI L      KLGDFGL          +     G   Y+APEL 
Sbjct: 174 HS---QGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEV--QEGDPRYMAPELL 228

Query: 509 RTGKATTSTDVYSYGILMLEVACGR 533
           + G   T+ DV+S G+ +LEVAC  
Sbjct: 229 Q-GSYGTAADVFSLGLTILEVACNM 252

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score =  140 bits (354), Expect = 1e-35
 Identities = 48/194 (24%), Positives = 93/194 (47%), Gaps = 11/194 (5%)

Query: 339 GSGGFGRVYRGLMPSLGLEVAIKRI--GHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWC 396
           G G +G VY G+     L VA+K +       +   EF+ E   M  ++H NLVQL G C
Sbjct: 229 GGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFLKEAAVMKEIKHPNLVQLLGVC 285

Query: 397 RKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRV 456
            ++    ++ +++  G+L   L + +   R+ ++      +   I+ ++ YL +   +  
Sbjct: 286 TREPPFYIITEFMTYGNLLDYLRECN---RQEVSAVVLLYMATQISSAMEYLEK---KNF 339

Query: 457 VHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTS 516
           +HR++   N L+      K+ DFGL+++               + + APE     K +  
Sbjct: 340 IHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 399

Query: 517 TDVYSYGILMLEVA 530
           +DV+++G+L+ E+A
Sbjct: 400 SDVWAFGVLLWEIA 413

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score =  134 bits (339), Expect = 2e-35
 Identities = 58/204 (28%), Positives = 99/204 (48%), Gaps = 8/204 (3%)

Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRI--GHNSQQGMKEFVAEIMSMGRLRHRNLVQLHG 394
            +G+G +GR  +    S G  +  K +  G  ++   +  V+E+  +  L+H N+V+ + 
Sbjct: 13  TIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYD 72

Query: 395 W--CRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHE-- 450
               R    L +V +Y   G L  ++  K  K R+ L  +   +++  +  +L   H   
Sbjct: 73  RIIDRTNTTLYIVMEYCEGGDLASVI-TKGTKERQYLDEEFVLRVMTQLTLALKECHRRS 131

Query: 451 ECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRT 510
           +    V+HRD+KP+N+ LD   N KLGDFGLA+I  H  +   T  VGT  Y++PE    
Sbjct: 132 DGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKT-FVGTPYYMSPEQMNR 190

Query: 511 GKATTSTDVYSYGILMLEVACGRR 534
                 +D++S G L+ E+     
Sbjct: 191 MSYNEKSDIWSLGCLLYELCALMP 214

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score =  134 bits (339), Expect = 2e-35
 Identities = 58/197 (29%), Positives = 92/197 (46%), Gaps = 15/197 (7%)

Query: 339 GSGGFGRVYRGL--MPSLGLEVAIK--RIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHG 394
           GSG FG V +G   M  +   VA+K  +   N      E +AE   M +L +  +V++ G
Sbjct: 26  GSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIG 85

Query: 395 WCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQ 454
            C  +   +LV +    G L+K L     +  + +      +++  ++  + YL EE   
Sbjct: 86  ICEAE-SWMLVMEMAELGPLNKYL-----QQNRHVKDKNIIELVHQVSMGMKYL-EE--S 136

Query: 455 RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTL--GYLAPELTRTGK 512
             VHRD+   N+LL T   AK+ DFGL+K      N       G     + APE     K
Sbjct: 137 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 196

Query: 513 ATTSTDVYSYGILMLEV 529
            ++ +DV+S+G+LM E 
Sbjct: 197 FSSKSDVWSFGVLMWEA 213

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score =  135 bits (341), Expect = 2e-35
 Identities = 56/202 (27%), Positives = 81/202 (40%), Gaps = 13/202 (6%)

Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVA----EIMSMGRLRHRNLVQL 392
           LVG GG G VY          VA+K +   +      F      E  + GRL+  ++V +
Sbjct: 41  LVGRGGMGDVYEAEDTVRERIVALK-LMSETLSSDPVFRTRMQREARTAGRLQEPHVVPI 99

Query: 393 HGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEEC 452
           H +     +L +    +    L  +L  +       L   +   I+  I  +L   H   
Sbjct: 100 HDFGEIDGQLYVDMRLINGVDLAAMLRRQGP-----LAPPRAVAIVRQIGSALDAAHA-- 152

Query: 453 NQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGK 512
                HRDVKP NIL+     A L DFG+A         Q  + VGTL Y+APE      
Sbjct: 153 -AGATHRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYMAPERFSESH 211

Query: 513 ATTSTDVYSYGILMLEVACGRR 534
           AT   D+Y+   ++ E   G  
Sbjct: 212 ATYRADIYALTCVLYECLTGSP 233

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score =  133 bits (337), Expect = 3e-35
 Identities = 57/198 (28%), Positives = 93/198 (46%), Gaps = 11/198 (5%)

Query: 339 GSGGFGRVYRGLMPSLGLEVAIKRIGHNS--QQGMKEFVA-EIMSMGRLRHRNLVQLHGW 395
           G G F  VYR      GLEVAIK I   +  + GM + V  E+    +L+H ++++L+ +
Sbjct: 20  GKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNY 79

Query: 396 CRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQR 455
               + + LV +   NG +            K  + ++    +  I   +LYLH      
Sbjct: 80  FEDSNYVYLVLEMCHNGEM----NRYLKNRVKPFSENEARHFMHQIITGMLYLHS---HG 132

Query: 456 VVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATT 515
           ++HRD+  SN+LL   +N K+ DFGLA   +       T + GT  Y++PE+        
Sbjct: 133 ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT-LCGTPNYISPEIATRSAHGL 191

Query: 516 STDVYSYGILMLEVACGR 533
            +DV+S G +   +  GR
Sbjct: 192 ESDVWSLGCMFYTLLIGR 209

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score =  134 bits (339), Expect = 6e-35
 Identities = 60/201 (29%), Positives = 98/201 (48%), Gaps = 22/201 (10%)

Query: 339 GSGGFGRVYRGLMPSLG----LEVAIKRIGHN-SQQGMKEFVAEIMSMGRLRHRNLVQLH 393
           GSG FG VY+GL    G    + VAIK +    S +  KE + E   M  + + ++ +L 
Sbjct: 24  GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 83

Query: 394 GWCRKQDELLLVYDYVPNGSLDKLLFDKDHKL--RKLLTWDQRYKILIGIAQSLLYLHEE 451
           G C     + L+   +P G L   + +    +  + LL W       + IA+ + YL + 
Sbjct: 84  GIC-LTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLED- 135

Query: 452 CNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGT---LGYLAPELT 508
             +R+VHRD+   N+L+ T  + K+ DFGLAK+    A  +  H  G    + ++A E  
Sbjct: 136 --RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG--AEEKEYHAEGGKVPIKWMALESI 191

Query: 509 RTGKATTSTDVYSYGILMLEV 529
                T  +DV+SYG+ + E+
Sbjct: 192 LHRIYTHQSDVWSYGVTVWEL 212

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score =  132 bits (334), Expect = 1e-34
 Identities = 50/224 (22%), Positives = 89/224 (39%), Gaps = 29/224 (12%)

Query: 332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKE-FVAEIMSMGRLRHRNLV 390
           F     +G GGFG V+           AIKRI   +++  +E  + E+ ++ +L H  +V
Sbjct: 7   FEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIV 66

Query: 391 QLHG---------WCRKQDELLLVY---DYVPNGSLDKLLFDKDHKLRKLLTWDQRYKIL 438
           +              +     + +Y         +L   +        +         I 
Sbjct: 67  RYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWM--NGRCTIEERERSVCLHIF 124

Query: 439 IGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHI-- 496
           + IA+++ +LH    + ++HRD+KPSNI        K+GDFGL    +     QT     
Sbjct: 125 LQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPM 181

Query: 497 ---------VGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC 531
                    VGT  Y++PE       +   D++S G+++ E+  
Sbjct: 182 PAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY 225

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score =  132 bits (334), Expect = 1e-34
 Identities = 59/204 (28%), Positives = 99/204 (48%), Gaps = 25/204 (12%)

Query: 339 GSGGFGRVYRG----LMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHG 394
           G G FG V       L  + G  VA+K++ H++++ +++F  EI  +  L+H N+V+  G
Sbjct: 19  GKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKG 78

Query: 395 WCRKQDE--LLLVYDYVPNGSLDKLLFDKDHKL--RKLLTWDQRYKILIGIAQSLLYLHE 450
            C       L L+ +Y+P GSL   L     ++   KLL +         I + + YL  
Sbjct: 79  VCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQY------TSQICKGMEYLGT 132

Query: 451 ECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYL-----AP 505
              +R +HRD+   NIL++     K+GDFGL K+       +    V   G       AP
Sbjct: 133 ---KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQD---KEFFKVKEPGESPIFWYAP 186

Query: 506 ELTRTGKATTSTDVYSYGILMLEV 529
           E     K + ++DV+S+G+++ E+
Sbjct: 187 ESLTESKFSVASDVWSFGVVLYEL 210

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score =  131 bits (331), Expect = 3e-34
 Identities = 50/199 (25%), Positives = 93/199 (46%), Gaps = 21/199 (10%)

Query: 339 GSGGFGRVYRGLMPSLGLEVAIKRI--GHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWC 396
           G G +G VY G+     L VA+K +       +   EF+ E   M  ++H NLVQL G C
Sbjct: 22  GGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFLKEAAVMKEIKHPNLVQLLGVC 78

Query: 397 RKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRV 456
            ++    ++ +++  G+L   L  ++   R+ ++      +   I+ ++ YL +   +  
Sbjct: 79  TREPPFYIITEFMTYGNLLDYL--RECN-RQEVSAVVLLYMATQISSAMEYLEK---KNF 132

Query: 457 VHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYL-----APELTRTG 511
           +HRD+   N L+      K+ DFGL+++         T+             APE     
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGD-----TYTAHAGAKFPIKWTAPESLAYN 187

Query: 512 KATTSTDVYSYGILMLEVA 530
           K +  +DV+++G+L+ E+A
Sbjct: 188 KFSIKSDVWAFGVLLWEIA 206

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score =  130 bits (330), Expect = 3e-34
 Identities = 57/196 (29%), Positives = 93/196 (47%), Gaps = 13/196 (6%)

Query: 339 GSGGFGRVYRGLMPSLG--LEVAIKRIGHNSQQGMK-EFVAEIMSMGRLRHRNLVQLHGW 395
           G G FG V +G+       ++VAIK +   +++    E + E   M +L +  +V+L G 
Sbjct: 19  GCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGV 78

Query: 396 CRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQR 455
           C + + L+LV +    G L K L  K  ++          ++L  ++  + YL E   + 
Sbjct: 79  C-QAEALMLVMEMAGGGPLHKFLVGKREEI----PVSNVAELLHQVSMGMKYLEE---KN 130

Query: 456 VVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTL--GYLAPELTRTGKA 513
            VHRD+   N+LL     AK+ DFGL+K      +  T    G     + APE     K 
Sbjct: 131 FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKF 190

Query: 514 TTSTDVYSYGILMLEV 529
           ++ +DV+SYG+ M E 
Sbjct: 191 SSRSDVWSYGVTMWEA 206

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score =  132 bits (333), Expect = 4e-34
 Identities = 47/214 (21%), Positives = 91/214 (42%), Gaps = 27/214 (12%)

Query: 336 NLVGSGGFGRVYRGLMPSLGLEVAIKRI--GHNSQQGMKEFVAEIMSMGRLRHRNL--VQ 391
             +GSGG  +V++ L        AIK +       Q +  +  EI  + +L+  +   ++
Sbjct: 15  KQIGSGGSSKVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIR 73

Query: 392 LHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEE 451
           L+ +      + +V +   N  L+  L     K +K +   +R      + +++  +H+ 
Sbjct: 74  LYDYEITDQYIYMVMECG-NIDLNSWL-----KKKKSIDPWERKSYWKNMLEAVHTIHQ- 126

Query: 452 CNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IYEHGANPQTTHIVGTLGYLAPEL--- 507
               +VH D+KP+N L+      KL DFG+A  +     +      VGT+ Y+ PE    
Sbjct: 127 --HGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKD 183

Query: 508 --------TRTGKATTSTDVYSYGILMLEVACGR 533
                       K +  +DV+S G ++  +  G+
Sbjct: 184 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 217

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score =  131 bits (331), Expect = 4e-34
 Identities = 55/212 (25%), Positives = 84/212 (39%), Gaps = 19/212 (8%)

Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWC 396
            +G GGF  V        G   A+KRI  + QQ  +E   E        H N+++L  +C
Sbjct: 36  KLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYC 95

Query: 397 RKQD----ELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEEC 452
            ++     E  L+  +   G+L   + ++       LT DQ   +L+GI + L  +H   
Sbjct: 96  LRERGAKHEAWLLLPFFKRGTLWNEI-ERLKDKGNFLTEDQILWLLLGICRGLEAIHA-- 152

Query: 453 NQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHI--------VGTLGYLA 504
            +   HRD+KP+NILL       L D G               +          T+ Y A
Sbjct: 153 -KGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRA 211

Query: 505 PEL---TRTGKATTSTDVYSYGILMLEVACGR 533
           PEL            TDV+S G ++  +  G 
Sbjct: 212 PELFSVQSHCVIDERTDVWSLGCVLYAMMFGE 243

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score =  131 bits (331), Expect = 4e-34
 Identities = 51/208 (24%), Positives = 90/208 (43%), Gaps = 19/208 (9%)

Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVA----EIMSMGRLRHRNLVQL 392
           ++G GG   V+         +VA+K +          F      E  +   L H  +V +
Sbjct: 19  ILGFGGMSEVHLARDLRDHRDVAVK-VLRADLARDPSFYLRFRREAQNAAALNHPAIVAV 77

Query: 393 HGWCRKQDELL----LVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYL 448
           +     +        +V +YV   +L  ++  +       +T  +  +++    Q+L + 
Sbjct: 78  YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP-----MTPKRAIEVIADACQALNFS 132

Query: 449 HEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANP--QTTHIVGTLGYLAPE 506
           H+     ++HRDVKP+NI++      K+ DFG+A+      N   QT  ++GT  YL+PE
Sbjct: 133 HQ---NGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE 189

Query: 507 LTRTGKATTSTDVYSYGILMLEVACGRR 534
             R       +DVYS G ++ EV  G  
Sbjct: 190 QARGDSVDARSDVYSLGCVLYEVLTGEP 217

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score =  137 bits (345), Expect = 5e-34
 Identities = 72/218 (33%), Positives = 95/218 (43%), Gaps = 17/218 (7%)

Query: 339 GSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVA-EIMSMGRLRHRNLVQLH---- 393
           G+GGFG V R +    G +VAIK+         +E    EI  M +L H N+V       
Sbjct: 23  GTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPD 82

Query: 394 --GWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEE 451
                   D  LL  +Y   G L K L   ++     L       +L  I+ +L YLHE 
Sbjct: 83  GLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCG--LKEGPIRTLLSDISSALRYLHE- 139

Query: 452 CNQRVVHRDVKPSNILLDT---YLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELT 508
              R++HRD+KP NI+L      L  K+ D G AK  + G        VGTL YLAPEL 
Sbjct: 140 --NRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTE--FVGTLQYLAPELL 195

Query: 509 RTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELL 546
              K T + D +S+G L  E   G R   P     +  
Sbjct: 196 EQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWH 233

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score =  130 bits (330), Expect = 7e-34
 Identities = 47/214 (21%), Positives = 91/214 (42%), Gaps = 27/214 (12%)

Query: 336 NLVGSGGFGRVYRGLMPSLGLEVAIKRI--GHNSQQGMKEFVAEIMSMGRLRHRNL--VQ 391
             +GSGG  +V++ L        AIK +       Q +  +  EI  + +L+  +   ++
Sbjct: 34  KQIGSGGSSKVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIR 92

Query: 392 LHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEE 451
           L+ +      + +V +   N  L+  L     K +K +   +R      + +++  +H+ 
Sbjct: 93  LYDYEITDQYIYMVMECG-NIDLNSWL-----KKKKSIDPWERKSYWKNMLEAVHTIHQ- 145

Query: 452 CNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IYEHGANPQTTHIVGTLGYLAPEL--- 507
               +VH D+KP+N L+      KL DFG+A  +     +      VGT+ Y+ PE    
Sbjct: 146 --HGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKD 202

Query: 508 --------TRTGKATTSTDVYSYGILMLEVACGR 533
                       K +  +DV+S G ++  +  G+
Sbjct: 203 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 236

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score =  130 bits (330), Expect = 9e-34
 Identities = 56/204 (27%), Positives = 92/204 (45%), Gaps = 25/204 (12%)

Query: 339 GSGGFGRVYRGLMPSLG----LEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHG 394
           G G FG V       LG      VA+K++ H+     ++F  EI  +  L    +V+  G
Sbjct: 32  GKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRG 91

Query: 395 WCRKQDE--LLLVYDYVPNGSLDKLLFDKDHKL--RKLLTWDQRYKILIGIAQSLLYLHE 450
                    L LV +Y+P+G L   L     +L   +LL +         I + + YL  
Sbjct: 92  VSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLY------SSQICKGMEYLGS 145

Query: 451 ECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYL-----AP 505
              +R VHRD+   NIL+++  + K+ DFGLAK+     +    ++V   G       AP
Sbjct: 146 ---RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKD---YYVVREPGQSPIFWYAP 199

Query: 506 ELTRTGKATTSTDVYSYGILMLEV 529
           E       +  +DV+S+G+++ E+
Sbjct: 200 ESLSDNIFSRQSDVWSFGVVLYEL 223

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score =  130 bits (329), Expect = 1e-33
 Identities = 59/204 (28%), Positives = 100/204 (49%), Gaps = 25/204 (12%)

Query: 339 GSGGFGRVYRG----LMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHG 394
           G G FG V       L  + G  VA+K++ H++++ +++F  EI  +  L+H N+V+  G
Sbjct: 50  GKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKG 109

Query: 395 WCRKQDE--LLLVYDYVPNGSLDKLLFDKDHKL--RKLLTWDQRYKILIGIAQSLLYLHE 450
            C       L L+ +Y+P GSL   L     ++   KLL +         I + + YL  
Sbjct: 110 VCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQY------TSQICKGMEYLGT 163

Query: 451 ECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYL-----AP 505
              +R +HRD+   NIL++     K+GDFGL K+       +  + V   G       AP
Sbjct: 164 ---KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQD---KEYYKVKEPGESPIFWYAP 217

Query: 506 ELTRTGKATTSTDVYSYGILMLEV 529
           E     K + ++DV+S+G+++ E+
Sbjct: 218 ESLTESKFSVASDVWSFGVVLYEL 241

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score =  129 bits (326), Expect = 2e-33
 Identities = 52/201 (25%), Positives = 91/201 (45%), Gaps = 20/201 (9%)

Query: 339 GSGGFGRVYRGLMPSLG---LEVAIK--RIGH-NSQQGMKEFVAEIMSMGRLRHRNLVQL 392
           G G FG V RG   +     + VA+K  +    +  + M +F+ E+ +M  L HRNL++L
Sbjct: 27  GDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRL 86

Query: 393 HGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLR--KLLTWDQRYKILIGIAQSLLYLHE 450
           +G       + +V +  P GSL   L           L  +       + +A+ + YL  
Sbjct: 87  YGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRY------AVQVAEGMGYLES 139

Query: 451 ECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGY--LAPELT 508
              +R +HRD+   N+LL T    K+GDFGL +      +         + +   APE  
Sbjct: 140 ---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL 196

Query: 509 RTGKATTSTDVYSYGILMLEV 529
           +T   + ++D + +G+ + E+
Sbjct: 197 KTRTFSHASDTWMFGVTLWEM 217

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score =  131 bits (331), Expect = 2e-33
 Identities = 46/214 (21%), Positives = 90/214 (42%), Gaps = 27/214 (12%)

Query: 336 NLVGSGGFGRVYRGLMPSLGLEVAIKRI--GHNSQQGMKEFVAEIMSMGRLRHRNL--VQ 391
             +GSGG  +V++ L        AIK +       Q +  +  EI  + +L+  +   ++
Sbjct: 62  KQIGSGGSSKVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIR 120

Query: 392 LHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEE 451
           L+ +      + +V +   N  L+  L     K +K +   +R      + +++  +H+ 
Sbjct: 121 LYDYEITDQYIYMVMECG-NIDLNSWL-----KKKKSIDPWERKSYWKNMLEAVHTIHQ- 173

Query: 452 CNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IYEHGANPQTTHIVGTLGYLAPEL--- 507
               +VH D+KP+N L+      KL DFG+A  +     +      VG + Y+ PE    
Sbjct: 174 --HGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKD 230

Query: 508 --------TRTGKATTSTDVYSYGILMLEVACGR 533
                       K +  +DV+S G ++  +  G+
Sbjct: 231 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 264

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score =  129 bits (326), Expect = 2e-33
 Identities = 53/223 (23%), Positives = 99/223 (44%), Gaps = 27/223 (12%)

Query: 339 GSGGFGRVYRGLMPSLG----LEVAIKRI-GHNSQQGMKEFVAEIMSMGRLRHRNLVQLH 393
           G G FG+V        G     +VA+K +   +    + +   EI  +  L H N+V+  
Sbjct: 30  GEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYK 89

Query: 394 GWCRKQDE--LLLVYDYVPNGSLDKLLFDKDHKL--RKLLTWDQRYKILIGIAQSLLYLH 449
           G C +     + L+ +++P+GSL + L    +K+  ++ L +       + I + + YL 
Sbjct: 90  GICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKY------AVQICKGMDYLG 143

Query: 450 EECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYL-----A 504
               ++ VHRD+   N+L+++    K+GDFGL K  E     +  + V           A
Sbjct: 144 S---RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETD---KEYYTVKDDRDSPVFWYA 197

Query: 505 PELTRTGKATTSTDVYSYGILMLEVA-CGRRSIEPQKAAAELL 546
           PE     K   ++DV+S+G+ + E+         P     +++
Sbjct: 198 PECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMI 240

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score =  129 bits (327), Expect = 2e-33
 Identities = 60/197 (30%), Positives = 100/197 (50%), Gaps = 13/197 (6%)

Query: 339 GSGGFGRVYRGLMPSLG---LEVAIKRIGHNSQQGMK-EFVAEIMSMGRLRHRNLVQLHG 394
           GSG  G V  G +   G   + VAIK +     +  + +F++E   MG+  H N+++L G
Sbjct: 58  GSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEG 117

Query: 395 WCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQ 454
              +    ++V +Y+ NGSLD  L   D +     T  Q   +L G+   + YL +    
Sbjct: 118 VVTRGRLAMIVTEYMENGSLDTFLRTHDGQ----FTIMQLVGMLRGVGAGMRYLSD---L 170

Query: 455 RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYL--APELTRTGK 512
             VHRD+   N+L+D+ L  K+ DFGL+++ E   +   T   G +     APE      
Sbjct: 171 GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRT 230

Query: 513 ATTSTDVYSYGILMLEV 529
            ++++DV+S+G++M EV
Sbjct: 231 FSSASDVWSFGVVMWEV 247

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score =  127 bits (322), Expect = 4e-33
 Identities = 47/225 (20%), Positives = 91/225 (40%), Gaps = 32/225 (14%)

Query: 332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRI--GHNSQQGMKEFVAEIMSMGRL-RHRN 388
           F E   +GSG FG V++ +    G   AIKR           +  + E+ +   L +H +
Sbjct: 13  FHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSH 72

Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYL 448
           +V+      + D +L+  +Y   GSL   +  +++++       +   +L+ + + L Y+
Sbjct: 73  VVRYFSAWAEDDHMLIQNEYCNGGSLADAI-SENYRIMSYFKEAELKDLLLQVGRGLRYI 131

Query: 449 HEECNQRVVHRDVKPSNILLD-------------------TYLNAKLGDFGLAKIYEHGA 489
           H      +VH D+KPSNI +                      +  K+GD G        +
Sbjct: 132 HS---MSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVT---RIS 185

Query: 490 NPQTTHIVGTLGYLAPELTRTGKA-TTSTDVYSYGILMLEVACGR 533
           +PQ     G   +LA E+ +         D+++  + ++  A   
Sbjct: 186 SPQV--EEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAE 228

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score =  129 bits (327), Expect = 5e-33
 Identities = 66/198 (33%), Positives = 104/198 (52%), Gaps = 15/198 (7%)

Query: 339 GSGGFGRVYRGLMPSLG---LEVAIK--RIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLH 393
           G+G FG V  G +       + VAIK  ++G+  +Q  ++F+ E   MG+  H N+++L 
Sbjct: 54  GAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASIMGQFDHPNIIRLE 112

Query: 394 GWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECN 453
           G   K   +++V +Y+ NGSLD  L   D +     T  Q   +L GIA  + YL +   
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ----FTVIQLVGMLRGIASGMKYLSD--- 165

Query: 454 QRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYL--APELTRTG 511
              VHRD+   NIL+++ L  K+ DFGL ++ E       T   G +     +PE     
Sbjct: 166 MGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR 225

Query: 512 KATTSTDVYSYGILMLEV 529
           K T+++DV+SYGI++ EV
Sbjct: 226 KFTSASDVWSYGIVLWEV 243

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score =  128 bits (324), Expect = 6e-33
 Identities = 58/199 (29%), Positives = 96/199 (48%), Gaps = 18/199 (9%)

Query: 339 GSGGFGRVYRGLMPSLG----LEVAIKRI-GHNSQQGMKEFVAEIMSMGRLRHRNLVQLH 393
           GSG FG V++G+    G    + V IK I   + +Q  +     ++++G L H ++V+L 
Sbjct: 22  GSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLL 81

Query: 394 GWCRKQDELLLVYDYVPNGSLDKLLFDKDHKL--RKLLTWDQRYKILIGIAQSLLYLHEE 451
           G C     L LV  Y+P GSL   +      L  + LL W       + IA+ + YL E 
Sbjct: 82  GLC-PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNW------GVQIAKGMYYLEE- 133

Query: 452 CNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IYEHGANPQTTHIVGTLGYLAPELTRT 510
               +VHR++   N+LL +    ++ DFG+A  +         +     + ++A E    
Sbjct: 134 --HGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHF 191

Query: 511 GKATTSTDVYSYGILMLEV 529
           GK T  +DV+SYG+ + E+
Sbjct: 192 GKYTHQSDVWSYGVTVWEL 210

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score =  128 bits (323), Expect = 6e-33
 Identities = 59/201 (29%), Positives = 98/201 (48%), Gaps = 22/201 (10%)

Query: 339 GSGGFGRVYRGLMPSLG----LEVAIKRIGHNS-QQGMKEFVAEIMSMGRLRHRNLVQLH 393
           GSG FG VY+GL    G    + VAIK +   +  +  KE + E   M  + + ++ +L 
Sbjct: 24  GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 83

Query: 394 GWCRKQDELLLVYDYVPNGSLDKLLFDKDHKL--RKLLTWDQRYKILIGIAQSLLYLHEE 451
           G C     + L+   +P G L   + +    +  + LL W       + IA+ + YL + 
Sbjct: 84  GIC-LTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLED- 135

Query: 452 CNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGT---LGYLAPELT 508
             +R+VHRD+   N+L+ T  + K+ DFGLAK+    A  +  H  G    + ++A E  
Sbjct: 136 --RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG--AEEKEYHAEGGKVPIKWMALESI 191

Query: 509 RTGKATTSTDVYSYGILMLEV 529
                T  +DV+SYG+ + E+
Sbjct: 192 LHRIYTHQSDVWSYGVTVWEL 212

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score =  126 bits (320), Expect = 7e-33
 Identities = 56/201 (27%), Positives = 95/201 (47%), Gaps = 14/201 (6%)

Query: 336 NLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFV-AEIMSMGRLRHRNLVQL 392
             +G G FG VY          +A+K +      + G++  +  E+     LRH N+++L
Sbjct: 15  RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 74

Query: 393 HGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEEC 452
           +G+      + L+ +Y P G++    + +  KL K          +  +A +L Y H   
Sbjct: 75  YGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTA-TYITELANALSYCHS-- 127

Query: 453 NQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGK 512
            +RV+HRD+KP N+LL +    K+ DFG +    H  + + T + GTL YL PE+     
Sbjct: 128 -KRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTDLCGTLDYLPPEMIEGRM 183

Query: 513 ATTSTDVYSYGILMLEVACGR 533
                D++S G+L  E   G+
Sbjct: 184 HDEKVDLWSLGVLCYEFLVGK 204

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score =  128 bits (323), Expect = 7e-33
 Identities = 65/223 (29%), Positives = 94/223 (42%), Gaps = 25/223 (11%)

Query: 339 GSGGFGRVYRGLM----PSLGLEVAIKRI-GHNSQQGMKEFVAEIMSMGRLRHRNLVQLH 393
           G G FG+V            G  VA+K +      Q    +  EI  +  L H ++++  
Sbjct: 40  GEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYK 99

Query: 394 GWCRKQDE--LLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEE 451
           G C       L LV +YVP GSL   L      L +LL +         I + + YLH  
Sbjct: 100 GCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQLLLF------AQQICEGMAYLHA- 152

Query: 452 CNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYL-----APE 506
             Q  +HRD+   N+LLD     K+GDFGLAK    G      + V   G       APE
Sbjct: 153 --QHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEG---HEYYRVREDGDSPVFWYAPE 207

Query: 507 LTRTGKATTSTDVYSYGILMLEVA-CGRRSIEPQKAAAELLLV 548
             +  K   ++DV+S+G+ + E+      S  P     EL+ +
Sbjct: 208 CLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGI 250

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score =  127 bits (322), Expect = 8e-33
 Identities = 50/214 (23%), Positives = 84/214 (39%), Gaps = 26/214 (12%)

Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVA-EIMSMGRLRHRNLVQLHG- 394
           ++G G    V+RG     G   AIK   + S     +    E   + +L H+N+V+L   
Sbjct: 16  ILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAI 75

Query: 395 -WCRKQDELLLVYDYVPNGSLDKLLFD--KDHKLRKLLTWDQRYKILIGIAQSLLYLHEE 451
                    +L+ ++ P GSL    +   ++      L   +   +L  +   + +L E 
Sbjct: 76  EEETTTRHKVLIMEFCPCGSL----YTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRE- 130

Query: 452 CNQRVVHRDVKPSNILL----DTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
               +VHR++KP NI+     D     KL DFG A+  E      +  + GT  YL P++
Sbjct: 131 --NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVS--LYGTEEYLHPDM 186

Query: 508 TRTGKATTST--------DVYSYGILMLEVACGR 533
                             D++S G+     A G 
Sbjct: 187 YERAVLRKDHQKKYGATVDLWSIGVTFYHAATGS 220

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score =  132 bits (333), Expect = 1e-32
 Identities = 57/196 (29%), Positives = 93/196 (47%), Gaps = 13/196 (6%)

Query: 339 GSGGFGRVYRGL--MPSLGLEVAIKRIGHNSQQGMK-EFVAEIMSMGRLRHRNLVQLHGW 395
           G G FG V +G+  M    ++VAIK +   +++    E + E   M +L +  +V+L G 
Sbjct: 345 GCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGV 404

Query: 396 CRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQR 455
           C + + L+LV +    G L K L  K  ++          ++L  ++  + YL E   + 
Sbjct: 405 C-QAEALMLVMEMAGGGPLHKFLVGKREEI----PVSNVAELLHQVSMGMKYLEE---KN 456

Query: 456 VVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGY--LAPELTRTGKA 513
            VHR++   N+LL     AK+ DFGL+K      +  T    G       APE     K 
Sbjct: 457 FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKF 516

Query: 514 TTSTDVYSYGILMLEV 529
           ++ +DV+SYG+ M E 
Sbjct: 517 SSRSDVWSYGVTMWEA 532

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score =  129 bits (326), Expect = 2e-32
 Identities = 61/198 (30%), Positives = 94/198 (47%), Gaps = 13/198 (6%)

Query: 335 QNLVGSGGFGRVYRGLMPSLGLEVAIK--RIGHNSQQGMKEFVAEIMSMGRLRHRNLVQL 392
           +  +G G FG V+ G        VAIK  + G  S +    F+ E   M +LRH  LVQL
Sbjct: 189 EVKLGQGCFGEVWMGTWNGTT-RVAIKTLKPGTMSPE---AFLQEAQVMKKLRHEKLVQL 244

Query: 393 HGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEEC 452
           +    ++  + +V +Y+  GSL   L  +     K L   Q   +   IA  + Y+    
Sbjct: 245 YAVVSEE-PIYIVTEYMSKGSLLDFLKGET---GKYLRLPQLVDMAAQIASGMAYVER-- 298

Query: 453 NQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGK 512
               VHRD++ +NIL+   L  K+ DFGLA++ E             + + APE    G+
Sbjct: 299 -MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR 357

Query: 513 ATTSTDVYSYGILMLEVA 530
            T  +DV+S+GIL+ E+ 
Sbjct: 358 FTIKSDVWSFGILLTELT 375

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score =  127 bits (321), Expect = 2e-32
 Identities = 30/230 (13%), Positives = 59/230 (25%), Gaps = 41/230 (17%)

Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRI---GHNSQQGMKEFVAEIMSMGRLRHRNLVQLH 393
            +  G    V+         + A+K       NS+  ++       +  RL   +  +  
Sbjct: 69  PLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEAR 128

Query: 394 GWCR--------------------------KQDELLLVYDYVPNGSLDKL--LFDKDHKL 425
              R                               LL+     +  L+ L    D  +  
Sbjct: 129 DRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPA-ASVDLELLFSTLDFVYVF 187

Query: 426 RKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIY 485
           R        + +   + +    L     + +VH    P N+ +       LGD       
Sbjct: 188 RGDEGILALHILTAQLIRLAANLQS---KGLVHGHFTPDNLFIMPDGRLMLGDVSAL--- 241

Query: 486 EHGANPQTTHIVGTLGYLAPELTRTGKA--TTSTDVYSYGILMLEVACGR 533
                 +       + Y   E      A  T + + +  G+ +  V C  
Sbjct: 242 -WKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLF 290

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score =  125 bits (315), Expect = 3e-32
 Identities = 55/195 (28%), Positives = 94/195 (48%), Gaps = 17/195 (8%)

Query: 339 GSGGFGRVYRGLMPSLGLEVAIK--RIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWC 396
           GSG FG V+ G   +   +VAIK  R G  S++   +F+ E   M +L H  LVQL+G C
Sbjct: 17  GSGQFGLVHLGYWLNKD-KVAIKTIREGAMSEE---DFIEEAEVMMKLSHPKLVQLYGVC 72

Query: 397 RKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRV 456
            +Q  + LV +++ +G L   L  +          +    + + + + + YL E     V
Sbjct: 73  LEQAPICLVTEFMEHGCLSDYLRTQRGL----FAAETLLGMCLDVCEGMAYLEE---ACV 125

Query: 457 VHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGY--LAPELTRTGKAT 514
           +HRD+   N L+      K+ DFG+ +      +  T+           +PE+    + +
Sbjct: 126 IHRDLAARNCLVGENQVIKVSDFGMTRFVLD--DQYTSSTGTKFPVKWASPEVFSFSRYS 183

Query: 515 TSTDVYSYGILMLEV 529
           + +DV+S+G+LM EV
Sbjct: 184 SKSDVWSFGVLMWEV 198

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score =  125 bits (317), Expect = 3e-32
 Identities = 53/204 (25%), Positives = 92/204 (45%), Gaps = 15/204 (7%)

Query: 335 QNLVGSGGFGRVYRGLMPSLG---LEVAIKRI-GHNSQQGMKEFVAEIMSMGRLRHRNLV 390
             ++G G FG VY G +       +  A+K +        + +F+ E + M    H N++
Sbjct: 30  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 89

Query: 391 QLHGWCRKQDE-LLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLH 449
            L G C + +   L+V  Y+ +G L   +           T        + +A+ + YL 
Sbjct: 90  SLLGICLRSEGSPLVVLPYMKHGDLRNFI----RNETHNPTVKDLIGFGLQVAKGMKYLA 145

Query: 450 EECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IYEHGANPQTTHIVGTL--GYLAPE 506
               ++ VHRD+   N +LD     K+ DFGLA+ +Y+             L   ++A E
Sbjct: 146 S---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 202

Query: 507 LTRTGKATTSTDVYSYGILMLEVA 530
             +T K TT +DV+S+G+L+ E+ 
Sbjct: 203 SLQTQKFTTKSDVWSFGVLLWELM 226

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score =  125 bits (315), Expect = 3e-32
 Identities = 66/199 (33%), Positives = 98/199 (49%), Gaps = 21/199 (10%)

Query: 335 QNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHG 394
              +G G FG V  G     G +VA+K I +++    + F+AE   M +LRH NLVQL G
Sbjct: 26  LQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLG 81

Query: 395 WC-RKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECN 453
               ++  L +V +Y+  GSL   L  +    R +L  D   K  + + +++ YL     
Sbjct: 82  VIVEEKGGLYIVTEYMAKGSLVDYLRSRG---RSVLGGDCLLKFSLDVCEAMEYLEG--- 135

Query: 454 QRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IYEHGANPQTTHIVGTLGY--LAPELTRT 510
              VHRD+   N+L+     AK+ DFGL K          +T   G L     APE  R 
Sbjct: 136 NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS-------STQDTGKLPVKWTAPEALRE 188

Query: 511 GKATTSTDVYSYGILMLEV 529
            K +T +DV+S+GIL+ E+
Sbjct: 189 KKFSTKSDVWSFGILLWEI 207

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score =  129 bits (327), Expect = 5e-32
 Identities = 62/194 (31%), Positives = 92/194 (47%), Gaps = 13/194 (6%)

Query: 339 GSGGFGRVYRGLMPSLGLEVAIK--RIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWC 396
           G G FG V+ G        VAIK  + G  S +    F+ E   M +LRH  LVQL+   
Sbjct: 276 GQGCFGEVWMGTWNGTT-RVAIKTLKPGTMSPE---AFLQEAQVMKKLRHEKLVQLYAVV 331

Query: 397 RKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRV 456
            ++  + +V +Y+  GSL   L  K     K L   Q   +   IA  + Y+        
Sbjct: 332 SEEP-IYIVTEYMSKGSLLDFL--KGET-GKYLRLPQLVDMAAQIASGMAYVER---MNY 384

Query: 457 VHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTS 516
           VHRD++ +NIL+   L  K+ DFGLA++ E             + + APE    G+ T  
Sbjct: 385 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 444

Query: 517 TDVYSYGILMLEVA 530
           +DV+S+GIL+ E+ 
Sbjct: 445 SDVWSFGILLTELT 458

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score =  125 bits (317), Expect = 5e-32
 Identities = 65/198 (32%), Positives = 107/198 (54%), Gaps = 14/198 (7%)

Query: 339 GSGGFGRVYRGLM----PSLGLEVAIKRIGHN-SQQGMKEFVAEIMSMGRLRHRNLVQLH 393
           G+G FG VY+G++        + VAIK +    +++   +F+ E   MG+  H N+++L 
Sbjct: 53  GAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLE 112

Query: 394 GWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECN 453
           G   K   ++++ +Y+ NG+LDK L +KD +     +  Q   +L GIA  + YL     
Sbjct: 113 GVISKYKPMMIITEYMENGALDKFLREKDGE----FSVLQLVGMLRGIAAGMKYLAN--- 165

Query: 454 QRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGY--LAPELTRTG 511
              VHRD+   NIL+++ L  K+ DFGL+++ E       T   G +     APE     
Sbjct: 166 MNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYR 225

Query: 512 KATTSTDVYSYGILMLEV 529
           K T+++DV+S+GI+M EV
Sbjct: 226 KFTSASDVWSFGIVMWEV 243

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score =  127 bits (320), Expect = 5e-32
 Identities = 50/214 (23%), Positives = 83/214 (38%), Gaps = 26/214 (12%)

Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVA-EIMSMGRLRHRNLVQLHGW 395
           ++G G    V+RG     G   AIK   + S     +    E   + +L H+N+V+L   
Sbjct: 16  ILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAI 75

Query: 396 --CRKQDELLLVYDYVPNGSLDKLLFDK--DHKLRKLLTWDQRYKILIGIAQSLLYLHEE 451
                    +L+ ++ P GSL    +    +      L   +   +L  +   + +L E 
Sbjct: 76  EEETTTRHKVLIMEFCPCGSL----YTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRE- 130

Query: 452 CNQRVVHRDVKPSNILL----DTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
               +VHR++KP NI+     D     KL DFG A+  E      +  + GT  YL P++
Sbjct: 131 --NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVS--LYGTEEYLHPDM 186

Query: 508 TRTGKATTST--------DVYSYGILMLEVACGR 533
                             D++S G+     A G 
Sbjct: 187 YERAVLRKDHQKKYGATVDLWSIGVTFYHAATGS 220

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score =  124 bits (314), Expect = 6e-32
 Identities = 47/213 (22%), Positives = 87/213 (40%), Gaps = 40/213 (18%)

Query: 339 GSGGFGRVYRGLMPSLG-------LEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQ 391
           G G F ++++G+   +G        EV +K +    +   + F      M +L H++LV 
Sbjct: 17  GQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVL 76

Query: 392 LHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEE 451
            +G C   DE +LV ++V  GSLD  L    +     +    + ++   +A ++ +L E 
Sbjct: 77  NYGVCVCGDENILVQEFVKFGSLDTYLKKNKNC----INILWKLEVAKQLAAAMHFLEE- 131

Query: 452 CNQRVVHRDVKPSNILLDTYLN--------AKLGDFGLAKIYEHGANPQTTHIVGTLGY- 502
               ++H +V   NILL    +         KL D G++             ++      
Sbjct: 132 --NTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISIT-----------VLPKDILQ 178

Query: 503 -----LAPELTRTGKA-TTSTDVYSYGILMLEV 529
                + PE     K    +TD +S+G  + E+
Sbjct: 179 ERIPWVPPECIENPKNLNLATDKWSFGTTLWEI 211

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score =  126 bits (317), Expect = 1e-31
 Identities = 52/204 (25%), Positives = 93/204 (45%), Gaps = 15/204 (7%)

Query: 335 QNLVGSGGFGRVYRGLMPSLG---LEVAIKRI-GHNSQQGMKEFVAEIMSMGRLRHRNLV 390
             ++G G FG VY G +       +  A+K +        + +F+ E + M    H N++
Sbjct: 94  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 153

Query: 391 QLHGWCRKQDE-LLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLH 449
            L G C + +   L+V  Y+ +G L   +           T        + +A+ + +L 
Sbjct: 154 SLLGICLRSEGSPLVVLPYMKHGDLRNFI----RNETHNPTVKDLIGFGLQVAKGMKFLA 209

Query: 450 EECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IYEHGANPQTTHIVGTL--GYLAPE 506
               ++ VHRD+   N +LD     K+ DFGLA+ +Y+   +         L   ++A E
Sbjct: 210 S---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 266

Query: 507 LTRTGKATTSTDVYSYGILMLEVA 530
             +T K TT +DV+S+G+L+ E+ 
Sbjct: 267 SLQTQKFTTKSDVWSFGVLLWELM 290

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score =  123 bits (312), Expect = 1e-31
 Identities = 50/200 (25%), Positives = 90/200 (45%), Gaps = 14/200 (7%)

Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRI--GHNSQQGMKEFVA-EIMSMGRLRHRNLVQLH 393
            +G G FG VY          +A+K +      ++G++  +  EI     LRH N+++++
Sbjct: 21  PLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMY 80

Query: 394 GWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECN 453
            +   +  + L+ ++ P G L    + +  K  +         +   +A +L Y HE   
Sbjct: 81  NYFHDRKRIYLMLEFAPRGEL----YKELQKHGRFDEQRSATFME-ELADALHYCHE--- 132

Query: 454 QRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKA 513
           ++V+HRD+KP N+L+      K+ DFG +         + T + GTL YL PE+      
Sbjct: 133 RKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS--LRRRT-MCGTLDYLPPEMIEGKTH 189

Query: 514 TTSTDVYSYGILMLEVACGR 533
               D++  G+L  E   G 
Sbjct: 190 DEKVDLWCAGVLCYEFLVGM 209

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score =  123 bits (311), Expect = 1e-31
 Identities = 57/201 (28%), Positives = 93/201 (46%), Gaps = 18/201 (8%)

Query: 339 GSGGFGRVYRGLMPSLGLEVAIKRI--GHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWC 396
           GSG FG V  G       +VA+K I  G  S+    EF  E  +M +L H  LV+ +G C
Sbjct: 17  GSGQFGVVKLGKWKG-QYDVAVKMIKEGSMSED---EFFQEAQTMMKLSHPKLVKFYGVC 72

Query: 397 RKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRV 456
            K+  + +V +Y+ NG L   L          L   Q  ++   + + + +L      + 
Sbjct: 73  SKEYPIYIVTEYISNGCLLNYLRSHGKG----LEPSQLLEMCYDVCEGMAFLES---HQF 125

Query: 457 VHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGY--LAPELTRTGKAT 514
           +HRD+   N L+D  L  K+ DFG+ +      +   + +         APE+    K +
Sbjct: 126 IHRDLAARNCLVDRDLCVKVSDFGMTRYVLD--DQYVSSVGTKFPVKWSAPEVFHYFKYS 183

Query: 515 TSTDVYSYGILMLEVA-CGRR 534
           + +DV+++GILM EV   G+ 
Sbjct: 184 SKSDVWAFGILMWEVFSLGKM 204

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score =  126 bits (319), Expect = 2e-31
 Identities = 66/196 (33%), Positives = 97/196 (49%), Gaps = 21/196 (10%)

Query: 339 GSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWC-R 397
           G G FG V  G     G +VA+K I +++    + F+AE   M +LRH NLVQL G    
Sbjct: 202 GKGEFGDVMLGDY--RGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVE 257

Query: 398 KQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVV 457
           ++  L +V +Y+  GSL   L  +    R +L  D   K  + + +++ YL        V
Sbjct: 258 EKGGLYIVTEYMAKGSLVDYLRSRG---RSVLGGDCLLKFSLDVCEAMEYLEG---NNFV 311

Query: 458 HRDVKPSNILLDTYLNAKLGDFGLAK-IYEHGANPQTTHIVGTLGY--LAPELTRTGKAT 514
           HRD+   N+L+     AK+ DFGL K          +T   G L     APE  R  K +
Sbjct: 312 HRDLAARNVLVSEDNVAKVSDFGLTKEAS-------STQDTGKLPVKWTAPEALREKKFS 364

Query: 515 TSTDVYSYGILMLEVA 530
           T +DV+S+GIL+ E+ 
Sbjct: 365 TKSDVWSFGILLWEIY 380

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score =  122 bits (309), Expect = 2e-31
 Identities = 52/203 (25%), Positives = 96/203 (47%), Gaps = 26/203 (12%)

Query: 339 GSGGFGRVYRGLMPSLG---LEVAIK--RIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLH 393
           G G FG V++G+  S     L VAIK  +   +     ++F+ E ++M +  H ++V+L 
Sbjct: 24  GEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSV-REKFLQEALTMRQFDHPHIVKLI 82

Query: 394 GWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECN 453
           G   +   + ++ +    G L   L  + + L               ++ +L YL     
Sbjct: 83  GVITENP-VWIIMELCTLGELRSFLQVRKYSL----DLASLILYAYQLSTALAYLES--- 134

Query: 454 QRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IYEHGANPQTTHIVGTLGYL-----APEL 507
           +R VHRD+   N+L+ +    KLGDFGL++ + +      +T+   + G L     APE 
Sbjct: 135 KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED------STYYKASKGKLPIKWMAPES 188

Query: 508 TRTGKATTSTDVYSYGILMLEVA 530
               + T+++DV+ +G+ M E+ 
Sbjct: 189 INFRRFTSASDVWMFGVCMWEIL 211

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score =  122 bits (309), Expect = 2e-31
 Identities = 55/202 (27%), Positives = 99/202 (49%), Gaps = 20/202 (9%)

Query: 339 GSGGFGRVYRGLMPSLGLEVAIK--RIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWC 396
           G+G FG V  G       +VAIK  + G  S+    EF+ E   M  L H  LVQL+G C
Sbjct: 33  GTGQFGVVKYGKWRG-QYDVAIKMIKEGSMSED---EFIEEAKVMMNLSHEKLVQLYGVC 88

Query: 397 RKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRV 456
            KQ  + ++ +Y+ NG L   L +  H+        Q  ++   + +++ YL     ++ 
Sbjct: 89  TKQRPIFIITEYMANGCLLNYLREMRHR----FQTQQLLEMCKDVCEAMEYLES---KQF 141

Query: 457 VHRDVKPSNILLDTYLNAKLGDFGLAK-IYEHGANPQTTHIVGTLGY--LAPELTRTGKA 513
           +HRD+   N L++     K+ DFGL++ + +   +  T+ +          PE+    K 
Sbjct: 142 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLD---DEYTSSVGSKFPVRWSPPEVLMYSKF 198

Query: 514 TTSTDVYSYGILMLEVA-CGRR 534
           ++ +D++++G+LM E+   G+ 
Sbjct: 199 SSKSDIWAFGVLMWEIYSLGKM 220

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score =  122 bits (309), Expect = 2e-31
 Identities = 50/199 (25%), Positives = 90/199 (45%), Gaps = 20/199 (10%)

Query: 339 GSGGFGRVYRGLMPSLG---LEVAIKRIGHN-SQQGMKEFVAEIMSMGRLRHRNLVQLHG 394
           G G FG VY G+  +     + VA+K    + +    ++F++E + M  L H ++V+L G
Sbjct: 21  GEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIG 80

Query: 395 WCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQ 454
              ++    ++ +  P G L   L    + L             + I +++ YL      
Sbjct: 81  IIEEE-PTWIIMELYPYGELGHYLERNKNSL----KVLTLVLYSLQICKAMAYLES---I 132

Query: 455 RVVHRDVKPSNILLDTYLNAKLGDFGLAK-IYEHGANPQTTHIVGTL---GYLAPELTRT 510
             VHRD+   NIL+ +    KLGDFGL++ I +            T     +++PE    
Sbjct: 133 NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDE----DYYKASVTRLPIKWMSPESINF 188

Query: 511 GKATTSTDVYSYGILMLEV 529
            + TT++DV+ + + M E+
Sbjct: 189 RRFTTASDVWMFAVCMWEI 207

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score =  124 bits (312), Expect = 2e-31
 Identities = 50/220 (22%), Positives = 86/220 (39%), Gaps = 27/220 (12%)

Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLR-HRNLVQLHGW 395
           ++  GGF  VY       G E A+KR+  N ++  +  + E+  M +L  H N+VQ    
Sbjct: 35  VLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSA 94

Query: 396 C--------RKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLY 447
                      Q E LL+ +      ++ L   K  + R  L+ D   KI     +++ +
Sbjct: 95  ASIGKEESDTGQAEFLLLTELCKGQLVEFL---KKMESRGPLSCDTVLKIFYQTCRAVQH 151

Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHI----------- 496
           +H      ++HRD+K  N+LL      KL DFG A    H  +   +             
Sbjct: 152 MHR-QKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITR 210

Query: 497 VGTLGYLAPEL---TRTGKATTSTDVYSYGILMLEVACGR 533
             T  Y  PE+             D+++ G ++  +   +
Sbjct: 211 NTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQ 250

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score =  122 bits (308), Expect = 3e-31
 Identities = 61/196 (31%), Positives = 100/196 (51%), Gaps = 17/196 (8%)

Query: 339 GSGGFGRVYRGLMPSLGLEVAIK--RIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWC 396
           G+G FG V+ G       +VA+K  + G  S      F+AE   M +L+H+ LV+L+   
Sbjct: 22  GAGQFGEVWMGYYNGHT-KVAVKSLKQGSMSPD---AFLAEANLMKQLQHQRLVRLYAVV 77

Query: 397 RKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRV 456
             Q+ + ++ +Y+ NGSL   L  K       LT ++   +   IA+ + ++ E   +  
Sbjct: 78  -TQEPIYIITEYMENGSLVDFL--KTPS-GIKLTINKLLDMAAQIAEGMAFIEE---RNY 130

Query: 457 VHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGY--LAPELTRTGKAT 514
           +HRD++ +NIL+   L+ K+ DFGLA++ E   N  T            APE    G  T
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIED--NEYTAREGAKFPIKWTAPEAINYGTFT 188

Query: 515 TSTDVYSYGILMLEVA 530
             +DV+S+GIL+ E+ 
Sbjct: 189 IKSDVWSFGILLTEIV 204

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score =  128 bits (324), Expect = 3e-31
 Identities = 50/205 (24%), Positives = 85/205 (41%), Gaps = 24/205 (11%)

Query: 337 LVGSGGFGRVYRGLMPSL-GLEVAIKRIGHNSQQGMKE-FVAEIMSMGRLRHRNLVQLH- 393
            +  GG G +Y  L  ++ G  V +K + H+     +   +AE   +  + H ++VQ+  
Sbjct: 87  CIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFN 146

Query: 394 -GWCRKQDELLLVY---DYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLH 449
                 +    + Y   +YV   SL +          + L   +    L+ I  +L YLH
Sbjct: 147 FVEHTDRHGDPVGYIVMEYVGGQSLKRSK-------GQKLPVAEAIAYLLEILPALSYLH 199

Query: 450 EECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTR 509
                 +V+ D+KP NI+L T    KL D G              ++ GT G+ APE+ R
Sbjct: 200 S---IGLVYNDLKPENIML-TEEQLKLIDLGAVS-----RINSFGYLYGTPGFQAPEIVR 250

Query: 510 TGKATTSTDVYSYGILMLEVACGRR 534
               T +TD+Y+ G  +  +     
Sbjct: 251 -TGPTVATDIYTVGRTLAALTLDLP 274

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score =  125 bits (314), Expect = 5e-31
 Identities = 42/319 (13%), Positives = 81/319 (25%), Gaps = 64/319 (20%)

Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRI---GHNSQQGMKEFVAEIMSMGRLRH------- 386
           ++G               G    +             +K+   E++ +  LR        
Sbjct: 85  VLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQA 144

Query: 387 ---------RNLVQLHGWCRKQDE-------------LLLVYDYVPNGSLDKLLFDKDHK 424
                     +LV+     +                  L         +  ++L      
Sbjct: 145 KVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHS-S 203

Query: 425 LRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKI 484
             K L    R ++ + + + L  LH      +VH  ++P +I+LD      L  F     
Sbjct: 204 THKSLVHHARLQLTLQVIRLLASLHH---YGLVHTYLRPVDIVLDQRGGVFLTGFEHLVR 260

Query: 485 YEHGANPQTTHIVGTLGYLAPELTR-----TGKATTSTDVYSYGILMLEVACGRRSIEPQ 539
               A              A  +           T + D ++ G+ +  + C      P 
Sbjct: 261 DGASAVSPIGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADL---PN 317

Query: 540 KAAAELLLVDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRR 599
              A L   +W+        I Q +             L+    L         R    +
Sbjct: 318 TDDAALGGSEWI--FRSCKNIPQPV-----------RALLEGF-L---RYPKEDRLLPLQ 360

Query: 600 VVE---FLLGDSSLPPLPP 615
            +E   +    + L    P
Sbjct: 361 AMETPEYEQLRTELSAALP 379

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score =  121 bits (307), Expect = 6e-31
 Identities = 59/216 (27%), Positives = 92/216 (42%), Gaps = 33/216 (15%)

Query: 339 GSGGFGRVYRGLMPSLG-----LEVAIK--RIGHNSQQGMKEFVAEIMSMGRLRHRNLVQ 391
           G   FG+VY+G +           VAIK  +         +EF  E M   RL+H N+V 
Sbjct: 18  GEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPL-REEFRHEAMLRARLQHPNVVC 76

Query: 392 LHGWCRKQDELLLVYDYVPNGSLDKLL-----------FDKDHKLRKLLTWDQRYKILIG 440
           L G   K   L +++ Y  +G L + L            D D  ++  L       ++  
Sbjct: 77  LLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQ 136

Query: 441 IAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLA-KIYEHGANPQTTHIVGT 499
           IA  + YL       VVH+D+   N+L+   LN K+ D GL  ++Y         + +  
Sbjct: 137 IAAGMEYLSS---HHVVHKDLATRNVLVYDKLNVKISDLGLFREVYA-----ADYYKLLG 188

Query: 500 LGYL-----APELTRTGKATTSTDVYSYGILMLEVA 530
              L     APE    GK +  +D++SYG+++ EV 
Sbjct: 189 NSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVF 224

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score =  122 bits (308), Expect = 6e-31
 Identities = 66/213 (30%), Positives = 107/213 (50%), Gaps = 13/213 (6%)

Query: 332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQ 391
           F     +G G +G VY+ +    G  VAIK++    +  ++E + EI  M +    ++V+
Sbjct: 31  FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQV--PVESDLQEIIKEISIMQQCDSPHVVK 88

Query: 392 LHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEE 451
            +G   K  +L +V +Y   GS+  ++        K LT D+   IL    + L YLH  
Sbjct: 89  YYGSYFKNTDLWIVMEYCGAGSVSDII----RLRNKTLTEDEIATILQSTLKGLEYLH-- 142

Query: 452 CNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTG 511
              R +HRD+K  NILL+T  +AKL DFG+A         + T ++GT  ++APE+ +  
Sbjct: 143 -FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNT-VIGTPFWMAPEVIQEI 200

Query: 512 KATTSTDVYSYGILMLEVACGR---RSIEPQKA 541
                 D++S GI  +E+A G+     I P +A
Sbjct: 201 GYNCVADIWSLGITAIEMAEGKPPYADIHPMRA 233

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score =  122 bits (308), Expect = 7e-31
 Identities = 56/213 (26%), Positives = 98/213 (46%), Gaps = 29/213 (13%)

Query: 339 GSGGFGRVYRGLMPSLG-----LEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLH 393
           G G FG+V+     +L      + VA+K +   S+   ++F  E   +  L+H+++V+  
Sbjct: 50  GEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFF 109

Query: 394 GWCRKQDELLLVYDYVPNGSLDKLL----------FDKDHKLRKLLTWDQRYKILIGIAQ 443
           G C +   LL+V++Y+ +G L++ L             +      L   Q   +   +A 
Sbjct: 110 GVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAA 169

Query: 444 SLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IYEHGANPQTTHIVGTLGY 502
            ++YL        VHRD+   N L+   L  K+GDFG+++ IY         + VG    
Sbjct: 170 GMVYLAG---LHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTD-----YYRVGGRTM 221

Query: 503 L-----APELTRTGKATTSTDVYSYGILMLEVA 530
           L      PE     K TT +DV+S+G+++ E+ 
Sbjct: 222 LPIRWMPPESILYRKFTTESDVWSFGVVLWEIF 254

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score =  121 bits (306), Expect = 7e-31
 Identities = 55/205 (26%), Positives = 94/205 (45%), Gaps = 15/205 (7%)

Query: 334 EQNLVGSGGFGRVYRGLMPSLG---LEVAIKRI-GHNSQQGMKEFVAEIMSMGRLRHRNL 389
              ++G G FG VY G         ++ AIK +      Q ++ F+ E + M  L H N+
Sbjct: 25  SDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNV 84

Query: 390 VQLHGWCRKQDE-LLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYL 448
           + L G     +    ++  Y+ +G L + +       ++  T        + +A+ + YL
Sbjct: 85  LALIGIMLPPEGLPHVLLPYMCHGDLLQFI----RSPQRNPTVKDLISFGLQVARGMEYL 140

Query: 449 HEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IYEHGANPQTTHIVGTL--GYLAP 505
            E   Q+ VHRD+   N +LD     K+ DFGLA+ I +        H    L   + A 
Sbjct: 141 AE---QKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTAL 197

Query: 506 ELTRTGKATTSTDVYSYGILMLEVA 530
           E  +T + TT +DV+S+G+L+ E+ 
Sbjct: 198 ESLQTYRFTTKSDVWSFGVLLWELL 222

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score =  121 bits (306), Expect = 7e-31
 Identities = 59/214 (27%), Positives = 100/214 (46%), Gaps = 30/214 (14%)

Query: 339 GSGGFGRVYRGLMPSLG-----LEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLH 393
           G G FG+V+     +L      + VA+K +   +    K+F  E   +  L+H ++V+ +
Sbjct: 24  GEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFY 83

Query: 394 GWCRKQDELLLVYDYVPNGSLDKLL-----------FDKDHKLRKLLTWDQRYKILIGIA 442
           G C   D L++V++Y+ +G L+K L             +  + +  L   Q   I   IA
Sbjct: 84  GVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIA 143

Query: 443 QSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IYEHGANPQTTHIVGTLG 501
             ++YL     Q  VHRD+   N L+   L  K+GDFG+++ +Y         + VG   
Sbjct: 144 SGMVYLAS---QHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTD-----YYRVGGHT 195

Query: 502 YL-----APELTRTGKATTSTDVYSYGILMLEVA 530
            L      PE     K TT +DV+S+G+++ E+ 
Sbjct: 196 MLPIRWMPPESIMYRKFTTESDVWSFGVILWEIF 229

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score =  124 bits (314), Expect = 1e-30
 Identities = 55/199 (27%), Positives = 94/199 (47%), Gaps = 14/199 (7%)

Query: 339 GSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRK 398
           G+G FG V+         +VA+K +       ++ F+AE   M  L+H  LV+LH    K
Sbjct: 197 GAGQFGEVWMATYNKHT-KVAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK 254

Query: 399 QDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVH 458
            + + ++ +++  GSL   L   +          +       IA+ + ++ +   +  +H
Sbjct: 255 -EPIYIITEFMAKGSLLDFLKSDE---GSKQPLPKLIDFSAQIAEGMAFIEQ---RNYIH 307

Query: 459 RDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGY--LAPELTRTGKATTS 516
           RD++ +NIL+   L  K+ DFGLA++ E   N  T            APE    G  T  
Sbjct: 308 RDLRAANILVSASLVCKIADFGLARVIED--NEYTAREGAKFPIKWTAPEAINFGSFTIK 365

Query: 517 TDVYSYGILMLEVA-CGRR 534
           +DV+S+GIL++E+   GR 
Sbjct: 366 SDVWSFGILLMEIVTYGRI 384

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score =  120 bits (304), Expect = 1e-30
 Identities = 60/214 (28%), Positives = 100/214 (46%), Gaps = 15/214 (7%)

Query: 332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQ 391
           +     +G G  G VY  +  + G EVAI+++    Q   +  + EI+ M   ++ N+V 
Sbjct: 22  YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 81

Query: 392 LHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEE 451
                   DEL +V +Y+  GSL  ++          +   Q   +     Q+L +LH  
Sbjct: 82  YLDSYLVGDELWVVMEYLAGGSLTDVV------TETCMDEGQIAAVCRECLQALEFLH-- 133

Query: 452 CNQRVVHRDVKPSNILLDTYLNAKLGDFGL-AKIYEHGANPQTTHIVGTLGYLAPELTRT 510
            + +V+HRD+K  NILL    + KL DFG  A+I    +   T  +VGT  ++APE+   
Sbjct: 134 -SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST--MVGTPYWMAPEVVTR 190

Query: 511 GKATTSTDVYSYGILMLEVACGR---RSIEPQKA 541
                  D++S GI+ +E+  G     +  P +A
Sbjct: 191 KAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA 224

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score =  126 bits (317), Expect = 2e-30
 Identities = 49/197 (24%), Positives = 94/197 (47%), Gaps = 14/197 (7%)

Query: 339 GSGGFGRVYRGLMPSLG---LEVAIK--RIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLH 393
           G G FG V++G+  S     + VAIK  +   +     ++F+ E ++M +  H ++V+L 
Sbjct: 399 GEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSV-REKFLQEALTMRQFDHPHIVKLI 457

Query: 394 GWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECN 453
           G    ++ + ++ +    G L   L  +   L               ++ +L YL     
Sbjct: 458 GVI-TENPVWIIMELCTLGELRSFLQVRKFSL----DLASLILYAYQLSTALAYLES--- 509

Query: 454 QRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKA 513
           +R VHRD+   N+L+ +    KLGDFGL++  E     + +     + ++APE     + 
Sbjct: 510 KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRF 569

Query: 514 TTSTDVYSYGILMLEVA 530
           T+++DV+ +G+ M E+ 
Sbjct: 570 TSASDVWMFGVCMWEIL 586

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score =  120 bits (304), Expect = 2e-30
 Identities = 58/214 (27%), Positives = 102/214 (47%), Gaps = 15/214 (7%)

Query: 332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQ 391
                 +G G  G V        G +VA+K +    QQ  +    E++ M   +H N+V+
Sbjct: 47  LDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVE 106

Query: 392 LHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEE 451
           ++      +EL ++ +++  G+L  ++       +  L  +Q   +   + Q+L YLH  
Sbjct: 107 MYKSYLVGEELWVLMEFLQGGALTDIV------SQVRLNEEQIATVCEAVLQALAYLH-- 158

Query: 452 CNQRVVHRDVKPSNILLDTYLNAKLGDFGL-AKIYEHGANPQTTHIVGTLGYLAPELTRT 510
             Q V+HRD+K  +ILL      KL DFG  A+I +     ++  +VGT  ++APE+   
Sbjct: 159 -AQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKS--LVGTPYWMAPEVISR 215

Query: 511 GKATTSTDVYSYGILMLEVACG---RRSIEPQKA 541
               T  D++S GI+++E+  G     S  P +A
Sbjct: 216 SLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQA 249

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score =  121 bits (306), Expect = 3e-30
 Identities = 56/198 (28%), Positives = 101/198 (51%), Gaps = 13/198 (6%)

Query: 332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQ 391
             +  ++G G FG+V++    + GL++A K I     +  +E   EI  M +L H NL+Q
Sbjct: 91  VSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQ 150

Query: 392 LHGWCRKQDELLLVYDYVPNGSL-DKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHE 450
           L+     +++++LV +YV  G L D+++ D+ +     LT       +  I + + ++H+
Sbjct: 151 LYDAFESKNDIVLVMEYVDGGELFDRII-DESYN----LTELDTILFMKQICEGIRHMHQ 205

Query: 451 ECNQRVVHRDVKPSNILLDTYLNA--KLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELT 508
                ++H D+KP NIL         K+ DFGLA+ Y+     +     GT  +LAPE+ 
Sbjct: 206 ---MYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKV--NFGTPEFLAPEVV 260

Query: 509 RTGKATTSTDVYSYGILM 526
                +  TD++S G++ 
Sbjct: 261 NYDFVSFPTDMWSVGVIA 278

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score =  122 bits (308), Expect = 4e-30
 Identities = 48/212 (22%), Positives = 87/212 (41%), Gaps = 23/212 (10%)

Query: 332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRL-RHRNLV 390
           F  ++++G G  G +    M     +VA+KRI     +       E+  +     H N++
Sbjct: 26  FCPKDVLGHGAEGTIVYRGMFD-NRDVAVKRI---LPECFSFADREVQLLRESDEHPNVI 81

Query: 391 QLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHE 450
           +     + +    +  +     +L + +  KD     L    +   +L      L +LH 
Sbjct: 82  RYFCTEKDRQFQYIAIELCA-ATLQEYVEQKDFAHLGL----EPITLLQQTTSGLAHLHS 136

Query: 451 ECNQRVVHRDVKPSNILL-----DTYLNAKLGDFGLAKIYEHG--ANPQTTHIVGTLGYL 503
                +VHRD+KP NIL+        + A + DFGL K    G  +  + + + GT G++
Sbjct: 137 ---LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWI 193

Query: 504 APEL---TRTGKATTSTDVYSYGILMLEVACG 532
           APE+         T + D++S G +   V   
Sbjct: 194 APEMLSEDCKENPTYTVDIFSAGCVFYYVISE 225

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score =  120 bits (302), Expect = 4e-30
 Identities = 53/209 (25%), Positives = 98/209 (46%), Gaps = 25/209 (11%)

Query: 339 GSGGFGRVYRGLMPSLG---LEVAIK--RIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLH 393
           G G FG V  G +       L+VA+K  ++ ++SQ+ ++EF++E   M    H N+++L 
Sbjct: 43  GEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLL 102

Query: 394 GWCRKQD-----ELLLVYDYVPNGSLDK-LLFDKDHKLRKLLTWDQRYKILIGIAQSLLY 447
           G C +       + +++  ++  G L   LL+ +     K +      K ++ IA  + Y
Sbjct: 103 GVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEY 162

Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IYEHGANPQTTHIVGTLGYL--- 503
           L     +  +HRD+   N +L   +   + DFGL+K IY         +  G +  +   
Sbjct: 163 LSN---RNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYS-----GDYYRQGRIAKMPVK 214

Query: 504 --APELTRTGKATTSTDVYSYGILMLEVA 530
             A E       T+ +DV+++G+ M E+A
Sbjct: 215 WIAIESLADRVYTSKSDVWAFGVTMWEIA 243

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score =  119 bits (301), Expect = 6e-30
 Identities = 60/220 (27%), Positives = 101/220 (45%), Gaps = 38/220 (17%)

Query: 335 QNLVGSGGFGRVYRGLMPSLGLE--VAIKRI--GHNSQQGMKEFVAEIMSMGRL-RHRNL 389
           Q+++G G FG+V +  +   GL    AIKR+    +     ++F  E+  + +L  H N+
Sbjct: 30  QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDD-HRDFAGELEVLCKLGHHPNI 88

Query: 390 VQLHGWCRKQDELLLVYDYVPNGSLDKLL-----------FDKDHKLRKLLTWDQRYKIL 438
           + L G C  +  L L  +Y P+G+L   L           F   +     L+  Q     
Sbjct: 89  INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 148

Query: 439 IGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK---IYEHGANPQTTH 495
             +A+ + YL +   ++ +HRD+   NIL+     AK+ DFGL++   +Y          
Sbjct: 149 ADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYV--------- 196

Query: 496 IVGTLGYL-----APELTRTGKATTSTDVYSYGILMLEVA 530
              T+G L     A E       TT++DV+SYG+L+ E+ 
Sbjct: 197 -KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIV 235

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score =  118 bits (299), Expect = 7e-30
 Identities = 50/206 (24%), Positives = 103/206 (50%), Gaps = 13/206 (6%)

Query: 332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQ 391
           +     +G G FG+VY+      G   A K I   S++ +++++ EI  +    H  +V+
Sbjct: 21  WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVK 80

Query: 392 LHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEE 451
           L G      +L ++ ++ P G++D ++     +L + LT  Q   +   + ++L +LH  
Sbjct: 81  LLGAYYHDGKLWIMIEFCPGGAVDAIM----LELDRGLTEPQIQVVCRQMLEALNFLH-- 134

Query: 452 CNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTG 511
            ++R++HRD+K  N+L+    + +L DFG++         + +  +GT  ++APE+    
Sbjct: 135 -SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDS-FIGTPYWMAPEVVMCE 192

Query: 512 KATTST-----DVYSYGILMLEVACG 532
               +      D++S GI ++E+A  
Sbjct: 193 TMKDTPYDYKADIWSLGITLIEMAQI 218

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score =  119 bits (301), Expect = 7e-30
 Identities = 55/209 (26%), Positives = 89/209 (42%), Gaps = 25/209 (11%)

Query: 339 GSGGFGRVYRGLMPSLG-----LEVAIKRI-GHNSQQGMKEFVAEIMSMGRLRHRNLVQL 392
           G G FG VY G +  +      L+VA+K +    S+Q   +F+ E + + +  H+N+V+ 
Sbjct: 39  GHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRC 98

Query: 393 HGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKL--RKLLTWDQRYKILIGIAQSLLYLHE 450
            G   +     ++ + +  G L   L +   +      L       +   IA    YL E
Sbjct: 99  IGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE 158

Query: 451 ECNQRVVHRDVKPSNILLDTY---LNAKLGDFGLAK-IYEHGANPQTTHIVGTLGYL--- 503
                 +HRD+   N LL        AK+GDFG+A+ IY         +  G    L   
Sbjct: 159 ---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAS-----YYRKGGCAMLPVK 210

Query: 504 --APELTRTGKATTSTDVYSYGILMLEVA 530
              PE    G  T+ TD +S+G+L+ E+ 
Sbjct: 211 WMPPEAFMEGIFTSKTDTWSFGVLLWEIF 239

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score =  119 bits (301), Expect = 8e-30
 Identities = 46/217 (21%), Positives = 81/217 (37%), Gaps = 29/217 (13%)

Query: 339 GSGGFGRVYRGLMPSLGLEVAIKRI----------------GHNSQQGMKEFVA-EIMSM 381
             G F ++   L        A+K+                    S +   +    E+  +
Sbjct: 40  NQGKFNKII--LCEKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQII 97

Query: 382 GRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDK---DHKLRKLLTWDQRYKIL 438
             +++   +   G     DE+ ++Y+Y+ N S+ K        D      +       I+
Sbjct: 98  TDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCII 157

Query: 439 IGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVG 498
             +  S  Y+H E N  + HRDVKPSNIL+D     KL DFG ++        + +   G
Sbjct: 158 KSVLNSFSYIHNEKN--ICHRDVKPSNILMDKNGRVKLSDFGESEYMVDK-KIKGS--RG 212

Query: 499 TLGYLAPEL--TRTGKATTSTDVYSYGILMLEVACGR 533
           T  ++ PE     +       D++S GI +  +    
Sbjct: 213 TYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNV 249

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score =  119 bits (300), Expect = 9e-30
 Identities = 53/210 (25%), Positives = 92/210 (43%), Gaps = 27/210 (12%)

Query: 339 GSGGFGRVYRGLMPSLG-----LEVAIK--RIGHNSQQGMKEFVAEIMSMGRLRHRNLVQ 391
           G G FG VY G+   +        VAIK      + ++   EF+ E   M      ++V+
Sbjct: 34  GQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRE-RIEFLNEASVMKEFNCHHVVR 92

Query: 392 LHGWCRKQDELLLVYDYVPNGSLDKLL-----FDKDHKLRKLLTWDQRYKILIGIAQSLL 446
           L G   +    L++ + +  G L   L        ++ +    +  +  ++   IA  + 
Sbjct: 93  LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMA 152

Query: 447 YLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLA-KIYEHGANPQTTHIVGTLGYL-- 503
           YL+     + VHRD+   N ++      K+GDFG+   IYE        +  G  G L  
Sbjct: 153 YLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD-----YYRKGGKGLLPV 204

Query: 504 ---APELTRTGKATTSTDVYSYGILMLEVA 530
              +PE  + G  TT +DV+S+G+++ E+A
Sbjct: 205 RWMSPESLKDGVFTTYSDVWSFGVVLWEIA 234

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score =  119 bits (300), Expect = 1e-29
 Identities = 54/203 (26%), Positives = 98/203 (48%), Gaps = 11/203 (5%)

Query: 332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRI-GHNSQQGMKEFVAEIMSMGRLRHRNLV 390
           F + + +G+G  G V++      GL +A K I          + + E+  +       +V
Sbjct: 35  FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 94

Query: 391 QLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHE 450
             +G      E+ +  +++  GSLD++L     K    +      K+ I + + L YL E
Sbjct: 95  GFYGAFYSDGEISICMEHMDGGSLDQVL-----KKAGRIPEQILGKVSIAVIKGLTYLRE 149

Query: 451 ECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRT 510
           +    ++HRDVKPSNIL+++    KL DFG++       +      VGT  Y++PE  + 
Sbjct: 150 KHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLI---DSMANSFVGTRSYMSPERLQG 204

Query: 511 GKATTSTDVYSYGILMLEVACGR 533
              +  +D++S G+ ++E+A GR
Sbjct: 205 THYSVQSDIWSMGLSLVEMAVGR 227

>1nls_A Concanavalin A; lectin, agglutinin; 0.94A {Canavalia ensiformis} SCOP: b.29.1.1 PDB: 1bxh_A* 1apn_A 1ces_A 1cjp_A* 1c57_A 1cvn_A* 1con_A 1dq1_A 1dq2_A 1dq4_A 1dq5_A 1dq6_A 1enq_A 1enr_A 1ens_A 1gic_A* 1dq0_A 1hqw_A 1gkb_A* 1i3h_A ... Length = 237

 Score =  116 bits (290), Expect = 2e-29
 Identities = 33/127 (25%), Positives = 62/127 (48%), Gaps = 15/127 (11%)

Query: 120 STRMLAVEFDIIQNTELIDINDNHVGIDISSLISSASEPASYYSGNNHRIPILLRSGDPI 179
           +  ++AVE D   NT++ D +  H+GIDI S+ S  +   +            +++G   
Sbjct: 1   ADTIVAVELDTYPNTDIGDPSYPHIGIDIKSVRSKKTAKWN------------MQNGKVG 48

Query: 180 QAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLITASHN 239
            A + Y+S +  ++     +  P      +S  +DL +V+ E++  G SASTGL   ++ 
Sbjct: 49  TAHIIYNSVDKRLSAV---VSYPNADSATVSYDVDLDNVLPEWVRVGLSASTGLYKETNT 105

Query: 240 VHGWSIS 246
           +  WS +
Sbjct: 106 ILSWSFT 112

>1nls_A Concanavalin A; lectin, agglutinin; 0.94A {Canavalia ensiformis} SCOP: b.29.1.1 PDB: 1bxh_A* 1apn_A 1ces_A 1cjp_A* 1c57_A 1cvn_A* 1con_A 1dq1_A 1dq2_A 1dq4_A 1dq5_A 1dq6_A 1enq_A 1enr_A 1ens_A 1gic_A* 1dq0_A 1hqw_A 1gkb_A* 1i3h_A ... Length = 237

 Score = 64.1 bits (155), Expect = 1e-11
 Identities = 27/107 (25%), Positives = 38/107 (35%), Gaps = 9/107 (8%)

Query: 13  YNGFLHANLSLEGAAYISTSGILTVTNKSEGLI------GHALYPNPLRFKTSNKSVAID 66
                  +L L+G A   T G L +T  S          G AL+  P+    S+  VA  
Sbjct: 132 QFSKDQKDLILQGDATTGTDGNLELTRVSSNGSPQGSSVGRALFYAPVHIWESSAVVA-S 190

Query: 67  FRTNFVFSILPKYPDLGGQGLAFIIISTN-RPENCLANQFLGLPNIT 112
           F   F F I          G+AF I + +    +    + LGL    
Sbjct: 191 FEATFTFLIKSPDSH-PADGIAFFISNIDSSIPSGSTGRLLGLFPDA 236

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score =  119 bits (301), Expect = 2e-29
 Identities = 50/191 (26%), Positives = 86/191 (45%), Gaps = 13/191 (6%)

Query: 339 GSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRK 398
           GSG FG V+R +  + G     K I             EI  M +L H  L+ LH     
Sbjct: 60  GSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFED 119

Query: 399 QDELLLVYDYVPNGSL-DKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVV 457
           + E++L+ +++  G L D++   +D+K    ++  +    +    + L ++HE     +V
Sbjct: 120 KYEMVLILEFLSGGELFDRIA-AEDYK----MSEAEVINYMRQACEGLKHMHE---HSIV 171

Query: 458 HRDVKPSNILLDTYLNA--KLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATT 515
           H D+KP NI+ +T   +  K+ DFGLA         +      T  + APE+        
Sbjct: 172 HLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKV--TTATAEFAAPEIVDREPVGF 229

Query: 516 STDVYSYGILM 526
            TD+++ G+L 
Sbjct: 230 YTDMWAIGVLG 240

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score =  118 bits (298), Expect = 3e-29
 Identities = 56/209 (26%), Positives = 89/209 (42%), Gaps = 25/209 (11%)

Query: 339 GSGGFGRVYRGLMPSLG-----LEVAIKRI-GHNSQQGMKEFVAEIMSMGRLRHRNLVQL 392
           G G FG VY G +  +      L+VA+K +    S+Q   +F+ E + + +  H+N+V+ 
Sbjct: 80  GHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRC 139

Query: 393 HGWCRKQDELLLVYDYVPNGSLDKLLFD--KDHKLRKLLTWDQRYKILIGIAQSLLYLHE 450
            G   +     ++ + +  G L   L +          L       +   IA    YL E
Sbjct: 140 IGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE 199

Query: 451 ECNQRVVHRDVKPSNILLDTY---LNAKLGDFGLAK-IYEHGANPQTTHIVGTLGYL--- 503
                 +HRD+   N LL        AK+GDFG+A+ IY  G      +  G    L   
Sbjct: 200 ---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAG-----YYRKGGCAMLPVK 251

Query: 504 --APELTRTGKATTSTDVYSYGILMLEVA 530
              PE    G  T+ TD +S+G+L+ E+ 
Sbjct: 252 WMPPEAFMEGIFTSKTDTWSFGVLLWEIF 280

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score =  117 bits (296), Expect = 3e-29
 Identities = 57/210 (27%), Positives = 95/210 (45%), Gaps = 27/210 (12%)

Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQ-QGMKEFVAEI-MSMGRLRHRNLVQLHGW 395
           +G G +G V + +    G  +A+KRI      +  K+ + ++ + M       +VQ +G 
Sbjct: 30  IGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGA 89

Query: 396 CRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQR 455
             ++ +  +  + + + S DK        L  ++  +   KI +   ++L +L E    +
Sbjct: 90  LFREGDCWICMELM-STSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKEN--LK 146

Query: 456 VVHRDVKPSNILLDTYLNAKLGDFG--------LAKIYEHGANPQTTHIVGTLGYLAPE- 506
           ++HRD+KPSNILLD   N KL DFG        +AK          T   G   Y+APE 
Sbjct: 147 IIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAK----------TRDAGCRPYMAPER 196

Query: 507 ---LTRTGKATTSTDVYSYGILMLEVACGR 533
                        +DV+S GI + E+A GR
Sbjct: 197 IDPSASRQGYDVRSDVWSLGITLYELATGR 226

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score =  117 bits (294), Expect = 4e-29
 Identities = 58/202 (28%), Positives = 98/202 (48%), Gaps = 11/202 (5%)

Query: 332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIG-HNSQQGMKEFVAEIMSMGRLRHRNLV 390
           F +   +G G FG V++G+       VAIK I    ++  +++   EI  + +     + 
Sbjct: 24  FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83

Query: 391 QLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHE 450
           + +G   K  +L ++ +Y+  GS   LL          L   Q   IL  I + L YLH 
Sbjct: 84  KYYGSYLKDTKLWIIMEYLGGGSALDLL------EPGPLDETQIATILREILKGLDYLH- 136

Query: 451 ECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRT 510
             +++ +HRD+K +N+LL  +   KL DFG+A         + T  VGT  ++APE+ + 
Sbjct: 137 --SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT-FVGTPFWMAPEVIKQ 193

Query: 511 GKATTSTDVYSYGILMLEVACG 532
               +  D++S GI  +E+A G
Sbjct: 194 SAYDSKADIWSLGITAIELARG 215

>1qmo_E Mannose binding lectin, FRIL; crosslink, hematopoietic progenitor, sugar complex; HET: MAN; 3.5A {Dolichos lab lab} SCOP: b.29.1.1 Length = 133

 Score =  111 bits (278), Expect = 4e-29
 Identities = 34/126 (26%), Positives = 58/126 (46%), Gaps = 15/126 (11%)

Query: 121 TRMLAVEFDIIQNTELIDINDNHVGIDISSLISSASEPASYYSGNNHRIPILLRSGDPIQ 180
           + ++AVEFD   N +  D N  H+GID++S+ S  +    + +G                
Sbjct: 1   SNVVAVEFDTYLNPDYGDPNYIHIGIDVNSIRSKVTAKWDWQNGKIA------------T 48

Query: 181 AWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLITASHNV 240
           A + Y+S    ++V+             +S  I+L +V+ E++  G SASTG     + V
Sbjct: 49  AHISYNSVSKRLSVTSYY---AGSKPATLSYDIELHTVLPEWVRVGLSASTGQDKERNTV 105

Query: 241 HGWSIS 246
           H WS +
Sbjct: 106 HSWSFT 111

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score =  116 bits (293), Expect = 6e-29
 Identities = 46/210 (21%), Positives = 85/210 (40%), Gaps = 26/210 (12%)

Query: 339 GSGGFGRVYRGLMPSLG---LEVAIK--RIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLH 393
           G G FG V    +       ++VA+K  +    +   ++EF+ E   M    H ++ +L 
Sbjct: 32  GKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLV 91

Query: 394 GWCRKQD------ELLLVYDYVPNGSLDK-LLFDKDHKLRKLLTWDQRYKILIGIAQSLL 446
           G   +          +++  ++ +G L   LL  +  +    L      + ++ IA  + 
Sbjct: 92  GVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGME 151

Query: 447 YLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLA-KIYEHGANPQTTHIVGTLGYL-- 503
           YL     +  +HRD+   N +L   +   + DFGL+ KIY         +  G    L  
Sbjct: 152 YLSS---RNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGD-----YYRQGCASKLPV 203

Query: 504 ---APELTRTGKATTSTDVYSYGILMLEVA 530
              A E       T  +DV+++G+ M E+ 
Sbjct: 204 KWLALESLADNLYTVHSDVWAFGVTMWEIM 233

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score =  115 bits (291), Expect = 6e-29
 Identities = 58/203 (28%), Positives = 91/203 (44%), Gaps = 17/203 (8%)

Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVA-EIMSMGRLRHRNLVQLHGW 395
            +G G +G V   +       VA+K +         E +  EI     L H N+V+ +G 
Sbjct: 14  TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73

Query: 396 CRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYK---ILIGIAQSLLYLHEEC 452
            R+ +   L  +Y   G L    FD+      +   D +     ++ G+     YLH   
Sbjct: 74  RREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVV----YLH--- 122

Query: 453 NQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTH-IVGTLGYLAPE-LTRT 510
              + HRD+KP N+LLD   N K+ DFGLA ++ +    +  + + GTL Y+APE L R 
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182

Query: 511 GKATTSTDVYSYGILMLEVACGR 533
                  DV+S GI++  +  G 
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGE 205

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score =  120 bits (302), Expect = 1e-28
 Identities = 52/192 (27%), Positives = 91/192 (47%), Gaps = 13/192 (6%)

Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +G+G FG V+R    + G   A K +    +   +    EI +M  LRH  LV LH    
Sbjct: 165 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 224

Query: 398 KQDELLLVYDYVPNGSL-DKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRV 456
             +E++++Y+++  G L +K+  + +      ++ D+  + +  + + L ++HE      
Sbjct: 225 DDNEMVMIYEFMSGGELFEKVADEHNK-----MSEDEAVEYMRQVCKGLCHMHE---NNY 276

Query: 457 VHRDVKPSNILLDTYLNA--KLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKAT 514
           VH D+KP NI+  T  +   KL DFGL    +   +       GT  + APE+       
Sbjct: 277 VHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQS--VKVTTGTAEFAAPEVAEGKPVG 334

Query: 515 TSTDVYSYGILM 526
             TD++S G+L 
Sbjct: 335 YYTDMWSVGVLS 346

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score =  115 bits (290), Expect = 1e-28
 Identities = 63/208 (30%), Positives = 94/208 (45%), Gaps = 12/208 (5%)

Query: 335 QNLVGSGGFGRVYRGLMPSLGLEVAIKRIG-HNSQQGMKEFVAEIMSMGRLRHRNLVQLH 393
           Q ++GSG    V          +VAIKRI     Q  M E + EI +M +  H N+V  +
Sbjct: 20  QEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYY 79

Query: 394 GWCRKQDELLLVYDYVPNGSLD---KLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHE 450
                +DEL LV   +  GS+    K +  K      +L       IL  + + L YLH 
Sbjct: 80  TSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH- 138

Query: 451 ECNQRVVHRDVKPSNILLDTYLNAKLGDFGL-AKIYEHGANPQTTH---IVGTLGYLAPE 506
                 +HRDVK  NILL    + ++ DFG+ A +   G   +       VGT  ++APE
Sbjct: 139 --KNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPE 196

Query: 507 LTRTGKA-TTSTDVYSYGILMLEVACGR 533
           +    +      D++S+GI  +E+A G 
Sbjct: 197 VMEQVRGYDFKADIWSFGITAIELATGA 224

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score =  117 bits (295), Expect = 1e-28
 Identities = 48/205 (23%), Positives = 75/205 (36%), Gaps = 16/205 (7%)

Query: 339 GSGGFGRVYRGLMPSLGLEVAIKRI--GHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWC 396
           G      V        G  V ++RI     S + +     E+       H N+V      
Sbjct: 36  GFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATF 95

Query: 397 RKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRV 456
              +EL +V  ++  GS   L+          +       IL G+ ++L Y+H       
Sbjct: 96  IADNELWVVTSFMAYGSAKDLI---CTHFMDGMNELAIAYILQGVLKALDYIHH---MGY 149

Query: 457 VHRDVKPSNILLDTYLNAKLGDFG-LAKIYEHGANPQTTHI-----VGTLGYLAPELTRT 510
           VHR VK S+IL+       L        +  HG   +  H      V  L +L+PE+ + 
Sbjct: 150 VHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQ 209

Query: 511 GKA--TTSTDVYSYGILMLEVACGR 533
                   +D+YS GI   E+A G 
Sbjct: 210 NLQGYDAKSDIYSVGITACELANGH 234

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score =  114 bits (288), Expect = 3e-28
 Identities = 58/203 (28%), Positives = 91/203 (44%), Gaps = 17/203 (8%)

Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVA-EIMSMGRLRHRNLVQLHGW 395
            +G G +G V   +       VA+K +         E +  EI     L H N+V+ +G 
Sbjct: 14  TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73

Query: 396 CRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYK---ILIGIAQSLLYLHEEC 452
            R+ +   L  +Y   G L    FD+      +   D +     ++ G+     YLH   
Sbjct: 74  RREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVV----YLH--- 122

Query: 453 NQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTH-IVGTLGYLAPE-LTRT 510
              + HRD+KP N+LLD   N K+ DFGLA ++ +    +  + + GTL Y+APE L R 
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182

Query: 511 GKATTSTDVYSYGILMLEVACGR 533
                  DV+S GI++  +  G 
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGE 205

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score =  115 bits (289), Expect = 4e-28
 Identities = 37/223 (16%), Positives = 71/223 (31%), Gaps = 28/223 (12%)

Query: 332 FGEQNLVGSGGFGRVYRGLMPSL-----GLEVAIKRIGHNSQQGMKEFVAEIMSMGRLR- 385
               +L+G G F +VY      L       +  +K           EF      M RL+ 
Sbjct: 67  VYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQ---KPANPWEFYIGTQLMERLKP 123

Query: 386 --HRNLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQ 443
                 ++ +     Q+  +LV +    G+L   +    +   K++         + +  
Sbjct: 124 SMQHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLY 183

Query: 444 SLLYLHEECNQRVVHRDVKPSNILL-----------DTYLNAKLGDFGLAKIYE-HGANP 491
            +  +H+     ++H D+KP N +L           D      L D G +   +      
Sbjct: 184 MIEQVHD---CEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGT 240

Query: 492 QTTHIVGTLGYLAPELTRTGKA-TTSTDVYSYGILMLEVACGR 533
             T    T G+   E+  + K      D +     +  +  G 
Sbjct: 241 IFTAKCETSGFQCVEM-LSNKPWNYQIDYFGVAATVYCMLFGT 282

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score =  114 bits (287), Expect = 5e-28
 Identities = 52/218 (23%), Positives = 96/218 (44%), Gaps = 34/218 (15%)

Query: 339 GSGGFGRVYRGLMPSLG-------LEVAIKRIGHN-SQQGMKEFVAEIMSMGRL-RHRNL 389
           G G FG+V       +        + VA+K +  + +++ + + V+E+  M  + +H+N+
Sbjct: 44  GEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNI 103

Query: 390 VQLHGWCRKQDELLLVYDYVPNGSL-----------DKLLFDKDHKLRKLLTWDQRYKIL 438
           + L G C +   L ++ +Y   G+L            +  +D +    + +T+       
Sbjct: 104 INLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCT 163

Query: 439 IGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLA-KIYEHGANPQTTHIV 497
             +A+ + YL     Q+ +HRD+   N+L+      K+ DFGLA  I          +  
Sbjct: 164 YQLARGMEYLAS---QKCIHRDLAARNVLVTENNVMKIADFGLARDINNID-----YYKK 215

Query: 498 GTLGYL-----APELTRTGKATTSTDVYSYGILMLEVA 530
            T G L     APE       T  +DV+S+G+LM E+ 
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 253

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score =  112 bits (283), Expect = 7e-28
 Identities = 53/202 (26%), Positives = 95/202 (47%), Gaps = 12/202 (5%)

Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQ-QGMKEFVAEI-MSMGRLRHRNLVQLHGW 395
           +G G +G V +      G  +A+KRI      Q  K  + ++ +SM  +     V  +G 
Sbjct: 15  LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 74

Query: 396 CRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQR 455
             ++ ++ +  + + + SLDK    +     + +  D   KI + I ++L +LH +    
Sbjct: 75  LFREGDVWICMELM-DTSLDKFY-KQVIDKGQTIPEDILGKIAVSIVKALEHLHSK--LS 130

Query: 456 VVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPE----LTRTG 511
           V+HRDVKPSN+L++     K+ DFG++       +       G   Y+APE         
Sbjct: 131 VIHRDVKPSNVLINALGQVKMCDFGISGYLV--DDVAKDIDAGCKPYMAPERINPELNQK 188

Query: 512 KATTSTDVYSYGILMLEVACGR 533
             +  +D++S GI M+E+A  R
Sbjct: 189 GYSVKSDIWSLGITMIELAILR 210

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score =  113 bits (284), Expect = 8e-28
 Identities = 52/219 (23%), Positives = 83/219 (37%), Gaps = 36/219 (16%)

Query: 339 GSGGFGRVYRGLMPSLG-----LEVAIK--RIGHNSQQGMKEFVAEIMSMGRL-RHRNLV 390
           G+G FG+V       L      + VA+K  +   +  +  +  ++E+  +  L  H N+V
Sbjct: 32  GAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTE-REALMSELKVLSYLGNHMNIV 90

Query: 391 QLHGWCRKQDELLLVYDYVPNGSLDKLL-------------FDKDHKLRKLLTWDQRYKI 437
            L G C      L++ +Y   G L   L                       L  +     
Sbjct: 91  NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 150

Query: 438 LIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLA-KIYEHGANPQTTHI 496
              +A+ + +L     +  +HRD+   NILL      K+ DFGLA  I          ++
Sbjct: 151 SYQVAKGMAFLAS---KNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSN-----YV 202

Query: 497 VGTLGYL-----APELTRTGKATTSTDVYSYGILMLEVA 530
           V     L     APE       T  +DV+SYGI + E+ 
Sbjct: 203 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELF 241

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score =  113 bits (286), Expect = 8e-28
 Identities = 58/215 (26%), Positives = 89/215 (41%), Gaps = 32/215 (14%)

Query: 339 GSGGFGRVYRGLMPSLG-----LEVAIK--RIGHNSQQGMKEFVAEIMSMGRL-RHRNLV 390
           G+G FG+V       LG     L+VA+K  +   ++ +  +  ++E+  M  L +H N+V
Sbjct: 55  GAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADE-KEALMSELKIMSHLGQHENIV 113

Query: 391 QLHGWCRKQDELLLVYDYVPNGSL---------DKLLFDKDHKLRKLLTWDQRYKILIGI 441
            L G C     +L++ +Y   G L                        +          +
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQV 173

Query: 442 AQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLA-KIYEHGANPQTTHIVGTL 500
           AQ + +L     +  +HRDV   N+LL     AK+GDFGLA  I          +IV   
Sbjct: 174 AQGMAFLAS---KNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN-----YIVKGN 225

Query: 501 GYL-----APELTRTGKATTSTDVYSYGILMLEVA 530
             L     APE       T  +DV+SYGIL+ E+ 
Sbjct: 226 ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIF 260

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score =  113 bits (286), Expect = 1e-27
 Identities = 55/199 (27%), Positives = 89/199 (44%), Gaps = 22/199 (11%)

Query: 339 GSGGFGRVYRGLMPSLGLEVAIKRI------GHNSQQGMKEFVAEIMSMGRLRHRNLVQL 392
           GSG F  V +    S GLE A K I              +E   E+  + ++ H N++ L
Sbjct: 21  GSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITL 80

Query: 393 HGWCRKQDELLLVYDYVPNGSL-DKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEE 451
           H     + +++L+ + V  G L D L   K+      L+ ++    +  I   + YLH  
Sbjct: 81  HDVYENRTDVVLILELVSGGELFDFLA-QKES-----LSEEEATSFIKQILDGVNYLHT- 133

Query: 452 CNQRVVHRDVKPSNILL----DTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
             +++ H D+KP NI+L        + KL DFGLA   E G   +   I GT  ++APE+
Sbjct: 134 --KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN--IFGTPEFVAPEI 189

Query: 508 TRTGKATTSTDVYSYGILM 526
                     D++S G++ 
Sbjct: 190 VNYEPLGLEADMWSIGVIT 208

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score =  112 bits (283), Expect = 1e-27
 Identities = 56/223 (25%), Positives = 99/223 (44%), Gaps = 39/223 (17%)

Query: 339 GSGGFGRVYRGLMPSLG-----LEVAIKRI-GHNSQQGMKEFVAEIMSMGRLRHRNLVQL 392
           G G FG+V +     L        VA+K +  + S   +++ ++E   + ++ H ++++L
Sbjct: 32  GEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKL 91

Query: 393 HGWCRKQDELLLVYDYVPNGSL-------------------DKLLFDKDHKLRKLLTWDQ 433
           +G C +   LLL+ +Y   GSL                    +     DH   + LT   
Sbjct: 92  YGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGD 151

Query: 434 RYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLA-KIYEHGANPQ 492
                  I+Q + YL E    ++VHRD+   NIL+      K+ DFGL+  +YE      
Sbjct: 152 LISFAWQISQGMQYLAE---MKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEED---- 204

Query: 493 TTHIVGTLGYL-----APELTRTGKATTSTDVYSYGILMLEVA 530
            +++  + G +     A E       TT +DV+S+G+L+ E+ 
Sbjct: 205 -SYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIV 246

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score =  111 bits (280), Expect = 1e-27
 Identities = 51/198 (25%), Positives = 87/198 (43%), Gaps = 16/198 (8%)

Query: 332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQ 391
                 +G G +G V   +     +  A K+I     + +  F  EI  M  L H N+++
Sbjct: 13  LENT--IGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIR 70

Query: 392 LHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEE 451
           L+       ++ LV +    G     LF++    +++       +I+  +  ++ Y H+ 
Sbjct: 71  LYETFEDNTDIYLVMELCTGGE----LFERVVH-KRVFRESDAARIMKDVLSAVAYCHK- 124

Query: 452 CNQRVVHRDVKPSNILLDT---YLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELT 508
               V HRD+KP N L  T       KL DFGLA  ++ G   +T   VGT  Y++P++ 
Sbjct: 125 --LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRT--KVGTPYYVSPQVL 180

Query: 509 RTGKATTSTDVYSYGILM 526
             G      D +S G++M
Sbjct: 181 E-GLYGPECDEWSAGVMM 197

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score =  113 bits (285), Expect = 1e-27
 Identities = 52/218 (23%), Positives = 96/218 (44%), Gaps = 34/218 (15%)

Query: 339 GSGGFGRVYRGLMPSLG-------LEVAIKRIGHN-SQQGMKEFVAEIMSMGRL-RHRNL 389
           G G FG+V       +        + VA+K +  + +++ + + V+E+  M  + +H+N+
Sbjct: 90  GEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNI 149

Query: 390 VQLHGWCRKQDELLLVYDYVPNGSL-----------DKLLFDKDHKLRKLLTWDQRYKIL 438
           + L G C +   L ++ +Y   G+L            +  +D +    + +T+       
Sbjct: 150 INLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCT 209

Query: 439 IGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLA-KIYEHGANPQTTHIV 497
             +A+ + YL     Q+ +HRD+   N+L+      K+ DFGLA  I          +  
Sbjct: 210 YQLARGMEYLAS---QKCIHRDLAARNVLVTENNVMKIADFGLARDINNID-----YYKK 261

Query: 498 GTLGYL-----APELTRTGKATTSTDVYSYGILMLEVA 530
            T G L     APE       T  +DV+S+G+LM E+ 
Sbjct: 262 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 299

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score =  111 bits (281), Expect = 1e-27
 Identities = 56/202 (27%), Positives = 93/202 (46%), Gaps = 19/202 (9%)

Query: 332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVA-EIMSMGRLRHRNLV 390
           F  +  +GSG FG V+     S GLE  IK I  +  Q   E +  EI  +  L H N++
Sbjct: 26  FKRK--LGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNII 83

Query: 391 QLHGWCRKQDELLLVYDYVPNGSLDKLLFDK---DHKLRKLLTWDQRYKILIGIAQSLLY 447
           ++         + +V +    G L     ++        K L+     +++  +  +L Y
Sbjct: 84  KIFEVFEDYHNMYIVMETCEGGEL----LERIVSAQARGKALSEGYVAELMKQMMNALAY 139

Query: 448 LHEECNQRVVHRDVKPSNILLDT---YLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLA 504
            H    Q VVH+D+KP NIL      +   K+ DFGLA++++   +       GT  Y+A
Sbjct: 140 FHS---QHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTN--AAGTALYMA 194

Query: 505 PELTRTGKATTSTDVYSYGILM 526
           PE+ +    T   D++S G++M
Sbjct: 195 PEVFK-RDVTFKCDIWSAGVVM 215

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score =  113 bits (284), Expect = 2e-27
 Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 18/193 (9%)

Query: 339 GSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRK 398
           G G +    R +  +  +E A+K I  + +   +E   EI+     +H N++ L      
Sbjct: 31  GVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEE--IEILLRY-GQHPNIITLKDVYDD 87

Query: 399 QDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVH 458
              + +V + +  G L     DK  + +K  +  +   +L  I +++ YLH    Q VVH
Sbjct: 88  GKYVYVVTELMKGGEL----LDKILR-QKFFSEREASAVLFTITKTVEYLHA---QGVVH 139

Query: 459 RDVKPSNILL----DTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPE-LTRTGKA 513
           RD+KPSNIL         + ++ DFG AK          T    T  ++APE L R G  
Sbjct: 140 RDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMT-PCYTANFVAPEVLERQGY- 197

Query: 514 TTSTDVYSYGILM 526
             + D++S G+L+
Sbjct: 198 DAACDIWSLGVLL 210

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score =  111 bits (281), Expect = 3e-27
 Identities = 55/199 (27%), Positives = 89/199 (44%), Gaps = 22/199 (11%)

Query: 339 GSGGFGRVYRGLMPSLGLEVAIKRI------GHNSQQGMKEFVAEIMSMGRLRHRNLVQL 392
           GSG F  V +    S GLE A K I              +E   E+  + ++ H N++ L
Sbjct: 21  GSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITL 80

Query: 393 HGWCRKQDELLLVYDYVPNGSL-DKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEE 451
           H     + +++L+ + V  G L D L   K+      L+ ++    +  I   + YLH  
Sbjct: 81  HDVYENRTDVVLILELVSGGELFDFLA-QKES-----LSEEEATSFIKQILDGVNYLHT- 133

Query: 452 CNQRVVHRDVKPSNILL----DTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
             +++ H D+KP NI+L        + KL DFGLA   E G   +   I GT  ++APE+
Sbjct: 134 --KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN--IFGTPEFVAPEI 189

Query: 508 TRTGKATTSTDVYSYGILM 526
                     D++S G++ 
Sbjct: 190 VNYEPLGLEADMWSIGVIT 208

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score =  111 bits (280), Expect = 3e-27
 Identities = 49/217 (22%), Positives = 88/217 (40%), Gaps = 33/217 (15%)

Query: 339 GSGGFGRVYRGLMPSLG-----LEVAIKRIGHN-SQQGMKEFVAEIMSMGRL-RHRNLVQ 391
           G G FG+V       +        VA+K +    +    +  ++E+  +  +  H N+V 
Sbjct: 36  GRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 95

Query: 392 LHGWCRKQDE-LLLVYDYVPNGSL-----------DKLLFDKDHKLRKLLTWDQRYKILI 439
           L G C K    L+++ ++   G+L                  +   +  LT +       
Sbjct: 96  LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSF 155

Query: 440 GIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLA-KIYEHGANPQTTHIVG 498
            +A+ + +L     ++ +HRD+   NILL      K+ DFGLA  IY+        ++  
Sbjct: 156 QVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP-----DYVRK 207

Query: 499 TLGYL-----APELTRTGKATTSTDVYSYGILMLEVA 530
               L     APE       T  +DV+S+G+L+ E+ 
Sbjct: 208 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF 244

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score =  111 bits (279), Expect = 3e-27
 Identities = 55/197 (27%), Positives = 88/197 (44%), Gaps = 14/197 (7%)

Query: 339 GSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRK 398
           GSG F  V+       G   A+K I  +          EI  + +++H N+V L      
Sbjct: 18  GSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYES 77

Query: 399 QDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVH 458
                LV   V  G     LFD+  + R + T      ++  +  ++ YLHE     +VH
Sbjct: 78  TTHYYLVMQLVSGGE----LFDRILE-RGVYTEKDASLVIQQVLSAVKYLHE---NGIVH 129

Query: 459 RDVKPSNILLDTY---LNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATT 515
           RD+KP N+L  T        + DFGL+K+ ++G     +   GT GY+APE+      + 
Sbjct: 130 RDLKPENLLYLTPEENSKIMITDFGLSKMEQNG---IMSTACGTPGYVAPEVLAQKPYSK 186

Query: 516 STDVYSYGILMLEVACG 532
           + D +S G++   + CG
Sbjct: 187 AVDCWSIGVITYILLCG 203

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score =  110 bits (277), Expect = 4e-27
 Identities = 57/199 (28%), Positives = 88/199 (44%), Gaps = 22/199 (11%)

Query: 339 GSGGFGRVYRGLMPSLGLEVAIKRI------GHNSQQGMKEFVAEIMSMGRLRHRNLVQL 392
           GSG F  V +      G E A K I              +E   E+  +  +RH N++ L
Sbjct: 14  GSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITL 73

Query: 393 HGWCRKQDELLLVYDYVPNGSL-DKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEE 451
           H     + +++L+ + V  G L D L  +K+      LT D+  + L  I   + YLH  
Sbjct: 74  HDIFENKTDVVLILELVSGGELFDFLA-EKES-----LTEDEATQFLKQILDGVHYLHS- 126

Query: 452 CNQRVVHRDVKPSNILLDTYLNA----KLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
             +R+ H D+KP NI+L          KL DFG+A   E G   +   I GT  ++APE+
Sbjct: 127 --KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKN--IFGTPEFVAPEI 182

Query: 508 TRTGKATTSTDVYSYGILM 526
                     D++S G++ 
Sbjct: 183 VNYEPLGLEADMWSIGVIT 201

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score =  111 bits (279), Expect = 5e-27
 Identities = 44/192 (22%), Positives = 88/192 (45%), Gaps = 14/192 (7%)

Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +G G FG V+R +  S       K +             EI  +   RHRN++ LH    
Sbjct: 13  LGRGEFGIVHRCVETSSKKTYMAKFV-KVKGTDQVLVKKEISILNIARHRNILHLHESFE 71

Query: 398 KQDELLLVYDYVPNGSL-DKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRV 456
             +EL+++++++    + +++           L   +    +  + ++L +LH      +
Sbjct: 72  SMEELVMIFEFISGLDIFERINTSAFE-----LNEREIVSYVHQVCEALQFLHS---HNI 123

Query: 457 VHRDVKPSNILLDTYLNA--KLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKAT 514
            H D++P NI+  T  ++  K+ +FG A+  + G N +   +     Y APE+ +    +
Sbjct: 124 GHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRL--LFTAPEYYAPEVHQHDVVS 181

Query: 515 TSTDVYSYGILM 526
           T+TD++S G L+
Sbjct: 182 TATDMWSLGTLV 193

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score =  112 bits (281), Expect = 5e-27
 Identities = 56/202 (27%), Positives = 88/202 (43%), Gaps = 22/202 (10%)

Query: 339 GSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVA-EIMSMGRLRHRNLVQLHGWCR 397
           GSG FG             VA+K I       + E V  EI++   LRH N+V+      
Sbjct: 29  GSGNFGVARLMRDKLTKELVAVKYI--ERGAAIDENVQREIINHRSLRHPNIVRFKEVIL 86

Query: 398 KQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYK---ILIGIAQSLLYLHEECNQ 454
               L ++ +Y   G L    +++     +    + R+    +L G++    Y H   + 
Sbjct: 87  TPTHLAIIMEYASGGEL----YERICNAGRFSEDEARFFFQQLLSGVS----YCH---SM 135

Query: 455 RVVHRDVKPSNILLD--TYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPE-LTRTG 511
           ++ HRD+K  N LLD       K+ DFG +K     + P++T  VGT  Y+APE L R  
Sbjct: 136 QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLLRQE 193

Query: 512 KATTSTDVYSYGILMLEVACGR 533
                 DV+S G+ +  +  G 
Sbjct: 194 YDGKIADVWSCGVTLYVMLVGA 215

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score =  112 bits (282), Expect = 6e-27
 Identities = 50/218 (22%), Positives = 97/218 (44%), Gaps = 34/218 (15%)

Query: 339 GSGGFGRVYRGL-------MPSLGLEVAIKRIGHN-SQQGMKEFVAEIMSMGRL-RHRNL 389
           G G FG+V            P+   +VA+K +  + +++ + + ++E+  M  + +H+N+
Sbjct: 78  GEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNI 137

Query: 390 VQLHGWCRKQDELLLVYDYVPNGSL-----------DKLLFDKDHKLRKLLTWDQRYKIL 438
           + L G C +   L ++ +Y   G+L            +  ++  H   + L+        
Sbjct: 138 INLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCA 197

Query: 439 IGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLA-KIYEHGANPQTTHIV 497
             +A+ + YL     ++ +HRD+   N+L+      K+ DFGLA  I+         +  
Sbjct: 198 YQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID-----YYKK 249

Query: 498 GTLGYL-----APELTRTGKATTSTDVYSYGILMLEVA 530
            T G L     APE       T  +DV+S+G+L+ E+ 
Sbjct: 250 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIF 287

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score =  112 bits (283), Expect = 6e-27
 Identities = 54/223 (24%), Positives = 88/223 (39%), Gaps = 34/223 (15%)

Query: 336 NLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRL-RHRNLVQLHG 394
            ++G G  G V        G  VA+KR+           + EI  +     H N+++ + 
Sbjct: 21  KILGYGSSGTVVFQGSFQ-GRPVAVKRM---LIDFCDIALMEIKLLTESDDHPNVIRYYC 76

Query: 395 WCRKQDELLLVYDYVPNGSLDKLLFDKD--HKLRKLLTWDQRYKILIGIAQSLLYLHEEC 452
                  L +  +   N +L  L+  K+   +  KL        +L  IA  + +LH   
Sbjct: 77  SETTDRFLYIALELC-NLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS-- 133

Query: 453 NQRVVHRDVKPSNILLDT-------------YLNAKLGDFGLAKIYEHGANPQTTH---I 496
             +++HRD+KP NIL+ T              L   + DFGL K  + G +   T+    
Sbjct: 134 -LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNP 192

Query: 497 VGTLGYLAPEL-------TRTGKATTSTDVYSYGILMLEVACG 532
            GT G+ APEL           + T S D++S G +   +   
Sbjct: 193 SGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSK 235

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score =  109 bits (275), Expect = 1e-26
 Identities = 56/204 (27%), Positives = 89/204 (43%), Gaps = 26/204 (12%)

Query: 339 GSGGFGRVYRGLMPSLGLEVAIKRI--------GHNSQQGMKEFVA-EIMSMGRL-RHRN 388
           G G    V R +      E A+K I             Q ++E    E+  + ++  H N
Sbjct: 26  GRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPN 85

Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYL 448
           ++QL           LV+D +  G L    FD   + +  L+  +  KI+  + + +  L
Sbjct: 86  IIQLKDTYETNTFFFLVFDLMKKGEL----FDYLTE-KVTLSEKETRKIMRALLEVICAL 140

Query: 449 HEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELT 508
           H+     +VHRD+KP NILLD  +N KL DFG +   + G   +   + GT  YLAPE+ 
Sbjct: 141 HK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRE--VCGTPSYLAPEII 195

Query: 509 RTGKATTST------DVYSYGILM 526
                          D++S G++M
Sbjct: 196 ECSMNDNHPGYGKEVDMWSTGVIM 219

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score =  111 bits (278), Expect = 1e-26
 Identities = 33/240 (13%), Positives = 70/240 (29%), Gaps = 52/240 (21%)

Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQG---MKEFVAEIMSMGRLR-------- 385
           ++G               G    +       +     +K+   E++ +  LR        
Sbjct: 80  VLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQA 139

Query: 386 -----------------HRNLVQLHGWCRKQDE----LLLVYDYVPNGSLDKLLFDKDHK 424
                             + ++++    R         L         +  ++L      
Sbjct: 140 KVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHS-S 198

Query: 425 LRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKI 484
             K L    R ++ + + + L  LH   +  +VH  ++P +I+LD      L  F     
Sbjct: 199 THKSLVHHARLQLTLQVIRLLASLH---HYGLVHTYLRPVDIVLDQRGGVFLTGFEHLV- 254

Query: 485 YEHGANPQTTHIVGTLGYLAPELT-----------RTGKATTSTDVYSYGILMLEVACGR 533
                +        + G+  PEL            R    T S D ++ G+++  + C  
Sbjct: 255 ----RDGARVVSSVSRGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCAD 310

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score =  111 bits (279), Expect = 2e-26
 Identities = 65/260 (25%), Positives = 103/260 (39%), Gaps = 41/260 (15%)

Query: 290 IIAGAIHVLQRIKYADKMLEDWEIQCGARRFKYAELASVTKGFGEQNLVGSGGFGRVYRG 349
            IA ++   +   + D  ++D  +   A R +Y           +   +GSG  G V   
Sbjct: 105 EIALSLSRNKVFVFFDLTVDDQSVYPKALRDEYI--------MSKT--LGSGACGEVKLA 154

Query: 350 LMPSLGLEVAIKRI--------GHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDE 401
                  +VAI+ I                     EI  + +L H  ++++  +   +D 
Sbjct: 155 FERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED- 213

Query: 402 LLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDV 461
             +V + +  G L    FDK     K L           +  ++ YLHE     ++HRD+
Sbjct: 214 YYIVLELMEGGEL----FDKVVG-NKRLKEATCKLYFYQMLLAVQYLHE---NGIIHRDL 265

Query: 462 KPSNILLDTY---LNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPE-LTRTGKA--TT 515
           KP N+LL +       K+ DFG +KI    +  +T  + GT  YLAPE L   G A    
Sbjct: 266 KPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT--LCGTPTYLAPEVLVSVGTAGYNR 323

Query: 516 STDVYSYG-IL--MLEVACG 532
           + D +S G IL   L    G
Sbjct: 324 AVDCWSLGVILFICL---SG 340

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score =  108 bits (272), Expect = 2e-26
 Identities = 55/193 (28%), Positives = 89/193 (46%), Gaps = 15/193 (7%)

Query: 339 GSGGFGRVYRGLMPSLGLEVAIKRIG--HNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWC 396
           G G F  V R +  + GLE A K I     S +  ++   E     +L+H N+V+LH   
Sbjct: 15  GKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSI 74

Query: 397 RKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRV 456
           +++    LV+D V  G L    F+     R+  +       +  I +S+ Y H      +
Sbjct: 75  QEESFHYLVFDLVTGGEL----FEDIVA-REFYSEADASHCIQQILESIAYCHS---NGI 126

Query: 457 VHRDVKPSNILLDTYLNA---KLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKA 513
           VHR++KP N+LL +       KL DFGLA               GT GYL+PE+ +    
Sbjct: 127 VHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS--EAWHGFAGTPGYLSPEVLKKDPY 184

Query: 514 TTSTDVYSYGILM 526
           +   D+++ G+++
Sbjct: 185 SKPVDIWACGVIL 197

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score =  109 bits (275), Expect = 2e-26
 Identities = 52/224 (23%), Positives = 91/224 (40%), Gaps = 41/224 (18%)

Query: 339 GSGGFGRVYRGLMPSLG-----LEVAIK--RIGHNSQQGMKEFVAEIMSMGRLRHRNLVQ 391
           G G FGRV++   P L        VA+K  +   ++     +F  E   M    + N+V+
Sbjct: 56  GEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADM-QADFQREAALMAEFDNPNIVK 114

Query: 392 LHGWCRKQDELLLVYDYVPNGSLDKLL-------------------FDKDHKLRKLLTWD 432
           L G C     + L+++Y+  G L++ L                             L+  
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCA 174

Query: 433 QRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLA-KIYEHGANP 491
           ++  I   +A  + YL E   ++ VHRD+   N L+   +  K+ DFGL+  IY      
Sbjct: 175 EQLCIARQVAAGMAYLSE---RKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSAD--- 228

Query: 492 QTTHIVGTLGYL-----APELTRTGKATTSTDVYSYGILMLEVA 530
              +       +      PE     + TT +DV++YG+++ E+ 
Sbjct: 229 --YYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIF 270

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score =  108 bits (271), Expect = 3e-26
 Identities = 52/200 (26%), Positives = 90/200 (45%), Gaps = 18/200 (9%)

Query: 332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRI--GHNSQQGMKEFVAEIMSMGRLRHRNL 389
                 +G G FG V +        E A+K I       +     + E+  + +L H N+
Sbjct: 26  IVCM--LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNI 83

Query: 390 VQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLH 449
           ++L           +V +    G L    FD+  K RK  +     +I+  +   + Y+H
Sbjct: 84  MKLFEILEDSSSFYIVGELYTGGEL----FDEIIK-RKRFSEHDAARIIKQVFSGITYMH 138

Query: 450 EECNQRVVHRDVKPSNILLDT---YLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPE 506
           +     +VHRD+KP NILL++     + K+ DFGL+  ++     +    +GT  Y+APE
Sbjct: 139 K---HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKD--RIGTAYYIAPE 193

Query: 507 LTRTGKATTSTDVYSYGILM 526
           + R G      DV+S G+++
Sbjct: 194 VLR-GTYDEKCDVWSAGVIL 212

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score =  108 bits (273), Expect = 3e-26
 Identities = 53/195 (27%), Positives = 94/195 (48%), Gaps = 16/195 (8%)

Query: 339 GSGGFGRVYRGLMPSLGLEVAIKRIG--HNSQQGMKEFVAEIMSMGRLRHR-NLVQLHGW 395
           G G F  V + +  S G E A K +      Q    E + EI  +   +    ++ LH  
Sbjct: 38  GRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEV 97

Query: 396 CRKQDELLLVYDYVPNGSLDKLLFDK-DHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQ 454
                E++L+ +Y   G +    F     +L ++++ +   +++  I + + YLH+    
Sbjct: 98  YENTSEIILILEYAAGGEI----FSLCLPELAEMVSENDVIRLIKQILEGVYYLHQ---N 150

Query: 455 RVVHRDVKPSNILLDT---YLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTG 511
            +VH D+KP NILL +     + K+ DFG+++   H    +   I+GT  YLAPE+    
Sbjct: 151 NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELRE--IMGTPEYLAPEILNYD 208

Query: 512 KATTSTDVYSYGILM 526
             TT+TD+++ GI+ 
Sbjct: 209 PITTATDMWNIGIIA 223

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score =  109 bits (274), Expect = 4e-26
 Identities = 51/210 (24%), Positives = 89/210 (42%), Gaps = 37/210 (17%)

Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRI--------GHNSQQGMKEFVAEIMSMGRLR-HRN 388
           +G G    V R +  + G E A+K +            ++  +    E   + ++  H +
Sbjct: 102 IGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPH 161

Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRY------KILIGIA 442
           ++ L         + LV+D +  G L    FD        LT            I+  + 
Sbjct: 162 IITLIDSYESSSFMFLVFDLMRKGEL----FDY-------LTEKVALSEKETRSIMRSLL 210

Query: 443 QSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGY 502
           +++ +LH      +VHRD+KP NILLD  +  +L DFG +   E G   +   + GT GY
Sbjct: 211 EAVSFLHA---NNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRE--LCGTPGY 265

Query: 503 LAPELTRTGKATTST------DVYSYGILM 526
           LAPE+ +     T        D+++ G+++
Sbjct: 266 LAPEILKCSMDETHPGYGKEVDLWACGVIL 295

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score =  111 bits (279), Expect = 4e-26
 Identities = 53/201 (26%), Positives = 94/201 (46%), Gaps = 17/201 (8%)

Query: 339 GSGGFGRVYRGLMPSLGLEVAIKRI---GHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGW 395
           G G FG V        G E A+K I       +   +  + E+  + +L H N+++L+ +
Sbjct: 35  GKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEF 94

Query: 396 CRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQR 455
              +    LV +    G L    FD+    RK  +     +I+  +   + Y+H+    +
Sbjct: 95  FEDKGYFYLVGEVYTGGEL----FDEIIS-RKRFSEVDAARIIRQVLSGITYMHK---NK 146

Query: 456 VVHRDVKPSNILLDT---YLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGK 512
           +VHRD+KP N+LL++     N ++ DFGL+  +E     +    +GT  Y+APE+   G 
Sbjct: 147 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKD--KIGTAYYIAPEVLH-GT 203

Query: 513 ATTSTDVYSYGILMLEVACGR 533
                DV+S G+++  +  G 
Sbjct: 204 YDEKCDVWSTGVILYILLSGC 224

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score =  109 bits (273), Expect = 5e-26
 Identities = 64/207 (30%), Positives = 93/207 (44%), Gaps = 19/207 (9%)

Query: 332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRI---GHNSQQGMKEFVAEIMSMGRLRHRN 388
           F +   +G G FG VY          VAIK++   G  S +  ++ + E+  + +LRH N
Sbjct: 56  FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115

Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYL 448
            +Q  G   ++    LV +Y    + D L        +K L   +   +  G  Q L YL
Sbjct: 116 TIQYRGCYLREHTAWLVMEYCLGSASDLLEV-----HKKPLQEVEIAAVTHGALQGLAYL 170

Query: 449 HEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELT 508
           H   +  ++HRDVK  NILL      KLGDFG A I      P  +  VGT  ++APE+ 
Sbjct: 171 H---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASI----MAPANS-FVGTPYWMAPEVI 222

Query: 509 RTGKATT---STDVYSYGILMLEVACG 532
                       DV+S GI  +E+A  
Sbjct: 223 LAMDEGQYDGKVDVWSLGITCIELAER 249

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score =  108 bits (272), Expect = 5e-26
 Identities = 53/199 (26%), Positives = 89/199 (44%), Gaps = 22/199 (11%)

Query: 339 GSGGFGRVYRGLMPSLGLEVAIKRI------GHNSQQGMKEFVAEIMSMGRLRHRNLVQL 392
           GSG F  V +    S GL+ A K I              ++   E+  +  ++H N++ L
Sbjct: 20  GSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITL 79

Query: 393 HGWCRKQDELLLVYDYVPNGSL-DKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEE 451
           H     + +++L+ + V  G L D L  +K+      LT ++  + L  I   + YLH  
Sbjct: 80  HEVYENKTDVILILELVAGGELFDFLA-EKES-----LTEEEATEFLKQILNGVYYLHS- 132

Query: 452 CNQRVVHRDVKPSNILLDTYLNA----KLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
              ++ H D+KP NI+L          K+ DFGLA   + G   +   I GT  ++APE+
Sbjct: 133 --LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--IFGTPEFVAPEI 188

Query: 508 TRTGKATTSTDVYSYGILM 526
                     D++S G++ 
Sbjct: 189 VNYEPLGLEADMWSIGVIT 207

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score =  108 bits (272), Expect = 6e-26
 Identities = 54/223 (24%), Positives = 92/223 (41%), Gaps = 39/223 (17%)

Query: 339 GSGGFGRVYRGLMPSLG-----LEVAIKRIGHN-SQQGMKEFVAEIMSMGRL-RHRNLVQ 391
           GSG FG+V       +      ++VA+K +         +  ++E+  M +L  H N+V 
Sbjct: 54  GSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVN 113

Query: 392 LHGWCRKQDELLLVYDYVPNGSL------------------DKLLFDKDHKLRKLLTWDQ 433
           L G C     + L+++Y   G L                  +     ++ +   +LT++ 
Sbjct: 114 LLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFED 173

Query: 434 RYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLA-KIYEHGANPQ 492
                  +A+ + +L     +  VHRD+   N+L+      K+ DFGLA  I        
Sbjct: 174 LLCFAYQVAKGMEFLEF---KSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSN--- 227

Query: 493 TTHIVGTLGYL-----APELTRTGKATTSTDVYSYGILMLEVA 530
             ++V     L     APE    G  T  +DV+SYGIL+ E+ 
Sbjct: 228 --YVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIF 268

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score =  110 bits (277), Expect = 7e-26
 Identities = 57/235 (24%), Positives = 105/235 (44%), Gaps = 16/235 (6%)

Query: 305 DKMLEDWEIQCGARRFKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRI- 363
           + +    ++Q     F  ++   +++ +     +GSG +G V         +E AIK I 
Sbjct: 12  ENLYFQGDLQATPGMFITSKKGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIR 71

Query: 364 -GHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKD 422
               S     + + E+  +  L H N+++L+ +   +    LV +    G L    FD+ 
Sbjct: 72  KTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGEL----FDEI 127

Query: 423 HKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDT---YLNAKLGDF 479
              R          I+  +   + YLH+     +VHRD+KP N+LL++       K+ DF
Sbjct: 128 IH-RMKFNEVDAAVIIKQVLSGVTYLHK---HNIVHRDLKPENLLLESKEKDALIKIVDF 183

Query: 480 GLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRR 534
           GL+ ++E+    +    +GT  Y+APE+ R  K     DV+S G+++  +  G  
Sbjct: 184 GLSAVFENQKKMKE--RLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYP 235

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score =  108 bits (271), Expect = 8e-26
 Identities = 59/198 (29%), Positives = 88/198 (44%), Gaps = 17/198 (8%)

Query: 332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQ 391
              +  +G G    VYR          A+K +        K    EI  + RL H N+++
Sbjct: 57  VESE--LGRGATSIVYRCKQKGTQKPYALKVL--KKTVDKKIVRTEIGVLLRLSHPNIIK 112

Query: 392 LHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEE 451
           L        E+ LV + V  G     LFD+  + +   +       +  I +++ YLHE 
Sbjct: 113 LKEIFETPTEISLVLELVTGGE----LFDRIVE-KGYYSERDAADAVKQILEAVAYLHE- 166

Query: 452 CNQRVVHRDVKPSNILLDTYLNA---KLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELT 508
               +VHRD+KP N+L  T       K+ DFGL+KI EH    +T  + GT GY APE+ 
Sbjct: 167 --NGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKT--VCGTPGYCAPEIL 222

Query: 509 RTGKATTSTDVYSYGILM 526
           R        D++S GI+ 
Sbjct: 223 RGCAYGPEVDMWSVGIIT 240

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score =  107 bits (269), Expect = 9e-26
 Identities = 62/207 (29%), Positives = 94/207 (45%), Gaps = 20/207 (9%)

Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIK-----RIGHNSQQGMKEFVA-EIMSMGRLRHR--N 388
           L+GSGGFG VY G+  S  L VAIK     RI    +      V  E++ + ++      
Sbjct: 50  LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 109

Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYL 448
           +++L  W  + D  +L+ +  P    D  LFD   + R  L  +        + +++ + 
Sbjct: 110 VIRLLDWFERPDSFVLILER-PEPVQD--LFDFITE-RGALQEELARSFFWQVLEAVRHC 165

Query: 449 HEECNQRVVHRDVKPSNILLDT-YLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
           H   N  V+HRD+K  NIL+D      KL DFG   + +       T   GT  Y  PE 
Sbjct: 166 H---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV---YTDFDGTRVYSPPEW 219

Query: 508 TRTGK-ATTSTDVYSYGILMLEVACGR 533
            R  +    S  V+S GIL+ ++ CG 
Sbjct: 220 IRYHRYHGRSAAVWSLGILLYDMVCGD 246

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score =  106 bits (268), Expect = 9e-26
 Identities = 50/210 (23%), Positives = 88/210 (41%), Gaps = 24/210 (11%)

Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGH---NSQQGMKEFVA-EIMSMGRLRHRNLVQL 392
           L+G G +G+V   L        A+K +           +  V  EI  + RLRH+N++QL
Sbjct: 12  LLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQL 71

Query: 393 H---GWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYK---ILIGIAQSLL 446
                   KQ  + +V +Y   G  +  + D   + ++            ++ G+     
Sbjct: 72  VDVLYNEEKQK-MYMVMEYCVCGMQE--MLDSVPE-KRFPVCQAHGYFCQLIDGLE---- 123

Query: 447 YLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIV-GTLGYLAP 505
           YLH   +Q +VH+D+KP N+LL T    K+   G+A+     A   T     G+  +  P
Sbjct: 124 YLH---SQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPP 180

Query: 506 ELTRTGK--ATTSTDVYSYGILMLEVACGR 533
           E+       +    D++S G+ +  +  G 
Sbjct: 181 EIANGLDTFSGFKVDIWSAGVTLYNITTGL 210

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score =  107 bits (269), Expect = 1e-25
 Identities = 51/192 (26%), Positives = 86/192 (44%), Gaps = 16/192 (8%)

Query: 339 GSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLR-HRNLVQLHGWCR 397
           G G F    + +        A+K I    +   ++   EI ++     H N+V+LH    
Sbjct: 20  GEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQK---EITALKLCEGHPNIVKLHEVFH 76

Query: 398 KQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVV 457
            Q    LV + +  G L    F++  K +K  +  +   I+  +  ++ ++H+     VV
Sbjct: 77  DQLHTFLVMELLNGGEL----FERIKK-KKHFSETEASYIMRKLVSAVSHMHD---VGVV 128

Query: 458 HRDVKPSNILL---DTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKAT 514
           HRD+KP N+L    +  L  K+ DFG A++      P  T    TL Y APEL       
Sbjct: 129 HRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKT-PCFTLHYAAPELLNQNGYD 187

Query: 515 TSTDVYSYGILM 526
            S D++S G+++
Sbjct: 188 ESCDLWSLGVIL 199

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score =  107 bits (269), Expect = 1e-25
 Identities = 64/207 (30%), Positives = 97/207 (46%), Gaps = 24/207 (11%)

Query: 336 NLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVA--EIMSMGRLRHRNLVQLH 393
            LVG G +G V +      G  VAIK+   +    M + +A  EI  + +LRH NLV L 
Sbjct: 31  GLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLL 90

Query: 394 GWCRKQDELLLVYDYVPNGSLDKLLFDKDHKL-----RKLLTWDQRYKILIGIAQSLLYL 448
             C+K+    LV+++V + ++   L    + L     +K L     ++I+ GI     + 
Sbjct: 91  EVCKKKKRWYLVFEFVDH-TILDDLELFPNGLDYQVVQKYL-----FQIINGIG----FC 140

Query: 449 HEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQT-THIVGTLGYLAPE- 506
           H      ++HRD+KP NIL+      KL DFG A+     A  +     V T  Y APE 
Sbjct: 141 HS---HNIIHRDIKPENILVSQSGVVKLCDFGFARTL--AAPGEVYDDEVATRWYRAPEL 195

Query: 507 LTRTGKATTSTDVYSYGILMLEVACGR 533
           L    K   + DV++ G L+ E+  G 
Sbjct: 196 LVGDVKYGKAVDVWAIGCLVTEMFMGE 222

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score =  107 bits (268), Expect = 1e-25
 Identities = 55/216 (25%), Positives = 99/216 (45%), Gaps = 16/216 (7%)

Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNS-QQGMKEFVAEI-MSMGRLRHRNLVQLHGW 395
           +GSG  G+V++      G  +A+K++  +  ++  K  + ++ + +       +VQ  G 
Sbjct: 33  MGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGT 92

Query: 396 CRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQR 455
                ++ +  + +     +KL      +++  +      K+ + I ++L YL E+    
Sbjct: 93  FITNTDVFIAMELM-GTCAEKL----KKRMQGPIPERILGKMTVAIVKALYYLKEK--HG 145

Query: 456 VVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATT 515
           V+HRDVKPSNILLD     KL DFG++           +   G   Y+APE       T 
Sbjct: 146 VIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRS--AGCAAYMAPERIDPPDPTK 203

Query: 516 ST-----DVYSYGILMLEVACGRRSIEPQKAAAELL 546
                  DV+S GI ++E+A G+   +  K   E+L
Sbjct: 204 PDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVL 239

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score =  106 bits (267), Expect = 2e-25
 Identities = 54/206 (26%), Positives = 91/206 (44%), Gaps = 22/206 (10%)

Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMS----MGRLRHRNLVQL 392
           ++G G F  V      +   E AIK +         + V  +      M RL H   V+L
Sbjct: 37  ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENK-VPYVTRERDVMSRLDHPFFVKL 95

Query: 393 HGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQR-YKILIGIAQSLL---YL 448
           +   +  ++L     Y  NG L K +     K+        R Y      A+ +    YL
Sbjct: 96  YFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFY-----TAEIVSALEYL 146

Query: 449 HEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTH-IVGTLGYLAPEL 507
           H    + ++HRD+KP NILL+  ++ ++ DFG AK+    +     +  VGT  Y++PEL
Sbjct: 147 HG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPEL 203

Query: 508 TRTGKATTSTDVYSYGILMLEVACGR 533
                A  S+D+++ G ++ ++  G 
Sbjct: 204 LTEKSACKSSDLWALGCIIYQLVAGL 229

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score =  105 bits (264), Expect = 2e-25
 Identities = 60/203 (29%), Positives = 98/203 (48%), Gaps = 22/203 (10%)

Query: 339 GSGGFGRVYRGLMPSLGLEVAIKRI--GHNSQQGMKEFVA-EIMSMGRLRHRNLVQLHGW 395
           G G FG+V  G     G +VA+K +         +   +  EI ++   RH ++++L+  
Sbjct: 20  GVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQV 79

Query: 396 CRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYK---ILIGIAQSLLYLHEEC 452
                +  +V +YV  G L    FD   K  ++   + R     IL  +     Y H   
Sbjct: 80  ISTPTDFFMVMEYVSGGEL----FDYICKHGRVEEMEARRLFQQILSAVD----YCH--- 128

Query: 453 NQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGK 512
              VVHRD+KP N+LLD ++NAK+ DFGL+ +   G   +T+   G+  Y APE+   G+
Sbjct: 129 RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTS--CGSPNYAAPEVIS-GR 185

Query: 513 --ATTSTDVYSYGILMLEVACGR 533
             A    D++S G+++  + CG 
Sbjct: 186 LYAGPEVDIWSCGVILYALLCGT 208

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score =  106 bits (267), Expect = 2e-25
 Identities = 50/210 (23%), Positives = 89/210 (42%), Gaps = 24/210 (11%)

Query: 332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLR-HRNLV 390
             E  L G G   RV   +      E A+K I             E+  + + + HRN++
Sbjct: 16  LQEDVL-GEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVL 74

Query: 391 QLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHE 450
           +L  +  ++D   LV++ +  GS+        HK R+     +   ++  +A +L +LH 
Sbjct: 75  ELIEFFEEEDRFYLVFEKMRGGSI----LSHIHK-RRHFNELEASVVVQDVASALDFLH- 128

Query: 451 ECNQRVVHRDVKPSNILLDT---YLNAKLGDFGLAKIYEHG------ANPQTTHIVGTLG 501
             N+ + HRD+KP NIL +        K+ DF L    +        + P+     G+  
Sbjct: 129 --NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAE 186

Query: 502 YLAPELTRTGKATTST-----DVYSYGILM 526
           Y+APE+        S      D++S G+++
Sbjct: 187 YMAPEVVEAFSEEASIYDKRCDLWSLGVIL 216

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score =  109 bits (274), Expect = 2e-25
 Identities = 60/212 (28%), Positives = 92/212 (43%), Gaps = 27/212 (12%)

Query: 339 GSGGFGRVYRGLMPSLGLEVAIKRI-------------GHNSQQGMKEFVAEIMSMGRLR 385
           GSG +G V      +   E AIK I               N ++  +E   EI  +  L 
Sbjct: 45  GSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLD 104

Query: 386 HRNLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSL 445
           H N+++L      +    LV ++   G L    F++    R          I+  I   +
Sbjct: 105 HPNIIKLFDVFEDKKYFYLVTEFYEGGEL----FEQIIN-RHKFDECDAANIMKQILSGI 159

Query: 446 LYLHEECNQRVVHRDVKPSNILLDT---YLNAKLGDFGLAKIYEHGANPQTTHIVGTLGY 502
            YLH+     +VHRD+KP NILL+     LN K+ DFGL+  +      +    +GT  Y
Sbjct: 160 CYLHK---HNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRD--RLGTAYY 214

Query: 503 LAPELTRTGKATTSTDVYSYGILMLEVACGRR 534
           +APE+ +  K     DV+S G++M  + CG  
Sbjct: 215 IAPEVLK-KKYNEKCDVWSCGVIMYILLCGYP 245

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score =  106 bits (267), Expect = 2e-25
 Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 20/213 (9%)

Query: 332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRL-RHRNLV 390
           F    LVG+G +G+VY+G     G   AIK +     +  +E   EI  + +   HRN+ 
Sbjct: 26  FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDE-EEEIKQEINMLKKYSHHRNIA 84

Query: 391 QLHG------WCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQS 444
             +G           D+L LV ++   GS+  L+    +     L  +    I   I + 
Sbjct: 85  TYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLI---KNTKGNTLKEEWIAYICREILRG 141

Query: 445 LLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLA 504
           L +LH+    +V+HRD+K  N+LL      KL DFG++   +     + T  +GT  ++A
Sbjct: 142 LSHLHQ---HKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNT-FIGTPYWMA 197

Query: 505 PELTRTGKATTST-----DVYSYGILMLEVACG 532
           PE+    +   +T     D++S GI  +E+A G
Sbjct: 198 PEVIACDENPDATYDFKSDLWSLGITAIEMAEG 230

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score =  107 bits (268), Expect = 2e-25
 Identities = 54/243 (22%), Positives = 86/243 (35%), Gaps = 50/243 (20%)

Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRI-----GHNSQQGMKEFVAEIMSMGRLRHRNLVQL 392
           +G G +G V   +        AIK +        + + ++    E+  M +L H N+ +L
Sbjct: 34  IGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARL 93

Query: 393 HGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRY----------------- 435
           +     +  + LV +    G L   L             D                    
Sbjct: 94  YEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGS 153

Query: 436 ------------------KILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNA--K 475
                              I+  I  +L YLH    Q + HRD+KP N L  T  +   K
Sbjct: 154 IHGFRESLDFVQREKLISNIMRQIFSALHYLHN---QGICHRDIKPENFLFSTNKSFEIK 210

Query: 476 LGDFGLAKIYEHGANPQTTH---IVGTLGYLAPE-LTRTGKA-TTSTDVYSYGILMLEVA 530
           L DFGL+K +    N +        GT  ++APE L  T ++     D +S G+L+  + 
Sbjct: 211 LVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLL 270

Query: 531 CGR 533
            G 
Sbjct: 271 MGA 273

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score =  107 bits (269), Expect = 2e-25
 Identities = 57/196 (29%), Positives = 89/196 (45%), Gaps = 21/196 (10%)

Query: 339 GSGGFGRVYRGLMPSLGLEVAIKRIG--HNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWC 396
           G G F  V R +  + GLE A K I     S +  ++   E     +L+H N+V+LH   
Sbjct: 38  GKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSI 97

Query: 397 RKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRV 456
           +++    LV+D V  G L    F+     R+  +       +  I +S+ Y H      +
Sbjct: 98  QEESFHYLVFDLVTGGEL----FEDIVA-REFYSEADASHCIQQILESIAYCHS---NGI 149

Query: 457 VHRDVKPSNILLDTYLNA---KLGDFGLAKIYEHGANPQTTHIVGTLGYLAPE-LTRT-- 510
           VHR++KP N+LL +       KL DFGLA               GT GYL+PE L +   
Sbjct: 150 VHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS--EAWHGFAGTPGYLSPEVLKKDPY 207

Query: 511 GKATTSTDVYSYGILM 526
            K     D+++ G+++
Sbjct: 208 SKP---VDIWACGVIL 220

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score =  107 bits (270), Expect = 3e-25
 Identities = 67/218 (30%), Positives = 107/218 (49%), Gaps = 27/218 (12%)

Query: 328 VTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHR 387
               + +  ++G+G FG VY+  +   G  VAIK++     Q  +    E+  M +L H 
Sbjct: 52  QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHC 107

Query: 388 NLVQL----HGWCRKQDE--LLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQ----RYKI 437
           N+V+L    +    K+DE  L LV DYVP  ++ ++      + ++ L         Y++
Sbjct: 108 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVA-RHYSRAKQTLPVIYVKLYMYQL 165

Query: 438 LIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNA-KLGDFGLAKIYEHGANPQTTHI 496
                +SL Y+H   +  + HRD+KP N+LLD      KL DFG AK    G  P  ++I
Sbjct: 166 F----RSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSYI 217

Query: 497 VGTLGYLAPELT-RTGKATTSTDVYSYGILMLEVACGR 533
             +  Y APEL       T+S DV+S G ++ E+  G+
Sbjct: 218 C-SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score =  105 bits (265), Expect = 3e-25
 Identities = 53/204 (25%), Positives = 92/204 (45%), Gaps = 22/204 (10%)

Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVA--EIMSMGRLRHRNLVQLHGW 395
           +G G +G V++      G  VAIK+   +    + + +A  EI  + +L+H NLV L   
Sbjct: 11  IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70

Query: 396 CRKQDELLLVYDYVPNGSLDKLLFDKDHKL-----RKLLTWDQRYKILIGIAQSLLYLHE 450
            R++  L LV++Y  + ++   L      +     + +      ++ L  +     + H+
Sbjct: 71  FRRKRRLHLVFEYCDH-TVLHELDRYQRGVPEHLVKSIT-----WQTLQAVN----FCHK 120

Query: 451 ECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPE-LTR 509
                 +HRDVKP NIL+  +   KL DFG A++   G +      V T  Y +PE L  
Sbjct: 121 ---HNCIHRDVKPENILITKHSVIKLCDFGFARLL-TGPSDYYDDEVATRWYRSPELLVG 176

Query: 510 TGKATTSTDVYSYGILMLEVACGR 533
             +     DV++ G +  E+  G 
Sbjct: 177 DTQYGPPVDVWAIGCVFAELLSGV 200

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score =  107 bits (270), Expect = 4e-25
 Identities = 58/206 (28%), Positives = 91/206 (44%), Gaps = 28/206 (13%)

Query: 332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRI-----GHNSQQGMKEFVAEIMSMGRLRH 386
             E+  +G G F  V R +    G E A   I          Q ++    E      L+H
Sbjct: 15  LFEE--LGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLER---EARICRLLKH 69

Query: 387 RNLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLL 446
            N+V+LH    ++    L++D V  G L    F+     R+  +       +  I +++L
Sbjct: 70  PNIVRLHDSISEEGHHYLIFDLVTGGEL----FEDIVA-REYYSEADASHCIQQILEAVL 124

Query: 447 YLHEECNQRVVHRDVKPSNILLDTYLNA---KLGDFGLAKIYEHGANPQTTHIVGTLGYL 503
           + H+     VVHR++KP N+LL + L     KL DFGLA   E           GT GYL
Sbjct: 125 HCHQ---MGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFG-FAGTPGYL 180

Query: 504 APE-LTRT--GKATTSTDVYSYGILM 526
           +PE L +   GK     D+++ G+++
Sbjct: 181 SPEVLRKDPYGKP---VDLWACGVIL 203

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score =  106 bits (266), Expect = 7e-25
 Identities = 65/208 (31%), Positives = 103/208 (49%), Gaps = 28/208 (13%)

Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLH---- 393
           +G+G FG V++  +     EVAIK++     Q  +    E+  M  ++H N+V L     
Sbjct: 48  IGNGSFGVVFQAKLVESD-EVAIKKV----LQDKRFKNRELQIMRIVKHPNVVDLKAFFY 102

Query: 394 --GWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQ----RYKILIGIAQSLLY 447
             G  + +  L LV +YVP  ++ +       KL++ +         Y++L    +SL Y
Sbjct: 103 SNGDKKDEVFLNLVLEYVPE-TVYRAS-RHYAKLKQTMPMLLIKLYMYQLL----RSLAY 156

Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNA-KLGDFGLAKIYEHGANPQTTHIVGTLGYLAPE 506
           +H   +  + HRD+KP N+LLD      KL DFG AKI   G  P  ++I  +  Y APE
Sbjct: 157 IH---SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAG-EPNVSYIC-SRYYRAPE 211

Query: 507 LTRTGKA-TTSTDVYSYGILMLEVACGR 533
           L       TT+ D++S G +M E+  G+
Sbjct: 212 LIFGATNYTTNIDIWSTGCVMAELMQGQ 239

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score =  105 bits (263), Expect = 7e-25
 Identities = 57/199 (28%), Positives = 88/199 (44%), Gaps = 15/199 (7%)

Query: 339 GSGGFGRVYRGLMPSLGLEVAIKRI--GHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWC 396
           G G F +V        G EVAIK I     +   +++   E+  M  L H N+V+L    
Sbjct: 24  GKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVI 83

Query: 397 RKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRV 456
             +  L L+ +Y   G +    FD      ++   + R      I  ++ Y H    +R+
Sbjct: 84  ETEKTLYLIMEYASGGEV----FDYLVAHGRMKEKEAR-SKFRQIVSAVQYCH---QKRI 135

Query: 457 VHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGK--AT 514
           VHRD+K  N+LLD  +N K+ DFG +  +  G         G   Y APEL + GK    
Sbjct: 136 VHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAF--CGAPPYAAPELFQ-GKKYDG 192

Query: 515 TSTDVYSYGILMLEVACGR 533
              DV+S G+++  +  G 
Sbjct: 193 PEVDVWSLGVILYTLVSGS 211

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score =  106 bits (267), Expect = 1e-24
 Identities = 53/201 (26%), Positives = 91/201 (45%), Gaps = 16/201 (7%)

Query: 339 GSGGFGRVYRGLMPSLGLEVAIKRI--GHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWC 396
           G G FG V +        E A+K I       +     + E+  + +L H N+++L    
Sbjct: 31  GKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEIL 90

Query: 397 RKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRV 456
                  +V +    G L    FD+  K RK  +     +I+  +   + Y+H+     +
Sbjct: 91  EDSSSFYIVGELYTGGEL----FDEIIK-RKRFSEHDAARIIKQVFSGITYMHK---HNI 142

Query: 457 VHRDVKPSNILLDT---YLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKA 513
           VHRD+KP NILL++     + K+ DFGL+  ++     +    +GT  Y+APE+ R G  
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKD--RIGTAYYIAPEVLR-GTY 199

Query: 514 TTSTDVYSYGILMLEVACGRR 534
               DV+S G+++  +  G  
Sbjct: 200 DEKCDVWSAGVILYILLSGTP 220

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score =  103 bits (259), Expect = 2e-24
 Identities = 57/209 (27%), Positives = 89/209 (42%), Gaps = 22/209 (10%)

Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIK-----RIGHNSQQGMKEFVA-EIMSMGRLR----H 386
           L+G GGFG V+ G   +  L+VAIK     R+   S          E+  + ++     H
Sbjct: 38  LLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGH 97

Query: 387 RNLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLL 446
             +++L  W   Q+  +LV +        + LFD   + +  L           +  ++ 
Sbjct: 98  PGVIRLLDWFETQEGFMLVLERPLPA---QDLFDYITE-KGPLGEGPSRCFFGQVVAAIQ 153

Query: 447 YLHEECNQRVVHRDVKPSNILLDT-YLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAP 505
           + H   ++ VVHRD+K  NIL+D     AKL DFG   +      P T    GT  Y  P
Sbjct: 154 HCH---SRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDE--PYTDF-DGTRVYSPP 207

Query: 506 ELTRTGK-ATTSTDVYSYGILMLEVACGR 533
           E     +       V+S GIL+ ++ CG 
Sbjct: 208 EWISRHQYHALPATVWSLGILLYDMVCGD 236

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score =  103 bits (259), Expect = 2e-24
 Identities = 58/207 (28%), Positives = 91/207 (43%), Gaps = 29/207 (14%)

Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVA--EIMSMGRLRHRNLVQLHGW 395
           +G G +  VY+G        VA+K I    ++G     A  E+  +  L+H N+V LH  
Sbjct: 10  LGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGA-PCTAIREVSLLKDLKHANIVTLHDI 68

Query: 396 CRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLL--------Y 447
              +  L LV++Y+            D  L++ L  D    I +   +  L        Y
Sbjct: 69  IHTEKSLTLVFEYL------------DKDLKQYLD-DCGNIINMHNVKLFLFQLLRGLAY 115

Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
            H    Q+V+HRD+KP N+L++     KL DFGLA+           + V TL Y  P++
Sbjct: 116 CHR---QKVLHRDLKPQNLLINERGELKLADFGLARAK-SIPTKTYDNEVVTLWYRPPDI 171

Query: 508 TRTGKA-TTSTDVYSYGILMLEVACGR 533
                  +T  D++  G +  E+A GR
Sbjct: 172 LLGSTDYSTQIDMWGVGCIFYEMATGR 198

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score =  103 bits (260), Expect = 2e-24
 Identities = 49/205 (23%), Positives = 84/205 (40%), Gaps = 31/205 (15%)

Query: 339 GSGGFGRVYRGLMPSLGLEVAIKRI-----GHNSQQGMKEFVAEIMSMGRLRHRNLVQLH 393
           G G F  V R +    G + A+K +       +     ++   E      L+H ++V+L 
Sbjct: 33  GKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELL 92

Query: 394 GWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRY------KILIGIAQSLLY 447
                   L +V++++    L      +   + K       Y        +  I ++L Y
Sbjct: 93  ETYSSDGMLYMVFEFMDGADL----CFE---IVKRADAGFVYSEAVASHYMRQILEALRY 145

Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNA---KLGDFGLAKIYEHGANPQTTHIVGTLGYLA 504
            H+     ++HRDVKP  +LL +  N+   KLG FG+A              VGT  ++A
Sbjct: 146 CHD---NNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGG-RVGTPHFMA 201

Query: 505 PE-LTRT--GKATTSTDVYSYGILM 526
           PE + R   GK     DV+  G+++
Sbjct: 202 PEVVKREPYGKP---VDVWGCGVIL 223

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score =  106 bits (265), Expect = 2e-24
 Identities = 62/203 (30%), Positives = 100/203 (49%), Gaps = 22/203 (10%)

Query: 339 GSGGFGRVYRGLMPSLGLEVAIKRIGHNS--QQGMKEFVA-EIMSMGRLRHRNLVQLHGW 395
           G G FG+V  G     G +VA+K +         +   +  EI ++   RH ++++L+  
Sbjct: 25  GVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQV 84

Query: 396 CRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYK---ILIGIAQSLLYLHEEC 452
                ++ +V +YV  G L    FD   K  +L   + R     IL G+     Y H   
Sbjct: 85  ISTPSDIFMVMEYVSGGEL----FDYICKNGRLDEKESRRLFQQILSGVD----YCH--- 133

Query: 453 NQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGK 512
              VVHRD+KP N+LLD ++NAK+ DFGL+ +   G   +T+   G+  Y APE+   G+
Sbjct: 134 RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTS--CGSPNYAAPEVIS-GR 190

Query: 513 --ATTSTDVYSYGILMLEVACGR 533
             A    D++S G+++  + CG 
Sbjct: 191 LYAGPEVDIWSSGVILYALLCGT 213

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score =  103 bits (258), Expect = 2e-24
 Identities = 60/211 (28%), Positives = 89/211 (42%), Gaps = 31/211 (14%)

Query: 339 GSGGFGRVYRGLMPSLGLEVAIKRI-------GHNSQQGMKEFVA-EIMSMGRLRHRNLV 390
           GSG  G V          +VAIK I       G   +      V  EI  + +L H  ++
Sbjct: 19  GSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCII 78

Query: 391 QLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHE 450
           ++  +    ++  +V + +  G L    FDK     K L           +  ++ YLHE
Sbjct: 79  KIKNFF-DAEDYYIVLELMEGGEL----FDKVVG-NKRLKEATCKLYFYQMLLAVQYLHE 132

Query: 451 ECNQRVVHRDVKPSNILLDTY---LNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPE- 506
                ++HRD+KP N+LL +       K+ DFG +KI    +  +T  + GT  YLAPE 
Sbjct: 133 ---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT--LCGTPTYLAPEV 187

Query: 507 LTRTGKA--TTSTDVYSYG-IL--MLEVACG 532
           L   G A    + D +S G IL   L    G
Sbjct: 188 LVSVGTAGYNRAVDCWSLGVILFICL---SG 215

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score =  102 bits (256), Expect = 5e-24
 Identities = 41/173 (23%), Positives = 67/173 (38%), Gaps = 16/173 (9%)

Query: 367 SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLR 426
           S   M     +I  M     +N V        +  L +        +L   +        
Sbjct: 101 SPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWM--NRRCSL 158

Query: 427 KLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE 486
           +         I I IA+++ +LH   ++ ++HRD+KPSNI        K+GDFGL    +
Sbjct: 159 EDREHGVCLHIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMD 215

Query: 487 HGANPQT-----------THIVGTLGYLAPELTRTGKATTSTDVYSYGILMLE 528
                QT           T  VGT  Y++PE       +   D++S G+++ E
Sbjct: 216 QDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFE 268

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score =  102 bits (257), Expect = 5e-24
 Identities = 48/204 (23%), Positives = 83/204 (40%), Gaps = 25/204 (12%)

Query: 332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRL-RHRNLV 390
             +Q L G G  G+V        G + A+K +        ++   E+    +     ++V
Sbjct: 32  LSKQVL-GLGVNGKVLECFHRRTGQKCALKLL--YDSPKARQ---EVDHHWQASGGPHIV 85

Query: 391 QLHGWC----RKQDELLLVYDYVPNGSLDKLLFDK-DHKLRKLLTWDQRYKILIGIAQSL 445
            +          +  LL++ + +  G L    F +   +  +  T  +  +I+  I  ++
Sbjct: 86  CILDVYENMHHGKRCLLIIMECMEGGEL----FSRIQERGDQAFTEREAAEIMRDIGTAI 141

Query: 446 LYLHEECNQRVVHRDVKPSNILL-DTYLNA--KLGDFGLAKIYEHGANPQTTHIVGTLGY 502
            +LH      + HRDVKP N+L      +A  KL DFG AK               T  Y
Sbjct: 142 QFLHS---HNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQN---ALQTPCYTPYY 195

Query: 503 LAPELTRTGKATTSTDVYSYGILM 526
           +APE+    K   S D++S G++M
Sbjct: 196 VAPEVLGPEKYDKSCDMWSLGVIM 219

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score =  101 bits (254), Expect = 7e-24
 Identities = 61/219 (27%), Positives = 93/219 (42%), Gaps = 38/219 (17%)

Query: 336 NLVGSGGFGRVYRGLMPSLGLEVAIKRIG-HNSQQGMKEF----VAEIMSMGRLR---HR 387
             +G G +G VY+   P  G  VA+K +   N   G        V E+  + RL    H 
Sbjct: 15  AEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHP 74

Query: 388 NLVQLH-----GWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIA 442
           N+V+L          ++ ++ LV+++V            D  LR  L       +     
Sbjct: 75  NVVRLMDVCATSRTDREIKVTLVFEHV------------DQDLRTYLDKAPPPGLPAETI 122

Query: 443 QSLL--------YLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTT 494
           + L+        +LH      +VHRD+KP NIL+ +    KL DFGLA+IY        T
Sbjct: 123 KDLMRQFLRGLDFLHA---NCIVHRDLKPENILVTSGGTVKLADFGLARIY--SYQMALT 177

Query: 495 HIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGR 533
            +V TL Y APE+       T  D++S G +  E+   +
Sbjct: 178 PVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 216

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score =  100 bits (251), Expect = 1e-23
 Identities = 57/210 (27%), Positives = 97/210 (46%), Gaps = 32/210 (15%)

Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIG-HNSQQGMKEFVA--EIMSMGRLRHRNLVQLHG 394
           +G G +G V++         VA+KR+   +  +G+    A  EI  +  L+H+N+V+LH 
Sbjct: 10  IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGV-PSSALREICLLKELKHKNIVRLHD 68

Query: 395 WCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLL-------- 446
                 +L LV+++             D  L+K         +   I +S L        
Sbjct: 69  VLHSDKKLTLVFEFC------------DQDLKKYFD-SCNGDLDPEIVKSFLFQLLKGLG 115

Query: 447 YLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQT-THIVGTLGYLAP 505
           + H    + V+HRD+KP N+L++     KL +FGLA+ +  G   +  +  V TL Y  P
Sbjct: 116 FCHS---RNVLHRDLKPQNLLINRNGELKLANFGLARAF--GIPVRCYSAEVVTLWYRPP 170

Query: 506 ELTRTGKA-TTSTDVYSYGILMLEVACGRR 534
           ++    K  +TS D++S G +  E+A   R
Sbjct: 171 DVLFGAKLYSTSIDMWSAGCIFAELANAGR 200

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score =  101 bits (253), Expect = 2e-23
 Identities = 53/206 (25%), Positives = 83/206 (40%), Gaps = 22/206 (10%)

Query: 339 GSGGFGRVYRGLMPSLGLEVAIKRI--------GHNSQQGMKEFVAEIMSMGRLRHRNLV 390
           GSG FG V+  +      EV +K I               + +   EI  + R+ H N++
Sbjct: 33  GSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANII 92

Query: 391 QLHGWCRKQDELLLVYDYVPNGSLDKLLFDK-DHKLRKLLTWDQRYKILIGIAQSLLYLH 449
           ++      Q    LV +   +G LD  LF   D   R  L       I   +  ++ YL 
Sbjct: 93  KVLDIFENQGFFQLVMEKHGSG-LD--LFAFIDRHPR--LDEPLASYIFRQLVSAVGYLR 147

Query: 450 EECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTR 509
               + ++HRD+K  NI++      KL DFG A   E G    T    GT+ Y APE+  
Sbjct: 148 ---LKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTF--CGTIEYCAPEV-L 201

Query: 510 TGK--ATTSTDVYSYGILMLEVACGR 533
            G        +++S G+ +  +    
Sbjct: 202 MGNPYRGPELEMWSLGVTLYTLVFEE 227

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score =  101 bits (253), Expect = 2e-23
 Identities = 63/203 (31%), Positives = 98/203 (48%), Gaps = 23/203 (11%)

Query: 339 GSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVA-EIMSMGRLRHRNLVQLHGW 395
           G G FG+V          +VA+K I      +  M   V  EI  +  LRH ++++L+  
Sbjct: 18  GEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDV 77

Query: 396 CRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYK---ILIGIAQSLLYLHEEC 452
                ++++V +Y   G L    FD   + +++   + R     I+  I     Y H   
Sbjct: 78  ITTPTDIVMVIEYA-GGEL----FDYIVEKKRMTEDEGRRFFQQIICAIE----YCH--- 125

Query: 453 NQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGK 512
             ++VHRD+KP N+LLD  LN K+ DFGL+ I   G   +T+   G+  Y APE+   GK
Sbjct: 126 RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTS--CGSPNYAAPEVIN-GK 182

Query: 513 --ATTSTDVYSYGILMLEVACGR 533
             A    DV+S GI++  +  GR
Sbjct: 183 LYAGPEVDVWSCGIVLYVMLVGR 205

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score =  100 bits (252), Expect = 2e-23
 Identities = 57/219 (26%), Positives = 97/219 (44%), Gaps = 40/219 (18%)

Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIG-HNSQQGMKEFVA--EIMSMGRLRHRNLVQLHG 394
           +G G FG V++      G +VA+K++   N ++G     A  EI  +  L+H N+V L  
Sbjct: 25  IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFP-ITALREIKILQLLKHENVVNLIE 83

Query: 395 --------WCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLL 446
                   + R +  + LV+D+             +H L  LL+ +   K  +   + ++
Sbjct: 84  ICRTKASPYNRCKGSIYLVFDFC------------EHDLAGLLS-NVLVKFTLSEIKRVM 130

Query: 447 --------YLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQT---TH 495
                   Y+H     +++HRD+K +N+L+      KL DFGLA+ +    N Q    T+
Sbjct: 131 QMLLNGLYYIHR---NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTN 187

Query: 496 IVGTLGYLAPELTRTGKA-TTSTDVYSYGILMLEVACGR 533
            V TL Y  PEL    +      D++  G +M E+    
Sbjct: 188 RVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRS 226

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score =  100 bits (251), Expect = 3e-23
 Identities = 59/206 (28%), Positives = 92/206 (44%), Gaps = 23/206 (11%)

Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVA-----EIMSMGRLRHRNLVQL 392
           +G G F  VY+    +    VAIK+I    +   K+ +      EI  +  L H N++ L
Sbjct: 18  LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGL 77

Query: 393 HGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLR----KLLTWDQRYKILIGIAQSLLYL 448
                 +  + LV+D++    L+ ++ D    L     K          L G+     YL
Sbjct: 78  LDAFGHKSNISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYM----LMTLQGLE----YL 128

Query: 449 HEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELT 508
           H+     ++HRD+KP+N+LLD     KL DFGLAK +    N   TH V T  Y APEL 
Sbjct: 129 HQ---HWILHRDLKPNNLLLDENGVLKLADFGLAKSF-GSPNRAYTHQVVTRWYRAPELL 184

Query: 509 RTGKA-TTSTDVYSYGILMLEVACGR 533
              +      D+++ G ++ E+    
Sbjct: 185 FGARMYGVGVDMWAVGCILAELLLRV 210

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score =  100 bits (250), Expect = 4e-23
 Identities = 57/214 (26%), Positives = 101/214 (47%), Gaps = 38/214 (17%)

Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIG-HNSQQGMKEFVA--EIMSMGRLRHRNLVQLHG 394
           +G G +G VY+ +       VAIKRI   + ++G+    A  E+  +  L+HRN+++L  
Sbjct: 42  LGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGV-PGTAIREVSLLKELQHRNIIELKS 100

Query: 395 WCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLL-------- 446
                  L L+++Y             ++ L+K +  D+   + + + +S L        
Sbjct: 101 VIHHNHRLHLIFEYA------------ENDLKKYM--DKNPDVSMRVIKSFLYQLINGVN 146

Query: 447 YLHEECNQRVVHRDVKPSNILLDTYLNA-----KLGDFGLAKIYEHGANPQT-THIVGTL 500
           + H    +R +HRD+KP N+LL     +     K+GDFGLA+ +  G   +  TH + TL
Sbjct: 147 FCHS---RRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAF--GIPIRQFTHEIITL 201

Query: 501 GYLAPELTRTGKA-TTSTDVYSYGILMLEVACGR 533
            Y  PE+    +  +TS D++S   +  E+    
Sbjct: 202 WYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKT 235

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 99.0 bits (247), Expect = 4e-23
 Identities = 23/201 (11%), Positives = 59/201 (29%), Gaps = 41/201 (20%)

Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRI---GHNSQQGMKEFVAEIMSMGRLRHRNLVQLH 393
             G     + ++ L  +L  +VA+  +   G      ++E ++  + + R+    + ++ 
Sbjct: 38  FHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVL 97

Query: 394 GWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECN 453
                +   L+V +++  GSL ++            +     + +  +A +    H    
Sbjct: 98  DVVHTRAGGLVVAEWIRGGSLQEVA-------DTSPSPVGAIRAMQSLAAAADAAHR--- 147

Query: 454 QRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKA 513
             V      PS + +    +  L                          +         A
Sbjct: 148 AGVALSIDHPSRVRVSIDGDVVLAYP---------------------ATMPD-------A 179

Query: 514 TTSTDVYSYGILMLEVACGRR 534
               D+   G  +  +   R 
Sbjct: 180 NPQDDIRGIGASLYALLVNRW 200

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 99.6 bits (249), Expect = 4e-23
 Identities = 62/201 (30%), Positives = 109/201 (54%), Gaps = 12/201 (5%)

Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVA--EIMSMGRLRHRNLVQLHGW 395
           +G+G +  VY+GL  + G+ VA+K +  +S++G     A  EI  M  L+H N+V+L+  
Sbjct: 13  LGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGT-PSTAIREISLMKELKHENIVRLYDV 71

Query: 396 CRKQDELLLVYDYVPNGSLDKLLFDKDHKLRK-LLTWDQRYKILIGIAQSLLYLHEECNQ 454
              +++L LV++++ N  L K +  +        L  +        + Q L + HE    
Sbjct: 72  IHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHE---N 127

Query: 455 RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQT-THIVGTLGYLAPELTRTGKA 513
           +++HRD+KP N+L++     KLGDFGLA+ +  G    T +  V TL Y AP++    + 
Sbjct: 128 KILHRDLKPQNLLINKRGQLKLGDFGLARAF--GIPVNTFSSEVVTLWYRAPDVLMGSRT 185

Query: 514 -TTSTDVYSYGILMLEVACGR 533
            +TS D++S G ++ E+  G+
Sbjct: 186 YSTSIDIWSCGCILAEMITGK 206

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score =  100 bits (251), Expect = 6e-23
 Identities = 53/197 (26%), Positives = 86/197 (43%), Gaps = 23/197 (11%)

Query: 339 GSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRL-RHRNLVQLHGWC- 396
           G G  G+V +        + A+K +     Q   +   E+    R  +  ++V++     
Sbjct: 71  GLGINGKVLQIFNKRTQEKFALKML-----QDCPKARREVELHWRASQCPHIVRIVDVYE 125

Query: 397 ---RKQDELLLVYDYVPNGSLDKLLFDK-DHKLRKLLTWDQRYKILIGIAQSLLYLHEEC 452
                +  LL+V + +  G L    F +   +  +  T  +  +I+  I +++ YLH   
Sbjct: 126 NLYAGRKCLLIVMECLDGGEL----FSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS-- 179

Query: 453 NQRVVHRDVKPSNILL-DTYLNA--KLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTR 509
              + HRDVKP N+L      NA  KL DFG AK      N  TT    T  Y+APE+  
Sbjct: 180 -INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH-NSLTT-PCYTPYYVAPEVLG 236

Query: 510 TGKATTSTDVYSYGILM 526
             K   S D++S G++M
Sbjct: 237 PEKYDKSCDMWSLGVIM 253

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score = 98.0 bits (245), Expect = 8e-23
 Identities = 60/209 (28%), Positives = 102/209 (48%), Gaps = 33/209 (15%)

Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIG-HNSQQGMKEFVA--EIMSMGRLRHRNLVQLHG 394
           +G G +G VY+    + G   A+K+I      +G+       EI  +  L+H N+V+L+ 
Sbjct: 10  IGEGTYGVVYKA-QNNYGETFALKKIRLEKEDEGI-PSTTIREISILKELKHSNIVKLYD 67

Query: 395 WCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLL-------- 446
               +  L+LV++++            D  L+KLL       +    A+S L        
Sbjct: 68  VIHTKKRLVLVFEHL------------DQDLKKLLD-VCEGGLESVTAKSFLLQLLNGIA 114

Query: 447 YLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQT-THIVGTLGYLAP 505
           Y H+   +RV+HRD+KP N+L++     K+ DFGLA+ +  G   +  TH + TL Y AP
Sbjct: 115 YCHD---RRVLHRDLKPQNLLINREGELKIADFGLARAF--GIPVRKYTHEIVTLWYRAP 169

Query: 506 ELTRTGKA-TTSTDVYSYGILMLEVACGR 533
           ++    K  +T+ D++S G +  E+  G 
Sbjct: 170 DVLMGSKKYSTTIDIWSVGCIFAEMVNGT 198

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score = 99.3 bits (248), Expect = 1e-22
 Identities = 59/220 (26%), Positives = 99/220 (45%), Gaps = 23/220 (10%)

Query: 327 SVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRH 386
                F  + + G G FG V  G   S G+ VAIK++  + +   +E +  +  +  L H
Sbjct: 20  KEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRE-LQIMQDLAVLHH 78

Query: 387 RNLVQLH-----GWCRKQDE--LLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQ----RY 435
            N+VQL         R + +  L +V +YVP+ +L +      ++ +            +
Sbjct: 79  PNIVQLQSYFYTLGERDRRDIYLNVVMEYVPD-TLHRCC-RNYYRRQVAPPPILIKVFLF 136

Query: 436 KILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNA-KLGDFGLAKIYEHGANPQTT 494
           +++    +S+  LH      V HRD+KP N+L++      KL DFG AK       P   
Sbjct: 137 QLI----RSIGCLHLPS-VNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPS-EPNVA 190

Query: 495 HIVGTLGYLAPELTRTGKA-TTSTDVYSYGILMLEVACGR 533
           +I  +  Y APEL    +  TT+ D++S G +  E+  G 
Sbjct: 191 YIC-SRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGE 229

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score = 99.5 bits (248), Expect = 2e-22
 Identities = 60/246 (24%), Positives = 101/246 (41%), Gaps = 30/246 (12%)

Query: 305 DKMLEDWEIQCGARRFKYAELASVTKGFGEQNLVGSGGFGRVY--RGLMPSLGLEVAIKR 362
           DKM  D++++  + R +  +L        E   VG G +G VY  +        + A+K+
Sbjct: 1   DKMDYDFKVKLSSERERVEDLFEY-----EGCKVGRGTYGHVYKAKRKDGKDDKDYALKQ 55

Query: 363 IGHNSQQGM-KEFVAEIMSMGRLRHRNLVQLHGWC--RKQDELLLVYDYVPN---GSLDK 416
           I      G+      EI  +  L+H N++ L          ++ L++DY  +     +  
Sbjct: 56  IE---GTGISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKF 112

Query: 417 LLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNA-- 474
               K +K    L       +L  I   + YLH      V+HRD+KP+NIL+        
Sbjct: 113 HRASKANKKPVQLPRGMVKSLLYQILDGIHYLHA---NWVLHRDLKPANILVMGEGPERG 169

Query: 475 --KLGDFGLAKIYEHGANPQT--THIVGTLGYLAPEL---TRTGKATTSTDVYSYGILML 527
             K+ D G A+++     P      +V T  Y APEL    R    T + D+++ G +  
Sbjct: 170 RVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARH--YTKAIDIWAIGCIFA 227

Query: 528 EVACGR 533
           E+    
Sbjct: 228 ELLTSE 233

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 97.0 bits (242), Expect = 2e-22
 Identities = 54/230 (23%), Positives = 93/230 (40%), Gaps = 49/230 (21%)

Query: 339 GSGGFGRVYRGLMPSLGLEVAIK-------------------------RIGHNSQQGMKE 373
           G G +G V      +     A+K                           G    +G  E
Sbjct: 22  GKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIE 81

Query: 374 FVA-EIMSMGRLRHRNLVQLHG--WCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLT 430
            V  EI  + +L H N+V+L        +D L +V++ V  G +     +        L+
Sbjct: 82  QVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPV----MEVPTLKP--LS 135

Query: 431 WDQ--RY--KILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE 486
            DQ   Y   ++ GI     YLH    Q+++HRD+KPSN+L+    + K+ DFG++  ++
Sbjct: 136 EDQARFYFQDLIKGIE----YLH---YQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFK 188

Query: 487 HGANPQTTHIVGTLGYLAPELTRTGKAT---TSTDVYSYGILMLEVACGR 533
                 +   VGT  ++APE     +      + DV++ G+ +     G+
Sbjct: 189 GSDALLSN-TVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQ 237

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score = 97.2 bits (243), Expect = 2e-22
 Identities = 62/209 (29%), Positives = 102/209 (48%), Gaps = 33/209 (15%)

Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIG-HNSQQGMKEFVA--EIMSMGRLRHRNLVQLHG 394
           VG G +G VY+    S G  VA+KRI      +G+    A  EI  +  L H N+V L  
Sbjct: 29  VGEGTYGVVYKA-KDSQGRIVALKRIRLDAEDEGI-PSTAIREISLLKELHHPNIVSLID 86

Query: 395 WCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLL-------- 446
               +  L LV++++            +  L+K+L  + +  +     +  L        
Sbjct: 87  VIHSERCLTLVFEFM------------EKDLKKVLD-ENKTGLQDSQIKIYLYQLLRGVA 133

Query: 447 YLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQT-THIVGTLGYLAP 505
           + H+    R++HRD+KP N+L+++    KL DFGLA+ +  G   ++ TH V TL Y AP
Sbjct: 134 HCHQ---HRILHRDLKPQNLLINSDGALKLADFGLARAF--GIPVRSYTHEVVTLWYRAP 188

Query: 506 ELTRTGKA-TTSTDVYSYGILMLEVACGR 533
           ++    K  +TS D++S G +  E+  G+
Sbjct: 189 DVLMGSKKYSTSVDIWSIGCIFAEMITGK 217

>1qmo_A Mannose binding lectin, FRIL; crosslink, hematopoietic progenitor, sugar complex; HET: MAN; 3.5A {Dolichos lab lab} SCOP: b.29.1.1 Length = 113

 Score = 91.1 bits (226), Expect = 3e-22
 Identities = 30/113 (26%), Positives = 41/113 (36%), Gaps = 11/113 (9%)

Query: 6   ADTTSFLYNGFL--HANLSLEGAAYISTSGILTVTNKSEGL------IGHALYPNPLRFK 57
           A + SF +  F     +L  +G A  + + +L VT             G  LY  PLR  
Sbjct: 1   AQSLSFSFTKFDPNQEDLIFQGHATST-NNVLQVTKLDSAGNPVSSSAGRVLYSAPLRLW 59

Query: 58  TSNKSVAIDFRTNFVFSILPKYPDLGGQGLAFIIISTNRPENCLANQFLGLPN 110
             +  +   F T   F I   Y      GLAF I   +   +     FLGL  
Sbjct: 60  EDSAVLT-SFDTIINFEISTPYTSRIADGLAFFIAPPDSVIS-YHGGFLGLFP 110

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 98.3 bits (245), Expect = 9e-22
 Identities = 56/223 (25%), Positives = 98/223 (43%), Gaps = 17/223 (7%)

Query: 319 RFKYAELASVTKG-FGEQNLVGSGGFGRVYRGLMPSLGLEVAIK-----RIGHNSQQGMK 372
           ++K+ E   + +  F +  ++G GGFG V+   M + G   A K     R+         
Sbjct: 173 QWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGA 232

Query: 373 EFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWD 432
             + E   + ++  R +V L      + +L LV   +  G +   +++ D         +
Sbjct: 233 --MVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQ--E 288

Query: 433 QRYKILIG-IAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANP 491
            R       I   L +LH+   + +++RD+KP N+LLD   N ++ D GLA   E  A  
Sbjct: 289 PRAIFYTAQIVSGLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLAV--ELKAGQ 343

Query: 492 QTTH-IVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGR 533
             T    GT G++APEL    +   S D ++ G+ + E+   R
Sbjct: 344 TKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 96.6 bits (241), Expect = 1e-21
 Identities = 59/209 (28%), Positives = 92/209 (44%), Gaps = 26/209 (12%)

Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMS----MGRLRHRNLVQL 392
            +G G FG+V            A+K +         E V  +      M  L H  LV L
Sbjct: 22  AIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNE-VRNVFKELQIMQGLEHPFLVNL 80

Query: 393 HGWCRKQDE--LLLVYDYVPNGSLDKLLFDKDHKLRKLLTWD-QRYKILIG-IAQSLLYL 448
             W   QDE  + +V D +  G L        + L++ + +  +  K+ I  +  +L YL
Sbjct: 81  --WYSFQDEEDMFMVVDLLLGGDL----R---YHLQQNVHFKEETVKLFICELVMALDYL 131

Query: 449 HEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPE-L 507
                QR++HRD+KP NILLD + +  + DF +A +        T  + GT  Y+APE  
Sbjct: 132 QN---QRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITT--MAGTKPYMAPEMF 186

Query: 508 TRTGKA--TTSTDVYSYGILMLEVACGRR 534
           +    A  + + D +S G+   E+  GRR
Sbjct: 187 SSRKGAGYSFAVDWWSLGVTAYELLRGRR 215

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 98.3 bits (245), Expect = 1e-21
 Identities = 63/221 (28%), Positives = 100/221 (45%), Gaps = 18/221 (8%)

Query: 320 FKYAELASVTKG-FGEQNLVGSGGFGRVYRGLMPSLGLEVAIK-----RIGHNSQQGMKE 373
           +K+ E   VTK  F +  ++G GGFG V    + + G   A K     RI     + M  
Sbjct: 173 WKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMA- 231

Query: 374 FVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQ 433
            + E   + ++  R +V L      +D L LV   +  G L        + + +    + 
Sbjct: 232 -LNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDL----KFHIYHMGQAGFPEA 286

Query: 434 RYKILIG-IAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQ 492
           R       I   L  LH    +R+V+RD+KP NILLD + + ++ D GLA          
Sbjct: 287 RAVFYAAEICCGLEDLHR---ERIVYRDLKPENILLDDHGHIRISDLGLAV--HVPEGQT 341

Query: 493 TTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGR 533
               VGT+GY+APE+ +  + T S D ++ G L+ E+  G+
Sbjct: 342 IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ 382

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score = 95.0 bits (237), Expect = 2e-21
 Identities = 60/218 (27%), Positives = 98/218 (44%), Gaps = 38/218 (17%)

Query: 336 NLVGSGGFGRVYRGL-MPSLGLEVAIKRIG-HNSQQGM-----KEFVAEIMSMGRLRHRN 388
             +G G +G+V++   + + G  VA+KR+     ++GM     +E VA +  +    H N
Sbjct: 17  AEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIRE-VAVLRHLETFEHPN 75

Query: 389 LVQLH-----GWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQ 443
           +V+L          ++ +L LV+++V            D  L   L       +     +
Sbjct: 76  VVRLFDVCTVSRTDRETKLTLVFEHV------------DQDLTTYLDKVPEPGVPTETIK 123

Query: 444 SLL--------YLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTH 495
            ++        +LH     RVVHRD+KP NIL+ +    KL DFGLA+IY        T 
Sbjct: 124 DMMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLARIY--SFQMALTS 178

Query: 496 IVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGR 533
           +V TL Y APE+       T  D++S G +  E+   +
Sbjct: 179 VVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 98.0 bits (244), Expect = 2e-21
 Identities = 53/213 (24%), Positives = 92/213 (43%), Gaps = 26/213 (12%)

Query: 332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIK-----RIGHNSQQGM----KEFVAEIMSMG 382
           F    ++G GGFG VY       G   A+K     RI     + +    +  ++ + +  
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG- 249

Query: 383 RLRHRNLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIG-I 441
                 +V +       D+L  + D +  G L   L     +       +   +     I
Sbjct: 250 --DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL----SQHGVFS--EADMRFYAAEI 301

Query: 442 AQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLG 501
              L ++H    + VV+RD+KP+NILLD + + ++ D GLA  +      +    VGT G
Sbjct: 302 ILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK---KPHASVGTHG 355

Query: 502 YLAPELTRTGKA-TTSTDVYSYGILMLEVACGR 533
           Y+APE+ + G A  +S D +S G ++ ++  G 
Sbjct: 356 YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGH 388

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score = 95.2 bits (237), Expect = 5e-21
 Identities = 58/251 (23%), Positives = 89/251 (35%), Gaps = 36/251 (14%)

Query: 298 LQRIKYADKMLEDWEIQCGARRFKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLE 357
           L++ K  D  L  ++      R    +       +    ++G G FG V      S    
Sbjct: 41  LRKNKNIDNFLSRYKDTINKIRDLRMKAED----YEVVKVIGRGAFGEVQLVRHKSTRKV 96

Query: 358 VAIKRIGHNSQQGMKE---FVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSL 414
            A+K +         +   F  E   M       +VQL    +    L +V +Y+P G L
Sbjct: 97  YAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDL 156

Query: 415 DKLLFDKDHKLRKLLTWDQRYKILIGIAQ--------SLLYLHEECNQRVVHRDVKPSNI 466
             L+                Y +    A+        +L  +H       +HRDVKP N+
Sbjct: 157 VNLM--------------SNYDVPEKWARFYTAEVVLALDAIHS---MGFIHRDVKPDNM 199

Query: 467 LLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPE-LTRTGKA---TTSTDVYSY 522
           LLD   + KL DFG           +    VGT  Y++PE L   G         D +S 
Sbjct: 200 LLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSV 259

Query: 523 GILMLEVACGR 533
           G+ + E+  G 
Sbjct: 260 GVFLYEMLVGD 270

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score = 94.8 bits (236), Expect = 8e-21
 Identities = 51/206 (24%), Positives = 85/206 (41%), Gaps = 17/206 (8%)

Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKE---FVAEIMSMGRLRHRNLVQLH 393
           ++G G FG V    + +     A+K +         E   F  E   +     + +  LH
Sbjct: 81  VIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLH 140

Query: 394 GWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIG-IAQSLLYLHEEC 452
              +  + L LV DY   G L  LL   + +L      ++  +  +  +  ++  +H   
Sbjct: 141 YAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLP-----EEMARFYLAEMVIAIDSVH--- 192

Query: 453 NQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL----- 507
               VHRD+KP NIL+D   + +L DFG           Q++  VGT  Y++PE+     
Sbjct: 193 QLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAME 252

Query: 508 TRTGKATTSTDVYSYGILMLEVACGR 533
              G+     D +S G+ M E+  G 
Sbjct: 253 GGKGRYGPECDWWSLGVCMYEMLYGE 278

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score = 92.4 bits (230), Expect = 2e-20
 Identities = 49/207 (23%), Positives = 90/207 (43%), Gaps = 19/207 (9%)

Query: 332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMS----MGRLRHR 387
           F     +G+G FGRV        G   A+K +       +K+ +   ++    +  +   
Sbjct: 43  FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQ-IEHTLNEKRILQAVNFP 101

Query: 388 NLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIG-IAQSLL 446
            LV+L    +    L +V +YV  G +   L     ++ +    +   +     I  +  
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL----RRIGRFS--EPHARFYAAQIVLTFE 155

Query: 447 YLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPE 506
           YLH      +++RD+KP N+L+D     ++ DFG AK  +     +T  + GT   LAPE
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWTLCGTPEALAPE 208

Query: 507 LTRTGKATTSTDVYSYGILMLEVACGR 533
           +  +     + D ++ G+L+ E+A G 
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGY 235

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score = 92.5 bits (230), Expect = 3e-20
 Identities = 55/210 (26%), Positives = 82/210 (39%), Gaps = 23/210 (10%)

Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKE---FVAEIMSMGRLRHRNLVQLH 393
           ++G G F  V    M   G   A+K +         E   F  E   +     R + QLH
Sbjct: 68  VIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLH 127

Query: 394 GWCRKQDE--LLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIG-IAQSLLYLHE 450
                QDE  L LV +Y   G L  LL     ++       +  +  +  I  ++  +H 
Sbjct: 128 --FAFQDENYLYLVMEYYVGGDLLTLLSKFGERIP-----AEMARFYLAEIVMAIDSVHR 180

Query: 451 ECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRT 510
                 VHRD+KP NILLD   + +L DFG           ++   VGT  YL+PE+ + 
Sbjct: 181 ---LGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQA 237

Query: 511 GKATTSTDVY-------SYGILMLEVACGR 533
                 T  Y       + G+   E+  G+
Sbjct: 238 VGGGPGTGSYGPECDWWALGVFAYEMFYGQ 267

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score = 92.6 bits (230), Expect = 4e-20
 Identities = 52/214 (24%), Positives = 94/214 (43%), Gaps = 21/214 (9%)

Query: 328 VTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGH--NSQQGMKEFVAEIMSMGRLR 385
           V K +     +GSG  G V       L   VAIK++     +Q   K    E++ M  + 
Sbjct: 60  VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN 119

Query: 386 HRNLVQLH------GWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILI 439
           H+N++ L           +  ++ LV + +          +    ++  L  ++   +L 
Sbjct: 120 HKNIISLLNVFTPQKTLEEFQDVYLVMELMDA--------NLCQVIQMELDHERMSYLLY 171

Query: 440 GIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGT 499
            +   + +LH   +  ++HRD+KPSNI++ +    K+ DFGLA+    G +   T  V T
Sbjct: 172 QMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVT 226

Query: 500 LGYLAPELTRTGKATTSTDVYSYGILMLEVACGR 533
             Y APE+        + D++S G +M E+   +
Sbjct: 227 RYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 260

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score = 90.0 bits (224), Expect = 1e-19
 Identities = 57/221 (25%), Positives = 96/221 (43%), Gaps = 36/221 (16%)

Query: 328 VTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGH--NSQQGMKEFVAEIMSMGRLR 385
           + K +     VGSG +G V   +    G +VAIK++     S+   K    E++ +  ++
Sbjct: 22  LPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQ 81

Query: 386 HRNLVQLH------GWCRKQDELLLVYDYVPNGSLDKLLFDKD-HK-LRKLLTWDQR--- 434
           H N++ L          R   +  LV                D  K +    + ++    
Sbjct: 82  HENVIGLLDVFTPASSLRNFYDFYLVMP----------FMQTDLQKIMGLKFSEEKIQYL 131

Query: 435 -YKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQT 493
            Y++L G    L Y+H   +  VVHRD+KP N+ ++     K+ DFGLA+     A+ + 
Sbjct: 132 VYQMLKG----LKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLAR----HADAEM 180

Query: 494 THIVGTLGYLAPE-LTRTGKATTSTDVYSYGILMLEVACGR 533
           T  V T  Y APE +        + D++S G +M E+  G+
Sbjct: 181 TGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score = 89.6 bits (223), Expect = 1e-19
 Identities = 47/204 (23%), Positives = 85/204 (41%), Gaps = 25/204 (12%)

Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLR-HRNLVQLHGWC 396
           +G G +  V+  +  +   +V +K +        K+   EI  +  LR   N++ L    
Sbjct: 44  LGRGKYSEVFEAINITNNEKVVVKIL---KPVKKKKIKREIKILENLRGGPNIITLADIV 100

Query: 397 RKQDE--LLLVYDYVPNGSLDKLL--FDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEEC 452
           +        LV+++V N    +L         +R  +     Y+IL      L Y H   
Sbjct: 101 KDPVSRTPALVFEHVNNTDFKQLYQTLTDYD-IRFYM-----YEILKA----LDYCHS-- 148

Query: 453 NQRVVHRDVKPSNILLDTYLNA-KLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTG 511
              ++HRDVKP N+++D      +L D+GLA+ Y  G   +    V +  +  PEL    
Sbjct: 149 -MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG--QEYNVRVASRYFKGPELLVDY 205

Query: 512 KA-TTSTDVYSYGILMLEVACGRR 534
           +    S D++S G ++  +   + 
Sbjct: 206 QMYDYSLDMWSLGCMLASMIFRKE 229

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score = 88.6 bits (220), Expect = 4e-19
 Identities = 55/220 (25%), Positives = 97/220 (44%), Gaps = 33/220 (15%)

Query: 328 VTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGH--NSQQGMKEFVAEIMSMGRLR 385
           V K +     +GSG  G V       L   VAIK++     +Q   K    E++ M  + 
Sbjct: 23  VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN 82

Query: 386 HRNLVQLH------GWCRKQDELLLVYDYVPNGSLDKLLFDKD-HK-LRKLLTWDQR--- 434
           H+N++ L           +  ++ +V +          L D +  + ++  L  ++    
Sbjct: 83  HKNIIGLLNVFTPQKSLEEFQDVYIVME----------LMDANLCQVIQMELDHERMSYL 132

Query: 435 -YKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQT 493
            Y++L G    + +LH   +  ++HRD+KPSNI++ +    K+ DFGLA+      +   
Sbjct: 133 LYQMLCG----IKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG--TSFMM 183

Query: 494 THIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGR 533
           T  V T  Y APE+        + D++S G +M E+  G 
Sbjct: 184 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGG 223

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score = 86.8 bits (216), Expect = 9e-19
 Identities = 58/204 (28%), Positives = 95/204 (46%), Gaps = 23/204 (11%)

Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMS----MGRLRHRNLVQL 392
            +G+G FGRV+       G   A+K +       +K+ V         +  + H  ++++
Sbjct: 13  TLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQ-VEHTNDERLMLSIVTHPFIIRM 71

Query: 393 HGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWD-QRYKILIG-IAQSLLYLHE 450
            G  +   ++ ++ DY+  G L    F     LRK   +     K     +  +L YLH 
Sbjct: 72  WGTFQDAQQIFMIMDYIEGGEL----F---SLLRKSQRFPNPVAKFYAAEVCLALEYLHS 124

Query: 451 ECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTH-IVGTLGYLAPELTR 509
              + +++RD+KP NILLD   + K+ DFG AK       P  T+ + GT  Y+APE+  
Sbjct: 125 ---KDIIYRDLKPENILLDKNGHIKITDFGFAKY-----VPDVTYTLCGTPDYIAPEVVS 176

Query: 510 TGKATTSTDVYSYGILMLEVACGR 533
           T     S D +S+GIL+ E+  G 
Sbjct: 177 TKPYNKSIDWWSFGILIYEMLAGY 200

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score = 85.4 bits (212), Expect = 4e-18
 Identities = 66/222 (29%), Positives = 104/222 (46%), Gaps = 33/222 (14%)

Query: 328 VTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIG-HNSQQGMKEFVAEIMSMGRLRH 386
           V   +   + +G G +G V         + VAIK+I     Q   +  + EI  + R RH
Sbjct: 25  VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRH 84

Query: 387 RNLVQLH-----GWCRKQDELLLVYDYVPNGSLDKLLFDKD-HKLRK--LLTWDQR---- 434
            N++ ++         +  ++ +V D          L + D +KL K   L+ D      
Sbjct: 85  ENIIGINDIIRAPTIEQMKDVYIVQD----------LMETDLYKLLKTQHLSNDHICYFL 134

Query: 435 YKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIY--EHGANPQ 492
           Y+IL G    L Y+H   +  V+HRD+KPSN+LL+T  + K+ DFGLA++   +H     
Sbjct: 135 YQILRG----LKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 187

Query: 493 TTHIVGTLGYLAPELTRTGKA-TTSTDVYSYGILMLEVACGR 533
            T  V T  Y APE+    K  T S D++S G ++ E+   R
Sbjct: 188 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 85.9 bits (213), Expect = 6e-18
 Identities = 64/203 (31%), Positives = 88/203 (43%), Gaps = 17/203 (8%)

Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMS----MGRLRHRNLVQL 392
           L+G G FG+V      + G   A+K +         E VA  ++    +   RH  L  L
Sbjct: 155 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDE-VAHTLTENRVLQNSRHPFLTAL 213

Query: 393 HGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQR-YKILIGIAQSLLYLHEE 451
               +  D L  V +Y   G L    F    + R       R Y   I  A  L YLH E
Sbjct: 214 KYSFQTHDRLCFVMEYANGGEL----FFHLSRERVFSEDRARFYGAEIVSA--LDYLHSE 267

Query: 452 CNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTH-IVGTLGYLAPELTRT 510
            N  VV+RD+K  N++LD   + K+ DFGL K  E   +  T     GT  YLAPE+   
Sbjct: 268 KN--VVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKTFCGTPEYLAPEVLED 323

Query: 511 GKATTSTDVYSYGILMLEVACGR 533
                + D +  G++M E+ CGR
Sbjct: 324 NDYGRAVDWWGLGVVMYEMMCGR 346

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score = 84.2 bits (209), Expect = 7e-18
 Identities = 58/228 (25%), Positives = 105/228 (46%), Gaps = 36/228 (15%)

Query: 328 VTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHR 387
           +   + +   +G GG G V+  +       VAIK+I     Q +K  + EI  + RL H 
Sbjct: 9   LGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHD 68

Query: 388 NLVQLH--------------GWCRKQDELLLVYDYVPNGSLDKLL----FDKDHKLRKLL 429
           N+V++               G   + + + +V +Y+    L  +L      ++H   +L 
Sbjct: 69  NIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMET-DLANVLEQGPLLEEHA--RLF 125

Query: 430 TWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTY-LNAKLGDFGLAKIY--E 486
                Y++L G    L Y+H   +  V+HRD+KP+N+ ++T  L  K+GDFGLA+I    
Sbjct: 126 M----YQLLRG----LKYIH---SANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPH 174

Query: 487 HGANPQTTHIVGTLGYLAPELTRTGKA-TTSTDVYSYGILMLEVACGR 533
           +      +  + T  Y +P L  +    T + D+++ G +  E+  G+
Sbjct: 175 YSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGK 222

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score = 84.3 bits (209), Expect = 1e-17
 Identities = 59/222 (26%), Positives = 96/222 (43%), Gaps = 37/222 (16%)

Query: 328 VTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGH--NSQQGMKEFVAEIMSMGRLR 385
           V   + +   VGSG +G V   +    G +VAIK++     S+   K    E+  +  +R
Sbjct: 23  VRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMR 82

Query: 386 HRNLVQLH------GWCRKQDELLLVYDYVPNGSLDKLLFDKD-HKL--RKLLTWDQR-- 434
           H N++ L              +  LV                D  KL   + L  D+   
Sbjct: 83  HENVIGLLDVFTPDETLDDFTDFYLVMP----------FMGTDLGKLMKHEKLGEDRIQF 132

Query: 435 --YKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQ 492
             Y++L G    L Y+H      ++HRD+KP N+ ++     K+ DFGLA+     A+ +
Sbjct: 133 LVYQMLKG----LRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLAR----QADSE 181

Query: 493 TTHIVGTLGYLAPE-LTRTGKATTSTDVYSYGILMLEVACGR 533
            T  V T  Y APE +    + T + D++S G +M E+  G+
Sbjct: 182 MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score = 83.5 bits (207), Expect = 2e-17
 Identities = 59/227 (25%), Positives = 93/227 (40%), Gaps = 36/227 (15%)

Query: 328 VTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVA----------- 376
           +   +  Q  + SG +G V  G+    G+ VAIKR+ +    G    +            
Sbjct: 20  MQSPYTVQRFISSGSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLR 78

Query: 377 EIMSMGRLRHRNLVQLH-----GWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTW 431
           EI  +    H N++ L             +L LV + +    L +++    H  R +++ 
Sbjct: 79  EIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRT-DLAQVI----HDQRIVISP 133

Query: 432 DQR----YKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEH 487
                  Y IL+G    L  LH      VVHRD+ P NILL    +  + DF LA+    
Sbjct: 134 QHIQYFMYHILLG----LHVLH---EAGVVHRDLHPGNILLADNNDITICDFNLAREDT- 185

Query: 488 GANPQTTHIVGTLGYLAPE-LTRTGKATTSTDVYSYGILMLEVACGR 533
            A+   TH V    Y APE + +    T   D++S G +M E+   +
Sbjct: 186 -ADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRK 231

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score = 83.5 bits (207), Expect = 2e-17
 Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 31/219 (14%)

Query: 328 VTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGM--KEFVAEIMSMGRLR 385
           V + +   + VGSG +G V        GL VA+K++    Q  +  K    E+  +  ++
Sbjct: 27  VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK 86

Query: 386 HRNLVQLH------GWCRKQDELLLVYDYVPNGSLDKLL----FDKDHKLRKLLTWDQRY 435
           H N++ L           + +++ LV   +    L+ ++       DH  + L+     Y
Sbjct: 87  HENVIGLLDVFTPARSLEEFNDVYLVTHLMGA-DLNNIVKCQKLTDDHV-QFLI-----Y 139

Query: 436 KILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTH 495
           +IL G    L Y+H   +  ++HRD+KPSN+ ++     K+ DFGLA+        + T 
Sbjct: 140 QILRG----LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTADEMTG 188

Query: 496 IVGTLGYLAPE-LTRTGKATTSTDVYSYGILMLEVACGR 533
            V T  Y APE +        + D++S G +M E+  GR
Sbjct: 189 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score = 83.2 bits (206), Expect = 3e-17
 Identities = 52/251 (20%), Positives = 95/251 (37%), Gaps = 59/251 (23%)

Query: 327 SVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRH 386
           + +K +     +G+G FG V        G   A+K++     Q  +    E+  M  L H
Sbjct: 4   TSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKV----LQDPRYKNRELDIMKVLDH 59

Query: 387 RNLVQL------------------------------------HGWCRKQDE--LLLVYDY 408
            N+++L                                               L ++ +Y
Sbjct: 60  VNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEY 119

Query: 409 VPNGSLDKLLFDKDHKLRKLLTWDQ----RYKILIGIAQSLLYLHEECNQRVVHRDVKPS 464
           VP+ +L K+L     +  + +  +      Y++   +     ++H   +  + HRD+KP 
Sbjct: 120 VPD-TLHKVL-KSFIRSGRSIPMNLISIYIYQLFRAVG----FIH---SLGICHRDIKPQ 170

Query: 465 NILLDTYLNA-KLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKA-TTSTDVYSY 522
           N+L+++  N  KL DFG AK         +   + +  Y APEL       T S D++S 
Sbjct: 171 NLLVNSKDNTLKLCDFGSAKKLIPS--EPSVAYICSRFYRAPELMLGATEYTPSIDLWSI 228

Query: 523 GILMLEVACGR 533
           G +  E+  G+
Sbjct: 229 GCVFGELILGK 239

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score = 79.9 bits (198), Expect = 2e-16
 Identities = 53/211 (25%), Positives = 98/211 (46%), Gaps = 30/211 (14%)

Query: 337 LVGSGGFGRVY---RGLMPSLGLEVAIK-----RIGHNSQQGMKEFVAEIMS----MGRL 384
           ++G GG+G+V+   +    + G   A+K      I  N++       A   +    +  +
Sbjct: 24  VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKD-----TAHTKAERNILEEV 78

Query: 385 RHRNLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIG-IAQ 443
           +H  +V L    +   +L L+ +Y+  G L    F +  +    +  +      +  I+ 
Sbjct: 79  KHPFIVDLIYAFQTGGKLYLILEYLSGGEL----FMQLEREGIFM--EDTACFYLAEISM 132

Query: 444 SLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTH-IVGTLGY 502
           +L +LH+   + +++RD+KP NI+L+   + KL DFGL K  E   +   TH   GT+ Y
Sbjct: 133 ALGHLHQ---KGIIYRDLKPENIMLNHQGHVKLTDFGLCK--ESIHDGTVTHTFCGTIEY 187

Query: 503 LAPELTRTGKATTSTDVYSYGILMLEVACGR 533
           +APE+        + D +S G LM ++  G 
Sbjct: 188 MAPEILMRSGHNRAVDWWSLGALMYDMLTGA 218

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score = 79.5 bits (197), Expect = 2e-16
 Identities = 59/214 (27%), Positives = 100/214 (46%), Gaps = 38/214 (17%)

Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQ--GMK-------------EFVAEIMSM 381
           ++G G FG+V+          +  K  G +++Q   MK                 E   +
Sbjct: 31  VLGQGSFGKVF----------LVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDIL 80

Query: 382 GRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIG- 440
             + H  +V+LH   + + +L L+ D++  G L    F +  K       ++  K  +  
Sbjct: 81  VEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDL----FTRLSKEVMFT--EEDVKFYLAE 134

Query: 441 IAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTH-IVGT 499
           +A +L +LH      +++RD+KP NILLD   + KL DFGL+K  E   + +  +   GT
Sbjct: 135 LALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKKAYSFCGT 189

Query: 500 LGYLAPELTRTGKATTSTDVYSYGILMLEVACGR 533
           + Y+APE+      T S D +S+G+LM E+  G 
Sbjct: 190 VEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGT 223

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 79.3 bits (196), Expect = 2e-16
 Identities = 38/154 (24%), Positives = 65/154 (42%), Gaps = 21/154 (13%)

Query: 339 GSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRL-RHRNLVQLHGWC- 396
           G G  G+V +        + A+K +        +    E+    R  +  ++V++     
Sbjct: 27  GLGINGKVLQIFNKRTQEKFALKML--QDCPKARR---EVELHWRASQCPHIVRIVDVYE 81

Query: 397 ---RKQDELLLVYDYVPNGSLDKLLFDK-DHKLRKLLTWDQRYKILIGIAQSLLYLHEEC 452
                +  LL+V + +  G L    F +   +  +  T  +  +I+  I +++ YLH   
Sbjct: 82  NLYAGRKCLLIVMECLDGGEL----FSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS-- 135

Query: 453 NQRVVHRDVKPSNILL-DTYLNA--KLGDFGLAK 483
              + HRDVKP N+L      NA  KL DFG AK
Sbjct: 136 -INIAHRDVKPENLLYTSKRPNAILKLTDFGFAK 168

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score = 80.0 bits (198), Expect = 3e-16
 Identities = 56/219 (25%), Positives = 100/219 (45%), Gaps = 42/219 (19%)

Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQ--GMK-----------EFVAEIMS--- 380
           ++G+G +G+V+          +  K  GH++ +   MK           +      +   
Sbjct: 61  VLGTGAYGKVF----------LVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQ 110

Query: 381 -MGRLRHRN-LVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWD-QRYKI 437
            +  +R    LV LH   + + +L L+ DY+  G L    F     L +   +     +I
Sbjct: 111 VLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGEL----F---THLSQRERFTEHEVQI 163

Query: 438 LIG-IAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHI 496
            +G I  +L +LH+     +++RD+K  NILLD+  +  L DFGL+K +      +    
Sbjct: 164 YVGEIVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDF 220

Query: 497 VGTLGYLAPELTRTGKA--TTSTDVYSYGILMLEVACGR 533
            GT+ Y+AP++ R G +    + D +S G+LM E+  G 
Sbjct: 221 CGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGA 259

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 81.6 bits (201), Expect = 3e-16
 Identities = 41/151 (27%), Positives = 71/151 (47%), Gaps = 13/151 (8%)

Query: 385 RHRNLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIG-IAQ 443
           +   L QLH   +  D L  V +YV  G L         ++ +    +         IA 
Sbjct: 400 KPPFLTQLHSCFQTMDRLYFVMEYVNGGDL----MYHIQQVGRFK--EPHAVFYAAEIAI 453

Query: 444 SLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTH-IVGTLGY 502
            L +L     + +++RD+K  N++LD+  + K+ DFG+ K  E+  +  TT    GT  Y
Sbjct: 454 GLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCK--ENIWDGVTTKTFCGTPDY 508

Query: 503 LAPELTRTGKATTSTDVYSYGILMLEVACGR 533
           +APE+        S D +++G+L+ E+  G+
Sbjct: 509 IAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 539

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score = 80.3 bits (198), Expect = 4e-16
 Identities = 60/245 (24%), Positives = 92/245 (37%), Gaps = 66/245 (26%)

Query: 328 VTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVA-----EIMSMG 382
           +   +  ++L+G+G +G V           VAIK+I    +             EI  + 
Sbjct: 51  IPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFE---DLIDCKRILREIAILN 107

Query: 383 RLRHRNLVQLH-----GWCRKQDELLLVYDYVPNGSLDKLLFDKD-HKL---RKLLTWDQ 433
           RL H ++V++          K DEL +V +            D D  KL      LT   
Sbjct: 108 RLNHDHVVKVLDIVIPKDVEKFDELYVVLEIA----------DSDFKKLFRTPVYLTELH 157

Query: 434 R----YKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLA------- 482
                Y +L+G    + Y+H      ++HRD+KP+N L++   + K+ DFGLA       
Sbjct: 158 IKTLLYNLLVG----VKYVHS---AGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPE 210

Query: 483 -------------------KIYEHGANPQTTHIVGTLGYLAPELTRTGKA-TTSTDVYSY 522
                                +      Q T  V T  Y APEL    +  T + DV+S 
Sbjct: 211 NGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSI 270

Query: 523 G-ILM 526
           G I  
Sbjct: 271 GCIFA 275

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score = 78.8 bits (195), Expect = 5e-16
 Identities = 45/147 (30%), Positives = 72/147 (48%), Gaps = 13/147 (8%)

Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIG-IAQSLLY 447
           L QL    +  D L  V ++V  G L         K R+    + R +     I  +L++
Sbjct: 86  LTQLFCCFQTPDRLFFVMEFVNGGDL----MFHIQKSRRFD--EARARFYAAEIISALMF 139

Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTH-IVGTLGYLAPE 506
           LH+   + +++RD+K  N+LLD   + KL DFG+ K  E   N  TT    GT  Y+APE
Sbjct: 140 LHD---KGIIYRDLKLDNVLLDHEGHCKLADFGMCK--EGICNGVTTATFCGTPDYIAPE 194

Query: 507 LTRTGKATTSTDVYSYGILMLEVACGR 533
           + +      + D ++ G+L+ E+ CG 
Sbjct: 195 ILQEMLYGPAVDWWAMGVLLYEMLCGH 221

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 78.0 bits (193), Expect = 8e-16
 Identities = 60/208 (28%), Positives = 90/208 (43%), Gaps = 28/208 (13%)

Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIK-----RIGHNSQQGMKEFVAEIMS----MGRLRHR 387
           L+G G FG+V      + G   A+K      I    +      VA  ++    +   RH 
Sbjct: 12  LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDE------VAHTVTESRVLQNTRHP 65

Query: 388 NLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIG-IAQSLL 446
            L  L    +  D L  V +Y   G L    F    + R     ++R +     I  +L 
Sbjct: 66  FLTALKYAFQTHDRLCFVMEYANGGEL----FFHLSRERVFT--EERARFYGAEIVSALE 119

Query: 447 YLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTH-IVGTLGYLAP 505
           YLH    + VV+RD+K  N++LD   + K+ DFGL K  E  ++  T     GT  YLAP
Sbjct: 120 YLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTFCGTPEYLAP 174

Query: 506 ELTRTGKATTSTDVYSYGILMLEVACGR 533
           E+        + D +  G++M E+ CGR
Sbjct: 175 EVLEDNDYGRAVDWWGLGVVMYEMMCGR 202

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score = 78.0 bits (193), Expect = 8e-16
 Identities = 49/147 (33%), Positives = 74/147 (50%), Gaps = 13/147 (8%)

Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIG-IAQSLLY 447
           LV LH   + +  L  V +YV  G L         + RKL   ++  +     I+ +L Y
Sbjct: 72  LVGLHSCFQTESRLFFVIEYVNGGDL----MFHMQRQRKLP--EEHARFYSAEISLALNY 125

Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTH-IVGTLGYLAPE 506
           LHE   + +++RD+K  N+LLD+  + KL D+G+ K  E      TT    GT  Y+APE
Sbjct: 126 LHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSTFCGTPNYIAPE 180

Query: 507 LTRTGKATTSTDVYSYGILMLEVACGR 533
           + R      S D ++ G+LM E+  GR
Sbjct: 181 ILRGEDYGFSVDWWALGVLMFEMMAGR 207

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score = 78.0 bits (193), Expect = 1e-15
 Identities = 42/147 (28%), Positives = 66/147 (44%), Gaps = 13/147 (8%)

Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIG-IAQSLLY 447
           L  +    + ++ L  V +Y+  G L            K      R       I   L +
Sbjct: 80  LTHMFCTFQTKENLFFVMEYLNGGDL----MYHIQSCHKFD--LSRATFYAAEIILGLQF 133

Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTH-IVGTLGYLAPE 506
           LH    + +V+RD+K  NILLD   + K+ DFG+ K  E+      T+   GT  Y+APE
Sbjct: 134 LHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCK--ENMLGDAKTNTFCGTPDYIAPE 188

Query: 507 LTRTGKATTSTDVYSYGILMLEVACGR 533
           +    K   S D +S+G+L+ E+  G+
Sbjct: 189 ILLGQKYNHSVDWWSFGVLLYEMLIGQ 215

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score = 78.2 bits (193), Expect = 1e-15
 Identities = 49/147 (33%), Positives = 74/147 (50%), Gaps = 13/147 (8%)

Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIG-IAQSLLY 447
           LV LH   + +  L  V +YV  G L         + RKL   ++  +     I+ +L Y
Sbjct: 115 LVGLHSCFQTESRLFFVIEYVNGGDL----MFHMQRQRKLP--EEHARFYSAEISLALNY 168

Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTH-IVGTLGYLAPE 506
           LHE   + +++RD+K  N+LLD+  + KL D+G+ K  E      TT    GT  Y+APE
Sbjct: 169 LHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSTFCGTPNYIAPE 223

Query: 507 LTRTGKATTSTDVYSYGILMLEVACGR 533
           + R      S D ++ G+LM E+  GR
Sbjct: 224 ILRGEDYGFSVDWWALGVLMFEMMAGR 250

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score = 77.7 bits (192), Expect = 1e-15
 Identities = 56/229 (24%), Positives = 99/229 (43%), Gaps = 40/229 (17%)

Query: 328 VTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIG-HNSQQGMKEFVAEIMSMGRLRH 386
           ++  F  ++L+G G +G V        G  VAIK+I   +        + EI  +   +H
Sbjct: 9   ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKH 68

Query: 387 RNLVQLH-----GWCRKQDELLLVYDYVPNGSLDKLLFDKD-HKL--RKLLTWDQR---- 434
            N++ +            +E+ ++ +          L   D H++   ++L+ D      
Sbjct: 69  ENIITIFNIQRPDSFENFNEVYIIQE----------LMQTDLHRVISTQMLSDDHIQYFI 118

Query: 435 YKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE-------- 486
           Y+ L      +  LH      V+HRD+KPSN+L+++  + K+ DFGLA+I +        
Sbjct: 119 YQTLRA----VKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSE 171

Query: 487 -HGANPQTTHIVGTLGYLAPELTRTGKA-TTSTDVYSYGILMLEVACGR 533
             G        V T  Y APE+  T    + + DV+S G ++ E+   R
Sbjct: 172 PTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score = 77.3 bits (191), Expect = 2e-15
 Identities = 41/147 (27%), Positives = 70/147 (47%), Gaps = 13/147 (8%)

Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIG-IAQSLLY 447
           L QLH   +  D L  V +YV  G L         ++ +    +         IA  L +
Sbjct: 83  LTQLHSCFQTMDRLYFVMEYVNGGDL----MYHIQQVGRFK--EPHAVFYAAEIAIGLFF 136

Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTH-IVGTLGYLAPE 506
           L     + +++RD+K  N++LD+  + K+ DFG+ K  E+  +  TT    GT  Y+APE
Sbjct: 137 LQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCK--ENIWDGVTTKTFCGTPDYIAPE 191

Query: 507 LTRTGKATTSTDVYSYGILMLEVACGR 533
           +        S D +++G+L+ E+  G+
Sbjct: 192 IIAYQPYGKSVDWWAFGVLLYEMLAGQ 218

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score = 77.3 bits (191), Expect = 2e-15
 Identities = 51/147 (34%), Positives = 71/147 (48%), Gaps = 13/147 (8%)

Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIG-IAQSLLY 447
           LV LH   +  D+L  V DY+  G L    F    + R  L  + R +     IA +L Y
Sbjct: 101 LVGLHFSFQTADKLYFVLDYINGGEL----FYHLQRERCFL--EPRARFYAAEIASALGY 154

Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTH-IVGTLGYLAPE 506
           LH      +V+RD+KP NILLD+  +  L DFGL K  E+  +  TT    GT  YLAPE
Sbjct: 155 LHS---LNIVYRDLKPENILLDSQGHIVLTDFGLCK--ENIEHNSTTSTFCGTPEYLAPE 209

Query: 507 LTRTGKATTSTDVYSYGILMLEVACGR 533
           +        + D +  G ++ E+  G 
Sbjct: 210 VLHKQPYDRTVDWWCLGAVLYEMLYGL 236

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score = 72.9 bits (179), Expect = 1e-13
 Identities = 64/256 (25%), Positives = 102/256 (39%), Gaps = 54/256 (21%)

Query: 328 VTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGM--KEFVAEIMSMGRLR 385
           V   +  ++L+G G +G VY     +    VAIK++    +  +  K  + EI  + RL+
Sbjct: 24  VPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLK 83

Query: 386 HRNLVQLH-----GWCRKQDELLLVYDYVPNGSLDKLLFDKD-HKL---RKLLTWDQR-- 434
              +++L+         K DEL +V +            D D  KL      LT +    
Sbjct: 84  SDYIIRLYDLIIPDDLLKFDELYIVLEIA----------DSDLKKLFKTPIFLTEEHIKT 133

Query: 435 --YKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLA---------- 482
             Y +L+G      ++HE     ++HRD+KP+N LL+   + K+ DFGLA          
Sbjct: 134 ILYNLLLG----ENFIHE-SG--IIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTN 186

Query: 483 -----------KIYEHGANPQTTHIVGTLGYLAPELTRTGKA-TTSTDVYSYGILMLEVA 530
                        +      Q T  V T  Y APEL    +  T S D++S G +  E+ 
Sbjct: 187 IVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELL 246

Query: 531 CGRRSIEPQKAAAELL 546
              +S          L
Sbjct: 247 NMLQSHINDPTNRFPL 262

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336

 Score = 70.7 bits (172), Expect = 3e-13
 Identities = 42/201 (20%), Positives = 63/201 (31%), Gaps = 45/201 (22%)

Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRI--------GHNSQQGMKEFVAEIMSMGRL----- 384
           +G G FG V++ +       VAIK I          + Q+  +E + EI+    L     
Sbjct: 28  IGEGVFGEVFQTIAD--HTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSG 85

Query: 385 ----RHRNLVQLHGWCRKQD----ELLLVYDY----------VPNGSLDKLLF------- 419
               R    + L+     Q      LL  +D+           P+   D  LF       
Sbjct: 86  EVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEF 145

Query: 420 ---DKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKL 476
              D +    KL +      IL  +  SL            HRD+   N+LL      KL
Sbjct: 146 GGIDLEQMRTKLSSLATAKSILHQLTASLAVAEASLR--FEHRDLHWGNVLLKKTSLKKL 203

Query: 477 GDFGLAKIYEHGANPQTTHIV 497
                 K     +      I+
Sbjct: 204 HYTLNGKSSTIPSCGLQVSII 224

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 69.2 bits (169), Expect = 9e-13
 Identities = 49/259 (18%), Positives = 90/259 (34%), Gaps = 67/259 (25%)

Query: 339 GSGGFGRVYRGLMPSLG-----LEVAIKRI-GHNSQQGMKEFVAEIMSMGRL-RHRNLVQ 391
           G G FG+V       +        VA+K +    +    +  ++E+  +  +  H N+V 
Sbjct: 31  GRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 90

Query: 392 LHGWCRKQDE-LLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYK-------------- 436
           L G C K    L+++ ++   G+L   L  K ++     T   R++              
Sbjct: 91  LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLK 150

Query: 437 --------------ILIGIAQSLLYLHEECNQRVVHRDVKPSNILLD---------TYL- 472
                               +SL  + EE     +++D      L+           +L 
Sbjct: 151 RRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLA 210

Query: 473 --------------------NAKLGDFGLAK-IYEHGANPQTTHIVGTLGYLAPELTRTG 511
                                 K+ DFGLA+ IY+     +       L ++APE     
Sbjct: 211 SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDR 270

Query: 512 KATTSTDVYSYGILMLEVA 530
             T  +DV+S+G+L+ E+ 
Sbjct: 271 VYTIQSDVWSFGVLLWEIF 289

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score = 68.9 bits (169), Expect = 1e-12
 Identities = 60/239 (25%), Positives = 101/239 (42%), Gaps = 50/239 (20%)

Query: 328 VTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGM--KEFVAEIMSMGRLR 385
           V + +     +G G +G V++ +    G  VA+K+I    Q     +    EIM +  L 
Sbjct: 7   VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELS 66

Query: 386 -HRNLVQLHGWCRKQD--ELLLVYDYVPNGSLDKLLFDKD-HKLRK--LLTWDQR----Y 435
            H N+V L    R  +  ++ LV+D            + D H + +  +L    +    Y
Sbjct: 67  GHENIVNLLNVLRADNDRDVYLVFD----------YMETDLHAVIRANILEPVHKQYVVY 116

Query: 436 KILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIY---------- 485
           +++      + YLH      ++HRD+KPSNILL+   + K+ DFGL++ +          
Sbjct: 117 QLIKV----IKYLHS---GGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNI 169

Query: 486 ----------EHGANPQTTHIVGTLGYLAPELTRTGKA-TTSTDVYSYGILMLEVACGR 533
                          P  T  V T  Y APE+       T   D++S G ++ E+ CG+
Sbjct: 170 PLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 65.3 bits (158), Expect = 4e-11
 Identities = 80/504 (15%), Positives = 144/504 (28%), Gaps = 176/504 (34%)

Query: 261 TLEKRSHEVVQRRGFSVGITLAGMAFLILIIAGAIHVLQR---------IKYADKMLEDW 311
           TL  +  E+VQ+  F   +      FL       I   QR         I+  D++  D 
Sbjct: 70  TLLSKQEEMVQK--FVEEVLRINYKFL----MSPIKTEQRQPSMMTRMYIEQRDRLYNDN 123

Query: 312 EIQCG---ARRFKYAELASVTKGF-GEQNLV--GSGGFGRVYRGLMPSLGLEVAIKRIGH 365
           ++      +R   Y +L          +N++  G  G G+        + L+V       
Sbjct: 124 QVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGK------TWVALDVC------ 171

Query: 366 NSQQGMKEFVAEI--MSMGRLRHRNLVQLHGWCRKQDELL-----LVYDYVPNGS----- 413
            S +   +   +I  +++              C   + +L     L+Y   PN +     
Sbjct: 172 LSYKVQCKMDFKIFWLNLKN------------CNSPETVLEMLQKLLYQIDPNWTSRSDH 219

Query: 414 --------------LDKLLFDKDHKLRKLL----TWDQRY--------KILI-----GIA 442
                         L +LL  K ++   LL      + +         KIL+      + 
Sbjct: 220 SSNIKLRIHSIQAELRRLLKSKPYE-NCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVT 278

Query: 443 QSLLYLHEECNQRVVHRDVKPSNI---------LLDTYLNAKLGD----------FGLAK 483
             L            H  +   ++         LL  YL+ +  D            L+ 
Sbjct: 279 DFLS------AATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSI 332

Query: 484 I-------------YEHGANPQTTHIVG-TLGYLAPELTRTGKATTSTDVY-SYGILMLE 528
           I             ++H    + T I+  +L  L P   R         ++    +    
Sbjct: 333 IAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYR--------KMFDRLSVFPPS 384

Query: 529 VACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYYDLAE---AELVLNL-GL 584
                  I        LL + W     +       +   L  Y L E    E  +++  +
Sbjct: 385 A-----HIPTI-----LLSLIWFD---VIKSDVMVVVNKLHKYSLVEKQPKESTISIPSI 431

Query: 585 FCS-APNPVYRPDM-RRVVE-------FLLGDSSLPPLPPD------I--HLKDTRNIMG 627
           +            + R +V+       F   D  L P   D      I  HLK+  +   
Sbjct: 432 YLELKVKLENEYALHRSIVDHYNIPKTFDSDD--LIPPYLDQYFYSHIGHHLKNIEHPER 489

Query: 628 FSDFPN---DSDFFNSKLMSSQSN 648
            + F     D  F   K+    + 
Sbjct: 490 MTLFRMVFLDFRFLEQKIRHDSTA 513

>1gv9_A P58/ergic-53; lectin, carbohydrate binding; 1.46A {Rattus norvegicus} SCOP: b.29.1.13 PDB: 1r1z_A 3a4u_A 3lcp_A Length = 260

 Score = 62.5 bits (151), Expect = 6e-11
 Identities = 30/226 (13%), Positives = 65/226 (28%), Gaps = 27/226 (11%)

Query: 20  NLSLEGAAYISTSGILTVTNKSEGLIGHALYPNPLRFKTSNKSVAIDFRTNFVFSILPKY 79
             +  G A  S   I    +  +   G         F+        ++     F +  + 
Sbjct: 50  FWAHAGNAIPSADQIRIAPS-LKSQRGSVWTKTKAAFE--------NWEVEVTFRVTGR- 99

Query: 80  PDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTKFSTRMLAVEFDIIQNTELIDI 139
             +G  GLA            L     G  ++            + + FD   N    + 
Sbjct: 100 GRIGADGLAIWYT----ENQGLDGPVFGSADMWNG---------VGIFFDSFDNDGKKNN 146

Query: 140 NDNHVGIDISSLISSASEPASYYSGNNHRIPILLRSGDPIQAWVDYSSQEMLINVSICPL 199
               V  +   +        +  +  + +         P++A + Y  + + + ++    
Sbjct: 147 PAIVVVGNNGQINYDHQNDGATQALASCQRDFR-NKPYPVRAKITYYQKTLTVMINNGFT 205

Query: 200 GVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLITASHNVHGWSI 245
                Y     +    + VI    + G SA+TG +   H+V  +  
Sbjct: 206 PDKNDYEFCAKVE---NMVIPTQGHFGISAATGGLADDHDVLSFLT 248

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score = 63.2 bits (154), Expect = 9e-11
 Identities = 41/219 (18%), Positives = 80/219 (36%), Gaps = 34/219 (15%)

Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRI---GHNSQQGMKEF-------VAEIMSMGRLRH 386
            +G G F  V+          VA+K +      ++    E         A+      +  
Sbjct: 26  KLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGA 85

Query: 387 RNLVQLHGW----CRKQDELLLVYDYVPNGSLDKLLFD--KDHKLRKLLTWDQRYKILIG 440
            ++++L             +++V++      L + L    K ++ R +       +I   
Sbjct: 86  NHILKLLDHFNHKGPNGVHVVMVFE-----VLGENLLALIKKYEHRGI-PLIYVKQISKQ 139

Query: 441 IAQSLLYLHEECNQRVVHRDVKPSNILLD------TYLNAKLGDFGLAKIYEHGANPQTT 494
           +   L Y+H  C   ++H D+KP N+L++        +  K+ D G A  +       T 
Sbjct: 140 LLLGLDYMHRRCG--IIHTDIKPENVLMEIVDSPENLIQIKIADLGNA-CWYD--EHYTN 194

Query: 495 HIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGR 533
            I  T  Y +PE+          D++S   L+ E+  G 
Sbjct: 195 SIQ-TREYRSPEVLLGAPWGCGADIWSTACLIFELITGD 232

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score = 59.7 bits (145), Expect = 1e-09
 Identities = 49/206 (23%), Positives = 91/206 (44%), Gaps = 22/206 (10%)

Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS---QQGMKE--FVAEIMSMGRLRHRNLVQ 391
           ++G G FG+V +     +   VA+K + +     +Q  +E   +  +    +    N++ 
Sbjct: 104 VIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIH 163

Query: 392 LHGWCRKQDELLLVYDYVPNGSLDKLLFD--KDHKLRKLLTWDQRYKILIGIAQSLLYLH 449
           +      ++ + + ++      L   L++  K +K +       R K    I Q L  LH
Sbjct: 164 MLENFTFRNHICMTFE-----LLSMNLYELIKKNKFQGFSLPLVR-KFAHSILQCLDALH 217

Query: 450 EECNQRVVHRDVKPSNILLDTYLNA--KLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
           +    R++H D+KP NILL     +  K+ DFG +  YEH      T+I  +  Y APE+
Sbjct: 218 K---NRIIHCDLKPENILLKQQGRSGIKVIDFGSS-CYEH--QRVYTYIQ-SRFYRAPEV 270

Query: 508 TRTGKATTSTDVYSYGILMLEVACGR 533
               +     D++S G ++ E+  G 
Sbjct: 271 ILGARYGMPIDMWSLGCILAELLTGY 296

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A Length = 364

 Score = 59.0 bits (143), Expect = 2e-09
 Identities = 36/172 (20%), Positives = 64/172 (37%), Gaps = 32/172 (18%)

Query: 337 LVGSGGFGRVYRGLMPS-----LGLEVAIKRIGHNSQQ-----------GMKEFVAEIMS 380
            +G GGFG +Y   M S           +K    ++                E + + + 
Sbjct: 42  PIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIR 101

Query: 381 MGRLRHRNLVQLH--GWCRKQDEL--LLVYDYVPNG-SLDKLLFDKDHKLRKLLTWDQRY 435
             +L++  + +    G   K  +    ++ D    G  L K+      +  +        
Sbjct: 102 TRKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRF--GSDLQKIYEANAKRFSRKTV----L 155

Query: 436 KILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAK--LGDFGLAKIY 485
           ++ + I   L Y+HE      VH D+K SN+LL+     +  L D+GLA  Y
Sbjct: 156 QLSLRILDILEYIHE---HEYVHGDIKASNLLLNYKNPDQVYLVDYGLAYRY 204

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} Length = 352

 Score = 57.4 bits (139), Expect = 5e-09
 Identities = 32/181 (17%), Positives = 58/181 (32%), Gaps = 34/181 (18%)

Query: 338 VGSGGFGRVYRGLMPSLGL--------EVAIKRIGHNSQ----------QGMKEFVAEIM 379
                 G +Y     S           + ++K    + +                V +  
Sbjct: 50  QTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKDGRLFNEQNFFQRAAKPLQVNKWK 109

Query: 380 SMGRLRHRNLVQLHGWCRKQDEL-LLVYDYVPNG-SLDKLLFDKDHKLRKLLTWDQRYKI 437
            +       +    G+   QD+   LV   +  G SL   L   D   + +L+     ++
Sbjct: 110 KLYSTPLLAIPTCMGFGVHQDKYRFLVLPSL--GRSLQSAL---DVSPKHVLSERSVLQV 164

Query: 438 LIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAK--LGDFGLAKIYEHGANPQTTH 495
              +  +L +LHE      VH +V   NI +D    ++  L  +G A  Y     P   H
Sbjct: 165 ACRLLDALEFLHE---NEYVHGNVTAENIFVDPEDQSQVTLAGYGFAFRYC----PSGKH 217

Query: 496 I 496
           +
Sbjct: 218 V 218

>2ltn_B PEA lectin, beta chain; 1.70A {Pisum sativum} SCOP: b.29.1.1 PDB: 1hkd_B 1rin_B* 1ofs_B* 1bqp_B* 1loe_B 1loa_B* 1loc_B* 1lod_B* 1lob_B 1lof_B* 1log_B* 1lof_D* 1les_B* 2b7y_B* 1lgc_B* 1lgb_B* 1len_B 1lem_B 2lal_B Length = 52

 Score = 51.0 bits (122), Expect = 8e-09
 Identities = 15/36 (41%), Positives = 22/36 (61%)

Query: 209 ISLPIDLSSVIDEYMYTGFSASTGLITASHNVHGWS 244
           +S  + L  V+ E++  GFSA+TG   A+H V  WS
Sbjct: 6   LSDVVSLKDVVPEWVRIGFSATTGAEYAAHEVLSWS 41

>2dur_A VIP36;, vesicular integral-membrane protein VIP36; beta sandwich, carbohydrate binding protein, cargo receptor, transport; HET: MAN; 1.65A {Canis lupus familiaris} PDB: 2dup_A 2duq_A* 2duo_A* 2e6v_A* Length = 253

 Score = 54.1 bits (129), Expect = 4e-08
 Identities = 28/231 (12%), Positives = 65/231 (28%), Gaps = 34/231 (14%)

Query: 20  NLSLEGAAYISTSGILTVTNKSEGLIGHALYPNPLRFKTSNKSVAIDFRTNFVFSI-LPK 78
               +G+  +++  +    ++     G      P   K        D+  +  F +    
Sbjct: 26  LWDFQGSTILTSQYVRLTPDERS-KEGSIWNHQPCFLK--------DWEMHVHFKVHGTG 76

Query: 79  YPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTKFSTRMLAVEFDIIQNTELID 138
             +L G G+A         +  +     G  +             LA+  D   N E  +
Sbjct: 77  KKNLHGDGIALWYT----RDRLVPGPVFGSKDNFHG---------LAIFLDTYPNDETTE 123

Query: 139 INDNHVGI---DISSLISSASEPASYYSGNNHRIPILLRSGDPIQAWVDYSSQEMLINVS 195
               ++ +   + S     + +                         V YS   + +   
Sbjct: 124 RVFPYISVMVNNGSLSYDHSKDGRWTELAGCTAD--FRNRDHDTFLAVRYSRGRLTVMTD 181

Query: 196 ICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLITASHNVHGWSIS 246
           +        ++  I +       +    Y G SA TG ++ +H++    + 
Sbjct: 182 LEDKN---EWKNCIDIT---GVRLPTGYYFGASAGTGDLSDNHDIISMKLF 226

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* Length = 330

 Score = 54.3 bits (131), Expect = 5e-08
 Identities = 41/170 (24%), Positives = 64/170 (37%), Gaps = 28/170 (16%)

Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR 397
           +G G FG +  G        VAIK     S+                    + Q++ +  
Sbjct: 17  IGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQ-LGSGDGIPQVYYFGP 75

Query: 398 KQDELLLVYDYVPNG-SLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLL----YLHEEC 452
                 +V + +  G SL+ L    D             K ++ IA  L+    Y+H + 
Sbjct: 76  CGKYNAMVLELL--GPSLEDLFDLCDRTFS--------LKTVLMIAIQLISRMEYVHSKN 125

Query: 453 NQRVVHRDVKPSNILLDTYLNAK-----LGDFGLAKIYEHGANPQT-THI 496
              +++RDVKP N L+    N       + DF LAK Y    +P+T  HI
Sbjct: 126 ---LIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEY---IDPETKKHI 169

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score = 54.3 bits (131), Expect = 5e-08
 Identities = 48/207 (23%), Positives = 84/207 (40%), Gaps = 20/207 (9%)

Query: 336 NLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN---SQQGMKE--FVAEIMSMGRLRHRNLV 390
           +L+G G FG+V +         VAIK I +      Q   E   +  +          +V
Sbjct: 60  SLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIV 119

Query: 391 QLHGWCRKQDELLLVYDYVPNGSLDKLLFD--KDHKLRKLLTWDQRYKILIGIAQSLLYL 448
            L      ++ L LV++      L   L+D  ++   R +     R K    +  +LL+L
Sbjct: 120 HLKRHFMFRNHLCLVFE-----MLSYNLYDLLRNTNFRGVSLNLTR-KFAQQMCTALLFL 173

Query: 449 HEECNQRVVHRDVKPSNILLDTYLNA--KLGDFGLAKIYEHGANPQTTHIVGTLGYLAPE 506
                  ++H D+KP NILL     +  K+ DFG +            +I  +  Y +PE
Sbjct: 174 ATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFGSS-CQLG--QRIYQYIQ-SRFYRSPE 228

Query: 507 LTRTGKATTSTDVYSYGILMLEVACGR 533
           +        + D++S G +++E+  G 
Sbjct: 229 VLLGMPYDLAIDMWSLGCILVEMHTGE 255

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* Length = 298

 Score = 52.4 bits (126), Expect = 2e-07
 Identities = 40/171 (23%), Positives = 68/171 (39%), Gaps = 30/171 (17%)

Query: 338 VGSGGFGRVYRGLMPSLGLEVAIK--RIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGW 395
           +G G FG ++ G       +VAIK      ++ Q   E       +       +  ++ +
Sbjct: 18  IGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDE--YRTYKL-LAGCTGIPNVYYF 74

Query: 396 CRKQDELLLVYDYVPNG-SLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLL----YLHE 450
            ++    +LV D +  G SL+ LL     K           K +   A+ +L     +HE
Sbjct: 75  GQEGLHNVLVIDLL--GPSLEDLLDLCGRKFS--------VKTVAMAAKQMLARVQSIHE 124

Query: 451 ECNQRVVHRDVKPSNILLDTYLNAK-----LGDFGLAKIYEHGANPQTTHI 496
              + +V+RD+KP N L+    +       + DFG+ K Y      Q  HI
Sbjct: 125 ---KSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQ--HI 170

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} Length = 345

 Score = 52.0 bits (125), Expect = 3e-07
 Identities = 31/170 (18%), Positives = 60/170 (35%), Gaps = 31/170 (18%)

Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRI---GHNSQQGMKEFVAEIMSMGRLRHRNLVQLH 393
            +GSGGFG +Y     +   + A   +      +     E         +   +  ++  
Sbjct: 44  KIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERK 103

Query: 394 G----------WC-----RKQDELLLVYDYVPNG-SLDKLLFDKDHKLRKLLTWDQRYKI 437
                             + +    +V + +  G  L K+   ++   +K        ++
Sbjct: 104 QLDYLGIPLFYGSGLTEFKGRSYRFMVMERL--GIDLQKI-SGQNGTFKKSTV----LQL 156

Query: 438 LIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAK--LGDFGLAKIY 485
            I +   L Y+HE      VH D+K +N+LL      +  L D+GL+  Y
Sbjct: 157 GIRMLDVLEYIHE---NEYVHGDIKAANLLLGYKNPDQVYLADYGLSYRY 203

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A Length = 296

 Score = 50.8 bits (122), Expect = 5e-07
 Identities = 46/171 (26%), Positives = 75/171 (43%), Gaps = 32/171 (18%)

Query: 338 VGSGGFGRVYRGLMPSLGLEVAIK--RIGHNSQQGMKEFVAEIMSMGRLRH-RNLVQLHG 394
           +GSG FG +Y G   + G EVAIK   +     Q   E  ++I  M  ++    +  +  
Sbjct: 17  IGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIE--SKIYKM--MQGGVGIPTIRW 72

Query: 395 WCRKQDELLLVYDYVPNG-SLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLL----YLH 449
              + D  ++V + +  G SL+ L      K           K ++ +A  ++    Y+H
Sbjct: 73  CGAEGDYNVMVMELL--GPSLEDLFNFCSRKF--------SLKTVLLLADQMISRIEYIH 122

Query: 450 EECNQRVVHRDVKPSNILLDTYLNAK---LGDFGLAKIYEHGANPQT-THI 496
              ++  +HRDVKP N L+          + DFGLAK Y    + +T  HI
Sbjct: 123 ---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR---DARTHQHI 167

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} Length = 483

 Score = 51.5 bits (123), Expect = 5e-07
 Identities = 47/171 (27%), Positives = 75/171 (43%), Gaps = 32/171 (18%)

Query: 338 VGSGGFGRVYRGLMPSLGLEVAIK--RIGHNSQQGMKEFVAEIMSMGRLRHRNLV-QLHG 394
           +GSG FG +Y G       EVAIK   +     Q + E  ++I  +  L+    +  +  
Sbjct: 15  IGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYE--SKIYRI--LQGGTGIPNVRW 70

Query: 395 WCRKQDELLLVYDYVPNG-SLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLL----YLH 449
           +  + D  +LV D +  G SL+ L      KL          K ++ +A  ++    ++H
Sbjct: 71  FGVEGDYNVLVMDLL--GPSLEDLFNFCSRKL--------SLKTVLMLADQMINRVEFVH 120

Query: 450 EECNQRVVHRDVKPSNILLDTYLNAK---LGDFGLAKIYEHGANPQT-THI 496
            +     +HRD+KP N L+     A    + DFGLAK Y    +  T  HI
Sbjct: 121 SKS---FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYR---DTSTHQHI 165

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397

 Score = 46.8 bits (111), Expect = 1e-05
 Identities = 33/153 (21%), Positives = 47/153 (30%), Gaps = 55/153 (35%)

Query: 436 KILIGIAQSLLYLHEECNQRVVHRDVKPSNILL--------------------------- 468
           KI+  + Q L YLH +C   ++H D+KP NILL                           
Sbjct: 150 KIIQQVLQGLDYLHTKCR--IIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSG 207

Query: 469 ----------------------DTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPE 506
                                    L  K+ D G A           T  + T  Y + E
Sbjct: 208 SAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHK----HFTEDIQTRQYRSLE 263

Query: 507 LTRTGKATTSTDVYSYGILMLEVACGRRSIEPQ 539
           +       T  D++S   +  E+A G    EP 
Sbjct: 264 VLIGSGYNTPADIWSTACMAFELATGDYLFEPH 296

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360

 Score = 44.2 bits (105), Expect = 8e-05
 Identities = 32/142 (22%), Positives = 58/142 (40%), Gaps = 23/142 (16%)

Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS---QQGMKEFVAEIMSMGRLRHR-----N 388
            +G G FGRV            A+K + +     +    E  A+I+   ++++      N
Sbjct: 42  KMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIE--ADILK--KIQNDDINNNN 97

Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSLDKLLFD--KDHKLRKLLTWDQRYKILIGIAQSLL 446
           +V+ HG     D + L+++      L   L++    +        +      I I ++L 
Sbjct: 98  IVKYHGKFMYYDHMCLIFE-----PLGPSLYEIITRNNYNGF-HIEDIKLYCIEILKALN 151

Query: 447 YLHEECNQRVVHRDVKPSNILL 468
           YL +     + H D+KP NILL
Sbjct: 152 YLRKM---SLTHTDLKPENILL 170

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355

 Score = 43.1 bits (102), Expect = 2e-04
 Identities = 46/227 (20%), Positives = 83/227 (36%), Gaps = 48/227 (21%)

Query: 337 LVGSGGFGRVYRGL-MPSLGLEVAIKRIGHNS---QQGMKEFVAEIMSMGRLRHR----- 387
            +G G FG+V   L       +VA+K I +     +    E    ++   +++ +     
Sbjct: 26  NLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLE--INVLK--KIKEKDKENK 81

Query: 388 -NLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFD--KDHKLRKLLTWDQRYKILIGIAQS 444
              V +  W      + + ++      L K  F+  K++  +       R  +   +  +
Sbjct: 82  FLCVLMSDWFNFHGHMCIAFE-----LLGKNTFEFLKENNFQPYPLPHVR-HMAYQLCHA 135

Query: 445 LLYLHEECNQRVVHRDVKPSNILLDTYLNA-------------------KLGDFGLAKIY 485
           L +LHE    ++ H D+KP NIL                          ++ DFG A  +
Sbjct: 136 LRFLHEN---QLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA-TF 191

Query: 486 EHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACG 532
           +H     TT +  T  Y  PE+          DV+S G ++ E   G
Sbjct: 192 DH--EHHTTIVA-TRHYRPPEVILELGWAQPCDVWSIGCILFEYYRG 235

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	653
3ipv_A	251	Lectin alpha chain; galactose binding, SEED lectin	100.0
3zyr_A	261	Lectin; sugar binding protein, N-glycan; HET: NAG	100.0
3ujo_A	281	Legume lectin; carbohydrate-binding, galactose, ad	100.0
1dbn_A	239	MAL, protein (leukoagglutinin); plant lectin, carb	100.0
1fny_A	237	BARK lectin, BARK agglutinin I,polypeptide A; legu	100.0
1fx5_A	242	UEA-I, UE-I, anti-H(O) lectin I; legume lectin, HO	100.0
1v6i_A	232	Agglutinin, PNA, galactose-binding lectin; open qu	100.0
1hql_A	257	Lectin; xenograft antigen, sugar BI protein; HET:	100.0
1gzc_A	239	Erythrina crista-galli lectin; carbohydrate, sugar	100.0
1qnw_A	242	Chitin binding lectin, UEA-II; carbohydrate bindin	100.0
2eig_A	234	Lectin; L-fucosyl, N-acetyl-D-glucosamine, SUG bin	100.0
1sbf_A	253	Soybean agglutinin; lectin; HET: NAG GAL; 2.43A {G	100.0
1g7y_A	253	Stem/LEAF lectin DB58; jelly roll fold, sugar bind	100.0
2fmd_A	240	Lectin, agglutinin, BMA; legume lectin, beta sandw	100.0
1fat_A	252	Phytohemagglutinin-L; glycoprotein, plant defense	100.0
2bqp_A	234	Protein (PEA lectin); D-glucopyranose complex, sug	100.0
1n47_A	233	Isolectin B4; cancer antigen, vicia villosa lectin	100.0
1wbf_A	242	Protein (agglutinin); lectin (agglutinin), legume	100.0
1f9k_A	238	Acidic lectin; legume lectin, glycosylated protein	100.0
1gsl_A	243	Griffonia simplicifolia lectin 4; glycoprotein, ma	100.0
1avb_A	226	Arcelin-1; lectin-like glycoprotein, plant defense	100.0
1ioa_A	240	Arcelin-5A, ARC5A; lectin-like proteins, plant def	100.0
1dhk_B	223	Bean lectin-like inhibitor, porcine pancreatic alp	100.0
4aoj_A	329	High affinity nerve growth factor receptor; transf	100.0
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	100.0
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	100.0
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	100.0
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	100.0
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	100.0
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	100.0
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	100.0
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
2ltn_A	181	PEA lectin, alpha chain; 1.70A {Pisum sativum} SCO	100.0
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	100.0
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	100.0
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	100.0
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	100.0
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	100.0
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	100.0
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	100.0
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	100.0
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	100.0
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	100.0
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	100.0
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	100.0
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	100.0
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	100.0
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	100.0
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	100.0
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	100.0
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	100.0
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	100.0
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	100.0
3soc_A	322	Activin receptor type-2A; structural genomics cons	100.0
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	100.0
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	100.0
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	100.0
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	100.0
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	100.0
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	100.0
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	100.0
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	100.0
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	100.0
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	100.0
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	100.0
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	100.0
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	100.0
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	100.0
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	100.0
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	100.0
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	100.0
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	100.0
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	100.0
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	100.0
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	100.0
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	100.0
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	100.0
3o0g_A	292	Cell division protein kinase 5; kinase activator c	100.0
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	100.0
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	100.0
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	100.0
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	100.0
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	100.0
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	100.0
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	100.0
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	100.0
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	100.0
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	100.0
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	100.0
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	100.0
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	100.0
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	100.0
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	100.0
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	100.0
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	100.0
3q4u_A	301	Activin receptor type-1; structural genomics conso	100.0
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	100.0
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	100.0
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	100.0
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	100.0
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	100.0
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	100.0
3niz_A	311	Rhodanese family protein; structural genomics, str	100.0
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	100.0
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	100.0
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	100.0
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	100.0
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	100.0
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	100.0
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	100.0
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	100.0
3ork_A	311	Serine/threonine protein kinase; structural genomi	100.0
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	100.0
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	100.0
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	100.0
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	100.0
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	100.0
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	100.0
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	100.0
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	100.0
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	100.0
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	100.0
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	100.0
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	100.0
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	100.0
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	100.0
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	100.0
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	100.0
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	100.0
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	100.0
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	100.0
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	100.0
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	100.0
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	100.0
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	100.0
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	100.0
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	100.0
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	100.0
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	100.0
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	100.0
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	100.0
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	100.0
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	100.0
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	100.0
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	100.0
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	100.0
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	100.0
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	100.0
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	100.0
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	100.0
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	100.0
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	100.0
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	100.0
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	100.0
2a19_B	284	Interferon-induced, double-stranded RNA-activated	100.0
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	100.0
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	100.0
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	100.0
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	100.0
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	100.0
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	100.0
3pls_A	298	Macrophage-stimulating protein receptor; protein k	100.0
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	100.0
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	100.0
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	100.0
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	100.0
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	100.0
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	100.0
3bhy_A	283	Death-associated protein kinase 3; death associate	100.0
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	100.0
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	100.0
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	100.0
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	100.0
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	100.0
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	100.0
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	100.0
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	100.0
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	100.0
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	100.0
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	100.0
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	100.0
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	100.0
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	100.0
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	100.0
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	100.0
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	100.0
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	100.0
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	100.0
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	100.0
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	100.0
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	100.0
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	100.0
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	100.0
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	100.0
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	100.0
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	100.0
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	100.0
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
3rp9_A	458	Mitogen-activated protein kinase; structural genom	100.0
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	100.0
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	100.0
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	100.0
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	100.0
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	100.0
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	100.0
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	100.0
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	100.0
3fme_A	290	Dual specificity mitogen-activated protein kinase;	100.0
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	100.0
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	100.0
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	100.0
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	100.0
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	100.0
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	100.0
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	100.0
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	100.0
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	100.0
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	100.0
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	100.0
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	100.0
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	100.0
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	100.0
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	100.0
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	100.0
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	100.0
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	100.0
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	100.0
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	100.0
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	100.0
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	100.0
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	100.0
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	100.0
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	100.0
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	100.0
3an0_A	340	Dual specificity mitogen-activated protein kinase;	100.0
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	100.0
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	100.0
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	100.0
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	100.0
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	100.0
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	100.0
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	100.0
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	100.0
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	100.0
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	100.0
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	100.0
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	100.0
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	100.0
3aln_A	327	Dual specificity mitogen-activated protein kinase;	100.0
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	100.0
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	100.0
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	100.0
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	100.0
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	100.0
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	100.0
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	100.0
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	100.0
2dyl_A	318	Dual specificity mitogen-activated protein kinase	100.0
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	100.0
1qmo_E	133	Mannose binding lectin, FRIL; crosslink, hematopoi	100.0
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	100.0
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	100.0
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	100.0
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	100.0
3uqc_A	286	Probable conserved transmembrane protein; structur	100.0
2dur_A	253	VIP36;, vesicular integral-membrane protein VIP36;	100.0
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	100.0
1gv9_A	260	P58/ergic-53; lectin, carbohydrate binding; 1.46A	100.0
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	100.0
1nls_A	237	Concanavalin A; lectin, agglutinin; 0.94A {Canaval	99.98
1qmo_A	113	Mannose binding lectin, FRIL; crosslink, hematopoi	99.96
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.95
2a6y_A	256	EMP47P (FORM1); beta sandwich, carbohydrate bindin	99.93
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.92
1nls_A	237	Concanavalin A; lectin, agglutinin; 0.94A {Canaval	99.9
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.87
2a6z_A	222	EMP47P (FORM2); beta sandwich, carbohydrate bindin	99.78
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.77
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	99.63
2a6v_A	226	EMP46P; beta sandwich, carbohydrate binding protei	99.5
2ltn_B	52	PEA lectin, beta chain; 1.70A {Pisum sativum} SCOP	99.47
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	99.27
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	99.09
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	98.97
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	98.84
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	98.61
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	98.39
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	98.37
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	98.37
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	98.21
3ats_A	357	Putative uncharacterized protein; hypothetical pro	98.03
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	97.94
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	97.83
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	97.38
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	97.35
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	97.35
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	97.25
1nw1_A	429	Choline kinase (49.2 KD); phospholipid synthesis,	97.19
2qg7_A	458	Ethanolamine kinase PV091845; malaria, SGC, struct	97.08
3feg_A	379	Choline/ethanolamine kinase; non-protein kinase, c	97.07
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	96.95
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	96.87
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	96.86
3c5i_A	369	Choline kinase; choline, kinase, malaria, transfer	96.63
2yle_A	229	Protein spire homolog 1; actin-binding protein, ac	96.58
3f2s_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	96.35
3i1a_A	339	Spectinomycin phosphotransferase; protein kinase,	95.68
3mes_A	424	Choline kinase; malaria, structural genomics, stru	94.16
3g15_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	92.8
2ks1_B	44	Epidermal growth factor receptor; ERBB1, ERBB2, tr	85.27
2l2t_A	44	Receptor tyrosine-protein kinase ERBB-4; transmemb	84.14
3cxl_A	463	N-chimerin; SH2, RHO-GAP, structural genomics cons	81.9

>3ipv_A Lectin alpha chain; galactose binding, SEED lectin, hemagglutinin, legume lectin fungal, sugar binding protein; 2.04A {Spatholobus parviflorus} PDB: 3ipv_B 3usu_B* 3usu_A*

Probab=100.00  E-value=1.4e-62  Score=484.28  Aligned_cols=224  Identities=30%  Similarity=0.475  Sum_probs=204.6

Q ss_pred             CceeEEeCCCC--CCCeEEecceEecCCCcEEecCCCCC------ceEEEEcCCCeecccCCCCceeeeEEEEEEEEecC
Q 048419            7 DTTSFLYNGFL--HANLSLEGAAYISTSGILTVTNKSEG------LIGHALYPNPLRFKTSNKSVAIDFRTNFVFSILPK   78 (653)
Q Consensus         7 ~~~~f~~~~f~--~~~l~~~g~a~~~~~g~l~Lt~~~~~------~~Gr~~y~~pi~~~~~~~~~~~sF~t~F~f~i~~~   78 (653)
                      ++++|+|++|.  ..||+|+|||++.++|.|+||+....      ++|||+|++||+|||+++++++||+|+|+|.|.+.
T Consensus         2 ~~~sF~f~~F~~~~~nl~l~GdA~v~~~g~L~LT~~~~~~~~~~~s~Gra~Y~~Pi~l~d~~tg~vaSFsT~F~F~I~~~   81 (251)
T 3ipv_A            2 EETSFVFSKFKPLEPNLILQGDALVTVAGVLQLTNVDKNGVPEPSSLGRATYSAPINIWDSATGLVASFATSFRFTIYAP   81 (251)
T ss_dssp             EEEEEEESSCCSSCTTEEEEETCEECTTSCEESSCBCTTSCBCSSCEEEEEESSCEECBCTTTCCBCEEEEEEEEECCCS
T ss_pred             cceEEEeCCCCCCCCCeEEeccEEecCCCeEEcCCCCCCCcccCCcEEEEEECCCEEeecCCCCceeeEEEEEEEEEeCC
Confidence            46899999997  68999999999987999999998755      99999999999999999999999999999999988


Q ss_pred             CCCCCCCceEEEEecCCCCCCCCCCccccCCCcccCCCCCCCCceEEEEeecccccccCCCCCCeeeEecCCCCcCCccc
Q 048419           79 YPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTKFSTRMLAVEFDIIQNTELIDINDNHVGIDISSLISSASEP  158 (653)
Q Consensus        79 ~~~~~gdGlaF~l~~~~~~~~~~~g~~lG~~~~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~~~Hvgid~ns~~s~~~~~  158 (653)
                      +...+||||||||+|....+. .+|+||||+|.+++   +..+|+|||||||++|.+|+||++|||||||||+.|.++++
T Consensus        82 ~~~~~gdGlAF~lap~~~~~~-~~gg~LGL~n~~~~---~~~n~~vAVEFDT~~n~~~~Dp~~nHVGIdvNsi~S~~t~~  157 (251)
T 3ipv_A           82 NIATIADGLAFFLAPVASAPD-SGGGFLGLFDSAVS---GSTYQTVAVEFDTYENTVFTDPPYTHIGFDVNSISSIKTVK  157 (251)
T ss_dssp             STTSCCEEEEEEEEETTCCCC-CCGGGTTTCSSSSC---CTTSCCEEEEEECSCCGGGTCCSSCEEEEEESSSSCSEEEE
T ss_pred             CCCCCCCceEEEEecCCCCCC-CCCceeeeccccCC---CccCcEEEEEEecccccccCCCCCCeEEEEcCCCcccccce
Confidence            777899999999999876655 57899999998654   55789999999999998888999999999999999998876


Q ss_pred             CccccCCCCccccccCCCCceEEEEEecCCceEEEEEEeeCCCCCCCCCceeeeecCCcccccceEEeEecccCcc---c
Q 048419          159 ASYYSGNNHRIPILLRSGDPIQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLI---T  235 (653)
Q Consensus       159 ~~~~~~~~~~~~~~l~~g~~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~~l~~~~dL~~~l~~~~~vGFsastg~~---~  235 (653)
                      |            .+.+|+.++|||+||+.+++|+|+|.+.+.  |..|+|++.|||+++|||+||||||||||..   .
T Consensus       158 ~------------~l~~G~~~~v~I~Yd~~tk~L~V~l~~~~~--~~~~~ls~~vdL~~~l~e~v~VGFSAsTG~~~~~~  223 (251)
T 3ipv_A          158 W------------SLANGEAAKVLITYNSAVKLLVASLVYPSS--KTSFILADIVDLSSVLPEWVRVGFSAATGASGGKI  223 (251)
T ss_dssp             C------------CCCTTCEEEEEEEEETTTTEEEEEEECTTT--CCEEEEEEECCHHHHSCSEEEEEEEEEECSSTTCC
T ss_pred             e------------EecCCCEEEEEEEEeCCCCEEEEEEecCCC--CccceEEEEechHHhCCCcEEEEEEEecCCCcccc
Confidence            5            467999999999999999999999997664  5678999999999999999999999999998   8


Q ss_pred             ceeeecceeeeec
Q 048419          236 ASHNVHGWSISIG  248 (653)
Q Consensus       236 ~~~~i~sWsf~~~  248 (653)
                      |.|+|++|+|++.
T Consensus       224 e~h~IlsWsF~s~  236 (251)
T 3ipv_A          224 ETHDVFSWSFASK  236 (251)
T ss_dssp             CCCEEEEEEEEEE
T ss_pred             ceeEEEEEEEEEE
Confidence            9999999999875

>3zyr_A Lectin; sugar binding protein, N-glycan; HET: NAG BMA MAN GOL; 1.65A {Platypodium elegans} SCOP: b.29.1.1 PDB: 3zvx_A* 1ukg_A* 1q8o_A* 1q8q_A* 1q8s_A* 1q8v_A* 1q8p_A* 2auy_A* 2gme_A 2gmm_A* 2gmp_A* 2gn3_A* 2gn7_A* 2gnb_A* 2gnd_A* 2gnm_A* 2gnt_A 2phf_A* 2phr_A* 2pht_A* ...

Probab=100.00  E-value=8e-62  Score=480.10  Aligned_cols=227  Identities=27%  Similarity=0.398  Sum_probs=203.9

Q ss_pred             eccCceeEEeCCCC--CCCeEEecceEecCCCcEEecCCCC------CceEEEEcCCCeecccCCCCceeeeEEEEEEEE
Q 048419            4 VHADTTSFLYNGFL--HANLSLEGAAYISTSGILTVTNKSE------GLIGHALYPNPLRFKTSNKSVAIDFRTNFVFSI   75 (653)
Q Consensus         4 ~~~~~~~f~~~~f~--~~~l~~~g~a~~~~~g~l~Lt~~~~------~~~Gr~~y~~pi~~~~~~~~~~~sF~t~F~f~i   75 (653)
                      .++..++|+|++|.  ..||+|+|||++.++|.|+||+...      .++|||+|++||+|||+++|+++||+|+|+|.|
T Consensus         7 ~sa~~~sF~f~~F~~~~~~l~l~GdA~i~~~g~L~LT~~~~~~~~~~~s~Gra~Y~~Pv~l~d~~tg~vaSFsT~F~F~I   86 (261)
T 3zyr_A            7 NSTDSLSFSFINFDRDERNLIFQGDAHTSRNNILQLTRTDSNGAPVRSTVGRILHSAQVRLWEKSTNRVANLQTQFSFFL   86 (261)
T ss_dssp             -CCEEEEEEESSCCSCCTTEEEEETCEECTTSCEECSCBCTTSCBCSSEEEEEEESSCEECBCTTTCCBEEEEEEEEEEE
T ss_pred             CcCcccEEEcCCCCCCCCCeEEeccEEecCCCeEEeCCCCCCCccccCCEEEEEECCCEEeecCCCCCceeEEEEEEEEE
Confidence            45678999999997  6899999999997799999999765      799999999999999999999999999999999


Q ss_pred             ecCCCCCCCCceEEEEecCCCC-CCCCCCccccCCCcccCCCCCCCCceEEEEeecc---cccccCCCCCCeeeEecCCC
Q 048419           76 LPKYPDLGGQGLAFIIISTNRP-ENCLANQFLGLPNITMSSSTKFSTRMLAVEFDII---QNTELIDINDNHVGIDISSL  151 (653)
Q Consensus        76 ~~~~~~~~gdGlaF~l~~~~~~-~~~~~g~~lG~~~~~~~~~~~~~~~~vaVEFDt~---~n~~~~d~~~~Hvgid~ns~  151 (653)
                      .+. ...+||||||||+|.... |.+.+|+||||+|.+++. +...||+|||||||+   +|.+| ||++|||||||||+
T Consensus        87 ~~~-~~~~gdGlAF~lap~~~~~p~~~~g~~LGL~n~~~~g-~~~~n~~vAVEFDT~~~~~n~~~-Dp~~nHVGIdvNsi  163 (261)
T 3zyr_A           87 SSP-LSNPADGIAFFIAPPDTTIPSGSAGGLLGLFNPRTAL-NESANQVLAVEFDTFFAQNSNTW-DPNYQHIGIDVNSI  163 (261)
T ss_dssp             ECS-SSSCCCEEEEEEECTTCCCCTTCCGGGTTTCCTTTTT-CGGGCCCEEEEEECCCCTTTCTT-SCSSCEEEEEESSS
T ss_pred             ecC-CCCCCccEEEEEccCCCCCCCCCCCceeeeecccccC-CCccCcEEEEEEeccccccCcCC-CCCCCeEEEEcCCC
Confidence            886 667999999999998754 778899999999986541 234689999999999   99776 99999999999999


Q ss_pred             CcCCcccCccccCCCCccccccCCCCceEEEEEecCCceEEEEEEeeCCCCCCCCCceeeeecCCcccccceEEeEeccc
Q 048419          152 ISSASEPASYYSGNNHRIPILLRSGDPIQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSAST  231 (653)
Q Consensus       152 ~s~~~~~~~~~~~~~~~~~~~l~~g~~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~~l~~~~dL~~~l~~~~~vGFsast  231 (653)
                      .|.++++|            .+.+|+.++|||+||+.+++|+|+|.+.+.   ..|+|++.|||+++|||+|||||||||
T Consensus       164 ~S~~s~~~------------~l~~G~~~~v~I~Yd~~~~~L~V~l~~~~~---~~~~ls~~vdL~~~l~e~v~VGFSAsT  228 (261)
T 3zyr_A          164 RSSKVVRW------------ERREGKTLNVLVTYNPSTRTIDVVATYPDG---QRYQLSHVVDLTTILPEWVRVGFSAAS  228 (261)
T ss_dssp             SCSEEEEC------------CCCTTCCEEEEEEEETTTTEEEEEEECTTC---CEEEEEEECCGGGTSCSEEEEEEEEEE
T ss_pred             Cccccccc------------cccCCceEEEEEEEcCCCCEEEEEEEcCCC---CCeEEEEEechHHhCcCcEEEEEEecC
Confidence            99988775            356899999999999999999999997653   378999999999999999999999999


Q ss_pred             Ccccceeeecceeeeec
Q 048419          232 GLITASHNVHGWSISIG  248 (653)
Q Consensus       232 g~~~~~~~i~sWsf~~~  248 (653)
                      |...|.|+|++|+|++.
T Consensus       229 G~~~e~h~IlsWsF~s~  245 (261)
T 3zyr_A          229 GEQFQTHNLESWSFTST  245 (261)
T ss_dssp             SSSCCEEEEEEEEEEEE
T ss_pred             CCccceEEEEEEEEEEE
Confidence            99999999999999875

>3ujo_A Legume lectin; carbohydrate-binding, galactose, adenine binding protein; HET: ADE GAL; 2.00A {Dolichos lablab} PDB: 3ujq_A* 3uk9_A* 3ul2_A* 1fat_A* 1g8w_A*

Probab=100.00  E-value=6e-62  Score=484.54  Aligned_cols=225  Identities=28%  Similarity=0.460  Sum_probs=203.6

Q ss_pred             eccCceeEEeCCCCCCCeEEecceEecCCCcEEecCCCCC------ceEEEEcCCCeecccCCCCceeeeEEEEEEEEec
Q 048419            4 VHADTTSFLYNGFLHANLSLEGAAYISTSGILTVTNKSEG------LIGHALYPNPLRFKTSNKSVAIDFRTNFVFSILP   77 (653)
Q Consensus         4 ~~~~~~~f~~~~f~~~~l~~~g~a~~~~~g~l~Lt~~~~~------~~Gr~~y~~pi~~~~~~~~~~~sF~t~F~f~i~~   77 (653)
                      .++..++|+|++|..+||+|+|||++. +|.|+||+....      ++|||+|++||+|||+++|+++||+|+|+|.|.+
T Consensus        22 ~sa~~~sF~f~~F~~~nL~l~GdA~i~-~g~L~LT~~~~~~~p~~~s~Gra~Y~~Pi~l~d~~tg~vaSFsTsFsF~I~~  100 (281)
T 3ujo_A           22 ASANLISFTFKKFNETNLILQRDATVS-SGKLRITKAAENGVPTAGSLGRAFYSTPIQIWDNTTGTVASWATSFTFNLQA  100 (281)
T ss_dssp             --CEEEEEEESSCCSTTEEECSSCCCB-TTBEECSCCCSSCCCCSSCEEEEEESSCEECBCSSSCCBEEEEEEEEEECCC
T ss_pred             CcCCcceEEcCCCCccCEEEecceEEe-CCEEEeCCCCCCCcccCCceEEEEECCCEEcccCCCCCceeEEEEEEEEEec
Confidence            345678999999998999999999997 999999998754      9999999999999999999999999999999998


Q ss_pred             CCCCCCCCceEEEEecCCCCCCCCCCccccCCCcccCCCCCCCCceEEEEeecccccccCCCCCCeeeEecCCCCcCCcc
Q 048419           78 KYPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTKFSTRMLAVEFDIIQNTELIDINDNHVGIDISSLISSASE  157 (653)
Q Consensus        78 ~~~~~~gdGlaF~l~~~~~~~~~~~g~~lG~~~~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~~~Hvgid~ns~~s~~~~  157 (653)
                      .+...+||||||||+|....|. .+||||||+|.+++   +..+|+|||||||++|.+| ||++|||||||||+.|.++.
T Consensus       101 ~~~~~~gdGlAF~laP~~~~p~-~~gg~LGL~n~~~~---~~~n~~vAVEFDT~~N~e~-Dp~~nHVGIDvNSi~S~~t~  175 (281)
T 3ujo_A          101 PNAASPADGLAFALVPVGSQPK-DKGGFLGLFDSKNY---ASSNQTVAVEFDTFYNGGW-DPTERHIGIDVNSIKSIKTT  175 (281)
T ss_dssp             SSTTSCCEEEEEEEEETTCCCC-CCGGGTTTCSCSSC---CTTSCCEEEEECCSCCCSS-CCSSSEEEEEESSSCCSCEE
T ss_pred             CCCCCCCCceEEEEecCCCCCC-CCcceeeeccccCC---CccCcEEEEEEeccccccC-CCCCCeEEEEcCCCCccccc
Confidence            8777899999999999876654 67899999998654   5678999999999999886 99999999999999999988


Q ss_pred             cCccccCCCCccccccCCCCceEEEEEecCCceEEEEEEeeCCCCCCCCCceeeeecCCcccccceEEeEecccCc---c
Q 048419          158 PASYYSGNNHRIPILLRSGDPIQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGL---I  234 (653)
Q Consensus       158 ~~~~~~~~~~~~~~~l~~g~~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~~l~~~~dL~~~l~~~~~vGFsastg~---~  234 (653)
                      +|.            +.+|+.++|||+||+.+++|+|++.+.+.  ++.|+|++.|||+++|||+||||||||||.   .
T Consensus       176 ~~~------------l~~G~~~~vwI~Yd~~tk~L~V~l~~~~~--~~~~~lS~~vDL~~~L~e~v~VGFSAsTG~~~~~  241 (281)
T 3ujo_A          176 SWD------------FANGENAEVLITYDSSTNLLVASLVHPSQ--KTSFIVSERVDLTSVLPEWVSVGFSATTGLSKGY  241 (281)
T ss_dssp             ECC------------CCSSCCEEEEEEECTTTCEEEEEEECTTT--CCCEEEEEECCSTTTSCSEEEEEEEEEECSSTTS
T ss_pred             ccc------------ccCCCEEEEEEEEeCCCCEEEEEEecCCC--CCCceEEEEechHHhccCcEEEEEEeecCCCCcc
Confidence            753            56999999999999999999999998764  457899999999999999999999999996   5


Q ss_pred             cceeeecceeeeec
Q 048419          235 TASHNVHGWSISIG  248 (653)
Q Consensus       235 ~~~~~i~sWsf~~~  248 (653)
                      .|.|+|++|+|++.
T Consensus       242 ~e~H~IlsWSFss~  255 (281)
T 3ujo_A          242 VETNEVLSWSFASK  255 (281)
T ss_dssp             CCCCEEEEEEEEEE
T ss_pred             cceeEEEEEEEEEE
Confidence            89999999999875

>1dbn_A MAL, protein (leukoagglutinin); plant lectin, carbohydrate binding, sialyllactose, sugar BIN protein; HET: NAG SIA GAL BGC; 2.75A {Maackia amurensis} SCOP: b.29.1.1

Probab=100.00  E-value=1e-60  Score=470.68  Aligned_cols=223  Identities=28%  Similarity=0.444  Sum_probs=203.3

Q ss_pred             CceeEEeCCCC--CCCeEEecceEecCCCcEEecCCC-----CCceEEEEcCCCeecccCCCCceeeeEEEEEEEEecCC
Q 048419            7 DTTSFLYNGFL--HANLSLEGAAYISTSGILTVTNKS-----EGLIGHALYPNPLRFKTSNKSVAIDFRTNFVFSILPKY   79 (653)
Q Consensus         7 ~~~~f~~~~f~--~~~l~~~g~a~~~~~g~l~Lt~~~-----~~~~Gr~~y~~pi~~~~~~~~~~~sF~t~F~f~i~~~~   79 (653)
                      .+++|+|+.|.  ..||+|+|||++.++|.|+||++.     ..++|||+|++||+||++.+++++||+|+|+|.|.+.+
T Consensus         2 ~~~~F~f~~F~~~~~~l~l~G~A~v~~~g~l~LT~~~~~~~~~~~~Gra~y~~Pi~l~~~~tg~vaSFsT~F~F~I~~~~   81 (239)
T 1dbn_A            2 DELSFTINNFVPNEADLLFQGEASVSSTGVLQLTKVENGQPQKYSVGRALYAAPVRIWGNTTGSVASFSTSFTFVVKAPN   81 (239)
T ss_dssp             CEEEEEESSCCTTCTTEEEEETCEECTTSCEESSCEETTEECSSCEEEEEESSCEECBCTTTCCBCEEEEEEEEECCCSS
T ss_pred             cceEEEcCCCCCCCCCeEEcccEEecCCCcEEeCCCCCCCcccCceEEEEeCCCEecccCCCCCccceEEEEEEEEeCCC
Confidence            56899999998  689999999999878999999876     67999999999999999999999999999999999877


Q ss_pred             CCCCCCceEEEEecCCC-CCCCCCCccccCCCcccCCCCCCCCceEEEEeecccc---cccCCCCCCeeeEecCCCCcCC
Q 048419           80 PDLGGQGLAFIIISTNR-PENCLANQFLGLPNITMSSSTKFSTRMLAVEFDIIQN---TELIDINDNHVGIDISSLISSA  155 (653)
Q Consensus        80 ~~~~gdGlaF~l~~~~~-~~~~~~g~~lG~~~~~~~~~~~~~~~~vaVEFDt~~n---~~~~d~~~~Hvgid~ns~~s~~  155 (653)
                      ...+||||||||+|... .|.+++|+||||+|..+   ++..+|+|||||||++|   .+ +||++||||||+||+.|.+
T Consensus        82 ~~~~gdGlAF~l~p~~~~~p~~~~g~~LGl~n~~~---~~~~~~~vAVEFDT~~n~~~~~-~Dp~~nHVGIdvNs~~S~~  157 (239)
T 1dbn_A           82 PDITSDGLAFYLAPPDSQIPSGSVSKYLGLFNNSN---SDSSNQIVAVEFDTYFAHSYDP-WDPNYRHIGIDVNGIESIK  157 (239)
T ss_dssp             TTSCCEEEEEEEECTTCCCCSSSCGGGTTSCSSSC---CCTTSCCEEEEEECCCCTTTCT-TSCSSCEEEEEESSSSCSE
T ss_pred             CCCCCCCEEEEEecCCCCCCcCCCCCcccccccCC---CCccccEEEEEEeccccCcccc-cCCCCCcEEEecCCccccc
Confidence            77799999999999875 47778899999998653   35678999999999999   77 6999999999999999998


Q ss_pred             cccCccccCCCCccccccCCCCceEEEEEecCCceEEEEEEeeCCCCCCCCCceeeeecCCcccccceEEeEecccCcc-
Q 048419          156 SEPASYYSGNNHRIPILLRSGDPIQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLI-  234 (653)
Q Consensus       156 ~~~~~~~~~~~~~~~~~l~~g~~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~~l~~~~dL~~~l~~~~~vGFsastg~~-  234 (653)
                      +++|            +|.+|+.++|||+||+.+++|+|+|.+.+.  |..|+|++.|||+++|||+||||||||||.. 
T Consensus       158 ~~~~------------~l~~g~~~~v~I~Yd~~~~~L~V~l~~~~~--~~~~~ls~~vdL~~~l~e~v~VGFSAsTG~~~  223 (239)
T 1dbn_A          158 TVQW------------DWINGGVAFATITYLAPNKTLIASLVYPSN--QTTFSVAASVDLKEILPEWVRVGFSAATGYPT  223 (239)
T ss_dssp             EEEC------------CCCTTCCEEEEEEEEGGGTEEEEEEEETTT--TEEEEEEEECCHHHHSCSEEEEEEEEEECSGG
T ss_pred             eEcc------------cccCCCEEEEEEEEeCCCcEEEEEEccCCC--CCcceEEEEechHHhCCccEEEEEEeccCCCc
Confidence            8775            377999999999999999999999988754  5578999999999999999999999999998 


Q ss_pred             -cceeeecceeeee
Q 048419          235 -TASHNVHGWSISI  247 (653)
Q Consensus       235 -~~~~~i~sWsf~~  247 (653)
                       .|.|+|++|+|++
T Consensus       224 ~~~~h~IlsWsF~s  237 (239)
T 1dbn_A          224 EVETHDVLSWSFTS  237 (239)
T ss_dssp             GCCCCEEEEEEEEE
T ss_pred             cceeeEEEEEEeEe
Confidence             9999999999985

>1fny_A BARK lectin, BARK agglutinin I,polypeptide A; legume lectin, jelly roll, sugar binding protein; 1.81A {Robinia pseudoacacia} SCOP: b.29.1.1 PDB: 1fnz_A*

Probab=100.00  E-value=1.1e-60  Score=469.22  Aligned_cols=223  Identities=26%  Similarity=0.428  Sum_probs=201.0

Q ss_pred             CceeEEeCCCC--CCCeEEecceEecCCCcEEecCCC-----CCceEEEEcCCCeecccCCCCceeeeEEEEEEEEecCC
Q 048419            7 DTTSFLYNGFL--HANLSLEGAAYISTSGILTVTNKS-----EGLIGHALYPNPLRFKTSNKSVAIDFRTNFVFSILPKY   79 (653)
Q Consensus         7 ~~~~f~~~~f~--~~~l~~~g~a~~~~~g~l~Lt~~~-----~~~~Gr~~y~~pi~~~~~~~~~~~sF~t~F~f~i~~~~   79 (653)
                      .+++|+|+.|.  ..||+|+|||++.++|.|+||++.     ..++|||+|++||+||++.+++++||+|+|+|.|.+.+
T Consensus         2 ~~~~F~f~~F~~~~~~l~l~G~A~v~~~g~l~LT~~~~~~~~~~~~Gra~y~~Pi~l~d~~tg~vaSFsT~F~F~I~~~~   81 (237)
T 1fny_A            2 GSLSFSFPKFAPNQPYLINQGDALVTSTGVLQLTNVVNGVPSSKSLGRALYAAPFQIWDSTTGNVASFVTSFTFIIQAPN   81 (237)
T ss_dssp             EEEEEEESSCCTTCTTEEEEETCEECTTSCEECSCEETTEECSSCEEEEEESSCEECBCTTTCCBCEEEEEEEEECCCSS
T ss_pred             cceEEEcCCCCCCCCCeEEcccEEeccCCeEEecCCcCCCcccCceEEEEeCCCEecccCCCCCccceEEEEEEEEeCCC
Confidence            35799999998  589999999999889999999876     67999999999999999999999999999999999877


Q ss_pred             CCCCCCceEEEEecCCCCCCCCCCccccCCCcccCCCCCCCCceEEEEeecccccccCCCCCCeeeEecCCCCcCCcccC
Q 048419           80 PDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTKFSTRMLAVEFDIIQNTELIDINDNHVGIDISSLISSASEPA  159 (653)
Q Consensus        80 ~~~~gdGlaF~l~~~~~~~~~~~g~~lG~~~~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~~~Hvgid~ns~~s~~~~~~  159 (653)
                      ...+||||||||+|....+. ..|+||||+|..+   ++..+|+|||||||++|.+ +||++||||||+||+.|.++++|
T Consensus        82 ~~~~gdGlAF~l~p~~~~~~-~~g~~LGl~n~~~---~~~~~~~vAVEFDT~~n~~-~Dp~~nHVGIdvNsi~S~~~~~~  156 (237)
T 1fny_A           82 PATTADGLAFFLAPVDTQPL-DLGGMLGIFKDGY---FNKSNQIVAVEFDTFSNGD-WDPKGRHLGINVNSIESIKTVPW  156 (237)
T ss_dssp             TTSCCEEEEEEEEETTCCCC-CCGGGTTTCC------CCTTSCCEEEEEECSCCTT-TCCSSSEEEEEESSSSCSEEEEC
T ss_pred             CCCCCCCEEEEeccCCCCCC-CCCCcccccccCC---CCccccEEEEEeecccCcc-cCCCCCceEEecCCccccccccc
Confidence            77799999999999876554 7889999998753   3668999999999999987 69999999999999999988775


Q ss_pred             ccccCCCCccccccCCCCceEEEEEecCCceEEEEEEeeCCCCCCCCCceeeeecCCcccccceEEeEecccCcc---cc
Q 048419          160 SYYSGNNHRIPILLRSGDPIQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLI---TA  236 (653)
Q Consensus       160 ~~~~~~~~~~~~~l~~g~~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~~l~~~~dL~~~l~~~~~vGFsastg~~---~~  236 (653)
                                  +|.+|+.++|||+||+.+++|+|+|.+.+.  |..|+|++.|||+++||++||||||||||..   .|
T Consensus       157 ------------~l~~G~~~~v~I~Yd~~~~~L~V~l~~~~~--~~~~~ls~~vdL~~~l~e~v~VGFSAsTG~~~~~~~  222 (237)
T 1fny_A          157 ------------NWTNGEVANVFISYEASTKSLTASLVYPSL--ETSFIIDAIVDVKIVLPEWVRFGFSATTGIDKGYVQ  222 (237)
T ss_dssp             ------------CCCTTCCEEEEEEEEGGGTEEEEEEEETTT--TEEEEEEEECCHHHHSCSEEEEEEEEEECSSTTCCC
T ss_pred             ------------cccCCCEEEEEEEEeCCCcEEEEEEecCCC--CCcceEEEEechHHhCCCcEEEEEEEeeCCCCcccc
Confidence                        367999999999999999999999988654  5578999999999999999999999999998   99


Q ss_pred             eeeecceeeeec
Q 048419          237 SHNVHGWSISIG  248 (653)
Q Consensus       237 ~~~i~sWsf~~~  248 (653)
                      .|+|++|+|++.
T Consensus       223 ~h~IlsWsF~s~  234 (237)
T 1fny_A          223 TNDVLSWSFESN  234 (237)
T ss_dssp             CCEEEEEEEEEE
T ss_pred             eeEEEEEEEEEe
Confidence            999999999864

>1fx5_A UEA-I, UE-I, anti-H(O) lectin I; legume lectin, HOMO-dimer, fucose specific lectin, SUG binding protein; HET: NAG FUC BMA MAN; 2.20A {Ulex europaeus} SCOP: b.29.1.1 PDB: 1jxn_A*

Probab=100.00  E-value=6.4e-60  Score=465.31  Aligned_cols=223  Identities=27%  Similarity=0.385  Sum_probs=202.8

Q ss_pred             CceeEEeCCCC--CCCeEEecceEecCCCcEEecCCC---CCceEE-EEcCCCeecccCCCCceeeeEEEEEEEEecC-C
Q 048419            7 DTTSFLYNGFL--HANLSLEGAAYISTSGILTVTNKS---EGLIGH-ALYPNPLRFKTSNKSVAIDFRTNFVFSILPK-Y   79 (653)
Q Consensus         7 ~~~~f~~~~f~--~~~l~~~g~a~~~~~g~l~Lt~~~---~~~~Gr-~~y~~pi~~~~~~~~~~~sF~t~F~f~i~~~-~   79 (653)
                      .+++|+|+.|.  ..+|+|+|||++.++|.|+||++.   .+++|| |+|++||+||++.+++++||+|+|+|.|.+. +
T Consensus         2 ~~~~F~f~~F~~~~~~l~l~G~A~v~~~g~l~LT~~~~~~~~~~Gr~a~y~~Pv~l~~~~tg~vaSFsT~F~F~I~~~~~   81 (242)
T 1fx5_A            2 DDLSFKFKNFSQNGKDLSFQGNASVIETGVLQLNKVGNNLPDETGGIARYIAPIHIWNCNTGELASFITSFSFFMETSAN   81 (242)
T ss_dssp             CEEEEEESSCCTTCSSEEEEETCEECTTSCEESCCCSSSSCSEEEEEEEESSCEECEETTTTEECEEEEEEEEEEEESSC
T ss_pred             cceEEEcCCCCCCCCCeEEcccEEeccCCcEEecCCCCcccCCccCEEEeCCCEEeecCCCCCccceEEEEEEEEecCCC
Confidence            56899999998  689999999999888999999886   689999 9999999999999999999999999999887 5


Q ss_pred             CCCCCCceEEEEecCCCCCCCCCCccccCCCcccCCCCCCCCceEEEEeeccccccc-CCCCCCeeeEecCCCCcCCccc
Q 048419           80 PDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTKFSTRMLAVEFDIIQNTEL-IDINDNHVGIDISSLISSASEP  158 (653)
Q Consensus        80 ~~~~gdGlaF~l~~~~~~~~~~~g~~lG~~~~~~~~~~~~~~~~vaVEFDt~~n~~~-~d~~~~Hvgid~ns~~s~~~~~  158 (653)
                      ...+||||||||+|....+. ..|+||||+|.++   ++..+|+|||||||++|.++ |||++||||||+||+.|.++++
T Consensus        82 ~~~~gdGlAF~l~p~~~~~~-~~g~~LGl~n~~~---~~~~n~~vAVEFDT~~N~~~~~Dp~~nHVGIdvNs~~S~~~~~  157 (242)
T 1fx5_A           82 PKAATDGLTFFLAPPDSPLR-RAGGYFGLFNDTK---CDSSYQTVAVEFDTIGSPVNFWDPGFPHIGIDVNCVKSINAER  157 (242)
T ss_dssp             GGGCCCEEEEEEECTTCCCC-BCGGGTTTBSSSC---CCGGGCCEEEEEECCCTTTSTTSCSSCEEEEEESSSSCSEEEE
T ss_pred             CCCCCCcEEEEEecCCCCCC-CCCCcccccccCC---CCccCcEEEEEeccccCcccccCCCCCeEEEecCCccccceec
Confidence            66789999999999876554 7889999998653   35688999999999999987 8999999999999999998876


Q ss_pred             CccccCCCCccccccCCC--CceEEEEEecCCceEEEEEEeeCCCCCCCCCceeeeecCCcccccceEEeEeccc--Ccc
Q 048419          159 ASYYSGNNHRIPILLRSG--DPIQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSAST--GLI  234 (653)
Q Consensus       159 ~~~~~~~~~~~~~~l~~g--~~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~~l~~~~dL~~~l~~~~~vGFsast--g~~  234 (653)
                      |            +|.+|  +.++|||+||+.+++|+|+|.+.+.  |..|+|++.+||+++||++|||||||+|  |..
T Consensus       158 ~------------~l~~G~~~~~~v~I~Yd~~~~~L~V~l~~~~~--~~~~~ls~~vdL~~~l~e~v~VGFSAsT~~G~~  223 (242)
T 1fx5_A          158 W------------NKRYGLNNVANVEIIYEASSKTLTASLTYPSD--QTSISVTSIVDLKEILPEWVSVGFSGSTYIGRQ  223 (242)
T ss_dssp             C------------CCCCSGGGCEEEEEEEETTTTEEEEEEEETTT--TEEEEEEEECCGGGTSCSEEEEEEEEEEETTSC
T ss_pred             c------------cccCCCceeEEEEEEEeCCCCEEEEEEecCCC--CccceeeEEechHHhCCccEEEEEEecccCCCc
Confidence            5            36789  9999999999999999999988754  5568999999999999999999999999  988


Q ss_pred             cceeeecceeeeec
Q 048419          235 TASHNVHGWSISIG  248 (653)
Q Consensus       235 ~~~~~i~sWsf~~~  248 (653)
                       |.|+|++|+|++.
T Consensus       224 -~~h~IlsWsF~s~  236 (242)
T 1fx5_A          224 -ATHEVLNWYFTST  236 (242)
T ss_dssp             -EEEEEEEEEEEEE
T ss_pred             -ceeEEEEEEeEee
Confidence             9999999999875

>1v6i_A Agglutinin, PNA, galactose-binding lectin; open quaternary association, orthorhombic, carbohydrate specificity, protein crystallography; HET: GAL GLC; 2.15A {Arachis hypogaea} SCOP: b.29.1.1 PDB: 1bzw_A* 1v6j_A* 1v6k_A* 1v6l_A* 1v6m_A 1v6n_A 1v6o_A 2dva_A* 1cq9_A 1ciw_A* 1qf3_A* 1rir_A* 1rit_A* 2dh1_A 1cr7_A* 2dv9_A* 2dvb_A* 2dvd_A* 2dvf_A 2dvg_A* ...

Probab=100.00  E-value=5.7e-60  Score=462.68  Aligned_cols=220  Identities=26%  Similarity=0.377  Sum_probs=201.4

Q ss_pred             CceeEEeCCCC--CCCeEEecceEecCCCcEEecCC-CCCceEEEEcCCCeecccCCCCceeeeEEEEEEEEecCCCCCC
Q 048419            7 DTTSFLYNGFL--HANLSLEGAAYISTSGILTVTNK-SEGLIGHALYPNPLRFKTSNKSVAIDFRTNFVFSILPKYPDLG   83 (653)
Q Consensus         7 ~~~~f~~~~f~--~~~l~~~g~a~~~~~g~l~Lt~~-~~~~~Gr~~y~~pi~~~~~~~~~~~sF~t~F~f~i~~~~~~~~   83 (653)
                      .+++|+|+.|.  ..||+|+|||++.++|.|+||++ ..+++|||+|++||+||++.+++++||+|+|+|.|.+.+...+
T Consensus         2 ~~~~F~f~~F~~~~~~l~l~G~A~v~~~g~l~LT~~~~~~~~Gra~y~~Pi~l~~~~tg~vaSFsT~F~F~I~~~~~~~~   81 (232)
T 1v6i_A            2 ETVSFNFNSFSEGNPAINFQGDVTVLSNGNIQLTNLNKVNSVGRVLYAMPVRIWSSATGNVASFLTSFSFEMKDIKDYDP   81 (232)
T ss_dssp             EEEEEEESSCCTTCTTEEEEESCEECTTSCEECSCTTSTTCEEEEEESSCEECBCTTTCCBCEEEEEEEEEEECCSSSBC
T ss_pred             cceEEEcCCCCCCCCCeEEcccEEEccCCcEEeCCCCCCCceEEEEeCCCEEeecCCCCCccceEEEEEEEEecCCCCCC
Confidence            46799999998  68999999999988899999998 8889999999999999999999999999999999998776778


Q ss_pred             CCceEEEEecCCC-CCCCC-CCccccCCCcccCCCCCCCCceEEEEeecccccccCCCCCCeeeEecCCCCcCCcccCcc
Q 048419           84 GQGLAFIIISTNR-PENCL-ANQFLGLPNITMSSSTKFSTRMLAVEFDIIQNTELIDINDNHVGIDISSLISSASEPASY  161 (653)
Q Consensus        84 gdGlaF~l~~~~~-~~~~~-~g~~lG~~~~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~~~Hvgid~ns~~s~~~~~~~~  161 (653)
                      ||||||||+|... .|.++ +|+||||+|.      +..+|+|||||||++|.+++||++||||||+||+.|.++++|  
T Consensus        82 gdGlAF~l~p~~~~~p~~~~~g~~LGl~n~------~~~~~~vAVEFDT~~n~~~~Dp~~nHVGIdvns~~S~~~~~~--  153 (232)
T 1v6i_A           82 ADGIIFFIAPEDTQIPAGSIGGGTLGVSDT------KGAGHFVGVEFDTYSNSEYNDPPTDHVGIDVNSVDSVKTVPW--  153 (232)
T ss_dssp             CCEEEEEEEETTCCCCTTCCCGGGTTTSCT------TSEEEEEEEEEECSCCGGGTCCSSCEEEEEEEESSCSEEEEC--
T ss_pred             CCCEEEEEecCCCCCCCCcCCCcccccccC------CCcccEEEEEeecccccccCCCCCCeEEEEcCCccccccccc--
Confidence            9999999999873 46667 8999999975      346899999999999999899999999999999999988775  


Q ss_pred             ccCCCCccccccCCCCceEEEEEecCCceEEEEEEeeCCCCCCCCCceeeeecCCcccccceEEeEecccCc--ccceee
Q 048419          162 YSGNNHRIPILLRSGDPIQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGL--ITASHN  239 (653)
Q Consensus       162 ~~~~~~~~~~~l~~g~~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~~l~~~~dL~~~l~~~~~vGFsastg~--~~~~~~  239 (653)
                                +|.+|+.++|||+||+.+++|+|+|.+ +  +|..|+|++.|||+++||++|||||| |||.  ..|.|+
T Consensus       154 ----------~l~~G~~~~v~I~Yd~~~~~L~V~l~~-~--~~~~~~ls~~vdL~~~l~e~v~VGFS-sTG~~~~~~~h~  219 (232)
T 1v6i_A          154 ----------NSVSGAVVKVTVIYDSSTKTLSVAVTN-D--NGDITTIAQVVDLKAKLPERVKFGFS-ASGSLGGRQIHL  219 (232)
T ss_dssp             ----------CCCTTCEEEEEEEEETTTTEEEEEEEC-T--TSCEEEEEEECCHHHHSCSEEEEEEE-EECCSSBCCEEE
T ss_pred             ----------cccCCCEEEEEEEEeCCCcEEEEEEec-C--CCCcceEEEEechHHhCCccEEEEEE-ecCCCccccEEE
Confidence                      377999999999999999999999998 4  46678999999999999999999999 9998  689999


Q ss_pred             ecceeeeec
Q 048419          240 VHGWSISIG  248 (653)
Q Consensus       240 i~sWsf~~~  248 (653)
                      |++|+|++.
T Consensus       220 IlsWsF~s~  228 (232)
T 1v6i_A          220 IRSWSFTST  228 (232)
T ss_dssp             EEEEEEEEE
T ss_pred             EEEEEEEee
Confidence            999999875

>1hql_A Lectin; xenograft antigen, sugar BI protein; HET: GLA MBG NAG; 2.20A {Griffonia simplicifolia} SCOP: b.29.1.1 PDB: 1gnz_A*

Probab=100.00  E-value=1.1e-59  Score=467.89  Aligned_cols=243  Identities=23%  Similarity=0.368  Sum_probs=203.2

Q ss_pred             cCceeEEeCCCC---CCCeEEecceEecCCCcEEecCCC------CCceEEEEcCCCeecccCCCCceeeeEEEEEEEEe
Q 048419            6 ADTTSFLYNGFL---HANLSLEGAAYISTSGILTVTNKS------EGLIGHALYPNPLRFKTSNKSVAIDFRTNFVFSIL   76 (653)
Q Consensus         6 ~~~~~f~~~~f~---~~~l~~~g~a~~~~~g~l~Lt~~~------~~~~Gr~~y~~pi~~~~~~~~~~~sF~t~F~f~i~   76 (653)
                      +..++|+|+.|.   ..||+|+|||.+. +|.|+||+..      .+++|||+|++||+||++.+|+++||+|+|+|.|.
T Consensus         2 ~~~~~F~f~~F~~~~~~~l~l~GdA~v~-~g~l~LT~~~~~~~~~~~~~Gra~y~~Pv~l~d~~tg~vasFsT~F~F~I~   80 (257)
T 1hql_A            2 SDSVSFTFPNFWSDVEDSIIFQGDANTT-AGTLQLCKTNQYGTPLQWSAGRALYSDPVQLWDNKTESVASFYTEFTFFLK   80 (257)
T ss_dssp             --CCEEEESCSCSCGGGTEEEEETCEEE-TTEEECSCBCTTSCBCSSCEEEEEESSCEECCCSTTCCCCEEEEEEEEEEE
T ss_pred             CcceEEEcCCCCCCCCCCEEEccceEec-CCcEEecCCccCCcccCCCeEEEEECCCEecccCCCCCeeceEEEEEEEEe
Confidence            356899999998   5799999999998 9999999875      57999999999999999999999999999999998


Q ss_pred             cCCCCCCCCceEEEEecCCCCCCCCCCccccCCCcccCCCCCCCCceEEEEeecccccccCCCCCCeeeEecCCCCcCCc
Q 048419           77 PKYPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTKFSTRMLAVEFDIIQNTELIDINDNHVGIDISSLISSAS  156 (653)
Q Consensus        77 ~~~~~~~gdGlaF~l~~~~~~~~~~~g~~lG~~~~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~~~Hvgid~ns~~s~~~  156 (653)
                      +. ...+||||||||+|....+. +.|+||||++.++. .++..+|+|||||||++|.+|.||++||||||+||+.|.++
T Consensus        81 ~~-~~~~gdGlAF~l~p~~~~~~-~~g~~LGl~n~~~~-~~~~~n~~vAVEFDT~~N~~~~Dp~~nHVGIdvNs~~S~~s  157 (257)
T 1hql_A           81 IT-GNGPADGLAFFLAPPDSDVK-DAGEYLGLFNKSTA-TQPSKNQVVAVEFDTWTNPNFPEPSYRHIGINVNSIVSVAT  157 (257)
T ss_dssp             EC-SSCCCCEEEEEEECTTCCCC-CCGGGTTTSCTTTT-TCGGGCCCEEEEEECSCCSSSCCCSSCEEEEEESSSSCSEE
T ss_pred             cC-CCCCCCcEEEEEecCCCCCC-CCCccccccccccc-cCCccCceEEEEecccccccccCCCCCceeeeeCCccccce
Confidence            87 66789999999999876544 78899999987542 25677899999999999998889999999999999999998


Q ss_pred             ccCccccCCCCccccccCCCCceEEEEEecCCceEEEEEEeeCCCCCCCCCceeeeecCCcccccceEEeEecccC-ccc
Q 048419          157 EPASYYSGNNHRIPILLRSGDPIQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTG-LIT  235 (653)
Q Consensus       157 ~~~~~~~~~~~~~~~~l~~g~~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~~l~~~~dL~~~l~~~~~vGFsastg-~~~  235 (653)
                      ++|..         -+|.+|+.++|||+|++.+++|+|+|.+.+.   ..|+|++.+||+.+||++|||||||||| ...
T Consensus       158 ~~~~~---------~~l~~g~~~~v~I~Yd~~~~~L~V~l~~~~~---~~~~ls~~vdL~~~l~e~~~vGFSAsTG~~~~  225 (257)
T 1hql_A          158 KRWED---------SDIFSGKIATARISYDGSAEILTVVLSYPDG---SDYILSHSVDMRQNLPESVRVGISASTGNNQF  225 (257)
T ss_dssp             EECCH---------HHHTSCSCEEEEEEEETTTTEEEEEEEETTT---EEEEEEEECCGGGTSCSEEEEEEEEECCSCCC
T ss_pred             eccCc---------ccccCCceEEEEEEEeCCCCEEEEEEecCCC---CceeeEEeechHHhcCCceEEEEEeccCCCcc
Confidence            87631         1366799999999999999999999988654   4589999999999999999999999999 899


Q ss_pred             ceeeecceeeeecCcCCCCCCCCCCCccc
Q 048419          236 ASHNVHGWSISIGGKAQDLNPMKVPTLEK  264 (653)
Q Consensus       236 ~~~~i~sWsf~~~~~~~~l~p~~~p~~~~  264 (653)
                      |.|+|++|+|++...++..+.+.+|..|+
T Consensus       226 ~~H~IlsWsF~s~~~~~~~~~~~~p~~~~  254 (257)
T 1hql_A          226 LTVYILSWRFSSNLQSTSVKAAMEPEITR  254 (257)
T ss_dssp             EEEEEEEEEEEEEC---------------
T ss_pred             ceeEEEEEEeEecCCCCCcccccCCCCCc
Confidence            99999999999987777777777777664

>1gzc_A Erythrina crista-galli lectin; carbohydrate, sugar binding protein, saccharide, protein-carbohydrate interactions, lactose, glycoprotein; HET: LAT; 1.58A {Erythrina crista-galli} SCOP: b.29.1.1 PDB: 1gz9_A* 1fyu_A* 1ax0_A* 1ax1_A* 1ax2_A* 1axy_A* 1axz_A* 1lte_A* 1sfy_A* 1v00_A* 1uzz_A 1uzy_A* 3n35_A* 3n36_A* 3n3h_A*

Probab=100.00  E-value=9.7e-60  Score=463.74  Aligned_cols=223  Identities=29%  Similarity=0.455  Sum_probs=200.9

Q ss_pred             CceeEEeCCCC--CCCeEEecceEecCCCcEEecCCC------CCceEEEEcCCCeecccCCCCceeeeEEEEEEEEecC
Q 048419            7 DTTSFLYNGFL--HANLSLEGAAYISTSGILTVTNKS------EGLIGHALYPNPLRFKTSNKSVAIDFRTNFVFSILPK   78 (653)
Q Consensus         7 ~~~~f~~~~f~--~~~l~~~g~a~~~~~g~l~Lt~~~------~~~~Gr~~y~~pi~~~~~~~~~~~sF~t~F~f~i~~~   78 (653)
                      .+++|+|+.|.  ..||+|+|||++.++|.|+||+..      ..++|||+|++||+||++.+++++||+|+|+|.|.+.
T Consensus         2 ~~~~F~f~~F~~~~~~l~l~G~A~v~~~g~l~LT~~~~~~~~~~~~~Gra~y~~Pi~l~~~~tg~vaSFsT~F~F~I~~~   81 (239)
T 1gzc_A            2 ETISFSFSEFEPGNDNLTLQGAALITQSGVLQLTKINQNGMPAWDSTGRTLYTKPVHMWDSTTGTVASFETRFSFSIEQP   81 (239)
T ss_dssp             EEEEEEESSCCTTCTTEEEEETCEECTTSCEESSCBCTTSCBCSSCEEEEEESSCEECBCTTTCCBCEEEEEEEEECCCC
T ss_pred             eeEEEEeCCCCCCCCCeEEcccEEEcCCCcEEeCCCCcCCcccCCceEEEEeCCCEecccCCCCCccceEEEEEEEEeCC
Confidence            45799999998  689999999999888999999876      5799999999999999999999999999999999887


Q ss_pred             C-CCCCCCceEEEEecCCCCCCCCCCccccCCCcccCCCCCCCCceEEEEeecccccccCCCCCCeeeEecCCCCcCCcc
Q 048419           79 Y-PDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTKFSTRMLAVEFDIIQNTELIDINDNHVGIDISSLISSASE  157 (653)
Q Consensus        79 ~-~~~~gdGlaF~l~~~~~~~~~~~g~~lG~~~~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~~~Hvgid~ns~~s~~~~  157 (653)
                      + ...+||||||||+|....+. ..|+||||+|..+   ++..+|+|||||||++|. |.||++||||||+||+.|.+++
T Consensus        82 ~~~~~~gdGlAF~l~p~~~~~~-~~g~~LGl~n~~~---~~~~~~~vAVEFDT~~n~-~dDp~~nHVGIdvns~~S~~~~  156 (239)
T 1gzc_A           82 YTRPLPADGLVFFMGPTKSKPA-QGYGYLGVFNNSK---QDNSYQTLAVEFDTFSNP-WDPPQVPHIGIDVNSIRSIKTQ  156 (239)
T ss_dssp             CSSSCCCEEEEEEEECSSCCCC-CCGGGTTTCSSSS---CCGGGCCEEEEEECSCCT-TSCSSSSEEEEEESSSSCSEEE
T ss_pred             CCCCCCCCcEEEEEecCCCCCC-CCCCcccccccCC---CCccccEEEEEEeccccc-CCCCCCCeEEEecCCccccccc
Confidence            5 66789999999999876554 7889999998653   456799999999999998 7779999999999999999887


Q ss_pred             cCccccCCCCccccccCCCCceEEEEEecCCceEEEEEEeeCCCCCCCCCceeeeecCCcccccceEEeEecccCc---c
Q 048419          158 PASYYSGNNHRIPILLRSGDPIQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGL---I  234 (653)
Q Consensus       158 ~~~~~~~~~~~~~~~l~~g~~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~~l~~~~dL~~~l~~~~~vGFsastg~---~  234 (653)
                      +|            +|.+|+.++|||+||+.+++|+|+|.+.+.  |..|+|++.+||+++||++||||||||||.   .
T Consensus       157 ~~------------~l~~G~~~~v~I~Yd~~~~~L~V~l~~~~~--~~~~~ls~~vdL~~~l~e~v~VGFSAsTG~~~~~  222 (239)
T 1gzc_A          157 PF------------QLDNGQVANVVIKYDAPSKILHVVLVYPSS--GAIYTIAEIVDVKQVLPDWVDVGLSGATGAQRDA  222 (239)
T ss_dssp             EC------------CCCTTCEEEEEEEEETTTTEEEEEEECTTT--CCEEEEEEECCHHHHSCSEEEEEEEEEECSSTTC
T ss_pred             cc------------cccCCCEEEEEEEEeCCCcEEEEEEecCCC--CccceEEEEechHHhCCCceEEEEEeccCCCccc
Confidence            64            377999999999999999999999987654  567899999999999999999999999997   4


Q ss_pred             cceeeecceeeeec
Q 048419          235 TASHNVHGWSISIG  248 (653)
Q Consensus       235 ~~~~~i~sWsf~~~  248 (653)
                      .|.|+|++|+|++.
T Consensus       223 ~~~h~IlsWsF~s~  236 (239)
T 1gzc_A          223 AETHDVYSWSFQAS  236 (239)
T ss_dssp             CCCCEEEEEEEEEE
T ss_pred             cceEEEEEEEeEEe
Confidence            89999999999864

>1qnw_A Chitin binding lectin, UEA-II; carbohydrate binding; HET: NAG; 2.35A {Ulex europaeus} SCOP: b.29.1.1 PDB: 1dzq_A* 1qoo_A* 1qos_A* 1qot_A*

Probab=100.00  E-value=3.4e-59  Score=460.14  Aligned_cols=224  Identities=28%  Similarity=0.444  Sum_probs=203.5

Q ss_pred             ccCceeEEeCCCC--CCCeEEecceEecCCCcEEecCCC---CCceEEEEcCCCeecccCCCCceeeeEEEEEEEEecCC
Q 048419            5 HADTTSFLYNGFL--HANLSLEGAAYISTSGILTVTNKS---EGLIGHALYPNPLRFKTSNKSVAIDFRTNFVFSILPKY   79 (653)
Q Consensus         5 ~~~~~~f~~~~f~--~~~l~~~g~a~~~~~g~l~Lt~~~---~~~~Gr~~y~~pi~~~~~~~~~~~sF~t~F~f~i~~~~   79 (653)
                      ++..++|+|+.|.  ..||+|+|||.+.++|.|+||++.   .+++|||+|++||+||++.+++++||+|+|+|.|.+. 
T Consensus         2 s~~~~~F~f~~F~~~~~~l~l~G~A~i~~~g~l~LT~~~~~~~~~~Gra~y~~Pv~l~~~~tg~vasFsT~F~F~I~~~-   80 (242)
T 1qnw_A            2 LSDDLSFNFDKFVPNQKNIIFQGDASVSTTGVLQVTKVSKPTTTSIGRALYAAPIQIWDSITGKVASFATSFSFVVKAD-   80 (242)
T ss_dssp             -CCSEEEEESSCCTTCTTEEEEETCEECTTSCEESSCCC--CCCEEEEEEESSCEECBCTTTCCBCEEEEEEEEECCBS-
T ss_pred             CccceEEEcCCCCCCCCCeEEccceEEccCCcEEecCCCCcccCCeEEEEeCCCEeeecCCCCCcccEEEEEEEEEecC-
Confidence            4678999999998  689999999999889999999987   7899999999999999999999999999999999887 


Q ss_pred             CCCCCCceEEEEecCCC-CCCCCCCccccCCCcccCCCCCCCCceEEEEeecc----cccccCCCCCCeeeEecCCCCcC
Q 048419           80 PDLGGQGLAFIIISTNR-PENCLANQFLGLPNITMSSSTKFSTRMLAVEFDII----QNTELIDINDNHVGIDISSLISS  154 (653)
Q Consensus        80 ~~~~gdGlaF~l~~~~~-~~~~~~g~~lG~~~~~~~~~~~~~~~~vaVEFDt~----~n~~~~d~~~~Hvgid~ns~~s~  154 (653)
                      ...+||||||||+|... .|.++.|+||||+|..+   ++..+|+|||||||+    +|.  +||++||||||+||+.|.
T Consensus        81 ~~~~gdGlAF~l~p~~~~~p~~~~g~~LGl~n~~~---~~~~~~~vAVEFDT~~~~~~N~--~Dp~~nHVGIdvNs~~S~  155 (242)
T 1qnw_A           81 KSDGVDGLAFFLAPANSQIPSGSSAGMFGLFSSSD---SKSSNQIIAVEFDTYFGKAYNP--WDPDFKHIGIDVNSIKSI  155 (242)
T ss_dssp             SSCCCCEEEEEEEETTCCCCTTCCGGGTTTCSSSS---CCTTSCCEEEEEECCCCTTTCT--TSCSSCEEEEEESSSSCS
T ss_pred             CCCCCCCEEEEEecCCCCCCcCCCCCcccccccCC---CCccccEEEEEeecccccccCC--CCCCCCcEEEecCCcccc
Confidence            66789999999999874 57778899999998653   356789999999999    887  799999999999999999


Q ss_pred             CcccCccccCCCCccccccCCCCceEEEEEecCCceEEEEEEeeCCCCCCCCCceeeeecCCcccccceEEeEecccCcc
Q 048419          155 ASEPASYYSGNNHRIPILLRSGDPIQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLI  234 (653)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~l~~g~~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~~l~~~~dL~~~l~~~~~vGFsastg~~  234 (653)
                      ++++|            +|.+|+.++|||+||+.+++|+|+|.+.+.  |..|+|++.+||+++||++|||||||+||..
T Consensus       156 ~~~~~------------~l~~G~~~~v~I~Yd~~~~~L~V~l~~~~~--~~~~~ls~~vdL~~~l~e~v~VGFSAsTG~~  221 (242)
T 1qnw_A          156 KTVKW------------DWRNGEVADVVITYRAPTKSLTVCLSYPSD--GTSNIITASVDLKAILPEWVSVGFSGGVGNA  221 (242)
T ss_dssp             EEEEC------------CCCTTCCEEEEEEEEGGGTEEEEEEECTTT--CCEEEEEEECCHHHHSCSEEEEEEEEEESCG
T ss_pred             ceecc------------cccCCCEEEEEEEEeCCCcEEEEEEecCCC--CcceeEEEeechHHhcCCceEEEEEeccCCC
Confidence            88765            367999999999999999999999987654  5678999999999999999999999999998


Q ss_pred             --cceeeecceeeeec
Q 048419          235 --TASHNVHGWSISIG  248 (653)
Q Consensus       235 --~~~~~i~sWsf~~~  248 (653)
                        .|.|+|++|+|++.
T Consensus       222 ~~~~~h~IlsWsF~s~  237 (242)
T 1qnw_A          222 AEFETHDVLSWYFTSN  237 (242)
T ss_dssp             GGCBCCEEEEEEEEEE
T ss_pred             ccceEEEEEEEEeEee
Confidence              99999999999875

>2eig_A Lectin; L-fucosyl, N-acetyl-D-glucosamine, SUG binding protein; HET: NAG; 2.00A {Lotus tetragonolobus}

Probab=100.00  E-value=5.9e-59  Score=455.53  Aligned_cols=217  Identities=27%  Similarity=0.369  Sum_probs=199.2

Q ss_pred             eeEEeCCCC-CCCeEEecceEecCCCcEEecCC--CCCceEEEEcCCCeecccCCCCceeeeEEEEEEEEecCCCCCCCC
Q 048419            9 TSFLYNGFL-HANLSLEGAAYISTSGILTVTNK--SEGLIGHALYPNPLRFKTSNKSVAIDFRTNFVFSILPKYPDLGGQ   85 (653)
Q Consensus         9 ~~f~~~~f~-~~~l~~~g~a~~~~~g~l~Lt~~--~~~~~Gr~~y~~pi~~~~~~~~~~~sF~t~F~f~i~~~~~~~~gd   85 (653)
                      ++|+|+.|. ..||+|+|||++.++|.|+||++  ..+++|||+|++||+||++.+++++||+|+|+|.|.+.+...+||
T Consensus         1 ~sF~f~~F~~~~~l~l~G~A~v~~~g~l~LT~~~~~~~~~Gra~y~~Pv~l~~~~tg~vaSFsT~F~F~I~~~~~~~~gd   80 (234)
T 2eig_A            1 VSFNYTRFKDDGSLIFQGDAKIWTDGRLAMPTDPLVNRTTSHALYATPVPIWDSATGNVASFITSFSFIVSNVQRYPPTD   80 (234)
T ss_dssp             CEEEESSCCSSSSEEEEETCEEEGGGEEESSSCGGGSSEEEEEEESSCEECBCTTTCCBCEEEEEEEEEEEECTTSCCCC
T ss_pred             CeEEcCCCCCCCCeEEcccEEEcCCCCeeeCCCCCccCceEEEEeCCCEEeecCCCCCccceEEEEEEEEeCCCCCCCCC
Confidence            489999998 78999999999987899999998  778999999999999999999999999999999999877777999


Q ss_pred             ceEEEEecCCC-CCCCCCCccccCCCcccCCCCCCCCceEEEEeecccccccCCCCC---CeeeEecCCCCcCCcccCcc
Q 048419           86 GLAFIIISTNR-PENCLANQFLGLPNITMSSSTKFSTRMLAVEFDIIQNTELIDIND---NHVGIDISSLISSASEPASY  161 (653)
Q Consensus        86 GlaF~l~~~~~-~~~~~~g~~lG~~~~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~~---~Hvgid~ns~~s~~~~~~~~  161 (653)
                      ||||||+|... .|.+..|+||||+|.+     +..+|+|||||||++|.  +||++   ||||||+||+.|.++++|  
T Consensus        81 GlAF~l~p~~~~~p~~~~g~~LGl~n~~-----~~~~~~vAVEFDT~~N~--~Dp~~~~~nHVGIdvNsi~S~~~~~~--  151 (234)
T 2eig_A           81 GVVFFLAPWGTEIPPNSQGGYLGITDSS-----NSQNQFVAVEFDSHPNV--WDPKSLRSSHIGIDVNSIMSLKAVNW--  151 (234)
T ss_dssp             EEEEEEEETTCCCCTTCCGGGTTTCCTT-----CSCCCCEEEEEECSCCT--TSCTTTCSSEEEEEESSSSCSEEEEC--
T ss_pred             cEEEEEecCCCCCCcCCCCCccccccCC-----CccccEEEEEeccccCc--cCCCCCCCCceEEecCCccccceecc--
Confidence            99999999874 5677889999999864     45689999999999998  79999   999999999999988765  


Q ss_pred             ccCCCCccccccCCCCceEEEEEecCCceEEEEEEeeCCCCCCCCCceeeeecCCcccccceEEeEeccc--Ccccceee
Q 048419          162 YSGNNHRIPILLRSGDPIQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSAST--GLITASHN  239 (653)
Q Consensus       162 ~~~~~~~~~~~l~~g~~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~~l~~~~dL~~~l~~~~~vGFsast--g~~~~~~~  239 (653)
                                +|.+|+.++|||+||+.+++|+|+|.+ +  .|..|+|++.+||+++||++|||||||+|  |.. |.|+
T Consensus       152 ----------~l~~g~~~~v~I~Yd~~~~~L~V~l~~-~--~~~~~~ls~~vdL~~~l~e~v~VGFSAsT~~G~~-~~h~  217 (234)
T 2eig_A          152 ----------NRVSGSLEKATIIYDSDTKILTVVMTH-Q--NGQITTISQEIDLKTVLPEKVSVGFSATTWNPER-ERHD  217 (234)
T ss_dssp             ----------CCCTTCCEEEEEEEETTTTEEEEEEEE-T--TSCEEEEEEECCHHHHSCSEEEEEEEEEECSSCC-EEEE
T ss_pred             ----------cccCCCEEEEEEEEeCCCcEEEEEEec-C--CCCcceEeEeechHHhcCCceEEEEEeeecCCCc-ceeE
Confidence                      367999999999999999999999998 4  36678999999999999999999999999  988 9999


Q ss_pred             ecceeeeec
Q 048419          240 VHGWSISIG  248 (653)
Q Consensus       240 i~sWsf~~~  248 (653)
                      |++|+|++.
T Consensus       218 IlsWsF~s~  226 (234)
T 2eig_A          218 IYSWSFTST  226 (234)
T ss_dssp             EEEEEEEEE
T ss_pred             EEEEEEEec
Confidence            999999875

>1sbf_A Soybean agglutinin; lectin; HET: NAG GAL; 2.43A {Glycine max} SCOP: b.29.1.1 PDB: 1sbd_A* 1sbe_A* 1g9f_A* 2sba_A*

Probab=100.00  E-value=7.1e-59  Score=460.29  Aligned_cols=220  Identities=27%  Similarity=0.457  Sum_probs=200.3

Q ss_pred             CceeEEeCCCC--CCCeEEecceEecCCCcEEecCCC------CCceEEEEcCCCeecccCCCCceeeeEEEEEEEEecC
Q 048419            7 DTTSFLYNGFL--HANLSLEGAAYISTSGILTVTNKS------EGLIGHALYPNPLRFKTSNKSVAIDFRTNFVFSILPK   78 (653)
Q Consensus         7 ~~~~f~~~~f~--~~~l~~~g~a~~~~~g~l~Lt~~~------~~~~Gr~~y~~pi~~~~~~~~~~~sF~t~F~f~i~~~   78 (653)
                      .+++|+|+.|.  ..+|+|+|||.+.++|.|+||++.      ..++|||+|++||+||++.+++++||+|+|+|.|.+.
T Consensus         2 ~~~~F~f~~F~~~~~~l~l~GdA~v~~~g~l~LT~~~~~~~~~~~~~Gra~y~~Pv~l~d~~tg~vaSFsT~F~F~I~~~   81 (253)
T 1sbf_A            2 ETVSFSWNKFVPKQPNMILQGDAIVTSSGKLQLNKVDENGTPKPSSLGRALYSTPIHIWDKETGSVASFAASFNFTFYAP   81 (253)
T ss_dssp             EEEEEEESSCCTTCTTEEEEETCEECTTSCEECSCBCTTSCBCTTCEEEEEESSCEECBCTTTCCBCEEEEEEEEEEECS
T ss_pred             cceEEEcCCCCCCCCCeEEcccEEEcCCCeEEeCCCccCCcccCCCeEEEEECCCEecccCCCCcccceEEEEEEEEeCC
Confidence            46799999998  689999999999879999999876      5799999999999999999999999999999999987


Q ss_pred             CCCCCCCceEEEEecCCCCCCCCCCccccCCCcccCCCCCCCCceEEEEeecccccccCCCCCCeeeEecCCCCcCCccc
Q 048419           79 YPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTKFSTRMLAVEFDIIQNTELIDINDNHVGIDISSLISSASEP  158 (653)
Q Consensus        79 ~~~~~gdGlaF~l~~~~~~~~~~~g~~lG~~~~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~~~Hvgid~ns~~s~~~~~  158 (653)
                      +...+||||||||+|....+. +.|+||||+|..     +..+|+|||||||++|.  +||++||||||+||+.|.++++
T Consensus        82 ~~~~~gdGlAF~l~p~~~~~~-~~g~~LGL~n~~-----~~~n~~vAVEFDT~~N~--~Dp~~nHVGIdvNs~~S~~t~~  153 (253)
T 1sbf_A           82 DTKRLADGLAFFLAPIDTKPQ-THAGYLGLFNEN-----ESGDQVVAVEFDTFRNS--WDPPNPHIGINVNSIRSIKTTS  153 (253)
T ss_dssp             STTSCCEEEEEEEEETTCCCC-CCGGGTTTCCTT-----SCCCSCEEEEEECSCCT--TCCSSSEEEEEESSSSCSEEEE
T ss_pred             CCCCCCCcEEEEEecCCCCCC-CCCCccccccCC-----CcccceEEEEeccccCC--CCCCCCcEEEEcCCccccceec
Confidence            777799999999999876554 788999999864     45689999999999998  7999999999999999998876


Q ss_pred             CccccCCCCccccccCCCCceEEEEEecCCceEEEEEEeeCCCCCCCCCceeeeecCCcccccceEEeEecccCcc--cc
Q 048419          159 ASYYSGNNHRIPILLRSGDPIQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLI--TA  236 (653)
Q Consensus       159 ~~~~~~~~~~~~~~l~~g~~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~~l~~~~dL~~~l~~~~~vGFsastg~~--~~  236 (653)
                      |            +|.+|+.++|||+|++.+++|+|+|.+.+.  |..|+|++.+||+.+||++||||||||||..  .|
T Consensus       154 ~------------~l~~G~~~~v~I~Yd~~~~~L~V~l~~~~~--~~~~~ls~~vdL~~~l~e~~~VGFSAsTG~~~~~~  219 (253)
T 1sbf_A          154 W------------DLANNKVAKVLITYDASTSLLVASLVYPSQ--RTSNILSDVVDLKTSLPEWVRIGFSAATGLDIPGE  219 (253)
T ss_dssp             C------------CCCTTCCEEEEEEEETTTTEEEEEEEETTT--TEEEEEEEECCHHHHSCSEEEEEEEEEECSSSCCC
T ss_pred             c------------cccCCCeeEEEEEEeCCCcEEEEEEecCCC--CCcceEEEEechHHhCCCceEEEEEeccCCCccce
Confidence            5            367999999999999999999999988654  5568999999999999999999999999998  99


Q ss_pred             eeeecceeeeec
Q 048419          237 SHNVHGWSISIG  248 (653)
Q Consensus       237 ~~~i~sWsf~~~  248 (653)
                      .|+|++|+|++.
T Consensus       220 ~H~IlsWsF~s~  231 (253)
T 1sbf_A          220 SHDVLSWSFASN  231 (253)
T ss_dssp             EEEEEEEEEEEE
T ss_pred             eeEEEEEEeEee
Confidence            999999999875

>1g7y_A Stem/LEAF lectin DB58; jelly roll fold, sugar binding protein; HET: NAG FUC FUL; 2.50A {Vigna unguiculata subsp} SCOP: b.29.1.1 PDB: 1lul_A 1lu1_A* 1bjq_A* 1lu2_A*

Probab=100.00  E-value=6.5e-59  Score=461.15  Aligned_cols=222  Identities=27%  Similarity=0.456  Sum_probs=202.0

Q ss_pred             CceeEEeCCCCCCCeEEecceEecCCCcEEecCCC------CCceEEEEcCCCeecccCCCCceeeeEEEEEEEEecCCC
Q 048419            7 DTTSFLYNGFLHANLSLEGAAYISTSGILTVTNKS------EGLIGHALYPNPLRFKTSNKSVAIDFRTNFVFSILPKYP   80 (653)
Q Consensus         7 ~~~~f~~~~f~~~~l~~~g~a~~~~~g~l~Lt~~~------~~~~Gr~~y~~pi~~~~~~~~~~~sF~t~F~f~i~~~~~   80 (653)
                      .+++|+|+.|...+|+|+|||.+. +|.|+||++.      .+++|||+|++||+||++.+++++||+|+|+|.|.+.+.
T Consensus         2 ~~~~F~f~~F~~~~l~l~GdA~v~-~g~l~LT~~~~~~~~~~~~~Gra~y~~Pv~l~d~~tg~vaSFsT~F~F~I~~~~~   80 (253)
T 1g7y_A            2 DIQSFSFKNFNSSSFILQGDATVS-SSKLRLTKVKGNGLPTLSSLGRAFYSSPIQIYDKSTGAVASWATSFTANIFAPNK   80 (253)
T ss_dssp             EEEEEEESSCCSSCEEEEETCEEE-TTEEECSCBCTTSCBCSSCEEEEEESSCEECBCTTTCCBCEEEEEEEEECCCSSG
T ss_pred             cceEEEcCCCCcCCEEEecceEEe-CCEEEeCCCCCCCccccCCeEEEEECCCEEeecCCCCCccceEEEEEEEEecCCC
Confidence            468999999998899999999998 9999999876      579999999999999999999999999999999988766


Q ss_pred             CCCCCceEEEEecCCCCCCCCCCccccCCCcccCCCCCCCCceEEEEeecccccccCCCCCCeeeEecCCCCcCCcccCc
Q 048419           81 DLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTKFSTRMLAVEFDIIQNTELIDINDNHVGIDISSLISSASEPAS  160 (653)
Q Consensus        81 ~~~gdGlaF~l~~~~~~~~~~~g~~lG~~~~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~~~Hvgid~ns~~s~~~~~~~  160 (653)
                      ..+||||||||+|....|. +.|+||||++.++   ++..+|+|||||||++|.+ +||++||||||+||+.|.++++| 
T Consensus        81 ~~~gdGlAF~l~p~~~~~~-~~g~~LGl~n~~~---~~~~n~~vAVEFDT~~N~~-~Dp~~nHVGIdvns~~S~~t~~~-  154 (253)
T 1g7y_A           81 SSSADGIAFALVPVGSEPK-SNSGFLGVFDSDV---YDNSAQTVAVEFDTFSNTD-WDPTSRHIGIDVNSIKSIRTASW-  154 (253)
T ss_dssp             GGCCCEEEEEEEETTCCCC-CCGGGTTTCSCSS---CCGGGCCEEEEEECSCCTT-TCCSSCEEEEEESSSSCSEEEEC-
T ss_pred             CCCCCcEEEEEecCCCCCC-CCCCcccccccCC---CCccCceEEEEecceeccC-cCCCCCcEeeccCCccccceecc-
Confidence            6789999999999876554 7889999998753   3568899999999999988 69999999999999999988775 


Q ss_pred             cccCCCCccccccCCCCceEEEEEecCCceEEEEEEeeCCCCCCCCCceeeeecCCcccccceEEeEecccCcc---cce
Q 048419          161 YYSGNNHRIPILLRSGDPIQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLI---TAS  237 (653)
Q Consensus       161 ~~~~~~~~~~~~l~~g~~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~~l~~~~dL~~~l~~~~~vGFsastg~~---~~~  237 (653)
                                 +|.+|+.++|||+|++.+++|+|+|.+.+.  |..|+|++.+||+.+||++||||||||||..   .|.
T Consensus       155 -----------~l~~g~~~~v~I~Yd~~~~~L~V~l~~~~~--~~~~~ls~~vdL~~~l~e~~~VGFSAsTG~~~~~~~~  221 (253)
T 1g7y_A          155 -----------GLANGQNAEILITYNAATSLLVASLVHPSR--RTSYIVSERVDITNELPEYVSIGFSATTGLSEGYTET  221 (253)
T ss_dssp             -----------CCCTTSEEEEEEEEETTTTEEEEEEEETTT--TEEEEEEEECCHHHHSCSEEEEEEEEECCSSSSCCCC
T ss_pred             -----------ccCCCCeEEEEEEEeCCCCEEEEEEecCCC--CCcceEEEEechHHhCCCceEEEEEeCcCCCCcccce
Confidence                       367899999999999999999999988654  5578999999999999999999999999998   899


Q ss_pred             eeecceeeeec
Q 048419          238 HNVHGWSISIG  248 (653)
Q Consensus       238 ~~i~sWsf~~~  248 (653)
                      |+|++|+|++.
T Consensus       222 H~IlsWsF~s~  232 (253)
T 1g7y_A          222 HDVLSWSFASK  232 (253)
T ss_dssp             CEEEEEEEEEE
T ss_pred             eEEEEEEEEee
Confidence            99999999875

>2fmd_A Lectin, agglutinin, BMA; legume lectin, beta sandwich, protein-carbohydrate complex, sugar binding protein; HET: MAN; 1.90A {Bowringia mildbraedii}

Probab=100.00  E-value=2.6e-58  Score=454.90  Aligned_cols=223  Identities=28%  Similarity=0.452  Sum_probs=200.7

Q ss_pred             CceeEEeCCCC--CCCeEEecceEecCCCcEEecCCCC------CceEEEEcCCCeecccCCCCceeeeEEEEEEEEecC
Q 048419            7 DTTSFLYNGFL--HANLSLEGAAYISTSGILTVTNKSE------GLIGHALYPNPLRFKTSNKSVAIDFRTNFVFSILPK   78 (653)
Q Consensus         7 ~~~~f~~~~f~--~~~l~~~g~a~~~~~g~l~Lt~~~~------~~~Gr~~y~~pi~~~~~~~~~~~sF~t~F~f~i~~~   78 (653)
                      .+++|+|+.|.  ..+|+|+|+|.+.++|.|+||++..      +++|||+|++||+||++ +++++||+|+|+|.|.+.
T Consensus         2 ~~~~F~f~~F~~~~~~l~l~G~A~v~~~g~l~LT~~~~~~~~~~~~~G~a~y~~Pv~l~~~-~g~~~sFst~F~F~I~~~   80 (240)
T 2fmd_A            2 NSVCFTFTDFESGQQDLIFQGDASVGSNKALQLTKVDSKGNPQGGSVGRALYTAPIRLWQS-SSLVASFETTFTFSISQG   80 (240)
T ss_dssp             CEEEEEESSCCTTCTTEEEEETCEECTTSCEECSCBCTTSCBCSSCEEEEEESSCEECCCT-TCSEEEEEEEEEEECCBS
T ss_pred             cceEEEcCCCCCCCCCeEEccceEEcCCCCEEeCCCCcCCcccCCCeEEEEECCCEEeeCC-CCCcCcEEEEEEEEEecC
Confidence            56899999998  6799999999998789999999875      79999999999999999 999999999999999987


Q ss_pred             CCCCCCCceEEEEecCCCCCCC-CCCccccCCCcccCCCCCCCCceEEEEeecccccccCCCCCCeeeEecCCCCcCCcc
Q 048419           79 YPDLGGQGLAFIIISTNRPENC-LANQFLGLPNITMSSSTKFSTRMLAVEFDIIQNTELIDINDNHVGIDISSLISSASE  157 (653)
Q Consensus        79 ~~~~~gdGlaF~l~~~~~~~~~-~~g~~lG~~~~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~~~Hvgid~ns~~s~~~~  157 (653)
                       ...+||||||+|+|....|.. +.|+||||++.+++  ++..+|+|||||||++|.+++||++||||||+||+.|.+++
T Consensus        81 -~~~~gdGlAF~l~p~~~~p~~g~~g~~LGl~n~~~~--~~~~n~~vAVEfDT~~N~~~~Dp~~nHvgIdvns~~S~~s~  157 (240)
T 2fmd_A           81 -SSTPADALTFFIASPDTKIPSGSGGRLLGLFGSSNN--AGSDNGVVSVEFDTYPNTDIGDPNYRHIGIDVNSIRSKAAS  157 (240)
T ss_dssp             -SSSCCCEEEEEEECTTCCCCTTCCGGGTTTCSCCC------CCCEEEEEEECSCCGGGTCCSSCEEEEEESSSSCSEEE
T ss_pred             -CCCCCCcEEEEEecCCCCCCccCCCCcccccccCcC--CCCcCcEEEEEeccccccccCCCCCCceeecccccccccee
Confidence             667899999999998766654 78999999987653  56688999999999999988899999999999999998887


Q ss_pred             cCccccCCCCccccccCCCCceEEEEEecCCceEEEEEEeeCCCCCCCCCceeeeecCCcccccceEEeEecccCcccce
Q 048419          158 PASYYSGNNHRIPILLRSGDPIQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLITAS  237 (653)
Q Consensus       158 ~~~~~~~~~~~~~~~l~~g~~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~~l~~~~dL~~~l~~~~~vGFsastg~~~~~  237 (653)
                      +|            ++.+|+.++|||+|++.+++|+|+|.+.+.   ..|+|++.+||+.+||++|||||||+||...|.
T Consensus       158 ~~------------~l~~g~~~~v~I~Yd~~~~~L~V~l~~~~~---~~~~ls~~vdL~~~l~~~~yvGFSAsTG~~~~~  222 (240)
T 2fmd_A          158 KW------------DWQNGKTATAHISYNSASKRLSVVSSYPNS---SPVVVSFDVELNNVBPBWVRVGFSATTGQYTQT  222 (240)
T ss_dssp             EC------------CCCSSCEEEEEEEEETTTTEEEEEEECTTS---CCEEEEEECCGGGTSCSEEEEEEEEECCSSCBC
T ss_pred             EE------------EeeCCCEEEEEEEEeCCCCEEEEEEecCCC---CceEEEEEechHHhCCCceEEEEEeccCCcccc
Confidence            64            367899999999999999999999987654   468999999999999999999999999999999


Q ss_pred             eeecceeeeec
Q 048419          238 HNVHGWSISIG  248 (653)
Q Consensus       238 ~~i~sWsf~~~  248 (653)
                      |+|++|+|++.
T Consensus       223 H~IlsWsF~s~  233 (240)
T 2fmd_A          223 NNILAWSFRSS  233 (240)
T ss_dssp             CEEEEEEEEEE
T ss_pred             EEEEEEEeEec
Confidence            99999999875

>1fat_A Phytohemagglutinin-L; glycoprotein, plant defense protein, lectin; HET: NAG; 2.80A {Phaseolus vulgaris} SCOP: b.29.1.1 PDB: 1g8w_A*

Probab=100.00  E-value=6.2e-59  Score=461.07  Aligned_cols=221  Identities=29%  Similarity=0.446  Sum_probs=201.4

Q ss_pred             CceeEEeCCCCCCCeEEecceEecCCCcEEecCCC------CCceEEEEcCCCeecccCCCCceeeeEEEEEEEEecCCC
Q 048419            7 DTTSFLYNGFLHANLSLEGAAYISTSGILTVTNKS------EGLIGHALYPNPLRFKTSNKSVAIDFRTNFVFSILPKYP   80 (653)
Q Consensus         7 ~~~~f~~~~f~~~~l~~~g~a~~~~~g~l~Lt~~~------~~~~Gr~~y~~pi~~~~~~~~~~~sF~t~F~f~i~~~~~   80 (653)
                      .+++|+|+.|...||+|+|||.+.++|.|+||++.      .+++|||+|++||+|||+.+|+++||+|+|+|.|.+.+.
T Consensus         2 ~~~~F~f~~F~~~~l~l~G~A~v~~~g~l~LT~~~~~~~~~~~~~Gra~y~~Pv~l~d~~tg~vaSFsT~F~F~I~~~~~   81 (252)
T 1fat_A            2 NDIYFNFQRFNETNLILQRDASVSSSGQLRLTNLNGNGEPRVGSLGRAFYSAPIQIWDNTTGTVASFATSFTFNIQVPNN   81 (252)
T ss_dssp             CCEEEEESSCCGGGEEEEETCEECTTSCEECSCCC-CCCCCTTCEEEEEEEEEEECEETTTTEEEEEEEEEEEECCCCSS
T ss_pred             cceEEEcCCCCcCCEEEeccEEECCCCEEEeCCCCCCCccccCCEEEEEECCCEecccCCCCcccceEEEEEEEEeCCCC
Confidence            56899999999889999999999878999999876      579999999999999999999999999999999998766


Q ss_pred             CCCCCceEEEEecCCCCCCCCCCccccCCCcccCCCCCCCCceEEEEeecccccccCCCCCCeeeEecCCCCcCCcccCc
Q 048419           81 DLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTKFSTRMLAVEFDIIQNTELIDINDNHVGIDISSLISSASEPAS  160 (653)
Q Consensus        81 ~~~gdGlaF~l~~~~~~~~~~~g~~lG~~~~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~~~Hvgid~ns~~s~~~~~~~  160 (653)
                      ..+||||||||+|....+. +.|+||||+|..     +..+|+|||||||++|.+ +||++||||||+||+.|.++++| 
T Consensus        82 ~~~gdGlAF~l~p~~~~~~-~~g~~LGl~n~~-----~~~~~~vAVEFDT~~N~~-~Dp~~nHVGIdvNs~~S~~~~~~-  153 (252)
T 1fat_A           82 AGPADGLAFALVPVGSQPK-DKGGFLGLFDGS-----NSNFHTVAVEFDTLYNKD-WDPTERHIGIDVNSIRSIKTTRW-  153 (252)
T ss_dssp             CBCCEEEEEEEEETTCCCC-CSGGGTTTCCSS-----CCCCCCEEEEEECSCCTT-TCCSSCEEEEEESSSSCSEEEEC-
T ss_pred             CCCCCcEEEEEccCCCCCC-CCCccccccccC-----CccCcEEEEEeecccCCC-CCCCCCeEEEecCCccccceecc-
Confidence            7789999999999876554 788999999864     456899999999999988 69999999999999999988765 


Q ss_pred             cccCCCCccccccCCCCceEEEEEecCCceEEEEEEeeCCCCCCCCCceeeeecCCcccccceEEeEecccCcc---cce
Q 048419          161 YYSGNNHRIPILLRSGDPIQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLI---TAS  237 (653)
Q Consensus       161 ~~~~~~~~~~~~l~~g~~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~~l~~~~dL~~~l~~~~~vGFsastg~~---~~~  237 (653)
                                 ++.+|+.++|||+|++.+++|+|+|.+.+.  |..|+|++.+||+.+||++||||||||||..   .|.
T Consensus       154 -----------~l~~G~~~~v~I~Yd~~~~~L~V~l~~~~~--~~~~~ls~~vdL~~~l~e~~~VGFSAsTG~~~~~~~~  220 (252)
T 1fat_A          154 -----------DFVNGENAEVLITYDSSTNLLVASLVYPSQ--KTSFIVSDTVDLKSVLPEWVSVGFSATTGINKGNVET  220 (252)
T ss_dssp             -----------CCCTTCEEEEEEEEETTTTEEEEEEEETTT--TEEEEEEEECCHHHHSCSEEEEEEEEEECSSTTBCCC
T ss_pred             -----------cccCCCEEEEEEEEeCCCCEEEEEEecCCC--CCcceEEEEechHHhCCCceEEEEEeccCCCCcccce
Confidence                       367899999999999999999999988654  5578999999999999999999999999998   899


Q ss_pred             eeecceeeeec
Q 048419          238 HNVHGWSISIG  248 (653)
Q Consensus       238 ~~i~sWsf~~~  248 (653)
                      |+|++|+|++.
T Consensus       221 H~IlsWsF~s~  231 (252)
T 1fat_A          221 NDVLSWSFASK  231 (252)
T ss_dssp             CEEEEEEEEEE
T ss_pred             EEEEEEEEEee
Confidence            99999999875

>2bqp_A Protein (PEA lectin); D-glucopyranose complex, sugar binding protein; HET: GLC; 1.90A {Pisum sativum} SCOP: b.29.1.1

Probab=100.00  E-value=2.4e-58  Score=453.93  Aligned_cols=224  Identities=29%  Similarity=0.442  Sum_probs=202.6

Q ss_pred             CceeEEeCCCC--CCCeEEecceEecCCCcEEecCCCCCceEEEEcCCCeecccCCCCceeeeEEEEEEEEecCCCCCCC
Q 048419            7 DTTSFLYNGFL--HANLSLEGAAYISTSGILTVTNKSEGLIGHALYPNPLRFKTSNKSVAIDFRTNFVFSILPKYPDLGG   84 (653)
Q Consensus         7 ~~~~f~~~~f~--~~~l~~~g~a~~~~~g~l~Lt~~~~~~~Gr~~y~~pi~~~~~~~~~~~sF~t~F~f~i~~~~~~~~g   84 (653)
                      .+++|+|++|.  ..+|+|+|||. .++|.|+||++..+++|||+|++||+|||+.+++++||+|+|+|.|.+.+...+|
T Consensus         2 ~~~~F~f~~F~~~~~~l~l~G~A~-~~~g~l~LT~~~~~~~G~a~y~~Pv~l~~~~~~~~~sFst~F~F~I~~~~~~~~g   80 (234)
T 2bqp_A            2 ETTSFLITKFSPDQQNLIFQGDGY-TTKEKLTLTKAVKNTVGRALYSSPIHIWDRETGNVANFVTSFTFVINAPNSYNVA   80 (234)
T ss_dssp             EEEEEEESSBCTTCTTEEEEETCE-EETBEEEEECSCTTCEEEEEESSCEECBCTTTCCBCEEEEEEEEEEECSSTTSCC
T ss_pred             cceEEEcCCCCCCCCCEEEeecee-cCCCEEEeCCCCCCCEEEEEECCCEEcccCCCCceeeEEEEEEEEEeCCCCCCCC
Confidence            46799999998  58999999999 5689999999999999999999999999999999999999999999987767799


Q ss_pred             CceEEEEecCCCCCCCCCCccccCCCcccCCCCCCCCceEEEEeecccccccCCCC--CCeeeEecCCCCcCCcccCccc
Q 048419           85 QGLAFIIISTNRPENCLANQFLGLPNITMSSSTKFSTRMLAVEFDIIQNTELIDIN--DNHVGIDISSLISSASEPASYY  162 (653)
Q Consensus        85 dGlaF~l~~~~~~~~~~~g~~lG~~~~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~--~~Hvgid~ns~~s~~~~~~~~~  162 (653)
                      |||||+|+|....|. +.|+||||++.++   ++..+|+|||||||++|.+ +||+  +||||||+||+.|.++.+|   
T Consensus        81 dGlAF~l~p~~~~p~-~~g~~LGl~n~~~---~~~~~~~vAVEFDT~~N~~-~Dp~~~~nHVgIdvns~~S~~s~~~---  152 (234)
T 2bqp_A           81 DGFTFFIAPVDTKPQ-TGGGYLGVFNSAE---YDKTTQTVAVEFDTFYNAA-WDPSNRDRHIGIDVNSIKSVNTKSW---  152 (234)
T ss_dssp             CEEEEEEEETTCCCC-CCGGGTTTCSCSS---CCGGGCCEEEEEECSCCTT-TSCTTCCCEEEEEESSSSCSEEEEC---
T ss_pred             CcEEEEEecCCCCCC-CCCCccccccccC---CCCCCcEEEEEEecccCcc-cCCCCCCCceeEeeCCccccceEee---
Confidence            999999999876665 7889999998763   4567899999999999988 6999  9999999999999988764   


Q ss_pred             cCCCCccccccCCCCceEEEEEecCCceEEEEEEeeCCCC---CCCCCceeeeecCCcccccceEEeEecccCcccceee
Q 048419          163 SGNNHRIPILLRSGDPIQAWVDYSSQEMLINVSICPLGVP---KPYRPLISLPIDLSSVIDEYMYTGFSASTGLITASHN  239 (653)
Q Consensus       163 ~~~~~~~~~~l~~g~~~~~~I~Y~~~~~~l~v~~~~~~~~---~~~~~~l~~~~dL~~~l~~~~~vGFsastg~~~~~~~  239 (653)
                               ++.+|+.++|||+|++.+++|+|+|.+.+.+   +|..|+|++.+||+.+||++||||||||||...|.|+
T Consensus       153 ---------~l~~g~~~~v~I~Yd~~~~~L~V~l~~~~~~~~~~p~~~~ls~~vdL~~~l~~~~yvGFSAsTG~~~~~H~  223 (234)
T 2bqp_A          153 ---------KLQNGEEANVVIAFNAATNVLTVSLTYPNNSLEEEVTSYTLSDVVSLKDVVPEWVRIGFSATTGAEYAAHE  223 (234)
T ss_dssp             ---------CCCTTCEEEEEEEEETTTTEEEEEEEECC------CEEEEEEEECCGGGTSCSEEEEEEEEECSSSCCEEE
T ss_pred             ---------EEcCCCEEEEEEEEeCCCCEEEEEEecCCCCcccCCCcceEEEEechHHhCCCceEEEEEeccCCCcccEE
Confidence                     3678999999999999999999999987765   6778999999999999999999999999999999999


Q ss_pred             ecceeeeec
Q 048419          240 VHGWSISIG  248 (653)
Q Consensus       240 i~sWsf~~~  248 (653)
                      |++|+|++.
T Consensus       224 IlsWsF~s~  232 (234)
T 2bqp_A          224 VLSWSFHSE  232 (234)
T ss_dssp             EEEEEEEEE
T ss_pred             EEEEEEEee
Confidence            999999864

>1n47_A Isolectin B4; cancer antigen, vicia villosa lectin, glycoprotein TN-bindin protein, carbohydrate recognition, sugar binding protein; HET: NAG FUC TNR; 2.70A {Vicia villosa} SCOP: b.29.1.1

Probab=100.00  E-value=3.3e-58  Score=451.61  Aligned_cols=220  Identities=28%  Similarity=0.458  Sum_probs=198.6

Q ss_pred             CceeEEeCCCC--CCCeEEecceEecCCCcEEecCCC-----CCceEEEEcCCCeecccCCCCceeeeEEEEEEEEecCC
Q 048419            7 DTTSFLYNGFL--HANLSLEGAAYISTSGILTVTNKS-----EGLIGHALYPNPLRFKTSNKSVAIDFRTNFVFSILPKY   79 (653)
Q Consensus         7 ~~~~f~~~~f~--~~~l~~~g~a~~~~~g~l~Lt~~~-----~~~~Gr~~y~~pi~~~~~~~~~~~sF~t~F~f~i~~~~   79 (653)
                      .+++|+|+.|.  ..||+|+|||.+.++|.|+||+..     .+++|||+|++||+|||+.+  ++||+|+|+|.|.+.+
T Consensus         2 ~~~~F~f~~F~~~~~~l~l~G~A~v~~~g~l~LT~~~~~~~~~~~~Gra~y~~Pi~l~d~~~--~~sFsT~F~F~I~~~~   79 (233)
T 1n47_A            2 ESTSFSFTNFNPNQNNLILQEDALVNSAGTLELTAVAAGAPVPDSLGRALYAAPIHIHDNTT--LASFTTSFSFVMAAPA   79 (233)
T ss_dssp             EEEEEEESSCCTTCTTEEEEETCEECTTSCEESSCBSSSSBCTTCEEEEEESSCEECBCSSC--BCEEEEEEEEECCCSS
T ss_pred             cceEEEcCCCCCCCCCeEEccceEEccCCcEEeccCcCCCccCCCeEEEEECCCEeccCCCC--cCCEEEEEEEEEeCCC
Confidence            46899999998  689999999999878999999876     47999999999999999877  9999999999999876


Q ss_pred             CCCCCCceEEEEecCCCCCCCCCCccccCCCcccCCCCCCCCceEEEEeecccccccCCCCCCeeeEecCCCCcCCcccC
Q 048419           80 PDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTKFSTRMLAVEFDIIQNTELIDINDNHVGIDISSLISSASEPA  159 (653)
Q Consensus        80 ~~~~gdGlaF~l~~~~~~~~~~~g~~lG~~~~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~~~Hvgid~ns~~s~~~~~~  159 (653)
                      ...+||||||||+|....|. +.|+||||++.++   ++..+|+|||||||++|.  +||++||||||+||+.|.++++|
T Consensus        80 ~~~~gdGlAF~l~p~~~~p~-~~g~~LGl~n~~~---~~~~n~~vAVEFDT~~N~--~Dp~~nHvGIdvns~~S~~~~~~  153 (233)
T 1n47_A           80 AAAVADGLAFFLAPPDTQPQ-ARGGFLGLFADRA---HDASYQTVAVEFDTYSNA--WDPNYTHIGIDTNGIESKKTTPF  153 (233)
T ss_dssp             TTSCCEEEEEEEECTTCCCC-CCGGGTTTCSSSS---CCGGGCCEEEEEECSCCT--TSCSSCEEEEEESSSSCSEEEEC
T ss_pred             CCCCCCcEEEEEecCCCCCC-CCCCcccccccCC---CCccCceEEEEeccccCC--CCCCCCcEEEccCCccccccccc
Confidence            67789999999999876665 7889999998753   456799999999999998  79999999999999999988764


Q ss_pred             ccccCCCCccccccCCCCceEEEEEecCCceEEEEEEeeCCCCCCCCCceeeeecCCcccccceEEeEecccCcc---cc
Q 048419          160 SYYSGNNHRIPILLRSGDPIQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLI---TA  236 (653)
Q Consensus       160 ~~~~~~~~~~~~~l~~g~~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~~l~~~~dL~~~l~~~~~vGFsastg~~---~~  236 (653)
                                  ++.+|+.++|||+|++.+++|+|+|.+.+.  +..|+|++.+||+.+||++||||||||||..   .|
T Consensus       154 ------------~l~~g~~~~v~I~Yd~~~~~L~V~l~~~~~--~~~~~ls~~vdL~~~l~~~~~vGFSAsTG~~~~~~~  219 (233)
T 1n47_A          154 ------------DMVYGEKANIVITYQASTKALAASLVFPVS--QTSYAVSARVDLRDILPEYVRVGFSATTGLNAGVVE  219 (233)
T ss_dssp             ------------CCCTTSCEEEEEEEETTTTEEEEEEEETTT--TEEEEEEEECCGGGTSCSEEEEEEEEEECSSTTCCC
T ss_pred             ------------cccCCCEEEEEEEEeCCCCEEEEEEecCCC--CCcceEEEEechHHhCCCceEEEEEeccCCCccccc
Confidence                        367999999999999999999999988654  3468999999999999999999999999998   99


Q ss_pred             eeeecceeeeec
Q 048419          237 SHNVHGWSISIG  248 (653)
Q Consensus       237 ~~~i~sWsf~~~  248 (653)
                      .|+|++|+|++.
T Consensus       220 ~h~IlsWsF~s~  231 (233)
T 1n47_A          220 THDIVSWSFAVS  231 (233)
T ss_dssp             CCEEEEEEEEEE
T ss_pred             eeEEEEEEEEee
Confidence            999999999864

>1wbf_A Protein (agglutinin); lectin (agglutinin), legume lectin, protein crystallography, group specificity, saccharide free form; HET: NAG; 2.30A {Psophocarpus tetragonolobus} SCOP: b.29.1.1 PDB: 2d3s_A* 2dtw_A* 1wbl_A* 2dty_A* 2du0_A* 2du1_A* 2e51_A* 2e53_A* 2zmk_A* 2zml_A* 2zmn_A* 2e7t_A* 2e7q_A*

Probab=100.00  E-value=2.8e-58  Score=453.56  Aligned_cols=219  Identities=31%  Similarity=0.440  Sum_probs=198.6

Q ss_pred             CceeEEeCCCC--CCCeEEecceEecCCCcEEecCCC-----CCceEEEEcCCCeecccCCCCceeeeEEEEEEEEecC-
Q 048419            7 DTTSFLYNGFL--HANLSLEGAAYISTSGILTVTNKS-----EGLIGHALYPNPLRFKTSNKSVAIDFRTNFVFSILPK-   78 (653)
Q Consensus         7 ~~~~f~~~~f~--~~~l~~~g~a~~~~~g~l~Lt~~~-----~~~~Gr~~y~~pi~~~~~~~~~~~sF~t~F~f~i~~~-   78 (653)
                      ++++|+|+.|.  ..||+|+|||++.++|.|+||+..     ..++|||+|++||+|||+.+++++||+|+|+|.|.+. 
T Consensus         2 ~~~~F~f~~F~~~~~~l~l~G~A~v~~~g~l~LT~~~~~~~~~~~~Gra~y~~Pv~l~d~~tg~vaSFsT~F~F~I~~~~   81 (242)
T 1wbf_A            2 KTISFNFNQFHQNEEQLKLQRDARISSNSVLELTKVVNGVPTWNSTGRALYAKPVQVWDSTTGNVASFETRFSFSIRQPF   81 (242)
T ss_dssp             CEEEEEESSCCTTCTTEEEEETCEECTTSCEESSCEETTEECSSCEEEEEESSCEECBCTTTCCBCEEEEEEEEECCCSC
T ss_pred             cceEEEcCCCCCCCCCeEEccceEEccCCcEEecCcccCCcccCCeEEEEECCCEecccCCCCCeeeEEEEEEEEEeCCC
Confidence            46899999998  689999999999878999999876     6899999999999999999999999999999999886 


Q ss_pred             CCCCCCCceEEEEecCCCCCCCCCCccccCCCcccCCCCCCCCceEEEEeecccccccCCCCCCeeeEecCCCCcCCccc
Q 048419           79 YPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTKFSTRMLAVEFDIIQNTELIDINDNHVGIDISSLISSASEP  158 (653)
Q Consensus        79 ~~~~~gdGlaF~l~~~~~~~~~~~g~~lG~~~~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~~~Hvgid~ns~~s~~~~~  158 (653)
                      +...+||||||||+|....+. +.|+||||+|.+      ..+|+|||||||++|.  +||++||||||+||+.|.++++
T Consensus        82 ~~~~~gdGlAF~l~p~~~~~~-~~g~~LGl~n~~------~~~~~vAVEFDT~~N~--~Dp~~nHVGIdvNs~~S~~~~~  152 (242)
T 1wbf_A           82 PRPHPADGLVFFIAPPNTQTG-EGGGYFGIYNPL------SPYPFVAVEFDTFRNT--WDPQIPHIGIDVNSVISTKTVP  152 (242)
T ss_dssp             CSSCCCEEEEEEEECSSCCCC-CCGGGTTTCCTT------SCCCCEEEEEECSCCT--TCCSSSEEEEEESSSSCSEEEE
T ss_pred             CCCCCCCcEEEEEecCCCCCC-CCCCccccccCC------CcCcEEEEEeccccCC--CCCCCCeEEEECCCccccceee
Confidence            567789999999999876554 788999999753      4688999999999998  7999999999999999988876


Q ss_pred             CccccCCCCccccccCCCCceEEEEEecCCceEEEEEEeeCCCCCCCCCceeeeecCCcccccceEEeEeccc----Ccc
Q 048419          159 ASYYSGNNHRIPILLRSGDPIQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSAST----GLI  234 (653)
Q Consensus       159 ~~~~~~~~~~~~~~l~~g~~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~~l~~~~dL~~~l~~~~~vGFsast----g~~  234 (653)
                      |            +|.+|+.++|||+||+.+++|+|+|.+.+.  |..|+|+..+||+.+||++|||||||||    |..
T Consensus       153 ~------------~l~~G~~~~v~I~Yd~~~~~L~V~l~~~~~--~~~~~ls~~vdL~~~l~e~v~VGFSAsTg~~~G~~  218 (242)
T 1wbf_A          153 F------------TLDNGGIANVVIKYDASTKILHVVLVFPSL--GTIYTIADIVDLKQVLPESVNVGFSAATGDPSGKQ  218 (242)
T ss_dssp             C------------CCCTTSCEEEEEEEETTTTEEEEEEEETTT--TEEEEEEEECCHHHHSCSEEEEEEEEEECCGGGCC
T ss_pred             e------------EecCCCEEEEEEEEeCCCCEEEEEEccCCC--CCcceEEEEechHHhcCCceEEEEEEeecCcCCcc
Confidence            4            377999999999999999999999988754  4568999999999999999999999999    887


Q ss_pred             ---cceeeecceeeeec
Q 048419          235 ---TASHNVHGWSISIG  248 (653)
Q Consensus       235 ---~~~~~i~sWsf~~~  248 (653)
                         .|.|+|++|+|++.
T Consensus       219 ~~~~~~h~IlsWsF~s~  235 (242)
T 1wbf_A          219 RNATETHDILSWSFSAS  235 (242)
T ss_dssp             TTCCCCCEEEEEEEEEE
T ss_pred             ccccceEEEEEEEeEec
Confidence               89999999999875

>1f9k_A Acidic lectin; legume lectin, glycosylated protein, H-antigenic specificity agglutinin, sugar binding protein; HET: NAG MAN AMG; 3.00A {Psophocarpus tetragonolobus} SCOP: b.29.1.1 PDB: 1fay_A*

Probab=100.00  E-value=6.4e-58  Score=451.06  Aligned_cols=218  Identities=29%  Similarity=0.433  Sum_probs=198.2

Q ss_pred             ceeEEeCCCC--CCCeEEecceEecCCCcEEecCCC------CCceEEEEcCCCeecccCCCCceeeeEEEEEEEEecC-
Q 048419            8 TTSFLYNGFL--HANLSLEGAAYISTSGILTVTNKS------EGLIGHALYPNPLRFKTSNKSVAIDFRTNFVFSILPK-   78 (653)
Q Consensus         8 ~~~f~~~~f~--~~~l~~~g~a~~~~~g~l~Lt~~~------~~~~Gr~~y~~pi~~~~~~~~~~~sF~t~F~f~i~~~-   78 (653)
                      +++|+|+.|.  ..+|+|+|+|.+.++|.|+||+..      .+++|||+|++||+|||+.+++++||+|+|+|.|.+. 
T Consensus         2 ~~~F~f~~F~~~~~~l~l~G~A~v~~~g~l~LT~~~~~~~~~~~~~Gra~y~~Pv~l~d~~~g~vasFsT~F~F~I~~~~   81 (238)
T 1f9k_A            2 TQSFNFDHFEENSKELNLQRQASIKSNGVLELTKLTKNGVPVWKSTGRALYAEPIKIWDSTTGNVASFETRFSFNITQPY   81 (238)
T ss_dssp             EEEEEESSCCSSCTTEEEEETCEECTTSCEECSCSEETTEECCSCEEEEEESSCEECBCTTTCCBCEEEEEEEEEEECCC
T ss_pred             CeEEEcCCCCCCCCCeEEccceEECcCCcEEecCccccCccccCCEEEEEECCCEEeecCCCCCeeeEEEEEEEEEecCC
Confidence            5799999998  689999999999878999999876      5799999999999999999999999999999999987 


Q ss_pred             CCCCCCCceEEEEecCCCCCCCCCCccccCCCcccCCCCCCCCceEEEEeecccccccCCCCCCeeeEecCCCCcCCccc
Q 048419           79 YPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTKFSTRMLAVEFDIIQNTELIDINDNHVGIDISSLISSASEP  158 (653)
Q Consensus        79 ~~~~~gdGlaF~l~~~~~~~~~~~g~~lG~~~~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~~~Hvgid~ns~~s~~~~~  158 (653)
                      +...+||||||||+|....+. +.|+||||+|..     +. +|+|||||||++|.  +||++||||||+||+.|.++.+
T Consensus        82 ~~~~~gdGlAF~l~p~~~~~~-~~g~~LGl~n~~-----~~-~~~vAVEFDT~~N~--~Dp~~nHVgIdvns~~S~~s~~  152 (238)
T 1f9k_A           82 AYPEPADGLTFFMVPPNSPQG-EDGGNLGVFKPP-----EG-DNAFAVEFDTFQNT--WDPQVPHIGIDVNSIVSSKTLH  152 (238)
T ss_dssp             SSSCCCEEEEEEEECTTCCCC-CSGGGTTTCCSS-----CC-SCCEEEEEECSCCT--TCCSSSEEEEEESSSSCSEEEE
T ss_pred             CCCCCCCcEEEEEccCCCCCC-CCCCcccccccC-----CC-CcEEEEEEecccCC--CCCCCCeEEEecCCccccceEe
Confidence            667789999999999876554 788999999864     34 89999999999998  7999999999999999988876


Q ss_pred             CccccCCCCccccccCCCCceEEEEEecCCceEEEEEEeeCCCCCCCCCceeeeecCCccccc--ceEEeEecccCcc--
Q 048419          159 ASYYSGNNHRIPILLRSGDPIQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDE--YMYTGFSASTGLI--  234 (653)
Q Consensus       159 ~~~~~~~~~~~~~~l~~g~~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~~l~~~~dL~~~l~~--~~~vGFsastg~~--  234 (653)
                      |            +|.+|+.++|||+|++.+++|+|+|.+.+.  |..|+|++.|||+.+||+  +||||||||||..  
T Consensus       153 ~------------~l~~g~~~~v~I~Yd~~~~~L~V~l~~~~~--~~~~~ls~~vdL~~~l~~~~~~~vGFSAsTG~~~~  218 (238)
T 1f9k_A          153 F------------QLENGGVANVVIKYDSPTKILNVVLAFHSV--GTVYTLSNIVDLKQEFPNSEWVNVGLSATTGYQKN  218 (238)
T ss_dssp             C------------CCCTTCCEEEEEEEETTTTEEEEEEEETTT--TEEEEEEEECCHHHHSTTCSEEEEEEEEEECSSTT
T ss_pred             e------------cccCCCEEEEEEEEeCCCCEEEEEEecCCC--CCceeEEEEechHHhCCCCceEEEEEEeCcCCCCc
Confidence            4            377999999999999999999999988754  556899999999999999  9999999999998  


Q ss_pred             -cceeeecceeeeec
Q 048419          235 -TASHNVHGWSISIG  248 (653)
Q Consensus       235 -~~~~~i~sWsf~~~  248 (653)
                       .|.|+|++|+|++.
T Consensus       219 ~~~~h~IlsWsF~s~  233 (238)
T 1f9k_A          219 AVETHEIISWSFTSS  233 (238)
T ss_dssp             CCCEEEEEEEEEEEE
T ss_pred             ccceEEEEEeEeEee
Confidence             99999999999875

>1gsl_A Griffonia simplicifolia lectin 4; glycoprotein, manganese; HET: FUC GAL MAG NAG BMA; 2.00A {Griffonia simplicifolia} SCOP: b.29.1.1 PDB: 1lec_A* 1led_A*

Probab=100.00  E-value=6.6e-58  Score=451.80  Aligned_cols=221  Identities=24%  Similarity=0.359  Sum_probs=198.9

Q ss_pred             CceeEEeCCC----C--CCCeEEecceEecCCCcEEecCCC------CCceEEEEcCCCeecccCCCCceeeeEEEEEEE
Q 048419            7 DTTSFLYNGF----L--HANLSLEGAAYISTSGILTVTNKS------EGLIGHALYPNPLRFKTSNKSVAIDFRTNFVFS   74 (653)
Q Consensus         7 ~~~~f~~~~f----~--~~~l~~~g~a~~~~~g~l~Lt~~~------~~~~Gr~~y~~pi~~~~~~~~~~~sF~t~F~f~   74 (653)
                      ++++|+|+.|    .  ..+|+|+|||.+. +|.|+||+..      .+++|||+|++||+||+ .+++++||+|+|+|.
T Consensus         2 ~~~~F~f~~F~~~~~~~~~~l~l~GdA~i~-~g~l~LT~~~~~~~~~~~~~Gra~y~~Pv~l~~-~tg~vasFsT~F~F~   79 (243)
T 1gsl_A            2 NTVNFTYPDFWSYSLKNGTEITFLGDATRI-PGALQLTKTDANGNPVRSSAGQASYSEPVFLWD-STGKAASFYTSFTFL   79 (243)
T ss_dssp             CCCEEEESCCCCTTCCTTSSEEEEETCEEE-TTEEECSCBCTTSCBCSSEEEEEEESSCEECBC-TTSCBCEEEEEEEEE
T ss_pred             cceEEEcCCCccccCCCCCCEEEccceEec-CCcEEecCCccCCcccCCCeEEEEECCCEEccC-CCCCcCceEEEEEEE
Confidence            4679999999    6  5799999999998 9999999876      57999999999999999 999999999999999


Q ss_pred             EecCCCCCCCCceEEEEecCCCCCCCCCCccccCCCcccCCCCCCCCceEEEEeecccccccCCCCCCeeeEecCCCCcC
Q 048419           75 ILPKYPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTKFSTRMLAVEFDIIQNTELIDINDNHVGIDISSLISS  154 (653)
Q Consensus        75 i~~~~~~~~gdGlaF~l~~~~~~~~~~~g~~lG~~~~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~~~Hvgid~ns~~s~  154 (653)
                      |.+. ...+||||||||+|....+. +.|+||||++.+++ .++..+|+|||||||++|.+|.||++||||||+||+.|.
T Consensus        80 I~~~-~~~~gdGlAF~l~p~~~~~~-~~g~~LGl~n~~~~-~~~~~n~~vAVEFDT~~N~~~~Dp~~nHvGIdvns~~S~  156 (243)
T 1gsl_A           80 LKNY-GAPTADGLAFFLAPVDSSVK-DYGGFLGLFRHETA-ADPSKNQVVAVEFDTWINKDWNDPPYPHIGIDVNSIVSV  156 (243)
T ss_dssp             EEES-SSSCBCEEEEEEEETTCCCC-CCGGGTTTSCTTTT-TCGGGCCCEEEEEECSCCGGGTCCSSCEEEEEESSSSCS
T ss_pred             EecC-CCCCCCCEEEEEecCCCCCC-CCCCcccccccccc-cCCccCcEEEEEeccccccccCCCCCCceeeccCCcccc
Confidence            9987 66789999999999876554 78899999987542 256678999999999999988899999999999999999


Q ss_pred             CcccCccccCCCCccccccCC---CCceEEEEEecCCceEEEEEEeeCCCCCCCCCceeeeecCCcccccceEEeEeccc
Q 048419          155 ASEPASYYSGNNHRIPILLRS---GDPIQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSAST  231 (653)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~l~~---g~~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~~l~~~~dL~~~l~~~~~vGFsast  231 (653)
                      ++++|.            |.+   |+.++|||+|++.+++|+|+|.+.+.   ..|+|++.+||+.+||++|||||||||
T Consensus       157 ~~~~~~------------l~~~~~g~~~~v~I~Yd~~~~~L~V~l~~~~~---~~~~ls~~vdL~~~l~~~~~vGFSAsT  221 (243)
T 1gsl_A          157 ATTRWE------------NDDAYGSSIATAHITYDARSKILTVLLSYEHG---RDYILSHVVDLAKVLPQKVRIGFSAGV  221 (243)
T ss_dssp             EEEECC------------HHHHTSCCEEEEEEEEETTTTEEEEEEEETTS---CEEEEEEECCHHHHSCSEEEEEEEEEE
T ss_pred             ceeeeE------------EeccCCCcEEEEEEEEeCCCCEEEEEEecCCC---CceeEEEEechHHhCCCceEEEEEecc
Confidence            887752            456   99999999999999999999988654   468999999999999999999999999


Q ss_pred             Ccccceeeecceeeeec
Q 048419          232 GLITASHNVHGWSISIG  248 (653)
Q Consensus       232 g~~~~~~~i~sWsf~~~  248 (653)
                      | ..|.|+|++|+|++.
T Consensus       222 G-~~~~h~IlsWsF~s~  237 (243)
T 1gsl_A          222 G-YDEVTYILSWHFFST  237 (243)
T ss_dssp             C-BSEEEEEEEEEEEEE
T ss_pred             C-CcceeEEEEEEEEee
Confidence            9 999999999999875

>1avb_A Arcelin-1; lectin-like glycoprotein, plant defense, insecticidal activi lectin; HET: NAG; 1.90A {Phaseolus vulgaris} SCOP: b.29.1.1

Probab=100.00  E-value=7.2e-58  Score=446.58  Aligned_cols=217  Identities=29%  Similarity=0.458  Sum_probs=196.8

Q ss_pred             CceeEEeCCCCCCCeEEecceEecCCCcEEecCC---CCCceEEEEcCCCeecccCCCCceeeeEEEEEEEEecCCCCCC
Q 048419            7 DTTSFLYNGFLHANLSLEGAAYISTSGILTVTNK---SEGLIGHALYPNPLRFKTSNKSVAIDFRTNFVFSILPKYPDLG   83 (653)
Q Consensus         7 ~~~~f~~~~f~~~~l~~~g~a~~~~~g~l~Lt~~---~~~~~Gr~~y~~pi~~~~~~~~~~~sF~t~F~f~i~~~~~~~~   83 (653)
                      ..++|+|+.|...||+|+|||.+.++|.|+||++   ..+++|||+|++||+||++.+++++||+|+|+|.|.+.+...+
T Consensus         2 ~~~~F~f~~F~~~~l~l~G~A~v~~~g~l~LT~~~~~~~~~~Gra~y~~Pv~l~~~~~g~vaSFsT~F~F~I~~~~~~~~   81 (226)
T 1avb_A            2 NDASFNVETFNKTNLILQGDATVSSEGHLLLTNVKGNEEDSMGRAFYSAPIQINDRTIDNLASFSTNFTFRINAKNIENS   81 (226)
T ss_dssp             EEEEEEESSCCGGGEEEEETCEECTTSCEECSCSSSCCTTCEEEEEESSCEECEEGGGTEEEEEEEEEEEEEEESSTTSC
T ss_pred             cceEEEcCCCCccCEEEeccEEECCCCEEEeCCCCCCccCCeEEEEeCCCEEeecCCCCCcccEEEEEEEEEeCCCCCCC
Confidence            4579999999988999999999987999999998   6789999999999999999999999999999999998877779


Q ss_pred             CCceEEEEecCCCCCCCCCCccccCCCcccCCCCCCCCceEEEEeecccccccCCCCCCeeeEecCCCCcCCcccCcccc
Q 048419           84 GQGLAFIIISTNRPENCLANQFLGLPNITMSSSTKFSTRMLAVEFDIIQNTELIDINDNHVGIDISSLISSASEPASYYS  163 (653)
Q Consensus        84 gdGlaF~l~~~~~~~~~~~g~~lG~~~~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~~~Hvgid~ns~~s~~~~~~~~~~  163 (653)
                      ||||||||+|....|. +.|+||||+|..+   ++..+|+|||||||+         +||||||+||+.|.++++|.   
T Consensus        82 gdGlAF~l~p~~~~p~-~~g~~LGl~n~~~---~~~~~~~vAVEFDT~---------~nHVGIdvNs~~S~~t~~~~---  145 (226)
T 1avb_A           82 AYGLAFALVPVGSRPK-LKGRYLGLFNTTN---YDRDAHTVAVVFDTV---------SNRIEIDVNSIRPIATESCN---  145 (226)
T ss_dssp             CEEEEEEEEETTCCCC-CCGGGTTTCSCSS---CCGGGCCEEEEEETT---------TTEEEEEESSSSCSEEEECC---
T ss_pred             CCcEEEEEecCCCCCC-CCCCcccccccCC---CCCcccEEEEEecCc---------CCccceeecCcccCccccCC---
Confidence            9999999999876665 7889999998753   456789999999998         68999999999999988753   


Q ss_pred             CCCCccccccCCCCceEEEEEecCCceEEEEEEeeCCCCCCCCCceeeeecCCcccccceEEeEecccCcc---cceeee
Q 048419          164 GNNHRIPILLRSGDPIQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLI---TASHNV  240 (653)
Q Consensus       164 ~~~~~~~~~l~~g~~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~~l~~~~dL~~~l~~~~~vGFsastg~~---~~~~~i  240 (653)
                             +.|.+|+.++|||+||+.+++|+|+|.+.+.+  +.|+|++.+||+++||++|||||||+||..   .|.|+|
T Consensus       146 -------~~l~~g~~~~v~I~Yd~~~~~L~V~l~~~~~~--~~~~ls~~vdL~~~l~e~~~VGFSAsTG~~~~~~~~h~I  216 (226)
T 1avb_A          146 -------FGHNNGEKAEVRITYDSPKNDLRVSLLYPSSE--EKCHVSATVPLEKEVEDWVSVGFSATSGSKKETTETHNV  216 (226)
T ss_dssp             -------SGGGTTCEEEEEEEEEGGGTEEEEEEEETTTT--EEEEEEEECCHHHHSCSEEEEEEEEEECSSGGGCEEEEE
T ss_pred             -------ccccCCCeEEEEEEEeCCCcEEEEEEeecCCC--ccceEEEEechHHhCCCceEEEEEeccCCCCcccceeEE
Confidence                   46779999999999999999999999887543  378999999999999999999999999998   999999


Q ss_pred             cceeeeec
Q 048419          241 HGWSISIG  248 (653)
Q Consensus       241 ~sWsf~~~  248 (653)
                      ++|+|++.
T Consensus       217 lsWsF~s~  224 (226)
T 1avb_A          217 LSWSFSSN  224 (226)
T ss_dssp             EEEEEEEE
T ss_pred             EEEEEEee
Confidence            99999863

>1ioa_A Arcelin-5A, ARC5A; lectin-like proteins, plant defense proteins, lectin; HET: NAG FUC; 2.70A {Phaseolus vulgaris} SCOP: b.29.1.1

Probab=100.00  E-value=1.5e-56  Score=440.81  Aligned_cols=216  Identities=29%  Similarity=0.463  Sum_probs=194.8

Q ss_pred             CceeEEeCCCCCCC-eEEecceEecCCCcEEecCCCC------CceEEEEcCCCeecccCCCCceeeeEEEEEEEEecCC
Q 048419            7 DTTSFLYNGFLHAN-LSLEGAAYISTSGILTVTNKSE------GLIGHALYPNPLRFKTSNKSVAIDFRTNFVFSILPKY   79 (653)
Q Consensus         7 ~~~~f~~~~f~~~~-l~~~g~a~~~~~g~l~Lt~~~~------~~~Gr~~y~~pi~~~~~~~~~~~sF~t~F~f~i~~~~   79 (653)
                      .+++|+|+.|...| |+|+|||.+.++|.|+||++..      .++|||+|++||+|||+.  +++||+|+|+|.|.+.+
T Consensus         2 ~~~~F~f~~F~~~~~l~l~G~A~v~~~g~l~LT~~~~~~~~~~~s~Gra~y~~Pi~l~d~~--~vaSFsT~F~F~I~~~~   79 (240)
T 1ioa_A            2 TETSFNFPNFHTDDKLILQGNATISSKGQLQLTGVGSNELPRVDSLGRAFYSDPIQIKDSN--NVASFNTNFTFIIRAKN   79 (240)
T ss_dssp             CCCEEEESSCCTTSSEEEEETCEECTTSCEETTCBCTTSSBCSSCBEEEEESSCEECBCSS--CBEEEEEEEEEECCBSC
T ss_pred             cceEEEcCCCCCCCcEEEccceEECCCCeEEeCCCCCCCccccCceEEEEECCCEEccCCC--ccccEEEEEEEEEeCCC
Confidence            56899999999889 9999999998799999998775      799999999999999986  89999999999999887


Q ss_pred             CCCCCCceEEEEecCCCCCCCCCCccccCCCcccCCCCCCCCceEEEEeecccccccCCCCCCeeeEecCCCCcCCcccC
Q 048419           80 PDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTKFSTRMLAVEFDIIQNTELIDINDNHVGIDISSLISSASEPA  159 (653)
Q Consensus        80 ~~~~gdGlaF~l~~~~~~~~~~~g~~lG~~~~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~~~Hvgid~ns~~s~~~~~~  159 (653)
                      ...+||||||||+|....|. +.|+||||+|.++   ++..+|+|||||||+         +||||||+||+.|.++.+|
T Consensus        80 ~~~~gdGlAF~l~p~~~~p~-~~g~~LGL~n~~~---~~~~~~~vAVEFDT~---------~nHVGIdvNs~~S~~t~~~  146 (240)
T 1ioa_A           80 QSISAYGLAFALVPVNSPPQ-KKQEFLGIFNTNN---PEPNARTVAVVFNTF---------KNRIDFDKNFIKPYVNENC  146 (240)
T ss_dssp             TTSCCEEEEEEEEETTCCCC-CCGGGTTTCCCSS---CCGGGCCEEEEEETT---------TTEEEEEESSSSCSEEEEC
T ss_pred             CCCCCCcEEEEEecCCCCCC-CCCCcccccccCC---CCCcCcEEEEEecCc---------CCceeeeeCCccccccccC
Confidence            77799999999999876666 8889999998753   456789999999998         6899999999999998875


Q ss_pred             ccccCCCCccccccCCCCceEEEEEecCCceEEEEEEeeCCCCCCCCCceeeeecCCcccccceEEeEecccCcc---cc
Q 048419          160 SYYSGNNHRIPILLRSGDPIQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLI---TA  236 (653)
Q Consensus       160 ~~~~~~~~~~~~~l~~g~~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~~l~~~~dL~~~l~~~~~vGFsastg~~---~~  236 (653)
                      .          +.|.+|+.++|||+||+.+++|+|+|.+.+.  ++.|+|+..|||+++|||+|||||||+||..   .|
T Consensus       147 ~----------~~l~~g~~~~v~I~Yd~~~~~L~V~l~~~~~--~~~~~ls~~vdL~~~l~e~v~VGFSAsTG~~~~~~~  214 (240)
T 1ioa_A          147 D----------FHKYNGEKTDVQITYDSSNNDLRVFLHFTVS--QVKCSVSATVHLEKEVDEWVSVGFSPTSGLTEDTTE  214 (240)
T ss_dssp             C----------HHHHCSSCEEEEEEEETTTTEEEEEEEETTT--CCEEEEEEECCGGGTSCSEEEEEEEEEECSSTTTCB
T ss_pred             C----------ccccCCCEEEEEEEEeCCCcEEEEEEecCCC--CccceeEEEechHHhCCCceEEEEEeccCCCCcccc
Confidence            3          4677999999999999999999999988754  3478999999999999999999999999998   99


Q ss_pred             eeeecceeeeecC
Q 048419          237 SHNVHGWSISIGG  249 (653)
Q Consensus       237 ~~~i~sWsf~~~~  249 (653)
                      .|+|++|+|++..
T Consensus       215 ~H~IlsWsF~s~~  227 (240)
T 1ioa_A          215 THDVLSWSFSSKF  227 (240)
T ss_dssp             CCEEEEEEEEEEE
T ss_pred             eeEEEEEEEEeeC
Confidence            9999999998753

>1dhk_B Bean lectin-like inhibitor, porcine pancreatic alpha-amylase; CO (hydrolase-inhibitor), complex (hydrolase-inhibitor) comple; HET: NAG; 1.85A {Phaseolus vulgaris} SCOP: b.29.1.1 PDB: 1viw_B*

Probab=100.00  E-value=3.1e-53  Score=411.41  Aligned_cols=200  Identities=25%  Similarity=0.419  Sum_probs=176.3

Q ss_pred             CceeEEeCCCCCCCeEEecceEecCCCcEEecCCCCCceEEEEcCCCeecccCCCCceeeeEEEEEEEEecCCCCCCCCc
Q 048419            7 DTTSFLYNGFLHANLSLEGAAYISTSGILTVTNKSEGLIGHALYPNPLRFKTSNKSVAIDFRTNFVFSILPKYPDLGGQG   86 (653)
Q Consensus         7 ~~~~f~~~~f~~~~l~~~g~a~~~~~g~l~Lt~~~~~~~Gr~~y~~pi~~~~~~~~~~~sF~t~F~f~i~~~~~~~~gdG   86 (653)
                      ..++|+|++|...||+|+|+|.+.++|.|+||++..+++|||+|++||+||++.+++++||+|+|+|.|.+++...+|||
T Consensus         2 ~~~~F~f~~F~~~~l~l~G~A~v~~~g~l~LT~~~~~~~Gra~y~~Pi~l~~~~~g~vaSFsT~F~F~I~~~~~~~~gdG   81 (223)
T 1dhk_B            2 TETSFIIDAFNKTNLILQGDATVSSNGNLQLSYNSYDSMSRAFYSAPIQIRDSTTGNVASFDTNFTMNIRTHRQANSAVG   81 (223)
T ss_dssp             CCCEEEESSCCGGGEEEESSEEECTTSCEEESSSCSSEEEEEEESSCEESEETTTTEECEEEEEEEEEEECCC---CCSE
T ss_pred             cceEEEcCCCCcCCEEEeccEEECCCCEEEcCCCCCCCEEEEEECCCEEeecCCCCCccceEEEEEEEEeCCCCCCCCCc
Confidence            56799999999889999999999879999999998899999999999999999999999999999999998777779999


Q ss_pred             eEEEEecCCCCCCCCCCccccCCCcccCCCCCCCCceEEEEeecccccccCCCCCCeeeEecCCCCcCCcccCccccCCC
Q 048419           87 LAFIIISTNRPENCLANQFLGLPNITMSSSTKFSTRMLAVEFDIIQNTELIDINDNHVGIDISSLISSASEPASYYSGNN  166 (653)
Q Consensus        87 laF~l~~~~~~~~~~~g~~lG~~~~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~~~Hvgid~ns~~s~~~~~~~~~~~~~  166 (653)
                      |||||+|....|.                     +++|||||||+         +||||||+||+ |.++.+|.      
T Consensus        82 lAF~l~p~~~~p~---------------------~~~vAVEFDT~---------~nHVGIdvNsi-S~~~~~~~------  124 (223)
T 1dhk_B           82 LDFVLVPVQPESK---------------------GDTVTVEFDTF---------LSRISIDVNNN-DIKSVPWD------  124 (223)
T ss_dssp             EEEEEEEC---------------------------CCEEEEEETT---------TTEEEEEETTE-EEEEEECC------
T ss_pred             eEEEEecCCCCCC---------------------ccEEEEEecCC---------CCcccccCCcc-ccccccCC------
Confidence            9999999754321                     23699999998         68999999999 98887752      


Q ss_pred             CccccccCCCCceEEEEEecCCceEEEEEEeeCCCCCCCCCceeeeecCCcccccceEEeEecccCcc---cceeeecce
Q 048419          167 HRIPILLRSGDPIQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLI---TASHNVHGW  243 (653)
Q Consensus       167 ~~~~~~l~~g~~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~~l~~~~dL~~~l~~~~~vGFsastg~~---~~~~~i~sW  243 (653)
                          +.|.+|+.++|||+||+.+++|+|++.+.+.  ++.|+|++.+||+++||++|||||||+||..   .|.|+|++|
T Consensus       125 ----~~l~~g~~~~v~I~Yd~~~~~L~V~l~~~~~--~~~~~ls~~vdLs~~l~e~~~VGFSAsTG~~~~~~~~H~IlsW  198 (223)
T 1dhk_B          125 ----VHDYDGQNAEVRITYNSSTKVFSVSLSNPST--GKSNNVSTTVELEKEVYDWVSVGFSATSGAYQWSYETHDVLSW  198 (223)
T ss_dssp             ----GGGTTTSCEEEEEEEETTTTEEEEEEECTTT--CCEEEEEEECCCCSGGGSEEEEEEEEEECSGGGSCCEEEEEEE
T ss_pred             ----ccccCCCEEEEEEEEeCCCCEEEEEEecCCC--CccceEEEEechHHhCCCceEEEEEeccCCCccccceEEEEEE
Confidence                4677999999999999999999999987654  3478999999999999999999999999998   999999999


Q ss_pred             eeeecC
Q 048419          244 SISIGG  249 (653)
Q Consensus       244 sf~~~~  249 (653)
                      +|++..
T Consensus       199 sF~s~~  204 (223)
T 1dhk_B          199 SFSSKF  204 (223)
T ss_dssp             EEEEEC
T ss_pred             EEEecc
Confidence            998764

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=100.00  E-value=1.3e-53  Score=446.07  Aligned_cols=264  Identities=23%  Similarity=0.369  Sum_probs=210.5

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeC-----CCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMP-----SLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLL  404 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  404 (653)
                      ++|...+.||+|+||.||+|++.     .+++.||||+++....+..++|.+|+++|++|+|||||+++|+|.+.+.++|
T Consensus        41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l  120 (329)
T 4aoj_A           41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM  120 (329)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence            34667889999999999999865     3578999999987777778899999999999999999999999999999999


Q ss_pred             EEeccCCCCchhhhhccccc----------ccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcE
Q 048419          405 VYDYVPNGSLDKLLFDKDHK----------LRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNA  474 (653)
Q Consensus       405 V~E~~~~gsL~~~l~~~~~~----------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~  474 (653)
                      |||||++|+|.++|+.....          ....++|.++++|+.|||+||+|||+   ++|+||||||+||||++++++
T Consensus       121 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDLKp~NILl~~~~~~  197 (329)
T 4aoj_A          121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAG---LHFVHRDLATRNCLVGQGLVV  197 (329)
T ss_dssp             EEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEETTTEE
T ss_pred             EEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhc---CCeecccccHhhEEECCCCcE
Confidence            99999999999999765321          12469999999999999999999999   899999999999999999999


Q ss_pred             EEEeecCcccccCCCC-CcccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHH
Q 048419          475 KLGDFGLAKIYEHGAN-PQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVK  552 (653)
Q Consensus       475 kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~  552 (653)
                      ||+|||+++....... .......||+.|||||++.+..++.++|||||||+||||+| |+.||......+   +.+.+.
T Consensus       198 Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~---~~~~i~  274 (329)
T 4aoj_A          198 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTE---AIDCIT  274 (329)
T ss_dssp             EECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHH---HHHHHH
T ss_pred             EEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHH---HHHHHH
Confidence            9999999987644322 23344679999999999999999999999999999999999 899998654432   112221


Q ss_pred             hhhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcCCCCCC
Q 048419          553 ELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLGDSSLP  611 (653)
Q Consensus       553 ~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~p  611 (653)
                      .    +.       ++ ..+...++.+.+|+.+||+.||++||||.||+++|+.-...|
T Consensus       275 ~----g~-------~~-~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~p  321 (329)
T 4aoj_A          275 Q----GR-------EL-ERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQAP  321 (329)
T ss_dssp             H----TC-------CC-CCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHSC
T ss_pred             c----CC-------CC-CCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhCC
Confidence            1    11       00 112223467889999999999999999999999998654443

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=100.00  E-value=8.3e-54  Score=441.61  Aligned_cols=259  Identities=25%  Similarity=0.404  Sum_probs=213.6

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeC-----CCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMP-----SLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLL  404 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  404 (653)
                      ++|...+.||+|+||+||+|++.     .++..||||+++....+..++|.+|+++|++|+|||||+++|+|.+.+.++|
T Consensus        13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l   92 (299)
T 4asz_A           13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM   92 (299)
T ss_dssp             GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence            45677899999999999999875     3478899999987777778899999999999999999999999999999999


Q ss_pred             EEeccCCCCchhhhhcccc--------cccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEE
Q 048419          405 VYDYVPNGSLDKLLFDKDH--------KLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKL  476 (653)
Q Consensus       405 V~E~~~~gsL~~~l~~~~~--------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl  476 (653)
                      |||||++|+|.++|.....        .....++|.++++|+.|||+||+|||+   ++|+||||||+||||++++++||
T Consensus        93 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDlKp~NILl~~~~~~Ki  169 (299)
T 4asz_A           93 VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLAS---QHFVHRDLATRNCLVGENLLVKI  169 (299)
T ss_dssp             EEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEE
T ss_pred             EEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCccCHhhEEECCCCcEEE
Confidence            9999999999999976431        113469999999999999999999999   89999999999999999999999


Q ss_pred             EeecCcccccCCCCC-cccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhh
Q 048419          477 GDFGLAKIYEHGANP-QTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKEL  554 (653)
Q Consensus       477 ~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~  554 (653)
                      +|||+++........ ......||+.|||||++.+..++.++|||||||+||||+| |+.||......+   +...+.. 
T Consensus       170 ~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~---~~~~i~~-  245 (299)
T 4asz_A          170 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE---VIECITQ-  245 (299)
T ss_dssp             CCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH---HHHHHHH-
T ss_pred             CCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH---HHHHHHc-
Confidence            999999866443222 2233568999999999999999999999999999999999 899998654432   1112211 


Q ss_pred             hcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          555 HLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       555 ~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                         +..        ...+...++.+.+|+.+||+.||++||||.||++.|+.
T Consensus       246 ---~~~--------~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~  286 (299)
T 4asz_A          246 ---GRV--------LQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQN  286 (299)
T ss_dssp             ---TCC--------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             ---CCC--------CCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence               111        11122345678999999999999999999999999975

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=100.00  E-value=5.3e-53  Score=437.48  Aligned_cols=258  Identities=25%  Similarity=0.365  Sum_probs=211.5

Q ss_pred             cCcceeeeeeCcEEEEEEEeC-----CCCcEEEEEEeccC-chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEE
Q 048419          332 FGEQNLVGSGGFGRVYRGLMP-----SLGLEVAIKRIGHN-SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLV  405 (653)
Q Consensus       332 f~~~~~LG~G~fg~Vy~~~~~-----~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV  405 (653)
                      ++..+.||+|+||+||+|.+.     .+++.||||+++.. .....++|.+|+.++++|+|||||+++|+|.+.+.++||
T Consensus        28 ~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV  107 (308)
T 4gt4_A           28 VRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMI  107 (308)
T ss_dssp             EEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEE
T ss_pred             CeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEEE
Confidence            445788999999999999974     35688999999654 334467899999999999999999999999999999999


Q ss_pred             EeccCCCCchhhhhcccc-----------cccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcE
Q 048419          406 YDYVPNGSLDKLLFDKDH-----------KLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNA  474 (653)
Q Consensus       406 ~E~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~  474 (653)
                      ||||++|+|.++|.....           .....++|.++++|+.|||+||+|||+   ++||||||||+||||++++++
T Consensus       108 ~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDLK~~NILl~~~~~~  184 (308)
T 4gt4_A          108 FSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSS---HHVVHKDLATRNVLVYDKLNV  184 (308)
T ss_dssp             EECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCE
T ss_pred             EEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHh---CCCCCCCccccceEECCCCCE
Confidence            999999999999976431           113469999999999999999999999   899999999999999999999


Q ss_pred             EEEeecCcccccCCCC-CcccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHH
Q 048419          475 KLGDFGLAKIYEHGAN-PQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVK  552 (653)
Q Consensus       475 kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~  552 (653)
                      ||+|||+++....... .......||+.|||||++.++.++.++|||||||+||||+| |+.||......+   +.+.+.
T Consensus       185 Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~---~~~~i~  261 (308)
T 4gt4_A          185 KISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQD---VVEMIR  261 (308)
T ss_dssp             EECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHH---HHHHHH
T ss_pred             EECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHH---HHHHHH
Confidence            9999999987644322 23345679999999999999999999999999999999998 899998654432   222222


Q ss_pred             hhhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcCC
Q 048419          553 ELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLGD  607 (653)
Q Consensus       553 ~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  607 (653)
                      .    +..        ...+..++..+.+|+.+||+.||.+||||.||+++|+.-
T Consensus       262 ~----~~~--------~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~  304 (308)
T 4gt4_A          262 N----RQV--------LPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW  304 (308)
T ss_dssp             T----TCC--------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred             c----CCC--------CCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence            1    111        111223456788999999999999999999999999753

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=100.00  E-value=5.8e-53  Score=435.60  Aligned_cols=262  Identities=27%  Similarity=0.396  Sum_probs=205.8

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC--chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEe
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYD  407 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E  407 (653)
                      +++...+.||+|+||+||+|++.+   .||||+++..  ..+..+.|.+|++++++++|||||+++|+|.+ +.++||||
T Consensus        36 ~~l~l~~~iG~G~fG~Vy~~~~~~---~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmE  111 (307)
T 3omv_A           36 SEVMLSTRIGSGSFGTVYKGKWHG---DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQ  111 (307)
T ss_dssp             TSCCEEEECCCCSSSEEEEEESSS---EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred             HHeEEeeEEeeCCCcEEEEEEECC---cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEE
Confidence            456678899999999999999853   5999998643  45567889999999999999999999999865 56899999


Q ss_pred             ccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccC
Q 048419          408 YVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEH  487 (653)
Q Consensus       408 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~  487 (653)
                      ||++|+|.++|....    ..++|.++++|+.|||+||+|||+   ++||||||||+||||++++++||+|||+|+....
T Consensus       112 y~~gGsL~~~l~~~~----~~l~~~~~~~i~~qia~gL~yLH~---~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~  184 (307)
T 3omv_A          112 WCEGSSLYKHLHVQE----TKFQMFQLIDIARQTAQGMDYLHA---KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSR  184 (307)
T ss_dssp             CCSSCBHHHHHHTSC----CCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCCSSSEEEETTEEEEECCCSSCBC---
T ss_pred             cCCCCCHHHHHhhcC----CCCCHHHHHHHHHHHHHHHHHHHH---CCccCCccCHHHEEECCCCcEEEeeccCceeccc
Confidence            999999999997653    459999999999999999999999   8999999999999999999999999999987654


Q ss_pred             CC-CCcccccccCCcccCcccccc---CCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHh
Q 048419          488 GA-NPQTTHIVGTLGYLAPELTRT---GKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQA  563 (653)
Q Consensus       488 ~~-~~~~~~~~gt~~y~aPE~~~~---~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~  563 (653)
                      .. ........||+.|||||++.+   +.++.++|||||||+||||+||+.||........  +...+......      
T Consensus       185 ~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~--~~~~~~~~~~~------  256 (307)
T 3omv_A          185 WSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQ--IIFMVGRGYAS------  256 (307)
T ss_dssp             ---------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHH--HHHHHHTTCCC------
T ss_pred             CCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHH--HHHHHhcCCCC------
Confidence            32 223445689999999999864   4589999999999999999999999976543221  11112211111      


Q ss_pred             hhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC-CCCCCC
Q 048419          564 IDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG-DSSLPP  612 (653)
Q Consensus       564 ~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~-~~~~p~  612 (653)
                        +.+......++..+.+|+.+||+.||++||||.||+++|+. ..++|.
T Consensus       257 --p~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~lpk  304 (307)
T 3omv_A          257 --PDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLPK  304 (307)
T ss_dssp             --CCSTTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTCCC
T ss_pred             --CCcccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccCCC
Confidence              11112222345678999999999999999999999998864 233443

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=100.00  E-value=2.3e-52  Score=437.25  Aligned_cols=252  Identities=24%  Similarity=0.356  Sum_probs=206.1

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC--chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEe
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYD  407 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E  407 (653)
                      ++|+..+.||+|+||+||+|++..+|+.||||++...  .....+.+.+|+++|++|+|||||++++++.+.+.+|||||
T Consensus        24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE  103 (350)
T 4b9d_A           24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD  103 (350)
T ss_dssp             CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence            5799999999999999999999999999999999654  34456789999999999999999999999999999999999


Q ss_pred             ccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccC
Q 048419          408 YVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEH  487 (653)
Q Consensus       408 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~  487 (653)
                      ||++|+|.++|....   ...+++.+++.++.||+.||+|||+   ++|+||||||+||||+.++.+||+|||+|+....
T Consensus       104 y~~gg~L~~~i~~~~---~~~~~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~  177 (350)
T 4b9d_A          104 YCEGGDLFKRINAQK---GVLFQEDQILDWFVQICLALKHVHD---RKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNS  177 (350)
T ss_dssp             CCTTCBHHHHHHHTT---TCCCCHHHHHHHHHHHHHHHHHHHH---TTCEETTCCGGGEEECTTCCEEECSTTEESCCCH
T ss_pred             CCCCCcHHHHHHHcC---CCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCCHHHEEECCCCCEEEcccccceeecC
Confidence            999999999997643   3457888999999999999999999   9999999999999999999999999999987543


Q ss_pred             CCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhc
Q 048419          488 GANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQT  567 (653)
Q Consensus       488 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~  567 (653)
                      .. ......+||+.|||||++.+..|+.++|||||||+||||+||+.||......+.   ...+..    +...      
T Consensus       178 ~~-~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~---~~~i~~----~~~~------  243 (350)
T 4b9d_A          178 TV-ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNL---VLKIIS----GSFP------  243 (350)
T ss_dssp             HH-HHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH---HHHHHH----TCCC------
T ss_pred             Cc-ccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHH---HHHHHc----CCCC------
Confidence            11 122446799999999999999999999999999999999999999986543221   111111    1110      


Q ss_pred             cCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 048419          568 LDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEF  603 (653)
Q Consensus       568 l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  603 (653)
                        .........+.+|+.+||+.||.+|||+.|++++
T Consensus       244 --~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h  277 (350)
T 4b9d_A          244 --PVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEK  277 (350)
T ss_dssp             --CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             --CCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence              1111234668899999999999999999999874

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=100.00  E-value=1.1e-51  Score=431.55  Aligned_cols=254  Identities=23%  Similarity=0.319  Sum_probs=213.8

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEecc
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYV  409 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~  409 (653)
                      +.|+..+.||+|+||.||+|++..+|+.||||++........+.+.+|+.+|++++|||||++++++.+.+.+|||||||
T Consensus        74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~  153 (346)
T 4fih_A           74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL  153 (346)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence            46888899999999999999999999999999997665555667889999999999999999999999999999999999


Q ss_pred             CCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCC
Q 048419          410 PNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGA  489 (653)
Q Consensus       410 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~  489 (653)
                      ++|+|.+++...      .+++.++..++.||+.||+|||+   ++|+||||||+||||+.++++||+|||+|+.+....
T Consensus       154 ~gg~L~~~l~~~------~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~  224 (346)
T 4fih_A          154 EGGALTDIVTHT------RMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV  224 (346)
T ss_dssp             TTEEHHHHHHHS------CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSS
T ss_pred             CCCcHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHH---CCcccccCCHHHEEECCCCCEEEecCcCceecCCCC
Confidence            999999998643      38999999999999999999999   999999999999999999999999999999765432


Q ss_pred             CCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhccC
Q 048419          490 NPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLD  569 (653)
Q Consensus       490 ~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~  569 (653)
                       ......+||+.|||||++.+..|+.++|||||||++|||++|+.||........   ...+...         ..+.+.
T Consensus       225 -~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~---~~~i~~~---------~~~~~~  291 (346)
T 4fih_A          225 -PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA---MKMIRDN---------LPPRLK  291 (346)
T ss_dssp             -CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH---HHHHHHS---------SCCCCS
T ss_pred             -CcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHH---HHHHHcC---------CCCCCC
Confidence             233456899999999999999999999999999999999999999986543321   1111111         001110


Q ss_pred             cCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          570 YYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       570 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                       ........+.+|+.+||+.||.+|||+.|++++-.-
T Consensus       292 -~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~Hp~~  327 (346)
T 4fih_A          292 -NLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFL  327 (346)
T ss_dssp             -CGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGG
T ss_pred             -ccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHhh
Confidence             011224678899999999999999999999987543

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=100.00  E-value=7.9e-51  Score=423.74  Aligned_cols=251  Identities=24%  Similarity=0.226  Sum_probs=205.2

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEecc
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYV  409 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~  409 (653)
                      +.|...++||+|+||.||+|++..+|+.||||+++....     ..+|+.++++|+|||||++++++.+.+.+|||||||
T Consensus        58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~  132 (336)
T 4g3f_A           58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELL  132 (336)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEecc
Confidence            457778899999999999999999999999999965432     246999999999999999999999999999999999


Q ss_pred             CCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCC-cEEEEeecCcccccCC
Q 048419          410 PNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYL-NAKLGDFGLAKIYEHG  488 (653)
Q Consensus       410 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~-~~kl~DfGla~~~~~~  488 (653)
                      ++|+|.++|...     ..+++.++..++.||+.||+|||+   ++|+||||||+||||+.++ .+||+|||+|+.+...
T Consensus       133 ~gg~L~~~l~~~-----~~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~  204 (336)
T 4g3f_A          133 EGGSLGQLIKQM-----GCLPEDRALYYLGQALEGLEYLHT---RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPD  204 (336)
T ss_dssp             TTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCCGGGEEECTTSCCEEECCCTTCEEC---
T ss_pred             CCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCC
Confidence            999999999764     358999999999999999999999   9999999999999999987 6999999999976543


Q ss_pred             CCC----cccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhh
Q 048419          489 ANP----QTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAI  564 (653)
Q Consensus       489 ~~~----~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  564 (653)
                      ...    .....+||+.|||||++.+..++.++|||||||++|||+||+.||........  + ..+...  ...     
T Consensus       205 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~--~-~~i~~~--~~~-----  274 (336)
T 4g3f_A          205 GLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPL--C-LKIASE--PPP-----  274 (336)
T ss_dssp             ---------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCC--H-HHHHHS--CCG-----
T ss_pred             CcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHH--H-HHHHcC--CCC-----
Confidence            211    12235799999999999999999999999999999999999999976443211  1 111110  000     


Q ss_pred             hhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          565 DQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       565 d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                         +...+......+.+++.+||+.||.+|||+.|++++|..
T Consensus       275 ---~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~  313 (336)
T 4g3f_A          275 ---IREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGK  313 (336)
T ss_dssp             ---GGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             ---chhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHH
Confidence               011122335678899999999999999999999998853

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=100.00  E-value=2e-50  Score=413.59  Aligned_cols=247  Identities=25%  Similarity=0.375  Sum_probs=201.2

Q ss_pred             CcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC--chhhHHHHHHHHHHHhhcCCCceeeeeeeecc----cceeEEEE
Q 048419          333 GEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRK----QDELLLVY  406 (653)
Q Consensus       333 ~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~----~~~~~lV~  406 (653)
                      ...+.||+|+||.||+|.+..++..||||++...  .....+.|.+|++++++|+|||||+++++|.+    .+.++|||
T Consensus        29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm  108 (290)
T 3fpq_A           29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT  108 (290)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred             EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence            5567899999999999999999999999999643  44456789999999999999999999999865    35689999


Q ss_pred             eccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCC--eEecCCCCCcEEEcC-CCcEEEEeecCcc
Q 048419          407 DYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQR--VVHRDVKPSNILLDT-YLNAKLGDFGLAK  483 (653)
Q Consensus       407 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~--ivH~Dlkp~NIll~~-~~~~kl~DfGla~  483 (653)
                      |||++|+|.++|...     ..+++..+..++.||++||+|||+   ++  |+||||||+||||+. ++.+||+|||+|+
T Consensus       109 Ey~~gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~ylH~---~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~  180 (290)
T 3fpq_A          109 ELMTSGTLKTYLKRF-----KVMKIKVLRSWCRQILKGLQFLHT---RTPPIIHRDLKCDNIFITGPTGSVKIGDLGLAT  180 (290)
T ss_dssp             ECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHT---SSSCCCCCCCCGGGEEESSTTSCEEECCTTGGG
T ss_pred             eCCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCCCEEecccChhheeEECCCCCEEEEeCcCCE
Confidence            999999999999754     358999999999999999999999   66  999999999999974 7999999999998


Q ss_pred             cccCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHh
Q 048419          484 IYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQA  563 (653)
Q Consensus       484 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~  563 (653)
                      ....   ......+||+.|||||++.+ +++.++|||||||+||||+||+.||........  +...+.    .+.....
T Consensus       181 ~~~~---~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~--~~~~i~----~~~~~~~  250 (290)
T 3fpq_A          181 LKRA---SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQ--IYRRVT----SGVKPAS  250 (290)
T ss_dssp             GCCT---TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHH--HHHHHT----TTCCCGG
T ss_pred             eCCC---CccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHH--HHHHHH----cCCCCCC
Confidence            6432   23345689999999999865 699999999999999999999999975433221  111111    1111111


Q ss_pred             hhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          564 IDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       564 ~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                      .++       ...+.+.+|+.+||+.||.+|||+.|++++-
T Consensus       251 ~~~-------~~~~~~~~li~~~L~~dP~~R~s~~e~l~Hp  284 (290)
T 3fpq_A          251 FDK-------VAIPEVKEIIEGCIRQNKDERYSIKDLLNHA  284 (290)
T ss_dssp             GGG-------CCCHHHHHHHHHHSCSSGGGSCCHHHHHTSG
T ss_pred             CCc-------cCCHHHHHHHHHHccCChhHCcCHHHHhcCc
Confidence            111       1134688999999999999999999999864

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=100.00  E-value=3.8e-51  Score=421.15  Aligned_cols=248  Identities=23%  Similarity=0.294  Sum_probs=209.9

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC---chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN---SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVY  406 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  406 (653)
                      ++|+..+.||+|+||+||+|++..+|+.||||++.+.   .....+.+.+|+++|++|+|||||++++++.+.+.+||||
T Consensus        32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm  111 (311)
T 4aw0_A           32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL  111 (311)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            4588999999999999999999999999999999653   2344678999999999999999999999999999999999


Q ss_pred             eccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccccc
Q 048419          407 DYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE  486 (653)
Q Consensus       407 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~  486 (653)
                      |||++|+|.++|...     ..+++.+...++.||+.||+|||+   ++|+||||||+||||+.++.+||+|||+|+.+.
T Consensus       112 Ey~~gG~L~~~i~~~-----~~l~e~~~~~~~~qi~~al~ylH~---~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~  183 (311)
T 4aw0_A          112 SYAKNGELLKYIRKI-----GSFDETCTRFYTAEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLS  183 (311)
T ss_dssp             CCCTTEEHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred             ecCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCCHHHeEEcCCCCEEEEEcCCceecC
Confidence            999999999999764     348999999999999999999999   999999999999999999999999999999775


Q ss_pred             CCC-CCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhh
Q 048419          487 HGA-NPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAID  565 (653)
Q Consensus       487 ~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d  565 (653)
                      ... .......+||+.|||||++.+..++.++||||+||++|||+||+.||.......   +...+..    +..     
T Consensus       184 ~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~---~~~~i~~----~~~-----  251 (311)
T 4aw0_A          184 PESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGL---IFAKIIK----LEY-----  251 (311)
T ss_dssp             TTTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHHHHHH----TCC-----
T ss_pred             CCCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHc----CCC-----
Confidence            432 233455789999999999999999999999999999999999999998654322   1111111    100     


Q ss_pred             hccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHH
Q 048419          566 QTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVV  601 (653)
Q Consensus       566 ~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  601 (653)
                          .++......+.+|+.+||+.||.+|||+.|++
T Consensus       252 ----~~p~~~s~~~~dli~~lL~~dp~~R~t~~e~~  283 (311)
T 4aw0_A          252 ----DFPEKFFPKARDLVEKLLVLDATKRLGCEEME  283 (311)
T ss_dssp             ----CCCTTCCHHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred             ----CCCcccCHHHHHHHHHHccCCHhHCcChHHHc
Confidence                01112245688999999999999999999864

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=100.00  E-value=1.5e-50  Score=433.20  Aligned_cols=254  Identities=23%  Similarity=0.319  Sum_probs=214.5

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEecc
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYV  409 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~  409 (653)
                      +.|+..+.||+|+||.||+|++..+|+.||||++........+.+.+|+.+|++|+|||||++++++.+.+.+|||||||
T Consensus       151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~  230 (423)
T 4fie_A          151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL  230 (423)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCC
Confidence            56888999999999999999999999999999997765556677899999999999999999999999999999999999


Q ss_pred             CCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCC
Q 048419          410 PNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGA  489 (653)
Q Consensus       410 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~  489 (653)
                      ++|+|.+++...      .+++.++..++.||+.||+|||+   ++|+||||||+||||+.++.+||+|||+|+.+....
T Consensus       231 ~gG~L~~~i~~~------~l~e~~~~~~~~qil~aL~ylH~---~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~  301 (423)
T 4fie_A          231 EGGALTDIVTHT------RMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV  301 (423)
T ss_dssp             TTEEHHHHHHHS------CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSC
T ss_pred             CCCcHHHHHhcc------CCCHHHHHHHHHHHHHHHHHHHH---CCeecccCCHHHEEEcCCCCEEEecCccceECCCCC
Confidence            999999998643      38999999999999999999999   999999999999999999999999999999765432


Q ss_pred             CCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhccC
Q 048419          490 NPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLD  569 (653)
Q Consensus       490 ~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~  569 (653)
                       ......+||+.|||||++.+..|+.++|||||||++|||++|+.||........   ...+...         ..+.+.
T Consensus       302 -~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~---~~~i~~~---------~~~~~~  368 (423)
T 4fie_A          302 -PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA---MKMIRDN---------LPPRLK  368 (423)
T ss_dssp             -CCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH---HHHHHHS---------CCCCCS
T ss_pred             -ccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHH---HHHHHcC---------CCCCCc
Confidence             233456899999999999999999999999999999999999999986544321   1111111         011110


Q ss_pred             cCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          570 YYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       570 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                       ........+.+|+.+||+.||.+|||+.|++++-.-
T Consensus       369 -~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~Hp~~  404 (423)
T 4fie_A          369 -NLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFL  404 (423)
T ss_dssp             -CTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGG
T ss_pred             -ccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHHh
Confidence             011224678899999999999999999999986543

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=100.00  E-value=1.7e-50  Score=410.54  Aligned_cols=255  Identities=24%  Similarity=0.391  Sum_probs=198.1

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC---chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN---SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVY  406 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  406 (653)
                      ++|+..+.||+|+||+||+|++..+|+.||||++...   .....+.+.+|++++++++|||||++++++.+.+.+|+||
T Consensus        13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm   92 (275)
T 3hyh_A           13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI   92 (275)
T ss_dssp             -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence            5799999999999999999999999999999999654   2334567899999999999999999999999999999999


Q ss_pred             eccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccccc
Q 048419          407 DYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE  486 (653)
Q Consensus       407 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~  486 (653)
                      ||| +|+|.+++...     ..+++.++..++.||+.||+|||+   ++|+||||||+||||++++++||+|||+|+...
T Consensus        93 Ey~-~g~L~~~l~~~-----~~l~e~~~~~~~~qi~~al~ylH~---~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~  163 (275)
T 3hyh_A           93 EYA-GNELFDYIVQR-----DKMSEQEARRFFQQIISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMT  163 (275)
T ss_dssp             ECC-CEEHHHHHHHS-----CSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCTTTEEECTTCCEEECCSSCC----
T ss_pred             eCC-CCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCChHHeEECCCCCEEEeecCCCeecC
Confidence            999 68999998764     348999999999999999999999   999999999999999999999999999998754


Q ss_pred             CCCCCcccccccCCcccCccccccCCC-CCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhh
Q 048419          487 HGANPQTTHIVGTLGYLAPELTRTGKA-TTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAID  565 (653)
Q Consensus       487 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d  565 (653)
                      ...  .....+||+.|+|||++.+..+ +.++||||+||++|||+||+.||.......   +...+..    +..     
T Consensus       164 ~~~--~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~---~~~~i~~----~~~-----  229 (275)
T 3hyh_A          164 DGN--FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPV---LFKNISN----GVY-----  229 (275)
T ss_dssp             -------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHHHHHH----TCC-----
T ss_pred             CCC--ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHH---HHHHHHc----CCC-----
Confidence            322  2344689999999999988776 579999999999999999999998654321   1111111    100     


Q ss_pred             hccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcCCCCCC
Q 048419          566 QTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLGDSSLP  611 (653)
Q Consensus       566 ~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~p  611 (653)
                          ..+......+.+|+.+||+.||.+|||+.|++++-.-...+|
T Consensus       230 ----~~p~~~s~~~~~li~~~L~~dP~~R~s~~eil~hpw~k~~~p  271 (275)
T 3hyh_A          230 ----TLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKVDLP  271 (275)
T ss_dssp             ----CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHCHHHHTTCC
T ss_pred             ----CCCCCCCHHHHHHHHHHccCChhHCcCHHHHHcCcccccCCC
Confidence                011112456889999999999999999999998655444444

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=100.00  E-value=2.4e-50  Score=424.93  Aligned_cols=261  Identities=24%  Similarity=0.363  Sum_probs=211.5

Q ss_pred             hcCcCcceeeeeeCcEEEEEEEeCCC-----CcEEEEEEeccCc-hhhHHHHHHHHHHHhhcCC-Cceeeeeeeeccc-c
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGLMPSL-----GLEVAIKRIGHNS-QQGMKEFVAEIMSMGRLRH-RNLVQLHGWCRKQ-D  400 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~~~~~-----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H-~niv~l~g~~~~~-~  400 (653)
                      .++|+..+.||+|+||.||+|.+.+.     ++.||||++.... ....+.|.+|+.+|++++| ||||+++|+|.+. +
T Consensus        63 ~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~  142 (353)
T 4ase_A           63 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG  142 (353)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTS
T ss_pred             HHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCC
Confidence            46788899999999999999987543     3689999997653 3456789999999999975 8999999999765 5


Q ss_pred             eeEEEEeccCCCCchhhhhccccc-----------ccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEc
Q 048419          401 ELLLVYDYVPNGSLDKLLFDKDHK-----------LRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLD  469 (653)
Q Consensus       401 ~~~lV~E~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~  469 (653)
                      .++||||||++|+|.++|+.....           ....++|.+++.++.|||+||+|||+   ++||||||||+||||+
T Consensus       143 ~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~---~~iiHRDLK~~NILl~  219 (353)
T 4ase_A          143 PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLS  219 (353)
T ss_dssp             CCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEC
T ss_pred             EEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhh---CCeecCccCccceeeC
Confidence            689999999999999999764321           13458999999999999999999999   9999999999999999


Q ss_pred             CCCcEEEEeecCcccccCCCCC-cccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHH
Q 048419          470 TYLNAKLGDFGLAKIYEHGANP-QTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLL  547 (653)
Q Consensus       470 ~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l  547 (653)
                      +++.+||+|||+|+........ ......||+.|||||++.+..++.++|||||||+||||+| |+.||........  +
T Consensus       220 ~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~--~  297 (353)
T 4ase_A          220 EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE--F  297 (353)
T ss_dssp             GGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH--H
T ss_pred             CCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHHH--H
Confidence            9999999999999976544332 3345678999999999999999999999999999999998 8999976443221  1


Q ss_pred             HHHHHhhhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          548 VDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       548 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                      ...+..    +.       ++ ..+......+.+++.+||+.||.+|||+.||+++|+.
T Consensus       298 ~~~i~~----g~-------~~-~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~  344 (353)
T 4ase_A          298 CRRLKE----GT-------RM-RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGN  344 (353)
T ss_dssp             HHHHHH----TC-------CC-CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHHHc----CC-------CC-CCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHH
Confidence            111111    11       01 1112234678899999999999999999999999853

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=100.00  E-value=1.3e-50  Score=420.03  Aligned_cols=264  Identities=27%  Similarity=0.332  Sum_probs=198.3

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccc----eeEEE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQD----ELLLV  405 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~----~~~lV  405 (653)
                      +++...+.||+|+||+||+|++.  |+.||||++..... ....+..|+..+.+++|||||+++++|.+.+    .++||
T Consensus         3 r~i~L~~~iG~G~fG~Vy~~~~~--g~~VAvK~l~~~~~-~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV   79 (303)
T 3hmm_A            3 RTIVLQESIGKGRFGEVWRGKWR--GEEVAVKIFSSREE-RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV   79 (303)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEET--TEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred             cEEEEEEEEeeCCCeEEEEEEEC--CEEEEEEEECccch-hhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEE
Confidence            45677899999999999999984  78999999964432 2223345777778899999999999998764    57999


Q ss_pred             EeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcC-----CCCeEecCCCCCcEEEcCCCcEEEEeec
Q 048419          406 YDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEEC-----NQRVVHRDVKPSNILLDTYLNAKLGDFG  480 (653)
Q Consensus       406 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~-----~~~ivH~Dlkp~NIll~~~~~~kl~DfG  480 (653)
                      ||||++|+|.++|+..      .++|+++++++.|+++||+|||+.+     .++|+||||||+||||+.++++||+|||
T Consensus        80 ~Ey~~~gsL~~~l~~~------~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFG  153 (303)
T 3hmm_A           80 SDYHEHGSLFDYLNRY------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLG  153 (303)
T ss_dssp             EECCTTCBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCT
T ss_pred             ecCCCCCcHHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCC
Confidence            9999999999999654      3899999999999999999999831     2499999999999999999999999999


Q ss_pred             CcccccCCCCC---cccccccCCcccCccccccC------CCCCccceeehHHHHHHHHhCCCCCChhhhhhH----H--
Q 048419          481 LAKIYEHGANP---QTTHIVGTLGYLAPELTRTG------KATTSTDVYSYGILMLEVACGRRSIEPQKAAAE----L--  545 (653)
Q Consensus       481 la~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~------~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~----~--  545 (653)
                      +++........   ......||+.|||||++.+.      .++.++|||||||+||||+||+.|+........    .  
T Consensus       154 la~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~  233 (303)
T 3hmm_A          154 LAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVP  233 (303)
T ss_dssp             TCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSC
T ss_pred             CCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhccc
Confidence            99876543321   22345799999999998754      467899999999999999999877643221100    0  


Q ss_pred             --HHHHHHHhhhcccchhHhhhhcc--CcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          546 --LLVDWVKELHLEGEITQAIDQTL--DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       546 --~l~~~~~~~~~~~~~~~~~d~~l--~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                        ...+.+......    +.+++.+  .....+....+.+|+.+||+.||.+||||.||++.|+.
T Consensus       234 ~~~~~~~~~~~~~~----~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~  294 (303)
T 3hmm_A          234 SDPSVEEMRKVVCE----QKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQ  294 (303)
T ss_dssp             SSCCHHHHHHHHTT----SCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHH
T ss_pred             ccchHHHHHHHHhc----ccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHH
Confidence              000001110000    0111112  11223566789999999999999999999999999864

>2ltn_A PEA lectin, alpha chain; 1.70A {Pisum sativum} SCOP: b.29.1.1 PDB: 1bqp_A* 1hkd_A 1ofs_A* 1rin_A* 1lof_C* 1len_A 1lem_A 1les_A* 2lal_A 1loe_A 1loa_A* 1loc_A* 1lod_A* 1lob_A 1lof_A* 1log_A* 1lgc_A* 1lgb_A* 2b7y_A*

Probab=100.00  E-value=1.2e-48  Score=366.27  Aligned_cols=175  Identities=28%  Similarity=0.448  Sum_probs=159.1

Q ss_pred             CceeEEeCCCC--CCCeEEecceEecCCCcEEecCCCCCceEEEEcCCCeecccCCCCceeeeEEEEEEEEecCCCCCCC
Q 048419            7 DTTSFLYNGFL--HANLSLEGAAYISTSGILTVTNKSEGLIGHALYPNPLRFKTSNKSVAIDFRTNFVFSILPKYPDLGG   84 (653)
Q Consensus         7 ~~~~f~~~~f~--~~~l~~~g~a~~~~~g~l~Lt~~~~~~~Gr~~y~~pi~~~~~~~~~~~sF~t~F~f~i~~~~~~~~g   84 (653)
                      .+++|+|+.|.  ..+|+|+|+|+ .++|.|+||+....++|||+|++||+||++.+++++||+|+|+|.|.+.+...+|
T Consensus         2 ~~~sF~f~~F~~~~~~l~l~G~A~-~~~g~l~LT~~~~~~~Gra~y~~Pv~l~d~~tg~vaSFsT~F~F~I~~~~~~~~g   80 (181)
T 2ltn_A            2 ETTSFLITKFSPDQQNLIFQGDGY-TTKEKLTLTKAVKNTVGRALYSSPIHIWDRETGNVANFVTSFTFVINAPNSYNVA   80 (181)
T ss_dssp             EEEEEEESSCCSSCTTEEEEETCE-ECSSSEEEECSCSSCEEEEEESSCEECBCTTTCCBCEEEEEEEEEEECSSTTSCC
T ss_pred             cceEEEcCCCCCCCCCEEEecccc-CCCCCeEcCCCCCCCEEEEEECCCEEeecCCCCCccceEEEEEEEEecCCCCCCC
Confidence            46899999998  68999999999 6789999999999999999999999999999999999999999999987777799


Q ss_pred             CceEEEEecCCCCCCCCCCccccCCCcccCCCCCCCCceEEEEeecccccccCCCC--CCeeeEecCCCCcCCcccCccc
Q 048419           85 QGLAFIIISTNRPENCLANQFLGLPNITMSSSTKFSTRMLAVEFDIIQNTELIDIN--DNHVGIDISSLISSASEPASYY  162 (653)
Q Consensus        85 dGlaF~l~~~~~~~~~~~g~~lG~~~~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~--~~Hvgid~ns~~s~~~~~~~~~  162 (653)
                      |||||||+|....|. +.|+||||+|.++   ++..+|+|||||||++|.+ |||+  +|||||||||+.|.++++|   
T Consensus        81 dGlAF~l~p~~~~p~-~~g~~LGL~n~~~---~~~~n~~vAVEFDT~~n~~-~Dp~~~~nHVGIdvNs~~S~~t~~~---  152 (181)
T 2ltn_A           81 DGFTFFIAPVDTKPQ-TGGGYLGVFNSAE---YDKTTQTVAVEFDTFYNAA-WDPSNRDRHIGIDVNSIKSVNTKSW---  152 (181)
T ss_dssp             CEEEEEEEETTCCCC-CCGGGTTTCSCSS---CCTTSCCEEEEEECSCCTT-TSCTTCCCEEEEEESSSSCSEEEEC---
T ss_pred             CceEEEEecCCCCCC-CCCccccccccCC---CCccccEEEEEeccccccc-cCCCCCCCEEEEEcCCccccceecc---
Confidence            999999999876665 7899999998753   4667899999999999988 6999  9999999999999988775   


Q ss_pred             cCCCCccccccCCCCceEEEEEecCCceEEEEEEeeC
Q 048419          163 SGNNHRIPILLRSGDPIQAWVDYSSQEMLINVSICPL  199 (653)
Q Consensus       163 ~~~~~~~~~~l~~g~~~~~~I~Y~~~~~~l~v~~~~~  199 (653)
                               +|.+|+.++|||+||+.+++|+|+|.+.
T Consensus       153 ---------~l~~G~~~~v~I~Yd~~~~~L~V~l~~~  180 (181)
T 2ltn_A          153 ---------KLQNGEEANVVIAFNAATNVLTVSLTYP  180 (181)
T ss_dssp             ---------CCCTTCCEEEEEEEETTTTEEEEEEEEC
T ss_pred             ---------ccCCCCEEEEEEEEECCCCEEEEEEecC
Confidence                     3579999999999999999999999763

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=100.00  E-value=5.7e-50  Score=412.30  Aligned_cols=250  Identities=24%  Similarity=0.307  Sum_probs=199.2

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeC---CCCcEEEEEEeccCc--hhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMP---SLGLEVAIKRIGHNS--QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLL  404 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~---~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  404 (653)
                      ++|+..+.||+|+||+||+|+..   .+++.||||++....  ......+.+|+++|++++|||||++++++.+.+.+||
T Consensus        24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i  103 (304)
T 3ubd_A           24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL  103 (304)
T ss_dssp             GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred             cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence            46899999999999999999873   457899999996542  2233468889999999999999999999999999999


Q ss_pred             EEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccc
Q 048419          405 VYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKI  484 (653)
Q Consensus       405 V~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~  484 (653)
                      |||||++|+|.++|...     ..+++.++..++.||+.||+|||+   ++|+||||||+|||++.++.+||+|||+|+.
T Consensus       104 vmEy~~gg~L~~~l~~~-----~~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFGla~~  175 (304)
T 3ubd_A          104 ILDFLRGGDLFTRLSKE-----VMFTEEDVKFYLAELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKE  175 (304)
T ss_dssp             EECCCTTCEEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECTTSCEEEESSEEEEC
T ss_pred             EEEcCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHHHeEEcCCCCEEeccccccee
Confidence            99999999999999764     358999999999999999999999   9999999999999999999999999999986


Q ss_pred             ccCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhh
Q 048419          485 YEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAI  564 (653)
Q Consensus       485 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  564 (653)
                      ..... ......+||+.|||||++.+..++.++||||+||++|||+||+.||...+..+.   ...+..    +.     
T Consensus       176 ~~~~~-~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~---~~~i~~----~~-----  242 (304)
T 3ubd_A          176 SIDHE-KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKET---MTMILK----AK-----  242 (304)
T ss_dssp             ------CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH---HHHHHH----CC-----
T ss_pred             ccCCC-ccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHH---HHHHHc----CC-----
Confidence            54322 223446899999999999999999999999999999999999999986544321   111111    00     


Q ss_pred             hhccCcCCHHHHHHHHHHHHHcCCCCCCCCCC-----HHHHHHHH
Q 048419          565 DQTLDYYDLAEAELVLNLGLFCSAPNPVYRPD-----MRRVVEFL  604 (653)
Q Consensus       565 d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs-----~~evl~~L  604 (653)
                         . .++......+.+|+.+||+.||.+|||     ++|++++-
T Consensus       243 ---~-~~p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~Hp  283 (304)
T 3ubd_A          243 ---L-GMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHS  283 (304)
T ss_dssp             ---C-CCCTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTSG
T ss_pred             ---C-CCCCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcCc
Confidence               0 011123456889999999999999998     56777643

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=100.00  E-value=5.2e-49  Score=406.30  Aligned_cols=253  Identities=22%  Similarity=0.343  Sum_probs=193.3

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc-hhhHHHHHHHHHHHhhcCCCceeeeeeeecccc--------
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS-QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQD--------  400 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~--------  400 (653)
                      ++|+..+.||+|+||.||+|++..+|+.||||++.... ....+.+.+|+++|++|+|||||++++++.+.+        
T Consensus         5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~   84 (299)
T 4g31_A            5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS   84 (299)
T ss_dssp             HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred             hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence            35888999999999999999999999999999997554 344567999999999999999999999986544        


Q ss_pred             ----eeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEE
Q 048419          401 ----ELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKL  476 (653)
Q Consensus       401 ----~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl  476 (653)
                          .+|+|||||++|+|.+++.....  ....++..++.++.||++||+|||+   ++|+||||||+||||+.++.+||
T Consensus        85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~--~~~~~~~~~~~i~~qi~~al~ylH~---~~IiHRDlKp~NILl~~~~~vKl  159 (299)
T 4g31_A           85 SPKVYLYIQMQLCRKENLKDWMNGRCT--IEERERSVCLHIFLQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKV  159 (299)
T ss_dssp             --CEEEEEEEECCCSCCHHHHHHTCCS--GGGSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEE
T ss_pred             CCCcEEEEEEecCCCCcHHHHHHhcCC--CChhHHHHHHHHHHHHHHHHHHHHH---CcCccccCcHHHeEECCCCcEEE
Confidence                37999999999999999976542  2334566788999999999999999   99999999999999999999999


Q ss_pred             EeecCcccccCCCCC-----------cccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHH
Q 048419          477 GDFGLAKIYEHGANP-----------QTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAEL  545 (653)
Q Consensus       477 ~DfGla~~~~~~~~~-----------~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~  545 (653)
                      +|||+|+........           ..+..+||+.|||||++.+..++.++|||||||++|||++   ||....+..  
T Consensus       160 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~~~--  234 (299)
T 4g31_A          160 GDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMERV--  234 (299)
T ss_dssp             CCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHHHH--
T ss_pred             ccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccHHH--
Confidence            999999876543221           1233579999999999999999999999999999999996   776432211  


Q ss_pred             HHHHHHHhhhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          546 LLVDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       546 ~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                      .....+.    ........        ......+.+|+.+||+.||.+|||+.|++++-
T Consensus       235 ~~~~~~~----~~~~p~~~--------~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~  281 (299)
T 4g31_A          235 RTLTDVR----NLKFPPLF--------TQKYPCEYVMVQDMLSPSPMERPEAINIIENA  281 (299)
T ss_dssp             HHHHHHH----TTCCCHHH--------HHHCHHHHHHHHHHTCSSGGGSCCHHHHHTSG
T ss_pred             HHHHHHh----cCCCCCCC--------cccCHHHHHHHHHHcCCChhHCcCHHHHhcCH
Confidence            1111111    11111111        12234567899999999999999999999854

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=100.00  E-value=2.5e-46  Score=400.95  Aligned_cols=269  Identities=23%  Similarity=0.298  Sum_probs=208.2

Q ss_pred             hcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC--chhhHHHHHHHHHHHhhcCCCceeeeeeeecc------cc
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRK------QD  400 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~------~~  400 (653)
                      .++|+..+.||+|+||.||+|++..+|+.||||++...  .....+.+.+|+++|++|+|||||++++++..      .+
T Consensus        53 ~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~  132 (398)
T 4b99_A           53 GDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFK  132 (398)
T ss_dssp             CSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCC
T ss_pred             CCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCC
Confidence            46799999999999999999999999999999999654  33445678899999999999999999998754      35


Q ss_pred             eeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeec
Q 048419          401 ELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFG  480 (653)
Q Consensus       401 ~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG  480 (653)
                      .+|||||||+ |+|.+++...     ..+++.++..++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||
T Consensus       133 ~~~ivmE~~~-g~L~~~i~~~-----~~l~~~~~~~~~~qil~al~ylH~---~~iiHRDlKP~NIl~~~~~~~Ki~DFG  203 (398)
T 4b99_A          133 SVYVVLDLME-SDLHQIIHSS-----QPLTLEHVRYFLYQLLRGLKYMHS---AQVIHRDLKPSNLLVNENCELKIGDFG  203 (398)
T ss_dssp             CEEEEEECCS-EEHHHHHTSS-----SCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTCCEEECCCT
T ss_pred             EEEEEEeCCC-CCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CcCcCCCcCccccccCCCCCEEEeecc
Confidence            7899999995 6899998764     359999999999999999999999   999999999999999999999999999


Q ss_pred             CcccccCCC---CCcccccccCCcccCccccccC-CCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhc
Q 048419          481 LAKIYEHGA---NPQTTHIVGTLGYLAPELTRTG-KATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHL  556 (653)
Q Consensus       481 la~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~-~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~  556 (653)
                      +++.+....   .......+||+.|+|||++.+. .++.++||||+||++|||++|+.||......+.............
T Consensus       204 la~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~  283 (398)
T 4b99_A          204 MARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPS  283 (398)
T ss_dssp             TCBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCC
T ss_pred             eeeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCC
Confidence            998764321   1233456899999999998765 568999999999999999999999987654433221111110000


Q ss_pred             cc--------chhHhhhhcc--CcCCHH-----HHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          557 EG--------EITQAIDQTL--DYYDLA-----EAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       557 ~~--------~~~~~~d~~l--~~~~~~-----~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                      ..        .....+....  ...+..     ....+.+|+.+||+.||.+|||+.|++++-.-
T Consensus       284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f  348 (398)
T 4b99_A          284 PAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFL  348 (398)
T ss_dssp             GGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGG
T ss_pred             hHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcCHhh
Confidence            00        0000000000  001111     23568899999999999999999999987644

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=100.00  E-value=9.4e-46  Score=387.90  Aligned_cols=293  Identities=38%  Similarity=0.720  Sum_probs=248.5

Q ss_pred             CCcccCHHHHHHhhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCch-hhHHHHHHHHHHHhhcCCCceeeeee
Q 048419          316 GARRFKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQ-QGMKEFVAEIMSMGRLRHRNLVQLHG  394 (653)
Q Consensus       316 ~~~~f~~~el~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g  394 (653)
                      ....|++.++..++++|...+.||+|+||.||+|... +++.||||++..... .....+.+|+.++++++||||+++++
T Consensus        16 ~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~   94 (326)
T 3uim_A           16 QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLA-DGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRG   94 (326)
T ss_dssp             CCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCS-SSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCE
T ss_pred             ccceecHHHHHHHhhccccceeEecCCCcEEEEEEec-CCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEE
Confidence            3568999999999999999999999999999999865 588999999865432 22336889999999999999999999


Q ss_pred             eecccceeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcE
Q 048419          395 WCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNA  474 (653)
Q Consensus       395 ~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~  474 (653)
                      +|...+..++||||+++|+|.+++...... ...++|..++.++.|++.||.|||+.+..+|+||||||+|||++.++.+
T Consensus        95 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~  173 (326)
T 3uim_A           95 FCMTPTERLLVYPYMANGSVASCLRERPES-QPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEA  173 (326)
T ss_dssp             EECCSSCCEEEEECCTTCBHHHHHHCCSTT-CCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCE
T ss_pred             EEecCCceEEEEEeccCCCHHHHHHhcccc-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCE
Confidence            999999999999999999999999875432 4558999999999999999999999333399999999999999999999


Q ss_pred             EEEeecCcccccCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhh--hHHHHHHHHH
Q 048419          475 KLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAA--AELLLVDWVK  552 (653)
Q Consensus       475 kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~--~~~~l~~~~~  552 (653)
                      ||+|||+++..............||+.|+|||.+.+..++.++|||||||++|||++|+.||......  ......+|+.
T Consensus       174 kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~  253 (326)
T 3uim_A          174 VVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVK  253 (326)
T ss_dssp             EECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHT
T ss_pred             EeccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHH
Confidence            99999999877654444445567999999999998889999999999999999999999999754322  2334566777


Q ss_pred             hhhcccchhHhhhhcc-CcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcCCCCC
Q 048419          553 ELHLEGEITQAIDQTL-DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLGDSSL  610 (653)
Q Consensus       553 ~~~~~~~~~~~~d~~l-~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~  610 (653)
                      .......+....+..+ ..........+.+++.+||+.||.+|||+.||+++|++....
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~~~  312 (326)
T 3uim_A          254 GLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGLA  312 (326)
T ss_dssp             TTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSSCS
T ss_pred             HHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcchh
Confidence            7666666667666666 566778889999999999999999999999999999986443

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=100.00  E-value=1.3e-45  Score=386.20  Aligned_cols=286  Identities=36%  Similarity=0.616  Sum_probs=240.6

Q ss_pred             CcccCHHHHHHhhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeee
Q 048419          317 ARRFKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWC  396 (653)
Q Consensus       317 ~~~f~~~el~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~  396 (653)
                      ..++++.++..++++|+..+.||+|+||.||+|.+. +++.||||++........+.+.+|+.++++++||||++++++|
T Consensus        26 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~  104 (321)
T 2qkw_B           26 SYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLR-DGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFC  104 (321)
T ss_dssp             ----CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECT-TCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEEC
T ss_pred             ceeecHHHHHHHHhccCccceeecCCCeeEEEEEEC-CCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence            345677778889999999999999999999999975 5889999999777667788899999999999999999999999


Q ss_pred             cccceeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEE
Q 048419          397 RKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKL  476 (653)
Q Consensus       397 ~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl  476 (653)
                      .+.+..++||||+++|+|.+++...... ...++|.+++.++.|+++||.|||+   ++|+||||||+||+++.++.+||
T Consensus       105 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl  180 (321)
T 2qkw_B          105 DERNEMILIYKYMENGNLKRHLYGSDLP-TMSMSWEQRLEICIGAARGLHYLHT---RAIIHRDVKSINILLDENFVPKI  180 (321)
T ss_dssp             CCTTCCEEEEECCTTCBTGGGSSSSCCC-SCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCSTTEEECTTCCEEE
T ss_pred             cCCCeEEEEEEcCCCCcHHHHHhccCCC-ccccCHHHHHHHHHHHHHHHHHhcC---CCeecCCCCHHHEEECCCCCEEE
Confidence            9999999999999999999999765321 3458999999999999999999999   89999999999999999999999


Q ss_pred             EeecCcccccCCC-CCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhh
Q 048419          477 GDFGLAKIYEHGA-NPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELH  555 (653)
Q Consensus       477 ~DfGla~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~  555 (653)
                      +|||+++...... ........||+.|+|||.+.+..++.++|||||||++|||++|+.||.............|.....
T Consensus       181 ~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~  260 (321)
T 2qkw_B          181 TDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESH  260 (321)
T ss_dssp             CCCTTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHH
T ss_pred             eecccccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhcc
Confidence            9999998654322 222334568999999999988899999999999999999999999998655443334455555555


Q ss_pred             cccchhHhhhhcc-CcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcCC
Q 048419          556 LEGEITQAIDQTL-DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLGD  607 (653)
Q Consensus       556 ~~~~~~~~~d~~l-~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  607 (653)
                      ..+.+...+++.+ ..........+.+++.+||+.||.+|||+.||+++|+..
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~  313 (321)
T 2qkw_B          261 NNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYA  313 (321)
T ss_dssp             TTTCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             ccccHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence            5555556666655 455677889999999999999999999999999999753

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=100.00  E-value=6.6e-45  Score=385.68  Aligned_cols=265  Identities=22%  Similarity=0.282  Sum_probs=201.3

Q ss_pred             HhhcCcCcceeeeeeCcEEEEEEEeC---CCCcEEEEEEeccCchhhHHHHHHHHHHHhhc-CCCceeeeeeeeccccee
Q 048419          327 SVTKGFGEQNLVGSGGFGRVYRGLMP---SLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRL-RHRNLVQLHGWCRKQDEL  402 (653)
Q Consensus       327 ~at~~f~~~~~LG~G~fg~Vy~~~~~---~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~  402 (653)
                      ...++|+..+.||+|+||+||+|+++   .+++.||||++....  ....+.+|+++|+++ +||||+++++++.+.+.+
T Consensus        18 ~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~   95 (361)
T 4f9c_A           18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHV   95 (361)
T ss_dssp             GGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEE
T ss_pred             CccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEE
Confidence            45688999999999999999999864   457899999986543  345678999999998 699999999999999999


Q ss_pred             EEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCC-CcEEEEeecC
Q 048419          403 LLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTY-LNAKLGDFGL  481 (653)
Q Consensus       403 ~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~-~~~kl~DfGl  481 (653)
                      ++|||||++|+|.+++.        .+++.++..++.||+.||+|||+   ++|+||||||+|||++.+ +.+||+|||+
T Consensus        96 ~lvmE~~~g~~L~~~~~--------~l~~~~~~~~~~qll~al~ylH~---~gIiHRDiKPeNiLl~~~~~~~kl~DFGl  164 (361)
T 4f9c_A           96 VIAMPYLEHESFLDILN--------SLSFQEVREYMLNLFKALKRIHQ---FGIVHRDVKPSNFLYNRRLKKYALVDFGL  164 (361)
T ss_dssp             EEEEECCCCCCHHHHHT--------TCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEETTTTEEEECCCTT
T ss_pred             EEEEeCCCcccHHHHHc--------CCCHHHHHHHHHHHHHHHHHHHH---CCeEeCcCCHHHeEEeCCCCeEEECcCCC
Confidence            99999999999999883        27889999999999999999999   999999999999999877 7999999999


Q ss_pred             cccccCCCC---------------------------CcccccccCCcccCccccccC-CCCCccceeehHHHHHHHHhCC
Q 048419          482 AKIYEHGAN---------------------------PQTTHIVGTLGYLAPELTRTG-KATTSTDVYSYGILMLEVACGR  533 (653)
Q Consensus       482 a~~~~~~~~---------------------------~~~~~~~gt~~y~aPE~~~~~-~~~~ksDV~s~Gvvl~elltG~  533 (653)
                      |+.......                           ......+||+.|+|||++.+. .++.++||||+||++|||++|+
T Consensus       165 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~  244 (361)
T 4f9c_A          165 AQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGR  244 (361)
T ss_dssp             CEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTC
T ss_pred             CcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCC
Confidence            986533211                           112345799999999998765 5899999999999999999999


Q ss_pred             CCCChhhhhhHHHHHHHHHhhh---------------------cccchhHhhhh---------cc-----C-----cCCH
Q 048419          534 RSIEPQKAAAELLLVDWVKELH---------------------LEGEITQAIDQ---------TL-----D-----YYDL  573 (653)
Q Consensus       534 ~p~~~~~~~~~~~l~~~~~~~~---------------------~~~~~~~~~d~---------~l-----~-----~~~~  573 (653)
                      .||.......+. +........                     ...........         .+     .     ....
T Consensus       245 ~Pf~~~~~~~~~-l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~  323 (361)
T 4f9c_A          245 YPFYKASDDLTA-LAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWN  323 (361)
T ss_dssp             SSSSCCSSHHHH-HHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CT
T ss_pred             CCCCCCCCHHHH-HHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccc
Confidence            999654322111 111100000                     00000000000         00     0     0000


Q ss_pred             HHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          574 AEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       574 ~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                      ...+.+.+|+.+||+.||.+|||++|++++-.
T Consensus       324 ~is~~a~DLl~~lL~~dP~~R~ta~eaL~Hp~  355 (361)
T 4f9c_A          324 EVPDEAYDLLDKLLDLNPASRITAEEALLHPF  355 (361)
T ss_dssp             TCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGG
T ss_pred             cCCHHHHHHHHHHCcCChhHCcCHHHHhcCcc
Confidence            12356889999999999999999999998654

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=100.00  E-value=9e-45  Score=407.32  Aligned_cols=256  Identities=23%  Similarity=0.314  Sum_probs=214.8

Q ss_pred             hcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEec
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDY  408 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~  408 (653)
                      .++|+..+.||+|+||.||+|.++.+|+.||||++........+.+.+|+.+|++|+|||||++++++.+.+.++|||||
T Consensus       156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~  235 (573)
T 3uto_A          156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF  235 (573)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEee
Confidence            36899999999999999999999999999999999877666677899999999999999999999999999999999999


Q ss_pred             cCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCC--CcEEEEeecCccccc
Q 048419          409 VPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTY--LNAKLGDFGLAKIYE  486 (653)
Q Consensus       409 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~--~~~kl~DfGla~~~~  486 (653)
                      |++|+|.++|....    ..+++.++..++.||+.||+|||+   ++|+||||||+|||++.+  +.+||+|||+++.+.
T Consensus       236 ~~gg~L~~~i~~~~----~~l~e~~~~~~~~qi~~al~ylH~---~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~  308 (573)
T 3uto_A          236 MSGGELFEKVADEH----NKMSEDEAVEYMRQVCKGLCHMHE---NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLD  308 (573)
T ss_dssp             CCCCBHHHHHTCTT----SCEEHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSCCCEEECCCSSCEECC
T ss_pred             cCCCcHHHHHHHhC----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCChhhccccCCCCCCEEEeeccceeEcc
Confidence            99999999986542    358999999999999999999999   999999999999999754  899999999999765


Q ss_pred             CCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhh
Q 048419          487 HGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQ  566 (653)
Q Consensus       487 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  566 (653)
                      ..  ......+||+.|+|||++.+..++.++||||+||++|||++|+.||......+.   ...+...  ......... 
T Consensus       309 ~~--~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~---~~~i~~~--~~~~~~~~~-  380 (573)
T 3uto_A          309 PK--QSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDET---LRNVKSC--DWNMDDSAF-  380 (573)
T ss_dssp             TT--SEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHH---HHHHHTT--CCCCCSGGG-
T ss_pred             CC--CceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHH---HHHHHhC--CCCCCcccc-
Confidence            43  234456899999999999999999999999999999999999999986554321   1111111  001110000 


Q ss_pred             ccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          567 TLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       567 ~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                            ......+.+|+.+||+.||.+|||+.|++++-.
T Consensus       381 ------~~~s~~~~dli~~~L~~dp~~R~t~~e~l~Hpw  413 (573)
T 3uto_A          381 ------SGISEDGKDFIRKLLLADPNTRMTIHQALEHPW  413 (573)
T ss_dssp             ------TTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTT
T ss_pred             ------cCCCHHHHHHHHHHccCChhHCcCHHHHhcCcC
Confidence                  112356789999999999999999999999754

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=100.00  E-value=3.4e-44  Score=400.71  Aligned_cols=251  Identities=22%  Similarity=0.261  Sum_probs=203.8

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc---hhhHHHH---HHHHHHHhhcCCCceeeeeeeecccceeE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS---QQGMKEF---VAEIMSMGRLRHRNLVQLHGWCRKQDELL  403 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~---~~E~~~l~~l~H~niv~l~g~~~~~~~~~  403 (653)
                      ++|+..++||+|+||.||+|++..+|+.||||++.+..   .+.....   ..++.+++.++|||||++++++.+.+.+|
T Consensus       189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~ly  268 (689)
T 3v5w_A          189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS  268 (689)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred             HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEE
Confidence            56999999999999999999999999999999996431   1222223   34567778889999999999999999999


Q ss_pred             EEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcc
Q 048419          404 LVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK  483 (653)
Q Consensus       404 lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~  483 (653)
                      ||||||+||+|.++|...     ..+++..+..++.||+.||+|||+   ++||||||||+||||+.+|.+||+|||+|+
T Consensus       269 lVmEy~~GGdL~~~l~~~-----~~l~E~~a~~y~~qIl~aL~yLH~---~gIiHRDLKPeNILld~~G~vKL~DFGlA~  340 (689)
T 3v5w_A          269 FILDLMNGGDLHYHLSQH-----GVFSEADMRFYAAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLAC  340 (689)
T ss_dssp             EEECCCCSCBHHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred             EEEecCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCchHHeEEeCCCCEEecccceee
Confidence            999999999999999764     348999999999999999999999   999999999999999999999999999998


Q ss_pred             cccCCCCCcccccccCCcccCcccccc-CCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhH
Q 048419          484 IYEHGANPQTTHIVGTLGYLAPELTRT-GKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQ  562 (653)
Q Consensus       484 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~  562 (653)
                      .....   .....+||+.|||||++.. ..|+.++|+||+||+||||++|+.||..........+...+...        
T Consensus       341 ~~~~~---~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~~--------  409 (689)
T 3v5w_A          341 DFSKK---KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTM--------  409 (689)
T ss_dssp             ECSSC---CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHHC--------
T ss_pred             ecCCC---CCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCC--------
Confidence            76543   2344689999999999964 57999999999999999999999999765432211111111110        


Q ss_pred             hhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCC-----HHHHHHHH
Q 048419          563 AIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPD-----MRRVVEFL  604 (653)
Q Consensus       563 ~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs-----~~evl~~L  604 (653)
                          .. .++......+.+|+.+||+.||.+|++     +.||+++-
T Consensus       410 ----~~-~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~Hp  451 (689)
T 3v5w_A          410 ----AV-ELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESP  451 (689)
T ss_dssp             ----CC-CCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTSG
T ss_pred             ----CC-CCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcCc
Confidence                00 111123466889999999999999998     78888754

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=100.00  E-value=2.4e-42  Score=358.78  Aligned_cols=281  Identities=37%  Similarity=0.608  Sum_probs=233.6

Q ss_pred             CCcccCHHHHHHhhcCcCcc------eeeeeeCcEEEEEEEeCCCCcEEEEEEeccC----chhhHHHHHHHHHHHhhcC
Q 048419          316 GARRFKYAELASVTKGFGEQ------NLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN----SQQGMKEFVAEIMSMGRLR  385 (653)
Q Consensus       316 ~~~~f~~~el~~at~~f~~~------~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~----~~~~~~~~~~E~~~l~~l~  385 (653)
                      ....|++.++..++++|...      +.||+|+||.||+|..  ++..||||++...    ..+..+.+.+|+.++++++
T Consensus        11 ~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~   88 (307)
T 2nru_A           11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQ   88 (307)
T ss_dssp             CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES--SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCC
T ss_pred             CCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE--CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcC
Confidence            45789999999999999888      8999999999999987  4789999998643    2345678999999999999


Q ss_pred             CCceeeeeeeecccceeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCc
Q 048419          386 HRNLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSN  465 (653)
Q Consensus       386 H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~N  465 (653)
                      ||||+++++++.+.+..++||||+++++|.+++.....  ...+++..++.++.||+.||.|||+   ++|+||||||+|
T Consensus        89 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dlkp~N  163 (307)
T 2nru_A           89 HENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDG--TPPLSWHMRCKIAQGAANGINFLHE---NHHIHRDIKSAN  163 (307)
T ss_dssp             CTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGG--CCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGG
T ss_pred             CCCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccC--CCCCCHHHHHHHHHHHHHHHHHHhc---CCeecCCCCHHH
Confidence            99999999999999999999999999999999976432  3568999999999999999999999   899999999999


Q ss_pred             EEEcCCCcEEEEeecCcccccCCCCC-cccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhH
Q 048419          466 ILLDTYLNAKLGDFGLAKIYEHGANP-QTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAE  544 (653)
Q Consensus       466 Ill~~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~  544 (653)
                      |+++.++.+||+|||+++........ ......||+.|+|||.+.+ .++.++||||||+++|||++|+.||........
T Consensus       164 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~  242 (307)
T 2nru_A          164 ILLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQL  242 (307)
T ss_dssp             EEECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSB
T ss_pred             EEEcCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHH
Confidence            99999999999999999876543222 2233578999999998864 588999999999999999999999986543221


Q ss_pred             HHHHHHHHhh-hcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          545 LLLVDWVKEL-HLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       545 ~~l~~~~~~~-~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                        +..+.... .....+.+.+++.+..........+.+++.+||+.||.+|||+.+|+++|+.
T Consensus       243 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~  303 (307)
T 2nru_A          243 --LLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQE  303 (307)
T ss_dssp             --TTHHHHHHHTTSCCHHHHSCSSCSCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred             --HHHHHHHhhhhhhhhhhhccccccccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHH
Confidence              11111111 1223455566666666677788899999999999999999999999999974

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=100.00  E-value=5.3e-43  Score=362.44  Aligned_cols=255  Identities=24%  Similarity=0.340  Sum_probs=213.7

Q ss_pred             hcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEec
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDY  408 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~  408 (653)
                      .++|...+.||+|+||.||+|.+..+++.||||++........+.+.+|+.++++++||||+++++++...+..++||||
T Consensus        19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~   98 (297)
T 3fxz_A           19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY   98 (297)
T ss_dssp             GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence            46799999999999999999999889999999999766656677889999999999999999999999999999999999


Q ss_pred             cCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCC
Q 048419          409 VPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHG  488 (653)
Q Consensus       409 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~  488 (653)
                      +++|+|.+++...      .+++.+++.++.|++.||.|||+   ++|+||||||+|||++.++.+||+|||++......
T Consensus        99 ~~~~~L~~~~~~~------~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~  169 (297)
T 3fxz_A           99 LAGGSLTDVVTET------CMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE  169 (297)
T ss_dssp             CTTCBHHHHHHHS------CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECCST
T ss_pred             CCCCCHHHHHhhc------CCCHHHHHHHHHHHHHHHHHHHh---CCceeCCCCHHHEEECCCCCEEEeeCCCceecCCc
Confidence            9999999999653      38899999999999999999999   89999999999999999999999999999876543


Q ss_pred             CCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhcc
Q 048419          489 ANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTL  568 (653)
Q Consensus       489 ~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l  568 (653)
                      .. ......||+.|+|||.+.+..++.++|||||||++|||++|+.||...........  ......          +.+
T Consensus       170 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~--~~~~~~----------~~~  236 (297)
T 3fxz_A          170 QS-KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYL--IATNGT----------PEL  236 (297)
T ss_dssp             TC-CBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHH--HHHHCS----------CCC
T ss_pred             cc-ccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH--HHhCCC----------CCC
Confidence            32 23345799999999999999999999999999999999999999976544322111  111000          000


Q ss_pred             CcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          569 DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       569 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                       ..+......+.+++.+||+.||.+|||+.|++++-.-
T Consensus       237 -~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~  273 (297)
T 3fxz_A          237 -QNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQFL  273 (297)
T ss_dssp             -SCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGG
T ss_pred             -CCccccCHHHHHHHHHHccCChhHCcCHHHHhhChhh
Confidence             0111234568899999999999999999999986543

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=100.00  E-value=2.9e-43  Score=366.42  Aligned_cols=257  Identities=21%  Similarity=0.369  Sum_probs=212.5

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEecc
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYV  409 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~  409 (653)
                      ++|...+.||+|+||.||+|.+..+++.||+|++........+.+.+|++++++++||||+++++++.+.+..++||||+
T Consensus        10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~   89 (310)
T 3s95_A           10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYI   89 (310)
T ss_dssp             GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEec
Confidence            56788999999999999999999999999999997777777889999999999999999999999999999999999999


Q ss_pred             CCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCC
Q 048419          410 PNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGA  489 (653)
Q Consensus       410 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~  489 (653)
                      ++++|.+++....    ..+++.+++.++.|+++||+|||+   ++|+||||||+|||++.++.+||+|||+++......
T Consensus        90 ~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~  162 (310)
T 3s95_A           90 KGGTLRGIIKSMD----SQYPWSQRVSFAKDIASGMAYLHS---MNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEK  162 (310)
T ss_dssp             TTCBHHHHHHHCC----TTSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEEECTTSCEEECCCTTCEECC---
T ss_pred             CCCcHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCCcCeEEECCCCCEEEeecccceeccccc
Confidence            9999999997643    458999999999999999999999   899999999999999999999999999998764332


Q ss_pred             CCc-------------ccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhc
Q 048419          490 NPQ-------------TTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHL  556 (653)
Q Consensus       490 ~~~-------------~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~  556 (653)
                      ...             .....||+.|+|||.+.+..++.++|||||||++|||++|..|+.........          .
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~----------~  232 (310)
T 3s95_A          163 TQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMD----------F  232 (310)
T ss_dssp             -----------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTT----------S
T ss_pred             ccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHH----------H
Confidence            211             11457999999999999999999999999999999999999988653321100          0


Q ss_pred             ccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          557 EGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       557 ~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                      ........+...   +......+.+++.+||+.||.+|||+.++++.|+.
T Consensus       233 ~~~~~~~~~~~~---~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~  279 (310)
T 3s95_A          233 GLNVRGFLDRYC---PPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLET  279 (310)
T ss_dssp             SBCHHHHHHHTC---CTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             hhhhhccccccC---CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence            001111111111   11223468899999999999999999999999864

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=100.00  E-value=1.2e-42  Score=363.85  Aligned_cols=268  Identities=21%  Similarity=0.301  Sum_probs=221.2

Q ss_pred             CCcccCHHHHHHhhcC----------cCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcC
Q 048419          316 GARRFKYAELASVTKG----------FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLR  385 (653)
Q Consensus       316 ~~~~f~~~el~~at~~----------f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~  385 (653)
                      ....+++++++.+++.          |...+.||+|+||.||+|.+..+|+.||||++........+.+.+|+.++++++
T Consensus        21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~  100 (321)
T 2c30_A           21 QSGVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQ  100 (321)
T ss_dssp             ----CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCC
T ss_pred             cCCcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCC
Confidence            3467899999998875          677789999999999999998889999999997766666788999999999999


Q ss_pred             CCceeeeeeeecccceeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCc
Q 048419          386 HRNLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSN  465 (653)
Q Consensus       386 H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~N  465 (653)
                      ||||+++++++...+..++||||+++++|.+++...      .+++.+++.++.|+++||.|||+   ++|+||||||+|
T Consensus       101 h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~------~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~N  171 (321)
T 2c30_A          101 HFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQV------RLNEEQIATVCEAVLQALAYLHA---QGVIHRDIKSDS  171 (321)
T ss_dssp             CTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTTC------CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGG
T ss_pred             CCCcceEEEEEEECCEEEEEEecCCCCCHHHHHHhc------CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHH
Confidence            999999999999999999999999999999998643      38999999999999999999999   899999999999


Q ss_pred             EEEcCCCcEEEEeecCcccccCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHH
Q 048419          466 ILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAEL  545 (653)
Q Consensus       466 Ill~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~  545 (653)
                      ||++.++.+||+|||++........ ......||+.|+|||++.+..++.++|||||||++|||++|+.||........ 
T Consensus       172 Ill~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~-  249 (321)
T 2c30_A          172 ILLTLDGRVKLSDFGFCAQISKDVP-KRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQA-  249 (321)
T ss_dssp             EEECTTCCEEECCCTTCEECCSSSC-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH-
T ss_pred             EEECCCCcEEEeeeeeeeecccCcc-ccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-
Confidence            9999999999999999987654322 23445799999999999999999999999999999999999999976543221 


Q ss_pred             HHHHHHHhhhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          546 LLVDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       546 ~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                        ...+....         .+.+. ........+.+++.+||+.||.+|||+.|++++...
T Consensus       250 --~~~~~~~~---------~~~~~-~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~  298 (321)
T 2c30_A          250 --MKRLRDSP---------PPKLK-NSHKVSPVLRDFLERMLVRDPQERATAQELLDHPFL  298 (321)
T ss_dssp             --HHHHHHSS---------CCCCT-TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGG
T ss_pred             --HHHHhcCC---------CCCcC-ccccCCHHHHHHHHHHccCChhhCcCHHHHhcChhh
Confidence              11111110         01110 011123568899999999999999999999987543

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=100.00  E-value=8.3e-43  Score=379.22  Aligned_cols=270  Identities=20%  Similarity=0.226  Sum_probs=218.2

Q ss_pred             cccCHHHHHHhhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc---hhhHHHHHHHHHHHhhcCCCceeeeee
Q 048419          318 RRFKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS---QQGMKEFVAEIMSMGRLRHRNLVQLHG  394 (653)
Q Consensus       318 ~~f~~~el~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g  394 (653)
                      ..+.+.+++..+++|+..++||+|+||+||+|++..+++.||||++....   ....+.+.+|..++.+++||||+++++
T Consensus        62 ~~~~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~  141 (437)
T 4aw2_A           62 FTSKVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHY  141 (437)
T ss_dssp             HHHHHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEE
T ss_pred             ccchhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEE
Confidence            34567777788899999999999999999999999999999999996432   122334889999999999999999999


Q ss_pred             eecccceeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcE
Q 048419          395 WCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNA  474 (653)
Q Consensus       395 ~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~  474 (653)
                      +|.+.+.+++|||||++|+|.+++....    ..+++..++.++.||+.||.|||+   ++|+||||||+||||+.++.+
T Consensus       142 ~~~~~~~~~lV~Ey~~gg~L~~~l~~~~----~~l~e~~~~~~~~qi~~aL~~LH~---~giiHrDLKp~NILl~~~g~v  214 (437)
T 4aw2_A          142 AFQDDNNLYLVMDYYVGGDLLTLLSKFE----DRLPEEMARFYLAEMVIAIDSVHQ---LHYVHRDIKPDNILMDMNGHI  214 (437)
T ss_dssp             EEECSSEEEEEECCCTTCBHHHHHHTTT----TCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCE
T ss_pred             EEeeCCEEEEEEecCCCCcHHHHHHHcc----CCCCHHHHHHHHHHHHHHHHHHHh---CCeEecccCHHHeeEcCCCCE
Confidence            9999999999999999999999997642    348999999999999999999999   999999999999999999999


Q ss_pred             EEEeecCcccccCCCCCcccccccCCcccCccccc-----cCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHH
Q 048419          475 KLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTR-----TGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVD  549 (653)
Q Consensus       475 kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~  549 (653)
                      ||+|||+++.............+||+.|+|||++.     ...++.++|||||||++|||++|+.||......+..   .
T Consensus       215 kL~DFGla~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~---~  291 (437)
T 4aw2_A          215 RLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETY---G  291 (437)
T ss_dssp             EECCCTTCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHH---H
T ss_pred             EEcchhhhhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHH---H
Confidence            99999999876544333334468999999999987     567899999999999999999999999865443211   1


Q ss_pred             HHHhhhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCC--CCCHHHHHHHHc
Q 048419          550 WVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVY--RPDMRRVVEFLL  605 (653)
Q Consensus       550 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~--RPs~~evl~~L~  605 (653)
                      .+.......        ............+.+|+.+||+.+|.+  ||++.|++++-.
T Consensus       292 ~i~~~~~~~--------~~p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~Hpf  341 (437)
T 4aw2_A          292 KIMNHKERF--------QFPTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKHPF  341 (437)
T ss_dssp             HHHTHHHHC--------CCCSSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTSGG
T ss_pred             hhhhccccc--------cCCcccccCCHHHHHHHHHHhcccccccCCCCHHHHhCCCc
Confidence            111000000        000000112456889999999888888  999999998764

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=100.00  E-value=2e-42  Score=363.20  Aligned_cols=251  Identities=25%  Similarity=0.378  Sum_probs=211.1

Q ss_pred             hcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC--chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEE
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVY  406 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  406 (653)
                      .++|...+.||+|+||.||+|.+..+|+.||||++...  .....+.+.+|++++++++||||+++++++...+..++||
T Consensus        14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~   93 (328)
T 3fe3_A           14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM   93 (328)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence            46789999999999999999999889999999999654  4455678899999999999999999999999999999999


Q ss_pred             eccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccccc
Q 048419          407 DYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE  486 (653)
Q Consensus       407 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~  486 (653)
                      ||+++|+|.+++...     ..+++.+++.++.||+.||+|||+   ++|+||||||+|||++.++++||+|||+++...
T Consensus        94 e~~~~~~L~~~l~~~-----~~l~~~~~~~~~~qi~~al~~lH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~  165 (328)
T 3fe3_A           94 EYASGGEVFDYLVAH-----GRMKEKEARSKFRQIVSAVQYCHQ---KRIVHRDLKAENLLLDADMNIKIADFGFSNEFT  165 (328)
T ss_dssp             CCCTTCBHHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECSTTCCGGGS
T ss_pred             ECCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCEeccCCCHHHEEEcCCCCEEEeeccCceecC
Confidence            999999999999764     348899999999999999999999   899999999999999999999999999998665


Q ss_pred             CCCCCcccccccCCcccCccccccCCCC-CccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhh
Q 048419          487 HGANPQTTHIVGTLGYLAPELTRTGKAT-TSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAID  565 (653)
Q Consensus       487 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d  565 (653)
                      ..  .......||+.|+|||.+.+..+. .++||||+||++|||++|+.||.......   +.+.+..    +.      
T Consensus       166 ~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~---~~~~i~~----~~------  230 (328)
T 3fe3_A          166 VG--GKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKE---LRERVLR----GK------  230 (328)
T ss_dssp             SS--CGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHHHHHH----CC------
T ss_pred             CC--CccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHH---HHHHHHh----CC------
Confidence            43  234456799999999999888765 79999999999999999999998654322   1111111    10      


Q ss_pred             hccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          566 QTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       566 ~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                         ...+......+.+|+.+||+.||.+|||+.|++++-.
T Consensus       231 ---~~~p~~~s~~~~~li~~~L~~dP~~R~t~~eil~h~~  267 (328)
T 3fe3_A          231 ---YRIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMKDRW  267 (328)
T ss_dssp             ---CCCCTTSCHHHHHHHHHHCCSSTTTSCCHHHHTTCTT
T ss_pred             ---CCCCCCCCHHHHHHHHHHCCCChhHCcCHHHHhcCHh
Confidence               0111122456889999999999999999999998754

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=100.00  E-value=1.3e-42  Score=361.77  Aligned_cols=259  Identities=27%  Similarity=0.400  Sum_probs=204.4

Q ss_pred             HhhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC--chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEE
Q 048419          327 SVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLL  404 (653)
Q Consensus       327 ~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  404 (653)
                      ...++|+..+.||+|+||.||+|...  +..||||++...  ..+..+.+.+|++++++++||||+++++++.+.+..++
T Consensus        34 i~~~~y~i~~~lG~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l  111 (309)
T 3p86_A           34 IPWCDLNIKEKIGAGSFGTVHRAEWH--GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSI  111 (309)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEET--TEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEE
T ss_pred             CChhHceeeeEeecCCCeEEEEEEEC--CCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEE
Confidence            34567888999999999999999874  789999998654  34456789999999999999999999999999999999


Q ss_pred             EEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCC--eEecCCCCCcEEEcCCCcEEEEeecCc
Q 048419          405 VYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQR--VVHRDVKPSNILLDTYLNAKLGDFGLA  482 (653)
Q Consensus       405 V~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~--ivH~Dlkp~NIll~~~~~~kl~DfGla  482 (653)
                      ||||+++|+|.+++.....  ...+++..++.++.||+.||+|||+   ++  |+||||||+|||++.++.+||+|||++
T Consensus       112 v~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~i~~qi~~aL~~LH~---~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a  186 (309)
T 3p86_A          112 VTEYLSRGSLYRLLHKSGA--REQLDERRRLSMAYDVAKGMNYLHN---RNPPIVHRNLKSPNLLVDKKYTVKVCDFGLS  186 (309)
T ss_dssp             EEECCTTCBHHHHHHSTTH--HHHSCHHHHHHHHHHHHHHHHHHHT---SSSCCCCTTCCGGGEEECTTCCEEECCCC--
T ss_pred             EEecCCCCcHHHHHhhcCC--CCCCCHHHHHHHHHHHHHHHHHHHc---CCCCEECCCCChhhEEEeCCCcEEECCCCCC
Confidence            9999999999999976542  3458999999999999999999999   78  999999999999999999999999999


Q ss_pred             ccccCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhH
Q 048419          483 KIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQ  562 (653)
Q Consensus       483 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~  562 (653)
                      +...... .......||+.|+|||.+.+..++.++|||||||++|||++|+.||.........   ..+......     
T Consensus       187 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~---~~~~~~~~~-----  257 (309)
T 3p86_A          187 RLKASTF-LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVV---AAVGFKCKR-----  257 (309)
T ss_dssp             ----------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHH---HHHHHSCCC-----
T ss_pred             ccccccc-cccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH---HHHHhcCCC-----
Confidence            8644322 2233457899999999999999999999999999999999999999865443211   111111000     


Q ss_pred             hhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcCC
Q 048419          563 AIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLGD  607 (653)
Q Consensus       563 ~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  607 (653)
                            ...+......+.+++.+||+.||.+|||+.|+++.|+..
T Consensus       258 ------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~  296 (309)
T 3p86_A          258 ------LEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPL  296 (309)
T ss_dssp             ------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             ------CCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence                  011122345688999999999999999999999998753

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=100.00  E-value=2.2e-42  Score=357.20  Aligned_cols=261  Identities=25%  Similarity=0.385  Sum_probs=209.1

Q ss_pred             hcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC---chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEE
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN---SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLV  405 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV  405 (653)
                      .++|+..+.||+|+||.||+|.+..++..||+|++...   .....+.+.+|+..+++++||||+++++++.+.+..++|
T Consensus        10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv   89 (294)
T 4eqm_A           10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV   89 (294)
T ss_dssp             ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred             hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence            46789999999999999999999989999999998543   334567899999999999999999999999999999999


Q ss_pred             EeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccc
Q 048419          406 YDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIY  485 (653)
Q Consensus       406 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~  485 (653)
                      |||+++++|.+++...     ..+++.+++.++.|++.||.|||+   ++|+||||||+|||++.++.+||+|||+++..
T Consensus        90 ~e~~~g~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~  161 (294)
T 4eqm_A           90 MEYIEGPTLSEYIESH-----GPLSVDTAINFTNQILDGIKHAHD---MRIVHRDIKPQNILIDSNKTLKIFDFGIAKAL  161 (294)
T ss_dssp             EECCCSCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCSSSTTC
T ss_pred             EeCCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEEeCCCcccc
Confidence            9999999999999654     348999999999999999999999   89999999999999999999999999999876


Q ss_pred             cCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhh
Q 048419          486 EHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAID  565 (653)
Q Consensus       486 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d  565 (653)
                      ............||+.|+|||.+.+..++.++||||||+++|||++|+.||.........  .    ... .........
T Consensus       162 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~--~----~~~-~~~~~~~~~  234 (294)
T 4eqm_A          162 SETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIA--I----KHI-QDSVPNVTT  234 (294)
T ss_dssp             -------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHH--H----HHH-SSCCCCHHH
T ss_pred             ccccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHH--H----HHh-hccCCCcch
Confidence            544333344567999999999999999999999999999999999999999865432211  0    000 111111100


Q ss_pred             hccCcCCHHHHHHHHHHHHHcCCCCCCCCC-CHHHHHHHHcCCC
Q 048419          566 QTLDYYDLAEAELVLNLGLFCSAPNPVYRP-DMRRVVEFLLGDS  608 (653)
Q Consensus       566 ~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RP-s~~evl~~L~~~~  608 (653)
                      .    ........+.+++.+||+.||.+|| ++.++.+.|+...
T Consensus       235 ~----~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~  274 (294)
T 4eqm_A          235 D----VRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVL  274 (294)
T ss_dssp             H----SCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSS
T ss_pred             h----cccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHH
Confidence            0    1112246788999999999999999 9999999997643

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=100.00  E-value=6.4e-43  Score=361.03  Aligned_cols=267  Identities=22%  Similarity=0.325  Sum_probs=208.5

Q ss_pred             hcCcCcceeeeeeCcEEEEEEE----eCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeeccc--cee
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGL----MPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQ--DEL  402 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~----~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~--~~~  402 (653)
                      .++|+..+.||+|+||.||+|.    ...+++.||||++........+.+.+|++++++++||||++++++|...  ...
T Consensus         9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~   88 (295)
T 3ugc_A            9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL   88 (295)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSC
T ss_pred             HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCce
Confidence            3578889999999999999998    4567899999999877777778899999999999999999999998654  458


Q ss_pred             EEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCc
Q 048419          403 LLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLA  482 (653)
Q Consensus       403 ~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla  482 (653)
                      ++||||+++|+|.+++....    ..+++.+++.++.|++.||.|||+   ++|+||||||+|||++.++.+||+|||++
T Consensus        89 ~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~  161 (295)
T 3ugc_A           89 KLIMEYLPYGSLRDYLQKHK----ERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDFGLT  161 (295)
T ss_dssp             EEEEECCTTCBHHHHHHHCG----GGCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCCCSC
T ss_pred             EEEEEeCCCCCHHHHHHhcc----cccCHHHHHHHHHHHHHHHHHHhc---CCcccCCCCHhhEEEcCCCeEEEccCccc
Confidence            99999999999999997653    348999999999999999999999   99999999999999999999999999999


Q ss_pred             ccccCCCC--CcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcc---
Q 048419          483 KIYEHGAN--PQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLE---  557 (653)
Q Consensus       483 ~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~---  557 (653)
                      +.......  .......++..|+|||.+.+..++.++||||||+++|||++|..|+........    .........   
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~----~~~~~~~~~~~~  237 (295)
T 3ugc_A          162 KVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFM----RMIGNDKQGQMI  237 (295)
T ss_dssp             C-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHH----HHHCTTCCTHHH
T ss_pred             ccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHH----hhhcCccccchh
Confidence            87644321  122234567789999999999999999999999999999999999875432210    000000000   


Q ss_pred             -cchhHhhhhcc-CcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          558 -GEITQAIDQTL-DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       558 -~~~~~~~d~~l-~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                       ..+.+.+.... ...+......+.+++.+||+.||.+|||+.|+++.|+.
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~  288 (295)
T 3ugc_A          238 VFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQ  288 (295)
T ss_dssp             HHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHHHHHHhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHH
Confidence             00111111111 11223345779999999999999999999999999864

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=100.00  E-value=1e-41  Score=359.00  Aligned_cols=250  Identities=26%  Similarity=0.336  Sum_probs=209.0

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC---chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN---SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVY  406 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  406 (653)
                      ++|+..+.||+|+||.||+|....+|+.||||++...   .....+.+.+|+.++++++||||+++++++...+.+++||
T Consensus         5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   84 (337)
T 1o6l_A            5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM   84 (337)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEE
Confidence            5788899999999999999999989999999999653   2344667889999999999999999999999999999999


Q ss_pred             eccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccccc
Q 048419          407 DYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE  486 (653)
Q Consensus       407 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~  486 (653)
                      ||+++|+|.+++...     ..+++.+++.++.||+.||+|||+   ++|+||||||+|||++.++.+||+|||+++...
T Consensus        85 E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~  156 (337)
T 1o6l_A           85 EYANGGELFFHLSRE-----RVFTEERARFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGI  156 (337)
T ss_dssp             ECCTTCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCSC
T ss_pred             eCCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCcCCHHHEEECCCCCEEEeeccchhhcc
Confidence            999999999998653     348899999999999999999999   899999999999999999999999999998643


Q ss_pred             CCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhh
Q 048419          487 HGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQ  566 (653)
Q Consensus       487 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  566 (653)
                      ... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.......   +.+.+..    +.       
T Consensus       157 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~---~~~~i~~----~~-------  221 (337)
T 1o6l_A          157 SDG-ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER---LFELILM----EE-------  221 (337)
T ss_dssp             CTT-CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHHHHHH----CC-------
T ss_pred             cCC-CcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHH---HHHHHHc----CC-------
Confidence            221 23344679999999999999999999999999999999999999997654321   1111111    00       


Q ss_pred             ccCcCCHHHHHHHHHHHHHcCCCCCCCCC-----CHHHHHHHH
Q 048419          567 TLDYYDLAEAELVLNLGLFCSAPNPVYRP-----DMRRVVEFL  604 (653)
Q Consensus       567 ~l~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~L  604 (653)
                       + .++......+.+++.+||+.||.+||     ++.|++++-
T Consensus       222 -~-~~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h~  262 (337)
T 1o6l_A          222 -I-RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHR  262 (337)
T ss_dssp             -C-CCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSG
T ss_pred             -C-CCCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcCC
Confidence             0 01112345688999999999999999     999998764

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=100.00  E-value=3.1e-42  Score=361.42  Aligned_cols=256  Identities=28%  Similarity=0.418  Sum_probs=208.3

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCC---cEEEEEEeccC-chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLG---LEVAIKRIGHN-SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLV  405 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~---~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV  405 (653)
                      ++|...+.||+|+||.||+|.+..++   ..||||++... .....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus        49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  128 (325)
T 3kul_A           49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIV  128 (325)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEE
T ss_pred             hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEE
Confidence            46778899999999999999987544   45999999765 445567899999999999999999999999999999999


Q ss_pred             EeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccc
Q 048419          406 YDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIY  485 (653)
Q Consensus       406 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~  485 (653)
                      |||+++|+|.+++....    ..+++.+++.++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+++..
T Consensus       129 ~e~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~  201 (325)
T 3kul_A          129 TEYMENGSLDTFLRTHD----GQFTIMQLVGMLRGVGAGMRYLSD---LGYVHRDLAARNVLVDSNLVCKVSDFGLSRVL  201 (325)
T ss_dssp             EECCTTCBHHHHHHTTT----TCSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCSSCEEC
T ss_pred             eeCCCCCcHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCcceEEECCCCCEEECCCCccccc
Confidence            99999999999996543    358999999999999999999999   89999999999999999999999999999876


Q ss_pred             cCCCCC--cccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhhcccchhH
Q 048419          486 EHGANP--QTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELHLEGEITQ  562 (653)
Q Consensus       486 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~  562 (653)
                      ......  ......+|+.|+|||.+.+..++.++|||||||++|||++ |+.||........   ...+....       
T Consensus       202 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~---~~~~~~~~-------  271 (325)
T 3kul_A          202 EDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDV---ISSVEEGY-------  271 (325)
T ss_dssp             C----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHH---HHHHHTTC-------
T ss_pred             ccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHH---HHHHHcCC-------
Confidence            543222  1222346778999999998899999999999999999999 9999976543321   11111110       


Q ss_pred             hhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcCC
Q 048419          563 AIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLGD  607 (653)
Q Consensus       563 ~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  607 (653)
                           ....+......+.+|+.+||+.||.+||++.||++.|+..
T Consensus       272 -----~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l  311 (325)
T 3kul_A          272 -----RLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDAL  311 (325)
T ss_dssp             -----CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             -----CCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence                 0111122346788999999999999999999999999764

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=100.00  E-value=1.4e-42  Score=363.59  Aligned_cols=265  Identities=24%  Similarity=0.354  Sum_probs=204.6

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccc----eeEEE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQD----ELLLV  405 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~----~~~lV  405 (653)
                      ++|+..++||+|+||.||+|.+.  ++.||||++..... ....+..|+.++++++||||+++++++....    .+++|
T Consensus        24 ~~y~~~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv  100 (322)
T 3soc_A           24 MPLQLLEVKARGRFGCVWKAQLL--NEYVAVKIFPIQDK-QSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLI  100 (322)
T ss_dssp             EEEEEEEEEECSTTCEEEEEEET--TEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred             hhchhhheecccCceEEEEEEEC--CCEEEEEEeecCch-HHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEE
Confidence            57888999999999999999986  78999999965433 3445667999999999999999999998754    47999


Q ss_pred             EeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCC----------CeEecCCCCCcEEEcCCCcEE
Q 048419          406 YDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQ----------RVVHRDVKPSNILLDTYLNAK  475 (653)
Q Consensus       406 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~----------~ivH~Dlkp~NIll~~~~~~k  475 (653)
                      |||+++|+|.+++...      .+++..++.++.|+++||.|||+   .          +|+||||||+|||++.++.+|
T Consensus       101 ~e~~~~g~L~~~l~~~------~~~~~~~~~i~~qi~~al~~LH~---~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~k  171 (322)
T 3soc_A          101 TAFHEKGSLSDFLKAN------VVSWNELCHIAETMARGLAYLHE---DIPGLKDGHKPAISHRDIKSKNVLLKNNLTAC  171 (322)
T ss_dssp             EECCTTCBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHTC---CEEEETTEEECEEECSCCSGGGEEECTTCCEE
T ss_pred             EecCCCCCHHHHHHhc------CCCHHHHHHHHHHHHHHHHHHHh---hccccccccCCCEEeCCCChHhEEECCCCeEE
Confidence            9999999999999653      38999999999999999999999   7          999999999999999999999


Q ss_pred             EEeecCcccccCCCC-CcccccccCCcccCccccccC-----CCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHH
Q 048419          476 LGDFGLAKIYEHGAN-PQTTHIVGTLGYLAPELTRTG-----KATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVD  549 (653)
Q Consensus       476 l~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~-----~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~  549 (653)
                      |+|||+++....... .......||+.|+|||++.+.     .++.++|||||||++|||++|+.||.............
T Consensus       172 L~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~  251 (322)
T 3soc_A          172 IADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEE  251 (322)
T ss_dssp             ECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHH
T ss_pred             EccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhh
Confidence            999999987654332 223345799999999998763     45678999999999999999999997543221111110


Q ss_pred             HHHhhhcccchhHhh-----hhccC--cCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          550 WVKELHLEGEITQAI-----DQTLD--YYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       550 ~~~~~~~~~~~~~~~-----d~~l~--~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                      ..........+.+.+     .+.+.  .........+.+|+.+||+.||.+|||+.||++.|+.
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~  315 (322)
T 3soc_A          252 EIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQ  315 (322)
T ss_dssp             HHCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             hhccCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence            000000000011111     01110  1123456779999999999999999999999999864

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=100.00  E-value=5.5e-42  Score=366.05  Aligned_cols=259  Identities=24%  Similarity=0.361  Sum_probs=211.1

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeC-------CCCcEEEEEEeccC-chhhHHHHHHHHHHHhhc-CCCceeeeeeeecccc
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMP-------SLGLEVAIKRIGHN-SQQGMKEFVAEIMSMGRL-RHRNLVQLHGWCRKQD  400 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~-------~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~  400 (653)
                      ++|...+.||+|+||.||+|.+.       .++..||||++... .....+.+.+|+.+++++ +||||++++++|.+.+
T Consensus        81 ~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~  160 (370)
T 2psq_A           81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG  160 (370)
T ss_dssp             GGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSS
T ss_pred             HHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCC
Confidence            67888999999999999999863       24568999999755 344567899999999999 8999999999999999


Q ss_pred             eeEEEEeccCCCCchhhhhccccc-----------ccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEc
Q 048419          401 ELLLVYDYVPNGSLDKLLFDKDHK-----------LRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLD  469 (653)
Q Consensus       401 ~~~lV~E~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~  469 (653)
                      .+++||||+++|+|.+++......           ....+++.+++.++.||+.||.|||+   ++|+||||||+|||++
T Consensus       161 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~  237 (370)
T 2psq_A          161 PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVLVT  237 (370)
T ss_dssp             SCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEEC
T ss_pred             CEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCeeccccchhhEEEC
Confidence            999999999999999999765321           12358899999999999999999999   8999999999999999


Q ss_pred             CCCcEEEEeecCcccccCCCC-CcccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHH
Q 048419          470 TYLNAKLGDFGLAKIYEHGAN-PQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLL  547 (653)
Q Consensus       470 ~~~~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l  547 (653)
                      .++.+||+|||+++....... .......+|+.|+|||++.+..++.++|||||||++|||++ |+.||.......   +
T Consensus       238 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~---~  314 (370)
T 2psq_A          238 ENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE---L  314 (370)
T ss_dssp             TTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG---H
T ss_pred             CCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHH---H
Confidence            999999999999986644322 22333467889999999999999999999999999999999 999997644322   1


Q ss_pred             HHHHHhhhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          548 VDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       548 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                      ...+....            ....+......+.+++.+||+.||.+||++.|+++.|+.
T Consensus       315 ~~~~~~~~------------~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~  361 (370)
T 2psq_A          315 FKLLKEGH------------RMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR  361 (370)
T ss_dssp             HHHHHTTC------------CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHHhcCC------------CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence            11111110            011122234678899999999999999999999999864

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=100.00  E-value=8.3e-42  Score=347.49  Aligned_cols=255  Identities=25%  Similarity=0.379  Sum_probs=210.2

Q ss_pred             hcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEec
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDY  408 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~  408 (653)
                      .++|...+.||+|+||.||+|.+.. +..||||++..... ..+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   84 (268)
T 3sxs_A            7 REEITLLKELGSGQFGVVKLGKWKG-QYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEY   84 (268)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETT-TEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred             hhheeeeeeeccCCCceEEEEEecC-ceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEc
Confidence            3678889999999999999998874 77899999965432 346789999999999999999999999999999999999


Q ss_pred             cCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCC
Q 048419          409 VPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHG  488 (653)
Q Consensus       409 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~  488 (653)
                      +++++|.+++....    ..+++.+++.++.|++.||.|||+   ++|+||||||+||+++.++.+||+|||++......
T Consensus        85 ~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~  157 (268)
T 3sxs_A           85 ISNGCLLNYLRSHG----KGLEPSQLLEMCYDVCEGMAFLES---HQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDD  157 (268)
T ss_dssp             CTTCBHHHHHHHHG----GGCCHHHHHHHHHHHHHHHHHHHH---TTEEESSCSGGGEEECTTCCEEECCTTCEEECCTT
T ss_pred             cCCCcHHHHHHHcC----CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCcCcceEEECCCCCEEEccCccceecchh
Confidence            99999999997642    458999999999999999999999   89999999999999999999999999999876544


Q ss_pred             CCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhc
Q 048419          489 ANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQT  567 (653)
Q Consensus       489 ~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~  567 (653)
                      .........+|+.|+|||.+.+..++.++||||||+++|||++ |+.||..........   .+..    +.        
T Consensus       158 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~---~~~~----~~--------  222 (268)
T 3sxs_A          158 QYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVL---KVSQ----GH--------  222 (268)
T ss_dssp             CEEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHH---HHHT----TC--------
T ss_pred             hhhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHH---HHHc----CC--------
Confidence            3333333456778999999998889999999999999999999 999997654432111   1110    00        


Q ss_pred             cCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcCC
Q 048419          568 LDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLGD  607 (653)
Q Consensus       568 l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  607 (653)
                      ....+......+.+++.+||+.||.+|||+.|++++|+.-
T Consensus       223 ~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l  262 (268)
T 3sxs_A          223 RLYRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPL  262 (268)
T ss_dssp             CCCCCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGG
T ss_pred             CCCCCCcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHh
Confidence            0001111235688999999999999999999999999764

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=100.00  E-value=3.3e-42  Score=368.08  Aligned_cols=255  Identities=29%  Similarity=0.450  Sum_probs=198.6

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeC---CCCcEEEEEEeccC-chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMP---SLGLEVAIKRIGHN-SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLV  405 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~---~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV  405 (653)
                      ++|...+.||+|+||.||+|++.   ..+..||||++... .....+.|.+|+.++++++||||++++++|.+.+..++|
T Consensus        45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv  124 (373)
T 2qol_A           45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV  124 (373)
T ss_dssp             GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred             hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEE
Confidence            57888999999999999999876   45778999999754 344567899999999999999999999999999999999


Q ss_pred             EeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccc
Q 048419          406 YDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIY  485 (653)
Q Consensus       406 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~  485 (653)
                      |||+++|+|.+++....    ..+++.+++.++.||++||+|||+   ++|+||||||+|||++.++.+||+|||+++..
T Consensus       125 ~e~~~~~sL~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~  197 (373)
T 2qol_A          125 TEYMENGSLDSFLRKHD----AQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLGRVL  197 (373)
T ss_dssp             EECCTTCBHHHHHHTTT----TCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCC------
T ss_pred             EeCCCCCcHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCcceEEEcCCCCEEECcCcccccc
Confidence            99999999999997643    358999999999999999999999   89999999999999999999999999999876


Q ss_pred             cCCCCCc--ccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhhcccchhH
Q 048419          486 EHGANPQ--TTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELHLEGEITQ  562 (653)
Q Consensus       486 ~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~  562 (653)
                      .......  .....+++.|+|||++.+..++.++|||||||++|||++ |+.||.......   +...+.....      
T Consensus       198 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~---~~~~i~~~~~------  268 (373)
T 2qol_A          198 EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD---VIKAVDEGYR------  268 (373)
T ss_dssp             ----------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHH---HHHHHHTTEE------
T ss_pred             ccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHH---HHHHHHcCCC------
Confidence            5432211  122345778999999999999999999999999999998 999997654322   1111111100      


Q ss_pred             hhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          563 AIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       563 ~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                            ..........+.+++.+||+.||.+||++.||++.|+.
T Consensus       269 ------~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~  306 (373)
T 2qol_A          269 ------LPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDK  306 (373)
T ss_dssp             ------CCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             ------CCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHH
Confidence                  11112334678999999999999999999999999864

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=100.00  E-value=3.7e-41  Score=357.97  Aligned_cols=256  Identities=23%  Similarity=0.327  Sum_probs=210.7

Q ss_pred             hhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchh------hHHHHHHHHHHHhhcCCCceeeeeeeecccce
Q 048419          328 VTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQ------GMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDE  401 (653)
Q Consensus       328 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~  401 (653)
                      ..++|...+.||+|+||.||+|.+..+|+.||||.+......      ..+.+.+|+.++++++||||+++++++.+.+.
T Consensus        10 ~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~   89 (361)
T 2yab_A           10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTD   89 (361)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred             hhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCE
Confidence            457899999999999999999999999999999999754321      35788999999999999999999999999999


Q ss_pred             eEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCC----cEEEE
Q 048419          402 LLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYL----NAKLG  477 (653)
Q Consensus       402 ~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~----~~kl~  477 (653)
                      +++||||+++|+|.+++...     ..+++.+++.++.||+.||.|||+   ++|+||||||+|||++.++    .+||+
T Consensus        90 ~~lv~e~~~gg~L~~~l~~~-----~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDlkp~NIll~~~~~~~~~vkl~  161 (361)
T 2yab_A           90 VVLILELVSGGELFDFLAQK-----ESLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLI  161 (361)
T ss_dssp             EEEEEECCCSCBHHHHHTTC-----SCCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCTTSSSCCEEEC
T ss_pred             EEEEEEcCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEeCCCCCccCEEEE
Confidence            99999999999999999653     348999999999999999999999   8999999999999998777    79999


Q ss_pred             eecCcccccCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcc
Q 048419          478 DFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLE  557 (653)
Q Consensus       478 DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~  557 (653)
                      |||+++......  ......||+.|+|||++.+..++.++|||||||++|||++|+.||........   ...+...  .
T Consensus       162 DFG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~---~~~i~~~--~  234 (361)
T 2yab_A          162 DFGLAHEIEDGV--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET---LANITAV--S  234 (361)
T ss_dssp             CCSSCEECCTTC--CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHH---HHHHHTT--C
T ss_pred             ecCCceEcCCCC--ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHhc--C
Confidence            999998765432  23345799999999999988999999999999999999999999976543221   1111110  0


Q ss_pred             cchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          558 GEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       558 ~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                      ........   .    .....+.+++.+||+.||.+|||+.|++++-.
T Consensus       235 ~~~~~~~~---~----~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~  275 (361)
T 2yab_A          235 YDFDEEFF---S----QTSELAKDFIRKLLVKETRKRLTIQEALRHPW  275 (361)
T ss_dssp             CCCCHHHH---T----TSCHHHHHHHHHHSCSSTTTSCCHHHHHTSTT
T ss_pred             CCCCchhc---c----CCCHHHHHHHHHHCCCChhHCcCHHHHhcCcC
Confidence            00000000   0    12356889999999999999999999998654

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=100.00  E-value=8.7e-42  Score=355.69  Aligned_cols=248  Identities=25%  Similarity=0.309  Sum_probs=199.2

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC--chhhHHHHHHHHHHHhhc-CCCceeeeeeeecccceeEEEE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRL-RHRNLVQLHGWCRKQDELLLVY  406 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~  406 (653)
                      ++|+..++||+|+||+||+|.+..+++.||||++...  .......+..|+..+.++ +|+||++++++|.+.+..++||
T Consensus        57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~  136 (311)
T 3p1a_A           57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT  136 (311)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence            6799999999999999999999988999999998653  233444566666666665 8999999999999999999999


Q ss_pred             eccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccccc
Q 048419          407 DYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE  486 (653)
Q Consensus       407 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~  486 (653)
                      ||+ +++|.+++....    ..++|.+++.++.||+.||+|||+   ++|+||||||+|||++.++++||+|||+++...
T Consensus       137 e~~-~~~L~~~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~  208 (311)
T 3p1a_A          137 ELC-GPSLQQHCEAWG----ASLPEAQVWGYLRDTLLALAHLHS---QGLVHLDVKPANIFLGPRGRCKLGDFGLLVELG  208 (311)
T ss_dssp             ECC-CCBHHHHHHHHC----SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECGGGCEEECCCTTCEECC
T ss_pred             ecc-CCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEECCCCCEEEccceeeeecc
Confidence            999 679999886643    458999999999999999999999   899999999999999999999999999998764


Q ss_pred             CCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhh
Q 048419          487 HGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQ  566 (653)
Q Consensus       487 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  566 (653)
                      ...  ......||+.|+|||++.+ .++.++|||||||++|||++|+.|+........          ...+.....+..
T Consensus       209 ~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~----------~~~~~~~~~~~~  275 (311)
T 3p1a_A          209 TAG--AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEGWQQ----------LRQGYLPPEFTA  275 (311)
T ss_dssp             --------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHHHHH----------HTTTCCCHHHHT
T ss_pred             cCC--CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccHHHH----------HhccCCCccccc
Confidence            322  2334569999999999875 789999999999999999999877654332110          111111111111


Q ss_pred             ccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          567 TLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       567 ~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                             .....+.+++.+||+.||.+|||+.|++++-.
T Consensus       276 -------~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~  307 (311)
T 3p1a_A          276 -------GLSSELRSVLVMMLEPDPKLRATAEALLALPV  307 (311)
T ss_dssp             -------TSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGG
T ss_pred             -------CCCHHHHHHHHHHcCCChhhCcCHHHHHhCcc
Confidence                   12367889999999999999999999998654

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=100.00  E-value=2.5e-42  Score=369.69  Aligned_cols=255  Identities=22%  Similarity=0.339  Sum_probs=209.0

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC-chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEec
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN-SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDY  408 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~  408 (653)
                      ++|...+.||+|+||.||+|.+..+++.||||.+... ..+..+.|.+|++++++++||||++++++|...+..++||||
T Consensus       114 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~  193 (377)
T 3cbl_A          114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMEL  193 (377)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred             HHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEEc
Confidence            5678889999999999999999888999999998754 334456789999999999999999999999999999999999


Q ss_pred             cCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCC
Q 048419          409 VPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHG  488 (653)
Q Consensus       409 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~  488 (653)
                      +++|+|.+++....    ..+++.+++.++.||+.||+|||+   ++|+||||||+|||++.++.+||+|||+++.....
T Consensus       194 ~~~g~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~  266 (377)
T 3cbl_A          194 VQGGDFLTFLRTEG----ARLRVKTLLQMVGDAAAGMEYLES---KCCIHRDLAARNCLVTEKNVLKISDFGMSREEADG  266 (377)
T ss_dssp             CTTCBHHHHHHHHG----GGCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCGGGCEECTTS
T ss_pred             CCCCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHH---CCcCCcccCHHHEEEcCCCcEEECcCCCceecCCC
Confidence            99999999997542    358899999999999999999999   89999999999999999999999999999864332


Q ss_pred             CCCcc-cccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhh
Q 048419          489 ANPQT-THIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQ  566 (653)
Q Consensus       489 ~~~~~-~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  566 (653)
                      ..... ....++..|+|||.+.+..++.++|||||||++|||++ |+.||.......   ..+.+....           
T Consensus       267 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~---~~~~~~~~~-----------  332 (377)
T 3cbl_A          267 VYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQ---TREFVEKGG-----------  332 (377)
T ss_dssp             EEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHH---HHHHHHTTC-----------
T ss_pred             ceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH---HHHHHHcCC-----------
Confidence            11111 11235678999999998899999999999999999998 999997654322   111111110           


Q ss_pred             ccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          567 TLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       567 ~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                      .+ ..+......+.+|+.+||+.||.+|||+.+|++.|+.
T Consensus       333 ~~-~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~  371 (377)
T 3cbl_A          333 RL-PCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQS  371 (377)
T ss_dssp             CC-CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             CC-CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHH
Confidence            00 1111234578899999999999999999999999864

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=100.00  E-value=3.7e-41  Score=352.08  Aligned_cols=271  Identities=21%  Similarity=0.266  Sum_probs=214.9

Q ss_pred             hcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc-hhhHHHHHHHHHHHhhcCCCceeeeeeeecccc--eeEEE
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS-QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQD--ELLLV  405 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~--~~~lV  405 (653)
                      .++|...++||+|+||.||+|.+..+++.||||++.... ....+.+.+|++++++++||||+++++++...+  ..++|
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv   87 (319)
T 4euu_A            8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI   87 (319)
T ss_dssp             SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred             CCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEE
Confidence            357888999999999999999999999999999997543 344677889999999999999999999987665  78999


Q ss_pred             EeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEE----cCCCcEEEEeecC
Q 048419          406 YDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILL----DTYLNAKLGDFGL  481 (653)
Q Consensus       406 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll----~~~~~~kl~DfGl  481 (653)
                      |||+++++|.+++.....  ...+++.+++.++.||++||.|||+   ++|+||||||+|||+    +.++.+||+|||+
T Consensus        88 ~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~  162 (319)
T 4euu_A           88 MEFCPCGSLYTVLEEPSN--AYGLPESEFLIVLRDVVGGMNHLRE---NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGA  162 (319)
T ss_dssp             EECCTTCBHHHHHHSGGG--TTCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEECTTSCEEEEECCCTT
T ss_pred             EeCCCCCCHHHHHHHhcc--ccCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEEeccCCCCceEEEccCCC
Confidence            999999999999987542  2348999999999999999999999   899999999999999    8888899999999


Q ss_pred             cccccCCCCCcccccccCCcccCccccc--------cCCCCCccceeehHHHHHHHHhCCCCCChhhhhhH--HHHHHHH
Q 048419          482 AKIYEHGANPQTTHIVGTLGYLAPELTR--------TGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAE--LLLVDWV  551 (653)
Q Consensus       482 a~~~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~--~~l~~~~  551 (653)
                      ++......  ......||+.|+|||++.        +..++.++|||||||++|||++|+.||........  ..+....
T Consensus       163 a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~  240 (319)
T 4euu_A          163 ARELEDDE--QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKII  240 (319)
T ss_dssp             CEECCTTC--CBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHH
T ss_pred             ceecCCCC--ceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHh
Confidence            98765432  223457999999999886        56789999999999999999999999974332211  1111111


Q ss_pred             HhhhcccchhHh---hh------hcc---CcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcCC
Q 048419          552 KELHLEGEITQA---ID------QTL---DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLGD  607 (653)
Q Consensus       552 ~~~~~~~~~~~~---~d------~~l---~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  607 (653)
                      ... ....+...   ..      ..+   ..........+.+++.+||+.||++|||+.|++++...+
T Consensus       241 ~~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~  307 (319)
T 4euu_A          241 TGK-PSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDI  307 (319)
T ss_dssp             HHC-CTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHH
T ss_pred             cCC-CcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHH
Confidence            111 11000000   00      011   133456778899999999999999999999999998643

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=100.00  E-value=2.9e-41  Score=352.81  Aligned_cols=247  Identities=24%  Similarity=0.318  Sum_probs=207.5

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc---hhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS---QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVY  406 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  406 (653)
                      ++|+..+.||+|+||.||++....+|+.||+|++....   ....+.+.+|+.+++.++||||+++++++.+.+.+++||
T Consensus         6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~   85 (318)
T 1fot_A            6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM   85 (318)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred             HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEE
Confidence            56888999999999999999999899999999996532   234567889999999999999999999999999999999


Q ss_pred             eccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccccc
Q 048419          407 DYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE  486 (653)
Q Consensus       407 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~  486 (653)
                      ||+++|+|.+++...     ..+++..++.++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+++...
T Consensus        86 e~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~  157 (318)
T 1fot_A           86 DYIEGGELFSLLRKS-----QRFPNPVAKFYAAEVCLALEYLHS---KDIIYRDLKPENILLDKNGHIKITDFGFAKYVP  157 (318)
T ss_dssp             CCCCSCBHHHHHHHT-----SSCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECTTSCEEECCCSSCEECS
T ss_pred             eCCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChheEEEcCCCCEEEeecCcceecC
Confidence            999999999999764     348899999999999999999999   899999999999999999999999999998754


Q ss_pred             CCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhh
Q 048419          487 HGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQ  566 (653)
Q Consensus       487 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  566 (653)
                      .    ......||+.|+|||++.+..++.++|||||||++|||++|+.||........   ...+..            .
T Consensus       158 ~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~---~~~i~~------------~  218 (318)
T 1fot_A          158 D----VTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKT---YEKILN------------A  218 (318)
T ss_dssp             S----CBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH---HHHHHH------------C
T ss_pred             C----ccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHH---HHHHHh------------C
Confidence            3    22345799999999999999999999999999999999999999976543211   111110            0


Q ss_pred             ccCcCCHHHHHHHHHHHHHcCCCCCCCCC-----CHHHHHHHH
Q 048419          567 TLDYYDLAEAELVLNLGLFCSAPNPVYRP-----DMRRVVEFL  604 (653)
Q Consensus       567 ~l~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~L  604 (653)
                      .+ .++......+.+++.+||+.||.+||     ++.|++++-
T Consensus       219 ~~-~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~hp  260 (318)
T 1fot_A          219 EL-RFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHP  260 (318)
T ss_dssp             CC-CCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSG
T ss_pred             CC-CCCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcCc
Confidence            01 01112235688999999999999999     899999754

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=4.9e-42  Score=349.54  Aligned_cols=253  Identities=26%  Similarity=0.394  Sum_probs=208.3

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEecc
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYV  409 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~  409 (653)
                      ++|...+.||+|+||.||+|.+.. +..||+|++..... ..+.+.+|++++++++||||+++++++.+.+..++||||+
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   87 (269)
T 4hcu_A           10 SELTFVQEIGSGQFGLVHLGYWLN-KDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM   87 (269)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETT-TEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred             hhceeeheecCCCccEEEEEEecC-CCeEEEEEeccccc-CHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeC
Confidence            568889999999999999999874 77899999965432 3467899999999999999999999999999999999999


Q ss_pred             CCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCC
Q 048419          410 PNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGA  489 (653)
Q Consensus       410 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~  489 (653)
                      ++++|.+++....    ..+++..++.++.|+++||.|||+   ++|+||||||+||+++.++.+||+|||+++......
T Consensus        88 ~~~~L~~~l~~~~----~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~  160 (269)
T 4hcu_A           88 EHGCLSDYLRTQR----GLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ  160 (269)
T ss_dssp             TTCBHHHHHHTTT----TCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHH
T ss_pred             CCCcHHHHHHhcC----cccCHHHHHHHHHHHHHHHHHHHh---CCeecCCcchheEEEcCCCCEEeccccccccccccc
Confidence            9999999996643    458999999999999999999999   899999999999999999999999999998654332


Q ss_pred             CCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhcc
Q 048419          490 NPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTL  568 (653)
Q Consensus       490 ~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l  568 (653)
                      ........+++.|+|||.+.+..++.++||||||+++|||++ |+.||........   ...+....            .
T Consensus       161 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~---~~~~~~~~------------~  225 (269)
T 4hcu_A          161 YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV---VEDISTGF------------R  225 (269)
T ss_dssp             HHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH---HHHHHTTC------------C
T ss_pred             cccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHH---HHHHhcCc------------c
Confidence            222233456778999999998999999999999999999999 9999976543221   11111100            0


Q ss_pred             CcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          569 DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       569 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                      ...+......+.+++.+||+.||.+||++.|++++|+.
T Consensus       226 ~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~  263 (269)
T 4hcu_A          226 LYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAE  263 (269)
T ss_dssp             CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             CCCCCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHH
Confidence            01111124568899999999999999999999999864

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=100.00  E-value=1.2e-41  Score=367.35  Aligned_cols=265  Identities=22%  Similarity=0.232  Sum_probs=213.9

Q ss_pred             CHHHHHHhhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc---hhhHHHHHHHHHHHhhcCCCceeeeeeeec
Q 048419          321 KYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS---QQGMKEFVAEIMSMGRLRHRNLVQLHGWCR  397 (653)
Q Consensus       321 ~~~el~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~  397 (653)
                      .+.+++...++|...++||+|+||.||+|++..+++.||+|++....   ....+.+.+|+.+++.++||||++++++|.
T Consensus        60 ~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~  139 (410)
T 3v8s_A           60 KIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQ  139 (410)
T ss_dssp             HHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred             HHHhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEE
Confidence            34566667789999999999999999999999999999999986421   122345789999999999999999999999


Q ss_pred             ccceeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEE
Q 048419          398 KQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLG  477 (653)
Q Consensus       398 ~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~  477 (653)
                      +.+.+++||||+++|+|.+++...      .+++..++.++.||+.||+|||+   ++|+||||||+||||+.++.+||+
T Consensus       140 ~~~~~~lV~E~~~gg~L~~~l~~~------~~~e~~~~~~~~qi~~aL~~LH~---~givHrDLKp~NILl~~~g~ikL~  210 (410)
T 3v8s_A          140 DDRYLYMVMEYMPGGDLVNLMSNY------DVPEKWARFYTAEVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLA  210 (410)
T ss_dssp             CSSEEEEEECCCTTEEHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEEC
T ss_pred             ECCEEEEEEeCCCCCcHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeeECCCCCEEEe
Confidence            999999999999999999998643      37889999999999999999999   899999999999999999999999


Q ss_pred             eecCcccccCCCCCcccccccCCcccCccccccCC----CCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHh
Q 048419          478 DFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGK----ATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKE  553 (653)
Q Consensus       478 DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~  553 (653)
                      |||+++.............+||+.|+|||++.+..    ++.++|||||||++|||++|+.||.........   ..+..
T Consensus       211 DFG~a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~---~~i~~  287 (410)
T 3v8s_A          211 DFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTY---SKIMN  287 (410)
T ss_dssp             CCTTCEECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHH---HHHHT
T ss_pred             ccceeEeeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHH---HHHHh
Confidence            99999876543322334568999999999997655    788999999999999999999999865433211   11110


Q ss_pred             hhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCC--CCCHHHHHHHHcC
Q 048419          554 LHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVY--RPDMRRVVEFLLG  606 (653)
Q Consensus       554 ~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~--RPs~~evl~~L~~  606 (653)
                      ...     ....+.    .......+.+|+.+||+.+|.+  ||++.||+++-..
T Consensus       288 ~~~-----~~~~p~----~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~Hp~f  333 (410)
T 3v8s_A          288 HKN-----SLTFPD----DNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFF  333 (410)
T ss_dssp             HHH-----HCCCCT----TCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTSGGG
T ss_pred             ccc-----cccCCC----cccccHHHHHHHHHHccChhhhCCCCCHHHHhcCccc
Confidence            000     000000    0012456889999999999988  9999999987643

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=100.00  E-value=2e-41  Score=355.39  Aligned_cols=257  Identities=23%  Similarity=0.333  Sum_probs=210.5

Q ss_pred             hhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCch------hhHHHHHHHHHHHhhcCCCceeeeeeeecccce
Q 048419          328 VTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQ------QGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDE  401 (653)
Q Consensus       328 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~  401 (653)
                      ..++|...+.||+|+||.||+|.+..++..||||++.....      ...+.+.+|+.++++++||||+++++++.+.+.
T Consensus         9 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~   88 (326)
T 2y0a_A            9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTD   88 (326)
T ss_dssp             HHHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred             cccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCE
Confidence            34568889999999999999999998999999999865422      136789999999999999999999999999999


Q ss_pred             eEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCC----cEEEE
Q 048419          402 LLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYL----NAKLG  477 (653)
Q Consensus       402 ~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~----~~kl~  477 (653)
                      .++||||+++++|.+++...     ..+++.+++.++.||+.||.|||+   ++|+||||||+|||++.++    .+||+
T Consensus        89 ~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~NIll~~~~~~~~~~kl~  160 (326)
T 2y0a_A           89 VILILELVAGGELFDFLAEK-----ESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKII  160 (326)
T ss_dssp             EEEEEECCCSCBHHHHHTTS-----SCCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESCSSSSSCCEEEC
T ss_pred             EEEEEEcCCCCCHHHHHHhc-----CCcCHHHHHHHHHHHHHHHHHHHH---CCeEcCCCCHHHEEEecCCCCCCCEEEE
Confidence            99999999999999999653     348999999999999999999999   9999999999999998887    89999


Q ss_pred             eecCcccccCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcc
Q 048419          478 DFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLE  557 (653)
Q Consensus       478 DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~  557 (653)
                      |||+++......  ......||+.|+|||++.+..++.++|||||||++|||++|+.||.........   ..+...  .
T Consensus       161 Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~---~~~~~~--~  233 (326)
T 2y0a_A          161 DFGLAHKIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL---ANVSAV--N  233 (326)
T ss_dssp             CCTTCEECCTTS--CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHH---HHHHHT--C
T ss_pred             ECCCCeECCCCC--ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHH---HHHHhc--C
Confidence            999998765332  223457999999999999889999999999999999999999999765432211   111110  0


Q ss_pred             cchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          558 GEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       558 ~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                      ........   .    .....+.+++.+||+.||.+|||+.|++++-.-
T Consensus       234 ~~~~~~~~---~----~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~  275 (326)
T 2y0a_A          234 YEFEDEYF---S----NTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI  275 (326)
T ss_dssp             CCCCHHHH---T----TSCHHHHHHHHHHSCSSGGGSCCHHHHHHSTTT
T ss_pred             CCcCcccc---c----cCCHHHHHHHHHHccCChhhCCCHHHHhcCCCc
Confidence            00000000   0    123568899999999999999999999987543

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.2e-41  Score=356.19  Aligned_cols=256  Identities=18%  Similarity=0.246  Sum_probs=211.3

Q ss_pred             hhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEe
Q 048419          328 VTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYD  407 (653)
Q Consensus       328 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E  407 (653)
                      ..++|...+.||+|+||.||+|.+..+++.||+|.+.... .....+.+|+.++++++||||+++++++.+.+..++|||
T Consensus         3 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e   81 (321)
T 1tki_A            3 LYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFE   81 (321)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEEC
T ss_pred             hhhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEE
Confidence            3578999999999999999999999999999999986543 345678899999999999999999999999999999999


Q ss_pred             ccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcC--CCcEEEEeecCcccc
Q 048419          408 YVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDT--YLNAKLGDFGLAKIY  485 (653)
Q Consensus       408 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~--~~~~kl~DfGla~~~  485 (653)
                      |+++|+|.+++....    ..+++.+++.++.||+.||.|||+   ++|+||||||+|||++.  ++.+||+|||+++..
T Consensus        82 ~~~g~~L~~~l~~~~----~~~~~~~~~~i~~qi~~al~~lH~---~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~  154 (321)
T 1tki_A           82 FISGLDIFERINTSA----FELNEREIVSYVHQVCEALQFLHS---HNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQL  154 (321)
T ss_dssp             CCCCCBHHHHHTSSS----CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSCCCEEECCCTTCEEC
T ss_pred             eCCCCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHH---CCCCcCCCCHHHEEEccCCCCCEEEEECCCCeEC
Confidence            999999999996542    358999999999999999999999   89999999999999987  789999999999876


Q ss_pred             cCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhh
Q 048419          486 EHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAID  565 (653)
Q Consensus       486 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d  565 (653)
                      ...  .......||+.|+|||.+.+..++.++|||||||++|||++|+.||.......   ....+.....  .......
T Consensus       155 ~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~---~~~~i~~~~~--~~~~~~~  227 (321)
T 1tki_A          155 KPG--DNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQ---IIENIMNAEY--TFDEEAF  227 (321)
T ss_dssp             CTT--CEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHH---HHHHHHHTCC--CCCHHHH
T ss_pred             CCC--CccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHH---HHHHHHcCCC--CCChhhh
Confidence            543  23344679999999999998889999999999999999999999997654322   1111111000  0000000


Q ss_pred             hccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          566 QTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       566 ~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                         .    .....+.+++.+||+.||.+|||+.|++++-.
T Consensus       228 ---~----~~s~~~~~li~~~L~~dp~~Rpt~~e~l~hp~  260 (321)
T 1tki_A          228 ---K----EISIEAMDFVDRLLVKERKSRMTASEALQHPW  260 (321)
T ss_dssp             ---T----TSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHH
T ss_pred             ---c----cCCHHHHHHHHHHcCCChhHCcCHHHHhcChh
Confidence               0    12356889999999999999999999999664

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=100.00  E-value=1.4e-41  Score=356.18  Aligned_cols=259  Identities=23%  Similarity=0.316  Sum_probs=208.5

Q ss_pred             hcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc-hhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEe
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS-QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYD  407 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E  407 (653)
                      .++|+..+.||+|+||.||+|.+..+++.||||++.... ....+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus         6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e   85 (323)
T 3tki_A            6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE   85 (323)
T ss_dssp             TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence            367899999999999999999999899999999986543 2334678899999999999999999999999999999999


Q ss_pred             ccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccC
Q 048419          408 YVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEH  487 (653)
Q Consensus       408 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~  487 (653)
                      |+++|+|.+++...     ..+++.+++.++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+++....
T Consensus        86 ~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~  157 (323)
T 3tki_A           86 YCSGGELFDRIEPD-----IGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRY  157 (323)
T ss_dssp             CCTTEEGGGGSBTT-----TBCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCEECEE
T ss_pred             cCCCCcHHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCccccccchHHEEEeCCCCEEEEEeeccceecc
Confidence            99999999999654     348999999999999999999999   9999999999999999999999999999986543


Q ss_pred             CC-CCcccccccCCcccCccccccCCC-CCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhh
Q 048419          488 GA-NPQTTHIVGTLGYLAPELTRTGKA-TTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAID  565 (653)
Q Consensus       488 ~~-~~~~~~~~gt~~y~aPE~~~~~~~-~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d  565 (653)
                      .. ........||+.|+|||++.+..+ +.++|||||||++|||++|+.||........ ....+........       
T Consensus       158 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-~~~~~~~~~~~~~-------  229 (323)
T 3tki_A          158 NNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ-EYSDWKEKKTYLN-------  229 (323)
T ss_dssp             TTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSH-HHHHHHTTCTTST-------
T ss_pred             CCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHH-HHHHHhcccccCC-------
Confidence            22 122334579999999999987765 7799999999999999999999976543211 1111111110000       


Q ss_pred             hccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcCCC
Q 048419          566 QTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLGDS  608 (653)
Q Consensus       566 ~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  608 (653)
                           ........+.+|+.+||+.||.+|||+.|++++.....
T Consensus       230 -----~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~  267 (323)
T 3tki_A          230 -----PWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNK  267 (323)
T ss_dssp             -----TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTC
T ss_pred             -----ccccCCHHHHHHHHHHccCChhhCcCHHHHhhChhhcc
Confidence                 00112356789999999999999999999998776543

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=100.00  E-value=1.4e-41  Score=356.35  Aligned_cols=254  Identities=22%  Similarity=0.322  Sum_probs=202.6

Q ss_pred             hcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc-hhhHHHHHHHHHHHhhcCCCceeeeeeeecccc-------
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS-QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQD-------  400 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~-------  400 (653)
                      .++|+..+.||+|+||.||+|++..+++.||||++.... ....+.+.+|+.++++++||||++++++|.+.+       
T Consensus         5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~   84 (332)
T 3qd2_B            5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE   84 (332)
T ss_dssp             HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred             hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence            467888999999999999999999889999999997543 345678999999999999999999999885543       


Q ss_pred             --------------------------------------------------eeEEEEeccCCCCchhhhhcccccccccch
Q 048419          401 --------------------------------------------------ELLLVYDYVPNGSLDKLLFDKDHKLRKLLT  430 (653)
Q Consensus       401 --------------------------------------------------~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~  430 (653)
                                                                        ..++|||||++++|.+++.....  ....+
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~--~~~~~  162 (332)
T 3qd2_B           85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCS--LEDRE  162 (332)
T ss_dssp             HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCS--GGGSC
T ss_pred             hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccC--ccchh
Confidence                                                              37999999999999999987543  34456


Q ss_pred             hhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCCC-----------CcccccccC
Q 048419          431 WDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGAN-----------PQTTHIVGT  499 (653)
Q Consensus       431 ~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~-----------~~~~~~~gt  499 (653)
                      +..++.++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+++.......           .......||
T Consensus       163 ~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt  239 (332)
T 3qd2_B          163 HGVCLHIFIQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGT  239 (332)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-C
T ss_pred             hHHHHHHHHHHHHHHHHHHh---CCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCC
Confidence            77789999999999999999   8999999999999999999999999999987654321           122335699


Q ss_pred             CcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhccCcCCHHHHHHH
Q 048419          500 LGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYYDLAEAELV  579 (653)
Q Consensus       500 ~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l  579 (653)
                      +.|+|||.+.+..++.++|||||||++|||++|..|+.....     ......    ......        ........+
T Consensus       240 ~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~~-----~~~~~~----~~~~~~--------~~~~~~~~~  302 (332)
T 3qd2_B          240 KLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVR-----IITDVR----NLKFPL--------LFTQKYPQE  302 (332)
T ss_dssp             GGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHHH-----HHHHHH----TTCCCH--------HHHHHCHHH
T ss_pred             cCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHHH-----HHHHhh----ccCCCc--------ccccCChhH
Confidence            999999999999999999999999999999998776532211     111111    111111        011233567


Q ss_pred             HHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          580 LNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       580 ~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                      .+++.+||+.||.+|||+.|++++-
T Consensus       303 ~~li~~~l~~~p~~Rps~~~~l~~~  327 (332)
T 3qd2_B          303 HMMVQDMLSPSPTERPEATDIIENA  327 (332)
T ss_dssp             HHHHHHHHCSSGGGSCCHHHHHHST
T ss_pred             HHHHHHHccCCCCcCCCHHHHhhch
Confidence            8999999999999999999999864

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=100.00  E-value=6.1e-42  Score=363.75  Aligned_cols=271  Identities=23%  Similarity=0.332  Sum_probs=215.3

Q ss_pred             ccCHHHHHHhhcCcCcceeeeeeCcEEEEEEE-----eCCCCcEEEEEEeccC-chhhHHHHHHHHHHHhhc-CCCceee
Q 048419          319 RFKYAELASVTKGFGEQNLVGSGGFGRVYRGL-----MPSLGLEVAIKRIGHN-SQQGMKEFVAEIMSMGRL-RHRNLVQ  391 (653)
Q Consensus       319 ~f~~~el~~at~~f~~~~~LG~G~fg~Vy~~~-----~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~niv~  391 (653)
                      .+...+.....++|...+.||+|+||.||+|.     ...+++.||||++... .....+.+.+|+++++++ +||||++
T Consensus        11 ~~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~   90 (359)
T 3vhe_A           11 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN   90 (359)
T ss_dssp             CCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             CCCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceee
Confidence            34445555567889999999999999999998     5556789999999764 344567899999999999 7999999


Q ss_pred             eeeeecccce-eEEEEeccCCCCchhhhhcccccc---------------------------------------------
Q 048419          392 LHGWCRKQDE-LLLVYDYVPNGSLDKLLFDKDHKL---------------------------------------------  425 (653)
Q Consensus       392 l~g~~~~~~~-~~lV~E~~~~gsL~~~l~~~~~~~---------------------------------------------  425 (653)
                      ++++|.+.+. .++||||+++|+|.+++.......                                             
T Consensus        91 ~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (359)
T 3vhe_A           91 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEE  170 (359)
T ss_dssp             EEEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-----------------------------------------
T ss_pred             eeeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccc
Confidence            9999987654 899999999999999997653210                                             


Q ss_pred             ----------------cccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCC
Q 048419          426 ----------------RKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGA  489 (653)
Q Consensus       426 ----------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~  489 (653)
                                      ...+++..++.++.||++||.|||+   ++|+||||||+|||++.++.+||+|||+++......
T Consensus       171 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~  247 (359)
T 3vhe_A          171 KSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP  247 (359)
T ss_dssp             -------------CTTTTCBCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCT
T ss_pred             cccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChhhEEEcCCCcEEEEeccceeeecccc
Confidence                            1228899999999999999999999   899999999999999999999999999998664332


Q ss_pred             C-CcccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhc
Q 048419          490 N-PQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQT  567 (653)
Q Consensus       490 ~-~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~  567 (653)
                      . .......||+.|+|||++.+..++.++|||||||++|||++ |+.||........  +...+....            
T Consensus       248 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~--~~~~~~~~~------------  313 (359)
T 3vhe_A          248 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE--FCRRLKEGT------------  313 (359)
T ss_dssp             TCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH--HHHHHHHTC------------
T ss_pred             cchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHH--HHHHHHcCC------------
Confidence            2 22334568899999999999999999999999999999998 9999976443221  111111100            


Q ss_pred             cCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          568 LDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       568 l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                      ....+......+.+++.+||+.||.+|||+.||+++|+.
T Consensus       314 ~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~  352 (359)
T 3vhe_A          314 RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGN  352 (359)
T ss_dssp             CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             CCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHH
Confidence            001111224568899999999999999999999999964

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=100.00  E-value=2.9e-41  Score=359.33  Aligned_cols=256  Identities=23%  Similarity=0.344  Sum_probs=210.2

Q ss_pred             HhhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC--chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEE
Q 048419          327 SVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLL  404 (653)
Q Consensus       327 ~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  404 (653)
                      ...++|...+.||+|+||.||+|.+..+++.||||++...  .....+.+.+|+.++++++||||+++++++.+.+..++
T Consensus        26 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~l  105 (362)
T 2bdw_A           26 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYL  105 (362)
T ss_dssp             HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             CcccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence            4457899999999999999999999999999999999654  34456788999999999999999999999999999999


Q ss_pred             EEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCC---cEEEEeecC
Q 048419          405 VYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYL---NAKLGDFGL  481 (653)
Q Consensus       405 V~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~---~~kl~DfGl  481 (653)
                      ||||+++|+|.+++...     ..+++.+++.++.||+.||.|||+   ++|+||||||+|||++.++   .+||+|||+
T Consensus       106 v~e~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~  177 (362)
T 2bdw_A          106 VFDLVTGGELFEDIVAR-----EFYSEADASHCIQQILESIAYCHS---NGIVHRNLKPENLLLASKAKGAAVKLADFGL  177 (362)
T ss_dssp             EECCCCSCBHHHHHTTC-----SCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEESCSSTTCCEEECCCTT
T ss_pred             EEecCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCchHHEEEecCCCCCCEEEeecCc
Confidence            99999999999988654     348999999999999999999999   8999999999999997654   599999999


Q ss_pred             cccccCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchh
Q 048419          482 AKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEIT  561 (653)
Q Consensus       482 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~  561 (653)
                      +.......  ......||+.|+|||++.+..++.++|||||||++|||++|+.||.......   +...+......  ..
T Consensus       178 a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~---~~~~i~~~~~~--~~  250 (362)
T 2bdw_A          178 AIEVNDSE--AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHR---LYAQIKAGAYD--YP  250 (362)
T ss_dssp             CBCCTTCC--SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHHHHHHTCCC--CC
T ss_pred             ceEecCCc--ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHH---HHHHHHhCCCC--CC
Confidence            98765322  2234579999999999998899999999999999999999999997654321   11111111000  00


Q ss_pred             HhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          562 QAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       562 ~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                         .+..    ......+.+|+.+||+.||.+||++.|++++-
T Consensus       251 ---~~~~----~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp  286 (362)
T 2bdw_A          251 ---SPEW----DTVTPEAKSLIDSMLTVNPKKRITADQALKVP  286 (362)
T ss_dssp             ---TTGG----GGSCHHHHHHHHHHSCSSGGGSCCHHHHTTSH
T ss_pred             ---cccc----cCCCHHHHHHHHHHcCCChhhCcCHHHHhcCc
Confidence               0000    11235688999999999999999999999764

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=100.00  E-value=4.9e-42  Score=380.34  Aligned_cols=256  Identities=22%  Similarity=0.367  Sum_probs=213.4

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEecc
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYV  409 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~  409 (653)
                      ++|...+.||+|+||.||+|.+..++..||||++.... ...+.|.+|+.+|++++||||++++++|.+.+.+++||||+
T Consensus       220 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~~  298 (495)
T 1opk_A          220 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM  298 (495)
T ss_dssp             GGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred             HHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEcc
Confidence            45778899999999999999998889999999996543 34678999999999999999999999999999999999999


Q ss_pred             CCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCC
Q 048419          410 PNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGA  489 (653)
Q Consensus       410 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~  489 (653)
                      ++|+|.+++....   ...+++..++.++.||+.||+|||+   ++|+||||||+|||++.++.+||+|||+++......
T Consensus       299 ~~g~L~~~l~~~~---~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~  372 (495)
T 1opk_A          299 TYGNLLDYLRECN---RQEVSAVVLLYMATQISSAMEYLEK---KNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDT  372 (495)
T ss_dssp             TTCBHHHHHHHSC---TTTSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECGGGCEEECCTTCEECCTTCC
T ss_pred             CCCCHHHHHHhcC---cCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChhhEEECCCCcEEEeecccceeccCCc
Confidence            9999999997643   3458899999999999999999999   899999999999999999999999999998765433


Q ss_pred             CCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhcc
Q 048419          490 NPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTL  568 (653)
Q Consensus       490 ~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l  568 (653)
                      ........++..|+|||.+....++.++|||||||++|||++ |+.||.......   +.+.+....           . 
T Consensus       373 ~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~---~~~~~~~~~-----------~-  437 (495)
T 1opk_A          373 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ---VYELLEKDY-----------R-  437 (495)
T ss_dssp             EECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG---HHHHHHTTC-----------C-
T ss_pred             eeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHH---HHHHHHcCC-----------C-
Confidence            222233456789999999998899999999999999999999 999997654322   111111110           0 


Q ss_pred             CcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcCC
Q 048419          569 DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLGD  607 (653)
Q Consensus       569 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  607 (653)
                      ...+......+.+|+.+||+.||.+|||+.+|++.|+..
T Consensus       438 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~  476 (495)
T 1opk_A          438 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM  476 (495)
T ss_dssp             CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred             CCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHH
Confidence            111222346788999999999999999999999999864

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=100.00  E-value=4.7e-41  Score=355.83  Aligned_cols=248  Identities=21%  Similarity=0.265  Sum_probs=208.8

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc---hhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS---QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVY  406 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  406 (653)
                      ++|...+.||+|+||.||+|.+..+|+.||||++....   ....+.+.+|+.++++++||||+++++++.+.+.+++||
T Consensus        41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~  120 (350)
T 1rdq_E           41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM  120 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence            57889999999999999999999899999999986532   234567889999999999999999999999999999999


Q ss_pred             eccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccccc
Q 048419          407 DYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE  486 (653)
Q Consensus       407 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~  486 (653)
                      ||+++|+|.+++...     ..+++.+++.++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+++...
T Consensus       121 e~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~  192 (350)
T 1rdq_E          121 EYVAGGEMFSHLRRI-----GRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK  192 (350)
T ss_dssp             ECCTTCBHHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECS
T ss_pred             cCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCccceEEECCCCCEEEcccccceecc
Confidence            999999999999764     348999999999999999999999   999999999999999999999999999998764


Q ss_pred             CCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhh
Q 048419          487 HGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQ  566 (653)
Q Consensus       487 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  566 (653)
                      ..    .....||+.|+|||++.+..++.++|||||||++|||++|+.||.......   +.+.+..    +.       
T Consensus       193 ~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~---~~~~i~~----~~-------  254 (350)
T 1rdq_E          193 GR----TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ---IYEKIVS----GK-------  254 (350)
T ss_dssp             SC----BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHHHHHH----CC-------
T ss_pred             CC----cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHH---HHHHHHc----CC-------
Confidence            32    234579999999999999999999999999999999999999998654321   1111111    10       


Q ss_pred             ccCcCCHHHHHHHHHHHHHcCCCCCCCCCC-----HHHHHHHHc
Q 048419          567 TLDYYDLAEAELVLNLGLFCSAPNPVYRPD-----MRRVVEFLL  605 (653)
Q Consensus       567 ~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs-----~~evl~~L~  605 (653)
                       + .++......+.+++.+||+.||.+||+     +.||+++-.
T Consensus       255 -~-~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h~~  296 (350)
T 1rdq_E          255 -V-RFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW  296 (350)
T ss_dssp             -C-CCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGG
T ss_pred             -C-CCCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhCcC
Confidence             0 011122456889999999999999998     899987543

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=100.00  E-value=5.7e-41  Score=359.76  Aligned_cols=257  Identities=22%  Similarity=0.270  Sum_probs=213.0

Q ss_pred             hhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEe
Q 048419          328 VTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYD  407 (653)
Q Consensus       328 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E  407 (653)
                      ..++|...+.||+|+||.||+|.+..+++.||+|++..........+.+|+.++++++||||+++++++.+.+..++|||
T Consensus        49 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E  128 (387)
T 1kob_A           49 VYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILE  128 (387)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEE
T ss_pred             cccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEE
Confidence            34689999999999999999999999999999999977666666789999999999999999999999999999999999


Q ss_pred             ccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcC--CCcEEEEeecCcccc
Q 048419          408 YVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDT--YLNAKLGDFGLAKIY  485 (653)
Q Consensus       408 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~--~~~~kl~DfGla~~~  485 (653)
                      |+++|+|.+++....    ..+++.+++.++.||+.||.|||+   ++|+||||||+|||++.  ++.+||+|||+++..
T Consensus       129 ~~~gg~L~~~l~~~~----~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~  201 (387)
T 1kob_A          129 FLSGGELFDRIAAED----YKMSEAEVINYMRQACEGLKHMHE---HSIVHLDIKPENIMCETKKASSVKIIDFGLATKL  201 (387)
T ss_dssp             CCCCCBHHHHTTCTT----CCBCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSTTCCCEEECCCTTCEEC
T ss_pred             cCCCCcHHHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccchHHeEEecCCCCceEEEecccceec
Confidence            999999999987542    358999999999999999999999   89999999999999974  577999999999876


Q ss_pred             cCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhh
Q 048419          486 EHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAID  565 (653)
Q Consensus       486 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d  565 (653)
                      ....  ......||+.|+|||++.+..++.++|||||||++|||++|+.||........   ...+......      .+
T Consensus       202 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~---~~~i~~~~~~------~~  270 (387)
T 1kob_A          202 NPDE--IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLET---LQNVKRCDWE------FD  270 (387)
T ss_dssp             CTTS--CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHH---HHHHHHCCCC------CC
T ss_pred             CCCc--ceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHH---HHHHHhCCCC------CC
Confidence            5432  23345799999999999988999999999999999999999999986543221   1111111000      00


Q ss_pred             hccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          566 QTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       566 ~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                         ..........+.+++.+||+.||.+|||+.|++++-.
T Consensus       271 ---~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~hp~  307 (387)
T 1kob_A          271 ---EDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPW  307 (387)
T ss_dssp             ---SSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTSTT
T ss_pred             ---ccccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCcc
Confidence               0001122456889999999999999999999998754

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=100.00  E-value=1.4e-41  Score=367.05  Aligned_cols=270  Identities=23%  Similarity=0.247  Sum_probs=216.6

Q ss_pred             CcccCHHHHHHhhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc---hhhHHHHHHHHHHHhhcCCCceeeee
Q 048419          317 ARRFKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS---QQGMKEFVAEIMSMGRLRHRNLVQLH  393 (653)
Q Consensus       317 ~~~f~~~el~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~  393 (653)
                      +..+.+.++....++|+..++||+|+||.||+++...+|+.||||++.+..   ....+.+.+|..++.+++||||++++
T Consensus        48 ~~~~~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~  127 (412)
T 2vd5_A           48 PIVVRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLH  127 (412)
T ss_dssp             HHHHHHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEE
T ss_pred             hhhhhhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEE
Confidence            344566777777899999999999999999999999899999999996532   22334588999999999999999999


Q ss_pred             eeecccceeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCc
Q 048419          394 GWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLN  473 (653)
Q Consensus       394 g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~  473 (653)
                      +++.+.+.+++||||+++|+|.+++....    ..+++..++.++.||+.||+|||+   ++|+||||||+|||++.+++
T Consensus       128 ~~~~~~~~~~lVmE~~~gg~L~~~l~~~~----~~l~~~~~~~~~~qi~~aL~~LH~---~giiHrDLKp~NILld~~g~  200 (412)
T 2vd5_A          128 FAFQDENYLYLVMEYYVGGDLLTLLSKFG----ERIPAEMARFYLAEIVMAIDSVHR---LGYVHRDIKPDNILLDRCGH  200 (412)
T ss_dssp             EEEECSSEEEEEECCCCSCBHHHHHHHHS----SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSC
T ss_pred             EEEeeCCEEEEEEcCCCCCcHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecccCHHHeeecCCCC
Confidence            99999999999999999999999997542    358999999999999999999999   99999999999999999999


Q ss_pred             EEEEeecCcccccCCCCCcccccccCCcccCccccc-------cCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHH
Q 048419          474 AKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTR-------TGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELL  546 (653)
Q Consensus       474 ~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~  546 (653)
                      +||+|||+++.............+||+.|+|||++.       ...++.++|||||||++|||++|+.||......... 
T Consensus       201 vkL~DFGla~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~-  279 (412)
T 2vd5_A          201 IRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETY-  279 (412)
T ss_dssp             EEECCCTTCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHH-
T ss_pred             EEEeechhheeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHH-
Confidence            999999999876543332333468999999999987       356899999999999999999999999865443211 


Q ss_pred             HHHHHHhhhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCC---CCHHHHHHHHc
Q 048419          547 LVDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYR---PDMRRVVEFLL  605 (653)
Q Consensus       547 l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~R---Ps~~evl~~L~  605 (653)
                        ..+........        +..........+.+|+.+||+ +|.+|   |++.|++++-.
T Consensus       280 --~~i~~~~~~~~--------~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~Hpf  330 (412)
T 2vd5_A          280 --GKIVHYKEHLS--------LPLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTHPF  330 (412)
T ss_dssp             --HHHHTHHHHCC--------CC----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTSGG
T ss_pred             --HHHHhcccCcC--------CCccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcCCC
Confidence              11110000000        000011224678899999999 99998   69999998654

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=100.00  E-value=1e-41  Score=357.71  Aligned_cols=254  Identities=24%  Similarity=0.352  Sum_probs=200.3

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcE----EEEEEeccC-chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLE----VAIKRIGHN-SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLL  404 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~----vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  404 (653)
                      ++|+..+.||+|+||.||+|.+..+++.    ||+|.+... .....+.+.+|+.++++++||||++++++|.+.+ .++
T Consensus        15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~   93 (327)
T 3poz_A           15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL   93 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EEE
T ss_pred             HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEE
Confidence            5688899999999999999998766654    588887543 3345678999999999999999999999998765 789


Q ss_pred             EEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccc
Q 048419          405 VYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKI  484 (653)
Q Consensus       405 V~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~  484 (653)
                      |+||+++|+|.+++....    ..+++..++.++.||+.||.|||+   ++|+||||||+|||++.++++||+|||+++.
T Consensus        94 v~e~~~~g~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~  166 (327)
T 3poz_A           94 ITQLMPFGCLLDYVREHK----DNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKL  166 (327)
T ss_dssp             EEECCTTCBHHHHHHHST----TSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEETTEEEECCTTHHHH
T ss_pred             EEEecCCCcHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHhh---CCeeCCCCChheEEECCCCCEEEccCcceeE
Confidence            999999999999997653    458999999999999999999999   8999999999999999999999999999987


Q ss_pred             ccCCCCC-cccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhhcccchhH
Q 048419          485 YEHGANP-QTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELHLEGEITQ  562 (653)
Q Consensus       485 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~  562 (653)
                      ....... ......+|+.|+|||.+.+..++.++|||||||++|||++ |+.||.......   +...+.....      
T Consensus       167 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~---~~~~~~~~~~------  237 (327)
T 3poz_A          167 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---ISSILEKGER------  237 (327)
T ss_dssp             HTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG---HHHHHHTTCC------
T ss_pred             ccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHH---HHHHHHcCCC------
Confidence            6543322 2233456889999999999999999999999999999999 999997654322   1111111100      


Q ss_pred             hhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          563 AIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       563 ~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                            ...+......+.+++.+||+.||.+||++.|++++|+.
T Consensus       238 ------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~  275 (327)
T 3poz_A          238 ------LPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSK  275 (327)
T ss_dssp             ------CCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHH
T ss_pred             ------CCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHH
Confidence                  11112234578899999999999999999999998864

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=100.00  E-value=4.3e-41  Score=356.59  Aligned_cols=258  Identities=20%  Similarity=0.282  Sum_probs=208.0

Q ss_pred             hcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc-----hhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeE
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS-----QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELL  403 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~  403 (653)
                      .++|...+.||+|+||.||+|.+..+++.||||++....     ....+.+.+|+.++++++||||+++++++.+.+.++
T Consensus        23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~  102 (351)
T 3c0i_A           23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY  102 (351)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred             ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence            457888999999999999999999999999999985421     224678899999999999999999999999999999


Q ss_pred             EEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCc---EEEEeec
Q 048419          404 LVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLN---AKLGDFG  480 (653)
Q Consensus       404 lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~---~kl~DfG  480 (653)
                      +|||||++++|.+++...... ...+++..++.++.||+.||.|||+   ++|+||||||+|||++.++.   +||+|||
T Consensus       103 lv~e~~~g~~L~~~l~~~~~~-~~~~~~~~~~~i~~qi~~al~~lH~---~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg  178 (351)
T 3c0i_A          103 MVFEFMDGADLCFEIVKRADA-GFVYSEAVASHYMRQILEALRYCHD---NNIIHRDVKPHCVLLASKENSAPVKLGGFG  178 (351)
T ss_dssp             EEEECCSSCBHHHHHHHHHHT-TCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECSSSTTCCEEECCCT
T ss_pred             EEEeCCCCCCHHHHHHHhccc-CCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCChHHeEEecCCCCCcEEEecCc
Confidence            999999999999888654321 3358899999999999999999999   89999999999999977655   9999999


Q ss_pred             CcccccCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccch
Q 048419          481 LAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEI  560 (653)
Q Consensus       481 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~  560 (653)
                      +++...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||......   ..........   ..
T Consensus       179 ~a~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~---~~~~i~~~~~---~~  251 (351)
T 3c0i_A          179 VAIQLGESG-LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKER---LFEGIIKGKY---KM  251 (351)
T ss_dssp             TCEECCTTS-CBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHHH---HHHHHHHTCC---CC
T ss_pred             ceeEecCCC-eeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHHH---HHHHHHcCCC---CC
Confidence            998765432 2233457999999999999889999999999999999999999999864321   1111111100   00


Q ss_pred             hHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          561 TQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       561 ~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                      ....   ..    .....+.+|+.+||+.||.+|||+.|++++-
T Consensus       252 ~~~~---~~----~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp  288 (351)
T 3c0i_A          252 NPRQ---WS----HISESAKDLVRRMLMLDPAERITVYEALNHP  288 (351)
T ss_dssp             CHHH---HT----TSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred             Cccc---cc----cCCHHHHHHHHHHCCCChhHCcCHHHHhcCh
Confidence            0000   00    1235688999999999999999999999754

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=100.00  E-value=9.1e-42  Score=361.65  Aligned_cols=251  Identities=22%  Similarity=0.323  Sum_probs=204.6

Q ss_pred             hcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC---chhhHHHHHHHHHHHhhc-CCCceeeeeeeecccceeEE
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN---SQQGMKEFVAEIMSMGRL-RHRNLVQLHGWCRKQDELLL  404 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~l  404 (653)
                      -++|+..++||+|+||.||+|++..+++.||||++...   .....+.+..|..+++.+ +||||+++++++.+.+.+++
T Consensus        22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l  101 (353)
T 3txo_A           22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFF  101 (353)
T ss_dssp             -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred             hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEE
Confidence            36799999999999999999999999999999999653   234456788999999988 69999999999999999999


Q ss_pred             EEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccc
Q 048419          405 VYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKI  484 (653)
Q Consensus       405 V~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~  484 (653)
                      ||||+++|+|.+++...     ..+++.+++.++.||+.||+|||+   ++|+||||||+||||+.++.+||+|||+++.
T Consensus       102 v~E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NILl~~~g~ikL~DFG~a~~  173 (353)
T 3txo_A          102 VMEFVNGGDLMFHIQKS-----RRFDEARARFYAAEIISALMFLHD---KGIIYRDLKLDNVLLDHEGHCKLADFGMCKE  173 (353)
T ss_dssp             EEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred             EEeCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCCcccCCCHHHEEECCCCCEEEccccceee
Confidence            99999999999999764     348999999999999999999999   8999999999999999999999999999985


Q ss_pred             ccCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhh
Q 048419          485 YEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAI  564 (653)
Q Consensus       485 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  564 (653)
                      .... .......+||+.|+|||++.+..++.++|||||||++|||++|+.||........   .+.+..           
T Consensus       174 ~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~---~~~i~~-----------  238 (353)
T 3txo_A          174 GICN-GVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDL---FEAILN-----------  238 (353)
T ss_dssp             SCC----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH---HHHHHH-----------
T ss_pred             cccC-CccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHH---HHHHHc-----------
Confidence            4322 2233446799999999999988899999999999999999999999986544321   111111           


Q ss_pred             hhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCH------HHHHHHH
Q 048419          565 DQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDM------RRVVEFL  604 (653)
Q Consensus       565 d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~------~evl~~L  604 (653)
                       ... .++......+.+++.+||+.||.+||++      .|++++-
T Consensus       239 -~~~-~~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~hp  282 (353)
T 3txo_A          239 -DEV-VYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHP  282 (353)
T ss_dssp             -CCC-CCCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTSG
T ss_pred             -CCC-CCCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhhCC
Confidence             000 1111234568899999999999999998      7888654

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=100.00  E-value=7.4e-42  Score=359.73  Aligned_cols=255  Identities=24%  Similarity=0.354  Sum_probs=208.6

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc---hhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS---QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVY  406 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  406 (653)
                      ++|...+.||+|+||.||+|.+..+++.||||++....   .+..+.+.+|+.+++.++||||+++++++...+..++||
T Consensus         9 ~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~   88 (336)
T 3h4j_B            9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVI   88 (336)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             CCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            57889999999999999999998899999999986431   222457889999999999999999999999999999999


Q ss_pred             eccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccccc
Q 048419          407 DYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE  486 (653)
Q Consensus       407 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~  486 (653)
                      ||+ +|+|.+++...     ..+++.+++.++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||++....
T Consensus        89 E~~-~g~l~~~l~~~-----~~l~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~  159 (336)
T 3h4j_B           89 EYA-GGELFDYIVEK-----KRMTEDEGRRFFQQIICAIEYCHR---HKIVHRDLKPENLLLDDNLNVKIADFGLSNIMT  159 (336)
T ss_dssp             CCC-CEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHH---HTCCCCCCSTTTEEECTTCCEEECCSSCTBTTT
T ss_pred             ECC-CCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCchhhEEEcCCCCEEEEEeccceecc
Confidence            999 78999888654     348999999999999999999999   899999999999999999999999999998764


Q ss_pred             CCCCCcccccccCCcccCccccccCCC-CCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhh
Q 048419          487 HGANPQTTHIVGTLGYLAPELTRTGKA-TTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAID  565 (653)
Q Consensus       487 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d  565 (653)
                      ...  ......||+.|+|||.+.+..+ +.++|||||||++|||++|+.||.......                +...+.
T Consensus       160 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~----------------~~~~i~  221 (336)
T 3h4j_B          160 DGN--FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPN----------------LFKKVN  221 (336)
T ss_dssp             TSB--TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTT----------------CBCCCC
T ss_pred             CCc--ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHH----------------HHHHHH
Confidence            432  2334579999999999987775 689999999999999999999997543211                001111


Q ss_pred             hccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcCCCCCC
Q 048419          566 QTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLGDSSLP  611 (653)
Q Consensus       566 ~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~p  611 (653)
                      ......+......+.+|+.+||+.||.+|||+.|++++-.....+|
T Consensus       222 ~~~~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~~~~  267 (336)
T 3h4j_B          222 SCVYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRDPWFNVNLP  267 (336)
T ss_dssp             SSCCCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTCHHHHTTCC
T ss_pred             cCCCCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhChhhccCCc
Confidence            1111112223466889999999999999999999998765443333

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=100.00  E-value=4.3e-41  Score=346.89  Aligned_cols=269  Identities=24%  Similarity=0.301  Sum_probs=207.6

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC--chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEe
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYD  407 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E  407 (653)
                      ++|+..+.||+|+||+||+|.+..+++.||||++...  .....+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   81 (292)
T 3o0g_A            2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE   81 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence            4688899999999999999999999999999999654  33445788899999999999999999999999999999999


Q ss_pred             ccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccC
Q 048419          408 YVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEH  487 (653)
Q Consensus       408 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~  487 (653)
                      |+++ +|.+++...    ...+++.+++.++.|++.||+|||+   ++|+||||||+|||++.++.+||+|||+++....
T Consensus        82 ~~~~-~l~~~~~~~----~~~l~~~~~~~~~~ql~~~l~~lH~---~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~  153 (292)
T 3o0g_A           82 FCDQ-DLKKYFDSC----NGDLDPEIVKSFLFQLLKGLGFCHS---RNVLHRDLKPQNLLINRNGELKLANFGLARAFGI  153 (292)
T ss_dssp             CCSE-EHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECCS
T ss_pred             cCCC-CHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEeecccceecCC
Confidence            9975 666655443    2358999999999999999999999   8999999999999999999999999999987643


Q ss_pred             CCCCcccccccCCcccCccccccCC-CCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhc--ccchhHh-
Q 048419          488 GANPQTTHIVGTLGYLAPELTRTGK-ATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHL--EGEITQA-  563 (653)
Q Consensus       488 ~~~~~~~~~~gt~~y~aPE~~~~~~-~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~--~~~~~~~-  563 (653)
                      .. .......||+.|+|||.+.+.. ++.++|||||||++|||++|+.|+........ .+.........  ....... 
T Consensus       154 ~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~  231 (292)
T 3o0g_A          154 PV-RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDD-QLKRIFRLLGTPTEEQWPSMT  231 (292)
T ss_dssp             CC-SCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHH-HHHHHHHHHCCCCTTTCTTGG
T ss_pred             cc-ccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHH-HHHHHHHHhCCCChhhhhhhc
Confidence            22 2233457899999999997765 79999999999999999999888644332221 11111111100  0000000 


Q ss_pred             --hh----------hccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcCCC
Q 048419          564 --ID----------QTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLGDS  608 (653)
Q Consensus       564 --~d----------~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  608 (653)
                        .+          ..+..........+.+++.+||+.||.+|||+.|++++-....
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~  288 (292)
T 3o0g_A          232 KLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSD  288 (292)
T ss_dssp             GSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTT
T ss_pred             ccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcCccccc
Confidence              00          0000111223467889999999999999999999998765443

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=100.00  E-value=2.7e-41  Score=349.51  Aligned_cols=250  Identities=23%  Similarity=0.333  Sum_probs=199.0

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCch--------------------------hhHHHHHHHHHHHhh
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQ--------------------------QGMKEFVAEIMSMGR  383 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~--------------------------~~~~~~~~E~~~l~~  383 (653)
                      ++|...+.||+|+||.||+|.+..+++.||||++.....                          ...+.+.+|++++++
T Consensus        13 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~   92 (298)
T 2zv2_A           13 NQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKK   92 (298)
T ss_dssp             TTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHT
T ss_pred             cceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHh
Confidence            578899999999999999999998999999999865421                          123568899999999


Q ss_pred             cCCCceeeeeeeecc--cceeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCC
Q 048419          384 LRHRNLVQLHGWCRK--QDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDV  461 (653)
Q Consensus       384 l~H~niv~l~g~~~~--~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dl  461 (653)
                      ++||||+++++++.+  .+..++||||+++++|.+++..      ..+++.+++.++.||++||.|||+   ++|+||||
T Consensus        93 l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dl  163 (298)
T 2zv2_A           93 LDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL------KPLSEDQARFYFQDLIKGIEYLHY---QKIIHRDI  163 (298)
T ss_dssp             CCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS------SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCC
T ss_pred             CCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCC
Confidence            999999999999976  5678999999999999887643      348999999999999999999999   89999999


Q ss_pred             CCCcEEEcCCCcEEEEeecCcccccCCCCCcccccccCCcccCccccccCC---CCCccceeehHHHHHHHHhCCCCCCh
Q 048419          462 KPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGK---ATTSTDVYSYGILMLEVACGRRSIEP  538 (653)
Q Consensus       462 kp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~ksDV~s~Gvvl~elltG~~p~~~  538 (653)
                      ||+|||++.++.+||+|||+++...... .......||+.|+|||.+.+..   ++.++|||||||++|||++|+.||..
T Consensus       164 kp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~  242 (298)
T 2zv2_A          164 KPSNLLVGEDGHIKIADFGVSNEFKGSD-ALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMD  242 (298)
T ss_dssp             CGGGEEECTTSCEEECCCTTCEECSSSS-CEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             CHHHEEECCCCCEEEecCCCcccccccc-ccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCC
Confidence            9999999999999999999998765432 2233457999999999997665   37789999999999999999999976


Q ss_pred             hhhhhHHHHHHHHHhhhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 048419          539 QKAAAELLLVDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEF  603 (653)
Q Consensus       539 ~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  603 (653)
                      .....   +...+.....  ..     +    ........+.+++.+||+.||.+||++.|++++
T Consensus       243 ~~~~~---~~~~~~~~~~--~~-----~----~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~h  293 (298)
T 2zv2_A          243 ERIMC---LHSKIKSQAL--EF-----P----DQPDIAEDLKDLITRMLDKNPESRIVVPEIKLH  293 (298)
T ss_dssp             SSHHH---HHHHHHHCCC--CC-----C----SSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTC
T ss_pred             ccHHH---HHHHHhcccC--CC-----C----CccccCHHHHHHHHHHhhcChhhCCCHHHHhcC
Confidence            44321   1111111000  00     0    001123568899999999999999999999865

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=100.00  E-value=4.9e-41  Score=366.41  Aligned_cols=258  Identities=23%  Similarity=0.286  Sum_probs=210.1

Q ss_pred             HhhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc--hhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEE
Q 048419          327 SVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS--QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLL  404 (653)
Q Consensus       327 ~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  404 (653)
                      ...++|...+.||+|+||.||+|.+..+|+.+|+|++....  ....+.+.+|+.++++++||||+++++++.+.+..++
T Consensus         8 ~~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l   87 (444)
T 3soa_A            8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYL   87 (444)
T ss_dssp             HHHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEE
T ss_pred             cccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEE
Confidence            45678999999999999999999999999999999996543  3445678999999999999999999999999999999


Q ss_pred             EEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEc---CCCcEEEEeecC
Q 048419          405 VYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLD---TYLNAKLGDFGL  481 (653)
Q Consensus       405 V~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~---~~~~~kl~DfGl  481 (653)
                      ||||+++|+|.+++...     ..+++.++..++.||+.||.|||+   ++|+||||||+|||++   .++.+||+|||+
T Consensus        88 v~E~~~gg~L~~~i~~~-----~~~~e~~~~~i~~qil~aL~~lH~---~givHrDlKp~NIll~~~~~~~~vkL~DFG~  159 (444)
T 3soa_A           88 IFDLVTGGELFEDIVAR-----EYYSEADASHCIQQILEAVLHCHQ---MGVVHRNLKPENLLLASKLKGAAVKLADFGL  159 (444)
T ss_dssp             EECCCBCCBHHHHHHHC-----SCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSSTTEEESBSSTTCCEEECCCSS
T ss_pred             EEEeCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEeccCCCCcEEEccCce
Confidence            99999999999998764     348999999999999999999999   8999999999999998   467899999999


Q ss_pred             cccccCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchh
Q 048419          482 AKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEIT  561 (653)
Q Consensus       482 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~  561 (653)
                      ++...... .......||+.|+|||++.+..++.++||||+||++|||++|+.||.......   +...+.....  ...
T Consensus       160 a~~~~~~~-~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~---~~~~i~~~~~--~~~  233 (444)
T 3soa_A          160 AIEVEGEQ-QAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHR---LYQQIKAGAY--DFP  233 (444)
T ss_dssp             CBCCCTTC-CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH---HHHHHHHTCC--CCC
T ss_pred             eEEecCCC-ceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHH---HHHHHHhCCC--CCC
Confidence            98765432 22334679999999999999899999999999999999999999997654322   1111111100  000


Q ss_pred             HhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          562 QAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       562 ~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                         .+..    ......+.+|+.+||+.||.+|||+.|++++-.
T Consensus       234 ---~~~~----~~~s~~~~~li~~~L~~dP~~Rpta~e~L~hp~  270 (444)
T 3soa_A          234 ---SPEW----DTVTPEAKDLINKMLTINPSKRITAAEALKHPW  270 (444)
T ss_dssp             ---TTTT----TTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSCT
T ss_pred             ---cccc----ccCCHHHHHHHHHHcCCChhHCCCHHHHhcCcc
Confidence               0000    112456889999999999999999999998643

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=100.00  E-value=5.8e-41  Score=346.45  Aligned_cols=260  Identities=18%  Similarity=0.194  Sum_probs=210.1

Q ss_pred             hcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhc-CCCceeeeeeeecccceeEEEEe
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRL-RHRNLVQLHGWCRKQDELLLVYD  407 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~E  407 (653)
                      .++|...+.||+|+||.||+|.+..+++.||||++....  ..+.+.+|+..++++ +|+|++++++++.+....++|||
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e   86 (298)
T 1csn_A            9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID   86 (298)
T ss_dssp             TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEE
T ss_pred             ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEE
Confidence            467899999999999999999998889999999986442  234578899999999 79999999999999999999999


Q ss_pred             ccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCc-----EEEEeecCc
Q 048419          408 YVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLN-----AKLGDFGLA  482 (653)
Q Consensus       408 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~-----~kl~DfGla  482 (653)
                      |+ +++|.+++....    ..+++.+++.++.||++||+|||+   ++|+||||||+|||++.++.     +||+|||++
T Consensus        87 ~~-~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~  158 (298)
T 1csn_A           87 LL-GPSLEDLLDLCG----RKFSVKTVAMAAKQMLARVQSIHE---KSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMV  158 (298)
T ss_dssp             CC-CCBHHHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECCSSSTTTTCEEECCCTTC
T ss_pred             ec-CCCHHHHHHHhc----cCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEeccCCCCCCCeEEEEECccc
Confidence            99 999999997643    348999999999999999999999   89999999999999987776     999999999


Q ss_pred             ccccCCCCC------cccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhc
Q 048419          483 KIYEHGANP------QTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHL  556 (653)
Q Consensus       483 ~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~  556 (653)
                      +........      ......||+.|+|||.+.+..++.++|||||||++|||++|+.||..............+.....
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~  238 (298)
T 1csn_A          159 KFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQ  238 (298)
T ss_dssp             EESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHH
T ss_pred             cccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhcc
Confidence            876543221      23445799999999999998999999999999999999999999986433222111111111111


Q ss_pred             ccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          557 EGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       557 ~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                      .....+..    .    .....+.+++.+||+.||.+||++.+|++.|+.
T Consensus       239 ~~~~~~~~----~----~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~  280 (298)
T 1csn_A          239 STPLRELC----A----GFPEEFYKYMHYARNLAFDATPDYDYLQGLFSK  280 (298)
T ss_dssp             HSCHHHHT----T----TSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHH
T ss_pred             CccHHHHH----h----hCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHH
Confidence            11111110    0    124678899999999999999999999998864

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=100.00  E-value=1.3e-41  Score=358.66  Aligned_cols=262  Identities=23%  Similarity=0.368  Sum_probs=211.9

Q ss_pred             hhcCcCcceeeeeeCcEEEEEEEeCC-----CCcEEEEEEeccC-chhhHHHHHHHHHHHhhcCCCceeeeeeeecccce
Q 048419          328 VTKGFGEQNLVGSGGFGRVYRGLMPS-----LGLEVAIKRIGHN-SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDE  401 (653)
Q Consensus       328 at~~f~~~~~LG~G~fg~Vy~~~~~~-----~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~  401 (653)
                      ..++|...+.||+|+||.||+|.+..     +++.||||++... .....+.+.+|+.++++++||||++++++|.+.+.
T Consensus        45 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~  124 (343)
T 1luf_A           45 PRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKP  124 (343)
T ss_dssp             CGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS
T ss_pred             cHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCc
Confidence            35678889999999999999999863     4589999999765 34456789999999999999999999999999999


Q ss_pred             eEEEEeccCCCCchhhhhcccccc-------------------cccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCC
Q 048419          402 LLLVYDYVPNGSLDKLLFDKDHKL-------------------RKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVK  462 (653)
Q Consensus       402 ~~lV~E~~~~gsL~~~l~~~~~~~-------------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlk  462 (653)
                      .++||||+++|+|.+++.......                   ...+++.+++.++.||++||.|||+   ++|+|||||
T Consensus       125 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlk  201 (343)
T 1luf_A          125 MCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSE---RKFVHRDLA  201 (343)
T ss_dssp             CEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCS
T ss_pred             eEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCC
Confidence            999999999999999997643110                   1468999999999999999999999   899999999


Q ss_pred             CCcEEEcCCCcEEEEeecCcccccCCCC-CcccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhh
Q 048419          463 PSNILLDTYLNAKLGDFGLAKIYEHGAN-PQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQK  540 (653)
Q Consensus       463 p~NIll~~~~~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~  540 (653)
                      |+|||++.++.+||+|||+++....... .......+|+.|+|||.+.+..++.++|||||||++|||++ |+.||....
T Consensus       202 p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~  281 (343)
T 1luf_A          202 TRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMA  281 (343)
T ss_dssp             GGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC
T ss_pred             cceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCC
Confidence            9999999999999999999986543221 22233467889999999998899999999999999999999 999997654


Q ss_pred             hhhHHHHHHHHHhhhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcCC
Q 048419          541 AAAELLLVDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLGD  607 (653)
Q Consensus       541 ~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  607 (653)
                      ...   +...+.    .+..        ...+......+.+++.+||+.||.+||++.+++++|+..
T Consensus       282 ~~~---~~~~~~----~~~~--------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~  333 (343)
T 1luf_A          282 HEE---VIYYVR----DGNI--------LACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRM  333 (343)
T ss_dssp             HHH---HHHHHH----TTCC--------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHT
T ss_pred             hHH---HHHHHh----CCCc--------CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHH
Confidence            322   111111    1111        111122346788999999999999999999999999764

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=100.00  E-value=3e-41  Score=362.24  Aligned_cols=257  Identities=21%  Similarity=0.290  Sum_probs=204.8

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC---chhhHHHHHHHHHHHhhc-CCCceeeeeeeecccceeEEE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN---SQQGMKEFVAEIMSMGRL-RHRNLVQLHGWCRKQDELLLV  405 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV  405 (653)
                      ++|+..++||+|+||.||+|++..+++.||||++.+.   .....+.+..|..++.++ +||||+++++++.+.+.+++|
T Consensus        52 ~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV  131 (396)
T 4dc2_A           52 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV  131 (396)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred             hHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEE
Confidence            5688999999999999999999999999999999754   223345678899999887 899999999999999999999


Q ss_pred             EeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccc
Q 048419          406 YDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIY  485 (653)
Q Consensus       406 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~  485 (653)
                      |||+++|+|..++...     ..+++..++.++.||+.||.|||+   ++|+||||||+||||+.++.+||+|||+++..
T Consensus       132 ~E~~~gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~LH~---~givHrDLKp~NILl~~~g~ikL~DFGla~~~  203 (396)
T 4dc2_A          132 IEYVNGGDLMFHMQRQ-----RKLPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG  203 (396)
T ss_dssp             EECCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred             EEcCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCEEeccCCHHHEEECCCCCEEEeecceeeec
Confidence            9999999999998754     348999999999999999999999   89999999999999999999999999999853


Q ss_pred             cCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHH--HHHHHHHhhhcccchhHh
Q 048419          486 EHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAEL--LLVDWVKELHLEGEITQA  563 (653)
Q Consensus       486 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~--~l~~~~~~~~~~~~~~~~  563 (653)
                      ... .......+||+.|+|||++.+..++.++|||||||++|||++|+.||.........  ...+.+....        
T Consensus       204 ~~~-~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i--------  274 (396)
T 4dc2_A          204 LRP-GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVI--------  274 (396)
T ss_dssp             CCT-TCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHH--------
T ss_pred             ccC-CCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHH--------
Confidence            222 22344568999999999999999999999999999999999999999643211100  0000011100        


Q ss_pred             hhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCH------HHHHHHH
Q 048419          564 IDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDM------RRVVEFL  604 (653)
Q Consensus       564 ~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~------~evl~~L  604 (653)
                      .... ..++......+.+|+.+||+.||.+||++      .||+++-
T Consensus       275 ~~~~-~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~Hp  320 (396)
T 4dc2_A          275 LEKQ-IRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHP  320 (396)
T ss_dssp             HHCC-CCCCTTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHST
T ss_pred             hccc-cCCCCcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcCc
Confidence            0011 11122234678899999999999999985      6777654

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=100.00  E-value=1.7e-41  Score=348.03  Aligned_cols=254  Identities=24%  Similarity=0.368  Sum_probs=205.7

Q ss_pred             hcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEec
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDY  408 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~  408 (653)
                      .++|...+.||+|+||.||+|.+. ++..||||++..... ..+.+.+|++++++++|+||+++++++.+.+..++||||
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  100 (283)
T 3gen_A           23 PKDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEY  100 (283)
T ss_dssp             GGGEEEEEECC---CEEEEEEEET-TTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECC
T ss_pred             HHHHHhHhhcCCCCCceEEEEEEc-CCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEec
Confidence            467888999999999999999987 477899999975432 346789999999999999999999999999999999999


Q ss_pred             cCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCC
Q 048419          409 VPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHG  488 (653)
Q Consensus       409 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~  488 (653)
                      +++++|.+++....    ..+++.+++.++.|++.||.|||+   ++|+||||||+||+++.++.+||+|||+++.....
T Consensus       101 ~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~  173 (283)
T 3gen_A          101 MANGCLLNYLREMR----HRFQTQQLLEMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD  173 (283)
T ss_dssp             CTTCBHHHHHHCGG----GCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCH
T ss_pred             cCCCcHHHHHHHhc----cCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCccceEEEcCCCCEEEcccccccccccc
Confidence            99999999997642    348999999999999999999999   89999999999999999999999999999865432


Q ss_pred             CCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhc
Q 048419          489 ANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQT  567 (653)
Q Consensus       489 ~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~  567 (653)
                      .........+|+.|+|||.+.+..++.++||||||+++|||++ |+.||.........   ..+....         .  
T Consensus       174 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~---~~~~~~~---------~--  239 (283)
T 3gen_A          174 EYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETA---EHIAQGL---------R--  239 (283)
T ss_dssp             HHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHH---HHHHTTC---------C--
T ss_pred             ccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHH---HHHhccc---------C--
Confidence            2222233456788999999998899999999999999999998 99999865432211   1111100         0  


Q ss_pred             cCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          568 LDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       568 l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                       ...+......+.+++.+||+.||.+|||+.|++++|..
T Consensus       240 -~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~  277 (283)
T 3gen_A          240 -LYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILD  277 (283)
T ss_dssp             -CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred             -CCCCCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHH
Confidence             01111123578899999999999999999999999863

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=4.8e-41  Score=354.86  Aligned_cols=267  Identities=24%  Similarity=0.264  Sum_probs=209.3

Q ss_pred             HHHHHhhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC-----chhhHHHHHHHHHHHhhcCCCceeeeeeeec
Q 048419          323 AELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN-----SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR  397 (653)
Q Consensus       323 ~el~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~  397 (653)
                      .++..+.++|...+.||+|+||.||+|.+..++..||+|++...     .....+.+.+|+.++++++||||+++++++.
T Consensus        19 ~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~   98 (345)
T 3hko_A           19 GSLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYE   98 (345)
T ss_dssp             BCHHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred             chhhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhc
Confidence            34567788999999999999999999999999999999998643     3445678999999999999999999999999


Q ss_pred             ccceeEEEEeccCCCCchhhhhcccc-----------------------------------cccccchhhhHHHHHHHHH
Q 048419          398 KQDELLLVYDYVPNGSLDKLLFDKDH-----------------------------------KLRKLLTWDQRYKILIGIA  442 (653)
Q Consensus       398 ~~~~~~lV~E~~~~gsL~~~l~~~~~-----------------------------------~~~~~l~~~~~~~i~~~ia  442 (653)
                      +.+..++||||+++|+|.+++.....                                   .....+++..++.++.||+
T Consensus        99 ~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~  178 (345)
T 3hko_A           99 DEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIF  178 (345)
T ss_dssp             CSSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHH
T ss_pred             cCCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHH
Confidence            99999999999999999999853111                                   0122357788899999999


Q ss_pred             HHHHHHHhcCCCCeEecCCCCCcEEEcCCC--cEEEEeecCcccccCCCC---CcccccccCCcccCcccccc--CCCCC
Q 048419          443 QSLLYLHEECNQRVVHRDVKPSNILLDTYL--NAKLGDFGLAKIYEHGAN---PQTTHIVGTLGYLAPELTRT--GKATT  515 (653)
Q Consensus       443 ~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~--~~kl~DfGla~~~~~~~~---~~~~~~~gt~~y~aPE~~~~--~~~~~  515 (653)
                      +||+|||+   ++|+||||||+|||++.++  .+||+|||+++.......   .......||+.|+|||.+.+  ..++.
T Consensus       179 ~~l~~LH~---~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  255 (345)
T 3hko_A          179 SALHYLHN---QGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGP  255 (345)
T ss_dssp             HHHHHHHH---TTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCT
T ss_pred             HHHHHHHH---CCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCc
Confidence            99999999   8999999999999998776  899999999986543221   12344579999999999875  67889


Q ss_pred             ccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCC
Q 048419          516 STDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRP  595 (653)
Q Consensus       516 ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RP  595 (653)
                      ++|||||||++|||++|+.||.........  ........   ...   .+..    ......+.+++.+||+.||.+||
T Consensus       256 ~~DiwslG~il~el~~g~~pf~~~~~~~~~--~~~~~~~~---~~~---~~~~----~~~~~~~~~li~~~l~~~p~~Rp  323 (345)
T 3hko_A          256 KCDAWSAGVLLHLLLMGAVPFPGVNDADTI--SQVLNKKL---CFE---NPNY----NVLSPLARDLLSNLLNRNVDERF  323 (345)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSSCCSSHHHHH--HHHHHCCC---CTT---SGGG----GGSCHHHHHHHHHHSCSCTTTSC
T ss_pred             HHHHHHHHHHHHHHHHCCCCCCCCChHHHH--HHHHhccc---ccC---Cccc----ccCCHHHHHHHHHHcCCChhHCC
Confidence            999999999999999999999765443211  11111100   000   0000    01235688999999999999999


Q ss_pred             CHHHHHHHH
Q 048419          596 DMRRVVEFL  604 (653)
Q Consensus       596 s~~evl~~L  604 (653)
                      ++.|++++-
T Consensus       324 s~~~~l~hp  332 (345)
T 3hko_A          324 DAMRALQHP  332 (345)
T ss_dssp             CHHHHHHSH
T ss_pred             CHHHHhcCh
Confidence            999999864

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=100.00  E-value=1e-41  Score=363.63  Aligned_cols=259  Identities=23%  Similarity=0.332  Sum_probs=208.4

Q ss_pred             cCcCcceeeeeeCcEEEEEEEe-----CCCCcEEEEEEeccC-chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLM-----PSLGLEVAIKRIGHN-SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELL  403 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~-----~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~  403 (653)
                      ++|...+.||+|+||.||+|.+     ..++..||||++... .......+.+|+.++++++||||+++++++.+.+..+
T Consensus        71 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~  150 (367)
T 3l9p_A           71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRF  150 (367)
T ss_dssp             GGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred             hHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCE
Confidence            5678899999999999999994     345778999999654 4455667899999999999999999999999999999


Q ss_pred             EEEeccCCCCchhhhhccccc--ccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCC---cEEEEe
Q 048419          404 LVYDYVPNGSLDKLLFDKDHK--LRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYL---NAKLGD  478 (653)
Q Consensus       404 lV~E~~~~gsL~~~l~~~~~~--~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~---~~kl~D  478 (653)
                      +||||+++|+|.+++......  ....+++.+++.++.||++||+|||+   ++|+||||||+|||++.++   .+||+|
T Consensus       151 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~~~~kL~D  227 (367)
T 3l9p_A          151 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVAKIGD  227 (367)
T ss_dssp             EEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSSTTCCEEECC
T ss_pred             EEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChhhEEEecCCCCceEEECC
Confidence            999999999999999765321  12458999999999999999999999   8999999999999998555   599999


Q ss_pred             ecCcccccCC-CCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhhc
Q 048419          479 FGLAKIYEHG-ANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELHL  556 (653)
Q Consensus       479 fGla~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~  556 (653)
                      ||+++..... .........||+.|+|||.+.+..++.++|||||||++|||++ |+.||.......   +.+.+.... 
T Consensus       228 FG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~---~~~~i~~~~-  303 (367)
T 3l9p_A          228 FGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE---VLEFVTSGG-  303 (367)
T ss_dssp             CHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH---HHHHHHTTC-
T ss_pred             CccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH---HHHHHHcCC-
Confidence            9999855322 1222334567899999999999999999999999999999998 999997654322   111111110 


Q ss_pred             ccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          557 EGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       557 ~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                                 ...........+.+|+.+||+.||.+||++.+|+++|+.
T Consensus       304 -----------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~  342 (367)
T 3l9p_A          304 -----------RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEY  342 (367)
T ss_dssp             -----------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             -----------CCCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence                       001111234568899999999999999999999999965

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=100.00  E-value=3.8e-41  Score=353.73  Aligned_cols=258  Identities=19%  Similarity=0.193  Sum_probs=208.4

Q ss_pred             hcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhc-CCCceeeeeeeecccceeEEEEe
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRL-RHRNLVQLHGWCRKQDELLLVYD  407 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~E  407 (653)
                      .++|...+.||+|+||.||+|....+++.||||++.....  .+.+.+|+.+++++ +|+||+++++++...+..++|||
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e   85 (330)
T 2izr_A            8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLE   85 (330)
T ss_dssp             TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEE
T ss_pred             cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEE
Confidence            4678999999999999999999988899999999865432  24578999999999 99999999999999999999999


Q ss_pred             ccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCc-----EEEEeecCc
Q 048419          408 YVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLN-----AKLGDFGLA  482 (653)
Q Consensus       408 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~-----~kl~DfGla  482 (653)
                      |+ +++|.+++....    ..+++..++.++.||+.||+|||+   ++|+||||||+|||++.++.     +||+|||++
T Consensus        86 ~~-~~~L~~~~~~~~----~~~~~~~~~~i~~qi~~~l~~LH~---~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a  157 (330)
T 2izr_A           86 LL-GPSLEDLFDLCD----RTFSLKTVLMIAIQLISRMEYVHS---KNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALA  157 (330)
T ss_dssp             CC-CCBHHHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECCGGGTCTTSEEECCCTTC
T ss_pred             eC-CCCHHHHHHHcC----CCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeeeccCCCCCCceEEEEEcccc
Confidence            99 999999997642    458999999999999999999999   89999999999999998887     999999999


Q ss_pred             ccccCCCCC------cccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhc
Q 048419          483 KIYEHGANP------QTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHL  556 (653)
Q Consensus       483 ~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~  556 (653)
                      +........      ......||+.|+|||.+.+..++.++|||||||++|||++|+.||..............+.....
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~  237 (330)
T 2izr_A          158 KEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKR  237 (330)
T ss_dssp             EESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHH
T ss_pred             eeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhc
Confidence            876443221      12356799999999999999999999999999999999999999986543222111111111110


Q ss_pred             ccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          557 EGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       557 ~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                      ...... ..   ..    .+ .+.+++..||+.||.+||++.+|++.|+
T Consensus       238 ~~~~~~-~~---~~----~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~  277 (330)
T 2izr_A          238 ATPIEV-LC---EN----FP-EMATYLRYVRRLDFFEKPDYDYLRKLFT  277 (330)
T ss_dssp             HSCHHH-HT---TT----CH-HHHHHHHHHHHCCTTCCCCHHHHHHHHH
T ss_pred             cCCHHH-Hh---cc----Ch-HHHHHHHHHHhCCCCCCCCHHHHHHHHH
Confidence            000000 00   00    12 7899999999999999999999999885

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=100.00  E-value=2.3e-41  Score=359.63  Aligned_cols=276  Identities=22%  Similarity=0.299  Sum_probs=218.0

Q ss_pred             CcccCHHHHHHhhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcC-----CCceee
Q 048419          317 ARRFKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLR-----HRNLVQ  391 (653)
Q Consensus       317 ~~~f~~~el~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----H~niv~  391 (653)
                      ...+++.+.....++|...+.||+|+||.||+|.+..+++.||||++... ....+.+..|+.++++++     ||||++
T Consensus        22 ~~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv~  100 (360)
T 3llt_A           22 IVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIVK  100 (360)
T ss_dssp             GGSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBCC
T ss_pred             ceeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCeec
Confidence            45677888888889999999999999999999999888999999999643 344567788999999986     999999


Q ss_pred             eeeeecccceeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcC-
Q 048419          392 LHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDT-  470 (653)
Q Consensus       392 l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~-  470 (653)
                      +++++...+..++||||+ +++|.+++....   ...+++.+++.++.||+.||+|||+   ++|+||||||+|||++. 
T Consensus       101 ~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~---~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~  173 (360)
T 3llt_A          101 YHGKFMYYDHMCLIFEPL-GPSLYEIITRNN---YNGFHIEDIKLYCIEILKALNYLRK---MSLTHTDLKPENILLDDP  173 (360)
T ss_dssp             EEEEEEETTEEEEEECCC-CCBHHHHHHHTT---TCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCT
T ss_pred             ccceeeECCeeEEEEcCC-CCCHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCcccEEEccc
Confidence            999999999999999999 899999997654   2458899999999999999999999   99999999999999975 


Q ss_pred             ------------------------CCcEEEEeecCcccccCCCCCcccccccCCcccCccccccCCCCCccceeehHHHH
Q 048419          471 ------------------------YLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILM  526 (653)
Q Consensus       471 ------------------------~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl  526 (653)
                                              ++.+||+|||+++.....    .....||+.|+|||++.+..++.++|||||||++
T Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il  249 (360)
T 3llt_A          174 YFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY----HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVL  249 (360)
T ss_dssp             TCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSC----CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHH
T ss_pred             cccccccchhcccccccccccccCCCCEEEEeccCceecCCC----CcCccCcccccCcHHHcCCCCCCccchHHHHHHH
Confidence                                    789999999999864432    2345789999999999999999999999999999


Q ss_pred             HHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHh--------hhh----------------------ccCcCCHHHH
Q 048419          527 LEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQA--------IDQ----------------------TLDYYDLAEA  576 (653)
Q Consensus       527 ~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~--------~d~----------------------~l~~~~~~~~  576 (653)
                      |||++|+.||......+..................+.        ++.                      .+........
T Consensus       250 ~ell~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  329 (360)
T 3llt_A          250 AELYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKH  329 (360)
T ss_dssp             HHHHHSSCSCCCSSHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCC
T ss_pred             HHHHHCCCCCCCCcHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchH
Confidence            9999999999865543322211111100000000000        000                      0000000112


Q ss_pred             HHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          577 ELVLNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       577 ~~l~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                      +.+.+|+.+||+.||.+|||+.|++++-
T Consensus       330 ~~l~~li~~~L~~dP~~Rpta~elL~hp  357 (360)
T 3llt_A          330 ELFCDFLYSILQIDPTLRPSPAELLKHK  357 (360)
T ss_dssp             HHHHHHHHHHCCSSGGGSCCHHHHTTSG
T ss_pred             HHHHHHHHHHhcCChhhCCCHHHHhcCc
Confidence            5688999999999999999999998753

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=100.00  E-value=1.4e-41  Score=372.84  Aligned_cols=256  Identities=23%  Similarity=0.378  Sum_probs=209.3

Q ss_pred             hhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEe
Q 048419          328 VTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYD  407 (653)
Q Consensus       328 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E  407 (653)
                      ..++|...+.||+|+||.||+|.+.. +..||||++.... ...+.|.+|+.++++++||||+++++++. .+..++|||
T Consensus       186 ~~~~~~~~~~lG~G~fg~V~~~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e  262 (454)
T 1qcf_A          186 PRESLKLEKKLGAGQFGEVWMATYNK-HTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITE  262 (454)
T ss_dssp             CGGGEEEEEEEECCSSEEEEEEEETT-TEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEC
T ss_pred             chHHeEEEEEcccCCceEEEEEEECC-ccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEe
Confidence            34678889999999999999999864 7889999997543 34678999999999999999999999986 567899999


Q ss_pred             ccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccC
Q 048419          408 YVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEH  487 (653)
Q Consensus       408 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~  487 (653)
                      |+++|+|.+++....   ...+++..++.++.||+.||+|||+   ++|+||||||+|||++.++.+||+|||+++....
T Consensus       263 ~~~~g~L~~~l~~~~---~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~  336 (454)
T 1qcf_A          263 FMAKGSLLDFLKSDE---GSKQPLPKLIDFSAQIAEGMAFIEQ---RNYIHRDLRAANILVSASLVCKIADFGLARVIED  336 (454)
T ss_dssp             CCTTCBHHHHHHSHH---HHTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCC
T ss_pred             ecCCCcHHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCCHHHEEECCCCcEEEeeCCCceEcCC
Confidence            999999999997643   2357889999999999999999999   8999999999999999999999999999987643


Q ss_pred             CCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhh
Q 048419          488 GANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQ  566 (653)
Q Consensus       488 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  566 (653)
                      ..........++..|+|||.+....++.++|||||||++|||++ |+.||......+.   ...+.....          
T Consensus       337 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~---~~~i~~~~~----------  403 (454)
T 1qcf_A          337 NEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEV---IRALERGYR----------  403 (454)
T ss_dssp             HHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHH---HHHHHHTCC----------
T ss_pred             CceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHH---HHHHHcCCC----------
Confidence            21111223346788999999998899999999999999999999 9999976543321   111111110          


Q ss_pred             ccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcCC
Q 048419          567 TLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLGD  607 (653)
Q Consensus       567 ~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  607 (653)
                       + ..+......+.+|+.+||+.||.+|||+.+|++.|+.-
T Consensus       404 -~-~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~  442 (454)
T 1qcf_A          404 -M-PRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDF  442 (454)
T ss_dssp             -C-CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred             -C-CCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHH
Confidence             0 11122346788999999999999999999999999864

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=100.00  E-value=5.6e-42  Score=352.45  Aligned_cols=257  Identities=23%  Similarity=0.366  Sum_probs=215.3

Q ss_pred             hhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEe
Q 048419          328 VTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYD  407 (653)
Q Consensus       328 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E  407 (653)
                      ..++|...+.||+|+||.||+|.+..++..||||.+... ....+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus        11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e   89 (288)
T 3kfa_A           11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE   89 (288)
T ss_dssp             CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC-STHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred             cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEE
Confidence            456788899999999999999999988999999999654 3456789999999999999999999999999999999999


Q ss_pred             ccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccC
Q 048419          408 YVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEH  487 (653)
Q Consensus       408 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~  487 (653)
                      |+++++|.+++....   ...+++..++.++.|++.||.|||+   ++|+||||||+||+++.++.+||+|||++.....
T Consensus        90 ~~~~~~L~~~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~  163 (288)
T 3kfa_A           90 FMTYGNLLDYLRECN---RQEVSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG  163 (288)
T ss_dssp             CCTTEEHHHHHHHCC---TTTSCHHHHHHHHHHHHHHHHHHHH---HTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCS
T ss_pred             cCCCCcHHHHHHhcc---cCCccHhHHHHHHHHHHHHHHHHHH---CCccCCCCCcceEEEcCCCCEEEccCccceeccC
Confidence            999999999997654   3558999999999999999999999   8999999999999999999999999999987665


Q ss_pred             CCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhh
Q 048419          488 GANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQ  566 (653)
Q Consensus       488 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  566 (653)
                      ..........+++.|+|||.+.+..++.++||||||+++|||++ |+.||.......   ..+.+....           
T Consensus       164 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~---~~~~~~~~~-----------  229 (288)
T 3kfa_A          164 DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ---VYELLEKDY-----------  229 (288)
T ss_dssp             SSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG---HHHHHHTTC-----------
T ss_pred             CccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH---HHHHHhccC-----------
Confidence            44333444567889999999998899999999999999999999 999987644322   111111110           


Q ss_pred             ccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          567 TLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       567 ~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                       ....+......+.+++.+||+.||.+|||+.|+++.|+.
T Consensus       230 -~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~  268 (288)
T 3kfa_A          230 -RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFET  268 (288)
T ss_dssp             -CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             -CCCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHH
Confidence             011112234678899999999999999999999998864

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=100.00  E-value=2.1e-41  Score=355.16  Aligned_cols=269  Identities=23%  Similarity=0.304  Sum_probs=213.5

Q ss_pred             cCcCcceeeeeeCcEEEEEEE----eCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeec--ccceeE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGL----MPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR--KQDELL  403 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~----~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~--~~~~~~  403 (653)
                      ++|+..+.||+|+||.||+|.    ...+++.||||++........+.+.+|++++++++|+||+++++++.  +.+..+
T Consensus        23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~  102 (327)
T 3lxl_A           23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR  102 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEE
T ss_pred             hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEE
Confidence            568889999999999999998    45678999999998777777788999999999999999999999886  455689


Q ss_pred             EEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcc
Q 048419          404 LVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK  483 (653)
Q Consensus       404 lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~  483 (653)
                      +||||+++++|.+++....    ..+++.+++.++.|++.||+|||+   ++|+||||||+|||++.++.+||+|||+++
T Consensus       103 lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~  175 (327)
T 3lxl_A          103 LVMEYLPSGCLRDFLQRHR----ARLDASRLLLYSSQICKGMEYLGS---RRCVHRDLAARNILVESEAHVKIADFGLAK  175 (327)
T ss_dssp             EEEECCTTCBHHHHHHHHG----GGCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCGGGCE
T ss_pred             EEEeecCCCCHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCChhhEEECCCCCEEEcccccce
Confidence            9999999999999997642    348999999999999999999999   999999999999999999999999999998


Q ss_pred             cccCCCCC--cccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchh
Q 048419          484 IYEHGANP--QTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEIT  561 (653)
Q Consensus       484 ~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~  561 (653)
                      ........  ......||..|+|||.+.+..++.++|||||||++|||++|+.|+.......... ..+.........+.
T Consensus       176 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~  254 (327)
T 3lxl_A          176 LLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRM-MGCERDVPALSRLL  254 (327)
T ss_dssp             ECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHH-CC----CCHHHHHH
T ss_pred             ecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhh-cccccccccHHHHH
Confidence            76543221  1233457888999999998889999999999999999999999987544321100 00000000001111


Q ss_pred             Hhhhhcc-CcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          562 QAIDQTL-DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       562 ~~~d~~l-~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                      +.+.... ...+......+.+|+.+||+.||.+|||+.|++++|+.
T Consensus       255 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~  300 (327)
T 3lxl_A          255 ELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDM  300 (327)
T ss_dssp             HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHhhcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence            1222211 12233345778999999999999999999999999975

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=100.00  E-value=4.9e-41  Score=358.95  Aligned_cols=249  Identities=24%  Similarity=0.332  Sum_probs=202.1

Q ss_pred             ceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEeccCCCCc
Q 048419          335 QNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSL  414 (653)
Q Consensus       335 ~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL  414 (653)
                      .+.||+|+||.||+|....+|+.||+|++........+.+.+|++++++++||||+++++++.+.+..++||||+++++|
T Consensus        94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L  173 (373)
T 2x4f_A           94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGEL  173 (373)
T ss_dssp             EEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEE
T ss_pred             ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcH
Confidence            56899999999999999989999999999877666778899999999999999999999999999999999999999999


Q ss_pred             hhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEE--cCCCcEEEEeecCcccccCCCCCc
Q 048419          415 DKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILL--DTYLNAKLGDFGLAKIYEHGANPQ  492 (653)
Q Consensus       415 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll--~~~~~~kl~DfGla~~~~~~~~~~  492 (653)
                      .+++....    ..+++.+++.++.||++||.|||+   ++|+||||||+|||+  +.++.+||+|||+++......  .
T Consensus       174 ~~~l~~~~----~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~--~  244 (373)
T 2x4f_A          174 FDRIIDES----YNLTELDTILFMKQICEGIRHMHQ---MYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE--K  244 (373)
T ss_dssp             HHHHHHTG----GGCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTC--B
T ss_pred             HHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcc--c
Confidence            99886542    358899999999999999999999   899999999999999  677899999999998765432  2


Q ss_pred             ccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhccCcCC
Q 048419          493 TTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYYD  572 (653)
Q Consensus       493 ~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~  572 (653)
                      .....||+.|+|||++.+..++.++|||||||++|||++|+.||........  +.......+.   ..   .....   
T Consensus       245 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~--~~~i~~~~~~---~~---~~~~~---  313 (373)
T 2x4f_A          245 LKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAET--LNNILACRWD---LE---DEEFQ---  313 (373)
T ss_dssp             CCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHH--HHHHHHTCCC---SC---SGGGT---
T ss_pred             cccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHhccCC---CC---hhhhc---
Confidence            2334699999999999988999999999999999999999999986543321  1111111110   00   00001   


Q ss_pred             HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          573 LAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       573 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                       .....+.+++.+||+.||.+||++.|++++-
T Consensus       314 -~~~~~~~~li~~~L~~dp~~Rps~~e~l~hp  344 (373)
T 2x4f_A          314 -DISEEAKEFISKLLIKEKSWRISASEALKHP  344 (373)
T ss_dssp             -TSCHHHHHHHHTTSCSSGGGSCCHHHHHHSH
T ss_pred             -cCCHHHHHHHHHHcCCChhhCCCHHHHhcCc
Confidence             1235788999999999999999999999854

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=100.00  E-value=2.1e-41  Score=347.19  Aligned_cols=255  Identities=24%  Similarity=0.355  Sum_probs=196.4

Q ss_pred             hcCcCcceeeeeeCcEEEEEEEeCCC---CcEEEEEEeccC-chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEE
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGLMPSL---GLEVAIKRIGHN-SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLL  404 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~~~~~---~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  404 (653)
                      .++|...+.||+|+||.||+|.+..+   +..||+|++... .....+.+.+|+..+++++||||+++++++. .+..++
T Consensus        14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~l   92 (281)
T 1mp8_A           14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI   92 (281)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEE
T ss_pred             hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEE
Confidence            46788899999999999999998643   457999998654 3445678999999999999999999999984 456899


Q ss_pred             EEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccc
Q 048419          405 VYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKI  484 (653)
Q Consensus       405 V~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~  484 (653)
                      ||||+++++|.+++....    ..+++..++.++.|++.||.|||+   ++|+||||||+|||++.++.+||+|||+++.
T Consensus        93 v~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~  165 (281)
T 1mp8_A           93 IMELCTLGELRSFLQVRK----YSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRY  165 (281)
T ss_dssp             EEECCTTEEHHHHHHHTT----TTSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECC------
T ss_pred             EEecCCCCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHh---CCeecccccHHHEEECCCCCEEECccccccc
Confidence            999999999999997542    358999999999999999999999   8999999999999999999999999999987


Q ss_pred             ccCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhhcccchhHh
Q 048419          485 YEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELHLEGEITQA  563 (653)
Q Consensus       485 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~  563 (653)
                      .............+++.|+|||.+.+..++.++|||||||++|||++ |+.||........   ...+...    .    
T Consensus       166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~---~~~i~~~----~----  234 (281)
T 1mp8_A          166 MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV---IGRIENG----E----  234 (281)
T ss_dssp             -------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH---HHHHHTT----C----
T ss_pred             cCcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHH---HHHHHcC----C----
Confidence            65443333334457789999999998899999999999999999997 9999976543221   1111110    0    


Q ss_pred             hhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          564 IDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       564 ~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                          ....+......+.+++.+||+.||.+|||+.|+++.|+.
T Consensus       235 ----~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~  273 (281)
T 1mp8_A          235 ----RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLST  273 (281)
T ss_dssp             ----CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             ----CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence                001112234678899999999999999999999999864

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=100.00  E-value=1.2e-40  Score=356.45  Aligned_cols=251  Identities=25%  Similarity=0.360  Sum_probs=207.6

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC---chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN---SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVY  406 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  406 (653)
                      ++|...+.||+|+||.||++....+++.||+|++...   .....+.+.+|+.++++++||||+++++++.+.+.+++||
T Consensus        15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~   94 (384)
T 4fr4_A           15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV   94 (384)
T ss_dssp             GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence            5688899999999999999999999999999998643   2334678889999999999999999999999999999999


Q ss_pred             eccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccccc
Q 048419          407 DYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE  486 (653)
Q Consensus       407 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~  486 (653)
                      ||+++|+|..++...     ..+++..++.++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+++...
T Consensus        95 e~~~gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~  166 (384)
T 4fr4_A           95 DLLLGGDLRYHLQQN-----VHFKEETVKLFICELVMALDYLQN---QRIIHRDMKPDNILLDEHGHVHITDFNIAAMLP  166 (384)
T ss_dssp             CCCTTEEHHHHHHTT-----CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred             ecCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCcHHHeEECCCCCEEEeccceeeecc
Confidence            999999999999764     348999999999999999999999   899999999999999999999999999998764


Q ss_pred             CCCCCcccccccCCcccCcccccc---CCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHh
Q 048419          487 HGANPQTTHIVGTLGYLAPELTRT---GKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQA  563 (653)
Q Consensus       487 ~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~  563 (653)
                      ..  .......||+.|+|||++..   ..++.++|||||||++|||++|+.||..........+...+.           
T Consensus       167 ~~--~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~-----------  233 (384)
T 4fr4_A          167 RE--TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFE-----------  233 (384)
T ss_dssp             TT--CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHH-----------
T ss_pred             CC--CceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHh-----------
Confidence            33  23345689999999999864   358899999999999999999999997543322111111111           


Q ss_pred             hhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCC-HHHHHHH
Q 048419          564 IDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPD-MRRVVEF  603 (653)
Q Consensus       564 ~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs-~~evl~~  603 (653)
                        .....++......+.+|+.+||+.||.+||+ +.+|+++
T Consensus       234 --~~~~~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~h  272 (384)
T 4fr4_A          234 --TTVVTYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQNF  272 (384)
T ss_dssp             --HCCCCCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHTS
T ss_pred             --hcccCCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHcC
Confidence              1111122223467889999999999999998 7888763

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=100.00  E-value=6.5e-41  Score=359.40  Aligned_cols=261  Identities=23%  Similarity=0.336  Sum_probs=212.1

Q ss_pred             hcCcCcceeeeeeCcEEEEEEEeCC-------CCcEEEEEEeccC-chhhHHHHHHHHHHHhhc-CCCceeeeeeeeccc
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGLMPS-------LGLEVAIKRIGHN-SQQGMKEFVAEIMSMGRL-RHRNLVQLHGWCRKQ  399 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~~~~-------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~  399 (653)
                      .++|...+.||+|+||.||+|.+..       .+..||||++... .....+.+.+|+++++++ +||||++++++|.+.
T Consensus        68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~  147 (382)
T 3tt0_A           68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD  147 (382)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccC
Confidence            3678889999999999999998642       3467999999754 344567899999999999 999999999999999


Q ss_pred             ceeEEEEeccCCCCchhhhhccccc-----------ccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEE
Q 048419          400 DELLLVYDYVPNGSLDKLLFDKDHK-----------LRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILL  468 (653)
Q Consensus       400 ~~~~lV~E~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll  468 (653)
                      +..++||||+++|+|.+++......           ....+++.+++.++.||++||.|||+   ++|+||||||+|||+
T Consensus       148 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll  224 (382)
T 3tt0_A          148 GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVLV  224 (382)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEE
T ss_pred             CceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCcceEEE
Confidence            9999999999999999999765321           12458999999999999999999999   899999999999999


Q ss_pred             cCCCcEEEEeecCcccccCCCC-CcccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHH
Q 048419          469 DTYLNAKLGDFGLAKIYEHGAN-PQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELL  546 (653)
Q Consensus       469 ~~~~~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~  546 (653)
                      +.++.+||+|||+++....... .......+|+.|+|||++.+..++.++|||||||++|||++ |+.||.......   
T Consensus       225 ~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~---  301 (382)
T 3tt0_A          225 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE---  301 (382)
T ss_dssp             CTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH---
T ss_pred             cCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH---
Confidence            9999999999999987644322 22334467889999999999999999999999999999999 999997654321   


Q ss_pred             HHHHHHhhhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcCC
Q 048419          547 LVDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLGD  607 (653)
Q Consensus       547 l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  607 (653)
                      +.+.+.....            ...+......+.+++.+||+.||.+|||+.||+++|+..
T Consensus       302 ~~~~~~~~~~------------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~  350 (382)
T 3tt0_A          302 LFKLLKEGHR------------MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI  350 (382)
T ss_dssp             HHHHHHTTCC------------CCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHcCCC------------CCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            1111111100            011112346788999999999999999999999999753

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=100.00  E-value=7.2e-41  Score=346.24  Aligned_cols=259  Identities=25%  Similarity=0.351  Sum_probs=199.9

Q ss_pred             hhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhh--cCCCceeeeeeeecc----cce
Q 048419          328 VTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGR--LRHRNLVQLHGWCRK----QDE  401 (653)
Q Consensus       328 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~H~niv~l~g~~~~----~~~  401 (653)
                      ..++|...+.||+|+||.||+|.+  +++.||||++...   ..+.+..|.+++..  ++||||+++++++..    ...
T Consensus         6 ~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~   80 (301)
T 3q4u_A            6 VARDITLLECVGKGRYGEVWRGSW--QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQ   80 (301)
T ss_dssp             CGGGCEEEEEEEECSSEEEEEEEE--TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEE
T ss_pred             ccCcEEEEEeeccCCCcEEEEEEE--CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCce
Confidence            356889999999999999999998  4889999998543   33455666666666  799999999998654    346


Q ss_pred             eEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHH--------hcCCCCeEecCCCCCcEEEcCCCc
Q 048419          402 LLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLH--------EECNQRVVHRDVKPSNILLDTYLN  473 (653)
Q Consensus       402 ~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH--------~~~~~~ivH~Dlkp~NIll~~~~~  473 (653)
                      .++||||+++|+|.+++...      .+++..+++++.||+.||+|||        +   ++|+||||||+|||++.++.
T Consensus        81 ~~lv~e~~~~g~L~~~l~~~------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~---~~ivH~Dlkp~Nill~~~~~  151 (301)
T 3q4u_A           81 LWLITHYHEMGSLYDYLQLT------TLDTVSCLRIVLSIASGLAHLHIEIFGTQGK---PAIAHRDLKSKNILVKKNGQ  151 (301)
T ss_dssp             EEEEECCCTTCBHHHHHTTC------CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCB---CEEECSCCCGGGEEECTTSC
T ss_pred             eEEehhhccCCCHHHHHhhc------ccCHHHHHHHHHHHHHHHHHHHHhhhhccCC---CCeecCCCChHhEEEcCCCC
Confidence            89999999999999999543      4899999999999999999999        6   89999999999999999999


Q ss_pred             EEEEeecCcccccCCCCCc---ccccccCCcccCccccccC------CCCCccceeehHHHHHHHHhC----------CC
Q 048419          474 AKLGDFGLAKIYEHGANPQ---TTHIVGTLGYLAPELTRTG------KATTSTDVYSYGILMLEVACG----------RR  534 (653)
Q Consensus       474 ~kl~DfGla~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~------~~~~ksDV~s~Gvvl~elltG----------~~  534 (653)
                      +||+|||+++.........   .....||+.|+|||.+.+.      .++.++|||||||++|||++|          +.
T Consensus       152 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~  231 (301)
T 3q4u_A          152 CCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKP  231 (301)
T ss_dssp             EEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCC
T ss_pred             EEEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccc
Confidence            9999999998665433221   2234799999999999876      455799999999999999999          78


Q ss_pred             CCChhhhhhHHHHHHHHHhhhcccchhHhhhhcc--CcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          535 SIEPQKAAAELLLVDWVKELHLEGEITQAIDQTL--DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       535 p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l--~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                      ||......... .............     .+.+  ..........+.+|+.+||+.||.+|||+.||++.|+.
T Consensus       232 pf~~~~~~~~~-~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~  299 (301)
T 3q4u_A          232 PFYDVVPNDPS-FEDMRKVVCVDQQ-----RPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTK  299 (301)
T ss_dssp             TTTTTSCSSCC-HHHHHHHHTTSCC-----CCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHH
T ss_pred             cccccCCCCcc-hhhhhHHHhccCC-----CCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhc
Confidence            87643221110 0000000000000     0111  11223467889999999999999999999999999864

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=100.00  E-value=4.1e-41  Score=346.18  Aligned_cols=252  Identities=22%  Similarity=0.342  Sum_probs=206.2

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCC-------cEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeeccccee
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLG-------LEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDEL  402 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~-------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~  402 (653)
                      ++|...+.||+|+||.||+|.+..++       ..||+|++........+.+.+|+.++++++||||+++++++.+.+..
T Consensus         8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   87 (289)
T 4fvq_A            8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDEN   87 (289)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCC
T ss_pred             hHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCC
Confidence            56888999999999999999987665       47999999777777778899999999999999999999999999999


Q ss_pred             EEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCc--------E
Q 048419          403 LLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLN--------A  474 (653)
Q Consensus       403 ~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~--------~  474 (653)
                      ++||||+++++|.+++....    ..+++.+++.++.||++||.|||+   ++|+||||||+|||++.++.        +
T Consensus        88 ~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~~~~~  160 (289)
T 4fvq_A           88 ILVQEFVKFGSLDTYLKKNK----NCINILWKLEVAKQLAAAMHFLEE---NTLIHGNVCAKNILLIREEDRKTGNPPFI  160 (289)
T ss_dssp             EEEEECCTTCBHHHHHHHTG----GGCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEEECCBGGGTBCCEE
T ss_pred             EEEEECCCCCCHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHhh---CCeECCCcCcceEEEecCCccccccccee
Confidence            99999999999999997653    348899999999999999999999   89999999999999998887        9


Q ss_pred             EEEeecCcccccCCCCCcccccccCCcccCcccccc-CCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHh
Q 048419          475 KLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRT-GKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKE  553 (653)
Q Consensus       475 kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~  553 (653)
                      ||+|||++.....     .....||+.|+|||.+.+ ..++.++|||||||++|||++|+.|+........  .......
T Consensus       161 kl~Dfg~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~--~~~~~~~  233 (289)
T 4fvq_A          161 KLSDPGISITVLP-----KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQR--KLQFYED  233 (289)
T ss_dssp             EECCCCSCTTTSC-----HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH--HHHHHHT
T ss_pred             eeccCcccccccC-----ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHH--HHHHhhc
Confidence            9999999875422     233468899999999987 6789999999999999999996555443322111  1111110


Q ss_pred             hhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcCCCC
Q 048419          554 LHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLGDSS  609 (653)
Q Consensus       554 ~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  609 (653)
                         ...+.           ......+.+++.+||+.||.+|||+.|++++|+.-..
T Consensus       234 ---~~~~~-----------~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~  275 (289)
T 4fvq_A          234 ---RHQLP-----------APKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFT  275 (289)
T ss_dssp             ---TCCCC-----------CCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC-
T ss_pred             ---cCCCC-----------CCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence               00000           0113457899999999999999999999999987654

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=100.00  E-value=2.2e-41  Score=357.52  Aligned_cols=253  Identities=23%  Similarity=0.324  Sum_probs=208.1

Q ss_pred             HhhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc---hhhHHHHHHHHHHHhhc-CCCceeeeeeeeccccee
Q 048419          327 SVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS---QQGMKEFVAEIMSMGRL-RHRNLVQLHGWCRKQDEL  402 (653)
Q Consensus       327 ~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~  402 (653)
                      ...++|...+.||+|+||.||+|++..+++.||||++....   ....+.+..|..++.++ +||||+++++++.+.+.+
T Consensus        14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~   93 (345)
T 1xjd_A           14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENL   93 (345)
T ss_dssp             --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEE
T ss_pred             CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEE
Confidence            34578999999999999999999999999999999996532   33456788899999887 899999999999999999


Q ss_pred             EEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCc
Q 048419          403 LLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLA  482 (653)
Q Consensus       403 ~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla  482 (653)
                      ++||||+++|+|.+++...     ..+++.+++.++.||+.||+|||+   ++|+||||||+|||++.++.+||+|||++
T Consensus        94 ~lv~E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~vkL~DFG~a  165 (345)
T 1xjd_A           94 FFVMEYLNGGDLMYHIQSC-----HKFDLSRATFYAAEIILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMC  165 (345)
T ss_dssp             EEEEECCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTC
T ss_pred             EEEEeCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCChhhEEECCCCCEEEeEChhh
Confidence            9999999999999999753     348999999999999999999999   89999999999999999999999999999


Q ss_pred             ccccCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhH
Q 048419          483 KIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQ  562 (653)
Q Consensus       483 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~  562 (653)
                      +...... ......+||+.|+|||++.+..++.++|||||||++|||++|+.||.......   +...+...  .     
T Consensus       166 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~---~~~~i~~~--~-----  234 (345)
T 1xjd_A          166 KENMLGD-AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEE---LFHSIRMD--N-----  234 (345)
T ss_dssp             BCCCCTT-CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHHHHHHC--C-----
T ss_pred             hhcccCC-CcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHH---HHHHHHhC--C-----
Confidence            8643222 22345689999999999999899999999999999999999999998654322   11111110  0     


Q ss_pred             hhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHH-HHHHHH
Q 048419          563 AIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMR-RVVEFL  604 (653)
Q Consensus       563 ~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~-evl~~L  604 (653)
                         .   .++......+.+++.+||+.||.+||++. +++++-
T Consensus       235 ---~---~~p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~~hp  271 (345)
T 1xjd_A          235 ---P---FYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHP  271 (345)
T ss_dssp             ---C---CCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGGSG
T ss_pred             ---C---CCCcccCHHHHHHHHHHhcCCHhHcCCChHHHHcCc
Confidence               0   11111245688999999999999999998 777543

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=100.00  E-value=2.2e-41  Score=350.45  Aligned_cols=266  Identities=23%  Similarity=0.337  Sum_probs=207.2

Q ss_pred             cCcCcceeeeeeCcEEEEEEE----eCCCCcEEEEEEeccC-chhhHHHHHHHHHHHhhcCCCceeeeeeeeccc--cee
Q 048419          330 KGFGEQNLVGSGGFGRVYRGL----MPSLGLEVAIKRIGHN-SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQ--DEL  402 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~----~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~--~~~  402 (653)
                      +.|+..+.||+|+||.||+|.    ...+++.||||++... .....+.+.+|+.++++++||||+++++++...  +..
T Consensus        21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~  100 (302)
T 4e5w_A           21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI  100 (302)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred             hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence            457889999999999999998    4567899999999754 334567889999999999999999999999876  568


Q ss_pred             EEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCc
Q 048419          403 LLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLA  482 (653)
Q Consensus       403 ~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla  482 (653)
                      ++||||+++++|.+++....    ..+++.+++.++.|++.||+|||+   ++|+||||||+||+++.++.+||+|||++
T Consensus       101 ~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~  173 (302)
T 4e5w_A          101 KLIMEFLPSGSLKEYLPKNK----NKINLKQQLKYAVQICKGMDYLGS---RQYVHRDLAARNVLVESEHQVKIGDFGLT  173 (302)
T ss_dssp             EEEEECCTTCBHHHHHHHHT----TTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCCTTC
T ss_pred             EEEEEeCCCCcHHHHHHhcc----ccCCHHHHHHHHHHHHHHHHHhhc---CCcccCCCchheEEEcCCCCEEECccccc
Confidence            99999999999999996543    348999999999999999999999   99999999999999999999999999999


Q ss_pred             ccccCCCC--CcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhccc--
Q 048419          483 KIYEHGAN--PQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEG--  558 (653)
Q Consensus       483 ~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~--  558 (653)
                      ........  .......||..|+|||.+.+..++.++||||||+++|||++|+.|+.......    ...........  
T Consensus       174 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~----~~~~~~~~~~~~~  249 (302)
T 4e5w_A          174 KAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALF----LKMIGPTHGQMTV  249 (302)
T ss_dssp             EECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHH----HHHHCSCCGGGHH
T ss_pred             ccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHH----hhccCCcccccCH
Confidence            87654332  12233467888999999998899999999999999999999999865432210    00000000000  


Q ss_pred             -chhHhhhhcc-CcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          559 -EITQAIDQTL-DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       559 -~~~~~~d~~l-~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                       .+...+.... ...+......+.+|+.+||+.||.+|||+.|+++.|+.
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~  299 (302)
T 4e5w_A          250 TRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEA  299 (302)
T ss_dssp             HHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHHHHHhccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHH
Confidence             1111111111 11222345678999999999999999999999999863

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=100.00  E-value=7.3e-41  Score=353.76  Aligned_cols=257  Identities=22%  Similarity=0.301  Sum_probs=206.3

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC---chhhHHHHHHHHHHHhhc-CCCceeeeeeeecccceeEEE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN---SQQGMKEFVAEIMSMGRL-RHRNLVQLHGWCRKQDELLLV  405 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV  405 (653)
                      ++|...+.||+|+||.||+|++..+++.||||++...   .....+.+.+|..+++++ +||||+++++++.+.+.+++|
T Consensus         9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv   88 (345)
T 3a8x_A            9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV   88 (345)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred             hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence            4688899999999999999999999999999999754   334566788999999988 899999999999999999999


Q ss_pred             EeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccc
Q 048419          406 YDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIY  485 (653)
Q Consensus       406 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~  485 (653)
                      |||+++|+|.+++...     ..+++..++.++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+++..
T Consensus        89 ~e~~~gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~  160 (345)
T 3a8x_A           89 IEYVNGGDLMFHMQRQ-----RKLPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG  160 (345)
T ss_dssp             ECCCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCGGGCBCS
T ss_pred             EeCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEECCCCCEEEEeccccccc
Confidence            9999999999999653     348999999999999999999999   89999999999999999999999999999854


Q ss_pred             cCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHH--HHHHHHHhhhcccchhHh
Q 048419          486 EHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAEL--LLVDWVKELHLEGEITQA  563 (653)
Q Consensus       486 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~--~l~~~~~~~~~~~~~~~~  563 (653)
                      .... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.........  ...+.+.....       
T Consensus       161 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~-------  232 (345)
T 3a8x_A          161 LRPG-DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVIL-------  232 (345)
T ss_dssp             CCTT-CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHH-------
T ss_pred             cCCC-CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHH-------
Confidence            3221 2334568999999999999989999999999999999999999999643211100  00001111000       


Q ss_pred             hhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCH------HHHHHHH
Q 048419          564 IDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDM------RRVVEFL  604 (653)
Q Consensus       564 ~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~------~evl~~L  604 (653)
                       .... ..+......+.+++.+||+.||.+||++      .|++++-
T Consensus       233 -~~~~-~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~hp  277 (345)
T 3a8x_A          233 -EKQI-RIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHP  277 (345)
T ss_dssp             -HCCC-CCCTTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTSG
T ss_pred             -cCCC-CCCCCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcCC
Confidence             0001 1112234678899999999999999995      6777654

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=100.00  E-value=6e-41  Score=349.03  Aligned_cols=260  Identities=25%  Similarity=0.342  Sum_probs=211.3

Q ss_pred             hcCcCcceeeeeeCcEEEEEEEe-----CCCCcEEEEEEeccC-chhhHHHHHHHHHHHhhcCCCceeeeeeeeccccee
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGLM-----PSLGLEVAIKRIGHN-SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDEL  402 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~~-----~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~  402 (653)
                      .++|...+.||+|+||.||+|.+     ..++..||||++... .....+.+.+|++++++++||||+++++++.+.+..
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~  101 (314)
T 2ivs_A           22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPL  101 (314)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred             hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCce
Confidence            46788899999999999999987     344689999999754 345567899999999999999999999999999999


Q ss_pred             EEEEeccCCCCchhhhhccccc-------------------ccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCC
Q 048419          403 LLVYDYVPNGSLDKLLFDKDHK-------------------LRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKP  463 (653)
Q Consensus       403 ~lV~E~~~~gsL~~~l~~~~~~-------------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp  463 (653)
                      ++||||+++++|.+++......                   ....+++.+++.++.||++||.|||+   ++|+||||||
T Consensus       102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dikp  178 (314)
T 2ivs_A          102 LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAE---MKLVHRDLAA  178 (314)
T ss_dssp             EEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHH---TTEECCCCSG
T ss_pred             EEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHH---CCCcccccch
Confidence            9999999999999999765320                   12358999999999999999999999   8999999999


Q ss_pred             CcEEEcCCCcEEEEeecCcccccCCCCC-cccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhh
Q 048419          464 SNILLDTYLNAKLGDFGLAKIYEHGANP-QTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKA  541 (653)
Q Consensus       464 ~NIll~~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~  541 (653)
                      +||+++.++.+||+|||+++........ ......+++.|+|||.+.+..++.++|||||||++|||++ |+.||.....
T Consensus       179 ~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~  258 (314)
T 2ivs_A          179 RNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP  258 (314)
T ss_dssp             GGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCG
T ss_pred             heEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCH
Confidence            9999999999999999999876443221 1223457788999999998889999999999999999999 9999976543


Q ss_pred             hhHHHHHHHHHhhhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          542 AAELLLVDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       542 ~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                      ..   +...+....            ....+......+.+++.+||+.||.+||++.|++++|+.
T Consensus       259 ~~---~~~~~~~~~------------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~  308 (314)
T 2ivs_A          259 ER---LFNLLKTGH------------RMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEK  308 (314)
T ss_dssp             GG---HHHHHHTTC------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HH---HHHHhhcCC------------cCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence            22   111111110            011112234678899999999999999999999999864

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=100.00  E-value=9.7e-41  Score=341.31  Aligned_cols=254  Identities=22%  Similarity=0.299  Sum_probs=209.9

Q ss_pred             hhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEe
Q 048419          328 VTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYD  407 (653)
Q Consensus       328 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E  407 (653)
                      ..++|...+.||+|+||.||+|.+..++..+|+|++........+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   86 (277)
T 3f3z_A            7 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVME   86 (277)
T ss_dssp             HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             hhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEe
Confidence            45678999999999999999999999999999999977666667889999999999999999999999999999999999


Q ss_pred             ccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEE---cCCCcEEEEeecCccc
Q 048419          408 YVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILL---DTYLNAKLGDFGLAKI  484 (653)
Q Consensus       408 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~DfGla~~  484 (653)
                      |+++++|.+++...     ..+++.+++.++.|++.||.|||+   ++|+||||||+||++   +.++.+||+|||++..
T Consensus        87 ~~~~~~L~~~~~~~-----~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~  158 (277)
T 3f3z_A           87 LCTGGELFERVVHK-----RVFRESDAARIMKDVLSAVAYCHK---LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAAR  158 (277)
T ss_dssp             CCCSCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSTTCCEEECCCTTCEE
T ss_pred             ccCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCCHHHEEEecCCCCCcEEEEeccccee
Confidence            99999999988653     348999999999999999999999   899999999999999   8889999999999987


Q ss_pred             ccCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhh
Q 048419          485 YEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAI  564 (653)
Q Consensus       485 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  564 (653)
                      .....  ......||+.|+|||.+.+ .++.++||||||+++|||++|+.||.........   ..+....  .......
T Consensus       159 ~~~~~--~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~---~~~~~~~--~~~~~~~  230 (277)
T 3f3z_A          159 FKPGK--MMRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVM---LKIREGT--FTFPEKD  230 (277)
T ss_dssp             CCTTS--CBCCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHH---HHHHHCC--CCCCHHH
T ss_pred             ccCcc--chhccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCCHHHHH---HHHHhCC--CCCCchh
Confidence            65432  2334578999999999865 4899999999999999999999999865432211   1111100  0000000


Q ss_pred             hhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          565 DQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       565 d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                      .   .    .....+.+++.+||+.||.+||++.|++++-
T Consensus       231 ~---~----~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~  263 (277)
T 3f3z_A          231 W---L----NVSPQAESLIRRLLTKSPKQRITSLQALEHE  263 (277)
T ss_dssp             H---T----TSCHHHHHHHHHHTCSSTTTSCCHHHHTTSH
T ss_pred             h---h----cCCHHHHHHHHHHccCChhhCcCHHHHhcCH
Confidence            0   0    1236788999999999999999999999754

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=100.00  E-value=9.8e-41  Score=347.78  Aligned_cols=269  Identities=25%  Similarity=0.302  Sum_probs=205.5

Q ss_pred             hhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc--hhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEE
Q 048419          328 VTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS--QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLV  405 (653)
Q Consensus       328 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV  405 (653)
                      ..++|+..+.||+|+||.||+|.+.. ++.||||++....  ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus        19 l~~~y~~~~~lG~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv   97 (311)
T 3niz_A           19 LMEKYQKLEKVGEGTYGVVYKAKDSQ-GRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLV   97 (311)
T ss_dssp             SSCEEEEEEEEEECSSCEEEEEEETT-SCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEE
T ss_pred             hHhhhHhhhhccCCCCeEEEEEEECC-CCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEE
Confidence            44778999999999999999999864 8999999996542  23356788999999999999999999999999999999


Q ss_pred             EeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccc
Q 048419          406 YDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIY  485 (653)
Q Consensus       406 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~  485 (653)
                      |||+++ +|.+++....    ..+++.+++.++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+++..
T Consensus        98 ~e~~~~-~l~~~~~~~~----~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~  169 (311)
T 3niz_A           98 FEFMEK-DLKKVLDENK----TGLQDSQIKIYLYQLLRGVAHCHQ---HRILHRDLKPQNLLINSDGALKLADFGLARAF  169 (311)
T ss_dssp             EECCSE-EHHHHHHTCT----TCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEET
T ss_pred             EcCCCC-CHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCchHhEEECCCCCEEEccCcCceec
Confidence            999975 8888876543    458999999999999999999999   89999999999999999999999999999876


Q ss_pred             cCCCCCcccccccCCcccCcccccc-CCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhH--
Q 048419          486 EHGANPQTTHIVGTLGYLAPELTRT-GKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQ--  562 (653)
Q Consensus       486 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~--  562 (653)
                      .... .......||+.|+|||.+.+ ..++.++|||||||++|||++|+.||......+...................  
T Consensus       170 ~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  248 (311)
T 3niz_A          170 GIPV-RSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQ  248 (311)
T ss_dssp             TSCC-C---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGT
T ss_pred             CCCc-ccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhh
Confidence            4332 22334578999999999876 5689999999999999999999999976554332211110000000000000  


Q ss_pred             ----hhhhcc---CcCCH-----HHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          563 ----AIDQTL---DYYDL-----AEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       563 ----~~d~~l---~~~~~-----~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                          ..+...   .....     .....+.+|+.+||+.||.+|||+.|++++-..
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f  304 (311)
T 3niz_A          249 ELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYF  304 (311)
T ss_dssp             TSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGG
T ss_pred             ccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcCccc
Confidence                000000   00111     123578899999999999999999999986543

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=100.00  E-value=7.4e-41  Score=349.13  Aligned_cols=264  Identities=24%  Similarity=0.238  Sum_probs=209.7

Q ss_pred             hcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeec----ccceeEE
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR----KQDELLL  404 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~----~~~~~~l  404 (653)
                      .++|...+.||+|+||.||++....+++.||||++........+.+.+|++++++++||||+++++++.    .....++
T Consensus        28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l  107 (317)
T 2buj_A           28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWL  107 (317)
T ss_dssp             TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEE
T ss_pred             CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEE
Confidence            467889999999999999999998889999999997777777788999999999999999999999986    3457899


Q ss_pred             EEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccc
Q 048419          405 VYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKI  484 (653)
Q Consensus       405 V~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~  484 (653)
                      ||||+++|+|.+++...... ...+++.+++.++.||++||.|||+   ++|+||||||+|||++.++.+||+|||++..
T Consensus       108 v~e~~~~~~L~~~l~~~~~~-~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~  183 (317)
T 2buj_A          108 LLPFFKRGTLWNEIERLKDK-GNFLTEDQILWLLLGICRGLEAIHA---KGYAHRDLKPTNILLGDEGQPVLMDLGSMNQ  183 (317)
T ss_dssp             EEECCTTCBHHHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCSSCEE
T ss_pred             EEEeCCCCcHHHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEcCCCCEEEEecCcchh
Confidence            99999999999999764221 3568999999999999999999999   8999999999999999999999999999876


Q ss_pred             ccCCCCC--------cccccccCCcccCccccccCC---CCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHh
Q 048419          485 YEHGANP--------QTTHIVGTLGYLAPELTRTGK---ATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKE  553 (653)
Q Consensus       485 ~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~---~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~  553 (653)
                      .......        ......||+.|+|||.+....   ++.++|||||||++|||++|+.||......... +..... 
T Consensus       184 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~-~~~~~~-  261 (317)
T 2buj_A          184 ACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDS-VALAVQ-  261 (317)
T ss_dssp             SCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSC-HHHHHH-
T ss_pred             cccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccch-hhHHhh-
Confidence            4321111        112345799999999987543   688999999999999999999999653221111 000000 


Q ss_pred             hhcccchhHhhhhcc-CcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcCCCCC
Q 048419          554 LHLEGEITQAIDQTL-DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLGDSSL  610 (653)
Q Consensus       554 ~~~~~~~~~~~d~~l-~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~  610 (653)
                                  ... ..........+.+++.+||+.||.+||++.+++++|+...+.
T Consensus       262 ------------~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~  307 (317)
T 2buj_A          262 ------------NQLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPP  307 (317)
T ss_dssp             ------------CC--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCC
T ss_pred             ------------ccCCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCC
Confidence                        000 001112245788999999999999999999999999875543

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=100.00  E-value=5.2e-41  Score=351.38  Aligned_cols=263  Identities=21%  Similarity=0.301  Sum_probs=195.4

Q ss_pred             HHhhcCcCcceeeeeeCcEEEEEEEeCCCCc---EEEEEEeccC--chhhHHHHHHHHHHHhhcCCCceeeeeeeecccc
Q 048419          326 ASVTKGFGEQNLVGSGGFGRVYRGLMPSLGL---EVAIKRIGHN--SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQD  400 (653)
Q Consensus       326 ~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~---~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~  400 (653)
                      ....++|...+.||+|+||.||+|.+..++.   .||||++...  .....+.+.+|++++++++||||+++++++...+
T Consensus        19 ~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~   98 (323)
T 3qup_A           19 LIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSR   98 (323)
T ss_dssp             BCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-
T ss_pred             ccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccc
Confidence            3445689999999999999999999876654   8999998654  4455778999999999999999999999998776


Q ss_pred             ee------EEEEeccCCCCchhhhhcccccc-cccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCc
Q 048419          401 EL------LLVYDYVPNGSLDKLLFDKDHKL-RKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLN  473 (653)
Q Consensus       401 ~~------~lV~E~~~~gsL~~~l~~~~~~~-~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~  473 (653)
                      ..      ++||||+++|+|.+++....... ...+++.+++.++.||++||.|||+   ++|+||||||+|||++.++.
T Consensus        99 ~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~---~~ivH~Dikp~NIli~~~~~  175 (323)
T 3qup_A           99 AKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSS---RNFIHRDLAARNCMLAEDMT  175 (323)
T ss_dssp             ------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTSC
T ss_pred             cccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHc---CCcccCCCCcceEEEcCCCC
Confidence            54      99999999999999997643211 2258999999999999999999999   89999999999999999999


Q ss_pred             EEEEeecCcccccCCCC-CcccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHH
Q 048419          474 AKLGDFGLAKIYEHGAN-PQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWV  551 (653)
Q Consensus       474 ~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~  551 (653)
                      +||+|||+++....... .......+++.|+|||.+.+..++.++|||||||++|||++ |+.||........   ...+
T Consensus       176 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~---~~~~  252 (323)
T 3qup_A          176 VCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEI---YNYL  252 (323)
T ss_dssp             EEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH---HHHH
T ss_pred             EEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHH---HHHH
Confidence            99999999986644322 22233456789999999999999999999999999999999 8999976543221   1111


Q ss_pred             HhhhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          552 KELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       552 ~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                      ..            .............+.+++.+||+.||.+|||+.++++.|+.
T Consensus       253 ~~------------~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~  295 (323)
T 3qup_A          253 IG------------GNRLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELEN  295 (323)
T ss_dssp             HT------------TCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred             hc------------CCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence            11            00011112234678899999999999999999999998875

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=100.00  E-value=5.4e-41  Score=341.95  Aligned_cols=249  Identities=29%  Similarity=0.478  Sum_probs=194.7

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc----hhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS----QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLV  405 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV  405 (653)
                      ++|+..+.||+|+||.||+|.+.  +..||||++....    ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus         7 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   84 (271)
T 3dtc_A            7 AELTLEEIIGIGGFGKVYRAFWI--GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV   84 (271)
T ss_dssp             TSEEEEEEEEEETTEEEEEEEET--TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred             hheeeeeeeccCCCeEEEEEEEc--CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence            57888999999999999999985  7899999986542    23356789999999999999999999999999999999


Q ss_pred             EeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCC---eEecCCCCCcEEEcC--------CCcE
Q 048419          406 YDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQR---VVHRDVKPSNILLDT--------YLNA  474 (653)
Q Consensus       406 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~---ivH~Dlkp~NIll~~--------~~~~  474 (653)
                      |||+++++|.+++...      .+++.+++.++.|+++||.|||+   ++   |+||||||+|||++.        ++.+
T Consensus        85 ~e~~~~~~L~~~~~~~------~~~~~~~~~i~~~l~~~l~~lH~---~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~  155 (271)
T 3dtc_A           85 MEFARGGPLNRVLSGK------RIPPDILVNWAVQIARGMNYLHD---EAIVPIIHRDLKSSNILILQKVENGDLSNKIL  155 (271)
T ss_dssp             EECCTTEEHHHHHTSS------CCCHHHHHHHHHHHHHHHHHHHH---SSSSCCCCSCCSGGGEEESSCCSSSCCSSCCE
T ss_pred             EEcCCCCCHHHHhhcC------CCCHHHHHHHHHHHHHHHHHHHh---CCCCceeecCCchHHEEEecccccccccCcce
Confidence            9999999999998543      48899999999999999999999   66   999999999999986        7789


Q ss_pred             EEEeecCcccccCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhh
Q 048419          475 KLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKEL  554 (653)
Q Consensus       475 kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~  554 (653)
                      ||+|||+++......   .....||+.|+|||.+.+..++.++||||||+++|||++|+.||..........   .+...
T Consensus       156 kl~Dfg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~---~~~~~  229 (271)
T 3dtc_A          156 KITDFGLAREWHRTT---KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAY---GVAMN  229 (271)
T ss_dssp             EECCCCC----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHH---HHHTS
T ss_pred             EEccCCccccccccc---ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH---hhhcC
Confidence            999999998654322   223478999999999998899999999999999999999999998654322110   00000


Q ss_pred             hcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          555 HLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       555 ~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                          ..       ....+......+.+++.+||+.||.+|||+.|++++|+.
T Consensus       230 ----~~-------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~  270 (271)
T 3dtc_A          230 ----KL-------ALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTT  270 (271)
T ss_dssp             ----CC-------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC
T ss_pred             ----CC-------CCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhc
Confidence                00       011112234678899999999999999999999999964

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=100.00  E-value=1.9e-41  Score=346.78  Aligned_cols=264  Identities=23%  Similarity=0.340  Sum_probs=212.3

Q ss_pred             hcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC--chhhHHHHHHHHHHHhhcCCCceeeeeeeec--ccceeEE
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR--KQDELLL  404 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~--~~~~~~l  404 (653)
                      .++|+..+.||+|+||.||++....+++.||+|++...  .....+.+.+|+.++++++||||+++++++.  ..+..++
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   84 (279)
T 2w5a_A            5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI   84 (279)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred             hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence            36788899999999999999999989999999999654  3445678999999999999999999999874  4568999


Q ss_pred             EEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCC-----eEecCCCCCcEEEcCCCcEEEEee
Q 048419          405 VYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQR-----VVHRDVKPSNILLDTYLNAKLGDF  479 (653)
Q Consensus       405 V~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~-----ivH~Dlkp~NIll~~~~~~kl~Df  479 (653)
                      ||||+++++|.+++..... ....+++.+++.++.|++.||.|||+   ++     |+||||||+||+++.++.+||+||
T Consensus        85 v~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~---~~~~~~~ivH~dl~p~NIl~~~~~~~kl~df  160 (279)
T 2w5a_A           85 VMEYCEGGDLASVITKGTK-ERQYLDEEFVLRVMTQLTLALKECHR---RSDGGHTVLHRDLKPANVFLDGKQNVKLGDF  160 (279)
T ss_dssp             EEECCTTEEHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHH---HC------CCCCCSGGGEEECSSSCEEECCC
T ss_pred             EEeCCCCCCHHHHHHhhcc-cCCCCCHHHHHHHHHHHHHHHHHHhc---ccCCCCeeEEeccchhhEEEcCCCCEEEecC
Confidence            9999999999999976432 13458999999999999999999999   67     999999999999999999999999


Q ss_pred             cCcccccCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccc
Q 048419          480 GLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGE  559 (653)
Q Consensus       480 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~  559 (653)
                      |+++...... .......|++.|+|||.+.+..++.++||||||+++|||++|+.||.......   +...+..    +.
T Consensus       161 g~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~---~~~~i~~----~~  232 (279)
T 2w5a_A          161 GLARILNHDT-SFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKE---LAGKIRE----GK  232 (279)
T ss_dssp             CHHHHC---C-HHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHHHHHH----TC
T ss_pred             chheeecccc-ccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHH---HHHHHhh----cc
Confidence            9998754322 12233568999999999998889999999999999999999999998654321   1111111    11


Q ss_pred             hhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcCCCCCCC
Q 048419          560 ITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLGDSSLPP  612 (653)
Q Consensus       560 ~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~p~  612 (653)
                      .        ...+......+.+++.+||+.||.+||++.||++++....+.++
T Consensus       233 ~--------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~~~~~  277 (279)
T 2w5a_A          233 F--------RRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLILEHHHH  277 (279)
T ss_dssp             C--------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCGGGSC
T ss_pred             c--------ccCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhhhhhccc
Confidence            0        11111234678899999999999999999999999887665544

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=100.00  E-value=5.1e-41  Score=355.71  Aligned_cols=256  Identities=25%  Similarity=0.317  Sum_probs=194.7

Q ss_pred             hhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEe
Q 048419          328 VTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYD  407 (653)
Q Consensus       328 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E  407 (653)
                      +.++|...+.||+|+||.||+|.+..+++.||||++....  ..+.+.+|+.++++++||||++++++|.+.+..++|||
T Consensus        51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  128 (349)
T 2w4o_A           51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLE  128 (349)
T ss_dssp             GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEE
Confidence            4678999999999999999999999889999999996543  34568899999999999999999999999999999999


Q ss_pred             ccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcC---CCcEEEEeecCccc
Q 048419          408 YVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDT---YLNAKLGDFGLAKI  484 (653)
Q Consensus       408 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~DfGla~~  484 (653)
                      |+++++|.+++...     ..+++.+++.++.||+.||.|||+   ++|+||||||+|||++.   ++.+||+|||+++.
T Consensus       129 ~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~  200 (349)
T 2w4o_A          129 LVTGGELFDRIVEK-----GYYSERDAADAVKQILEAVAYLHE---NGIVHRDLKPENLLYATPAPDAPLKIADFGLSKI  200 (349)
T ss_dssp             CCCSCBHHHHHTTC-----SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEESSSSTTCCEEECCCC----
T ss_pred             eCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCcccEEEecCCCCCCEEEccCccccc
Confidence            99999999998754     348999999999999999999999   89999999999999975   88999999999986


Q ss_pred             ccCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhh
Q 048419          485 YEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAI  564 (653)
Q Consensus       485 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  564 (653)
                      .....  ......||+.|+|||++.+..++.++|||||||++|||++|+.||........  +...+..    ... ...
T Consensus       201 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~--~~~~i~~----~~~-~~~  271 (349)
T 2w4o_A          201 VEHQV--LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQF--MFRRILN----CEY-YFI  271 (349)
T ss_dssp             --------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHH--HHHHHHT----TCC-CCC
T ss_pred             cCccc--ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHH--HHHHHHh----CCC-ccC
Confidence            54322  22345789999999999998999999999999999999999999975443211  1111111    000 000


Q ss_pred             hhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          565 DQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       565 d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                          ..........+.+|+.+||+.||.+|||+.|++++-.-
T Consensus       272 ----~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~  309 (349)
T 2w4o_A          272 ----SPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPWV  309 (349)
T ss_dssp             ----TTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTT
T ss_pred             ----CchhhhCCHHHHHHHHHHccCChhhCcCHHHHhcCccc
Confidence                00111234568899999999999999999999986543

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=100.00  E-value=1.1e-40  Score=353.13  Aligned_cols=251  Identities=22%  Similarity=0.307  Sum_probs=207.8

Q ss_pred             hcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC---chhhHHHHHHHHHHHhhc-CCCceeeeeeeecccceeEE
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN---SQQGMKEFVAEIMSMGRL-RHRNLVQLHGWCRKQDELLL  404 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~l  404 (653)
                      -++|...+.||+|+||.||+|....+++.||||++...   .....+.+..|..++..+ +||||+++++++.+.+.+++
T Consensus        19 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l   98 (353)
T 2i0e_A           19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF   98 (353)
T ss_dssp             CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEE
T ss_pred             hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEE
Confidence            36789999999999999999999988999999999654   233456788999999988 79999999999999999999


Q ss_pred             EEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccc
Q 048419          405 VYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKI  484 (653)
Q Consensus       405 V~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~  484 (653)
                      ||||+++|+|.+++...     ..+++.+++.++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+++.
T Consensus        99 v~E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~vkL~DFG~a~~  170 (353)
T 2i0e_A           99 VMEYVNGGDLMYHIQQV-----GRFKEPHAVFYAAEIAIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKE  170 (353)
T ss_dssp             EEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred             EEeCCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCEEeccCCHHHEEEcCCCcEEEEeCCcccc
Confidence            99999999999999754     348999999999999999999999   8999999999999999999999999999986


Q ss_pred             ccCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhh
Q 048419          485 YEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAI  564 (653)
Q Consensus       485 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  564 (653)
                      ..... ......+||+.|+|||++.+..++.++|||||||++|||++|+.||.......   +.+.+..           
T Consensus       171 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~---~~~~i~~-----------  235 (353)
T 2i0e_A          171 NIWDG-VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE---LFQSIME-----------  235 (353)
T ss_dssp             CCCTT-CCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHHHHHH-----------
T ss_pred             cccCC-cccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHH---HHHHHHh-----------
Confidence            43221 23345679999999999999999999999999999999999999998654321   1111111           


Q ss_pred             hhccCcCCHHHHHHHHHHHHHcCCCCCCCCCC-----HHHHHHHH
Q 048419          565 DQTLDYYDLAEAELVLNLGLFCSAPNPVYRPD-----MRRVVEFL  604 (653)
Q Consensus       565 d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs-----~~evl~~L  604 (653)
                       ..+ .++......+.+|+.+||+.||.+||+     +.+++++-
T Consensus       236 -~~~-~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h~  278 (353)
T 2i0e_A          236 -HNV-AYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHA  278 (353)
T ss_dssp             -CCC-CCCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTSG
T ss_pred             -CCC-CCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCc
Confidence             000 111123467889999999999999995     68888654

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=100.00  E-value=1.2e-40  Score=358.13  Aligned_cols=268  Identities=21%  Similarity=0.237  Sum_probs=207.9

Q ss_pred             hcCcCcceeeeee--CcEEEEEEEeCCCCcEEEEEEeccC--chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEE
Q 048419          329 TKGFGEQNLVGSG--GFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLL  404 (653)
Q Consensus       329 t~~f~~~~~LG~G--~fg~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  404 (653)
                      .++|+..+.||+|  +||.||+|.+..+++.||||++...  ..+..+.+.+|+.++++++||||+++++++.+.+..++
T Consensus        24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l  103 (389)
T 3gni_B           24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV  103 (389)
T ss_dssp             GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred             CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence            3678899999999  9999999999989999999999654  34456778899999999999999999999999999999


Q ss_pred             EEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccc
Q 048419          405 VYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKI  484 (653)
Q Consensus       405 V~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~  484 (653)
                      |||||++|+|.+++....   ...+++..++.++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||++..
T Consensus       104 v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~  177 (389)
T 3gni_B          104 VTSFMAYGSAKDLICTHF---MDGMNELAIAYILQGVLKALDYIHH---MGYVHRSVKASHILISVDGKVYLSGLRSNLS  177 (389)
T ss_dssp             EEECCTTCBHHHHHHHTC---TTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCGGGCEE
T ss_pred             EEEccCCCCHHHHHhhhc---ccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEccccccee
Confidence            999999999999997653   2458999999999999999999999   8999999999999999999999999999865


Q ss_pred             ccCCC------CCcccccccCCcccCcccccc--CCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhc
Q 048419          485 YEHGA------NPQTTHIVGTLGYLAPELTRT--GKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHL  556 (653)
Q Consensus       485 ~~~~~------~~~~~~~~gt~~y~aPE~~~~--~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~  556 (653)
                      .....      ........||+.|+|||++.+  ..++.++|||||||++|||++|+.||..........  ........
T Consensus       178 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~--~~~~~~~~  255 (389)
T 3gni_B          178 MISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLL--EKLNGTVP  255 (389)
T ss_dssp             CEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHH--HC------
T ss_pred             eccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHH--HHhcCCCC
Confidence            42211      111223478999999999987  578999999999999999999999997644322110  00000000


Q ss_pred             ---------cc-------------chhHhhh---hc-------cCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          557 ---------EG-------------EITQAID---QT-------LDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       557 ---------~~-------------~~~~~~d---~~-------l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                               ..             .+.+.+.   +.       ...........+.+|+.+||+.||.+|||+.|++++-
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp  335 (389)
T 3gni_B          256 CLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHS  335 (389)
T ss_dssp             --------------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSG
T ss_pred             ccccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCH
Confidence                     00             0000000   00       0001112246689999999999999999999999864

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=100.00  E-value=8e-41  Score=348.31  Aligned_cols=255  Identities=23%  Similarity=0.322  Sum_probs=198.7

Q ss_pred             hcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC---chhhHHHHHHHHHHHhhcCCCceeeeeeeecccce----
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN---SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDE----  401 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~----  401 (653)
                      .++|...+.||+|+||.||+|.+..+++.||||++...   .....+.+.+|+.++++++||||+++++++.....    
T Consensus        11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~   90 (311)
T 3ork_A           11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL   90 (311)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred             cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence            46899999999999999999999888999999999754   33445678999999999999999999999876653    


Q ss_pred             eEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecC
Q 048419          402 LLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGL  481 (653)
Q Consensus       402 ~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl  481 (653)
                      .++||||+++++|.+++...     ..+++.+++.++.||+.||+|||+   ++|+||||||+|||++.++.+||+|||+
T Consensus        91 ~~lv~e~~~g~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~  162 (311)
T 3ork_A           91 PYIVMEYVDGVTLRDIVHTE-----GPMTPKRAIEVIADACQALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDFGI  162 (311)
T ss_dssp             EEEEEECCCEEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEETTSCEEECCCSC
T ss_pred             cEEEEecCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCCCcCCCCHHHEEEcCCCCEEEeeccC
Confidence            49999999999999999754     348999999999999999999999   8999999999999999999999999999


Q ss_pred             cccccCCCC--CcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccc
Q 048419          482 AKIYEHGAN--PQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGE  559 (653)
Q Consensus       482 a~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~  559 (653)
                      ++.......  .......||+.|+|||.+.+..++.++|||||||++|||++|+.||........  .......   ...
T Consensus       163 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~--~~~~~~~---~~~  237 (311)
T 3ork_A          163 ARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSV--AYQHVRE---DPI  237 (311)
T ss_dssp             C------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH--HHHHHHC---CCC
T ss_pred             cccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHH--HHHHhcC---CCC
Confidence            987644322  222345689999999999999999999999999999999999999986544221  1111111   000


Q ss_pred             hhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 048419          560 ITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEF  603 (653)
Q Consensus       560 ~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  603 (653)
                      ......       ......+.+++.+||+.||.+||+..++++.
T Consensus       238 ~~~~~~-------~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~  274 (311)
T 3ork_A          238 PPSARH-------EGLSADLDAVVLKALAKNPENRYQTAAEMRA  274 (311)
T ss_dssp             CHHHHS-------TTCCHHHHHHHHHHTCSSGGGSCSSHHHHHH
T ss_pred             Cccccc-------CCCCHHHHHHHHHHHhcCHhhChhhHHHHHH
Confidence            000000       0123568899999999999999987776653

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=100.00  E-value=1.8e-40  Score=345.29  Aligned_cols=266  Identities=23%  Similarity=0.276  Sum_probs=204.5

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc--hhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEe
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS--QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYD  407 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E  407 (653)
                      ++|...+.||+|+||.||+|.+..+++.||||++....  ....+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   82 (311)
T 4agu_A            3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE   82 (311)
T ss_dssp             CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence            57889999999999999999999889999999986543  3345678899999999999999999999999999999999


Q ss_pred             ccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccC
Q 048419          408 YVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEH  487 (653)
Q Consensus       408 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~  487 (653)
                      |+++++|.+++...     ..+++..++.++.|+++||.|||+   ++|+||||||+||+++.++.+||+|||+++....
T Consensus        83 ~~~~~~l~~~~~~~-----~~~~~~~~~~i~~~l~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~  154 (311)
T 4agu_A           83 YCDHTVLHELDRYQ-----RGVPEHLVKSITWQTLQAVNFCHK---HNCIHRDVKPENILITKHSVIKLCDFGFARLLTG  154 (311)
T ss_dssp             CCSEEHHHHHHHTS-----SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECC-
T ss_pred             eCCCchHHHHHhhh-----cCCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCCChhhEEEcCCCCEEEeeCCCchhccC
Confidence            99999999887653     348999999999999999999999   8999999999999999999999999999987653


Q ss_pred             CCCCcccccccCCcccCcccccc-CCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhh-
Q 048419          488 GANPQTTHIVGTLGYLAPELTRT-GKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAID-  565 (653)
Q Consensus       488 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d-  565 (653)
                      .. .......||..|+|||.+.+ ..++.++|||||||++|||++|+.||......+.............. ....... 
T Consensus       155 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  232 (311)
T 4agu_A          155 PS-DYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIP-RHQQVFST  232 (311)
T ss_dssp             ------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCH-HHHHHHHT
T ss_pred             cc-cccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhccccc-cccccccc
Confidence            22 22234578999999999876 56899999999999999999999999876544332221111000000 0000000 


Q ss_pred             ------hcc---Cc-CC-----HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          566 ------QTL---DY-YD-----LAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       566 ------~~l---~~-~~-----~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                            ..+   .. ..     ......+.+++.+||+.||.+|||+.|++++-.
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~  287 (311)
T 4agu_A          233 NQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPY  287 (311)
T ss_dssp             CGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTSGG
T ss_pred             ccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcChH
Confidence                  000   00 00     112456889999999999999999999998653

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=100.00  E-value=2.4e-40  Score=339.54  Aligned_cols=255  Identities=23%  Similarity=0.335  Sum_probs=209.4

Q ss_pred             hhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC--chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEE
Q 048419          328 VTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLV  405 (653)
Q Consensus       328 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV  405 (653)
                      ..++|+..+.||+|+||.||+|.+..+++.||+|++...  .....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus         4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v   83 (284)
T 3kk8_A            4 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV   83 (284)
T ss_dssp             TTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hhhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEE
Confidence            457899999999999999999999999999999998653  344567888999999999999999999999999999999


Q ss_pred             EeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCc---EEEEeecCc
Q 048419          406 YDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLN---AKLGDFGLA  482 (653)
Q Consensus       406 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~---~kl~DfGla  482 (653)
                      |||+++++|.+++...     ..+++.+++.++.|++.||.|||+   ++|+||||||+||+++.++.   +||+|||++
T Consensus        84 ~e~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~  155 (284)
T 3kk8_A           84 FDLVTGGELFEDIVAR-----EFYSEADASHCIQQILESIAYCHS---NGIVHRNLKPENLLLASKAKGAAVKLADFGLA  155 (284)
T ss_dssp             ECCCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESSSSTTCCEEECCCTTC
T ss_pred             EecCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCcCcCCCCHHHEEEecCCCCCcEEEeeceee
Confidence            9999999999888654     348999999999999999999999   89999999999999976655   999999999


Q ss_pred             ccccCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhH
Q 048419          483 KIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQ  562 (653)
Q Consensus       483 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~  562 (653)
                      .......  ......||+.|+|||.+.+..++.++||||||+++|||++|+.||........   ...+......  .  
T Consensus       156 ~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~---~~~~~~~~~~--~--  226 (284)
T 3kk8_A          156 IEVNDSE--AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRL---YAQIKAGAYD--Y--  226 (284)
T ss_dssp             EECCSSC--BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH---HHHHHHTCCC--C--
T ss_pred             EEcccCc--cccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHH---HHHHHhcccc--C--
Confidence            8664322  22345789999999999999999999999999999999999999976543221   1111111000  0  


Q ss_pred             hhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          563 AIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       563 ~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                       ..+..    ......+.+++.+||+.||.+|||+.|++++-
T Consensus       227 -~~~~~----~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~  263 (284)
T 3kk8_A          227 -PSPEW----DTVTPEAKSLIDSMLTVNPKKRITADQALKVP  263 (284)
T ss_dssp             -CTTTT----TTSCHHHHHHHHHHSCSSTTTSCCHHHHTTSH
T ss_pred             -Cchhh----cccCHHHHHHHHHHcccChhhCCCHHHHhcCc
Confidence             00000    11235688999999999999999999999854

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=100.00  E-value=7.6e-41  Score=348.07  Aligned_cols=261  Identities=22%  Similarity=0.343  Sum_probs=211.4

Q ss_pred             hcCcCcceeeeeeCcEEEEEEEe-----CCCCcEEEEEEeccCc-hhhHHHHHHHHHHHhhc-CCCceeeeeeeecccce
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGLM-----PSLGLEVAIKRIGHNS-QQGMKEFVAEIMSMGRL-RHRNLVQLHGWCRKQDE  401 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~~-----~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~  401 (653)
                      .++|...+.||+|+||.||+|.+     ..+++.||||++.... ....+.+.+|+.+++++ +||||+++++++...+.
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~  101 (313)
T 1t46_A           22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP  101 (313)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCC
Confidence            35788899999999999999984     4567899999997553 34567899999999999 99999999999999999


Q ss_pred             eEEEEeccCCCCchhhhhccccc-------------ccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEE
Q 048419          402 LLLVYDYVPNGSLDKLLFDKDHK-------------LRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILL  468 (653)
Q Consensus       402 ~~lV~E~~~~gsL~~~l~~~~~~-------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll  468 (653)
                      .++||||+++|+|.+++......             ....+++.+++.++.||++||.|||+   ++|+||||||+||++
T Consensus       102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~  178 (313)
T 1t46_A          102 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLAS---KNCIHRDLAARNILL  178 (313)
T ss_dssp             CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEE
T ss_pred             cEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCccceEEE
Confidence            99999999999999999765321             12358999999999999999999999   899999999999999


Q ss_pred             cCCCcEEEEeecCcccccCCCCCc-ccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHH
Q 048419          469 DTYLNAKLGDFGLAKIYEHGANPQ-TTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELL  546 (653)
Q Consensus       469 ~~~~~~kl~DfGla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~  546 (653)
                      +.++.+||+|||+++......... .....+|+.|+|||.+.+..++.++|||||||++|||++ |+.||........  
T Consensus       179 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~--  256 (313)
T 1t46_A          179 THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK--  256 (313)
T ss_dssp             ETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHH--
T ss_pred             cCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhH--
Confidence            999999999999998765443221 223457889999999998899999999999999999999 9999876443211  


Q ss_pred             HHHHHHhhhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          547 LVDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       547 l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                      +...+.....            ..........+.+++.+||+.||.+|||+.|++++|+.
T Consensus       257 ~~~~~~~~~~------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~  304 (313)
T 1t46_A          257 FYKMIKEGFR------------MLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEK  304 (313)
T ss_dssp             HHHHHHHTCC------------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHHhccCCC------------CCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHH
Confidence            1111111100            00111234678899999999999999999999999964

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=100.00  E-value=3.3e-41  Score=353.49  Aligned_cols=254  Identities=24%  Similarity=0.359  Sum_probs=203.0

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcE----EEEEEeccC-chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLE----VAIKRIGHN-SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLL  404 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~----vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  404 (653)
                      ++|...+.||+|+||.||+|.+..+++.    ||+|.+... .....+.+.+|+.++++++||||++++++|. .+..++
T Consensus        13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~   91 (325)
T 3kex_A           13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQL   91 (325)
T ss_dssp             TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEE
T ss_pred             hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEE
Confidence            4688899999999999999998777665    788877543 2333456788999999999999999999986 456899


Q ss_pred             EEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccc
Q 048419          405 VYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKI  484 (653)
Q Consensus       405 V~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~  484 (653)
                      ||||+++|+|.+++....    ..+++..++.++.||++||.|||+   ++|+||||||+|||++.++.+||+|||+++.
T Consensus        92 v~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~  164 (325)
T 3kex_A           92 VTQYLPLGSLLDHVRQHR----GALGPQLLLNWGVQIAKGMYYLEE---HGMVHRNLAARNVLLKSPSQVQVADFGVADL  164 (325)
T ss_dssp             EEECCTTCBSHHHHHSSG----GGSCTTHHHHHHHHHHHHHHHHHH---TTCCCSCCSSTTEEESSSSCEEECSCSGGGG
T ss_pred             EEEeCCCCCHHHHHHHcc----ccCCHHHHHHHHHHHHHHHHHHHh---CCCCCCccchheEEECCCCeEEECCCCcccc
Confidence            999999999999997652    458999999999999999999999   8999999999999999999999999999997


Q ss_pred             ccCCCCC-cccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhhcccchhH
Q 048419          485 YEHGANP-QTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELHLEGEITQ  562 (653)
Q Consensus       485 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~  562 (653)
                      ....... ......++..|+|||.+.+..++.++|||||||++|||++ |+.||........   .+.+.....      
T Consensus       165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~---~~~~~~~~~------  235 (325)
T 3kex_A          165 LPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEV---PDLLEKGER------  235 (325)
T ss_dssp             SCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHH---HHHHHTTCB------
T ss_pred             cCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHH---HHHHHcCCC------
Confidence            6543322 2234567889999999998999999999999999999999 9999986543221   111111100      


Q ss_pred             hhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          563 AIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       563 ~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                            ...+......+.+++.+||+.||.+||++.|++++|+.
T Consensus       236 ------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~  273 (325)
T 3kex_A          236 ------LAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTR  273 (325)
T ss_dssp             ------CCCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHH
T ss_pred             ------CCCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence                  00111123357789999999999999999999999965

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=100.00  E-value=1.8e-40  Score=341.11  Aligned_cols=253  Identities=26%  Similarity=0.468  Sum_probs=204.7

Q ss_pred             hcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchh-------hHHHHHHHHHHHhhcCCCceeeeeeeecccce
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQ-------GMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDE  401 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~-------~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~  401 (653)
                      .++|...+.||+|+||.||+|.+..+++.||||++......       ..+.+.+|+.++++++||||+++++++.+.. 
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-   96 (287)
T 4f0f_A           18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP-   96 (287)
T ss_dssp             STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred             hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence            36788899999999999999999989999999998653221       1267899999999999999999999997765 


Q ss_pred             eEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCC--eEecCCCCCcEEEcCCCc-----E
Q 048419          402 LLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQR--VVHRDVKPSNILLDTYLN-----A  474 (653)
Q Consensus       402 ~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~--ivH~Dlkp~NIll~~~~~-----~  474 (653)
                       ++||||+++|+|.+++....    ..+++..++.++.|++.||+|||+   ++  |+||||||+|||++.++.     +
T Consensus        97 -~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~~l~~~l~~lH~---~~~~ivH~dikp~Nil~~~~~~~~~~~~  168 (287)
T 4f0f_A           97 -RMVMEFVPCGDLYHRLLDKA----HPIKWSVKLRLMLDIALGIEYMQN---QNPPIVHRDLRSPNIFLQSLDENAPVCA  168 (287)
T ss_dssp             -EEEEECCTTCBHHHHHHCTT----SCCCHHHHHHHHHHHHHHHHHHHT---SSSCCBCSCCSGGGEEESCCCTTCSCCE
T ss_pred             -eEEEEecCCCCHHHHHhccc----CCccHHHHHHHHHHHHHHHHHHHh---CCCCeecCCCCcceEEEeccCCCCceeE
Confidence             69999999999999887653    458999999999999999999999   78  999999999999988776     9


Q ss_pred             EEEeecCcccccCCCCCcccccccCCcccCccccc--cCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHH
Q 048419          475 KLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTR--TGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVK  552 (653)
Q Consensus       475 kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~  552 (653)
                      ||+|||+++....    ......||+.|+|||.+.  ...++.++|||||||++|||++|+.||......... ......
T Consensus       169 kl~Dfg~~~~~~~----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~-~~~~~~  243 (287)
T 4f0f_A          169 KVADFGLSQQSVH----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIK-FINMIR  243 (287)
T ss_dssp             EECCCTTCBCCSS----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHH-HHHHHH
T ss_pred             EeCCCCccccccc----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHH-HHHHHh
Confidence            9999999975432    234457899999999984  455788999999999999999999999764432211 111111


Q ss_pred             hhhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          553 ELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       553 ~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                      .....           ..........+.+++.+||+.||.+|||+.|+++.|+.
T Consensus       244 ~~~~~-----------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~  286 (287)
T 4f0f_A          244 EEGLR-----------PTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSE  286 (287)
T ss_dssp             HSCCC-----------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred             ccCCC-----------CCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHh
Confidence            11100           11112234678999999999999999999999999864

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=7.6e-41  Score=353.28  Aligned_cols=262  Identities=24%  Similarity=0.360  Sum_probs=209.2

Q ss_pred             hcCcCcceeeeeeCcEEEEEEEe-----CCCCcEEEEEEeccC-chhhHHHHHHHHHHHhhc-CCCceeeeeeeecccce
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGLM-----PSLGLEVAIKRIGHN-SQQGMKEFVAEIMSMGRL-RHRNLVQLHGWCRKQDE  401 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~~-----~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~  401 (653)
                      .++|...+.||+|+||.||+|.+     ..++..||||++... .....+.+.+|+.+++++ +||||+++++++...+.
T Consensus        44 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~  123 (344)
T 1rjb_A           44 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGP  123 (344)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             HHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCc
Confidence            46788899999999999999996     345678999999754 333457889999999999 89999999999999999


Q ss_pred             eEEEEeccCCCCchhhhhccccc------------------ccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCC
Q 048419          402 LLLVYDYVPNGSLDKLLFDKDHK------------------LRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKP  463 (653)
Q Consensus       402 ~~lV~E~~~~gsL~~~l~~~~~~------------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp  463 (653)
                      .++||||+++|+|.+++......                  ....+++..++.++.||+.||.|||+   ++|+||||||
T Consensus       124 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp  200 (344)
T 1rjb_A          124 IYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF---KSCVHRDLAA  200 (344)
T ss_dssp             CEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHH---TTEEETTCSG
T ss_pred             cEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCh
Confidence            99999999999999999765321                  01347899999999999999999999   8999999999


Q ss_pred             CcEEEcCCCcEEEEeecCcccccCCCCC-cccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhh
Q 048419          464 SNILLDTYLNAKLGDFGLAKIYEHGANP-QTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKA  541 (653)
Q Consensus       464 ~NIll~~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~  541 (653)
                      +|||++.++.+||+|||++......... ......+|+.|+|||.+.+..++.++|||||||++|||+| |+.||.....
T Consensus       201 ~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~  280 (344)
T 1rjb_A          201 RNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPV  280 (344)
T ss_dssp             GGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC
T ss_pred             hhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCc
Confidence            9999999999999999999876543322 2233467889999999998899999999999999999998 9999976543


Q ss_pred             hhHHHHHHHHHhhhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcCC
Q 048419          542 AAELLLVDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLGD  607 (653)
Q Consensus       542 ~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  607 (653)
                      ...  +...+.....            ...+......+.+|+.+||+.||.+|||+.|++++|+..
T Consensus       281 ~~~--~~~~~~~~~~------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~  332 (344)
T 1rjb_A          281 DAN--FYKLIQNGFK------------MDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQ  332 (344)
T ss_dssp             SHH--HHHHHHTTCC------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHH--HHHHHhcCCC------------CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHH
Confidence            211  1111111100            011112346788999999999999999999999999753

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=100.00  E-value=7.8e-41  Score=366.68  Aligned_cols=255  Identities=28%  Similarity=0.403  Sum_probs=203.4

Q ss_pred             hcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEec
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDY  408 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~  408 (653)
                      .++|...+.||+|+||.||+|.+.. +..||||++.... ...+.|.+|+.++++++||||+++++++.+ +..++||||
T Consensus       183 ~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~  259 (452)
T 1fmk_A          183 RESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEY  259 (452)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETT-TEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECC
T ss_pred             hhHceeeeeecCCCCeEEEEEEECC-CceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehh
Confidence            3567788999999999999999975 5679999997543 235689999999999999999999999976 678999999


Q ss_pred             cCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCC
Q 048419          409 VPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHG  488 (653)
Q Consensus       409 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~  488 (653)
                      +++|+|.+++....   ...+++.+++.++.||+.||+|||+   ++|+||||||+|||++.++.+||+|||+++.....
T Consensus       260 ~~~gsL~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~  333 (452)
T 1fmk_A          260 MSKGSLLDFLKGET---GKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDN  333 (452)
T ss_dssp             CTTCBHHHHHSHHH---HTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCCTTC-----
T ss_pred             hcCCCHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChhhEEECCCCCEEECCCccceecCCC
Confidence            99999999997543   3458999999999999999999999   89999999999999999999999999999876543


Q ss_pred             CCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhc
Q 048419          489 ANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQT  567 (653)
Q Consensus       489 ~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~  567 (653)
                      .........++..|+|||.+....++.++|||||||++|||++ |+.||......+   +.+.+....           +
T Consensus       334 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~---~~~~i~~~~-----------~  399 (452)
T 1fmk_A          334 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE---VLDQVERGY-----------R  399 (452)
T ss_dssp             ---------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH---HHHHHHTTC-----------C
T ss_pred             ceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHH---HHHHHHcCC-----------C
Confidence            3223333457789999999998999999999999999999999 999997654322   111111110           0


Q ss_pred             cCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcCC
Q 048419          568 LDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLGD  607 (653)
Q Consensus       568 l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  607 (653)
                      + ..+......+.+|+.+||+.||.+|||+.+|++.|+..
T Consensus       400 ~-~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~  438 (452)
T 1fmk_A          400 M-PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY  438 (452)
T ss_dssp             C-CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTT
T ss_pred             C-CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence            0 11122346788999999999999999999999999864

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=100.00  E-value=1.3e-40  Score=364.73  Aligned_cols=248  Identities=30%  Similarity=0.390  Sum_probs=203.8

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccc-eeEEEEec
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQD-ELLLVYDY  408 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~-~~~lV~E~  408 (653)
                      ++|...+.||+|+||.||+|.+.  ++.||||+++...  ..+.|.+|+.++++++||||++++++|.+.+ .+++||||
T Consensus       193 ~~~~~~~~lG~G~fg~V~~~~~~--~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~  268 (450)
T 1k9a_A          193 KELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY  268 (450)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEET--TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEEC
T ss_pred             HHeEEEeeecCcCCeeEEEEEec--CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEe
Confidence            46778899999999999999986  6799999996543  4578999999999999999999999987665 78999999


Q ss_pred             cCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCC
Q 048419          409 VPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHG  488 (653)
Q Consensus       409 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~  488 (653)
                      +++|+|.+++....   ...+++..++.++.||++||+|||+   ++|+||||||+|||++.++.+||+|||+++.....
T Consensus       269 ~~~g~L~~~l~~~~---~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~  342 (450)
T 1k9a_A          269 MAKGSLVDYLRSRG---RSVLGGDCLLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST  342 (450)
T ss_dssp             CTTCBHHHHHHHHC---TTTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTSCEEECCCTTCEECC--
T ss_pred             cCCCcHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCHhhEEECCCCCEEEeeCCCccccccc
Confidence            99999999997653   3347899999999999999999999   89999999999999999999999999999854322


Q ss_pred             CCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhc
Q 048419          489 ANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQT  567 (653)
Q Consensus       489 ~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~  567 (653)
                          .....++..|+|||.+.+..++.++|||||||++|||++ |+.||......+.   ...+..    +.       .
T Consensus       343 ----~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~---~~~i~~----~~-------~  404 (450)
T 1k9a_A          343 ----QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDV---VPRVEK----GY-------K  404 (450)
T ss_dssp             --------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTH---HHHHHT----TC-------C
T ss_pred             ----ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH---HHHHHc----CC-------C
Confidence                122357889999999999999999999999999999998 9999976543221   111111    10       0


Q ss_pred             cCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          568 LDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       568 l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                       ...+......+.+|+.+||+.||.+|||+.++++.|+.
T Consensus       405 -~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~  442 (450)
T 1k9a_A          405 -MDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEH  442 (450)
T ss_dssp             -CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             -CCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence             01122335678899999999999999999999998864

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=6.4e-41  Score=340.44  Aligned_cols=253  Identities=26%  Similarity=0.384  Sum_probs=207.5

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEecc
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYV  409 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~  409 (653)
                      ++|...+.||+|+||.||+|.+. ++..||+|++..... ..+.+.+|++++++++||||+++++++.+.+..++||||+
T Consensus         8 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   85 (267)
T 3t9t_A            8 SELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFM   85 (267)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCC
T ss_pred             hheeeeeEecCCCceeEEEEEec-CCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCC
Confidence            56788999999999999999986 478899999975433 3467899999999999999999999999999999999999


Q ss_pred             CCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCC
Q 048419          410 PNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGA  489 (653)
Q Consensus       410 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~  489 (653)
                      ++++|.+++....    ..+++..++.++.|+++||.|||+   ++++|+||||+||+++.++.+||+|||++.......
T Consensus        86 ~~~~L~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~  158 (267)
T 3t9t_A           86 EHGCLSDYLRTQR----GLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ  158 (267)
T ss_dssp             TTCBHHHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHH
T ss_pred             CCCcHHHHHhhCc----ccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCchheEEECCCCCEEEccccccccccccc
Confidence            9999999997642    358899999999999999999999   899999999999999999999999999998654322


Q ss_pred             CCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhcc
Q 048419          490 NPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTL  568 (653)
Q Consensus       490 ~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l  568 (653)
                      ........++..|+|||.+.+..++.++||||||+++|||++ |+.||.......   ....+.....            
T Consensus       159 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~---~~~~i~~~~~------------  223 (267)
T 3t9t_A          159 YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE---VVEDISTGFR------------  223 (267)
T ss_dssp             HHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH---HHHHHHTTCC------------
T ss_pred             ccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHH---HHHHHhcCCc------------
Confidence            112233456788999999998899999999999999999999 899997654321   1111111100            


Q ss_pred             CcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          569 DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       569 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                      ...+......+.+++.+||+.||.+||++.+++++|+.
T Consensus       224 ~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~  261 (267)
T 3t9t_A          224 LYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAE  261 (267)
T ss_dssp             CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             CCCCccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence            00111224568899999999999999999999999864

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=100.00  E-value=1.3e-40  Score=340.93  Aligned_cols=250  Identities=25%  Similarity=0.379  Sum_probs=205.5

Q ss_pred             hcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc---hhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEE
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS---QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLV  405 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV  405 (653)
                      .++|...+.||+|+||.||+|.+..++..||||++....   ....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   87 (279)
T 3fdn_A            8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI   87 (279)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence            467888999999999999999999999999999985432   22356788999999999999999999999999999999


Q ss_pred             EeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccc
Q 048419          406 YDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIY  485 (653)
Q Consensus       406 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~  485 (653)
                      |||+++++|.+++...     ..+++..++.++.||+.||.|||+   ++|+||||||+||+++.++.+||+|||++...
T Consensus        88 ~e~~~~~~l~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~LH~---~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~  159 (279)
T 3fdn_A           88 LEYAPLGTVYRELQKL-----SKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHA  159 (279)
T ss_dssp             ECCCTTEEHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHT---TTCEECCCCGGGEEECTTSCEEECSCCEESCC
T ss_pred             EecCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCEecccCChHhEEEcCCCCEEEEeccccccC
Confidence            9999999999998654     348899999999999999999999   89999999999999999999999999998654


Q ss_pred             cCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhh
Q 048419          486 EHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAID  565 (653)
Q Consensus       486 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d  565 (653)
                      ...   ......|++.|+|||.+.+..++.++||||||+++|||++|+.||.........   ..+...           
T Consensus       160 ~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~---~~~~~~-----------  222 (279)
T 3fdn_A          160 PSS---RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY---KRISRV-----------  222 (279)
T ss_dssp             -----------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHH---HHHHHT-----------
T ss_pred             Ccc---cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHH---HHHHhC-----------
Confidence            322   223457899999999999989999999999999999999999999865432211   111110           


Q ss_pred             hccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          566 QTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       566 ~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                        ....+......+.+++.+||+.||.+||++.|++++-.
T Consensus       223 --~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h~~  260 (279)
T 3fdn_A          223 --EFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW  260 (279)
T ss_dssp             --CCCCCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHCHH
T ss_pred             --CCCCCCcCCHHHHHHHHHHhccChhhCCCHHHHhhCcc
Confidence              00111122456789999999999999999999998653

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=100.00  E-value=1.5e-40  Score=347.28  Aligned_cols=267  Identities=25%  Similarity=0.378  Sum_probs=196.3

Q ss_pred             hcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc-hhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEe
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS-QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYD  407 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E  407 (653)
                      .++|+..+.||+|+||.||+|.+..+++.||||++.... ....+.+.+|+.++++++||||+++++++...+..++|||
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   83 (317)
T 2pmi_A            4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE   83 (317)
T ss_dssp             ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred             ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence            467888999999999999999999889999999996543 2334678899999999999999999999999999999999


Q ss_pred             ccCCCCchhhhhccccc-ccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccccc
Q 048419          408 YVPNGSLDKLLFDKDHK-LRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE  486 (653)
Q Consensus       408 ~~~~gsL~~~l~~~~~~-~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~  486 (653)
                      |++ |+|.+++...... ....+++..+..++.||++||.|||+   ++|+||||||+|||++.++.+||+|||+++...
T Consensus        84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~  159 (317)
T 2pmi_A           84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHE---NKILHRDLKPQNLLINKRGQLKLGDFGLARAFG  159 (317)
T ss_dssp             CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred             ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence            998 5999988764311 12358899999999999999999999   899999999999999999999999999998764


Q ss_pred             CCCCCcccccccCCcccCccccccC-CCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhc--cc-----
Q 048419          487 HGANPQTTHIVGTLGYLAPELTRTG-KATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHL--EG-----  558 (653)
Q Consensus       487 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~--~~-----  558 (653)
                      .... ......||+.|+|||.+.+. .++.++|||||||++|||++|+.||...........  .......  ..     
T Consensus       160 ~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~--i~~~~~~~~~~~~~~~  236 (317)
T 2pmi_A          160 IPVN-TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKL--IFDIMGTPNESLWPSV  236 (317)
T ss_dssp             SCCC-CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH--HHHHHCSCCTTTCGGG
T ss_pred             CCcc-cCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHH--HHHHhCCCChhHhhhh
Confidence            3222 22345789999999998764 689999999999999999999999986554332211  1111000  00     


Q ss_pred             ----------------chhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          559 ----------------EITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       559 ----------------~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                                      .+.+.+.+..   .......+.+++.+||+.||.+|||+.|++++-.
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~  296 (317)
T 2pmi_A          237 TKLPKYNPNIQQRPPRDLRQVLQPHT---KEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPW  296 (317)
T ss_dssp             GGCTTCCTTCCCCCCCCSHHHHGGGC---SSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGG
T ss_pred             hhhhhcccccccccchhHHHhhcccc---cccCCHHHHHHHHHHCCCCcccCCCHHHHhCChh
Confidence                            0000111111   0112357899999999999999999999998653

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=100.00  E-value=2.9e-40  Score=345.61  Aligned_cols=256  Identities=23%  Similarity=0.329  Sum_probs=210.1

Q ss_pred             hhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCch------hhHHHHHHHHHHHhhcCCCceeeeeeeecccce
Q 048419          328 VTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQ------QGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDE  401 (653)
Q Consensus       328 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~  401 (653)
                      ..++|...+.||+|+||.||+|.+..+|+.||||.+.....      ...+.+.+|+.++++++||||+++++++.+.+.
T Consensus        10 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   89 (321)
T 2a2a_A           10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTD   89 (321)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred             hhccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCE
Confidence            35678899999999999999999998999999999865422      136789999999999999999999999999999


Q ss_pred             eEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCC----cEEEE
Q 048419          402 LLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYL----NAKLG  477 (653)
Q Consensus       402 ~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~----~~kl~  477 (653)
                      .++||||+++++|.+++...     ..+++..++.++.|++.||.|||+   ++|+||||||+||+++.++    .+||+
T Consensus        90 ~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~lH~---~~ivH~dikp~NIl~~~~~~~~~~~kl~  161 (321)
T 2a2a_A           90 VVLILELVSGGELFDFLAQK-----ESLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLI  161 (321)
T ss_dssp             EEEEECCCCSCBHHHHHHTC-----SCEEHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCTTSSSCCEEEC
T ss_pred             EEEEEEcCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCChHHEEEecCCCCcCCEEEc
Confidence            99999999999999999753     348999999999999999999999   8999999999999999887    79999


Q ss_pred             eecCcccccCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcc
Q 048419          478 DFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLE  557 (653)
Q Consensus       478 DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~  557 (653)
                      |||++.......  ......||+.|+|||.+.+..++.++|||||||++|||++|+.||.........   ..+...  .
T Consensus       162 Dfg~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~---~~i~~~--~  234 (321)
T 2a2a_A          162 DFGLAHEIEDGV--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL---ANITSV--S  234 (321)
T ss_dssp             CCTTCEECCTTC--CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHH---HHHHTT--C
T ss_pred             cCccceecCccc--cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHH---HHHHhc--c
Confidence            999998765432  223457899999999999889999999999999999999999999765432211   111110  0


Q ss_pred             cchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          558 GEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       558 ~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                      ........   .    .....+.+++.+||+.||.+|||+.|++++-.
T Consensus       235 ~~~~~~~~---~----~~~~~~~~li~~~l~~dp~~Rps~~e~l~hp~  275 (321)
T 2a2a_A          235 YDFDEEFF---S----HTSELAKDFIRKLLVKETRKRLTIQEALRHPW  275 (321)
T ss_dssp             CCCCHHHH---T----TCCHHHHHHHHTTSCSSTTTSCCHHHHHHSTT
T ss_pred             cccChhhh---c----ccCHHHHHHHHHHcCCChhhCcCHHHHhcCcc
Confidence            00000000   0    12356889999999999999999999998643

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=100.00  E-value=1.3e-40  Score=342.68  Aligned_cols=263  Identities=25%  Similarity=0.354  Sum_probs=202.0

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc--hhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEe
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS--QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYD  407 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E  407 (653)
                      ++|...+.||+|+||.||+|.+ .+++.||||++....  ....+.+.+|++++++++||||+++++++...+..++|||
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   80 (288)
T 1ob3_A            2 EKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFE   80 (288)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEE-TTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred             ccchhhhhcccCCCEEEEEEEc-CCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEE
Confidence            4688899999999999999998 568999999996543  2234678899999999999999999999999999999999


Q ss_pred             ccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccC
Q 048419          408 YVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEH  487 (653)
Q Consensus       408 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~  487 (653)
                      |+++ +|.+++....    ..+++.+++.++.||++||.|||+   ++|+||||||+|||++.++.+||+|||+++....
T Consensus        81 ~~~~-~l~~~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~  152 (288)
T 1ob3_A           81 HLDQ-DLKKLLDVCE----GGLESVTAKSFLLQLLNGIAYCHD---RRVLHRDLKPQNLLINREGELKIADFGLARAFGI  152 (288)
T ss_dssp             CCSE-EHHHHHHTST----TCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC
T ss_pred             ecCC-CHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCCEEEeECccccccCc
Confidence            9975 8988886542    348899999999999999999999   8999999999999999999999999999987643


Q ss_pred             CCCCcccccccCCcccCccccccC-CCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhc--ccchhH--
Q 048419          488 GANPQTTHIVGTLGYLAPELTRTG-KATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHL--EGEITQ--  562 (653)
Q Consensus       488 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~--~~~~~~--  562 (653)
                      .. .......||+.|+|||.+.+. .++.++|||||||++|||++|+.||..........  ........  ......  
T Consensus       153 ~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~--~~~~~~~~~~~~~~~~~~  229 (288)
T 1ob3_A          153 PV-RKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLM--RIFRILGTPNSKNWPNVT  229 (288)
T ss_dssp             ----------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH--HHHHHHCCCCTTTSTTGG
T ss_pred             cc-cccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH--HHHHHHCCCChhhchhhh
Confidence            22 222345789999999998754 58999999999999999999999998654432211  11111100  000000  


Q ss_pred             ---hhhhccC--------cCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          563 ---AIDQTLD--------YYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       563 ---~~d~~l~--------~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                         ..++...        .........+.+++.+||+.||.+|||+.|++++-
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp  282 (288)
T 1ob3_A          230 ELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHA  282 (288)
T ss_dssp             GSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSG
T ss_pred             cccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcCc
Confidence               0011110        01112346788999999999999999999999764

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=100.00  E-value=1.2e-40  Score=355.06  Aligned_cols=266  Identities=18%  Similarity=0.210  Sum_probs=207.1

Q ss_pred             hhcCcCcceeeeeeCcEEEEEEEeCCC-----CcEEEEEEeccCchhhH-----------HHHHHHHHHHhhcCCCceee
Q 048419          328 VTKGFGEQNLVGSGGFGRVYRGLMPSL-----GLEVAIKRIGHNSQQGM-----------KEFVAEIMSMGRLRHRNLVQ  391 (653)
Q Consensus       328 at~~f~~~~~LG~G~fg~Vy~~~~~~~-----~~~vavK~~~~~~~~~~-----------~~~~~E~~~l~~l~H~niv~  391 (653)
                      ..++|...+.||+|+||.||+|.+..+     ++.||||++........           ..+..|+..++.++|+||++
T Consensus        33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~  112 (364)
T 3op5_A           33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK  112 (364)
T ss_dssp             TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred             CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence            446899999999999999999998764     57899999865542211           12445666778889999999


Q ss_pred             eeeeeccc----ceeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEE
Q 048419          392 LHGWCRKQ----DELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNIL  467 (653)
Q Consensus       392 l~g~~~~~----~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIl  467 (653)
                      +++++...    ...++||||+ +++|.+++...    ...+++.+++.++.||+.||.|||+   ++|+||||||+|||
T Consensus       113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~----~~~l~~~~~~~i~~qi~~~l~~lH~---~~iiHrDlkp~Nil  184 (364)
T 3op5_A          113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEAN----AKRFSRKTVLQLSLRILDILEYIHE---HEYVHGDIKASNLL  184 (364)
T ss_dssp             EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHT----TSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEE
T ss_pred             EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEEecCCHHHEE
Confidence            99998765    4589999999 99999999764    2458999999999999999999999   89999999999999


Q ss_pred             Ec--CCCcEEEEeecCcccccCCCCC------cccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChh
Q 048419          468 LD--TYLNAKLGDFGLAKIYEHGANP------QTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQ  539 (653)
Q Consensus       468 l~--~~~~~kl~DfGla~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~  539 (653)
                      ++  .++.+||+|||+++.+......      ......||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus       185 l~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~  264 (364)
T 3op5_A          185 LNYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDN  264 (364)
T ss_dssp             EESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGG
T ss_pred             EecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCcccc
Confidence            98  8899999999999876432111      113345999999999999999999999999999999999999999864


Q ss_pred             hhhhHHHHHHHHHhhhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          540 KAAAELLLVDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       540 ~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                      .....  ........ ....+.+.+++.+..  ......+.+++..||+.+|.+||++.+|++.|+.
T Consensus       265 ~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~  326 (364)
T 3op5_A          265 LKDPK--YVRDSKIR-YRENIASLMDKCFPA--ANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQ  326 (364)
T ss_dssp             TTCHH--HHHHHHHH-HHHCHHHHHHHHSCT--TCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHH
T ss_pred             ccCHH--HHHHHHHH-hhhhHHHHHHHhccc--ccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence            33221  11111111 122344455544311  1124678899999999999999999999998853

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=100.00  E-value=1.4e-40  Score=345.87  Aligned_cols=268  Identities=26%  Similarity=0.307  Sum_probs=203.9

Q ss_pred             HhhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc-----hhhHHHHHHHHHHHhhc---CCCceeeeeeeecc
Q 048419          327 SVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS-----QQGMKEFVAEIMSMGRL---RHRNLVQLHGWCRK  398 (653)
Q Consensus       327 ~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l---~H~niv~l~g~~~~  398 (653)
                      ..+++|+..+.||+|+||.||+|.+..+++.||||++....     ......+.+|+.+++++   +||||++++++|..
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~   85 (308)
T 3g33_A            6 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCAT   85 (308)
T ss_dssp             ----CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEE
T ss_pred             ccccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeec
Confidence            34678999999999999999999998899999999986432     11224556677766666   49999999999977


Q ss_pred             cc-----eeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCc
Q 048419          399 QD-----ELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLN  473 (653)
Q Consensus       399 ~~-----~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~  473 (653)
                      ..     ..++||||+. ++|.+++....   ...+++.+++.++.||+.||+|||+   ++|+||||||+|||++.++.
T Consensus        86 ~~~~~~~~~~lv~e~~~-~~L~~~~~~~~---~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~Nil~~~~~~  158 (308)
T 3g33_A           86 SRTDREIKVTLVFEHVD-QDLRTYLDKAP---PPGLPAETIKDLMRQFLRGLDFLHA---NCIVHRDLKPENILVTSGGT  158 (308)
T ss_dssp             CCSSSEEEEEEEEECCC-CBHHHHHHTCC---TTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCTTTEEECTTSC
T ss_pred             cCCCCceeEEEEehhhh-cCHHHHHhhcc---CCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEcCCCC
Confidence            54     5799999997 59999997654   2448999999999999999999999   89999999999999999999


Q ss_pred             EEEEeecCcccccCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHh
Q 048419          474 AKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKE  553 (653)
Q Consensus       474 ~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~  553 (653)
                      +||+|||+++......  ......||+.|+|||.+.+..++.++|||||||++|||++|+.||..........  .....
T Consensus       159 ~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~--~i~~~  234 (308)
T 3g33_A          159 VKLADFGLARIYSYQM--ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLG--KIFDL  234 (308)
T ss_dssp             EEECSCSCTTTSTTCC--CSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHH--HHHHH
T ss_pred             EEEeeCccccccCCCc--ccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH--HHHHH
Confidence            9999999998764332  2345678999999999999999999999999999999999999998655433211  11111


Q ss_pred             hh--cccchhHhh---hhcc---CcCC-----HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          554 LH--LEGEITQAI---DQTL---DYYD-----LAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       554 ~~--~~~~~~~~~---d~~l---~~~~-----~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                      ..  .........   ....   ....     ......+.+++.+||+.||.+|||+.|++++-.
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h~~  299 (308)
T 3g33_A          235 IGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSY  299 (308)
T ss_dssp             HCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTT
T ss_pred             hCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcCcc
Confidence            10  000000000   0000   0000     112367889999999999999999999998653

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=100.00  E-value=1.5e-40  Score=338.05  Aligned_cols=249  Identities=18%  Similarity=0.306  Sum_probs=203.9

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC--chhhHHHHHHHHHHHhhcCCCceeeeeeeeccc--ceeEEE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQ--DELLLV  405 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~--~~~~lV  405 (653)
                      ++|...+.||+|+||.||+|.+.  +..||||++...  .....+.+.+|+.++++++||||+++++++.+.  +..++|
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~--~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv   87 (271)
T 3kmu_A           10 KQLNFLTKLNENHSGELWKGRWQ--GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLI   87 (271)
T ss_dssp             GGCEEEEEEEEETTEEEEEEEET--TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEE
T ss_pred             HHhHHHHHhcCCCcceEEEEEEC--CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEee
Confidence            56888999999999999999985  789999999754  345567899999999999999999999999887  778999


Q ss_pred             EeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCC--eEecCCCCCcEEEcCCCcEEEEeecCcc
Q 048419          406 YDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQR--VVHRDVKPSNILLDTYLNAKLGDFGLAK  483 (653)
Q Consensus       406 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~--ivH~Dlkp~NIll~~~~~~kl~DfGla~  483 (653)
                      |||+++|+|.+++....   ...+++.+++.++.||++||.|||+   ++  ++||||||+||+++.++.++|+|||++.
T Consensus        88 ~e~~~~~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~---~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~  161 (271)
T 3kmu_A           88 THWMPYGSLYNVLHEGT---NFVVDQSQAVKFALDMARGMAFLHT---LEPLIPRHALNSRSVMIDEDMTARISMADVKF  161 (271)
T ss_dssp             EECCTTCBHHHHHHSCS---SCCCCHHHHHHHHHHHHHHHHHHTT---SSSCCTTCCCSGGGEEECTTSCEEEEGGGSCC
T ss_pred             ecccCCCcHHHHHhhcc---cCCCCHHHHHHHHHHHHHHHHHHhc---CCCceecCCCccceEEEcCCcceeEEecccee
Confidence            99999999999997654   3358999999999999999999999   78  9999999999999999999999999876


Q ss_pred             cccCCCCCcccccccCCcccCccccccCCCCC---ccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccch
Q 048419          484 IYEHGANPQTTHIVGTLGYLAPELTRTGKATT---STDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEI  560 (653)
Q Consensus       484 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~---ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~  560 (653)
                      ....      ....||+.|+|||.+.+..++.   ++|||||||++|||++|+.||.........  .. +..   .+. 
T Consensus       162 ~~~~------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~--~~-~~~---~~~-  228 (271)
T 3kmu_A          162 SFQS------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIG--MK-VAL---EGL-  228 (271)
T ss_dssp             TTSC------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHH--HH-HHH---SCC-
T ss_pred             eecc------cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHH--HH-HHh---cCC-
Confidence            4322      2346899999999998765544   799999999999999999999765432211  00 100   000 


Q ss_pred             hHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          561 TQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       561 ~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                          .   ...+......+.+++.+||+.||.+|||+.|+++.|+.
T Consensus       229 ----~---~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~  267 (271)
T 3kmu_A          229 ----R---PTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEK  267 (271)
T ss_dssp             ----C---CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             ----C---CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence                0   01112234568899999999999999999999999864

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=100.00  E-value=2.2e-40  Score=344.73  Aligned_cols=260  Identities=23%  Similarity=0.235  Sum_probs=202.6

Q ss_pred             hcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC---chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEE
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN---SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLV  405 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV  405 (653)
                      -++|...+.||+|+||.||+|.+..+++.||||++...   .....+.+.+|+.++++++||||+++++++...+..++|
T Consensus        33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv  112 (309)
T 2h34_A           33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD  112 (309)
T ss_dssp             -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence            36789999999999999999999888999999999654   233457889999999999999999999999999999999


Q ss_pred             EeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccc
Q 048419          406 YDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIY  485 (653)
Q Consensus       406 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~  485 (653)
                      |||+++++|.+++...     ..+++.+++.++.|++.||.|||+   ++|+||||||+|||++.++.+||+|||++...
T Consensus       113 ~e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~  184 (309)
T 2h34_A          113 MRLINGVDLAAMLRRQ-----GPLAPPRAVAIVRQIGSALDAAHA---AGATHRDVKPENILVSADDFAYLVDFGIASAT  184 (309)
T ss_dssp             EECCCCEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECSCCC----
T ss_pred             EEecCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CcCCcCCCChHHEEEcCCCCEEEecCccCccc
Confidence            9999999999999754     348999999999999999999999   89999999999999999999999999999876


Q ss_pred             cCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhh
Q 048419          486 EHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAID  565 (653)
Q Consensus       486 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d  565 (653)
                      ............|++.|+|||.+.+..++.++||||||+++|||++|+.||......   .+...+....   ....   
T Consensus       185 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~---~~~~~~~~~~---~~~~---  255 (309)
T 2h34_A          185 TDEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS---VMGAHINQAI---PRPS---  255 (309)
T ss_dssp             ------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH---HHHHHHHSCC---CCGG---
T ss_pred             cccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH---HHHHHhccCC---CCcc---
Confidence            544333334457899999999999889999999999999999999999999865432   1111111110   0000   


Q ss_pred             hccCcCCHHHHHHHHHHHHHcCCCCCCCCC-CHHHHHHHHcCCCC
Q 048419          566 QTLDYYDLAEAELVLNLGLFCSAPNPVYRP-DMRRVVEFLLGDSS  609 (653)
Q Consensus       566 ~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RP-s~~evl~~L~~~~~  609 (653)
                          .........+.+++.+||+.||.+|| ++.++++.|+....
T Consensus       256 ----~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~  296 (309)
T 2h34_A          256 ----TVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALA  296 (309)
T ss_dssp             ----GTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC
T ss_pred             ----ccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHH
Confidence                11112235688999999999999999 99999999976533

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=100.00  E-value=2.2e-40  Score=345.40  Aligned_cols=257  Identities=19%  Similarity=0.281  Sum_probs=202.3

Q ss_pred             cCcCcc-eeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhc-CCCceeeeeeeecccceeEEEEe
Q 048419          330 KGFGEQ-NLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRL-RHRNLVQLHGWCRKQDELLLVYD  407 (653)
Q Consensus       330 ~~f~~~-~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~E  407 (653)
                      +.|... +.||+|+||.||+|.+..+++.||||++........+.+.+|++++.++ +||||+++++++.+.+..++|||
T Consensus        12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e   91 (316)
T 2ac3_A           12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFE   91 (316)
T ss_dssp             TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEE
Confidence            556663 7899999999999999888999999999776666677899999999985 79999999999999999999999


Q ss_pred             ccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCc---EEEEeecCccc
Q 048419          408 YVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLN---AKLGDFGLAKI  484 (653)
Q Consensus       408 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~---~kl~DfGla~~  484 (653)
                      |+++++|.+++...     ..+++.+++.++.||+.||+|||+   ++|+||||||+|||++.++.   +||+|||++..
T Consensus        92 ~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~  163 (316)
T 2ac3_A           92 KMRGGSILSHIHKR-----RHFNELEASVVVQDVASALDFLHN---KGIAHRDLKPENILCEHPNQVSPVKICDFDLGSG  163 (316)
T ss_dssp             CCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-
T ss_pred             cCCCCcHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCceeCCCCHHHEEEccCCCcCceEEEEccCccc
Confidence            99999999999764     348899999999999999999999   89999999999999988776   99999999986


Q ss_pred             ccCCCC------CcccccccCCcccCcccccc-----CCCCCccceeehHHHHHHHHhCCCCCChhhhhh----------
Q 048419          485 YEHGAN------PQTTHIVGTLGYLAPELTRT-----GKATTSTDVYSYGILMLEVACGRRSIEPQKAAA----------  543 (653)
Q Consensus       485 ~~~~~~------~~~~~~~gt~~y~aPE~~~~-----~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~----------  543 (653)
                      ......      .......||+.|+|||.+..     ..++.++|||||||++|||++|+.||......+          
T Consensus       164 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~  243 (316)
T 2ac3_A          164 IKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACP  243 (316)
T ss_dssp             ------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCH
T ss_pred             cccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccch
Confidence            532211      11223468999999999875     458899999999999999999999997643211          


Q ss_pred             --HHHHHHHHHhhhcccchhHhhhhccCcCCH----HHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcCC
Q 048419          544 --ELLLVDWVKELHLEGEITQAIDQTLDYYDL----AEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLGD  607 (653)
Q Consensus       544 --~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~----~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  607 (653)
                        ...+.+.+..             .....+.    .....+.+|+.+||+.||.+|||+.|++++-.-.
T Consensus       244 ~~~~~~~~~i~~-------------~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~  300 (316)
T 2ac3_A          244 ACQNMLFESIQE-------------GKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQ  300 (316)
T ss_dssp             HHHHHHHHHHHH-------------CCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSTTCC
T ss_pred             hHHHHHHHHHhc-------------cCcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcChhhc
Confidence              0001111110             0001111    1235788999999999999999999999976544

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=100.00  E-value=1.7e-40  Score=363.62  Aligned_cols=252  Identities=25%  Similarity=0.308  Sum_probs=199.0

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC---chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN---SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVY  406 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  406 (653)
                      ++|+..+.||+|+||.||+|....+++.||||++...   .......+.+|+.++++++||||++++++|.+.+.+++||
T Consensus       148 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~  227 (446)
T 4ejn_A          148 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVM  227 (446)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEEE
T ss_pred             HHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEEE
Confidence            5688999999999999999999999999999999643   3344567889999999999999999999999999999999


Q ss_pred             eccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccccc
Q 048419          407 DYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE  486 (653)
Q Consensus       407 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~  486 (653)
                      ||+++|+|.+++...     ..+++..++.++.||+.||+|||+.  ++|+||||||+||||+.++.+||+|||+++...
T Consensus       228 e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~--~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~  300 (446)
T 4ejn_A          228 EYANGGELFFHLSRE-----RVFSEDRARFYGAEIVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGI  300 (446)
T ss_dssp             CCCSSCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHH--TCCCCCCCCGGGEEECSSSCEEECCCCCCCTTC
T ss_pred             eeCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHhhc--CCEEECCCCHHHEEECCCCCEEEccCCCceecc
Confidence            999999999998653     3589999999999999999999962  689999999999999999999999999998643


Q ss_pred             CCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhh
Q 048419          487 HGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQ  566 (653)
Q Consensus       487 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  566 (653)
                      ... .......||+.|+|||++.+..++.++|||||||++|||++|+.||........   .+.+...  ..        
T Consensus       301 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~---~~~i~~~--~~--------  366 (446)
T 4ejn_A          301 KDG-ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKL---FELILME--EI--------  366 (446)
T ss_dssp             C------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH---HHHHHHC--CC--------
T ss_pred             CCC-cccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHH---HHHHHhC--CC--------
Confidence            222 223446799999999999999999999999999999999999999976543221   1111110  00        


Q ss_pred             ccCcCCHHHHHHHHHHHHHcCCCCCCCCC-----CHHHHHHHHc
Q 048419          567 TLDYYDLAEAELVLNLGLFCSAPNPVYRP-----DMRRVVEFLL  605 (653)
Q Consensus       567 ~l~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~L~  605 (653)
                         .++......+.+|+.+||+.||.+||     ++.|++++-.
T Consensus       367 ---~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~hp~  407 (446)
T 4ejn_A          367 ---RFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRF  407 (446)
T ss_dssp             ---CCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGG
T ss_pred             ---CCCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhCcc
Confidence               01112245688999999999999999     9999998653

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=100.00  E-value=1.4e-40  Score=342.04  Aligned_cols=257  Identities=25%  Similarity=0.339  Sum_probs=203.6

Q ss_pred             hhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc-hhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEE
Q 048419          328 VTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS-QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVY  406 (653)
Q Consensus       328 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  406 (653)
                      ..++|...+.||+|+||.||++....++..+|+|++.... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus        20 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   99 (285)
T 3is5_A           20 IDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVM   99 (285)
T ss_dssp             HHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEE
Confidence            3467889999999999999999999899999999986543 334678899999999999999999999999999999999


Q ss_pred             eccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEE---cCCCcEEEEeecCcc
Q 048419          407 DYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILL---DTYLNAKLGDFGLAK  483 (653)
Q Consensus       407 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~DfGla~  483 (653)
                      ||+++|+|.+++...... ...+++..++.++.|+++||.|||+   ++|+||||||+||++   +.++.+||+|||+++
T Consensus       100 e~~~~~~L~~~l~~~~~~-~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~  175 (285)
T 3is5_A          100 ETCEGGELLERIVSAQAR-GKALSEGYVAELMKQMMNALAYFHS---QHVVHKDLKPENILFQDTSPHSPIKIIDFGLAE  175 (285)
T ss_dssp             CCCSCCBHHHHHHHHHHH-TCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEESSSSTTCCEEECCCCCCC
T ss_pred             EeCCCCcHHHHHHhhhhc-ccCCCHHHHHHHHHHHHHHHHHHHh---CCEEECCCCHHHEEEecCCCCCCEEEEeeecce
Confidence            999999999998664321 3568999999999999999999999   899999999999999   556889999999998


Q ss_pred             cccCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHh
Q 048419          484 IYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQA  563 (653)
Q Consensus       484 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~  563 (653)
                      ......  ......||+.|+|||.+. ..++.++|||||||++|||++|+.||.........   ......  .      
T Consensus       176 ~~~~~~--~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~---~~~~~~--~------  241 (285)
T 3is5_A          176 LFKSDE--HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQ---QKATYK--E------  241 (285)
T ss_dssp             C------------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH---HHHHHC--C------
T ss_pred             ecCCcc--cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHH---hhhccC--C------
Confidence            654322  233457899999999886 56889999999999999999999999865432211   111100  0      


Q ss_pred             hhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          564 IDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       564 ~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                        .............+.+++.+||+.||.+|||+.|++++-
T Consensus       242 --~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp  280 (285)
T 3is5_A          242 --PNYAVECRPLTPQAVDLLKQMLTKDPERRPSAAQVLHHE  280 (285)
T ss_dssp             --CCCCC--CCCCHHHHHHHHHHTCSCTTTSCCHHHHHTSG
T ss_pred             --cccccccCcCCHHHHHHHHHHccCChhhCcCHHHHhcCH
Confidence              000000001235678999999999999999999999754

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=100.00  E-value=1e-40  Score=353.12  Aligned_cols=250  Identities=30%  Similarity=0.396  Sum_probs=204.7

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC---chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN---SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVY  406 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  406 (653)
                      +.|...+.||+|+||.||+|....+++.||||++...   .....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  133 (348)
T 1u5q_A           54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM  133 (348)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence            4578889999999999999999888999999999654   2334567899999999999999999999999999999999


Q ss_pred             eccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccccc
Q 048419          407 DYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE  486 (653)
Q Consensus       407 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~  486 (653)
                      ||++ |+|.+++...    ...+++.+++.++.|+++||.|||+   ++|+||||||+|||++.++.+||+|||+++...
T Consensus       134 e~~~-g~l~~~l~~~----~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~  205 (348)
T 1u5q_A          134 EYCL-GSASDLLEVH----KKPLQEVEIAAVTHGALQGLAYLHS---HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMA  205 (348)
T ss_dssp             ECCS-EEHHHHHHHH----TSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEEETTTEEEECCCTTCBSSS
T ss_pred             ecCC-CCHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEECCCCCEEEeeccCceecC
Confidence            9997 6888887543    2458999999999999999999999   899999999999999999999999999998654


Q ss_pred             CCCCCcccccccCCcccCccccc---cCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHh
Q 048419          487 HGANPQTTHIVGTLGYLAPELTR---TGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQA  563 (653)
Q Consensus       487 ~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~  563 (653)
                      .     .....||+.|+|||++.   ...++.++|||||||++|||++|+.||.........  ......     .    
T Consensus       206 ~-----~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~--~~~~~~-----~----  269 (348)
T 1u5q_A          206 P-----ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSAL--YHIAQN-----E----  269 (348)
T ss_dssp             S-----BCCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH--HHHHHS-----C----
T ss_pred             C-----CCcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHH--HHHHhc-----C----
Confidence            3     22357899999999984   567899999999999999999999999765432211  111110     0    


Q ss_pred             hhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          564 IDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       564 ~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                       .+.+  ........+.+++.+||+.||.+|||+.+++++..-
T Consensus       270 -~~~~--~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h~~~  309 (348)
T 1u5q_A          270 -SPAL--QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFV  309 (348)
T ss_dssp             -CCCC--CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHHH
T ss_pred             -CCCC--CCCCCCHHHHHHHHHHcccChhhCcCHHHHhhChhh
Confidence             0111  011123568899999999999999999999987654

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=100.00  E-value=5e-41  Score=351.21  Aligned_cols=272  Identities=22%  Similarity=0.353  Sum_probs=218.1

Q ss_pred             ccCHHHHHHhhcCcCcceeeeeeCcEEEEEEEeC-----CCCcEEEEEEeccC-chhhHHHHHHHHHHHhhcCCCceeee
Q 048419          319 RFKYAELASVTKGFGEQNLVGSGGFGRVYRGLMP-----SLGLEVAIKRIGHN-SQQGMKEFVAEIMSMGRLRHRNLVQL  392 (653)
Q Consensus       319 ~f~~~el~~at~~f~~~~~LG~G~fg~Vy~~~~~-----~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l  392 (653)
                      .+...+.....++|...+.||+|+||.||+|.+.     ..+..||||.+... .......+.+|+.++++++||||+++
T Consensus        14 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~   93 (322)
T 1p4o_A           14 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRL   93 (322)
T ss_dssp             CCCCCTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCE
T ss_pred             ccChhhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeee
Confidence            4455566667788999999999999999999875     34688999999654 33455678999999999999999999


Q ss_pred             eeeecccceeEEEEeccCCCCchhhhhccccc-----ccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEE
Q 048419          393 HGWCRKQDELLLVYDYVPNGSLDKLLFDKDHK-----LRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNIL  467 (653)
Q Consensus       393 ~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~-----~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIl  467 (653)
                      ++++.+.+..++||||+++|+|.+++......     ....+++..+++++.||+.||.|||+   ++|+||||||+||+
T Consensus        94 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~NIl  170 (322)
T 1p4o_A           94 LGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCM  170 (322)
T ss_dssp             EEEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCSGGGEE
T ss_pred             EEEEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHH---CCCccCCCccceEE
Confidence            99999999999999999999999999764321     01346889999999999999999999   89999999999999


Q ss_pred             EcCCCcEEEEeecCcccccCCCC-CcccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHH
Q 048419          468 LDTYLNAKLGDFGLAKIYEHGAN-PQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAEL  545 (653)
Q Consensus       468 l~~~~~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~  545 (653)
                      ++.++.+||+|||+++....... .......+|+.|+|||.+.+..++.++|||||||++|||++ |+.||.......  
T Consensus       171 i~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~--  248 (322)
T 1p4o_A          171 VAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ--  248 (322)
T ss_dssp             ECTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHH--
T ss_pred             EcCCCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHH--
Confidence            99999999999999986543221 12233456889999999998899999999999999999999 889987654321  


Q ss_pred             HHHHHHHhhhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcCCC
Q 048419          546 LLVDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLGDS  608 (653)
Q Consensus       546 ~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  608 (653)
                       +...+..    +.        +..........+.+++.+||+.||.+|||+.|++++|+...
T Consensus       249 -~~~~~~~----~~--------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~  298 (322)
T 1p4o_A          249 -VLRFVME----GG--------LLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEM  298 (322)
T ss_dssp             -HHHHHHT----TC--------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGS
T ss_pred             -HHHHHHc----CC--------cCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhh
Confidence             1111111    11        11111223466889999999999999999999999998753

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=100.00  E-value=1.5e-40  Score=340.74  Aligned_cols=256  Identities=22%  Similarity=0.325  Sum_probs=203.9

Q ss_pred             hhcCcCcceeeeeeCcEEEEEEEeCC---CCcEEEEEEeccC-chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeE
Q 048419          328 VTKGFGEQNLVGSGGFGRVYRGLMPS---LGLEVAIKRIGHN-SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELL  403 (653)
Q Consensus       328 at~~f~~~~~LG~G~fg~Vy~~~~~~---~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~  403 (653)
                      ..++|...+.||+|+||.||+|.+..   .+..||||.+... .....+.+.+|+.++++++||||+++++++.+. ..+
T Consensus        10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~~~   88 (281)
T 3cc6_A           10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE-PTW   88 (281)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS-SCE
T ss_pred             cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCC-CCE
Confidence            34678889999999999999998643   3456999999765 344567899999999999999999999998654 568


Q ss_pred             EEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcc
Q 048419          404 LVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK  483 (653)
Q Consensus       404 lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~  483 (653)
                      +||||+++++|.+++....    ..+++..++.++.|+++||.|||+   ++|+||||||+||+++.++.+||+|||++.
T Consensus        89 ~v~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~  161 (281)
T 3cc6_A           89 IIMELYPYGELGHYLERNK----NSLKVLTLVLYSLQICKAMAYLES---INCVHRDIAVRNILVASPECVKLGDFGLSR  161 (281)
T ss_dssp             EEEECCTTCBHHHHHHHHT----TTCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEEEETTEEEECCCCGGG
T ss_pred             EEEecCCCCCHHHHHHhcc----ccCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCccceEEECCCCcEEeCccCCCc
Confidence            9999999999999997642    348899999999999999999999   999999999999999999999999999998


Q ss_pred             cccCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhhcccchhH
Q 048419          484 IYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELHLEGEITQ  562 (653)
Q Consensus       484 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~  562 (653)
                      ..............+++.|+|||.+.+..++.++||||||+++|||++ |+.||........   ...+.....      
T Consensus       162 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~---~~~~~~~~~------  232 (281)
T 3cc6_A          162 YIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDV---IGVLEKGDR------  232 (281)
T ss_dssp             CC---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGH---HHHHHHTCC------
T ss_pred             ccccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHH---HHHHhcCCC------
Confidence            765443333344567889999999998899999999999999999998 9999975443221   111111000      


Q ss_pred             hhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          563 AIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       563 ~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                            ...+......+.+++.+||+.||.+||++.|++++|+.
T Consensus       233 ------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~  270 (281)
T 3cc6_A          233 ------LPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSD  270 (281)
T ss_dssp             ------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             ------CCCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHH
Confidence                  00111224568899999999999999999999999864

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=100.00  E-value=2.3e-40  Score=347.44  Aligned_cols=251  Identities=24%  Similarity=0.314  Sum_probs=197.3

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeC---CCCcEEEEEEeccCc----hhhHHHHHHHHHHHhhcCCCceeeeeeeeccccee
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMP---SLGLEVAIKRIGHNS----QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDEL  402 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~---~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~  402 (653)
                      ++|...+.||+|+||.||+++..   .+++.||||++....    ......+.+|+.++++++||||+++++++...+.+
T Consensus        17 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~   96 (327)
T 3a62_A           17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKL   96 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSCE
T ss_pred             HHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCEE
Confidence            57889999999999999999974   578999999997542    23445678999999999999999999999999999


Q ss_pred             EEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCc
Q 048419          403 LLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLA  482 (653)
Q Consensus       403 ~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla  482 (653)
                      ++||||+++++|.+++...     ..+++..++.++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||++
T Consensus        97 ~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~  168 (327)
T 3a62_A           97 YLILEYLSGGELFMQLERE-----GIFMEDTACFYLAEISMALGHLHQ---KGIIYRDLKPENIMLNHQGHVKLTDFGLC  168 (327)
T ss_dssp             EEEEECCTTEEHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCTTTEEECTTSCEEECCCSCC
T ss_pred             EEEEeCCCCCcHHHHHHhC-----CCCCHHHHHHHHHHHHHHHHHHHh---CCEEcccCCHHHeEECCCCcEEEEeCCcc
Confidence            9999999999999999653     348889999999999999999999   89999999999999999999999999999


Q ss_pred             ccccCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhH
Q 048419          483 KIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQ  562 (653)
Q Consensus       483 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~  562 (653)
                      +...... .......||+.|+|||.+.+..++.++|||||||++|||++|+.||........   .+.+...        
T Consensus       169 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~---~~~i~~~--------  236 (327)
T 3a62_A          169 KESIHDG-TVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKT---IDKILKC--------  236 (327)
T ss_dssp             -----------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH---HHHHHHT--------
T ss_pred             cccccCC-ccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHH---HHHHHhC--------
Confidence            7543221 122345799999999999988999999999999999999999999986543221   1111110        


Q ss_pred             hhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCC-----CHHHHHHHHc
Q 048419          563 AIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRP-----DMRRVVEFLL  605 (653)
Q Consensus       563 ~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~L~  605 (653)
                          .+ ..+......+.+++.+||+.||.+||     ++.|++++-.
T Consensus       237 ----~~-~~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~hp~  279 (327)
T 3a62_A          237 ----KL-NLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPF  279 (327)
T ss_dssp             ----CC-CCCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHSGG
T ss_pred             ----CC-CCCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcCCc
Confidence                00 01112245688999999999999999     8889988654

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=100.00  E-value=2e-40  Score=339.36  Aligned_cols=254  Identities=26%  Similarity=0.389  Sum_probs=207.1

Q ss_pred             hcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEec
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDY  408 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~  408 (653)
                      .++|...+.||+|+||.||+|.+. ++..||||.+.... ...+.+.+|++++++++||||+++++++.+ +..++||||
T Consensus        12 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~   88 (279)
T 1qpc_A           12 RETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEY   88 (279)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEEC
T ss_pred             HHhhhheeeecCCCCeEEEEEEEc-CCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEEEEec
Confidence            367888999999999999999986 46789999996543 345788999999999999999999999864 458999999


Q ss_pred             cCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCC
Q 048419          409 VPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHG  488 (653)
Q Consensus       409 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~  488 (653)
                      +++++|.+++....   ...+++.+++.++.|++.||.|||+   ++|+||||||+||++++++.+||+|||++......
T Consensus        89 ~~~~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~  162 (279)
T 1qpc_A           89 MENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDN  162 (279)
T ss_dssp             CTTCBHHHHTTSHH---HHTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTCEECSSS
T ss_pred             CCCCCHHHHHhcCC---CCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHhhEEEcCCCCEEECCCcccccccCc
Confidence            99999999997643   2358999999999999999999999   89999999999999999999999999999876543


Q ss_pred             CCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhc
Q 048419          489 ANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQT  567 (653)
Q Consensus       489 ~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~  567 (653)
                      .........++..|+|||.+.+..++.++||||||+++|||++ |+.||.......   +...+.....           
T Consensus       163 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~---~~~~~~~~~~-----------  228 (279)
T 1qpc_A          163 EYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE---VIQNLERGYR-----------  228 (279)
T ss_dssp             CEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH---HHHHHHTTCC-----------
T ss_pred             ccccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHH---HHHHHhcccC-----------
Confidence            3223333456789999999988889999999999999999999 899997644322   1111111100           


Q ss_pred             cCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          568 LDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       568 l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                       ...+......+.+++.+||+.||.+|||+.++++.|+.
T Consensus       229 -~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~  266 (279)
T 1qpc_A          229 -MVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLED  266 (279)
T ss_dssp             -CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             -CCCcccccHHHHHHHHHHhccChhhCCCHHHHHHHHHH
Confidence             01111234678899999999999999999999998864

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=100.00  E-value=4.7e-40  Score=347.71  Aligned_cols=265  Identities=18%  Similarity=0.200  Sum_probs=201.4

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCC---CCcEEEEEEeccCchhh-----------HHHHHHHHHHHhhcCCCceeeeeee
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPS---LGLEVAIKRIGHNSQQG-----------MKEFVAEIMSMGRLRHRNLVQLHGW  395 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~---~~~~vavK~~~~~~~~~-----------~~~~~~E~~~l~~l~H~niv~l~g~  395 (653)
                      ++|...+.||+|+||.||+|.+..   .+..+|||++.......           .+.+.+|+..++.++||||++++++
T Consensus        37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~  116 (345)
T 2v62_A           37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS  116 (345)
T ss_dssp             CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred             ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence            578889999999999999999976   68899999986553221           1246678899999999999999999


Q ss_pred             ecc----cceeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCC
Q 048419          396 CRK----QDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTY  471 (653)
Q Consensus       396 ~~~----~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~  471 (653)
                      +..    ....++||||+ +++|.+++....     .+++.+++.++.||+.||.|||+   ++|+||||||+|||++.+
T Consensus       117 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~-----~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~  187 (345)
T 2v62_A          117 GLTEFKGRSYRFMVMERL-GIDLQKISGQNG-----TFKKSTVLQLGIRMLDVLEYIHE---NEYVHGDIKAANLLLGYK  187 (345)
T ss_dssp             EEEESSSCEEEEEEEECE-EEEHHHHCBGGG-----BCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEESS
T ss_pred             cccccCCCcEEEEEEecc-CCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCcCHHHEEEccC
Confidence            987    67899999999 999999997643     58999999999999999999999   899999999999999888


Q ss_pred             C--cEEEEeecCcccccCCCC------CcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhh
Q 048419          472 L--NAKLGDFGLAKIYEHGAN------PQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAA  543 (653)
Q Consensus       472 ~--~~kl~DfGla~~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~  543 (653)
                      +  .+||+|||+++.+.....      .......||+.|+|||.+.+..++.++|||||||++|||++|+.||.......
T Consensus       188 ~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~  267 (345)
T 2v62_A          188 NPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDP  267 (345)
T ss_dssp             STTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCH
T ss_pred             CCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCcccccccc
Confidence            7  999999999987643211      11234579999999999999899999999999999999999999996532221


Q ss_pred             HHHHHHHHHhhhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcCCC
Q 048419          544 ELLLVDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLGDS  608 (653)
Q Consensus       544 ~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  608 (653)
                      ... . ...... ...+...+.....  .......+.+++.+||+.||.+||++.+|++.|+...
T Consensus       268 ~~~-~-~~~~~~-~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~  327 (345)
T 2v62_A          268 VAV-Q-TAKTNL-LDELPQSVLKWAP--SGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHG  327 (345)
T ss_dssp             HHH-H-HHHHHH-HHTTTHHHHHHSC--TTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTC
T ss_pred             HHH-H-HHHHhh-cccccHHHHhhcc--ccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccC
Confidence            111 1 111110 1111111111110  0022457899999999999999999999999998754

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=100.00  E-value=6.6e-40  Score=338.18  Aligned_cols=261  Identities=21%  Similarity=0.284  Sum_probs=206.0

Q ss_pred             hhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeee-cccceeEEEE
Q 048419          328 VTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWC-RKQDELLLVY  406 (653)
Q Consensus       328 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~-~~~~~~~lV~  406 (653)
                      ..++|...+.||+|+||.||+|.+..+++.||||++.....  .+.+.+|+.++++++|+++++.+.++ ...+..++||
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~   84 (296)
T 3uzp_A            7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM   84 (296)
T ss_dssp             ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS--CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred             eccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc--hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEE
Confidence            35789999999999999999999988899999999865432  24688999999999998877766666 5556789999


Q ss_pred             eccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEE---cCCCcEEEEeecCcc
Q 048419          407 DYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILL---DTYLNAKLGDFGLAK  483 (653)
Q Consensus       407 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~DfGla~  483 (653)
                      ||+ +++|.+++....    ..+++.+++.++.||+.||+|||+   ++|+||||||+|||+   +.++.+||+|||+++
T Consensus        85 e~~-~~~L~~~~~~~~----~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~  156 (296)
T 3uzp_A           85 ELL-GPSLEDLFNFCS----RKFSLKTVLLLADQMISRIEYIHS---KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK  156 (296)
T ss_dssp             ECC-CCBHHHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECCGGGTTCEEECCCTTCE
T ss_pred             Eec-CCCHHHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHeEEecCCCCCeEEEeeCCCcc
Confidence            999 899999997432    358999999999999999999999   899999999999999   588999999999998


Q ss_pred             cccCCCCC------cccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcc
Q 048419          484 IYEHGANP------QTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLE  557 (653)
Q Consensus       484 ~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~  557 (653)
                      ........      ......||+.|+|||.+.+..++.++|||||||++|||++|+.||..............+......
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~  236 (296)
T 3uzp_A          157 KYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMS  236 (296)
T ss_dssp             ECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHH
T ss_pred             cccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccC
Confidence            76543321      124457999999999999999999999999999999999999999864322111111111111101


Q ss_pred             cchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          558 GEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       558 ~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                      ..... +.   .    .....+.+++.+||+.||.+||++.+|++.|+.
T Consensus       237 ~~~~~-~~---~----~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~  277 (296)
T 3uzp_A          237 TPIEV-LC---K----GYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRN  277 (296)
T ss_dssp             SCHHH-HT---T----TSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHH
T ss_pred             CchHH-HH---h----hCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHH
Confidence            11000 00   1    123568899999999999999999999998864

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=8.4e-41  Score=359.26  Aligned_cols=266  Identities=25%  Similarity=0.363  Sum_probs=197.9

Q ss_pred             HhhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC--chhhHHHHHHHHHHHhhcC-CCceeeeeeeecccc--e
Q 048419          327 SVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLR-HRNLVQLHGWCRKQD--E  401 (653)
Q Consensus       327 ~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~--~  401 (653)
                      ...++|...+.||+|+||.||+|.+..+++.||||++...  .....+.+.+|+.+++++. ||||+++++++...+  .
T Consensus         6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~   85 (388)
T 3oz6_A            6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRD   85 (388)
T ss_dssp             HHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSC
T ss_pred             cccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCE
Confidence            4567899999999999999999999999999999998543  3445677889999999997 999999999986544  6


Q ss_pred             eEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecC
Q 048419          402 LLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGL  481 (653)
Q Consensus       402 ~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl  481 (653)
                      +++|||||+ ++|..++...      .+++..+..++.||+.||+|||+   ++|+||||||+|||++.++.+||+|||+
T Consensus        86 ~~lv~e~~~-~~L~~~~~~~------~~~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~  155 (388)
T 3oz6_A           86 VYLVFDYME-TDLHAVIRAN------ILEPVHKQYVVYQLIKVIKYLHS---GGLLHRDMKPSNILLNAECHVKVADFGL  155 (388)
T ss_dssp             EEEEEECCS-EEHHHHHHHT------CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred             EEEEecccC-cCHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCCCHHHeEEcCCCCEEecCCcc
Confidence            899999997 5898888643      48889999999999999999999   8999999999999999999999999999


Q ss_pred             cccccCC--------------------CCCcccccccCCcccCcccccc-CCCCCccceeehHHHHHHHHhCCCCCChhh
Q 048419          482 AKIYEHG--------------------ANPQTTHIVGTLGYLAPELTRT-GKATTSTDVYSYGILMLEVACGRRSIEPQK  540 (653)
Q Consensus       482 a~~~~~~--------------------~~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDV~s~Gvvl~elltG~~p~~~~~  540 (653)
                      ++.....                    .........||+.|+|||++.+ ..++.++|||||||++|||++|+.||....
T Consensus       156 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~  235 (388)
T 3oz6_A          156 SRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSS  235 (388)
T ss_dssp             CEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred             cccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCC
Confidence            9865321                    1112334579999999999876 678999999999999999999999998665


Q ss_pred             hhhHHHHHHHHHhhhcccch-----------hHhhh---h-------ccCcC-------------CHHHHHHHHHHHHHc
Q 048419          541 AAAELLLVDWVKELHLEGEI-----------TQAID---Q-------TLDYY-------------DLAEAELVLNLGLFC  586 (653)
Q Consensus       541 ~~~~~~l~~~~~~~~~~~~~-----------~~~~d---~-------~l~~~-------------~~~~~~~l~~l~~~C  586 (653)
                      ........  +. .......           ...+.   .       .....             .......+.+|+.+|
T Consensus       236 ~~~~~~~i--~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~  312 (388)
T 3oz6_A          236 TMNQLERI--IG-VIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKL  312 (388)
T ss_dssp             HHHHHHHH--HH-HHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHH
T ss_pred             HHHHHHHH--HH-hcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHh
Confidence            43322111  11 0000000           00000   0       00000             001235688999999


Q ss_pred             CCCCCCCCCCHHHHHHHHc
Q 048419          587 SAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       587 l~~dP~~RPs~~evl~~L~  605 (653)
                      |+.||.+|||+.|++++-.
T Consensus       313 L~~dP~~R~t~~e~l~Hp~  331 (388)
T 3oz6_A          313 LQFNPNKRISANDALKHPF  331 (388)
T ss_dssp             CCSSGGGSCCHHHHTTSTT
T ss_pred             hccCcccCCCHHHHhCCHH
Confidence            9999999999999998753

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=100.00  E-value=7e-41  Score=350.92  Aligned_cols=267  Identities=22%  Similarity=0.301  Sum_probs=200.3

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhh-HHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEec
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQG-MKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDY  408 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~  408 (653)
                      ++|...+.||+|+||.||+|.+..+++.||||++....... ...+.+|+.++++++||||+++++++...+..++||||
T Consensus         2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (324)
T 3mtl_A            2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY   81 (324)
T ss_dssp             CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence            46888999999999999999999889999999996543221 22456799999999999999999999999999999999


Q ss_pred             cCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCC
Q 048419          409 VPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHG  488 (653)
Q Consensus       409 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~  488 (653)
                      ++ |+|.+++....    ..+++..++.++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+++.....
T Consensus        82 ~~-~~l~~~~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~  153 (324)
T 3mtl_A           82 LD-KDLKQYLDDCG----NIINMHNVKLFLFQLLRGLAYCHR---QKVLHRDLKPQNLLINERGELKLADFGLARAKSIP  153 (324)
T ss_dssp             CS-EEHHHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHH---TTEEESSCCGGGEEECTTCCEEECSSSEEECC---
T ss_pred             cc-cCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCcCHHHEEECCCCCEEEccCcccccccCC
Confidence            97 58988887643    458899999999999999999999   89999999999999999999999999999865432


Q ss_pred             CCCcccccccCCcccCcccccc-CCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhh-
Q 048419          489 ANPQTTHIVGTLGYLAPELTRT-GKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQ-  566 (653)
Q Consensus       489 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~-  566 (653)
                      . .......||+.|+|||.+.+ ..++.++|||||||++|||++|+.||......+....................... 
T Consensus       154 ~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  232 (324)
T 3mtl_A          154 T-KTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNE  232 (324)
T ss_dssp             ----------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCH
T ss_pred             c-cccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcch
Confidence            2 22234568999999999876 56899999999999999999999999876544322211111111111111111000 


Q ss_pred             --------ccCcC-----CHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          567 --------TLDYY-----DLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       567 --------~l~~~-----~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                              .....     .......+.+|+.+||+.||.+|||+.|++++-.
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~  284 (324)
T 3mtl_A          233 EFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPF  284 (324)
T ss_dssp             HHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGG
T ss_pred             hhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChh
Confidence                    00000     0112356889999999999999999999998654

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=100.00  E-value=3.8e-40  Score=342.63  Aligned_cols=252  Identities=28%  Similarity=0.440  Sum_probs=197.5

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEecc
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYV  409 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~  409 (653)
                      ++|+..+.||+|+||.||+|.+.  ++.||||++...  ...+.+.+|++++++++||||+++++++.+  ..++||||+
T Consensus         8 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e~~   81 (307)
T 2eva_A            8 KEIEVEEVVGRGAFGVVCKAKWR--AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEYA   81 (307)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEET--TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEECC
T ss_pred             hHeeeeeEeecCCCceEEEEEEC--CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEEcC
Confidence            46788899999999999999985  688999998543  345789999999999999999999999874  479999999


Q ss_pred             CCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCc-EEEEeecCcccccCC
Q 048419          410 PNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLN-AKLGDFGLAKIYEHG  488 (653)
Q Consensus       410 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~-~kl~DfGla~~~~~~  488 (653)
                      ++|+|.+++.....  ...+++..++.++.|+++||.|||+...++|+||||||+|||++.++. +||+|||++......
T Consensus        82 ~~~~L~~~l~~~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~  159 (307)
T 2eva_A           82 EGGSLYNVLHGAEP--LPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH  159 (307)
T ss_dssp             TTCBHHHHHHCSSS--EECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC-------
T ss_pred             CCCCHHHHHhccCC--CCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc
Confidence            99999999976542  235788899999999999999999865568999999999999998886 799999999765332


Q ss_pred             CCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhcc
Q 048419          489 ANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTL  568 (653)
Q Consensus       489 ~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l  568 (653)
                          .....||+.|+|||.+.+..++.++|||||||++|||++|+.||......... .. +...   .+..     +  
T Consensus       160 ----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~-~~-~~~~---~~~~-----~--  223 (307)
T 2eva_A          160 ----MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFR-IM-WAVH---NGTR-----P--  223 (307)
T ss_dssp             ---------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHH-HH-HHHH---TTCC-----C--
T ss_pred             ----cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHH-HH-HHHh---cCCC-----C--
Confidence                22346899999999999989999999999999999999999999754322111 10 1100   0000     0  


Q ss_pred             CcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          569 DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       569 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                       .........+.+++.+||+.||.+|||+.|++++|+.
T Consensus       224 -~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~  260 (307)
T 2eva_A          224 -PLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTH  260 (307)
T ss_dssp             -CCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             -CcccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHH
Confidence             0111123568899999999999999999999999864

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=100.00  E-value=2.1e-40  Score=369.27  Aligned_cols=255  Identities=26%  Similarity=0.353  Sum_probs=211.1

Q ss_pred             hcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC---chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEE
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN---SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLV  405 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV  405 (653)
                      .++|...++||+|+||.||+|.+..+|+.||||++...   .......+.+|+.++++++||||+++++++.+.+.+++|
T Consensus       183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV  262 (576)
T 2acx_A          183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV  262 (576)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence            45689999999999999999999989999999999653   223456788999999999999999999999999999999


Q ss_pred             EeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccc
Q 048419          406 YDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIY  485 (653)
Q Consensus       406 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~  485 (653)
                      |||+++|+|.+++....   ...+++..++.++.||+.||.|||+   ++|+||||||+||||+.++.+||+|||+++..
T Consensus       263 mEy~~gg~L~~~l~~~~---~~~l~e~~~~~i~~qIl~aL~yLH~---~gIvHrDLKPeNILld~~g~vKL~DFGla~~~  336 (576)
T 2acx_A          263 LTLMNGGDLKFHIYHMG---QAGFPEARAVFYAAEICCGLEDLHR---ERIVYRDLKPENILLDDHGHIRISDLGLAVHV  336 (576)
T ss_dssp             ECCCCSCBHHHHHHSSS---SCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred             EEcCCCCcHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHH---CCEeccCCchheEEEeCCCCeEEEecccceec
Confidence            99999999999997654   3458999999999999999999999   89999999999999999999999999999876


Q ss_pred             cCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhH-HHHHHHHHhhhcccchhHhh
Q 048419          486 EHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAE-LLLVDWVKELHLEGEITQAI  564 (653)
Q Consensus       486 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~  564 (653)
                      ....  ......||+.|+|||++.+..++.++|||||||++|||++|+.||........ ..+...+..           
T Consensus       337 ~~~~--~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~-----------  403 (576)
T 2acx_A          337 PEGQ--TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKE-----------  403 (576)
T ss_dssp             CTTC--CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHH-----------
T ss_pred             ccCc--cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhc-----------
Confidence            4332  23345899999999999988999999999999999999999999986432111 111111111           


Q ss_pred             hhccCcCCHHHHHHHHHHHHHcCCCCCCCCC-----CHHHHHHHH
Q 048419          565 DQTLDYYDLAEAELVLNLGLFCSAPNPVYRP-----DMRRVVEFL  604 (653)
Q Consensus       565 d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~L  604 (653)
                        ....++......+.+|+.+||+.||.+||     ++.||+++-
T Consensus       404 --~~~~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~Hp  446 (576)
T 2acx_A          404 --VPEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHP  446 (576)
T ss_dssp             --CCCCCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTSG
T ss_pred             --ccccCCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhCh
Confidence              00111222346788999999999999999     789998764

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=100.00  E-value=1.6e-40  Score=342.19  Aligned_cols=257  Identities=25%  Similarity=0.408  Sum_probs=196.4

Q ss_pred             hcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC--chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEE
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVY  406 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  406 (653)
                      .++|...+.||+|+||.||+|.+..   .||||++...  .....+.+.+|+.++++++|+||+++++++ ..+..++||
T Consensus        23 ~~~y~~~~~lG~G~~g~Vy~~~~~~---~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~   98 (289)
T 3og7_A           23 DGQITVGQRIGSGSFGTVYKGKWHG---DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVT   98 (289)
T ss_dssp             TTSCEEEEEEEECSSEEEEEEESSS---EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEE
T ss_pred             ccceeeeeEecCCCCeEEEEEEEcC---ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEE
Confidence            4678889999999999999998753   5999998654  345567899999999999999999999976 445689999


Q ss_pred             eccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccccc
Q 048419          407 DYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE  486 (653)
Q Consensus       407 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~  486 (653)
                      ||+++++|.+++....    ..+++.+++.++.|++.||.|||+   ++|+||||||+|||++.++.+||+|||+++...
T Consensus        99 e~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~~L~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~  171 (289)
T 3og7_A           99 QWCEGSSLYHHLHASE----TKFEMKKLIDIARQTARGMDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKS  171 (289)
T ss_dssp             ECCCEEEHHHHHTTC-------CCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEETTTEEEECCCC------
T ss_pred             EecCCCcHHHHHhhcc----CCCCHHHHHHHHHHHHHHHHHHHh---CCcccccCccceEEECCCCCEEEccceeccccc
Confidence            9999999999996543    458999999999999999999999   899999999999999999999999999998654


Q ss_pred             CCC-CCcccccccCCcccCccccc---cCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhH
Q 048419          487 HGA-NPQTTHIVGTLGYLAPELTR---TGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQ  562 (653)
Q Consensus       487 ~~~-~~~~~~~~gt~~y~aPE~~~---~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~  562 (653)
                      ... ........||+.|+|||.+.   +..++.++||||||+++|||++|+.||........  +.+.+......     
T Consensus       172 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~--~~~~~~~~~~~-----  244 (289)
T 3og7_A          172 RWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ--IIEMVGRGSLS-----  244 (289)
T ss_dssp             ------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHH--HHHHHHHTSCC-----
T ss_pred             cccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHH--HHHHhcccccC-----
Confidence            321 22233457899999999986   56688899999999999999999999976543221  11222111111     


Q ss_pred             hhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          563 AIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       563 ~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                         +.+..........+.+++.+||+.||.+|||+.|+++.|+.
T Consensus       245 ---~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~  285 (289)
T 3og7_A          245 ---PDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEE  285 (289)
T ss_dssp             ---CCTTSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             ---cchhhccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHH
Confidence               11111122335678999999999999999999999999975

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=100.00  E-value=2.6e-40  Score=363.23  Aligned_cols=249  Identities=24%  Similarity=0.415  Sum_probs=207.6

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc---hhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS---QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVY  406 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  406 (653)
                      ++|...+.||+|+||.||+|.+..+|+.||||++....   ....+.+.+|+.+++.++||||+++++++...+..++||
T Consensus        16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~   95 (476)
T 2y94_A           16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVM   95 (476)
T ss_dssp             TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence            56888999999999999999999899999999996432   234567899999999999999999999999999999999


Q ss_pred             eccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccccc
Q 048419          407 DYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE  486 (653)
Q Consensus       407 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~  486 (653)
                      ||+++|+|.+++...     ..+++.+++.++.||+.||.|||+   ++|+||||||+|||++.++++||+|||+++...
T Consensus        96 E~~~gg~L~~~l~~~-----~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~  167 (476)
T 2y94_A           96 EYVSGGELFDYICKN-----GRLDEKESRRLFQQILSGVDYCHR---HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMS  167 (476)
T ss_dssp             ECCSSEEHHHHTTSS-----SSCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCSGGGEEECTTCCEEECCCSSCEECC
T ss_pred             eCCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCCCcccccHHHEEEecCCCeEEEeccchhhcc
Confidence            999999999999754     348999999999999999999999   899999999999999999999999999998765


Q ss_pred             CCCCCcccccccCCcccCccccccCCC-CCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhh
Q 048419          487 HGANPQTTHIVGTLGYLAPELTRTGKA-TTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAID  565 (653)
Q Consensus       487 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d  565 (653)
                      ...  ......||+.|+|||++.+..+ +.++|||||||++|||++|+.||.......   +...+..    +.      
T Consensus       168 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~---~~~~i~~----~~------  232 (476)
T 2y94_A          168 DGE--FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPT---LFKKICD----GI------  232 (476)
T ss_dssp             TTC--CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHH---HHHHHHT----TC------
T ss_pred             ccc--cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHH---HHHHHhc----CC------
Confidence            432  2334579999999999988765 689999999999999999999998654321   1111111    10      


Q ss_pred             hccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          566 QTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       566 ~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                        . ..+......+.+|+.+||+.||.+|||+.|++++-
T Consensus       233 --~-~~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~hp  268 (476)
T 2y94_A          233 --F-YTPQYLNPSVISLLKHMLQVDPMKRATIKDIREHE  268 (476)
T ss_dssp             --C-CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTCH
T ss_pred             --c-CCCccCCHHHHHHHHHHcCCCchhCcCHHHHHhCH
Confidence              0 01111235688999999999999999999999854

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=100.00  E-value=1.1e-40  Score=350.38  Aligned_cols=264  Identities=25%  Similarity=0.358  Sum_probs=211.7

Q ss_pred             HHhhcCcCcceeeeeeCcEEEEEEEeCCCCc-----EEEEEEeccC-chhhHHHHHHHHHHHhhc-CCCceeeeeeeecc
Q 048419          326 ASVTKGFGEQNLVGSGGFGRVYRGLMPSLGL-----EVAIKRIGHN-SQQGMKEFVAEIMSMGRL-RHRNLVQLHGWCRK  398 (653)
Q Consensus       326 ~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~-----~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~  398 (653)
                      ....++|...+.||+|+||.||+|.+..++.     .||+|.+... .....+.+.+|+.+++++ +||||++++++|..
T Consensus        42 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~  121 (333)
T 2i1m_A           42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTH  121 (333)
T ss_dssp             BCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             cCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEec
Confidence            3345788999999999999999999876553     7999999755 334567899999999999 89999999999999


Q ss_pred             cceeEEEEeccCCCCchhhhhccccc---------ccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEc
Q 048419          399 QDELLLVYDYVPNGSLDKLLFDKDHK---------LRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLD  469 (653)
Q Consensus       399 ~~~~~lV~E~~~~gsL~~~l~~~~~~---------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~  469 (653)
                      .+..++||||+++|+|.+++......         ....+++..++.++.||+.||.|||+   ++|+||||||+|||++
T Consensus       122 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~NIl~~  198 (333)
T 2i1m_A          122 GGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLAS---KNCIHRDVAARNVLLT  198 (333)
T ss_dssp             SSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGCEEE
T ss_pred             CCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhc---CCcccCCcccceEEEC
Confidence            99999999999999999999764321         02347899999999999999999999   8999999999999999


Q ss_pred             CCCcEEEEeecCcccccCCCCC-cccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHH
Q 048419          470 TYLNAKLGDFGLAKIYEHGANP-QTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLL  547 (653)
Q Consensus       470 ~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l  547 (653)
                      .++.+||+|||+++........ ......+|+.|+|||.+.+..++.++|||||||++|||++ |..||........  +
T Consensus       199 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~--~  276 (333)
T 2i1m_A          199 NGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSK--F  276 (333)
T ss_dssp             GGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHH--H
T ss_pred             CCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHH--H
Confidence            9999999999999866443222 2233457889999999998899999999999999999999 8899875433211  1


Q ss_pred             HHHHHhhhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          548 VDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       548 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                      ...+.....            ...+......+.+++.+||+.||.+|||+.||+++|+.
T Consensus       277 ~~~~~~~~~------------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~  323 (333)
T 2i1m_A          277 YKLVKDGYQ------------MAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQE  323 (333)
T ss_dssp             HHHHHHTCC------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHHhcCCC------------CCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHH
Confidence            111111100            00111124678899999999999999999999999864

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=100.00  E-value=1.2e-40  Score=354.58  Aligned_cols=255  Identities=21%  Similarity=0.269  Sum_probs=196.9

Q ss_pred             hcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEec
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDY  408 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~  408 (653)
                      .++|...+.||+|+||.||++....+++.||||++..... ..+.+.+|+.++++++||||+++++++.+.+..++||||
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~   97 (361)
T 3uc3_A           19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEY   97 (361)
T ss_dssp             TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEe
Confidence            4679999999999999999999998999999999965432 235688999999999999999999999999999999999


Q ss_pred             cCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCc--EEEEeecCccccc
Q 048419          409 VPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLN--AKLGDFGLAKIYE  486 (653)
Q Consensus       409 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~--~kl~DfGla~~~~  486 (653)
                      +++|+|.+++...     ..+++..++.++.||+.||.|||+   ++|+||||||+|||++.++.  +||+|||+++...
T Consensus        98 ~~~~~L~~~l~~~-----~~~~~~~~~~i~~ql~~~L~~LH~---~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~  169 (361)
T 3uc3_A           98 ASGGELYERICNA-----GRFSEDEARFFFQQLLSGVSYCHS---MQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSV  169 (361)
T ss_dssp             CCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTCCSCCCCGGGEEECSSSSCCEEECCCCCC----
T ss_pred             CCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEcCCCCceEEEeecCcccccc
Confidence            9999999998653     348999999999999999999999   99999999999999987765  9999999997533


Q ss_pred             CCCCCcccccccCCcccCccccccCCCCCc-cceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhh
Q 048419          487 HGANPQTTHIVGTLGYLAPELTRTGKATTS-TDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAID  565 (653)
Q Consensus       487 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k-sDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d  565 (653)
                      ..  .......||+.|+|||++.+..++.+ +|||||||++|||++|+.||.........  ...+...         ..
T Consensus       170 ~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~--~~~~~~~---------~~  236 (361)
T 3uc3_A          170 LH--SQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDY--RKTIQRI---------LS  236 (361)
T ss_dssp             -------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCH--HHHHHHH---------HT
T ss_pred             cc--CCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHH--HHHHHHH---------hc
Confidence            22  22234579999999999988877665 89999999999999999999864432111  1111110         00


Q ss_pred             hccC-cCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          566 QTLD-YYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       566 ~~l~-~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                      .... .........+.+|+.+||+.||.+|||+.|++++-.
T Consensus       237 ~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~  277 (361)
T 3uc3_A          237 VKYSIPDDIRISPECCHLISRIFVADPATRISIPEIKTHSW  277 (361)
T ss_dssp             TCCCCCTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTSHH
T ss_pred             CCCCCCCcCCCCHHHHHHHHHHccCChhHCcCHHHHHhCcc
Confidence            0000 000112356889999999999999999999998654

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=100.00  E-value=1.1e-40  Score=349.68  Aligned_cols=266  Identities=22%  Similarity=0.327  Sum_probs=209.3

Q ss_pred             cCcCcceeeeeeCcEEEEEEE----eCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccc--eeE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGL----MPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQD--ELL  403 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~----~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~--~~~  403 (653)
                      ++|...+.||+|+||.||+|.    ...+++.||||++........+.+.+|++++++++||||+++++++...+  ..+
T Consensus        41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~  120 (326)
T 2w1i_A           41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK  120 (326)
T ss_dssp             GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCE
T ss_pred             HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceE
Confidence            567889999999999999998    35578999999998777777788999999999999999999999987654  689


Q ss_pred             EEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcc
Q 048419          404 LVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK  483 (653)
Q Consensus       404 lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~  483 (653)
                      +||||+++++|.+++....    ..+++.+++.++.||++||.|||+   ++|+||||||+||+++.++.+||+|||+++
T Consensus       121 lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dikp~NIli~~~~~~kL~Dfg~~~  193 (326)
T 2w1i_A          121 LIMEYLPYGSLRDYLQKHK----ERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDFGLTK  193 (326)
T ss_dssp             EEECCCTTCBHHHHHHHST----TSSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEEEETTEEEECCCTTCE
T ss_pred             EEEECCCCCCHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHh---CCEeccCCCcceEEEcCCCcEEEecCcchh
Confidence            9999999999999997653    348899999999999999999999   899999999999999999999999999998


Q ss_pred             cccCCCCC--cccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhc----c
Q 048419          484 IYEHGANP--QTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHL----E  557 (653)
Q Consensus       484 ~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~----~  557 (653)
                      ........  ......++..|+|||.+.+..++.++|||||||++|||++|+.|+......-    .+.......    .
T Consensus       194 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~----~~~~~~~~~~~~~~  269 (326)
T 2w1i_A          194 VLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEF----MRMIGNDKQGQMIV  269 (326)
T ss_dssp             ECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHH----HHHHCTTCCTHHHH
T ss_pred             hccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHH----HHhhccccchhhhH
Confidence            76543221  1123356778999999998889999999999999999999999886432210    000000000    0


Q ss_pred             cchhHhhhhcc-CcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          558 GEITQAIDQTL-DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       558 ~~~~~~~d~~l-~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                      ..+.+.+.... ...+......+.+++.+||+.||.+||++.||++.|+.
T Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~  319 (326)
T 2w1i_A          270 FHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQ  319 (326)
T ss_dssp             HHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHHHHhhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence            01111111111 11122335678999999999999999999999999864

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=100.00  E-value=4e-40  Score=345.64  Aligned_cols=269  Identities=22%  Similarity=0.346  Sum_probs=214.4

Q ss_pred             CcccCHHHHHHhhcCcCcc-eeeeeeCcEEEEEEEeCCCCcEEEEEEeccC--chhhHHHHHHHHHHHhhcC-CCceeee
Q 048419          317 ARRFKYAELASVTKGFGEQ-NLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLR-HRNLVQL  392 (653)
Q Consensus       317 ~~~f~~~el~~at~~f~~~-~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~-H~niv~l  392 (653)
                      ...+.+.......++|... +.||+|+||.||+|....+++.||||++...  .......+.+|+.++++++ ||||+++
T Consensus        15 ~~n~~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~   94 (327)
T 3lm5_A           15 TENLYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINL   94 (327)
T ss_dssp             -CCCCSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCE
T ss_pred             chhhHHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEE
Confidence            3445556667778888877 8999999999999999989999999998654  2334678899999999995 6999999


Q ss_pred             eeeecccceeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcC--
Q 048419          393 HGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDT--  470 (653)
Q Consensus       393 ~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~--  470 (653)
                      ++++.+.+..++||||+++|+|.+++....   ...+++.+++.++.||+.||+|||+   ++|+||||||+|||++.  
T Consensus        95 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~i~~ql~~~L~~LH~---~givH~Dikp~NIl~~~~~  168 (327)
T 3lm5_A           95 HEVYENTSEIILILEYAAGGEIFSLCLPEL---AEMVSENDVIRLIKQILEGVYYLHQ---NNIVHLDLKPQNILLSSIY  168 (327)
T ss_dssp             EEEEECSSEEEEEEECCTTEEGGGGGSSCC----CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESCBT
T ss_pred             EEEEEeCCeEEEEEEecCCCcHHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHH---CCeecCcCChHHEEEecCC
Confidence            999999999999999999999999986543   3568999999999999999999999   89999999999999987  


Q ss_pred             -CCcEEEEeecCcccccCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHH
Q 048419          471 -YLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVD  549 (653)
Q Consensus       471 -~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~  549 (653)
                       ++.+||+|||+++......  ......||+.|+|||++.+..++.++|||||||++|||++|+.||..........   
T Consensus       169 ~~~~~kL~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~---  243 (327)
T 3lm5_A          169 PLGDIKIVDFGMSRKIGHAC--ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYL---  243 (327)
T ss_dssp             TBCCEEECCGGGCEEC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH---
T ss_pred             CCCcEEEeeCccccccCCcc--ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHH---
Confidence             7899999999998764322  2234579999999999999999999999999999999999999997654432111   


Q ss_pred             HHHhhhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          550 WVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       550 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                      .+....  ....       ..........+.+++.+||+.||.+|||+.|++++-.
T Consensus       244 ~i~~~~--~~~~-------~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h~~  290 (327)
T 3lm5_A          244 NISQVN--VDYS-------EETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSW  290 (327)
T ss_dssp             HHHHTC--CCCC-------TTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTCGG
T ss_pred             HHHhcc--cccC-------chhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCCHh
Confidence            111100  0000       0111123466889999999999999999999998754

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=100.00  E-value=2.9e-40  Score=340.65  Aligned_cols=262  Identities=21%  Similarity=0.283  Sum_probs=202.7

Q ss_pred             HhhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeee-cccceeEEE
Q 048419          327 SVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWC-RKQDELLLV  405 (653)
Q Consensus       327 ~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~-~~~~~~~lV  405 (653)
                      ...++|...+.||+|+||.||+|.+..+++.||||++.....  .+.+.+|+.++++++|++++..+.++ ...+..++|
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv   83 (296)
T 4hgt_A            6 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMV   83 (296)
T ss_dssp             -----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEE
T ss_pred             ccCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc--chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEE
Confidence            456789999999999999999999988899999998754322  23578899999999988877777766 556678999


Q ss_pred             EeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEE---cCCCcEEEEeecCc
Q 048419          406 YDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILL---DTYLNAKLGDFGLA  482 (653)
Q Consensus       406 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~DfGla  482 (653)
                      |||+ +++|.+++....    ..+++.+++.++.||+.||.|||+   ++|+||||||+|||+   +.++.+||+|||++
T Consensus        84 ~e~~-~~~L~~~~~~~~----~~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a  155 (296)
T 4hgt_A           84 MELL-GPSLEDLFNFCS----RKFSLKTVLLLADQMISRIEYIHS---KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLA  155 (296)
T ss_dssp             EECC-CCBHHHHHHHTT----SCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECCGGGTTCEEECCCTTC
T ss_pred             EEcc-CCCHHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeeeeccCCCCeEEEecCccc
Confidence            9999 999999997542    348999999999999999999999   899999999999999   78999999999999


Q ss_pred             ccccCCCC------CcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhc
Q 048419          483 KIYEHGAN------PQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHL  556 (653)
Q Consensus       483 ~~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~  556 (653)
                      +.......      .......||+.|+|||.+.+..++.++|||||||++|||++|+.||..............+.....
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~  235 (296)
T 4hgt_A          156 KKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKM  235 (296)
T ss_dssp             EECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHH
T ss_pred             eeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccc
Confidence            87654322      122345789999999999999999999999999999999999999976433221111111111110


Q ss_pred             ccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          557 EGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       557 ~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                      ...... ..   .    .....+.+++.+||+.||.+||++.+|++.|+.
T Consensus       236 ~~~~~~-~~---~----~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~  277 (296)
T 4hgt_A          236 STPIEV-LC---K----GYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRN  277 (296)
T ss_dssp             HSCHHH-HT---T----TSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHH
T ss_pred             cchhhh-hh---c----cCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHH
Confidence            000000 00   1    113578899999999999999999999998864

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=100.00  E-value=5.8e-40  Score=364.72  Aligned_cols=256  Identities=23%  Similarity=0.327  Sum_probs=209.1

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc---hhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS---QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVY  406 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  406 (653)
                      ++|...++||+|+||.||+|++..+|+.||||++....   ....+.+..|+.++++++||||+++++++.+.+.+++||
T Consensus       185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVm  264 (543)
T 3c4z_A          185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVM  264 (543)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEE
Confidence            57888999999999999999999899999999996532   234567889999999999999999999999999999999


Q ss_pred             eccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccccc
Q 048419          407 DYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE  486 (653)
Q Consensus       407 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~  486 (653)
                      ||+++|+|.+++...... ...+++..++.++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+++...
T Consensus       265 E~~~gg~L~~~l~~~~~~-~~~l~e~~~~~~~~qi~~aL~~LH~---~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~  340 (543)
T 3c4z_A          265 TIMNGGDIRYHIYNVDED-NPGFQEPRAIFYTAQIVSGLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLAVELK  340 (543)
T ss_dssp             CCCTTCBHHHHHHTSSTT-SCSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred             EeccCCCHHHHHHHhhcc-cccccHHHHHHHHHHHHHHHHHHHH---cCCcccCCChHHEEEeCCCCEEEeecceeeecc
Confidence            999999999998765321 3458999999999999999999999   899999999999999999999999999998765


Q ss_pred             CCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhH-HHHHHHHHhhhcccchhHhhh
Q 048419          487 HGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAE-LLLVDWVKELHLEGEITQAID  565 (653)
Q Consensus       487 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~d  565 (653)
                      .... ......||+.|+|||++.+..++.++|||||||++|||++|+.||........ ..+...+..            
T Consensus       341 ~~~~-~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~------------  407 (543)
T 3c4z_A          341 AGQT-KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLE------------  407 (543)
T ss_dssp             TTCC-CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHH------------
T ss_pred             CCCc-ccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhh------------
Confidence            4322 23345899999999999998999999999999999999999999976432110 111111110            


Q ss_pred             hccCcCCHHHHHHHHHHHHHcCCCCCCCCCCH-----HHHHHH
Q 048419          566 QTLDYYDLAEAELVLNLGLFCSAPNPVYRPDM-----RRVVEF  603 (653)
Q Consensus       566 ~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~-----~evl~~  603 (653)
                      .. ..++......+.+|+.+||+.||.+||++     .+|+++
T Consensus       408 ~~-~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~H  449 (543)
T 3c4z_A          408 QA-VTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTH  449 (543)
T ss_dssp             CC-CCCCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTS
T ss_pred             cc-cCCCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHcC
Confidence            00 11122234678899999999999999965     777754

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=100.00  E-value=2.7e-40  Score=339.14  Aligned_cols=251  Identities=22%  Similarity=0.309  Sum_probs=204.8

Q ss_pred             hhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC--chhhHHHHHHHHHHHhhc-CCCceeeeeeeecccceeEE
Q 048419          328 VTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRL-RHRNLVQLHGWCRKQDELLL  404 (653)
Q Consensus       328 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~l  404 (653)
                      .+++|...+.||+|+||.||+|.+..+++.||||++...  .......+.+|+..+.++ +||||+++++++.+.+..++
T Consensus         9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~l   88 (289)
T 1x8b_A            9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLI   88 (289)
T ss_dssp             HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEE
T ss_pred             ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEE
Confidence            456788999999999999999999988999999998754  334567788999999999 99999999999999999999


Q ss_pred             EEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcC--------------
Q 048419          405 VYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDT--------------  470 (653)
Q Consensus       405 V~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~--------------  470 (653)
                      ||||+++++|.+++...... ...+++.+++.++.||++||.|||+   ++|+||||||+|||++.              
T Consensus        89 v~e~~~~~~L~~~l~~~~~~-~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~  164 (289)
T 1x8b_A           89 QNEYCNGGSLADAISENYRI-MSYFKEAELKDLLLQVGRGLRYIHS---MSLVHMDIKPSNIFISRTSIPNAASEEGDED  164 (289)
T ss_dssp             EEECCTTCBHHHHHHHHHHH-TCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEC---------------
T ss_pred             EEEecCCCcHHHHHHhhccc-ccCCCHHHHHHHHHHHHHHHHHHHh---CCEeecCCCHHHEEEcCCCCCcccccccccc
Confidence            99999999999999765321 2458999999999999999999999   89999999999999984              


Q ss_pred             -----CCcEEEEeecCcccccCCCCCcccccccCCcccCccccccC-CCCCccceeehHHHHHHHHhCCCCCChhhhhhH
Q 048419          471 -----YLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTG-KATTSTDVYSYGILMLEVACGRRSIEPQKAAAE  544 (653)
Q Consensus       471 -----~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~  544 (653)
                           ...+||+|||++.......     ...||+.|+|||.+.+. .++.++|||||||++|||++|..++....... 
T Consensus       165 ~~~~~~~~~kl~Dfg~~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~-  238 (289)
T 1x8b_A          165 DWASNKVMFKIGDLGHVTRISSPQ-----VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQWH-  238 (289)
T ss_dssp             -----CCCEEECCCTTCEETTCSC-----CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHHHH-
T ss_pred             cccCCceEEEEcccccccccCCcc-----ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhHHH-
Confidence                 4479999999998764322     23589999999999765 56689999999999999999998775432211 


Q ss_pred             HHHHHHHHhhhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          545 LLLVDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       545 ~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                           .+    ..+.        +...+......+.+++.+||+.||.+|||+.|++++-.
T Consensus       239 -----~~----~~~~--------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~  282 (289)
T 1x8b_A          239 -----EI----RQGR--------LPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKHSV  282 (289)
T ss_dssp             -----HH----HTTC--------CCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTCTT
T ss_pred             -----HH----HcCC--------CCCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhhChH
Confidence                 00    0111        11111122467889999999999999999999998653

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=100.00  E-value=3.8e-40  Score=346.75  Aligned_cols=260  Identities=24%  Similarity=0.362  Sum_probs=209.0

Q ss_pred             hcCcCcceeeeeeCcEEEEEEEeC-------CCCcEEEEEEeccC-chhhHHHHHHHHHHHhhc-CCCceeeeeeeeccc
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGLMP-------SLGLEVAIKRIGHN-SQQGMKEFVAEIMSMGRL-RHRNLVQLHGWCRKQ  399 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~~~-------~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~  399 (653)
                      .++|...+.||+|+||.||+|.+.       .++..||||++... .....+.+.+|+.+++++ +||||++++++|.+.
T Consensus        34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~  113 (334)
T 2pvf_A           34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD  113 (334)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence            367888999999999999999975       35678999999754 344567899999999999 899999999999999


Q ss_pred             ceeEEEEeccCCCCchhhhhccccc-----------ccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEE
Q 048419          400 DELLLVYDYVPNGSLDKLLFDKDHK-----------LRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILL  468 (653)
Q Consensus       400 ~~~~lV~E~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll  468 (653)
                      +..++||||+++|+|.+++......           ....+++.+++.++.||++||.|||+   ++|+||||||+|||+
T Consensus       114 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll  190 (334)
T 2pvf_A          114 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVLV  190 (334)
T ss_dssp             SCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEE
T ss_pred             CceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCccceEEE
Confidence            9999999999999999999765321           12348899999999999999999999   899999999999999


Q ss_pred             cCCCcEEEEeecCcccccCCCC-CcccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHH
Q 048419          469 DTYLNAKLGDFGLAKIYEHGAN-PQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELL  546 (653)
Q Consensus       469 ~~~~~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~  546 (653)
                      +.++.+||+|||+++....... .......+++.|+|||.+.+..++.++|||||||++|||++ |+.||.......   
T Consensus       191 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~---  267 (334)
T 2pvf_A          191 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE---  267 (334)
T ss_dssp             CTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH---
T ss_pred             cCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHH---
Confidence            9999999999999987654322 11233456789999999988889999999999999999999 999997654321   


Q ss_pred             HHHHHHhhhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          547 LVDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       547 l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                      +...+....            ...........+.+++.+||+.||.+||++.|+++.|+.
T Consensus       268 ~~~~~~~~~------------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~  315 (334)
T 2pvf_A          268 LFKLLKEGH------------RMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR  315 (334)
T ss_dssp             HHHHHHHTC------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHHHhcCC------------CCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence            111111110            001112234578899999999999999999999999875

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=100.00  E-value=8.7e-40  Score=338.96  Aligned_cols=255  Identities=22%  Similarity=0.307  Sum_probs=202.7

Q ss_pred             hhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc----hhhHHHHHHHHHHHhhcCCCceeeeeeee--cccce
Q 048419          328 VTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS----QQGMKEFVAEIMSMGRLRHRNLVQLHGWC--RKQDE  401 (653)
Q Consensus       328 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~H~niv~l~g~~--~~~~~  401 (653)
                      .-++|...+.||+|+||.||++.+..+++.||||++....    ....+.+.+|+.++++++|+||+++++++  .+.+.
T Consensus         3 l~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~   82 (305)
T 2wtk_C            3 LIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQK   82 (305)
T ss_dssp             --CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---C
T ss_pred             cccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCe
Confidence            3478999999999999999999999899999999996532    24467899999999999999999999998  44567


Q ss_pred             eEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecC
Q 048419          402 LLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGL  481 (653)
Q Consensus       402 ~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl  481 (653)
                      .++||||++++ |.+++....   ...+++.+++.++.||++||.|||+   ++|+||||||+||+++.++.+||+|||+
T Consensus        83 ~~lv~e~~~~~-l~~~~~~~~---~~~~~~~~~~~~~~qi~~al~~LH~---~~i~H~dlkp~NIl~~~~~~~kl~dfg~  155 (305)
T 2wtk_C           83 MYMVMEYCVCG-MQEMLDSVP---EKRFPVCQAHGYFCQLIDGLEYLHS---QGIVHKDIKPGNLLLTTGGTLKISALGV  155 (305)
T ss_dssp             EEEEEECCSEE-HHHHHHHST---TCSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred             EEEEehhccCC-HHHHHHhCc---ccccCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCcccEEEcCCCcEEeecccc
Confidence            89999999876 777776543   3458999999999999999999999   8999999999999999999999999999


Q ss_pred             cccccCCC-CCcccccccCCcccCccccccCC--CCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhccc
Q 048419          482 AKIYEHGA-NPQTTHIVGTLGYLAPELTRTGK--ATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEG  558 (653)
Q Consensus       482 a~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~--~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~  558 (653)
                      +....... ........||+.|+|||.+.+..  ++.++||||||+++|||++|+.||.......   +.+.+..    +
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~---~~~~i~~----~  228 (305)
T 2wtk_C          156 AEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYK---LFENIGK----G  228 (305)
T ss_dssp             CEECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHH---HHHHHHH----C
T ss_pred             ccccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHH---HHHHHhc----C
Confidence            98764322 22223456899999999987644  3779999999999999999999998654321   1111111    0


Q ss_pred             chhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          559 EITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       559 ~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                      .         ...+......+.+++.+||+.||.+|||+.|++++..
T Consensus       229 ~---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~  266 (305)
T 2wtk_C          229 S---------YAIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSW  266 (305)
T ss_dssp             C---------CCCCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHSHH
T ss_pred             C---------CCCCCccCHHHHHHHHHHccCChhhCCCHHHHhcCcc
Confidence            0         0011123456889999999999999999999998654

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=100.00  E-value=2.6e-40  Score=338.94  Aligned_cols=252  Identities=25%  Similarity=0.394  Sum_probs=206.8

Q ss_pred             hhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecc---------
Q 048419          328 VTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRK---------  398 (653)
Q Consensus       328 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~---------  398 (653)
                      ..++|...+.||+|+||.||+|.+..+++.||||++....    +.+.+|++++++++||||+++++++..         
T Consensus         9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~   84 (284)
T 2a19_B            9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSS   84 (284)
T ss_dssp             HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-----
T ss_pred             hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccc
Confidence            4567889999999999999999999889999999996554    346789999999999999999998854         


Q ss_pred             -------cceeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCC
Q 048419          399 -------QDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTY  471 (653)
Q Consensus       399 -------~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~  471 (653)
                             ...+++||||+++++|.+++....   ...+++..++.++.||+.||.|||+   ++|+|+||||+||+++.+
T Consensus        85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~  158 (284)
T 2a19_B           85 KNSSRSKTKCLFIQMEFCDKGTLEQWIEKRR---GEKLDKVLALELFEQITKGVDYIHS---KKLINRDLKPSNIFLVDT  158 (284)
T ss_dssp             ----CCEEEEEEEEECCCCSCBHHHHHHHGG---GSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEET
T ss_pred             ccccccCcceEEEEEeccCCCCHHHHHhhcc---CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCCHHHEEEcCC
Confidence                   445899999999999999997653   3458999999999999999999999   899999999999999999


Q ss_pred             CcEEEEeecCcccccCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHH
Q 048419          472 LNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWV  551 (653)
Q Consensus       472 ~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~  551 (653)
                      +.+||+|||++.......  ......|++.|+|||.+.+..++.++||||||+++|||++|..|+.....     .... 
T Consensus       159 ~~~kl~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~-----~~~~-  230 (284)
T 2a19_B          159 KQVKIGDFGLVTSLKNDG--KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSK-----FFTD-  230 (284)
T ss_dssp             TEEEECCCTTCEESSCCS--CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHHH-----HHHH-
T ss_pred             CCEEECcchhheeccccc--cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHHH-----HHHH-
Confidence            999999999998765432  22345689999999999998999999999999999999999988753221     1000 


Q ss_pred             HhhhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcCCCCCC
Q 048419          552 KELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLGDSSLP  611 (653)
Q Consensus       552 ~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~p  611 (653)
                         ...+.+.       .    .....+.+++.+||+.||.+||++.|++++|+.-...+
T Consensus       231 ---~~~~~~~-------~----~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~  276 (284)
T 2a19_B          231 ---LRDGIIS-------D----IFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSP  276 (284)
T ss_dssp             ---HHTTCCC-------T----TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC--
T ss_pred             ---hhccccc-------c----cCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCC
Confidence               0111111       1    12345789999999999999999999999997654433

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=100.00  E-value=7.2e-41  Score=352.50  Aligned_cols=249  Identities=20%  Similarity=0.282  Sum_probs=208.0

Q ss_pred             hhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCch--------hhHHHHHHHHHHHhhcCCCceeeeeeeeccc
Q 048419          328 VTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQ--------QGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQ  399 (653)
Q Consensus       328 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~  399 (653)
                      ..++|...+.||+|+||.||+|.+..+++.||||++.....        ...+.+.+|+.++++++||||+++++++.+.
T Consensus        22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~  101 (335)
T 3dls_A           22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ  101 (335)
T ss_dssp             HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred             cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence            45679999999999999999999999999999999965421        1334677899999999999999999999999


Q ss_pred             ceeEEEEeccCCC-CchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEe
Q 048419          400 DELLLVYDYVPNG-SLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGD  478 (653)
Q Consensus       400 ~~~~lV~E~~~~g-sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D  478 (653)
                      +..++||||+.+| +|.+++....     .+++..++.++.||+.||.|||+   ++|+||||||+|||++.++.+||+|
T Consensus       102 ~~~~lv~e~~~~g~~l~~~~~~~~-----~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~D  173 (335)
T 3dls_A          102 GFFQLVMEKHGSGLDLFAFIDRHP-----RLDEPLASYIFRQLVSAVGYLRL---KDIIHRDIKDENIVIAEDFTIKLID  173 (335)
T ss_dssp             SEEEEEEECCTTSCBHHHHHHTCC-----CCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECC
T ss_pred             CEEEEEEEeCCCCccHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHh---CCeEEeccCHHHEEEcCCCcEEEee
Confidence            9999999999777 9999987643     48999999999999999999999   8999999999999999999999999


Q ss_pred             ecCcccccCCCCCcccccccCCcccCccccccCCC-CCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcc
Q 048419          479 FGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKA-TTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLE  557 (653)
Q Consensus       479 fGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~  557 (653)
                      ||+++......  ......||+.|+|||.+.+..+ +.++|||||||++|||++|+.||.......              
T Consensus       174 fg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~--------------  237 (335)
T 3dls_A          174 FGSAAYLERGK--LFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEETV--------------  237 (335)
T ss_dssp             CTTCEECCTTC--CBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGGT--------------
T ss_pred             cccceECCCCC--ceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHHH--------------
Confidence            99998765432  2334579999999999988776 789999999999999999999997532210              


Q ss_pred             cchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcCCC
Q 048419          558 GEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLGDS  608 (653)
Q Consensus       558 ~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  608 (653)
                             .... ..+......+.+|+.+||+.||.+|||+.|++++-.-..
T Consensus       238 -------~~~~-~~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~hp~~~~  280 (335)
T 3dls_A          238 -------EAAI-HPPYLVSKELMSLVSGLLQPVPERRTTLEKLVTDPWVTQ  280 (335)
T ss_dssp             -------TTCC-CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHCTTTTC
T ss_pred             -------hhcc-CCCcccCHHHHHHHHHHccCChhhCcCHHHHhcCccccC
Confidence                   0000 001112356889999999999999999999999865443

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.6e-39  Score=341.75  Aligned_cols=274  Identities=24%  Similarity=0.310  Sum_probs=204.3

Q ss_pred             CCcccCHHHHHHhhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhh--cCCCceeeee
Q 048419          316 GARRFKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGR--LRHRNLVQLH  393 (653)
Q Consensus       316 ~~~~f~~~el~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~H~niv~l~  393 (653)
                      .........-....++|...+.||+|+||.||+|.+.  ++.||||++....   ...+..|.+++..  ++||||++++
T Consensus        23 ~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~   97 (337)
T 3mdy_A           23 SGSGLPLLVQRTIAKQIQMVKQIGKGRYGEVWMGKWR--GEKVAVKVFFTTE---EASWFRETEIYQTVLMRHENILGFI   97 (337)
T ss_dssp             SCSSSCHHHHTTHHHHCEEEEEEEEETTEEEEEEEET--TEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEE
T ss_pred             CCCCCCcccccccccceEEEeEeecCCCeEEEEEEEC--CceEEEEEEeccc---cchhhhHHHHHHHHhhcCCCeeeEE
Confidence            3445555566667789999999999999999999986  7899999985432   2344455555554  4899999999


Q ss_pred             eeeccc----ceeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcC-----CCCeEecCCCCC
Q 048419          394 GWCRKQ----DELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEEC-----NQRVVHRDVKPS  464 (653)
Q Consensus       394 g~~~~~----~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~-----~~~ivH~Dlkp~  464 (653)
                      +++...    ...++||||+++|+|.+++...      .+++.+++.++.|++.||.|||+.+     .++|+||||||+
T Consensus        98 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~  171 (337)
T 3mdy_A           98 AADIKGTGSWTQLYLITDYHENGSLYDYLKST------TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSK  171 (337)
T ss_dssp             EEEEESCGGGCEEEEEECCCTTCBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGG
T ss_pred             EEEccCCCCCCceEEEEeccCCCcHHHHhhcc------CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchH
Confidence            998777    6789999999999999999643      3899999999999999999999820     129999999999


Q ss_pred             cEEEcCCCcEEEEeecCcccccCCCCCc---ccccccCCcccCccccccCCCCCc------cceeehHHHHHHHHhC---
Q 048419          465 NILLDTYLNAKLGDFGLAKIYEHGANPQ---TTHIVGTLGYLAPELTRTGKATTS------TDVYSYGILMLEVACG---  532 (653)
Q Consensus       465 NIll~~~~~~kl~DfGla~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~k------sDV~s~Gvvl~elltG---  532 (653)
                      |||++.++.+||+|||+++.........   .....||+.|+|||.+.+...+.+      +|||||||++|||++|   
T Consensus       172 Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~  251 (337)
T 3mdy_A          172 NILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVS  251 (337)
T ss_dssp             GEEECTTSCEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCB
T ss_pred             HEEECCCCCEEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCc
Confidence            9999999999999999998664432211   123579999999999987766665      9999999999999999   


Q ss_pred             -------CCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhcc--CcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 048419          533 -------RRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTL--DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEF  603 (653)
Q Consensus       533 -------~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l--~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  603 (653)
                             +.||......... ... .........    ..+.+  ..........+.+|+.+||+.||.+|||+.||+++
T Consensus       252 ~~~~~~~~~p~~~~~~~~~~-~~~-~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  325 (337)
T 3mdy_A          252 GGIVEEYQLPYHDLVPSDPS-YED-MREIVCIKK----LRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKT  325 (337)
T ss_dssp             TTBCCCCCCTTTTTSCSSCC-HHH-HHHHHTTSC----CCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred             ccccccccccHhhhcCCCCc-hhh-hHHHHhhhc----cCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHH
Confidence                   5666543221100 000 000000000    00111  00112567889999999999999999999999999


Q ss_pred             HcC
Q 048419          604 LLG  606 (653)
Q Consensus       604 L~~  606 (653)
                      |+.
T Consensus       326 L~~  328 (337)
T 3mdy_A          326 LAK  328 (337)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            975

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=3.3e-40  Score=347.22  Aligned_cols=255  Identities=29%  Similarity=0.472  Sum_probs=200.5

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCC----CcEEEEEEeccC-chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSL----GLEVAIKRIGHN-SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLL  404 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~----~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  404 (653)
                      ++|...+.||+|+||.||+|.+..+    +..||||.+... .......+.+|+.++++++||||+++++++.+.+..++
T Consensus        44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  123 (333)
T 1mqb_A           44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI  123 (333)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEE
Confidence            4566789999999999999987643    346999999754 33455678999999999999999999999999999999


Q ss_pred             EEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccc
Q 048419          405 VYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKI  484 (653)
Q Consensus       405 V~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~  484 (653)
                      ||||+++++|.+++....    ..+++.+++.++.||++||.|||+   ++|+||||||+|||++.++.+||+|||+++.
T Consensus       124 v~e~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~  196 (333)
T 1mqb_A          124 ITEYMENGALDKFLREKD----GEFSVLQLVGMLRGIAAGMKYLAN---MNYVHRDLAARNILVNSNLVCKVSDFGLSRV  196 (333)
T ss_dssp             EEECCTTEEHHHHHHHTT----TCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCCCC---
T ss_pred             EEeCCCCCcHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChheEEECCCCcEEECCCCcchh
Confidence            999999999999997642    458999999999999999999999   8999999999999999999999999999987


Q ss_pred             ccCCCCC--cccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhhcccchh
Q 048419          485 YEHGANP--QTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELHLEGEIT  561 (653)
Q Consensus       485 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~  561 (653)
                      .......  ......+|+.|+|||.+.+..++.++|||||||++|||++ |+.||.......   +...+....   .  
T Consensus       197 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~---~~~~~~~~~---~--  268 (333)
T 1mqb_A          197 LEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHE---VMKAINDGF---R--  268 (333)
T ss_dssp             --------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH---HHHHHHTTC---C--
T ss_pred             hccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHH---HHHHHHCCC---c--
Confidence            6443221  1222346788999999998899999999999999999999 999997544321   111111110   0  


Q ss_pred             HhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          562 QAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       562 ~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                             ..........+.+++.+||+.||.+||++.+++++|+.
T Consensus       269 -------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~  306 (333)
T 1mqb_A          269 -------LPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDK  306 (333)
T ss_dssp             -------CCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred             -------CCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence                   00111234678899999999999999999999999865

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=100.00  E-value=1.4e-40  Score=347.65  Aligned_cols=267  Identities=25%  Similarity=0.333  Sum_probs=207.3

Q ss_pred             cCc-CcceeeeeeCcEEEEEEEe----CCCCcEEEEEEeccCc-hhhHHHHHHHHHHHhhcCCCceeeeeeeeccc--ce
Q 048419          330 KGF-GEQNLVGSGGFGRVYRGLM----PSLGLEVAIKRIGHNS-QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQ--DE  401 (653)
Q Consensus       330 ~~f-~~~~~LG~G~fg~Vy~~~~----~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~--~~  401 (653)
                      ++| ...+.||+|+||.||++.+    ..+++.||||++.... ....+.+.+|++++++++||||+++++++.+.  ..
T Consensus        30 ~r~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  109 (318)
T 3lxp_A           30 KRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAAS  109 (318)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTE
T ss_pred             HHHHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCce
Confidence            344 8899999999999988764    3468899999997653 44567899999999999999999999999874  57


Q ss_pred             eEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecC
Q 048419          402 LLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGL  481 (653)
Q Consensus       402 ~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl  481 (653)
                      +++||||+++++|.+++...      .+++.+++.++.||+.||.|||+   ++|+||||||+||+++.++.+||+|||+
T Consensus       110 ~~lv~e~~~~~~L~~~l~~~------~~~~~~~~~i~~~l~~~l~~LH~---~~ivH~Dikp~Nil~~~~~~~kl~Dfg~  180 (318)
T 3lxp_A          110 LQLVMEYVPLGSLRDYLPRH------SIGLAQLLLFAQQICEGMAYLHA---QHYIHRDLAARNVLLDNDRLVKIGDFGL  180 (318)
T ss_dssp             EEEEECCCTTCBHHHHGGGS------CCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCGGG
T ss_pred             EEEEEecccCCcHHHHHhhC------CCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCchheEEEcCCCCEEECCccc
Confidence            89999999999999999654      28899999999999999999999   8999999999999999999999999999


Q ss_pred             cccccCCCCC--cccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccc
Q 048419          482 AKIYEHGANP--QTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGE  559 (653)
Q Consensus       482 a~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~  559 (653)
                      ++........  ......+|..|+|||.+.+..++.++|||||||++|||++|+.||......... ...+.........
T Consensus       181 a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~-~~~~~~~~~~~~~  259 (318)
T 3lxp_A          181 AKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLE-LIGIAQGQMTVLR  259 (318)
T ss_dssp             CEECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHH-HHCSCCHHHHHHH
T ss_pred             cccccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhh-hhcccccchhHHH
Confidence            9876543221  123345788899999999888999999999999999999999998754332110 0000000000111


Q ss_pred             hhHhhhhcc-CcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          560 ITQAIDQTL-DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       560 ~~~~~d~~l-~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                      +.+.+.... ...+......+.+|+.+||+.||.+|||+.|+++.|+.
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~  307 (318)
T 3lxp_A          260 LTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKT  307 (318)
T ss_dssp             HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHHHhcccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHH
Confidence            122222221 12223345779999999999999999999999999864

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=100.00  E-value=1.8e-40  Score=345.75  Aligned_cols=271  Identities=23%  Similarity=0.331  Sum_probs=215.0

Q ss_pred             ccCHHHHHHhhcCcCcceeeeeeCcEEEEEEEe-----CCCCcEEEEEEeccCc-hhhHHHHHHHHHHHhhc-CCCceee
Q 048419          319 RFKYAELASVTKGFGEQNLVGSGGFGRVYRGLM-----PSLGLEVAIKRIGHNS-QQGMKEFVAEIMSMGRL-RHRNLVQ  391 (653)
Q Consensus       319 ~f~~~el~~at~~f~~~~~LG~G~fg~Vy~~~~-----~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~  391 (653)
                      .+...+.....++|...+.||+|+||.||+|.+     ..+++.||||++.... ....+.+.+|+.+++++ +||||++
T Consensus        16 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~   95 (316)
T 2xir_A           16 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN   95 (316)
T ss_dssp             CCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             cccccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeee
Confidence            344555555678899999999999999999984     3467899999997643 34556889999999999 7999999


Q ss_pred             eeeeecccc-eeEEEEeccCCCCchhhhhcccccc-----------cccchhhhHHHHHHHHHHHHHHHHhcCCCCeEec
Q 048419          392 LHGWCRKQD-ELLLVYDYVPNGSLDKLLFDKDHKL-----------RKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHR  459 (653)
Q Consensus       392 l~g~~~~~~-~~~lV~E~~~~gsL~~~l~~~~~~~-----------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~  459 (653)
                      +++++...+ ..++||||+++++|.+++.......           ...+++..++.++.||++||.|||+   ++|+||
T Consensus        96 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~H~  172 (316)
T 2xir_A           96 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHR  172 (316)
T ss_dssp             EEEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHH---TTCCCS
T ss_pred             EEEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHh---CCcccc
Confidence            999987765 5899999999999999998754211           1238899999999999999999999   899999


Q ss_pred             CCCCCcEEEcCCCcEEEEeecCcccccCCCCC-cccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCC
Q 048419          460 DVKPSNILLDTYLNAKLGDFGLAKIYEHGANP-QTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIE  537 (653)
Q Consensus       460 Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~  537 (653)
                      ||||+||+++.++.+||+|||+++........ ......||+.|+|||.+.+..++.++|||||||++|||++ |+.||.
T Consensus       173 dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~  252 (316)
T 2xir_A          173 DLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP  252 (316)
T ss_dssp             CCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSST
T ss_pred             cCccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCc
Confidence            99999999999999999999999866443222 2234567889999999999899999999999999999998 999997


Q ss_pred             hhhhhhHHHHHHHHHhhhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          538 PQKAAAELLLVDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       538 ~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                      .......  +...+...    .        ....+......+.+++.+||+.||.+|||+.|++++|+.
T Consensus       253 ~~~~~~~--~~~~~~~~----~--------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~  307 (316)
T 2xir_A          253 GVKIDEE--FCRRLKEG----T--------RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGN  307 (316)
T ss_dssp             TCCCSHH--HHHHHHHT----C--------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             ccchhHH--HHHHhccC----c--------cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence            6443221  11111110    0        000111124568899999999999999999999999864

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=100.00  E-value=1.5e-40  Score=348.63  Aligned_cols=250  Identities=22%  Similarity=0.272  Sum_probs=182.6

Q ss_pred             ceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcC-CCceeeeeeeecccceeEEEEeccCCCC
Q 048419          335 QNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLR-HRNLVQLHGWCRKQDELLLVYDYVPNGS  413 (653)
Q Consensus       335 ~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lV~E~~~~gs  413 (653)
                      .+.||+|+||.||+|.+..+++.||||++...   ....+.+|+.+++++. ||||+++++++.+.+..++||||+++|+
T Consensus        16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~   92 (325)
T 3kn6_A           16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGE   92 (325)
T ss_dssp             SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred             CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCc
Confidence            37899999999999999999999999998543   3466788999999997 9999999999999999999999999999


Q ss_pred             chhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCC---cEEEEeecCcccccCCCC
Q 048419          414 LDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYL---NAKLGDFGLAKIYEHGAN  490 (653)
Q Consensus       414 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~---~~kl~DfGla~~~~~~~~  490 (653)
                      |.+++...     ..+++.+++.++.||+.||.|||+   ++|+||||||+|||++.++   .+||+|||+++...... 
T Consensus        93 L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~-  163 (325)
T 3kn6_A           93 LFERIKKK-----KHFSETEASYIMRKLVSAVSHMHD---VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDN-  163 (325)
T ss_dssp             HHHHHHHC-----SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC---
T ss_pred             HHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCC-
Confidence            99999764     348999999999999999999999   8999999999999997665   89999999998654332 


Q ss_pred             CcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHH-HHHHHHHhhhcccchhHhhhhccC
Q 048419          491 PQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAEL-LLVDWVKELHLEGEITQAIDQTLD  569 (653)
Q Consensus       491 ~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~d~~l~  569 (653)
                      .......||+.|+|||++.+..++.++|||||||++|||++|+.||......... ...+... ....+.        ..
T Consensus       164 ~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~-~i~~~~--------~~  234 (325)
T 3kn6_A          164 QPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMK-KIKKGD--------FS  234 (325)
T ss_dssp             --------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHH-HHTTTC--------CC
T ss_pred             CcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHH-HHHcCC--------CC
Confidence            2233457899999999999999999999999999999999999999864432100 0000000 001110        00


Q ss_pred             cCC---HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          570 YYD---LAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       570 ~~~---~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                      ...   ......+.+|+.+||+.||.+|||+.|++++-.
T Consensus       235 ~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h~w  273 (325)
T 3kn6_A          235 FEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEW  273 (325)
T ss_dssp             CCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTCGG
T ss_pred             CCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhcChh
Confidence            000   112467899999999999999999999997654

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=6.5e-40  Score=338.57  Aligned_cols=254  Identities=24%  Similarity=0.325  Sum_probs=202.1

Q ss_pred             cCcceeeeeeCcEEEEEEEeCCCCc---EEEEEEeccC-chhhHHHHHHHHHHHhhcCCCceeeeeeeeccccee-EEEE
Q 048419          332 FGEQNLVGSGGFGRVYRGLMPSLGL---EVAIKRIGHN-SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDEL-LLVY  406 (653)
Q Consensus       332 f~~~~~LG~G~fg~Vy~~~~~~~~~---~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~-~lV~  406 (653)
                      |...++||+|+||.||+|.+..++.   .+|+|.+... .....+.+.+|+.++++++||||+++++++.+.+.. ++|+
T Consensus        23 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~  102 (298)
T 3pls_A           23 THSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLL  102 (298)
T ss_dssp             EEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEE
T ss_pred             EccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEE
Confidence            4556899999999999998654433   7999999754 344567899999999999999999999999877655 9999


Q ss_pred             eccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccccc
Q 048419          407 DYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE  486 (653)
Q Consensus       407 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~  486 (653)
                      ||+.+|+|.+++....    ..+++.+++.++.|++.||+|||+   ++|+||||||+||+++.++.+||+|||+++...
T Consensus       103 e~~~~~~L~~~~~~~~----~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~  175 (298)
T 3pls_A          103 PYMCHGDLLQFIRSPQ----RNPTVKDLISFGLQVARGMEYLAE---QKFVHRDLAARNCMLDESFTVKVADFGLARDIL  175 (298)
T ss_dssp             CCCTTCBHHHHHHCTT----CCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTCCEEECCTTSSCTTT
T ss_pred             ecccCCCHHHHHhccc----cCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCcceEEEcCCCcEEeCcCCCccccc
Confidence            9999999999997642    458899999999999999999999   899999999999999999999999999998653


Q ss_pred             CCC---CCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHh
Q 048419          487 HGA---NPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQA  563 (653)
Q Consensus       487 ~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~  563 (653)
                      ...   ........+++.|+|||.+.+..++.++|||||||++|||++|+.|+........  +...+.....       
T Consensus       176 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~--~~~~~~~~~~-------  246 (298)
T 3pls_A          176 DREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFD--LTHFLAQGRR-------  246 (298)
T ss_dssp             TGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGG--HHHHHHTTCC-------
T ss_pred             CCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHH--HHHHhhcCCC-------
Confidence            321   1222344678899999999999999999999999999999996666543322111  1111111110       


Q ss_pred             hhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          564 IDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       564 ~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                           ...+......+.+++.+||+.||.+|||+.++++.|+.
T Consensus       247 -----~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~  284 (298)
T 3pls_A          247 -----LPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQ  284 (298)
T ss_dssp             -----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             -----CCCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence                 01111224578899999999999999999999999864

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=100.00  E-value=5.9e-40  Score=345.51  Aligned_cols=250  Identities=25%  Similarity=0.350  Sum_probs=208.7

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC---chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN---SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVY  406 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  406 (653)
                      ++|...+.||+|+||.||++.+..+++.||+|++...   .....+.+.+|+.++++++|+||+++++++.+.+..++||
T Consensus        41 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~  120 (335)
T 2owb_A           41 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVL  120 (335)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             CceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEE
Confidence            5688899999999999999999999999999998654   3345678899999999999999999999999999999999


Q ss_pred             eccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccccc
Q 048419          407 DYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE  486 (653)
Q Consensus       407 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~  486 (653)
                      ||+++++|.+++...     ..+++.+++.++.||++||.|||+   ++|+||||||+|||++.++.+||+|||+++...
T Consensus       121 e~~~~~~L~~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~  192 (335)
T 2owb_A          121 ELCRRRSLLELHKRR-----KALTEPEARYYLRQIVLGCQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE  192 (335)
T ss_dssp             CCCTTCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred             ecCCCCCHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCCEecCCCchhEEEcCCCCEEEeeccCceecc
Confidence            999999999988653     348999999999999999999999   899999999999999999999999999998764


Q ss_pred             CCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhh
Q 048419          487 HGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQ  566 (653)
Q Consensus       487 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  566 (653)
                      ... .......||..|+|||.+.+..++.++|||||||++|||++|+.||.........  .. +...  ...       
T Consensus       193 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~--~~-~~~~--~~~-------  259 (335)
T 2owb_A          193 YDG-ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETY--LR-IKKN--EYS-------  259 (335)
T ss_dssp             STT-CCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHH--HH-HHHT--CCC-------
T ss_pred             cCc-ccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHH--HH-HhcC--CCC-------
Confidence            332 2233457899999999999888999999999999999999999999865432211  00 1000  000       


Q ss_pred             ccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          567 TLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       567 ~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                          .+......+.+++.+||+.||.+||++.|++++-
T Consensus       260 ----~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~~~  293 (335)
T 2owb_A          260 ----IPKHINPVAASLIQKMLQTDPTARPTINELLNDE  293 (335)
T ss_dssp             ----CCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSH
T ss_pred             ----CCccCCHHHHHHHHHHccCChhHCcCHHHHhcCc
Confidence                0111235678999999999999999999999854

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=100.00  E-value=2.2e-40  Score=347.62  Aligned_cols=256  Identities=24%  Similarity=0.338  Sum_probs=201.2

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcE----EEEEEeccC-chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLE----VAIKRIGHN-SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLL  404 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~----vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  404 (653)
                      ++|+..+.||+|+||.||+|.+..+++.    ||+|.+... .....+.+.+|+.++++++||||++++++|.... .++
T Consensus        15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~   93 (327)
T 3lzb_A           15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL   93 (327)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EEE
T ss_pred             hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ceE
Confidence            5788899999999999999998777664    577777543 3455778999999999999999999999998765 789


Q ss_pred             EEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccc
Q 048419          405 VYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKI  484 (653)
Q Consensus       405 V~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~  484 (653)
                      |+||+++|+|.+++....    ..+++..++.++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+++.
T Consensus        94 v~~~~~~g~L~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~  166 (327)
T 3lzb_A           94 ITQLMPFGCLLDYVREHK----DNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKL  166 (327)
T ss_dssp             EECCCSSCBHHHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEETTEEEECCTTC---
T ss_pred             EEEecCCCcHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHhh---CCCcCCCCCHHHEEEcCCCCEEEccCcceeE
Confidence            999999999999997653    358899999999999999999999   8999999999999999999999999999987


Q ss_pred             ccCCCC-CcccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhhcccchhH
Q 048419          485 YEHGAN-PQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELHLEGEITQ  562 (653)
Q Consensus       485 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~  562 (653)
                      ...... .......+|+.|+|||.+.+..++.++|||||||++|||++ |+.||.......   +...+....       
T Consensus       167 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~---~~~~~~~~~-------  236 (327)
T 3lzb_A          167 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---ISSILEKGE-------  236 (327)
T ss_dssp             -------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG---HHHHHHTTC-------
T ss_pred             ccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHH---HHHHHHcCC-------
Confidence            643322 12233456789999999999999999999999999999999 999998654332   111111110       


Q ss_pred             hhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcCCC
Q 048419          563 AIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLGDS  608 (653)
Q Consensus       563 ~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  608 (653)
                           ....+......+.+++.+||+.||.+||++.|+++.|+...
T Consensus       237 -----~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~  277 (327)
T 3lzb_A          237 -----RLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMA  277 (327)
T ss_dssp             -----CCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             -----CCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence                 01111223456889999999999999999999999997643

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=100.00  E-value=2.8e-40  Score=338.08  Aligned_cols=252  Identities=25%  Similarity=0.402  Sum_probs=187.2

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc---hhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS---QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVY  406 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  406 (653)
                      ++|...+.||+|+||.||+|....+++.||||++....   ....+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus        11 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   90 (278)
T 3cok_A           11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVL   90 (278)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEE
T ss_pred             ccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEE
Confidence            56888999999999999999998889999999986432   223567899999999999999999999999999999999


Q ss_pred             eccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccccc
Q 048419          407 DYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE  486 (653)
Q Consensus       407 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~  486 (653)
                      ||+++++|.+++....    ..+++.+++.++.|+++||.|||+   ++++||||||+||+++.++.+||+|||++....
T Consensus        91 e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~  163 (278)
T 3cok_A           91 EMCHNGEMNRYLKNRV----KPFSENEARHFMHQIITGMLYLHS---HGILHRDLTLSNLLLTRNMNIKIADFGLATQLK  163 (278)
T ss_dssp             ECCTTEEHHHHHHTCS----SCCCHHHHHHHHHHHHHHHHHHHH---TTEECSSCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred             ecCCCCcHHHHHhhcc----CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCCEEEEeecceeecc
Confidence            9999999999997642    458999999999999999999999   899999999999999999999999999998764


Q ss_pred             CCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhh
Q 048419          487 HGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQ  566 (653)
Q Consensus       487 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  566 (653)
                      .... ......||+.|+|||.+.+..++.++||||||+++|||++|+.||.........      ..         ....
T Consensus       164 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~------~~---------~~~~  227 (278)
T 3cok_A          164 MPHE-KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTL------NK---------VVLA  227 (278)
T ss_dssp             -----------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC--------------------CCSS
T ss_pred             CCCC-cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHH------HH---------Hhhc
Confidence            3221 223356899999999999888999999999999999999999999754322100      00         0000


Q ss_pred             ccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          567 TLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       567 ~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                      .. ..+......+.+++.+||+.||.+||++.+++++-.
T Consensus       228 ~~-~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~  265 (278)
T 3cok_A          228 DY-EMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLDHPF  265 (278)
T ss_dssp             CC-CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSTT
T ss_pred             cc-CCccccCHHHHHHHHHHcccCHhhCCCHHHHhcCcc
Confidence            00 011122456889999999999999999999998543

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=100.00  E-value=2.3e-40  Score=344.40  Aligned_cols=261  Identities=24%  Similarity=0.400  Sum_probs=199.9

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC---chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN---SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVY  406 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  406 (653)
                      ++|...+.||+|+||.||+|....+++.||||++...   .....+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus        32 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  111 (310)
T 2wqm_A           32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL  111 (310)
T ss_dssp             GGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             cceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEE
Confidence            5688899999999999999999888999999999653   3445678899999999999999999999999999999999


Q ss_pred             eccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccccc
Q 048419          407 DYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE  486 (653)
Q Consensus       407 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~  486 (653)
                      ||+++++|.+++..... ....+++..++.++.||+.||.|||+   ++++|+||||+||+++.++.+||+|||+++...
T Consensus       112 e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~  187 (310)
T 2wqm_A          112 ELADAGDLSRMIKHFKK-QKRLIPERTVWKYFVQLCSALEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFS  187 (310)
T ss_dssp             ECCCSCBHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCC-------
T ss_pred             ecCCCCCHHHHHHHhcc-cccCCCHHHHHHHHHHHHHHHHHHhh---CCeeCCCCcHHHEEEcCCCCEEEEeccceeeec
Confidence            99999999999975321 13458899999999999999999999   899999999999999999999999999998654


Q ss_pred             CCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhh
Q 048419          487 HGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQ  566 (653)
Q Consensus       487 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  566 (653)
                      ... .......|++.|+|||.+.+..++.++||||||+++|||++|+.||....... ..+...+..    .....    
T Consensus       188 ~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~~----~~~~~----  257 (310)
T 2wqm_A          188 SKT-TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNL-YSLCKKIEQ----CDYPP----  257 (310)
T ss_dssp             ------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCH-HHHHHHHHT----TCSCC----
T ss_pred             CCC-ccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhH-HHHHHHhhc----ccCCC----
Confidence            322 12233568999999999999899999999999999999999999997543211 111111111    10000    


Q ss_pred             ccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcCC
Q 048419          567 TLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLGD  607 (653)
Q Consensus       567 ~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  607 (653)
                       +  ........+.+++.+||+.||.+||++.+|++.|+.-
T Consensus       258 -~--~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l  295 (310)
T 2wqm_A          258 -L--PSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRM  295 (310)
T ss_dssp             -C--CTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             -C--cccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence             0  0012245688999999999999999999999999754

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=100.00  E-value=8.5e-40  Score=337.45  Aligned_cols=251  Identities=25%  Similarity=0.359  Sum_probs=209.3

Q ss_pred             hcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC---chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEE
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN---SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLV  405 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV  405 (653)
                      .++|...+.||+|+||.||++.+..+++.||+|++...   .....+.+.+|+.++++++|+||+++++++.+.+..++|
T Consensus        14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv   93 (294)
T 2rku_A           14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV   93 (294)
T ss_dssp             TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence            36788899999999999999999999999999998654   334567889999999999999999999999999999999


Q ss_pred             EeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccc
Q 048419          406 YDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIY  485 (653)
Q Consensus       406 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~  485 (653)
                      |||+++++|.+++...     ..+++.+++.++.|+++||.|||+   ++++||||||+||+++.++.+||+|||++...
T Consensus        94 ~e~~~~~~L~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~  165 (294)
T 2rku_A           94 LELCRRRSLLELHKRR-----KALTEPEARYYLRQIVLGCQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV  165 (294)
T ss_dssp             EECCTTCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred             EecCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEcCCCCEEEEeccCceec
Confidence            9999999999988653     348999999999999999999999   89999999999999999999999999999876


Q ss_pred             cCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhh
Q 048419          486 EHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAID  565 (653)
Q Consensus       486 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d  565 (653)
                      ..... ......||+.|+|||.+.+..++.++||||||+++|||++|+.||..........   .+..    ..      
T Consensus       166 ~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~---~~~~----~~------  231 (294)
T 2rku_A          166 EYDGE-RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYL---RIKK----NE------  231 (294)
T ss_dssp             CSTTC-CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH---HHHT----TC------
T ss_pred             ccCcc-ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH---HHhh----cc------
Confidence            43222 2334578999999999998889999999999999999999999998654322110   0000    00      


Q ss_pred             hccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          566 QTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       566 ~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                        . ..+......+.+++.+||+.||.+|||+.|++++.
T Consensus       232 --~-~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~~  267 (294)
T 2rku_A          232 --Y-SIPKHINPVAASLIQKMLQTDPTARPTINELLNDE  267 (294)
T ss_dssp             --C-CCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSH
T ss_pred             --C-CCccccCHHHHHHHHHHcccChhhCcCHHHHhhCh
Confidence              0 01111235688999999999999999999999854

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=100.00  E-value=5.4e-40  Score=335.32  Aligned_cols=258  Identities=23%  Similarity=0.326  Sum_probs=209.4

Q ss_pred             hcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC-chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEe
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN-SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYD  407 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E  407 (653)
                      .++|+..+.||+|+||.||+|.+..+++.||||++... .....+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus         6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   85 (276)
T 2yex_A            6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE   85 (276)
T ss_dssp             HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEE
Confidence            46788899999999999999999988999999998644 33456788999999999999999999999999999999999


Q ss_pred             ccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccC
Q 048419          408 YVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEH  487 (653)
Q Consensus       408 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~  487 (653)
                      |+++++|.+++...     ..+++.+++.++.|++.||.|||+   ++++|+||||+||+++.++.+||+|||++.....
T Consensus        86 ~~~~~~L~~~l~~~-----~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~  157 (276)
T 2yex_A           86 YCSGGELFDRIEPD-----IGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRY  157 (276)
T ss_dssp             CCTTEEGGGGSBTT-----TBCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCEECEE
T ss_pred             ecCCCcHHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCChHHEEEccCCCEEEeeCCCccccCC
Confidence            99999999998653     348899999999999999999999   8999999999999999999999999999986543


Q ss_pred             CCC-CcccccccCCcccCccccccCCC-CCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhh
Q 048419          488 GAN-PQTTHIVGTLGYLAPELTRTGKA-TTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAID  565 (653)
Q Consensus       488 ~~~-~~~~~~~gt~~y~aPE~~~~~~~-~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d  565 (653)
                      ... .......|++.|+|||.+.+..+ +.++||||||+++|||++|+.||........ ....+......   .     
T Consensus       158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~~~~~~~~~---~-----  228 (276)
T 2yex_A          158 NNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ-EYSDWKEKKTY---L-----  228 (276)
T ss_dssp             TTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSH-HHHHHHTTCTT---S-----
T ss_pred             CcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHH-HHHHhhhcccc---c-----
Confidence            221 12234578999999999987665 6799999999999999999999976543211 11112111000   0     


Q ss_pred             hccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcCC
Q 048419          566 QTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLGD  607 (653)
Q Consensus       566 ~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  607 (653)
                      +    ........+.+++.+||+.||.+|||+.|++++..-.
T Consensus       229 ~----~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~  266 (276)
T 2yex_A          229 N----PWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYN  266 (276)
T ss_dssp             T----TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTT
T ss_pred             C----chhhcCHHHHHHHHHHCCCCchhCCCHHHHhcCcccc
Confidence            0    0011235678999999999999999999999865443

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=100.00  E-value=5.9e-40  Score=336.44  Aligned_cols=254  Identities=25%  Similarity=0.354  Sum_probs=205.1

Q ss_pred             hcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCch------hhHHHHHHHHHHHhhcCCCceeeeeeeeccccee
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQ------QGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDEL  402 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~  402 (653)
                      .++|...+.||+|+||.||+|.+..+++.||+|.+.....      ...+.+.+|+.++++++||||+++++++.+.+..
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~   83 (283)
T 3bhy_A            4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDV   83 (283)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeE
Confidence            3568889999999999999999998899999999865421      1367899999999999999999999999999999


Q ss_pred             EEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCC----cEEEEe
Q 048419          403 LLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYL----NAKLGD  478 (653)
Q Consensus       403 ~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~----~~kl~D  478 (653)
                      ++||||+++++|.+++...     ..+++.+++.++.||+.||.|||+   ++++||||||+||+++.++    .+||+|
T Consensus        84 ~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~~~~kl~d  155 (283)
T 3bhy_A           84 VLILELVSGGELFDFLAEK-----ESLTEDEATQFLKQILDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLID  155 (283)
T ss_dssp             EEEEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSSSSCCEEECC
T ss_pred             EEEEeecCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCChHHEEEecCCCCCCceEEEe
Confidence            9999999999999999653     348999999999999999999999   8999999999999998877    899999


Q ss_pred             ecCcccccCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhccc
Q 048419          479 FGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEG  558 (653)
Q Consensus       479 fGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~  558 (653)
                      ||++.......  ......|++.|+|||.+.+..++.++||||||+++|||++|+.||.........   ..+...  ..
T Consensus       156 fg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~---~~~~~~--~~  228 (283)
T 3bhy_A          156 FGIAHKIEAGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETL---TNISAV--NY  228 (283)
T ss_dssp             CTTCEECC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHH---HHHHTT--CC
T ss_pred             cccceeccCCC--cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHH---HHhHhc--cc
Confidence            99998764322  223456899999999999889999999999999999999999999865432211   111110  00


Q ss_pred             chhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          559 EITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       559 ~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                      .......+       .....+.+++.+||+.||.+||++.|++++-
T Consensus       229 ~~~~~~~~-------~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~  267 (283)
T 3bhy_A          229 DFDEEYFS-------NTSELAKDFIRRLLVKDPKRRMTIAQSLEHS  267 (283)
T ss_dssp             CCCHHHHT-------TCCHHHHHHHHTTSCSSGGGSCCHHHHHHCH
T ss_pred             CCcchhcc-------cCCHHHHHHHHHHccCCHhHCcCHHHHHhCH
Confidence            00000000       1235688999999999999999999999843

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=5.5e-40  Score=337.78  Aligned_cols=254  Identities=26%  Similarity=0.386  Sum_probs=205.6

Q ss_pred             cCcCcce-eeeeeCcEEEEEEEeC--CCCcEEEEEEeccC-chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEE
Q 048419          330 KGFGEQN-LVGSGGFGRVYRGLMP--SLGLEVAIKRIGHN-SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLV  405 (653)
Q Consensus       330 ~~f~~~~-~LG~G~fg~Vy~~~~~--~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV  405 (653)
                      ++|.... .||+|+||.||+|.+.  .++..||||++... .....+.+.+|++++++++||||+++++++ ..+..++|
T Consensus         9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv   87 (287)
T 1u59_A            9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLV   87 (287)
T ss_dssp             GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEE
T ss_pred             HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEE
Confidence            3455555 8999999999999864  45788999999764 345577899999999999999999999999 55668999


Q ss_pred             EeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccc
Q 048419          406 YDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIY  485 (653)
Q Consensus       406 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~  485 (653)
                      |||+++++|.+++...    ...+++.+++.++.|+++||.|||+   ++|+||||||+||+++.++.+||+|||+++..
T Consensus        88 ~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~  160 (287)
T 1u59_A           88 MEMAGGGPLHKFLVGK----REEIPVSNVAELLHQVSMGMKYLEE---KNFVHRDLAARNVLLVNRHYAKISDFGLSKAL  160 (287)
T ss_dssp             EECCTTEEHHHHHTTC----TTTSCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred             EEeCCCCCHHHHHHhC----CccCCHHHHHHHHHHHHHHHHHHHH---CCEeeCCCchheEEEcCCCCEEECcccceeee
Confidence            9999999999999654    2458999999999999999999999   89999999999999999999999999999876


Q ss_pred             cCCCCC--cccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhhcccchhH
Q 048419          486 EHGANP--QTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELHLEGEITQ  562 (653)
Q Consensus       486 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~  562 (653)
                      ......  ......+|+.|+|||.+.+..++.++||||||+++|||++ |+.||.......   +...+..    +.   
T Consensus       161 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~---~~~~i~~----~~---  230 (287)
T 1u59_A          161 GADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE---VMAFIEQ----GK---  230 (287)
T ss_dssp             TTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHH---HHHHHHT----TC---
T ss_pred             ccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHH---HHHHHhc----CC---
Confidence            443221  1223356889999999988889999999999999999998 999997654322   1111111    10   


Q ss_pred             hhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          563 AIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       563 ~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                           ....+......+.+++.+||+.||.+||++.+++++|+.
T Consensus       231 -----~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~  269 (287)
T 1u59_A          231 -----RMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRA  269 (287)
T ss_dssp             -----CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred             -----cCCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence                 011122334678899999999999999999999999964

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=100.00  E-value=4.8e-40  Score=341.12  Aligned_cols=254  Identities=24%  Similarity=0.358  Sum_probs=206.7

Q ss_pred             hhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEe
Q 048419          328 VTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYD  407 (653)
Q Consensus       328 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E  407 (653)
                      ..++|...+.||+|+||.||++....+|+.||||++........+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   86 (304)
T 2jam_A            7 IRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQ   86 (304)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             hhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEE
Confidence            45678899999999999999999998899999999976655555678899999999999999999999999999999999


Q ss_pred             ccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEE---cCCCcEEEEeecCccc
Q 048419          408 YVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILL---DTYLNAKLGDFGLAKI  484 (653)
Q Consensus       408 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~DfGla~~  484 (653)
                      |+++++|.+++...     ..+++.+++.++.|++.||.|||+   ++|+||||||+||++   +.++.+||+|||++..
T Consensus        87 ~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~  158 (304)
T 2jam_A           87 LVSGGELFDRILER-----GVYTEKDASLVIQQVLSAVKYLHE---NGIVHRDLKPENLLYLTPEENSKIMITDFGLSKM  158 (304)
T ss_dssp             CCCSCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCC
T ss_pred             cCCCccHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEecCCCCCCEEEccCCccee
Confidence            99999999998653     348899999999999999999999   899999999999999   7889999999999975


Q ss_pred             ccCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhh
Q 048419          485 YEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAI  564 (653)
Q Consensus       485 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  564 (653)
                      ....   ......||+.|+|||.+.+..++.++|||||||++|||++|+.||.......   +.+.+.....  ...   
T Consensus       159 ~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~---~~~~i~~~~~--~~~---  227 (304)
T 2jam_A          159 EQNG---IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESK---LFEKIKEGYY--EFE---  227 (304)
T ss_dssp             CCCB---TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHH---HHHHHHHCCC--CCC---
T ss_pred             cCCC---ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHH---HHHHHHcCCC--CCC---
Confidence            4322   2234568999999999999899999999999999999999999997654321   1111111100  000   


Q ss_pred             hhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          565 DQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       565 d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                          ..........+.+++.+||+.||.+||++.|++++-
T Consensus       228 ----~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~  263 (304)
T 2jam_A          228 ----SPFWDDISESAKDFICHLLEKDPNERYTCEKALSHP  263 (304)
T ss_dssp             ----TTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSH
T ss_pred             ----ccccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCc
Confidence                001112246788999999999999999999999854

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=100.00  E-value=5.3e-40  Score=360.80  Aligned_cols=264  Identities=22%  Similarity=0.256  Sum_probs=202.2

Q ss_pred             hhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC--chhhHHHHHHHHHHHhhcCCCceeeeeeeeccc------
Q 048419          328 VTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQ------  399 (653)
Q Consensus       328 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~------  399 (653)
                      ..++|+..+.||+|+||.||+|.+..+++.||||++...  .....+.+.+|+.++++++||||+++++++...      
T Consensus        60 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~  139 (464)
T 3ttj_A           60 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEF  139 (464)
T ss_dssp             EETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTC
T ss_pred             ecCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccC
Confidence            357899999999999999999999999999999999654  444567889999999999999999999998654      


Q ss_pred             ceeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEee
Q 048419          400 DELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDF  479 (653)
Q Consensus       400 ~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df  479 (653)
                      ...++||||+++ +|.+.+..       .+++.++..++.||+.||+|||+   ++|+||||||+|||++.++.+||+||
T Consensus       140 ~~~~lv~E~~~~-~l~~~~~~-------~l~~~~~~~~~~qil~aL~~lH~---~~iiHrDlkp~NIll~~~~~~kl~DF  208 (464)
T 3ttj_A          140 QDVYLVMELMDA-NLCQVIQM-------ELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDF  208 (464)
T ss_dssp             CEEEEEEECCSE-EHHHHHTS-------CCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCC
T ss_pred             CeEEEEEeCCCC-CHHHHHhh-------cCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChHhEEEeCCCCEEEEEE
Confidence            457999999976 46665532       37889999999999999999999   89999999999999999999999999


Q ss_pred             cCcccccCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhc---
Q 048419          480 GLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHL---  556 (653)
Q Consensus       480 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~---  556 (653)
                      |+++.....  .......||+.|+|||++.+..++.++|||||||++|||++|+.||...+..+...  ..+.....   
T Consensus       209 G~a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~--~i~~~lg~p~~  284 (464)
T 3ttj_A          209 GLARTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWN--KVIEQLGTPCP  284 (464)
T ss_dssp             CCC-----C--CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH--HHHHHHCSCCH
T ss_pred             EeeeecCCC--cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH--HHHHhcCCCCH
Confidence            999876432  23345689999999999999999999999999999999999999998765433211  11111000   


Q ss_pred             ------ccc---------------hhHhhhhcc-C---cCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          557 ------EGE---------------ITQAIDQTL-D---YYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       557 ------~~~---------------~~~~~d~~l-~---~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                            ...               ........+ .   .........+.+|+.+||+.||.+|||+.|++++-.-
T Consensus       285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~~  359 (464)
T 3ttj_A          285 EFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI  359 (464)
T ss_dssp             HHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTT
T ss_pred             HHHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcChhh
Confidence                  000               001111111 0   0011125678999999999999999999999997643

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=100.00  E-value=6.5e-40  Score=338.07  Aligned_cols=256  Identities=27%  Similarity=0.351  Sum_probs=203.9

Q ss_pred             CcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEeccC
Q 048419          331 GFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVP  410 (653)
Q Consensus       331 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~  410 (653)
                      +|....+||+|+||.||+|.+..+++.||||.+........+.+.+|+.++++++||||+++++++.+.+..++||||++
T Consensus        23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~  102 (295)
T 2clq_A           23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVP  102 (295)
T ss_dssp             TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred             CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCC
Confidence            34556699999999999999988899999999977666667889999999999999999999999999999999999999


Q ss_pred             CCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcC-CCcEEEEeecCcccccCCC
Q 048419          411 NGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDT-YLNAKLGDFGLAKIYEHGA  489 (653)
Q Consensus       411 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~-~~~~kl~DfGla~~~~~~~  489 (653)
                      +++|.+++.....  ...+++..++.++.|++.||.|||+   ++++|+||||+||+++. ++.+||+|||++.......
T Consensus       103 ~~~L~~~l~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~  177 (295)
T 2clq_A          103 GGSLSALLRSKWG--PLKDNEQTIGFYTKQILEGLKYLHD---NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN  177 (295)
T ss_dssp             EEEHHHHHHHTTC--CCTTCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC--
T ss_pred             CCCHHHHHHhhcc--CCCccHHHHHHHHHHHHHHHHHHHh---CCEEccCCChhhEEEECCCCCEEEeecccccccCCCC
Confidence            9999999976532  2346788899999999999999999   89999999999999987 8999999999998764322


Q ss_pred             CCcccccccCCcccCccccccCC--CCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhc
Q 048419          490 NPQTTHIVGTLGYLAPELTRTGK--ATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQT  567 (653)
Q Consensus       490 ~~~~~~~~gt~~y~aPE~~~~~~--~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~  567 (653)
                       .......|++.|+|||.+.+..  ++.++||||||+++|||++|+.||............  ......        .  
T Consensus       178 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~--~~~~~~--------~--  244 (295)
T 2clq_A          178 -PCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFK--VGMFKV--------H--  244 (295)
T ss_dssp             ----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHH--HHHHCC--------C--
T ss_pred             -CcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHh--hccccc--------c--
Confidence             2223457899999999987643  789999999999999999999999754332211100  000000        0  


Q ss_pred             cCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          568 LDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       568 l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                       ...+......+.+++.+||+.||.+||++.|++++-.
T Consensus       245 -~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~~~  281 (295)
T 2clq_A          245 -PEIPESMSAEAKAFILKCFEPDPDKRACANDLLVDEF  281 (295)
T ss_dssp             -CCCCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHTSGG
T ss_pred             -ccccccCCHHHHHHHHHHccCChhhCCCHHHHhcChh
Confidence             1111223457889999999999999999999997543

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=100.00  E-value=9.9e-40  Score=352.14  Aligned_cols=254  Identities=22%  Similarity=0.262  Sum_probs=193.9

Q ss_pred             cCcCcc-eeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhh-cCCCceeeeeeeecc----cceeE
Q 048419          330 KGFGEQ-NLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGR-LRHRNLVQLHGWCRK----QDELL  403 (653)
Q Consensus       330 ~~f~~~-~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~-l~H~niv~l~g~~~~----~~~~~  403 (653)
                      ++|... ++||+|+||.||+|.+..+++.||||++...     ..+.+|+.++.+ ++||||+++++++..    .+.++
T Consensus        61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~  135 (400)
T 1nxk_A           61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL  135 (400)
T ss_dssp             GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred             ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEE
Confidence            456555 6899999999999999999999999998532     356678887754 489999999998865    56789


Q ss_pred             EEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcC---CCcEEEEeec
Q 048419          404 LVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDT---YLNAKLGDFG  480 (653)
Q Consensus       404 lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~DfG  480 (653)
                      +|||||++|+|.+++....   ...+++.+++.++.||+.||.|||+   ++|+||||||+|||++.   ++.+||+|||
T Consensus       136 lv~E~~~gg~L~~~l~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~~~~kl~DFG  209 (400)
T 1nxk_A          136 IVMECLDGGELFSRIQDRG---DQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFG  209 (400)
T ss_dssp             EEEECCCSEEHHHHHHCC------CCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSTTCCEEECCCT
T ss_pred             EEEEeCCCCcHHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCcCcceEEEecCCCCccEEEEecc
Confidence            9999999999999997653   3458999999999999999999999   89999999999999987   7899999999


Q ss_pred             CcccccCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHH-HHHHHHHhhhcccc
Q 048419          481 LAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAEL-LLVDWVKELHLEGE  559 (653)
Q Consensus       481 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~-~l~~~~~~~~~~~~  559 (653)
                      +++.....  .......||+.|+|||++.+..++.++|||||||++|||++|+.||......... .....+.....  .
T Consensus       210 ~a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~--~  285 (400)
T 1nxk_A          210 FAKETTSH--NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQY--E  285 (400)
T ss_dssp             TCEECC-------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCC--C
T ss_pred             cccccCCC--CccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCcc--c
Confidence            99865432  2234457899999999999999999999999999999999999999764322100 00011110000  0


Q ss_pred             hhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          560 ITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       560 ~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                      ..   .+.    .......+.+|+.+||+.||.+|||+.|++++..
T Consensus       286 ~~---~~~----~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~  324 (400)
T 1nxk_A          286 FP---NPE----WSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPW  324 (400)
T ss_dssp             CC---TTT----TTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHH
T ss_pred             CC---Ccc----cccCCHHHHHHHHHHCCCChhHCcCHHHHhcCcc
Confidence            00   000    0123466889999999999999999999998653

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=100.00  E-value=9.2e-40  Score=354.63  Aligned_cols=257  Identities=21%  Similarity=0.315  Sum_probs=195.9

Q ss_pred             HhhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc--------hhhHHHHHHHHHHHhhcCCCceeeeeeeecc
Q 048419          327 SVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS--------QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRK  398 (653)
Q Consensus       327 ~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~  398 (653)
                      ...++|...+.||+|+||.||+|.+..+++.||||++....        ......+.+|+.++++++||||+++++++..
T Consensus       132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~  211 (419)
T 3i6u_A          132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA  211 (419)
T ss_dssp             HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES
T ss_pred             hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec
Confidence            45678999999999999999999999999999999986431        1122357899999999999999999999854


Q ss_pred             cceeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCC---CcEE
Q 048419          399 QDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTY---LNAK  475 (653)
Q Consensus       399 ~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~---~~~k  475 (653)
                       +..++||||+++|+|.+++...     ..+++.+++.++.|++.||+|||+   ++|+||||||+|||++.+   ..+|
T Consensus       212 -~~~~lv~e~~~~g~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~LH~---~~ivHrDlkp~NIll~~~~~~~~~k  282 (419)
T 3i6u_A          212 -EDYYIVLELMEGGELFDKVVGN-----KRLKEATCKLYFYQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIK  282 (419)
T ss_dssp             -SEEEEEEECCTTCBGGGGTSSS-----CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESSSSSSCCEE
T ss_pred             -CceEEEEEcCCCCcHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEecCCCcceEE
Confidence             4579999999999999988654     348999999999999999999999   899999999999999654   4599


Q ss_pred             EEeecCcccccCCCCCcccccccCCcccCcccccc---CCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHH
Q 048419          476 LGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRT---GKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVK  552 (653)
Q Consensus       476 l~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~  552 (653)
                      |+|||+++.....  .......||+.|+|||++.+   ..++.++|||||||++|||++|+.||........  +.+.+.
T Consensus       283 l~DFG~a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~--~~~~i~  358 (419)
T 3i6u_A          283 ITDFGHSKILGET--SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS--LKDQIT  358 (419)
T ss_dssp             ECCSSTTTSCC-------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCC--HHHHHH
T ss_pred             EeecccceecCCC--ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHH--HHHHHh
Confidence            9999999876432  22344679999999999853   5678899999999999999999999975432111  111111


Q ss_pred             hhhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          553 ELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       553 ~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                      .... ....+..        ......+.+++.+||+.||.+||++.|++++-.
T Consensus       359 ~~~~-~~~~~~~--------~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~  402 (419)
T 3i6u_A          359 SGKY-NFIPEVW--------AEVSEKALDLVKKLLVVDPKARFTTEEALRHPW  402 (419)
T ss_dssp             TTCC-CCCHHHH--------TTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGG
T ss_pred             cCCC-CCCchhh--------cccCHHHHHHHHHHccCChhHCcCHHHHhCCcc
Confidence            1000 0000000        012467889999999999999999999998654

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=100.00  E-value=5.2e-40  Score=337.28  Aligned_cols=248  Identities=23%  Similarity=0.341  Sum_probs=207.0

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc---hhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS---QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVY  406 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  406 (653)
                      ++|...+.||+|+||.||+|....++..||||++....   ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus        14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   93 (284)
T 2vgo_A           14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLML   93 (284)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEE
Confidence            56888999999999999999999889999999985432   223567899999999999999999999999999999999


Q ss_pred             eccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccccc
Q 048419          407 DYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE  486 (653)
Q Consensus       407 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~  486 (653)
                      ||+++++|.+++...     ..+++..++.++.|+++||.|||+   ++++||||||+||+++.++.+||+|||++....
T Consensus        94 e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~  165 (284)
T 2vgo_A           94 EFAPRGELYKELQKH-----GRFDEQRSATFMEELADALHYCHE---RKVIHRDIKPENLLMGYKGELKIADFGWSVHAP  165 (284)
T ss_dssp             CCCTTEEHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECTTCCEEECCCTTCEECS
T ss_pred             EeCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEEcCCCCEEEecccccccCc
Confidence            999999999999754     348899999999999999999999   899999999999999999999999999997654


Q ss_pred             CCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhh
Q 048419          487 HGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQ  566 (653)
Q Consensus       487 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  566 (653)
                      ..   ......|++.|+|||.+.+..++.++||||||+++|||++|+.||.........   ..+..    .        
T Consensus       166 ~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~---~~~~~----~--------  227 (284)
T 2vgo_A          166 SL---RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETH---RRIVN----V--------  227 (284)
T ss_dssp             SS---CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHH---HHHHT----T--------
T ss_pred             cc---ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHH---HHHhc----c--------
Confidence            32   223457899999999999989999999999999999999999999765432211   10100    0        


Q ss_pred             ccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          567 TLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       567 ~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                      .. ..+......+.+++.+||+.||.+||++.|++++-
T Consensus       228 ~~-~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h~  264 (284)
T 2vgo_A          228 DL-KFPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEHP  264 (284)
T ss_dssp             CC-CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTCH
T ss_pred             cc-CCCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhhCH
Confidence            00 11112235688999999999999999999999854

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=100.00  E-value=2.5e-40  Score=349.53  Aligned_cols=253  Identities=21%  Similarity=0.312  Sum_probs=199.0

Q ss_pred             hcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC--chhhHHHHHHHHHHHhhcCC--CceeeeeeeecccceeEE
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLRH--RNLVQLHGWCRKQDELLL  404 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H--~niv~l~g~~~~~~~~~l  404 (653)
                      .++|+..+.||+|+||.||++... +++.||||++...  ..+..+.+.+|+.++++++|  +||+++++++...+..++
T Consensus         8 ~~~y~i~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~l   86 (343)
T 3dbq_A            8 GRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM   86 (343)
T ss_dssp             SCEEEEEEEESCCSSEEEEEEECT-TSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred             cCEEEEEEEEecCCCeEEEEEEeC-CCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEE
Confidence            456889999999999999999985 4889999998654  44456789999999999986  999999999999999999


Q ss_pred             EEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccc
Q 048419          405 VYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKI  484 (653)
Q Consensus       405 V~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~  484 (653)
                      ||| +.+++|.+++...     ..+++.+++.++.||+.||.|||+   ++|+||||||+|||++ ++.+||+|||+++.
T Consensus        87 v~e-~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~al~~lH~---~~iiHrDikp~NIll~-~~~~kl~DFG~a~~  156 (343)
T 3dbq_A           87 VME-CGNIDLNSWLKKK-----KSIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIV-DGMLKLIDFGIANQ  156 (343)
T ss_dssp             EEC-CCSEEHHHHHHHS-----CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEE-TTEEEECCCSSSCC
T ss_pred             EEe-CCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCcceEEEE-CCcEEEeecccccc
Confidence            999 5688999999764     348899999999999999999999   8999999999999997 67899999999987


Q ss_pred             ccCCCCC-cccccccCCcccCcccccc-----------CCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHH
Q 048419          485 YEHGANP-QTTHIVGTLGYLAPELTRT-----------GKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVK  552 (653)
Q Consensus       485 ~~~~~~~-~~~~~~gt~~y~aPE~~~~-----------~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~  552 (653)
                      ....... ......||+.|+|||++.+           ..++.++|||||||++|||++|+.||........        
T Consensus       157 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~--------  228 (343)
T 3dbq_A          157 MQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS--------  228 (343)
T ss_dssp             C------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHH--------
T ss_pred             cCcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHH--------
Confidence            6543222 2234579999999999865           6788999999999999999999999975332111        


Q ss_pred             hhhcccchhHhhhhcc-CcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          553 ELHLEGEITQAIDQTL-DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       553 ~~~~~~~~~~~~d~~l-~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                            .+...+++.. ..++......+.+++.+||+.||.+|||+.|++++...
T Consensus       229 ------~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~~  277 (343)
T 3dbq_A          229 ------KLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYV  277 (343)
T ss_dssp             ------HHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHH
T ss_pred             ------HHHHHhcCCcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhCccc
Confidence                  0111111111 11111223568899999999999999999999987653

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=100.00  E-value=2.6e-40  Score=352.92  Aligned_cols=244  Identities=26%  Similarity=0.312  Sum_probs=193.4

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc---hhhHHHHHHHHHH-HhhcCCCceeeeeeeecccceeEEE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS---QQGMKEFVAEIMS-MGRLRHRNLVQLHGWCRKQDELLLV  405 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~-l~~l~H~niv~l~g~~~~~~~~~lV  405 (653)
                      ++|+..+.||+|+||.||+|++..+++.||||++....   ....+.+..|..+ ++.++||||+++++++.+.+.+++|
T Consensus        38 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv  117 (373)
T 2r5t_A           38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFV  117 (373)
T ss_dssp             GGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEE
Confidence            56888999999999999999999999999999996542   2334556677776 5778999999999999999999999


Q ss_pred             EeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccc
Q 048419          406 YDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIY  485 (653)
Q Consensus       406 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~  485 (653)
                      |||+++|+|.+++...     ..+++..++.++.||+.||+|||+   ++|+||||||+|||++.++.+||+|||+++..
T Consensus       118 ~E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~ikL~DFG~a~~~  189 (373)
T 2r5t_A          118 LDYINGGELFYHLQRE-----RCFLEPRARFYAAEIASALGYLHS---LNIVYRDLKPENILLDSQGHIVLTDFGLCKEN  189 (373)
T ss_dssp             EECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCCBCGGG
T ss_pred             EeCCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEECCCCCEEEeeCcccccc
Confidence            9999999999999753     347888999999999999999999   99999999999999999999999999999864


Q ss_pred             cCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhh
Q 048419          486 EHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAID  565 (653)
Q Consensus       486 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d  565 (653)
                      ... .......+||+.|+|||++.+..++.++|||||||++|||++|+.||........   .+.+..            
T Consensus       190 ~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~---~~~i~~------------  253 (373)
T 2r5t_A          190 IEH-NSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEM---YDNILN------------  253 (373)
T ss_dssp             BCC-CCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHH---HHHHHH------------
T ss_pred             ccC-CCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHH---HHHHHh------------
Confidence            322 2233456899999999999999999999999999999999999999976543221   111111            


Q ss_pred             hccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHH
Q 048419          566 QTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMR  598 (653)
Q Consensus       566 ~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~  598 (653)
                      ..+ .++......+.+|+.+||+.||.+||++.
T Consensus       254 ~~~-~~~~~~~~~~~~li~~lL~~dp~~R~~~~  285 (373)
T 2r5t_A          254 KPL-QLKPNITNSARHLLEGLLQKDRTKRLGAK  285 (373)
T ss_dssp             SCC-CCCSSSCHHHHHHHHHHTCSSGGGSTTTT
T ss_pred             ccc-CCCCCCCHHHHHHHHHHcccCHHhCCCCC
Confidence            111 01112235688999999999999999985

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=100.00  E-value=8.1e-40  Score=339.12  Aligned_cols=252  Identities=25%  Similarity=0.386  Sum_probs=209.9

Q ss_pred             hcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc-hhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEe
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS-QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYD  407 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E  407 (653)
                      .+.|...+.||+|+||.||+|.+..+++.||||++.... ....+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus        21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  100 (303)
T 3a7i_A           21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME  100 (303)
T ss_dssp             GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEE
Confidence            356888999999999999999998889999999996543 4456789999999999999999999999999999999999


Q ss_pred             ccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccC
Q 048419          408 YVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEH  487 (653)
Q Consensus       408 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~  487 (653)
                      |+++++|.+++...      .+++.+++.++.|++.||.|||+   ++|+|+||||+||+++.++.+||+|||++.....
T Consensus       101 ~~~~~~L~~~~~~~------~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~  171 (303)
T 3a7i_A          101 YLGGGSALDLLEPG------PLDETQIATILREILKGLDYLHS---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTD  171 (303)
T ss_dssp             CCTTEEHHHHHTTS------CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECBT
T ss_pred             eCCCCcHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCChheEEECCCCCEEEeecccceecCc
Confidence            99999999998642      48999999999999999999999   8999999999999999999999999999987654


Q ss_pred             CCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhc
Q 048419          488 GANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQT  567 (653)
Q Consensus       488 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~  567 (653)
                      ... ......|++.|+|||.+.+..++.++||||||+++|||++|+.||.........   ..+..    ..     .+.
T Consensus       172 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~---~~~~~----~~-----~~~  238 (303)
T 3a7i_A          172 TQI-KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVL---FLIPK----NN-----PPT  238 (303)
T ss_dssp             TBC-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH---HHHHH----SC-----CCC
T ss_pred             ccc-ccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHH---HHhhc----CC-----CCC
Confidence            321 223457899999999999989999999999999999999999999765432211   11111    00     011


Q ss_pred             cCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          568 LDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       568 l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                      +   .......+.+++.+||+.||.+|||+.|++++..
T Consensus       239 ~---~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~  273 (303)
T 3a7i_A          239 L---EGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKF  273 (303)
T ss_dssp             C---CSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTCHH
T ss_pred             C---ccccCHHHHHHHHHHcCCChhhCcCHHHHhhChh
Confidence            1   1122356889999999999999999999998653

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=100.00  E-value=1.5e-40  Score=371.72  Aligned_cols=256  Identities=28%  Similarity=0.399  Sum_probs=208.3

Q ss_pred             hhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEe
Q 048419          328 VTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYD  407 (653)
Q Consensus       328 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E  407 (653)
                      ..++|...+.||+|+||.||+|.+.. +..||||++.... ...+.|.+|+++|++++|+||++++++|.+ +..+||||
T Consensus       265 ~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e  341 (535)
T 2h8h_A          265 PRESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTE  341 (535)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETT-TEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEC
T ss_pred             chhhhhhheecccCCCeEEEEEEECC-CceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeee
Confidence            34668889999999999999999975 5779999997543 335689999999999999999999999976 67899999


Q ss_pred             ccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccC
Q 048419          408 YVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEH  487 (653)
Q Consensus       408 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~  487 (653)
                      |+++|+|.++|....   ...+++.+++.++.||++||+|||+   ++|+||||||+|||++.++.+||+|||+++....
T Consensus       342 ~~~~gsL~~~l~~~~---~~~l~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~  415 (535)
T 2h8h_A          342 YMSKGSLLDFLKGET---GKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIED  415 (535)
T ss_dssp             CCTTEEHHHHHSHHH---HTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCC
T ss_pred             hhcCCcHHHHHhhcC---CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCHhhEEEcCCCcEEEcccccceecCC
Confidence            999999999997543   3458899999999999999999999   8999999999999999999999999999986543


Q ss_pred             CCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhh
Q 048419          488 GANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQ  566 (653)
Q Consensus       488 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  566 (653)
                      ..........++..|+|||.+....++.++|||||||+||||++ |+.||......+   +.+.+....           
T Consensus       416 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~---~~~~i~~~~-----------  481 (535)
T 2h8h_A          416 NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE---VLDQVERGY-----------  481 (535)
T ss_dssp             HHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHH---HHHHHHTTC-----------
T ss_pred             CceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH---HHHHHHcCC-----------
Confidence            21111222356788999999998999999999999999999999 899997654322   111111110           


Q ss_pred             ccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcCC
Q 048419          567 TLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLGD  607 (653)
Q Consensus       567 ~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  607 (653)
                      ++ ..+......+.+|+.+||+.||++|||+.+|+++|+..
T Consensus       482 ~~-~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~  521 (535)
T 2h8h_A          482 RM-PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY  521 (535)
T ss_dssp             CC-CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred             CC-CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence            00 11122346788999999999999999999999999864

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=100.00  E-value=5.7e-40  Score=338.36  Aligned_cols=254  Identities=27%  Similarity=0.375  Sum_probs=203.5

Q ss_pred             hcCcCcce-eeeeeCcEEEEEEE--eCCCCcEEEEEEeccCc--hhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeE
Q 048419          329 TKGFGEQN-LVGSGGFGRVYRGL--MPSLGLEVAIKRIGHNS--QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELL  403 (653)
Q Consensus       329 t~~f~~~~-~LG~G~fg~Vy~~~--~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~  403 (653)
                      .++|...+ .||+|+||.||+|.  ....++.||||++....  ....+.+.+|+.++++++||||+++++++ +.+..+
T Consensus        15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~   93 (291)
T 1xbb_A           15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWM   93 (291)
T ss_dssp             GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEE
T ss_pred             chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcE
Confidence            35677777 99999999999995  45567899999996542  33467899999999999999999999999 566789


Q ss_pred             EEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcc
Q 048419          404 LVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK  483 (653)
Q Consensus       404 lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~  483 (653)
                      +||||+++++|.+++...     ..+++.+++.++.||+.||.|||+   ++|+||||||+||+++.++.+||+|||+++
T Consensus        94 lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~  165 (291)
T 1xbb_A           94 LVMEMAELGPLNKYLQQN-----RHVKDKNIIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSK  165 (291)
T ss_dssp             EEEECCTTEEHHHHHHHC-----TTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCCTTCE
T ss_pred             EEEEeCCCCCHHHHHHhC-----cCCCHHHHHHHHHHHHHHHHHHHh---CCeEcCCCCcceEEEeCCCcEEEccCCcce
Confidence            999999999999999764     348899999999999999999999   899999999999999999999999999998


Q ss_pred             cccCCCCCc--ccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhhcccch
Q 048419          484 IYEHGANPQ--TTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELHLEGEI  560 (653)
Q Consensus       484 ~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~  560 (653)
                      .........  .....+++.|+|||.+.+..++.++||||||+++|||++ |+.||.......   +...+..    +..
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~---~~~~~~~----~~~  238 (291)
T 1xbb_A          166 ALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE---VTAMLEK----GER  238 (291)
T ss_dssp             ECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH---HHHHHHT----TCC
T ss_pred             eeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHH---HHHHHHc----CCC
Confidence            765433211  122346788999999988889999999999999999999 999998654322   1111111    100


Q ss_pred             hHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          561 TQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       561 ~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                              ...+......+.+++.+||+.||.+||++.++++.|+.
T Consensus       239 --------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~  276 (291)
T 1xbb_A          239 --------MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRN  276 (291)
T ss_dssp             --------CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred             --------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence                    01112234678899999999999999999999999864

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=100.00  E-value=1.4e-40  Score=356.08  Aligned_cols=247  Identities=15%  Similarity=0.143  Sum_probs=194.0

Q ss_pred             hhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC---chhhHHHHHHHH---HHHhhcCCCceeeee-------e
Q 048419          328 VTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN---SQQGMKEFVAEI---MSMGRLRHRNLVQLH-------G  394 (653)
Q Consensus       328 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~---~~l~~l~H~niv~l~-------g  394 (653)
                      ..++|...+.||+|+||.||+|.+..+|+.||||++...   .....+.+.+|+   +.+++++||||++++       +
T Consensus        71 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~  150 (377)
T 3byv_A           71 RPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFD  150 (377)
T ss_dssp             CCEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSE
T ss_pred             CCceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhh
Confidence            346788899999999999999999888999999999643   444567899999   556666899999998       4


Q ss_pred             eecccc-----------------eeEEEEeccCCCCchhhhhccccc--ccccchhhhHHHHHHHHHHHHHHHHhcCCCC
Q 048419          395 WCRKQD-----------------ELLLVYDYVPNGSLDKLLFDKDHK--LRKLLTWDQRYKILIGIAQSLLYLHEECNQR  455 (653)
Q Consensus       395 ~~~~~~-----------------~~~lV~E~~~~gsL~~~l~~~~~~--~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~  455 (653)
                      ++...+                 ..++||||+ +|+|.+++......  ....+++..++.++.||+.||+|||+   ++
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~  226 (377)
T 3byv_A          151 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH---YG  226 (377)
T ss_dssp             EEECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHH---TT
T ss_pred             hhhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHh---CC
Confidence            444432                 278999999 68999999764321  12356679999999999999999999   89


Q ss_pred             eEecCCCCCcEEEcCCCcEEEEeecCcccccCCCCCcccccccCCcccCccccccC-----------CCCCccceeehHH
Q 048419          456 VVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTG-----------KATTSTDVYSYGI  524 (653)
Q Consensus       456 ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~ksDV~s~Gv  524 (653)
                      |+||||||+|||++.++.+||+|||+++....    ......| +.|+|||++.+.           .++.++|||||||
T Consensus       227 ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~  301 (377)
T 3byv_A          227 LVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGL  301 (377)
T ss_dssp             EECSCCCGGGEEECTTCCEEECCGGGCEETTC----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHH
T ss_pred             eecCCCCHHHEEEcCCCCEEEEechhheecCC----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHH
Confidence            99999999999999999999999999985322    3344567 999999999887           8999999999999


Q ss_pred             HHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 048419          525 LMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEF  603 (653)
Q Consensus       525 vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  603 (653)
                      ++|||++|+.||.......               .. ..+.....    .....+.+|+.+||+.||.+||++.|++++
T Consensus       302 il~elltg~~Pf~~~~~~~---------------~~-~~~~~~~~----~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h  360 (377)
T 3byv_A          302 VIYWIWCADLPITKDAALG---------------GS-EWIFRSCK----NIPQPVRALLEGFLRYPKEDRLLPLQAMET  360 (377)
T ss_dssp             HHHHHHHSSCCC------C---------------CS-GGGGSSCC----CCCHHHHHHHHHHTCSSGGGCCCHHHHHTS
T ss_pred             HHHHHHHCCCCCccccccc---------------ch-hhhhhhcc----CCCHHHHHHHHHHcCCCchhCCCHHHHhhC
Confidence            9999999999997543211               00 11111111    123568899999999999999999999974

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.4e-39  Score=344.22  Aligned_cols=271  Identities=25%  Similarity=0.308  Sum_probs=204.2

Q ss_pred             HHhhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchh-----hHHHHHHHHHHHhhcCCCceeeeeeeecccc
Q 048419          326 ASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQ-----GMKEFVAEIMSMGRLRHRNLVQLHGWCRKQD  400 (653)
Q Consensus       326 ~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~  400 (653)
                      ....++|...+.||+|+||.||+|.+..+|+.||||++......     ..+.+.+|+.++++++||||+++++++...+
T Consensus         6 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~   85 (346)
T 1ua2_A            6 KSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKS   85 (346)
T ss_dssp             -------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTT
T ss_pred             HHHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCC
Confidence            44567899999999999999999999988999999998653221     1246789999999999999999999999999


Q ss_pred             eeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeec
Q 048419          401 ELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFG  480 (653)
Q Consensus       401 ~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG  480 (653)
                      ..++||||+++ +|.+++....    ..+++.+++.++.|+++||.|||+   ++|+||||||+|||++.++.+||+|||
T Consensus        86 ~~~lv~e~~~~-~l~~~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~kl~Dfg  157 (346)
T 1ua2_A           86 NISLVFDFMET-DLEVIIKDNS----LVLTPSHIKAYMLMTLQGLEYLHQ---HWILHRDLKPNNLLLDENGVLKLADFG  157 (346)
T ss_dssp             CCEEEEECCSE-EHHHHHTTCC----SSCCSSHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECCCG
T ss_pred             ceEEEEEcCCC-CHHHHHHhcC----cCCCHHHHHHHHHHHHHHHHHHHH---CCEECCCCCHHHEEEcCCCCEEEEecc
Confidence            99999999976 8888886542    458899999999999999999999   899999999999999999999999999


Q ss_pred             CcccccCCCCCcccccccCCcccCccccccC-CCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhc--c
Q 048419          481 LAKIYEHGANPQTTHIVGTLGYLAPELTRTG-KATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHL--E  557 (653)
Q Consensus       481 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~--~  557 (653)
                      +++...... .......||+.|+|||.+.+. .++.++|||||||++|||++|..||........  +.........  .
T Consensus       158 ~a~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~--~~~i~~~~~~~~~  234 (346)
T 1ua2_A          158 LAKSFGSPN-RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQ--LTRIFETLGTPTE  234 (346)
T ss_dssp             GGSTTTSCC-CCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHHHHHCCCCT
T ss_pred             cceeccCCc-ccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHH--HHHHHHHcCCCCh
Confidence            998764332 223345789999999998654 478999999999999999999999976554322  1111111110  0


Q ss_pred             cchhH---hhhhc----cCcCC-----HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcCC
Q 048419          558 GEITQ---AIDQT----LDYYD-----LAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLGD  607 (653)
Q Consensus       558 ~~~~~---~~d~~----l~~~~-----~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  607 (653)
                      ....+   ..+..    ....+     ......+.+|+.+||+.||.+|||+.|++++..-.
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~~f~  296 (346)
T 1ua2_A          235 EQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFS  296 (346)
T ss_dssp             TTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGGT
T ss_pred             hhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcChhhh
Confidence            00000   00000    00001     11236789999999999999999999999987643

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=100.00  E-value=4.2e-39  Score=343.11  Aligned_cols=261  Identities=22%  Similarity=0.357  Sum_probs=210.2

Q ss_pred             HHHHHHhhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCch--------hhHHHHHHHHHHHhhc-CCCceeee
Q 048419          322 YAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQ--------QGMKEFVAEIMSMGRL-RHRNLVQL  392 (653)
Q Consensus       322 ~~el~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l-~H~niv~l  392 (653)
                      +.......++|...+.||+|+||.||+|.+..+|+.||||++.....        ...+.+.+|+.+++++ +||||+++
T Consensus        86 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~  165 (365)
T 2y7j_A           86 WAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITL  165 (365)
T ss_dssp             HHHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCE
T ss_pred             chhhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEE
Confidence            34445666789999999999999999999988899999999865431        2245678999999999 79999999


Q ss_pred             eeeecccceeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCC
Q 048419          393 HGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYL  472 (653)
Q Consensus       393 ~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~  472 (653)
                      ++++...+..++||||+++++|.+++...     ..+++..++.++.||+.||.|||+   .+|+|+||||+|||++.++
T Consensus       166 ~~~~~~~~~~~lv~e~~~g~~L~~~l~~~-----~~l~~~~~~~i~~qi~~~L~~LH~---~gi~H~Dlkp~NIl~~~~~  237 (365)
T 2y7j_A          166 IDSYESSSFMFLVFDLMRKGELFDYLTEK-----VALSEKETRSIMRSLLEAVSFLHA---NNIVHRDLKPENILLDDNM  237 (365)
T ss_dssp             EEEEEBSSEEEEEECCCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTC
T ss_pred             EEEEeeCCEEEEEEEeCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCC
Confidence            99999999999999999999999999753     348999999999999999999999   8999999999999999999


Q ss_pred             cEEEEeecCcccccCCCCCcccccccCCcccCcccccc------CCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHH
Q 048419          473 NAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRT------GKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELL  546 (653)
Q Consensus       473 ~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~  546 (653)
                      .+||+|||++.......  ......||+.|+|||++.+      ..++.++|||||||++|||++|+.||.......   
T Consensus       238 ~ikl~DfG~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~---  312 (365)
T 2y7j_A          238 QIRLSDFGFSCHLEPGE--KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQIL---  312 (365)
T ss_dssp             CEEECCCTTCEECCTTC--CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH---
T ss_pred             CEEEEecCcccccCCCc--ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHH---
Confidence            99999999998765432  2344679999999999863      357889999999999999999999997644321   


Q ss_pred             HHHHHHhhhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          547 LVDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       547 l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                      ....+.........     +...    .....+.+++.+||+.||.+||++.|++++-
T Consensus       313 ~~~~i~~~~~~~~~-----~~~~----~~~~~~~~li~~~L~~dP~~Rps~~ell~hp  361 (365)
T 2y7j_A          313 MLRMIMEGQYQFSS-----PEWD----DRSSTVKDLISRLLQVDPEARLTAEQALQHP  361 (365)
T ss_dssp             HHHHHHHTCCCCCH-----HHHS----SSCHHHHHHHHHHSCSSTTTSCCHHHHHHSG
T ss_pred             HHHHHHhCCCCCCC-----cccc----cCCHHHHHHHHHHcCCChhHCcCHHHHhcCc
Confidence            11111111000000     0000    1135688999999999999999999999864

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=100.00  E-value=5.2e-40  Score=335.59  Aligned_cols=251  Identities=24%  Similarity=0.386  Sum_probs=199.7

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc---hhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS---QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVY  406 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  406 (653)
                      ++|...+.||+|+||.||+|.+..+++.||||++....   .+..+.+.+|+..+++++||||+++++++...+..++||
T Consensus        11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   90 (276)
T 2h6d_A           11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVM   90 (276)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             ccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEE
Confidence            57888999999999999999998889999999986432   234568899999999999999999999999999999999


Q ss_pred             eccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccccc
Q 048419          407 DYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE  486 (653)
Q Consensus       407 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~  486 (653)
                      ||+++++|.+++...     ..+++.+++.++.||+.||.|||+   ++++|+||||+||+++.++.+||+|||++....
T Consensus        91 e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~  162 (276)
T 2h6d_A           91 EYVSGGELFDYICKH-----GRVEEMEARRLFQQILSAVDYCHR---HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMS  162 (276)
T ss_dssp             ECCCSCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHH---HCSSCCCCCGGGEEECTTSCEEECCCCGGGCCC
T ss_pred             eccCCCcHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCChhhEEECCCCCEEEeecccccccC
Confidence            999999999999754     348899999999999999999999   899999999999999999999999999998764


Q ss_pred             CCCCCcccccccCCcccCccccccCCC-CCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhh
Q 048419          487 HGANPQTTHIVGTLGYLAPELTRTGKA-TTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAID  565 (653)
Q Consensus       487 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d  565 (653)
                      ...  ......|++.|+|||.+.+..+ +.++||||||+++|||++|+.||.......   +.+.+...           
T Consensus       163 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~---~~~~~~~~-----------  226 (276)
T 2h6d_A          163 DGE--FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPT---LFKKIRGG-----------  226 (276)
T ss_dssp             C---------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHHHHHHC-----------
T ss_pred             CCc--ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHH---HHHHhhcC-----------
Confidence            322  2233468999999999987765 589999999999999999999997643321   11111110           


Q ss_pred             hccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          566 QTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       566 ~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                        ....+......+.+++.+||+.||.+|||+.|++++-.-
T Consensus       227 --~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h~~~  265 (276)
T 2h6d_A          227 --VFYIPEYLNRSVATLLMHMLQVDPLKRATIKDIREHEWF  265 (276)
T ss_dssp             --CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHHH
T ss_pred             --cccCchhcCHHHHHHHHHHccCChhhCCCHHHHHhChhh
Confidence              000111123568899999999999999999999986543

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=100.00  E-value=4.8e-40  Score=348.63  Aligned_cols=261  Identities=16%  Similarity=0.155  Sum_probs=202.9

Q ss_pred             hcCcCcceeeeeeCcEEEEEEEeCC--------CCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceee---------
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGLMPS--------LGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQ---------  391 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~---------  391 (653)
                      .++|...+.||+|+||.||+|.+..        .++.||||++...     +.+.+|++++++++||||++         
T Consensus        41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~  115 (352)
T 2jii_A           41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTP  115 (352)
T ss_dssp             SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCT
T ss_pred             CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCC
Confidence            3678999999999999999999976        4789999998644     35789999999999999988         


Q ss_pred             ------eeeeecc-cceeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCC
Q 048419          392 ------LHGWCRK-QDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPS  464 (653)
Q Consensus       392 ------l~g~~~~-~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~  464 (653)
                            +++++.. .+..++||||+ +++|.+++....   ...+++.+++.++.||+.||.|||+   ++|+||||||+
T Consensus       116 ~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~---~~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dikp~  188 (352)
T 2jii_A          116 LLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSP---KHVLSERSVLQVACRLLDALEFLHE---NEYVHGNVTAE  188 (352)
T ss_dssp             TCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSG---GGCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCCGG
T ss_pred             ccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCC---cCCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCCHH
Confidence                  5666655 67889999999 999999998653   3568999999999999999999999   89999999999


Q ss_pred             cEEEcCCC--cEEEEeecCcccccCCCC------CcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCC
Q 048419          465 NILLDTYL--NAKLGDFGLAKIYEHGAN------PQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSI  536 (653)
Q Consensus       465 NIll~~~~--~~kl~DfGla~~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~  536 (653)
                      |||++.++  .+||+|||+++.......      .......||+.|+|||.+.+..++.++|||||||++|||++|+.||
T Consensus       189 NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf  268 (352)
T 2jii_A          189 NIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPW  268 (352)
T ss_dssp             GEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTT
T ss_pred             HEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCc
Confidence            99999998  999999999986643211      1123347899999999999989999999999999999999999999


Q ss_pred             ChhhhhhHHHHHHHHHhhhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          537 EPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       537 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                      ......... +........  .......+....  .......+.+++.+||+.||.+||++.+|++.|+.
T Consensus       269 ~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~  333 (352)
T 2jii_A          269 TNCLPNTED-IMKQKQKFV--DKPGPFVGPCGH--WIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEA  333 (352)
T ss_dssp             GGGTTCHHH-HHHHHHHHH--HSCCCEECTTSC--EECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHH
T ss_pred             ccCCcCHHH-HHHHHHhcc--CChhhhhhhccc--cCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHH
Confidence            875422211 111111110  000111111000  00123678899999999999999999999998864

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=100.00  E-value=6.2e-40  Score=353.47  Aligned_cols=270  Identities=21%  Similarity=0.273  Sum_probs=212.3

Q ss_pred             hcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc-hhhHHHHHHHHHHHhhcCCCceeeeeeeecccc--eeEEE
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS-QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQD--ELLLV  405 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~--~~~lV  405 (653)
                      .++|...++||+|+||.||+|.+..+++.||||++.... ....+.+.+|++++++++||||+++++++...+  ..++|
T Consensus         8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv   87 (396)
T 4eut_A            8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI   87 (396)
T ss_dssp             SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred             CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEE
Confidence            357888999999999999999999999999999997543 334677889999999999999999999987765  78999


Q ss_pred             EeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEE----cCCCcEEEEeecC
Q 048419          406 YDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILL----DTYLNAKLGDFGL  481 (653)
Q Consensus       406 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll----~~~~~~kl~DfGl  481 (653)
                      |||+++|+|.+++.....  ...+++.+++.++.||+.||.|||+   ++|+||||||+|||+    +.++.+||+|||+
T Consensus        88 ~e~~~~g~L~~~l~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~  162 (396)
T 4eut_A           88 MEFCPCGSLYTVLEEPSN--AYGLPESEFLIVLRDVVGGMNHLRE---NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGA  162 (396)
T ss_dssp             ECCCTTEEHHHHTTSGGG--TTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEECTTSCEEEEECCGGG
T ss_pred             EecCCCCCHHHHHHhhhc--ccCCCHHHHHHHHHHHHHHHHHHHH---CCEEECCcCHHHEEEeecCCCceeEEEecCCC
Confidence            999999999999976542  2348999999999999999999999   899999999999999    7888899999999


Q ss_pred             cccccCCCCCcccccccCCcccCcccccc--------CCCCCccceeehHHHHHHHHhCCCCCChhhhhh--HHHHHHHH
Q 048419          482 AKIYEHGANPQTTHIVGTLGYLAPELTRT--------GKATTSTDVYSYGILMLEVACGRRSIEPQKAAA--ELLLVDWV  551 (653)
Q Consensus       482 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~--~~~l~~~~  551 (653)
                      ++......  ......||+.|+|||++..        ..++.++|||||||++|||++|+.||.......  ...+....
T Consensus       163 a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~  240 (396)
T 4eut_A          163 ARELEDDE--QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKII  240 (396)
T ss_dssp             CEECCCGG--GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHH
T ss_pred             ceEccCCC--ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHh
Confidence            98764322  2234579999999998865        467889999999999999999999997533211  11111111


Q ss_pred             HhhhcccchhHh---hh------hcc---CcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          552 KELHLEGEITQA---ID------QTL---DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       552 ~~~~~~~~~~~~---~d------~~l---~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                      ... ....+...   ..      ..+   ..........+.+++.+||+.||++||++.|+++.+..
T Consensus       241 ~~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~  306 (396)
T 4eut_A          241 TGK-PSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSD  306 (396)
T ss_dssp             HSC-CTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHH
T ss_pred             cCC-CcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHH
Confidence            111 00000000   00      001   12345677889999999999999999999999988754

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=100.00  E-value=4.9e-40  Score=353.43  Aligned_cols=252  Identities=20%  Similarity=0.307  Sum_probs=199.2

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC--chhhHHHHHHHHHHHhhcC--CCceeeeeeeecccceeEEE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLR--HRNLVQLHGWCRKQDELLLV  405 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~--H~niv~l~g~~~~~~~~~lV  405 (653)
                      ++|...+.||+|+||.||+|.+.. ++.||||++...  ..+..+.+.+|+.++++++  |+||+++++++...+.+++|
T Consensus        56 ~~y~~~~~LG~G~fg~Vy~~~~~~-~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv  134 (390)
T 2zmd_A           56 RIYSILKQIGSGGSSKVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV  134 (390)
T ss_dssp             EEEEEEEEEECCSSEEEEEEECTT-CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred             CceEEEEEEccCCCeEEEEEEcCC-CCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEE
Confidence            458899999999999999999875 899999998654  3455678999999999996  59999999999999999999


Q ss_pred             EeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccc
Q 048419          406 YDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIY  485 (653)
Q Consensus       406 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~  485 (653)
                      || +.+++|.+++....     .+++.+++.++.||+.||.|||+   ++|+||||||+|||++ ++.+||+|||+++..
T Consensus       135 ~E-~~~~~L~~~l~~~~-----~~~~~~~~~i~~qi~~aL~~lH~---~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~  204 (390)
T 2zmd_A          135 ME-CGNIDLNSWLKKKK-----SIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIV-DGMLKLIDFGIANQM  204 (390)
T ss_dssp             EE-CCSEEHHHHHHHCS-----SCCHHHHHHHHHHHHHHHHHHHT---TTCCCCCCCGGGEEES-SSCEEECCCSSSCCC
T ss_pred             Ee-cCCCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHEEEE-CCeEEEEecCccccc
Confidence            99 56889999997643     47888999999999999999999   8999999999999995 588999999999876


Q ss_pred             cCCCCC-cccccccCCcccCcccccc-----------CCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHh
Q 048419          486 EHGANP-QTTHIVGTLGYLAPELTRT-----------GKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKE  553 (653)
Q Consensus       486 ~~~~~~-~~~~~~gt~~y~aPE~~~~-----------~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~  553 (653)
                      ...... ......||+.|+|||++.+           ..++.++|||||||++|||++|+.||........ .+      
T Consensus       205 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~-~~------  277 (390)
T 2zmd_A          205 QPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS-KL------  277 (390)
T ss_dssp             ---------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHH-HH------
T ss_pred             cCCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHH-HH------
Confidence            443221 2234579999999999865           3688999999999999999999999975432111 01      


Q ss_pred             hhcccchhHhhhhcc-CcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          554 LHLEGEITQAIDQTL-DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       554 ~~~~~~~~~~~d~~l-~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                             ...+++.. ...+......+.+|+.+||+.||.+||++.|++++...
T Consensus       278 -------~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~  324 (390)
T 2zmd_A          278 -------HAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYV  324 (390)
T ss_dssp             -------HHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHH
T ss_pred             -------HHHhCccccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhhCcCc
Confidence                   11111111 01111123568899999999999999999999987643

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=100.00  E-value=3.7e-40  Score=350.45  Aligned_cols=264  Identities=24%  Similarity=0.339  Sum_probs=208.5

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC-chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEec
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN-SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDY  408 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~  408 (653)
                      ++|...+.||+|+||.||+|.+..++..||+|++... .....+.+.+|+.++++++||||+++++++...+..++||||
T Consensus        33 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  112 (360)
T 3eqc_A           33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH  112 (360)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             ccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEEC
Confidence            5788899999999999999999989999999999765 344567899999999999999999999999999999999999


Q ss_pred             cCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCC-CeEecCCCCCcEEEcCCCcEEEEeecCcccccC
Q 048419          409 VPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQ-RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEH  487 (653)
Q Consensus       409 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~-~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~  487 (653)
                      +++++|.+++...     ..+++..+..++.|++.||.|||+   + +|+||||||+|||++.++.+||+|||++.....
T Consensus       113 ~~~~~L~~~l~~~-----~~~~~~~~~~i~~~i~~~l~~lh~---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~  184 (360)
T 3eqc_A          113 MDGGSLDQVLKKA-----GRIPEQILGKVSIAVIKGLTYLRE---KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID  184 (360)
T ss_dssp             CTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---HHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHH
T ss_pred             CCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---hCCEEcCCccHHHEEECCCCCEEEEECCCCccccc
Confidence            9999999999764     348899999999999999999998   5 899999999999999999999999999975532


Q ss_pred             CCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHH-----------------
Q 048419          488 GANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDW-----------------  550 (653)
Q Consensus       488 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~-----------------  550 (653)
                      .   ......||+.|+|||++.+..++.++|||||||++|||++|+.||..............                 
T Consensus       185 ~---~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (360)
T 3eqc_A          185 S---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPG  261 (360)
T ss_dssp             H---C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC------------------
T ss_pred             c---cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCC
Confidence            2   12335789999999999999999999999999999999999999976543321111000                 


Q ss_pred             ------HHhhhcccchhHhhhhcc-----CcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          551 ------VKELHLEGEITQAIDQTL-----DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       551 ------~~~~~~~~~~~~~~d~~l-----~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                            ...........+.++...     ..........+.+++.+||+.||.+|||+.|++++-
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp  326 (360)
T 3eqc_A          262 RPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHA  326 (360)
T ss_dssp             ------------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSH
T ss_pred             CcccccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhCh
Confidence                  000000001111111111     001111245789999999999999999999999855

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2.5e-40  Score=351.22  Aligned_cols=257  Identities=23%  Similarity=0.323  Sum_probs=205.0

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeC---CCCcEEEEEEeccCc----hhhHHHHHHHHHHHhhc-CCCceeeeeeeecccce
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMP---SLGLEVAIKRIGHNS----QQGMKEFVAEIMSMGRL-RHRNLVQLHGWCRKQDE  401 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~---~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~  401 (653)
                      ++|...+.||+|+||.||+|...   .+++.||||++....    ....+.+.+|+++++++ +|+||+++++++...+.
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~  133 (355)
T 1vzo_A           54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK  133 (355)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred             cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCce
Confidence            57888999999999999999984   468999999986432    22345677899999999 69999999999999999


Q ss_pred             eEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecC
Q 048419          402 LLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGL  481 (653)
Q Consensus       402 ~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl  481 (653)
                      .++||||+++++|.+++...     ..+++.+++.++.||++||.|||+   ++|+||||||+|||++.++.+||+|||+
T Consensus       134 ~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~DfG~  205 (355)
T 1vzo_A          134 LHLILDYINGGELFTHLSQR-----ERFTEHEVQIYVGEIVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGL  205 (355)
T ss_dssp             EEEEECCCCSCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEESCSSE
T ss_pred             EEEEeecCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCcEEEeeCCC
Confidence            99999999999999999754     348899999999999999999999   8999999999999999999999999999


Q ss_pred             cccccCCCCCcccccccCCcccCcccccc--CCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccc
Q 048419          482 AKIYEHGANPQTTHIVGTLGYLAPELTRT--GKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGE  559 (653)
Q Consensus       482 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~  559 (653)
                      ++..............||+.|+|||++.+  ..++.++|||||||++|||++|+.||.........  ........    
T Consensus       206 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~--~~~~~~~~----  279 (355)
T 1vzo_A          206 SKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQ--AEISRRIL----  279 (355)
T ss_dssp             EEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCH--HHHHHHHH----
T ss_pred             CeecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchH--HHHHHHHh----
Confidence            98664333333344679999999999985  34788999999999999999999999754321111  01111100    


Q ss_pred             hhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCC-----CHHHHHHHHcC
Q 048419          560 ITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRP-----DMRRVVEFLLG  606 (653)
Q Consensus       560 ~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~L~~  606 (653)
                            .....++......+.+|+.+||+.||.+||     ++.|++++...
T Consensus       280 ------~~~~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f  325 (355)
T 1vzo_A          280 ------KSEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFF  325 (355)
T ss_dssp             ------HCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGG
T ss_pred             ------ccCCCCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcch
Confidence                  001111222345688999999999999999     99999988754

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=100.00  E-value=4.4e-40  Score=345.09  Aligned_cols=257  Identities=27%  Similarity=0.401  Sum_probs=204.9

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEE--EEEEeccC-chhhHHHHHHHHHHHhhc-CCCceeeeeeeecccceeEEE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEV--AIKRIGHN-SQQGMKEFVAEIMSMGRL-RHRNLVQLHGWCRKQDELLLV  405 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~v--avK~~~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV  405 (653)
                      ++|...+.||+|+||.||+|.+..++..+  |||.+... .....+.+.+|+++++++ +||||+++++++.+.+..++|
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv  104 (327)
T 1fvr_A           25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA  104 (327)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred             HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence            57888999999999999999988777755  99998653 344556789999999999 899999999999999999999


Q ss_pred             EeccCCCCchhhhhcccc-----------cccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcE
Q 048419          406 YDYVPNGSLDKLLFDKDH-----------KLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNA  474 (653)
Q Consensus       406 ~E~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~  474 (653)
                      |||+++++|.+++.....           .....+++.+++.++.||++||.|||+   ++|+||||||+|||++.++.+
T Consensus       105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIl~~~~~~~  181 (327)
T 1fvr_A          105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVA  181 (327)
T ss_dssp             ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECGGGCE
T ss_pred             EecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCccceEEEcCCCeE
Confidence            999999999999976531           112468999999999999999999999   999999999999999999999


Q ss_pred             EEEeecCcccccCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHh
Q 048419          475 KLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKE  553 (653)
Q Consensus       475 kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~  553 (653)
                      ||+|||+++.....  .......+++.|+|||.+.+..++.++|||||||++|||++ |+.||.......   +.+.   
T Consensus       182 kL~Dfg~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~---~~~~---  253 (327)
T 1fvr_A          182 KIADFGLSRGQEVY--VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE---LYEK---  253 (327)
T ss_dssp             EECCTTCEESSCEE--CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH---HHHH---
T ss_pred             EEcccCcCcccccc--ccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHH---HHHH---
Confidence            99999999743321  12223456889999999988889999999999999999998 999997654321   1111   


Q ss_pred             hhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          554 LHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       554 ~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                       ...+.        ....+......+.+++.+||+.||.+|||+.|+++.|+.
T Consensus       254 -~~~~~--------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~  297 (327)
T 1fvr_A          254 -LPQGY--------RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNR  297 (327)
T ss_dssp             -GGGTC--------CCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             -hhcCC--------CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence             11110        001112234678899999999999999999999998864

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=100.00  E-value=2.2e-39  Score=341.48  Aligned_cols=271  Identities=24%  Similarity=0.336  Sum_probs=211.1

Q ss_pred             CCcccCHHHHHHhhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhh--cCCCceeeee
Q 048419          316 GARRFKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGR--LRHRNLVQLH  393 (653)
Q Consensus       316 ~~~~f~~~el~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~H~niv~l~  393 (653)
                      .....+........++|...+.||+|+||.||+|.+.  ++.||||++...   ..+.+..|.+++..  ++||||++++
T Consensus        28 ~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~  102 (342)
T 1b6c_B           28 SGSGLPLLVQRTIARTIVLQESIGKGRFGEVWRGKWR--GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFI  102 (342)
T ss_dssp             CCSSSCHHHHHHHHHHCEEEEEEEEETTEEEEEEEET--TEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEE
T ss_pred             CCCCCceeecccccccEEEEeeecCCCCcEEEEEEEc--CccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEE
Confidence            3445555556677889999999999999999999984  889999998543   34567788888887  7899999999


Q ss_pred             eeecccc----eeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHH--------hcCCCCeEecCC
Q 048419          394 GWCRKQD----ELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLH--------EECNQRVVHRDV  461 (653)
Q Consensus       394 g~~~~~~----~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH--------~~~~~~ivH~Dl  461 (653)
                      +++...+    ..++||||+++|+|.+++...      .+++.+++.++.|++.||.|||        +   ++|+||||
T Consensus       103 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~---~~ivH~Dl  173 (342)
T 1b6c_B          103 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY------TVTVEGMIKLALSTASGLAHLHMEIVGTQGK---PAIAHRDL  173 (342)
T ss_dssp             EEEECCCSSCCCEEEEECCCTTCBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCB---CEEECSCC
T ss_pred             eeecccCCccceeEEEEeecCCCcHHHHHhcc------CccHHHHHHHHHHHHHHHHHHHHHHhhhccc---CCeeeCCC
Confidence            9998776    789999999999999999653      3899999999999999999999        6   89999999


Q ss_pred             CCCcEEEcCCCcEEEEeecCcccccCCCCC---cccccccCCcccCccccccC------CCCCccceeehHHHHHHHHhC
Q 048419          462 KPSNILLDTYLNAKLGDFGLAKIYEHGANP---QTTHIVGTLGYLAPELTRTG------KATTSTDVYSYGILMLEVACG  532 (653)
Q Consensus       462 kp~NIll~~~~~~kl~DfGla~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~------~~~~ksDV~s~Gvvl~elltG  532 (653)
                      ||+|||++.++.+||+|||+++........   ......||+.|+|||.+.+.      .++.++|||||||++|||++|
T Consensus       174 kp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg  253 (342)
T 1b6c_B          174 KSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARR  253 (342)
T ss_dssp             SGGGEEECTTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CHHHEEECCCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhc
Confidence            999999999999999999999876543321   12345789999999998765      234689999999999999999


Q ss_pred             ----------CCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhcc--CcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHH
Q 048419          533 ----------RRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTL--DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRV  600 (653)
Q Consensus       533 ----------~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l--~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev  600 (653)
                                +.||........ ....+.... ....    ..+.+  ..........+.+|+.+||+.||.+|||+.||
T Consensus       254 ~~~~~~~~~~~~p~~~~~~~~~-~~~~~~~~~-~~~~----~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i  327 (342)
T 1b6c_B          254 CSIGGIHEDYQLPYYDLVPSDP-SVEEMRKVV-CEQK----LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRI  327 (342)
T ss_dssp             BCBTTBCCCCCCTTTTTSCSSC-CHHHHHHHH-TTSC----CCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHH
T ss_pred             cCcCCcccccccCccccCcCcc-cHHHHHHHH-HHHH----hCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHH
Confidence                      677765322110 000111110 0000    01111  01123566789999999999999999999999


Q ss_pred             HHHHcC
Q 048419          601 VEFLLG  606 (653)
Q Consensus       601 l~~L~~  606 (653)
                      +++|+.
T Consensus       328 ~~~L~~  333 (342)
T 1b6c_B          328 KKTLSQ  333 (342)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            999964

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=100.00  E-value=4.4e-40  Score=345.63  Aligned_cols=255  Identities=24%  Similarity=0.286  Sum_probs=190.6

Q ss_pred             hhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcC-CCceeeeeeee--------cc
Q 048419          328 VTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLR-HRNLVQLHGWC--------RK  398 (653)
Q Consensus       328 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~--------~~  398 (653)
                      ...+|+..++||+|+||.||+|.+..+++.||||++........+.+.+|+.+++++. ||||+++++++        ..
T Consensus        26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~  105 (337)
T 3ll6_A           26 GELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTG  105 (337)
T ss_dssp             TTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTS
T ss_pred             cCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccC
Confidence            3457888999999999999999998889999999997777777788999999999996 99999999998        34


Q ss_pred             cceeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCC--eEecCCCCCcEEEcCCCcEEE
Q 048419          399 QDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQR--VVHRDVKPSNILLDTYLNAKL  476 (653)
Q Consensus       399 ~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~--ivH~Dlkp~NIll~~~~~~kl  476 (653)
                      ...+++||||+. |+|.+++.....  ...+++.+++.++.||+.||.|||+   ++  |+||||||+|||++.++.+||
T Consensus       106 ~~~~~lv~e~~~-g~L~~~l~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~---~~~~ivH~Dikp~NIl~~~~~~~kl  179 (337)
T 3ll6_A          106 QAEFLLLTELCK-GQLVEFLKKMES--RGPLSCDTVLKIFYQTCRAVQHMHR---QKPPIIHRDLKVENLLLSNQGTIKL  179 (337)
T ss_dssp             SEEEEEEEECCS-EEHHHHHHHHHT--TCSCCHHHHHHHHHHHHHHHHHHHT---SSSCCBCCCCCGGGCEECTTSCEEB
T ss_pred             CceEEEEEEecC-CCHHHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHh---CCCCEEEccCCcccEEECCCCCEEE
Confidence            456899999995 799998865322  3458999999999999999999999   78  999999999999999999999


Q ss_pred             EeecCcccccCCCCC-----------cccccccCCcccCcccc---ccCCCCCccceeehHHHHHHHHhCCCCCChhhhh
Q 048419          477 GDFGLAKIYEHGANP-----------QTTHIVGTLGYLAPELT---RTGKATTSTDVYSYGILMLEVACGRRSIEPQKAA  542 (653)
Q Consensus       477 ~DfGla~~~~~~~~~-----------~~~~~~gt~~y~aPE~~---~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~  542 (653)
                      +|||+++........           ......||+.|+|||.+   .+..++.++|||||||++|||++|+.||......
T Consensus       180 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~  259 (337)
T 3ll6_A          180 CDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKL  259 (337)
T ss_dssp             CCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC------
T ss_pred             ecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHH
Confidence            999999876543211           11134589999999998   5667889999999999999999999999754321


Q ss_pred             hHHHHHHHHHhhhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          543 AELLLVDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       543 ~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                      .      ........            .........+.+|+.+||+.||.+||++.|++++|+.
T Consensus       260 ~------~~~~~~~~------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~  305 (337)
T 3ll6_A          260 R------IVNGKYSI------------PPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQE  305 (337)
T ss_dssp             ------------CCC------------CTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHH
T ss_pred             H------hhcCcccC------------CcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence            1      00000000            0001112347789999999999999999999999965

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=100.00  E-value=3.9e-40  Score=346.01  Aligned_cols=268  Identities=24%  Similarity=0.338  Sum_probs=199.0

Q ss_pred             HHhhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc--hhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeE
Q 048419          326 ASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS--QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELL  403 (653)
Q Consensus       326 ~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~  403 (653)
                      ....++|...+.||+|+||.||+|.+..+++.||||++....  ....+.+.+|+.++++++||||+++++++.+.+..+
T Consensus        30 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  109 (329)
T 3gbz_A           30 ATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLH  109 (329)
T ss_dssp             --CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEE
T ss_pred             ccchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEE
Confidence            344568999999999999999999999999999999996543  223457789999999999999999999999999999


Q ss_pred             EEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEE-----cCCCcEEEEe
Q 048419          404 LVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILL-----DTYLNAKLGD  478 (653)
Q Consensus       404 lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll-----~~~~~~kl~D  478 (653)
                      +||||++ |+|.+++....     .+++.+++.++.||+.||.|||+   ++|+||||||+|||+     +.++.+||+|
T Consensus       110 lv~e~~~-~~L~~~~~~~~-----~~~~~~~~~i~~ql~~~l~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~~kl~D  180 (329)
T 3gbz_A          110 LIFEYAE-NDLKKYMDKNP-----DVSMRVIKSFLYQLINGVNFCHS---RRCLHRDLKPQNLLLSVSDASETPVLKIGD  180 (329)
T ss_dssp             EEEECCS-EEHHHHHHHCT-----TCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEC-----CCEEEECC
T ss_pred             EEEecCC-CCHHHHHhhcC-----CCCHHHHHHHHHHHHHHHHHHHh---CCEECCCCCHHHEEEecCCCCccceEEECc
Confidence            9999997 59999987643     48999999999999999999999   899999999999999     4555699999


Q ss_pred             ecCcccccCCCCCcccccccCCcccCccccccC-CCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhc-
Q 048419          479 FGLAKIYEHGANPQTTHIVGTLGYLAPELTRTG-KATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHL-  556 (653)
Q Consensus       479 fGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~-  556 (653)
                      ||+++...... .......||+.|+|||++.+. .++.++|||||||++|||++|+.||.........  ......... 
T Consensus       181 fg~a~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~--~~~~~~~~~~  257 (329)
T 3gbz_A          181 FGLARAFGIPI-RQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQL--FKIFEVLGLP  257 (329)
T ss_dssp             TTHHHHHC------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH--HHHHHHHCCC
T ss_pred             CCCccccCCcc-cccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHH--HHHHHHhCCC
Confidence            99998764332 223345689999999999774 4899999999999999999999999865543321  111111100 


Q ss_pred             -ccchhHhh-----hhcc---CcCCHH------HHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          557 -EGEITQAI-----DQTL---DYYDLA------EAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       557 -~~~~~~~~-----d~~l---~~~~~~------~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                       ........     ....   ......      ....+.+|+.+||+.||.+|||+.|++++-.
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~  321 (329)
T 3gbz_A          258 DDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPY  321 (329)
T ss_dssp             CTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGG
T ss_pred             chhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCCcc
Confidence             00000000     0000   000011      2367889999999999999999999998654

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=100.00  E-value=6.2e-40  Score=346.24  Aligned_cols=255  Identities=22%  Similarity=0.315  Sum_probs=203.7

Q ss_pred             hhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhc-CCCceeeeeeeecccceeEEEE
Q 048419          328 VTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRL-RHRNLVQLHGWCRKQDELLLVY  406 (653)
Q Consensus       328 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~  406 (653)
                      ..++|...+.||+|+||.||+|.+..+++.||||++.....    ...+|++++.++ +||||+++++++.+.+..++||
T Consensus        20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~   95 (342)
T 2qr7_A           20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVT   95 (342)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEE
T ss_pred             ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEE
Confidence            45678999999999999999999999999999999965433    234688888888 7999999999999999999999


Q ss_pred             eccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCC----CcEEEEeecCc
Q 048419          407 DYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTY----LNAKLGDFGLA  482 (653)
Q Consensus       407 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~----~~~kl~DfGla  482 (653)
                      ||+++|+|.+++...     ..+++.+++.++.||+.||.|||+   ++|+||||||+|||+..+    +.+||+|||++
T Consensus        96 E~~~gg~L~~~i~~~-----~~~~~~~~~~~~~qi~~al~~lH~---~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a  167 (342)
T 2qr7_A           96 ELMKGGELLDKILRQ-----KFFSEREASAVLFTITKTVEYLHA---QGVVHRDLKPSNILYVDESGNPESIRICDFGFA  167 (342)
T ss_dssp             CCCCSCBHHHHHHTC-----TTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESSSSCSGGGEEECCCTTC
T ss_pred             eCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCcEeccCCHHHEEEecCCCCcCeEEEEECCCc
Confidence            999999999998764     348999999999999999999999   899999999999998433    35999999999


Q ss_pred             ccccCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhH
Q 048419          483 KIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQ  562 (653)
Q Consensus       483 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~  562 (653)
                      +....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||..........+...+..    +... 
T Consensus       168 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~----~~~~-  241 (342)
T 2qr7_A          168 KQLRAENG-LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGS----GKFS-  241 (342)
T ss_dssp             EECBCTTC-CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHH----CCCC-
T ss_pred             ccCcCCCC-ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHcc----CCcc-
Confidence            87654322 23345789999999999887889999999999999999999999975432211111111111    1100 


Q ss_pred             hhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          563 AIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       563 ~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                          ............+.+|+.+||+.||.+||++.|++++-
T Consensus       242 ----~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~hp  279 (342)
T 2qr7_A          242 ----LSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHP  279 (342)
T ss_dssp             ----CCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSH
T ss_pred             ----cCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCC
Confidence                00011112346788999999999999999999999854

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=100.00  E-value=2.8e-39  Score=332.92  Aligned_cols=250  Identities=25%  Similarity=0.369  Sum_probs=202.3

Q ss_pred             CcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC--chhhHHHHHHHHHHHhhcCCCceeeeeeeecc----cceeEE
Q 048419          331 GFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRK----QDELLL  404 (653)
Q Consensus       331 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~----~~~~~l  404 (653)
                      .|...+.||+|+||.||+|.+..++..||+|.+...  .....+.+.+|+.++++++||||+++++++..    ...+++
T Consensus        27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l  106 (290)
T 1t4h_A           27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL  106 (290)
T ss_dssp             EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEE
T ss_pred             eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEE
Confidence            367788999999999999999999999999998643  44556789999999999999999999998765    356899


Q ss_pred             EEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCC--eEecCCCCCcEEEc-CCCcEEEEeecC
Q 048419          405 VYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQR--VVHRDVKPSNILLD-TYLNAKLGDFGL  481 (653)
Q Consensus       405 V~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~--ivH~Dlkp~NIll~-~~~~~kl~DfGl  481 (653)
                      ||||+++++|.+++...     ..+++..++.++.||+.||.|||+   ++  |+||||||+|||++ .++.+||+|||+
T Consensus       107 v~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~---~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~  178 (290)
T 1t4h_A          107 VTELMTSGTLKTYLKRF-----KVMKIKVLRSWCRQILKGLQFLHT---RTPPIIHRDLKCDNIFITGPTGSVKIGDLGL  178 (290)
T ss_dssp             EEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHT---SSSCCCCSCCCGGGEEESSTTSCEEECCTTG
T ss_pred             EEEecCCCCHHHHHHHc-----cCCCHHHHHHHHHHHHHHHHHHHc---CCCCEEECCCCHHHEEEECCCCCEEEeeCCC
Confidence            99999999999999653     348899999999999999999999   77  99999999999997 889999999999


Q ss_pred             cccccCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchh
Q 048419          482 AKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEIT  561 (653)
Q Consensus       482 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~  561 (653)
                      +......   ......||+.|+|||.+. +.++.++|||||||++|||++|+.||.........  ...+.    .+...
T Consensus       179 ~~~~~~~---~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~--~~~~~----~~~~~  248 (290)
T 1t4h_A          179 ATLKRAS---FAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQI--YRRVT----SGVKP  248 (290)
T ss_dssp             GGGCCTT---SBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHH--HHHHT----TTCCC
T ss_pred             ccccccc---ccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHH--HHHHh----ccCCc
Confidence            9754332   233457899999999886 46899999999999999999999999764432211  11111    11111


Q ss_pred             HhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          562 QAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       562 ~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                      ...+.       .....+.+++.+||+.||.+|||+.|++++-.
T Consensus       249 ~~~~~-------~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~  285 (290)
T 1t4h_A          249 ASFDK-------VAIPEVKEIIEGCIRQNKDERYSIKDLLNHAF  285 (290)
T ss_dssp             GGGGG-------CCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGG
T ss_pred             cccCC-------CCCHHHHHHHHHHccCChhhCCCHHHHhhCcc
Confidence            11111       11256889999999999999999999998643

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=100.00  E-value=1.1e-39  Score=337.20  Aligned_cols=255  Identities=23%  Similarity=0.340  Sum_probs=199.7

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCC---CcEEEEEEeccC-chhhHHHHHHHHHHHhhcCCCceeeeeeeec-ccceeEE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSL---GLEVAIKRIGHN-SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR-KQDELLL  404 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~---~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~-~~~~~~l  404 (653)
                      .+|...+.||+|+||.||+|.+..+   ...+|+|.+... .....+.+.+|+.++++++||||++++++|. ..+..++
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~  104 (298)
T 3f66_A           25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV  104 (298)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred             eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEE
Confidence            4577889999999999999997543   346899998754 3445678999999999999999999999865 4557899


Q ss_pred             EEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccc
Q 048419          405 VYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKI  484 (653)
Q Consensus       405 V~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~  484 (653)
                      ||||+++|+|.+++....    ..+++.+++.++.|+++||.|||+   ++|+||||||+||+++.++.+||+|||+++.
T Consensus       105 v~e~~~~~~L~~~l~~~~----~~~~~~~~~~i~~ql~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~  177 (298)
T 3f66_A          105 VLPYMKHGDLRNFIRNET----HNPTVKDLIGFGLQVAKGMKYLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARD  177 (298)
T ss_dssp             EEECCTTCBHHHHHHCTT----CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTCCEEECSCGGGCC
T ss_pred             EEeCCCCCCHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCchheEEECCCCCEEECccccccc
Confidence            999999999999997643    457899999999999999999999   8999999999999999999999999999986


Q ss_pred             ccCCCC---CcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCC-CCCChhhhhhHHHHHHHHHhhhcccch
Q 048419          485 YEHGAN---PQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGR-RSIEPQKAAAELLLVDWVKELHLEGEI  560 (653)
Q Consensus       485 ~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~-~p~~~~~~~~~~~l~~~~~~~~~~~~~  560 (653)
                      ......   .......+|+.|+|||.+.+..++.++||||||+++|||++|+ .|+.......   ....+...      
T Consensus       178 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~---~~~~~~~~------  248 (298)
T 3f66_A          178 MYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD---ITVYLLQG------  248 (298)
T ss_dssp             CSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTT---HHHHHHTT------
T ss_pred             ccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHH---HHHHHhcC------
Confidence            543221   1223346788999999999999999999999999999999955 5554332211   11111110      


Q ss_pred             hHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          561 TQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       561 ~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                            .....+......+.+++.+||+.||.+|||+.|+++.|+.
T Consensus       249 ------~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~  288 (298)
T 3f66_A          249 ------RRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISA  288 (298)
T ss_dssp             ------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             ------CCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence                  0001111123568899999999999999999999999864

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=4.7e-40  Score=351.25  Aligned_cols=254  Identities=23%  Similarity=0.368  Sum_probs=193.2

Q ss_pred             CcCcceeeeeeCcEEEEEEEeCCC---CcEEEEEEeccC-chhhHHHHHHHHHHHhhcCCCceeeeeeeecc-cceeEEE
Q 048419          331 GFGEQNLVGSGGFGRVYRGLMPSL---GLEVAIKRIGHN-SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRK-QDELLLV  405 (653)
Q Consensus       331 ~f~~~~~LG~G~fg~Vy~~~~~~~---~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~-~~~~~lV  405 (653)
                      .|...+.||+|+||.||+|.+...   +..||||.+... .....+.+.+|+.++++++||||++++++|.+ .+..++|
T Consensus        90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv  169 (373)
T 3c1x_A           90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV  169 (373)
T ss_dssp             EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred             eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence            356678999999999999987432   346899998654 34567789999999999999999999998755 4578999


Q ss_pred             EeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccc
Q 048419          406 YDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIY  485 (653)
Q Consensus       406 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~  485 (653)
                      |||+++|+|.+++....    ..+++.+++.++.||++||.|||+   ++|+||||||+|||++.++.+||+|||+++..
T Consensus       170 ~e~~~~g~L~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~  242 (373)
T 3c1x_A          170 LPYMKHGDLRNFIRNET----HNPTVKDLIGFGLQVAKGMKFLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDM  242 (373)
T ss_dssp             EECCTTCBHHHHHHCTT----CCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCC------
T ss_pred             EECCCCCCHHHHHhhcc----cCCCHHHHHHHHHHHHHHHHHHHH---CCEecCccchheEEECCCCCEEEeeccccccc
Confidence            99999999999997643    347899999999999999999999   89999999999999999999999999999865


Q ss_pred             cCCCCC---cccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhhcccchh
Q 048419          486 EHGANP---QTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELHLEGEIT  561 (653)
Q Consensus       486 ~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~  561 (653)
                      ......   ......+|+.|+|||.+.+..++.++|||||||++|||++ |..||......+   ....+..    +.  
T Consensus       243 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~---~~~~~~~----~~--  313 (373)
T 3c1x_A          243 YDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD---ITVYLLQ----GR--  313 (373)
T ss_dssp             ---------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSC---HHHHHHT----TC--
T ss_pred             cccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHH---HHHHHHc----CC--
Confidence            432211   1233457789999999999999999999999999999999 666776443221   1111111    10  


Q ss_pred             HhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          562 QAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       562 ~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                            ....+......+.+++.+||+.||.+||++.|+++.|+.
T Consensus       314 ------~~~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~  352 (373)
T 3c1x_A          314 ------RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISA  352 (373)
T ss_dssp             ------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             ------CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence                  001111234578899999999999999999999999965

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.1e-39  Score=347.84  Aligned_cols=263  Identities=24%  Similarity=0.293  Sum_probs=201.6

Q ss_pred             hhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC--chhhHHHHHHHHHHHhhcCCCceeeeeeeecccc-----
Q 048419          328 VTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQD-----  400 (653)
Q Consensus       328 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~-----  400 (653)
                      ..++|...+.||+|+||.||+|.+..+|+.||||++...  .....+.+.+|+.++++++||||+++++++...+     
T Consensus        23 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~  102 (367)
T 1cm8_A           23 VRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDF  102 (367)
T ss_dssp             CBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTC
T ss_pred             ecceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccC
Confidence            346789999999999999999999989999999998543  3344577899999999999999999999987653     


Q ss_pred             -eeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEee
Q 048419          401 -ELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDF  479 (653)
Q Consensus       401 -~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df  479 (653)
                       .+++||||+ +++|.+++...      .+++..+..++.||++||.|||+   ++|+||||||+|||++.++.+||+||
T Consensus       103 ~~~~lv~e~~-~~~L~~~~~~~------~l~~~~~~~~~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Df  172 (367)
T 1cm8_A          103 TDFYLVMPFM-GTDLGKLMKHE------KLGEDRIQFLVYQMLKGLRYIHA---AGIIHRDLKPGNLAVNEDCELKILDF  172 (367)
T ss_dssp             CCCEEEEECC-SEEHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCC
T ss_pred             ceEEEEEecC-CCCHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHH---CCccccCcCHHHEEEcCCCCEEEEee
Confidence             469999999 88999998652      38899999999999999999999   89999999999999999999999999


Q ss_pred             cCcccccCCCCCcccccccCCcccCcccccc-CCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhh---
Q 048419          480 GLAKIYEHGANPQTTHIVGTLGYLAPELTRT-GKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELH---  555 (653)
Q Consensus       480 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~---  555 (653)
                      |+++.....    .....+|+.|+|||++.+ ..++.++||||+||+++||++|+.||...........  .+....   
T Consensus       173 g~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~--i~~~~g~~~  246 (367)
T 1cm8_A          173 GLARQADSE----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKE--IMKVTGTPP  246 (367)
T ss_dssp             TTCEECCSS----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH--HHHHHCCCC
T ss_pred             ecccccccc----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH--HHHhcCCCC
Confidence            999875432    334578999999999877 6799999999999999999999999986554332111  111000   


Q ss_pred             -------cccchhHhhhh-------ccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          556 -------LEGEITQAIDQ-------TLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       556 -------~~~~~~~~~d~-------~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                             ........+..       .+..........+.+|+.+||+.||.+|||+.|++++-..
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f  311 (367)
T 1cm8_A          247 AEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYF  311 (367)
T ss_dssp             HHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGG
T ss_pred             HHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcChHH
Confidence                   00000000000       0001111234678899999999999999999999997543

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=100.00  E-value=1.4e-39  Score=357.59  Aligned_cols=269  Identities=24%  Similarity=0.251  Sum_probs=189.9

Q ss_pred             hcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC--chhhHHHHHHHHHHHhhcCCCceeeeeeeecc-----cce
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRK-----QDE  401 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~-----~~~  401 (653)
                      .++|...+.||+|+||.||+|.+..+++.||||++...  .....+.+.+|+.+|++++||||+++++++..     ...
T Consensus        52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~  131 (458)
T 3rp9_A           52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE  131 (458)
T ss_dssp             CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred             CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence            46899999999999999999999989999999999653  34456789999999999999999999999843     357


Q ss_pred             eEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecC
Q 048419          402 LLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGL  481 (653)
Q Consensus       402 ~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl  481 (653)
                      +++||||+ +++|.+++...     ..+++..++.++.||+.||.|||+   ++|+||||||+||||+.++.+||+|||+
T Consensus       132 ~~lv~e~~-~~~L~~~~~~~-----~~l~~~~~~~~~~qi~~aL~~LH~---~~iiHrDlKp~NILl~~~~~~kl~DFGl  202 (458)
T 3rp9_A          132 LYVVLEIA-DSDFKKLFRTP-----VYLTELHIKTLLYNLLVGVKYVHS---AGILHRDLKPANCLVNQDCSVKVCDFGL  202 (458)
T ss_dssp             EEEEECCC-SEEHHHHHHSS-----CCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTCCEEECCCTT
T ss_pred             EEEEEecc-ccchhhhcccC-----CCCCHHHHHHHHHHHHHHHHHHHh---CCcCCCCCChhhEEECCCCCEeeccccc
Confidence            89999998 57899988653     348999999999999999999999   8999999999999999999999999999


Q ss_pred             cccccCCCC--------------------------CcccccccCCcccCcccc-ccCCCCCccceeehHHHHHHHHh---
Q 048419          482 AKIYEHGAN--------------------------PQTTHIVGTLGYLAPELT-RTGKATTSTDVYSYGILMLEVAC---  531 (653)
Q Consensus       482 a~~~~~~~~--------------------------~~~~~~~gt~~y~aPE~~-~~~~~~~ksDV~s~Gvvl~ellt---  531 (653)
                      ++.......                          ......+||+.|+|||++ ....++.++|||||||++|||++   
T Consensus       203 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~  282 (458)
T 3rp9_A          203 ARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIK  282 (458)
T ss_dssp             CBCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTST
T ss_pred             chhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhcc
Confidence            987643211                          123445789999999976 55679999999999999999999   


Q ss_pred             --------CCCCCChhhhh-----------------hHHHHHHHHHhhhcccc-----------hhHhhhhc-------c
Q 048419          532 --------GRRSIEPQKAA-----------------AELLLVDWVKELHLEGE-----------ITQAIDQT-------L  568 (653)
Q Consensus       532 --------G~~p~~~~~~~-----------------~~~~l~~~~~~~~~~~~-----------~~~~~d~~-------l  568 (653)
                              |+.+|.+....                 ........+........           ....+...       +
T Consensus       283 ~~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  362 (458)
T 3rp9_A          283 ENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDL  362 (458)
T ss_dssp             TTCSSGGGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCG
T ss_pred             ccccccccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCH
Confidence                    45555332210                 00000001110000000           00000000       0


Q ss_pred             CcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          569 DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       569 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                      ..........+.+|+.+||+.||.+|||+.|++++-..
T Consensus       363 ~~~~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~Hp~f  400 (458)
T 3rp9_A          363 AERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFF  400 (458)
T ss_dssp             GGGSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGG
T ss_pred             HHHCCCCCHHHHHHHHHHhccCccccCCHHHHhcCHhh
Confidence            00011224678899999999999999999999997643

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=100.00  E-value=2.9e-39  Score=351.79  Aligned_cols=273  Identities=20%  Similarity=0.280  Sum_probs=208.9

Q ss_pred             hhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhc------CCCceeeeeeeecccce
Q 048419          328 VTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRL------RHRNLVQLHGWCRKQDE  401 (653)
Q Consensus       328 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l------~H~niv~l~g~~~~~~~  401 (653)
                      ...+|...+.||+|+||.||+|.+..+++.||||++... ....+.+.+|+.+++.+      +|+||+++++++...+.
T Consensus        95 ~~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~  173 (429)
T 3kvw_A           95 VAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNH  173 (429)
T ss_dssp             ETTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTE
T ss_pred             ccCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCe
Confidence            345788999999999999999999999999999999653 33456777888888887      57799999999999999


Q ss_pred             eEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCc--EEEEee
Q 048419          402 LLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLN--AKLGDF  479 (653)
Q Consensus       402 ~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~--~kl~Df  479 (653)
                      .++||||+. ++|.+++....   ...+++..++.++.||+.||+|||+   ++|+||||||+||||+.++.  +||+||
T Consensus       174 ~~lv~e~~~-~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlKp~NILl~~~~~~~vkL~DF  246 (429)
T 3kvw_A          174 ICMTFELLS-MNLYELIKKNK---FQGFSLPLVRKFAHSILQCLDALHK---NRIIHCDLKPENILLKQQGRSGIKVIDF  246 (429)
T ss_dssp             EEEEECCCC-CBHHHHHHHTT---TCCCCHHHHHHHHHHHHHHHHHHHH---HTEECSCCSGGGEEESSTTSCCEEECCC
T ss_pred             EEEEEeccC-CCHHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEEccCCCcceEEeec
Confidence            999999996 69999887654   2458999999999999999999999   89999999999999999887  999999


Q ss_pred             cCcccccCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcc--
Q 048419          480 GLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLE--  557 (653)
Q Consensus       480 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~--  557 (653)
                      |+++.....    .....||+.|+|||++.+..++.++|||||||++|||++|+.||......+...  ..+......  
T Consensus       247 G~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~--~i~~~~~~p~~  320 (429)
T 3kvw_A          247 GSSCYEHQR----VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLA--CMIELLGMPSQ  320 (429)
T ss_dssp             TTCEETTCC----CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH--HHHHHHCCCCH
T ss_pred             ccceecCCc----ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHH--HHHHHcCCCCH
Confidence            999764332    234578999999999999999999999999999999999999998765433221  111110000  


Q ss_pred             ------cchhHhhhhc---------------------------c----CcCCH------HHHHHHHHHHHHcCCCCCCCC
Q 048419          558 ------GEITQAIDQT---------------------------L----DYYDL------AEAELVLNLGLFCSAPNPVYR  594 (653)
Q Consensus       558 ------~~~~~~~d~~---------------------------l----~~~~~------~~~~~l~~l~~~Cl~~dP~~R  594 (653)
                            ......++..                           +    .....      .....+.+|+.+||+.||.+|
T Consensus       321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~R  400 (429)
T 3kvw_A          321 KLLDASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVR  400 (429)
T ss_dssp             HHHHTBTTHHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTS
T ss_pred             HHHHhhhhhhhccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhC
Confidence                  0000000000                           0    00000      113668899999999999999


Q ss_pred             CCHHHHHHHHcCCCCCCCCC
Q 048419          595 PDMRRVVEFLLGDSSLPPLP  614 (653)
Q Consensus       595 Ps~~evl~~L~~~~~~p~~p  614 (653)
                      ||+.|++++-.-....|..|
T Consensus       401 pta~e~L~Hpw~~~~~~~~~  420 (429)
T 3kvw_A          401 MTPGQALRHPWLRRRLPKPP  420 (429)
T ss_dssp             CCHHHHHTSTTTC-------
T ss_pred             CCHHHHhCChhhccCCCCCC
Confidence            99999999876655554433

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=100.00  E-value=9.3e-40  Score=340.27  Aligned_cols=265  Identities=22%  Similarity=0.335  Sum_probs=200.6

Q ss_pred             HHHHhhcCcCcceeeeeeCcEEEEEEEeCC---CCcEEEEEEeccC--chhhHHHHHHHHHHHhhcCCCceeeeeeeecc
Q 048419          324 ELASVTKGFGEQNLVGSGGFGRVYRGLMPS---LGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRK  398 (653)
Q Consensus       324 el~~at~~f~~~~~LG~G~fg~Vy~~~~~~---~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~  398 (653)
                      ++....++|...+.||+|+||.||+|....   ++..||||++...  .....+.+.+|+.++++++||||+++++++.+
T Consensus        28 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~  107 (313)
T 3brb_A           28 DVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIE  107 (313)
T ss_dssp             TTBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC
T ss_pred             hcccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEee
Confidence            333455778889999999999999998754   4568999998654  34456789999999999999999999999977


Q ss_pred             cc-----eeEEEEeccCCCCchhhhhcccc-cccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCC
Q 048419          399 QD-----ELLLVYDYVPNGSLDKLLFDKDH-KLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYL  472 (653)
Q Consensus       399 ~~-----~~~lV~E~~~~gsL~~~l~~~~~-~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~  472 (653)
                      .+     ..++||||+++++|.+++..... .....+++.+++.++.||++||.|||+   ++|+||||||+||+++.++
T Consensus       108 ~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dikp~NIli~~~~  184 (313)
T 3brb_A          108 MSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSN---RNFLHRDLAARNCMLRDDM  184 (313)
T ss_dssp             -------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHT---TTCCCCCCSGGGEEECTTS
T ss_pred             ccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCcceEEEcCCC
Confidence            65     35999999999999999854321 113568999999999999999999999   8999999999999999999


Q ss_pred             cEEEEeecCcccccCCCC-CcccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHH
Q 048419          473 NAKLGDFGLAKIYEHGAN-PQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDW  550 (653)
Q Consensus       473 ~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~  550 (653)
                      .+||+|||+++....... .......+++.|+|||.+.+..++.++||||||+++|||++ |+.||........   .+.
T Consensus       185 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~---~~~  261 (313)
T 3brb_A          185 TVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEM---YDY  261 (313)
T ss_dssp             CEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH---HHH
T ss_pred             cEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHH---HHH
Confidence            999999999986643321 22233457889999999999999999999999999999999 8888876543221   111


Q ss_pred             HHhhhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          551 VKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       551 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                      +....            ...........+.+++.+||+.||.+||++.+++++|+.
T Consensus       262 ~~~~~------------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~  305 (313)
T 3brb_A          262 LLHGH------------RLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEK  305 (313)
T ss_dssp             HHTTC------------CCCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHcCC------------CCCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence            11100            001111234678899999999999999999999999964

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=100.00  E-value=1.4e-39  Score=346.71  Aligned_cols=256  Identities=14%  Similarity=0.117  Sum_probs=204.2

Q ss_pred             HHHhhcCcCcceeeeeeCcEEEEEEE-----eCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcC---CCceeeeeeee
Q 048419          325 LASVTKGFGEQNLVGSGGFGRVYRGL-----MPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLR---HRNLVQLHGWC  396 (653)
Q Consensus       325 l~~at~~f~~~~~LG~G~fg~Vy~~~-----~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---H~niv~l~g~~  396 (653)
                      +....++|...+.||+|+||.||+|.     ...+++.||||++....   ..++..|++++++++   |+||+++++++
T Consensus        60 ~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~e~~~~~~l~~~~~~~iv~~~~~~  136 (365)
T 3e7e_A           60 FQLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN---PWEFYIGTQLMERLKPSMQHMFMKFYSAH  136 (365)
T ss_dssp             EECSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC---HHHHHHHHHHHHHSCGGGGGGBCCEEEEE
T ss_pred             EEECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC---hhHHHHHHHHHHHhhhhhhhhhhhhheee
Confidence            33445779999999999999999994     55678999999996554   345667777777775   99999999999


Q ss_pred             cccceeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcC------
Q 048419          397 RKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDT------  470 (653)
Q Consensus       397 ~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~------  470 (653)
                      ...+..++|||||++|+|.+++..........+++.+++.++.||++||+|||+   ++|+||||||+||||+.      
T Consensus       137 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~---~~ivHrDiKp~NIll~~~~~~~~  213 (365)
T 3e7e_A          137 LFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHD---CEIIHGDIKPDNFILGNGFLEQD  213 (365)
T ss_dssp             ECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECGGGTCC-
T ss_pred             ecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhh---CCeecCCCCHHHEEecccccCcc
Confidence            999999999999999999999976433224569999999999999999999999   89999999999999988      


Q ss_pred             -----CCcEEEEeecCcccccCC-CCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhH
Q 048419          471 -----YLNAKLGDFGLAKIYEHG-ANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAE  544 (653)
Q Consensus       471 -----~~~~kl~DfGla~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~  544 (653)
                           ++.+||+|||+++.+... .........||+.|+|||++.+..++.++|||||||++|||+||+.||....... 
T Consensus       214 ~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~-  292 (365)
T 3e7e_A          214 DEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGE-  292 (365)
T ss_dssp             -----CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTE-
T ss_pred             ccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCc-
Confidence                 899999999999765422 2223345679999999999999999999999999999999999999996543210 


Q ss_pred             HHHHHHHHhhhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCC-CCHHHHHHHHcC
Q 048419          545 LLLVDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYR-PDMRRVVEFLLG  606 (653)
Q Consensus       545 ~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~R-Ps~~evl~~L~~  606 (653)
                                   ..    +...+...  ...+.+.+++..|++.+|.+| |+++++.+.|+.
T Consensus       293 -------------~~----~~~~~~~~--~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~  336 (365)
T 3e7e_A          293 -------------CK----PEGLFRRL--PHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKK  336 (365)
T ss_dssp             -------------EE----ECSCCTTC--SSHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHH
T ss_pred             -------------ee----echhcccc--CcHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHH
Confidence                         00    11111111  124567789999999999998 678877777754

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=100.00  E-value=1e-39  Score=370.46  Aligned_cols=247  Identities=26%  Similarity=0.397  Sum_probs=198.8

Q ss_pred             eeeeeCcEEEEEEEeC--CCCcEEEEEEeccC-chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEeccCCCC
Q 048419          337 LVGSGGFGRVYRGLMP--SLGLEVAIKRIGHN-SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGS  413 (653)
Q Consensus       337 ~LG~G~fg~Vy~~~~~--~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gs  413 (653)
                      .||+|+||.||+|.+.  .++..||||+++.. .....+.+.+|+++|++++||||++++++|.. +.+++||||+++|+
T Consensus       343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~  421 (613)
T 2ozo_A          343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP  421 (613)
T ss_dssp             EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred             EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence            7999999999999875  34677999999764 34467889999999999999999999999976 56899999999999


Q ss_pred             chhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCCCCc-
Q 048419          414 LDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQ-  492 (653)
Q Consensus       414 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~-  492 (653)
                      |.+++...    ...+++.+++.++.||+.||+|||+   ++|+||||||+||||+.++.+||+|||+++......... 
T Consensus       422 L~~~l~~~----~~~l~~~~~~~i~~qi~~~L~~LH~---~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~  494 (613)
T 2ozo_A          422 LHKFLVGK----REEIPVSNVAELLHQVSMGMKYLEE---KNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYT  494 (613)
T ss_dssp             HHHHHTTC----TTTSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC-------
T ss_pred             HHHHHhhc----cCCCCHHHHHHHHHHHHHHHHHHHH---CCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceee
Confidence            99999654    3458999999999999999999999   899999999999999999999999999998764332211 


Q ss_pred             -ccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhccCc
Q 048419          493 -TTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDY  570 (653)
Q Consensus       493 -~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~  570 (653)
                       .....+++.|+|||++.+..++.++|||||||++|||++ |+.||......+   +.+.+..    +.       . ..
T Consensus       495 ~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~---~~~~i~~----~~-------~-~~  559 (613)
T 2ozo_A          495 ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE---VMAFIEQ----GK-------R-ME  559 (613)
T ss_dssp             -------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHH---HHHHHHT----TC-------C-CC
T ss_pred             eccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHH---HHHHHHc----CC-------C-CC
Confidence             122345689999999998999999999999999999998 999998654432   1111111    11       0 01


Q ss_pred             CCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          571 YDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       571 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                      .+......+.+|+.+||+.||.+||++.+|++.|+.
T Consensus       560 ~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~  595 (613)
T 2ozo_A          560 CPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRA  595 (613)
T ss_dssp             CCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHH
T ss_pred             CCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence            122345678999999999999999999999998864

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=100.00  E-value=4.5e-39  Score=337.54  Aligned_cols=258  Identities=21%  Similarity=0.253  Sum_probs=202.5

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcC-CCceeeeeeeecc--cceeEEEE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLR-HRNLVQLHGWCRK--QDELLLVY  406 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~--~~~~~lV~  406 (653)
                      ++|+..+.||+|+||.||+|.+..+++.||||++....   .+.+.+|+.++++++ ||||+++++++.+  ....++||
T Consensus        36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~  112 (330)
T 3nsz_A           36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF  112 (330)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCC---HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEE
T ss_pred             CceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccc---hHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEE
Confidence            67888999999999999999998899999999996433   467889999999997 9999999999987  56789999


Q ss_pred             eccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCC-cEEEEeecCcccc
Q 048419          407 DYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYL-NAKLGDFGLAKIY  485 (653)
Q Consensus       407 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~-~~kl~DfGla~~~  485 (653)
                      ||+++++|.+++..        +++.+++.++.||+.||+|||+   ++|+||||||+|||++.++ .+||+|||+++..
T Consensus       113 e~~~~~~l~~~~~~--------~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~  181 (330)
T 3nsz_A          113 EHVNNTDFKQLYQT--------LTDYDIRFYMYEILKALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFY  181 (330)
T ss_dssp             ECCCCCCHHHHGGG--------CCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred             eccCchhHHHHHHh--------CCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEc
Confidence            99999999988732        7788999999999999999999   8999999999999999776 8999999999876


Q ss_pred             cCCCCCcccccccCCcccCcccccc-CCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhh
Q 048419          486 EHGANPQTTHIVGTLGYLAPELTRT-GKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAI  564 (653)
Q Consensus       486 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  564 (653)
                      ....  ......|+..|+|||.+.+ ..++.++|||||||++|||++|+.||......... +...... .......+.+
T Consensus       182 ~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~-l~~~~~~-~~~~~~~~~~  257 (330)
T 3nsz_A          182 HPGQ--EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQ-LVRIAKV-LGTEDLYDYI  257 (330)
T ss_dssp             CTTC--CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHH-HHHHHHH-HCHHHHHHHH
T ss_pred             CCCC--ccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHH-HHHHHHh-cCCchhhhHH
Confidence            5432  2234578999999999877 66899999999999999999999999543322111 1111110 0001111111


Q ss_pred             hhc-----------------------c-CcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          565 DQT-----------------------L-DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       565 d~~-----------------------l-~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                      +..                       . ..........+.+|+.+||+.||.+|||+.|++++-.
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~  322 (330)
T 3nsz_A          258 DKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPY  322 (330)
T ss_dssp             HHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTSGG
T ss_pred             HHhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcCcc
Confidence            100                       0 0001113467899999999999999999999998654

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=100.00  E-value=1.9e-39  Score=359.90  Aligned_cols=254  Identities=23%  Similarity=0.334  Sum_probs=202.7

Q ss_pred             hhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc--hhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEE
Q 048419          328 VTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS--QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLV  405 (653)
Q Consensus       328 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV  405 (653)
                      ..++|...+.||+|+||.||+|.+..++..||||++....  ......+.+|+.++++++||||++++++|.+.+..++|
T Consensus        35 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv  114 (494)
T 3lij_A           35 LSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLV  114 (494)
T ss_dssp             HHHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hhcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence            3457888999999999999999999899999999996542  33456789999999999999999999999999999999


Q ss_pred             EeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCC---CcEEEEeecCc
Q 048419          406 YDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTY---LNAKLGDFGLA  482 (653)
Q Consensus       406 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~---~~~kl~DfGla  482 (653)
                      ||||++|+|.+++...     ..+++.+++.++.||+.||.|||+   ++|+||||||+|||++..   +.+||+|||++
T Consensus       115 ~e~~~~g~L~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a  186 (494)
T 3lij_A          115 MECYKGGELFDEIIHR-----MKFNEVDAAVIIKQVLSGVTYLHK---HNIVHRDLKPENLLLESKEKDALIKIVDFGLS  186 (494)
T ss_dssp             EECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred             EecCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCChhhEEEeCCCCCCcEEEEECCCC
Confidence            9999999999988654     348899999999999999999999   899999999999999764   45999999999


Q ss_pred             ccccCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhH
Q 048419          483 KIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQ  562 (653)
Q Consensus       483 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~  562 (653)
                      +......  ......||+.|+|||++. ..++.++||||+||++|||++|+.||.......   +...+........   
T Consensus       187 ~~~~~~~--~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~---~~~~i~~~~~~~~---  257 (494)
T 3lij_A          187 AVFENQK--KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQE---ILRKVEKGKYTFD---  257 (494)
T ss_dssp             EECBTTB--CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHHHHHHTCCCCC---
T ss_pred             eECCCCc--cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHhCCCCCC---
Confidence            8765432  234457999999999986 569999999999999999999999998654432   1111111100000   


Q ss_pred             hhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          563 AIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       563 ~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                        .+...    .....+.+++.+||+.||.+|||+.|++++-
T Consensus       258 --~~~~~----~~s~~~~~li~~~L~~dp~~R~s~~e~l~hp  293 (494)
T 3lij_A          258 --SPEWK----NVSEGAKDLIKQMLQFDSQRRISAQQALEHP  293 (494)
T ss_dssp             --SGGGT----TSCHHHHHHHHHHTCSSTTTSCCHHHHHTCH
T ss_pred             --chhcc----cCCHHHHHHHHHHCCCChhhCccHHHHhcCc
Confidence              00001    1235688999999999999999999999753

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=100.00  E-value=1.1e-39  Score=343.15  Aligned_cols=263  Identities=22%  Similarity=0.348  Sum_probs=192.4

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHH--HHHHHhhcCCCceeeeeeee-----ccccee
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVA--EIMSMGRLRHRNLVQLHGWC-----RKQDEL  402 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~--E~~~l~~l~H~niv~l~g~~-----~~~~~~  402 (653)
                      ++|...+.||+|+||.||+|..  +++.||||++.....   ..+..  |+..+..++|+||+++++++     .....+
T Consensus        13 ~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~---~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~   87 (336)
T 3g2f_A           13 DNLKLLELIGRGRYGAVYKGSL--DERPVAVKVFSFANR---QNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEY   87 (336)
T ss_dssp             TSEEEEEEEEECSSEEEEEEEE--TTEEEEEEEEEGGGH---HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred             HHhheeeecccCCCeEEEEEEE--CCeEEEEEEeeccch---hhHHHHHHHHHHHhccCcchhhheecccccccCCCceE
Confidence            5788899999999999999987  478999999964432   33344  44445568999999999744     333467


Q ss_pred             EEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCC---------CeEecCCCCCcEEEcCCCc
Q 048419          403 LLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQ---------RVVHRDVKPSNILLDTYLN  473 (653)
Q Consensus       403 ~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~---------~ivH~Dlkp~NIll~~~~~  473 (653)
                      ++||||+++|+|.+++....      .++..+++++.||++||.|||+   +         +|+||||||+|||++.++.
T Consensus        88 ~lv~e~~~~g~L~~~l~~~~------~~~~~~~~i~~qi~~~L~~LH~---~~~~~~~~~~~ivH~Dikp~Nill~~~~~  158 (336)
T 3g2f_A           88 LLVMEYYPNGSLXKYLSLHT------SDWVSSCRLAHSVTRGLAYLHT---ELPRGDHYKPAISHRDLNSRNVLVKNDGT  158 (336)
T ss_dssp             EEEECCCTTCBHHHHHHHCC------BCHHHHHHHHHHHHHHHHHHHC---CBCCGGGCBCCEECSSCSGGGEEECTTSC
T ss_pred             EEEEecCCCCcHHHHHhhcc------cchhHHHHHHHHHHHHHHHHHh---hhccccccccceeecccccceEEEcCCCc
Confidence            99999999999999996543      5888999999999999999999   6         9999999999999999999


Q ss_pred             EEEEeecCcccccCCC-------CCcccccccCCcccCcccccc-------CCCCCccceeehHHHHHHHHhCCCCCChh
Q 048419          474 AKLGDFGLAKIYEHGA-------NPQTTHIVGTLGYLAPELTRT-------GKATTSTDVYSYGILMLEVACGRRSIEPQ  539 (653)
Q Consensus       474 ~kl~DfGla~~~~~~~-------~~~~~~~~gt~~y~aPE~~~~-------~~~~~ksDV~s~Gvvl~elltG~~p~~~~  539 (653)
                      +||+|||+++......       ........||+.|+|||++.+       ..++.++|||||||++|||++|+.|+...
T Consensus       159 ~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~  238 (336)
T 3g2f_A          159 CVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPG  238 (336)
T ss_dssp             EEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTT
T ss_pred             EEEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCc
Confidence            9999999998764321       112224469999999999976       35677999999999999999998776543


Q ss_pred             hhhhHH--HHHHHHHhhhcccchhHhhh-----hcc-C--cCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          540 KAAAEL--LLVDWVKELHLEGEITQAID-----QTL-D--YYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       540 ~~~~~~--~l~~~~~~~~~~~~~~~~~d-----~~l-~--~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                      ......  ..............+...+.     +.+ .  .........+.+|+.+||+.||.+|||+.|+++.|+.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~  315 (336)
T 3g2f_A          239 ESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAE  315 (336)
T ss_dssp             SCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHH
T ss_pred             cchhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHH
Confidence            221100  00000000000000000000     011 0  1122356789999999999999999999999998864

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=100.00  E-value=5.3e-40  Score=337.88  Aligned_cols=256  Identities=23%  Similarity=0.289  Sum_probs=190.9

Q ss_pred             hcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc--hhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEE
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS--QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVY  406 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  406 (653)
                      .++|+..+.||+|+||.||+|.+..+++.||||++....  ....+.+.++...++.++||||+++++++.+.+..++||
T Consensus         6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~   85 (290)
T 3fme_A            6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM   85 (290)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred             HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence            467889999999999999999998889999999996542  222334455566688899999999999999999999999


Q ss_pred             eccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCC-CeEecCCCCCcEEEcCCCcEEEEeecCcccc
Q 048419          407 DYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQ-RVVHRDVKPSNILLDTYLNAKLGDFGLAKIY  485 (653)
Q Consensus       407 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~-~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~  485 (653)
                      ||++ |+|.+++...... ...+++..++.++.|++.||.|||+   + +|+||||||+||+++.++.+||+|||+++..
T Consensus        86 e~~~-~~l~~~l~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~  160 (290)
T 3fme_A           86 ELMD-TSLDKFYKQVIDK-GQTIPEDILGKIAVSIVKALEHLHS---KLSVIHRDVKPSNVLINALGQVKMCDFGISGYL  160 (290)
T ss_dssp             ECCS-EEHHHHHHHHHHT-TCCCCHHHHHHHHHHHHHHHHHHHH---HSCCCCCCCSGGGCEECTTCCEEBCCC------
T ss_pred             ehhc-cchHHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHhh---cCCeecCCCCHHHEEECCCCCEEEeecCCcccc
Confidence            9997 5888887653211 3568999999999999999999999   7 9999999999999999999999999999876


Q ss_pred             cCCCCCcccccccCCcccCcccc----ccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchh
Q 048419          486 EHGANPQTTHIVGTLGYLAPELT----RTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEIT  561 (653)
Q Consensus       486 ~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~  561 (653)
                      ....  ......||+.|+|||.+    .+..++.++|||||||++|||++|+.||........ .+........      
T Consensus       161 ~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~~~~~~~~------  231 (290)
T 3fme_A          161 VDDV--AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQ-QLKQVVEEPS------  231 (290)
T ss_dssp             -----------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHH-HHHHHHHSCC------
T ss_pred             cccc--cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHH-HHHHHhccCC------
Confidence            4432  22334689999999996    556789999999999999999999999975332211 1111111100      


Q ss_pred             HhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          562 QAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       562 ~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                          +  ..........+.+++.+||+.||.+|||+.|++++-
T Consensus       232 ----~--~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~hp  268 (290)
T 3fme_A          232 ----P--QLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHP  268 (290)
T ss_dssp             ----C--CCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTSH
T ss_pred             ----C--CcccccCCHHHHHHHHHHhhcChhhCcCHHHHHhCc
Confidence                0  001112245688999999999999999999999843

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=100.00  E-value=1.4e-39  Score=344.67  Aligned_cols=269  Identities=23%  Similarity=0.313  Sum_probs=206.4

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc--hhhHHHHHHHHHHHhhcCCCceeeeeeeecc--------c
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS--QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRK--------Q  399 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~--------~  399 (653)
                      ++|...+.||+|+||.||+|.+..+|+.||||++....  ......+.+|+.++++++||||+++++++..        .
T Consensus        17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   96 (351)
T 3mi9_A           17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK   96 (351)
T ss_dssp             GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------
T ss_pred             cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCC
Confidence            57889999999999999999999899999999986542  2234577899999999999999999999876        3


Q ss_pred             ceeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEee
Q 048419          400 DELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDF  479 (653)
Q Consensus       400 ~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df  479 (653)
                      +..++||||+++ +|.+.+....    ..+++.+++.++.||+.||.|||+   ++|+||||||+|||++.++.+||+||
T Consensus        97 ~~~~lv~e~~~~-~l~~~l~~~~----~~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIl~~~~~~~kl~Df  168 (351)
T 3mi9_A           97 GSIYLVFDFCEH-DLAGLLSNVL----VKFTLSEIKRVMQMLLNGLYYIHR---NKILHRDMKAANVLITRDGVLKLADF  168 (351)
T ss_dssp             CEEEEEEECCSE-EHHHHHHCTT----SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCC
T ss_pred             ceEEEEEeccCC-CHHHHHhhcc----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCHHHEEEcCCCCEEEccc
Confidence            468999999975 7777776543    348999999999999999999999   89999999999999999999999999


Q ss_pred             cCcccccCCC---CCcccccccCCcccCcccccc-CCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhh
Q 048419          480 GLAKIYEHGA---NPQTTHIVGTLGYLAPELTRT-GKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELH  555 (653)
Q Consensus       480 Gla~~~~~~~---~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~  555 (653)
                      |+++......   ........||+.|+|||.+.+ ..++.++|||||||++|||++|+.||...................
T Consensus       169 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~  248 (351)
T 3mi9_A          169 GLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSI  248 (351)
T ss_dssp             TTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCC
T ss_pred             hhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCC
Confidence            9998764322   122234578999999998876 457999999999999999999999998765443322221111111


Q ss_pred             cccchhHhhh----hcc-----CcCCHH-------HHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          556 LEGEITQAID----QTL-----DYYDLA-------EAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       556 ~~~~~~~~~d----~~l-----~~~~~~-------~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                      ........-.    ..+     ......       ....+.+|+.+||+.||.+|||+.|++++-..
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f  315 (351)
T 3mi9_A          249 TPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFF  315 (351)
T ss_dssp             CTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGG
T ss_pred             ChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCCCCc
Confidence            1111111000    000     000111       13458899999999999999999999997654

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=100.00  E-value=9.6e-40  Score=334.23  Aligned_cols=249  Identities=30%  Similarity=0.385  Sum_probs=197.2

Q ss_pred             hcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeeccc-ceeEEEEe
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQ-DELLLVYD  407 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~-~~~~lV~E  407 (653)
                      .++|...+.||+|+||.||+|...  |+.||||++....  ..+.+.+|+.++++++||||+++++++.+. +..++|||
T Consensus        20 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e   95 (278)
T 1byg_A           20 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE   95 (278)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEET--TEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEEC
T ss_pred             hhhceEEeEEecCCCceEEEEEEc--CCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEe
Confidence            367888999999999999999885  7899999986443  457789999999999999999999987554 47899999


Q ss_pred             ccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccC
Q 048419          408 YVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEH  487 (653)
Q Consensus       408 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~  487 (653)
                      |+++++|.+++....   ...+++..++.++.|+++||.|||+   ++++||||||+||+++.++.+||+|||++.....
T Consensus        96 ~~~~~~L~~~l~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~  169 (278)
T 1byg_A           96 YMAKGSLVDYLRSRG---RSVLGGDCLLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS  169 (278)
T ss_dssp             CCTTEEHHHHHHHHH---HHHCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTSCEEECCCCC------
T ss_pred             cCCCCCHHHHHHhcc---cccCCHHHHHHHHHHHHHHHHHHHh---CCccccCCCcceEEEeCCCcEEEeeccccccccc
Confidence            999999999997643   3347899999999999999999999   8999999999999999999999999999986543


Q ss_pred             CCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhh
Q 048419          488 GANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQ  566 (653)
Q Consensus       488 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  566 (653)
                      .    .....+++.|+|||.+.+..++.++||||||+++|||++ |+.||........   ...+.    .+.       
T Consensus       170 ~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~---~~~~~----~~~-------  231 (278)
T 1byg_A          170 T----QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDV---VPRVE----KGY-------  231 (278)
T ss_dssp             ----------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGH---HHHHT----TTC-------
T ss_pred             c----ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHH---HHHHh----cCC-------
Confidence            2    122357889999999998899999999999999999998 9999975433211   11111    000       


Q ss_pred             ccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          567 TLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       567 ~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                       ...........+.+++.+||+.||.+||++.|+++.|+.
T Consensus       232 -~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~  270 (278)
T 1byg_A          232 -KMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEH  270 (278)
T ss_dssp             -CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             -CCCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHH
Confidence             011112234678899999999999999999999999864

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=100.00  E-value=7.8e-40  Score=343.23  Aligned_cols=260  Identities=23%  Similarity=0.336  Sum_probs=205.0

Q ss_pred             hcCcCcceeeeeeCcEEEEEEEe-----CCCCcEEEEEEeccC-chhhHHHHHHHHHHHhhcCCCceeeeeeeeccccee
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGLM-----PSLGLEVAIKRIGHN-SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDEL  402 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~~-----~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~  402 (653)
                      .++|...+.||+|+||.||+|.+     ..++..||||++... .......+.+|+.++++++||||+++++++.+.+..
T Consensus        29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  108 (327)
T 2yfx_A           29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR  108 (327)
T ss_dssp             GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCc
Confidence            46788899999999999999994     456789999999654 445567899999999999999999999999999999


Q ss_pred             EEEEeccCCCCchhhhhccccc--ccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcC---CCcEEEE
Q 048419          403 LLVYDYVPNGSLDKLLFDKDHK--LRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDT---YLNAKLG  477 (653)
Q Consensus       403 ~lV~E~~~~gsL~~~l~~~~~~--~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~  477 (653)
                      ++||||+++++|.+++......  ....+++.+++.++.||+.||.|||+   ++|+||||||+|||++.   +..+||+
T Consensus       109 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~---~~i~H~dlkp~NIli~~~~~~~~~kl~  185 (327)
T 2yfx_A          109 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVAKIG  185 (327)
T ss_dssp             EEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred             EEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhh---CCeecCcCCHhHEEEecCCCcceEEEC
Confidence            9999999999999999875321  12458899999999999999999999   89999999999999984   4569999


Q ss_pred             eecCcccccCCCC-CcccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhh
Q 048419          478 DFGLAKIYEHGAN-PQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELH  555 (653)
Q Consensus       478 DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~  555 (653)
                      |||+++....... .......+++.|+|||.+.+..++.++|||||||++|||++ |+.||.......   +.+.+....
T Consensus       186 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~---~~~~~~~~~  262 (327)
T 2yfx_A          186 DFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE---VLEFVTSGG  262 (327)
T ss_dssp             CCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH---HHHHHHTTC
T ss_pred             ccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHH---HHHHHhcCC
Confidence            9999986543221 22233467899999999988899999999999999999998 999987654321   111111110


Q ss_pred             cccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          556 LEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       556 ~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                                  ...........+.+++.+||+.||.+||++.+++++|+.
T Consensus       263 ------------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~  301 (327)
T 2yfx_A          263 ------------RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEY  301 (327)
T ss_dssp             ------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             ------------CCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHH
Confidence                        001111234578899999999999999999999999975

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=100.00  E-value=2.4e-39  Score=358.41  Aligned_cols=255  Identities=21%  Similarity=0.338  Sum_probs=206.7

Q ss_pred             hhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC--chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEE
Q 048419          328 VTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLV  405 (653)
Q Consensus       328 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV  405 (653)
                      ..++|...+.||+|+||.||+|.+..+++.||||++...  .....+.+.+|++++++++||||+++++++.+.+.+++|
T Consensus        20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv   99 (486)
T 3mwu_A           20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV   99 (486)
T ss_dssp             HHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEE
Confidence            456799999999999999999999989999999998543  233467889999999999999999999999999999999


Q ss_pred             EeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEc---CCCcEEEEeecCc
Q 048419          406 YDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLD---TYLNAKLGDFGLA  482 (653)
Q Consensus       406 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~---~~~~~kl~DfGla  482 (653)
                      |||+++|+|.+++...     ..+++.+++.++.||+.||.|||+   ++|+||||||+|||++   .++.+||+|||++
T Consensus       100 ~e~~~~~~L~~~~~~~-----~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a  171 (486)
T 3mwu_A          100 GELYTGGELFDEIIKR-----KRFSEHDAARIIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLS  171 (486)
T ss_dssp             ECCCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEESSSSTTCCEEECSCSCT
T ss_pred             EEcCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCchHHEEEecCCCCCCEEEEECCcC
Confidence            9999999999988654     348999999999999999999999   8999999999999995   4567999999999


Q ss_pred             ccccCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhH
Q 048419          483 KIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQ  562 (653)
Q Consensus       483 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~  562 (653)
                      +......  ......||+.|+|||++.+ .++.++||||+||++|||++|+.||.......   +...+.......... 
T Consensus       172 ~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~---~~~~i~~~~~~~~~~-  244 (486)
T 3mwu_A          172 TCFQQNT--KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYD---ILKRVETGKYAFDLP-  244 (486)
T ss_dssp             TTBCCC------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHHHHHHTCCCSCSG-
T ss_pred             eECCCCC--ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHhCCCCCCCc-
Confidence            8764432  2344579999999999875 58999999999999999999999997654322   111111110000000 


Q ss_pred             hhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          563 AIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       563 ~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                          ..    ......+.+++.+||+.||.+|||+.|++++-.
T Consensus       245 ----~~----~~~s~~~~~li~~~L~~dp~~R~t~~~~l~hp~  279 (486)
T 3mwu_A          245 ----QW----RTISDDAKDLIRKMLTFHPSLRITATQCLEHPW  279 (486)
T ss_dssp             ----GG----GGSCHHHHHHHHHHTCSSTTTSCCHHHHHHCHH
T ss_pred             ----cc----CCCCHHHHHHHHHHcCCChhhCcCHHHHhcCHh
Confidence                00    112356889999999999999999999998653

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=100.00  E-value=3.3e-39  Score=341.82  Aligned_cols=269  Identities=23%  Similarity=0.304  Sum_probs=205.9

Q ss_pred             hhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC-chhhHHHHHHHHHHHhhcCCCceeeeeeeeccc-----ce
Q 048419          328 VTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN-SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQ-----DE  401 (653)
Q Consensus       328 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~-----~~  401 (653)
                      ..++|...+.||+|+||.||+|.+..+|+.||||++... .......+.+|+.++++++||||+++++++...     ..
T Consensus         9 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   88 (353)
T 2b9h_A            9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNE   88 (353)
T ss_dssp             SCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCC
T ss_pred             cccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccce
Confidence            457899999999999999999999988999999999654 334456788999999999999999999988654     67


Q ss_pred             eEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecC
Q 048419          402 LLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGL  481 (653)
Q Consensus       402 ~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl  481 (653)
                      .++||||+. ++|.+++...      .+++..++.++.|++.||.|||+   ++|+||||||+|||++.++.+||+|||+
T Consensus        89 ~~lv~e~~~-~~L~~~~~~~------~~~~~~~~~~~~qi~~~L~~LH~---~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~  158 (353)
T 2b9h_A           89 VYIIQELMQ-TDLHRVISTQ------MLSDDHIQYFIYQTLRAVKVLHG---SNVIHRDLKPSNLLINSNCDLKVCDFGL  158 (353)
T ss_dssp             EEEEECCCS-EEHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTCCEEECCCTT
T ss_pred             EEEEEeccC-ccHHHHHhhc------CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEEcCCCcEEEEeccc
Confidence            899999997 5899888643      48999999999999999999999   8999999999999999999999999999


Q ss_pred             cccccCCCCC---------cccccccCCcccCcccccc-CCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHH
Q 048419          482 AKIYEHGANP---------QTTHIVGTLGYLAPELTRT-GKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWV  551 (653)
Q Consensus       482 a~~~~~~~~~---------~~~~~~gt~~y~aPE~~~~-~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~  551 (653)
                      ++........         ......||+.|+|||.+.+ ..++.++|||||||++|||++|+.||.............-.
T Consensus       159 a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~  238 (353)
T 2b9h_A          159 ARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGI  238 (353)
T ss_dssp             CEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHH
T ss_pred             ccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHH
Confidence            9876432211         1223468999999998754 67899999999999999999999999876543322111100


Q ss_pred             Hhhhc---------ccchhHhhhhcc--CcCC-----HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          552 KELHL---------EGEITQAIDQTL--DYYD-----LAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       552 ~~~~~---------~~~~~~~~d~~l--~~~~-----~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                      .....         .....+.+....  ....     ......+.+++.+||+.||.+|||+.|++++-.-
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~  309 (353)
T 2b9h_A          239 IGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYL  309 (353)
T ss_dssp             HCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGG
T ss_pred             hCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCccc
Confidence            00000         000011110000  0000     1224678899999999999999999999986643

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=100.00  E-value=6.7e-40  Score=344.38  Aligned_cols=264  Identities=27%  Similarity=0.356  Sum_probs=203.3

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc--hhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEe
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS--QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYD  407 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E  407 (653)
                      ++|+..+.||+|+||.||+|.+..+++.||||++....  ....+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  104 (331)
T 4aaa_A           25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFE  104 (331)
T ss_dssp             GGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             hhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEe
Confidence            56888999999999999999999999999999986543  3345678899999999999999999999999999999999


Q ss_pred             ccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccC
Q 048419          408 YVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEH  487 (653)
Q Consensus       408 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~  487 (653)
                      |+++++|.+++...     ..+++..++.++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+++....
T Consensus       105 ~~~~~~l~~~~~~~-----~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~  176 (331)
T 4aaa_A          105 FVDHTILDDLELFP-----NGLDYQVVQKYLFQIINGIGFCHS---HNIIHRDIKPENILVSQSGVVKLCDFGFARTLAA  176 (331)
T ss_dssp             CCSEEHHHHHHHST-----TCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCTTC-----
T ss_pred             cCCcchHHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHHH---CCEEccCcChheEEEcCCCcEEEEeCCCceeecC
Confidence            99999998876543     348999999999999999999999   8999999999999999999999999999986543


Q ss_pred             CCCCcccccccCCcccCccccccC-CCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhh----------c
Q 048419          488 GANPQTTHIVGTLGYLAPELTRTG-KATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELH----------L  556 (653)
Q Consensus       488 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~----------~  556 (653)
                      .. .......||+.|+|||.+.+. .++.++|||||||++|||++|+.||..........  ..+....          .
T Consensus       177 ~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~--~~~~~~~~~~~~~~~~~~  253 (331)
T 4aaa_A          177 PG-EVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLY--HIMMCLGNLIPRHQELFN  253 (331)
T ss_dssp             --------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH--HHHHHHCSCCHHHHHHHH
T ss_pred             Cc-cccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHH--HHHHHhCCCChhhhhHhh
Confidence            22 222345789999999998765 78999999999999999999999998665433221  1111000          0


Q ss_pred             -ccchhHhhhhcc-CcCCH-----HHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          557 -EGEITQAIDQTL-DYYDL-----AEAELVLNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       557 -~~~~~~~~d~~l-~~~~~-----~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                       .........+.+ .....     .....+.+|+.+||+.||.+|||+.|++++-
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp  308 (331)
T 4aaa_A          254 KNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHD  308 (331)
T ss_dssp             HCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSH
T ss_pred             hccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcCc
Confidence             000000000111 01111     2246789999999999999999999999753

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=100.00  E-value=1.2e-39  Score=370.87  Aligned_cols=247  Identities=27%  Similarity=0.383  Sum_probs=198.4

Q ss_pred             eeeeeeCcEEEEEEEe--CCCCcEEEEEEeccC--chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEeccCC
Q 048419          336 NLVGSGGFGRVYRGLM--PSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPN  411 (653)
Q Consensus       336 ~~LG~G~fg~Vy~~~~--~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~  411 (653)
                      +.||+|+||.||+|.+  ...++.||||+++..  .....+++.+|++++++++|||||+++++|.. +..++|||||++
T Consensus       375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~  453 (635)
T 4fl3_A          375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL  453 (635)
T ss_dssp             EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred             CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence            5799999999999954  455688999999754  33446889999999999999999999999964 458899999999


Q ss_pred             CCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCCC-
Q 048419          412 GSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGAN-  490 (653)
Q Consensus       412 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~-  490 (653)
                      |+|.+++...     ..+++.+++.++.||+.||+|||+   ++|+||||||+||||+.++.+||+|||+++....... 
T Consensus       454 g~L~~~l~~~-----~~l~~~~~~~i~~qi~~~L~yLH~---~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~  525 (635)
T 4fl3_A          454 GPLNKYLQQN-----RHVKDKNIIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY  525 (635)
T ss_dssp             EEHHHHHHHC-----TTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC----
T ss_pred             CCHHHHHhhC-----CCCCHHHHHHHHHHHHHHHHHHHH---CCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccc
Confidence            9999999653     348999999999999999999999   8999999999999999999999999999987654322 


Q ss_pred             -CcccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhcc
Q 048419          491 -PQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTL  568 (653)
Q Consensus       491 -~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l  568 (653)
                       .......+|+.|+|||++.+..++.++|||||||++|||++ |+.||.......   +.+.+..    +..        
T Consensus       526 ~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~---~~~~i~~----~~~--------  590 (635)
T 4fl3_A          526 YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE---VTAMLEK----GER--------  590 (635)
T ss_dssp             ---------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH---HHHHHHT----TCC--------
T ss_pred             cccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH---HHHHHHc----CCC--------
Confidence             12233456789999999999999999999999999999998 999998655432   1111111    100        


Q ss_pred             CcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          569 DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       569 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                      ...+......+.+|+.+||+.||.+||++.+|++.|+.
T Consensus       591 ~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~  628 (635)
T 4fl3_A          591 MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRN  628 (635)
T ss_dssp             CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred             CCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence            11122334678999999999999999999999999863

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=100.00  E-value=3.4e-39  Score=358.68  Aligned_cols=255  Identities=24%  Similarity=0.331  Sum_probs=206.0

Q ss_pred             hhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCch-------------hhHHHHHHHHHHHhhcCCCceeeeee
Q 048419          328 VTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQ-------------QGMKEFVAEIMSMGRLRHRNLVQLHG  394 (653)
Q Consensus       328 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-------------~~~~~~~~E~~~l~~l~H~niv~l~g  394 (653)
                      ..++|...+.||+|+||.||+|.+..++..||||++.....             ...+.+.+|+.++++++||||+++++
T Consensus        34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~  113 (504)
T 3q5i_A           34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD  113 (504)
T ss_dssp             GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred             cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence            56789999999999999999999999999999999865421             33567899999999999999999999


Q ss_pred             eecccceeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCC--
Q 048419          395 WCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYL--  472 (653)
Q Consensus       395 ~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~--  472 (653)
                      ++.+.+..++|||||++|+|.+++...     ..+++..++.++.||+.||.|||+   ++|+||||||+|||++.++  
T Consensus       114 ~~~~~~~~~lv~e~~~gg~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~  185 (504)
T 3q5i_A          114 VFEDKKYFYLVTEFYEGGELFEQIINR-----HKFDECDAANIMKQILSGICYLHK---HNIVHRDIKPENILLENKNSL  185 (504)
T ss_dssp             EEECSSEEEEEEECCTTCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESSTTCC
T ss_pred             EEEcCCEEEEEEecCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCcHHHEEEecCCCC
Confidence            999999999999999999999988654     348999999999999999999999   8999999999999998775  


Q ss_pred             -cEEEEeecCcccccCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHH
Q 048419          473 -NAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWV  551 (653)
Q Consensus       473 -~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~  551 (653)
                       .+||+|||+++......  ......||+.|+|||++. ..++.++||||+||++|+|++|+.||.......   +...+
T Consensus       186 ~~~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~---~~~~i  259 (504)
T 3q5i_A          186 LNIKIVDFGLSSFFSKDY--KLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQD---IIKKV  259 (504)
T ss_dssp             SSEEECCCTTCEECCTTS--CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHHHH
T ss_pred             ccEEEEECCCCEEcCCCC--ccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHH
Confidence             69999999998765432  234457999999999987 468999999999999999999999998654432   11111


Q ss_pred             HhhhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          552 KELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       552 ~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                      ...........     ..    .....+.+|+.+||+.||.+|||+.|++++-.
T Consensus       260 ~~~~~~~~~~~-----~~----~~s~~~~~li~~~L~~dp~~R~t~~e~l~h~~  304 (504)
T 3q5i_A          260 EKGKYYFDFND-----WK----NISDEAKELIKLMLTYDYNKRCTAEEALNSRW  304 (504)
T ss_dssp             HHCCCCCCHHH-----HT----TSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHH
T ss_pred             HcCCCCCCccc-----cC----CCCHHHHHHHHHHcCCChhHCCCHHHHhcCHh
Confidence            11100000000     00    12356889999999999999999999998653

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=100.00  E-value=4.9e-39  Score=332.16  Aligned_cols=257  Identities=24%  Similarity=0.334  Sum_probs=208.0

Q ss_pred             HhhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc---------hhhHHHHHHHHHHHhhcC-CCceeeeeeee
Q 048419          327 SVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS---------QQGMKEFVAEIMSMGRLR-HRNLVQLHGWC  396 (653)
Q Consensus       327 ~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~---------~~~~~~~~~E~~~l~~l~-H~niv~l~g~~  396 (653)
                      ...++|...+.||+|+||.||+|.+..+++.||||++....         ....+.+.+|+.+++++. ||||+++++++
T Consensus        14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~   93 (298)
T 1phk_A           14 GFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTY   93 (298)
T ss_dssp             -CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred             chhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeee
Confidence            34578999999999999999999999899999999996542         123467889999999996 99999999999


Q ss_pred             cccceeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEE
Q 048419          397 RKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKL  476 (653)
Q Consensus       397 ~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl  476 (653)
                      ...+..++||||+++++|.+++...     ..+++.+++.++.||+.||.|||+   ++++|+||||+||+++.++.+||
T Consensus        94 ~~~~~~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl  165 (298)
T 1phk_A           94 ETNTFFFLVFDLMKKGELFDYLTEK-----VTLSEKETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKL  165 (298)
T ss_dssp             ECSSEEEEEEECCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEE
T ss_pred             ccCCeEEEEEeccCCCcHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcceEEEcCCCcEEE
Confidence            9999999999999999999999753     348999999999999999999999   89999999999999999999999


Q ss_pred             EeecCcccccCCCCCcccccccCCcccCccccc------cCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHH
Q 048419          477 GDFGLAKIYEHGANPQTTHIVGTLGYLAPELTR------TGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDW  550 (653)
Q Consensus       477 ~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~  550 (653)
                      +|||++.......  ......|++.|+|||.+.      ...++.++||||||+++|||++|+.||.......   ....
T Consensus       166 ~dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~---~~~~  240 (298)
T 1phk_A          166 TDFGFSCQLDPGE--KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQML---MLRM  240 (298)
T ss_dssp             CCCTTCEECCTTC--CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHHH
T ss_pred             ecccchhhcCCCc--ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHH---HHHH
Confidence            9999998765432  233457899999999885      4568899999999999999999999997654321   1111


Q ss_pred             HHhhhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          551 VKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       551 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                      +......  ..   .+.    .......+.+++.+||+.||.+|||+.|++++-.
T Consensus       241 ~~~~~~~--~~---~~~----~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~  286 (298)
T 1phk_A          241 IMSGNYQ--FG---SPE----WDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPF  286 (298)
T ss_dssp             HHHTCCC--CC---TTT----GGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGG
T ss_pred             HhcCCcc--cC---ccc----ccccCHHHHHHHHHHccCCcccCCCHHHHHhChH
Confidence            1110000  00   000    0122456889999999999999999999997543

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=100.00  E-value=4.9e-39  Score=345.72  Aligned_cols=263  Identities=22%  Similarity=0.243  Sum_probs=205.6

Q ss_pred             hcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcC--------CCceeeeeeeec---
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLR--------HRNLVQLHGWCR---  397 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--------H~niv~l~g~~~---  397 (653)
                      .++|...+.||+|+||.||+|.+..+++.||||++... ....+.+.+|+.++++++        |+||+++++++.   
T Consensus        36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~  114 (397)
T 1wak_A           36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG  114 (397)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred             CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence            47899999999999999999999989999999999643 345677889999999996        788999999987   


Q ss_pred             -ccceeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCC-CeEecCCCCCcEEEcCCC---
Q 048419          398 -KQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQ-RVVHRDVKPSNILLDTYL---  472 (653)
Q Consensus       398 -~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~-~ivH~Dlkp~NIll~~~~---  472 (653)
                       .....++||||+ +++|.+++....   ...+++.+++.++.||+.||.|||+   + +|+||||||+|||++.++   
T Consensus       115 ~~~~~~~lv~e~~-~~~l~~~~~~~~---~~~~~~~~~~~i~~qi~~aL~~lH~---~~givHrDikp~NIll~~~~~~~  187 (397)
T 1wak_A          115 VNGTHICMVFEVL-GHHLLKWIIKSN---YQGLPLPCVKKIIQQVLQGLDYLHT---KCRIIHTDIKPENILLSVNEQYI  187 (397)
T ss_dssp             TTEEEEEEEECCC-CCBHHHHHHHTT---TSCCCHHHHHHHHHHHHHHHHHHHH---TTCEECCCCSGGGEEECCCHHHH
T ss_pred             CCCceEEEEEecc-CccHHHHHHhcc---cCCCCHHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHeeEeccchhh
Confidence             566899999999 567766665442   2458999999999999999999999   7 999999999999998775   


Q ss_pred             ----------------------------------------------cEEEEeecCcccccCCCCCcccccccCCcccCcc
Q 048419          473 ----------------------------------------------NAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPE  506 (653)
Q Consensus       473 ----------------------------------------------~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE  506 (653)
                                                                    .+||+|||+++.....    .....||+.|+|||
T Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~----~~~~~gt~~y~aPE  263 (397)
T 1wak_A          188 RRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH----FTEDIQTRQYRSLE  263 (397)
T ss_dssp             HHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC----SCSCCSCGGGCCHH
T ss_pred             hhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc----CccCCCCCcccCCh
Confidence                                                          7999999999876432    23347899999999


Q ss_pred             ccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhh---HHHHHHHHHhhhcc--------cchh--------------
Q 048419          507 LTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAA---ELLLVDWVKELHLE--------GEIT--------------  561 (653)
Q Consensus       507 ~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~---~~~l~~~~~~~~~~--------~~~~--------------  561 (653)
                      ++.+..++.++|||||||++|||++|+.||.......   .......+......        +...              
T Consensus       264 ~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  343 (397)
T 1wak_A          264 VLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHIT  343 (397)
T ss_dssp             HHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCC
T ss_pred             hhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCcccccccc
Confidence            9999999999999999999999999999997543211   00011111110000        0000              


Q ss_pred             --------HhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          562 --------QAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       562 --------~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                              +.+... ..........+.+|+.+||+.||.+|||+.|++++-
T Consensus       344 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp  393 (397)
T 1wak_A          344 KLKPWGLFEVLVEK-YEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHP  393 (397)
T ss_dssp             CCCCCCHHHHHHHT-SCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTSG
T ss_pred             ccCCcchhHhhhhh-cccchhhHHHHHHHHHHHhccChhhcCCHHHHhhCc
Confidence                    000000 123456678899999999999999999999999764

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=100.00  E-value=1.4e-39  Score=360.07  Aligned_cols=255  Identities=22%  Similarity=0.347  Sum_probs=209.9

Q ss_pred             hhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC---chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEE
Q 048419          328 VTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN---SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLL  404 (653)
Q Consensus       328 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  404 (653)
                      ..++|...+.||+|+||.||+|.+..+++.||||++...   .....+.+.+|+.++++++||||+++++++.+.+..++
T Consensus        24 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l  103 (484)
T 3nyv_A           24 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYL  103 (484)
T ss_dssp             HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred             ccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence            456788999999999999999999989999999998643   23456789999999999999999999999999999999


Q ss_pred             EEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEE---cCCCcEEEEeecC
Q 048419          405 VYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILL---DTYLNAKLGDFGL  481 (653)
Q Consensus       405 V~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~DfGl  481 (653)
                      ||||+++|+|.+++...     ..+++.+++.++.||+.||.|||+   ++|+||||||+|||+   +.++.+||+|||+
T Consensus       104 v~e~~~~~~L~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~  175 (484)
T 3nyv_A          104 VGEVYTGGELFDEIISR-----KRFSEVDAARIIRQVLSGITYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGL  175 (484)
T ss_dssp             EECCCCSCBHHHHHHTC-----SCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESSSSTTCCEEECCTTH
T ss_pred             EEecCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEEecCCCCCcEEEEeeee
Confidence            99999999999988764     348999999999999999999999   899999999999999   5678999999999


Q ss_pred             cccccCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchh
Q 048419          482 AKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEIT  561 (653)
Q Consensus       482 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~  561 (653)
                      ++......  ......||+.|+|||++.+ .++.++||||+||++|||++|+.||.......   +...+..........
T Consensus       176 a~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~---~~~~i~~~~~~~~~~  249 (484)
T 3nyv_A          176 STHFEASK--KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYD---ILKKVEKGKYTFELP  249 (484)
T ss_dssp             HHHBCCCC--SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHHHHHHCCCCCCSG
T ss_pred             eEEccccc--ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHH---HHHHHHcCCCCCCCc
Confidence            98765432  3344579999999999875 68999999999999999999999998654432   111111111000000


Q ss_pred             HhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          562 QAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       562 ~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                           ..    ......+.+++.+||+.||.+|||+.|++++-.
T Consensus       250 -----~~----~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h~~  284 (484)
T 3nyv_A          250 -----QW----KKVSESAKDLIRKMLTYVPSMRISARDALDHEW  284 (484)
T ss_dssp             -----GG----GGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHH
T ss_pred             -----cc----ccCCHHHHHHHHHHCCCChhHCcCHHHHhhChh
Confidence                 00    112456889999999999999999999998653

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=100.00  E-value=7.6e-40  Score=342.83  Aligned_cols=265  Identities=25%  Similarity=0.359  Sum_probs=205.3

Q ss_pred             cccCHHHHHHhhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhc-CCCceeeeeeee
Q 048419          318 RRFKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRL-RHRNLVQLHGWC  396 (653)
Q Consensus       318 ~~f~~~el~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~  396 (653)
                      ..+.+.++....++|...+.||+|+||.||+|.+..+++.||||++.... ...+.+.+|+.+++++ +||||+++++++
T Consensus        12 ~~~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~   90 (326)
T 2x7f_A           12 DEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAF   90 (326)
T ss_dssp             ----CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEE
T ss_pred             hhccchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEE
Confidence            44566666778889999999999999999999998889999999986543 3346788999999999 799999999998


Q ss_pred             cc------cceeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcC
Q 048419          397 RK------QDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDT  470 (653)
Q Consensus       397 ~~------~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~  470 (653)
                      ..      .+..++||||+++++|.+++....   ...+++..++.++.||+.||.|||+   ++|+|+||||+|||++.
T Consensus        91 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~  164 (326)
T 2x7f_A           91 IKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTK---GNTLKEEWIAYICREILRGLSHLHQ---HKVIHRDIKGQNVLLTE  164 (326)
T ss_dssp             EECC--CCCCEEEEEEECCTTEEHHHHHHHSG---GGCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECT
T ss_pred             eeccCccccceEEEEEEcCCCCcHHHHHHhcc---cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCcHHHEEEcC
Confidence            76      467899999999999999997653   3458899999999999999999999   89999999999999999


Q ss_pred             CCcEEEEeecCcccccCCCCCcccccccCCcccCccccc-----cCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHH
Q 048419          471 YLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTR-----TGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAEL  545 (653)
Q Consensus       471 ~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~  545 (653)
                      ++.+||+|||++....... .......|++.|+|||.+.     ...++.++|||||||++|||++|+.||.........
T Consensus       165 ~~~~kl~Dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~  243 (326)
T 2x7f_A          165 NAEVKLVDFGVSAQLDRTV-GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRAL  243 (326)
T ss_dssp             TCCEEECCCTTTC--------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHH
T ss_pred             CCCEEEeeCcCceecCcCc-cccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHH
Confidence            9999999999998654322 1223356899999999986     567889999999999999999999999765432211


Q ss_pred             HHHHHHHhhhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          546 LLVDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       546 ~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                      .   .+..    ..     .+.+  ........+.+++.+||+.||.+||++.+++++-
T Consensus       244 ~---~~~~----~~-----~~~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~hp  288 (326)
T 2x7f_A          244 F---LIPR----NP-----APRL--KSKKWSKKFQSFIESCLVKNHSQRPATEQLMKHP  288 (326)
T ss_dssp             H---HHHH----SC-----CCCC--SCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTSH
T ss_pred             H---Hhhc----Cc-----cccC--CccccCHHHHHHHHHHhccChhhCCCHHHHhhCh
Confidence            1   0000    00     0111  0111235688999999999999999999999854

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=100.00  E-value=2.6e-39  Score=344.60  Aligned_cols=274  Identities=25%  Similarity=0.300  Sum_probs=209.0

Q ss_pred             HHHHHhhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC-chhhHHHHHHHHHHHhhcCCCceeeeeeeeccc--
Q 048419          323 AELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN-SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQ--  399 (653)
Q Consensus       323 ~el~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~--  399 (653)
                      .+.....++|...+.||+|+||.||+|.+..++..||||++... .....+.+.+|++++++++||||+++++++...  
T Consensus        20 g~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~   99 (364)
T 3qyz_A           20 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTI   99 (364)
T ss_dssp             -CBCCCTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSST
T ss_pred             cEeccccccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCc
Confidence            33344567899999999999999999999989999999999754 334457889999999999999999999998655  


Q ss_pred             ---ceeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEE
Q 048419          400 ---DELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKL  476 (653)
Q Consensus       400 ---~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl  476 (653)
                         ...++||||+. |+|.+++...      .+++.+++.++.||+.||.|||+   ++|+||||||+|||++.++.+||
T Consensus       100 ~~~~~~~iv~e~~~-~~L~~~l~~~------~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl  169 (364)
T 3qyz_A          100 EQMKDVYIVQDLME-TDLYKLLKTQ------HLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKI  169 (364)
T ss_dssp             TTCCCEEEEEECCS-EEHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEE
T ss_pred             cccceEEEEEcccC-cCHHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCChHhEEECCCCCEEE
Confidence               36899999997 5899988543      38999999999999999999999   89999999999999999999999


Q ss_pred             EeecCcccccCCCCC--cccccccCCcccCcccccc-CCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHh
Q 048419          477 GDFGLAKIYEHGANP--QTTHIVGTLGYLAPELTRT-GKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKE  553 (653)
Q Consensus       477 ~DfGla~~~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~  553 (653)
                      +|||+++........  ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||......+..........
T Consensus       170 ~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~  249 (364)
T 3qyz_A          170 CDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG  249 (364)
T ss_dssp             CCCTTCEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHC
T ss_pred             EeCcceEecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhC
Confidence            999999876432211  1234579999999998654 4589999999999999999999999976554332211100000


Q ss_pred             hhccc--------chhHhhhhcc--CcCC-----HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          554 LHLEG--------EITQAIDQTL--DYYD-----LAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       554 ~~~~~--------~~~~~~d~~l--~~~~-----~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                      .....        ..........  ....     ......+.+|+.+||+.||.+|||+.|++++-.-
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~  317 (364)
T 3qyz_A          250 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL  317 (364)
T ss_dssp             SCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGG
T ss_pred             CCCHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcch
Confidence            00000        0000000000  0011     1123568899999999999999999999987654

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=100.00  E-value=3e-39  Score=352.07  Aligned_cols=200  Identities=30%  Similarity=0.414  Sum_probs=169.8

Q ss_pred             hhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC--chhhHHHHHHHHHHHhhcCCCceeeeeeeeccc-----c
Q 048419          328 VTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQ-----D  400 (653)
Q Consensus       328 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~-----~  400 (653)
                      ..++|...+.||+|+||.||+|.+..+++.||||++...  .....+.+.+|+.++++++|+||+++++++...     +
T Consensus        24 i~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~  103 (432)
T 3n9x_A           24 VPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFD  103 (432)
T ss_dssp             CCTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCC
T ss_pred             ecCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCC
Confidence            357899999999999999999999999999999999653  344567889999999999999999999998766     5


Q ss_pred             eeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeec
Q 048419          401 ELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFG  480 (653)
Q Consensus       401 ~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG  480 (653)
                      ..++||||+. ++|.+++...     ..+++..++.++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||
T Consensus       104 ~~~lv~e~~~-~~L~~~~~~~-----~~l~~~~~~~i~~qil~aL~~LH~---~givHrDlkp~NILl~~~~~~kL~DFG  174 (432)
T 3n9x_A          104 ELYIVLEIAD-SDLKKLFKTP-----IFLTEEHIKTILYNLLLGENFIHE---SGIIHRDLKPANCLLNQDCSVKVCDFG  174 (432)
T ss_dssp             CEEEEEECCS-EEHHHHHHSS-----CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCT
T ss_pred             eEEEEEecCC-cCHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCCCCCCCCHHHeEECCCCCEEEccCC
Confidence            7899999996 5999998653     348999999999999999999999   899999999999999999999999999


Q ss_pred             CcccccCCCC---------------------CcccccccCCcccCcccc-ccCCCCCccceeehHHHHHHHHhCCCCC
Q 048419          481 LAKIYEHGAN---------------------PQTTHIVGTLGYLAPELT-RTGKATTSTDVYSYGILMLEVACGRRSI  536 (653)
Q Consensus       481 la~~~~~~~~---------------------~~~~~~~gt~~y~aPE~~-~~~~~~~ksDV~s~Gvvl~elltG~~p~  536 (653)
                      +++.......                     .......||+.|+|||++ ....++.++|||||||++|||++|..|+
T Consensus       175 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~  252 (432)
T 3n9x_A          175 LARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSH  252 (432)
T ss_dssp             TCEEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTT
T ss_pred             CcccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhccccc
Confidence            9987643321                     123556899999999986 5667999999999999999999864443

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=100.00  E-value=6.5e-40  Score=339.41  Aligned_cols=257  Identities=23%  Similarity=0.370  Sum_probs=203.7

Q ss_pred             hhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEe
Q 048419          328 VTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYD  407 (653)
Q Consensus       328 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E  407 (653)
                      ..++|+..+.||+|+||.||+|.+..+++.||+|++........+.+.+|+.++++++||||+++++++...+..++|||
T Consensus        17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   96 (302)
T 2j7t_A           17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIE   96 (302)
T ss_dssp             GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEE
T ss_pred             CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEE
Confidence            44678999999999999999999998899999999977766677889999999999999999999999999999999999


Q ss_pred             ccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccC
Q 048419          408 YVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEH  487 (653)
Q Consensus       408 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~  487 (653)
                      |+++++|.+++....    ..+++.+++.++.||+.||.|||+   ++++||||||+||+++.++.+||+|||++.....
T Consensus        97 ~~~~~~l~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~  169 (302)
T 2j7t_A           97 FCPGGAVDAIMLELD----RGLTEPQIQVVCRQMLEALNFLHS---KRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLK  169 (302)
T ss_dssp             CCTTEEHHHHHHHHT----SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHH
T ss_pred             eCCCCcHHHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHhc---CCcccCCCCHHHEEECCCCCEEEEECCCCccccc
Confidence            999999999986542    348999999999999999999999   8999999999999999999999999998764321


Q ss_pred             CCCCcccccccCCcccCcccc-----ccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhH
Q 048419          488 GANPQTTHIVGTLGYLAPELT-----RTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQ  562 (653)
Q Consensus       488 ~~~~~~~~~~gt~~y~aPE~~-----~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~  562 (653)
                      .. .......||+.|+|||.+     ....++.++||||||+++|||++|+.|+........  +......     ... 
T Consensus       170 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~--~~~~~~~-----~~~-  240 (302)
T 2j7t_A          170 TL-QKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRV--LLKIAKS-----DPP-  240 (302)
T ss_dssp             HH-HC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH--HHHHHHS-----CCC-
T ss_pred             cc-cccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHH--HHHHhcc-----CCc-
Confidence            10 111234689999999988     356788999999999999999999999986543221  1111111     000 


Q ss_pred             hhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          563 AIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       563 ~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                          .+ ..+......+.+++.+||+.||.+|||+.+++++-.
T Consensus       241 ----~~-~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~  278 (302)
T 2j7t_A          241 ----TL-LTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPF  278 (302)
T ss_dssp             ----CC-SSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTSTT
T ss_pred             ----cc-CCccccCHHHHHHHHHHcccChhhCCCHHHHhcChH
Confidence                00 001112356889999999999999999999987543

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=100.00  E-value=1.1e-38  Score=335.14  Aligned_cols=264  Identities=21%  Similarity=0.294  Sum_probs=207.8

Q ss_pred             hcCcCcceeeeeeCcEEEEEEEe-CCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCc------eeeeeeeecccce
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGLM-PSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRN------LVQLHGWCRKQDE  401 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n------iv~l~g~~~~~~~  401 (653)
                      .++|...+.||+|+||.||+|.+ ..+++.||||++... ....+.+.+|+.++++++|++      ++++++++...+.
T Consensus        13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~   91 (339)
T 1z57_A           13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGH   91 (339)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTE
T ss_pred             cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCc
Confidence            46899999999999999999998 557899999999643 344577889999999997664      9999999999999


Q ss_pred             eEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcC-----------
Q 048419          402 LLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDT-----------  470 (653)
Q Consensus       402 ~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~-----------  470 (653)
                      .++||||+ +++|.+++....   ...+++.+++.++.||++||+|||+   ++|+||||||+|||++.           
T Consensus        92 ~~lv~e~~-~~~l~~~l~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~~~~~  164 (339)
T 1z57_A           92 ICIVFELL-GLSTYDFIKENG---FLPFRLDHIRKMAYQICKSVNFLHS---NKLTHTDLKPENILFVQSDYTEAYNPKI  164 (339)
T ss_dssp             EEEEEECC-CCBHHHHHHHTT---TCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESCCCEEEEEC---
T ss_pred             EEEEEcCC-CCCHHHHHHhcC---CCCCcHHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHHHEEEeccccccccCCcc
Confidence            99999999 889999997654   2458899999999999999999999   89999999999999987           


Q ss_pred             --------CCcEEEEeecCcccccCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhh
Q 048419          471 --------YLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAA  542 (653)
Q Consensus       471 --------~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~  542 (653)
                              ++.+||+|||+++.....    .....||+.|+|||.+.+..++.++|||||||++|||++|+.||......
T Consensus       165 ~~~~~~~~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~  240 (339)
T 1z57_A          165 KRDERTLINPDIKVVDFGSATYDDEH----HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSK  240 (339)
T ss_dssp             -CEEEEESCCCEEECCCSSCEETTSC----CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHH
T ss_pred             ccccccccCCCceEeeCcccccCccc----cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChH
Confidence                    678999999999864432    23457899999999999989999999999999999999999999865543


Q ss_pred             hHHHHHHHHHhhhcccc--------------------------hhHhhhhcc--CcCCHHHHHHHHHHHHHcCCCCCCCC
Q 048419          543 AELLLVDWVKELHLEGE--------------------------ITQAIDQTL--DYYDLAEAELVLNLGLFCSAPNPVYR  594 (653)
Q Consensus       543 ~~~~l~~~~~~~~~~~~--------------------------~~~~~d~~l--~~~~~~~~~~l~~l~~~Cl~~dP~~R  594 (653)
                      .................                          ......+..  ........+.+.+|+.+||+.||.+|
T Consensus       241 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R  320 (339)
T 1z57_A          241 EHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKR  320 (339)
T ss_dssp             HHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTS
T ss_pred             HHHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccc
Confidence            32221111110000000                          000000000  11223456789999999999999999


Q ss_pred             CCHHHHHHHH
Q 048419          595 PDMRRVVEFL  604 (653)
Q Consensus       595 Ps~~evl~~L  604 (653)
                      ||+.|++++-
T Consensus       321 pt~~ell~hp  330 (339)
T 1z57_A          321 ITLREALKHP  330 (339)
T ss_dssp             CCHHHHTTSG
T ss_pred             cCHHHHhcCH
Confidence            9999998753

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=100.00  E-value=2.6e-39  Score=344.11  Aligned_cols=275  Identities=25%  Similarity=0.293  Sum_probs=206.3

Q ss_pred             cCHHHHHHhhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc-----------hhhHHHHHHHHHHHhhcCCCc
Q 048419          320 FKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS-----------QQGMKEFVAEIMSMGRLRHRN  388 (653)
Q Consensus       320 f~~~el~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-----------~~~~~~~~~E~~~l~~l~H~n  388 (653)
                      ....++..+.++|...+.||+|+||.||+|.+.. +..||||++....           ....+.+.+|+.++++++|||
T Consensus        12 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~   90 (362)
T 3pg1_A           12 DLIAELHAMQSPYTVQRFISSGSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPN   90 (362)
T ss_dssp             HHHHHHHHTTCSCEEEEEEEEETTEEEEEEECTT-SCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTT
T ss_pred             HHHHHHHHhccceEEeEEeccCCCEEEEEEECCC-CCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcC
Confidence            4467888999999999999999999999999865 8999999985421           122478999999999999999


Q ss_pred             eeeeeeeec-----ccceeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCC
Q 048419          389 LVQLHGWCR-----KQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKP  463 (653)
Q Consensus       389 iv~l~g~~~-----~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp  463 (653)
                      |+++++++.     ....+++||||++ |+|.+++...    ...+++..++.++.||+.||.|||+   ++|+||||||
T Consensus        91 iv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp  162 (362)
T 3pg1_A           91 ILGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQ----RIVISPQHIQYFMYHILLGLHVLHE---AGVVHRDLHP  162 (362)
T ss_dssp             BCCCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCT----TSCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCG
T ss_pred             ccceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHHH---CcCEecCCCh
Confidence            999999983     3346899999997 6888888654    3458999999999999999999999   8999999999


Q ss_pred             CcEEEcCCCcEEEEeecCcccccCCCCCcccccccCCcccCcccccc-CCCCCccceeehHHHHHHHHhCCCCCChhhhh
Q 048419          464 SNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRT-GKATTSTDVYSYGILMLEVACGRRSIEPQKAA  542 (653)
Q Consensus       464 ~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~  542 (653)
                      +|||++.++.+||+|||+++.....  .......||+.|+|||.+.+ ..++.++|||||||++|||++|+.||......
T Consensus       163 ~NIl~~~~~~~kl~Dfg~~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~  240 (362)
T 3pg1_A          163 GNILLADNNDITICDFNLAREDTAD--ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFY  240 (362)
T ss_dssp             GGEEECTTCCEEECCTTC-----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH
T ss_pred             HHEEEcCCCCEEEEecCcccccccc--cccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHH
Confidence            9999999999999999999854332  22334578999999999876 67899999999999999999999999865543


Q ss_pred             hHHHHHHHHHhhhcccc-----------hhHhhhhccCc---C-----CHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 048419          543 AELLLVDWVKELHLEGE-----------ITQAIDQTLDY---Y-----DLAEAELVLNLGLFCSAPNPVYRPDMRRVVEF  603 (653)
Q Consensus       543 ~~~~l~~~~~~~~~~~~-----------~~~~~d~~l~~---~-----~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  603 (653)
                      ....  . +........           ..+.+...+..   .     .......+.+|+.+||+.||.+|||+.|++++
T Consensus       241 ~~~~--~-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  317 (362)
T 3pg1_A          241 NQLN--K-IVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH  317 (362)
T ss_dssp             HHHH--H-HHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             HHHH--H-HHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence            2211  1 111111111           11111111100   0     11123668899999999999999999999987


Q ss_pred             HcCCC
Q 048419          604 LLGDS  608 (653)
Q Consensus       604 L~~~~  608 (653)
                      -.-..
T Consensus       318 p~f~~  322 (362)
T 3pg1_A          318 PYFES  322 (362)
T ss_dssp             GGGTT
T ss_pred             chhhh
Confidence            65443

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=100.00  E-value=5.8e-39  Score=335.84  Aligned_cols=255  Identities=23%  Similarity=0.330  Sum_probs=199.6

Q ss_pred             HhhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc--------hhhHHHHHHHHHHHhhcCCCceeeeeeeecc
Q 048419          327 SVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS--------QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRK  398 (653)
Q Consensus       327 ~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~  398 (653)
                      ...++|...+.||+|+||.||+|.+..+++.||||++....        ......+.+|++++++++||||+++++++..
T Consensus         7 ~l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~   86 (322)
T 2ycf_A            7 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA   86 (322)
T ss_dssp             HHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEES
T ss_pred             hhhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcC
Confidence            34567999999999999999999999999999999986432        1223458899999999999999999999876


Q ss_pred             cceeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCc---EE
Q 048419          399 QDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLN---AK  475 (653)
Q Consensus       399 ~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~---~k  475 (653)
                      .+ .++||||+++++|.+++...     ..+++.+++.++.||+.||.|||+   ++|+||||||+|||++.++.   +|
T Consensus        87 ~~-~~lv~e~~~~~~L~~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~~~~~~k  157 (322)
T 2ycf_A           87 ED-YYIVLELMEGGELFDKVVGN-----KRLKEATCKLYFYQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIK  157 (322)
T ss_dssp             SS-EEEEEECCTTEETHHHHSTT-----CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSSSCCEE
T ss_pred             Cc-eEEEEecCCCCcHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEEecCCCCCeEE
Confidence            55 89999999999999988653     348899999999999999999999   89999999999999987664   99


Q ss_pred             EEeecCcccccCCCCCcccccccCCcccCccccc---cCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHH
Q 048419          476 LGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTR---TGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVK  552 (653)
Q Consensus       476 l~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~  552 (653)
                      |+|||+++.....  .......||+.|+|||++.   ...++.++|||||||++|||++|+.||........  +.+.+.
T Consensus       158 l~Dfg~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~--~~~~~~  233 (322)
T 2ycf_A          158 ITDFGHSKILGET--SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS--LKDQIT  233 (322)
T ss_dssp             ECCCTTCEECCCC--HHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSC--HHHHHH
T ss_pred             EccCccceecccc--cccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHH--HHHHHH
Confidence            9999999875432  2223457899999999874   46788999999999999999999999975433211  111111


Q ss_pred             hhhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 048419          553 ELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEF  603 (653)
Q Consensus       553 ~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  603 (653)
                      .... ....+..    .    .....+.+++.+||+.||.+||++.|++++
T Consensus       234 ~~~~-~~~~~~~----~----~~~~~~~~li~~~l~~dP~~Rps~~~~l~h  275 (322)
T 2ycf_A          234 SGKY-NFIPEVW----A----EVSEKALDLVKKLLVVDPKARFTTEEALRH  275 (322)
T ss_dssp             HTCC-CCCHHHH----T----TSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             hCcc-ccCchhh----h----hcCHHHHHHHHHHcccCHhhCCCHHHHhhC
Confidence            1000 0000000    0    123678899999999999999999999864

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=2.6e-39  Score=347.07  Aligned_cols=266  Identities=22%  Similarity=0.294  Sum_probs=200.9

Q ss_pred             HHHhhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecc------
Q 048419          325 LASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRK------  398 (653)
Q Consensus       325 l~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~------  398 (653)
                      +....++|...+.||+|+||.||+|.+..+|+.||||++......    ..+|++++++++||||+++++++..      
T Consensus         2 l~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~----~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~   77 (383)
T 3eb0_A            2 LETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRY----KNRELDIMKVLDHVNIIKLVDYFYTTGDEEP   77 (383)
T ss_dssp             ----CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTS----CCHHHHHHTTCCCTTBCCEEEEEEEC-----
T ss_pred             CccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcch----HHHHHHHHHHcCCCCccchhheeeecCcccc
Confidence            345678899999999999999999999989999999998654322    2379999999999999999999843      


Q ss_pred             --------------------------------cceeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHH
Q 048419          399 --------------------------------QDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLL  446 (653)
Q Consensus       399 --------------------------------~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~  446 (653)
                                                      ...+++||||++ |+|.+.+...... ...+++..++.++.||++||.
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~-~~~l~~~~~~~i~~qi~~aL~  155 (383)
T 3eb0_A           78 KPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRS-GRSIPMNLISIYIYQLFRAVG  155 (383)
T ss_dssp             --------------------------------CCEEEEEECCCS-EEHHHHHHHHHHT-TCCCCHHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHH
Confidence                                            334889999998 5888877653211 356899999999999999999


Q ss_pred             HHHhcCCCCeEecCCCCCcEEEc-CCCcEEEEeecCcccccCCCCCcccccccCCcccCccccccC-CCCCccceeehHH
Q 048419          447 YLHEECNQRVVHRDVKPSNILLD-TYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTG-KATTSTDVYSYGI  524 (653)
Q Consensus       447 yLH~~~~~~ivH~Dlkp~NIll~-~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~ksDV~s~Gv  524 (653)
                      |||+   ++|+||||||+|||++ .++.+||+|||+++......  ......||+.|+|||.+.+. .++.++||||+||
T Consensus       156 ~LH~---~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~  230 (383)
T 3eb0_A          156 FIHS---LGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE--PSVAYICSRFYRAPELMLGATEYTPSIDLWSIGC  230 (383)
T ss_dssp             HHHT---TTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS--CCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHH
T ss_pred             HHHH---CcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC--CCcCcccCCCccCHHHhcCCCCCCcchhhhhHHH
Confidence            9999   8999999999999998 68899999999998764432  22345789999999998765 4899999999999


Q ss_pred             HHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHh--hhh--------ccCc------CCHHHHHHHHHHHHHcCC
Q 048419          525 LMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQA--IDQ--------TLDY------YDLAEAELVLNLGLFCSA  588 (653)
Q Consensus       525 vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~d~--------~l~~------~~~~~~~~l~~l~~~Cl~  588 (653)
                      ++|||++|+.||......+..  ...+.... .......  .++        .+..      .+......+.+|+.+||+
T Consensus       231 il~ell~g~~pf~~~~~~~~~--~~i~~~~g-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  307 (383)
T 3eb0_A          231 VFGELILGKPLFSGETSIDQL--VRIIQIMG-TPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILR  307 (383)
T ss_dssp             HHHHHHHSSCSSCCSSHHHHH--HHHHHHHC-CCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCC
T ss_pred             HHHHHHhCCCCCCCCChHHHH--HHHHHHhC-CCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHcc
Confidence            999999999999875543321  11111111 0000000  000        0000      111234668999999999


Q ss_pred             CCCCCCCCHHHHHHHH
Q 048419          589 PNPVYRPDMRRVVEFL  604 (653)
Q Consensus       589 ~dP~~RPs~~evl~~L  604 (653)
                      .||.+|||+.|++++-
T Consensus       308 ~dP~~R~t~~e~l~hp  323 (383)
T 3eb0_A          308 YEPDLRINPYEAMAHP  323 (383)
T ss_dssp             SSGGGSCCHHHHHTSG
T ss_pred             CChhhCCCHHHHhcCH
Confidence            9999999999999754

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=100.00  E-value=1.4e-39  Score=339.29  Aligned_cols=264  Identities=22%  Similarity=0.320  Sum_probs=199.6

Q ss_pred             hcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeec-----------
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR-----------  397 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~-----------  397 (653)
                      .++|...+.||+|+||.||+|.+..+++.||||++........+.+.+|++++++++||||+++++++.           
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~   89 (320)
T 2i6l_A           10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG   89 (320)
T ss_dssp             TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred             CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence            467889999999999999999999889999999998777777888999999999999999999998873           


Q ss_pred             ---ccceeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEc-CCCc
Q 048419          398 ---KQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLD-TYLN  473 (653)
Q Consensus       398 ---~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~-~~~~  473 (653)
                         +.+..++||||++ |+|.+++...      .+++..++.++.|+++||+|||+   ++|+||||||+|||++ +++.
T Consensus        90 ~~~~~~~~~lv~e~~~-~~L~~~~~~~------~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~  159 (320)
T 2i6l_A           90 SLTELNSVYIVQEYME-TDLANVLEQG------PLLEEHARLFMYQLLRGLKYIHS---ANVLHRDLKPANLFINTEDLV  159 (320)
T ss_dssp             -CCSCSEEEEEEECCS-EEHHHHHTTC------CCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEEETTTTE
T ss_pred             cccccCceeEEeeccC-CCHHHHhhcC------CccHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCCCe
Confidence               4467899999997 6999998542      38899999999999999999999   8999999999999997 5679


Q ss_pred             EEEEeecCcccccCCCC--CcccccccCCcccCcccccc-CCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHH
Q 048419          474 AKLGDFGLAKIYEHGAN--PQTTHIVGTLGYLAPELTRT-GKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDW  550 (653)
Q Consensus       474 ~kl~DfGla~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~  550 (653)
                      +||+|||+++.......  .......++..|+|||.+.+ ..++.++|||||||++|||++|+.||..........  ..
T Consensus       160 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~--~~  237 (320)
T 2i6l_A          160 LKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQ--LI  237 (320)
T ss_dssp             EEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH--HH
T ss_pred             EEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHH--HH
Confidence            99999999987643211  12233467899999998865 678999999999999999999999998655432211  11


Q ss_pred             HHhhhc--ccc-------hhHhhhhcc--CcCC-----HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          551 VKELHL--EGE-------ITQAIDQTL--DYYD-----LAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       551 ~~~~~~--~~~-------~~~~~d~~l--~~~~-----~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                      ......  ...       +...+....  ....     ......+.+++.+||+.||.+|||+.|++++-
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp  307 (320)
T 2i6l_A          238 LESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHP  307 (320)
T ss_dssp             HHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTSH
T ss_pred             HHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCCc
Confidence            111000  000       000011111  0001     11246789999999999999999999999854

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=100.00  E-value=9.5e-39  Score=341.18  Aligned_cols=262  Identities=22%  Similarity=0.240  Sum_probs=197.5

Q ss_pred             hcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC--chhhHHHHHHHHHHHhhcCCCceeeeeeeecccc------
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQD------  400 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~------  400 (653)
                      .++|...+.||+|+||.||+|.+..+++.||||++...  .....+.+.+|+.++++++||||+++++++...+      
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~  103 (371)
T 2xrw_A           24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ  103 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred             hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence            46899999999999999999999989999999999653  3445677889999999999999999999987654      


Q ss_pred             eeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeec
Q 048419          401 ELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFG  480 (653)
Q Consensus       401 ~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG  480 (653)
                      ..++||||+++ +|.+++..       .+++..+..++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||
T Consensus       104 ~~~lv~e~~~~-~l~~~~~~-------~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg  172 (371)
T 2xrw_A          104 DVYIVMELMDA-NLCQVIQM-------ELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFG  172 (371)
T ss_dssp             EEEEEEECCSE-EHHHHHHS-------CCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECCCC
T ss_pred             ceEEEEEcCCC-CHHHHHhh-------ccCHHHHHHHHHHHHHHHHHHHH---CCeecccCCHHHEEEcCCCCEEEEEee
Confidence            78999999974 78777742       37889999999999999999999   899999999999999999999999999


Q ss_pred             CcccccCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhc----
Q 048419          481 LAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHL----  556 (653)
Q Consensus       481 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~----  556 (653)
                      +++.....  .......||+.|+|||++.+..++.++|||||||++|||++|+.||..........  ..+.....    
T Consensus       173 ~a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~--~i~~~~~~~~~~  248 (371)
T 2xrw_A          173 LARTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWN--KVIEQLGTPCPE  248 (371)
T ss_dssp             C------------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH--HHHC-CCCCCHH
T ss_pred             cccccccc--cccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHH--HHHHHhCCCCHH
Confidence            99865432  12334578999999999999899999999999999999999999998654432111  11000000    


Q ss_pred             --------------------ccchhHhhhhcc-C---cCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          557 --------------------EGEITQAIDQTL-D---YYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       557 --------------------~~~~~~~~d~~l-~---~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                                          ...........+ .   .........+.+|+.+||+.||.+|||+.|++++-.
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~  321 (371)
T 2xrw_A          249 FMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPY  321 (371)
T ss_dssp             HHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSHH
T ss_pred             HHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCcc
Confidence                                000000000000 0   001123577999999999999999999999998653

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=100.00  E-value=7.4e-39  Score=352.31  Aligned_cols=259  Identities=20%  Similarity=0.251  Sum_probs=206.2

Q ss_pred             hcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCC-CceeeeeeeecccceeEEEEe
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRH-RNLVQLHGWCRKQDELLLVYD  407 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H-~niv~l~g~~~~~~~~~lV~E  407 (653)
                      .++|...++||+|+||.||+|.+..+++.||||++.....  ...+..|+++++.|+| +++..+..++.+.+..+||||
T Consensus         6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme   83 (483)
T 3sv0_A            6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMD   83 (483)
T ss_dssp             TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred             CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEE
Confidence            4689999999999999999999988899999998865432  2357889999999987 556666666777788999999


Q ss_pred             ccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEE---cCCCcEEEEeecCccc
Q 048419          408 YVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILL---DTYLNAKLGDFGLAKI  484 (653)
Q Consensus       408 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~DfGla~~  484 (653)
                      |+ +++|.+++....    ..+++.+++.|+.||+.||.|||+   ++|+||||||+||||   +.++.+||+|||+++.
T Consensus        84 ~~-g~sL~~ll~~~~----~~l~~~~~~~i~~qi~~aL~yLH~---~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~  155 (483)
T 3sv0_A           84 LL-GPSLEDLFNFCS----RKLSLKTVLMLADQMINRVEFVHS---KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKK  155 (483)
T ss_dssp             CC-CCBHHHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECCGGGTTCEEECCCTTCEE
T ss_pred             CC-CCCHHHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccCcceEEEecCCCCCeEEEEeCCccee
Confidence            99 999999997542    358999999999999999999999   899999999999999   6889999999999987


Q ss_pred             ccCCCCC------cccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhccc
Q 048419          485 YEHGANP------QTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEG  558 (653)
Q Consensus       485 ~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~  558 (653)
                      .......      ......||+.|+|||.+.+..++.++|||||||+||||++|+.||..............+.......
T Consensus       156 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~  235 (483)
T 3sv0_A          156 YRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVAT  235 (483)
T ss_dssp             CBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHS
T ss_pred             ccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccccc
Confidence            6543221      1235679999999999999999999999999999999999999998654322222222221111111


Q ss_pred             chhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          559 EITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       559 ~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                      .+..+.    ..    ....+.+|+..||+.+|.+||++.+|+++|+
T Consensus       236 ~~~~l~----~~----~p~~l~~li~~cl~~dP~~RPs~~el~~~L~  274 (483)
T 3sv0_A          236 SIEALC----RG----YPTEFASYFHYCRSLRFDDKPDYSYLKRLFR  274 (483)
T ss_dssp             CHHHHH----TT----SCHHHHHHHHHHHTCCTTCCCCHHHHHHHHH
T ss_pred             cHHHHh----cC----CcHHHHHHHHHHhcCChhhCcCHHHHHHHHH
Confidence            111111    11    2357899999999999999999999998875

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=100.00  E-value=6.2e-39  Score=331.47  Aligned_cols=257  Identities=25%  Similarity=0.407  Sum_probs=198.3

Q ss_pred             hhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecc---------
Q 048419          328 VTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRK---------  398 (653)
Q Consensus       328 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~---------  398 (653)
                      ..++|+..+.||+|+||.||+|.+..+++.||||++.. .....+.+.+|+.++++++||||+++++++.+         
T Consensus         4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~   82 (303)
T 1zy4_A            4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRH-TEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMT   82 (303)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEE-EHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC---
T ss_pred             ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEec-cHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhc
Confidence            35678899999999999999999988899999999954 33456788999999999999999999998754         


Q ss_pred             ----cceeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcE
Q 048419          399 ----QDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNA  474 (653)
Q Consensus       399 ----~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~  474 (653)
                          .+..++||||+++++|.+++....    ..+++.+++.++.|+++||+|||+   ++|+||||||+|||++.++.+
T Consensus        83 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dlkp~Nil~~~~~~~  155 (303)
T 1zy4_A           83 AVKKKSTLFIQMEYCENGTLYDLIHSEN----LNQQRDEYWRLFRQILEALSYIHS---QGIIHRDLKPMNIFIDESRNV  155 (303)
T ss_dssp             ---CEEEEEEEEECCCSCBHHHHHHHSC----GGGCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCE
T ss_pred             ccccCCceEEEEecCCCCCHHHhhhccc----cccchHHHHHHHHHHHHHHHHHHh---CCeecccCCHHhEEEcCCCCE
Confidence                457899999999999999997643    347888999999999999999999   899999999999999999999


Q ss_pred             EEEeecCcccccCCC-------------CCcccccccCCcccCccccccC-CCCCccceeehHHHHHHHHhCCCCCChhh
Q 048419          475 KLGDFGLAKIYEHGA-------------NPQTTHIVGTLGYLAPELTRTG-KATTSTDVYSYGILMLEVACGRRSIEPQK  540 (653)
Q Consensus       475 kl~DfGla~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~~-~~~~ksDV~s~Gvvl~elltG~~p~~~~~  540 (653)
                      ||+|||+++......             ........|++.|+|||.+.+. .++.++|||||||++|||++   |+....
T Consensus       156 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~  232 (303)
T 1zy4_A          156 KIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGM  232 (303)
T ss_dssp             EECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHH
T ss_pred             EEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCch
Confidence            999999998654321             1122345689999999998754 68999999999999999998   554322


Q ss_pred             hhhHHHHHHHHHhhhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          541 AAAELLLVDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       541 ~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                      ...  .....+...  ....       ...........+.+++.+||+.||.+|||+.|++++-.-
T Consensus       233 ~~~--~~~~~~~~~--~~~~-------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~  287 (303)
T 1zy4_A          233 ERV--NILKKLRSV--SIEF-------PPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWL  287 (303)
T ss_dssp             HHH--HHHHHHHST--TCCC-------CTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHSSCS
T ss_pred             hHH--HHHHhcccc--cccc-------CccccccchHHHHHHHHHHHhcCcccCcCHHHHhCCCCc
Confidence            211  111111110  0000       012222334668899999999999999999999986543

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=100.00  E-value=1.2e-39  Score=347.39  Aligned_cols=265  Identities=23%  Similarity=0.304  Sum_probs=190.4

Q ss_pred             hhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC--chhhHHHHHHHHHHHhhcCCCceeeeeeeeccc------
Q 048419          328 VTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQ------  399 (653)
Q Consensus       328 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~------  399 (653)
                      ..++|...+.||+|+||.||+|.+..+|+.||||++...  .....+.+.+|+.++++++||||+++++++...      
T Consensus        27 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~  106 (367)
T 2fst_X           27 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF  106 (367)
T ss_dssp             EETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGC
T ss_pred             CCCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccC
Confidence            346889999999999999999999999999999998653  334567888999999999999999999998654      


Q ss_pred             ceeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEee
Q 048419          400 DELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDF  479 (653)
Q Consensus       400 ~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df  479 (653)
                      ...++|+|++ +++|.+++...      .+++..++.++.||++||.|||+   ++|+||||||+|||++.++.+||+||
T Consensus       107 ~~~~lv~e~~-~~~L~~~~~~~------~l~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kL~DF  176 (367)
T 2fst_X          107 NDVYLVTHLM-GADLNNIVKCQ------KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDF  176 (367)
T ss_dssp             CCCEEEEECC-CEECC-----C------CCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECC-
T ss_pred             CeEEEEeccc-CCCHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHhhEEECCCCCEEEeec
Confidence            5679999999 78999988642      38999999999999999999999   89999999999999999999999999


Q ss_pred             cCcccccCCCCCcccccccCCcccCcccccc-CCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHh-----
Q 048419          480 GLAKIYEHGANPQTTHIVGTLGYLAPELTRT-GKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKE-----  553 (653)
Q Consensus       480 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~-----  553 (653)
                      |+++....    ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.................     
T Consensus       177 G~a~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~  252 (367)
T 2fst_X          177 GLARHTAD----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE  252 (367)
T ss_dssp             ------------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHH
T ss_pred             cccccccc----cCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHH
Confidence            99986543    2334578999999999876 6789999999999999999999999986554332211110000     


Q ss_pred             ---hhcccchhHhhhhcc--CcCCH-----HHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          554 ---LHLEGEITQAIDQTL--DYYDL-----AEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       554 ---~~~~~~~~~~~d~~l--~~~~~-----~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                         ..........+....  .....     .....+.+|+.+||+.||.+|||+.|++++-..
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~hp~~  315 (367)
T 2fst_X          253 LLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF  315 (367)
T ss_dssp             HHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGG
T ss_pred             HHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcChhh
Confidence               000000111111100  01111     123568899999999999999999999987643

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=100.00  E-value=5.8e-39  Score=367.69  Aligned_cols=250  Identities=22%  Similarity=0.308  Sum_probs=208.6

Q ss_pred             hcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC---chhhHHHHHHHHHHHhhc-CCCceeeeeeeecccceeEE
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN---SQQGMKEFVAEIMSMGRL-RHRNLVQLHGWCRKQDELLL  404 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~l  404 (653)
                      .++|...++||+|+||.||+|.+..+++.||||++...   .....+.+..|..++..+ +|++|+++++++.+.+.++|
T Consensus       340 ~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~l  419 (674)
T 3pfq_A          340 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF  419 (674)
T ss_dssp             CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEE
T ss_pred             ccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEE
Confidence            35799999999999999999999999999999999643   233456788899999988 79999999999999999999


Q ss_pred             EEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccc
Q 048419          405 VYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKI  484 (653)
Q Consensus       405 V~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~  484 (653)
                      ||||+++|+|.+++...     ..+++.+++.++.||+.||+|||+   ++|+||||||+||||+.++.+||+|||+++.
T Consensus       420 V~E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~---~gIiHrDLKp~NILl~~~g~ikL~DFGla~~  491 (674)
T 3pfq_A          420 VMEYVNGGDLMYHIQQV-----GRFKEPHAVFYAAEIAIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKE  491 (674)
T ss_dssp             EEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TSEECCCCCSTTEEECSSSCEEECCCTTCEE
T ss_pred             EEeCcCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCeEeccCChhhEEEcCCCcEEEeecceeec
Confidence            99999999999999764     348999999999999999999999   8999999999999999999999999999986


Q ss_pred             ccCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhh
Q 048419          485 YEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAI  564 (653)
Q Consensus       485 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  564 (653)
                      ..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||......+   +.+.+..    .      
T Consensus       492 ~~~~~-~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~---~~~~i~~----~------  557 (674)
T 3pfq_A          492 NIWDG-VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE---LFQSIME----H------  557 (674)
T ss_dssp             CCCTT-CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHHHHHS----S------
T ss_pred             cccCC-cccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHH---HHHHHHh----C------
Confidence            43222 23445689999999999999999999999999999999999999998654322   1111111    0      


Q ss_pred             hhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCH-----HHHHHH
Q 048419          565 DQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDM-----RRVVEF  603 (653)
Q Consensus       565 d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~-----~evl~~  603 (653)
                        .+ .++......+.+|+.+||+.||.+||++     .||+++
T Consensus       558 --~~-~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h  598 (674)
T 3pfq_A          558 --NV-AYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH  598 (674)
T ss_dssp             --CC-CCCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSS
T ss_pred             --CC-CCCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcC
Confidence              01 1122234678899999999999999997     788764

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=100.00  E-value=6.8e-39  Score=333.77  Aligned_cols=254  Identities=26%  Similarity=0.378  Sum_probs=203.7

Q ss_pred             hhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEe
Q 048419          328 VTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYD  407 (653)
Q Consensus       328 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E  407 (653)
                      ..++|...+.||+|+||.||+|.+..+|+.||||.+....  ..+.+.+|+.++++++||||+++++++...+..++|||
T Consensus        27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  104 (314)
T 3com_A           27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVME  104 (314)
T ss_dssp             ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEee
Confidence            4567999999999999999999999889999999996543  34678899999999999999999999999999999999


Q ss_pred             ccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccC
Q 048419          408 YVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEH  487 (653)
Q Consensus       408 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~  487 (653)
                      |+++++|.+++...    ...+++.+++.++.||+.||.|||+   .+++|+||||+||+++.++.+||+|||++.....
T Consensus       105 ~~~~~~L~~~~~~~----~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~  177 (314)
T 3com_A          105 YCGAGSVSDIIRLR----NKTLTEDEIATILQSTLKGLEYLHF---MRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTD  177 (314)
T ss_dssp             CCTTEEHHHHHHHH----TCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECBT
T ss_pred             cCCCCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHh---CCCcCCCcCHHHEEECCCCCEEEeecccchhhhh
Confidence            99999999998643    2458999999999999999999999   8999999999999999999999999999987643


Q ss_pred             CCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhc
Q 048419          488 GANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQT  567 (653)
Q Consensus       488 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~  567 (653)
                      .. .......|++.|+|||.+.+..++.++||||||+++|||++|+.||..........   .+... .        .+.
T Consensus       178 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~---~~~~~-~--------~~~  244 (314)
T 3com_A          178 TM-AKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIF---MIPTN-P--------PPT  244 (314)
T ss_dssp             TB-SCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH---HHHHS-C--------CCC
T ss_pred             hc-cccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHH---HHhcC-C--------Ccc
Confidence            22 12234578999999999999899999999999999999999999997654322111   00000 0        000


Q ss_pred             cCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          568 LDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       568 l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                      . .........+.+++.+||+.||.+|||+.+++++-
T Consensus       245 ~-~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~~  280 (314)
T 3com_A          245 F-RKPELWSDNFTDFVKQCLVKSPEQRATATQLLQHP  280 (314)
T ss_dssp             C-SSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTSH
T ss_pred             c-CCcccCCHHHHHHHHHHccCChhhCcCHHHHHhCH
Confidence            0 00111235688999999999999999999999754

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=100.00  E-value=5.1e-39  Score=341.36  Aligned_cols=273  Identities=25%  Similarity=0.294  Sum_probs=196.4

Q ss_pred             HHHHHhhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccce-
Q 048419          323 AELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDE-  401 (653)
Q Consensus       323 ~el~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~-  401 (653)
                      .+.....++|...+.||+|+||.||+|.+..+++.||||++.... .....+.+|++.++.++||||+++++++...+. 
T Consensus        16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~   94 (360)
T 3e3p_A           16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGER   94 (360)
T ss_dssp             HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSS
T ss_pred             hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhccccc
Confidence            445566789999999999999999999999889999999985432 233456788888999999999999999865433 


Q ss_pred             ------eEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHH--hcCCCCeEecCCCCCcEEEcC-CC
Q 048419          402 ------LLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLH--EECNQRVVHRDVKPSNILLDT-YL  472 (653)
Q Consensus       402 ------~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH--~~~~~~ivH~Dlkp~NIll~~-~~  472 (653)
                            .++||||+++ +|...+..... ....+++..++.++.|++.||.|||  +   ++|+||||||+|||++. ++
T Consensus        95 ~~~~~~~~lv~e~~~~-~l~~~~~~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~~---~~ivH~Dlkp~NIll~~~~~  169 (360)
T 3e3p_A           95 DRRDIYLNVVMEYVPD-TLHRCCRNYYR-RQVAPPPILIKVFLFQLIRSIGCLHLPS---VNVCHRDIKPHNVLVNEADG  169 (360)
T ss_dssp             CTTCEEEEEEEECCSC-BHHHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHTSTT---TCCBCSCCCGGGEEEETTTT
T ss_pred             cccceeEEEEeecccc-cHHHHHHHHhh-cccCCCHHHHHHHHHHHHHHHHHHhCCC---CCeecCcCCHHHEEEeCCCC
Confidence                  7899999976 55554433211 1345888999999999999999999  7   89999999999999986 89


Q ss_pred             cEEEEeecCcccccCCCCCcccccccCCcccCccccccC-CCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHH
Q 048419          473 NAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTG-KATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWV  551 (653)
Q Consensus       473 ~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~  551 (653)
                      .+||+|||+++......  ......||+.|+|||.+.+. .++.++|||||||++|||++|+.||.........  ...+
T Consensus       170 ~~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~--~~~~  245 (360)
T 3e3p_A          170 TLKLCDFGSAKKLSPSE--PNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQL--HEIV  245 (360)
T ss_dssp             EEEECCCTTCBCCCTTS--CCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH--HHHH
T ss_pred             cEEEeeCCCceecCCCC--CcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHH--HHHH
Confidence            99999999998765432  22345789999999998655 4899999999999999999999999875543221  1222


Q ss_pred             Hhhhcc-cchhHhhhhc-----------------cCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          552 KELHLE-GEITQAIDQT-----------------LDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       552 ~~~~~~-~~~~~~~d~~-----------------l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                      ...... ......+++.                 ...........+.+|+.+||+.||.+|||+.|++++-.
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~  317 (360)
T 3e3p_A          246 RVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPY  317 (360)
T ss_dssp             HHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGG
T ss_pred             HHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCcc
Confidence            111100 0011111110                 01111224578999999999999999999999998764

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=100.00  E-value=6.9e-40  Score=339.03  Aligned_cols=267  Identities=25%  Similarity=0.350  Sum_probs=189.2

Q ss_pred             hhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc-hhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEE
Q 048419          328 VTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS-QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVY  406 (653)
Q Consensus       328 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  406 (653)
                      ..++|...+.||+|+||.||+|.+..+++.||||++.... ....+.+.+|+.++++++||||+++++++...+..++||
T Consensus        13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   92 (303)
T 2vwi_A           13 NRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVM   92 (303)
T ss_dssp             CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEE
T ss_pred             chhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEe
Confidence            3468999999999999999999998889999999986542 344567889999999999999999999999999999999


Q ss_pred             eccCCCCchhhhhccccc---ccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcc
Q 048419          407 DYVPNGSLDKLLFDKDHK---LRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK  483 (653)
Q Consensus       407 E~~~~gsL~~~l~~~~~~---~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~  483 (653)
                      ||+++++|.+++......   ....+++..++.++.||+.||.|||+   ++++||||||+||+++.++.+||+|||++.
T Consensus        93 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~  169 (303)
T 2vwi_A           93 KLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHK---NGQIHRDVKAGNILLGEDGSVQIADFGVSA  169 (303)
T ss_dssp             ECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTCCEEECCCHHHH
T ss_pred             hhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHh---CCCCCCCCChhhEEEcCCCCEEEEeccchh
Confidence            999999999998752110   13458999999999999999999999   899999999999999999999999999998


Q ss_pred             cccCCCC----CcccccccCCcccCcccccc-CCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhccc
Q 048419          484 IYEHGAN----PQTTHIVGTLGYLAPELTRT-GKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEG  558 (653)
Q Consensus       484 ~~~~~~~----~~~~~~~gt~~y~aPE~~~~-~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~  558 (653)
                      .......    .......||+.|+|||.+.+ ..++.++|||||||++|||++|+.||..........   ...... ..
T Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~---~~~~~~-~~  245 (303)
T 2vwi_A          170 FLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLM---LTLQND-PP  245 (303)
T ss_dssp             HCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHH---HHHTSS-CC
T ss_pred             eeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHH---HHhccC-CC
Confidence            6543211    11233568999999999875 568999999999999999999999998654332111   000000 00


Q ss_pred             chh-HhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          559 EIT-QAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       559 ~~~-~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                      ... ...++.+   .......+.+++.+||+.||.+||++.|++++-
T Consensus       246 ~~~~~~~~~~~---~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~  289 (303)
T 2vwi_A          246 SLETGVQDKEM---LKKYGKSFRKMISLCLQKDPEKRPTAAELLRHK  289 (303)
T ss_dssp             CTTC-----CC---CCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTST
T ss_pred             ccccccccchh---hhhhhHHHHHHHHHHccCChhhCcCHHHHhhCh
Confidence            000 0111111   011235688999999999999999999999854

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=100.00  E-value=6.4e-39  Score=348.16  Aligned_cols=262  Identities=26%  Similarity=0.347  Sum_probs=198.3

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeeccc------ceeE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQ------DELL  403 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~------~~~~  403 (653)
                      .+|...+.||+|+||.||+|++..+++.||||++.....    ...+|++++++++|+||++++++|...      ..++
T Consensus        54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~  129 (420)
T 1j1b_A           54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN  129 (420)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEE
T ss_pred             ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch----hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEE
Confidence            457888999999999999999998899999999864422    234799999999999999999988432      2467


Q ss_pred             EEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCC-CcEEEEeecCc
Q 048419          404 LVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTY-LNAKLGDFGLA  482 (653)
Q Consensus       404 lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~-~~~kl~DfGla  482 (653)
                      +||||+++ +|.+.+..... ....+++..++.++.||++||.|||+   ++|+||||||+||||+.+ +.+||+|||++
T Consensus       130 lv~e~~~~-~l~~~~~~~~~-~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NILl~~~~~~~kl~DFG~a  204 (420)
T 1j1b_A          130 LVLDYVPE-TVYRVARHYSR-AKQTLPVIYVKLYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSA  204 (420)
T ss_dssp             EEEECCCE-EHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCSGGGEEEETTTTEEEECCCTTC
T ss_pred             eehhcccc-cHHHHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChhhEEEeCCCCeEEeccchhh
Confidence            99999975 66666543211 13568999999999999999999999   899999999999999965 56899999999


Q ss_pred             ccccCCCCCcccccccCCcccCccccccC-CCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcc--cc
Q 048419          483 KIYEHGANPQTTHIVGTLGYLAPELTRTG-KATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLE--GE  559 (653)
Q Consensus       483 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~--~~  559 (653)
                      +......  ......||+.|+|||++.+. .++.++|||||||++|||++|+.||......+.  +.+.+......  ..
T Consensus       205 ~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~--l~~i~~~lg~p~~~~  280 (420)
T 1j1b_A          205 KQLVRGE--PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQ--LVEIIKVLGTPTREQ  280 (420)
T ss_dssp             EECCTTC--CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHHHHHCSCCHHH
T ss_pred             hhcccCC--CceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHHHhCCCCHHH
Confidence            8764432  22345789999999998764 789999999999999999999999986554322  22222211100  00


Q ss_pred             hhHhhhh--------ccCc------CCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          560 ITQAIDQ--------TLDY------YDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       560 ~~~~~d~--------~l~~------~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                      +.+ ..+        .+..      +.......+.+|+.+||+.||.+||++.|++++-.
T Consensus       281 ~~~-~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~  339 (420)
T 1j1b_A          281 IRE-MNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF  339 (420)
T ss_dssp             HHH-HCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGG
T ss_pred             HHh-hChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCHh
Confidence            110 011        0000      11122467899999999999999999999998653

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=100.00  E-value=2.2e-39  Score=333.39  Aligned_cols=257  Identities=26%  Similarity=0.411  Sum_probs=198.0

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCC-CC--cEEEEEEeccC---chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPS-LG--LEVAIKRIGHN---SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELL  403 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~-~~--~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~  403 (653)
                      ++|+..+.||+|+||.||+|.+.. ++  ..||||++...   ..+..+.+.+|+.++++++||||+++++++...+ .+
T Consensus        18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~   96 (291)
T 1u46_A           18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MK   96 (291)
T ss_dssp             GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CE
T ss_pred             hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ce
Confidence            578889999999999999998632 23  36899998654   3445678999999999999999999999998765 89


Q ss_pred             EEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcc
Q 048419          404 LVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK  483 (653)
Q Consensus       404 lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~  483 (653)
                      +|+||+++++|.+++....    ..+++.+++.++.|+++||.|||+   ++++|+||||+||+++.++.+||+|||++.
T Consensus        97 ~v~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nili~~~~~~kl~Dfg~~~  169 (291)
T 1u46_A           97 MVTELAPLGSLLDRLRKHQ----GHFLLGTLSRYAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMR  169 (291)
T ss_dssp             EEEECCTTCBHHHHHHHHG----GGSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEEEETTEEEECCCTTCE
T ss_pred             eeEecccCCCHHHHHHhcc----CCcCHHHHHHHHHHHHHHHHHHHh---CCcccCCCchheEEEcCCCCEEEccccccc
Confidence            9999999999999997642    458899999999999999999999   899999999999999999999999999998


Q ss_pred             cccCCCCC--cccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhhcccch
Q 048419          484 IYEHGANP--QTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELHLEGEI  560 (653)
Q Consensus       484 ~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~  560 (653)
                      ........  ......++..|+|||.+.+..++.++||||||+++|||++ |+.||.......   +...+..   ... 
T Consensus       170 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~---~~~~~~~---~~~-  242 (291)
T 1u46_A          170 ALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQ---ILHKIDK---EGE-  242 (291)
T ss_dssp             ECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH---HHHHHHT---SCC-
T ss_pred             cccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHH---HHHHHHc---cCC-
Confidence            76543221  1223457788999999988889999999999999999999 999997654322   1111111   000 


Q ss_pred             hHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcCCC
Q 048419          561 TQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLGDS  608 (653)
Q Consensus       561 ~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  608 (653)
                            . ..........+.+++.+||+.||.+||++.+++++|+...
T Consensus       243 ------~-~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~  283 (291)
T 1u46_A          243 ------R-LPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQ  283 (291)
T ss_dssp             ------C-CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred             ------C-CCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhC
Confidence                  0 0011123467889999999999999999999999997643

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=100.00  E-value=2.2e-38  Score=339.66  Aligned_cols=274  Identities=19%  Similarity=0.231  Sum_probs=212.3

Q ss_pred             cCHHHHHHhhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcC-CC-----ceeeee
Q 048419          320 FKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLR-HR-----NLVQLH  393 (653)
Q Consensus       320 f~~~el~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~-----niv~l~  393 (653)
                      +...+.....++|...+.||+|+||.||+|.+..+++.||||++... ....+.+..|+.+++.++ |+     ++++++
T Consensus        44 ~~~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~  122 (382)
T 2vx3_A           44 YIVKNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLK  122 (382)
T ss_dssp             BCCCTTCEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEE
T ss_pred             EEeecCCEeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEee
Confidence            44455556678999999999999999999999988999999999643 334567788888888885 44     499999


Q ss_pred             eeecccceeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEE--cCC
Q 048419          394 GWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILL--DTY  471 (653)
Q Consensus       394 g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll--~~~  471 (653)
                      +++...+..++||||++ ++|.+++....   ...+++..++.++.|++.||.|||.. ..+|+||||||+|||+  +.+
T Consensus       123 ~~~~~~~~~~lv~e~~~-~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~  197 (382)
T 2vx3_A          123 RHFMFRNHLCLVFEMLS-YNLYDLLRNTN---FRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKR  197 (382)
T ss_dssp             EEEEETTEEEEEEECCC-CBHHHHHHHTT---TSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTS
T ss_pred             eeeccCCceEEEEecCC-CCHHHHHhhcC---cCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCC
Confidence            99999999999999996 59999997654   24589999999999999999999941 2789999999999999  457


Q ss_pred             CcEEEEeecCcccccCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHH
Q 048419          472 LNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWV  551 (653)
Q Consensus       472 ~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~  551 (653)
                      +.+||+|||+++.....    .....||+.|+|||++.+..++.++|||||||++|||++|+.||......+...  ..+
T Consensus       198 ~~~kL~DFG~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~--~i~  271 (382)
T 2vx3_A          198 SAIKIVDFGSSCQLGQR----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMN--KIV  271 (382)
T ss_dssp             CCEEECCCTTCEETTCC----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH--HHH
T ss_pred             CcEEEEeccCceecccc----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH--HHH
Confidence            88999999999876432    234578999999999999999999999999999999999999998655433211  111


Q ss_pred             Hhhhcc--------cchhHhhhhc----------------------------------------c--CcCCHHHHHHHHH
Q 048419          552 KELHLE--------GEITQAIDQT----------------------------------------L--DYYDLAEAELVLN  581 (653)
Q Consensus       552 ~~~~~~--------~~~~~~~d~~----------------------------------------l--~~~~~~~~~~l~~  581 (653)
                      ......        ....+.++..                                        .  ......+...+.+
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  351 (382)
T 2vx3_A          272 EVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKD  351 (382)
T ss_dssp             HHHCSCCHHHHTTCTTHHHHEEECTTSCEEECCCCTTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHHHHHHHH
T ss_pred             HHhCCCCHHHHHhhHHHHHHHHhccccccccccccccccccCCcchhhHHHHhhccccCCCccccccccccchhhHHHHH
Confidence            110000        0000000000                                        0  0112344568999


Q ss_pred             HHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          582 LGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       582 l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                      |+.+||+.||.+|||+.|++++-.
T Consensus       352 li~~mL~~dP~~Rpta~e~L~hp~  375 (382)
T 2vx3_A          352 LILRMLDYDPKTRIQPYYALQHSF  375 (382)
T ss_dssp             HHHHHTCSCTTTSCCHHHHTTSGG
T ss_pred             HHHHhcCCChhhCCCHHHHhcCcc
Confidence            999999999999999999998654

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=100.00  E-value=1.3e-39  Score=347.88  Aligned_cols=255  Identities=12%  Similarity=0.036  Sum_probs=185.6

Q ss_pred             hcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc---hhhHHHHHHHHHHHhhc--CCCceeeee-------eee
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS---QQGMKEFVAEIMSMGRL--RHRNLVQLH-------GWC  396 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l--~H~niv~l~-------g~~  396 (653)
                      ...|...+.||+|+||.||+|.+..+++.||||++....   ....+.+.+|+.+++.|  +||||++++       +++
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~  140 (371)
T 3q60_A           61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAV  140 (371)
T ss_dssp             EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEE
T ss_pred             ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhe
Confidence            345888999999999999999999889999999997653   23456677885555555  699988855       333


Q ss_pred             ccc-----------------ceeEEEEeccCCCCchhhhhcccccccccchhhhH------HHHHHHHHHHHHHHHhcCC
Q 048419          397 RKQ-----------------DELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQR------YKILIGIAQSLLYLHEECN  453 (653)
Q Consensus       397 ~~~-----------------~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~------~~i~~~ia~~L~yLH~~~~  453 (653)
                      ...                 ..+++||||++ |+|.+++....    ..+++..+      +.++.||++||+|||+   
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~----~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~---  212 (371)
T 3q60_A          141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLD----FVYVFRGDEGILALHILTAQLIRLAANLQS---  212 (371)
T ss_dssp             EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHH----HSCCCCHHHHHHHHHHHHHHHHHHHHHHHH---
T ss_pred             ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhc----cccchhhhhhhhhHHHHHHHHHHHHHHHHH---
Confidence            221                 34899999998 89999997753    23566666      7888999999999999   


Q ss_pred             CCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCCCCcccccccCCcccCcccccc--CCCCCccceeehHHHHHHHHh
Q 048419          454 QRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRT--GKATTSTDVYSYGILMLEVAC  531 (653)
Q Consensus       454 ~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~ksDV~s~Gvvl~ellt  531 (653)
                      ++|+||||||+|||++.++.+||+|||+++....    ......+|+.|+|||++.+  ..++.++|||||||++|||++
T Consensus       213 ~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~ellt  288 (371)
T 3q60_A          213 KGLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGT----RGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWC  288 (371)
T ss_dssp             TTEEETTCSGGGEEECTTSCEEECCGGGEEETTC----EEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHH
T ss_pred             CCCccCcCCHHHEEECCCCCEEEEecceeeecCC----CccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHh
Confidence            8999999999999999999999999999986532    2224467799999999987  679999999999999999999


Q ss_pred             CCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhcc-CcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 048419          532 GRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTL-DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEF  603 (653)
Q Consensus       532 G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l-~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  603 (653)
                      |+.||.........        .+............. ..........+.+|+.+||+.||.+|||+.|++++
T Consensus       289 g~~Pf~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  353 (371)
T 3q60_A          289 LFLPFGLVTPGIKG--------SWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMET  353 (371)
T ss_dssp             SSCSTTBCCTTCTT--------CCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTS
T ss_pred             CCCCCCCcCccccc--------chhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            99999865332100        000000000000001 00011235678899999999999999999999864

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=100.00  E-value=1.7e-38  Score=339.19  Aligned_cols=262  Identities=23%  Similarity=0.278  Sum_probs=202.9

Q ss_pred             hhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC--chhhHHHHHHHHHHHhhcCCCceeeeeeeeccccee---
Q 048419          328 VTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDEL---  402 (653)
Q Consensus       328 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~---  402 (653)
                      ..++|...+.||+|+||.||+|.+..+|+.||||++...  .....+.+.+|+.++++++||||+++++++...+..   
T Consensus        40 l~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~  119 (371)
T 4exu_A           40 LPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF  119 (371)
T ss_dssp             EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTC
T ss_pred             ccccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccc
Confidence            346788899999999999999999999999999999654  334467889999999999999999999999877654   


Q ss_pred             ---EEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEee
Q 048419          403 ---LLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDF  479 (653)
Q Consensus       403 ---~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df  479 (653)
                         ++||||+. ++|.+++.       ..+++.+++.++.||+.||.|||+   ++|+||||||+|||++.++.+||+||
T Consensus       120 ~~~~lv~e~~~-~~l~~~~~-------~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kL~Df  188 (371)
T 4exu_A          120 YDFYLVMPFMQ-TDLQKIMG-------MEFSEEKIQYLVYQMLKGLKYIHS---AGVVHRDLKPGNLAVNEDCELKILDF  188 (371)
T ss_dssp             CCCEEEEECCC-EEHHHHTT-------SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECST
T ss_pred             eeEEEEEcccc-ccHHHHhh-------cCCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCcCHHHeEECCCCCEEEEec
Confidence               99999997 58887773       238899999999999999999999   89999999999999999999999999


Q ss_pred             cCcccccCCCCCcccccccCCcccCcccccc-CCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcc-
Q 048419          480 GLAKIYEHGANPQTTHIVGTLGYLAPELTRT-GKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLE-  557 (653)
Q Consensus       480 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~-  557 (653)
                      |+++.....    .....||+.|+|||.+.+ ..++.++|||||||++|||++|+.||......+...  ..+...... 
T Consensus       189 g~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~--~i~~~~~~~~  262 (371)
T 4exu_A          189 GLARHADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLT--QILKVTGVPG  262 (371)
T ss_dssp             TCC------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH--HHHHHHCCCC
T ss_pred             CcccccccC----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHH--HHHHHhCCCc
Confidence            999865432    234578999999999877 678999999999999999999999998655432211  111100000 


Q ss_pred             ---------cchhHhhhhcc--CcCC-----HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          558 ---------GEITQAIDQTL--DYYD-----LAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       558 ---------~~~~~~~d~~l--~~~~-----~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                               ...........  ....     ......+.+|+.+||+.||.+|||+.|++++-..
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f  327 (371)
T 4exu_A          263 TEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFF  327 (371)
T ss_dssp             HHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGG
T ss_pred             HHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcCccc
Confidence                     00000010000  0001     1124678999999999999999999999987654

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=100.00  E-value=9.2e-39  Score=334.45  Aligned_cols=267  Identities=26%  Similarity=0.369  Sum_probs=204.5

Q ss_pred             HhhcCcCcceeeeeeCcEEEEEEEeC-CCCcEEEEEEeccCc--hhhHHHHHHHHHHHhhc---CCCceeeeeeeec---
Q 048419          327 SVTKGFGEQNLVGSGGFGRVYRGLMP-SLGLEVAIKRIGHNS--QQGMKEFVAEIMSMGRL---RHRNLVQLHGWCR---  397 (653)
Q Consensus       327 ~at~~f~~~~~LG~G~fg~Vy~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l---~H~niv~l~g~~~---  397 (653)
                      .+.++|...+.||+|+||.||+|.+. .+++.||||++....  ......+.+|+.+++++   +||||++++++|.   
T Consensus         8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~   87 (326)
T 1blx_A            8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR   87 (326)
T ss_dssp             CGGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEE
T ss_pred             CchhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecc
Confidence            45688999999999999999999985 668999999986432  11223456677766666   8999999999987   


Q ss_pred             --ccceeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEE
Q 048419          398 --KQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAK  475 (653)
Q Consensus       398 --~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~k  475 (653)
                        .....++||||++ |+|.+++....   ...+++.+++.++.||+.||.|||+   ++|+||||||+||+++.++.+|
T Consensus        88 ~~~~~~~~lv~e~~~-~~L~~~l~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~gi~H~dlkp~Nili~~~~~~k  160 (326)
T 1blx_A           88 TDRETKLTLVFEHVD-QDLTTYLDKVP---EPGVPTETIKDMMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIK  160 (326)
T ss_dssp             CSSEEEEEEEEECCS-CBHHHHHHHSC---TTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEE
T ss_pred             cCCCceEEEEEecCC-CCHHHHHHhcc---cCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCCHHHeEEcCCCCEE
Confidence              5667899999997 69999997654   2458999999999999999999999   8999999999999999999999


Q ss_pred             EEeecCcccccCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhh
Q 048419          476 LGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELH  555 (653)
Q Consensus       476 l~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~  555 (653)
                      |+|||+++.....  .......||..|+|||.+.+..++.++|||||||++|||++|+.||.........  ...+....
T Consensus       161 l~Dfg~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~--~~i~~~~~  236 (326)
T 1blx_A          161 LADFGLARIYSFQ--MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQL--GKILDVIG  236 (326)
T ss_dssp             ECSCCSCCCCCGG--GGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH--HHHHHHHC
T ss_pred             EecCcccccccCC--CCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHH--HHHHHHcC
Confidence            9999999865432  1233457899999999999889999999999999999999999999865543221  11111110


Q ss_pred             cc--cchhHh-------h----hhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          556 LE--GEITQA-------I----DQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       556 ~~--~~~~~~-------~----d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                      ..  ......       .    ...+..........+.+|+.+||+.||.+||++.|++++-
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp  298 (326)
T 1blx_A          237 LPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHP  298 (326)
T ss_dssp             CCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSG
T ss_pred             CCCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcCc
Confidence            00  000000       0    0000111122346788999999999999999999999754

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=100.00  E-value=4e-38  Score=333.94  Aligned_cols=261  Identities=22%  Similarity=0.271  Sum_probs=202.3

Q ss_pred             hcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC--chhhHHHHHHHHHHHhhcCCCceeeeeeeecccce-----
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDE-----  401 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~-----  401 (653)
                      .++|...+.||+|+||.||+|.+..+|+.||||++...  .....+.+.+|+.++++++||||+++++++...+.     
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~  102 (353)
T 3coi_A           23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY  102 (353)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred             CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence            46788899999999999999999989999999999654  33445788999999999999999999999977654     


Q ss_pred             -eEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeec
Q 048419          402 -LLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFG  480 (653)
Q Consensus       402 -~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG  480 (653)
                       .++||||++ ++|.+++..       .+++.+++.++.||+.||.|||+   ++|+||||||+||+++.++.+||+|||
T Consensus       103 ~~~lv~e~~~-~~l~~~~~~-------~~~~~~~~~i~~qi~~al~~LH~---~~ivH~dlkp~NIl~~~~~~~kl~Dfg  171 (353)
T 3coi_A          103 DFYLVMPFMQ-TDLQKIMGL-------KFSEEKIQYLVYQMLKGLKYIHS---AGVVHRDLKPGNLAVNEDCELKILDFG  171 (353)
T ss_dssp             CCEEEEECCS-EEGGGTTTS-------CCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECTTCCEEECSTT
T ss_pred             eEEEEecccc-CCHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEeECCCCcEEEeecc
Confidence             499999997 588887732       38899999999999999999999   899999999999999999999999999


Q ss_pred             CcccccCCCCCcccccccCCcccCcccccc-CCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcc--
Q 048419          481 LAKIYEHGANPQTTHIVGTLGYLAPELTRT-GKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLE--  557 (653)
Q Consensus       481 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~--  557 (653)
                      +++.....    .....||+.|+|||.+.+ ..++.++|||||||++|||++|+.||......+...  .........  
T Consensus       172 ~~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~--~i~~~~~~~~~  245 (353)
T 3coi_A          172 LARHADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLT--QILKVTGVPGT  245 (353)
T ss_dssp             CTTC------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHH--HHHHHHCBCCH
T ss_pred             cccCCCCC----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH--HHHHHhCCCCH
Confidence            99865322    234578999999999876 678999999999999999999999998655432211  111110000  


Q ss_pred             --------cchhHhhhh-------ccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          558 --------GEITQAIDQ-------TLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       558 --------~~~~~~~d~-------~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                              ......+..       .+..........+.+++.+||+.||.+|||+.|++++-..
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f  309 (353)
T 3coi_A          246 EFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFF  309 (353)
T ss_dssp             HHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGG
T ss_pred             HHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcCcch
Confidence                    000000000       0011112335778999999999999999999999987543

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=100.00  E-value=5.2e-38  Score=335.08  Aligned_cols=265  Identities=18%  Similarity=0.261  Sum_probs=205.2

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcC-----------CCceeeeeeeecc
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLR-----------HRNLVQLHGWCRK  398 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----------H~niv~l~g~~~~  398 (653)
                      ++|...+.||+|+||.||+|.+..+++.||||++... ....+.+.+|+.++++++           |+||+++++++..
T Consensus        19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~   97 (373)
T 1q8y_A           19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNH   97 (373)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEE
T ss_pred             CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhc
Confidence            5788999999999999999999888999999999643 334567889999999886           8999999999876


Q ss_pred             cc----eeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCC-CeEecCCCCCcEEEc----
Q 048419          399 QD----ELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQ-RVVHRDVKPSNILLD----  469 (653)
Q Consensus       399 ~~----~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~-~ivH~Dlkp~NIll~----  469 (653)
                      .+    .+++||||+ +++|.+++....   ...+++..++.++.||+.||+|||+   + +|+||||||+|||++    
T Consensus        98 ~~~~~~~~~lv~e~~-~~~L~~~~~~~~---~~~~~~~~~~~i~~qi~~aL~~lH~---~~~ivH~Dikp~NIll~~~~~  170 (373)
T 1q8y_A           98 KGPNGVHVVMVFEVL-GENLLALIKKYE---HRGIPLIYVKQISKQLLLGLDYMHR---RCGIIHTDIKPENVLMEIVDS  170 (373)
T ss_dssp             EETTEEEEEEEECCC-CEEHHHHHHHTT---TSCCCHHHHHHHHHHHHHHHHHHHH---TTCEECSCCSGGGEEEEEEET
T ss_pred             cCCCCceEEEEEecC-CCCHHHHHHHhh---ccCCcHHHHHHHHHHHHHHHHHHHh---cCCEEecCCChHHeEEeccCC
Confidence            54    789999999 889999997643   2458899999999999999999999   7 999999999999994    


Q ss_pred             --CCCcEEEEeecCcccccCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhh----
Q 048419          470 --TYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAA----  543 (653)
Q Consensus       470 --~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~----  543 (653)
                        ..+.+||+|||+++.....    .....||+.|+|||++.+..++.++|||||||++|||++|+.||.......    
T Consensus       171 ~~~~~~~kl~Dfg~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~  246 (373)
T 1q8y_A          171 PENLIQIKIADLGNACWYDEH----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKD  246 (373)
T ss_dssp             TTTEEEEEECCCTTCEETTBC----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CH
T ss_pred             CcCcceEEEcccccccccCCC----CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCCh
Confidence              4457999999999876432    233478999999999999899999999999999999999999998543211    


Q ss_pred             HHHHHHHHHhhhcc-------cc----------------------hhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCC
Q 048419          544 ELLLVDWVKELHLE-------GE----------------------ITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYR  594 (653)
Q Consensus       544 ~~~l~~~~~~~~~~-------~~----------------------~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~R  594 (653)
                      ...+...+......       +.                      +.+.+.. ...........+.+|+.+||+.||.+|
T Consensus       247 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~L~~dP~~R  325 (373)
T 1q8y_A          247 DDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTE-KYKFSKDEAKEISDFLSPMLQLDPRKR  325 (373)
T ss_dssp             HHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHH-TTCCCHHHHHHHHHHHGGGGCSSTTTC
T ss_pred             HHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhh-cccCCcchHHHHHHHHHHHhccCcccc
Confidence            11111111110000       00                      0000000 012345677889999999999999999


Q ss_pred             CCHHHHHHHHcCC
Q 048419          595 PDMRRVVEFLLGD  607 (653)
Q Consensus       595 Ps~~evl~~L~~~  607 (653)
                      ||+.|++++-.-.
T Consensus       326 pt~~ell~hp~f~  338 (373)
T 1q8y_A          326 ADAGGLVNHPWLK  338 (373)
T ss_dssp             BCHHHHHTCGGGT
T ss_pred             CCHHHHhhChhhh
Confidence            9999999966543

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=100.00  E-value=7.3e-39  Score=338.51  Aligned_cols=263  Identities=19%  Similarity=0.257  Sum_probs=206.2

Q ss_pred             hcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchh-----------------hHHHHHHHHHHHhhcCCCceee
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQ-----------------GMKEFVAEIMSMGRLRHRNLVQ  391 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~-----------------~~~~~~~E~~~l~~l~H~niv~  391 (653)
                      .++|...+.||+|+||.||+|..  +++.||||++......                 ..+.+.+|+.++++++||||++
T Consensus        30 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~  107 (348)
T 2pml_X           30 INDYRIIRTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLT  107 (348)
T ss_dssp             ETTEEEEEEEECCSSCCEEEEEE--TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCC
T ss_pred             cCceEEEEEEcCCCCeEEEEEEc--CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcce
Confidence            46899999999999999999999  6899999998643211                 1278999999999999999999


Q ss_pred             eeeeecccceeEEEEeccCCCCchhh------hhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCc
Q 048419          392 LHGWCRKQDELLLVYDYVPNGSLDKL------LFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSN  465 (653)
Q Consensus       392 l~g~~~~~~~~~lV~E~~~~gsL~~~------l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~N  465 (653)
                      +++++.+.+..++||||+++++|.++      +....   ...+++..++.++.||+.||.|||+  .++|+||||||+|
T Consensus       108 ~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~--~~~i~H~dl~p~N  182 (348)
T 2pml_X          108 CEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNY---TCFIPIQVIKCIIKSVLNSFSYIHN--EKNICHRDVKPSN  182 (348)
T ss_dssp             CSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSS---CCCCCHHHHHHHHHHHHHHHHHHHH--TSCEECCCCCGGG
T ss_pred             EEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhcc---ccCCCHHHHHHHHHHHHHHHHHHhc--cCCEeecCCChHh
Confidence            99999999999999999999999999      54422   3568999999999999999999997  2699999999999


Q ss_pred             EEEcCCCcEEEEeecCcccccCCCCCcccccccCCcccCccccccC-CCCC-ccceeehHHHHHHHHhCCCCCChhhhhh
Q 048419          466 ILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTG-KATT-STDVYSYGILMLEVACGRRSIEPQKAAA  543 (653)
Q Consensus       466 Ill~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~-ksDV~s~Gvvl~elltG~~p~~~~~~~~  543 (653)
                      |+++.++.+||+|||++......   ......|+..|+|||.+.+. .++. ++|||||||++|||++|+.||.......
T Consensus       183 il~~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~  259 (348)
T 2pml_X          183 ILMDKNGRVKLSDFGESEYMVDK---KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLV  259 (348)
T ss_dssp             EEECTTSCEEECCCTTCEECBTT---EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSH
T ss_pred             EEEcCCCcEEEeccccccccccc---cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHH
Confidence            99999999999999999876432   33445789999999999877 5666 9999999999999999999998654311


Q ss_pred             HHHHHHHHHhhhcccchhH----hhhhcc----CcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          544 ELLLVDWVKELHLEGEITQ----AIDQTL----DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       544 ~~~l~~~~~~~~~~~~~~~----~~d~~l----~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                      .  +...+....  .....    ...+..    ..........+.+++.+||+.||.+||++.|++++-.
T Consensus       260 ~--~~~~i~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~hp~  325 (348)
T 2pml_X          260 E--LFNNIRTKN--IEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEW  325 (348)
T ss_dssp             H--HHHHHTSCC--CCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGG
T ss_pred             H--HHHHHhccC--cCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcCcc
Confidence            1  111111110  00000    000000    0000223467899999999999999999999998653

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=100.00  E-value=4.8e-38  Score=332.54  Aligned_cols=266  Identities=20%  Similarity=0.285  Sum_probs=206.7

Q ss_pred             hhcCcCcceeeeeeCcEEEEEEEeCCCC-cEEEEEEeccCchhhHHHHHHHHHHHhhcCCCc------eeeeeeeecccc
Q 048419          328 VTKGFGEQNLVGSGGFGRVYRGLMPSLG-LEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRN------LVQLHGWCRKQD  400 (653)
Q Consensus       328 at~~f~~~~~LG~G~fg~Vy~~~~~~~~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n------iv~l~g~~~~~~  400 (653)
                      ..++|...+.||+|+||.||+|.+..++ ..||||++... ....+.+.+|+.++++++|++      ++.+++++...+
T Consensus        17 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~   95 (355)
T 2eu9_A           17 LQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHG   95 (355)
T ss_dssp             ETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETT
T ss_pred             ecccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCC
Confidence            3578999999999999999999987666 78999999643 344567889999999998766      899999999999


Q ss_pred             eeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEE------------
Q 048419          401 ELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILL------------  468 (653)
Q Consensus       401 ~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll------------  468 (653)
                      ..++||||+ +++|.+++....   ...+++.+++.++.||+.||.|||+   ++|+||||||+|||+            
T Consensus        96 ~~~lv~e~~-~~~l~~~l~~~~---~~~~~~~~~~~i~~qi~~~L~~lH~---~~ivH~Dlkp~NIll~~~~~~~~~~~~  168 (355)
T 2eu9_A           96 HMCIAFELL-GKNTFEFLKENN---FQPYPLPHVRHMAYQLCHALRFLHE---NQLTHTDLKPENILFVNSEFETLYNEH  168 (355)
T ss_dssp             EEEEEEECC-CCBHHHHHHHTT---TCCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEESCCCEEEEECCC
T ss_pred             eEEEEEecc-CCChHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEeccccccccccc
Confidence            999999999 667777776543   2458999999999999999999999   899999999999999            


Q ss_pred             -------cCCCcEEEEeecCcccccCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhh
Q 048419          469 -------DTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKA  541 (653)
Q Consensus       469 -------~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~  541 (653)
                             +.++.+||+|||+++.....    .....||+.|+|||.+.+..++.++|||||||++|||++|+.||.....
T Consensus       169 ~~~~~~~~~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~  244 (355)
T 2eu9_A          169 KSCEEKSVKNTSIRVADFGSATFDHEH----HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHEN  244 (355)
T ss_dssp             -CCCEEEESCCCEEECCCTTCEETTSC----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred             ccccccccCCCcEEEeecCcccccccc----ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCH
Confidence                   67889999999999864332    2345789999999999999999999999999999999999999987554


Q ss_pred             hhHHHHHHHHHhhhcccchh----------------------Hhhhh---cc---CcCCHHHHHHHHHHHHHcCCCCCCC
Q 048419          542 AAELLLVDWVKELHLEGEIT----------------------QAIDQ---TL---DYYDLAEAELVLNLGLFCSAPNPVY  593 (653)
Q Consensus       542 ~~~~~l~~~~~~~~~~~~~~----------------------~~~d~---~l---~~~~~~~~~~l~~l~~~Cl~~dP~~  593 (653)
                      ....................                      ..+..   .+   ......+...+.+|+.+||+.||.+
T Consensus       245 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~  324 (355)
T 2eu9_A          245 REHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQ  324 (355)
T ss_dssp             HHHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTT
T ss_pred             HHHHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhh
Confidence            33222111111000000000                      00000   00   1122344568999999999999999


Q ss_pred             CCCHHHHHHHHc
Q 048419          594 RPDMRRVVEFLL  605 (653)
Q Consensus       594 RPs~~evl~~L~  605 (653)
                      |||+.|++++-.
T Consensus       325 Rpt~~e~l~hp~  336 (355)
T 2eu9_A          325 RITLAEALLHPF  336 (355)
T ss_dssp             SCCHHHHTTSGG
T ss_pred             CcCHHHHhcChh
Confidence            999999997653

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=100.00  E-value=2e-38  Score=326.09  Aligned_cols=256  Identities=21%  Similarity=0.345  Sum_probs=206.4

Q ss_pred             HHhhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC--chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeE
Q 048419          326 ASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELL  403 (653)
Q Consensus       326 ~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~  403 (653)
                      ....++|...+.||+|+||.||+|....+++.||||++...  .....+.+.+|++++++++||||+++++++.+.+..+
T Consensus        18 ~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   97 (287)
T 2wei_A           18 GTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFY   97 (287)
T ss_dssp             HHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred             HHHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEE
Confidence            34557899999999999999999999888999999998653  2345678999999999999999999999999999999


Q ss_pred             EEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCC---CcEEEEeec
Q 048419          404 LVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTY---LNAKLGDFG  480 (653)
Q Consensus       404 lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~---~~~kl~DfG  480 (653)
                      +|+||+++++|.+++...     ..+++.+++.++.||+.||.|||+   ++++|+||||+||+++.+   +.+||+|||
T Consensus        98 lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg  169 (287)
T 2wei_A           98 IVGELYTGGELFDEIIKR-----KRFSEHDAARIIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFG  169 (287)
T ss_dssp             EEECCCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSSTTCCEEECSTT
T ss_pred             EEEEccCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCChhhEEEecCCCcccEEEeccC
Confidence            999999999999988653     348999999999999999999999   899999999999999654   469999999


Q ss_pred             CcccccCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccch
Q 048419          481 LAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEI  560 (653)
Q Consensus       481 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~  560 (653)
                      ++.......  ......|++.|+|||.+.+ .++.++||||||+++|||++|+.||.......   +...+.........
T Consensus       170 ~~~~~~~~~--~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~---~~~~~~~~~~~~~~  243 (287)
T 2wei_A          170 LSTCFQQNT--KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYD---ILKRVETGKYAFDL  243 (287)
T ss_dssp             GGGTBCCCS--SCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHHHHHHCCCCCCS
T ss_pred             cceeecCCC--ccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHH---HHHHHHcCCCCCCc
Confidence            998664332  2233468899999999875 58999999999999999999999998654322   11111111000000


Q ss_pred             hHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          561 TQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       561 ~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                           +...    .....+.+++.+||+.||.+|||+.|++++-
T Consensus       244 -----~~~~----~~~~~~~~li~~~l~~dp~~Rps~~ell~hp  278 (287)
T 2wei_A          244 -----PQWR----TISDDAKDLIRKMLTFHPSLRITATQCLEHP  278 (287)
T ss_dssp             -----GGGT----TSCHHHHHHHHHHTCSSGGGSCCHHHHHHSH
T ss_pred             -----hhhh----hcCHHHHHHHHHHcccChhhCcCHHHHhcCH
Confidence                 0001    1235688999999999999999999999843

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=100.00  E-value=6.8e-39  Score=335.97  Aligned_cols=257  Identities=24%  Similarity=0.356  Sum_probs=182.5

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc-hhhHHHHHHHHH-HHhhcCCCceeeeeeeecccceeEEEEe
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS-QQGMKEFVAEIM-SMGRLRHRNLVQLHGWCRKQDELLLVYD  407 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~-~l~~l~H~niv~l~g~~~~~~~~~lV~E  407 (653)
                      ++|...+.||+|+||.||+|.+..+++.||||++.... ......+..|+. +++.++||||+++++++.+.+..++|||
T Consensus        22 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e  101 (327)
T 3aln_A           22 EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICME  101 (327)
T ss_dssp             CSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             HHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEe
Confidence            67888999999999999999999889999999997643 334455666665 7778899999999999999999999999


Q ss_pred             ccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCC-CeEecCCCCCcEEEcCCCcEEEEeecCccccc
Q 048419          408 YVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQ-RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE  486 (653)
Q Consensus       408 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~-~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~  486 (653)
                      |+++ +|.+++..........+++..++.++.|++.||.|||+   + +|+||||||+|||++.++.+||+|||+++...
T Consensus       102 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~  177 (327)
T 3aln_A          102 LMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKE---NLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLV  177 (327)
T ss_dssp             CCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHH---HHSCCCSCCCGGGEEEETTTEEEECCCSSSCC--
T ss_pred             ecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhc---cCCEeECCCCHHHEEEcCCCCEEEccCCCceecc
Confidence            9975 88887764322224568999999999999999999999   7 99999999999999999999999999998664


Q ss_pred             CCCCCcccccccCCcccCcccc----ccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhH
Q 048419          487 HGANPQTTHIVGTLGYLAPELT----RTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQ  562 (653)
Q Consensus       487 ~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~  562 (653)
                      ...  ......||+.|+|||.+    .+..++.++|||||||++|||++|+.||........     .... ...+..  
T Consensus       178 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-----~~~~-~~~~~~--  247 (327)
T 3aln_A          178 DSI--AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFD-----QLTQ-VVKGDP--  247 (327)
T ss_dssp             ------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC------------CC-CCCSCC--
T ss_pred             ccc--ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHH-----HHHH-HhcCCC--
Confidence            322  22334689999999998    456789999999999999999999999975432110     0000 001100  


Q ss_pred             hhhhcc-CcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 048419          563 AIDQTL-DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEF  603 (653)
Q Consensus       563 ~~d~~l-~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  603 (653)
                         +.+ ..........+.+++.+||+.||.+||++.|++++
T Consensus       248 ---~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h  286 (327)
T 3aln_A          248 ---PQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKH  286 (327)
T ss_dssp             ---CCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred             ---CCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhC
Confidence               111 11111234678899999999999999999999874

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=100.00  E-value=8.4e-39  Score=345.68  Aligned_cols=271  Identities=20%  Similarity=0.255  Sum_probs=186.9

Q ss_pred             CcCc-ceeeeeeCcEEEEEEEeC--CCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeec--ccceeEEE
Q 048419          331 GFGE-QNLVGSGGFGRVYRGLMP--SLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCR--KQDELLLV  405 (653)
Q Consensus       331 ~f~~-~~~LG~G~fg~Vy~~~~~--~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~--~~~~~~lV  405 (653)
                      .|.. .++||+|+||.||+|.+.  .+++.||||++.....  .+.+.+|+.++++++||||+++++++.  .....++|
T Consensus        21 ~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv   98 (405)
T 3rgf_A           21 LFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI--SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLL   98 (405)
T ss_dssp             HEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC--CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEE
T ss_pred             hhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC--CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEE
Confidence            3544 458999999999999965  4578999999965432  346789999999999999999999994  46789999


Q ss_pred             EeccCCCCchhhhhccccc----ccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEE----cCCCcEEEE
Q 048419          406 YDYVPNGSLDKLLFDKDHK----LRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILL----DTYLNAKLG  477 (653)
Q Consensus       406 ~E~~~~gsL~~~l~~~~~~----~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll----~~~~~~kl~  477 (653)
                      |||++ ++|.+++......    ....+++..++.++.||+.||.|||+   ++|+||||||+||||    +.++.+||+
T Consensus        99 ~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~kl~  174 (405)
T 3rgf_A           99 FDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHA---NWVLHRDLKPANILVMGEGPERGRVKIA  174 (405)
T ss_dssp             EECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECCSSTTTTCEEEC
T ss_pred             EeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHh---CCEeCCCcCHHHeEEecCCCCCCcEEEE
Confidence            99996 5888877643211    12248999999999999999999999   899999999999999    778999999


Q ss_pred             eecCcccccCCCC--CcccccccCCcccCccccccC-CCCCccceeehHHHHHHHHhCCCCCChhhhhh-------HHHH
Q 048419          478 DFGLAKIYEHGAN--PQTTHIVGTLGYLAPELTRTG-KATTSTDVYSYGILMLEVACGRRSIEPQKAAA-------ELLL  547 (653)
Q Consensus       478 DfGla~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~-~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~-------~~~l  547 (653)
                      |||+++.......  .......||+.|+|||++.+. .++.++|||||||++|||++|+.||.......       ...+
T Consensus       175 Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l  254 (405)
T 3rgf_A          175 DMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQL  254 (405)
T ss_dssp             CTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHH
T ss_pred             ECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHH
Confidence            9999987654221  223346789999999998774 58999999999999999999999997543210       0111


Q ss_pred             HHHHHhhhcc--cchh---------Hhhhhcc----CcCCH---------HHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 048419          548 VDWVKELHLE--GEIT---------QAIDQTL----DYYDL---------AEAELVLNLGLFCSAPNPVYRPDMRRVVEF  603 (653)
Q Consensus       548 ~~~~~~~~~~--~~~~---------~~~d~~l----~~~~~---------~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  603 (653)
                      ...+......  ....         .......    .....         .....+.+|+.+||+.||.+|||+.|++++
T Consensus       255 ~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~h  334 (405)
T 3rgf_A          255 DRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQD  334 (405)
T ss_dssp             HHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             HHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence            1111111000  0000         0000000    00000         013567899999999999999999999998


Q ss_pred             HcCC
Q 048419          604 LLGD  607 (653)
Q Consensus       604 L~~~  607 (653)
                      -...
T Consensus       335 p~f~  338 (405)
T 3rgf_A          335 PYFL  338 (405)
T ss_dssp             GGGT
T ss_pred             hhhc
Confidence            7643

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=100.00  E-value=1.6e-38  Score=362.98  Aligned_cols=256  Identities=23%  Similarity=0.348  Sum_probs=203.9

Q ss_pred             hhcCcCcceeeeeeCcEEEEEEEeCCC---CcEEEEEEeccC-chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeE
Q 048419          328 VTKGFGEQNLVGSGGFGRVYRGLMPSL---GLEVAIKRIGHN-SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELL  403 (653)
Q Consensus       328 at~~f~~~~~LG~G~fg~Vy~~~~~~~---~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~  403 (653)
                      ..++|...+.||+|+||.||+|.+...   +..||||++... .....+.+.+|+.++++++||||+++++++.+ +..+
T Consensus       388 ~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~-~~~~  466 (656)
T 2j0j_A          388 QRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVW  466 (656)
T ss_dssp             CGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCE
T ss_pred             ccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec-CceE
Confidence            346688889999999999999998543   567999998654 34445789999999999999999999999854 5689


Q ss_pred             EEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcc
Q 048419          404 LVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK  483 (653)
Q Consensus       404 lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~  483 (653)
                      +||||+++|+|.+++....    ..+++..++.++.|+++||.|||+   ++|+||||||+|||++.++.+||+|||+++
T Consensus       467 lv~E~~~~g~L~~~l~~~~----~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDikp~NILl~~~~~vkL~DFG~a~  539 (656)
T 2j0j_A          467 IIMELCTLGELRSFLQVRK----FSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSR  539 (656)
T ss_dssp             EEEECCTTCBHHHHHHHTT----TTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCCCCCC
T ss_pred             EEEEcCCCCcHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHh---CCccccccchHhEEEeCCCCEEEEecCCCe
Confidence            9999999999999997542    348899999999999999999999   899999999999999999999999999998


Q ss_pred             cccCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhhcccchhH
Q 048419          484 IYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELHLEGEITQ  562 (653)
Q Consensus       484 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~  562 (653)
                      ..............+|+.|+|||.+.+..++.++|||||||++|||++ |..||......+   ....+....       
T Consensus       540 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~---~~~~i~~~~-------  609 (656)
T 2j0j_A          540 YMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND---VIGRIENGE-------  609 (656)
T ss_dssp             SCCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH---HHHHHHHTC-------
T ss_pred             ecCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHH---HHHHHHcCC-------
Confidence            765443333334567889999999998899999999999999999997 999997654322   111111100       


Q ss_pred             hhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          563 AIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       563 ~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                           ....+......+.+++.+||+.||.+||++.||++.|+.
T Consensus       610 -----~~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~  648 (656)
T 2j0j_A          610 -----RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLST  648 (656)
T ss_dssp             -----CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             -----CCCCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence                 001112234678899999999999999999999998864

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=100.00  E-value=3.3e-38  Score=339.69  Aligned_cols=262  Identities=25%  Similarity=0.327  Sum_probs=194.8

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccc------eeE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQD------ELL  403 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~------~~~  403 (653)
                      .+|...++||+|+||.||+|++..++. +|+|++......    ..+|++++++++||||+++++++...+      .++
T Consensus        40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~-~aikk~~~~~~~----~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~  114 (394)
T 4e7w_A           40 IAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKRF----KNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLN  114 (394)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTEE-EEEEEEECCTTS----CCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEE
T ss_pred             ceEEEeEEEeeCCCeEEEEEEECCCCe-EEEEEEecCcch----HHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEE
Confidence            468889999999999999999976554 899888543221    236999999999999999999985543      378


Q ss_pred             EEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEc-CCCcEEEEeecCc
Q 048419          404 LVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLD-TYLNAKLGDFGLA  482 (653)
Q Consensus       404 lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~-~~~~~kl~DfGla  482 (653)
                      +||||++++.+........  ....+++..++.++.||++||+|||+   ++|+||||||+|||++ .++.+||+|||++
T Consensus       115 lv~e~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~~kL~DFG~a  189 (394)
T 4e7w_A          115 LVLEYVPETVYRASRHYAK--LKQTMPMLLIKLYMYQLLRSLAYIHS---IGICHRDIKPQNLLLDPPSGVLKLIDFGSA  189 (394)
T ss_dssp             EEEECCSEEHHHHHHHHHH--TTSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEETTTTEEEECCCTTC
T ss_pred             EEeeccCccHHHHHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCCHHHEEEcCCCCcEEEeeCCCc
Confidence            9999998744433322111  13468999999999999999999999   8999999999999998 7999999999999


Q ss_pred             ccccCCCCCcccccccCCcccCccccccC-CCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcc--cc
Q 048419          483 KIYEHGANPQTTHIVGTLGYLAPELTRTG-KATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLE--GE  559 (653)
Q Consensus       483 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~--~~  559 (653)
                      +......  ......||+.|+|||.+.+. .++.++|||||||++|||++|+.||......+..  ...+......  ..
T Consensus       190 ~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l--~~i~~~~g~p~~~~  265 (394)
T 4e7w_A          190 KILIAGE--PNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQL--VEIIKVLGTPSREQ  265 (394)
T ss_dssp             EECCTTC--CCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH--HHHHHHHCCCCHHH
T ss_pred             ccccCCC--CCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH--HHHHHHhCCCCHHH
Confidence            8764432  22345789999999998664 5899999999999999999999999876543322  1222111000  00


Q ss_pred             hhHh----hhhcc---Cc------CCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          560 ITQA----IDQTL---DY------YDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       560 ~~~~----~d~~l---~~------~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                      +...    .....   ..      +.......+.+|+.+||+.||.+|||+.|++++-.
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~  324 (394)
T 4e7w_A          266 IKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPF  324 (394)
T ss_dssp             HHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGG
T ss_pred             HHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChh
Confidence            0000    00000   00      11123467899999999999999999999998753

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=100.00  E-value=3.3e-38  Score=332.35  Aligned_cols=257  Identities=21%  Similarity=0.239  Sum_probs=177.0

Q ss_pred             hhcCcCcc-eeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecc----ccee
Q 048419          328 VTKGFGEQ-NLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRK----QDEL  402 (653)
Q Consensus       328 at~~f~~~-~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~----~~~~  402 (653)
                      ..++|... ++||+|+||.||+|.+..+++.||||++.....    ........++.++|+||+++++++..    ....
T Consensus        26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~  101 (336)
T 3fhr_A           26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPK----ARQEVDHHWQASGGPHIVCILDVYENMHHGKRCL  101 (336)
T ss_dssp             GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSHH----HHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred             ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcHH----HHHHHHHHHHhcCCCChHHHHHHHhhccCCCceE
Confidence            45678885 469999999999999998999999999854321    11222334566799999999999876    4568


Q ss_pred             EEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcC---CCcEEEEee
Q 048419          403 LLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDT---YLNAKLGDF  479 (653)
Q Consensus       403 ~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~Df  479 (653)
                      ++||||+++|+|.+++....   ...+++.+++.++.||+.||.|||+   ++|+||||||+|||++.   ++.+||+||
T Consensus       102 ~lv~e~~~gg~L~~~l~~~~---~~~l~~~~~~~i~~ql~~~l~~LH~---~~ivH~dlkp~NIll~~~~~~~~~kl~Df  175 (336)
T 3fhr_A          102 LIIMECMEGGELFSRIQERG---DQAFTEREAAEIMRDIGTAIQFLHS---HNIAHRDVKPENLLYTSKEKDAVLKLTDF  175 (336)
T ss_dssp             EEEEECCTTEEHHHHHHTC----CCCCBHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSTTCCEEECCC
T ss_pred             EEEEeccCCCCHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEEecCCCceEEEecc
Confidence            99999999999999998654   3468999999999999999999999   89999999999999976   455999999


Q ss_pred             cCcccccCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccc
Q 048419          480 GLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGE  559 (653)
Q Consensus       480 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~  559 (653)
                      |+++.....   ......||+.|+|||.+.+..++.++|||||||++|||++|+.||..........   ........+.
T Consensus       176 g~~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~---~~~~~~~~~~  249 (336)
T 3fhr_A          176 GFAKETTQN---ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISP---GMKRRIRLGQ  249 (336)
T ss_dssp             TTCEEC-------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC-----------------------
T ss_pred             ccceecccc---ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhh---hHHHhhhccc
Confidence            999865432   2234578999999999988889999999999999999999999997544321100   0000000000


Q ss_pred             hhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          560 ITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       560 ~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                      . ...    ..........+.+|+.+||+.||.+|||+.|++++-.
T Consensus       250 ~-~~~----~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~  290 (336)
T 3fhr_A          250 Y-GFP----NPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPW  290 (336)
T ss_dssp             --CCC----TTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSHH
T ss_pred             c-ccC----chhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcCcc
Confidence            0 000    0000123467889999999999999999999998553

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=100.00  E-value=1.7e-38  Score=330.60  Aligned_cols=250  Identities=26%  Similarity=0.372  Sum_probs=196.8

Q ss_pred             HHHhhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCch------hhHHHHHHHHHHHhhc----CCCceeeeee
Q 048419          325 LASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQ------QGMKEFVAEIMSMGRL----RHRNLVQLHG  394 (653)
Q Consensus       325 l~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l----~H~niv~l~g  394 (653)
                      .....++|...+.||+|+||.||+|.+..+++.||||++.....      .....+.+|+.++.++    +|+||+++++
T Consensus        26 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~  105 (312)
T 2iwi_A           26 REAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLD  105 (312)
T ss_dssp             -------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEE
T ss_pred             hhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEE
Confidence            34556789999999999999999999988899999999965432      1233456799999998    8999999999


Q ss_pred             eecccceeEEEEec-cCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEc-CCC
Q 048419          395 WCRKQDELLLVYDY-VPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLD-TYL  472 (653)
Q Consensus       395 ~~~~~~~~~lV~E~-~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~-~~~  472 (653)
                      ++...+..++|+|+ +++++|.+++...     ..+++.+++.++.||++||.|||+   ++|+||||||+||+++ .++
T Consensus       106 ~~~~~~~~~~v~e~~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~  177 (312)
T 2iwi_A          106 WFETQEGFMLVLERPLPAQDLFDYITEK-----GPLGEGPSRCFFGQVVAAIQHCHS---RGVVHRDIKDENILIDLRRG  177 (312)
T ss_dssp             EC-----CEEEEECCSSEEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHH---HTEECCCCSGGGEEEETTTT
T ss_pred             EEecCCeEEEEEEecCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCChhhEEEeCCCC
Confidence            99999999999999 7899999999763     348999999999999999999999   8999999999999999 889


Q ss_pred             cEEEEeecCcccccCCCCCcccccccCCcccCccccccCCCC-CccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHH
Q 048419          473 NAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKAT-TSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWV  551 (653)
Q Consensus       473 ~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~  551 (653)
                      .+||+|||+++.....   ......|+..|+|||++.+..+. .++|||||||++|||++|+.||......        .
T Consensus       178 ~~kl~dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--------~  246 (312)
T 2iwi_A          178 CAKLIDFGSGALLHDE---PYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEI--------L  246 (312)
T ss_dssp             EEEECCCSSCEECCSS---CBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHH--------H
T ss_pred             eEEEEEcchhhhcccC---cccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHHH--------h
Confidence            9999999999876542   22345689999999998876664 4899999999999999999999754221        0


Q ss_pred             HhhhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcCC
Q 048419          552 KELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLGD  607 (653)
Q Consensus       552 ~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  607 (653)
                      ..             .. .........+.+++.+||+.||.+||++.|++++-.-.
T Consensus       247 ~~-------------~~-~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~~~~~  288 (312)
T 2iwi_A          247 EA-------------EL-HFPAHVSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQ  288 (312)
T ss_dssp             HT-------------CC-CCCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHSTTTC
T ss_pred             hh-------------cc-CCcccCCHHHHHHHHHHccCChhhCcCHHHHhcChhhc
Confidence            00             00 01112235688999999999999999999999976543

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=100.00  E-value=7.8e-39  Score=333.42  Aligned_cols=265  Identities=20%  Similarity=0.309  Sum_probs=202.6

Q ss_pred             CcccCHHHHHHhhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC--chhhHHHHHHHHHHHhhcC--CCceeee
Q 048419          317 ARRFKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLR--HRNLVQL  392 (653)
Q Consensus       317 ~~~f~~~el~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~--H~niv~l  392 (653)
                      ...+.+..+....++|...+.||+|+||.||++.+.. ++.||||++...  .....+.+.+|+.++++++  |+||+++
T Consensus        15 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~   93 (313)
T 3cek_A           15 TENLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRL   93 (313)
T ss_dssp             -----CCEEEETTEEEEEEEEEECCSSEEEEEEECTT-CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCE
T ss_pred             CCCCCeeeeeeccceEEEEEEecCCCCEEEEEEEcCC-CcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEE
Confidence            4445555566667889999999999999999999864 889999998643  3455678999999999997  5999999


Q ss_pred             eeeecccceeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCC
Q 048419          393 HGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYL  472 (653)
Q Consensus       393 ~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~  472 (653)
                      ++++...+..++||| +.+++|.+++...     ..+++.+++.++.||++||.|||+   ++|+||||||+|||+++ +
T Consensus        94 ~~~~~~~~~~~lv~e-~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIl~~~-~  163 (313)
T 3cek_A           94 YDYEITDQYIYMVME-CGNIDLNSWLKKK-----KSIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIVD-G  163 (313)
T ss_dssp             EEEEECSSEEEEEEC-CCSEEHHHHHHHC-----SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEET-T
T ss_pred             EEEeecCCEEEEEEe-cCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCcccEEEEC-C
Confidence            999999999999999 5688999999764     348899999999999999999999   89999999999999964 8


Q ss_pred             cEEEEeecCcccccCCCCC-cccccccCCcccCcccccc-----------CCCCCccceeehHHHHHHHHhCCCCCChhh
Q 048419          473 NAKLGDFGLAKIYEHGANP-QTTHIVGTLGYLAPELTRT-----------GKATTSTDVYSYGILMLEVACGRRSIEPQK  540 (653)
Q Consensus       473 ~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~-----------~~~~~ksDV~s~Gvvl~elltG~~p~~~~~  540 (653)
                      .+||+|||+++........ ......|++.|+|||.+.+           ..++.++|||||||++|||++|+.||....
T Consensus       164 ~~kL~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~  243 (313)
T 3cek_A          164 MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII  243 (313)
T ss_dssp             EEEECCCSSSCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred             eEEEeeccccccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHH
Confidence            9999999999876443221 2234568999999999875           468889999999999999999999997543


Q ss_pred             hhhHHHHHHHHHhhhcccchhHhhhhcc-CcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          541 AAAELLLVDWVKELHLEGEITQAIDQTL-DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       541 ~~~~~~l~~~~~~~~~~~~~~~~~d~~l-~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                      ..... +             ...+++.. ...+......+.+++.+||+.||.+||++.|++++...
T Consensus       244 ~~~~~-~-------------~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~~  296 (313)
T 3cek_A          244 NQISK-L-------------HAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYV  296 (313)
T ss_dssp             SHHHH-H-------------HHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHH
T ss_pred             HHHHH-H-------------HHHHhcccccCCcccchHHHHHHHHHHccCCcccCcCHHHHhcCccc
Confidence            21110 0             11111111 01111124568899999999999999999999986543

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=100.00  E-value=8.7e-39  Score=333.59  Aligned_cols=255  Identities=25%  Similarity=0.388  Sum_probs=199.7

Q ss_pred             hhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC--chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEE
Q 048419          328 VTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLV  405 (653)
Q Consensus       328 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV  405 (653)
                      ..++|...+.||+|+||.||+|.+.+   .+|+|++...  .....+.+.+|+.++++++|+||+++++++.+.+..++|
T Consensus        31 ~~~~~~~~~~lg~G~~g~V~~~~~~~---~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv  107 (319)
T 2y4i_B           31 PFEQLEIGELIGKGRFGQVYHGRWHG---EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAII  107 (319)
T ss_dssp             CCSCEECCCBCCCSSSSEEEEEEESS---SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEE
T ss_pred             CHHHeEEeeEeccCCceEEEEEEEcC---eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEE
Confidence            34678889999999999999999864   4999998653  233345678899999999999999999999999999999


Q ss_pred             EeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccc
Q 048419          406 YDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIY  485 (653)
Q Consensus       406 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~  485 (653)
                      |||+++++|.+++....    ..+++.+++.++.||+.||.|||+   ++++||||||+||+++ ++.+||+|||+++..
T Consensus       108 ~e~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~al~~lH~---~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~  179 (319)
T 2y4i_B          108 TSLCKGRTLYSVVRDAK----IVLDVNKTRQIAQEIVKGMGYLHA---KGILHKDLKSKNVFYD-NGKVVITDFGLFSIS  179 (319)
T ss_dssp             CBCCCSEEHHHHTTSSC----CCCCSHHHHHHHHHHHHHHHHHHH---TTCCCCCCCSTTEEEC---CCEECCCSCCC--
T ss_pred             eecccCCcHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHh---CCccccCCChhhEEEe-CCCEEEeecCCcccc
Confidence            99999999999997642    458999999999999999999999   8999999999999998 679999999998765


Q ss_pred             cCCC----CCcccccccCCcccCcccccc---------CCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHH
Q 048419          486 EHGA----NPQTTHIVGTLGYLAPELTRT---------GKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVK  552 (653)
Q Consensus       486 ~~~~----~~~~~~~~gt~~y~aPE~~~~---------~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~  552 (653)
                      ....    ........|++.|+|||.+..         ..++.++|||||||++|||++|+.||........   ...+.
T Consensus       180 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~---~~~~~  256 (319)
T 2y4i_B          180 GVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAI---IWQMG  256 (319)
T ss_dssp             --------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHH---HHHHH
T ss_pred             ccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH---HHHhc
Confidence            3211    122233468999999999864         3478899999999999999999999986543221   11111


Q ss_pred             hhhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcCC
Q 048419          553 ELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLGD  607 (653)
Q Consensus       553 ~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  607 (653)
                      .    +.     .+.+.  .......+.+++.+||+.||.+|||+.++++.|+..
T Consensus       257 ~----~~-----~~~~~--~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l  300 (319)
T 2y4i_B          257 T----GM-----KPNLS--QIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKL  300 (319)
T ss_dssp             T----TC-----CCCCC--CSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC
T ss_pred             c----CC-----CCCCC--cCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence            1    10     01110  001234588999999999999999999999999864

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=100.00  E-value=1.9e-38  Score=331.73  Aligned_cols=250  Identities=24%  Similarity=0.408  Sum_probs=204.0

Q ss_pred             HHHHhhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCch------hhHHHHHHHHHHHhhcC--CCceeeeeee
Q 048419          324 ELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQ------QGMKEFVAEIMSMGRLR--HRNLVQLHGW  395 (653)
Q Consensus       324 el~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~--H~niv~l~g~  395 (653)
                      +.....++|...+.||+|+||.||+|.+..+++.||||++.....      ...+.+.+|+.++++++  |+||++++++
T Consensus        37 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~  116 (320)
T 3a99_A           37 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDW  116 (320)
T ss_dssp             ---CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEE
T ss_pred             ccCCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEE
Confidence            344556789999999999999999999988999999999865421      12245678999999996  5999999999


Q ss_pred             ecccceeEEEEeccCC-CCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEc-CCCc
Q 048419          396 CRKQDELLLVYDYVPN-GSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLD-TYLN  473 (653)
Q Consensus       396 ~~~~~~~~lV~E~~~~-gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~-~~~~  473 (653)
                      +...+..++|+|++.+ ++|.+++...     ..+++..++.++.||++||.|||+   ++|+||||||+|||++ .++.
T Consensus       117 ~~~~~~~~lv~e~~~~~~~L~~~l~~~-----~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~  188 (320)
T 3a99_A          117 FERPDSFVLILERPEPVQDLFDFITER-----GALQEELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGE  188 (320)
T ss_dssp             EECSSEEEEEEECCSSEEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTTE
T ss_pred             EecCCcEEEEEEcCCCCccHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCcEeCCCCHHHEEEeCCCCC
Confidence            9999999999999976 8999998753     348899999999999999999999   8999999999999999 7899


Q ss_pred             EEEEeecCcccccCCCCCcccccccCCcccCccccccCCC-CCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHH
Q 048419          474 AKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKA-TTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVK  552 (653)
Q Consensus       474 ~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~  552 (653)
                      +||+|||+++.....   ......||+.|+|||++.+..+ +.++|||||||++|||++|+.||......        ..
T Consensus       189 ~kL~Dfg~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~--------~~  257 (320)
T 3a99_A          189 LKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI--------IR  257 (320)
T ss_dssp             EEECCCTTCEECCSS---CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHH--------HH
T ss_pred             EEEeeCccccccccc---cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhhh--------hc
Confidence            999999999876532   2234568999999999887665 67899999999999999999999754321        00


Q ss_pred             hhhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          553 ELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       553 ~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                      .     .        . .........+.+++.+||+.||.+|||+.|++++-.-
T Consensus       258 ~-----~--------~-~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~hp~~  297 (320)
T 3a99_A          258 G-----Q--------V-FFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWM  297 (320)
T ss_dssp             C-----C--------C-CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGG
T ss_pred             c-----c--------c-cccccCCHHHHHHHHHHccCChhhCcCHHHHhcCHhh
Confidence            0     0        0 0011123568899999999999999999999986543

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=100.00  E-value=1.9e-37  Score=323.13  Aligned_cols=253  Identities=24%  Similarity=0.331  Sum_probs=181.4

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc-hhh-HHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEe
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS-QQG-MKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYD  407 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~-~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E  407 (653)
                      ++|...+.||+|+||.||+|.+..+|+.||||++.... ... .+.+.++..+++.++||||+++++++.+.+..++|||
T Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e  104 (318)
T 2dyl_A           25 NDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAME  104 (318)
T ss_dssp             GGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEC
T ss_pred             ccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEEe
Confidence            56888999999999999999999889999999997543 222 3344455567888899999999999999999999999


Q ss_pred             ccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCC-CeEecCCCCCcEEEcCCCcEEEEeecCccccc
Q 048419          408 YVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQ-RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE  486 (653)
Q Consensus       408 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~-~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~  486 (653)
                      |+ ++.+..+....    ...+++..++.++.||++||.|||+   + +++|+||||+||+++.++.+||+|||++....
T Consensus       105 ~~-~~~~~~l~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~---~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~  176 (318)
T 2dyl_A          105 LM-GTCAEKLKKRM----QGPIPERILGKMTVAIVKALYYLKE---KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLV  176 (318)
T ss_dssp             CC-SEEHHHHHHHH----TSCCCHHHHHHHHHHHHHHHHHHHH---HHCCCCCCCCGGGEEECTTSCEEECCCTTC----
T ss_pred             cc-CCcHHHHHHHh----ccCCCHHHHHHHHHHHHHHHHHHHh---hCCEEeCCCCHHHEEECCCCCEEEEECCCchhcc
Confidence            99 44555444332    2458999999999999999999998   5 99999999999999999999999999997654


Q ss_pred             CCCCCcccccccCCcccCccccc-----cCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchh
Q 048419          487 HGANPQTTHIVGTLGYLAPELTR-----TGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEIT  561 (653)
Q Consensus       487 ~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~  561 (653)
                      ...  ......|++.|+|||.+.     ...++.++|||||||++|||++|+.||........ .+......     .  
T Consensus       177 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~~~~~-----~--  246 (318)
T 2dyl_A          177 DDK--AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFE-VLTKVLQE-----E--  246 (318)
T ss_dssp             ------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHH-HHHHHHHS-----C--
T ss_pred             CCc--cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHH-HHHHHhcc-----C--
Confidence            322  223456899999999984     45688999999999999999999999975332211 11111110     0  


Q ss_pred             HhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          562 QAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       562 ~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                         .+.+. ........+.+++.+||+.||.+||++.|++++-
T Consensus       247 ---~~~~~-~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~  285 (318)
T 2dyl_A          247 ---PPLLP-GHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHS  285 (318)
T ss_dssp             ---CCCCC-SSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTSH
T ss_pred             ---CCCCC-ccCCCCHHHHHHHHHHccCChhHCcCHHHHhhCH
Confidence               00010 0011235688999999999999999999998743

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=100.00  E-value=3.7e-37  Score=335.75  Aligned_cols=256  Identities=23%  Similarity=0.288  Sum_probs=189.0

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhc-CCCceeeeeeeecccceeEEEEec
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRL-RHRNLVQLHGWCRKQDELLLVYDY  408 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~E~  408 (653)
                      +.|...++||+|+||+||.+.. .+|+.||||++...   ..+.+.+|+.+++++ +||||+++++++.+.+..++||||
T Consensus        15 ~~~~~~~~LG~G~~g~V~~~~~-~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~   90 (434)
T 2rio_A           15 NLVVSEKILGYGSSGTVVFQGS-FQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALEL   90 (434)
T ss_dssp             SCEEEEEEEEECSTTCEEEEEE-SSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECC
T ss_pred             heeeccCeEeeCCCeEEEEEEE-ECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEec
Confidence            3455678999999999976544 35899999998543   345678999999987 899999999999999999999999


Q ss_pred             cCCCCchhhhhccccccc--ccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCC-------------Cc
Q 048419          409 VPNGSLDKLLFDKDHKLR--KLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTY-------------LN  473 (653)
Q Consensus       409 ~~~gsL~~~l~~~~~~~~--~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~-------------~~  473 (653)
                      |. |+|.+++........  ...++..++.++.||+.||+|||+   ++|+||||||+|||++.+             +.
T Consensus        91 ~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~  166 (434)
T 2rio_A           91 CN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLR  166 (434)
T ss_dssp             CS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEECCHHHHSCCTTCCCSCE
T ss_pred             CC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEecCcccccccccCCCceE
Confidence            95 699999976542111  112455678899999999999999   899999999999999654             48


Q ss_pred             EEEEeecCcccccCCCCC---cccccccCCcccCcccccc-------CCCCCccceeehHHHHHHHHh-CCCCCChhhhh
Q 048419          474 AKLGDFGLAKIYEHGANP---QTTHIVGTLGYLAPELTRT-------GKATTSTDVYSYGILMLEVAC-GRRSIEPQKAA  542 (653)
Q Consensus       474 ~kl~DfGla~~~~~~~~~---~~~~~~gt~~y~aPE~~~~-------~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~  542 (653)
                      +||+|||+++........   ......||+.|+|||++.+       ..++.++|||||||++|||++ |+.||......
T Consensus       167 ~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~  246 (434)
T 2rio_A          167 ILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSR  246 (434)
T ss_dssp             EEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTH
T ss_pred             EEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhh
Confidence            999999999976543221   1234579999999999865       568999999999999999999 99999754332


Q ss_pred             hHHHHHHHHHhhhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          543 AELLLVDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       543 ~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                      ..    ............       ...........+.+++.+||+.||.+|||+.||+++-
T Consensus       247 ~~----~i~~~~~~~~~~-------~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~hp  297 (434)
T 2rio_A          247 ES----NIIRGIFSLDEM-------KCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHP  297 (434)
T ss_dssp             HH----HHHHTCCCCCCC-------TTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTSG
T ss_pred             HH----HHhcCCCCcccc-------cccccccchHHHHHHHHHHhhCChhhCCCHHHHHhCC
Confidence            11    111111110000       0112334567899999999999999999999999743

>1qmo_E Mannose binding lectin, FRIL; crosslink, hematopoietic progenitor, sugar complex; HET: MAN; 3.5A {Dolichos lab lab} SCOP: b.29.1.1

Probab=100.00  E-value=1.1e-36  Score=268.46  Aligned_cols=113  Identities=31%  Similarity=0.444  Sum_probs=104.8

Q ss_pred             CceEEEEeecccccccCCCCCCeeeEecCCCCcCCcccCccccCCCCccccccCCCCceEEEEEecCCceEEEEEEeeCC
Q 048419          121 TRMLAVEFDIIQNTELIDINDNHVGIDISSLISSASEPASYYSGNNHRIPILLRSGDPIQAWVDYSSQEMLINVSICPLG  200 (653)
Q Consensus       121 ~~~vaVEFDt~~n~~~~d~~~~Hvgid~ns~~s~~~~~~~~~~~~~~~~~~~l~~g~~~~~~I~Y~~~~~~l~v~~~~~~  200 (653)
                      ||+|||||||++|.+++||++||||||+||+.|.++++|            ++.+|+.++|||+||+.+++|+|++++.+
T Consensus         1 n~~vAVEFDT~~N~e~~Dp~~nHVGIdvNsi~S~~s~~~------------~l~sG~~~~v~I~Yd~~~~~L~V~l~~~~   68 (133)
T 1qmo_E            1 SNVVAVEFDTYLNPDYGDPNYIHIGIDVNSIRSKVTAKW------------DWQNGKIATAHISYNSVSKRLSVTSYYAG   68 (133)
T ss_dssp             CCCEEEEEECSCCGGGTCCSSCEEEEEESSSSCSEEEEC------------CCCTTSCEEEEEEEETTTTEEEEEEECSS
T ss_pred             CCEEEEEEeCCcCccccCCCCCeeEEecccccccceeee------------EEcCCCEEEEEEEEeCCCcEEEEEEccCC
Confidence            578999999999999899999999999999999988765            36799999999999999999999998765


Q ss_pred             CCCCCCCceeeeecCCcccccceEEeEecccCcccceeeecceeeeec
Q 048419          201 VPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLITASHNVHGWSISIG  248 (653)
Q Consensus       201 ~~~~~~~~l~~~~dL~~~l~~~~~vGFsastg~~~~~~~i~sWsf~~~  248 (653)
                      .   +.|+|++++||+++||++||||||||||...|.|+|++|+|++.
T Consensus        69 ~---~~p~ls~~vdLs~~l~e~v~VGFSAsTG~~~~~h~IlsWsF~s~  113 (133)
T 1qmo_E           69 S---KPATLSYDIELHTVLPEWVRVGLSASTGQDKERNTVHSWSFTSS  113 (133)
T ss_dssp             S---CCEEEEEECCGGGTSCSEEEEEEEEECSSSCCEEEEEEEEEEEE
T ss_pred             C---ccceEEEeechHHhccccEEEEEEeccCCCcceeEEEEEEEEee
Confidence            4   27899999999999999999999999999999999999999875

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=100.00  E-value=1.8e-37  Score=349.18  Aligned_cols=259  Identities=29%  Similarity=0.378  Sum_probs=201.7

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC-chhhHHHHHHHHHHHhhcCCCceeeeeeeecc------ccee
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN-SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRK------QDEL  402 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~------~~~~  402 (653)
                      ++|...+.||+|+||.||+|.+..+|..||||++... .....+.+.+|+.++++++||||+++++++..      .+..
T Consensus        14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~   93 (676)
T 3qa8_A           14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLP   93 (676)
T ss_dssp             ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSC
T ss_pred             CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeE
Confidence            6799999999999999999999888999999998654 44556789999999999999999999999766      6678


Q ss_pred             EEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCc---EEEEee
Q 048419          403 LLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLN---AKLGDF  479 (653)
Q Consensus       403 ~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~---~kl~Df  479 (653)
                      ++||||+++|+|.+++.....  ...+++..++.++.|++.||.|||+   .+|+||||||+||+++.++.   +||+||
T Consensus        94 ~LVmEy~~ggsL~~~L~~~~~--~~~lse~~i~~I~~QLl~aL~yLHs---~gIVHrDLKP~NILl~~~g~~~~vKL~DF  168 (676)
T 3qa8_A           94 LLAMEYCEGGDLRKYLNQFEN--CCGLKEGPIRTLLSDISSALRYLHE---NRIIHRDLKPENIVLQPGPQRLIHKIIDL  168 (676)
T ss_dssp             CCEEECCSSCBHHHHHHSSSC--TTCCCSSHHHHHHHHHHHHHHHHHH---TTBCCCCCCSTTEEEECCSSSCEEEECSC
T ss_pred             EEEEEeCCCCCHHHHHHhccc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCCHHHeEeecCCCceeEEEccc
Confidence            999999999999999977542  3458999999999999999999999   89999999999999987665   999999


Q ss_pred             cCcccccCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccc
Q 048419          480 GLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGE  559 (653)
Q Consensus       480 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~  559 (653)
                      |++.......  ......||+.|+|||.+.+..++.++|||||||++|||++|+.||.......     .|.........
T Consensus       169 G~a~~~~~~~--~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~-----~~~~~i~~~~~  241 (676)
T 3qa8_A          169 GYAKELDQGE--LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPV-----QWHGKVREKSN  241 (676)
T ss_dssp             CCCCBTTSCC--CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHH-----HSSTTCC----
T ss_pred             cccccccccc--ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchh-----hhhhhhhcccc
Confidence            9998765432  2234578999999999999999999999999999999999999997543211     11111100000


Q ss_pred             hhHhhh----------hcc---CcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHH
Q 048419          560 ITQAID----------QTL---DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRV  600 (653)
Q Consensus       560 ~~~~~d----------~~l---~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev  600 (653)
                      ......          ..+   ..........+.+++.+||+.||.+|||+.|+
T Consensus       242 ~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~el  295 (676)
T 3qa8_A          242 EHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQN  295 (676)
T ss_dssp             --CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTC
T ss_pred             hhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHH
Confidence            000000          000   12233456889999999999999999999663

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=100.00  E-value=9.9e-37  Score=331.71  Aligned_cols=250  Identities=22%  Similarity=0.282  Sum_probs=186.7

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhc-CCCceeeeeeeecccceeEEEEec
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRL-RHRNLVQLHGWCRKQDELLLVYDY  408 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~E~  408 (653)
                      .+|...++||+|+||+||.... .+++.||||++.....   ..+.+|+.+++++ +||||+++++++.+.+..++||||
T Consensus        24 ~~y~~~~~LG~G~~G~V~~~~~-~~~~~vAvK~~~~~~~---~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~   99 (432)
T 3p23_A           24 ISFCPKDVLGHGAEGTIVYRGM-FDNRDVAVKRILPECF---SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIEL   99 (432)
T ss_dssp             EEEEEEEEEEECGGGCEEEEEE-SSSSEEEEEEECTTTE---EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             EEEecCCeeecCcCEEEEEEEE-eCCeEEEEEEECHHHH---HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEEC
Confidence            4688889999999998554333 3588999999965432   2356799999999 799999999999999999999999


Q ss_pred             cCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcC-----CCcEEEEeecCcc
Q 048419          409 VPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDT-----YLNAKLGDFGLAK  483 (653)
Q Consensus       409 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~-----~~~~kl~DfGla~  483 (653)
                      |+ |+|.+++....    ..+.+..++.++.||+.||.|||+   ++|+||||||+|||++.     ...+||+|||+++
T Consensus       100 ~~-g~L~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~  171 (432)
T 3p23_A          100 CA-ATLQEYVEQKD----FAHLGLEPITLLQQTTSGLAHLHS---LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCK  171 (432)
T ss_dssp             CS-EEHHHHHHSSS----CCCCSSCHHHHHHHHHHHHHHHHH---TTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEE
T ss_pred             CC-CCHHHHHHhcC----CCccchhHHHHHHHHHHHHHHHHH---CcCEeCCCCHHHEEEecCCCCCceeEEEeccccee
Confidence            96 59999997653    235566778999999999999999   89999999999999943     3468899999998


Q ss_pred             cccCCCC--CcccccccCCcccCccccc---cCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhhcc
Q 048419          484 IYEHGAN--PQTTHIVGTLGYLAPELTR---TGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELHLE  557 (653)
Q Consensus       484 ~~~~~~~--~~~~~~~gt~~y~aPE~~~---~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~  557 (653)
                      .......  .......||+.|+|||++.   ...++.++|||||||++|||++ |+.||..........       ....
T Consensus       172 ~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~-------~~~~  244 (432)
T 3p23_A          172 KLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANI-------LLGA  244 (432)
T ss_dssp             CC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHH-------HTTC
T ss_pred             eccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHH-------Hhcc
Confidence            7653321  2234457999999999997   4567889999999999999999 889986543221100       0000


Q ss_pred             cchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          558 GEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       558 ~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                      ... .     ...........+.+|+.+||+.||.+|||+.||+++-
T Consensus       245 ~~~-~-----~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~hp  285 (432)
T 3p23_A          245 CSL-D-----CLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHP  285 (432)
T ss_dssp             CCC-T-----TSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTST
T ss_pred             CCc-c-----ccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHhCc
Confidence            000 0     0111123455688999999999999999999999643

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=100.00  E-value=1.1e-35  Score=307.80  Aligned_cols=230  Identities=22%  Similarity=0.273  Sum_probs=181.6

Q ss_pred             hcCcCcc-eeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHH-hhcCCCceeeeeeeecc----ccee
Q 048419          329 TKGFGEQ-NLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSM-GRLRHRNLVQLHGWCRK----QDEL  402 (653)
Q Consensus       329 t~~f~~~-~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l-~~l~H~niv~l~g~~~~----~~~~  402 (653)
                      .++|... ++||+|+||.||+|.+..+++.||||++...     ..+.+|+.++ +.++||||+++++++..    ....
T Consensus        16 ~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~   90 (299)
T 3m2w_A           16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL   90 (299)
T ss_dssp             GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred             ccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc-----HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceE
Confidence            3556666 7899999999999999989999999998532     3567888887 55689999999999876    6778


Q ss_pred             EEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcC---CCcEEEEee
Q 048419          403 LLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDT---YLNAKLGDF  479 (653)
Q Consensus       403 ~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~Df  479 (653)
                      ++||||+++|+|.+++....   ...+++.+++.++.|++.||.|||+   ++|+||||||+|||++.   ++.+||+||
T Consensus        91 ~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~~~kl~Df  164 (299)
T 3m2w_A           91 LIVMECLDGGELFSRIQDRG---DQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDF  164 (299)
T ss_dssp             EEEECCCCSCBHHHHHHHCT---TCCCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSTTCCEEECCC
T ss_pred             EEEEeecCCCcHHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEecCCCCCcEEEecc
Confidence            99999999999999998754   3458999999999999999999999   89999999999999988   788999999


Q ss_pred             cCcccccCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccc
Q 048419          480 GLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGE  559 (653)
Q Consensus       480 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~  559 (653)
                      |++....                       +..++.++|||||||++|||++|+.||........            ...
T Consensus       165 g~a~~~~-----------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~------------~~~  209 (299)
T 3m2w_A          165 GFAKETT-----------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI------------SPG  209 (299)
T ss_dssp             TTCEECT-----------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------------------CC
T ss_pred             ccccccc-----------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhh------------hHH
Confidence            9987532                       23467899999999999999999999975432110            000


Q ss_pred             hhHhhhhccCcCCH----HHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          560 ITQAIDQTLDYYDL----AEAELVLNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       560 ~~~~~d~~l~~~~~----~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                      +...+.......+.    .....+.+++.+||+.||.+|||+.|++++.
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~hp  258 (299)
T 3m2w_A          210 MKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHP  258 (299)
T ss_dssp             SCCSSCTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred             HHHHHhhccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcCh
Confidence            00000000001111    1246789999999999999999999999854

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=100.00  E-value=3.6e-36  Score=325.79  Aligned_cols=246  Identities=15%  Similarity=0.108  Sum_probs=185.0

Q ss_pred             hhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc---hhhHHHHHHHHHHHhhcCC-Cceeeeee---------
Q 048419          328 VTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS---QQGMKEFVAEIMSMGRLRH-RNLVQLHG---------  394 (653)
Q Consensus       328 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H-~niv~l~g---------  394 (653)
                      .++.|...++||+|+||.||+|.+..+|+.||||++....   ....+.+.+|+.+++.++| +|...+..         
T Consensus        76 ~~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~  155 (413)
T 3dzo_A           76 RPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFD  155 (413)
T ss_dssp             CCEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCE
T ss_pred             CceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchh
Confidence            3455777899999999999999999899999999987432   2336789999999999987 32211111         


Q ss_pred             ------------eecc-----cceeEEEEeccCCCCchhhhhccc--ccccccchhhhHHHHHHHHHHHHHHHHhcCCCC
Q 048419          395 ------------WCRK-----QDELLLVYDYVPNGSLDKLLFDKD--HKLRKLLTWDQRYKILIGIAQSLLYLHEECNQR  455 (653)
Q Consensus       395 ------------~~~~-----~~~~~lV~E~~~~gsL~~~l~~~~--~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~  455 (653)
                                  ++..     ....+++|+++ +++|.+++....  ......+++..++.++.||++||+|||+   ++
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~  231 (413)
T 3dzo_A          156 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH---YG  231 (413)
T ss_dssp             EEECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHH---TT
T ss_pred             hcccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHh---CC
Confidence                        1111     12356777766 689999885221  0113568999999999999999999999   99


Q ss_pred             eEecCCCCCcEEEcCCCcEEEEeecCcccccCCCCCcccccccCCcccCcccc----------ccCCCCCccceeehHHH
Q 048419          456 VVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELT----------RTGKATTSTDVYSYGIL  525 (653)
Q Consensus       456 ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~~~ksDV~s~Gvv  525 (653)
                      |+||||||+||||+.++.+||+|||+++.....    .....| +.|+|||++          ....++.++|||||||+
T Consensus       232 iiHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvi  306 (413)
T 3dzo_A          232 LVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLA  306 (413)
T ss_dssp             EECSCCCGGGEEECTTCCEEECCGGGCEETTEE----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHH
T ss_pred             cccCCcccceEEEecCCeEEEEeccceeecCCc----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHH
Confidence            999999999999999999999999999865432    334567 999999999          55568889999999999


Q ss_pred             HHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 048419          526 MLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVE  602 (653)
Q Consensus       526 l~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~  602 (653)
                      +|||++|+.||........               ....+.. ...    ..+.+.+|+.+||+.||.+||++.|+++
T Consensus       307 l~elltg~~Pf~~~~~~~~---------------~~~~~~~-~~~----~~~~~~~li~~~l~~dP~~Rpt~~~~l~  363 (413)
T 3dzo_A          307 IYWIWCADLPNTDDAALGG---------------SEWIFRS-CKN----IPQPVRALLEGFLRYPKEDRLLPLQAME  363 (413)
T ss_dssp             HHHHHHSSCCCCTTGGGSC---------------SGGGGSS-CCC----CCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             HHHHHHCCCCCCCcchhhh---------------HHHHHhh-ccc----CCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence            9999999999976543210               0111110 011    2366889999999999999999877754

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=100.00  E-value=3.3e-36  Score=309.65  Aligned_cols=230  Identities=11%  Similarity=0.102  Sum_probs=182.9

Q ss_pred             hcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc---hhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEE
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS---QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLV  405 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV  405 (653)
                      .++|...+.||+|+||.||+|.+..+++.||||++....   .+..+.+.+|+..+++++||||+++++++.+.+..++|
T Consensus        30 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv  109 (286)
T 3uqc_A           30 NGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVV  109 (286)
T ss_dssp             TTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             cCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEE
Confidence            367889999999999999999999889999999997542   34457899999999999999999999999999999999


Q ss_pred             EeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccc
Q 048419          406 YDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIY  485 (653)
Q Consensus       406 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~  485 (653)
                      |||+++++|.+++...       ....++.+++.||+.||+|||+   ++|+||||||+|||++.++.+||++++     
T Consensus       110 ~e~~~g~~L~~~l~~~-------~~~~~~~~i~~ql~~aL~~lH~---~givH~Dikp~NIll~~~g~~kl~~~~-----  174 (286)
T 3uqc_A          110 AEWIRGGSLQEVADTS-------PSPVGAIRAMQSLAAAADAAHR---AGVALSIDHPSRVRVSIDGDVVLAYPA-----  174 (286)
T ss_dssp             EECCCEEEHHHHHTTC-------CCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEEETTSCEEECSCC-----
T ss_pred             EEecCCCCHHHHHhcC-------CChHHHHHHHHHHHHHHHHHHH---CCCccCCCCcccEEEcCCCCEEEEecc-----
Confidence            9999999999998532       2344678899999999999999   899999999999999999999997433     


Q ss_pred             cCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhh
Q 048419          486 EHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAID  565 (653)
Q Consensus       486 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d  565 (653)
                                      |++|       ++.++|||||||++|||++|+.||...........   .. ....+....   
T Consensus       175 ----------------~~~~-------~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~---~~-~~~~~~~~~---  224 (286)
T 3uqc_A          175 ----------------TMPD-------ANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAP---AE-RDTAGQPIE---  224 (286)
T ss_dssp             ----------------CCTT-------CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEE---CC-BCTTSCBCC---
T ss_pred             ----------------ccCC-------CCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHH---HH-HHhccCCCC---
Confidence                            3333       68899999999999999999999986543210000   00 000000000   


Q ss_pred             hccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          566 QTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       566 ~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                        ...........+.+++.+||+.||.+| |+.|+++.|+.
T Consensus       225 --~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~  262 (286)
T 3uqc_A          225 --PADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQ  262 (286)
T ss_dssp             --HHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHH
T ss_pred             --hhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHH
Confidence              000011224568999999999999999 99999999964

>2dur_A VIP36;, vesicular integral-membrane protein VIP36; beta sandwich, carbohydrate binding protein, cargo receptor, transport; HET: MAN; 1.65A {Canis lupus familiaris} PDB: 2dup_A 2duq_A* 2duo_A* 2e6v_A*

Probab=100.00  E-value=2.6e-35  Score=294.49  Aligned_cols=198  Identities=17%  Similarity=0.154  Sum_probs=147.5

Q ss_pred             CCeEEecceEecCCCcEEecCCCCCceEEEEcCCCeecccCCCCceeeeEEEEEEEEecCCC-CCCCCceEEEEecCCCC
Q 048419           19 ANLSLEGAAYISTSGILTVTNKSEGLIGHALYPNPLRFKTSNKSVAIDFRTNFVFSILPKYP-DLGGQGLAFIIISTNRP   97 (653)
Q Consensus        19 ~~l~~~g~a~~~~~g~l~Lt~~~~~~~Gr~~y~~pi~~~~~~~~~~~sF~t~F~f~i~~~~~-~~~gdGlaF~l~~~~~~   97 (653)
                      .++.++|+|.+. +|.|+||++..++.||+||+.|+++        +||+|+|+|.|.+.+. ..+||||||+|+|....
T Consensus        25 ~~~~l~G~a~i~-~g~l~LT~~~~~~~G~~w~~~pi~~--------~sF~t~F~F~I~~~~~~~~~gdGlAF~l~~~~~~   95 (253)
T 2dur_A           25 PLWDFQGSTILT-SQYVRLTPDERSKEGSIWNHQPCFL--------KDWEMHVHFKVHGTGKKNLHGDGIALWYTRDRLV   95 (253)
T ss_dssp             CSEEEEETCEEC-SSCEEEECSSSSEEEEEEESSCBCC--------SSEEEEEEEEEECCCCTTCCCCEEEEEEESCCSC
T ss_pred             CCEEEccceEEE-CCEEEECCCCCCCEEEEEeCCCCcc--------CcEEEEEEEEEecCCCCCcCCCcEEEEEECCCCC
Confidence            689999999995 9999999999999999999999997        5899999999998765 56899999999997542


Q ss_pred             CCCCCCccccCCCcccCCCCCCCCceEEEEeecccccccCCCCCCeeeEecCCCCcCCcccCccccCC----CCcccccc
Q 048419           98 ENCLANQFLGLPNITMSSSTKFSTRMLAVEFDIIQNTELIDINDNHVGIDISSLISSASEPASYYSGN----NHRIPILL  173 (653)
Q Consensus        98 ~~~~~g~~lG~~~~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~~~Hvgid~ns~~s~~~~~~~~~~~~----~~~~~~~l  173 (653)
                          .|++||+.+.         ++.|||||||+.|.++.|    |+++||+++.+..+..+....+.    .+.....+
T Consensus        96 ----~G~~lG~~~~---------~~gvAVefDT~~n~~~~~----~~~~~I~~~~n~gs~~~d~~~dg~~~~~~~c~~~~  158 (253)
T 2dur_A           96 ----PGPVFGSKDN---------FHGLAIFLDTYPNDETTE----RVFPYISVMVNNGSLSYDHSKDGRWTELAGCTADF  158 (253)
T ss_dssp             ----EETBTEECSS---------CEEEEEEEECSCCCTTCC----SCSSEEEEEEEESCCCCCGGGTTGGGCCEEEECCC
T ss_pred             ----CCcccCcCCC---------CCEEEEEEECCCCCCCCC----CCCcEEEEEecCCceeeeccCCCcccccccccHhh
Confidence                4688996432         456999999999975433    44444444444444332211010    01122234


Q ss_pred             -CCCCceEEEEEecCCceEEEEEEeeCCCCCCCCCceeeeecCCcccccceEEeEecccCcccceeeecceeeeec
Q 048419          174 -RSGDPIQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLITASHNVHGWSISIG  248 (653)
Q Consensus       174 -~~g~~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~~l~~~~dL~~~l~~~~~vGFsastg~~~~~~~i~sWsf~~~  248 (653)
                       ..|+.++|||+|++.  +|+|++.+.+.. +..++  ..++ ...||++|||||||+||...+.|+|++|+|..-
T Consensus       159 ~n~g~~~~v~I~Y~~~--~L~V~l~~~~~~-~~~~~--~~~~-~v~Lp~~~yvGfSAaTG~~~~~h~Ilswsf~sl  228 (253)
T 2dur_A          159 RNRDHDTFLAVRYSRG--RLTVMTDLEDKN-EWKNC--IDIT-GVRLPTGYYFGASAGTGDLSDNHDIISMKLFQL  228 (253)
T ss_dssp             BTCSSCEEEEEEEETT--EEEEEEECSSSS-CCEEE--EEEC-CEECCSSBEEEEEEEESSSCCEEEEEEEEEEEC
T ss_pred             ccCCCCeEEEEEEECC--EEEEEEeCCCCC-CceEE--EEeC-CcccCCCcEEEEEeccCCCcceEEEEEEEEEec
Confidence             348999999999976  899999875432 33333  3344 335899999999999999999999999999753

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=100.00  E-value=7.3e-36  Score=343.67  Aligned_cols=238  Identities=25%  Similarity=0.325  Sum_probs=192.3

Q ss_pred             hcCcCcceeeeeeCcEEEEEEEeCC-CCcEEEEEEeccC-chhhHHHHHHHHHHHhhcCCCceeeeeeeecccce-----
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGLMPS-LGLEVAIKRIGHN-SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDE-----  401 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~-----  401 (653)
                      .++|...+.||+|+||.||+|.+.. +++.||||++... .....+.+.+|+.++++++||||++++++|...+.     
T Consensus        79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~  158 (681)
T 2pzi_A           79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPV  158 (681)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEE
T ss_pred             CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCce
Confidence            4789999999999999999999865 6899999998654 34456688999999999999999999999987765     


Q ss_pred             eEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecC
Q 048419          402 LLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGL  481 (653)
Q Consensus       402 ~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl  481 (653)
                      .+|||||+++++|.+++..       .+++.+++.++.||+.||.|||+   ++|+||||||+|||++.+ .+||+|||+
T Consensus       159 ~~lv~E~~~g~~L~~~~~~-------~l~~~~~~~~~~qi~~aL~~lH~---~giiHrDlkp~NIll~~~-~~kl~DFG~  227 (681)
T 2pzi_A          159 GYIVMEYVGGQSLKRSKGQ-------KLPVAEAIAYLLEILPALSYLHS---IGLVYNDLKPENIMLTEE-QLKLIDLGA  227 (681)
T ss_dssp             EEEEEECCCCEECC----C-------CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECSS-CEEECCCTT
T ss_pred             eEEEEEeCCCCcHHHHHhC-------CCCHHHHHHHHHHHHHHHHHHHH---CCCeecccChHHeEEeCC-cEEEEeccc
Confidence            7999999999999987743       48999999999999999999999   899999999999999886 899999999


Q ss_pred             cccccCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchh
Q 048419          482 AKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEIT  561 (653)
Q Consensus       482 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~  561 (653)
                      ++.....     ....||+.|+|||++.+. ++.++|||||||++|||++|..|+......                .+.
T Consensus       228 a~~~~~~-----~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~~----------------~~~  285 (681)
T 2pzi_A          228 VSRINSF-----GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYVD----------------GLP  285 (681)
T ss_dssp             CEETTCC-----SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEECS----------------SCC
T ss_pred             chhcccC-----CccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCcccccc----------------ccc
Confidence            9875432     345799999999998765 488999999999999999998887642110                000


Q ss_pred             HhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCC-HHHHHHHHc
Q 048419          562 QAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPD-MRRVVEFLL  605 (653)
Q Consensus       562 ~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs-~~evl~~L~  605 (653)
                      .      ..........+.+|+.+||+.||.+||+ +.++.+.|.
T Consensus       286 ~------~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~  324 (681)
T 2pzi_A          286 E------DDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLT  324 (681)
T ss_dssp             T------TCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHH
T ss_pred             c------cccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHH
Confidence            0      0000112356889999999999999995 555555443

>1gv9_A P58/ergic-53; lectin, carbohydrate binding; 1.46A {Rattus norvegicus} SCOP: b.29.1.13 PDB: 1r1z_A 3a4u_A 3lcp_A

Probab=100.00  E-value=1.1e-34  Score=290.68  Aligned_cols=204  Identities=16%  Similarity=0.185  Sum_probs=153.9

Q ss_pred             ceeEEeCCCCC-----CCeEEecceEecCCCcEEecCCCCCceEEEEcCCCeecccCCCCceeeeEEEEEEEEecCCCCC
Q 048419            8 TTSFLYNGFLH-----ANLSLEGAAYISTSGILTVTNKSEGLIGHALYPNPLRFKTSNKSVAIDFRTNFVFSILPKYPDL   82 (653)
Q Consensus         8 ~~~f~~~~f~~-----~~l~~~g~a~~~~~g~l~Lt~~~~~~~Gr~~y~~pi~~~~~~~~~~~sF~t~F~f~i~~~~~~~   82 (653)
                      ..||..+.+..     .++.++|+|.+ ++|.|+||++..++.||+||+.|+++        +||+|+|+|+|.+.. ..
T Consensus        33 ~~Sf~~P~~~~~~~~i~~w~~~G~a~i-~~~~IrLT~~~~~~~G~~w~~~p~~~--------~sF~t~F~F~I~~~~-~~  102 (260)
T 1gv9_A           33 KYSFKGPHLVQSDGTVPFWAHAGNAIP-SADQIRIAPSLKSQRGSVWTKTKAAF--------ENWEVEVTFRVTGRG-RI  102 (260)
T ss_dssp             GGCEECSSCSCTTSCBTTEEEEETCEE-CSSCEEEECSSTTCEEEEEESSCBCC--------SSEEEEEEEEEECSS-SC
T ss_pred             ceeEcCccccCCCCccCCeEEcccEEe-eCCEEEeCCCCCCCEEEEEECCCccc--------cCEEEEEEEEEecCC-CC
Confidence            45676665531     68999999998 58999999998899999999999964        799999999998764 36


Q ss_pred             CCCceEEEEecCCCCCCCCCCccccCCCcccCCCCCCCCceEEEEeecccccccC-CC------CCCeeeEecCC-CCcC
Q 048419           83 GGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTKFSTRMLAVEFDIIQNTELI-DI------NDNHVGIDISS-LISS  154 (653)
Q Consensus        83 ~gdGlaF~l~~~~~~~~~~~g~~lG~~~~~~~~~~~~~~~~vaVEFDt~~n~~~~-d~------~~~Hvgid~ns-~~s~  154 (653)
                      +||||||+|+|....    .|+++|+.+.         .+.|||||||+.|.++. +|      +++|||||+|+ +.|.
T Consensus       103 ~gdGlAF~l~~~~~~----~g~~~G~~~~---------~~gvaVefDT~~N~~~~~~p~I~~~indg~~~~d~~~d~~s~  169 (260)
T 1gv9_A          103 GADGLAIWYTENQGL----DGPVFGSADM---------WNGVGIFFDSFDNDGKKNNPAIVVVGNNGQINYDHQNDGATQ  169 (260)
T ss_dssp             CCCEEEEEEESSCCC----EEEETTECSC---------CEEEEEEEECCCC-----CCEEEEEEEESCCCCCHHHHHHHH
T ss_pred             CCCeEEEEEecCCCC----CCCccCCCCC---------CCEEEEEEECCCCCCCCCCCceEEEeCCCceEeecCCCcccc
Confidence            899999999986542    5678888432         35699999999996431 23      35677777664 4333


Q ss_pred             CcccCccccCCCCcccccc-CCCCceEEEEEecCCceEEEEEEeeCCCCCCCCCceeeeecCCcccccceEEeEecccCc
Q 048419          155 ASEPASYYSGNNHRIPILL-RSGDPIQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGL  233 (653)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~l-~~g~~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~~l~~~~dL~~~l~~~~~vGFsastg~  233 (653)
                      ....+.          ..+ .+|..++|||+|++.  +|+|.+.+...+......++..+| ...||++|||||||+||.
T Consensus       170 ~~~~c~----------~~~~n~g~~~~~~I~Y~~~--~L~V~l~~~~~~~~~~~~~~~~vd-~~~LP~~~~vGfSAaTG~  236 (260)
T 1gv9_A          170 ALASCQ----------RDFRNKPYPVRAKITYYQK--TLTVMINNGFTPDKNDYEFCAKVE-NMVIPTQGHFGISAATGG  236 (260)
T ss_dssp             CSEEEC----------CCCBSCSSCEEEEEEEETT--EEEEEEECSSCCCTTCCEEEEEET-TCCCCSSBEEEEEEECCS
T ss_pred             eeeccC----------hhhccCCCcEEEEEEEECC--EEEEEEeeccCCCCCcceEEEEEc-ccccCCCcEEEEEEeCCC
Confidence            322211          122 358999999999986  799999864222222346788888 677999999999999999


Q ss_pred             ccceeeecceeeee
Q 048419          234 ITASHNVHGWSISI  247 (653)
Q Consensus       234 ~~~~~~i~sWsf~~  247 (653)
                      ..+.|+|++|+|..
T Consensus       237 ~~e~hdIlsw~~~~  250 (260)
T 1gv9_A          237 LADDHDVLSFLTFQ  250 (260)
T ss_dssp             SCCEEEEEEEEEEE
T ss_pred             CcceEEEEEEEEEE
Confidence            99999999999975

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=100.00  E-value=2.4e-35  Score=310.34  Aligned_cols=243  Identities=18%  Similarity=0.151  Sum_probs=183.1

Q ss_pred             hcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc--------hhhHHHHHHHHHHHhhcC---------C-----
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS--------QQGMKEFVAEIMSMGRLR---------H-----  386 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~---------H-----  386 (653)
                      .++|...+.||+|+||.||+|++  +|+.||||++....        ....+.+.+|+.++++++         |     
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~--~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~   96 (336)
T 2vuw_A           19 TEKLQRCEKIGEGVFGEVFQTIA--DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIG   96 (336)
T ss_dssp             HHHHHTCEEEEEETTEEEEEEEE--TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCC
T ss_pred             cccchheeeecccCceEEEEEEe--CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhh
Confidence            35688899999999999999998  47999999997542        233477889999998886         4     


Q ss_pred             ------------Cceeeeeeeecc-------------cceeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHH
Q 048419          387 ------------RNLVQLHGWCRK-------------QDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGI  441 (653)
Q Consensus       387 ------------~niv~l~g~~~~-------------~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i  441 (653)
                                  |||+++++++.+             .+..++||||+++|++.+.+..      ..+++.+++.++.||
T Consensus        97 l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~------~~~~~~~~~~i~~qi  170 (336)
T 2vuw_A           97 LNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT------KLSSLATAKSILHQL  170 (336)
T ss_dssp             EEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT------TCCCHHHHHHHHHHH
T ss_pred             hcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh------cCCCHHHHHHHHHHH
Confidence                        555555555544             6789999999999987776643      347899999999999


Q ss_pred             HHHHHHHH-hcCCCCeEecCCCCCcEEEcCCC--------------------cEEEEeecCcccccCCCCCcccccccCC
Q 048419          442 AQSLLYLH-EECNQRVVHRDVKPSNILLDTYL--------------------NAKLGDFGLAKIYEHGANPQTTHIVGTL  500 (653)
Q Consensus       442 a~~L~yLH-~~~~~~ivH~Dlkp~NIll~~~~--------------------~~kl~DfGla~~~~~~~~~~~~~~~gt~  500 (653)
                      +.||.||| +   ++|+||||||+||||+.++                    .+||+|||+++.....      ...||+
T Consensus       171 ~~aL~~lH~~---~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~------~~~gt~  241 (336)
T 2vuw_A          171 TASLAVAEAS---LRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG------IVVFCD  241 (336)
T ss_dssp             HHHHHHHHHH---HCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT------EEECCC
T ss_pred             HHHHHHHHHh---CCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC------cEEEee
Confidence            99999999 8   8999999999999999887                    8999999999876532      347999


Q ss_pred             cccCccccccCCCCCccceeehHHH-HHHHHhCCCCCChhhhhhHHHHHHHHHhh-hcccchhHhhhhccCcCCHHHHHH
Q 048419          501 GYLAPELTRTGKATTSTDVYSYGIL-MLEVACGRRSIEPQKAAAELLLVDWVKEL-HLEGEITQAIDQTLDYYDLAEAEL  578 (653)
Q Consensus       501 ~y~aPE~~~~~~~~~ksDV~s~Gvv-l~elltG~~p~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~d~~l~~~~~~~~~~  578 (653)
                      .|+|||++.+.. +.++||||+|++ .+++++|..||.......  .+.+.+... .....       ............
T Consensus       242 ~y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~--~~~~~~~~~~~~~~~-------~~~~~~~~~s~~  311 (336)
T 2vuw_A          242 VSMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVLWLH--YLTDKMLKQMTFKTK-------CNTPAMKQIKRK  311 (336)
T ss_dssp             CTTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHHHHH--HHHHHHHHTCCCSSC-------CCSHHHHHHHHH
T ss_pred             cccChhhhcCCC-ccceehhhhhCCCCcccccccCCCcchhhhh--HHHHhhhhhhccCcc-------cchhhhhhcCHH
Confidence            999999998665 889999998777 777889999985421100  011111000 00000       000111235678


Q ss_pred             HHHHHHHcCCCCCCCCCCHHHHH-HH
Q 048419          579 VLNLGLFCSAPNPVYRPDMRRVV-EF  603 (653)
Q Consensus       579 l~~l~~~Cl~~dP~~RPs~~evl-~~  603 (653)
                      +.+|+.+||+.|     |+.|++ ++
T Consensus       312 ~~dli~~~L~~d-----sa~e~l~~H  332 (336)
T 2vuw_A          312 IQEFHRTMLNFS-----SATDLLCQH  332 (336)
T ss_dssp             HHHHHHHGGGSS-----SHHHHHHHC
T ss_pred             HHHHHHHHhccC-----CHHHHHhcC
Confidence            999999999966     999998 65

>1nls_A Concanavalin A; lectin, agglutinin; 0.94A {Canavalia ensiformis} SCOP: b.29.1.1 PDB: 1bxh_A* 1apn_A 1ces_A 1cjp_A* 1c57_A 1cvn_A* 1con_A 1dq1_A 1dq2_A 1dq4_A 1dq5_A 1dq6_A 1enq_A 1enr_A 1ens_A 1gic_A* 1dq0_A 1hqw_A 1gkb_A* 1i3h_A ...

Probab=99.98  E-value=7.4e-33  Score=270.64  Aligned_cols=115  Identities=28%  Similarity=0.408  Sum_probs=106.1

Q ss_pred             CCceEEEEeecccccccCCCCCCeeeEecCCCCcCCcccCccccCCCCccccccCCCCceEEEEEecCCceEEEEEEeeC
Q 048419          120 STRMLAVEFDIIQNTELIDINDNHVGIDISSLISSASEPASYYSGNNHRIPILLRSGDPIQAWVDYSSQEMLINVSICPL  199 (653)
Q Consensus       120 ~~~~vaVEFDt~~n~~~~d~~~~Hvgid~ns~~s~~~~~~~~~~~~~~~~~~~l~~g~~~~~~I~Y~~~~~~l~v~~~~~  199 (653)
                      +||+|||||||++|.+|+||++|||||||||+.|.++++|            ++.+|+.++|||+||+.+++|+|++.+.
T Consensus         1 ~n~~vAVEFDT~~n~~~~Dp~~nHVGIdvNs~~S~~~~~~------------~l~~g~~~~v~I~Yd~~~~~L~V~l~~~   68 (237)
T 1nls_A            1 ADTIVAVELDTYPNTDIGDPSYPHIGIDIKSVRSKKTAKW------------NMQNGKVGTAHIIYNSVDKRLSAVVSYP   68 (237)
T ss_dssp             CCCEEEEEEECSCCGGGTCCSSCEEEEEESSSSCSEEEEC------------CCCTTCEEEEEEEEETTTTEEEEEEECT
T ss_pred             CCCEEEEEEeCCCCcccCCCCCCeeeEecCCccccccccc------------cccCCCEEEEEEEEeCCCCEEEEEEecC
Confidence            3689999999999999889999999999999999988775            3679999999999999999999999876


Q ss_pred             CCCCCCCCceeeeecCCcccccceEEeEecccCcccceeeecceeeeecC
Q 048419          200 GVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLITASHNVHGWSISIGG  249 (653)
Q Consensus       200 ~~~~~~~~~l~~~~dL~~~l~~~~~vGFsastg~~~~~~~i~sWsf~~~~  249 (653)
                      +.   ..|+|+++|||+++|+|+||||||||||...|.|+|++|+|++..
T Consensus        69 ~~---~~~~ls~~vdLs~~l~e~~~VGFSAsTG~~~~~h~IlsWsF~s~~  115 (237)
T 1nls_A           69 NA---DSATVSYDVDLDNVLPEWVRVGLSASTGLYKETNTILSWSFTSKL  115 (237)
T ss_dssp             TS---CCEEEEEECCGGGTSCSEEEEEEEEECSSSCCCCEEEEEEEEEEE
T ss_pred             CC---CcceEEEeeChHHhCccccEEEEEeccCCcceeeeeEEEEEEecc
Confidence            53   568999999999999999999999999999999999999998764

>1qmo_A Mannose binding lectin, FRIL; crosslink, hematopoietic progenitor, sugar complex; HET: MAN; 3.5A {Dolichos lab lab} SCOP: b.29.1.1

Probab=99.96  E-value=1.3e-28  Score=212.01  Aligned_cols=103  Identities=29%  Similarity=0.431  Sum_probs=93.6

Q ss_pred             CceeEEeCCCC--CCCeEEecceEecCCCcEEecCCCC------CceEEEEcCCCeecccCCCCceeeeEEEEEEEEecC
Q 048419            7 DTTSFLYNGFL--HANLSLEGAAYISTSGILTVTNKSE------GLIGHALYPNPLRFKTSNKSVAIDFRTNFVFSILPK   78 (653)
Q Consensus         7 ~~~~f~~~~f~--~~~l~~~g~a~~~~~g~l~Lt~~~~------~~~Gr~~y~~pi~~~~~~~~~~~sF~t~F~f~i~~~   78 (653)
                      .+++|+|+.|.  ..||+|+|||++.+ |.|+||+...      .++|||+|++||+|||+ +++++||+|+|+|.|.+.
T Consensus         2 ~~~~F~f~~F~~~~~nl~l~G~A~v~~-g~l~LT~~~~~g~~~~~s~Gra~Y~~Pv~l~d~-tg~vaSFsT~F~F~I~~~   79 (113)
T 1qmo_A            2 QSLSFSFTKFDPNQEDLIFQGHATSTN-NVLQVTKLDSAGNPVSSSAGRVLYSAPLRLWED-SAVLTSFDTIINFEISTP   79 (113)
T ss_dssp             EEEEEEESSCCSSCTTEEEEETCEEET-TEEECSCBCTTSCBCSSCEEEEEESSCEECCCT-TEEEEEEEEEEEEEEECS
T ss_pred             cceEEEcCCCCCCCCCeEEecceEcCC-CceEeCCCCCCCcccCCcEEEEEeCCCEEeeCC-CCCEEeeEEEEEEEEecC
Confidence            46799999997  68999999999985 9999998765      79999999999999999 999999999999999987


Q ss_pred             CCCCCCCceEEEEecCCCCCCCCCCccccCCCcc
Q 048419           79 YPDLGGQGLAFIIISTNRPENCLANQFLGLPNIT  112 (653)
Q Consensus        79 ~~~~~gdGlaF~l~~~~~~~~~~~g~~lG~~~~~  112 (653)
                      +...+||||||||+|....|. +.|+||||+|.+
T Consensus        80 ~~~~~gdGlAF~lap~~~~p~-s~g~~LGL~n~~  112 (113)
T 1qmo_A           80 YTSRIADGLAFFIAPPDSVIS-YHGGFLGLFPNA  112 (113)
T ss_dssp             SSSCCCCEEEEEEECTTCCCC-CCGGGTTTCSSC
T ss_pred             CCCCCCCeEEEEecCCCCCCC-CCccccccccCC
Confidence            777799999999999876676 899999999863

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.95  E-value=8.6e-30  Score=285.71  Aligned_cols=184  Identities=20%  Similarity=0.135  Sum_probs=130.5

Q ss_pred             eeeeCcEEEEEEEeCCCCcEEEEEEeccC----------chhhHHHHHHHHHHHhhc-CCCceeeeeeeecccceeEEEE
Q 048419          338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHN----------SQQGMKEFVAEIMSMGRL-RHRNLVQLHGWCRKQDELLLVY  406 (653)
Q Consensus       338 LG~G~fg~Vy~~~~~~~~~~vavK~~~~~----------~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~  406 (653)
                      .+.|+.|.+..++....|+.++||++...          .....++|.+|+++|+++ .|+||+++++++++++..||||
T Consensus       242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM  321 (569)
T 4azs_A          242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM  321 (569)
T ss_dssp             -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred             cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence            55666666665555445888999999643          123356799999999999 7999999999999999999999


Q ss_pred             eccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccccc
Q 048419          407 DYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE  486 (653)
Q Consensus       407 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~  486 (653)
                      ||++|++|.++|....     +++.   .+|+.||++||+|||+   ++||||||||+||||++++++||+|||+|+...
T Consensus       322 Eyv~G~~L~d~i~~~~-----~l~~---~~I~~QIl~AL~ylH~---~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~  390 (569)
T 4azs_A          322 EKLPGRLLSDMLAAGE-----EIDR---EKILGSLLRSLAALEK---QGFWHDDVRPWNVMVDARQHARLIDFGSIVTTP  390 (569)
T ss_dssp             ECCCSEEHHHHHHTTC-----CCCH---HHHHHHHHHHHHHHHH---TTCEESCCCGGGEEECTTSCEEECCCTTEESCC
T ss_pred             ecCCCCcHHHHHHhCC-----CCCH---HHHHHHHHHHHHHHHH---CCceeccCchHhEEECCCCCEEEeecccCeeCC
Confidence            9999999999997653     2443   3589999999999999   999999999999999999999999999998765


Q ss_pred             CCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCC
Q 048419          487 HGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRR  534 (653)
Q Consensus       487 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~  534 (653)
                      .... .....+||++|+|||++.+ .+..++|+|++|+++++|.++..
T Consensus       391 ~~~~-~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~  436 (569)
T 4azs_A          391 QDCS-WPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWS  436 (569)
T ss_dssp             ---C-CSHHHHHHHHHHHHHHC------------------CCCCTTHH
T ss_pred             CCCc-cccCceechhhccHHHhCC-CCCCcccccccccchhhhccccc
Confidence            4322 2344679999999999865 56778999999999988866543

>2a6y_A EMP47P (FORM1); beta sandwich, carbohydrate binding protein, cargo receptor, structural genomics, NPPSFA; 1.42A {Saccharomyces cerevisiae} SCOP: b.29.1.13

Probab=99.93  E-value=5.9e-26  Score=226.03  Aligned_cols=185  Identities=15%  Similarity=0.157  Sum_probs=140.3

Q ss_pred             CCeEEecceEecCCCcEEecCCCCCceEEEEcCCCeecccCCCCceeeeEEEEEEEEecCCCCCCCCceEEEEecCCCCC
Q 048419           19 ANLSLEGAAYISTSGILTVTNKSEGLIGHALYPNPLRFKTSNKSVAIDFRTNFVFSILPKYPDLGGQGLAFIIISTNRPE   98 (653)
Q Consensus        19 ~~l~~~g~a~~~~~g~l~Lt~~~~~~~Gr~~y~~pi~~~~~~~~~~~sF~t~F~f~i~~~~~~~~gdGlaF~l~~~~~~~   98 (653)
                      .++.++|+|.+ +++.|+||++ ..+.|++|.+.|+++.       ++|+|+|+|+|.... ..+||||||++++....+
T Consensus        31 ~~w~~~G~a~v-~~~~IrLTp~-~~s~G~iW~~~p~~~~-------~~f~~~f~FrI~g~~-~~~gdGlAfwlt~~~~~~  100 (256)
T 2a6y_A           31 NNWQTGEQASL-EEGRIVLTSN-QNSKGSLWLKQGFDLK-------DSFTMEWTFRSVGYS-GQTDGGISFWFVQDSNIP  100 (256)
T ss_dssp             TTEEEEETCEE-ETBEEECCCS-TTCEEEEEESSCEEES-------SCEEEEEEEEEESCC-SCCSCEEEEEEEECSSSC
T ss_pred             CCeEEccceEE-eCCEEEECCC-CCceEEEeeCCCCccc-------CCEEEEEEEEEecCC-CCCCCeEEEEEeCCCCcc
Confidence            68999999999 5999999998 6779999888888753       579999999998764 338999999999875432


Q ss_pred             CCCCCccccCCCcccCCCCCCCCceEEEEeecccccccCCCC------CCeeeEecCCCCcCCcccCccccCCCCccccc
Q 048419           99 NCLANQFLGLPNITMSSSTKFSTRMLAVEFDIIQNTELIDIN------DNHVGIDISSLISSASEPASYYSGNNHRIPIL  172 (653)
Q Consensus        99 ~~~~g~~lG~~~~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~------~~Hvgid~ns~~s~~~~~~~~~~~~~~~~~~~  172 (653)
                        ..|+.+|..+.-+         -+||||||+.|.   .|.      +.|+++|.+++.+.....+.          ..
T Consensus       101 --~~g~~~G~~~~f~---------GlaV~fDT~~n~---~p~i~~~~Ndg~~~~d~~~~~~~~~~~c~----------~~  156 (256)
T 2a6y_A          101 --RDKQLYNGPVNYD---------GLQLLVDNNGPL---GPTLRGQLNDGQKPVDKTKIYDQSFASCL----------MG  156 (256)
T ss_dssp             --CCCTBTTBCTTCE---------EEEEEEESCSTT---CSEEEEEEEESSSCCCGGGHHHHCSEEEE----------CC
T ss_pred             --cCCcccCcCCCCC---------EEEEEEECCCCC---CceEEEEECCCceecccCCCcccceecce----------ee
Confidence              4677888875322         399999999873   343      56777776653333222221          11


Q ss_pred             c-CCCCceEEEEEec-CCceEEEEEEeeCCCCCCCCCceeeeecCCcc-cccce-EEeEecccC---cccceeeecceee
Q 048419          173 L-RSGDPIQAWVDYS-SQEMLINVSICPLGVPKPYRPLISLPIDLSSV-IDEYM-YTGFSASTG---LITASHNVHGWSI  245 (653)
Q Consensus       173 l-~~g~~~~~~I~Y~-~~~~~l~v~~~~~~~~~~~~~~l~~~~dL~~~-l~~~~-~vGFsastg---~~~~~~~i~sWsf  245 (653)
                      . .+|...++||.|+ +..+.|+|.+..           ..-+++..+ ||+++ ||||||+||   ...+.|.|++|+|
T Consensus       157 ~rn~~~~~~v~I~Y~~~~~~~L~V~i~~-----------~~c~~~~~v~LP~~~~~~GfSAaTG~~~~~~d~hdIls~~~  225 (256)
T 2a6y_A          157 YQDSSVPSTIRVTYDLEDDNLLKVQVDN-----------KVCFQTRKVRFPSGSYRIGVTAQNGAVNNNAESFEIFKMQF  225 (256)
T ss_dssp             CTTCSSCEEEEEEEEGGGTSEEEEEETT-----------EEEEEESCEECCSEEEEEEEEEECCSGGGCCCEEEEEEEEE
T ss_pred             cccCCCcEEEEEEEecCCCcEEEEEEcC-----------EEEEEECcEEeCCCCeEEEEEEeCCCCCCCcceEEEEEEEE
Confidence            2 3789999999999 778899999854           112334444 78997 699999999   7889999999999


Q ss_pred             eec
Q 048419          246 SIG  248 (653)
Q Consensus       246 ~~~  248 (653)
                      ...
T Consensus       226 ~~~  228 (256)
T 2a6y_A          226 FNG  228 (256)
T ss_dssp             EES
T ss_pred             Eec
Confidence            874

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.92  E-value=5.3e-26  Score=253.56  Aligned_cols=185  Identities=17%  Similarity=0.188  Sum_probs=145.9

Q ss_pred             CcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc--------hhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEE
Q 048419          333 GEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS--------QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLL  404 (653)
Q Consensus       333 ~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  404 (653)
                      ...++||+|+||.||+|...  +..+++|+.....        ....+.+.+|++++++++||||+++..++...+..+|
T Consensus       339 ~~~~~LG~G~fg~Vy~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~l  416 (540)
T 3en9_A          339 IPEHLIGKGAEADIKRDSYL--DFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRI  416 (540)
T ss_dssp             ---------CCEEEEEEECS--SCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEE
T ss_pred             CCCCEEeeCCCEEEEEEEEC--CCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEE
Confidence            44678999999999999654  6889999864321        1123568999999999999999977777777778899


Q ss_pred             EEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccc
Q 048419          405 VYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKI  484 (653)
Q Consensus       405 V~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~  484 (653)
                      ||||+++++|.+++..             +..++.|+++||.|||+   ++|+||||||+|||++.  ++||+|||+++.
T Consensus       417 VmE~~~ggsL~~~l~~-------------~~~i~~qi~~aL~~LH~---~gIiHrDiKp~NILl~~--~~kL~DFGla~~  478 (540)
T 3en9_A          417 MMSYINGKLAKDVIED-------------NLDIAYKIGEIVGKLHK---NDVIHNDLTTSNFIFDK--DLYIIDFGLGKI  478 (540)
T ss_dssp             EEECCCSEEHHHHSTT-------------CTHHHHHHHHHHHHHHH---TTEECTTCCTTSEEESS--SEEECCCTTCEE
T ss_pred             EEECCCCCCHHHHHHH-------------HHHHHHHHHHHHHHHHH---CcCccCCCCHHHEEECC--eEEEEECccCEE
Confidence            9999999999999854             45799999999999999   99999999999999998  999999999997


Q ss_pred             ccCCCCCc------ccccccCCcccCcccccc--CCCCCccceeehHHHHHHHHhCCCCCC
Q 048419          485 YEHGANPQ------TTHIVGTLGYLAPELTRT--GKATTSTDVYSYGILMLEVACGRRSIE  537 (653)
Q Consensus       485 ~~~~~~~~------~~~~~gt~~y~aPE~~~~--~~~~~ksDV~s~Gvvl~elltG~~p~~  537 (653)
                      ........      .....||+.|+|||++..  ..|+..+|+|+..+-.++.+.++.+|.
T Consensus       479 ~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~  539 (540)
T 3en9_A          479 SNLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV  539 (540)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred             CCCccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence            64422111      134679999999999986  567888999999999999888877664

>1nls_A Concanavalin A; lectin, agglutinin; 0.94A {Canavalia ensiformis} SCOP: b.29.1.1 PDB: 1bxh_A* 1apn_A 1ces_A 1cjp_A* 1c57_A 1cvn_A* 1con_A 1dq1_A 1dq2_A 1dq4_A 1dq5_A 1dq6_A 1enq_A 1enr_A 1ens_A 1gic_A* 1dq0_A 1hqw_A 1gkb_A* 1i3h_A ...

Probab=99.90  E-value=3.4e-24  Score=209.44  Aligned_cols=104  Identities=28%  Similarity=0.440  Sum_probs=92.4

Q ss_pred             CceeEEeCCCC--CCCeEEecceEecCCCcEEecCCCC------CceEEEEcCCCeecccCCCCceeeeEEEEEEEEecC
Q 048419            7 DTTSFLYNGFL--HANLSLEGAAYISTSGILTVTNKSE------GLIGHALYPNPLRFKTSNKSVAIDFRTNFVFSILPK   78 (653)
Q Consensus         7 ~~~~f~~~~f~--~~~l~~~g~a~~~~~g~l~Lt~~~~------~~~Gr~~y~~pi~~~~~~~~~~~sF~t~F~f~i~~~   78 (653)
                      ..++|.|+.|.  ..||+|+|+|++.++|.|+||+...      .++|||+|++||+|||+ +++++||+|+|+|.|.+.
T Consensus       124 ~~~~F~~~~F~~~~~nl~l~G~A~v~~~g~l~LT~~~~n~~~~~~~~Gra~Y~~Pv~lwd~-~~~vaSFsT~F~F~I~~~  202 (237)
T 1nls_A          124 NALHFMFNQFSKDQKDLILQGDATTGTDGNLELTRVSSNGSPQGSSVGRALFYAPVHIWES-SAVVASFEATFTFLIKSP  202 (237)
T ss_dssp             EEEEEEESCCCTTCTTEEEEETCEEEETTEEESSCBCTTSCBCSSCEEEEEESSCEECCCT-TEEEEEEEEEEEEECCCS
T ss_pred             ccchhhhccccccCCCeEEccceEecCCCceEecCCccCCccccCceEEEEeCCCEEeecC-CCCEeeeEEEEEEEEecC
Confidence            45799999997  4699999999998789999998763      68999999999999997 889999999999999876


Q ss_pred             CCCCCCCceEEEEecCC-CCCCCCCCccccCCCcc
Q 048419           79 YPDLGGQGLAFIIISTN-RPENCLANQFLGLPNIT  112 (653)
Q Consensus        79 ~~~~~gdGlaF~l~~~~-~~~~~~~g~~lG~~~~~  112 (653)
                       ...+||||||||+|.. ..|.+++|+||||+|.+
T Consensus       203 -~~~~g~GlAF~lap~~~~~p~~~~g~~LGL~n~~  236 (237)
T 1nls_A          203 -DSHPADGIAFFISNIDSSIPSGSTGRLLGLFPDA  236 (237)
T ss_dssp             -SSSCCCEEEEEEECTTCCCCTTCCGGGTTTCSSC
T ss_pred             -CCCCCccEEEEECCCCCCCCCCCCcCeeccccCC
Confidence             3458999999999987 46788999999999864

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.87  E-value=1.2e-22  Score=207.79  Aligned_cols=150  Identities=14%  Similarity=0.079  Sum_probs=121.0

Q ss_pred             HHHhhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCch------------------hhHHHHHHHHHHHhhcCC
Q 048419          325 LASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQ------------------QGMKEFVAEIMSMGRLRH  386 (653)
Q Consensus       325 l~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~------------------~~~~~~~~E~~~l~~l~H  386 (653)
                      +......|...+.||+|+||.||+|.+ .+|+.||||.+.....                  .....+.+|+.++++++ 
T Consensus        85 ~~~~~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~-  162 (282)
T 1zar_A           85 LVRSGKVDAIGKLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ-  162 (282)
T ss_dssp             HHHTTSCSEEEEEEEECSSEEEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT-
T ss_pred             HHhCCeEEEecCEeccCCCceEEEEEe-CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc-
Confidence            334445566779999999999999999 6799999999964321                  13467899999999999 


Q ss_pred             CceeeeeeeecccceeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcE
Q 048419          387 RNLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNI  466 (653)
Q Consensus       387 ~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NI  466 (653)
                       | +++.+++. .+..++||||+++++|.+ +..           .....++.|+++||.|||+   ++|+||||||+||
T Consensus       163 -~-~~v~~~~~-~~~~~lvmE~~~g~~L~~-l~~-----------~~~~~i~~qi~~~l~~lH~---~giiHrDlkp~NI  224 (282)
T 1zar_A          163 -G-LAVPKVYA-WEGNAVLMELIDAKELYR-VRV-----------ENPDEVLDMILEEVAKFYH---RGIVHGDLSQYNV  224 (282)
T ss_dssp             -T-SSSCCEEE-EETTEEEEECCCCEEGGG-CCC-----------SCHHHHHHHHHHHHHHHHH---TTEECSCCSTTSE
T ss_pred             -C-CCcCeEEe-ccceEEEEEecCCCcHHH-cch-----------hhHHHHHHHHHHHHHHHHH---CCCEeCCCCHHHE
Confidence             5 77777553 456799999999999988 421           2344699999999999999   9999999999999


Q ss_pred             EEcCCCcEEEEeecCcccccCCCCCcccccccCCcccCccccc
Q 048419          467 LLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTR  509 (653)
Q Consensus       467 ll~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~  509 (653)
                      |++ ++.+||+|||+++.              +..+.|||++.
T Consensus       225 Ll~-~~~vkl~DFG~a~~--------------~~~~~a~e~l~  252 (282)
T 1zar_A          225 LVS-EEGIWIIDFPQSVE--------------VGEEGWREILE  252 (282)
T ss_dssp             EEE-TTEEEECCCTTCEE--------------TTSTTHHHHHH
T ss_pred             EEE-CCcEEEEECCCCeE--------------CCCCCHHHHHH
Confidence            999 99999999999874              23578899874

>2a6z_A EMP47P (FORM2); beta sandwich, carbohydrate binding protein, cargo receptor, structural genomics, NPPSFA; 1.00A {Saccharomyces cerevisiae} SCOP: b.29.1.13 PDB: 2a70_A 2a71_A

Probab=99.78  E-value=3.2e-18  Score=166.54  Aligned_cols=189  Identities=13%  Similarity=0.111  Sum_probs=129.9

Q ss_pred             CCeEEecceEecCCCcEEecCCCCCceEEEEcCCCeecccCCCCceeeeEEEEEEEEecCCCCCCCCceEEEEecCCCCC
Q 048419           19 ANLSLEGAAYISTSGILTVTNKSEGLIGHALYPNPLRFKTSNKSVAIDFRTNFVFSILPKYPDLGGQGLAFIIISTNRPE   98 (653)
Q Consensus        19 ~~l~~~g~a~~~~~g~l~Lt~~~~~~~Gr~~y~~pi~~~~~~~~~~~sF~t~F~f~i~~~~~~~~gdGlaF~l~~~~~~~   98 (653)
                      .+..+.|+|.+. ++.|+||++ ..+.|.+|.+.|+++.+       +|+++|+|+|.... ..+||||||++++.... 
T Consensus        24 ~~W~~~G~a~i~-~~~IrLTp~-~~~~G~iWs~~p~~~~~-------~weie~~Fri~g~~-~~~gdGlA~W~t~~~~~-   92 (222)
T 2a6z_A           24 NNWQTGEQASLE-EGRIVLTSN-QNSKGSLWLKQGFDLKD-------SFTMEWTFRSVGYS-GQTDGGISFWFVQDSNI-   92 (222)
T ss_dssp             TTEEEEETCEEE-TTEEESCCS-TTCEEEEEESSCEECCS-------CEEEEEEEEEESCC-SCCSCEEEEEEEECSSS-
T ss_pred             CCcEEcccEEEc-CCEEEECCC-CCCeEEEEeCCCCCCCC-------CEEEEEEEEEeCCC-CCCCCEEEEEEECCCcc-
Confidence            589999999996 899999999 57789999999998743       59999999998753 34799999999986532 


Q ss_pred             CCCCCccccCCCcccCCCCCCCCceEEEEeecccccccCCCCCCeeeEecCCC-CcCCcccCccccCCCCcccccc-CCC
Q 048419           99 NCLANQFLGLPNITMSSSTKFSTRMLAVEFDIIQNTELIDINDNHVGIDISSL-ISSASEPASYYSGNNHRIPILL-RSG  176 (653)
Q Consensus        99 ~~~~g~~lG~~~~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~~~Hvgid~ns~-~s~~~~~~~~~~~~~~~~~~~l-~~g  176 (653)
                       ...|..+|..+.-+.         +||+|||+.|.      .++|.+.+|.= .+..... +... ..+...... ..+
T Consensus        93 -~~~g~~~G~~~~f~G---------L~I~~Dt~~n~------~p~i~~~~ndG~~~yd~~~-~~~~-~~~~C~~~~rn~~  154 (222)
T 2a6z_A           93 -PRDKQLYNGPVNYDG---------LQLLVDNNGPL------GPTLRGQLNDGQKPVDKTK-IYDQ-SFASCLMGYQDSS  154 (222)
T ss_dssp             -CCCCTBTTBCTTCEE---------EEEEEESCSTT------SSEEEEEEEESSSCCCGGG-HHHH-CSEEEECCCTTEE
T ss_pred             -cCCCcccCCCCCCCE---------EEEEEECCCCC------CceEEEEECCCCeeeccCC-Cccc-cccccceeccCCC
Confidence             134556676554333         89999998872      46777766431 1111000 0000 000111222 346


Q ss_pred             CceEEEEEec-CCceEEEEEEeeCCCCCCCCCceeeeecCCcccccc-eEEeEecccC---cccceeeecceeee
Q 048419          177 DPIQAWVDYS-SQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEY-MYTGFSASTG---LITASHNVHGWSIS  246 (653)
Q Consensus       177 ~~~~~~I~Y~-~~~~~l~v~~~~~~~~~~~~~~l~~~~dL~~~l~~~-~~vGFsastg---~~~~~~~i~sWsf~  246 (653)
                      .+.+++|.|+ .....|+|.+..      ...+-...|+    ||+. .|+||||+||   ...+.|.|++|++.
T Consensus       155 ~~~~~rI~Y~~~~~~~l~v~id~------~~C~~~~~v~----LP~~~~y~G~SA~TG~l~~~~d~hdil~~~~~  219 (222)
T 2a6z_A          155 VPSTIRVTYDLEDDNLLKVQVDN------KVCFQTRKVR----FPSGSYRIGVTAQNGAVNNNAESFEIFKMQFF  219 (222)
T ss_dssp             EEEEEEEEEEGGGTSEEEEEETT------EEEEEESCCC----CCSSEEEEEEEEECCSGGGCCCEEEEEEEEEE
T ss_pred             CcEEEEEEEEcCCCcEEEEEEcC------eEEEEeCCee----cCCCCcEEEEEEcCCCCCCCCccEEEEEEEEE
Confidence            7899999998 667789998753      1111112233    5655 4799999999   78899999999985

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.77  E-value=6.8e-19  Score=177.60  Aligned_cols=141  Identities=16%  Similarity=0.125  Sum_probs=106.4

Q ss_pred             cCcceeeeeeCcEEEEEEEeCCCCcE--EEEEEeccCchh------------------------hHHHHHHHHHHHhhcC
Q 048419          332 FGEQNLVGSGGFGRVYRGLMPSLGLE--VAIKRIGHNSQQ------------------------GMKEFVAEIMSMGRLR  385 (653)
Q Consensus       332 f~~~~~LG~G~fg~Vy~~~~~~~~~~--vavK~~~~~~~~------------------------~~~~~~~E~~~l~~l~  385 (653)
                      |...+.||+|+||.||+|.+..+|+.  ||||+++.....                        ....+.+|+..+.+++
T Consensus        49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~  128 (258)
T 1zth_A           49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK  128 (258)
T ss_dssp             EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence            56778999999999999998556888  999987543111                        1236788999999998


Q ss_pred             CCce--eeeeeeecccceeEEEEeccCC-CCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHH-hcCCCCeEecCC
Q 048419          386 HRNL--VQLHGWCRKQDELLLVYDYVPN-GSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLH-EECNQRVVHRDV  461 (653)
Q Consensus       386 H~ni--v~l~g~~~~~~~~~lV~E~~~~-gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH-~~~~~~ivH~Dl  461 (653)
                      |+++  ..++.+    +..+|||||+.+ |.+...|....    ...++.....++.|++.+|.||| +   .+|+||||
T Consensus       129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~---~givHrDl  197 (258)
T 1zth_A          129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELG----RELKELDVEGIFNDVVENVKRLYQE---AELVHADL  197 (258)
T ss_dssp             HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHG----GGGGGSCHHHHHHHHHHHHHHHHHT---SCEECSSC
T ss_pred             hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHh----hccChHHHHHHHHHHHHHHHHHHHH---CCEEeCCC
Confidence            8764  333332    356899999942 43322222211    11345678899999999999999 8   89999999


Q ss_pred             CCCcEEEcCCCcEEEEeecCcccc
Q 048419          462 KPSNILLDTYLNAKLGDFGLAKIY  485 (653)
Q Consensus       462 kp~NIll~~~~~~kl~DfGla~~~  485 (653)
                      ||+|||++.  .++|+|||++...
T Consensus       198 kp~NILl~~--~~~liDFG~a~~~  219 (258)
T 1zth_A          198 SEYNIMYID--KVYFIDMGQAVTL  219 (258)
T ss_dssp             STTSEEESS--SEEECCCTTCEET
T ss_pred             CHHHEEEcC--cEEEEECcccccC
Confidence            999999988  9999999999754

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=99.63  E-value=5.5e-16  Score=163.04  Aligned_cols=140  Identities=11%  Similarity=0.040  Sum_probs=96.6

Q ss_pred             cCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCch--------------hhHHHHHHHHHHHhhcCCCceeeeeeeec
Q 048419          332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQ--------------QGMKEFVAEIMSMGRLRHRNLVQLHGWCR  397 (653)
Q Consensus       332 f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~--------------~~~~~~~~E~~~l~~l~H~niv~l~g~~~  397 (653)
                      |++.+.||+|++|.||+|... +|+.||||+++....              ........+.++.....|+|+.+++....
T Consensus        97 Y~I~~~IG~Gk~a~VY~a~d~-~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv  175 (397)
T 4gyi_A           97 YSVGSRIGVGKESDIMIVADE-KGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGF  175 (397)
T ss_dssp             SEEEEEEEECSSEEEEEEECT-TCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             EEecCEeeeCCceEEEEEECC-CCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            888999999999999999986 589999998753210              01112222222222223344333332211


Q ss_pred             ------ccceeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCC
Q 048419          398 ------KQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTY  471 (653)
Q Consensus       398 ------~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~  471 (653)
                            .....+|||||+++++|..+..           .+....++.||+.+|.|||+   .+||||||||.|||++++
T Consensus       176 ~vp~p~~~~~~~LVME~i~G~~L~~l~~-----------~~~~~~l~~qll~~l~~lH~---~gIVHrDLKp~NILl~~d  241 (397)
T 4gyi_A          176 PVPEPIAQSRHTIVMSLVDALPMRQVSS-----------VPDPASLYADLIALILRLAK---HGLIHGDFNEFNILIREE  241 (397)
T ss_dssp             SCCCEEEEETTEEEEECCSCEEGGGCCC-----------CSCHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEEEEEE
T ss_pred             CCCeeeeccCceEEEEecCCccHhhhcc-----------cHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHHHEEEeCC
Confidence                  1122379999999888865532           12345688999999999999   899999999999999877


Q ss_pred             C----------cEEEEeecCccccc
Q 048419          472 L----------NAKLGDFGLAKIYE  486 (653)
Q Consensus       472 ~----------~~kl~DfGla~~~~  486 (653)
                      +          .+.|+||+-+....
T Consensus       242 gd~~d~~~~~~~~~iID~~Q~V~~~  266 (397)
T 4gyi_A          242 KDAEDPSSITLTPIIIXFPQMVSMD  266 (397)
T ss_dssp             ECSSCTTSEEEEEEECCCTTCEETT
T ss_pred             CCcccccccccceEEEEeCCcccCC
Confidence            6          38999999776543

>2a6v_A EMP46P; beta sandwich, carbohydrate binding protein, cargo receptor, structural genomics, NPPSFA; 1.52A {Saccharomyces cerevisiae} SCOP: b.29.1.13 PDB: 2a6w_A 2a6x_A

Probab=99.50  E-value=7.3e-13  Score=128.19  Aligned_cols=185  Identities=13%  Similarity=0.090  Sum_probs=121.5

Q ss_pred             CCeEEecceEecCCCcEEecCCCCCceEEEEcCCCeecccCCCCceeeeEEEEEEEEecCCCCCCCCceEEEEecCCCCC
Q 048419           19 ANLSLEGAAYISTSGILTVTNKSEGLIGHALYPNPLRFKTSNKSVAIDFRTNFVFSILPKYPDLGGQGLAFIIISTNRPE   98 (653)
Q Consensus        19 ~~l~~~g~a~~~~~g~l~Lt~~~~~~~Gr~~y~~pi~~~~~~~~~~~sF~t~F~f~i~~~~~~~~gdGlaF~l~~~~~~~   98 (653)
                      ....+.|+|.+. ++.|+||++ .++.|.+|-+.|+.+-       .+|+.+|+|+|...... +||||||.++..... 
T Consensus        27 ~~W~~~G~t~v~-~~~IrLTp~-~s~~G~lWs~~p~~~~-------~~weiev~Fri~G~~~~-~gdGlA~Wyt~~~~~-   95 (226)
T 2a6v_A           27 SQWTLGDKVKLE-EGRFVLTPG-KNTKGSLWLKPEYSIK-------DAMTIEWTFRSFGFRGS-TKGGLAFWLKQGNEG-   95 (226)
T ss_dssp             TTEEEEETCEEE-TTEEESCCS-TTCEEEEEESSCBCCS-------SCEEEEEEEEEESCCSC-CSCEEEEEEECSCCC-
T ss_pred             CCcEEcCCeEEe-CCEEEECCC-CCceEEEeeCCCCCCC-------CCeEEEEEEEEecCCCC-CCCEEEEEEECCCCC-
Confidence            478999999986 778999999 9999999999999962       25999999999876432 799999999965431 


Q ss_pred             CCCCCcccc-CCCcccCCCCCCCCceEEEEeecccccccCCCCCCeeeEecC-CCCcCCcccCccccCCCCcccccc-CC
Q 048419           99 NCLANQFLG-LPNITMSSSTKFSTRMLAVEFDIIQNTELIDINDNHVGIDIS-SLISSASEPASYYSGNNHRIPILL-RS  175 (653)
Q Consensus        99 ~~~~g~~lG-~~~~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~~~Hvgid~n-s~~s~~~~~~~~~~~~~~~~~~~l-~~  175 (653)
                        ..|...| ..+.-+.         +||.|||+.|.      .+.|.+-+| +-.+..... .   ...+...... ..
T Consensus        96 --~~g~vfGg~~d~f~G---------lgI~~Dt~~n~------~p~i~~~~NDGt~~yd~~~-~---~~~g~C~~~~rn~  154 (226)
T 2a6v_A           96 --DSTELFGGSSKKFNG---------LMILLRLDDKL------GESVTAYLNDGTKDLDIES-S---PYFASCLFQYQDS  154 (226)
T ss_dssp             --CCCTBTTTBCSSCEE---------EEEEEEEETTT------EEEEEEEEEESSSCCCTTT-S---CCSEEEECCCSSC
T ss_pred             --CCcccccccCCCccE---------EEEEEECCCCC------CceEEEEECCCCcccCCCC-C---cccceEeEeccCC
Confidence              1223332 1111111         89999998872      233444432 222111110 0   0001111222 45


Q ss_pred             CCceEEEEEec-CCceEEEEEEeeCCCCCCCCCcee-eeecCCcccccce--EEeEecccCcccceeeecceeee
Q 048419          176 GDPIQAWVDYS-SQEMLINVSICPLGVPKPYRPLIS-LPIDLSSVIDEYM--YTGFSASTGLITASHNVHGWSIS  246 (653)
Q Consensus       176 g~~~~~~I~Y~-~~~~~l~v~~~~~~~~~~~~~~l~-~~~dL~~~l~~~~--~vGFsastg~~~~~~~i~sWsf~  246 (653)
                      +.+.+++|.|. ...+.|+|.+..      . ..+. ..|+    ||..-  |+||||+||...+.|.|++-.+-
T Consensus       155 ~~~t~~ri~Y~~~~~~~l~v~id~------~-~Cf~~~~v~----LP~g~~~yfGiSAaTg~~~D~hdils~~~~  218 (226)
T 2a6v_A          155 MVPSTLRLTYNPLDNHLLKLQMDN------R-VCFQTRKVK----FMGSSPFRIGTSAINDASKESFEILKMKLY  218 (226)
T ss_dssp             SSCEEEEEEEEGGGTSEEEEEETT------E-EEEEESCCC----GGGTSCBEEEEEEECCTTCCEEEEEEEEEE
T ss_pred             CCCEEEEEEEEccCCCEEEEEEcC------C-eeEEECCee----cCCCCccEEEEEEcCCCCcccEEEEEEEEE
Confidence            68899999997 456789998752      1 1221 1122    45544  99999999999999999987664

>2ltn_B PEA lectin, beta chain; 1.70A {Pisum sativum} SCOP: b.29.1.1 PDB: 1hkd_B 1rin_B* 1ofs_B* 1bqp_B* 1loe_B 1loa_B* 1loc_B* 1lod_B* 1lob_B 1lof_B* 1log_B* 1lof_D* 1les_B* 2b7y_B* 1lgc_B* 1lgb_B* 1len_B 1lem_B 2lal_B

Probab=99.47  E-value=9e-15  Score=105.92  Aligned_cols=44  Identities=34%  Similarity=0.463  Sum_probs=41.1

Q ss_pred             CCceeeeecCCcccccceEEeEecccCcccceeeecceeeeecC
Q 048419          206 RPLISLPIDLSSVIDEYMYTGFSASTGLITASHNVHGWSISIGG  249 (653)
Q Consensus       206 ~~~l~~~~dL~~~l~~~~~vGFsastg~~~~~~~i~sWsf~~~~  249 (653)
                      +|+|+.++||+++|+|+|||||||+||...|.|+|++|+|+...
T Consensus         3 ~p~ls~~vdLs~~l~e~v~VGFSAsTG~~~~~h~IlsWsF~s~~   46 (52)
T 2ltn_B            3 SYTLSDVVSLKDVVPEWVRIGFSATTGAEYAAHEVLSWSFHSEL   46 (52)
T ss_dssp             EEEEEEECCHHHHSCSEEEEEEEEECCSSCCEEEEEEEEEEEEE
T ss_pred             eeeEEEEEcHHHhcCceEEEEEEeccCCcceeEEEEEeEEEeec
Confidence            46899999999999999999999999999999999999998754

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=99.27  E-value=1.5e-11  Score=123.77  Aligned_cols=147  Identities=13%  Similarity=0.013  Sum_probs=114.0

Q ss_pred             HHhhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcC-CCceeeeeeeecccceeEE
Q 048419          326 ASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLR-HRNLVQLHGWCRKQDELLL  404 (653)
Q Consensus       326 ~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~l  404 (653)
                      ...-.+|.....++.|+.+.||++...  +..+++|+...........+.+|+.+++.+. +..+.++++++...+..++
T Consensus        10 ~~~l~~~~~~~~~~g~s~~~v~~~~~~--~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~l   87 (263)
T 3tm0_A           10 KKLIEKYRCVKDTEGMSPAKVYKLVGE--NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNL   87 (263)
T ss_dssp             HHHHTTSEEEECCSCCSSSEEEEEECS--SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEE
T ss_pred             HHHhccceeEeeccCCCCCeEEEEECC--CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEE
Confidence            344467877888898999999999754  6789999986432222345788999999985 6778889999988888999


Q ss_pred             EEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcC--------------------------------
Q 048419          405 VYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEEC--------------------------------  452 (653)
Q Consensus       405 V~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~--------------------------------  452 (653)
                      ||||++|.+|.+.+.          +......++.+++++|..||+..                                
T Consensus        88 v~e~i~G~~l~~~~~----------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (263)
T 3tm0_A           88 LMSEADGVLCSEEYE----------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCEN  157 (263)
T ss_dssp             EEECCSSEEHHHHCC----------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGG
T ss_pred             EEEecCCeehhhccC----------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccccc
Confidence            999999998876531          12234578899999999999811                                


Q ss_pred             ------------------------CCCeEecCCCCCcEEEcCCCcEEEEeecCccc
Q 048419          453 ------------------------NQRVVHRDVKPSNILLDTYLNAKLGDFGLAKI  484 (653)
Q Consensus       453 ------------------------~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~  484 (653)
                                              ...++|+|++|.|||++++..+.|+||+.+..
T Consensus       158 ~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~  213 (263)
T 3tm0_A          158 WEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR  213 (263)
T ss_dssp             GSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred             ccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhccc
Confidence                                    14589999999999998766667999987753

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=99.09  E-value=1.1e-10  Score=116.75  Aligned_cols=138  Identities=15%  Similarity=0.056  Sum_probs=98.5

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCc--eeeeeeeecccceeEEEEe
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRN--LVQLHGWCRKQDELLLVYD  407 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n--iv~l~g~~~~~~~~~lV~E  407 (653)
                      .++....+.+.|..+.||++... +|..+++|.....   ....+..|+.+++.+.+.+  +.+++++....+..++|||
T Consensus        20 ~~~~~~~~~~gg~~~~v~~~~~~-~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e   95 (264)
T 1nd4_A           20 FGYDWAQQTIGCSDAAVFRLSAQ-GRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLG   95 (264)
T ss_dssp             TTCEEEECSCTTSSCEEEEEECT-TSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEE
T ss_pred             CCCceEecccCCCCceEEEEecC-CCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEE
Confidence            34443333335556999999764 4678999997543   2245778999999986545  4558888887778999999


Q ss_pred             ccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcC-----------------------------------
Q 048419          408 YVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEEC-----------------------------------  452 (653)
Q Consensus       408 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~-----------------------------------  452 (653)
                      |++|.+|.  ....           ....++.++++.|..||+..                                   
T Consensus        96 ~i~G~~l~--~~~~-----------~~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (264)
T 1nd4_A           96 EVPGQDLL--SSHL-----------APAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEH  162 (264)
T ss_dssp             CCSSEETT--TSCC-----------CHHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGG
T ss_pred             ecCCcccC--cCcC-----------CHhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhc
Confidence            99998884  2110           12256677777777777632                                   


Q ss_pred             --------------------CCCeEecCCCCCcEEEcCCCcEEEEeecCccc
Q 048419          453 --------------------NQRVVHRDVKPSNILLDTYLNAKLGDFGLAKI  484 (653)
Q Consensus       453 --------------------~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~  484 (653)
                                          ...++|+|++|.||+++++..+.|+||+.+..
T Consensus       163 ~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~  214 (264)
T 1nd4_A          163 QGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV  214 (264)
T ss_dssp             TTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             cCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence                                12399999999999998876677999998753

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=98.97  E-value=2.1e-09  Score=113.19  Aligned_cols=142  Identities=13%  Similarity=0.188  Sum_probs=107.0

Q ss_pred             cceeeeeeCcEEEEEEEeCCCCcEEEEEEec--cCc-hhhHHHHHHHHHHHhhcC--CCceeeeeeeeccc---ceeEEE
Q 048419          334 EQNLVGSGGFGRVYRGLMPSLGLEVAIKRIG--HNS-QQGMKEFVAEIMSMGRLR--HRNLVQLHGWCRKQ---DELLLV  405 (653)
Q Consensus       334 ~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~--~~~-~~~~~~~~~E~~~l~~l~--H~niv~l~g~~~~~---~~~~lV  405 (653)
                      ..+.|+.|.++.||+....  +..+++|+..  ... ......+.+|+.+++.|.  +..+.+++.++.+.   +..++|
T Consensus        42 ~~~~l~~G~sn~~y~v~~~--~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~v  119 (359)
T 3dxp_A           42 SVEQFKGGQSNPTFKLVTP--GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYI  119 (359)
T ss_dssp             EEEECCC-CCSCEEEEECS--SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEE
T ss_pred             eEEEcCCcccceEEEEEEC--CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEE
Confidence            3567999999999998875  4678899875  322 122356788999999997  45678899988776   458999


Q ss_pred             EeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcC---------------------------------
Q 048419          406 YDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEEC---------------------------------  452 (653)
Q Consensus       406 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~---------------------------------  452 (653)
                      |||++|..+.+..       ...++..++..++.++++.|..||+..                                 
T Consensus       120 me~v~G~~l~~~~-------~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (359)
T 3dxp_A          120 MEFVSGRVLWDQS-------LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETE  192 (359)
T ss_dssp             EECCCCBCCCCTT-------CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCS
T ss_pred             EEecCCeecCCCc-------cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCc
Confidence            9999998885422       122667788899999999999999731                                 


Q ss_pred             ----------------------CCCeEecCCCCCcEEEcCCCc--EEEEeecCccc
Q 048419          453 ----------------------NQRVVHRDVKPSNILLDTYLN--AKLGDFGLAKI  484 (653)
Q Consensus       453 ----------------------~~~ivH~Dlkp~NIll~~~~~--~kl~DfGla~~  484 (653)
                                            ...++|+|+++.|||++.++.  +.|+||+.+..
T Consensus       193 ~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~  248 (359)
T 3dxp_A          193 SIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL  248 (359)
T ss_dssp             CCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred             CChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence                                  257999999999999987753  68999999875

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=98.84  E-value=1.7e-09  Score=111.12  Aligned_cols=185  Identities=17%  Similarity=0.177  Sum_probs=121.6

Q ss_pred             ceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcC-CCc--eeeeeeeecccc---eeEEEEec
Q 048419          335 QNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLR-HRN--LVQLHGWCRKQD---ELLLVYDY  408 (653)
Q Consensus       335 ~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~n--iv~l~g~~~~~~---~~~lV~E~  408 (653)
                      .+.++.|....||+..     ..+++|+...  ......+.+|...++.+. +..  +.+++..+...+   ..++|||+
T Consensus        25 i~~~~~G~~n~v~~v~-----~~~vlR~~~~--~~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~   97 (304)
T 3sg8_A           25 IEISGEGNDCIAYEIN-----RDFIFKFPKH--SRGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTK   97 (304)
T ss_dssp             CCEEEECSSEEEEEST-----TSEEEEEESS--HHHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEEC
T ss_pred             eEecCCCCcceEEEEC-----CEEEEEecCC--cchHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcc
Confidence            4569999999999852     4588998642  234567889999999884 322  445555544433   34889999


Q ss_pred             cCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhc-------------------------------------
Q 048419          409 VPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEE-------------------------------------  451 (653)
Q Consensus       409 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~-------------------------------------  451 (653)
                      ++|.+|.....       ..++..++..++.++++.|..||+.                                     
T Consensus        98 i~G~~l~~~~~-------~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (304)
T 3sg8_A           98 IKGVPLTPLLL-------NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQM  170 (304)
T ss_dssp             CCCEECCHHHH-------HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHH
T ss_pred             cCCeECCcccc-------ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccH
Confidence            99988865332       2256667778888888888888851                                     


Q ss_pred             ------------------CCCCeEecCCCCCcEEEcC--CCcEEEEeecCcccccCCCCCcccccc--------------
Q 048419          452 ------------------CNQRVVHRDVKPSNILLDT--YLNAKLGDFGLAKIYEHGANPQTTHIV--------------  497 (653)
Q Consensus       452 ------------------~~~~ivH~Dlkp~NIll~~--~~~~kl~DfGla~~~~~~~~~~~~~~~--------------  497 (653)
                                        ....++|+|++|.||++++  ...+.|+||+.+..-....  ......              
T Consensus       171 ~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~--Dl~~~~~~~~~~~~~~~~~~  248 (304)
T 3sg8_A          171 KKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDN--DFISLMEDDEEYGMEFVSKI  248 (304)
T ss_dssp             HHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTH--HHHTTCCTTTSCCHHHHHHH
T ss_pred             HHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHH--HHHHHHhhccccCHHHHHHH
Confidence                              1145899999999999988  5568899999987532210  000000              


Q ss_pred             -cCCcccC-ccccccCCCCCccceeehHHHHHHHHhCCCCCC
Q 048419          498 -GTLGYLA-PELTRTGKATTSTDVYSYGILMLEVACGRRSIE  537 (653)
Q Consensus       498 -gt~~y~a-PE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~  537 (653)
                       ...+... |+...  +.....+.|+++.+++++.+|..++.
T Consensus       249 l~~Y~~~~~~~~~~--r~~~~~~~~~l~~~~~~~~~g~~~~~  288 (304)
T 3sg8_A          249 LNHYKHKDIPTVLE--KYRMKEKYWSFEKIIYGKEYGYMDWY  288 (304)
T ss_dssp             HHHHTCSCHHHHHH--HHHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred             HHHcCCCCcHHHHH--HHHHHHHHHHHHHHHHHHHcCCHHHH
Confidence             0001111 22211  11223689999999999999987654

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=98.39  E-value=2.5e-06  Score=85.58  Aligned_cols=136  Identities=21%  Similarity=0.187  Sum_probs=98.1

Q ss_pred             eeeeeCcE-EEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcC-CCceeeeeeeecccceeEEEEeccCCCCc
Q 048419          337 LVGSGGFG-RVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLR-HRNLVQLHGWCRKQDELLLVYDYVPNGSL  414 (653)
Q Consensus       337 ~LG~G~fg-~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lV~E~~~~gsL  414 (653)
                      .+..|..+ .||+......+..+++|+-...   ....+..|...|+.|. +--+.++++++.+.+..++|||+++|.++
T Consensus        31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~  107 (272)
T 4gkh_A           31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTA  107 (272)
T ss_dssp             EEECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEH
T ss_pred             EccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccc
Confidence            44555554 7999887766788999986432   3456788999998884 33467788999888899999999999887


Q ss_pred             hhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhc-------------------------------------------
Q 048419          415 DKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEE-------------------------------------------  451 (653)
Q Consensus       415 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~-------------------------------------------  451 (653)
                      .+.....         ......+..+++..|.-||..                                           
T Consensus       108 ~~~~~~~---------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (272)
T 4gkh_A          108 FQVLEEY---------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQ  178 (272)
T ss_dssp             HHHHHHC---------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHH
T ss_pred             cccccCC---------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHH
Confidence            6654321         123344566666666666631                                           


Q ss_pred             ------------CCCCeEecCCCCCcEEEcCCCcEEEEeecCccc
Q 048419          452 ------------CNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKI  484 (653)
Q Consensus       452 ------------~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~  484 (653)
                                  ....++|+|+.+.|||++.++.+-|+||+.+..
T Consensus       179 ~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~  223 (272)
T 4gkh_A          179 VWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI  223 (272)
T ss_dssp             HHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred             HHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence                        012379999999999999877777999998763

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=98.37  E-value=2.6e-06  Score=87.34  Aligned_cols=136  Identities=21%  Similarity=0.186  Sum_probs=92.0

Q ss_pred             ceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCC---ceeeeeeeec-ccceeEEEEeccC
Q 048419          335 QNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHR---NLVQLHGWCR-KQDELLLVYDYVP  410 (653)
Q Consensus       335 ~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~---niv~l~g~~~-~~~~~~lV~E~~~  410 (653)
                      .+.++.|....||+.     +..+++|+..  .......+..|..+|+.|.+.   .+.+++.++. ..+..++||||++
T Consensus        24 v~~l~~G~~n~v~~v-----g~~~VlR~~~--~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~   96 (306)
T 3tdw_A           24 VESLGEGFRNYAILV-----NGDWVFRFPK--SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQ   96 (306)
T ss_dssp             EEEEEECSSEEEEEE-----TTTEEEEEES--SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCC
T ss_pred             eeecCCCcceeEEEE-----CCEEEEEecC--CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccC
Confidence            467888888999987     4568888852  233456788999999999753   3556666664 4456789999999


Q ss_pred             CCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhc---------------------------------------
Q 048419          411 NGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEE---------------------------------------  451 (653)
Q Consensus       411 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~---------------------------------------  451 (653)
                      |..|.+....       .++..++..++.++++.|..||+.                                       
T Consensus        97 G~~l~~~~~~-------~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~  169 (306)
T 3tdw_A           97 GQILGEDGMA-------VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLR  169 (306)
T ss_dssp             SEECHHHHHT-------TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHH
T ss_pred             CeECchhhhh-------hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhH
Confidence            9888653211       122333334444444444444431                                       


Q ss_pred             ------------------CCCCeEecCCCCCcEEEcC---CCc-EEEEeecCccc
Q 048419          452 ------------------CNQRVVHRDVKPSNILLDT---YLN-AKLGDFGLAKI  484 (653)
Q Consensus       452 ------------------~~~~ivH~Dlkp~NIll~~---~~~-~kl~DfGla~~  484 (653)
                                        ....++|+|++|.||+++.   ++. +.|+||+.+..
T Consensus       170 ~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~  224 (306)
T 3tdw_A          170 DYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI  224 (306)
T ss_dssp             HHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred             HHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence                              2346799999999999987   455 48999998764

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=98.03  E-value=7e-06  Score=85.90  Aligned_cols=82  Identities=6%  Similarity=-0.044  Sum_probs=56.1

Q ss_pred             ceee-eeeCcEEEEEEEeC---C---CCcEEEEEEeccCc---hhhHHHHHHHHHHHhhcCC---Cceeeeeeeeccc--
Q 048419          335 QNLV-GSGGFGRVYRGLMP---S---LGLEVAIKRIGHNS---QQGMKEFVAEIMSMGRLRH---RNLVQLHGWCRKQ--  399 (653)
Q Consensus       335 ~~~L-G~G~fg~Vy~~~~~---~---~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H---~niv~l~g~~~~~--  399 (653)
                      .+.| +.|....+|+....   +   ++..+++|......   ......+..|+.+++.|..   -.+.+++.++.+.  
T Consensus        25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~  104 (357)
T 3ats_A           25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV  104 (357)
T ss_dssp             EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred             EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence            4567 78888999988753   1   15678899864322   0012456788888888843   3567788887665  


Q ss_pred             -ceeEEEEeccCCCCchh
Q 048419          400 -DELLLVYDYVPNGSLDK  416 (653)
Q Consensus       400 -~~~~lV~E~~~~gsL~~  416 (653)
                       +..++||||++|..+.+
T Consensus       105 ~g~~~~v~e~l~G~~l~~  122 (357)
T 3ats_A          105 LGTPFFLMDYVEGVVPPD  122 (357)
T ss_dssp             TSSCEEEEECCCCBCCCB
T ss_pred             cCCceEEEEecCCCChhh
Confidence             35689999999887764

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=97.94  E-value=1.3e-05  Score=85.22  Aligned_cols=76  Identities=11%  Similarity=0.044  Sum_probs=49.5

Q ss_pred             ceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCch-------hhHHHHHHHHHHHhhcCC--Cc-eeeeeeeecccceeEE
Q 048419          335 QNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQ-------QGMKEFVAEIMSMGRLRH--RN-LVQLHGWCRKQDELLL  404 (653)
Q Consensus       335 ~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-------~~~~~~~~E~~~l~~l~H--~n-iv~l~g~~~~~~~~~l  404 (653)
                      .+.||.|..+.||++....++..++||.......       ...+.+..|.++++.+..  +. +.+++.+.  .+..++
T Consensus        35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~d--~~~~~l  112 (397)
T 2olc_A           35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD--TEMAVT  112 (397)
T ss_dssp             EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEE--TTTTEE
T ss_pred             EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEEc--CCccEE
Confidence            5679999999999998765578899998643211       123456778888888742  33 44555443  344689


Q ss_pred             EEeccCCC
Q 048419          405 VYDYVPNG  412 (653)
Q Consensus       405 V~E~~~~g  412 (653)
                      |||++++.
T Consensus       113 vmE~l~g~  120 (397)
T 2olc_A          113 VMEDLSHL  120 (397)
T ss_dssp             EECCCTTS
T ss_pred             EEEeCCCc
Confidence            99999764

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=97.83  E-value=0.00014  Score=75.22  Aligned_cols=144  Identities=16%  Similarity=0.185  Sum_probs=80.8

Q ss_pred             ceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCC--Cceeeeeee------ecccceeEEEE
Q 048419          335 QNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRH--RNLVQLHGW------CRKQDELLLVY  406 (653)
Q Consensus       335 ~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H--~niv~l~g~------~~~~~~~~lV~  406 (653)
                      .+.|+.|..+.||+....  +..+++|+.... .   ..+..|..+++.|..  -.+.+++..      ....+..+++|
T Consensus        37 ~~~l~gG~~n~~~~v~~~--~~~~vlk~~~~~-~---~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~  110 (346)
T 2q83_A           37 IDVIQGNQMALVWKVHTD--SGAVCLKRIHRP-E---KKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVY  110 (346)
T ss_dssp             EEECC----CEEEEEEET--TEEEEEEEECSC-H---HHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEE
T ss_pred             eeeccccccCcEEEEEeC--CCCEEEEecCCC-H---HHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEE
Confidence            345666778899998874  345999998652 2   233345555555531  123334431      12355679999


Q ss_pred             eccCCCCchh--------------hhhcccccc---------cccchhhhH-----------------------------
Q 048419          407 DYVPNGSLDK--------------LLFDKDHKL---------RKLLTWDQR-----------------------------  434 (653)
Q Consensus       407 E~~~~gsL~~--------------~l~~~~~~~---------~~~l~~~~~-----------------------------  434 (653)
                      ||++|..+..              .++......         ...-.|...                             
T Consensus       111 ~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  190 (346)
T 2q83_A          111 DWIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQ  190 (346)
T ss_dssp             ECCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHH
T ss_pred             EeecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHH
Confidence            9999876531              111111000         000112111                             


Q ss_pred             --HHHHHHHHHHHHHHHh----------cCCCCeEecCCCCCcEEEcCCCcEEEEeecCccc
Q 048419          435 --YKILIGIAQSLLYLHE----------ECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKI  484 (653)
Q Consensus       435 --~~i~~~ia~~L~yLH~----------~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~  484 (653)
                        ..+..++..++.+|++          .....++|+|+++.|||++.++.+.|+||+.+..
T Consensus       191 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~  252 (346)
T 2q83_A          191 EIDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSF  252 (346)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred             HHHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence              0111223445666653          1247899999999999998888999999997753

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=97.38  E-value=0.00063  Score=68.67  Aligned_cols=80  Identities=18%  Similarity=0.217  Sum_probs=57.2

Q ss_pred             CcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCC---ceeeeeeeecccceeEEEEe
Q 048419          331 GFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHR---NLVQLHGWCRKQDELLLVYD  407 (653)
Q Consensus       331 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~---niv~l~g~~~~~~~~~lV~E  407 (653)
                      .....+.+|.|..+.||+.... +|+.|.+|+...........|..|...|+.|.-.   .+.+++++.    .-++|||
T Consensus        16 ~v~~v~~~g~G~~~~vyrv~l~-DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e   90 (288)
T 3f7w_A           16 EVAAVAERGHSHRWHLYRVELA-DGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAME   90 (288)
T ss_dssp             CEEEEEEEEEETTEEEEEEEET-TSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEE
T ss_pred             CeEEEEecCCCCCeEEEEEEEC-CCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEE
Confidence            3455778999999999999986 4889999987554443345678899999888422   344555543    2478999


Q ss_pred             ccCCCCch
Q 048419          408 YVPNGSLD  415 (653)
Q Consensus       408 ~~~~gsL~  415 (653)
                      |++++...
T Consensus        91 ~l~~~~~~   98 (288)
T 3f7w_A           91 WVDERPPT   98 (288)
T ss_dssp             CCCCCCCC
T ss_pred             eecccCCC
Confidence            99876543

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=97.35  E-value=0.00039  Score=74.37  Aligned_cols=77  Identities=12%  Similarity=0.097  Sum_probs=46.7

Q ss_pred             CCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCCCCccccccc--CCcccCccccccC---CCCCccceeehHHHHH
Q 048419          453 NQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVG--TLGYLAPELTRTG---KATTSTDVYSYGILML  527 (653)
Q Consensus       453 ~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~g--t~~y~aPE~~~~~---~~~~ksDV~s~Gvvl~  527 (653)
                      ...++|+|++|.|||++.++ ++|+||+.+..-....  .......  ...|++|+.....   ......++......+|
T Consensus       231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~--Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  307 (420)
T 2pyw_A          231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGF--DIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTW  307 (420)
T ss_dssp             CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHH--HHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHH
T ss_pred             CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHH--HHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHH
Confidence            37899999999999998776 9999999887532110  0000010  1346666654311   1112344556777777


Q ss_pred             HHHhC
Q 048419          528 EVACG  532 (653)
Q Consensus       528 elltG  532 (653)
                      +..++
T Consensus       308 ~~y~~  312 (420)
T 2pyw_A          308 NLFNK  312 (420)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            77655

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=97.35  E-value=0.0019  Score=65.93  Aligned_cols=76  Identities=16%  Similarity=0.073  Sum_probs=60.6

Q ss_pred             cceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcC---CCceeeeeeeecccceeEEEEeccC
Q 048419          334 EQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLR---HRNLVQLHGWCRKQDELLLVYDYVP  410 (653)
Q Consensus       334 ~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---H~niv~l~g~~~~~~~~~lV~E~~~  410 (653)
                      ..+.|+.|....+|+....  +..+++|+....   ....+..|...|+.|.   ...+.+++.++...+..++||||++
T Consensus        40 ~~~~l~gG~~n~~y~v~~~--~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~  114 (312)
T 3jr1_A           40 HKEKLYSGEMNEIWLINDE--VQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALN  114 (312)
T ss_dssp             EEEEECCSSSSEEEEEESS--SCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCC
T ss_pred             eeEEeCCccceeeeEEEEC--CCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEecc
Confidence            3567899999999998763  678899987532   3566788999888884   3568888888887888999999999


Q ss_pred             CCCc
Q 048419          411 NGSL  414 (653)
Q Consensus       411 ~gsL  414 (653)
                      +..+
T Consensus       115 G~~~  118 (312)
T 3jr1_A          115 KSKN  118 (312)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            8876

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=97.25  E-value=0.0015  Score=66.90  Aligned_cols=161  Identities=12%  Similarity=0.049  Sum_probs=88.9

Q ss_pred             cCHHHHHHhhcCcCc-----ceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCc--eeee
Q 048419          320 FKYAELASVTKGFGE-----QNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRN--LVQL  392 (653)
Q Consensus       320 f~~~el~~at~~f~~-----~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n--iv~l  392 (653)
                      ++.+++..+-..|..     .+.|+.|....+|+....+ | .+++|......  ..+.+..|+.++..|....  +.++
T Consensus         7 ~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~-g-~~vlk~~~~~~--~~~~l~~e~~~l~~L~~~g~~vP~~   82 (322)
T 2ppq_A            7 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTK-D-PLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPLP   82 (322)
T ss_dssp             CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESS-C-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCB
T ss_pred             CCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCC-c-cEEEEEeCCCC--CHHHHHHHHHHHHHHHHCCCCCCcc
Confidence            445555555555543     3456678888999988753 3 68899886521  1224456777777764222  2333


Q ss_pred             eeee------cccceeEEEEeccCCCCchhh--------------hhcccccc-------cccchhhhHHH---------
Q 048419          393 HGWC------RKQDELLLVYDYVPNGSLDKL--------------LFDKDHKL-------RKLLTWDQRYK---------  436 (653)
Q Consensus       393 ~g~~------~~~~~~~lV~E~~~~gsL~~~--------------l~~~~~~~-------~~~l~~~~~~~---------  436 (653)
                      +...      ...+..+++++|++|..+...              ++......       .....|...+.         
T Consensus        83 ~~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~  162 (322)
T 2ppq_A           83 LPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEV  162 (322)
T ss_dssp             CCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGT
T ss_pred             cCCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhh
Confidence            3221      123457899999998765321              11110000       01112332111         


Q ss_pred             ---HHHHHHHHHHHHHhc----CCCCeEecCCCCCcEEEcCCCcEEEEeecCccc
Q 048419          437 ---ILIGIAQSLLYLHEE----CNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKI  484 (653)
Q Consensus       437 ---i~~~ia~~L~yLH~~----~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~  484 (653)
                         +...+...+..+++.    ....++|+|+.+.|||++++..+.|+||+.+..
T Consensus       163 ~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~  217 (322)
T 2ppq_A          163 EKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN  217 (322)
T ss_dssp             STTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             hhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence               111244555666543    235799999999999998876668999987753

>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8

Probab=97.19  E-value=0.0012  Score=70.76  Aligned_cols=75  Identities=17%  Similarity=0.171  Sum_probs=51.1

Q ss_pred             ceeeeeeCcEEEEEEEeCC-------CCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCce-eeeeeeecccceeEEEE
Q 048419          335 QNLVGSGGFGRVYRGLMPS-------LGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNL-VQLHGWCRKQDELLLVY  406 (653)
Q Consensus       335 ~~~LG~G~fg~Vy~~~~~~-------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~g~~~~~~~~~lV~  406 (653)
                      .+.|+.|-...+|++...+       .+..+++|+.....  ..+.+..|..+++.|...++ .++++.+.+    .+|+
T Consensus        78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~--~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~  151 (429)
T 1nw1_A           78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE--TESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLE  151 (429)
T ss_dssp             EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCC--CHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEE
T ss_pred             EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCC--cHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEE
Confidence            4578888889999998753       25789999884321  12455579888888854444 566666543    2899


Q ss_pred             eccCCCCch
Q 048419          407 DYVPNGSLD  415 (653)
Q Consensus       407 E~~~~gsL~  415 (653)
                      ||++|.+|.
T Consensus       152 e~l~G~~l~  160 (429)
T 1nw1_A          152 EYIPSRPLS  160 (429)
T ss_dssp             CCCCEEECC
T ss_pred             EEeCCcccC
Confidence            999875553

>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}

Probab=97.08  E-value=0.0027  Score=68.50  Aligned_cols=76  Identities=11%  Similarity=0.033  Sum_probs=49.3

Q ss_pred             ceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCce-eeeeeeecccceeEEEEeccCCCC
Q 048419          335 QNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNL-VQLHGWCRKQDELLLVYDYVPNGS  413 (653)
Q Consensus       335 ~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~g~~~~~~~~~lV~E~~~~gs  413 (653)
                      .+.|+.|-...+|+....+.+..+++|+........ -....|..+++.|...++ .++++.+.  +  .+|+||++|.+
T Consensus       113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~-idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~~  187 (458)
T 2qg7_A          113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEI-INREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGYA  187 (458)
T ss_dssp             EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCSC-SCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSEE
T ss_pred             EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhhh-cCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCcc
Confidence            467888888999999886445789999874432111 112578888888865554 46777663  2  25999998865


Q ss_pred             ch
Q 048419          414 LD  415 (653)
Q Consensus       414 L~  415 (653)
                      |.
T Consensus       188 l~  189 (458)
T 2qg7_A          188 LS  189 (458)
T ss_dssp             CC
T ss_pred             CC
Confidence            53

>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*

Probab=97.07  E-value=0.002  Score=67.72  Aligned_cols=145  Identities=22%  Similarity=0.241  Sum_probs=85.2

Q ss_pred             ceeeeeeCcEEEEEEEeCC-------CCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCc-eeeeeeeecccceeEEEE
Q 048419          335 QNLVGSGGFGRVYRGLMPS-------LGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRN-LVQLHGWCRKQDELLLVY  406 (653)
Q Consensus       335 ~~~LG~G~fg~Vy~~~~~~-------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n-iv~l~g~~~~~~~~~lV~  406 (653)
                      .+.|..|-...+|++...+       .+..+.+|+.... ......+.+|..+++.|.-.+ ..++++.+.+.    +||
T Consensus        55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~g----~v~  129 (379)
T 3feg_A           55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFPEG----RLE  129 (379)
T ss_dssp             CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETTE----EEE
T ss_pred             EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCCc----cEE
Confidence            4567777778899988742       3578999986332 223456668999888885322 35667666542    899


Q ss_pred             eccCCCCchhh-h----------------hccccccc-ccc-hhhhHHHHHHHHHH-------------------HHHHH
Q 048419          407 DYVPNGSLDKL-L----------------FDKDHKLR-KLL-TWDQRYKILIGIAQ-------------------SLLYL  448 (653)
Q Consensus       407 E~~~~gsL~~~-l----------------~~~~~~~~-~~l-~~~~~~~i~~~ia~-------------------~L~yL  448 (653)
                      ||++|..|..- +                +....... .+. -|.++.++..++..                   .+..|
T Consensus       130 e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L  209 (379)
T 3feg_A          130 QYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNL  209 (379)
T ss_dssp             ECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHH
T ss_pred             EEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHH
Confidence            99998666421 1                11110001 111 34555555544322                   23333


Q ss_pred             Hh-----cCCCCeEecCCCCCcEEEcCC----CcEEEEeecCccc
Q 048419          449 HE-----ECNQRVVHRDVKPSNILLDTY----LNAKLGDFGLAKI  484 (653)
Q Consensus       449 H~-----~~~~~ivH~Dlkp~NIll~~~----~~~kl~DfGla~~  484 (653)
                      .+     .....++|+|+.+.||+++.+    +.+.|+||..+..
T Consensus       210 ~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~  254 (379)
T 3feg_A          210 RKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY  254 (379)
T ss_dssp             HHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred             HHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence            22     123569999999999999876    7899999998864

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=96.95  E-value=0.0023  Score=64.95  Aligned_cols=72  Identities=10%  Similarity=0.089  Sum_probs=44.9

Q ss_pred             ceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCce-eeeeeeecccceeEEEEecc-CCC
Q 048419          335 QNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNL-VQLHGWCRKQDELLLVYDYV-PNG  412 (653)
Q Consensus       335 ~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~g~~~~~~~~~lV~E~~-~~g  412 (653)
                      .+.|+.|....+|+.      ..+++|+....... .-...+|+..++.+....+ .++++++.+.  -++++||+ ++.
T Consensus        23 i~~l~gG~tN~~~~~------~~~vlR~~~~~~~~-~~~r~~E~~~l~~l~~~g~~P~~~~~~~~~--~~~v~e~i~~g~   93 (301)
T 3dxq_A           23 PLERLGGLTNLVFRA------GDLCLRIPGKGTEE-YINRANEAVAAREAAKAGVSPEVLHVDPAT--GVMVTRYIAGAQ   93 (301)
T ss_dssp             CEEEESCSSEEEEEE------TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEECTTT--CCEEEECCTTCE
T ss_pred             eeEcCCcccccccee------eeEEEECCCCCccc-eeCHHHHHHHHHHHHHcCCCCceEEEECCC--CEEEEeecCCCc
Confidence            678999999999998      34888987543211 1122467777777743333 4556554333  47899999 665


Q ss_pred             Cch
Q 048419          413 SLD  415 (653)
Q Consensus       413 sL~  415 (653)
                      +|.
T Consensus        94 ~l~   96 (301)
T 3dxq_A           94 TMS   96 (301)
T ss_dssp             ECC
T ss_pred             cCC
Confidence            553

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6

Probab=96.87  E-value=0.01  Score=60.77  Aligned_cols=144  Identities=13%  Similarity=0.082  Sum_probs=80.7

Q ss_pred             eeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCc--eeeeeee-----ecccceeEEEEec
Q 048419          336 NLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRN--LVQLHGW-----CRKQDELLLVYDY  408 (653)
Q Consensus       336 ~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n--iv~l~g~-----~~~~~~~~lV~E~  408 (653)
                      ..++ |....||+.... +|+.+++|...... .....+..|...++.|....  +.+++..     ....+..+++|||
T Consensus        32 ~~l~-g~~n~~y~v~~~-~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~  108 (328)
T 1zyl_A           32 TPLN-SYENRVYQFQDE-DRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPS  108 (328)
T ss_dssp             EEEC-CSSSEEEEECCT-TCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEEC
T ss_pred             Eeec-CcccceEEEEcC-CCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEe
Confidence            4566 778899987654 36679999985321 12345667888877774322  3444443     1123456789999


Q ss_pred             cCCCCchh----h----------hhccccc----ccccchhhhH----H---------------HHHHHHHHHHHHHHhc
Q 048419          409 VPNGSLDK----L----------LFDKDHK----LRKLLTWDQR----Y---------------KILIGIAQSLLYLHEE  451 (653)
Q Consensus       409 ~~~gsL~~----~----------l~~~~~~----~~~~l~~~~~----~---------------~i~~~ia~~L~yLH~~  451 (653)
                      ++|..+..    .          ++.....    ....+++...    .               .+...+...+..+.+.
T Consensus       109 i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~  188 (328)
T 1zyl_A          109 VGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAH  188 (328)
T ss_dssp             CCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHH
Confidence            98865431    0          1111000    0011111100    0               0111112223333321


Q ss_pred             ----CCCCeEecCCCCCcEEEcCCCcEEEEeecCccc
Q 048419          452 ----CNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKI  484 (653)
Q Consensus       452 ----~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~  484 (653)
                          ....++|+|+++.|||++ + .+.|+||+.+..
T Consensus       189 ~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~  223 (328)
T 1zyl_A          189 WREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN  223 (328)
T ss_dssp             CCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred             hhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence                235689999999999999 4 899999988764

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=96.86  E-value=0.0063  Score=62.52  Aligned_cols=143  Identities=15%  Similarity=0.109  Sum_probs=72.2

Q ss_pred             eeeeeeCcEE-EEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCC--CceeeeeeeecccceeEEEEeccCCC
Q 048419          336 NLVGSGGFGR-VYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRH--RNLVQLHGWCRKQDELLLVYDYVPNG  412 (653)
Q Consensus       336 ~~LG~G~fg~-Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H--~niv~l~g~~~~~~~~~lV~E~~~~g  412 (653)
                      +.|+.|.... +|+.... ++..+++|.......   +.+..|+.+++.+..  -.+.+++.++.+.+  +++||++.+.
T Consensus        24 ~~l~gg~s~~~~~r~~~~-~~~~~vlk~~~~~~~---~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~~   97 (333)
T 3csv_A           24 TPLAGDASSRRYQRLRSP-TGAKAVLMDWSPEEG---GDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGDA   97 (333)
T ss_dssp             CC--------CCEEEECT-TCCEEEEEECCTTTT---CCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCSC
T ss_pred             eECCCCCCCceEEEEEcC-CCCeEEEEECCCCCC---ccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCCc
Confidence            4465554444 6676542 256677776533221   223456666666632  23556676654444  6899999776


Q ss_pred             Cchhhhhccccc-----------------c-cccch-hhh--H---------------H-----HHHHHHHHHHHHHH--
Q 048419          413 SLDKLLFDKDHK-----------------L-RKLLT-WDQ--R---------------Y-----KILIGIAQSLLYLH--  449 (653)
Q Consensus       413 sL~~~l~~~~~~-----------------~-~~~l~-~~~--~---------------~-----~i~~~ia~~L~yLH--  449 (653)
                      .+.+++......                 . ...++ |..  .               +     .....+...+..|.  
T Consensus        98 ~l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~  177 (333)
T 3csv_A           98 LFTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSA  177 (333)
T ss_dssp             BHHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHH
T ss_pred             chHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHh
Confidence            665444321100                 0 00000 000  0               0     00011112222221  


Q ss_pred             -hcCCCCeEecCCCCCcEEEcCC----CcEEEEeecCccc
Q 048419          450 -EECNQRVVHRDVKPSNILLDTY----LNAKLGDFGLAKI  484 (653)
Q Consensus       450 -~~~~~~ivH~Dlkp~NIll~~~----~~~kl~DfGla~~  484 (653)
                       ......++|+|+.+.|||++.+    ..+.|+||+.+..
T Consensus       178 ~~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~  217 (333)
T 3csv_A          178 QLEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL  217 (333)
T ss_dssp             HCCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred             cccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence             1124689999999999999874    6799999998875

>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*

Probab=96.63  E-value=0.0054  Score=64.13  Aligned_cols=75  Identities=11%  Similarity=0.100  Sum_probs=44.4

Q ss_pred             ceeeeeeCcEEEEEEEeCC--------CCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCce-eeeeeeecccceeEEE
Q 048419          335 QNLVGSGGFGRVYRGLMPS--------LGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNL-VQLHGWCRKQDELLLV  405 (653)
Q Consensus       335 ~~~LG~G~fg~Vy~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~g~~~~~~~~~lV  405 (653)
                      .+.|+.|....+|+....+        .+..+++|+...... .......|..+++.|...++ .++++..  .  -++|
T Consensus        38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~-~~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~~v  112 (369)
T 3c5i_A           38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVD-ELYNTISEFEVYKTMSKYKIAPQLLNTF--N--GGRI  112 (369)
T ss_dssp             EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGG-GTSCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEE
T ss_pred             EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCcc-ceecHHHHHHHHHHHHhcCCCCceEEec--C--CcEE
Confidence            4567778888999988753        126788888754322 11123578888887753343 3565543  2  2689


Q ss_pred             EeccCCCCc
Q 048419          406 YDYVPNGSL  414 (653)
Q Consensus       406 ~E~~~~gsL  414 (653)
                      |||++|..+
T Consensus       113 ~e~i~G~~l  121 (369)
T 3c5i_A          113 EEWLYGDPL  121 (369)
T ss_dssp             EECCCSEEC
T ss_pred             EEEecCCcC
Confidence            999987654

>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A

Probab=96.58  E-value=0.0029  Score=60.14  Aligned_cols=105  Identities=15%  Similarity=0.071  Sum_probs=68.4

Q ss_pred             CCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCCCC
Q 048419          412 GSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANP  491 (653)
Q Consensus       412 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~  491 (653)
                      -+|.+.|...    ..+++++++|.++.|.+.+|.-+-..  +.-..+=+.|..|+|..+|++...+ ..+.        
T Consensus        33 vSL~eIL~~~----~~PlsEEqaWALc~Qc~~~L~~~~~~--~~~~~~i~~~~~i~l~~dG~V~f~~-~~s~--------   97 (229)
T 2yle_A           33 LSLEEILRLY----NQPINEEQAWAVCYQCCGSLRAAARR--RQPRHRVRSAAQIRVWRDGAVTLAP-AADD--------   97 (229)
T ss_dssp             EEHHHHHHHH----TSCCCHHHHHHHHHHHHHHHHHHHHT--TCCCCCCCSGGGEEEETTSCEEECC-C-----------
T ss_pred             ccHHHHHHHc----CCCcCHHHHHHHHHHHHHHHHhhhhc--ccCCceecCCcceEEecCCceeccc-cccc--------
Confidence            4788888766    46799999999999999998776221  1111233457899999999988754 1110        


Q ss_pred             cccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCC
Q 048419          492 QTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIE  537 (653)
Q Consensus       492 ~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~  537 (653)
                           .....+.+||... ...+.+.-|||+|+++|..+--..|-.
T Consensus        98 -----~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~e~  137 (229)
T 2yle_A           98 -----AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLKEN  137 (229)
T ss_dssp             --------------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCCTT
T ss_pred             -----ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCCcc
Confidence                 1122456888763 355678899999999999987555433

>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*

Probab=95.68  E-value=0.056  Score=55.67  Aligned_cols=31  Identities=16%  Similarity=0.264  Sum_probs=27.9

Q ss_pred             CCeEecCCCCCcEEEcCCCcEEEEeecCccc
Q 048419          454 QRVVHRDVKPSNILLDTYLNAKLGDFGLAKI  484 (653)
Q Consensus       454 ~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~  484 (653)
                      ..++|+|+.+.||+++.++.+.|+||+.+..
T Consensus       206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~  236 (339)
T 3i1a_A          206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPML  236 (339)
T ss_dssp             CEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred             ceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence            5799999999999999888899999988764

>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}

Probab=94.16  E-value=0.13  Score=54.69  Aligned_cols=144  Identities=13%  Similarity=0.117  Sum_probs=84.0

Q ss_pred             ceeeeeeCcEEEEEEEeCCC-------CcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCc-eeeeeeeecccceeEEEE
Q 048419          335 QNLVGSGGFGRVYRGLMPSL-------GLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRN-LVQLHGWCRKQDELLLVY  406 (653)
Q Consensus       335 ~~~LG~G~fg~Vy~~~~~~~-------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n-iv~l~g~~~~~~~~~lV~  406 (653)
                      .+.+..|-...+|+......       +..+++|+....... .-...+|..+++.|...+ ..++++.+.    -++|+
T Consensus        75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~-~idR~~E~~~l~~L~~~gi~P~l~~~~~----~~~I~  149 (424)
T 3mes_A           75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGK-FYDSKVELDVFRYLSNINIAPNIIADFP----EGRIE  149 (424)
T ss_dssp             EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-C-CCCHHHHHHHHHHHHHTTSSCCEEEEET----TEEEE
T ss_pred             EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcch-hcCHHHHHHHHHHHHhcCCCCCEEEEcC----CCEEE
Confidence            45677777889999887531       577999987443211 112346788887774323 344555332    27899


Q ss_pred             eccCCCCchhh-h----------------hcccc------c--ccccchhhhHHHHHHHH-------------------H
Q 048419          407 DYVPNGSLDKL-L----------------FDKDH------K--LRKLLTWDQRYKILIGI-------------------A  442 (653)
Q Consensus       407 E~~~~gsL~~~-l----------------~~~~~------~--~~~~l~~~~~~~i~~~i-------------------a  442 (653)
                      ||++|..|..- +                +....      .  ...+..|.++.++..++                   .
T Consensus       150 efI~G~~l~~~~l~~~~~~~~ia~~La~LH~~~~~~~~L~~~~~~~p~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~  229 (424)
T 3mes_A          150 EFIDGEPLTTKQLQLTHICVEVAKNMGSLHIINSKRADFPSRFDKEPILFKRIYLWREEAKIQVSKNNFQIDKELYSKIL  229 (424)
T ss_dssp             ECCCSEECCTGGGGSHHHHHHHHHHHHHHHTHHHHCTTSCTTSCCSCCHHHHHHHHHHHHHHHHHTCC--CCHHHHHHHH
T ss_pred             EEeCCccCChhhcCCHHHHHHHHHHHHHHhcCchhhccCccccCCCCcHHHHHHHHHHHHHHhhcccchhhccccHHHHH
Confidence            99998765321 1                11000      0  01112344444433322                   1


Q ss_pred             HHHHHHHh---------------------cCCCCeEecCCCCCcEEEcCCCcEEEEeecCccc
Q 048419          443 QSLLYLHE---------------------ECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKI  484 (653)
Q Consensus       443 ~~L~yLH~---------------------~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~  484 (653)
                      ..+..|.+                     .....++|+|+.+.||+ +.++.+.|+||..+..
T Consensus       230 ~e~~~L~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~  291 (424)
T 3mes_A          230 EEIDQLEELIMGGEKFSMERALELKLYSPAFSLVFAHNDLQENNLL-QTQNNIRMIDYEYSAI  291 (424)
T ss_dssp             HHHHHHHHHHHTSSCCCHHHHHHHHTTCGGGCEEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred             HHHHHHHHHHhhhcccccccccccccccCCCCceEECCCCCcccee-cCCCcEEEEecccCCc
Confidence            22333321                     11346899999999999 8888999999998864

>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*

Probab=92.80  E-value=0.6  Score=49.07  Aligned_cols=30  Identities=30%  Similarity=0.358  Sum_probs=25.3

Q ss_pred             CeEecCCCCCcEEE------cCCCcEEEEeecCccc
Q 048419          455 RVVHRDVKPSNILL------DTYLNAKLGDFGLAKI  484 (653)
Q Consensus       455 ~ivH~Dlkp~NIll------~~~~~~kl~DfGla~~  484 (653)
                      .++|+|+.+.|||+      +++..++++||.+|..
T Consensus       245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~  280 (401)
T 3g15_A          245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY  280 (401)
T ss_dssp             EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred             eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence            36799999999999      4567799999998864

>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}

Probab=85.27  E-value=0.21  Score=34.21  Aligned_cols=24  Identities=13%  Similarity=0.300  Sum_probs=11.1

Q ss_pred             ehhhHHHHHHHHHHHHhhhhhhhh
Q 048419          280 TLAGMAFLILIIAGAIHVLQRIKY  303 (653)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~  303 (653)
                      ++++++++++++++.++++||++.
T Consensus        17 VVgGv~~~~ii~~~~~~~~RRr~~   40 (44)
T 2ks1_B           17 MVGALLLLLVVALGIGLFMRRRHI   40 (44)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred             hhHHHHHHHHHHHHHHHHhhhhHh
Confidence            344444444444444555555443

>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}

Probab=84.14  E-value=0.19  Score=34.34  Aligned_cols=25  Identities=12%  Similarity=0.165  Sum_probs=11.8

Q ss_pred             eehhhHHHHHHHHHHHHhhhhhhhh
Q 048419          279 ITLAGMAFLILIIAGAIHVLQRIKY  303 (653)
Q Consensus       279 i~~~~~~~~~~~~~~~~~~~~~~~~  303 (653)
                      -++++++++++++.+.++++||++.
T Consensus        15 gVVgGv~~v~ii~~~~~~~~RRRr~   39 (44)
T 2l2t_A           15 GVIGGLFILVIVGLTFAVYVRRKSI   39 (44)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred             eehHHHHHHHHHHHHHHHHhhhhhh
Confidence            3344444444444444555555544

>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A

Probab=81.90  E-value=0.12  Score=55.53  Aligned_cols=59  Identities=14%  Similarity=0.179  Sum_probs=16.5

Q ss_pred             ceeeeeeCcEEEEEEEeCCCCcEEEE------EEeccC--chhhHHHHHHHHHHHhhcCCCceeeeeeee
Q 048419          335 QNLVGSGGFGRVYRGLMPSLGLEVAI------KRIGHN--SQQGMKEFVAEIMSMGRLRHRNLVQLHGWC  396 (653)
Q Consensus       335 ~~~LG~G~fg~Vy~~~~~~~~~~vav------K~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~  396 (653)
                      .+.||   ||.||+|.+.....+|||      |.....  ..+....|.+|..+++.++|+|+++.+++.
T Consensus       147 ~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~  213 (463)
T 3cxl_A          147 YEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFK  213 (463)
T ss_dssp             TTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEE
T ss_pred             cccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceE
Confidence            45566   999999999765578898      766432  334456788899999999999999988764

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	653
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	8e-63
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	5e-60
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	1e-59
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	1e-58
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	3e-57
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	4e-57
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	1e-56
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	2e-56
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	2e-55
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	3e-55
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	6e-55
d1qnwa_	237	b.29.1.1 (A:) Legume lectin {Furze (Ulex europaeus	9e-55
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	1e-54
d1gzca_	239	b.29.1.1 (A:) Legume lectin {Cockspur coral tree (	2e-54
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	3e-54
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	5e-54
d1g8wa_	233	b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also ar	1e-53
d1avba_	226	b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also ar	1e-53
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	1e-53
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	2e-53
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	3e-53
d1hqla_	236	b.29.1.1 (A:) Legume lectin {Griffonia simplicifol	3e-53
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	4e-53
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	6e-53
d1g9fa_	251	b.29.1.1 (A:) Legume lectin {Soybean (Glycine max)	6e-53
d2d3sa1	237	b.29.1.1 (A:1-237) Legume lectin {Winged bean (Pso	8e-53
d1f9ka_	234	b.29.1.1 (A:) Legume lectin {Winged bean (Psophoca	8e-53
d1dbna_	239	b.29.1.1 (A:) Legume lectin {Maackia amurensis, le	3e-52
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	4e-52
d1fx5a_	240	b.29.1.1 (A:) Legume lectin {Furze (Ulex europaeus	4e-52
d1v6ia_	232	b.29.1.1 (A:) Legume lectin {Peanut (Arachis hypog	5e-52
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	8e-52
d1leda_	243	b.29.1.1 (A:) Legume lectin {West-central african	5e-51
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	5e-51
g1qmo.1	230	b.29.1.1 (A:,E:) Legume lectin {Field bean (Dolich	9e-51
d1g7ya_	253	b.29.1.1 (A:) Legume lectin {Horse gram (Dolichos	1e-50
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	1e-50
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	2e-50
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	2e-50
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	3e-50
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	6e-50
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	9e-50
d1ukga_	241	b.29.1.1 (A:) Legume lectin {Bloodwood tree (Ptero	2e-49
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	3e-49
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	5e-49
g2ltn.1	229	b.29.1.1 (A:,B:) Legume lectin {Garden pea (Pisum	6e-49
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	8e-49
d1fnya_	237	b.29.1.1 (A:) Legume lectin {Black locust (Robinia	2e-48
d1n47a_	233	b.29.1.1 (A:) Legume lectin {Hairy vetch (Vicia vi	2e-48
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	2e-47
d1ioaa_	228	b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also ar	1e-46
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	2e-45
d1dhkb_	204	b.29.1.1 (B:) Phytohemagglutinin-L, PHA-L, also ar	2e-44
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	2e-44
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	1e-43
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	1e-43
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	6e-43
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	1e-42
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	6e-42
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	7e-42
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	1e-41
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	2e-41
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	3e-41
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	2e-40
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	4e-40
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	6e-40
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	6e-39
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	6e-39
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	1e-38
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	2e-38
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	6e-38
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	4e-37
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	5e-37
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	1e-36
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	1e-35
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	9e-35
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	1e-33
d1nlsa_	237	b.29.1.1 (A:) Concanavalin A {Jack bean (Canavalia	1e-33
d1nlsa_	237	b.29.1.1 (A:) Concanavalin A {Jack bean (Canavalia	8e-20
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	2e-32
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	3e-31
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	4e-31
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	2e-29
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	2e-26
d1gv9a_	228	b.29.1.13 (A:) Carbohydrate-recognition domain of	1e-21
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	6e-20
d2a6va1	218	b.29.1.13 (A:9-226) Emp46p N-terminal domain {Bake	2e-05
d2a6za1	221	b.29.1.13 (A:7-227) Emp47p N-terminal domain {Bake	3e-04

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  207 bits (528), Expect = 8e-63
 Identities = 70/302 (23%), Positives = 126/302 (41%), Gaps = 41/302 (13%)

Query: 309 EDWEIQCGARRFKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRI--GHN 366
           +DWEI  G  +                  +GSG FG VY+G       +VA+K +     
Sbjct: 1   DDWEIPDG--QITV------------GQRIGSGSFGTVYKGKWHG---DVAVKMLNVTAP 43

Query: 367 SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLR 426
           + Q ++ F  E+  + + RH N++   G+     +L +V  +    SL   L    H + 
Sbjct: 44  TPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQWCEGSSLYHHL----HIIE 98

Query: 427 KLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE 486
                 +   I    AQ + YLH    + ++HRD+K +NI L   L  K+GDFGLA +  
Sbjct: 99  TKFEMIKLIDIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKS 155

Query: 487 HGANP-QTTHIVGTLGYLAPELTRT---GKATTSTDVYSYGILMLEVACGRRSIEPQKAA 542
             +   Q   + G++ ++APE+ R       +  +DVY++GI++ E+  G+         
Sbjct: 156 RWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS----- 210

Query: 543 AELLLVDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVE 602
             +   D +  +   G ++  + +       A   L+      C       RP   +++ 
Sbjct: 211 -NINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAE----CLKKKRDERPLFPQILA 265

Query: 603 FL 604
            +
Sbjct: 266 SI 267

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  199 bits (508), Expect = 5e-60
 Identities = 70/297 (23%), Positives = 122/297 (41%), Gaps = 39/297 (13%)

Query: 309 EDWEIQCGARRFKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQ 368
           ++WE+       K  E             +G+G FG V+ G       +VA+K +     
Sbjct: 6   DEWEVP--RETLKLVER------------LGAGQFGEVWMGYYNG-HTKVAVKSL-KQGS 49

Query: 369 QGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKL 428
                F+AE   M +L+H+ LV+L+     Q+ + ++ +Y+ NGSL   L          
Sbjct: 50  MSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYMENGSLVDFLKTPS---GIK 105

Query: 429 LTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHG 488
           LT ++   +   IA+ + ++ E      +HRD++ +NIL+   L+ K+ DFGLA++ E  
Sbjct: 106 LTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDN 162

Query: 489 ANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELL-L 547
                      + + APE    G  T  +DV+S+GIL+ E+    R   P     E++  
Sbjct: 163 EYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQN 222

Query: 548 VDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL 604
           ++    +       + + Q               L   C    P  RP    +   L
Sbjct: 223 LERGYRMVRPDNCPEELYQ---------------LMRLCWKERPEDRPTFDYLRSVL 264

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  201 bits (511), Expect = 1e-59
 Identities = 55/208 (26%), Positives = 101/208 (48%), Gaps = 11/208 (5%)

Query: 332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGM-KEFVAEIMSMGRLRHRNLV 390
           F + + +G+G  G V++      GL +A K I    +  +  + + E+  +       +V
Sbjct: 8   FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 67

Query: 391 QLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHE 450
             +G      E+ +  +++  GSLD++L          +      K+ I + + L YL E
Sbjct: 68  GFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR-----IPEQILGKVSIAVIKGLTYLRE 122

Query: 451 ECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRT 510
           +   +++HRDVKPSNIL+++    KL DFG++              VGT  Y++PE  + 
Sbjct: 123 KH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGTRSYMSPERLQG 177

Query: 511 GKATTSTDVYSYGILMLEVACGRRSIEP 538
              +  +D++S G+ ++E+A GR  I P
Sbjct: 178 THYSVQSDIWSMGLSLVEMAVGRYPIPP 205

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  196 bits (499), Expect = 1e-58
 Identities = 78/314 (24%), Positives = 124/314 (39%), Gaps = 41/314 (13%)

Query: 309 EDWEIQCGARRFKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQ 368
           + WEI       +             +  +G G FG V+ G        VAIK +     
Sbjct: 10  DAWEIP--RESLRL------------EVKLGQGCFGEVWMGTWNG-TTRVAIKTL-KPGT 53

Query: 369 QGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKL 428
              + F+ E   M +LRH  LVQL+     ++ + +V +Y+  GSL   L  +  K  + 
Sbjct: 54  MSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKGETGKYLR- 111

Query: 429 LTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHG 488
               Q   +   IA  + Y+        VHRD++ +NIL+   L  K+ DFGLA++ E  
Sbjct: 112 --LPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDN 166

Query: 489 ANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELL-L 547
                      + + APE    G+ T  +DV+S+GIL+ E+    R   P     E+L  
Sbjct: 167 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQ 226

Query: 548 VDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL--L 605
           V+    +    E  ++               + +L   C    P  RP    +  FL   
Sbjct: 227 VERGYRMPCPPECPES---------------LHDLMCQCWRKEPEERPTFEYLQAFLEDY 271

Query: 606 GDSSLPPLPPDIHL 619
             S+ P   P  +L
Sbjct: 272 FTSTEPQYQPGENL 285

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  193 bits (491), Expect = 3e-57
 Identities = 72/294 (24%), Positives = 117/294 (39%), Gaps = 33/294 (11%)

Query: 335 QNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHG 394
           Q  +G G FG V+RG     G EVA+K    + ++      AEI     LRH N++    
Sbjct: 8   QESIGKGRFGEVWRGKWR--GEEVAVKIF-SSREERSWFREAEIYQTVMLRHENILGFIA 64

Query: 395 WCRKQD----ELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHE 450
              K +    +L LV DY  +GSL   L       R  +T +   K+ +  A  L +LH 
Sbjct: 65  ADNKDNGTWTQLWLVSDYHEHGSLFDYLN------RYTVTVEGMIKLALSTASGLAHLHM 118

Query: 451 EC-----NQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANP---QTTHIVGTLGY 502
           E         + HRD+K  NIL+       + D GLA  ++   +       H VGT  Y
Sbjct: 119 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRY 178

Query: 503 LAPEL------TRTGKATTSTDVYSYGILMLEVACGRR----SIEPQKAAAELLLVDWVK 552
           +APE+       +  ++    D+Y+ G++  E+A          + Q    +L+  D   
Sbjct: 179 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSV 238

Query: 553 ELHLEGEITQAIDQTL--DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL 604
           E   +    Q +   +   +       ++  +   C   N   R    R+ + L
Sbjct: 239 EEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTL 292

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  192 bits (488), Expect = 4e-57
 Identities = 62/270 (22%), Positives = 113/270 (41%), Gaps = 25/270 (9%)

Query: 336 NLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGW 395
             +GSG FG V+ G   +   +VAIK I        ++F+ E   M +L H  LVQL+G 
Sbjct: 11  QEIGSGQFGLVHLGYWLN-KDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGV 68

Query: 396 CRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQR 455
           C +Q  + LV++++ +G L   L  +      L   +    + + + + +          
Sbjct: 69  CLEQAPICLVFEFMEHGCLSDYLRTQRG----LFAAETLLGMCLDVCEGM---AYLEEAC 121

Query: 456 VVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATT 515
           V+HRD+   N L+      K+ DFG+ +         +T     + + +PE+    + ++
Sbjct: 122 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSS 181

Query: 516 STDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYYDLAE 575
            +DV+S+G+LM EV    +     ++ +E++               + I      Y    
Sbjct: 182 KSDVWSFGVLMWEVFSEGKIPYENRSNSEVV---------------EDISTGFRLYKPRL 226

Query: 576 A-ELVLNLGLFCSAPNPVYRPDMRRVVEFL 604
           A   V  +   C    P  RP   R++  L
Sbjct: 227 ASTHVYQIMNHCWKERPEDRPAFSRLLRQL 256

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  190 bits (483), Expect = 1e-56
 Identities = 64/271 (23%), Positives = 114/271 (42%), Gaps = 25/271 (9%)

Query: 336 NLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGW 395
             +G+G FG V  G       +VAIK I         EF+ E   M  L H  LVQL+G 
Sbjct: 10  KELGTGQFGVVKYGKWRG-QYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGV 67

Query: 396 CRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQR 455
           C KQ  + ++ +Y+ NG L   L +  H+        Q  ++   + +++ YL    +++
Sbjct: 68  CTKQRPIFIITEYMANGCLLNYLREMRHRF----QTQQLLEMCKDVCEAMEYLE---SKQ 120

Query: 456 VVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATT 515
            +HRD+   N L++     K+ DFGL++         +      + +  PE+    K ++
Sbjct: 121 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSS 180

Query: 516 STDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYYDLAE 575
            +D++++G+LM E+    +    +   +E                 + I Q L  Y    
Sbjct: 181 KSDIWAFGVLMWEIYSLGKMPYERFTNSETA---------------EHIAQGLRLYRPHL 225

Query: 576 A-ELVLNLGLFCSAPNPVYRPDMRRVVEFLL 605
           A E V  +   C       RP  + ++  +L
Sbjct: 226 ASEKVYTIMYSCWHEKADERPTFKILLSNIL 256

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  191 bits (486), Expect = 2e-56
 Identities = 76/303 (25%), Positives = 135/303 (44%), Gaps = 40/303 (13%)

Query: 320 FKYAELASVTKGFGE---------QNLVGSGGFGRVYRGLMPSLG---LEVAIKRI-GHN 366
           F + +     + F +         + ++G+G FG V  G +   G   + VAIK +    
Sbjct: 7   FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 66

Query: 367 SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLR 426
           +++  ++F++E   MG+  H N++ L G   K   ++++ +++ NGSLD  L   D +  
Sbjct: 67  TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQF- 125

Query: 427 KLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE 486
              T  Q   +L GIA  + YL    +   VHRD+   NIL+++ L  K+ DFGL++  E
Sbjct: 126 ---TVIQLVGMLRGIAAGMKYLA---DMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLE 179

Query: 487 HGANPQTTH----IVGTLGYLAPELTRTGKATTSTDVYSYGILMLE-VACGRRSIEPQKA 541
              +  T          + + APE  +  K T+++DV+SYGI+M E ++ G R       
Sbjct: 180 DDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTN 239

Query: 542 AAELLLVDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVV 601
              +  ++    L    +   A               +  L L C   +  +RP   ++V
Sbjct: 240 QDVINAIEQDYRLPPPMDCPSA---------------LHQLMLDCWQKDRNHRPKFGQIV 284

Query: 602 EFL 604
             L
Sbjct: 285 NTL 287

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  188 bits (477), Expect = 2e-55
 Identities = 63/296 (21%), Positives = 125/296 (42%), Gaps = 35/296 (11%)

Query: 309 EDWEIQCGARRFKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQ 368
           + WE++                    ++ +G G +G VY G+     L VA+K +  ++ 
Sbjct: 10  DKWEME--RTDITM------------KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM 55

Query: 369 QGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKL 428
           + ++EF+ E   M  ++H NLVQL G C ++    ++ +++  G+L   L + +   R+ 
Sbjct: 56  E-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN---RQE 111

Query: 429 LTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHG 488
           ++      +   I+ ++ YL +   +  +HRD+   N L+      K+ DFGL+++    
Sbjct: 112 VSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 168

Query: 489 ANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLV 548
                      + + APE     K +  +DV+++G+L+ E+A    S  P    +++  +
Sbjct: 169 TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL 228

Query: 549 DWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL 604
              K+  +E                   E V  L   C   NP  RP    + +  
Sbjct: 229 -LEKDYRME-------------RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 270

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  188 bits (478), Expect = 3e-55
 Identities = 76/297 (25%), Positives = 115/297 (38%), Gaps = 35/297 (11%)

Query: 329 TKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRI---GHNSQQGMKEFVAEIMSMGRLR 385
            K F +   +G G FG VY          VAIK++   G  S +  ++ + E+  + +LR
Sbjct: 14  EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR 73

Query: 386 HRNLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSL 445
           H N +Q  G   ++    LV +Y    +      D     +K L   +   +  G  Q L
Sbjct: 74  HPNTIQYRGCYLREHTAWLVMEYCLGSAS-----DLLEVHKKPLQEVEIAAVTHGALQGL 128

Query: 446 LYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAP 505
            YLH      ++HRDVK  NILL      KLGDFG A I            VGT  ++AP
Sbjct: 129 AYLHS---HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMA-----PANSFVGTPYWMAP 180

Query: 506 EL---TRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQ 562
           E+      G+     DV+S GI  +E+A  +  +    A + L  +        + E   
Sbjct: 181 EVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHI-------AQNESPA 233

Query: 563 AIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVE--FLLGDSSLPPLPPDI 617
                         E   N    C    P  RP    +++  F+L +     +   I
Sbjct: 234 LQSGHWS-------EYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERPPTVIMDLI 283

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  186 bits (473), Expect = 6e-55
 Identities = 61/273 (22%), Positives = 111/273 (40%), Gaps = 23/273 (8%)

Query: 336 NLVGSGGFGRVYRGLMPSLGLEVAIKRI--GHNSQQGMKEFVAEIMSMGRLRHRNLVQLH 393
             +G+G +GR  +    S G  +  K +  G  ++   +  V+E+  +  L+H N+V+ +
Sbjct: 10  YTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYY 69

Query: 394 GWC--RKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHE- 450
                R    L +V +Y   G L  ++  K  K R+ L  +   +++  +  +L   H  
Sbjct: 70  DRIIDRTNTTLYIVMEYCEGGDLASVIT-KGTKERQYLDEEFVLRVMTQLTLALKECHRR 128

Query: 451 -ECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTR 509
            +    V+HRD+KP+N+ LD   N KLGDFGLA+I  H         VGT  Y++PE   
Sbjct: 129 SDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD-TSFAKAFVGTPYYMSPEQMN 187

Query: 510 TGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLD 569
                  +D++S G L+ E+                  +   K   +    +  +     
Sbjct: 188 RMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSDEL----- 242

Query: 570 YYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVE 602
             ++                   +RP +  ++E
Sbjct: 243 -NEIITR---------MLNLKDYHRPSVEEILE 265

>d1qnwa_ b.29.1.1 (A:) Legume lectin {Furze (Ulex europaeus), UEA-II [TaxId: 3902]} Length = 237

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Furze (Ulex europaeus), UEA-II [TaxId: 3902]

 Score =  184 bits (469), Expect = 9e-55
 Identities = 58/250 (23%), Positives = 106/250 (42%), Gaps = 26/250 (10%)

Query: 6   ADTTSFLYNGFL--HANLSLEGAAYISTSGILTVTNKSEGL---IGHALYPNPLRFKTSN 60
           +D  SF ++ F+    N+  +G A +ST+G+L VT  S+     IG ALY  P++   S 
Sbjct: 1   SDDLSFNFDKFVPNQKNIIFQGDASVSTTGVLQVTKVSKPTTTSIGRALYAAPIQIWDSI 60

Query: 61  KSVAIDFRTNFVFSILPKYPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTKFS 120
                 F T+F F +     D       F+  + ++  +  +    GL + + S S   S
Sbjct: 61  TGKVASFATSFSFVVKADKSDGVDGLAFFLAPANSQIPSGSSAGMFGLFSSSDSKS---S 117

Query: 121 TRMLAVEFDIIQNTEL--IDINDNHVGIDISSLISSASEPASYYSGNNHRIPILLRSGDP 178
            +++AVEFD          D +  H+GID++S+ S  +    + +G              
Sbjct: 118 NQIIAVEFDTYFGKAYNPWDPDFKHIGIDVNSIKSIKTVKWDWRNGEVA----------- 166

Query: 179 IQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLITA-- 236
               + Y +    + V +           +I+  +DL +++ E++  GFS   G      
Sbjct: 167 -DVVITYRAPTKSLTVCLSYPS--DGTSNIITASVDLKAILPEWVSVGFSGGVGNAAEFE 223

Query: 237 SHNVHGWSIS 246
           +H+V  W  +
Sbjct: 224 THDVLSWYFT 233

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  185 bits (472), Expect = 1e-54
 Identities = 63/283 (22%), Positives = 121/283 (42%), Gaps = 28/283 (9%)

Query: 336 NLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGW 395
             +G G FG+VY+       +  A K I   S++ +++++ EI  +    H N+V+L   
Sbjct: 18  GELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 77

Query: 396 CRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQR 455
              ++ L ++ ++   G++D ++     +L + LT  Q   +      +L YLH+    +
Sbjct: 78  FYYENNLWILIEFCAGGAVDAVM----LELERPLTESQIQVVCKQTLDALNYLHD---NK 130

Query: 456 VVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL-----TRT 510
           ++HRD+K  NIL     + KL DFG++         +    +GT  ++APE+     ++ 
Sbjct: 131 IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRT-IQRRDSFIGTPYWMAPEVVMCETSKD 189

Query: 511 GKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDY 570
                  DV+S GI ++E+A              LL            +I ++   TL  
Sbjct: 190 RPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLL------------KIAKSEPPTLAQ 237

Query: 571 YDLAEAELVLNLGLFCSAPNPVYRPDMRRVVE--FLLGDSSLP 611
                +    +    C   N   R    ++++  F+  DS+ P
Sbjct: 238 PSRWSSNFK-DFLKKCLEKNVDARWTTSQLLQHPFVTVDSNKP 279

>d1gzca_ b.29.1.1 (A:) Legume lectin {Cockspur coral tree (Erythrina crista-galli) [TaxId: 49817]} Length = 239

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Cockspur coral tree (Erythrina crista-galli) [TaxId: 49817]

 Score =  184 bits (467), Expect = 2e-54
 Identities = 61/251 (24%), Positives = 103/251 (41%), Gaps = 29/251 (11%)

Query: 7   DTTSFLYNGFLHA--NLSLEGAAYISTSGILTVTNKSEG------LIGHALYPNPLRFKT 58
           +T SF ++ F     NL+L+GAA I+ SG+L +T  ++         G  LY  P+    
Sbjct: 2   ETISFSFSEFEPGNDNLTLQGAALITQSGVLQLTKINQNGMPAWDSTGRTLYTKPVHMWD 61

Query: 59  SNKSVAIDFRTNFVFSILPKYPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTK 118
           S       F T F FSI   Y            +   + +      +LG+ N   +S   
Sbjct: 62  STTGTVASFETRFSFSIEQPYTRPLPADGLVFFMGPTKSKPAQGYGYLGVFN---NSKQD 118

Query: 119 FSTRMLAVEFDIIQNTELIDINDNHVGIDISSLISSASEPASYYSGNNHRIPILLRSGDP 178
            S + LAVEFD   N         H+GID++S+ S  ++P              L +G  
Sbjct: 119 NSYQTLAVEFDTFSN-PWDPPQVPHIGIDVNSIRSIKTQPFQ------------LDNGQV 165

Query: 179 IQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGL---IT 235
               + Y +   +++V +            I+  +D+  V+ +++  G S +TG      
Sbjct: 166 ANVVIKYDAPSKILHVVLVY--PSSGAIYTIAEIVDVKQVLPDWVDVGLSGATGAQRDAA 223

Query: 236 ASHNVHGWSIS 246
            +H+V+ WS  
Sbjct: 224 ETHDVYSWSFQ 234

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  185 bits (471), Expect = 3e-54
 Identities = 68/292 (23%), Positives = 115/292 (39%), Gaps = 25/292 (8%)

Query: 328 VTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHR 387
             K +     +G G  G VY  +  + G EVAI+++    Q   +  + EI+ M   ++ 
Sbjct: 18  PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNP 77

Query: 388 NLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLY 447
           N+V         DEL +V +Y+  GSL  ++ +            Q   +     Q+L +
Sbjct: 78  NIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCM------DEGQIAAVCRECLQALEF 131

Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
           LH     +V+HRD+K  NILL    + KL DFG           + + +VGT  ++APE+
Sbjct: 132 LHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE-QSKRSTMVGTPYWMAPEV 187

Query: 508 TRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQT 567
                     D++S GI+ +E+  G      +     L L+        E +  + +   
Sbjct: 188 VTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLI--ATNGTPELQNPEKLSAI 245

Query: 568 LDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVE--FLLGDSSLPPLPPDI 617
               D             C   +   R   + +++  FL     L  L P I
Sbjct: 246 F--RDFLNR---------CLDMDVEKRGSAKELLQHQFLKIAKPLSSLTPLI 286

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  183 bits (466), Expect = 5e-54
 Identities = 66/279 (23%), Positives = 111/279 (39%), Gaps = 32/279 (11%)

Query: 336 NLVGSGGFGRVYRGLMPSLGLEVAIKRI---GHNSQQGMKEFVAEIMSMGRLRHRNLVQL 392
             +G G FG VY          +A+K +            +   E+     LRH N+++L
Sbjct: 12  RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 71

Query: 393 HGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEEC 452
           +G+      + L+ +Y P G++ + L              +    +  +A +L Y H   
Sbjct: 72  YGYFHDATRVYLILEYAPLGTVYRELQKLSK-----FDEQRTATYITELANALSYCHS-- 124

Query: 453 NQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGK 512
            +RV+HRD+KP N+LL +    K+ DFG +    H  + + T + GTL YL PE+     
Sbjct: 125 -KRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYLPPEMIEGRM 180

Query: 513 ATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYYD 572
                D++S G+L  E   G+   E          +       +E      + +     D
Sbjct: 181 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI-----SRVEFTFPDFVTEGA--RD 233

Query: 573 LAEAELVLNLGLFCSAPNPVYRPDMRRVVE--FLLGDSS 609
           L                NP  RP +R V+E  ++  +SS
Sbjct: 234 LISR---------LLKHNPSQRPMLREVLEHPWITANSS 263

>d1g8wa_ b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 233

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Phytohemagglutinin-L, PHA-L, also arcelin
species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]

 Score =  181 bits (461), Expect = 1e-53
 Identities = 65/250 (26%), Positives = 112/250 (44%), Gaps = 30/250 (12%)

Query: 6   ADTTSFLYNGFLHANLSLEGAAYISTSGILTVTNKSE------GLIGHALYPNPLRFKTS 59
           ++   F +  F   NL L+  A +S+SG L +TN +       G +G A Y  P++   +
Sbjct: 1   SNDIYFNFQRFNETNLILQRDASVSSSGQLRLTNLNGNGEPRVGSLGRAFYSAPIQIWDN 60

Query: 60  NKSVAIDFRTNFVFSILPKYPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTKF 119
                  F T+F F+I          GLAF ++            FLGL + + S+    
Sbjct: 61  TTGTVASFATSFTFNIQVPNNAGPADGLAFALVPVGSQPKD-KGGFLGLFDGSNSNF--- 116

Query: 120 STRMLAVEFDIIQNTELIDINDNHVGIDISSLISSASEPASYYSGNNHRIPILLRSGDPI 179
               +AVEFD + N +  D  + H+GID++S+ S  +    + +G N             
Sbjct: 117 --HTVAVEFDTLYNKDW-DPTERHIGIDVNSIRSIKTTRWDFVNGENA------------ 161

Query: 180 QAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLITAS-- 237
           +  + Y S   L+  S+      +    ++S  +DL SV+ E++  GFSA+TG+   +  
Sbjct: 162 EVLITYDSSTNLLVASLVYPS--QKTSFIVSDTVDLKSVLPEWVSVGFSATTGINKGNVE 219

Query: 238 -HNVHGWSIS 246
            ++V  WS +
Sbjct: 220 TNDVLSWSFA 229

>d1avba_ b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 226

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Phytohemagglutinin-L, PHA-L, also arcelin
species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]

 Score =  181 bits (460), Expect = 1e-53
 Identities = 62/247 (25%), Positives = 103/247 (41%), Gaps = 31/247 (12%)

Query: 6   ADTTSFLYNGFLHANLSLEGAAYISTSGILTVTNKS---EGLIGHALYPNPLRFKTSNKS 62
           ++  SF    F   NL L+G A +S+ G L +TN     E  +G A Y  P++       
Sbjct: 1   SNDASFNVETFNKTNLILQGDATVSSEGHLLLTNVKGNEEDSMGRAFYSAPIQINDRTID 60

Query: 63  VAIDFRTNFVFSILPKYPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTKFSTR 122
               F TNF F I  K  +    GLAF ++        L  ++LGL N T          
Sbjct: 61  NLASFSTNFTFRINAKNIENSAYGLAFALVPVGSRPK-LKGRYLGLFNTT---------- 109

Query: 123 MLAVEFDIIQNTELIDINDNHVGIDISSLISSASEPASYYSGNNHRIPILLRSGDPIQAW 182
               + D      + D   N + ID++S+   A+E  ++             +G+  +  
Sbjct: 110 --NYDRDAHTVAVVFDTVSNRIEIDVNSIRPIATESCNFG----------HNNGEKAEVR 157

Query: 183 VDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGL---ITASHN 239
           + Y S +  + VS+         +  +S  + L   +++++  GFSA++G     T +HN
Sbjct: 158 ITYDSPKNDLRVSLLYPS--SEEKCHVSATVPLEKEVEDWVSVGFSATSGSKKETTETHN 215

Query: 240 VHGWSIS 246
           V  WS S
Sbjct: 216 VLSWSFS 222

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  182 bits (463), Expect = 1e-53
 Identities = 74/270 (27%), Positives = 115/270 (42%), Gaps = 29/270 (10%)

Query: 336 NLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGW 395
             +G G FG V  G     G +VA+K I   +    + F+AE   M +LRH NLVQL G 
Sbjct: 13  QTIGKGEFGDVMLGDYR--GNKVAVKCI--KNDATAQAFLAEASVMTQLRHSNLVQLLGV 68

Query: 396 CRKQDE-LLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQ 454
             ++   L +V +Y+  GSL   L  +    R +L  D   K  + + +++ YL      
Sbjct: 69  IVEEKGGLYIVTEYMAKGSLVDYLRSRG---RSVLGGDCLLKFSLDVCEAMEYLEG---N 122

Query: 455 RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKAT 514
             VHRD+   N+L+     AK+ DFGL K      +         + + APE  R  K +
Sbjct: 123 NFVHRDLAARNVLVSEDNVAKVSDFGLTKEA----SSTQDTGKLPVKWTAPEALREKKFS 178

Query: 515 TSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYYDLA 574
           T +DV+S+GIL+ E+    R   P+    +++          +G    A D         
Sbjct: 179 TKSDVWSFGILLWEIYSFGRVPYPRIPLKDVV------PRVEKGYKMDAPDGC------- 225

Query: 575 EAELVLNLGLFCSAPNPVYRPDMRRVVEFL 604
               V  +   C   +   RP   ++ E L
Sbjct: 226 -PPAVYEVMKNCWHLDAAMRPSFLQLREQL 254

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  182 bits (464), Expect = 2e-53
 Identities = 67/272 (24%), Positives = 116/272 (42%), Gaps = 29/272 (10%)

Query: 339 GSGGFGRVYRGLMPSL--GLEVAIKRIGHNSQQG-MKEFVAEIMSMGRLRHRNLVQLHGW 395
           G G FG V +G+       ++VAIK +   +++   +E + E   M +L +  +V+L G 
Sbjct: 18  GCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGV 77

Query: 396 CRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQR 455
           C+ +  L+LV +    G L K L  K    R+ +      ++L  ++  + YL     + 
Sbjct: 78  CQAE-ALMLVMEMAGGGPLHKFLVGK----REEIPVSNVAELLHQVSMGMKYLE---EKN 129

Query: 456 VVHRDVKPSNILLDTYLNAKLGDFGLAKIY--EHGANPQTTHIVGTLGYLAPELTRTGKA 513
            VHRD+   N+LL     AK+ DFGL+K    +       +     L + APE     K 
Sbjct: 130 FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKF 189

Query: 514 TTSTDVYSYGILMLEV-ACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYYD 572
           ++ +DV+SYG+ M E  + G++  +  K    +  ++  K +    E    +      Y 
Sbjct: 190 SSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPPEL------YA 243

Query: 573 LAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL 604
           L            C       RPD   V + +
Sbjct: 244 LMSD---------CWIYKWEDRPDFLTVEQRM 266

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  182 bits (462), Expect = 3e-53
 Identities = 73/281 (25%), Positives = 130/281 (46%), Gaps = 30/281 (10%)

Query: 332 FGEQNLVGSGGFGRVYRGLMPSLG----LEVAIKRI-GHNSQQGMKEFVAEIMSMGRLRH 386
              Q ++G+G FG VY+G++ +      + VAIK +    +++   +F+ E   MG+  H
Sbjct: 9   VTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSH 68

Query: 387 RNLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLL 446
            N+++L G   K   ++++ +Y+ NG+LDK L +KD +     +  Q   +L GIA    
Sbjct: 69  HNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEF----SVLQLVGMLRGIAA--- 121

Query: 447 YLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANP--QTTHIVGTLGYLA 504
            +    N   VHRD+   NIL+++ L  K+ DFGL+++ E        T+     + + A
Sbjct: 122 GMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTA 181

Query: 505 PELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAI 564
           PE     K T+++DV+S+GI+M EV         + +  E++               +AI
Sbjct: 182 PEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVM---------------KAI 226

Query: 565 DQTLDY-YDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL 604
           +        +     +  L + C       RP    +V  L
Sbjct: 227 NDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSIL 267

>d1hqla_ b.29.1.1 (A:) Legume lectin {Griffonia simplicifolia, lectin I-b4 [TaxId: 3850]} Length = 236

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Griffonia simplicifolia, lectin I-b4 [TaxId: 3850]

 Score =  180 bits (458), Expect = 3e-53
 Identities = 55/249 (22%), Positives = 105/249 (42%), Gaps = 26/249 (10%)

Query: 8   TTSFLYNGF---LHANLSLEGAAYISTSGILTVTNKSEGL------IGHALYPNPLRFKT 58
           + SF +  F   +  ++  +G A  + +G L +   ++         G ALY +P++   
Sbjct: 1   SVSFTFPNFWSDVEDSIIFQGDANTT-AGTLQLCKTNQYGTPLQWSAGRALYSDPVQLWD 59

Query: 59  SNKSVAIDFRTNFVFSILPKYPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTK 118
           +       F T F F +     +    GLAF +   +      A ++LGL N + +++  
Sbjct: 60  NKTESVASFYTEFTFFLKI-TGNGPADGLAFFLAPPDSDVK-DAGEYLGLFNKS-TATQP 116

Query: 119 FSTRMLAVEFDIIQNTELIDINDNHVGIDISSLISSASEPASYYSGNNHRIPILLRSGDP 178
              +++AVEFD   N    + +  H+GI+++S++S A++               + SG  
Sbjct: 117 SKNQVVAVEFDTWTNPNFPEPSYRHIGINVNSIVSVATKRWEDSD---------IFSGKI 167

Query: 179 IQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLITA-S 237
             A + Y     ++ V    L  P     ++S  +D+   + E +  G SASTG     +
Sbjct: 168 ATARISYDGSAEILTVV---LSYPDGSDYILSHSVDMRQNLPESVRVGISASTGNNQFLT 224

Query: 238 HNVHGWSIS 246
             +  W  S
Sbjct: 225 VYILSWRFS 233

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  181 bits (461), Expect = 4e-53
 Identities = 60/272 (22%), Positives = 111/272 (40%), Gaps = 30/272 (11%)

Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRI--GHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGW 395
           +G G F  VY+GL     +EVA   +     ++   + F  E   +  L+H N+V+ +  
Sbjct: 17  IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDS 76

Query: 396 C----RKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEE 451
                + +  ++LV + + +G+L   L        K++           I + L +LH  
Sbjct: 77  WESTVKGKKCIVLVTELMTSGTLKTYLKR-----FKVMKIKVLRSWCRQILKGLQFLH-T 130

Query: 452 CNQRVVHRDVKPSNILL-DTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRT 510
               ++HRD+K  NI +     + K+GD GLA +           ++GT  ++APE+   
Sbjct: 131 RTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS---FAKAVIGTPEFMAPEMYE- 186

Query: 511 GKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDY 570
            K   S DVY++G+ MLE+A         + AA++     V          +     +  
Sbjct: 187 EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIY--RRVTSGVKPASFDKVAIPEV-- 242

Query: 571 YDLAEAELVLNLGLFCSAPNPVYRPDMRRVVE 602
            ++ E          C   N   R  ++ ++ 
Sbjct: 243 KEIIEG---------CIRQNKDERYSIKDLLN 265

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  181 bits (461), Expect = 6e-53
 Identities = 64/295 (21%), Positives = 112/295 (37%), Gaps = 43/295 (14%)

Query: 336 NLVGSGGFGRVYRGLMPSL-----GLEVAIKRI-GHNSQQGMKEFVAEIMSMGRLRHRNL 389
             +G G FGRV++   P L        VA+K +    S     +F  E   M    + N+
Sbjct: 19  RDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNI 78

Query: 390 VQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKL-------------------RKLLT 430
           V+L G C     + L+++Y+  G L++ L                             L+
Sbjct: 79  VKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLS 138

Query: 431 WDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IYEHGA 489
             ++  I   +A  + YL E   ++ VHRD+   N L+   +  K+ DFGL++ IY    
Sbjct: 139 CAEQLCIARQVAAGMAYLSE---RKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADY 195

Query: 490 NPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVD 549
                +    + ++ PE     + TT +DV++YG+++ E+           A  E++   
Sbjct: 196 YKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVI--- 252

Query: 550 WVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL 604
                  +G I    +             + NL   C +  P  RP    +   L
Sbjct: 253 ---YYVRDGNILACPEN--------CPLELYNLMRLCWSKLPADRPSFCSIHRIL 296

>d1g9fa_ b.29.1.1 (A:) Legume lectin {Soybean (Glycine max) [TaxId: 3847]} Length = 251

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Soybean (Glycine max) [TaxId: 3847]

 Score =  180 bits (457), Expect = 6e-53
 Identities = 61/269 (22%), Positives = 114/269 (42%), Gaps = 34/269 (12%)

Query: 6   ADTTSFLYNGFL--HANLSLEGAAYISTSGILTVTNKSEGL------IGHALYPNPLRFK 57
           A+T SF +N F+    N+ L+G A +++SG L +    E        +G ALY  P+   
Sbjct: 1   AETVSFSWNKFVPKQPNMILQGDAIVTSSGKLQLNKVDENGTPKPSSLGRALYSTPIHIW 60

Query: 58  TSNKSVAIDFRTNFVFSILPKYPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSST 117
                    F  +F F+           GLAF +     P +       G   +   + +
Sbjct: 61  DKETGSVASFAASFNFTFYAPDTKRLADGLAFFL----APIDTKPQTHAGYLGLFNENES 116

Query: 118 KFSTRMLAVEFDIIQNTELIDINDNHVGIDISSLISSASEPASYYSGNNHRIPILLRSGD 177
               +++AVEFD  +N+   D  + H+GI+++S+ S                   L +  
Sbjct: 117 --GDQVVAVEFDTFRNSW--DPPNPHIGINVNSIRS------------IKTTSWDLANNK 160

Query: 178 PIQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLITA- 236
             +  + Y +   L+  S+  +   +    ++S  +DL + + E++  GFSA+TGL    
Sbjct: 161 VAKVLITYDASTSLLVASL--VYPSQRTSNILSDVVDLKTSLPEWVRIGFSAATGLDIPG 218

Query: 237 -SHNVHGWSISIGGKAQ--DLNPMKVPTL 262
            SH+V  WS +        +++P+ + + 
Sbjct: 219 ESHDVLSWSFASNLPHASSNIDPLDLTSF 247

>d2d3sa1 b.29.1.1 (A:1-237) Legume lectin {Winged bean (Psophocarpus tetragonolobus), basic agglutinin [TaxId: 3891]} Length = 237

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Winged bean (Psophocarpus tetragonolobus), basic agglutinin [TaxId: 3891]

 Score =  179 bits (455), Expect = 8e-53
 Identities = 65/253 (25%), Positives = 103/253 (40%), Gaps = 36/253 (14%)

Query: 8   TTSFLYNGFLH--ANLSLEGAAYISTSGILTVTNKSEGL-----IGHALYPNPLRFKTSN 60
           T SF +N F      L L+  A IS++ +L +T    G+      G ALY  P++   S 
Sbjct: 2   TISFNFNQFHQNEEQLKLQRDARISSNSVLELTKVVNGVPTWNSTGRALYAKPVQVWDST 61

Query: 61  KSVAIDFRTNFVFSILPKYPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTKFS 120
                 F T F FSI   +P           I+    +      + G+ N          
Sbjct: 62  TGNVASFETRFSFSIRQPFPRPHPADGLVFFIAPPNTQTGEGGGYFGIYNPLSPYPF--- 118

Query: 121 TRMLAVEFDIIQNTELIDINDNHVGIDISSLISSASEPASYYSGNNHRIPILLRSGDPIQ 180
              +AVEFD  +NT   D    H+GID++S+IS+              +P  L +G    
Sbjct: 119 ---VAVEFDTFRNTW--DPQIPHIGIDVNSVISTK------------TVPFTLDNGGIAN 161

Query: 181 AWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLI------ 234
             + Y +   +++V +    +       I+  +DL  V+ E +  GFSA+TG        
Sbjct: 162 VVIKYDASTKILHVVLVFPSLGTI--YTIADIVDLKQVLPESVNVGFSAATGDPSGKQRN 219

Query: 235 -TASHNVHGWSIS 246
            T +H++  WS S
Sbjct: 220 ATETHDILSWSFS 232

>d1f9ka_ b.29.1.1 (A:) Legume lectin {Winged bean (Psophocarpus tetragonolobus), acidic lectin [TaxId: 3891]} Length = 234

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Winged bean (Psophocarpus tetragonolobus), acidic lectin [TaxId: 3891]

 Score =  179 bits (455), Expect = 8e-53
 Identities = 64/254 (25%), Positives = 100/254 (39%), Gaps = 37/254 (14%)

Query: 7   DTTSFLYNGFLH--ANLSLEGAAYISTSGILTVTNKSEG------LIGHALYPNPLRFKT 58
           +T SF ++ F      L+L+  A I ++G+L +T  ++         G ALY  P++   
Sbjct: 1   ETQSFNFDHFEENSKELNLQRQASIKSNGVLELTKLTKNGVPVWKSTGRALYAEPIKIWD 60

Query: 59  SNKSVAIDFRTNFVFSILPKYPDL-GGQGLAFIIISTNRPENCLANQFLGLPNITMSSST 117
           S       F T F F+I   Y       GL F ++  N P         G          
Sbjct: 61  STTGNVASFETRFSFNITQPYAYPEPADGLTFFMVPPNSP-----QGEDGGNLGVFKPPE 115

Query: 118 KFSTRMLAVEFDIIQNTELIDINDNHVGIDISSLISSASEPASYYSGNNHRIPILLRSGD 177
             +    AVEFD  QNT   D    H+GID++S++SS +                L +G 
Sbjct: 116 GDNA--FAVEFDTFQNTW--DPQVPHIGIDVNSIVSSKTLHFQ------------LENGG 159

Query: 178 PIQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVI--DEYMYTGFSASTGLI- 234
                + Y S   ++NV +    V       +S  +DL       E++  G SA+TG   
Sbjct: 160 VANVVIKYDSPTKILNVVLAFHSVGTV--YTLSNIVDLKQEFPNSEWVNVGLSATTGYQK 217

Query: 235 --TASHNVHGWSIS 246
               +H +  WS +
Sbjct: 218 NAVETHEIISWSFT 231

>d1dbna_ b.29.1.1 (A:) Legume lectin {Maackia amurensis, leukoagglutinin [TaxId: 37501]} Length = 239

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Maackia amurensis, leukoagglutinin [TaxId: 37501]

 Score =  178 bits (451), Expect = 3e-52
 Identities = 68/254 (26%), Positives = 114/254 (44%), Gaps = 31/254 (12%)

Query: 6   ADTTSFLYNGFLH--ANLSLEGAAYISTSGILTVTNKSEG-----LIGHALYPNPLRFKT 58
           +D  SF  N F+   A+L  +G A +S++G+L +T    G      +G ALY  P+R   
Sbjct: 1   SDELSFTINNFVPNEADLLFQGEASVSSTGVLQLTKVENGQPQKYSVGRALYAAPVRIWG 60

Query: 59  SNKSVAIDFRTNFVFSILPKYPDLGGQGLAFIIISTN-RPENCLANQFLGLPNITMSSST 117
           +       F T+F F +    PD+   GLAF +   + +  +   +++LGL N + S S 
Sbjct: 61  NTTGSVASFSTSFTFVVKAPNPDITSDGLAFYLAPPDSQIPSGSVSKYLGLFNNSNSDS- 119

Query: 118 KFSTRMLAVEFDIIQNTEL--IDINDNHVGIDISSLISSASEPASYYSGNNHRIPIL-LR 174
             S +++AVEFD          D N  H+GID++ + S  +    + +G      I  L 
Sbjct: 120 --SNQIVAVEFDTYFAHSYDPWDPNYRHIGIDVNGIESIKTVQWDWINGGVAFATITYLA 177

Query: 175 SGDPIQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLI 234
               + A + Y                       ++  +DL  ++ E++  GFSA+TG  
Sbjct: 178 PNKTLIASLVYP---------------SNQTTFSVAASVDLKEILPEWVRVGFSAATGYP 222

Query: 235 TA--SHNVHGWSIS 246
           T   +H+V  WS +
Sbjct: 223 TEVETHDVLSWSFT 236

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  179 bits (456), Expect = 4e-52
 Identities = 71/285 (24%), Positives = 124/285 (43%), Gaps = 34/285 (11%)

Query: 335 QNLVGSGGFGRVYRGLMPSLGL--EVAIKRI-GHNSQQGMKEFVAEIMSMGRL-RHRNLV 390
           Q+++G G FG+V +  +   GL  + AIKR+  + S+   ++F  E+  + +L  H N++
Sbjct: 15  QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 74

Query: 391 QLHGWCRKQDELLLVYDYVPNGSLDKLL-----------FDKDHKLRKLLTWDQRYKILI 439
            L G C  +  L L  +Y P+G+L   L           F   +     L+  Q      
Sbjct: 75  NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 134

Query: 440 GIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGT 499
            +A+ + YL +   ++ +HRD+   NIL+     AK+ DFGL++  E     + T     
Sbjct: 135 DVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSRGQEV--YVKKTMGRLP 189

Query: 500 LGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGE 559
           + ++A E       TT++DV+SYG+L+ E+     +       AEL       E   +G 
Sbjct: 190 VRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELY------EKLPQGY 243

Query: 560 ITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL 604
             +              + V +L   C    P  RP   +++  L
Sbjct: 244 RLEKPLNC--------DDEVYDLMRQCWREKPYERPSFAQILVSL 280

>d1fx5a_ b.29.1.1 (A:) Legume lectin {Furze (Ulex europaeus), UEA-I [TaxId: 3902]} Length = 240

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Furze (Ulex europaeus), UEA-I [TaxId: 3902]

 Score =  177 bits (450), Expect = 4e-52
 Identities = 60/250 (24%), Positives = 97/250 (38%), Gaps = 25/250 (10%)

Query: 6   ADTTSFLYNGFLH--ANLSLEGAAYISTSGILTVTNKSEGL----IGHALYPNPLRFKTS 59
           +D  SF +  F     +LS +G A +  +G+L +      L     G A Y  P+     
Sbjct: 1   SDDLSFKFKNFSQNGKDLSFQGNASVIETGVLQLNKVGNNLPDETGGIARYIAPIHIWNC 60

Query: 60  NKSVAIDFRTNFVF-SILPKYPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTK 118
           N      F T+F F       P     GL F +   + P    A  + GL N T   S  
Sbjct: 61  NTGELASFITSFSFFMETSANPKAATDGLTFFLAPPDSPLR-RAGGYFGLFNDTKCDS-- 117

Query: 119 FSTRMLAVEFDIIQN-TELIDINDNHVGIDISSLISSASEPASYYSGNNHRIPILLRSGD 177
            S + +AVEFD I +     D    H+GID++ + S  +E  +   G            +
Sbjct: 118 -SYQTVAVEFDTIGSPVNFWDPGFPHIGIDVNCVKSINAERWNKRYG----------LNN 166

Query: 178 PIQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGL-ITA 236
                + Y +    +  S+            ++  +DL  ++ E++  GFS ST +   A
Sbjct: 167 VANVEIIYEASSKTLTASLTYPS--DQTSISVTSIVDLKEILPEWVSVGFSGSTYIGRQA 224

Query: 237 SHNVHGWSIS 246
           +H V  W  +
Sbjct: 225 THEVLNWYFT 234

>d1v6ia_ b.29.1.1 (A:) Legume lectin {Peanut (Arachis hypogaea) [TaxId: 3818]} Length = 232

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Peanut (Arachis hypogaea) [TaxId: 3818]

 Score =  177 bits (449), Expect = 5e-52
 Identities = 63/245 (25%), Positives = 103/245 (42%), Gaps = 23/245 (9%)

Query: 6   ADTTSFLYNGFLHAN--LSLEGAAYISTSGILTVTNKSEG-LIGHALYPNPLRFKTSNKS 62
           A+T SF +N F   N  ++ +G   + ++G + +TN ++   +G  LY  P+R  +S   
Sbjct: 1   AETVSFNFNSFSEGNPAINFQGDVTVLSNGNIQLTNLNKVNSVGRVLYAMPVRIWSSATG 60

Query: 63  VAIDFRTNFVFSILPKYPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTKFSTR 122
               F T+F F +          G+ F I   +      A    G       S TK +  
Sbjct: 61  NVASFLTSFSFEMKDIKDYDPADGIIFFIAPEDT--QIPAGSIGGGTL--GVSDTKGAGH 116

Query: 123 MLAVEFDIIQNTELIDINDNHVGIDISSLISSASEPASYYSGNNHRIPILLRSGDPIQAW 182
            + VEFD   N+E  D   +HVGID++S+ S  + P +  SG               +  
Sbjct: 117 FVGVEFDTYSNSEYNDPPTDHVGIDVNSVDSVKTVPWNSVSGAVV------------KVT 164

Query: 183 VDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLI-TASHNVH 241
           V Y S    ++V++            I+  +DL + + E +  GFSAS  L     H + 
Sbjct: 165 VIYDSSTKTLSVAVTN---DNGDITTIAQVVDLKAKLPERVKFGFSASGSLGGRQIHLIR 221

Query: 242 GWSIS 246
            WS +
Sbjct: 222 SWSFT 226

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  178 bits (452), Expect = 8e-52
 Identities = 66/278 (23%), Positives = 111/278 (39%), Gaps = 31/278 (11%)

Query: 334 EQNLVGSGGFGRVYRGLMP--SLGLEVAIKRI--GHNSQQGMKEFVAEIMSMGRLRHRNL 389
           E   +GSG FG V +G      +   VA+K +    N      E +AE   M +L +  +
Sbjct: 11  EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 70

Query: 390 VQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLH 449
           V++ G C   +  +LV +    G L+K L    H     +      +++  ++  + YL 
Sbjct: 71  VRMIGICE-AESWMLVMEMAELGPLNKYLQQNRH-----VKDKNIIELVHQVSMGMKYLE 124

Query: 450 EECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTT--HIVGTLGYLAPEL 507
                  VHRD+   N+LL T   AK+ DFGL+K      N      H    + + APE 
Sbjct: 125 ---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 181

Query: 508 TRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELL-LVDWVKELHLEGEITQAIDQ 566
               K ++ +DV+S+G+LM E     +        +E+  +++  + +       + +  
Sbjct: 182 INYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREM-- 239

Query: 567 TLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL 604
               YDL            C   +   RP    V   L
Sbjct: 240 ----YDLMNL---------CWTYDVENRPGFAAVELRL 264

>d1leda_ b.29.1.1 (A:) Legume lectin {West-central african legume (Griffonia simplicifolia) [TaxId: 3850]} Length = 243

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: West-central african legume (Griffonia simplicifolia) [TaxId: 3850]

 Score =  174 bits (443), Expect = 5e-51
 Identities = 55/252 (21%), Positives = 91/252 (36%), Gaps = 30/252 (11%)

Query: 7   DTTSFLYNGF------LHANLSLEGAAYISTSGILTVTNKSEG------LIGHALYPNPL 54
           +T +F Y  F          ++  G A     G L +T             G A Y  P+
Sbjct: 2   NTVNFTYPDFWSYSLKNGTEITFLGDATRI-PGALQLTKTDANGNPVRSSAGQASYSEPV 60

Query: 55  RFKTSNKSVAIDFRTNFVFSILPKYPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMS 114
               S    A  F T+F F +L  Y      GLAF +   +              + T +
Sbjct: 61  FLWDSTGKAA-SFYTSFTF-LLKNYGAPTADGLAFFLAPVDSSVKDYGGFLGLFRHETAA 118

Query: 115 SSTKFSTRMLAVEFDIIQNTELIDINDNHVGIDISSLISSASEPASYYSGNNHRIPILLR 174
             +K   +++AVEFD   N +  D    H+GID++S++S A+                  
Sbjct: 119 DPSKN--QVVAVEFDTWINKDWNDPPYPHIGIDVNSIVSVATTRWENDDAYG-------- 168

Query: 175 SGDPIQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLI 234
                 A + Y ++  ++ V    L        ++S  +DL+ V+ + +  GFSA  G  
Sbjct: 169 -SSIATAHITYDARSKILTVL---LSYEHGRDYILSHVVDLAKVLPQKVRIGFSAGVGY- 223

Query: 235 TASHNVHGWSIS 246
                +  W   
Sbjct: 224 DEVTYILSWHFF 235

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  175 bits (445), Expect = 5e-51
 Identities = 60/270 (22%), Positives = 103/270 (38%), Gaps = 24/270 (8%)

Query: 336 NLVGSGGFGRVYRGLMPSLGLEVAIKRI-GHNSQQGMKEFVAEIMSMGRLRHRNLVQLHG 394
             +G G +G V   +       VA+K +    +    +    EI     L H N+V+ +G
Sbjct: 11  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 70

Query: 395 WCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQ 454
             R+ +   L  +Y   G L   +          +      +    +   ++YLH     
Sbjct: 71  HRREGNIQYLFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLHG---I 122

Query: 455 RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTH-IVGTLGYLAPELTRTGK- 512
            + HRD+KP N+LLD   N K+ DFGLA ++ +    +  + + GTL Y+APEL +  + 
Sbjct: 123 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 182

Query: 513 ATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYYD 572
                DV+S GI++  +  G    +    + +       KE        + ID       
Sbjct: 183 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSD--WKEKKTYLNPWKKIDSAP--LA 238

Query: 573 LAEAELVLNLGLFCSAPNPVYRPDMRRVVE 602
           L                NP  R  +  + +
Sbjct: 239 LLHK---------ILVENPSARITIPDIKK 259

>d1g7ya_ b.29.1.1 (A:) Legume lectin {Horse gram (Dolichos biflorus), different isoforms [TaxId: 3840]} Length = 253

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Horse gram (Dolichos biflorus), different isoforms [TaxId: 3840]

 Score =  174 bits (441), Expect = 1e-50
 Identities = 61/263 (23%), Positives = 114/263 (43%), Gaps = 33/263 (12%)

Query: 6   ADTTSFLYNGFLHANLSLEGAAYISTSGILTVTNKSEG------LIGHALYPNPLRFKTS 59
           AD  SF +  F  ++  L+G A + +S  L +T            +G A Y +P++    
Sbjct: 1   ADIQSFSFKNFNSSSFILQGDATV-SSSKLRLTKVKGNGLPTLSSLGRAFYSSPIQIYDK 59

Query: 60  NKSVAIDFRTNFVFSILPKYPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTKF 119
           +      + T+F  +I          G+AF ++          + FLG+ +  +  +   
Sbjct: 60  STGAVASWATSFTANIFAPNKSSSADGIAFALVPVGSEPK-SNSGFLGVFDSDVYDN--- 115

Query: 120 STRMLAVEFDIIQNTELIDINDNHVGIDISSLISSASEPASYYSGNNHRIPILLRSGDPI 179
           S + +AVEFD   NT+  D    H+GID++S+ S                   L +G   
Sbjct: 116 SAQTVAVEFDTFSNTD-WDPTSRHIGIDVNSIKS------------IRTASWGLANGQNA 162

Query: 180 QAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGL---ITA 236
           +  + Y++   L+  S+  +   +    ++S  +D+++ + EY+  GFSA+TGL    T 
Sbjct: 163 EILITYNAATSLLVASL--VHPSRRTSYIVSERVDITNELPEYVSIGFSATTGLSEGYTE 220

Query: 237 SHNVHGWSIS----IGGKAQDLN 255
           +H+V  WS +         + L+
Sbjct: 221 THDVLSWSFASKLPDDSTTEPLD 243

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  176 bits (447), Expect = 1e-50
 Identities = 64/294 (21%), Positives = 111/294 (37%), Gaps = 42/294 (14%)

Query: 337 LVGSGGFGRVYRGLMPSLG-----LEVAIKRIGHNSQQGMKE-FVAEIMSMGRL-RHRNL 389
           ++GSG FG+V       +      ++VA+K +   +    +E  ++E+  M +L  H N+
Sbjct: 44  VLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENI 103

Query: 390 VQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKL------------------RKLLTW 431
           V L G C     + L+++Y   G L   L  K  K                     +LT+
Sbjct: 104 VNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTF 163

Query: 432 DQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IYEHGAN 490
           +        +A+ + +L     +  VHRD+   N+L+      K+ DFGLA+ I      
Sbjct: 164 EDLLCFAYQVAKGMEFLEF---KSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNY 220

Query: 491 PQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDW 550
               +    + ++APE    G  T  +DV+SYGIL+ E+     +  P            
Sbjct: 221 VVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLI 280

Query: 551 VKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL 604
                ++                   E +  +   C A +   RP    +  FL
Sbjct: 281 QNGFKMD-------------QPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFL 321

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  174 bits (442), Expect = 2e-50
 Identities = 64/276 (23%), Positives = 117/276 (42%), Gaps = 29/276 (10%)

Query: 338 VGSGGFGRVYRGLMPSL---GLEVAIKRI---GHNSQQGMKEFVAEIMSMGRLRHRNLVQ 391
           +G G FG V RG   +     + VA+K +     +  + M +F+ E+ +M  L HRNL++
Sbjct: 16  LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75

Query: 392 LHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEE 451
           L+G       + +V +  P GSL     D+  K +         +  + +A+ + YL   
Sbjct: 76  LYGVVL-TPPMKMVTELAPLGSL----LDRLRKHQGHFLLGTLSRYAVQVAEGMGYLES- 129

Query: 452 CNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANP--QTTHIVGTLGYLAPELTR 509
             +R +HRD+   N+LL T    K+GDFGL +      +      H      + APE  +
Sbjct: 130 --KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 187

Query: 510 TGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLD 569
           T   + ++D + +G+ + E+    +        +++L    + +        +   Q + 
Sbjct: 188 TRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQIL--HKIDKEGERLPRPEDCPQDI- 244

Query: 570 YYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL 605
                      N+ + C A  P  RP    + +FLL
Sbjct: 245 ----------YNVMVQCWAHKPEDRPTFVALRDFLL 270

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  175 bits (445), Expect = 2e-50
 Identities = 62/278 (22%), Positives = 113/278 (40%), Gaps = 29/278 (10%)

Query: 335 QNLVGSGGFGRVYRGLMPSL---GLEVAIKRIGHNSQQG-MKEFVAEIMSMGRLRHRNLV 390
             ++G G FG VY G +       +  A+K +   +  G + +F+ E + M    H N++
Sbjct: 32  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 91

Query: 391 QLHGWC-RKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLH 449
            L G C R +   L+V  Y+ +G L   + ++ H      T        + +A+    + 
Sbjct: 92  SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP----TVKDLIGFGLQVAK---GMK 144

Query: 450 EECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHG---ANPQTTHIVGTLGYLAPE 506
              +++ VHRD+   N +LD     K+ DFGLA+        +    T     + ++A E
Sbjct: 145 FLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 204

Query: 507 LTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQ 566
             +T K TT +DV+S+G+L+ E+        P     ++ +        L+ E       
Sbjct: 205 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYC----- 259

Query: 567 TLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL 604
                     + +  + L C  P    RP    +V  +
Sbjct: 260 ---------PDPLYEVMLKCWHPKAEMRPSFSELVSRI 288

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  174 bits (443), Expect = 3e-50
 Identities = 59/290 (20%), Positives = 106/290 (36%), Gaps = 37/290 (12%)

Query: 336 NLVGSGGFGRVYRGLMPSL-----GLEVAIKRIGHNSQQGMKE-FVAEIMSMGRL-RHRN 388
             +G+G FG+V       L      + VA+K +  ++    +E  ++E+  +  L  H N
Sbjct: 29  KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMN 88

Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKL-------------RKLLTWDQRY 435
           +V L G C      L++ +Y   G L   L  K                    L  +   
Sbjct: 89  IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 148

Query: 436 KILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IYEHGANPQTT 494
                +A+ + +L     +  +HRD+   NILL      K+ DFGLA+ I          
Sbjct: 149 SFSYQVAKGMAFLAS---KNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKG 205

Query: 495 HIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKEL 554
           +    + ++APE       T  +DV+SYGI + E+     S  P             +  
Sbjct: 206 NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGF 265

Query: 555 HLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL 604
            +                      + ++   C   +P+ RP  +++V+ +
Sbjct: 266 RML-------------SPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLI 302

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  173 bits (438), Expect = 6e-50
 Identities = 69/300 (23%), Positives = 127/300 (42%), Gaps = 42/300 (14%)

Query: 310 DWEIQCGARRFKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSL---GLEVAIKRIGHN 366
           D+EIQ    R +  EL            +G G FG V++G+  S     L VAIK   + 
Sbjct: 1   DYEIQ----RERI-EL---------GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNC 46

Query: 367 SQQGMKE-FVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKL 425
           +   ++E F+ E ++M +  H ++V+L G    ++ + ++ +    G L   L  + + L
Sbjct: 47  TSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSL 105

Query: 426 RKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIY 485
                          ++ +L YL     +R VHRD+   N+L+ +    KLGDFGL++  
Sbjct: 106 ----DLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 158

Query: 486 EHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEV-ACGRRSIEPQKAAAE 544
           E     + +     + ++APE     + T+++DV+ +G+ M E+   G +  +  K    
Sbjct: 159 EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV 218

Query: 545 LLLVDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL 604
           +  ++  + L +       +      Y L            C A +P  RP    +   L
Sbjct: 219 IGRIENGERLPMPPNCPPTL------YSLMTK---------CWAYDPSRRPRFTELKAQL 263

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score =  174 bits (443), Expect = 9e-50
 Identities = 55/200 (27%), Positives = 96/200 (48%), Gaps = 11/200 (5%)

Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWC 396
            +G+G FG V+R    + G   A K +    +   +    EI +M  LRH  LV LH   
Sbjct: 33  ELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAF 92

Query: 397 RKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRV 456
              +E++++Y+++  G L + + D+ +K    ++ D+  + +  + + L ++HE      
Sbjct: 93  EDDNEMVMIYEFMSGGELFEKVADEHNK----MSEDEAVEYMRQVCKGLCHMHE---NNY 145

Query: 457 VHRDVKPSNILLDTYLN--AKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKAT 514
           VH D+KP NI+  T  +   KL DFGL    +   + + T   GT  + APE+       
Sbjct: 146 VHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT--GTAEFAAPEVAEGKPVG 203

Query: 515 TSTDVYSYGILMLEVACGRR 534
             TD++S G+L   +  G  
Sbjct: 204 YYTDMWSVGVLSYILLSGLS 223

>d1ukga_ b.29.1.1 (A:) Legume lectin {Bloodwood tree (Pterocarpus angolensis) [TaxId: 182271]} Length = 241

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Bloodwood tree (Pterocarpus angolensis) [TaxId: 182271]

 Score =  170 bits (432), Expect = 2e-49
 Identities = 53/250 (21%), Positives = 97/250 (38%), Gaps = 27/250 (10%)

Query: 7   DTTSFLYNGFL--HANLSLEGAAYISTSGILTVTNKSEG------LIGHALYPNPLRFKT 58
           D+ SF +  F     NL  +G A I  +  + +T            +G  L+   +    
Sbjct: 2   DSLSFGFPTFPSDQKNLIFQGDAQI-KNNAVQLTKTDSNGNPVASTVGRILFSAQVHLWE 60

Query: 59  SNKSVAIDFRTNFVFSILPKYPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTK 118
            + S   +F++ F FS+     +       FI        +      LGL     + +T 
Sbjct: 61  KSSSRVANFQSQFSFSLKSPLSNGADGIAFFIAPPDTTIPSGSGGGLLGLFAPGTAQNT- 119

Query: 119 FSTRMLAVEFDIIQNTEL--IDINDNHVGIDISSLISSASEPASYYSGNNHRIPILLRSG 176
            + +++AVEFD     +    D N  H+GID++S+ S  +       G +          
Sbjct: 120 SANQVIAVEFDTFYAQDSNTWDPNYPHIGIDVNSIRSVKTVKWDRRDGQSL--------- 170

Query: 177 DPIQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLITA 236
                 V ++     ++V           R  +S  +D+ SV+ E++  GFSA++G    
Sbjct: 171 ---NVLVTFNPSTRNLDVV---ATYSDGTRYEVSYEVDVRSVLPEWVRVGFSAASGEQYQ 224

Query: 237 SHNVHGWSIS 246
           +H +  WS +
Sbjct: 225 THTLESWSFT 234

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  172 bits (436), Expect = 3e-49
 Identities = 63/311 (20%), Positives = 121/311 (38%), Gaps = 43/311 (13%)

Query: 309 EDWEIQCGARRFKYAELASVTKGFGEQNLVGSGGFGRVYRGLMPSL-----GLEVAIKRI 363
           ++WE+     +               +  +G G FG VY G+   +        VAIK +
Sbjct: 13  DEWEVA--REKIT----------MSRE--LGQGSFGMVYEGVAKGVVKDEPETRVAIKTV 58

Query: 364 GHN-SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKD 422
               S +   EF+ E   M      ++V+L G   +    L++ + +  G L   L    
Sbjct: 59  NEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLR 118

Query: 423 HKLRKL-----LTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLG 477
             +         +  +  ++   IA  + YL      + VHRD+   N ++      K+G
Sbjct: 119 PAMANNPVLAPPSLSKMIQMAGEIADGMAYL---NANKFVHRDLAARNCMVAEDFTVKIG 175

Query: 478 DFGLAK-IYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSI 536
           DFG+ + IYE     +    +  + +++PE  + G  TT +DV+S+G+++ E+A      
Sbjct: 176 DFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP 235

Query: 537 EPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPD 596
               +  ++L         +EG +    D           +++  L   C   NP  RP 
Sbjct: 236 YQGLSNEQVL------RFVMEGGLLDKPDNC--------PDMLFELMRMCWQYNPKMRPS 281

Query: 597 MRRVVEFLLGD 607
              ++  +  +
Sbjct: 282 FLEIISSIKEE 292

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  171 bits (435), Expect = 5e-49
 Identities = 69/325 (21%), Positives = 128/325 (39%), Gaps = 30/325 (9%)

Query: 332 FGEQNLVGSGGFGRVYRGLMPSLG----LEVAIKRI-GHNSQQGMKEFVAEIMSMGRLRH 386
           F +  ++GSG FG VY+GL    G    + VAIK +    S +  KE + E   M  + +
Sbjct: 11  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 70

Query: 387 RNLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLL 446
            ++ +L G C     + L+   +P G L     D   + +  +         + IA+ + 
Sbjct: 71  PHVCRLLGICL-TSTVQLITQLMPFGCL----LDYVREHKDNIGSQYLLNWCVQIAKGMN 125

Query: 447 YLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IYEHGANPQTTHIVGTLGYLAP 505
           YL    ++R+VHRD+   N+L+ T  + K+ DFGLAK +               + ++A 
Sbjct: 126 YL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 182

Query: 506 ELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELL-LVDWVKELHLEGEITQAI 564
           E       T  +DV+SYG+ + E+            A+E+  +++  + L      T   
Sbjct: 183 ESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTID- 241

Query: 565 DQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLGDSSLPPLPPDIHLKDTRN 624
                         V  + + C   +   RP  R ++      +  P     I   +  +
Sbjct: 242 --------------VYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQGDERMH 287

Query: 625 IMGFSDFPNDSDFFNSKLMSSQSNS 649
           +   +D        + + M    ++
Sbjct: 288 LPSPTDSNFYRALMDEEDMDDVVDA 312

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score =  172 bits (436), Expect = 8e-49
 Identities = 68/304 (22%), Positives = 119/304 (39%), Gaps = 28/304 (9%)

Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWC 396
            +GSG FG V+R +  + G     K I             EI  M +L H  L+ LH   
Sbjct: 36  ELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAF 95

Query: 397 RKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRV 456
             + E++L+ +++  G L   +  +D+K    ++  +    +    + L ++HE     +
Sbjct: 96  EDKYEMVLILEFLSGGELFDRIAAEDYK----MSEAEVINYMRQACEGLKHMHE---HSI 148

Query: 457 VHRDVKPSNILLDTYLNA--KLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKAT 514
           VH D+KP NI+ +T   +  K+ DFGLA       +        T  + APE+       
Sbjct: 149 VHLDIKPENIMCETKKASSVKIIDFGLATKLNP--DEIVKVTTATAEFAAPEIVDREPVG 206

Query: 515 TSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYYDLA 574
             TD+++ G+L   +  G     P     +L  +  VK    E +       + +  D  
Sbjct: 207 FYTDMWAIGVLGYVLLSGLS---PFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFI 263

Query: 575 EAELVLNLGLFCSAPNPVYRPDMRRVVE--FLLGD-SSLPPLPPDIHLKDTRNIM--GFS 629
           +               P  R  +   +E  +L GD S+L    P       R  +   ++
Sbjct: 264 KN---------LLQKEPRKRLTVHDALEHPWLKGDHSNLTSRIPSSRYNKIRQKIKEKYA 314

Query: 630 DFPN 633
           D+P 
Sbjct: 315 DWPA 318

>d1fnya_ b.29.1.1 (A:) Legume lectin {Black locust (Robinia pseudoacacia) [TaxId: 35938]} Length = 237

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Black locust (Robinia pseudoacacia) [TaxId: 35938]

 Score =  167 bits (424), Expect = 2e-48
 Identities = 59/250 (23%), Positives = 103/250 (41%), Gaps = 29/250 (11%)

Query: 7   DTTSFLYNGFLH--ANLSLEGAAYISTSGILTVTNKSEGL-----IGHALYPNPLRFKTS 59
            + SF +  F      L  +G A ++++G+L +TN   G+     +G ALY  P +   S
Sbjct: 2   GSLSFSFPKFAPNQPYLINQGDALVTSTGVLQLTNVVNGVPSSKSLGRALYAAPFQIWDS 61

Query: 60  NKSVAIDFRTNFVFSILPKYPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTKF 119
                  F T+F F I    P     GLAF +   +          LG+           
Sbjct: 62  TTGNVASFVTSFTFIIQAPNPATTADGLAFFLAPVDTQPLD-LGGMLGIFK---DGYFNK 117

Query: 120 STRMLAVEFDIIQNTELIDINDNHVGIDISSLISSASEPASYYSGNNHRIPILLRSGDPI 179
           S +++AVEFD   N +  D    H+GI+++S+ S  + P ++ +G               
Sbjct: 118 SNQIVAVEFDTFSNGDW-DPKGRHLGINVNSIESIKTVPWNWTNGEVA------------ 164

Query: 180 QAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLITAS-- 237
             ++ Y +    +  S+           +I   +D+  V+ E++  GFSA+TG+      
Sbjct: 165 NVFISYEASTKSLTASLVYPS--LETSFIIDAIVDVKIVLPEWVRFGFSATTGIDKGYVQ 222

Query: 238 -HNVHGWSIS 246
            ++V  WS  
Sbjct: 223 TNDVLSWSFE 232

>d1n47a_ b.29.1.1 (A:) Legume lectin {Hairy vetch (Vicia villosa), isolectin b4 [TaxId: 3911]} Length = 233

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Hairy vetch (Vicia villosa), isolectin b4 [TaxId: 3911]

 Score =  167 bits (423), Expect = 2e-48
 Identities = 62/250 (24%), Positives = 105/250 (42%), Gaps = 32/250 (12%)

Query: 7   DTTSFLYNGFL--HANLSLEGAAYISTSGILTVTNKSEGL-----IGHALYPNPLRFKTS 59
           ++TSF +  F     NL L+  A ++++G L +T  + G      +G ALY  P+     
Sbjct: 2   ESTSFSFTNFNPNQNNLILQEDALVNSAGTLELTAVAAGAPVPDSLGRALYAAPIHIH-- 59

Query: 60  NKSVAIDFRTNFVFSILPKYPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTKF 119
           + +    F T+F F +          GLAF +   +         FLGL       +   
Sbjct: 60  DNTTLASFTTSFSFVMAAPAAAAVADGLAFFLAPPDTQPQA-RGGFLGLFA---DRAHDA 115

Query: 120 STRMLAVEFDIIQNTELIDINDNHVGIDISSLISSASEPASYYSGNNHRIPILLRSGDPI 179
           S + +AVEFD   N    D N  H+GID + + S  +             P  +  G+  
Sbjct: 116 SYQTVAVEFDTYSNAW--DPNYTHIGIDTNGIESKKT------------TPFDMVYGEKA 161

Query: 180 QAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGL---ITA 236
              + Y +    +  S+  +         +S  +DL  ++ EY+  GFSA+TGL   +  
Sbjct: 162 NIVITYQASTKALAASL--VFPVSQTSYAVSARVDLRDILPEYVRVGFSATTGLNAGVVE 219

Query: 237 SHNVHGWSIS 246
           +H++  WS +
Sbjct: 220 THDIVSWSFA 229

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  167 bits (423), Expect = 2e-47
 Identities = 49/203 (24%), Positives = 84/203 (41%), Gaps = 12/203 (5%)

Query: 336 NLVGSGGFGRVYRGLMPSLGLEVAIKRI---GHNSQQGMKEFVAEIMSMGRLRHRNLVQL 392
            ++G G F  V      +   E AIK +       +  +     E   M RL H   V+L
Sbjct: 14  KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 73

Query: 393 HGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEEC 452
           +   +  ++L     Y  NG L K +                       A+ +  L    
Sbjct: 74  YFTFQDDEKLYFGLSYAKNGELLKYIRKIGS-----FDETC---TRFYTAEIVSALEYLH 125

Query: 453 NQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEH-GANPQTTHIVGTLGYLAPELTRTG 511
            + ++HRD+KP NILL+  ++ ++ DFG AK+        +    VGT  Y++PEL    
Sbjct: 126 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEK 185

Query: 512 KATTSTDVYSYGILMLEVACGRR 534
            A  S+D+++ G ++ ++  G  
Sbjct: 186 SACKSSDLWALGCIIYQLVAGLP 208

>d1ioaa_ b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris), G02771, arcelin-5a [TaxId: 3885]} Length = 228

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Phytohemagglutinin-L, PHA-L, also arcelin
species: Kidney bean (Phaseolus vulgaris), G02771, arcelin-5a [TaxId: 3885]

 Score =  162 bits (410), Expect = 1e-46
 Identities = 65/251 (25%), Positives = 101/251 (40%), Gaps = 37/251 (14%)

Query: 6   ADTTSFLYNGFLH-ANLSLEGAAYISTSGILTVTNKSEGL------IGHALYPNPLRFKT 58
           A  TSF +  F     L L+G A IS+ G L +T            +G A Y +P++ K 
Sbjct: 1   ATETSFNFPNFHTDDKLILQGNATISSKGQLQLTGVGSNELPRVDSLGRAFYSDPIQIKD 60

Query: 59  SNKSVAIDFRTNFVFSILPKYPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTK 118
           SN      F TNF F I  K   +   GLAF ++  N P      +FLG+ N        
Sbjct: 61  SNN--VASFNTNFTFIIRAKNQSISAYGLAFALVPVNSPPQ-KKQEFLGIFNTNNPEP-- 115

Query: 119 FSTRMLAVEFDIIQNTELIDINDNHVGIDISSLISSASEPASYYSGNNHRIPILLRSGDP 178
            + R +AV F+  +N   ID + N +   ++                         +G+ 
Sbjct: 116 -NARTVAVVFNTFKNR--IDFDKNFIKPYVNENCD-----------------FHKYNGEK 155

Query: 179 IQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGL---IT 235
               + Y S    + V +         +  +S  + L   +DE++  GFS ++GL    T
Sbjct: 156 TDVQITYDSSNNDLRVFLHFTV--SQVKCSVSATVHLEKEVDEWVSVGFSPTSGLTEDTT 213

Query: 236 ASHNVHGWSIS 246
            +H+V  WS S
Sbjct: 214 ETHDVLSWSFS 224

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  161 bits (408), Expect = 2e-45
 Identities = 65/290 (22%), Positives = 120/290 (41%), Gaps = 38/290 (13%)

Query: 336 NLVGSGGFGRVYRGLMPSL-------GLEVAIKRI-GHNSQQGMKEFVAEIMSMGRL-RH 386
             +G G FG+V       L         +VA+K +    +++ + + ++E+  M  + +H
Sbjct: 19  KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 78

Query: 387 RNLVQLHGWCRKQDELLLVYDYVPNGSLDKLL-----------FDKDHKLRKLLTWDQRY 435
           +N++ L G C +   L ++ +Y   G+L + L           ++  H   + L+     
Sbjct: 79  KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 138

Query: 436 KILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTH 495
                +A+ + YL     ++ +HRD+   N+L+      K+ DFGLA+   H    + T 
Sbjct: 139 SCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 195

Query: 496 -IVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKEL 554
                + ++APE       T  +DV+S+G+L+ E+     S  P     EL     +KE 
Sbjct: 196 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF--KLLKE- 252

Query: 555 HLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL 604
                        +D       EL   +   C    P  RP  +++VE L
Sbjct: 253 ----------GHRMDKPSNCTNELY-MMMRDCWHAVPSQRPTFKQLVEDL 291

>d1dhkb_ b.29.1.1 (B:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 204

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Phytohemagglutinin-L, PHA-L, also arcelin
species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]

 Score =  155 bits (393), Expect = 2e-44
 Identities = 52/244 (21%), Positives = 92/244 (37%), Gaps = 46/244 (18%)

Query: 6   ADTTSFLYNGFLHANLSLEGAAYISTSGILTVTNKSEGLIGHALYPNPLRFKTSNKSVAI 65
           A  TSF+ + F   NL L+G A +S++G L ++  S   +  A Y  P++ + S      
Sbjct: 1   ATETSFIIDAFNKTNLILQGDATVSSNGNLQLSYNSYDSMSRAFYSAPIQIRDSTTGNVA 60

Query: 66  DFRTNFVFSILPKYPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTKFSTRMLA 125
            F TNF  +I          GL F++                     +    +     + 
Sbjct: 61  SFDTNFTMNIRTHRQANSAVGLDFVL---------------------VPVQPESKGDTVT 99

Query: 126 VEFDIIQNTELIDINDNHVGIDISSLISSASEPASYYSGNNHRIPILLRSGDPIQAWVDY 185
           VEFD   +   ID+N+N +                     +    +    G   +  + Y
Sbjct: 100 VEFDTFLSRISIDVNNNDI--------------------KSVPWDVHDYDGQNAEVRITY 139

Query: 186 SSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLITAS---HNVHG 242
           +S   + +VS+            +S  ++L   + +++  GFSA++G    S   H+V  
Sbjct: 140 NSSTKVFSVSLSNPS--TGKSNNVSTTVELEKEVYDWVSVGFSATSGAYQWSYETHDVLS 197

Query: 243 WSIS 246
           WS S
Sbjct: 198 WSFS 201

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  158 bits (401), Expect = 2e-44
 Identities = 63/283 (22%), Positives = 116/283 (40%), Gaps = 28/283 (9%)

Query: 335 QNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKE-FVAEIMSMGRLRHRNLVQLH 393
           ++++G+G F  V           VAIK I   + +G +     EI  + +++H N+V L 
Sbjct: 14  RDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALD 73

Query: 394 GWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECN 453
                   L L+   V  G L   + +K        T     +++  +  ++ YLH+   
Sbjct: 74  DIYESGGHLYLIMQLVSGGELFDRIVEK-----GFYTERDASRLIFQVLDAVKYLHDLG- 127

Query: 454 QRVVHRDVKPSNILL---DTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRT 510
             +VHRD+KP N+L    D      + DFGL+K+ + G     +   GT GY+APE+   
Sbjct: 128 --IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG--SVLSTACGTPGYVAPEVLAQ 183

Query: 511 GKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDY 570
              + + D +S G++   + CG     P     +  L + + +   E +     D +   
Sbjct: 184 KPYSKAVDCWSIGVIAYILLCGYP---PFYDENDAKLFEQILKAEYEFDSPYWDDISDSA 240

Query: 571 YDLAEAELVLNLGLFCSAPNPVYRPDMRRVVE--FLLGDSSLP 611
            D                 +P  R    + ++  ++ GD++L 
Sbjct: 241 KDFIRH---------LMEKDPEKRFTCEQALQHPWIAGDTALD 274

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score =  155 bits (394), Expect = 1e-43
 Identities = 63/284 (22%), Positives = 110/284 (38%), Gaps = 38/284 (13%)

Query: 335 QNLVGSGGFGRVYRGLMPSLGLEVAIKRI---------GHNSQQGMKEFVAEIMSMGRLR 385
           + ++G G    V R +      E A+K I             Q+  +  + E+  + ++ 
Sbjct: 8   KEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVS 67

Query: 386 -HRNLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQS 444
            H N++QL           LV+D +  G L   L +K       L+  +  KI+  + + 
Sbjct: 68  GHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT-----LSEKETRKIMRALLEV 122

Query: 445 LLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLA 504
           +  LH+     +VHRD+KP NILLD  +N KL DFG +   + G   +   + GT  YLA
Sbjct: 123 ICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE--KLREVCGTPSYLA 177

Query: 505 PELTRTGKA------TTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEG 558
           PE+                D++S G++M  +  G     P     ++L++  +   + + 
Sbjct: 178 PEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSP---PFWHRKQMLMLRMIMSGNYQF 234

Query: 559 EITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVE 602
              +  D +    DL                 P  R      + 
Sbjct: 235 GSPEWDDYSDTVKDLVSR---------FLVVQPQKRYTAEEALA 269

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  157 bits (397), Expect = 1e-43
 Identities = 45/200 (22%), Positives = 87/200 (43%), Gaps = 12/200 (6%)

Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWC 396
            +G G FG V+R +  S       K +             EI  +   RHRN++ LH   
Sbjct: 12  DLGRGEFGIVHRCVETSSKKTYMAKFV-KVKGTDQVLVKKEISILNIARHRNILHLHESF 70

Query: 397 RKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRV 456
              +EL+++++++    + + +    +     L   +    +  + ++L +LH      +
Sbjct: 71  ESMEELVMIFEFISGLDIFERI----NTSAFELNEREIVSYVHQVCEALQFLHS---HNI 123

Query: 457 VHRDVKPSNILLDT--YLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKAT 514
            H D++P NI+  T      K+ +FG A+  + G N +         Y APE+ +    +
Sbjct: 124 GHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLF--TAPEYYAPEVHQHDVVS 181

Query: 515 TSTDVYSYGILMLEVACGRR 534
           T+TD++S G L+  +  G  
Sbjct: 182 TATDMWSLGTLVYVLLSGIN 201

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  154 bits (390), Expect = 6e-43
 Identities = 66/289 (22%), Positives = 114/289 (39%), Gaps = 36/289 (12%)

Query: 336 NLVGSGGFGRVYRGLMPSL-----GLEVAIKRIGHNSQQG-MKEFVAEIMSMGR-LRHRN 388
             +G G FG+V       +        VA+K +   +     +  ++E+  +     H N
Sbjct: 19  KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 78

Query: 389 LVQLHGWCRKQDE-LLLVYDYVPNGSLDKLLFDKDHKL-----------RKLLTWDQRYK 436
           +V L G C K    L+++ ++   G+L   L  K ++            +  LT +    
Sbjct: 79  VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 138

Query: 437 ILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK-IYEHGANPQTTH 495
               +A+ + +L     ++ +HRD+   NILL      K+ DFGLA+ IY+     +   
Sbjct: 139 YSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 195

Query: 496 IVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELH 555
               L ++APE       T  +DV+S+G+L+ E+     S  P      + + +      
Sbjct: 196 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP-----GVKIDEEFCRRL 250

Query: 556 LEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL 604
            EG   +A D T           +    L C    P  RP    +VE L
Sbjct: 251 KEGTRMRAPDYT--------TPEMYQTMLDCWHGEPSQRPTFSELVEHL 291

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  153 bits (387), Expect = 1e-42
 Identities = 52/209 (24%), Positives = 91/209 (43%), Gaps = 17/209 (8%)

Query: 335 QNLVGSGGFGRVYRGLMPSLGLEVAIKRI---GHNSQQGMKEFVAEIMSMGRLRHRNLVQ 391
             ++G GG   V+      L  +VA+K +             F  E  +   L H  +V 
Sbjct: 12  GEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVA 71

Query: 392 LHGWCRKQDE----LLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLY 447
           ++     +        +V +YV   +L  ++  +       +T  +  +++    Q+L +
Sbjct: 72  VYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP-----MTPKRAIEVIADACQALNF 126

Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANP--QTTHIVGTLGYLAP 505
            H+     ++HRDVKP+NI++      K+ DFG+A+      N   QT  ++GT  YL+P
Sbjct: 127 SHQ---NGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSP 183

Query: 506 ELTRTGKATTSTDVYSYGILMLEVACGRR 534
           E  R       +DVYS G ++ EV  G  
Sbjct: 184 EQARGDSVDARSDVYSLGCVLYEVLTGEP 212

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  152 bits (386), Expect = 6e-42
 Identities = 66/324 (20%), Positives = 128/324 (39%), Gaps = 38/324 (11%)

Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRL-RHRNLVQLHGW 395
           ++G G  G+V +        + A+K +     Q   +   E+    R  +  ++V++   
Sbjct: 19  VLGLGINGKVLQIFNKRTQEKFALKML-----QDCPKARREVELHWRASQCPHIVRIVDV 73

Query: 396 CR----KQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEE 451
                  +  LL+V + +  G L   + D+     +  T  +  +I+  I +++ YLH  
Sbjct: 74  YENLYAGRKCLLIVMECLDGGELFSRIQDRGD---QAFTEREASEIMKSIGEAIQYLHS- 129

Query: 452 CNQRVVHRDVKPSNILLDTYLN---AKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELT 508
               + HRDVKP N+L  +       KL DFG AK      +  T     T  Y+APE+ 
Sbjct: 130 --INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY--TPYYVAPEVL 185

Query: 509 RTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTL 568
              K   S D++S G++M  + CG     P  +   L +   +K     G+      +  
Sbjct: 186 GPEKYDKSCDMWSLGVIMYILLCGYP---PFYSNHGLAISPGMKTRIRMGQYEFPNPEWS 242

Query: 569 DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVE--FLLGDSSLP--PLPPDIHLKDTRN 624
           +  +  +  L+ N         P  R  +   +   +++  + +P  PL     LK+ + 
Sbjct: 243 EVSEEVK-MLIRN----LLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLKEDK- 296

Query: 625 IMGFSDFPNDSDFFNSKLMSSQSN 648
                 + +  +   S L + + +
Sbjct: 297 ----ERWEDVKEEMTSALATMRVD 316

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  153 bits (387), Expect = 7e-42
 Identities = 53/233 (22%), Positives = 91/233 (39%), Gaps = 18/233 (7%)

Query: 332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRI------GHNSQQGMKEFVAEIMSMGRLR 385
           F    ++G GGFG VY       G   A+K +          +         +  +    
Sbjct: 6   FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 65

Query: 386 HRNLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSL 445
              +V +       D+L  + D +  G L   L           +          I   L
Sbjct: 66  CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVF-----SEADMRFYAAEIILGL 120

Query: 446 LYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAP 505
            ++H    + VV+RD+KP+NILLD + + ++ D GLA  +      +    VGT GY+AP
Sbjct: 121 EHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK---KPHASVGTHGYMAP 174

Query: 506 ELTRTGKA-TTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLE 557
           E+ + G A  +S D +S G ++ ++  G       K   +  +      + +E
Sbjct: 175 EVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVE 227

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  151 bits (383), Expect = 1e-41
 Identities = 50/204 (24%), Positives = 86/204 (42%), Gaps = 13/204 (6%)

Query: 335 QNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN---SQQGMKEFVAEIMSMGR-LRHRNLV 390
             ++G G FG+V+           AIK +  +       ++  + E   +     H  L 
Sbjct: 7   HKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLT 66

Query: 391 QLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHE 450
            +    + ++ L  V +Y+  G L   +              +       I   L +LH 
Sbjct: 67  HMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHK-----FDLSRATFYAAEIILGLQFLHS 121

Query: 451 ECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRT 510
              + +V+RD+K  NILLD   + K+ DFG+ K    G + +T    GT  Y+APE+   
Sbjct: 122 ---KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLG-DAKTNTFCGTPDYIAPEILLG 177

Query: 511 GKATTSTDVYSYGILMLEVACGRR 534
            K   S D +S+G+L+ E+  G+ 
Sbjct: 178 QKYNHSVDWWSFGVLLYEMLIGQS 201

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  151 bits (382), Expect = 2e-41
 Identities = 60/210 (28%), Positives = 96/210 (45%), Gaps = 9/210 (4%)

Query: 328 VTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGM-KEFVAEIMSMGRLRH 386
           V   +   + +G G +G V         + VAIK+I     Q   +  + EI  + R RH
Sbjct: 6   VGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRH 65

Query: 387 RNLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLL 446
            N++ ++   R      +   Y+    +   L+       + L+ D     L  I + L 
Sbjct: 66  ENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLK--TQHLSNDHICYFLYQILRGLK 123

Query: 447 YLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIY--EHGANPQTTHIVGTLGYLA 504
           Y+H      V+HRD+KPSN+LL+T  + K+ DFGLA++   +H      T  V T  Y A
Sbjct: 124 YIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 180

Query: 505 PELTRTGKATT-STDVYSYGILMLEVACGR 533
           PE+    K  T S D++S G ++ E+   R
Sbjct: 181 PEIMLNSKGYTKSIDIWSVGCILAEMLSNR 210

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  150 bits (379), Expect = 3e-41
 Identities = 71/335 (21%), Positives = 118/335 (35%), Gaps = 51/335 (15%)

Query: 336 NLVGSGGFGRVYRGLMPSLGLEVAIKRI---GHNSQQGMKEFVAEIMSMGRLRHRNLVQL 392
             +G+G FGRV+       G   A+K +        + ++    E + +  + H  ++++
Sbjct: 10  RTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRM 69

Query: 393 HGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEEC 452
            G  +   ++ ++ DY+  G L  LL                       A+  L L    
Sbjct: 70  WGTFQDAQQIFMIMDYIEGGELFSLLRKSQ--------RFPNPVAKFYAAEVCLALEYLH 121

Query: 453 NQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGK 512
           ++ +++RD+KP NILLD   + K+ DFG AK         T  + GT  Y+APE+  T  
Sbjct: 122 SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD----VTYTLCGTPDYIAPEVVSTKP 177

Query: 513 ATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYYD 572
              S D +S+GIL+ E+  G                    E  L  E+        D  D
Sbjct: 178 YNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTY-------EKILNAELRFPPFFNEDVKD 230

Query: 573 LAEAELVLNLGLFCSAPNPVYRPDMRR---------------VVEFLLGDSSLPPLPPDI 617
           L                +   R    +               V E LL  +   P  P I
Sbjct: 231 LLSR---------LITRDLSQRLGNLQNGTEDVKNHPWFKEVVWEKLLSRNIETPYEPPI 281

Query: 618 --HLKDTRNIMGFSDFPNDSDFFNSKLMSSQSNSF 650
                DT     F  +P +   +  +     ++ F
Sbjct: 282 QQGQGDTSQ---FDKYPEEDINYGVQGEDPYADLF 313

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  148 bits (373), Expect = 2e-40
 Identities = 55/277 (19%), Positives = 99/277 (35%), Gaps = 26/277 (9%)

Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWC 396
            +GSG FG +Y G   + G EVAIK      +    +   E      ++    +    WC
Sbjct: 14  KIGSGSFGDIYLGTDIAAGEEVAIKLE--CVKTKHPQLHIESKIYKMMQGGVGIPTIRWC 71

Query: 397 RKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRV 456
             + +  ++   +   SL+ L     +   +  +      +   +   + Y+H    +  
Sbjct: 72  GAEGDYNVMVMELLGPSLEDL----FNFCSRKFSLKTVLLLADQMISRIEYIHS---KNF 124

Query: 457 VHRDVKPSNIL---LDTYLNAKLGDFGLAKIYEHGANPQ------TTHIVGTLGYLAPEL 507
           +HRDVKP N L           + DFGLAK Y      Q        ++ GT  Y +   
Sbjct: 125 IHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINT 184

Query: 508 TRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQT 567
               + +   D+ S G +++    G    +  KAA +        E   E +++  I+  
Sbjct: 185 HLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKY----ERISEKKMSTPIEVL 240

Query: 568 LDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL 604
              Y    A  +      C +     +PD   + +  
Sbjct: 241 CKGYPSEFATYLNF----CRSLRFDDKPDYSYLRQLF 273

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  145 bits (368), Expect = 4e-40
 Identities = 68/294 (23%), Positives = 108/294 (36%), Gaps = 43/294 (14%)

Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRI------GHNSQQGMKEFVAEIMSMGRLR--HRN 388
           L+GSGGFG VY G+  S  L VAIK +                   E++ + ++      
Sbjct: 11  LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70

Query: 389 LVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYL 448
           +++L  W  + D  +L+ +             +    R  L  +        + +++ + 
Sbjct: 71  VIRLLDWFERPDSFVLILERPEPVQDLFDFITE----RGALQEELARSFFWQVLEAVRHC 126

Query: 449 HEECNQRVVHRDVKPSNILLDT-YLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
           H      V+HRD+K  NIL+D      KL DFG   + +   +   T   GT  Y  PE 
Sbjct: 127 HN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEW 180

Query: 508 TRTGKA-TTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQ 566
            R  +    S  V+S GIL+ ++ CG     P +   E++         +  E    I  
Sbjct: 181 IRYHRYHGRSAAVWSLGILLYDMVCGDI---PFEHDEEIIRGQVFFRQRVSSECQHLIRW 237

Query: 567 TLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEF-LLGDSSLPPLPPDIHL 619
                              C A  P  RP    +     + D  LP    +IHL
Sbjct: 238 -------------------CLALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHL 272

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  146 bits (368), Expect = 6e-40
 Identities = 56/204 (27%), Positives = 89/204 (43%), Gaps = 15/204 (7%)

Query: 336 NLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKE-----FVAEIMSMGRLRHRNLV 390
           + +G G F  VY+    +    VAIK+I    +   K+      + EI  +  L H N++
Sbjct: 4   DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNII 63

Query: 391 QLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHE 450
            L      +  + LV+D++       +          +LT       ++   Q L YLH+
Sbjct: 64  GLLDAFGHKSNISLVFDFMETDLEVII-----KDNSLVLTPSHIKAYMLMTLQGLEYLHQ 118

Query: 451 ECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPE-LTR 509
                ++HRD+KP+N+LLD     KL DFGLAK +        TH V T  Y APE L  
Sbjct: 119 HW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAY-THQVVTRWYRAPELLFG 174

Query: 510 TGKATTSTDVYSYGILMLEVACGR 533
                   D+++ G ++ E+    
Sbjct: 175 ARMYGVGVDMWAVGCILAELLLRV 198

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score =  143 bits (361), Expect = 6e-39
 Identities = 44/280 (15%), Positives = 91/280 (32%), Gaps = 30/280 (10%)

Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRN-LVQLHGW 395
            +G G FG ++ G       +VAIK      +    +   E  +   L     +  ++ +
Sbjct: 12  RIGEGSFGVIFEGTNLLNNQQVAIKFE--PRRSDAPQLRDEYRTYKLLAGCTGIPNVYYF 69

Query: 396 CRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQR 455
            ++    +LV D +     D L         +  +          +   +  +HE   + 
Sbjct: 70  GQEGLHNVLVIDLLGPSLEDLL-----DLCGRKFSVKTVAMAAKQMLARVQSIHE---KS 121

Query: 456 VVHRDVKPSNILLDTYLN-----AKLGDFGLAKIY------EHGANPQTTHIVGTLGYLA 504
           +V+RD+KP N L+    +       + DFG+ K Y      +H    +  ++ GT  Y++
Sbjct: 122 LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMS 181

Query: 505 PELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAI 564
                  + +   D+ + G + +    G    +  KAA      + + E      + +  
Sbjct: 182 INTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELC 241

Query: 565 DQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL 604
                       E       +         PD   +    
Sbjct: 242 AGF--------PEEFYKYMHYARNLAFDATPDYDYLQGLF 273

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  143 bits (361), Expect = 6e-39
 Identities = 58/276 (21%), Positives = 110/276 (39%), Gaps = 32/276 (11%)

Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRI------GHNSQQGMKEFVAEIMSMGRLRHRNLV 390
            +GSG F  V +    S GL+ A K I              ++   E+  +  ++H N++
Sbjct: 17  ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 76

Query: 391 QLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHE 450
            LH     + +++L+ + V  G L   L +K+      LT ++  + L  I   L  ++ 
Sbjct: 77  TLHEVYENKTDVILILELVAGGELFDFLAEKES-----LTEEEATEFLKQI---LNGVYY 128

Query: 451 ECNQRVVHRDVKPSNILLD----TYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPE 506
             + ++ H D+KP NI+L          K+ DFGLA   + G   +  +I GT  ++APE
Sbjct: 129 LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG--NEFKNIFGTPEFVAPE 186

Query: 507 LTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQ 566
           +          D++S G++   +  G     P     +   +  V  ++ E E     + 
Sbjct: 187 IVNYEPLGLEADMWSIGVITYILLSGAS---PFLGDTKQETLANVSAVNYEFEDEYFSNT 243

Query: 567 TLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVE 602
           +    D                 +P  R  ++  ++
Sbjct: 244 SALAKDFIRR---------LLVKDPKKRMTIQDSLQ 270

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  142 bits (359), Expect = 1e-38
 Identities = 51/201 (25%), Positives = 86/201 (42%), Gaps = 9/201 (4%)

Query: 336 NLVGSGGFGRVYRGLMPSLGLEVAIKRI--GHNSQQGMKEFVAEIMSMGRLRHRNLVQLH 393
             +G G +G VY+      G  VA+K+I     ++      + EI  +  L H N+V+L 
Sbjct: 8   EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 67

Query: 394 GWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECN 453
                +++L LV++++       +    D      +        L    Q L  L    +
Sbjct: 68  DVIHTENKLYLVFEFLHQDLKKFM----DASALTGIPLPLIKSYLF---QLLQGLAFCHS 120

Query: 454 QRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKA 513
            RV+HRD+KP N+L++T    KL DFGLA+ +       T  +V         L      
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 180

Query: 514 TTSTDVYSYGILMLEVACGRR 534
           +T+ D++S G +  E+   R 
Sbjct: 181 STAVDIWSLGCIFAEMVTRRA 201

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  142 bits (360), Expect = 2e-38
 Identities = 53/202 (26%), Positives = 83/202 (41%), Gaps = 12/202 (5%)

Query: 336 NLVGSGGFGRVYRGLMPSLGLEVAIKRI---GHNSQQGMKEFVAEIMSMGRLRHRNLVQL 392
            L+G G FG+V      + G   A+K +      ++  +   V E   +   RH  L  L
Sbjct: 11  KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70

Query: 393 HGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEEC 452
               +  D L  V +Y   G L   L  +        T ++        A+ +  L    
Sbjct: 71  KYAFQTHDRLCFVMEYANGGELFFHLSRERV-----FTEERARFY---GAEIVSALEYLH 122

Query: 453 NQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGK 512
           ++ VV+RD+K  N++LD   + K+ DFGL K              GT  YLAPE+     
Sbjct: 123 SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD-GATMKTFCGTPEYLAPEVLEDND 181

Query: 513 ATTSTDVYSYGILMLEVACGRR 534
              + D +  G++M E+ CGR 
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGRL 203

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  142 bits (358), Expect = 6e-38
 Identities = 59/210 (28%), Positives = 93/210 (44%), Gaps = 17/210 (8%)

Query: 332 FGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQ 391
           + +  ++G+G FG VY+  +   G  VAIK++     Q  +    E+  M +L H N+V+
Sbjct: 22  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVR 77

Query: 392 LHGWCRKQDE------LLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSL 445
           L  +     E      L LV DYVP             + ++ L        +  + +SL
Sbjct: 78  LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS--RAKQTLPVIYVKLYMYQLFRSL 135

Query: 446 LYLHEECNQRVVHRDVKPSNILLDT-YLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLA 504
            Y+H      + HRD+KP N+LLD      KL DFG AK    G  P  ++I        
Sbjct: 136 AYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSYICSRYYRAP 191

Query: 505 PELTRTGKATTSTDVYSYGILMLEVACGRR 534
             +      T+S DV+S G ++ E+  G+ 
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELLLGQP 221

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  138 bits (347), Expect = 4e-37
 Identities = 57/283 (20%), Positives = 103/283 (36%), Gaps = 24/283 (8%)

Query: 336 NLVGSGGFGRVYRGLMPSLGLEVAIKRI--GHNSQQGMKEFVAEIMSMGRLRHRNLVQLH 393
             +G G +G V++         VA+KR+    + +      + EI  +  L+H+N+V+LH
Sbjct: 8   EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLH 67

Query: 394 GWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECN 453
                  +L LV+++                    L  +        + Q L  L    +
Sbjct: 68  DVLHSDKKLTLVFEFCDQDLKKY-----FDSCNGDLDPEIVKSF---LFQLLKGLGFCHS 119

Query: 454 QRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKA 513
           + V+HRD+KP N+L++     KL +FGLA+ +       +  +V         L      
Sbjct: 120 RNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLY 179

Query: 514 TTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLDYYDL 573
           +TS D++S G +  E+A   R + P     + L   +        E   ++ +  DY   
Sbjct: 180 STSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPY 239

Query: 574 AEAELVLNLGLF--------------CSAPNPVYRPDMRRVVE 602
                  +L                     NPV R      ++
Sbjct: 240 PMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  138 bits (347), Expect = 5e-37
 Identities = 68/285 (23%), Positives = 113/285 (39%), Gaps = 23/285 (8%)

Query: 336 NLVGSGGFGRVYRGL-MPSLGLEVAIKRI-----GHNSQQGMKEFVAEIMSMGRLRHRNL 389
             +G G +G+V++   + + G  VA+KR+                VA +  +    H N+
Sbjct: 13  AEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNV 72

Query: 390 VQLHGWCRKQDELLLVYDYVPNGSLD-KLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYL 448
           V+L   C            +    +D  L    D      +  +    ++  + + L +L
Sbjct: 73  VRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFL 132

Query: 449 HEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELT 508
           H     RVVHRD+KP NIL+ +    KL DFGLA+IY        T +V TL Y APE+ 
Sbjct: 133 HS---HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSF--QMALTSVVVTLWYRAPEVL 187

Query: 509 RTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLV----------DWVKELHLEG 558
                 T  D++S G +  E+   +          +L  +          DW +++ L  
Sbjct: 188 LQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPR 247

Query: 559 EITQAID-QTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVE 602
           +   +   Q ++ +     EL  +L L C   NP  R      + 
Sbjct: 248 QAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 292

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score =  136 bits (344), Expect = 1e-36
 Identities = 50/200 (25%), Positives = 89/200 (44%), Gaps = 11/200 (5%)

Query: 336 NLVGSGGFGRVYRGLMPSLGLEVAIKRI--GHNSQQGMKEFVAEIMSMGRLRHRNLVQLH 393
             +G G +G VY+      G   A+K+I      +      + EI  +  L+H N+V+L+
Sbjct: 8   EKIGEGTYGVVYKAQNNY-GETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLY 66

Query: 394 GWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECN 453
                +  L+LV++++       L   +       L        L+ +   + Y H+   
Sbjct: 67  DVIHTKKRLVLVFEHLDQDLKKLLDVCEGG-----LESVTAKSFLLQLLNGIAYCHD--- 118

Query: 454 QRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKA 513
           +RV+HRD+KP N+L++     K+ DFGLA+ +       T  IV         L  + K 
Sbjct: 119 RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKY 178

Query: 514 TTSTDVYSYGILMLEVACGR 533
           +T+ D++S G +  E+  G 
Sbjct: 179 STTIDIWSVGCIFAEMVNGT 198

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  134 bits (338), Expect = 1e-35
 Identities = 50/213 (23%), Positives = 89/213 (41%), Gaps = 22/213 (10%)

Query: 336 NLVGSGGFGRVYRGLMPSLGLEVAIKRI--GHNSQQGMKEFVAEIMSMGRLRHRNLVQLH 393
             +G G FG V++      G +VA+K++   +  +      + EI  +  L+H N+V L 
Sbjct: 16  AKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLI 75

Query: 394 GWCRKQDE--------LLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSL 445
             CR +          + LV+D+  +             +    T  +  +++  +   L
Sbjct: 76  EICRTKASPYNRCKGSIYLVFDFCEHDLAGL-----LSNVLVKFTLSEIKRVMQML---L 127

Query: 446 LYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTH---IVGTLGY 502
             L+     +++HRD+K +N+L+      KL DFGLA+ +    N Q       V TL Y
Sbjct: 128 NGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWY 187

Query: 503 LAPELTRTGKA-TTSTDVYSYGILMLEVACGRR 534
             PEL    +      D++  G +M E+     
Sbjct: 188 RPPELLLGERDYGPPIDLWGAGCIMAEMWTRSP 220

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  133 bits (334), Expect = 9e-35
 Identities = 48/200 (24%), Positives = 84/200 (42%), Gaps = 15/200 (7%)

Query: 338 VGSGGFGRVYRGLMPSLGLEVAIKRIGHN---SQQGMKEFVAEIMSMGRLRHRNLVQLHG 394
           +G+G FGRV        G   A+K +        + ++  + E   +  +    LV+L  
Sbjct: 49  LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108

Query: 395 WCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQ 454
             +    L +V +YV  G +   L           +          I  +  YLH     
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGR-----FSEPHARFYAAQIVLTFEYLHS---L 160

Query: 455 RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKAT 514
            +++RD+KP N+L+D     ++ DFG AK  +     +T  + GT   LAPE+  +    
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWTLCGTPEALAPEIILSKGYN 216

Query: 515 TSTDVYSYGILMLEVACGRR 534
            + D ++ G+L+ E+A G  
Sbjct: 217 KAVDWWALGVLIYEMAAGYP 236

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  129 bits (326), Expect = 1e-33
 Identities = 48/199 (24%), Positives = 87/199 (43%), Gaps = 9/199 (4%)

Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRI--GHNSQQGMKEFVAEIMSMGRLRHRNLVQLHG 394
            VGSG +G V   +    G +VAIK++     S+   K    E+  +  +RH N++ L  
Sbjct: 25  PVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLD 84

Query: 395 WCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQ 454
                + L    D+            K  K  + L  D+   ++  + + L Y+H     
Sbjct: 85  VFTPDETLDDFTDFYLVMPFMGTDLGKLMK-HEKLGEDRIQFLVYQMLKGLRYIHA---A 140

Query: 455 RVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKAT 514
            ++HRD+KP N+ ++     K+ DFGLA+      +  T ++V         +    + T
Sbjct: 141 GIIHRDLKPGNLAVNEDCELKILDFGLAR---QADSEMTGYVVTRWYRAPEVILNWMRYT 197

Query: 515 TSTDVYSYGILMLEVACGR 533
            + D++S G +M E+  G+
Sbjct: 198 QTVDIWSVGCIMAEMITGK 216

>d1nlsa_ b.29.1.1 (A:) Concanavalin A {Jack bean (Canavalia ensiformis) [TaxId: 3823]} Length = 237

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Concanavalin A
species: Jack bean (Canavalia ensiformis) [TaxId: 3823]

 Score =  126 bits (318), Expect = 1e-33
 Identities = 33/127 (25%), Positives = 60/127 (47%), Gaps = 15/127 (11%)

Query: 120 STRMLAVEFDIIQNTELIDINDNHVGIDISSLISSASEPASYYSGNNHRIPILLRSGDPI 179
           +  ++AVE D   NT++ D +  H+GIDI S+ S  +   +  +G               
Sbjct: 1   ADTIVAVELDTYPNTDIGDPSYPHIGIDIKSVRSKKTAKWNMQNGKVG------------ 48

Query: 180 QAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLITASHN 239
            A + Y+S +  ++     +  P      +S  +DL +V+ E++  G SASTGL   ++ 
Sbjct: 49  TAHIIYNSVDKRLSAV---VSYPNADSATVSYDVDLDNVLPEWVRVGLSASTGLYKETNT 105

Query: 240 VHGWSIS 246
           +  WS +
Sbjct: 106 ILSWSFT 112

>d1nlsa_ b.29.1.1 (A:) Concanavalin A {Jack bean (Canavalia ensiformis) [TaxId: 3823]} Length = 237

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Concanavalin A
species: Jack bean (Canavalia ensiformis) [TaxId: 3823]

 Score = 86.9 bits (215), Expect = 8e-20
 Identities = 29/115 (25%), Positives = 41/115 (35%), Gaps = 9/115 (7%)

Query: 3   VVHADTTSFLYNGFLHANLSLEGAAYISTSGILTVTNKSEGL------IGHALYPNPLRF 56
             +A    F        +L L+G A   T G L +T  S         +G AL+  P+  
Sbjct: 122 ETNALHFMFNQFSKDQKDLILQGDATTGTDGNLELTRVSSNGSPQGSSVGRALFYAPVHI 181

Query: 57  KTSNKSVAIDFRTNFVFSILPKYPDLGGQGLAFIIISTNRPENC-LANQFLGLPN 110
             S+  VA  F   F F I          G+AF I + +         + LGL  
Sbjct: 182 WESSAVVA-SFEATFTFLIKSPDSH-PADGIAFFISNIDSSIPSGSTGRLLGLFP 234

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score =  125 bits (315), Expect = 2e-32
 Identities = 47/216 (21%), Positives = 88/216 (40%), Gaps = 21/216 (9%)

Query: 336 NLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLR-HRNLVQLHG 394
             +G G +  V+  +  +   +V +K +        K+   EI  +  LR   N++ L  
Sbjct: 41  RKLGRGKYSEVFEAINITNNEKVVVKIL---KPVKKKKIKREIKILENLRGGPNIITLAD 97

Query: 395 WCRKQDE--LLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEEC 452
             +        LV+++V N    +L         + LT       +  I ++L Y H   
Sbjct: 98  IVKDPVSRTPALVFEHVNNTDFKQLY--------QTLTDYDIRFYMYEILKALDYCHS-- 147

Query: 453 NQRVVHRDVKPSNILLDT-YLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTG 511
              ++HRDVKP N+++D  +   +L D+GLA+ Y  G   +    V +  +  PEL    
Sbjct: 148 -MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG--QEYNVRVASRYFKGPELLVDY 204

Query: 512 KA-TTSTDVYSYGILMLEVACGRRSIEPQKAAAELL 546
           +    S D++S G ++  +   +          + L
Sbjct: 205 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 240

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  122 bits (307), Expect = 3e-31
 Identities = 59/256 (23%), Positives = 107/256 (41%), Gaps = 21/256 (8%)

Query: 336 NLVGSGGFGRVYRG---LMPSLGLEVAIKRI----GHNSQQGMKEFVAEIMSMGRLRHR- 387
            ++G+G +G+V+          G   A+K +         +  +    E   +  +R   
Sbjct: 30  KVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSP 89

Query: 388 NLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLY 447
            LV LH   + + +L L+ DY+  G L   L  ++       T  +     I + + +L 
Sbjct: 90  FLVTLHYAFQTETKLHLILDYINGGELFTHLSQRER-----FTEHEVQ---IYVGEIVLA 141

Query: 448 LHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPEL 507
           L       +++RD+K  NILLD+  +  L DFGL+K +      +     GT+ Y+AP++
Sbjct: 142 LEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDI 201

Query: 508 TRTGKA--TTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAID 565
            R G +    + D +S G+LM E+  G     P     E      +    L+ E     +
Sbjct: 202 VRGGDSGHDKAVDWWSLGVLMYELLTGAS---PFTVDGEKNSQAEISRRILKSEPPYPQE 258

Query: 566 QTLDYYDLAEAELVLN 581
            +    DL +  L+ +
Sbjct: 259 MSALAKDLIQRLLMKD 274

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  122 bits (306), Expect = 4e-31
 Identities = 53/215 (24%), Positives = 92/215 (42%), Gaps = 21/215 (9%)

Query: 327 SVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRI--GHNSQQGMKEFVAEIMSMGRL 384
           +V K +     +GSG  G V       L   VAIK++     +Q   K    E++ M  +
Sbjct: 14  TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV 73

Query: 385 RHRNLVQLHGWCRKQD------ELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKIL 438
            H+N++ L      Q       ++ LV + +       +  + D         ++   +L
Sbjct: 74  NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELD--------HERMSYLL 125

Query: 439 IGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVG 498
             +   + +LH       +HRD+KPSNI++ +    K+ DFGLA+    G +   T  V 
Sbjct: 126 YQMLCGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVV 180

Query: 499 TLGYLAPELTRTGKATTSTDVYSYGILMLEVACGR 533
           T  Y APE+        + D++S G +M E+   +
Sbjct: 181 TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 215

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  117 bits (294), Expect = 2e-29
 Identities = 50/200 (25%), Positives = 82/200 (41%), Gaps = 9/200 (4%)

Query: 336 NLVGSGGFGRVYRGLMPSLGLEVAIKRI--GHNSQQGMKEFVAEIMSMGRLRHRNLVQLH 393
           + VGSG +G V        GL VA+K++     S    K    E+  +  ++H N++ L 
Sbjct: 24  SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 83

Query: 394 GWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECN 453
                   L    D      L     +   K +K LT D    ++  I + L Y+H    
Sbjct: 84  DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSADI 142

Query: 454 QRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKA 513
               HRD+KPSN+ ++     K+ DFGLA+  +      T ++          +      
Sbjct: 143 I---HRDLKPSNLAVNEDCELKILDFGLARHTDD---EMTGYVATRWYRAPEIMLNWMHY 196

Query: 514 TTSTDVYSYGILMLEVACGR 533
             + D++S G +M E+  GR
Sbjct: 197 NQTVDIWSVGCIMAELLTGR 216

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  109 bits (272), Expect = 2e-26
 Identities = 41/232 (17%), Positives = 78/232 (33%), Gaps = 16/232 (6%)

Query: 337 LVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWC 396
            +G G F  V+          VA+K +    +   +    EI  + R+   +  +     
Sbjct: 20  KLGWGHFSTVWLAKDMVNNTHVAMKIV-RGDKVYTEAAEDEIKLLQRVNDADNTKEDSMG 78

Query: 397 RKQDELLLVY--DYVPNGSLDKL---------LFDKDHKLRKLLTWDQRYKILIGIAQSL 445
                 LL +     PNG    +         L        + +      +I   +   L
Sbjct: 79  ANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGL 138

Query: 446 LYLHEECNQRVVHRDVKPSNILLDTY-LNAKLGDFGLAKIYEHGANPQTTHIV-GTLGYL 503
            Y+H  C   ++H D+KP N+L++       L    +A +       +       T  Y 
Sbjct: 139 DYMHRRCG--IIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTREYR 196

Query: 504 APELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELH 555
           +PE+          D++S   L+ E+  G    EP +  +     D + ++ 
Sbjct: 197 SPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQII 248

>d1gv9a_ b.29.1.13 (A:) Carbohydrate-recognition domain of P58/ERGIC-53 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 228

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Lectin leg-like
domain: Carbohydrate-recognition domain of P58/ERGIC-53
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 92.1 bits (228), Expect = 1e-21
 Identities = 30/227 (13%), Positives = 66/227 (29%), Gaps = 29/227 (12%)

Query: 20  NLSLEGAAYISTSGILTVTNKSEGLIGHALYPNPLRFKTSNKSVAIDFRTNFVFSILPKY 79
             +  G A  S +  + +    +   G         F+        ++     F +  + 
Sbjct: 25  FWAHAGNAIPS-ADQIRIAPSLKSQRGSVWTKTKAAFE--------NWEVEVTFRVTGRG 75

Query: 80  PDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTKFSTRMLAVEFDIIQNTELIDI 139
             +G  GLA            L     G  ++            + + FD   N      
Sbjct: 76  -RIGADGLAIWYT----ENQGLDGPVFGSADMWNG---------VGIFFDSFDNDG--KK 119

Query: 140 NDNHVGIDISSLISSASEPASYYSGNNHRIPILLR-SGDPIQAWVDYSSQEMLINVSICP 198
           N+  + +  ++   +        +          R    P++A + Y  + + + ++   
Sbjct: 120 NNPAIVVVGNNGQINYDHQNDGATQALASCQRDFRNKPYPVRAKITYYQKTLTVMINNGF 179

Query: 199 LGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLITASHNVHGWSI 245
                 Y          + VI    + G SA+TG +   H+V  +  
Sbjct: 180 TPDKNDYEFCA---KVENMVIPTQGHFGISAATGGLADDHDVLSFLT 223

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 86.0 bits (212), Expect = 6e-20
 Identities = 28/162 (17%), Positives = 53/162 (32%), Gaps = 23/162 (14%)

Query: 336 NLVGSGGFGRVYRGLMPSLGLEVAIK----------RIGHNSQQGMKEFVAEIMSMGRLR 385
            L+G G    V+         E  +K          ++      G   F    +   R  
Sbjct: 6   KLMGEGKESAVFNCYSEK-FGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNE 64

Query: 386 HRNLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSL 445
            R L +L G    +      Y +  N  L +L+  K+    ++   D+   +L  I + +
Sbjct: 65  FRALQKLQGLAVPKV-----YAWEGNAVLMELIDAKELYRVRVENPDE---VLDMILEEV 116

Query: 446 LYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEH 487
              +      +VH D+   N+L+       + DF  +     
Sbjct: 117 AKFYHRG---IVHGDLSQYNVLVSEE-GIWIIDFPQSVEVGE 154

>d2a6va1 b.29.1.13 (A:9-226) Emp46p N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 218

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Lectin leg-like
domain: Emp46p N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 43.8 bits (103), Expect = 2e-05
 Identities = 32/239 (13%), Positives = 56/239 (23%), Gaps = 42/239 (17%)

Query: 10  SFLYNGFLHANLSLEGAAYISTSGILTVTNKSEGLIGHALYPNPLRFKTSNKSVAIDFRT 69
                    +  +L     +     +    K+    G          K            
Sbjct: 13  EVTDQQKELSQWTLGDKVKLEEGRFVLTPGKNT--KGSLWLKPEYSIKD-------AMTI 63

Query: 70  NFVFSILPKYPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTKFSTRMLAVEFD 129
            + F            GLAF +   N  ++           +   SS KF+   L +   
Sbjct: 64  EWTFRSFGFRGS-TKGGLAFWLKQGNEGDS---------TELFGGSSKKFNG--LMILLR 111

Query: 130 IIQNTEL---IDINDNHVGIDISSLISSASEPASYYSGNNHRIPILLRSGDPIQAWVDYS 186
           +           +ND    +DI S    AS    Y             S  P    + Y+
Sbjct: 112 LDDKLGESVTAYLNDGTKDLDIESSPYFASCLFQY-----------QDSMVPSTLRLTYN 160

Query: 187 SQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLITASHNVHGWSI 245
             +  +      L +    R        +  +       G SA       S  +    +
Sbjct: 161 PLDNHL------LKLQMDNRVCFQTR-KVKFMGSSPFRIGTSAINDASKESFEILKMKL 212

>d2a6za1 b.29.1.13 (A:7-227) Emp47p N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 221

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Lectin leg-like
domain: Emp47p N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 40.4 bits (94), Expect = 3e-04
 Identities = 24/228 (10%), Positives = 51/228 (22%), Gaps = 41/228 (17%)

Query: 17  LHANLSLEGAAYISTSGILTVTNKSEGLIGHALYPNPLRFKTSNKSVAIDFRTNFVFSIL 76
           +  N      A +    I+  +N++    G          K         F   + F  +
Sbjct: 21  VPNNWQTGEQASLEEGRIVLTSNQNS--KGSLWLKQGFDLKD-------SFTMEWTFRSV 71

Query: 77  PKYPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTKFSTRMLAVEFDIIQNTEL 136
                    G++F  +  +                  +    +    L +  D       
Sbjct: 72  GYS-GQTDGGISFWFVQDSNI---------PRDKQLYNGPVNYDG--LQLLVDNNGPLGP 119

Query: 137 ---IDINDNHVGIDISSLISSASEPASYYSGNNHRIPILLRSGDPIQAWVDYSSQEMLIN 193
                +ND    +D + +   +                   S  P    V Y  ++  + 
Sbjct: 120 TLRGQLNDGQKPVDKTKIYDQSFASCLM---------GYQDSSVPSTIRVTYDLEDDNL- 169

Query: 194 VSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLITASHNVH 241
                L V    +                   G +A  G +  +    
Sbjct: 170 -----LKVQVDNKVCFQ--TRKVRFPSGSYRIGVTAQNGAVNNNAESF 210

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	653
d1hqla_	236	Legume lectin {Griffonia simplicifolia, lectin I-b	100.0
d1leda_	243	Legume lectin {West-central african legume (Griffo	100.0
d1fx5a_	240	Legume lectin {Furze (Ulex europaeus), UEA-I [TaxI	100.0
d1qnwa_	237	Legume lectin {Furze (Ulex europaeus), UEA-II [Tax	100.0
d1gzca_	239	Legume lectin {Cockspur coral tree (Erythrina cris	100.0
d2d3sa1	237	Legume lectin {Winged bean (Psophocarpus tetragono	100.0
d1g9fa_	251	Legume lectin {Soybean (Glycine max) [TaxId: 3847]	100.0
d1f9ka_	234	Legume lectin {Winged bean (Psophocarpus tetragono	100.0
d1g8wa_	233	Phytohemagglutinin-L, PHA-L, also arcelin {Kidney	100.0
d1g7ya_	253	Legume lectin {Horse gram (Dolichos biflorus), dif	100.0
d1dbna_	239	Legume lectin {Maackia amurensis, leukoagglutinin	100.0
d1v6ia_	232	Legume lectin {Peanut (Arachis hypogaea) [TaxId: 3	100.0
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	100.0
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	100.0
g1qmo.1	230	Legume lectin {Field bean (Dolichos lablab), Fril	100.0
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	100.0
d1fnya_	237	Legume lectin {Black locust (Robinia pseudoacacia)	100.0
d1n47a_	233	Legume lectin {Hairy vetch (Vicia villosa), isolec	100.0
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	100.0
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	100.0
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	100.0
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	100.0
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	100.0
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	100.0
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	100.0
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	100.0
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	100.0
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	100.0
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	100.0
d1ukga_	241	Legume lectin {Bloodwood tree (Pterocarpus angolen	100.0
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	100.0
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	100.0
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	100.0
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	100.0
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	100.0
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	100.0
g2ltn.1	229	Legume lectin {Garden pea (Pisum sativum) [TaxId:	100.0
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	100.0
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	100.0
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	100.0
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	100.0
d1avba_	226	Phytohemagglutinin-L, PHA-L, also arcelin {Kidney	100.0
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	100.0
d1ioaa_	228	Phytohemagglutinin-L, PHA-L, also arcelin {Kidney	100.0
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	100.0
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	100.0
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	100.0
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	100.0
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	100.0
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	100.0
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	100.0
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	100.0
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	100.0
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	100.0
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	100.0
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	100.0
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	100.0
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	100.0
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	100.0
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	100.0
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	100.0
d1dhkb_	204	Phytohemagglutinin-L, PHA-L, also arcelin {Kidney	100.0
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	100.0
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	100.0
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	100.0
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	100.0
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	100.0
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	100.0
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	100.0
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	100.0
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	100.0
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	100.0
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	100.0
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	100.0
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	100.0
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	100.0
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	100.0
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	100.0
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	100.0
d1nlsa_	237	Concanavalin A {Jack bean (Canavalia ensiformis) [	99.96
d1gv9a_	228	Carbohydrate-recognition domain of P58/ERGIC-53 {R	99.95
d1nlsa_	237	Concanavalin A {Jack bean (Canavalia ensiformis) [	99.9
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.86
d2a6za1	221	Emp47p N-terminal domain {Baker's yeast (Saccharom	99.84
d2a6va1	218	Emp46p N-terminal domain {Baker's yeast (Saccharom	99.83
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	98.48
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	97.7
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	97.53
d1nw1a_	395	Choline kinase {Caenorhabditis elegans [TaxId: 623	96.45
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	96.18
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	95.79

>d1hqla_ b.29.1.1 (A:) Legume lectin {Griffonia simplicifolia, lectin I-b4 [TaxId: 3850]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Griffonia simplicifolia, lectin I-b4 [TaxId: 3850]

Probab=100.00  E-value=5.7e-56  Score=435.77  Aligned_cols=225  Identities=24%  Similarity=0.372  Sum_probs=197.9

Q ss_pred             ceeEEeCCCCC---CCeEEecceEecCCCcEEecCCC------CCceEEEEcCCCeecccCCCCceeeeEEEEEEEEecC
Q 048419            8 TTSFLYNGFLH---ANLSLEGAAYISTSGILTVTNKS------EGLIGHALYPNPLRFKTSNKSVAIDFRTNFVFSILPK   78 (653)
Q Consensus         8 ~~~f~~~~f~~---~~l~~~g~a~~~~~g~l~Lt~~~------~~~~Gr~~y~~pi~~~~~~~~~~~sF~t~F~f~i~~~   78 (653)
                      +++|+|++|..   .+|+|+|||++. +|.|+||+..      ..++|||+|++||+||+..++++|||+|+|+|.|.+.
T Consensus         1 ~~sF~f~~F~~~~~~~l~l~G~A~~~-~~~l~LT~~~~~~~~~~~s~Gra~y~~Pv~l~~~~t~~~asFsT~F~F~i~~~   79 (236)
T d1hqla_           1 SVSFTFPNFWSDVEDSIIFQGDANTT-AGTLQLCKTNQYGTPLQWSAGRALYSDPVQLWDNKTESVASFYTEFTFFLKIT   79 (236)
T ss_dssp             CCEEEESCSCSCGGGTEEEEETCEEE-TTEEECSCBCTTSCBCSSCEEEEEESSCEECCCSTTCCCCEEEEEEEEEEEEC
T ss_pred             CEEEEeCCCCCCCcCCEEEeccEEec-CCEEEEecCCCCCcccccceEEEEECCCEEeecCCCCceeEEEEEEEEEEeCC
Confidence            57999999964   679999999985 8999999754      4589999999999999999999999999999999874


Q ss_pred             CCCCCCCceEEEEecCCCCCCCCCCccccCCCcccCCCCCCCCceEEEEeecccccccCCCCCCeeeEecCCCCcCCccc
Q 048419           79 YPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTKFSTRMLAVEFDIIQNTELIDINDNHVGIDISSLISSASEP  158 (653)
Q Consensus        79 ~~~~~gdGlaF~l~~~~~~~~~~~g~~lG~~~~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~~~Hvgid~ns~~s~~~~~  158 (653)
                       ...+||||||||+|....+ +..|++||+++..+. .+...+++|||||||++|.+++||++||||||+||+.|.++.+
T Consensus        80 -~~~~gDGlAFvl~p~~~~~-~~~G~~lGl~~~~~~-~~~~~~~~vAVEFDT~~n~~~~D~~~nHIgIdvns~~s~~~~~  156 (236)
T d1hqla_          80 -GNGPADGLAFFLAPPDSDV-KDAGEYLGLFNKSTA-TQPSKNQVVAVEFDTWTNPNFPEPSYRHIGINVNSIVSVATKR  156 (236)
T ss_dssp             -SSCCCCEEEEEEECTTCCC-CCCGGGTTTSCTTTT-TCGGGCCCEEEEEECSCCSSSCCCSSCEEEEEESSSSCSEEEE
T ss_pred             -CCCCCceEEEEEeCCCCCC-CCCcccccccccccc-CCcccCceEEEEeeCccCCCCCCCCCCEEEEEcCCcccccccc
Confidence             4568999999999976544 468899999987654 1345689999999999999999999999999999999988776


Q ss_pred             CccccCCCCccccccCCCCceEEEEEecCCceEEEEEEeeCCCCCCCCCceeeeecCCcccccceEEeEecccCcc-cce
Q 048419          159 ASYYSGNNHRIPILLRSGDPIQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLI-TAS  237 (653)
Q Consensus       159 ~~~~~~~~~~~~~~l~~g~~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~~l~~~~dL~~~l~~~~~vGFsastg~~-~~~  237 (653)
                      +.         ..++.+|+.++|||+||+.+++|+|+|++.   ++..|+|++.|||+++|+++||||||||||.. .+.
T Consensus       157 ~~---------~~~l~~G~~~~v~I~Yd~~~~~L~V~l~~~---~~~~~~ls~~vdL~~~l~~~v~vGFSasTG~~~~~~  224 (236)
T d1hqla_         157 WE---------DSDIFSGKIATARISYDGSAEILTVVLSYP---DGSDYILSHSVDMRQNLPESVRVGISASTGNNQFLT  224 (236)
T ss_dssp             CC---------HHHHTSCSCEEEEEEEETTTTEEEEEEEET---TTEEEEEEEECCGGGTSCSEEEEEEEEECCSCCCEE
T ss_pred             cc---------cccccCCCEEEEEEEEeCCCcEEEEEEecC---CCCCeeEEEEeCHHHhCCCcEEEEEEeECCCCCceE
Confidence            53         457899999999999999999999999874   36678999999999999999999999999975 578


Q ss_pred             eeecceeeeec
Q 048419          238 HNVHGWSISIG  248 (653)
Q Consensus       238 ~~i~sWsf~~~  248 (653)
                      |+|++|+|++.
T Consensus       225 h~I~sWsF~s~  235 (236)
T d1hqla_         225 VYILSWRFSSN  235 (236)
T ss_dssp             EEEEEEEEEEE
T ss_pred             EEEEEeEeEec
Confidence            99999999863

>d1leda_ b.29.1.1 (A:) Legume lectin {West-central african legume (Griffonia simplicifolia) [TaxId: 3850]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: West-central african legume (Griffonia simplicifolia) [TaxId: 3850]

Probab=100.00  E-value=6.8e-55  Score=429.50  Aligned_cols=225  Identities=24%  Similarity=0.336  Sum_probs=197.0

Q ss_pred             cCceeEEeCCCC------CCCeEEecceEecCCCcEEecCCC------CCceEEEEcCCCeecccCCCCceeeeEEEEEE
Q 048419            6 ADTTSFLYNGFL------HANLSLEGAAYISTSGILTVTNKS------EGLIGHALYPNPLRFKTSNKSVAIDFRTNFVF   73 (653)
Q Consensus         6 ~~~~~f~~~~f~------~~~l~~~g~a~~~~~g~l~Lt~~~------~~~~Gr~~y~~pi~~~~~~~~~~~sF~t~F~f   73 (653)
                      .++++|+|++|.      ..||+|+|||++. +|.|+||+..      ..++|||+|++||+||++ +++++||+|+|+|
T Consensus         1 ~~s~sF~f~~F~~~~~~~~~~l~l~G~A~~~-~g~l~LT~~~~~~~~~~~s~Gra~y~~Pv~l~~~-t~~~asFsT~F~f   78 (243)
T d1leda_           1 ENTVNFTYPDFWSYSLKNGTEITFLGDATRI-PGALQLTKTDANGNPVRSSAGQASYSEPVFLWDS-TGKAASFYTSFTF   78 (243)
T ss_dssp             CCCCEEEESCBCCTTSCTTTSEEEEETCEEE-TBEEECSCBCTTSCBCSSEEEEEEESSCEECBCT-TSCBCEEEEEEEE
T ss_pred             CCceEEEcCCCCCCCCCCCCcEEEeeeeEEc-CCEEEeccCCCCCCccccceEEEEeCCCeEecCC-CCcEeeEEEEEEE
Confidence            368999999995      3689999999996 8999999654      358999999999999995 7899999999999


Q ss_pred             EEecCCCCCCCCceEEEEecCCCCCCCCCCccccCCCcccCCCCCCCCceEEEEeecccccccCCCCCCeeeEecCCCCc
Q 048419           74 SILPKYPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTKFSTRMLAVEFDIIQNTELIDINDNHVGIDISSLIS  153 (653)
Q Consensus        74 ~i~~~~~~~~gdGlaF~l~~~~~~~~~~~g~~lG~~~~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~~~Hvgid~ns~~s  153 (653)
                      .|.+. ...+||||||||+|.... .+.+|++||+++..+.. +...+++|||||||++|.+++||++||||||+|++.|
T Consensus        79 ~i~~~-~~~~gdGlAF~l~p~~~~-~~~~g~~lGl~~~~~~~-~~~~~~~vAVEFDT~~n~~~~d~~~nHVgIdvns~~s  155 (243)
T d1leda_          79 LLKNY-GAPTADGLAFFLAPVDSS-VKDYGGFLGLFRHETAA-DPSKNQVVAVEFDTWINKDWNDPPYPHIGIDVNSIVS  155 (243)
T ss_dssp             EEEES-SSSCBCEEEEEEEETTCC-CCCCGGGTTTCCTTTTT-CGGGCCCEEEEEECSCCGGGTCCSSCEEEEEESSSSC
T ss_pred             EcCCC-CCCCCCceEEEEcCCCCC-CCCCccccccccccccC-CCccCcEEEEEEeCccccccCCCCCCceEEEecCccc
Confidence            88765 456899999999997654 45678999999876541 3456899999999999999999999999999999999


Q ss_pred             CCcccCccccCCCCccccccCCCCceEEEEEecCCceEEEEEEeeCCCCCCCCCceeeeecCCcccccceEEeEecccCc
Q 048419          154 SASEPASYYSGNNHRIPILLRSGDPIQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGL  233 (653)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~l~~g~~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~~l~~~~dL~~~l~~~~~vGFsastg~  233 (653)
                      ..+.++.         ..++.+|+.++|||+||+.+++|+|+|+..   ++..|+|++.|||+++|+++||||||||||.
T Consensus       156 ~~~~~~~---------~~~~~~g~~~~v~I~Yd~~~~~L~V~l~~~---~~~~p~ls~~idL~~~l~~~vyvGFSAsTG~  223 (243)
T d1leda_         156 VATTRWE---------NDDAYGSSIATAHITYDARSKILTVLLSYE---HGRDYILSHVVDLAKVLPQKVRIGFSAGVGY  223 (243)
T ss_dssp             SEEEECC---------HHHHTSCCEEEEEEEEETTTTEEEEEEEET---TSCEEEEEEECCHHHHSCSEEEEEEEEEECB
T ss_pred             ccccccc---------cCCcccCceeEEEEEEECCCCEEEEEEeeC---CCCCceEEEecCHHHhcCCcEEEEEEcccCC
Confidence            8887754         347889999999999999999999999864   4667899999999999999999999999995


Q ss_pred             ccceeeecceeeeec
Q 048419          234 ITASHNVHGWSISIG  248 (653)
Q Consensus       234 ~~~~~~i~sWsf~~~  248 (653)
                       .|.|+|++|+|++.
T Consensus       224 -~~~h~I~sWsF~s~  237 (243)
T d1leda_         224 -DEVTYILSWHFFST  237 (243)
T ss_dssp             -SEEEEEEEEEEEEE
T ss_pred             -cceeeEEEEEEEee
Confidence             69999999999864

>d1fx5a_ b.29.1.1 (A:) Legume lectin {Furze (Ulex europaeus), UEA-I [TaxId: 3902]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Furze (Ulex europaeus), UEA-I [TaxId: 3902]

Probab=100.00  E-value=4.1e-54  Score=425.25  Aligned_cols=227  Identities=25%  Similarity=0.359  Sum_probs=198.9

Q ss_pred             cCceeEEeCCCCC--CCeEEecceEecCCCcEEecCCC----CCceEEEEcCCCeecccCCCCceeeeEEEEEEEEecC-
Q 048419            6 ADTTSFLYNGFLH--ANLSLEGAAYISTSGILTVTNKS----EGLIGHALYPNPLRFKTSNKSVAIDFRTNFVFSILPK-   78 (653)
Q Consensus         6 ~~~~~f~~~~f~~--~~l~~~g~a~~~~~g~l~Lt~~~----~~~~Gr~~y~~pi~~~~~~~~~~~sF~t~F~f~i~~~-   78 (653)
                      ++++||+|++|++  +||+|+|||++.++|.|+||+..    ..++|||+|++||+||++++++++||+|+|+|.|... 
T Consensus         1 ~~~~sF~f~~F~~~~~~l~l~G~A~~~~~g~l~LT~~~~~~~~~~~G~a~y~~Pv~l~~~~t~~~~sF~t~F~f~i~~~~   80 (240)
T d1fx5a_           1 SDDLSFKFKNFSQNGKDLSFQGNASVIETGVLQLNKVGNNLPDETGGIARYIAPIHIWNCNTGELASFITSFSFFMETSA   80 (240)
T ss_dssp             CCEEEEEESSCCTTCSSEEEEETCEECTTSCEESCCCSSSSCSEEEEEEEESSCEECEETTTTEECEEEEEEEEEEEESS
T ss_pred             CCceEEECCCCCCCCCCEEEeeeeEecCCCEEEccCCCCCCccceeEEEecCCCceeecCCCCceeeeEEEEEEEEeCCC
Confidence            4678999999964  68999999999889999999775    3478999999999999999999999999999999654 


Q ss_pred             CCCCCCCceEEEEecCCCCCCCCCCccccCCCcccCCCCCCCCceEEEEeeccccc-ccCCCCCCeeeEecCCCCcCCcc
Q 048419           79 YPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTKFSTRMLAVEFDIIQNT-ELIDINDNHVGIDISSLISSASE  157 (653)
Q Consensus        79 ~~~~~gdGlaF~l~~~~~~~~~~~g~~lG~~~~~~~~~~~~~~~~vaVEFDt~~n~-~~~d~~~~Hvgid~ns~~s~~~~  157 (653)
                      ++..+||||||+|+|... +.+.+|++||+++..+.   +..+++|||||||++|. +++||++||||||+||+.+..+.
T Consensus        81 ~~~~ggdG~AFvl~p~~~-~~~~~g~~lGl~~~~~~---~~~~~~vAVEFDT~~n~~~~~D~~~nHIgid~ns~~s~~~~  156 (240)
T d1fx5a_          81 NPKAATDGLTFFLAPPDS-PLRRAGGYFGLFNDTKC---DSSYQTVAVEFDTIGSPVNFWDPGFPHIGIDVNCVKSINAE  156 (240)
T ss_dssp             CGGGCCCEEEEEEECTTC-CCCBCGGGTTTBSSSCC---CGGGCCEEEEEECCCTTTSTTSCSSCEEEEEESSSSCSEEE
T ss_pred             CCCCCCCcEEEEECCCCC-CCCCCCccccccccCCC---CccCceEEEEeeccccccccCCCCCCceEEccCCccccccc
Confidence            445689999999999764 56788999999986543   45678999999999984 67899999999999999988777


Q ss_pred             cCccccCCCCccccccCCCCceEEEEEecCCceEEEEEEeeCCCCCCCCCceeeeecCCcccccceEEeEecccCc-ccc
Q 048419          158 PASYYSGNNHRIPILLRSGDPIQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGL-ITA  236 (653)
Q Consensus       158 ~~~~~~~~~~~~~~~l~~g~~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~~l~~~~dL~~~l~~~~~vGFsastg~-~~~  236 (653)
                      .+.          ..+.+|+.++|||+||+.+++|+|+|.+.+  +|..|+++..|||+.+|+++||||||||||. ..|
T Consensus       157 ~~~----------~~~~~g~~~~v~I~Yd~~~~~L~V~l~~~~--~~~~~~ls~~vdLs~~l~~~v~vGFSasTG~~~~~  224 (240)
T d1fx5a_         157 RWN----------KRYGLNNVANVEIIYEASSKTLTASLTYPS--DQTSISVTSIVDLKEILPEWVSVGFSGSTYIGRQA  224 (240)
T ss_dssp             ECC----------CCCSGGGCEEEEEEEETTTTEEEEEEEETT--TTEEEEEEEECCGGGTSCSEEEEEEEEEEETTSCE
T ss_pred             ccc----------cccCCCCeEEEEEEEcCCCCEEEEEEecCC--CceeeEEeEEEchHHhCCCcEEEEEEeECCCCCCc
Confidence            653          356789999999999999999999998755  5778899999999999999999999999995 568


Q ss_pred             eeeecceeeeec
Q 048419          237 SHNVHGWSISIG  248 (653)
Q Consensus       237 ~~~i~sWsf~~~  248 (653)
                      .|+|++|+|++.
T Consensus       225 ~H~I~sWsFsst  236 (240)
T d1fx5a_         225 THEVLNWYFTST  236 (240)
T ss_dssp             EEEEEEEEEEEE
T ss_pred             eEEEEEEEeEEe
Confidence            999999999864

>d1qnwa_ b.29.1.1 (A:) Legume lectin {Furze (Ulex europaeus), UEA-II [TaxId: 3902]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Furze (Ulex europaeus), UEA-II [TaxId: 3902]

Probab=100.00  E-value=2.4e-53  Score=419.31  Aligned_cols=225  Identities=28%  Similarity=0.450  Sum_probs=197.6

Q ss_pred             cCceeEEeCCCC--CCCeEEecceEecCCCcEEecCCC---CCceEEEEcCCCeecccCCCCceeeeEEEEEEEEecCCC
Q 048419            6 ADTTSFLYNGFL--HANLSLEGAAYISTSGILTVTNKS---EGLIGHALYPNPLRFKTSNKSVAIDFRTNFVFSILPKYP   80 (653)
Q Consensus         6 ~~~~~f~~~~f~--~~~l~~~g~a~~~~~g~l~Lt~~~---~~~~Gr~~y~~pi~~~~~~~~~~~sF~t~F~f~i~~~~~   80 (653)
                      .+++||+|++|.  ..||+|+|||++.++|.|+||+..   ..++|||+|++||+||++.+++++||+|+|+|.|.++ .
T Consensus         1 s~~lsF~f~~F~~~~~~l~l~GdA~i~~~g~l~LT~~~~~~~~~~G~a~y~~Pi~l~~~~~~~~~sF~t~F~f~i~~~-~   79 (237)
T d1qnwa_           1 SDDLSFNFDKFVPNQKNIIFQGDASVSTTGVLQVTKVSKPTTTSIGRALYAAPIQIWDSITGKVASFATSFSFVVKAD-K   79 (237)
T ss_dssp             CCSEEEEESSCCTTCTTEEEEETCEECTTSCEESSCCC--CCCEEEEEEESSCEECBCTTTCCBCEEEEEEEEECCBS-S
T ss_pred             CCcEEEEcCCCCCCCCCEEEeeceEEcCCCeEEeccCCCCccccEEEEEECCCEEecCCCCcceeeEEEEEEEEEecC-C
Confidence            368999999996  378999999999889999999864   4689999999999999999999999999999999765 4


Q ss_pred             CCCCCceEEEEecCCCC-CCCCCCccccCCCcccCCCCCCCCceEEEEeecccccccC--CCCCCeeeEecCCCCcCCcc
Q 048419           81 DLGGQGLAFIIISTNRP-ENCLANQFLGLPNITMSSSTKFSTRMLAVEFDIIQNTELI--DINDNHVGIDISSLISSASE  157 (653)
Q Consensus        81 ~~~gdGlaF~l~~~~~~-~~~~~g~~lG~~~~~~~~~~~~~~~~vaVEFDt~~n~~~~--d~~~~Hvgid~ns~~s~~~~  157 (653)
                      ..+||||||+|+|.... +.+++++++|+.+..+   +...+++|||||||++|.+++  ||+++|||||+|++.|.++.
T Consensus        80 ~~ggdG~aF~l~p~~~~~~~~~~~~~~g~~~~~~---~~~~~~~vAVEFDT~~n~~~~~~d~~~nHvgid~ns~~s~~~~  156 (237)
T d1qnwa_          80 SDGVDGLAFFLAPANSQIPSGSSAGMFGLFSSSD---SKSSNQIIAVEFDTYFGKAYNPWDPDFKHIGIDVNSIKSIKTV  156 (237)
T ss_dssp             SCCCCEEEEEEEETTCCCCTTCCGGGTTTCSSSS---CCTTSCCEEEEEECCCCTTTCTTSCSSCEEEEEESSSSCSEEE
T ss_pred             CCCcceeEEEEeCCCCCCCCCCccccccccCCCC---CCCcccEEEEEeeceecCCcCCCCCCCCeEEEECCCCCccccc
Confidence            55899999999998744 6678888999988643   356789999999999997654  69999999999999988766


Q ss_pred             cCccccCCCCccccccCCCCceEEEEEecCCceEEEEEEeeCCCCCCCCCceeeeecCCcccccceEEeEecccCccc--
Q 048419          158 PASYYSGNNHRIPILLRSGDPIQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLIT--  235 (653)
Q Consensus       158 ~~~~~~~~~~~~~~~l~~g~~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~~l~~~~dL~~~l~~~~~vGFsastg~~~--  235 (653)
                      .+            ++.+|+.++|||+||+.+++|+|+++..+  +|..|+|++.|||+++|+++||||||||||...  
T Consensus       157 ~~------------~~~~G~~~~v~I~Yd~~~~~L~V~l~~~~--~~~~p~ls~~vDLs~~l~~~vyvGFSasTG~~~~~  222 (237)
T d1qnwa_         157 KW------------DWRNGEVADVVITYRAPTKSLTVCLSYPS--DGTSNIITASVDLKAILPEWVSVGFSGGVGNAAEF  222 (237)
T ss_dssp             EC------------CCCTTCCEEEEEEEEGGGTEEEEEEECTT--TCCEEEEEEECCHHHHSCSEEEEEEEEEESCGGGC
T ss_pred             cc------------ccCCCcEEEEEEEEcCCCcEEEEEEecCC--CCccceEEEEEChHHhCCCcEEEEEEeECCCCCCc
Confidence            53            46789999999999999999999998654  678899999999999999999999999999754  


Q ss_pred             ceeeecceeeeec
Q 048419          236 ASHNVHGWSISIG  248 (653)
Q Consensus       236 ~~~~i~sWsf~~~  248 (653)
                      |.|+|++|+|++.
T Consensus       223 q~h~I~sWsF~s~  235 (237)
T d1qnwa_         223 ETHDVLSWYFTSN  235 (237)
T ss_dssp             BCCEEEEEEEEEE
T ss_pred             cEeEEEEeEeEEe
Confidence            8999999999863

>d1gzca_ b.29.1.1 (A:) Legume lectin {Cockspur coral tree (Erythrina crista-galli) [TaxId: 49817]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Cockspur coral tree (Erythrina crista-galli) [TaxId: 49817]

Probab=100.00  E-value=2.3e-53  Score=419.65  Aligned_cols=223  Identities=29%  Similarity=0.467  Sum_probs=195.4

Q ss_pred             CceeEEeCCCC--CCCeEEecceEecCCCcEEecCCCC------CceEEEEcCCCeecccCCCCceeeeEEEEEEEEecC
Q 048419            7 DTTSFLYNGFL--HANLSLEGAAYISTSGILTVTNKSE------GLIGHALYPNPLRFKTSNKSVAIDFRTNFVFSILPK   78 (653)
Q Consensus         7 ~~~~f~~~~f~--~~~l~~~g~a~~~~~g~l~Lt~~~~------~~~Gr~~y~~pi~~~~~~~~~~~sF~t~F~f~i~~~   78 (653)
                      +++||+|++|+  .+||+|+|+|++.++|.|+||+...      +++|||+|++||+||++.+++++||+|+|+|.|...
T Consensus         2 ~~~sF~f~~F~~~~~nl~l~G~A~i~~~g~l~LT~~~~~~~~~~~~~Gr~~y~~Pv~l~~~~~~~~~sFst~F~f~i~~~   81 (239)
T d1gzca_           2 ETISFSFSEFEPGNDNLTLQGAALITQSGVLQLTKINQNGMPAWDSTGRTLYTKPVHMWDSTTGTVASFETRFSFSIEQP   81 (239)
T ss_dssp             EEEEEEESSCCTTCTTEEEEETCEECTTSCEESSCBCTTSCBCSSCEEEEEESSCEECBCTTTCCBCEEEEEEEEECCCC
T ss_pred             eeEEEEeCCCCCCCCCeEEeeeeEECCCCeEEccCCCCCCcccccceEEEEeCCCeEecCCCCCceeeEEEEEEEEEecC
Confidence            57899999997  3689999999998899999998653      488999999999999999999999999999999754


Q ss_pred             C-CCCCCCceEEEEecCCCCCCCCCCccccCCCcccCCCCCCCCceEEEEeecccccccCCCCCCeeeEecCCCCcCCcc
Q 048419           79 Y-PDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTKFSTRMLAVEFDIIQNTELIDINDNHVGIDISSLISSASE  157 (653)
Q Consensus        79 ~-~~~~gdGlaF~l~~~~~~~~~~~g~~lG~~~~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~~~Hvgid~ns~~s~~~~  157 (653)
                      . ...+||||||+|+|....+ ..++++||+++....   ...++.|||||||++|. ++||+++|||||+|++.|..+.
T Consensus        82 ~~~~~g~dG~aF~l~p~~~~~-~~~~g~lg~~~~~~~---~~~~~~vaVEFDT~~n~-~~d~~~~HvgI~vn~~~s~~t~  156 (239)
T d1gzca_          82 YTRPLPADGLVFFMGPTKSKP-AQGYGYLGVFNNSKQ---DNSYQTLAVEFDTFSNP-WDPPQVPHIGIDVNSIRSIKTQ  156 (239)
T ss_dssp             CSSSCCCEEEEEEEECSSCCC-CCCGGGTTTCSSSSC---CGGGCCEEEEEECSCCT-TSCSSSSEEEEEESSSSCSEEE
T ss_pred             CCCCCCCCeEEEEECCCCCCC-CCCcccccccccCCC---CCccceEEEEEEccccC-CCCCCCCEEEEEECCccccccC
Confidence            3 3568999999999987544 457889999876543   34577899999999994 7899999999999999988776


Q ss_pred             cCccccCCCCccccccCCCCceEEEEEecCCceEEEEEEeeCCCCCCCCCceeeeecCCcccccceEEeEecccCc---c
Q 048419          158 PASYYSGNNHRIPILLRSGDPIQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGL---I  234 (653)
Q Consensus       158 ~~~~~~~~~~~~~~~l~~g~~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~~l~~~~dL~~~l~~~~~vGFsastg~---~  234 (653)
                      ++            ++.+|+.++|||+||+.+++|+|++.+.+  +|..|+|++.|||+++|+++|||||||+||.   .
T Consensus       157 ~~------------~l~~G~~~~v~I~Yd~~~~~L~V~l~~~~--~~~~~~ls~~vdL~~~l~~~vyvGFSAsTG~~~~~  222 (239)
T d1gzca_         157 PF------------QLDNGQVANVVIKYDAPSKILHVVLVYPS--SGAIYTIAEIVDVKQVLPDWVDVGLSGATGAQRDA  222 (239)
T ss_dssp             EC------------CCCTTCEEEEEEEEETTTTEEEEEEECTT--TCCEEEEEEECCHHHHSCSEEEEEEEEEECSSTTC
T ss_pred             Cc------------cccCCCEEEEEEEEeCCCcEEEEEEecCC--CCcceeeeeEechHHhcCCcEEEEEEEEcCCCCCC
Confidence            53            57899999999999999999999998654  6888999999999999999999999999994   5


Q ss_pred             cceeeecceeeeec
Q 048419          235 TASHNVHGWSISIG  248 (653)
Q Consensus       235 ~~~~~i~sWsf~~~  248 (653)
                      .|.|+|++|+|++.
T Consensus       223 ~~~H~V~sWsF~s~  236 (239)
T d1gzca_         223 AETHDVYSWSFQAS  236 (239)
T ss_dssp             CCCCEEEEEEEEEE
T ss_pred             ceeeEEEEEEeEee
Confidence            68999999999975

>d2d3sa1 b.29.1.1 (A:1-237) Legume lectin {Winged bean (Psophocarpus tetragonolobus), basic agglutinin [TaxId: 3891]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Winged bean (Psophocarpus tetragonolobus), basic agglutinin [TaxId: 3891]

Probab=100.00  E-value=4.2e-53  Score=416.81  Aligned_cols=219  Identities=31%  Similarity=0.435  Sum_probs=192.0

Q ss_pred             CceeEEeCCCC--CCCeEEecceEecCCCcEEecCCC-----CCceEEEEcCCCeecccCCCCceeeeEEEEEEEEecC-
Q 048419            7 DTTSFLYNGFL--HANLSLEGAAYISTSGILTVTNKS-----EGLIGHALYPNPLRFKTSNKSVAIDFRTNFVFSILPK-   78 (653)
Q Consensus         7 ~~~~f~~~~f~--~~~l~~~g~a~~~~~g~l~Lt~~~-----~~~~Gr~~y~~pi~~~~~~~~~~~sF~t~F~f~i~~~-   78 (653)
                      +++||+|++|.  .+||+|+|||++.++|.|+||+..     .+++|||+|++||+||++.+++++||+|+|+|.|... 
T Consensus         1 ~t~sF~f~~F~~~~~~l~l~G~A~i~~~g~l~LT~~~~~~~~~~~~G~a~y~~pi~l~~~~~~~~~sF~t~F~f~i~~~~   80 (237)
T d2d3sa1           1 KTISFNFNQFHQNEEQLKLQRDARISSNSVLELTKVVNGVPTWNSTGRALYAKPVQVWDSTTGNVASFETRFSFSIRQPF   80 (237)
T ss_dssp             CEEEEEESSCCSSCTTEEEEETCEECTTSCEECSCEETTEECSSCEEEEEESSCEECBCTTTCCBCEEEEEEEEECCCSC
T ss_pred             CeEEEEeCCCCCCCCCEEEeeeeEeCCCCeEEcCCCCCCCcccccEEEEEeCCCEEeecCCCCceeeEEEEEEEEeecCC
Confidence            47899999995  378999999999878999999864     4699999999999999999999999999999999654 


Q ss_pred             CCCCCCCceEEEEecCCCCCCCCCCccccCCCcccCCCCCCCCceEEEEeecccccccCCCCCCeeeEecCCCCcCCccc
Q 048419           79 YPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTKFSTRMLAVEFDIIQNTELIDINDNHVGIDISSLISSASEP  158 (653)
Q Consensus        79 ~~~~~gdGlaF~l~~~~~~~~~~~g~~lG~~~~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~~~Hvgid~ns~~s~~~~~  158 (653)
                      +...+||||||+|+|.... .+..|++||+++..      ..+++|||||||++|.  +||++||||||+|++.|.++..
T Consensus        81 ~~~~g~dGlaFvl~p~~~~-~~~~gg~lG~~~~~------~~~~~vaVEFDT~~n~--~d~~~nHvgI~vns~~s~~~~~  151 (237)
T d2d3sa1          81 PRPHPADGLVFFIAPPNTQ-TGEGGGYFGIYNPL------SPYPFVAVEFDTFRNT--WDPQIPHIGIDVNSVISTKTVP  151 (237)
T ss_dssp             CSSCCCEEEEEEEECSSCC-CCBCGGGTTTBCTT------SCCCCEEEEEECSCCT--TCCSSSEEEEEESSSSCSEEEE
T ss_pred             CCCCCCCeEEEEeCCCCcc-CCccccccccccCC------CcCceEEEEEEeecCC--CCCCCCcEEEEcCCCccccccc
Confidence            3445789999999997654 45678899998753      3467899999999997  7999999999999999876544


Q ss_pred             CccccCCCCccccccCCCCceEEEEEecCCceEEEEEEeeCCCCCCCCCceeeeecCCcccccceEEeEecccCc-----
Q 048419          159 ASYYSGNNHRIPILLRSGDPIQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGL-----  233 (653)
Q Consensus       159 ~~~~~~~~~~~~~~l~~g~~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~~l~~~~dL~~~l~~~~~vGFsastg~-----  233 (653)
                                  +.+.+|+.++|||+||+.+++|+|++...+  +|..|+++..|||+.+|+++||||||||||.     
T Consensus       152 ------------~~l~~G~~~~v~I~Yd~~~~~L~V~l~~~~--~~~~~~ls~~vdL~~~l~~~vyvGFSasTG~~~~~~  217 (237)
T d2d3sa1         152 ------------FTLDNGGIANVVIKYDASTKILHVVLVFPS--LGTIYTIADIVDLKQVLPESVNVGFSAATGDPSGKQ  217 (237)
T ss_dssp             ------------CCCCTTCEEEEEEEEETTTTEEEEEEEETT--TTEEEEEEEECCHHHHSCSEEEEEEEEEECCGGGCC
T ss_pred             ------------eeecCCCEEEEEEEEECCCCEEEEEEEcCC--CCcccceeeEechHHhCCCcEEEEEEeECCCCccCc
Confidence                        357899999999999999999999998765  4677899999999999999999999999994     


Q ss_pred             --ccceeeecceeeeec
Q 048419          234 --ITASHNVHGWSISIG  248 (653)
Q Consensus       234 --~~~~~~i~sWsf~~~  248 (653)
                        ..|.|+|++|+|++.
T Consensus       218 ~~~~e~h~I~sWsFss~  234 (237)
T d2d3sa1         218 RNATETHDILSWSFSAS  234 (237)
T ss_dssp             TTCCCCCEEEEEEEEEE
T ss_pred             cccceeeEEEEeEeEee
Confidence              469999999999864

>d1g9fa_ b.29.1.1 (A:) Legume lectin {Soybean (Glycine max) [TaxId: 3847]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Soybean (Glycine max) [TaxId: 3847]

Probab=100.00  E-value=2.7e-52  Score=414.99  Aligned_cols=225  Identities=27%  Similarity=0.441  Sum_probs=191.7

Q ss_pred             cCceeEEeCCCCC--CCeEEecceEecCCCcEEecCCC------CCceEEEEcCCCeecccCCCCceeeeEEEEEEEEec
Q 048419            6 ADTTSFLYNGFLH--ANLSLEGAAYISTSGILTVTNKS------EGLIGHALYPNPLRFKTSNKSVAIDFRTNFVFSILP   77 (653)
Q Consensus         6 ~~~~~f~~~~f~~--~~l~~~g~a~~~~~g~l~Lt~~~------~~~~Gr~~y~~pi~~~~~~~~~~~sF~t~F~f~i~~   77 (653)
                      |.++||+|++|.+  .||+|+|+|++.++|.|+||+..      ..++|||+|++||+||++.+++++||+|+|+|.|..
T Consensus         1 a~~~sF~f~~F~~~~~~l~l~G~A~v~~~g~l~LT~~~~~~~~~~~~~Gra~y~~Pv~l~~~~~~~~~sf~t~f~F~i~~   80 (251)
T d1g9fa_           1 AETVSFSWNKFVPKQPNMILQGDAIVTSSGKLQLNKVDENGTPKPSSLGRALYSTPIHIWDKETGSVASFAASFNFTFYA   80 (251)
T ss_dssp             CEEEEEEESSCCC-CTTEEEEETCBCCTTC-CBCSCBC---CBCTTCEEEEEESSCEECBCC-CCCBCEEEEEEEEEEEC
T ss_pred             CceEEEEeCCCCCCCCCEEEeeeEEECCCCEEEecCCcCCCcccCceEEEEEeCCCEEccCCCCccceeeEEEEEEEEec
Confidence            4689999999973  68999999999889999999864      358999999999999999999999999999999998


Q ss_pred             CCCCCCCCceEEEEecCCCCCCCCCCccccCCCcccCCCCCCCCceEEEEeecccccccCCCCCCeeeEecCCCCcCCcc
Q 048419           78 KYPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTKFSTRMLAVEFDIIQNTELIDINDNHVGIDISSLISSASE  157 (653)
Q Consensus        78 ~~~~~~gdGlaF~l~~~~~~~~~~~g~~lG~~~~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~~~Hvgid~ns~~s~~~~  157 (653)
                      .+...+||||||+|+|....+ +..+|+||+++..     ...++.|||||||++|.  +||+++|||||+|++.|..+.
T Consensus        81 ~~~~~~gDGlAFvl~p~~~~~-~~~~g~lG~~~~~-----~~~~~~vaVEFDT~~n~--~D~~~~Hvgi~~n~~~s~~~~  152 (251)
T d1g9fa_          81 PDTKRLADGLAFFLAPIDTKP-QTHAGYLGLFNEN-----ESGDQVVAVEFDTFRNS--WDPPNPHIGINVNSIRSIKTT  152 (251)
T ss_dssp             SCC--CCEEEEEEEEETTCCC-CCCGGGTTTCCTT-----SCCCSCEEEEEECC-CT--TSCSSSEEEEEESSSSCSEEE
T ss_pred             CCCCCCCCceEEEEecCCCCC-CCccCccCccccc-----CCCcceEEEEEecccCC--CCCCCCcEeEEecCccccccc
Confidence            877889999999999987544 5677899998753     33467899999999997  799999999999999987665


Q ss_pred             cCccccCCCCccccccCCCCceEEEEEecCCceEEEEEEeeCCCCCCCCCceeeeecCCcccccceEEeEecccCccc--
Q 048419          158 PASYYSGNNHRIPILLRSGDPIQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLIT--  235 (653)
Q Consensus       158 ~~~~~~~~~~~~~~~l~~g~~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~~l~~~~dL~~~l~~~~~vGFsastg~~~--  235 (653)
                      .            +++.+|+.++|||+||+.+++|+|++....  +|..|+++..|||+.+|+++||||||||||...  
T Consensus       153 ~------------~~l~~g~~~~v~I~Yd~~~~~L~v~l~~~~--~~~~~~l~~~vdL~~~l~~~~yvGFSAsTG~~~~~  218 (251)
T d1g9fa_         153 S------------WDLANNKVAKVLITYDASTSLLVASLVYPS--QRTSNILSDVVDLKTSLPEWVRIGFSAATGLDIPG  218 (251)
T ss_dssp             E------------CCCCTTCCEEEEEEEETTTTEEEEEEEEGG--GTEEEEEEEECCC-CCSCSEEEEEEEEEECSSSCC
T ss_pred             c------------eEecCCCEEEEEEEEECCccEEEEEEecCC--CCcceeEEEEecchhhCCCcEEEEEEeecCCCCCC
Confidence            4            367899999999999999999999997643  678889999999999999999999999999754  


Q ss_pred             ceeeecceeeeecCcCC
Q 048419          236 ASHNVHGWSISIGGKAQ  252 (653)
Q Consensus       236 ~~~~i~sWsf~~~~~~~  252 (653)
                      |.|+|++|+|++..+++
T Consensus       219 ~~h~I~sWsF~s~~~~~  235 (251)
T d1g9fa_         219 ESHDVLSWSFASNLPHA  235 (251)
T ss_dssp             CEEEEEEEEEEEEECC-
T ss_pred             ceeEEEEeEeECCCCCC
Confidence            88999999999875443

>d1f9ka_ b.29.1.1 (A:) Legume lectin {Winged bean (Psophocarpus tetragonolobus), acidic lectin [TaxId: 3891]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Winged bean (Psophocarpus tetragonolobus), acidic lectin [TaxId: 3891]

Probab=100.00  E-value=8.4e-52  Score=407.08  Aligned_cols=218  Identities=29%  Similarity=0.441  Sum_probs=189.8

Q ss_pred             CceeEEeCCCC--CCCeEEecceEecCCCcEEecCCC------CCceEEEEcCCCeecccCCCCceeeeEEEEEEEEecC
Q 048419            7 DTTSFLYNGFL--HANLSLEGAAYISTSGILTVTNKS------EGLIGHALYPNPLRFKTSNKSVAIDFRTNFVFSILPK   78 (653)
Q Consensus         7 ~~~~f~~~~f~--~~~l~~~g~a~~~~~g~l~Lt~~~------~~~~Gr~~y~~pi~~~~~~~~~~~sF~t~F~f~i~~~   78 (653)
                      +++||+|++|.  .+||+|+|||++.++|.|+||+..      .+++|||+|++||+||++.+++++||+|+|+|.|.+.
T Consensus         1 ~~~SF~f~~F~~~~~~l~l~G~A~~~~~g~l~LT~~~~~~~~~~~~~Gra~y~~Pv~l~~~~~~~~~sFsT~F~f~i~~~   80 (234)
T d1f9ka_           1 ETQSFNFDHFEENSKELNLQRQASIKSNGVLELTKLTKNGVPVWKSTGRALYAEPIKIWDSTTGNVASFETRFSFNITQP   80 (234)
T ss_dssp             CEEEEEESSCCSSCTTEEEEETCEECTTSCEECSCSEETTEECCSCEEEEEESSCEECBCTTTCCBCEEEEEEEEEEECC
T ss_pred             CceEEEeCCCCCCCCCEEEeeeEEEcCCCEEEeecCCCCCCcccceeEEEEeCCCEEeeCCCCCcCcceEEEEEEEEECC
Confidence            47899999996  478999999999889999999874      3589999999999999999999999999999999765


Q ss_pred             C-CCCCCCceEEEEecCCCCCCCCCCccccCCCcccCCCCCCCCceEEEEeecccccccCCCCCCeeeEecCCCCcCCcc
Q 048419           79 Y-PDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTKFSTRMLAVEFDIIQNTELIDINDNHVGIDISSLISSASE  157 (653)
Q Consensus        79 ~-~~~~gdGlaF~l~~~~~~~~~~~g~~lG~~~~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~~~Hvgid~ns~~s~~~~  157 (653)
                      + ...+||||||+|+|... +.+..|+++|+++...      .++.|||||||++|.  +||++||||||+|++.|.++.
T Consensus        81 ~~~~~g~dG~aF~i~p~~~-~~~~~g~~~g~~~~~~------~~~~vaVEFDT~~n~--~Dp~~nHvgi~~ns~~s~~~~  151 (234)
T d1f9ka_          81 YAYPEPADGLTFFMVPPNS-PQGEDGGNLGVFKPPE------GDNAFAVEFDTFQNT--WDPQVPHIGIDVNSIVSSKTL  151 (234)
T ss_dssp             CSSSCCCEEEEEEEECTTC-CCCCSGGGTTTCCSSC------CSCCEEEEEECSCCT--TCCSSSEEEEEESSSSCSEEE
T ss_pred             CCCCCccceEEEEECCCCC-CcccccccccccCCCC------ccceEEEEEeccccC--CCCCCCcEeEecCCccccccc
Confidence            3 34578999999999775 4456788899887543      356799999999997  899999999999999887665


Q ss_pred             cCccccCCCCccccccCCCCceEEEEEecCCceEEEEEEeeCCCCCCCCCceeeeecCCcccc--cceEEeEecccCc--
Q 048419          158 PASYYSGNNHRIPILLRSGDPIQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVID--EYMYTGFSASTGL--  233 (653)
Q Consensus       158 ~~~~~~~~~~~~~~~l~~g~~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~~l~~~~dL~~~l~--~~~~vGFsastg~--  233 (653)
                      +            +++.+|+.++|||+||+.+++|+|++....  ++..|+|++.|||+.+|+  ++||||||||||.  
T Consensus       152 ~------------~~l~~G~~~~v~I~Yd~~~~~l~V~l~~~~--~~~~~~ls~~idL~~~l~~~~~v~vGFSasTG~~~  217 (234)
T d1f9ka_         152 H------------FQLENGGVANVVIKYDSPTKILNVVLAFHS--VGTVYTLSNIVDLKQEFPNSEWVNVGLSATTGYQK  217 (234)
T ss_dssp             E------------CCCCTTCCEEEEEEEETTTTEEEEEEEETT--TTEEEEEEEECCHHHHSTTCSEEEEEEEEEECSST
T ss_pred             c------------ccccCCCEEEEEEEEcCCCcEEEEEEEeCC--CCccceEEEEEcHHHhcCCCCEEEEEEEeecCCCC
Confidence            4            367899999999999999999999998765  466789999999999996  6799999999994  


Q ss_pred             -ccceeeecceeeee
Q 048419          234 -ITASHNVHGWSISI  247 (653)
Q Consensus       234 -~~~~~~i~sWsf~~  247 (653)
                       ..|.|+|++|+|++
T Consensus       218 ~~~~~h~I~sWsF~s  232 (234)
T d1f9ka_         218 NAVETHEIISWSFTS  232 (234)
T ss_dssp             TCCCEEEEEEEEEEE
T ss_pred             CceeeeEEEEEEeEE
Confidence             46899999999986

>d1g8wa_ b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Phytohemagglutinin-L, PHA-L, also arcelin
species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]

Probab=100.00  E-value=2.9e-51  Score=403.36  Aligned_cols=222  Identities=28%  Similarity=0.444  Sum_probs=195.9

Q ss_pred             cCceeEEeCCCCCCCeEEecceEecCCCcEEecCCC------CCceEEEEcCCCeecccCCCCceeeeEEEEEEEEecCC
Q 048419            6 ADTTSFLYNGFLHANLSLEGAAYISTSGILTVTNKS------EGLIGHALYPNPLRFKTSNKSVAIDFRTNFVFSILPKY   79 (653)
Q Consensus         6 ~~~~~f~~~~f~~~~l~~~g~a~~~~~g~l~Lt~~~------~~~~Gr~~y~~pi~~~~~~~~~~~sF~t~F~f~i~~~~   79 (653)
                      +++++|+|++|+..||+|+|||++.++|.|+||+..      .+++|||+|++||+||++.++.++||+|+|+|.|.+.+
T Consensus         1 ~~~~sF~f~~F~~~nl~l~GdA~i~~~g~l~LT~~~~~~~~~~~~~G~~~y~~Pi~l~~~~~~~~~sF~t~f~f~i~~~~   80 (233)
T d1g8wa_           1 SNDIYFNFQRFNETNLILQRDASVSSSGQLRLTNLNGNGEPRVGSLGRAFYSAPIQIWDNTTGTVASFATSFTFNIQVPN   80 (233)
T ss_dssp             CEEEEEEESSCCGGGEEEEETCEECTTSCEECSCCCSTTCCCTTCEEEEEESSCEECBCTTTCCBEEEEEEEEEECCCCS
T ss_pred             CCceEEECCCCCcCcEEEeccEEECCCCEEEecCCCCCCCcccceeEEEEcCCCeEeecCCCCceeeEEEEEEEEEecCC
Confidence            468999999999999999999999889999999754      35899999999999999999999999999999998877


Q ss_pred             CCCCCCceEEEEecCCCCCCCCCCccccCCCcccCCCCCCCCceEEEEeecccccccCCCCCCeeeEecCCCCcCCcccC
Q 048419           80 PDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTKFSTRMLAVEFDIIQNTELIDINDNHVGIDISSLISSASEPA  159 (653)
Q Consensus        80 ~~~~gdGlaF~l~~~~~~~~~~~g~~lG~~~~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~~~Hvgid~ns~~s~~~~~~  159 (653)
                      ...+||||||+|+|....+ +..|++||+++..     ...++.|||||||+.|.+ +||+++|||||+|++.+..+..+
T Consensus        81 ~~~~gDGlAF~l~~~~~~~-g~~g~~lG~~~g~-----~~~~~~vaVEFDT~~N~~-~d~~~~Hvgi~~n~~~s~~~~~~  153 (233)
T d1g8wa_          81 NAGPADGLAFALVPVGSQP-KDKGGFLGLFDGS-----NSNFHTVAVEFDTLYNKD-WDPTERHIGIDVNSIRSIKTTRW  153 (233)
T ss_dssp             SCBCCEEEEEEEEETTCCC-CCCGGGTTTCCSS-----CCCCCCEEEEEECSCCTT-TCCSSCEEEEEESSSSCSEEEEC
T ss_pred             CCCCCCeEEEEEecCCCCC-CcccccCCccccC-----CCcccEEEEEeecccCCC-CCCCCCeEEEECCCcceeeeccc
Confidence            7778999999999987644 4678899998643     234678999999999977 59999999999999988766543


Q ss_pred             ccccCCCCccccccCCCCceEEEEEecCCceEEEEEEeeCCCCCCCCCceeeeecCCcccccceEEeEecccCc---ccc
Q 048419          160 SYYSGNNHRIPILLRSGDPIQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGL---ITA  236 (653)
Q Consensus       160 ~~~~~~~~~~~~~l~~g~~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~~l~~~~dL~~~l~~~~~vGFsastg~---~~~  236 (653)
                                  ++.+|+.++|||+|++.+++|.|++...+  ++..|+++..+||+.+||++|||||||+||.   ..|
T Consensus       154 ------------~~~~g~~~~~~I~yd~~~~~l~v~l~~~~--~~~~~~l~~~vdL~~~l~~~~yvGFSAsTG~~~~~~~  219 (233)
T d1g8wa_         154 ------------DFVNGENAEVLITYDSSTNLLVASLVYPS--QKTSFIVSDTVDLKSVLPEWVSVGFSATTGINKGNVE  219 (233)
T ss_dssp             ------------CCCTTCCEEEEEEEETTTTEEEEEEEETT--TTEEEEEEEECCHHHHSCSEEEEEEEEEECSSTTBCC
T ss_pred             ------------cccCCcEEEEEEEEeCCCcEEEEEEEeCC--CCCcEEEEEEechhHcCCCcEEEEEEEEcCCCCCCce
Confidence                        56799999999999999999999998755  5777899999999999999999999999994   457


Q ss_pred             eeeecceeeeec
Q 048419          237 SHNVHGWSISIG  248 (653)
Q Consensus       237 ~~~i~sWsf~~~  248 (653)
                      .|+|++|+|++.
T Consensus       220 ~h~I~sWsFss~  231 (233)
T d1g8wa_         220 TNDVLSWSFASK  231 (233)
T ss_dssp             CCEEEEEEEEEE
T ss_pred             eeEEEEEEEEEE
Confidence            899999999863

>d1g7ya_ b.29.1.1 (A:) Legume lectin {Horse gram (Dolichos biflorus), different isoforms [TaxId: 3840]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Horse gram (Dolichos biflorus), different isoforms [TaxId: 3840]

Probab=100.00  E-value=3.2e-51  Score=408.81  Aligned_cols=223  Identities=27%  Similarity=0.453  Sum_probs=196.3

Q ss_pred             cCceeEEeCCCCCCCeEEecceEecCCCcEEecCCC------CCceEEEEcCCCeecccCCCCceeeeEEEEEEEEecCC
Q 048419            6 ADTTSFLYNGFLHANLSLEGAAYISTSGILTVTNKS------EGLIGHALYPNPLRFKTSNKSVAIDFRTNFVFSILPKY   79 (653)
Q Consensus         6 ~~~~~f~~~~f~~~~l~~~g~a~~~~~g~l~Lt~~~------~~~~Gr~~y~~pi~~~~~~~~~~~sF~t~F~f~i~~~~   79 (653)
                      |+.+||+|++|+..+|+|+|||++. ++.|+||+..      ..++|||+|++||+||++.+++++||+|+|+|.|.+..
T Consensus         1 a~~~sF~f~~F~~~~l~l~GdA~~~-~~~l~LT~~~~~~~~~~~~~G~a~y~~pv~l~~~~~~~~~sF~t~F~F~i~~~~   79 (253)
T d1g7ya_           1 ADIQSFSFKNFNSSSFILQGDATVS-SSKLRLTKVKGNGLPTLSSLGRAFYSSPIQIYDKSTGAVASWATSFTANIFAPN   79 (253)
T ss_dssp             CEEEEEEESSCCSSCEEEEETCEEE-TTEEECSCBCTTSCBCSSCEEEEEESSCEECBCTTTCCBCEEEEEEEEECCCSS
T ss_pred             CcccEEecCCCCcccEEEEeeeEEc-CCEEEeCCCCCCCCcccceeEEEEeCCCeEeecCCCCceeeEEEEEEEEEecCC
Confidence            4578999999999999999999996 7889999764      35899999999999999999999999999999998877


Q ss_pred             CCCCCCceEEEEecCCCCCCCCCCccccCCCcccCCCCCCCCceEEEEeecccccccCCCCCCeeeEecCCCCcCCcccC
Q 048419           80 PDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTKFSTRMLAVEFDIIQNTELIDINDNHVGIDISSLISSASEPA  159 (653)
Q Consensus        80 ~~~~gdGlaF~l~~~~~~~~~~~g~~lG~~~~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~~~Hvgid~ns~~s~~~~~~  159 (653)
                      ...+||||||+|+|....+. ..+|++|+++..+.   ...++.+||||||++|.+ +||+++|||||+|++.|..++++
T Consensus        80 ~~~ggDGlAF~l~~~~~~~~-~~~g~lgl~~~~~~---~~~~~~vaVEFDT~~n~~-~d~~~~Hvgi~~ns~~s~~~~~~  154 (253)
T d1g7ya_          80 KSSSADGIAFALVPVGSEPK-SNSGFLGVFDSDVY---DNSAQTVAVEFDTFSNTD-WDPTSRHIGIDVNSIKSIRTASW  154 (253)
T ss_dssp             GGGCCCEEEEEEEETTCCCC-CCGGGTTTCSCSSC---CGGGCCEEEEEECSCCTT-TCCSSCEEEEEESSSSCSEEEEC
T ss_pred             CCCCCCceEEEEeCCCCCCC-CCcccccccccCCC---CCcCceEEEEEeceecCC-CCCCCCcEEEeeCCcccccccCC
Confidence            67799999999999876544 56789999876443   345678999999999976 59999999999999998876553


Q ss_pred             ccccCCCCccccccCCCCceEEEEEecCCceEEEEEEeeCCCCCCCCCceeeeecCCcccccceEEeEecccC---cccc
Q 048419          160 SYYSGNNHRIPILLRSGDPIQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTG---LITA  236 (653)
Q Consensus       160 ~~~~~~~~~~~~~l~~g~~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~~l~~~~dL~~~l~~~~~vGFsastg---~~~~  236 (653)
                                  .+.+|+.++|||+|++.+++|+|++....  +|..|++++.+||+.+||++|||||||+||   ...|
T Consensus       155 ------------~~~~g~~~~v~I~Yd~~~~~L~v~l~~~~--~~~~~~ls~~vdL~~~l~~~~yvGFSAsTG~~~~~~~  220 (253)
T d1g7ya_         155 ------------GLANGQNAEILITYNAATSLLVASLVHPS--RRTSYIVSERVDITNELPEYVSIGFSATTGLSEGYTE  220 (253)
T ss_dssp             ------------CCCTTSEEEEEEEEETTTTEEEEEEEETT--TTEEEEEEEECCHHHHSCSEEEEEEEEECCSSSSCCC
T ss_pred             ------------CccCCCEEEEEEEEeCCcEEEEEEEecCC--CCCceEEEEEechhhcCCCcEEEEEEeEcCCCCCccc
Confidence                        57899999999999999999999997643  678889999999999999999999999999   4579


Q ss_pred             eeeecceeeeec
Q 048419          237 SHNVHGWSISIG  248 (653)
Q Consensus       237 ~~~i~sWsf~~~  248 (653)
                      .|+|++|+|++.
T Consensus       221 ~H~IlsWsF~s~  232 (253)
T d1g7ya_         221 THDVLSWSFASK  232 (253)
T ss_dssp             CCEEEEEEEEEE
T ss_pred             ccEEEEEEeEEe
Confidence            999999999864

>d1dbna_ b.29.1.1 (A:) Legume lectin {Maackia amurensis, leukoagglutinin [TaxId: 37501]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Maackia amurensis, leukoagglutinin [TaxId: 37501]

Probab=100.00  E-value=7.1e-51  Score=403.90  Aligned_cols=226  Identities=28%  Similarity=0.443  Sum_probs=197.9

Q ss_pred             cCceeEEeCCCC--CCCeEEecceEecCCCcEEecCCC-----CCceEEEEcCCCeecccCCCCceeeeEEEEEEEEecC
Q 048419            6 ADTTSFLYNGFL--HANLSLEGAAYISTSGILTVTNKS-----EGLIGHALYPNPLRFKTSNKSVAIDFRTNFVFSILPK   78 (653)
Q Consensus         6 ~~~~~f~~~~f~--~~~l~~~g~a~~~~~g~l~Lt~~~-----~~~~Gr~~y~~pi~~~~~~~~~~~sF~t~F~f~i~~~   78 (653)
                      ++++||+|++|.  ..||+|+|||++.++|.|+||++.     ..++|||+|++||+||++.+++++||+|+|+|.|.+.
T Consensus         1 ~~~~sF~f~~F~~~~~~l~l~G~A~v~~~g~l~LT~~~~~~~~~~~~G~a~y~~pi~l~~~~~~~~~sFst~F~F~i~~~   80 (239)
T d1dbna_           1 SDELSFTINNFVPNEADLLFQGEASVSSTGVLQLTKVENGQPQKYSVGRALYAAPVRIWGNTTGSVASFSTSFTFVVKAP   80 (239)
T ss_dssp             CCEEEEEESSCCTTCTTEEEEETCEECTTSCEESSCEETTEECSSCEEEEEESSCEECBCTTTCCBCEEEEEEEEECCCS
T ss_pred             CCceEEEeCCCCCCCCCEEEeeeeEECCCCEEEccCCCCCCcccceeEEEeecCCEEccCCCCccceEEEEEEEEEEECC
Confidence            468999999996  478999999999889999999764     4579999999999999999999999999999999888


Q ss_pred             CCCCCCCceEEEEecCCC-CCCCCCCccccCCCcccCCCCCCCCceEEEEeeccccccc--CCCCCCeeeEecCCCCcCC
Q 048419           79 YPDLGGQGLAFIIISTNR-PENCLANQFLGLPNITMSSSTKFSTRMLAVEFDIIQNTEL--IDINDNHVGIDISSLISSA  155 (653)
Q Consensus        79 ~~~~~gdGlaF~l~~~~~-~~~~~~g~~lG~~~~~~~~~~~~~~~~vaVEFDt~~n~~~--~d~~~~Hvgid~ns~~s~~  155 (653)
                      ....+||||||+|+|... .+.+.+|++||+.+..+   .+..++.+||||||++|.++  +||+.+|||||+|++.|..
T Consensus        81 ~~~~~gdG~AF~l~~~~~~~~~~~~g~~lGl~~~~~---~~~~~~~~aVEfDT~~n~~~~~~d~~~~hvgid~n~~~s~~  157 (239)
T d1dbna_          81 NPDITSDGLAFYLAPPDSQIPSGSVSKYLGLFNNSN---SDSSNQIVAVEFDTYFAHSYDPWDPNYRHIGIDVNGIESIK  157 (239)
T ss_dssp             STTSCCEEEEEEEECTTCCCCSSSCGGGTTSCSSSC---CCTTSCCEEEEEECCCCTTTCTTSCSSCEEEEEESSSSCSE
T ss_pred             CCCCCCCCEEEEEeCCCccCCcccCccccccccccC---CCcccCeeeeEEeeeecCCCCCCCCCCceeeEEcCCccccc
Confidence            777899999999998774 35667889999998654   34568899999999999765  4899999999999999877


Q ss_pred             cccCccccCCCCccccccCCCCceEEEEEecCCceEEEEEEeeCCCCCCCCCceeeeecCCcccccceEEeEecccCcc-
Q 048419          156 SEPASYYSGNNHRIPILLRSGDPIQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLI-  234 (653)
Q Consensus       156 ~~~~~~~~~~~~~~~~~l~~g~~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~~l~~~~dL~~~l~~~~~vGFsastg~~-  234 (653)
                      +..+            .+.+|+.+.|||+|++.+++|.|++....  ++..|.++.++||+++|+++||||||||||.. 
T Consensus       158 ~~~~------------~~~~g~~~~~~i~y~~~~~~l~v~l~~~~--~~~~~~ls~~vdL~~~l~~~vyvGFSAsTG~~~  223 (239)
T d1dbna_         158 TVQW------------DWINGGVAFATITYLAPNKTLIASLVYPS--NQTTFSVAASVDLKEILPEWVRVGFSAATGYPT  223 (239)
T ss_dssp             EEEC------------CCCTTCCEEEEEEEEGGGTEEEEEEEETT--TTEEEEEEEECCHHHHSCSEEEEEEEEEECSGG
T ss_pred             cccc------------eEeCCceeEEEEEEcCCCCEEEEEEEecC--CCccEEEEEecchHHhcCCcEEEEEEEeCCCCC
Confidence            6554            34689999999999999999999998754  56778999999999999999999999999964 


Q ss_pred             -cceeeecceeeeec
Q 048419          235 -TASHNVHGWSISIG  248 (653)
Q Consensus       235 -~~~~~i~sWsf~~~  248 (653)
                       .|.|+|++|+|++.
T Consensus       224 ~~~~H~I~sWsFss~  238 (239)
T d1dbna_         224 EVETHDVLSWSFTST  238 (239)
T ss_dssp             GCCCCEEEEEEEEEE
T ss_pred             CcceeEEEEEEeEEe
Confidence             47899999999863

>d1v6ia_ b.29.1.1 (A:) Legume lectin {Peanut (Arachis hypogaea) [TaxId: 3818]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Peanut (Arachis hypogaea) [TaxId: 3818]

Probab=100.00  E-value=2.3e-50  Score=397.62  Aligned_cols=224  Identities=27%  Similarity=0.356  Sum_probs=190.7

Q ss_pred             cCceeEEeCCCCC--CCeEEecceEecCCCcEEecCCC-CCceEEEEcCCCeecccCCCCceeeeEEEEEEEEecCCCCC
Q 048419            6 ADTTSFLYNGFLH--ANLSLEGAAYISTSGILTVTNKS-EGLIGHALYPNPLRFKTSNKSVAIDFRTNFVFSILPKYPDL   82 (653)
Q Consensus         6 ~~~~~f~~~~f~~--~~l~~~g~a~~~~~g~l~Lt~~~-~~~~Gr~~y~~pi~~~~~~~~~~~sF~t~F~f~i~~~~~~~   82 (653)
                      +.++||+|++|.+  .+|+|+|||.+.++|.|+||++. .+++|||+|++||+||++.+++++||+|+|+|.|.+.+...
T Consensus         1 a~~~sF~~~~F~~~~~~l~l~GdA~i~~~g~l~LT~~~~~~~~G~a~y~~Pi~l~~~~~~~~~sf~t~f~f~i~~~~~~~   80 (232)
T d1v6ia_           1 AETVSFNFNSFSEGNPAINFQGDVTVLSNGNIQLTNLNKVNSVGRVLYAMPVRIWSSATGNVASFLTSFSFEMKDIKDYD   80 (232)
T ss_dssp             CEEEEEEESSCCTTCTTEEEEESCEECTTSCEECSCTTSTTCEEEEEESSCEECBCTTTCCBCEEEEEEEEEEECCSSSB
T ss_pred             CccEEEECCCCCCCCCCEEEeeeeEEcCCCEEEeCCCCCCCceEEEEcCCCEEccCCCCCccceeEEEEEEEeccCCCCC
Confidence            4689999999986  45999999999889999999865 58999999999999999999999999999999999887788


Q ss_pred             CCCceEEEEecCCCCCCCCCCccccCCCcccCCCCCCCCceEEEEeecccccccCCCCCCeeeEecCCCCcCCcccCccc
Q 048419           83 GGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTKFSTRMLAVEFDIIQNTELIDINDNHVGIDISSLISSASEPASYY  162 (653)
Q Consensus        83 ~gdGlaF~l~~~~~~~~~~~g~~lG~~~~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~~~Hvgid~ns~~s~~~~~~~~~  162 (653)
                      +||||||+|+|....... +++.+|+.+..+   .+..++.|||||||++|.+++||+++|||||+|++.+.....    
T Consensus        81 ~gDG~AF~l~~~~~~~~~-~~~~g~~~~~~~---~~~~~~~~aVEfDT~~n~~~~d~~~~Higid~n~~~s~~~~~----  152 (232)
T d1v6ia_          81 PADGIIFFIAPEDTQIPA-GSIGGGTLGVSD---TKGAGHFVGVEFDTYSNSEYNDPPTDHVGIDVNSVDSVKTVP----  152 (232)
T ss_dssp             CCCEEEEEEEETTCCCCT-TCCCGGGTTTSC---TTSEEEEEEEEEECSCCGGGTCCSSCEEEEEEEESSCSEEEE----
T ss_pred             CCCeEEEEEECCCCCCCC-CccCCccccccc---CCCCCceEEEEEEeEecCCCCCCCCccEeEeeCCcccccccc----
Confidence            999999999997754332 222222222211   345678999999999999889999999999999988776543    


Q ss_pred             cCCCCccccccCCCCceEEEEEecCCceEEEEEEeeCCCCCCCCCceeeeecCCcccccceEEeEecccCc-ccceeeec
Q 048419          163 SGNNHRIPILLRSGDPIQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGL-ITASHNVH  241 (653)
Q Consensus       163 ~~~~~~~~~~l~~g~~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~~l~~~~dL~~~l~~~~~vGFsastg~-~~~~~~i~  241 (653)
                              .++.+|+.++|||+|++.+++|+|++...   ++..|.++..|||+.+||++|||||||+||. ..|.|+|+
T Consensus       153 --------~~~~~g~~~~v~I~Yd~~~~~L~V~~~~~---~~~~~~l~~~vdL~~~l~~~vyvGFSAsTG~~~~~~H~I~  221 (232)
T d1v6ia_         153 --------WNSVSGAVVKVTVIYDSSTKTLSVAVTND---NGDITTIAQVVDLKAKLPERVKFGFSASGSLGGRQIHLIR  221 (232)
T ss_dssp             --------CCCCTTCEEEEEEEEETTTTEEEEEEECT---TSCEEEEEEECCHHHHSCSEEEEEEEEECCSSBCCEEEEE
T ss_pred             --------cccCCCCEEEEEEEEeCCceEEEEEEecC---CCCcceEEEEEchhhccCCcEEEEEEEECCCCCCcccEEE
Confidence                    35689999999999999999999998854   4567789999999999999999999999996 46999999


Q ss_pred             ceeeeec
Q 048419          242 GWSISIG  248 (653)
Q Consensus       242 sWsf~~~  248 (653)
                      +|+|++.
T Consensus       222 sWsFss~  228 (232)
T d1v6ia_         222 SWSFTST  228 (232)
T ss_dssp             EEEEEEE
T ss_pred             EeEeEEe
Confidence            9999864

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=5.3e-51  Score=419.61  Aligned_cols=265  Identities=28%  Similarity=0.445  Sum_probs=204.0

Q ss_pred             cCHHHHHHhhcC---------cCcceeeeeeCcEEEEEEEeCCCCc---EEEEEEeccC-chhhHHHHHHHHHHHhhcCC
Q 048419          320 FKYAELASVTKG---------FGEQNLVGSGGFGRVYRGLMPSLGL---EVAIKRIGHN-SQQGMKEFVAEIMSMGRLRH  386 (653)
Q Consensus       320 f~~~el~~at~~---------f~~~~~LG~G~fg~Vy~~~~~~~~~---~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H  386 (653)
                      ++|+++..++++         |+..++||+|+||+||+|.+..+++   .||||++... .....+.|.+|+++|++++|
T Consensus         7 ~t~~d~~~a~~~f~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H   86 (299)
T d1jpaa_           7 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDH   86 (299)
T ss_dssp             GGSSSHHHHHHHHSCBCCGGGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCC
T ss_pred             CCHHHHHHHHhhhchhhChhhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCC
Confidence            455566655544         4456899999999999999876553   6899998654 45556789999999999999


Q ss_pred             CceeeeeeeecccceeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcE
Q 048419          387 RNLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNI  466 (653)
Q Consensus       387 ~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NI  466 (653)
                      ||||+++|+|.+.+.+++|||||++|+|.+++....    ..++|.++++++.|||+||.|||+   ++|+||||||+||
T Consensus        87 pnIv~l~g~~~~~~~~~iv~Ey~~~g~L~~~~~~~~----~~l~~~~~~~i~~qia~gl~yLH~---~~iiHrDlKp~NI  159 (299)
T d1jpaa_          87 PNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQND----GQFTVIQLVGMLRGIAAGMKYLAD---MNYVHRDLAARNI  159 (299)
T ss_dssp             TTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHTTT----TCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGE
T ss_pred             CCCccEEEEEeeCCEEEEEEEecCCCcceeeecccc----CCCCHHHHHHHHHHHHHHHHHHhh---CCCccCccccceE
Confidence            999999999999999999999999999999887643    358999999999999999999999   9999999999999


Q ss_pred             EEcCCCcEEEEeecCcccccCCCCC----cccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhh
Q 048419          467 LLDTYLNAKLGDFGLAKIYEHGANP----QTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKA  541 (653)
Q Consensus       467 ll~~~~~~kl~DfGla~~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~  541 (653)
                      ||+.++++||+|||+++........    ......||+.|+|||.+.+..++.++|||||||++|||+| |+.||.....
T Consensus       160 Ll~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~  239 (299)
T d1jpaa_         160 LVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTN  239 (299)
T ss_dssp             EECTTCCEEECCC-----------------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH
T ss_pred             EECCCCcEEECCcccceEccCCCCcceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCCH
Confidence            9999999999999999876543221    1222457899999999999999999999999999999998 8999976544


Q ss_pred             hhHHHHHHHHHhhhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          542 AAELLLVDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       542 ~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                      .+   +...+....           ++ ..+......+.+|+.+||+.||.+||||.||++.|+.
T Consensus       240 ~~---~~~~i~~~~-----------~~-~~~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~L~~  289 (299)
T d1jpaa_         240 QD---VINAIEQDY-----------RL-PPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDK  289 (299)
T ss_dssp             HH---HHHHHHTTC-----------CC-CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred             HH---HHHHHHcCC-----------CC-CCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence            22   222222111           01 1122345678899999999999999999999999864

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-50  Score=410.82  Aligned_cols=258  Identities=23%  Similarity=0.317  Sum_probs=208.0

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc-hhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEec
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS-QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDY  408 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~  408 (653)
                      ++|+..+.||+|+||+||+|++..+|+.||||++.... .+..+.+.+|++++++++|||||++++++.+.+.++|||||
T Consensus         5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivmEy   84 (271)
T d1nvra_           5 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY   84 (271)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             cceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEEec
Confidence            57888999999999999999999999999999996543 33456789999999999999999999999999999999999


Q ss_pred             cCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCC
Q 048419          409 VPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHG  488 (653)
Q Consensus       409 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~  488 (653)
                      |++|+|.+++...     ..+++.+++.++.||++||+|||+   ++|+||||||+|||+++++++||+|||+|+.....
T Consensus        85 ~~gg~L~~~l~~~-----~~l~e~~~~~i~~qi~~al~ylH~---~~IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~  156 (271)
T d1nvra_          85 CSGGELFDRIEPD-----IGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYN  156 (271)
T ss_dssp             CTTEEGGGGSBTT-----TBCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTCCEEECCCTTCEECEET
T ss_pred             cCCCcHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHH---cCCccCcccHHHEEECCCCCEEEccchhheeeccC
Confidence            9999999999653     358999999999999999999999   99999999999999999999999999999976443


Q ss_pred             CC-CcccccccCCcccCccccccCCC-CCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhh
Q 048419          489 AN-PQTTHIVGTLGYLAPELTRTGKA-TTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQ  566 (653)
Q Consensus       489 ~~-~~~~~~~gt~~y~aPE~~~~~~~-~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  566 (653)
                      .. ......+||+.|+|||++.+..+ +.++||||+||++|||++|+.||......... ...+...    ....     
T Consensus       157 ~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~-~~~~~~~----~~~~-----  226 (271)
T d1nvra_         157 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE-YSDWKEK----KTYL-----  226 (271)
T ss_dssp             TEECCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHH-HHHHHTT----CTTS-----
T ss_pred             CccccccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHH-HHHHhcC----CCCC-----
Confidence            22 22345689999999999988776 57899999999999999999999764432211 1111110    0000     


Q ss_pred             ccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcCCC
Q 048419          567 TLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLGDS  608 (653)
Q Consensus       567 ~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  608 (653)
                         .........+.+|+.+||+.||.+|||++|++++-.-..
T Consensus       227 ---~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~  265 (271)
T d1nvra_         227 ---NPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNK  265 (271)
T ss_dssp             ---TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTC
T ss_pred             ---CccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhCc
Confidence               000112356788999999999999999999987654433

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.7e-51  Score=411.03  Aligned_cols=253  Identities=25%  Similarity=0.388  Sum_probs=198.0

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEecc
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYV  409 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~  409 (653)
                      ++|+..+.||+|+||.||+|.+.+ +..||||++.... ...++|.+|++++++++|||||+++|+|.+.+..++|||||
T Consensus         5 ~~~~~~~~iG~G~fg~Vy~~~~~~-~~~vAvK~i~~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~~   82 (263)
T d1sm2a_           5 SELTFVQEIGSGQFGLVHLGYWLN-KDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM   82 (263)
T ss_dssp             SCEEEEEEEECCSSCCEEEEEETT-TEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred             HHcEEEEEEeeCCCeEEEEEEECC-CCEEEEEEECCCc-CcHHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEEec
Confidence            467888999999999999999864 6789999996543 34578999999999999999999999999999999999999


Q ss_pred             CCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCC
Q 048419          410 PNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGA  489 (653)
Q Consensus       410 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~  489 (653)
                      ++|+|.+++....    ..++|..++.++.|||+||.|||+   ++|+||||||+|||+++++++||+|||+++......
T Consensus        83 ~~g~L~~~l~~~~----~~~~~~~~~~i~~qia~gl~~lH~---~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~  155 (263)
T d1sm2a_          83 EHGCLSDYLRTQR----GLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ  155 (263)
T ss_dssp             TTCBHHHHHHTTT----TCCCHHHHHHHHHHHHHHHHHHHH---TTCCCTTCSGGGEEECGGGCEEECSCC---------
T ss_pred             CCCcHHHHhhccc----cCCCHHHHHHHHHHHHHHHHhhhc---cceeecccchhheeecCCCCeEecccchheeccCCC
Confidence            9999999987643    458999999999999999999999   999999999999999999999999999998775544


Q ss_pred             CCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCC-CChhhhhhHHHHHHHHHhhhcccchhHhhhhcc
Q 048419          490 NPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRS-IEPQKAAAELLLVDWVKELHLEGEITQAIDQTL  568 (653)
Q Consensus       490 ~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l  568 (653)
                      ........||+.|+|||++.+..++.++|||||||++|||+|++.| +.......   +.+.+.....            
T Consensus       156 ~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~---~~~~i~~~~~------------  220 (263)
T d1sm2a_         156 YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE---VVEDISTGFR------------  220 (263)
T ss_dssp             ---------CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHHH---HHHHHHHTCC------------
T ss_pred             ceeecceecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCCHHH---HHHHHHhcCC------------
Confidence            3344456789999999999999999999999999999999996544 44332211   1112211110            


Q ss_pred             CcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          569 DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       569 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                      ...+....+.+.+|+.+||+.||.+||||+||+++|+.
T Consensus       221 ~~~p~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~  258 (263)
T d1sm2a_         221 LYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAE  258 (263)
T ss_dssp             CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             CCCccccCHHHHHHHHHHccCCHhHCcCHHHHHHHHHH
Confidence            01111234678899999999999999999999999863

>d1fnya_ b.29.1.1 (A:) Legume lectin {Black locust (Robinia pseudoacacia) [TaxId: 35938]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Black locust (Robinia pseudoacacia) [TaxId: 35938]

Probab=100.00  E-value=7.2e-50  Score=396.35  Aligned_cols=223  Identities=26%  Similarity=0.417  Sum_probs=195.1

Q ss_pred             CceeEEeCCCCC--CCeEEecceEecCCCcEEecCCC-----CCceEEEEcCCCeecccCCCCceeeeEEEEEEEEecCC
Q 048419            7 DTTSFLYNGFLH--ANLSLEGAAYISTSGILTVTNKS-----EGLIGHALYPNPLRFKTSNKSVAIDFRTNFVFSILPKY   79 (653)
Q Consensus         7 ~~~~f~~~~f~~--~~l~~~g~a~~~~~g~l~Lt~~~-----~~~~Gr~~y~~pi~~~~~~~~~~~sF~t~F~f~i~~~~   79 (653)
                      .++||+|++|..  +|++|+|||.+.++|.|+||++.     ..++|||+|++||+||++.+++++||+|+|+|.|.+.+
T Consensus         2 ~~~sF~f~~F~~~~~~l~l~G~A~v~~~g~i~LT~~~~~~~~~~~~G~~~y~~Pi~l~~~~~~~~~sF~t~F~F~i~~~~   81 (237)
T d1fnya_           2 GSLSFSFPKFAPNQPYLINQGDALVTSTGVLQLTNVVNGVPSSKSLGRALYAAPFQIWDSTTGNVASFVTSFTFIIQAPN   81 (237)
T ss_dssp             EEEEEEESSCCTTCTTEEEEETCEECTTSCEECSCEETTEECSSCEEEEEESSCEECBCTTTCCBCEEEEEEEEECCCSS
T ss_pred             ceEEEEeCCCCCCCCCeEEcccEEEcCCCEEECCCCCCCCcccccEEEEEeCCCeEcccCCCCcceeeEEEEEEEEecCC
Confidence            468999999964  79999999999889999999863     46899999999999999999999999999999998887


Q ss_pred             CCCCCCceEEEEecCCCCCCCCCCccccCCCcccCCCCCCCCceEEEEeecccccccCCCCCCeeeEecCCCCcCCcccC
Q 048419           80 PDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTKFSTRMLAVEFDIIQNTELIDINDNHVGIDISSLISSASEPA  159 (653)
Q Consensus        80 ~~~~gdGlaF~l~~~~~~~~~~~g~~lG~~~~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~~~Hvgid~ns~~s~~~~~~  159 (653)
                      ...+||||||+|+|....+ +..|++||+++...   ....++.+||||||+.|.++ ||+++|||||+|++.|..+.+.
T Consensus        82 ~~~~gDG~AF~l~~~~~~~-~~~gg~lg~~~~~~---~~~~~~~~aVefDT~~n~~~-d~~~~Higi~~n~~~s~~~~~~  156 (237)
T d1fnya_          82 PATTADGLAFFLAPVDTQP-LDLGGMLGIFKDGY---FNKSNQIVAVEFDTFSNGDW-DPKGRHLGINVNSIESIKTVPW  156 (237)
T ss_dssp             TTSCCEEEEEEEEETTCCC-CCCGGGTTTCC------CCTTSCCEEEEEECSCCTTT-CCSSSEEEEEESSSSCSEEEEC
T ss_pred             CCCCCCeeEEEEcCCCCCc-ccccCcccccCCCC---ccCccceEEEEeccccccCC-CCCCceEEEecCCCcccccccc
Confidence            7889999999999977544 46678899987543   34567889999999999774 9999999999999988776543


Q ss_pred             ccccCCCCccccccCCCCceEEEEEecCCceEEEEEEeeCCCCCCCCCceeeeecCCcccccceEEeEecccC---cccc
Q 048419          160 SYYSGNNHRIPILLRSGDPIQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTG---LITA  236 (653)
Q Consensus       160 ~~~~~~~~~~~~~l~~g~~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~~l~~~~dL~~~l~~~~~vGFsastg---~~~~  236 (653)
                                  ++.+|+.++|||+|++.+++|.|++.+.+  ++..|+++..+||+.++|++|||||||+||   ...|
T Consensus       157 ------------~~~~g~~~~v~I~Y~~~~~~l~v~l~~~~--~~~~~~l~~~vdL~~~l~~~~yvGFSAsTG~~s~~~e  222 (237)
T d1fnya_         157 ------------NWTNGEVANVFISYEASTKSLTASLVYPS--LETSFIIDAIVDVKIVLPEWVRFGFSATTGIDKGYVQ  222 (237)
T ss_dssp             ------------CCCTTCCEEEEEEEEGGGTEEEEEEEETT--TTEEEEEEEECCHHHHSCSEEEEEEEEEECSSTTCCC
T ss_pred             ------------cccCCcEEEEEEEEeCCccEEEEEEEeCC--CCcceeEEEEechhhcCCCcEEEEEEEECCCCCCccc
Confidence                        46789999999999999999999998765  566789999999999999999999999999   4568


Q ss_pred             eeeecceeeeec
Q 048419          237 SHNVHGWSISIG  248 (653)
Q Consensus       237 ~~~i~sWsf~~~  248 (653)
                      .|+|+||+|++.
T Consensus       223 ~H~I~sWsF~s~  234 (237)
T d1fnya_         223 TNDVLSWSFESN  234 (237)
T ss_dssp             CCEEEEEEEEEE
T ss_pred             ccEEEEeEeEEe
Confidence            999999999975

>d1n47a_ b.29.1.1 (A:) Legume lectin {Hairy vetch (Vicia villosa), isolectin b4 [TaxId: 3911]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Hairy vetch (Vicia villosa), isolectin b4 [TaxId: 3911]

Probab=100.00  E-value=1.5e-49  Score=392.00  Aligned_cols=220  Identities=28%  Similarity=0.469  Sum_probs=191.8

Q ss_pred             CceeEEeCCCC--CCCeEEecceEecCCCcEEecCCC-----CCceEEEEcCCCeecccCCCCceeeeEEEEEEEEecCC
Q 048419            7 DTTSFLYNGFL--HANLSLEGAAYISTSGILTVTNKS-----EGLIGHALYPNPLRFKTSNKSVAIDFRTNFVFSILPKY   79 (653)
Q Consensus         7 ~~~~f~~~~f~--~~~l~~~g~a~~~~~g~l~Lt~~~-----~~~~Gr~~y~~pi~~~~~~~~~~~sF~t~F~f~i~~~~   79 (653)
                      +++||+|++|+  .+||+|+|||.+.++|.|+||++.     ..++|||||++||+||+..  .++||+|+|+|.|....
T Consensus         2 ~~~sF~f~~F~~~~~~l~l~G~A~i~~~g~i~LT~~~~~~~~~~~~G~~~y~~Pv~l~~~~--~~~sF~t~f~f~i~~~~   79 (233)
T d1n47a_           2 ESTSFSFTNFNPNQNNLILQEDALVNSAGTLELTAVAAGAPVPDSLGRALYAAPIHIHDNT--TLASFTTSFSFVMAAPA   79 (233)
T ss_dssp             EEEEEEESSCCTTCTTEEEEETCEECTTSCEESSCBSSSSBCTTCEEEEEESSCEECBCSS--CBCEEEEEEEEECCCSS
T ss_pred             CceEEEeCCCCCCCCCeEEecceEECCCCEEEecCCCCCCcCCCceEEEEeCCCEEccCCC--eeeeEEEEEEEEEeCCC
Confidence            57899999995  379999999999888999999865     3589999999999999864  57999999999998877


Q ss_pred             CCCCCCceEEEEecCCCCCCCCCCccccCCCcccCCCCCCCCceEEEEeecccccccCCCCCCeeeEecCCCCcCCcccC
Q 048419           80 PDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTKFSTRMLAVEFDIIQNTELIDINDNHVGIDISSLISSASEPA  159 (653)
Q Consensus        80 ~~~~gdGlaF~l~~~~~~~~~~~g~~lG~~~~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~~~Hvgid~ns~~s~~~~~~  159 (653)
                      ...+||||||+|+|....+ +..|++||+++....   +..++.|||||||++|.  +||++||||||+|++.+..+.+ 
T Consensus        80 ~~~~gDGlAF~l~~~~~~~-~~~gg~lGl~~~~~~---~~~~~~~aVefDT~~n~--~d~~~~higi~~n~~~s~~~~~-  152 (233)
T d1n47a_          80 AAAVADGLAFFLAPPDTQP-QARGGFLGLFADRAH---DASYQTVAVEFDTYSNA--WDPNYTHIGIDTNGIESKKTTP-  152 (233)
T ss_dssp             TTSCCEEEEEEEECTTCCC-CCCGGGTTTCSSSSC---CGGGCCEEEEEECSCCT--TSCSSCEEEEEESSSSCSEEEE-
T ss_pred             CCCCCCceEEEECCCCCCC-CCCCCccccccccCC---CCcCceEEEEEEeeecC--CCCCCCceeEccCCcccccccc-
Confidence            7789999999999977544 457789999876443   45577899999999997  7999999999999998876654 


Q ss_pred             ccccCCCCccccccCCCCceEEEEEecCCceEEEEEEeeCCCCCCCCCceeeeecCCcccccceEEeEecccCc---ccc
Q 048419          160 SYYSGNNHRIPILLRSGDPIQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGL---ITA  236 (653)
Q Consensus       160 ~~~~~~~~~~~~~l~~g~~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~~l~~~~dL~~~l~~~~~vGFsastg~---~~~  236 (653)
                                 +.+.+|+.++|||+|++.+++|.|++....  ++..|.++..+||+.+||++|||||||+||.   ..|
T Consensus       153 -----------~~l~~g~~~~v~I~Y~~~~~~l~v~l~~~~--~~~~~~ls~~vdL~~~l~~~vyvGFSAsTG~~~~~~~  219 (233)
T d1n47a_         153 -----------FDMVYGEKANIVITYQASTKALAASLVFPV--SQTSYAVSARVDLRDILPEYVRVGFSATTGLNAGVVE  219 (233)
T ss_dssp             -----------CCCCTTSCEEEEEEEETTTTEEEEEEEETT--TTEEEEEEEECCGGGTSCSEEEEEEEEEECSSTTCCC
T ss_pred             -----------ceecCCCEEEEEEEEcCCCeEEEEEEEeCC--CCccEEEEEEechHHhcCCcEEEEEEEecCCCCCccc
Confidence                       357899999999999999999999998654  5777899999999999999999999999994   568


Q ss_pred             eeeecceeeeec
Q 048419          237 SHNVHGWSISIG  248 (653)
Q Consensus       237 ~~~i~sWsf~~~  248 (653)
                      .|+|++|+|++.
T Consensus       220 ~H~I~sWsFss~  231 (233)
T d1n47a_         220 THDIVSWSFAVS  231 (233)
T ss_dssp             CCEEEEEEEEEE
T ss_pred             ccEEEEEEeEEE
Confidence            999999999863

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=2.4e-51  Score=419.74  Aligned_cols=257  Identities=23%  Similarity=0.364  Sum_probs=214.8

Q ss_pred             hcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEec
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDY  408 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~  408 (653)
                      .++|+..+.||+|+||+||+|.+..+++.||||+++... ...++|.+|+++|++++|||||+++++|.+.+.+++||||
T Consensus        16 ~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~-~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv~E~   94 (287)
T d1opja_          16 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF   94 (287)
T ss_dssp             GGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTC-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred             HHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCcc-chHHHHHHHHHHHHhCCCCCEecCCccEeeCCeeEEEeec
Confidence            356888899999999999999999889999999986543 3467899999999999999999999999999999999999


Q ss_pred             cCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCC
Q 048419          409 VPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHG  488 (653)
Q Consensus       409 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~  488 (653)
                      |++|+|.+++....   ...+++..++.++.||++||+|||+   ++|+||||||+||||++++++||+|||+++.....
T Consensus        95 ~~~g~l~~~l~~~~---~~~~~~~~~~~i~~qi~~gL~yLH~---~~iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~~~  168 (287)
T d1opja_          95 MTYGNLLDYLRECN---RQEVSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD  168 (287)
T ss_dssp             CTTCBHHHHHHHSC---TTTSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCCCTTTCCSS
T ss_pred             ccCcchHHHhhhcc---ccchHHHHHHHHHHHHHHHHHHHHH---CCcccCccccCeEEECCCCcEEEccccceeecCCC
Confidence            99999999997654   3568999999999999999999999   89999999999999999999999999999977654


Q ss_pred             CCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhcc
Q 048419          489 ANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTL  568 (653)
Q Consensus       489 ~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l  568 (653)
                      .........|++.|+|||++.+..++.++|||||||++|||++|+.|+........  +.+.+.....            
T Consensus       169 ~~~~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~--~~~~i~~~~~------------  234 (287)
T d1opja_         169 TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ--VYELLEKDYR------------  234 (287)
T ss_dssp             SSEEETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH--HHHHHHTTCC------------
T ss_pred             CceeeccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcchHHH--HHHHHhcCCC------------
Confidence            44444455689999999999999999999999999999999998777654332211  1112211110            


Q ss_pred             CcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          569 DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       569 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                      ...+....+.+.+|+.+||+.||.+|||+.||++.|+.
T Consensus       235 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ei~~~L~~  272 (287)
T d1opja_         235 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFET  272 (287)
T ss_dssp             CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             CCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence            11112234678999999999999999999999998864

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.7e-50  Score=409.87  Aligned_cols=252  Identities=24%  Similarity=0.336  Sum_probs=212.3

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEecc
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYV  409 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~  409 (653)
                      ++|+..+.||+|+||+||+|.+..+|+.||||++........+.+.+|+.++++++|||||++++++.+.+.+++|||||
T Consensus        20 ~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~   99 (293)
T d1yhwa1          20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL   99 (293)
T ss_dssp             TTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             cccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEEEec
Confidence            47999999999999999999999999999999997665556778999999999999999999999999999999999999


Q ss_pred             CCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCC
Q 048419          410 PNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGA  489 (653)
Q Consensus       410 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~  489 (653)
                      ++|+|.+++...      .+++.++..++.||+.||+|||+   ++|+||||||+|||++.++++||+|||+++......
T Consensus       100 ~gg~L~~~~~~~------~l~~~~~~~i~~qi~~aL~yLH~---~~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~  170 (293)
T d1yhwa1         100 AGGSLTDVVTET------CMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ  170 (293)
T ss_dssp             TTCBHHHHHHHS------CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred             CCCcHHHHhhcc------CCCHHHHHHHHHHHHHHHHHHHH---CCCcccCCcHHHeEECCCCcEeeccchhheeecccc
Confidence            999999987543      48999999999999999999999   999999999999999999999999999999765433


Q ss_pred             CCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhccC
Q 048419          490 NPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLD  569 (653)
Q Consensus       490 ~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~  569 (653)
                       .......||+.|+|||++.+..++.++|||||||++|||++|+.||.........  ..........          + 
T Consensus       171 -~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~--~~~~~~~~~~----------~-  236 (293)
T d1yhwa1         171 -SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRAL--YLIATNGTPE----------L-  236 (293)
T ss_dssp             -CCBCCCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH--HHHHHHCSCC----------C-
T ss_pred             -ccccccccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHHHHH--HHHHhCCCCC----------C-
Confidence             2334567999999999999999999999999999999999999999765433211  1111111000          0 


Q ss_pred             cCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          570 YYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       570 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                      ..+......+.+|+.+||+.||.+|||+.|++++-
T Consensus       237 ~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~Hp  271 (293)
T d1yhwa1         237 QNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQ  271 (293)
T ss_dssp             SSGGGSCHHHHHHHHHHTCSSTTTSCCHHHHTTCG
T ss_pred             CCcccCCHHHHHHHHHHccCChhHCcCHHHHhcCH
Confidence            00112246688999999999999999999999754

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-50  Score=410.35  Aligned_cols=256  Identities=25%  Similarity=0.382  Sum_probs=203.5

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC--chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEe
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYD  407 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E  407 (653)
                      ++|...+.||+|+||+||+|+++   ..||||+++..  ..+..+.|.+|+.++++++|||||++++++.+ +.+++|||
T Consensus         8 ~~~~~~~~lG~G~fg~Vy~~~~~---~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~~-~~~~lv~E   83 (276)
T d1uwha_           8 GQITVGQRIGSGSFGTVYKGKWH---GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA-PQLAIVTQ   83 (276)
T ss_dssp             TCCCCCSEEEECSSCEEEEEESS---SEEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred             ccEEEEEEEeeCCCcEEEEEEEC---CEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEec-cEEEEEEe
Confidence            56778899999999999999875   35999998644  45567889999999999999999999999865 46899999


Q ss_pred             ccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccC
Q 048419          408 YVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEH  487 (653)
Q Consensus       408 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~  487 (653)
                      ||++|+|.+++....    ..+++.+++.++.||++||+|||+   ++|+||||||+||||+.++++||+|||+++....
T Consensus        84 y~~~g~L~~~l~~~~----~~~~~~~~~~i~~qi~~gl~yLH~---~~ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~  156 (276)
T d1uwha_          84 WCEGSSLYHHLHIIE----TKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSR  156 (276)
T ss_dssp             CCCEEEHHHHHHTSC----CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEETTSSEEECCCCCSCC---
T ss_pred             cCCCCCHHHHHhhcc----CCCCHHHHHHHHHHHHHHHHHHhc---CCEeccccCHHHEEEcCCCCEEEccccceeeccc
Confidence            999999999997643    358999999999999999999999   8999999999999999999999999999987654


Q ss_pred             CCC-CcccccccCCcccCcccccc---CCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHh
Q 048419          488 GAN-PQTTHIVGTLGYLAPELTRT---GKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQA  563 (653)
Q Consensus       488 ~~~-~~~~~~~gt~~y~aPE~~~~---~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~  563 (653)
                      ... .......||+.|+|||++.+   ..++.++|||||||++|||+||+.||........  +...+........    
T Consensus       157 ~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~--~~~~~~~~~~~p~----  230 (276)
T d1uwha_         157 WSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ--IIFMVGRGYLSPD----  230 (276)
T ss_dssp             ---------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHH--HHHHHHHTSCCCC----
T ss_pred             cCCcccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHH--HHHHHhcCCCCCc----
Confidence            322 23345679999999999864   3478999999999999999999999986543322  1112222111111    


Q ss_pred             hhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          564 IDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       564 ~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                          +.......++.+.+|+.+||+.||.+|||++||+++|+.
T Consensus       231 ----~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~il~~Le~  269 (276)
T d1uwha_         231 ----LSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIEL  269 (276)
T ss_dssp             ----GGGSCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             ----chhccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence                111222334678999999999999999999999999874

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-50  Score=409.67  Aligned_cols=253  Identities=26%  Similarity=0.392  Sum_probs=207.0

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEecc
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYV  409 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~  409 (653)
                      ++|+..+.||+|+||.||+|.++ ++..||||++.... ...+.|.+|++++++++|||||+++|+|.+ +.+++|||||
T Consensus        13 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~-~~~~iv~Ey~   89 (272)
T d1qpca_          13 ETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYM   89 (272)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEECC
T ss_pred             HHeEEeEEEecCCCcEEEEEEEC-CCCEEEEEEEccCc-CCHHHHHHHHHHHHhCCCCCEeEEEeeecc-CCeEEEEEeC
Confidence            46778899999999999999986 47889999996543 345789999999999999999999998865 5679999999


Q ss_pred             CCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCC
Q 048419          410 PNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGA  489 (653)
Q Consensus       410 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~  489 (653)
                      ++|+|.+++....   ...++|.++++|+.||++||+|||+   ++|+||||||+||||++++.+||+|||+++......
T Consensus        90 ~~g~L~~~~~~~~---~~~l~~~~~~~i~~qi~~gl~~lH~---~~ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~~  163 (272)
T d1qpca_          90 ENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE  163 (272)
T ss_dssp             TTCBHHHHTTSHH---HHTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSC
T ss_pred             CCCcHHHHHhhcC---CCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCccchhheeeecccceeeccccceEEccCCc
Confidence            9999999886654   3458999999999999999999999   999999999999999999999999999999876544


Q ss_pred             CCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhccC
Q 048419          490 NPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLD  569 (653)
Q Consensus       490 ~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~  569 (653)
                      ........||+.|+|||++.++.++.++|||||||++|||+||+.|+.......+  +...+....         .   .
T Consensus       164 ~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~--~~~~i~~~~---------~---~  229 (272)
T d1qpca_         164 YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE--VIQNLERGY---------R---M  229 (272)
T ss_dssp             EECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH--HHHHHHTTC---------C---C
T ss_pred             cccccccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCHHH--HHHHHHhcC---------C---C
Confidence            3444456789999999999999999999999999999999997666544332211  111111110         0   0


Q ss_pred             cCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          570 YYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       570 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                      ..+....+.+.+|+.+||+.||++||||.||++.|+
T Consensus       230 ~~p~~~~~~l~~li~~cl~~~P~~Rpt~~ei~~~L~  265 (272)
T d1qpca_         230 VRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE  265 (272)
T ss_dssp             CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             CCcccChHHHHHHHHHHcCCCHhHCcCHHHHHHHhh
Confidence            111123456889999999999999999999999886

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.3e-51  Score=411.56  Aligned_cols=257  Identities=23%  Similarity=0.368  Sum_probs=198.8

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC--chhhHHHHHHHHHHHhhcCCCceeeeeeeecc--cceeEEE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRK--QDELLLV  405 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~--~~~~~lV  405 (653)
                      ++|+..+.||+|+||.||+|++..+|+.||||++...  .....+.+.+|++++++++|||||++++++.+  .+.+++|
T Consensus         4 edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~iv   83 (269)
T d2java1           4 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIV   83 (269)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEEE
T ss_pred             hhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEEE
Confidence            5688999999999999999999999999999999654  34456778999999999999999999999865  4568999


Q ss_pred             EeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcC--CCCeEecCCCCCcEEEcCCCcEEEEeecCcc
Q 048419          406 YDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEEC--NQRVVHRDVKPSNILLDTYLNAKLGDFGLAK  483 (653)
Q Consensus       406 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~--~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~  483 (653)
                      ||||++|+|.+++...... ...+++..++.++.||+.||+|||+..  ..+|+||||||+||||+.++.+||+|||+++
T Consensus        84 mEy~~~g~L~~~i~~~~~~-~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a~  162 (269)
T d2java1          84 MEYCEGGDLASVITKGTKE-RQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR  162 (269)
T ss_dssp             EECCTTEEHHHHHHHHHHH-TCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHHHHH
T ss_pred             EecCCCCcHHHHHHhcccc-CCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeecccee
Confidence            9999999999999764321 456999999999999999999999832  1349999999999999999999999999999


Q ss_pred             cccCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHh
Q 048419          484 IYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQA  563 (653)
Q Consensus       484 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~  563 (653)
                      ...... .......||+.|+|||++.+..++.++|||||||++|||+||+.||......+   +...+..    +..   
T Consensus       163 ~~~~~~-~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~~---~~~~i~~----~~~---  231 (269)
T d2java1         163 ILNHDT-SFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKE---LAGKIRE----GKF---  231 (269)
T ss_dssp             HC------------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH---HHHHHHH----TCC---
T ss_pred             ecccCC-CccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCCHHH---HHHHHHc----CCC---
Confidence            765432 22344689999999999999999999999999999999999999998654322   1111111    111   


Q ss_pred             hhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 048419          564 IDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEF  603 (653)
Q Consensus       564 ~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  603 (653)
                           ...+....+.+.+|+.+||+.||.+|||+.|++++
T Consensus       232 -----~~~~~~~s~~l~~li~~~L~~dp~~Rps~~ell~h  266 (269)
T d2java1         232 -----RRIPYRYSDELNEIITRMLNLKDYHRPSVEEILEN  266 (269)
T ss_dssp             -----CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             -----CCCCcccCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence                 11111234578899999999999999999999874

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.7e-50  Score=406.16  Aligned_cols=247  Identities=26%  Similarity=0.397  Sum_probs=209.0

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC---chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN---SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVY  406 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  406 (653)
                      ++|+..+.||+|+||.||+|++..+++.||||++...   .....+.+.+|++++++++|||||++++++.+.+..++||
T Consensus         6 ~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ivm   85 (263)
T d2j4za1           6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLIL   85 (263)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEEEEE
Confidence            4688899999999999999999999999999998643   2334567899999999999999999999999999999999


Q ss_pred             eccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccccc
Q 048419          407 DYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE  486 (653)
Q Consensus       407 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~  486 (653)
                      |||++|+|.+++...     ..+++.++..++.||++||+|||+   ++|+||||||+|||++.++++||+|||+++...
T Consensus        86 Ey~~~g~L~~~l~~~-----~~l~e~~~~~i~~qi~~al~~lH~---~~ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~  157 (263)
T d2j4za1          86 EYAPLGTVYRELQKL-----SKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP  157 (263)
T ss_dssp             ECCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCCSCSCCC
T ss_pred             eecCCCcHHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeeeeccccceecCCCCEeecccceeeecC
Confidence            999999999999754     348999999999999999999999   999999999999999999999999999998654


Q ss_pred             CCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhh
Q 048419          487 HGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQ  566 (653)
Q Consensus       487 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  566 (653)
                      ..   ......||+.|+|||++.+..++.++|||||||++|||++|+.||........   ...+...  ...       
T Consensus       158 ~~---~~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~---~~~i~~~--~~~-------  222 (263)
T d2j4za1         158 SS---RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET---YKRISRV--EFT-------  222 (263)
T ss_dssp             CC---CCEETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH---HHHHHTT--CCC-------
T ss_pred             CC---cccccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCHHHH---HHHHHcC--CCC-------
Confidence            32   23446799999999999999999999999999999999999999976543221   1111110  000       


Q ss_pred             ccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 048419          567 TLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEF  603 (653)
Q Consensus       567 ~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  603 (653)
                          .+....+.+.+|+.+||+.||.+|||++|++++
T Consensus       223 ----~p~~~s~~~~~li~~~L~~dp~~R~t~~eil~h  255 (263)
T d2j4za1         223 ----FPDFVTEGARDLISRLLKHNPSQRPMLREVLEH  255 (263)
T ss_dssp             ----CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred             ----CCccCCHHHHHHHHHHccCCHhHCcCHHHHHcC
Confidence                111224568899999999999999999999974

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5e-50  Score=409.71  Aligned_cols=253  Identities=23%  Similarity=0.331  Sum_probs=210.0

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEecc
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYV  409 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~  409 (653)
                      +.|+..+.||+|+||.||+|.+..+++.||||++........+.+.+|+++|++++|||||++++++.+.+.+++|||||
T Consensus        12 d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmEy~   91 (288)
T d2jfla1          12 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFC   91 (288)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             cCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEecC
Confidence            45888999999999999999999999999999998777677788999999999999999999999999999999999999


Q ss_pred             CCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCC
Q 048419          410 PNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGA  489 (653)
Q Consensus       410 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~  489 (653)
                      ++|+|.+++.+..    ..+++.++..++.||++||.|||+   ++|+||||||+|||++.++++||+|||+++......
T Consensus        92 ~~g~L~~~~~~~~----~~l~e~~~~~i~~qi~~gL~ylH~---~~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~~  164 (288)
T d2jfla1          92 AGGAVDAVMLELE----RPLTESQIQVVCKQTLDALNYLHD---NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI  164 (288)
T ss_dssp             TTEEHHHHHHHHT----SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECHHHH
T ss_pred             CCCcHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHH---CCEEEeecChhheeECCCCCEEEEechhhhccCCCc
Confidence            9999999986542    458999999999999999999999   999999999999999999999999999997643211


Q ss_pred             CCcccccccCCcccCccccc-----cCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhh
Q 048419          490 NPQTTHIVGTLGYLAPELTR-----TGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAI  564 (653)
Q Consensus       490 ~~~~~~~~gt~~y~aPE~~~-----~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  564 (653)
                       .......||+.|+|||++.     ...++.++|||||||++|||+||+.||........  +......     ..    
T Consensus       165 -~~~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~~--~~~i~~~-----~~----  232 (288)
T d2jfla1         165 -QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRV--LLKIAKS-----EP----  232 (288)
T ss_dssp             -HHHTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGGH--HHHHHHS-----CC----
T ss_pred             -ccccccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHHH--HHHHHcC-----CC----
Confidence             1223457999999999984     45688999999999999999999999976544321  1111111     00    


Q ss_pred             hhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 048419          565 DQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEF  603 (653)
Q Consensus       565 d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  603 (653)
                       +.+ ..+......+.+|+.+||+.||.+|||+.|++++
T Consensus       233 -~~~-~~~~~~s~~~~~li~~~L~~dp~~R~t~~ell~h  269 (288)
T d2jfla1         233 -PTL-AQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQH  269 (288)
T ss_dssp             -CCC-SSGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred             -CCC-CccccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence             001 0111234678899999999999999999999875

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.8e-49  Score=397.83  Aligned_cols=252  Identities=25%  Similarity=0.395  Sum_probs=212.7

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEecc
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYV  409 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~  409 (653)
                      ++|+..+.||+|+||+||+|+++ ++..||||+++.... ..++|.+|+.++++++||||++++|+|.+.+.+++||||+
T Consensus         4 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~-~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey~   81 (258)
T d1k2pa_           4 KDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM   81 (258)
T ss_dssp             CCCCCCCCCCEETTEEEEEEEET-TTEEEEEEEEESSSS-CHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEECC
T ss_pred             HHCEEeEEEecCCCeEEEEEEEC-CCCEEEEEEECcCcC-CHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEcc
Confidence            57888999999999999999986 578999999976543 4578999999999999999999999999999999999999


Q ss_pred             CCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCC
Q 048419          410 PNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGA  489 (653)
Q Consensus       410 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~  489 (653)
                      ++|+|..++....    ..+++..+++++.||++||.|||+   ++|+||||||+|||+++++.+||+|||+++......
T Consensus        82 ~~g~l~~~~~~~~----~~~~~~~~~~i~~qi~~gl~~LH~---~~iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~  154 (258)
T d1k2pa_          82 ANGCLLNYLREMR----HRFQTQQLLEMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE  154 (258)
T ss_dssp             TTEEHHHHHHSGG----GCCCHHHHHHHHHHHHHHHHHHHH---TTBCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSS
T ss_pred             CCCcHHHhhhccc----cCCcHHHHHHHHHHHHHHHHHHhh---cCcccccccceeEEEcCCCcEEECcchhheeccCCC
Confidence            9999999976653    458899999999999999999999   899999999999999999999999999998765544


Q ss_pred             CCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhcc
Q 048419          490 NPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTL  568 (653)
Q Consensus       490 ~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l  568 (653)
                      ........||+.|+|||.+.+..++.++|||||||++|||+| |+.||......+   +...+..    +.       ++
T Consensus       155 ~~~~~~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~---~~~~i~~----~~-------~~  220 (258)
T d1k2pa_         155 YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE---TAEHIAQ----GL-------RL  220 (258)
T ss_dssp             CCCCCCSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHH---HHHHHHT----TC-------CC
T ss_pred             ceeecccCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHHH---HHHHHHh----CC-------CC
Confidence            444445678999999999999999999999999999999998 899998665432   1111111    10       00


Q ss_pred             CcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          569 DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       569 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                       ..+....+.+.+|+.+||+.||++|||+.||+++|.
T Consensus       221 -~~p~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~  256 (258)
T d1k2pa_         221 -YRPHLASEKVYTIMYSCWHEKADERPTFKILLSNIL  256 (258)
T ss_dssp             -CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred             -CCcccccHHHHHHHHHHccCCHhHCcCHHHHHHHhh
Confidence             111123467899999999999999999999999984

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.8e-49  Score=403.95  Aligned_cols=257  Identities=28%  Similarity=0.436  Sum_probs=201.6

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCC----cEEEEEEeccC-chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLG----LEVAIKRIGHN-SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLL  404 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~----~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  404 (653)
                      +.|+..++||+|+||.||+|.++.++    ..||||++... .....++|.+|+.++++++|||||+++|+|.+.+..++
T Consensus         7 ~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~~~   86 (283)
T d1mqba_           7 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI   86 (283)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCceEE
Confidence            45778999999999999999986544    47999999654 34445679999999999999999999999999999999


Q ss_pred             EEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccc
Q 048419          405 VYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKI  484 (653)
Q Consensus       405 V~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~  484 (653)
                      |||||.+++|.+++....    ..++|.++++++.||+.||+|||+   ++|+||||||+||||+.++.+||+|||+++.
T Consensus        87 v~e~~~~~~l~~~~~~~~----~~~~~~~~~~i~~~i~~gl~~lH~---~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~  159 (283)
T d1mqba_          87 ITEYMENGALDKFLREKD----GEFSVLQLVGMLRGIAAGMKYLAN---MNYVHRDLAARNILVNSNLVCKVSDFGLSRV  159 (283)
T ss_dssp             EEECCTTEEHHHHHHHTT----TCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCCCC---
T ss_pred             EEEecccCcchhhhhccc----ccccHHHHHHHHHHHHHhhhhccc---cccccCccccceEEECCCCeEEEcccchhhc
Confidence            999999999998876543    458999999999999999999999   9999999999999999999999999999987


Q ss_pred             ccCCCC--CcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhH
Q 048419          485 YEHGAN--PQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQ  562 (653)
Q Consensus       485 ~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~  562 (653)
                      ......  .......||+.|+|||++.+..++.++|||||||++|||++|+.|+.......+  +.+.+....       
T Consensus       160 ~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~~--~~~~i~~~~-------  230 (283)
T d1mqba_         160 LEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHE--VMKAINDGF-------  230 (283)
T ss_dssp             --------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH--HHHHHHTTC-------
T ss_pred             ccCCCccceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCCHHH--HHHHHhccC-------
Confidence            654322  122335689999999999999999999999999999999997666554332211  111211111       


Q ss_pred             hhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcCC
Q 048419          563 AIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLGD  607 (653)
Q Consensus       563 ~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  607 (653)
                           ....+...+..+.+|+.+||+.||++||||.||+++|+..
T Consensus       231 -----~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~eil~~L~~l  270 (283)
T d1mqba_         231 -----RLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKL  270 (283)
T ss_dssp             -----CCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred             -----CCCCchhhHHHHHHHHHHHCcCCHhHCcCHHHHHHHHHHH
Confidence                 0111223446789999999999999999999999999753

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.7e-49  Score=402.58  Aligned_cols=253  Identities=26%  Similarity=0.395  Sum_probs=205.5

Q ss_pred             cCcCccee-eeeeCcEEEEEEEeCC--CCcEEEEEEeccC-chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEE
Q 048419          330 KGFGEQNL-VGSGGFGRVYRGLMPS--LGLEVAIKRIGHN-SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLV  405 (653)
Q Consensus       330 ~~f~~~~~-LG~G~fg~Vy~~~~~~--~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV  405 (653)
                      ++|...+. ||+|+||.||+|.++.  ++..||||+++.. .....+.|.+|+++|++++|||||+++|+|.+ +.++||
T Consensus         8 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-~~~~lv   86 (285)
T d1u59a_           8 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLV   86 (285)
T ss_dssp             GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEE
T ss_pred             cCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeecc-CeEEEE
Confidence            34555664 9999999999998753  3558999999754 44557889999999999999999999999965 468999


Q ss_pred             EeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccc
Q 048419          406 YDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIY  485 (653)
Q Consensus       406 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~  485 (653)
                      ||||++|+|.+++...    +..+++.++++++.||++||+|||+   ++|+||||||+||||+.++.+||+|||+++..
T Consensus        87 mE~~~~g~L~~~l~~~----~~~l~~~~~~~i~~qi~~gL~ylH~---~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~  159 (285)
T d1u59a_          87 MEMAGGGPLHKFLVGK----REEIPVSNVAELLHQVSMGMKYLEE---KNFVHRDLAARNVLLVNRHYAKISDFGLSKAL  159 (285)
T ss_dssp             EECCTTEEHHHHHTTC----TTTSCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred             EEeCCCCcHHHHhhcc----ccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCcCchhheeeccCCceeeccchhhhcc
Confidence            9999999999998654    2458999999999999999999999   99999999999999999999999999999977


Q ss_pred             cCCCCC--cccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhhcccchhH
Q 048419          486 EHGANP--QTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELHLEGEITQ  562 (653)
Q Consensus       486 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~  562 (653)
                      ......  ......||+.|+|||++.+..++.++|||||||++|||+| |+.||......+   +...+..    +... 
T Consensus       160 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~---~~~~i~~----~~~~-  231 (285)
T d1u59a_         160 GADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE---VMAFIEQ----GKRM-  231 (285)
T ss_dssp             TTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHH---HHHHHHT----TCCC-
T ss_pred             cccccccccccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCHHH---HHHHHHc----CCCC-
Confidence            543221  2233468899999999999999999999999999999998 899998654322   1122211    1111 


Q ss_pred             hhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          563 AIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       563 ~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                             ..+...+..+.+|+.+||+.||++|||+.+|++.|+
T Consensus       232 -------~~p~~~~~~l~~li~~cl~~~p~~RPs~~~i~~~L~  267 (285)
T d1u59a_         232 -------ECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMR  267 (285)
T ss_dssp             -------CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred             -------CCCCcCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHH
Confidence                   111223467889999999999999999999999885

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.1e-49  Score=400.29  Aligned_cols=246  Identities=27%  Similarity=0.387  Sum_probs=199.0

Q ss_pred             eeeeeeCcEEEEEEEeCC--CCcEEEEEEeccC--chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEeccCC
Q 048419          336 NLVGSGGFGRVYRGLMPS--LGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPN  411 (653)
Q Consensus       336 ~~LG~G~fg~Vy~~~~~~--~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~  411 (653)
                      ++||+|+||+||+|.+..  .++.||||+++..  +....+.|.+|+++|++++|||||+++|+|.. +..+||||||++
T Consensus        13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~-~~~~lvmE~~~~   91 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL   91 (277)
T ss_dssp             EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred             CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEecc-CCEEEEEEcCCC
Confidence            579999999999998643  4578999999643  33446789999999999999999999999965 457899999999


Q ss_pred             CCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCCCC
Q 048419          412 GSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGANP  491 (653)
Q Consensus       412 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~  491 (653)
                      |+|.+++...     ..++|.++++++.||++||+|||+   ++|+||||||+||||+.++.+||+|||+++........
T Consensus        92 g~L~~~l~~~-----~~l~~~~~~~i~~qi~~gl~ylH~---~~iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~  163 (277)
T d1xbba_          92 GPLNKYLQQN-----RHVKDKNIIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY  163 (277)
T ss_dssp             EEHHHHHHHC-----TTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSE
T ss_pred             CcHHHHHhhc-----cCCCHHHHHHHHHHHHHHHhhHHh---CCcccCCCcchhhcccccCcccccchhhhhhccccccc
Confidence            9999998764     348999999999999999999999   89999999999999999999999999999876543322


Q ss_pred             --cccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhcc
Q 048419          492 --QTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTL  568 (653)
Q Consensus       492 --~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l  568 (653)
                        ......||+.|+|||.+.+..++.++|||||||++|||+| |+.||......+   +...+..    +..       +
T Consensus       164 ~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~---~~~~i~~----~~~-------~  229 (277)
T d1xbba_         164 YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE---VTAMLEK----GER-------M  229 (277)
T ss_dssp             EEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH---HHHHHHT----TCC-------C
T ss_pred             cccccccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCHHH---HHHHHHc----CCC-------C
Confidence              2233568999999999999999999999999999999998 899998654322   1122211    110       1


Q ss_pred             CcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          569 DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       569 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                       ..+...+..+.+|+.+||+.||.+|||+++|+++|+
T Consensus       230 -~~p~~~~~~~~~li~~cl~~dp~~RPs~~~i~~~L~  265 (277)
T d1xbba_         230 -GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLR  265 (277)
T ss_dssp             -CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHH
T ss_pred             -CCCcccCHHHHHHHHHHcCCCHhHCcCHHHHHHHhh
Confidence             111223467889999999999999999999998875

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.9e-48  Score=394.23  Aligned_cols=246  Identities=25%  Similarity=0.379  Sum_probs=199.8

Q ss_pred             CcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC--chhhHHHHHHHHHHHhhcCCCceeeeeeeecc----cceeEEEE
Q 048419          333 GEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRK----QDELLLVY  406 (653)
Q Consensus       333 ~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~----~~~~~lV~  406 (653)
                      +..+.||+|+||+||+|.+..+++.||+|++...  .....+.+.+|+++|++++|||||++++++.+    ...+++||
T Consensus        12 ~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~ivm   91 (270)
T d1t4ha_          12 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT   91 (270)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEE
T ss_pred             EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEEE
Confidence            4567899999999999999999999999998653  44556789999999999999999999999865    34689999


Q ss_pred             eccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCC--eEecCCCCCcEEEc-CCCcEEEEeecCcc
Q 048419          407 DYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQR--VVHRDVKPSNILLD-TYLNAKLGDFGLAK  483 (653)
Q Consensus       407 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~--ivH~Dlkp~NIll~-~~~~~kl~DfGla~  483 (653)
                      |||++|+|.+++...     ..+++.+++.++.||++||+|||+   ++  |+||||||+||||+ +++.+||+|||+++
T Consensus        92 E~~~~g~L~~~l~~~-----~~~~~~~~~~~~~qi~~gl~yLH~---~~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~  163 (270)
T d1t4ha_          92 ELMTSGTLKTYLKRF-----KVMKIKVLRSWCRQILKGLQFLHT---RTPPIIHRDLKCDNIFITGPTGSVKIGDLGLAT  163 (270)
T ss_dssp             ECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHT---SSSCCCCSCCCGGGEEESSTTSCEEECCTTGGG
T ss_pred             eCCCCCcHHHHHhcc-----ccccHHHHHHHHHHHHHHHHHHHH---CCCCEEeCCcChhhceeeCCCCCEEEeecCcce
Confidence            999999999999754     348999999999999999999999   66  99999999999996 57899999999998


Q ss_pred             cccCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHh
Q 048419          484 IYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQA  563 (653)
Q Consensus       484 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~  563 (653)
                      ....   .......||+.|+|||++.+ +++.++|||||||++|||++|+.||........  +...+.    .+.....
T Consensus       164 ~~~~---~~~~~~~GT~~Y~aPE~~~~-~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~--~~~~i~----~~~~~~~  233 (270)
T d1t4ha_         164 LKRA---SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQ--IYRRVT----SGVKPAS  233 (270)
T ss_dssp             GCCT---TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHH--HHHHHT----TTCCCGG
T ss_pred             eccC---CccCCcccCccccCHHHhCC-CCCCcCchhhHHHHHHHHHHCCCCCCCcccHHH--HHHHHH----cCCCCcc
Confidence            6433   22345689999999999865 699999999999999999999999975433221  111111    1111111


Q ss_pred             hhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 048419          564 IDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEF  603 (653)
Q Consensus       564 ~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  603 (653)
                      +++       ...+.+.+|+.+||+.||++|||+.|++++
T Consensus       234 ~~~-------~~~~~~~~li~~~l~~dp~~R~s~~ell~H  266 (270)
T d1t4ha_         234 FDK-------VAIPEVKEIIEGCIRQNKDERYSIKDLLNH  266 (270)
T ss_dssp             GGG-------CCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             cCc-------cCCHHHHHHHHHHccCCHhHCcCHHHHhCC
Confidence            111       123468899999999999999999999875

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.9e-49  Score=411.22  Aligned_cols=265  Identities=25%  Similarity=0.340  Sum_probs=208.8

Q ss_pred             hcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC-chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEe
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN-SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYD  407 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E  407 (653)
                      .++|+..+.||+|+||+||+|++..+|+.||+|+++.. .....+.+.+|+.+|++++|||||+++++|.+.+.+++|||
T Consensus         5 ~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iVmE   84 (322)
T d1s9ja_           5 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME   84 (322)
T ss_dssp             GGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             ccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEE
Confidence            57899999999999999999999999999999999754 34445788999999999999999999999999999999999


Q ss_pred             ccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccC
Q 048419          408 YVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEH  487 (653)
Q Consensus       408 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~  487 (653)
                      ||++|+|.+++.+.     ..+++..+..++.|++.||.|||+.  ++|+||||||+||||+.++++||+|||+|+....
T Consensus        85 y~~gg~L~~~l~~~-----~~l~~~~~~~~~~qil~aL~yLH~~--~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~  157 (322)
T d1s9ja_          85 HMDGGSLDQVLKKA-----GRIPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID  157 (322)
T ss_dssp             CCTTEEHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHH--HCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHH
T ss_pred             cCCCCcHHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHHHh--CCEEccccCHHHeeECCCCCEEEeeCCCccccCC
Confidence            99999999999754     3489999999999999999999971  3899999999999999999999999999987643


Q ss_pred             CCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHH-HHHHHh-------------
Q 048419          488 GANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLL-VDWVKE-------------  553 (653)
Q Consensus       488 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l-~~~~~~-------------  553 (653)
                      .   .....+||+.|+|||++.+..++.++||||+||++|||++|+.||........... ......             
T Consensus       158 ~---~~~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (322)
T d1s9ja_         158 S---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPG  234 (322)
T ss_dssp             H---TC---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC-------------------
T ss_pred             C---ccccccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCccccccc
Confidence            2   22345899999999999999999999999999999999999999976443211100 000000             


Q ss_pred             ---------hhcccchhHhhhhccCc----C-CHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 048419          554 ---------LHLEGEITQAIDQTLDY----Y-DLAEAELVLNLGLFCSAPNPVYRPDMRRVVEF  603 (653)
Q Consensus       554 ---------~~~~~~~~~~~d~~l~~----~-~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  603 (653)
                               ........+..+.....    . .......+.+++.+||+.||.+|||++|++++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~H  298 (322)
T d1s9ja_         235 RPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH  298 (322)
T ss_dssp             -----------CCCCHHHHHHHHHTSCCCCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             ccccccccccccchhHHHHHhhhhccCCccCccccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence                     00000000111100000    0 00123568899999999999999999999985

>d1ukga_ b.29.1.1 (A:) Legume lectin {Bloodwood tree (Pterocarpus angolensis) [TaxId: 182271]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Bloodwood tree (Pterocarpus angolensis) [TaxId: 182271]

Probab=100.00  E-value=1.4e-47  Score=380.87  Aligned_cols=224  Identities=25%  Similarity=0.404  Sum_probs=194.0

Q ss_pred             CceeEEeCCCCC--CCeEEecceEecCCCcEEecCCC------CCceEEEEcCCCeecccCCCCceeeeEEEEEEEEecC
Q 048419            7 DTTSFLYNGFLH--ANLSLEGAAYISTSGILTVTNKS------EGLIGHALYPNPLRFKTSNKSVAIDFRTNFVFSILPK   78 (653)
Q Consensus         7 ~~~~f~~~~f~~--~~l~~~g~a~~~~~g~l~Lt~~~------~~~~Gr~~y~~pi~~~~~~~~~~~sF~t~F~f~i~~~   78 (653)
                      +++||+|++|.+  +||+|+|||.+. ++.|+||++.      .+++|||+|++||+||++.+++++||+|+|+|.|..+
T Consensus         2 ~~~sF~f~~F~~~~~~l~l~G~A~i~-~~~i~LT~~~~~~~~~~~~~G~~~y~~Pi~l~~~~~~~~~sF~t~F~f~i~~~   80 (241)
T d1ukga_           2 DSLSFGFPTFPSDQKNLIFQGDAQIK-NNAVQLTKTDSNGNPVASTVGRILFSAQVHLWEKSSSRVANFQSQFSFSLKSP   80 (241)
T ss_dssp             CEEEEEESSCCSCCSSEEEEETCEEE-TTEEECSCBCTTSCBCSSEEEEEEESSCEECEETTTTEEEEEEEEEEEEEECS
T ss_pred             ccEEEEeCCCCCCCCCEEEeeeEEEe-CCEEEeCCCCCCCCccccceEEEEeCCCeecccCCCCceeeeEEEEEEEEecC
Confidence            679999999954  789999999996 7889999864      4689999999999999999999999999999999765


Q ss_pred             CCCCCCCceEEEEecCC-CCCCCCCCccccCCCcccCCCCCCCCceEEEEeeccccccc--CCCCCCeeeEecCCCCcCC
Q 048419           79 YPDLGGQGLAFIIISTN-RPENCLANQFLGLPNITMSSSTKFSTRMLAVEFDIIQNTEL--IDINDNHVGIDISSLISSA  155 (653)
Q Consensus        79 ~~~~~gdGlaF~l~~~~-~~~~~~~g~~lG~~~~~~~~~~~~~~~~vaVEFDt~~n~~~--~d~~~~Hvgid~ns~~s~~  155 (653)
                      . ..+|||+|||+.+.. ..+...+|+++|+++.... .+...++.+||||||++|.+.  +||+++|||||+|++.|.+
T Consensus        81 ~-~~~~~g~~f~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~n~~vaVEfDt~~n~~~~~~~~~~~Higid~n~~~s~~  158 (241)
T d1ukga_          81 L-SNGADGIAFFIAPPDTTIPSGSGGGLLGLFAPGTA-QNTSANQVIAVEFDTFYAQDSNTWDPNYPHIGIDVNSIRSVK  158 (241)
T ss_dssp             S-SSCCCEEEEEEECTTCCCCTTCCGGGTTTSCGGGT-TCGGGCCCEEEEEECCCCTTTCTTSCSSCEEEEEESSSSCSE
T ss_pred             C-CCCCCceEEEEeCCCCCcccccCcccccccccccc-cCCccCcccceeccCEecCccCCCCCCCccEeeecCCccccc
Confidence            3 458999999999765 4466777888888876543 245678899999999998654  4689999999999999876


Q ss_pred             cccCccccCCCCccccccCCCCceEEEEEecCCceEEEEEEeeCCCCCCCCCceeeeecCCcccccceEEeEecccCccc
Q 048419          156 SEPASYYSGNNHRIPILLRSGDPIQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLIT  235 (653)
Q Consensus       156 ~~~~~~~~~~~~~~~~~l~~g~~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~~l~~~~dL~~~l~~~~~vGFsastg~~~  235 (653)
                      ...            .++.+|+.++|||+|++.+++|+|++...   ++..|.+++.|||+.+|+++||||||||||...
T Consensus       159 ~~~------------~~~~~g~~~~v~I~Yd~~~~~L~v~~~~~---~~~~~~l~~~vdL~~~l~~~~yvGFSAsTG~~~  223 (241)
T d1ukga_         159 TVK------------WDRRDGQSLNVLVTFNPSTRNLDVVATYS---DGTRYEVSYEVDVRSVLPEWVRVGFSAASGEQY  223 (241)
T ss_dssp             EEE------------CCCCTTCCEEEEEEEETTTTEEEEEEEET---TCCEEEEEEECCGGGTSCSEEEEEEEEEESSSC
T ss_pred             ccc------------cccCCCcEEEEEEEEeCCCcEEEEEEccC---CCCceEEEEEEehHHhCCCcEEEEEEEecCCCC
Confidence            543            35689999999999999999999999874   466788999999999999999999999999999


Q ss_pred             ceeeecceeeeec
Q 048419          236 ASHNVHGWSISIG  248 (653)
Q Consensus       236 ~~~~i~sWsf~~~  248 (653)
                      |.|+|++|+|++.
T Consensus       224 ~~H~IlsWsFss~  236 (241)
T d1ukga_         224 QTHTLESWSFTST  236 (241)
T ss_dssp             CEEEEEEEEEEEE
T ss_pred             ceeEEEEeEEEEE
Confidence            9999999999864

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.8e-49  Score=403.89  Aligned_cols=249  Identities=22%  Similarity=0.290  Sum_probs=206.0

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC---chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN---SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVY  406 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  406 (653)
                      ++|+..+.||+|+||+||+|++..+|+.||||++...   .....+.+.+|++++++++||||+++++++.+.+.+++||
T Consensus         8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivm   87 (288)
T d1uu3a_           8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL   87 (288)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEEE
T ss_pred             CCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEEEE
Confidence            4688999999999999999999989999999998643   2334577999999999999999999999999999999999


Q ss_pred             eccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccccc
Q 048419          407 DYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE  486 (653)
Q Consensus       407 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~  486 (653)
                      |||++|+|.+++...     ..+++.+++.++.|++.||+|||+   ++|+||||||+|||+++++.+||+|||+++.+.
T Consensus        88 Ey~~gg~L~~~~~~~-----~~l~e~~~~~~~~qi~~al~ylH~---~~iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~  159 (288)
T d1uu3a_          88 SYAKNGELLKYIRKI-----GSFDETCTRFYTAEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLS  159 (288)
T ss_dssp             CCCTTEEHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred             EccCCCCHHHhhhcc-----CCCCHHHHHHHHHHHHHHHHhhcc---ccEEcCcCCccccccCCCceEEecccccceecc
Confidence            999999999998764     348999999999999999999999   999999999999999999999999999999775


Q ss_pred             CCCC-CcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhh
Q 048419          487 HGAN-PQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAID  565 (653)
Q Consensus       487 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d  565 (653)
                      .... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.......   +...+.    .+..     
T Consensus       160 ~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~---~~~~i~----~~~~-----  227 (288)
T d1uu3a_         160 PESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL---IFQKII----KLEY-----  227 (288)
T ss_dssp             ----------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHHHHH----TTCC-----
T ss_pred             cCCcccccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcCHHH---HHHHHH----cCCC-----
Confidence            4322 23344679999999999999999999999999999999999999998654322   111111    1110     


Q ss_pred             hccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 048419          566 QTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVE  602 (653)
Q Consensus       566 ~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~  602 (653)
                          .++....+.+.+|+.+||+.||.+|||++|+++
T Consensus       228 ----~~p~~~s~~~~~li~~~L~~dP~~R~t~~e~~~  260 (288)
T d1uu3a_         228 ----DFPEKFFPKARDLVEKLLVLDATKRLGCEEMEG  260 (288)
T ss_dssp             ----CCCTTCCHHHHHHHHTTSCSSGGGSTTSGGGTC
T ss_pred             ----CCCccCCHHHHHHHHHHccCCHhHCcCHHHHcC
Confidence                011122456889999999999999999999754

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8e-49  Score=399.90  Aligned_cols=255  Identities=28%  Similarity=0.394  Sum_probs=202.7

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEecc
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYV  409 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~  409 (653)
                      ++|+..+.||+|+||.||+|.++. +..||||++.... ...+.|.+|+.++++++|+|||+++|+|.+ +..++|||||
T Consensus        17 ~~~~i~~~iG~G~fg~Vy~~~~~~-~~~vAiK~l~~~~-~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~-~~~~lv~Ey~   93 (285)
T d1fmka3          17 ESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYM   93 (285)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETT-TEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCC
T ss_pred             HHEEEeeEEeeCCCeEEEEEEECC-CCEEEEEEECccc-CCHHHHHHHHHHHHhcccCCEeEEEEEEec-CCeEEEEEec
Confidence            468889999999999999999975 4679999996443 345789999999999999999999999965 5689999999


Q ss_pred             CCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCC
Q 048419          410 PNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGA  489 (653)
Q Consensus       410 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~  489 (653)
                      ++|+|..++....   ...++|.+++.++.||++||+|||+   ++|+||||||+||||+.++++||+|||+++......
T Consensus        94 ~~g~l~~~~~~~~---~~~l~~~~~~~i~~~i~~gl~~LH~---~~ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~~  167 (285)
T d1fmka3          94 SKGSLLDFLKGET---GKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE  167 (285)
T ss_dssp             TTCBHHHHHSHHH---HTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCCTTC------
T ss_pred             CCCchhhhhhhcc---cccchHHHHHHHHHHHHHHHHHHhh---hheecccccceEEEECCCCcEEEcccchhhhccCCC
Confidence            9999999987653   3459999999999999999999999   899999999999999999999999999998775544


Q ss_pred             CCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhccC
Q 048419          490 NPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQTLD  569 (653)
Q Consensus       490 ~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~  569 (653)
                      ........||+.|+|||++....++.++|||||||++|||+||+.|+.......+  +...+.....            .
T Consensus       168 ~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~~--~~~~i~~~~~------------~  233 (285)
T d1fmka3         168 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE--VLDQVERGYR------------M  233 (285)
T ss_dssp             --------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH--HHHHHHTTCC------------C
T ss_pred             ceeeccccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCHHH--HHHHHHhcCC------------C
Confidence            4444456789999999999999999999999999999999998777654433221  1222221110            0


Q ss_pred             cCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcCC
Q 048419          570 YYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLGD  607 (653)
Q Consensus       570 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  607 (653)
                      ..+....+.+.+++.+||+.||++||+|.+|+++|+.-
T Consensus       234 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~~  271 (285)
T d1fmka3         234 PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY  271 (285)
T ss_dssp             CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTT
T ss_pred             CCCcccCHHHHHHHHHHcccCHhHCcCHHHHHHHHhhh
Confidence            11122346788999999999999999999999999763

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.9e-49  Score=408.50  Aligned_cols=259  Identities=25%  Similarity=0.371  Sum_probs=207.7

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCC-----cEEEEEEeccC-chhhHHHHHHHHHHHhhc-CCCceeeeeeeeccccee
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLG-----LEVAIKRIGHN-SQQGMKEFVAEIMSMGRL-RHRNLVQLHGWCRKQDEL  402 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~-----~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~  402 (653)
                      ++|+..++||+|+||+||+|++...+     ..||||.+... .......+.+|+.++.++ +|||||+++++|.+.+.+
T Consensus        37 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~  116 (325)
T d1rjba_          37 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPI  116 (325)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             HHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCCeE
Confidence            56888999999999999999976543     36999998654 334456789999999998 899999999999999999


Q ss_pred             EEEEeccCCCCchhhhhccccc------------------ccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCC
Q 048419          403 LLVYDYVPNGSLDKLLFDKDHK------------------LRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPS  464 (653)
Q Consensus       403 ~lV~E~~~~gsL~~~l~~~~~~------------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~  464 (653)
                      ++|||||++|+|.++|......                  ....++|..++.++.||++||+|||+   ++|+||||||+
T Consensus       117 ~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~---~~IiHRDlKp~  193 (325)
T d1rjba_         117 YLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF---KSCVHRDLAAR  193 (325)
T ss_dssp             EEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHH---TTEEETTCSGG
T ss_pred             EEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCchh
Confidence            9999999999999999765321                  12358999999999999999999999   89999999999


Q ss_pred             cEEEcCCCcEEEEeecCcccccCCCCC-cccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhh
Q 048419          465 NILLDTYLNAKLGDFGLAKIYEHGANP-QTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAA  542 (653)
Q Consensus       465 NIll~~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~  542 (653)
                      |||++.++++||+|||+|+........ ......||+.|+|||++.+..++.++|||||||++|||+| |+.||......
T Consensus       194 Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~~  273 (325)
T d1rjba_         194 NVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVD  273 (325)
T ss_dssp             GEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS
T ss_pred             ccccccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCCCHH
Confidence            999999999999999999876544332 2234568999999999999999999999999999999998 89999764432


Q ss_pred             hHHHHHHHHHhhhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          543 AELLLVDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       543 ~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                      ..  +...+.....           + ..+....+.+.+|+.+||+.||++|||++||+++|.
T Consensus       274 ~~--~~~~~~~~~~-----------~-~~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~  322 (325)
T d1rjba_         274 AN--FYKLIQNGFK-----------M-DQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLG  322 (325)
T ss_dssp             HH--HHHHHHTTCC-----------C-CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             HH--HHHHHhcCCC-----------C-CCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHh
Confidence            21  1122211110           0 111223467899999999999999999999999985

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=100.00  E-value=3.3e-48  Score=406.73  Aligned_cols=255  Identities=23%  Similarity=0.313  Sum_probs=213.3

Q ss_pred             hcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEec
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDY  408 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~  408 (653)
                      -++|+..+.||+|+||.||+|++..+|+.||||++........+.+.+|+.+|++++|||||++++++.+.+.+++||||
T Consensus        25 l~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~  104 (350)
T d1koaa2          25 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF  104 (350)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             ccCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEc
Confidence            35899999999999999999999999999999999877666778899999999999999999999999999999999999


Q ss_pred             cCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEc--CCCcEEEEeecCccccc
Q 048419          409 VPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLD--TYLNAKLGDFGLAKIYE  486 (653)
Q Consensus       409 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~--~~~~~kl~DfGla~~~~  486 (653)
                      |++|+|.+++....    ..+++.+++.++.||+.||.|||+   ++|+||||||+||||+  .++.+||+|||+++...
T Consensus       105 ~~gg~L~~~l~~~~----~~l~e~~~~~i~~qi~~aL~ylH~---~~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~  177 (350)
T d1koaa2         105 MSGGELFEKVADEH----NKMSEDEAVEYMRQVCKGLCHMHE---NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLD  177 (350)
T ss_dssp             CCSCBHHHHHTCTT----SCBCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSTTSCCEEECCCTTCEECC
T ss_pred             CCCCCHHHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHh---cCCeeeeechhHeeeccCCCCeEEEeecchheecc
Confidence            99999999986542    358999999999999999999999   9999999999999995  46789999999998765


Q ss_pred             CCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhh
Q 048419          487 HGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQ  566 (653)
Q Consensus       487 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  566 (653)
                      ...  ......||+.|+|||++.+..++.++|||||||++|||++|+.||......+.   ...+...  ......... 
T Consensus       178 ~~~--~~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~---~~~i~~~--~~~~~~~~~-  249 (350)
T d1koaa2         178 PKQ--SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDET---LRNVKSC--DWNMDDSAF-  249 (350)
T ss_dssp             TTS--CEEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH---HHHHHHT--CCCSCCGGG-
T ss_pred             ccc--ccceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCHHHH---HHHHHhC--CCCCCcccc-
Confidence            432  33446899999999999999999999999999999999999999986543221   1111111  001110000 


Q ss_pred             ccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          567 TLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       567 ~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                            ....+.+.+|+.+||+.||.+|||++|++++-
T Consensus       250 ------~~~s~~~~~li~~~L~~dP~~R~t~~eil~hp  281 (350)
T d1koaa2         250 ------SGISEDGKDFIRKLLLADPNTRMTIHQALEHP  281 (350)
T ss_dssp             ------GGCCHHHHHHHHHHCCSSGGGSCCHHHHHHST
T ss_pred             ------cCCCHHHHHHHHHHccCChhHCcCHHHHhcCc
Confidence                  11235688999999999999999999999973

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=8.9e-49  Score=404.25  Aligned_cols=247  Identities=30%  Similarity=0.393  Sum_probs=204.8

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc---hhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS---QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVY  406 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  406 (653)
                      +.|+..+.||+|+||+||+|++..+++.||||++....   ....+.+.+|+.+|++++|||||++++++.+.+.+++||
T Consensus        15 ~~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv~   94 (309)
T d1u5ra_          15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM   94 (309)
T ss_dssp             HHEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             HhcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEEE
Confidence            35888999999999999999999999999999997543   344567899999999999999999999999999999999


Q ss_pred             eccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccccc
Q 048419          407 DYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE  486 (653)
Q Consensus       407 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~  486 (653)
                      |||++|+|..++...     ..+++.+++.++.||+.||.|||+   ++|+||||||+||||+.++++||+|||+++...
T Consensus        95 E~~~~g~l~~~~~~~-----~~l~e~~~~~i~~qi~~aL~yLH~---~~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~  166 (309)
T d1u5ra_          95 EYCLGSASDLLEVHK-----KPLQEVEIAAVTHGALQGLAYLHS---HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMA  166 (309)
T ss_dssp             ECCSEEHHHHHHHHT-----SCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEEETTTEEEECCCTTCBSSS
T ss_pred             EecCCCchHHHHHhC-----CCCCHHHHHHHHHHHHHHHHHHHh---CCEeccCCCcceEEECCCCCEEEeecccccccC
Confidence            999999997766543     458999999999999999999999   999999999999999999999999999998654


Q ss_pred             CCCCCcccccccCCcccCcccccc---CCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHh
Q 048419          487 HGANPQTTHIVGTLGYLAPELTRT---GKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQA  563 (653)
Q Consensus       487 ~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~  563 (653)
                      .     .....||+.|+|||++.+   ..++.++|||||||++|||++|+.||.........  .....     +..   
T Consensus       167 ~-----~~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~~~--~~i~~-----~~~---  231 (309)
T d1u5ra_         167 P-----ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSAL--YHIAQ-----NES---  231 (309)
T ss_dssp             S-----BCCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH--HHHHH-----SCC---
T ss_pred             C-----CCccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHHHHH--HHHHh-----CCC---
Confidence            3     234579999999999864   45899999999999999999999999765432211  11110     000   


Q ss_pred             hhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 048419          564 IDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEF  603 (653)
Q Consensus       564 ~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  603 (653)
                        +.+  ......+.+.+|+.+||+.||.+|||+.|++++
T Consensus       232 --~~~--~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~H  267 (309)
T d1u5ra_         232 --PAL--QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH  267 (309)
T ss_dssp             --CCC--SCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred             --CCC--CCCCCCHHHHHHHHHHCcCChhHCcCHHHHHhC
Confidence              111  011224678899999999999999999999984

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=4.8e-49  Score=406.09  Aligned_cols=255  Identities=22%  Similarity=0.351  Sum_probs=195.2

Q ss_pred             hhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc-hhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEE
Q 048419          328 VTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS-QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVY  406 (653)
Q Consensus       328 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  406 (653)
                      +.+.|+..+.||+|+||+||+|.+..+++.||||++.... ....+.+.+|+.+|++++|||||++++++.+.+.++|||
T Consensus         7 i~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lvm   86 (307)
T d1a06a_           7 IRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIM   86 (307)
T ss_dssp             GGGTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             CccceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence            4567999999999999999999999999999999997543 233456789999999999999999999999999999999


Q ss_pred             eccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEc---CCCcEEEEeecCcc
Q 048419          407 DYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLD---TYLNAKLGDFGLAK  483 (653)
Q Consensus       407 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~---~~~~~kl~DfGla~  483 (653)
                      |||++|+|.++|...     ..+++.++..++.||+.||+|||+   ++|+||||||+|||+.   +++.+||+|||+++
T Consensus        87 E~~~gg~L~~~l~~~-----~~l~e~~~~~~~~qi~~al~ylH~---~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~  158 (307)
T d1a06a_          87 QLVSGGELFDRIVEK-----GFYTERDASRLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK  158 (307)
T ss_dssp             CCCCSCBHHHHHHTC-----SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESSSSTTCCEEECCC----
T ss_pred             eccCCCcHHHhhhcc-----cCCCHHHHHHHHHHHHHHHHhhhh---ceeeeEEecccceeecccCCCceEEEeccceeE
Confidence            999999999999764     358999999999999999999999   9999999999999994   57899999999998


Q ss_pred             cccCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHh
Q 048419          484 IYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQA  563 (653)
Q Consensus       484 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~  563 (653)
                      ......  ......||+.|+|||++.+..++.++|||||||++|||++|+.||.......   +...+....  ....  
T Consensus       159 ~~~~~~--~~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~---~~~~i~~~~--~~~~--  229 (307)
T d1a06a_         159 MEDPGS--VLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAK---LFEQILKAE--YEFD--  229 (307)
T ss_dssp             ----------------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH---HHHHHHTTC--CCCC--
T ss_pred             EccCCC--eeeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHHH---HHHHHhccC--CCCC--
Confidence            654332  2334679999999999999999999999999999999999999998654322   111111110  0000  


Q ss_pred             hhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          564 IDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       564 ~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                           ........+.+.+|+.+||+.||.+|||+.|++++-
T Consensus       230 -----~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp  265 (307)
T d1a06a_         230 -----SPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHP  265 (307)
T ss_dssp             -----TTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHST
T ss_pred             -----CccccCCCHHHHHHHHHHccCCHhHCcCHHHHhcCH
Confidence                 001112246788999999999999999999999963

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=100.00  E-value=1.2e-47  Score=402.73  Aligned_cols=255  Identities=21%  Similarity=0.255  Sum_probs=213.5

Q ss_pred             hcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEec
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDY  408 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~  408 (653)
                      -++|+..+.||+|+||.||+|.+..+|+.||||++........+.+.+|+++|++|+|||||++++++.+.+.++|||||
T Consensus        28 ~d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE~  107 (352)
T d1koba_          28 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF  107 (352)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEc
Confidence            45799999999999999999999989999999999877666677889999999999999999999999999999999999


Q ss_pred             cCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEc--CCCcEEEEeecCccccc
Q 048419          409 VPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLD--TYLNAKLGDFGLAKIYE  486 (653)
Q Consensus       409 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~--~~~~~kl~DfGla~~~~  486 (653)
                      |++|+|.+++....    ..+++.+++.++.||+.||.|||+   ++|+||||||+||||+  .++.+||+|||+++...
T Consensus       108 ~~gg~L~~~~~~~~----~~l~e~~~~~i~~qi~~aL~ylH~---~~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~  180 (352)
T d1koba_         108 LSGGELFDRIAAED----YKMSEAEVINYMRQACEGLKHMHE---HSIVHLDIKPENIMCETKKASSVKIIDFGLATKLN  180 (352)
T ss_dssp             CCCCBHHHHTTCTT----CCBCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSTTCCCEEECCCTTCEECC
T ss_pred             CCCChHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecccccccccccccCCCeEEEeecccceecC
Confidence            99999998876542    358999999999999999999999   9999999999999997  67899999999999775


Q ss_pred             CCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhh
Q 048419          487 HGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQ  566 (653)
Q Consensus       487 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  566 (653)
                      ...  ......||+.|+|||++.+..++.++|||||||++|||+||+.||........   ...+....  ....     
T Consensus       181 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~---~~~i~~~~--~~~~-----  248 (352)
T d1koba_         181 PDE--IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLET---LQNVKRCD--WEFD-----  248 (352)
T ss_dssp             TTS--CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHH---HHHHHHCC--CCCC-----
T ss_pred             CCC--ceeeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHhCC--CCCC-----
Confidence            432  33446799999999999999999999999999999999999999986544321   11111110  0000     


Q ss_pred             ccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          567 TLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       567 ~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                        ..........+.+|+.+||+.||.+|||+.|++++-
T Consensus       249 --~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~Hp  284 (352)
T d1koba_         249 --EDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHP  284 (352)
T ss_dssp             --SSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTST
T ss_pred             --cccccCCCHHHHHHHHHHccCChhHCcCHHHHhcCH
Confidence              001112245688999999999999999999999863

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-47  Score=393.83  Aligned_cols=255  Identities=23%  Similarity=0.338  Sum_probs=210.6

Q ss_pred             hhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc------hhhHHHHHHHHHHHhhcCCCceeeeeeeecccce
Q 048419          328 VTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS------QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDE  401 (653)
Q Consensus       328 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~------~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~  401 (653)
                      ..++|+..+.||+|+||+||+|++..+|+.||||++....      ....+.+.+|+.+|++++|||||++++++.+.+.
T Consensus         8 i~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~   87 (293)
T d1jksa_           8 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTD   87 (293)
T ss_dssp             GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred             cccCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCE
Confidence            3568999999999999999999999999999999986432      2236789999999999999999999999999999


Q ss_pred             eEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCC----cEEEE
Q 048419          402 LLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYL----NAKLG  477 (653)
Q Consensus       402 ~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~----~~kl~  477 (653)
                      ++||||||++|+|.+++...     ..+++.+++.++.||+.||+|||+   ++|+||||||+|||++.++    .+||+
T Consensus        88 ~~iv~E~~~gg~L~~~i~~~-----~~l~~~~~~~~~~qi~~al~yLH~---~~ivHrDiKp~Nill~~~~~~~~~vkl~  159 (293)
T d1jksa_          88 VILILELVAGGELFDFLAEK-----ESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKII  159 (293)
T ss_dssp             EEEEEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCSSSSSCCEEEC
T ss_pred             EEEEEEcCCCccccchhccc-----cccchhHHHHHHHHHHHHHHhhhh---cceeecccccceEEEecCCCcccceEec
Confidence            99999999999999999764     358999999999999999999999   9999999999999998776    49999


Q ss_pred             eecCcccccCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcc
Q 048419          478 DFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLE  557 (653)
Q Consensus       478 DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~  557 (653)
                      |||+++......  ......||+.|+|||++.+..++.++|||||||++|||++|+.||......+.   ...+...  .
T Consensus       160 DfG~a~~~~~~~--~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~---~~~i~~~--~  232 (293)
T d1jksa_         160 DFGLAHKIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET---LANVSAV--N  232 (293)
T ss_dssp             CCTTCEECTTSC--BCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH---HHHHHTT--C
T ss_pred             chhhhhhcCCCc--cccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCCHHHH---HHHHHhc--C
Confidence            999998765432  23345789999999999998999999999999999999999999986543321   1111111  0


Q ss_pred             cchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          558 GEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       558 ~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                      ........+       .....+.+|+.+||+.||.+|||++|++++-
T Consensus       233 ~~~~~~~~~-------~~s~~~~~li~~~L~~dP~~R~s~~eil~hp  272 (293)
T d1jksa_         233 YEFEDEYFS-------NTSALAKDFIRRLLVKDPKKRMTIQDSLQHP  272 (293)
T ss_dssp             CCCCHHHHT-------TSCHHHHHHHHTTSCSSGGGSCCHHHHHHST
T ss_pred             CCCCchhcC-------CCCHHHHHHHHHHccCChhHCcCHHHHhcCc
Confidence            011111111       1235688999999999999999999999853

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=4e-47  Score=393.32  Aligned_cols=246  Identities=25%  Similarity=0.327  Sum_probs=207.5

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC---chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN---SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVY  406 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  406 (653)
                      ++|+..+.||+|+||+||+|+++.+|+.||||++...   .....+.+.+|+.++++++|||||++++++.+.+.+++||
T Consensus         4 ~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivm   83 (316)
T d1fota_           4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM   83 (316)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred             hHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeeeEe
Confidence            4688899999999999999999999999999999643   2344678999999999999999999999999999999999


Q ss_pred             eccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccccc
Q 048419          407 DYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE  486 (653)
Q Consensus       407 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~  486 (653)
                      |||++|+|..++....     .+++..+..++.||+.||+|||+   ++|+||||||+||||+.++.+||+|||+++...
T Consensus        84 E~~~gg~l~~~~~~~~-----~~~~~~~~~~~~qi~~al~~lH~---~~iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~  155 (316)
T d1fota_          84 DYIEGGELFSLLRKSQ-----RFPNPVAKFYAAEVCLALEYLHS---KDIIYRDLKPENILLDKNGHIKITDFGFAKYVP  155 (316)
T ss_dssp             CCCCSCBHHHHHHHTS-----SCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECTTSCEEECCCSSCEECS
T ss_pred             eecCCccccccccccc-----cccccHHHHHHHHHHHhhhhhcc---CcEEccccCchheeEcCCCCEEEecCccceEec
Confidence            9999999999887643     47888889999999999999999   999999999999999999999999999998764


Q ss_pred             CCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhh
Q 048419          487 HGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQ  566 (653)
Q Consensus       487 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  566 (653)
                      ..    .....||+.|+|||++.+..++.++|||||||++|||++|+.||........   ...+..    +.       
T Consensus       156 ~~----~~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~---~~~i~~----~~-------  217 (316)
T d1fota_         156 DV----TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKT---YEKILN----AE-------  217 (316)
T ss_dssp             SC----BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH---HHHHHH----CC-------
T ss_pred             cc----cccccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCHHHH---HHHHHc----CC-------
Confidence            32    2346899999999999999999999999999999999999999986543221   111110    10       


Q ss_pred             ccCcCCHHHHHHHHHHHHHcCCCCCCCCC-----CHHHHHHH
Q 048419          567 TLDYYDLAEAELVLNLGLFCSAPNPVYRP-----DMRRVVEF  603 (653)
Q Consensus       567 ~l~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~  603 (653)
                       . ..+......+.+++.+||+.||.+||     |++|++++
T Consensus       218 -~-~~p~~~s~~~~~li~~~L~~dp~~R~~~~r~t~~~il~H  257 (316)
T d1fota_         218 -L-RFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH  257 (316)
T ss_dssp             -C-CCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred             -C-CCCCCCCHHHHHHHHHHhhhCHHhccccchhhHHHHHcC
Confidence             0 01112235688999999999999996     99999875

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.8e-47  Score=393.54  Aligned_cols=249  Identities=27%  Similarity=0.336  Sum_probs=209.9

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC---chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN---SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVY  406 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  406 (653)
                      ++|+..+.||+|+||.||+|++..+|+.||||++.+.   .....+.+.+|+.+|++++||||+++++++.+.+.+++||
T Consensus         5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~iv~   84 (337)
T d1o6la_           5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM   84 (337)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeeccccccccce
Confidence            5689999999999999999999999999999999653   2344677899999999999999999999999999999999


Q ss_pred             eccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccccc
Q 048419          407 DYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE  486 (653)
Q Consensus       407 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~  486 (653)
                      |||++|+|.+++...     ..+++..++.++.||+.||+|||+   ++|+||||||+|||++.++.+||+|||+++...
T Consensus        85 ey~~gg~L~~~~~~~-----~~~~e~~~~~~~~qil~al~ylH~---~~iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~  156 (337)
T d1o6la_          85 EYANGGELFFHLSRE-----RVFTEERARFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGI  156 (337)
T ss_dssp             ECCTTCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCSC
T ss_pred             eccCCCchhhhhhcc-----cCCcHHHHHHHHHHHhhhhhhhhh---cCccccccCHHHeEecCCCCEEEeecccccccc
Confidence            999999999998764     348889999999999999999999   999999999999999999999999999998654


Q ss_pred             CCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhh
Q 048419          487 HGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQ  566 (653)
Q Consensus       487 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  566 (653)
                      ... ......+||+.|+|||++.+..++.++||||+||++|||++|+.||.......   +...+..    +.+      
T Consensus       157 ~~~-~~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~~---~~~~i~~----~~~------  222 (337)
T d1o6la_         157 SDG-ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER---LFELILM----EEI------  222 (337)
T ss_dssp             CTT-CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHHHHHH----CCC------
T ss_pred             cCC-cccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCHHH---HHHHHhc----CCC------
Confidence            322 23345689999999999999999999999999999999999999998765432   1111111    100      


Q ss_pred             ccCcCCHHHHHHHHHHHHHcCCCCCCCCCC-----HHHHHHH
Q 048419          567 TLDYYDLAEAELVLNLGLFCSAPNPVYRPD-----MRRVVEF  603 (653)
Q Consensus       567 ~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs-----~~evl~~  603 (653)
                         .++......+.+|+.+||+.||.+||+     +.|++++
T Consensus       223 ---~~p~~~s~~~~dli~~~L~~dP~~R~~~~~~~~~eil~H  261 (337)
T d1o6la_         223 ---RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH  261 (337)
T ss_dssp             ---CCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred             ---CCCccCCHHHHHHHHhhccCCchhhcccccccHHHHHcC
Confidence               111122456789999999999999995     8889875

>d1avba_ b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Phytohemagglutinin-L, PHA-L, also arcelin
species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]

Probab=100.00  E-value=1.6e-47  Score=376.53  Aligned_cols=218  Identities=28%  Similarity=0.430  Sum_probs=193.8

Q ss_pred             cCceeEEeCCCCCCCeEEecceEecCCCcEEecCC---CCCceEEEEcCCCeecccCCCCceeeeEEEEEEEEecCCCCC
Q 048419            6 ADTTSFLYNGFLHANLSLEGAAYISTSGILTVTNK---SEGLIGHALYPNPLRFKTSNKSVAIDFRTNFVFSILPKYPDL   82 (653)
Q Consensus         6 ~~~~~f~~~~f~~~~l~~~g~a~~~~~g~l~Lt~~---~~~~~Gr~~y~~pi~~~~~~~~~~~sF~t~F~f~i~~~~~~~   82 (653)
                      ++++||+|+.|+..||+|+|||++.++|.|+||+.   ..+++|||+|++||+||++.++.++||+|+|+|.|.+.+...
T Consensus         1 ~~~~sf~f~~F~~~nl~l~GdA~v~~~g~i~LT~~~~~~~~~~G~~~y~~Pv~l~~~~~~~~~sF~t~f~f~i~~~~~~~   80 (226)
T d1avba_           1 SNDASFNVETFNKTNLILQGDATVSSEGHLLLTNVKGNEEDSMGRAFYSAPIQINDRTIDNLASFSTNFTFRINAKNIEN   80 (226)
T ss_dssp             CEEEEEEESSCCGGGEEEEETCEECTTSCEECSCSSSCCTTCEEEEEESSCEECEEGGGTEEEEEEEEEEEEEEESSTTS
T ss_pred             CCceEEECCCCCccceeEecceEECCCCeEEccCCCCCCccceEEEEeCCCeEcccCCCCcccceEEEEEEEEecCCCCC
Confidence            35789999999999999999999988899999964   457899999999999999999999999999999999887788


Q ss_pred             CCCceEEEEecCCCCCCCCCCccccCCCcccCCCCCCCCceEEEEeecccccccCCCCCCeeeEecCCCCcCCcccCccc
Q 048419           83 GGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTKFSTRMLAVEFDIIQNTELIDINDNHVGIDISSLISSASEPASYY  162 (653)
Q Consensus        83 ~gdGlaF~l~~~~~~~~~~~g~~lG~~~~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~~~Hvgid~ns~~s~~~~~~~~~  162 (653)
                      +||||||+|+|....+ +..|+++|+++.            ++|||||+.|...+|+..||||||+|+..+..+.+..  
T Consensus        81 ~gDG~aF~i~~~~~~~-g~~gg~~gl~~~------------~~v~fdt~~~~~~~d~~~nhi~i~~n~~~s~~~~~~~--  145 (226)
T d1avba_          81 SAYGLAFALVPVGSRP-KLKGRYLGLFNT------------TNYDRDAHTVAVVFDTVSNRIEIDVNSIRPIATESCN--  145 (226)
T ss_dssp             CCEEEEEEEEETTCCC-CCCGGGTTTCSC------------SSCCGGGCCEEEEEETTTTEEEEEESSSSCSEEEECC--
T ss_pred             CCceEEEEEccCCCCC-CCccccCCcccc------------ccccccceeccccccCCCCEEEEeCCCCccccccccc--
Confidence            9999999999987544 467788999753            4799999999777899999999999999887776543  


Q ss_pred             cCCCCccccccCCCCceEEEEEecCCceEEEEEEeeCCCCCCCCCceeeeecCCcccccceEEeEecccCc---ccceee
Q 048419          163 SGNNHRIPILLRSGDPIQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGL---ITASHN  239 (653)
Q Consensus       163 ~~~~~~~~~~l~~g~~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~~l~~~~dL~~~l~~~~~vGFsastg~---~~~~~~  239 (653)
                              ..+.+|+.++|||+|++.+++|+|++...+  ++..|.++..+||+.+||++|||||||+||.   ..|.|+
T Consensus       146 --------~~~~~g~~~~v~I~Yd~~~~~L~V~l~~~~--~~~~~~~~~~vdL~~~l~~~~y~GFSAaTG~~s~~~~~H~  215 (226)
T d1avba_         146 --------FGHNNGEKAEVRITYDSPKNDLRVSLLYPS--SEEKCHVSATVPLEKEVEDWVSVGFSATSGSKKETTETHN  215 (226)
T ss_dssp             --------SGGGTTCEEEEEEEEEGGGTEEEEEEEETT--TTEEEEEEEECCHHHHSCSEEEEEEEEEECSSGGGCEEEE
T ss_pred             --------cccCCCeEEEEEEEEcCCCcEEEEEEEeCC--CCccEEEEEEecHHHccCCcEEEEEEEEcCCCCCCeeeeE
Confidence                    367899999999999999999999998765  5777889999999999999999999999995   467899


Q ss_pred             ecceeeeec
Q 048419          240 VHGWSISIG  248 (653)
Q Consensus       240 i~sWsf~~~  248 (653)
                      |+||+|++.
T Consensus       216 IlsWsF~s~  224 (226)
T d1avba_         216 VLSWSFSSN  224 (226)
T ss_dssp             EEEEEEEEE
T ss_pred             EEEEEeEEe
Confidence            999999863

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-47  Score=389.57  Aligned_cols=254  Identities=24%  Similarity=0.375  Sum_probs=196.9

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCC---CcEEEEEEeccC-chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSL---GLEVAIKRIGHN-SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLV  405 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~---~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV  405 (653)
                      ++|+..+.||+|+||.||+|.+..+   +..||||.++.. .....+.|.+|+.++++++|||||+++++|. .+.+++|
T Consensus         7 ~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~iv   85 (273)
T d1mp8a_           7 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWII   85 (273)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEEE
T ss_pred             HHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCeEEEE
Confidence            5688899999999999999998643   357999998654 4445678999999999999999999999996 4678999


Q ss_pred             EeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccc
Q 048419          406 YDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIY  485 (653)
Q Consensus       406 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~  485 (653)
                      |||+++|+|.+++....    ..+++.+++.++.||++||.|||+   ++|+||||||+||++++++.+||+|||+++..
T Consensus        86 ~E~~~~g~l~~~~~~~~----~~l~~~~~~~~~~qi~~gl~ylH~---~~iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~  158 (273)
T d1mp8a_          86 MELCTLGELRSFLQVRK----YSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM  158 (273)
T ss_dssp             EECCTTEEHHHHHHHTT----TTSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECC-------
T ss_pred             EEeccCCcHHhhhhccC----CCCCHHHHHHHHHHHHHHhhhhcc---cCeeccccchhheeecCCCcEEEccchhheec
Confidence            99999999999876543    458999999999999999999999   99999999999999999999999999999877


Q ss_pred             cCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhhcccchhHhh
Q 048419          486 EHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELHLEGEITQAI  564 (653)
Q Consensus       486 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  564 (653)
                      ............||+.|+|||.+.+..++.++|||||||++|||+| |+.||......+   +...+..    +..    
T Consensus       159 ~~~~~~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~---~~~~i~~----~~~----  227 (273)
T d1mp8a_         159 EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND---VIGRIEN----GER----  227 (273)
T ss_dssp             ------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG---HHHHHHT----TCC----
T ss_pred             cCCcceeccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCHHH---HHHHHHc----CCC----
Confidence            6544444555678999999999999999999999999999999998 888887654432   1111211    110    


Q ss_pred             hhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          565 DQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       565 d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                          ...+...++.+.+|+.+||+.||.+|||+.||+++|+.
T Consensus       228 ----~~~~~~~~~~~~~li~~cl~~dp~~Rps~~ei~~~L~~  265 (273)
T d1mp8a_         228 ----LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLST  265 (273)
T ss_dssp             ----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             ----CCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence                01112234678999999999999999999999998853

>d1ioaa_ b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris), G02771, arcelin-5a [TaxId: 3885]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Phytohemagglutinin-L, PHA-L, also arcelin
species: Kidney bean (Phaseolus vulgaris), G02771, arcelin-5a [TaxId: 3885]

Probab=100.00  E-value=3.1e-47  Score=374.81  Aligned_cols=216  Identities=29%  Similarity=0.455  Sum_probs=185.8

Q ss_pred             cCceeEEeCCCCC-CCeEEecceEecCCCcEEecCCCC------CceEEEEcCCCeecccCCCCceeeeEEEEEEEEecC
Q 048419            6 ADTTSFLYNGFLH-ANLSLEGAAYISTSGILTVTNKSE------GLIGHALYPNPLRFKTSNKSVAIDFRTNFVFSILPK   78 (653)
Q Consensus         6 ~~~~~f~~~~f~~-~~l~~~g~a~~~~~g~l~Lt~~~~------~~~Gr~~y~~pi~~~~~~~~~~~sF~t~F~f~i~~~   78 (653)
                      |+.++|+|++|+. .+|+|+|||++.++|.|+||+...      +++|||+|++||+||+  +++++||+|+|+|.|.+.
T Consensus         1 a~~~sF~f~~F~~~~~l~l~GdA~i~~~g~l~LT~~~~~~~~~~~s~G~a~y~~Pv~l~~--~~~~~sFst~F~f~i~~~   78 (228)
T d1ioaa_           1 ATETSFNFPNFHTDDKLILQGNATISSKGQLQLTGVGSNELPRVDSLGRAFYSDPIQIKD--SNNVASFNTNFTFIIRAK   78 (228)
T ss_dssp             CCCCEEEESSCCTTSSEEEEETCEECTTSCEETTCBCTTSSBCSSCBEEEEESSCEECBC--SSCBEEEEEEEEEECCBS
T ss_pred             CccceEEcCCCCCCCcEEEeeeeEEcCCCEEEecCCCCCCccccceeEEEEECCceEecC--CCceeeEEEEEEEEEecC
Confidence            4678999999975 469999999998889999998653      5789999999999997  467999999999999988


Q ss_pred             CCCCCCCceEEEEecCCCCCCCCCCccccCCCcccCCCCCCCCceEEEEeecccccccCCCCCCeeeEecCCCCcCCccc
Q 048419           79 YPDLGGQGLAFIIISTNRPENCLANQFLGLPNITMSSSTKFSTRMLAVEFDIIQNTELIDINDNHVGIDISSLISSASEP  158 (653)
Q Consensus        79 ~~~~~gdGlaF~l~~~~~~~~~~~g~~lG~~~~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~~~Hvgid~ns~~s~~~~~  158 (653)
                      +...+||||||+|+|.+..+ +..|++||+++...   ++..++.|||||||+.|.  +|++.+||++++++..      
T Consensus        79 ~~~~~gDGlAF~l~~~~~~~-~~~g~~lgl~~~~~---~~~~~~~vave~dt~~n~--~~~~~~~~~~~~~~~~------  146 (228)
T d1ioaa_          79 NQSISAYGLAFALVPVNSPP-QKKQEFLGIFNTNN---PEPNARTVAVVFNTFKNR--IDFDKNFIKPYVNENC------  146 (228)
T ss_dssp             CTTSCCEEEEEEEEETTCCC-CCCGGGTTTCCCSS---CCGGGCCEEEEEETTTTE--EEEEESSSSCSEEEEC------
T ss_pred             CCCCCCCEEEEEEeCCCCCC-CCCccccccccccC---CCCcceeEEEEecCcccc--ccCCCCccceeccccc------
Confidence            77789999999999987544 45778999987643   355678899999999986  6888888888876422      


Q ss_pred             CccccCCCCccccccCCCCceEEEEEecCCceEEEEEEeeCCCCCCCCCceeeeecCCcccccceEEeEecccC---ccc
Q 048419          159 ASYYSGNNHRIPILLRSGDPIQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTG---LIT  235 (653)
Q Consensus       159 ~~~~~~~~~~~~~~l~~g~~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~~l~~~~dL~~~l~~~~~vGFsastg---~~~  235 (653)
                                 ...+.+|+.++|||+||+.+++|+|++....  +|..|.++..+||+++||++||||||||||   ...
T Consensus       147 -----------~~~~~~g~~~~v~I~Yd~~~~~l~V~l~~~~--~~~~~~ls~~vdL~~~l~~~vyvGFSAsTG~~~~~~  213 (228)
T d1ioaa_         147 -----------DFHKYNGEKTDVQITYDSSNNDLRVFLHFTV--SQVKCSVSATVHLEKEVDEWVSVGFSPTSGLTEDTT  213 (228)
T ss_dssp             -----------CHHHHCSSCEEEEEEEETTTTEEEEEEEETT--TCCEEEEEEECCGGGTSCSEEEEEEEEEECSSTTTC
T ss_pred             -----------ccccccCcEEEEEEEEcCCCCEEEEEEEeCC--CCceeeEEEEEchHHcCCCcEEEEEEeecCCCCCCc
Confidence                       2356799999999999999999999998754  677889999999999999999999999999   456


Q ss_pred             ceeeecceeeeec
Q 048419          236 ASHNVHGWSISIG  248 (653)
Q Consensus       236 ~~~~i~sWsf~~~  248 (653)
                      |.|+|++|+|++.
T Consensus       214 ~~h~I~sWsFss~  226 (228)
T d1ioaa_         214 ETHDVLSWSFSSK  226 (228)
T ss_dssp             BCCEEEEEEEEEE
T ss_pred             eEEEEEEEEeEEe
Confidence            8999999999863

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=8.6e-48  Score=396.50  Aligned_cols=261  Identities=23%  Similarity=0.358  Sum_probs=210.4

Q ss_pred             hhcCcCcceeeeeeCcEEEEEEEeCC-----CCcEEEEEEeccCc-hhhHHHHHHHHHHHhhcCCCceeeeeeeecccce
Q 048419          328 VTKGFGEQNLVGSGGFGRVYRGLMPS-----LGLEVAIKRIGHNS-QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDE  401 (653)
Q Consensus       328 at~~f~~~~~LG~G~fg~Vy~~~~~~-----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~  401 (653)
                      -.++|+..+.||+|+||+||+|+..+     +++.||||++.... .+..+.|.+|++++++++||||++++++|.+.+.
T Consensus        11 p~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~   90 (301)
T d1lufa_          11 PRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKP   90 (301)
T ss_dssp             CGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS
T ss_pred             CHHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceeeeccCCc
Confidence            45679999999999999999999753     46789999997543 3446789999999999999999999999999999


Q ss_pred             eEEEEeccCCCCchhhhhcccc-------------------cccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCC
Q 048419          402 LLLVYDYVPNGSLDKLLFDKDH-------------------KLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVK  462 (653)
Q Consensus       402 ~~lV~E~~~~gsL~~~l~~~~~-------------------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlk  462 (653)
                      .++||||+++|+|.+++.....                   .....+++.+++.++.|++.||+|||+   ++|+|||||
T Consensus        91 ~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~---~~ivHrDlK  167 (301)
T d1lufa_          91 MCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSE---RKFVHRDLA  167 (301)
T ss_dssp             CEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCS
T ss_pred             eEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhccc---CCeEeeEEc
Confidence            9999999999999999975321                   112348899999999999999999999   999999999


Q ss_pred             CCcEEEcCCCcEEEEeecCcccccCCCC-CcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCC-CCCChhh
Q 048419          463 PSNILLDTYLNAKLGDFGLAKIYEHGAN-PQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGR-RSIEPQK  540 (653)
Q Consensus       463 p~NIll~~~~~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~-~p~~~~~  540 (653)
                      |+||||+.++++||+|||+++....... .......|++.|+|||.+.+..++.++|||||||++|||++|. .||....
T Consensus       168 p~NILld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~~~~~  247 (301)
T d1lufa_         168 TRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMA  247 (301)
T ss_dssp             GGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC
T ss_pred             ccceEECCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCCCCCCC
Confidence            9999999999999999999986543322 2233457889999999999999999999999999999999996 5666544


Q ss_pred             hhhHHHHHHHHHhhhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          541 AAAELLLVDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       541 ~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                      ..+   +...+..    +...        ..+...+.++.+|+.+||+.||.+||||.||+++|+.
T Consensus       248 ~~e---~~~~v~~----~~~~--------~~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~~L~~  298 (301)
T d1lufa_         248 HEE---VIYYVRD----GNIL--------ACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQR  298 (301)
T ss_dssp             HHH---HHHHHHT----TCCC--------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHH---HHHHHHc----CCCC--------CCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence            322   1122221    1111        1112234578899999999999999999999999975

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.8e-47  Score=395.47  Aligned_cols=254  Identities=25%  Similarity=0.365  Sum_probs=202.2

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCc----EEEEEEeccC-chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGL----EVAIKRIGHN-SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLL  404 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~----~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  404 (653)
                      .+|+..++||+|+||+||+|.+..+|+    .||||++... ..+..++|.+|++++++++|||||+++|+|.+. ..++
T Consensus         9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~-~~~~   87 (317)
T d1xkka_           9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL   87 (317)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESS-SEEE
T ss_pred             HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC-CeeE
Confidence            358889999999999999999877665    5899988643 445678899999999999999999999999875 4678


Q ss_pred             EEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccc
Q 048419          405 VYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKI  484 (653)
Q Consensus       405 V~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~  484 (653)
                      ++||+.+|+|.+++...    ...+++..+++++.|||+||+|||+   ++|+||||||+||||+.++.+||+|||+++.
T Consensus        88 v~e~~~~~~l~~~~~~~----~~~~~~~~~~~i~~qi~~gl~yLH~---~~iiHrDlKp~NIll~~~~~~kl~DFGla~~  160 (317)
T d1xkka_          88 ITQLMPFGCLLDYVREH----KDNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKL  160 (317)
T ss_dssp             EEECCTTCBHHHHHHHT----SSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEETTEEEECCCSHHHH
T ss_pred             EEEeccCCccccccccc----ccCCCHHHHHHHHHHHHHHHHHHHH---cCcccCcchhhcceeCCCCCeEeecccccee
Confidence            88999999999988765    3458999999999999999999999   8999999999999999999999999999997


Q ss_pred             ccCCCCC-cccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhhcccchhH
Q 048419          485 YEHGANP-QTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELHLEGEITQ  562 (653)
Q Consensus       485 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~  562 (653)
                      ....... ......||+.|+|||++.++.++.++|||||||++|||+| |+.||.......   +...+....       
T Consensus       161 ~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~---~~~~i~~~~-------  230 (317)
T d1xkka_         161 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---ISSILEKGE-------  230 (317)
T ss_dssp             TTTTCC--------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGG---HHHHHHHTC-------
T ss_pred             cccccccccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHHH---HHHHHHcCC-------
Confidence            6543332 2334568999999999999999999999999999999998 788887654322   111111110       


Q ss_pred             hhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          563 AIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       563 ~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                          ++ ..+......+.+|+.+||+.||.+|||+.||+++|+.
T Consensus       231 ----~~-~~p~~~~~~~~~li~~cl~~dP~~RPs~~eil~~l~~  269 (317)
T d1xkka_         231 ----RL-PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSK  269 (317)
T ss_dssp             ----CC-CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             ----CC-CCCcccCHHHHHHHHHhCCCChhhCcCHHHHHHHHHH
Confidence                00 1112234678899999999999999999999998864

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-47  Score=385.43  Aligned_cols=248  Identities=30%  Similarity=0.390  Sum_probs=196.6

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecc-cceeEEEEec
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRK-QDELLLVYDY  408 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~-~~~~~lV~E~  408 (653)
                      ++|+..+.||+|+||.||+|.++  |..||||+++..  ...+.|.+|++++++++||||++++|+|.+ .+.+++||||
T Consensus         7 ~~~~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~i~~~--~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~ey   82 (262)
T d1byga_           7 KELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY   82 (262)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEET--TEEEEEEECCCC--C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECC
T ss_pred             HHeEEeEEEecCCCeEEEEEEEC--CeEEEEEEECcH--HHHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEEEec
Confidence            35677899999999999999985  688999999643  345789999999999999999999999865 4568999999


Q ss_pred             cCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCC
Q 048419          409 VPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHG  488 (653)
Q Consensus       409 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~  488 (653)
                      +++|+|.++|....   ...++|..+++|+.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+++.....
T Consensus        83 ~~~g~L~~~l~~~~---~~~l~~~~~~~i~~~i~~al~ylH~---~~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~~  156 (262)
T d1byga_          83 MAKGSLVDYLRSRG---RSVLGGDCLLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST  156 (262)
T ss_dssp             CTTEEHHHHHHHHH---HHHCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTSCEEECCCCC-------
T ss_pred             cCCCCHHHHHHhcC---CCCCCHHHHHHHHHHHHhhcccccc---CceeccccchHhheecCCCCEeecccccceecCCC
Confidence            99999999997653   3468999999999999999999999   89999999999999999999999999999865432


Q ss_pred             CCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhhc
Q 048419          489 ANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQT  567 (653)
Q Consensus       489 ~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~  567 (653)
                          .....++..|+|||++.+..++.++|||||||++|||+| |+.|+......+   +.+++..    +..       
T Consensus       157 ----~~~~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~---~~~~i~~----~~~-------  218 (262)
T d1byga_         157 ----QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD---VVPRVEK----GYK-------  218 (262)
T ss_dssp             ---------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGG---HHHHHTT----TCC-------
T ss_pred             ----CccccccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHHH---HHHHHHc----CCC-------
Confidence                233467899999999999999999999999999999998 677776543321   2222211    110       


Q ss_pred             cCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          568 LDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       568 l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                       ...+......+.+|+.+||+.||.+||||.+|+++|+.
T Consensus       219 -~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~l~~~L~~  256 (262)
T d1byga_         219 -MDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEH  256 (262)
T ss_dssp             -CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             -CCCCccCCHHHHHHHHHHcccCHhHCcCHHHHHHHHHH
Confidence             11122234678899999999999999999999999863

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=3.2e-46  Score=391.82  Aligned_cols=247  Identities=21%  Similarity=0.257  Sum_probs=208.8

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC---chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN---SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVY  406 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  406 (653)
                      ++|+..+.||+|+||.||+|++..+|+.||||++...   .....+.+.+|+.+|++++|||||++++++.+.+.+++||
T Consensus        41 d~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~v~  120 (350)
T d1rdqe_          41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM  120 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeeccccccccccccccc
Confidence            5799999999999999999999999999999998643   2334567899999999999999999999999999999999


Q ss_pred             eccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccccc
Q 048419          407 DYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYE  486 (653)
Q Consensus       407 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~  486 (653)
                      ||+.+|+|..++...     ..+++.+++.++.||+.||.|||+   ++|+||||||+||||+.++.+||+|||+++...
T Consensus       121 e~~~~g~l~~~l~~~-----~~l~e~~~~~i~~qi~~aL~yLH~---~~iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~  192 (350)
T d1rdqe_         121 EYVAGGEMFSHLRRI-----GRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK  192 (350)
T ss_dssp             ECCTTCBHHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECS
T ss_pred             ccccccchhhhHhhc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCEecCcCCHHHcccCCCCCEEeeeceeeeecc
Confidence            999999999999764     348999999999999999999999   999999999999999999999999999999765


Q ss_pred             CCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhh
Q 048419          487 HGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQ  566 (653)
Q Consensus       487 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  566 (653)
                      ..    .....||+.|+|||++.+..++.++|||||||++|||+||+.||.......   +...+...    .       
T Consensus       193 ~~----~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~---~~~~i~~~----~-------  254 (350)
T d1rdqe_         193 GR----TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ---IYEKIVSG----K-------  254 (350)
T ss_dssp             SC----BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHHHHHHC----C-------
T ss_pred             cc----cccccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcCHHH---HHHHHhcC----C-------
Confidence            32    234679999999999999999999999999999999999999998654322   11111110    0       


Q ss_pred             ccCcCCHHHHHHHHHHHHHcCCCCCCCC-----CCHHHHHHHH
Q 048419          567 TLDYYDLAEAELVLNLGLFCSAPNPVYR-----PDMRRVVEFL  604 (653)
Q Consensus       567 ~l~~~~~~~~~~l~~l~~~Cl~~dP~~R-----Ps~~evl~~L  604 (653)
                       . ..+......+.+++.+||+.||.+|     ||+.|++++-
T Consensus       255 -~-~~p~~~s~~~~~li~~~L~~dP~kR~~~~r~t~~ell~Hp  295 (350)
T d1rdqe_         255 -V-RFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHK  295 (350)
T ss_dssp             -C-CCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSG
T ss_pred             -C-CCCccCCHHHHHHHHHHhhhCHHhccccccccHHHHHcCc
Confidence             0 0111234568899999999999999     4999999743

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=2.3e-46  Score=381.18  Aligned_cols=257  Identities=24%  Similarity=0.331  Sum_probs=203.0

Q ss_pred             hcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC---chhhHHHHHHHHHHHhhcCCCceeeeeeeecccc----e
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN---SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQD----E  401 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~----~  401 (653)
                      .++|+..+.||+|+||.||+|.+..+|+.||||++...   ..+..+.+.+|++++++++||||+++++++...+    .
T Consensus         6 ~drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~   85 (277)
T d1o6ya_           6 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL   85 (277)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEE
T ss_pred             cceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCce
Confidence            46799999999999999999999989999999999654   3344567999999999999999999999987654    3


Q ss_pred             eEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecC
Q 048419          402 LLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGL  481 (653)
Q Consensus       402 ~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl  481 (653)
                      +|||||||++++|.+++...     ..+++.+++.++.||++||+|||+   ++|+||||||+|||++.++..+|+|||.
T Consensus        86 ~~lvmE~~~g~~L~~~~~~~-----~~l~~~~~~~i~~qi~~al~~lH~---~~iiHrDiKP~NIll~~~~~~~l~d~~~  157 (277)
T d1o6ya_          86 PYIVMEYVDGVTLRDIVHTE-----GPMTPKRAIEVIADACQALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDFGI  157 (277)
T ss_dssp             EEEEEECCCEEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTSCEEECCCTT
T ss_pred             EEEEEECCCCCEehhhhccc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCccCccccCcccccCccccceeehhhh
Confidence            79999999999999988654     358999999999999999999999   9999999999999999999999999999


Q ss_pred             cccccCCCC--CcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccc
Q 048419          482 AKIYEHGAN--PQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGE  559 (653)
Q Consensus       482 a~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~  559 (653)
                      +........  .......||+.|+|||++.+..++.++|||||||++|||+||+.||......+.  +...+..   ...
T Consensus       158 ~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~--~~~~~~~---~~~  232 (277)
T d1o6ya_         158 ARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSV--AYQHVRE---DPI  232 (277)
T ss_dssp             CEECC----------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH--HHHHHHC---CCC
T ss_pred             hhhhccccccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcCHHHH--HHHHHhc---CCC
Confidence            876543322  233446799999999999998999999999999999999999999986543321  1111111   111


Q ss_pred             hhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCC-CHHHHHHHHc
Q 048419          560 ITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRP-DMRRVVEFLL  605 (653)
Q Consensus       560 ~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RP-s~~evl~~L~  605 (653)
                      ......       ...++.+.+++.+||+.||.+|| |++++++.|.
T Consensus       233 ~~~~~~-------~~~s~~l~~li~~~L~~dp~~R~~sa~~l~~~l~  272 (277)
T d1o6ya_         233 PPSARH-------EGLSADLDAVVLKALAKNPENRYQTAAEMRADLV  272 (277)
T ss_dssp             CGGGTS-------SSCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHH
T ss_pred             CCchhc-------cCCCHHHHHHHHHHccCCHhHCHhHHHHHHHHHH
Confidence            111111       11246788999999999999999 8999988774

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=100.00  E-value=2.7e-46  Score=379.79  Aligned_cols=252  Identities=24%  Similarity=0.323  Sum_probs=207.4

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCch---------hhHHHHHHHHHHHhhcC-CCceeeeeeeeccc
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQ---------QGMKEFVAEIMSMGRLR-HRNLVQLHGWCRKQ  399 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~---------~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~  399 (653)
                      ++|+..+.||+|+||+||+|++..+|+.||||++.....         ...+.+.+|+.++++++ ||||+++++++.++
T Consensus         3 ~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~   82 (277)
T d1phka_           3 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETN   82 (277)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECS
T ss_pred             ccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecccC
Confidence            678899999999999999999998999999999865421         12346889999999997 99999999999999


Q ss_pred             ceeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEee
Q 048419          400 DELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDF  479 (653)
Q Consensus       400 ~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df  479 (653)
                      +..|||||||++|+|.++|...     ..+++.+++.++.||++||+|||+   ++|+||||||+|||++.++.+||+||
T Consensus        83 ~~~~ivmE~~~~g~L~~~l~~~-----~~l~e~~~~~~~~qi~~al~~lH~---~~ivHrDlkp~Nill~~~~~~kl~DF  154 (277)
T d1phka_          83 TFFFLVFDLMKKGELFDYLTEK-----VTLSEKETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDF  154 (277)
T ss_dssp             SEEEEEEECCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCC
T ss_pred             cceEEEEEcCCCchHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---cCCcccccccceEEEcCCCCeEEccc
Confidence            9999999999999999999754     358999999999999999999999   99999999999999999999999999


Q ss_pred             cCcccccCCCCCcccccccCCcccCcccccc------CCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHh
Q 048419          480 GLAKIYEHGANPQTTHIVGTLGYLAPELTRT------GKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKE  553 (653)
Q Consensus       480 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~  553 (653)
                      |+++......  ......||+.|+|||.+.+      ..++.++||||+||++|||++|+.||........   ...+..
T Consensus       155 G~a~~~~~~~--~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~~---~~~i~~  229 (277)
T d1phka_         155 GFSCQLDPGE--KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLM---LRMIMS  229 (277)
T ss_dssp             TTCEECCTTC--CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH---HHHHHH
T ss_pred             hheeEccCCC--ceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHHHH---HHHHHh
Confidence            9999765432  2344679999999998853      3468899999999999999999999987654321   111111


Q ss_pred             hhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 048419          554 LHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEF  603 (653)
Q Consensus       554 ~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  603 (653)
                      ..  .....   +    .....++.+.+|+.+||+.||.+|||+.||+++
T Consensus       230 ~~--~~~~~---~----~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~h  270 (277)
T d1phka_         230 GN--YQFGS---P----EWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAH  270 (277)
T ss_dssp             TC--CCCCT---T----TGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred             CC--CCCCC---c----ccccCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence            00  00000   0    011234678899999999999999999999876

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.9e-46  Score=386.16  Aligned_cols=251  Identities=24%  Similarity=0.392  Sum_probs=201.9

Q ss_pred             ceeeeeeCcEEEEEEEeCCCC---cEEEEEEecc-CchhhHHHHHHHHHHHhhcCCCceeeeeeeecc-cceeEEEEecc
Q 048419          335 QNLVGSGGFGRVYRGLMPSLG---LEVAIKRIGH-NSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRK-QDELLLVYDYV  409 (653)
Q Consensus       335 ~~~LG~G~fg~Vy~~~~~~~~---~~vavK~~~~-~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~-~~~~~lV~E~~  409 (653)
                      .++||+|+||+||+|.+..++   ..||||+++. ......++|.+|+++|++++||||++++|+|.+ ++..++|||||
T Consensus        32 ~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E~~  111 (311)
T d1r0pa_          32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM  111 (311)
T ss_dssp             EEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEECC
T ss_pred             ceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEEEEe
Confidence            568999999999999986543   3699999975 355567889999999999999999999999875 45789999999


Q ss_pred             CCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCC
Q 048419          410 PNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGA  489 (653)
Q Consensus       410 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~  489 (653)
                      ++|+|.+++....    ..+++..+++++.|+++||.|||+   ++|+||||||+||||++++.+||+|||+++......
T Consensus       112 ~~g~l~~~~~~~~----~~~~~~~~~~i~~qia~gL~~lH~---~~iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~  184 (311)
T d1r0pa_         112 KHGDLRNFIRNET----HNPTVKDLIGFGLQVAKGMKFLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE  184 (311)
T ss_dssp             TTCBHHHHHHCTT----CCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTT
T ss_pred             ecCchhhhhcccc----ccchHHHHHHHHHHHHHhhhhhcc---cCcccCCccHHhEeECCCCCEEEecccchhhccccc
Confidence            9999999987653    457888999999999999999999   999999999999999999999999999998765432


Q ss_pred             CC---cccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhh
Q 048419          490 NP---QTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQ  566 (653)
Q Consensus       490 ~~---~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  566 (653)
                      ..   ......||+.|+|||.+.+..++.++||||||+++|||+||+.|+.......  .+..++..    +..      
T Consensus       185 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~--~~~~~i~~----g~~------  252 (311)
T d1r0pa_         185 FDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF--DITVYLLQ----GRR------  252 (311)
T ss_dssp             CCCTTCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC--------CHHHHHT----TCC------
T ss_pred             cccceecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCHH--HHHHHHHc----CCC------
Confidence            22   2234578999999999999999999999999999999999888876533211  11122211    110      


Q ss_pred             ccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          567 TLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       567 ~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                       + ..+....+.+.+|+.+||+.||++||+|.||+++|+.
T Consensus       253 -~-~~p~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~L~~  290 (311)
T d1r0pa_         253 -L-LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISA  290 (311)
T ss_dssp             -C-CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             -C-CCcccCcHHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence             0 0111224578899999999999999999999999965

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.3e-47  Score=390.88  Aligned_cols=257  Identities=27%  Similarity=0.399  Sum_probs=204.5

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCc--EEEEEEeccC-chhhHHHHHHHHHHHhhc-CCCceeeeeeeecccceeEEE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGL--EVAIKRIGHN-SQQGMKEFVAEIMSMGRL-RHRNLVQLHGWCRKQDELLLV  405 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~--~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV  405 (653)
                      ++|+..++||+|+||.||+|++..+|.  .||||++... ..+..+.|.+|+++|+++ +|||||+++|+|.+.+.+++|
T Consensus        10 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~iV   89 (309)
T d1fvra_          10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA   89 (309)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred             HHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeEEE
Confidence            567888999999999999999987776  4778887543 444567899999999999 799999999999999999999


Q ss_pred             EeccCCCCchhhhhcccc-----------cccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcE
Q 048419          406 YDYVPNGSLDKLLFDKDH-----------KLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNA  474 (653)
Q Consensus       406 ~E~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~  474 (653)
                      |||+++|+|.++|+....           .....++|.++++++.|||+||.|||+   ++|+||||||+|||++.++.+
T Consensus        90 ~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~---~~iiHrDlkp~NIL~~~~~~~  166 (309)
T d1fvra_          90 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVA  166 (309)
T ss_dssp             ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECGGGCE
T ss_pred             EEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhc---CCccccccccceEEEcCCCce
Confidence            999999999999976521           123568999999999999999999999   899999999999999999999


Q ss_pred             EEEeecCcccccCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCC-CCChhhhhhHHHHHHHHHh
Q 048419          475 KLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRR-SIEPQKAAAELLLVDWVKE  553 (653)
Q Consensus       475 kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~-p~~~~~~~~~~~l~~~~~~  553 (653)
                      ||+|||+++......  ......||..|+|||.+.+..++.++|||||||++|||++|.. ||.......   +.+.+..
T Consensus       167 kl~DfG~a~~~~~~~--~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~~~---~~~~i~~  241 (309)
T d1fvra_         167 KIADFGLSRGQEVYV--KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE---LYEKLPQ  241 (309)
T ss_dssp             EECCTTCEESSCEEC--CC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH---HHHHGGG
T ss_pred             EEccccccccccccc--cccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCCCHHH---HHHHHHh
Confidence            999999998654322  2233468999999999999999999999999999999999765 565443221   1111111


Q ss_pred             hhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          554 LHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       554 ~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                          +.       + ...+....+.+.+|+.+||+.||++||||.||+++|+.
T Consensus       242 ----~~-------~-~~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~L~~  282 (309)
T d1fvra_         242 ----GY-------R-LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNR  282 (309)
T ss_dssp             ----TC-------C-CCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             ----cC-------C-CCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence                10       0 01112234678999999999999999999999998865

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.2e-46  Score=388.44  Aligned_cols=248  Identities=23%  Similarity=0.328  Sum_probs=205.7

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC---chhhHHHHHHHHHHHh-hcCCCceeeeeeeecccceeEEE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN---SQQGMKEFVAEIMSMG-RLRHRNLVQLHGWCRKQDELLLV  405 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~-~l~H~niv~l~g~~~~~~~~~lV  405 (653)
                      ++|...+.||+|+||+||+|++..+|+.||||++.+.   ..+..+.+..|..++. .++|||||++++++.+.+.+|+|
T Consensus         2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yiv   81 (320)
T d1xjda_           2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV   81 (320)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred             CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEE
Confidence            5788999999999999999999999999999999643   2334566777777665 68999999999999999999999


Q ss_pred             EeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccc
Q 048419          406 YDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIY  485 (653)
Q Consensus       406 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~  485 (653)
                      ||||++|+|.+++....     .+++.+++.++.||+.||+|||+   ++|+||||||+|||+++++++||+|||+++..
T Consensus        82 mEy~~~g~L~~~i~~~~-----~~~e~~~~~~~~qi~~al~ylH~---~~iiHrDikp~NiL~~~~~~~kl~DFG~a~~~  153 (320)
T d1xjda_          82 MEYLNGGDLMYHIQSCH-----KFDLSRATFYAAEIILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCKEN  153 (320)
T ss_dssp             EECCTTCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred             EeecCCCcHHHHhhccC-----CCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCcccceeecCCCceeccccchhhhc
Confidence            99999999999997643     48889999999999999999999   89999999999999999999999999999865


Q ss_pred             cCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhh
Q 048419          486 EHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAID  565 (653)
Q Consensus       486 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d  565 (653)
                      .... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.......   +...+..  ....      
T Consensus       154 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~~---~~~~i~~--~~~~------  221 (320)
T d1xjda_         154 MLGD-AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEE---LFHSIRM--DNPF------  221 (320)
T ss_dssp             CCTT-CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHHHHHH--CCCC------
T ss_pred             cccc-ccccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCHHH---HHHHHHc--CCCC------
Confidence            4332 23344679999999999999999999999999999999999999998654432   1111111  0001      


Q ss_pred             hccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHH-HHHH
Q 048419          566 QTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMR-RVVE  602 (653)
Q Consensus       566 ~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~-evl~  602 (653)
                           ++......+.+|+.+||+.||.+||++. |+++
T Consensus       222 -----~p~~~s~~~~dli~~~L~~dP~~R~s~~~~l~~  254 (320)
T d1xjda_         222 -----YPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQ  254 (320)
T ss_dssp             -----CCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGG
T ss_pred             -----CCccCCHHHHHHHHHhcccCCCCCcCHHHHHHh
Confidence                 1112245688999999999999999995 7764

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.6e-47  Score=383.35  Aligned_cols=255  Identities=25%  Similarity=0.397  Sum_probs=197.6

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCC---CcEEEEEEeccC---chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSL---GLEVAIKRIGHN---SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELL  403 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~---~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~  403 (653)
                      ++|+..+.||+|+||.||+|++...   ...||||++...   ..+..+.|.+|+.+|++++||||++++|+|.+. ..+
T Consensus         8 ~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~~-~~~   86 (273)
T d1u46a_           8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTP-PMK   86 (273)
T ss_dssp             GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS-SCE
T ss_pred             HHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeec-chh
Confidence            4688899999999999999986432   347899998653   344567899999999999999999999999764 678


Q ss_pred             EEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcc
Q 048419          404 LVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK  483 (653)
Q Consensus       404 lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~  483 (653)
                      +|||||++|+|.+++....    ..+++..+++++.|||+||.|||+   ++|+||||||+||||+.++.+||+|||+++
T Consensus        87 lv~e~~~~~~l~~~~~~~~----~~l~~~~~~~~~~qi~~gl~ylH~---~~iiHrDikp~NIll~~~~~vkl~DfGl~~  159 (273)
T d1u46a_          87 MVTELAPLGSLLDRLRKHQ----GHFLLGTLSRYAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMR  159 (273)
T ss_dssp             EEEECCTTCBHHHHHHHHG----GGSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEEEETTEEEECCCTTCE
T ss_pred             eeeeeecCcchhhhhhccc----CCCCHHHHHHHHHHHHHHHHHhhh---CCEeeeeecHHHhccccccceeeccchhhh
Confidence            9999999999999887643    459999999999999999999999   899999999999999999999999999999


Q ss_pred             cccCCCCC--cccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHHHHHHHhhhcccch
Q 048419          484 IYEHGANP--QTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLLVDWVKELHLEGEI  560 (653)
Q Consensus       484 ~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~  560 (653)
                      ........  ......|+..|+|||.+.+..++.++|||||||++|||+| |+.||......+   ...++...   +..
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~---~~~~i~~~---~~~  233 (273)
T d1u46a_         160 ALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQ---ILHKIDKE---GER  233 (273)
T ss_dssp             ECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH---HHHHHHTS---CCC
T ss_pred             hcccCCCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHHH---HHHHHHhC---CCC
Confidence            76544322  2233467889999999999999999999999999999998 899997654432   11222211   100


Q ss_pred             hHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          561 TQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       561 ~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                      .        ......+..+.+|+.+||+.||.+|||+.||++.|+.
T Consensus       234 ~--------~~~~~~~~~l~~li~~cl~~dp~~RPt~~ei~~~L~~  271 (273)
T d1u46a_         234 L--------PRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLE  271 (273)
T ss_dssp             C--------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             C--------CCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHh
Confidence            0        0111223568899999999999999999999999863

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-46  Score=385.65  Aligned_cols=260  Identities=24%  Similarity=0.342  Sum_probs=198.2

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCC-----CCcEEEEEEeccC-chhhHHHHHHHHHHHhhc-CCCceeeeeeeeccc-ce
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPS-----LGLEVAIKRIGHN-SQQGMKEFVAEIMSMGRL-RHRNLVQLHGWCRKQ-DE  401 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~-----~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~-~~  401 (653)
                      ++|+..+.||+|+||.||+|.+..     +++.||||++... .....+.+.+|...+.++ +|+||+++++++.+. +.
T Consensus        13 ~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~   92 (299)
T d1ywna1          13 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGP   92 (299)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSC
T ss_pred             HHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccCCCe
Confidence            568889999999999999999643     3468999999654 344567788898888887 689999999998665 46


Q ss_pred             eEEEEeccCCCCchhhhhccccc-----------ccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcC
Q 048419          402 LLLVYDYVPNGSLDKLLFDKDHK-----------LRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDT  470 (653)
Q Consensus       402 ~~lV~E~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~  470 (653)
                      +++|||||++|+|.++|......           ....+++.+++.++.||++||+|||+   ++|+||||||+||||++
T Consensus        93 ~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~---~~ivHrDlKp~NILl~~  169 (299)
T d1ywna1          93 LMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSE  169 (299)
T ss_dssp             CEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECG
T ss_pred             EEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHh---CCCcCCcCCccceeECC
Confidence            89999999999999999765321           13458999999999999999999999   99999999999999999


Q ss_pred             CCcEEEEeecCcccccCCCC-CcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCC-CCCChhhhhhHHHHH
Q 048419          471 YLNAKLGDFGLAKIYEHGAN-PQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGR-RSIEPQKAAAELLLV  548 (653)
Q Consensus       471 ~~~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~-~p~~~~~~~~~~~l~  548 (653)
                      ++++||+|||+++....... .......||+.|+|||.+.+..++.++|||||||++|||+||. .||........  +.
T Consensus       170 ~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~~~--~~  247 (299)
T d1ywna1         170 KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE--FC  247 (299)
T ss_dssp             GGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHH--HH
T ss_pred             CCcEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCCHHHH--HH
Confidence            99999999999987654332 2334467999999999999999999999999999999999975 56654332211  11


Q ss_pred             HHHHhhhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          549 DWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       549 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                      ..+..    +...        ..+....+.+.+++.+||+.||.+|||+.||+++|+.
T Consensus       248 ~~~~~----~~~~--------~~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~L~~  293 (299)
T d1ywna1         248 RRLKE----GTRM--------RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGN  293 (299)
T ss_dssp             HHHHH----TCCC--------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHhc----CCCC--------CCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence            11111    1100        1111234568899999999999999999999999864

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=7.4e-46  Score=391.12  Aligned_cols=250  Identities=23%  Similarity=0.263  Sum_probs=201.6

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc---hhhHHHHH---HHHHHHhhcCCCceeeeeeeecccceeE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS---QQGMKEFV---AEIMSMGRLRHRNLVQLHGWCRKQDELL  403 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~---~E~~~l~~l~H~niv~l~g~~~~~~~~~  403 (653)
                      ++|+..++||+|+||.||+|++..+|+.||||++....   .+....+.   .|+.+++.++|||||++++++.+.+.+|
T Consensus         4 ddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~~~   83 (364)
T d1omwa3           4 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS   83 (364)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred             HhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCEEE
Confidence            57899999999999999999999999999999985431   12223333   4467778888999999999999999999


Q ss_pred             EEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcc
Q 048419          404 LVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAK  483 (653)
Q Consensus       404 lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~  483 (653)
                      +|||||++|+|.++|...     ..+++.+++.++.||+.||.|||+   ++|+||||||+||||+.++.+||+|||+++
T Consensus        84 ivmE~~~gg~L~~~l~~~-----~~~~e~~~~~~~~qi~~aL~ylH~---~~iiHrDlKP~NILl~~~g~iKl~DFGla~  155 (364)
T d1omwa3          84 FILDLMNGGDLHYHLSQH-----GVFSEADMRFYAAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLAC  155 (364)
T ss_dssp             EEECCCCSCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECSSSCEEECCCTTCE
T ss_pred             EEEEecCCCcHHHHHHhc-----ccccHHHHHHHHHHHHHHHHHHHH---CCccceeeccceeEEcCCCcEEEeeeceee
Confidence            999999999999999764     347889999999999999999999   999999999999999999999999999998


Q ss_pred             cccCCCCCcccccccCCcccCcccccc-CCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhH
Q 048419          484 IYEHGANPQTTHIVGTLGYLAPELTRT-GKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQ  562 (653)
Q Consensus       484 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~  562 (653)
                      .....   ......||+.|+|||++.. ..++.++|||||||++|||+||+.||..........+.   .. ....    
T Consensus       156 ~~~~~---~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~---~~-~~~~----  224 (364)
T d1omwa3         156 DFSKK---KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEID---RM-TLTM----  224 (364)
T ss_dssp             ECSSS---CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHHHH---HH-SSSC----
T ss_pred             ecCCC---cccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHHHHH---Hh-cccC----
Confidence            76543   2344579999999999865 46899999999999999999999999764432211110   00 0000    


Q ss_pred             hhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCC-----HHHHHHH
Q 048419          563 AIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPD-----MRRVVEF  603 (653)
Q Consensus       563 ~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs-----~~evl~~  603 (653)
                           ....+....+.+.+|+.+||+.||.+|||     +.|++++
T Consensus       225 -----~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~H  265 (364)
T d1omwa3         225 -----AVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKES  265 (364)
T ss_dssp             -----CCCCCSSSCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHTS
T ss_pred             -----CCCCCCCCCHHHHHHHHHHcccCHHHhCCCcccCHHHHHcC
Confidence                 00111123456889999999999999999     6888864

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.8e-46  Score=386.97  Aligned_cols=253  Identities=18%  Similarity=0.243  Sum_probs=209.1

Q ss_pred             hcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEec
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDY  408 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~  408 (653)
                      -++|...+.||+|+||+||+|.+..+++.||||+++.... ....+.+|+++|++++|||||++++++.+.+.+|+||||
T Consensus         4 ~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~~-~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvmE~   82 (321)
T d1tkia_           4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGT-DQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF   82 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTH-HHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCcc-cHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEec
Confidence            4678999999999999999999999999999999976543 345688999999999999999999999999999999999


Q ss_pred             cCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcC--CCcEEEEeecCccccc
Q 048419          409 VPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDT--YLNAKLGDFGLAKIYE  486 (653)
Q Consensus       409 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~--~~~~kl~DfGla~~~~  486 (653)
                      |++|+|.+++....    ..+++.+++.++.||++||+|||+   ++|+||||||+|||++.  ...+||+|||+++...
T Consensus        83 ~~gg~L~~~i~~~~----~~l~e~~~~~i~~qi~~al~yLH~---~~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~  155 (321)
T d1tkia_          83 ISGLDIFERINTSA----FELNEREIVSYVHQVCEALQFLHS---HNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLK  155 (321)
T ss_dssp             CCCCBHHHHHTSSS----CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSCCCEEECCCTTCEECC
T ss_pred             CCCCcHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHH---cCCCcccccccceeecCCCceEEEEcccchhhccc
Confidence            99999999997643    348999999999999999999999   99999999999999975  4589999999998764


Q ss_pred             CCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccchhHhhhh
Q 048419          487 HGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEITQAIDQ  566 (653)
Q Consensus       487 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  566 (653)
                      ..  .......+|+.|+|||.+.+..++.++||||+||++|||++|+.||......+.   ...+...  .........+
T Consensus       156 ~~--~~~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~~---~~~i~~~--~~~~~~~~~~  228 (321)
T d1tkia_         156 PG--DNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQI---IENIMNA--EYTFDEEAFK  228 (321)
T ss_dssp             TT--CEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHH---HHHHHHT--CCCCCHHHHT
T ss_pred             cC--CcccccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCHHHH---HHHHHhC--CCCCChhhcc
Confidence            32  233446789999999999999999999999999999999999999986554321   1111110  0111111111


Q ss_pred             ccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 048419          567 TLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEF  603 (653)
Q Consensus       567 ~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  603 (653)
                      .       ....+.+|+.+||+.||.+|||+.|++++
T Consensus       229 ~-------~s~~~~~li~~~L~~dp~~R~s~~eil~h  258 (321)
T d1tkia_         229 E-------ISIEAMDFVDRLLVKERKSRMTASEALQH  258 (321)
T ss_dssp             T-------SCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             C-------CCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            1       13568899999999999999999999985

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-45  Score=380.39  Aligned_cols=259  Identities=25%  Similarity=0.301  Sum_probs=199.3

Q ss_pred             ceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchh-----hHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEecc
Q 048419          335 QNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQ-----GMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYDYV  409 (653)
Q Consensus       335 ~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~  409 (653)
                      .++||+|+||+||+|++..+|+.||||+++.....     ..+.+.+|+.++++++|||||++++++.+++.+++||||+
T Consensus         3 l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~~   82 (299)
T d1ua2a_           3 LDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFM   82 (299)
T ss_dssp             EEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEECC
T ss_pred             ceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhhhh
Confidence            57899999999999999999999999998654322     1346889999999999999999999999999999999999


Q ss_pred             CCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccCCC
Q 048419          410 PNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEHGA  489 (653)
Q Consensus       410 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~  489 (653)
                      +++++..++..     ...+++.++..++.||+.||+|||+   ++|+||||||+|||+++++.+||+|||+++......
T Consensus        83 ~~~~~~~~~~~-----~~~l~~~~~~~~~~qil~aL~~lH~---~~iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~  154 (299)
T d1ua2a_          83 ETDLEVIIKDN-----SLVLTPSHIKAYMLMTLQGLEYLHQ---HWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPN  154 (299)
T ss_dssp             SEEHHHHHTTC-----CSSCCSSHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCC
T ss_pred             cchHHhhhhhc-----ccCCCHHHHHHHHHHHHHHHHHhhc---cceecccCCcceEEecCCCccccccCccccccCCCc
Confidence            98877766543     2458899999999999999999999   999999999999999999999999999998765432


Q ss_pred             CCcccccccCCcccCccccccC-CCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhc--ccchhHhh--
Q 048419          490 NPQTTHIVGTLGYLAPELTRTG-KATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHL--EGEITQAI--  564 (653)
Q Consensus       490 ~~~~~~~~gt~~y~aPE~~~~~-~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~--  564 (653)
                      . ......||+.|+|||++... .++.++|||||||++|||++|+.||......+...  ........  ........  
T Consensus       155 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~--~i~~~~~~~~~~~~~~~~~~  231 (299)
T d1ua2a_         155 R-AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLT--RIFETLGTPTEEQWPDMCSL  231 (299)
T ss_dssp             C-CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH--HHHHHHCCCCTTTSSSTTSS
T ss_pred             c-cccceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHHHHH--HHHHhcCCCChhhccchhcc
Confidence            2 22345799999999998654 57999999999999999999999997655433221  11111000  00000000  


Q ss_pred             -h----hccCcCCH-----HHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          565 -D----QTLDYYDL-----AEAELVLNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       565 -d----~~l~~~~~-----~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                       .    ......+.     ...+.+.+|+.+||+.||.+|||+.|++++-
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~Hp  281 (299)
T d1ua2a_         232 PDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMK  281 (299)
T ss_dssp             TTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSG
T ss_pred             chhhhhccCCCCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhCCH
Confidence             0    00001111     1236789999999999999999999999864

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.5e-46  Score=385.45  Aligned_cols=261  Identities=22%  Similarity=0.358  Sum_probs=210.8

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCC-----CCcEEEEEEeccC-chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPS-----LGLEVAIKRIGHN-SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELL  403 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~-----~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~  403 (653)
                      ++|...+.||+|+||+||+|.+..     .++.||||+++.. ..+....|.+|++++++++||||++++++|...+..+
T Consensus        20 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~   99 (308)
T d1p4oa_          20 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTL   99 (308)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCE
T ss_pred             HHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEEecCCcee
Confidence            567778999999999999998752     3578999999754 4445567999999999999999999999999999999


Q ss_pred             EEEeccCCCCchhhhhccccc-----ccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEe
Q 048419          404 LVYDYVPNGSLDKLLFDKDHK-----LRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGD  478 (653)
Q Consensus       404 lV~E~~~~gsL~~~l~~~~~~-----~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D  478 (653)
                      +|||||++|+|.+++......     ....+++.++.+++.|+|+||.|||+   ++|+||||||+||||++++++||+|
T Consensus       100 lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~---~~ivHrDlk~~NiLld~~~~~Kl~D  176 (308)
T d1p4oa_         100 VIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGD  176 (308)
T ss_dssp             EEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCSGGGEEECTTCCEEECC
T ss_pred             EEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhh---CCeeeceEcCCceeecCCceEEEee
Confidence            999999999999998764321     12346889999999999999999999   8999999999999999999999999


Q ss_pred             ecCcccccCCCC-CcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCC-CCCChhhhhhHHHHHHHHHhhhc
Q 048419          479 FGLAKIYEHGAN-PQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGR-RSIEPQKAAAELLLVDWVKELHL  556 (653)
Q Consensus       479 fGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~-~p~~~~~~~~~~~l~~~~~~~~~  556 (653)
                      ||+++....... .......||+.|+|||.+.+..++.++|||||||++|||+||+ .|+........   ...+.    
T Consensus       177 FGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~~~---~~~i~----  249 (308)
T d1p4oa_         177 FGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQV---LRFVM----  249 (308)
T ss_dssp             TTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHH---HHHHH----
T ss_pred             cccceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCCCHHHH---HHHHH----
Confidence            999987644322 2233446899999999999999999999999999999999985 66654433221   11111    


Q ss_pred             ccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcCCC
Q 048419          557 EGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLGDS  608 (653)
Q Consensus       557 ~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  608 (653)
                      .+...        ..+......+.+|+.+||+.||.+||||.||+++|+...
T Consensus       250 ~~~~~--------~~p~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~~  293 (308)
T d1p4oa_         250 EGGLL--------DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEM  293 (308)
T ss_dssp             TTCCC--------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGS
T ss_pred             hCCCC--------CCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhc
Confidence            11111        111123467999999999999999999999999998753

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.5e-46  Score=382.43  Aligned_cols=259  Identities=24%  Similarity=0.366  Sum_probs=205.9

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCC-------cEEEEEEeccCc-hhhHHHHHHHHHHHhhc-CCCceeeeeeeecccc
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLG-------LEVAIKRIGHNS-QQGMKEFVAEIMSMGRL-RHRNLVQLHGWCRKQD  400 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~-------~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~  400 (653)
                      ++|...+.||+|+||.||+|+....+       ..||||++.... .....++.+|...+.++ +|||||+++++|.+.+
T Consensus        13 ~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~~~   92 (299)
T d1fgka_          13 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG   92 (299)
T ss_dssp             GGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             HHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEecccccccCC
Confidence            46777899999999999999875433       479999997653 34567899999999998 8999999999999999


Q ss_pred             eeEEEEeccCCCCchhhhhccccc-----------ccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEc
Q 048419          401 ELLLVYDYVPNGSLDKLLFDKDHK-----------LRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLD  469 (653)
Q Consensus       401 ~~~lV~E~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~  469 (653)
                      ..++|||||++|+|.++|......           ....+++.++++++.||++||+|||+   ++|+||||||+|||++
T Consensus        93 ~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~---~~ivHrDiKp~NiLl~  169 (299)
T d1fgka_          93 PLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVLVT  169 (299)
T ss_dssp             SCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEC
T ss_pred             eEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhh---CCEEeeeecccceeec
Confidence            999999999999999999765321           13458999999999999999999999   9999999999999999


Q ss_pred             CCCcEEEEeecCcccccCCCC-CcccccccCCcccCccccccCCCCCccceeehHHHHHHHHh-CCCCCChhhhhhHHHH
Q 048419          470 TYLNAKLGDFGLAKIYEHGAN-PQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVAC-GRRSIEPQKAAAELLL  547 (653)
Q Consensus       470 ~~~~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~ellt-G~~p~~~~~~~~~~~l  547 (653)
                      .++.+||+|||+++....... .......|++.|+|||.+.++.++.++|||||||++|||++ |+.||.......   +
T Consensus       170 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~~~---~  246 (299)
T d1fgka_         170 EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE---L  246 (299)
T ss_dssp             TTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH---H
T ss_pred             CCCCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCCCHHH---H
Confidence            999999999999997755432 23344578999999999999999999999999999999998 677876544321   1


Q ss_pred             HHHHHhhhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          548 VDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       548 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                      .+.+..    +...        ..+......+.+|+.+||+.||.+|||+.||++.|+.
T Consensus       247 ~~~i~~----~~~~--------~~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~~L~~  293 (299)
T d1fgka_         247 FKLLKE----GHRM--------DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR  293 (299)
T ss_dssp             HHHHHT----TCCC--------CCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHHHc----CCCC--------CCCccchHHHHHHHHHHccCCHhHCcCHHHHHHHHHH
Confidence            122211    1100        1111234678999999999999999999999999964

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.4e-46  Score=386.92  Aligned_cols=265  Identities=23%  Similarity=0.274  Sum_probs=205.8

Q ss_pred             hcCcCcc-eeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhc-CCCceeeeeeeecc----ccee
Q 048419          329 TKGFGEQ-NLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRL-RHRNLVQLHGWCRK----QDEL  402 (653)
Q Consensus       329 t~~f~~~-~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~----~~~~  402 (653)
                      -++|.+. ++||+|+||+||+|++..+++.||||+++..     +.+.+|++++.++ +|||||++++++.+    ...+
T Consensus        10 ~~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~-----~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~   84 (335)
T d2ozaa1          10 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL   84 (335)
T ss_dssp             GGTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred             ccCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECCc-----HHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEE
Confidence            3578776 4699999999999999989999999998542     4567899887655 89999999998865    4678


Q ss_pred             EEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcC---CCcEEEEee
Q 048419          403 LLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDT---YLNAKLGDF  479 (653)
Q Consensus       403 ~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~Df  479 (653)
                      |+|||||+||+|.++|....   ...+++.+++.++.||+.||+|||+   ++|+||||||+|||++.   ++.+||+||
T Consensus        85 ~ivmEy~~gg~L~~~i~~~~---~~~l~e~~~~~i~~qi~~al~ylH~---~~iiHRDiKp~NIll~~~~~~~~~Kl~DF  158 (335)
T d2ozaa1          85 LIVMECLDGGELFSRIQDRG---DQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDF  158 (335)
T ss_dssp             EEEEECCCSEEHHHHHHSCS---CCCEEHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCSSTTCCEEECCC
T ss_pred             EEEEECCCCCcHHHHHHhcC---CCCcCHHHHHHHHHHHHHHHHHHHH---cCCcccccccccccccccccccccccccc
Confidence            99999999999999997653   3469999999999999999999999   99999999999999975   567999999


Q ss_pred             cCcccccCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccc
Q 048419          480 GLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGE  559 (653)
Q Consensus       480 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~  559 (653)
                      |+++......  ......||+.|+|||++.+..++.++|||||||++|||+||+.||........   ...+......+.
T Consensus       159 G~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~---~~~~~~~i~~~~  233 (335)
T d2ozaa1         159 GFAKETTSHN--SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI---SPGMKTRIRMGQ  233 (335)
T ss_dssp             TTCEECCCCC--CCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC-----------CCCSCS
T ss_pred             ceeeeccCCC--ccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHH---HHHHHHHHhcCC
Confidence            9998765432  23446799999999999999999999999999999999999999976543211   000111000000


Q ss_pred             hhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH--HcCCCCCCCCC
Q 048419          560 ITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEF--LLGDSSLPPLP  614 (653)
Q Consensus       560 ~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~--L~~~~~~p~~p  614 (653)
                      .. .  +  ........+.+.+|+.+||+.||.+|||+.|++++  +......|..|
T Consensus       234 ~~-~--~--~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~~~~~~~~~  285 (335)
T d2ozaa1         234 YE-F--P--NPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTP  285 (335)
T ss_dssp             SS-C--C--TTHHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHHSHHHHTTTSSCCCE
T ss_pred             CC-C--C--CcccccCCHHHHHHHHHHccCChhHCcCHHHHHcCHHhhCCCCCCCCC
Confidence            00 0  0  00001234678999999999999999999999985  44444454443

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.7e-46  Score=383.14  Aligned_cols=260  Identities=22%  Similarity=0.326  Sum_probs=209.7

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeC-----CCCcEEEEEEeccC-chhhHHHHHHHHHHHhhc-CCCceeeeeeeeccccee
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMP-----SLGLEVAIKRIGHN-SQQGMKEFVAEIMSMGRL-RHRNLVQLHGWCRKQDEL  402 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~-----~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~  402 (653)
                      ++|+..++||+|+||.||+|++.     .+++.||||+++.. .......|.+|+.+++++ +|||||+++++|.+.+..
T Consensus        23 ~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~~~~  102 (311)
T d1t46a_          23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPT  102 (311)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             HHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeCCEE
Confidence            57788999999999999999863     45678999999764 344566799999999999 699999999999999999


Q ss_pred             EEEEeccCCCCchhhhhccccc-------------ccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEc
Q 048419          403 LLVYDYVPNGSLDKLLFDKDHK-------------LRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLD  469 (653)
Q Consensus       403 ~lV~E~~~~gsL~~~l~~~~~~-------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~  469 (653)
                      ++|||||++|+|.+++......             ....+++..+.+++.||++||+|||+   ++++||||||+|||++
T Consensus       103 ~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~---~~ivHrDLKp~NIl~~  179 (311)
T d1t46a_         103 LVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLAS---KNCIHRDLAARNILLT  179 (311)
T ss_dssp             EEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEE
T ss_pred             EEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccccccccccc
Confidence            9999999999999999765321             12358999999999999999999999   9999999999999999


Q ss_pred             CCCcEEEEeecCcccccCCCCC-cccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCC-CChhhhhhHHHH
Q 048419          470 TYLNAKLGDFGLAKIYEHGANP-QTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRS-IEPQKAAAELLL  547 (653)
Q Consensus       470 ~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p-~~~~~~~~~~~l  547 (653)
                      .++.+||+|||+++........ ......||+.|+|||.+.+..++.++|||||||++|||+|++.| +........  +
T Consensus       180 ~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~~~--~  257 (311)
T d1t46a_         180 HGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK--F  257 (311)
T ss_dssp             TTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHH--H
T ss_pred             ccCcccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCCCHHHH--H
Confidence            9999999999999976544332 23446789999999999999999999999999999999995555 443322111  1


Q ss_pred             HHHHHhhhcccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          548 VDWVKELHLEGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       548 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                      .+.+.....            ...+......+.+|+.+||+.||.+||||.||+++|+.
T Consensus       258 ~~~i~~~~~------------~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~~L~~  304 (311)
T d1t46a_         258 YKMIKEGFR------------MLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEK  304 (311)
T ss_dssp             HHHHHHTCC------------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHHhcCCC------------CCCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence            122211110            01111234678999999999999999999999999974

>d1dhkb_ b.29.1.1 (B:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Phytohemagglutinin-L, PHA-L, also arcelin
species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]

Probab=100.00  E-value=7e-45  Score=351.46  Aligned_cols=199  Identities=25%  Similarity=0.428  Sum_probs=166.4

Q ss_pred             cCceeEEeCCCCCCCeEEecceEecCCCcEEecCCCCCceEEEEcCCCeecccCCCCceeeeEEEEEEEEecCCCCCCCC
Q 048419            6 ADTTSFLYNGFLHANLSLEGAAYISTSGILTVTNKSEGLIGHALYPNPLRFKTSNKSVAIDFRTNFVFSILPKYPDLGGQ   85 (653)
Q Consensus         6 ~~~~~f~~~~f~~~~l~~~g~a~~~~~g~l~Lt~~~~~~~Gr~~y~~pi~~~~~~~~~~~sF~t~F~f~i~~~~~~~~gd   85 (653)
                      |.+++|+|++|+..||+|+|||++.++|.|+||++..+++|||+|++||+||++.+++++||+|+|+|.|.+.+...+||
T Consensus         1 a~~~sF~~~~F~~~~l~l~GdA~v~~~g~i~LT~~~~~~~G~~~y~~Pi~l~~~~~~~~~sF~t~F~f~i~~~~~~~~gd   80 (204)
T d1dhkb_           1 ATETSFIIDAFNKTNLILQGDATVSSNGNLQLSYNSYDSMSRAFYSAPIQIRDSTTGNVASFDTNFTMNIRTHRQANSAV   80 (204)
T ss_dssp             CCCCEEEESSCCGGGEEEESSEEECTTSCEEESSSCSSEEEEEEESSCEESEETTTTEECEEEEEEEEEEECCC---CCS
T ss_pred             CccceEECCCCCccCeeEecceEEcCCCeEEeCCCCCCCEEEEEeCCCEeccCCCCcccccEEEEEEEEEecCCCCCCCc
Confidence            46789999999989999999999988899999999999999999999999999999999999999999999887777899


Q ss_pred             ceEEEEecCCCCCCCCCCccccCCCcccCCCCCCCCceEEEEeecccccccCCCCCCeeeEecCCCCcCCcccCccccCC
Q 048419           86 GLAFIIISTNRPENCLANQFLGLPNITMSSSTKFSTRMLAVEFDIIQNTELIDINDNHVGIDISSLISSASEPASYYSGN  165 (653)
Q Consensus        86 GlaF~l~~~~~~~~~~~g~~lG~~~~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~~~Hvgid~ns~~s~~~~~~~~~~~~  165 (653)
                      ||||+|+|....                     ..++.+||||||+.|         |+++|+++...... .       
T Consensus        81 Glaf~~~~~~~~---------------------~~~~~~~vefDt~~n---------~~~~d~~~~~~~~~-~-------  122 (204)
T d1dhkb_          81 GLDFVLVPVQPE---------------------SKGDTVTVEFDTFLS---------RISIDVNNNDIKSV-P-------  122 (204)
T ss_dssp             EEEEEEEEC---------------------------CCEEEEEETTTT---------EEEEEETTEEEEEE-E-------
T ss_pred             eEEEEecCCCCC---------------------CCCcEeeEeeEcccc---------cccCcccccccccc-c-------
Confidence            999999985421                     223569999999886         55555554322111 1       


Q ss_pred             CCccccccCCCCceEEEEEecCCceEEEEEEeeCCCCCCCCCceeeeecCCcccccceEEeEecccCcc---cceeeecc
Q 048419          166 NHRIPILLRSGDPIQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLI---TASHNVHG  242 (653)
Q Consensus       166 ~~~~~~~l~~g~~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~~l~~~~dL~~~l~~~~~vGFsastg~~---~~~~~i~s  242 (653)
                         ..+.+.+|+.++|||+||+.+++|+|++...+  ++..+.|+..+||+.+||++||||||||||..   .|.|+|++
T Consensus       123 ---~~~~~~~g~~~~v~I~Yd~~~~~L~V~l~~~~--~~~~~~l~~~vdL~~~l~~~~yvGFSAaTG~~~~~~e~H~Ils  197 (204)
T d1dhkb_         123 ---WDVHDYDGQNAEVRITYNSSTKVFSVSLSNPS--TGKSNNVSTTVELEKEVYDWVSVGFSATSGAYQWSYETHDVLS  197 (204)
T ss_dssp             ---CCGGGTTTSCEEEEEEEETTTTEEEEEEECTT--TCCEEEEEEECCCCSGGGSEEEEEEEEEECSGGGSCCEEEEEE
T ss_pred             ---cccEecCCCEEEEEEEEcCCCEEEEEEEecCC--CCCceeEEEEecchhccCCcEEEEEEeecCCCCCCceeeEEEE
Confidence               23467899999999999999999999998765  46668899999999999999999999999963   57899999


Q ss_pred             eeeee
Q 048419          243 WSISI  247 (653)
Q Consensus       243 Wsf~~  247 (653)
                      |+|++
T Consensus       198 WsFss  202 (204)
T d1dhkb_         198 WSFSS  202 (204)
T ss_dssp             EEEEE
T ss_pred             EEEEe
Confidence            99985

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-45  Score=379.03  Aligned_cols=263  Identities=26%  Similarity=0.319  Sum_probs=196.7

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeecccc----eeEEE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQD----ELLLV  405 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~----~~~lV  405 (653)
                      +.|...+.||+|+||.||+|++.  |+.||||++..... ....+..|+..+.+++||||++++++|.+.+    .+++|
T Consensus         3 ~~~~l~~~iG~G~fg~Vy~~~~~--g~~vAvK~~~~~~~-~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~lv   79 (303)
T d1vjya_           3 RTIVLQESIGKGRFGEVWRGKWR--GEEVAVKIFSSREE-RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV   79 (303)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEET--TEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred             cEEEEEEEEeeCCCeEEEEEEEC--CEEEEEEEECccch-hHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEEE
Confidence            45667889999999999999974  78999999864322 1222345666677889999999999997654    58999


Q ss_pred             EeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcC-----CCCeEecCCCCCcEEEcCCCcEEEEeec
Q 048419          406 YDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEEC-----NQRVVHRDVKPSNILLDTYLNAKLGDFG  480 (653)
Q Consensus       406 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~-----~~~ivH~Dlkp~NIll~~~~~~kl~DfG  480 (653)
                      ||||++|+|.++|.+.      .++|.++++++.|+|.||+|||+..     .++|+||||||+||||+.++++||+|||
T Consensus        80 ~Ey~~~g~L~~~l~~~------~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DFG  153 (303)
T d1vjya_          80 SDYHEHGSLFDYLNRY------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLG  153 (303)
T ss_dssp             EECCTTCBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCT
T ss_pred             EecccCCCHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEEEecC
Confidence            9999999999999753      3899999999999999999999731     3699999999999999999999999999


Q ss_pred             CcccccCCCCC---cccccccCCcccCccccccCC------CCCccceeehHHHHHHHHhCCCCCChhhhhhHH------
Q 048419          481 LAKIYEHGANP---QTTHIVGTLGYLAPELTRTGK------ATTSTDVYSYGILMLEVACGRRSIEPQKAAAEL------  545 (653)
Q Consensus       481 la~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~------~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~------  545 (653)
                      +++........   ......||+.|+|||++....      ++.++|||||||+||||+||..|+.........      
T Consensus       154 l~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~  233 (303)
T d1vjya_         154 LAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVP  233 (303)
T ss_dssp             TCEEEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSC
T ss_pred             ccccccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhccc
Confidence            99977543321   223467999999999987542      577999999999999999998876532211000      


Q ss_pred             --HHHHHHHhhhcccchhHhhhhcc--CcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          546 --LLVDWVKELHLEGEITQAIDQTL--DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       546 --~l~~~~~~~~~~~~~~~~~d~~l--~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                        ...+........+.    .++.+  .....+....+.+|+.+||+.||.+|||+.||++.|+
T Consensus       234 ~~~~~~~~~~~~~~~~----~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L~  293 (303)
T d1vjya_         234 SDPSVEEMRKVVCEQK----LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLS  293 (303)
T ss_dssp             SSCCHHHHHHHHTTSC----CCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHH
T ss_pred             ccchHHHHHHHHhccc----cCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHH
Confidence              00001111110000    11111  0112345577999999999999999999999999885

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3e-45  Score=376.92  Aligned_cols=265  Identities=25%  Similarity=0.330  Sum_probs=204.3

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc--hhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEe
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS--QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYD  407 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E  407 (653)
                      ++|+..+.||+|+||+||+|++..+|+.||||++....  ....+.+.+|++++++++|||||++++++.+.+.+++|||
T Consensus         2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~e   81 (298)
T d1gz8a_           2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE   81 (298)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEEEe
Confidence            57899999999999999999999999999999996542  2335688999999999999999999999999999999999


Q ss_pred             ccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccC
Q 048419          408 YVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEH  487 (653)
Q Consensus       408 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~  487 (653)
                      |+.+ ++.+++....   ...+++.+++.++.||+.||+|||+   ++|+||||||+|||++.++++||+|||+++....
T Consensus        82 ~~~~-~~~~~~~~~~---~~~l~e~~~~~~~~qil~~L~yLH~---~~IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~  154 (298)
T d1gz8a_          82 FLHQ-DLKKFMDASA---LTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV  154 (298)
T ss_dssp             CCSE-EHHHHHHHTT---TTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECSTTHHHHHCC
T ss_pred             ecCC-chhhhhhhhc---ccCCCHHHHHHHHHHHHHHHHHhhc---CCEEccccCchheeecccCcceeccCCcceeccC
Confidence            9965 4545554332   3569999999999999999999999   9999999999999999999999999999987644


Q ss_pred             CCCCcccccccCCcccCccccccCC-CCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcc-cc-hhHh-
Q 048419          488 GANPQTTHIVGTLGYLAPELTRTGK-ATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLE-GE-ITQA-  563 (653)
Q Consensus       488 ~~~~~~~~~~gt~~y~aPE~~~~~~-~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~-~~-~~~~-  563 (653)
                      .. .......||+.|+|||.+.... ++.++||||+||++|||++|+.||......+..  .......... .. .... 
T Consensus       155 ~~-~~~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~--~~i~~~~~~~~~~~~~~~~  231 (298)
T d1gz8a_         155 PV-RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQL--FRIFRTLGTPDEVVWPGVT  231 (298)
T ss_dssp             CS-BCTTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH--HHHHHHHCCCCTTTSTTGG
T ss_pred             Cc-ccceeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHHHHH--HHHHHhcCCCchhhccccc
Confidence            32 2334457999999999876655 578999999999999999999999865443221  1111111100 00 0000 


Q ss_pred             -hhhc------cCcCCH-----HHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          564 -IDQT------LDYYDL-----AEAELVLNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       564 -~d~~------l~~~~~-----~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                       ....      ......     .....+.+|+.+||+.||.+|||+.|++++-
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H~  284 (298)
T d1gz8a_         232 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHP  284 (298)
T ss_dssp             GSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTSG
T ss_pred             cccccccccccccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhCCH
Confidence             0000      000111     1236788999999999999999999999973

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.1e-45  Score=371.75  Aligned_cols=243  Identities=25%  Similarity=0.395  Sum_probs=199.4

Q ss_pred             hcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCch------hhHHHHHHHHHHHhhcC--CCceeeeeeeecccc
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQ------QGMKEFVAEIMSMGRLR--HRNLVQLHGWCRKQD  400 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~--H~niv~l~g~~~~~~  400 (653)
                      .++|+..++||+|+||+||+|++..+|+.||||++.....      .....+.+|+.++++++  |||||++++++.+.+
T Consensus         3 ~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~   82 (273)
T d1xwsa_           3 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPD   82 (273)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSS
T ss_pred             CCeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCC
Confidence            4679999999999999999999999999999999864311      12234678999999997  899999999999999


Q ss_pred             eeEEEEeccCC-CCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCC-CcEEEEe
Q 048419          401 ELLLVYDYVPN-GSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTY-LNAKLGD  478 (653)
Q Consensus       401 ~~~lV~E~~~~-gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~-~~~kl~D  478 (653)
                      ..++||||+.+ +++.+++...     ..+++.+++.++.||++||+|||+   ++|+||||||+|||++.+ +.+||+|
T Consensus        83 ~~~lv~e~~~~~~~l~~~~~~~-----~~l~e~~~~~~~~qi~~al~~lH~---~~iiHrDiKp~NIll~~~~~~vkl~D  154 (273)
T d1xwsa_          83 SFVLILERPEPVQDLFDFITER-----GALQEELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLID  154 (273)
T ss_dssp             EEEEEEECCSSEEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEETTTTEEEECC
T ss_pred             eEEEEEEeccCcchHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCCccccCcccceEEecCCCeEEECc
Confidence            99999999976 5677777553     358999999999999999999999   999999999999999854 7999999


Q ss_pred             ecCcccccCCCCCcccccccCCcccCccccccCCC-CCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcc
Q 048419          479 FGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKA-TTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLE  557 (653)
Q Consensus       479 fGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~  557 (653)
                      ||+++.....   ......||+.|+|||++.+..+ +.++||||+||++|||++|+.||......        ....   
T Consensus       155 FG~a~~~~~~---~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~i--------~~~~---  220 (273)
T d1xwsa_         155 FGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI--------IRGQ---  220 (273)
T ss_dssp             CTTCEECCSS---CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHH--------HHCC---
T ss_pred             cccceecccc---cccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCchHH--------hhcc---
Confidence            9999875432   2344679999999999987765 56799999999999999999999754321        0000   


Q ss_pred             cchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          558 GEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       558 ~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                      ..    +.+       ..+..+.+|+.+||+.||.+|||++|++++-
T Consensus       221 ~~----~~~-------~~s~~~~~li~~~L~~dp~~R~s~~eil~hp  256 (273)
T d1xwsa_         221 VF----FRQ-------RVSSECQHLIRWCLALRPSDRPTFEEIQNHP  256 (273)
T ss_dssp             CC----CSS-------CCCHHHHHHHHHHTCSSGGGSCCHHHHHTSG
T ss_pred             cC----CCC-------CCCHHHHHHHHHHccCCHhHCcCHHHHhcCH
Confidence            00    011       1235688999999999999999999999864

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=4e-44  Score=366.41  Aligned_cols=264  Identities=23%  Similarity=0.323  Sum_probs=201.5

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCc--hhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEe
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNS--QQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYD  407 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E  407 (653)
                      ++|...+.||+|+||+||+|+++ +|+.||||++....  ....+.+.+|+.+|++++||||+++++++...+..++++|
T Consensus         2 ~~Y~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e   80 (286)
T d1ob3a_           2 EKYHGLEKIGEGTYGVVYKAQNN-YGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFE   80 (286)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEET-TSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred             CCceeccEEecCCCcEEEEEEeC-CCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEEE
Confidence            57889999999999999999986 58999999996542  3335789999999999999999999999999999999999


Q ss_pred             ccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccC
Q 048419          408 YVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEH  487 (653)
Q Consensus       408 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~  487 (653)
                      |+.++.+..+....     ..+++.+++.++.||+.||+|||+   .+|+||||||+|||++.++.+||+|||++.....
T Consensus        81 ~~~~~~~~~~~~~~-----~~l~~~~~~~i~~qi~~~L~~LH~---~~IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~  152 (286)
T d1ob3a_          81 HLDQDLKKLLDVCE-----GGLESVTAKSFLLQLLNGIAYCHD---RRVLHRDLKPQNLLINREGELKIADFGLARAFGI  152 (286)
T ss_dssp             CCSEEHHHHHHTST-----TCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC
T ss_pred             eehhhhHHHHHhhc-----CCcchhhhHHHHHHHHHHHHHhcc---CcEEecCCCCceeeEcCCCCEEecccccceeccc
Confidence            99877666665433     459999999999999999999999   8999999999999999999999999999987654


Q ss_pred             CCCCcccccccCCcccCccccccC-CCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccch---hHh
Q 048419          488 GANPQTTHIVGTLGYLAPELTRTG-KATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGEI---TQA  563 (653)
Q Consensus       488 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~---~~~  563 (653)
                      .. .......+++.|+|||.+.+. .++.++|||||||++|||++|+.||......+...-.............   ...
T Consensus       153 ~~-~~~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  231 (286)
T d1ob3a_         153 PV-RKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTEL  231 (286)
T ss_dssp             ----------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGS
T ss_pred             Cc-cccceecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCChhhccchhhh
Confidence            32 223344689999999998654 5689999999999999999999999865443321111111100000000   000


Q ss_pred             h--hhcc--------CcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 048419          564 I--DQTL--------DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEF  603 (653)
Q Consensus       564 ~--d~~l--------~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  603 (653)
                      .  +...        ..........+.+++.+||+.||++|||++|++++
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~H  281 (286)
T d1ob3a_         232 PKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH  281 (286)
T ss_dssp             TTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             hhcccccccccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            0  0000        00111123678899999999999999999999875

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.7e-44  Score=371.17  Aligned_cols=265  Identities=26%  Similarity=0.351  Sum_probs=199.7

Q ss_pred             hcCcCcceeeeeeCcEEEEEEEeCCC-CcEEEEEEeccCc--hhhHHHHHHHHHHHhhc---CCCceeeeeeeecc----
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGLMPSL-GLEVAIKRIGHNS--QQGMKEFVAEIMSMGRL---RHRNLVQLHGWCRK----  398 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~~~~~-~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l---~H~niv~l~g~~~~----  398 (653)
                      .++|+..+.||+|+||+||+|++..+ ++.||||++....  ......+.+|+.+++.|   +||||++++++|..    
T Consensus         6 ~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~   85 (305)
T d1blxa_           6 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD   85 (305)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECS
T ss_pred             cCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeecccccc
Confidence            47899999999999999999998654 6779999986432  22233456677776665   79999999999853    


Q ss_pred             -cceeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEE
Q 048419          399 -QDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLG  477 (653)
Q Consensus       399 -~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~  477 (653)
                       ...++++|||++++++.......    ...+++..++.++.|++.||+|||+   ++|+||||||+|||+++++.+||+
T Consensus        86 ~~~~~~~~~e~~~~~~~~~~~~~~----~~~~~~~~~~~~~~qi~~aL~yLH~---~~ivHrDiKp~NILi~~~~~~kl~  158 (305)
T d1blxa_          86 RETKLTLVFEHVDQDLTTYLDKVP----EPGVPTETIKDMMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLA  158 (305)
T ss_dssp             SEEEEEEEEECCSCBHHHHHHHSC----TTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEEC
T ss_pred             cCceEEEEEEeccCCchhhhhhcc----CCCCCHHHHHHHHHHHHHHHHHHHh---CCEEecCCCccEEEEcCCCCeeec
Confidence             34689999999887765544333    3458899999999999999999999   999999999999999999999999


Q ss_pred             eecCcccccCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcc
Q 048419          478 DFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLE  557 (653)
Q Consensus       478 DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~  557 (653)
                      |||+++.....  .......||+.|+|||++.+..++.++||||+||++|||++|+.||......+...  .........
T Consensus       159 dfg~~~~~~~~--~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~--~i~~~~~~~  234 (305)
T d1blxa_         159 DFGLARIYSFQ--MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLG--KILDVIGLP  234 (305)
T ss_dssp             SCCSCCCCCGG--GGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH--HHHHHHCCC
T ss_pred             chhhhhhhccc--ccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCHHHHHH--HHHHhhCCC
Confidence            99998865332  23345689999999999999999999999999999999999999998765433221  111111000


Q ss_pred             c--chh------Hhhhhc-----cCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          558 G--EIT------QAIDQT-----LDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       558 ~--~~~------~~~d~~-----l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                      .  ...      ......     +........+.+.+|+.+||+.||.+|||+.|++++-
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~Hp  294 (305)
T d1blxa_         235 GEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHP  294 (305)
T ss_dssp             CGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSG
T ss_pred             chhcccccccchhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCh
Confidence            0  000      000000     0011112246688999999999999999999998763

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.7e-43  Score=364.79  Aligned_cols=270  Identities=22%  Similarity=0.288  Sum_probs=202.0

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC--chhhHHHHHHHHHHHhhcCCCceeeeeeeecc--------c
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRK--------Q  399 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~--------~  399 (653)
                      ++|+..+.||+|+||+||+|++..+|+.||||++...  .....+.+.+|+.+|++++|+|++++++++..        .
T Consensus        10 ~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~~   89 (318)
T d3blha1          10 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK   89 (318)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC---------
T ss_pred             CCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeecccccccccC
Confidence            6788999999999999999999989999999998543  33345678899999999999999999998855        3


Q ss_pred             ceeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEee
Q 048419          400 DELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDF  479 (653)
Q Consensus       400 ~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df  479 (653)
                      +.+++||||+.++.+..+...     ...++...+..++.||+.||.|||+   ++|+||||||+|||++.++.+||+||
T Consensus        90 ~~~~iv~e~~~~~~~~~~~~~-----~~~~~~~~~~~i~~qil~~l~~lH~---~~ivHrDlKp~NILl~~~~~~kl~df  161 (318)
T d3blha1          90 GSIYLVFDFCEHDLAGLLSNV-----LVKFTLSEIKRVMQMLLNGLYYIHR---NKILHRDMKAANVLITRDGVLKLADF  161 (318)
T ss_dssp             -CEEEEEECCCEEHHHHHTCT-----TCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCC
T ss_pred             ceEEEEEeccCCCccchhhhc-----ccccccHHHHHHHHHHHHHHHHhcc---CCEEecCcCchheeecCCCcEEeeec
Confidence            468999999988766655433     2347888899999999999999999   99999999999999999999999999


Q ss_pred             cCcccccCCCC---CcccccccCCcccCccccccC-CCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhh
Q 048419          480 GLAKIYEHGAN---PQTTHIVGTLGYLAPELTRTG-KATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELH  555 (653)
Q Consensus       480 Gla~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~-~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~  555 (653)
                      |+++.......   .......||+.|+|||.+.+. .++.++||||+||++|||++|+.||...................
T Consensus       162 g~~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i~~~~~~~  241 (318)
T d3blha1         162 GLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSI  241 (318)
T ss_dssp             TTCEECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCC
T ss_pred             ceeeecccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHHHHHHHHHhcCCC
Confidence            99986643221   122334699999999998765 68999999999999999999999998655433322221111111


Q ss_pred             cccchhHh--------hhhcc-CcCCHH-------HHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcCC
Q 048419          556 LEGEITQA--------IDQTL-DYYDLA-------EAELVLNLGLFCSAPNPVYRPDMRRVVEFLLGD  607 (653)
Q Consensus       556 ~~~~~~~~--------~d~~l-~~~~~~-------~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  607 (653)
                      ........        +.... ......       ....+.+|+.+||+.||++|||++|++++-...
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~Hpff~  309 (318)
T d3blha1         242 TPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFW  309 (318)
T ss_dssp             CTTTSTTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGS
T ss_pred             ChhhccccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHcChhhc
Confidence            10000000        00000 011111       134677899999999999999999999986543

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.1e-43  Score=370.08  Aligned_cols=261  Identities=26%  Similarity=0.325  Sum_probs=196.4

Q ss_pred             CcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeeeeeeccc------ceeEE
Q 048419          331 GFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQ------DELLL  404 (653)
Q Consensus       331 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~------~~~~l  404 (653)
                      .|...++||+|+||+||+|++..+|+.||||++.....    ...+|+++|++++|+||++++++|...      .+++|
T Consensus        21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~----~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~l   96 (350)
T d1q5ka_          21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL   96 (350)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS----SCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEE
T ss_pred             CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccch----HHHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEE
Confidence            47778999999999999999999999999999965432    224799999999999999999998442      35789


Q ss_pred             EEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCC-cEEEEeecCcc
Q 048419          405 VYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYL-NAKLGDFGLAK  483 (653)
Q Consensus       405 V~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~-~~kl~DfGla~  483 (653)
                      |||||+++.+..+......  ...+++.+++.++.||+.||+|||+   ++|+||||||+||||+.++ .+||+|||+++
T Consensus        97 v~Ey~~~~~~~~l~~~~~~--~~~l~~~~~~~i~~qil~aL~yLH~---~~IiHrDiKp~NILl~~~~~~~kl~DFG~a~  171 (350)
T d1q5ka_          97 VLDYVPETVYRVARHYSRA--KQTLPVIYVKLYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK  171 (350)
T ss_dssp             EEECCSEEHHHHHHHHHHT--TCCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECTTTCCEEECCCTTCE
T ss_pred             EEeccCCccHHHHHhhhhc--cCCCCHHHHHHHHHHHHHHHHHHHh---cCCcccCCCcceEEEecCCCceeEecccchh
Confidence            9999987644443322211  3468999999999999999999999   9999999999999999775 89999999998


Q ss_pred             cccCCCCCcccccccCCcccCcccccc-CCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhc--ccch
Q 048419          484 IYEHGANPQTTHIVGTLGYLAPELTRT-GKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHL--EGEI  560 (653)
Q Consensus       484 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~--~~~~  560 (653)
                      .......  .....||..|+|||.+.+ ..++.++||||+||++|||++|+.||......+...  ..++....  ...+
T Consensus       172 ~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~--~i~~~~g~~~~~~~  247 (350)
T d1q5ka_         172 QLVRGEP--NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV--EIIKVLGTPTREQI  247 (350)
T ss_dssp             ECCTTSC--CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHH--HHHHHHCCCCHHHH
T ss_pred             hccCCcc--cccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHHHHHH--HHHHHhCCChHHhh
Confidence            7654332  233579999999998764 568999999999999999999999997655433221  11111000  0000


Q ss_pred             hHh----hhhcc---------CcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          561 TQA----IDQTL---------DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       561 ~~~----~d~~l---------~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                      ...    .+...         ..........+.+|+.+||+.||.+|||+.|++++-
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp  304 (350)
T d1q5ka_         248 REMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHS  304 (350)
T ss_dssp             HHHCC---CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSG
T ss_pred             hhhccchhhccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhcCH
Confidence            000    00000         001112345688999999999999999999999863

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.8e-43  Score=368.27  Aligned_cols=263  Identities=24%  Similarity=0.295  Sum_probs=198.9

Q ss_pred             hhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC--chhhHHHHHHHHHHHhhcCCCceeeeeeeecccc-----
Q 048419          328 VTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQD-----  400 (653)
Q Consensus       328 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~-----  400 (653)
                      ..++|+..+.||+|+||+||+|.+..+|+.||||++...  .....+.+.+|+++|++++|||||+++++|...+     
T Consensus        16 ~~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~   95 (346)
T d1cm8a_          16 VRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDF   95 (346)
T ss_dssp             CBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTC
T ss_pred             cCCcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCcccccc
Confidence            346899999999999999999999999999999999753  3444678899999999999999999999997665     


Q ss_pred             -eeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEee
Q 048419          401 -ELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDF  479 (653)
Q Consensus       401 -~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df  479 (653)
                       .+++||||+ +.+|..++..      ..+++..++.++.||+.||.|||+   ++|+||||||+|||++.++.+||+||
T Consensus        96 ~~~~lv~e~~-~~~l~~~~~~------~~l~~~~~~~~~~qi~~aL~~LH~---~~IiHrDiKp~NIL~~~~~~~kl~Df  165 (346)
T d1cm8a_          96 TDFYLVMPFM-GTDLGKLMKH------EKLGEDRIQFLVYQMLKGLRYIHA---AGIIHRDLKPGNLAVNEDCELKILDF  165 (346)
T ss_dssp             CCCEEEEECC-SEEHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCC
T ss_pred             ceEEEEEecc-cccHHHHHHh------ccccHHHHHHHHHHHHHHHHHHHh---CCCcccccCcchhhcccccccccccc
Confidence             579999999 5577776643      348999999999999999999999   99999999999999999999999999


Q ss_pred             cCcccccCCCCCcccccccCCcccCccccccC-CCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhc--
Q 048419          480 GLAKIYEHGANPQTTHIVGTLGYLAPELTRTG-KATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHL--  556 (653)
Q Consensus       480 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~--  556 (653)
                      |+++.....    .+...||+.|+|||.+.+. .++.++||||+||++|||++|+.||....................  
T Consensus       166 g~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~  241 (346)
T d1cm8a_         166 GLARQADSE----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAE  241 (346)
T ss_dssp             TTCEECCSS----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHH
T ss_pred             cceeccCCc----cccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChHHHHHHHHhccCCCcHH
Confidence            999876432    3446799999999998764 568999999999999999999999987654332211111110000  


Q ss_pred             -----ccchhHhhhhcc--------CcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          557 -----EGEITQAIDQTL--------DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       557 -----~~~~~~~~d~~l--------~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                           ...........+        ..........+.+|+.+||+.||.+|||+.|++++-
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~Hp  302 (346)
T d1cm8a_         242 FVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHP  302 (346)
T ss_dssp             HHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSG
T ss_pred             HHhhhcchhhhhhhccCCcccccchHHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhcCh
Confidence                 000000000000        001112235678999999999999999999999974

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-43  Score=370.38  Aligned_cols=267  Identities=25%  Similarity=0.296  Sum_probs=201.3

Q ss_pred             hhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC-chhhHHHHHHHHHHHhhcCCCceeeeeeeecccc----ee
Q 048419          328 VTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN-SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQD----EL  402 (653)
Q Consensus       328 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~----~~  402 (653)
                      ++.+|+..+.||+|+||+||+|++..+|+.||||++... .....+.+++|+++|++++||||+++++++....    ..
T Consensus         6 i~~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~   85 (345)
T d1pmea_           6 VGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD   85 (345)
T ss_dssp             CCTTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCC
T ss_pred             cCCCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccce
Confidence            356799999999999999999999999999999999754 3445678899999999999999999999986653    23


Q ss_pred             EEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCc
Q 048419          403 LLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLA  482 (653)
Q Consensus       403 ~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla  482 (653)
                      +++++|+.+|+|.+++...      .+++..++.++.||+.||+|||+   ++|+||||||+||||+.++.+||+|||++
T Consensus        86 ~~l~~~~~~g~L~~~l~~~------~l~~~~i~~i~~qil~al~yLH~---~~iiHRDIKp~NILl~~~~~~kl~DfG~a  156 (345)
T d1pmea_          86 VYLVTHLMGADLYKLLKTQ------HLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLA  156 (345)
T ss_dssp             EEEEEECCCEEHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred             EEEEEeecCCchhhhhhcC------CCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCCCcceEEECCCCCEEEcccCce
Confidence            4555667799999999643      38999999999999999999999   99999999999999999999999999999


Q ss_pred             ccccCCCC--CcccccccCCcccCcccccc-CCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhccc-
Q 048419          483 KIYEHGAN--PQTTHIVGTLGYLAPELTRT-GKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEG-  558 (653)
Q Consensus       483 ~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~-  558 (653)
                      +.......  .......||+.|+|||++.. ..++.++||||+||++|||++|+.||......+.......+....... 
T Consensus       157 ~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~~  236 (345)
T d1pmea_         157 RVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED  236 (345)
T ss_dssp             EECCGGGCBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHH
T ss_pred             eeccCCCccceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHHHHhhhccCCChhh
Confidence            86543221  22344679999999999854 457889999999999999999999998655433222111111100000 


Q ss_pred             -------chhHhhhhc--cCcCCHH-----HHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 048419          559 -------EITQAIDQT--LDYYDLA-----EAELVLNLGLFCSAPNPVYRPDMRRVVEF  603 (653)
Q Consensus       559 -------~~~~~~d~~--l~~~~~~-----~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  603 (653)
                             .........  ....+..     ...++.+|+.+||+.||.+|||+.|++++
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~h  295 (345)
T d1pmea_         237 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH  295 (345)
T ss_dssp             HHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             hhhhhhhhhhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence                   000000000  0111111     12468899999999999999999999986

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-42  Score=355.36  Aligned_cols=266  Identities=24%  Similarity=0.285  Sum_probs=208.7

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC--chhhHHHHHHHHHHHhhcCCCceeeeeeeecccceeEEEEe
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQDELLLVYD  407 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E  407 (653)
                      ++|+..+.||+|+||+||+|++..+++.||||+++..  .....+.+.+|+.++++++||||++++++|.+.+..++|+|
T Consensus         2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~~   81 (292)
T d1unla_           2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE   81 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEEee
Confidence            5789999999999999999999999999999998644  33456789999999999999999999999999999999999


Q ss_pred             ccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecCcccccC
Q 048419          408 YVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKIYEH  487 (653)
Q Consensus       408 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~  487 (653)
                      ++.+++|..++...     +.+++..++.++.|+++||+|||+   ++|+||||||+|||++.++.+||+|||.++....
T Consensus        82 ~~~~~~l~~~~~~~-----~~~~~~~~~~~~~q~~~aL~~lH~---~~IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~  153 (292)
T d1unla_          82 FCDQDLKKYFDSCN-----GDLDPEIVKSFLFQLLKGLGFCHS---RNVLHRDLKPQNLLINRNGELKLANFGLARAFGI  153 (292)
T ss_dssp             CCSEEHHHHHHHTT-----TCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECCS
T ss_pred             eccccccccccccc-----cccchhHHHHHHHHHHHHHHHhhc---CCEeeecccCcccccccCCceeeeecchhhcccC
Confidence            99999888877653     347889999999999999999999   9999999999999999999999999999987654


Q ss_pred             CCCCcccccccCCcccCccccccCC-CCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhc---ccch---
Q 048419          488 GANPQTTHIVGTLGYLAPELTRTGK-ATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHL---EGEI---  560 (653)
Q Consensus       488 ~~~~~~~~~~gt~~y~aPE~~~~~~-~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~---~~~~---  560 (653)
                      ... ......++..|+|||.+.... ++.++||||+||++|||++|+.||.......+..  ..+.....   ....   
T Consensus       154 ~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~  230 (292)
T d1unla_         154 PVR-CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQL--KRIFRLLGTPTEEQWPSM  230 (292)
T ss_dssp             CCS-CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHH--HHHHHHHCCCCTTTCTTG
T ss_pred             CCc-cceeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHH--HHHHhhcCCCChhhhhhh
Confidence            332 223345778999999887665 6899999999999999999999975443322211  11111110   0000   


Q ss_pred             hHhhhh----------ccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHcC
Q 048419          561 TQAIDQ----------TLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLLG  606 (653)
Q Consensus       561 ~~~~d~----------~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  606 (653)
                      ....+.          .+..........+.+|+.+||+.||.+|||++|++++-.-
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~Hp~f  286 (292)
T d1unla_         231 TKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYF  286 (292)
T ss_dssp             GGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGG
T ss_pred             hhcccccccccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhcChhh
Confidence            000000          0011112234678899999999999999999999987543

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.5e-42  Score=356.86  Aligned_cols=259  Identities=20%  Similarity=0.234  Sum_probs=197.3

Q ss_pred             hcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCceeeee-eeecccceeEEEEe
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNLVQLH-GWCRKQDELLLVYD  407 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~-g~~~~~~~~~lV~E  407 (653)
                      .++|+..+.||+|+||.||+|++..+|+.||||++.....  .+++..|++++++++|+|++..+ ++..+.+..++|||
T Consensus         6 g~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme   83 (299)
T d1ckia_           6 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME   83 (299)
T ss_dssp             TTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCTT--SCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred             CCEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhcc--CHHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEE
Confidence            3579999999999999999999998999999999865432  24578899999999877765555 44566778899999


Q ss_pred             ccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEc---CCCcEEEEeecCccc
Q 048419          408 YVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLD---TYLNAKLGDFGLAKI  484 (653)
Q Consensus       408 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~---~~~~~kl~DfGla~~  484 (653)
                      |+ +++|...+...    ...+++..+..++.|++.||+|||+   ++|+||||||+|||++   .+..+||+|||+++.
T Consensus        84 ~~-~~~l~~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~---~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~  155 (299)
T d1ckia_          84 LL-GPSLEDLFNFC----SRKFSLKTVLLLADQMISRIEYIHS---KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKK  155 (299)
T ss_dssp             CC-CCBHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECCGGGTTCEEECCCSSCEE
T ss_pred             Ec-CCchhhhhhhc----cCCCcHHHHHHHHHHHHHHHHHHHH---CCeeeccCCHhhccccccCCCceeeeeccCccee
Confidence            99 55676666543    2458999999999999999999999   9999999999999985   456799999999997


Q ss_pred             ccCCCC------CcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhccc
Q 048419          485 YEHGAN------PQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEG  558 (653)
Q Consensus       485 ~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~  558 (653)
                      ......      .......||+.|+|||.+.+..++.++|||||||++|||+||+.||......................
T Consensus       156 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~  235 (299)
T d1ckia_         156 YRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMST  235 (299)
T ss_dssp             CBCTTTCCBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHHHHHHS
T ss_pred             ccccccccceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhhcccCCC
Confidence            754321      12344579999999999999999999999999999999999999997654432221111111111011


Q ss_pred             chhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          559 EITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       559 ~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                      ..... .   .    ..+..+.+++..||+.+|.+||++.++.+.|+
T Consensus       236 ~~~~~-~---~----~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~  274 (299)
T d1ckia_         236 PIEVL-C---K----GYPSEFATYLNFCRSLRFDDKPDYSYLRQLFR  274 (299)
T ss_dssp             CHHHH-T---T----TSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHH
T ss_pred             ChhHh-c---c----CCCHHHHHHHHHHccCChhHCcCHHHHHHHHH
Confidence            11111 0   1    12356889999999999999999998887765

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=100.00  E-value=5e-42  Score=351.71  Aligned_cols=259  Identities=18%  Similarity=0.188  Sum_probs=205.3

Q ss_pred             hcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCC-CceeeeeeeecccceeEEEEe
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRH-RNLVQLHGWCRKQDELLLVYD  407 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H-~niv~l~g~~~~~~~~~lV~E  407 (653)
                      .++|...+.||+|+||+||+|++..+|+.||||++.....  ...+.+|++.++.|+| +|++.+++++.+....++|||
T Consensus         4 g~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme   81 (293)
T d1csna_           4 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD--APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID   81 (293)
T ss_dssp             TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT--SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEE
T ss_pred             CCceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEccccC--cHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEEE
Confidence            4679999999999999999999998999999999854422  2356788889999975 899999999999999999999


Q ss_pred             ccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcC-----CCcEEEEeecCc
Q 048419          408 YVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDT-----YLNAKLGDFGLA  482 (653)
Q Consensus       408 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~-----~~~~kl~DfGla  482 (653)
                      |+ +++|.+++....    ..+++.++..++.|++.||+|||+   ++|+||||||+|||++.     ++.+||+|||++
T Consensus        82 ~~-~~~l~~~~~~~~----~~~~~~~~~~i~~q~~~~l~~lH~---~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a  153 (293)
T d1csna_          82 LL-GPSLEDLLDLCG----RKFSVKTVAMAAKQMLARVQSIHE---KSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMV  153 (293)
T ss_dssp             CC-CCBHHHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECCSSSTTTTCEEECCCTTC
T ss_pred             ec-CCCHHHHHHhhc----cchhhHHHHHHHHHHHHHHHHHHH---CCceeccCCccceeecCcccccCCceEEccccee
Confidence            99 689999886643    358899999999999999999999   99999999999999964     578999999999


Q ss_pred             ccccCCCC------CcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhc
Q 048419          483 KIYEHGAN------PQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHL  556 (653)
Q Consensus       483 ~~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~  556 (653)
                      +.......      .......||+.|+|||.+.+..++.++|||||||++|||++|+.||..............+.....
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~~  233 (293)
T d1csna_         154 KFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQ  233 (293)
T ss_dssp             EESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHH
T ss_pred             EEcccCccccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHHHHHhccC
Confidence            97654321      123345799999999999999999999999999999999999999975543322221111111111


Q ss_pred             ccchhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          557 EGEITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       557 ~~~~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                      .....++    ...    .++++.+++..|++.+|++||+++.+.+.|+
T Consensus       234 ~~~~~~l----~~~----~p~~l~~ii~~~~~~~~~~rP~y~~l~~~l~  274 (293)
T d1csna_         234 STPLREL----CAG----FPEEFYKYMHYARNLAFDATPDYDYLQGLFS  274 (293)
T ss_dssp             HSCHHHH----TTT----SCHHHHHHHHHHHHCCTTCCCCHHHHHHHHH
T ss_pred             CCChHHh----cCC----CCHHHHHHHHHHhcCCcccCcCHHHHHHHHH
Confidence            1111111    111    1356889999999999999999988877664

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.7e-43  Score=361.69  Aligned_cols=254  Identities=24%  Similarity=0.333  Sum_probs=203.3

Q ss_pred             cCcCcceeeeeeCcEEEEEEEe---CCCCcEEEEEEeccC----chhhHHHHHHHHHHHhhcCC-Cceeeeeeeecccce
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLM---PSLGLEVAIKRIGHN----SQQGMKEFVAEIMSMGRLRH-RNLVQLHGWCRKQDE  401 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~---~~~~~~vavK~~~~~----~~~~~~~~~~E~~~l~~l~H-~niv~l~g~~~~~~~  401 (653)
                      ++|+..+.||+|+||+||+|+.   +.+|+.||||++...    .....+.+.+|++++++++| |||+++++++.+...
T Consensus        24 ~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~~  103 (322)
T d1vzoa_          24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK  103 (322)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred             hceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCCc
Confidence            5699999999999999999986   446899999998643    22335678899999999977 899999999999999


Q ss_pred             eEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeecC
Q 048419          402 LLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFGL  481 (653)
Q Consensus       402 ~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl  481 (653)
                      .+++|||+.+|+|.+++....     .++......++.||+.||+|||+   ++|+||||||+||||+.++.+||+|||+
T Consensus       104 ~~~v~e~~~~~~L~~~i~~~~-----~~~e~~~~~~~~Qi~~al~~lH~---~~ivHrDiKp~Nill~~~~~vkL~DFG~  175 (322)
T d1vzoa_         104 LHLILDYINGGELFTHLSQRE-----RFTEHEVQIYVGEIVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGL  175 (322)
T ss_dssp             EEEEECCCCSCBHHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEESCSSE
T ss_pred             eeeeeecccccHHHHHHHhcc-----cccHHHHHHHHHHHHHHHHHhhc---CCEEeccCCccceeecCCCCEEEeeccc
Confidence            999999999999999997653     36778889999999999999999   8999999999999999999999999999


Q ss_pred             cccccCCCCCcccccccCCcccCccccccC--CCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhcccc
Q 048419          482 AKIYEHGANPQTTHIVGTLGYLAPELTRTG--KATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEGE  559 (653)
Q Consensus       482 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~  559 (653)
                      ++.+............|++.|+|||.+.+.  .++.++|||||||+||||++|+.||...........  ......    
T Consensus       176 a~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~--i~~~~~----  249 (322)
T d1vzoa_         176 SKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAE--ISRRIL----  249 (322)
T ss_dssp             EEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHH--HHHHHH----
T ss_pred             hhhhcccccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHH--HHHhcc----
Confidence            987654443344456799999999998754  468899999999999999999999976543221110  000000    


Q ss_pred             hhHhhhhccCcCCHHHHHHHHHHHHHcCCCCCCCCC-----CHHHHHHH
Q 048419          560 ITQAIDQTLDYYDLAEAELVLNLGLFCSAPNPVYRP-----DMRRVVEF  603 (653)
Q Consensus       560 ~~~~~d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~  603 (653)
                           ... ...+......+.+++.+||+.||.+||     |++|++++
T Consensus       250 -----~~~-~~~~~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~H  292 (322)
T d1vzoa_         250 -----KSE-PPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH  292 (322)
T ss_dssp             -----HCC-CCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred             -----cCC-CCCcccCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHcC
Confidence                 000 011122356788999999999999999     48899874

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=100.00  E-value=2.9e-41  Score=351.97  Aligned_cols=259  Identities=20%  Similarity=0.277  Sum_probs=199.5

Q ss_pred             cCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcC-CCceeeeeeeecc--cceeEEEE
Q 048419          330 KGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLR-HRNLVQLHGWCRK--QDELLLVY  406 (653)
Q Consensus       330 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~--~~~~~lV~  406 (653)
                      ++|+..++||+|+||+||+|++..+|+.||||+++...   .+.+.+|+++|++++ ||||+++++++..  ...+++||
T Consensus        35 d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~~---~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v~  111 (328)
T d3bqca1          35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF  111 (328)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSSC---HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEEE
T ss_pred             cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHHH---HHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeEEE
Confidence            57999999999999999999999999999999996543   467889999999995 9999999999864  35689999


Q ss_pred             eccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCC-cEEEEeecCcccc
Q 048419          407 DYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYL-NAKLGDFGLAKIY  485 (653)
Q Consensus       407 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~-~~kl~DfGla~~~  485 (653)
                      |||++++|..+.        +.+++.++..++.||+.||+|||+   ++|+||||||+|||++.++ .+||+|||+++..
T Consensus       112 e~~~~~~L~~~~--------~~l~e~~i~~i~~qil~aL~~LH~---~gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~~  180 (328)
T d3bqca1         112 EHVNNTDFKQLY--------QTLTDYDIRFYMYEILKALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFY  180 (328)
T ss_dssp             ECCCSCBGGGTT--------TSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTTEEEECCGGGCEEC
T ss_pred             eecCCCcHHHHh--------cCCCHHHHHHHHHHHHHHHHHHhh---cccccccccccceEEcCCCCeeeecccccceec
Confidence            999999997764        238899999999999999999999   9999999999999998655 5999999999876


Q ss_pred             cCCCCCcccccccCCcccCccccccCC-CCCccceeehHHHHHHHHhCCCCCChhhhhhHHH--H---------HHHHHh
Q 048419          486 EHGANPQTTHIVGTLGYLAPELTRTGK-ATTSTDVYSYGILMLEVACGRRSIEPQKAAAELL--L---------VDWVKE  553 (653)
Q Consensus       486 ~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~--l---------~~~~~~  553 (653)
                      ....  ......+|+.|+|||.+.+.. ++.++||||+||+++||++|+.||..........  +         .++...
T Consensus       181 ~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~  258 (328)
T d3bqca1         181 HPGQ--EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDK  258 (328)
T ss_dssp             CTTC--CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred             cCCC--cccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhh
Confidence            5432  234457899999999987654 7899999999999999999999997543321110  0         011111


Q ss_pred             hhccc--chhHhhhh--------cc-CcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 048419          554 LHLEG--EITQAIDQ--------TL-DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFL  604 (653)
Q Consensus       554 ~~~~~--~~~~~~d~--------~l-~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  604 (653)
                      .....  ........        .. ..........+.+|+.+||+.||.+|||++|++++-
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~Hp  320 (328)
T d3bqca1         259 YNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHP  320 (328)
T ss_dssp             TTCCCCGGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHTSG
T ss_pred             cccccCcccchhcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhcCc
Confidence            00000  00000000        00 000112246788999999999999999999999854

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-41  Score=357.73  Aligned_cols=262  Identities=21%  Similarity=0.252  Sum_probs=195.0

Q ss_pred             hcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC--chhhHHHHHHHHHHHhhcCCCceeeeeeeecc------cc
Q 048419          329 TKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRK------QD  400 (653)
Q Consensus       329 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~------~~  400 (653)
                      .++|+..++||+|+||+||+|.+..+|+.||||++...  .....+.+.+|+.++++++||||+++++++..      ..
T Consensus        16 ~~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~   95 (355)
T d2b1pa1          16 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ   95 (355)
T ss_dssp             ETTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred             cCCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCc
Confidence            36799999999999999999999999999999999654  34455678999999999999999999999854      36


Q ss_pred             eeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeec
Q 048419          401 ELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFG  480 (653)
Q Consensus       401 ~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG  480 (653)
                      .+|+|||||.++.+ +.+.       ..+++..++.++.||+.||.|||+   ++|+||||||+|||++.++.+|++|||
T Consensus        96 ~~~iv~Ey~~~~l~-~~~~-------~~~~~~~i~~~~~qil~gl~~LH~---~giiHrDlKP~Nil~~~~~~~kl~df~  164 (355)
T d2b1pa1          96 DVYLVMELMDANLC-QVIQ-------MELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFG  164 (355)
T ss_dssp             EEEEEEECCSEEHH-HHHT-------SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCCC
T ss_pred             eeEEEEeccchHHH-Hhhh-------cCCCHHHHHHHHHHHHHHHHHhhh---cccccccCCccccccccccceeeechh
Confidence            78999999976544 4442       237899999999999999999999   999999999999999999999999999


Q ss_pred             CcccccCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhc----
Q 048419          481 LAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHL----  556 (653)
Q Consensus       481 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~----  556 (653)
                      +++......  ......+|+.|+|||.+.+..++.++||||+||+++||++|+.||..........  ..+.....    
T Consensus       165 ~~~~~~~~~--~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~--~i~~~~~~~~~~  240 (355)
T d2b1pa1         165 LARTAGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWN--KVIEQLGTPCPE  240 (355)
T ss_dssp             C-----------------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH--HHHHHHCCCCHH
T ss_pred             hhhcccccc--ccccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHHHHHH--HHHHhccCCCHH
Confidence            988654432  3344578999999999999999999999999999999999999997554322111  11100000    


Q ss_pred             -----cc---------------chhHhhhhcc----CcCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          557 -----EG---------------EITQAIDQTL----DYYDLAEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       557 -----~~---------------~~~~~~d~~l----~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                           ..               ..........    ..........+.+|+.+||+.||++|||+.|++++-.
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~Hpw  313 (355)
T d2b1pa1         241 FMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPY  313 (355)
T ss_dssp             HHTTSCHHHHHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTT
T ss_pred             HHHHhhhhHHHHhhcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcc
Confidence                 00               0011111111    0112234577899999999999999999999998753

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.2e-41  Score=355.82  Aligned_cols=263  Identities=24%  Similarity=0.323  Sum_probs=200.2

Q ss_pred             hhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC--chhhHHHHHHHHHHHhhcCCCceeeeeeeeccc-----c
Q 048419          328 VTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN--SQQGMKEFVAEIMSMGRLRHRNLVQLHGWCRKQ-----D  400 (653)
Q Consensus       328 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~-----~  400 (653)
                      ++++|+..+.||+|+||+||+|++..+|+.||||++...  .....+.+.+|+++|++++|||+|++++++...     .
T Consensus        16 ~~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~   95 (348)
T d2gfsa1          16 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF   95 (348)
T ss_dssp             EETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTC
T ss_pred             CCCCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccC
Confidence            356899999999999999999999999999999999754  334556788999999999999999999988543     3


Q ss_pred             eeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcEEEEeec
Q 048419          401 ELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNAKLGDFG  480 (653)
Q Consensus       401 ~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG  480 (653)
                      ..+++++|+.+|+|.+++...      .+++.++..++.||+.||+|||+   ++|+||||||+|||++.++.+|++|||
T Consensus        96 ~~~~i~~~~~gg~L~~~~~~~------~l~e~~~~~i~~qil~aL~~LH~---~giiHrDiKp~NILi~~~~~~kl~dfg  166 (348)
T d2gfsa1          96 NDVYLVTHLMGADLNNIVKCQ------KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFG  166 (348)
T ss_dssp             CCCEEEEECCSEEHHHHHTTC------CCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECCC-
T ss_pred             ceEEEEEeecCCchhhhcccc------cccHHHHHHHHHHHHHHHHHHHh---CCCcccccCCccccccccccccccccc
Confidence            456677788899999998543      38999999999999999999999   999999999999999999999999999


Q ss_pred             CcccccCCCCCcccccccCCcccCccccccC-CCCCccceeehHHHHHHHHhCCCCCChhhhhhHHHHHHHHHhhhccc-
Q 048419          481 LAKIYEHGANPQTTHIVGTLGYLAPELTRTG-KATTSTDVYSYGILMLEVACGRRSIEPQKAAAELLLVDWVKELHLEG-  558 (653)
Q Consensus       481 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~-  558 (653)
                      ++.....    ......|++.|+|||...+. .++.++||||+||++|||++|+.||...+........  ........ 
T Consensus       167 ~a~~~~~----~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i--~~~~~~~~~  240 (348)
T d2gfsa1         167 LARHTDD----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI--LRLVGTPGA  240 (348)
T ss_dssp             ---CCTG----GGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH--HHHHCCCCH
T ss_pred             hhcccCc----ccccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHH--HHhcCCCCh
Confidence            9975432    23445788999999987665 4688999999999999999999999765443221111  11100000 


Q ss_pred             --------chhHhhhhcc---CcCCH-----HHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHc
Q 048419          559 --------EITQAIDQTL---DYYDL-----AEAELVLNLGLFCSAPNPVYRPDMRRVVEFLL  605 (653)
Q Consensus       559 --------~~~~~~d~~l---~~~~~-----~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  605 (653)
                              .........+   .....     .....+.+|+.+||+.||.+|||+.|++++-.
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~Hp~  303 (348)
T d2gfsa1         241 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY  303 (348)
T ss_dssp             HHHTTCCCHHHHHHHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGG
T ss_pred             HHhhhccchhhhhhhhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhcCHh
Confidence                    0000000001   11111     12356889999999999999999999998643

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=2.3e-36  Score=318.94  Aligned_cols=266  Identities=18%  Similarity=0.197  Sum_probs=193.5

Q ss_pred             CcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcC-----------CCceeeeeeeeccc
Q 048419          331 GFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLR-----------HRNLVQLHGWCRKQ  399 (653)
Q Consensus       331 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----------H~niv~l~g~~~~~  399 (653)
                      +|+..++||+|+||+||+|++..+|+.||||+++... ...+.+.+|+.++++++           |+||+++++++...
T Consensus        14 rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~-~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~~   92 (362)
T d1q8ya_          14 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHK   92 (362)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEE
T ss_pred             cEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeccc-cchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeeec
Confidence            4889999999999999999999999999999996543 33467788998888875           57899999887654


Q ss_pred             --ceeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCc----
Q 048419          400 --DELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLN----  473 (653)
Q Consensus       400 --~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~----  473 (653)
                        ...+++++++..+...........  ...+++..+..++.||++||+|||+.  .+|+||||||+||||+.++.    
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~~i~~qil~al~~lh~~--~~IvHrDlKp~NIll~~~~~~~~~  168 (362)
T d1q8ya_          93 GPNGVHVVMVFEVLGENLLALIKKYE--HRGIPLIYVKQISKQLLLGLDYMHRR--CGIIHTDIKPENVLMEIVDSPENL  168 (362)
T ss_dssp             ETTEEEEEEEECCCCEEHHHHHHHTT--TSCCCHHHHHHHHHHHHHHHHHHHHT--TCEECSCCSGGGEEEEEEETTTTE
T ss_pred             cccceeeeeeeccccccccccccccc--ccCCcHHHHHHHHHHHHHHHHHHhhh--cCcccccCChhHeeeeccCccccc
Confidence              456677777655544333322211  45678889999999999999999973  78999999999999976653    


Q ss_pred             --EEEEeecCcccccCCCCCcccccccCCcccCccccccCCCCCccceeehHHHHHHHHhCCCCCChhhhhhH----HHH
Q 048419          474 --AKLGDFGLAKIYEHGANPQTTHIVGTLGYLAPELTRTGKATTSTDVYSYGILMLEVACGRRSIEPQKAAAE----LLL  547 (653)
Q Consensus       474 --~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~s~Gvvl~elltG~~p~~~~~~~~~----~~l  547 (653)
                        +|++|||.+......    .....||+.|+|||.+....++.++||||+||+++||++|+.||........    ..+
T Consensus       169 ~~~kl~dfg~s~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~  244 (362)
T d1q8ya_         169 IQIKIADLGNACWYDEH----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHI  244 (362)
T ss_dssp             EEEEECCCTTCEETTBC----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHH
T ss_pred             ceeeEeecccccccccc----cccccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCCCCccccccchhHHH
Confidence              999999999865432    2345799999999999999999999999999999999999999975432111    111


Q ss_pred             HHHHHhhhccc-ch-------hHhhh--------------------hccCcCCHHHHHHHHHHHHHcCCCCCCCCCCHHH
Q 048419          548 VDWVKELHLEG-EI-------TQAID--------------------QTLDYYDLAEAELVLNLGLFCSAPNPVYRPDMRR  599 (653)
Q Consensus       548 ~~~~~~~~~~~-~~-------~~~~d--------------------~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~e  599 (653)
                      ...+....... ..       ....+                    .............+.+|+.+||+.||.+|||++|
T Consensus       245 ~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e  324 (362)
T d1q8ya_         245 AQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGG  324 (362)
T ss_dssp             HHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHH
T ss_pred             HHHHHHhCCCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHH
Confidence            11111110000 00       00000                    0001233456788999999999999999999999


Q ss_pred             HHHHHc
Q 048419          600 VVEFLL  605 (653)
Q Consensus       600 vl~~L~  605 (653)
                      ++++-.
T Consensus       325 ~L~Hp~  330 (362)
T d1q8ya_         325 LVNHPW  330 (362)
T ss_dssp             HHTCGG
T ss_pred             HhcCcc
Confidence            998743

>d1nlsa_ b.29.1.1 (A:) Concanavalin A {Jack bean (Canavalia ensiformis) [TaxId: 3823]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Concanavalin A
species: Jack bean (Canavalia ensiformis) [TaxId: 3823]

Probab=99.96  E-value=1.4e-30  Score=251.99  Aligned_cols=114  Identities=28%  Similarity=0.431  Sum_probs=104.6

Q ss_pred             CCceEEEEeecccccccCCCCCCeeeEecCCCCcCCcccCccccCCCCccccccCCCCceEEEEEecCCceEEEEEEeeC
Q 048419          120 STRMLAVEFDIIQNTELIDINDNHVGIDISSLISSASEPASYYSGNNHRIPILLRSGDPIQAWVDYSSQEMLINVSICPL  199 (653)
Q Consensus       120 ~~~~vaVEFDt~~n~~~~d~~~~Hvgid~ns~~s~~~~~~~~~~~~~~~~~~~l~~g~~~~~~I~Y~~~~~~l~v~~~~~  199 (653)
                      +|++|||||||++|.+++||++||||||+|++.|.++.+            +++.+|+.++|||+||+.+++|+|++...
T Consensus         1 an~ivAVEFDT~~N~~~~Dp~~nHIgIdvns~~S~~~~~------------~~l~~G~~~~v~I~Yd~~~~~L~V~~~~~   68 (237)
T d1nlsa_           1 ADTIVAVELDTYPNTDIGDPSYPHIGIDIKSVRSKKTAK------------WNMQNGKVGTAHIIYNSVDKRLSAVVSYP   68 (237)
T ss_dssp             CCCEEEEEEECSCCGGGTCCSSCEEEEEESSSSCSEEEE------------CCCCTTCEEEEEEEEETTTTEEEEEEECT
T ss_pred             CCCEEEEEEECCcCCCCCCCCCCEEEEEeCCCCccceec------------ccccCCCEEEEEEEEecCCcEEEEEEecC
Confidence            378999999999999889999999999999999877654            36789999999999999999999999754


Q ss_pred             CCCCCCCCceeeeecCCcccccceEEeEecccCcccceeeecceeeeec
Q 048419          200 GVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLITASHNVHGWSISIG  248 (653)
Q Consensus       200 ~~~~~~~~~l~~~~dL~~~l~~~~~vGFsastg~~~~~~~i~sWsf~~~  248 (653)
                         ++..|+++++|||+++|+++||||||||||...|.|+|++|+|++.
T Consensus        69 ---~~~~~~ls~~vdL~~~l~~~vyvGFSAsTG~~~~~h~I~sWsFsS~  114 (237)
T d1nlsa_          69 ---NADSATVSYDVDLDNVLPEWVRVGLSASTGLYKETNTILSWSFTSK  114 (237)
T ss_dssp             ---TSCCEEEEEECCGGGTSCSEEEEEEEEECSSSCCCCEEEEEEEEEE
T ss_pred             ---CCCCeEEEEEEChHHhCCCcEEEEEEeecCCCccceEEEEEEEEee
Confidence               4677899999999999999999999999999999999999999875

>d1gv9a_ b.29.1.13 (A:) Carbohydrate-recognition domain of P58/ERGIC-53 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Lectin leg-like
domain: Carbohydrate-recognition domain of P58/ERGIC-53
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.95  E-value=1.1e-27  Score=235.29  Aligned_cols=209  Identities=16%  Similarity=0.150  Sum_probs=141.2

Q ss_pred             eEEeCCCCC-----CCeEEecceEecCCCcEEecCCCCCceEEEEcCCCeecccCCCCceeeeEEEEEEEEecCCCCCCC
Q 048419           10 SFLYNGFLH-----ANLSLEGAAYISTSGILTVTNKSEGLIGHALYPNPLRFKTSNKSVAIDFRTNFVFSILPKYPDLGG   84 (653)
Q Consensus        10 ~f~~~~f~~-----~~l~~~g~a~~~~~g~l~Lt~~~~~~~Gr~~y~~pi~~~~~~~~~~~sF~t~F~f~i~~~~~~~~g   84 (653)
                      ||..|.+..     .+..++|+|.+. ++.|+||++..+++|+|||++|+++.        +|+|+|+|.+... ...+|
T Consensus        10 sf~~P~~~~~~~~~~~w~~~G~a~i~-~~~i~LT~~~~~~~G~v~~~~p~~~~--------~F~~~f~f~~~~~-~~~gg   79 (228)
T d1gv9a_          10 SFKGPHLVQSDGTVPFWAHAGNAIPS-ADQIRIAPSLKSQRGSVWTKTKAAFE--------NWEVEVTFRVTGR-GRIGA   79 (228)
T ss_dssp             CEECSSCSCTTSCBTTEEEEETCEEC-SSCEEEECSSTTCEEEEEESSCBCCS--------SEEEEEEEEEECS-SSCCC
T ss_pred             ccCCCcccCCCCCccceEEeeeEEEE-CCEEEECCCCCCCEEEEEeCCCcccc--------CcEEEEEEeccCC-CCCCC
Confidence            555565532     357899999886 78899999999999999999999983        6999999999764 35689


Q ss_pred             CceEEEEecCCCCCCCCCCccccCCCcccCCCCCCCCceEEEEeecccccccCCCCCCeeeEecCCCCcCCcccCccccC
Q 048419           85 QGLAFIIISTNRPENCLANQFLGLPNITMSSSTKFSTRMLAVEFDIIQNTELIDINDNHVGIDISSLISSASEPASYYSG  164 (653)
Q Consensus        85 dGlaF~l~~~~~~~~~~~g~~lG~~~~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~~~Hvgid~ns~~s~~~~~~~~~~~  164 (653)
                      |||||+|++...    ..|+.+|..+..         +-+||||||+.|.  +|++.+|+.++.|...............
T Consensus        80 dG~aF~i~~~~~----~~g~~~G~~~~~---------~glaVefDt~~n~--~~~~~~~~~~~~n~~~~~~~~~~~~~~~  144 (228)
T d1gv9a_          80 DGLAIWYTENQG----LDGPVFGSADMW---------NGVGIFFDSFDND--GKKNNPAIVVVGNNGQINYDHQNDGATQ  144 (228)
T ss_dssp             CEEEEEEESSCC----CEEEETTECSCC---------EEEEEEEECCCC-------CCEEEEEEEESCCCCCHHHHHHHH
T ss_pred             CEEEEEEecCCC----CCCCccCcCCCC---------ceEEEEEEccccc--CCCCCCcEEEEecCCcceeeecCCCccc
Confidence            999999998643    345556654432         2389999999997  6888889988876533211111000000


Q ss_pred             CCCccccc-cCCCCceEEEEEecCCceEEEEEEeeCCCCCCCCCceeeeecCCcccccceEEeEecccCcccceeeecce
Q 048419          165 NNHRIPIL-LRSGDPIQAWVDYSSQEMLINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLITASHNVHGW  243 (653)
Q Consensus       165 ~~~~~~~~-l~~g~~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~~l~~~~dL~~~l~~~~~vGFsastg~~~~~~~i~sW  243 (653)
                      ........ ...+..+++||+|+  .+.|+|++..........+.....++ ...+|++||||||||||...+.|.|++|
T Consensus       145 ~~~~~~~~~~~~~~~~~i~~~~~--~~~l~v~i~~~~~~~~~~~~~~~~~~-~~~l~~~~y~GFTAsTG~~~~~H~I~s~  221 (228)
T d1gv9a_         145 ALASCQRDFRNKPYPVRAKITYY--QKTLTVMINNGFTPDKNDYEFCAKVE-NMVIPTQGHFGISAATGGLADDHDVLSF  221 (228)
T ss_dssp             CSEEECCCCBSCSSCEEEEEEEE--TTEEEEEEECSSCCCTTCCEEEEEET-TCCCCSSBEEEEEEECCSSCCEEEEEEE
T ss_pred             cccceeeeecCCceEEEEEEEec--CCEEEEEEeccccCCCcceeEEEEec-ccccCCCEEEEEEEeCCCCcCeEEEEEE
Confidence            00001111 12345566666665  56788888765544333333333333 5568999999999999999999999999


Q ss_pred             eee
Q 048419          244 SIS  246 (653)
Q Consensus       244 sf~  246 (653)
                      .+.
T Consensus       222 ~~~  224 (228)
T d1gv9a_         222 LTF  224 (228)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            875

>d1nlsa_ b.29.1.1 (A:) Concanavalin A {Jack bean (Canavalia ensiformis) [TaxId: 3823]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Concanavalin A
species: Jack bean (Canavalia ensiformis) [TaxId: 3823]

Probab=99.90  E-value=1.7e-24  Score=208.94  Aligned_cols=105  Identities=28%  Similarity=0.428  Sum_probs=92.2

Q ss_pred             cCceeEEeCCCC--CCCeEEecceEecCCCcEEecCCC------CCceEEEEcCCCeecccCCCCceeeeEEEEEEEEec
Q 048419            6 ADTTSFLYNGFL--HANLSLEGAAYISTSGILTVTNKS------EGLIGHALYPNPLRFKTSNKSVAIDFRTNFVFSILP   77 (653)
Q Consensus         6 ~~~~~f~~~~f~--~~~l~~~g~a~~~~~g~l~Lt~~~------~~~~Gr~~y~~pi~~~~~~~~~~~sF~t~F~f~i~~   77 (653)
                      ++.++|+|++|.  .+||+|+|+|++.++|.|+||+..      ..++|||+|++||+|||+ +++++||+|+|+|.|.+
T Consensus       123 sn~~~F~f~~F~~~~~nl~l~G~A~i~~~G~l~LT~~~~~~~~~~~s~Gra~y~~Pv~l~d~-t~~~~SFsT~F~F~I~~  201 (237)
T d1nlsa_         123 TNALHFMFNQFSKDQKDLILQGDATTGTDGNLELTRVSSNGSPQGSSVGRALFYAPVHIWES-SAVVASFEATFTFLIKS  201 (237)
T ss_dssp             EEEEEEEESCCCTTCTTEEEEETCEEEETTEEESSCBCTTSCBCSSCEEEEEESSCEECCCT-TEEEEEEEEEEEEECCC
T ss_pred             cccceEEeeecCCCCCCEEEeeeeEecCCCcEEecCCCCCCcccCcceEEEEeCCCEEEECC-CCcEeeEEEEEEEEEec
Confidence            457999999996  479999999999889999999754      458999999999999996 78999999999999987


Q ss_pred             CCCCCCCCceEEEEecCC-CCCCCCCCccccCCCcc
Q 048419           78 KYPDLGGQGLAFIIISTN-RPENCLANQFLGLPNIT  112 (653)
Q Consensus        78 ~~~~~~gdGlaF~l~~~~-~~~~~~~g~~lG~~~~~  112 (653)
                      .+ ..+||||||||+|.. ..|.++.|+||||+|.+
T Consensus       202 ~~-~~~gdG~aF~iap~~~~~p~~~~g~~LGL~n~~  236 (237)
T d1nlsa_         202 PD-SHPADGIAFFISNIDSSIPSGSTGRLLGLFPDA  236 (237)
T ss_dssp             SS-SSCCCEEEEEEECTTCCCCTTCCGGGTTTCSSC
T ss_pred             CC-CCCCCCEEEEEeCCCCCCCCCCCCCeeeeccCC
Confidence            65 458999999999965 44778899999999865

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.86  E-value=5.5e-22  Score=188.59  Aligned_cols=164  Identities=15%  Similarity=0.122  Sum_probs=119.9

Q ss_pred             CcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCch------------------hhHHHHHHHHHHHhhcCCCceeeeee
Q 048419          333 GEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQ------------------QGMKEFVAEIMSMGRLRHRNLVQLHG  394 (653)
Q Consensus       333 ~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~------------------~~~~~~~~E~~~l~~l~H~niv~l~g  394 (653)
                      ...++||+|+||.||+|.+. +|+.||||+++....                  ........|...+.++.|.+++..++
T Consensus         3 ~vg~~IG~G~~g~Vy~a~~~-~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~   81 (191)
T d1zara2           3 AIGKLMGEGKESAVFNCYSE-KFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYA   81 (191)
T ss_dssp             EEEEEEEECSSEEEEEEEET-TTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEE
T ss_pred             hhCCEeeeCcceEEEEEECC-CCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEE
Confidence            34689999999999999985 589999998753210                  11233456888999999999988876


Q ss_pred             eecccceeEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEEcCCCcE
Q 048419          395 WCRKQDELLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEECNQRVVHRDVKPSNILLDTYLNA  474 (653)
Q Consensus       395 ~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~  474 (653)
                      +..    .+++|||+++..+..            ++.....+++.|++++|+|||+   ++|+||||||+|||++++ .+
T Consensus        82 ~~~----~~lvme~~~~~~~~~------------l~~~~~~~i~~ql~~~l~~lH~---~giiHrDiKP~NILv~~~-~~  141 (191)
T d1zara2          82 WEG----NAVLMELIDAKELYR------------VRVENPDEVLDMILEEVAKFYH---RGIVHGDLSQYNVLVSEE-GI  141 (191)
T ss_dssp             EET----TEEEEECCCCEEGGG------------CCCSCHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEEEETT-EE
T ss_pred             ecC----CEEEEEeeccccccc------------hhhHHHHHHHHHHHHHHHHHhh---CCEEEccCChhheeeeCC-CE
Confidence            532    379999998754422            4555667899999999999999   999999999999999865 48


Q ss_pred             EEEeecCcccccCCCCCcccccccCCcccC------ccccccCCCCCccceeehHHHHH
Q 048419          475 KLGDFGLAKIYEHGANPQTTHIVGTLGYLA------PELTRTGKATTSTDVYSYGILML  527 (653)
Q Consensus       475 kl~DfGla~~~~~~~~~~~~~~~gt~~y~a------PE~~~~~~~~~ksDV~s~Gvvl~  527 (653)
                      +|+|||+|+........         .|..      .|.+ ..++..++|+||..--++
T Consensus       142 ~liDFG~a~~~~~~~~~---------~~l~rd~~~~~~~f-~r~y~~~~d~~s~~~~~~  190 (191)
T d1zara2         142 WIIDFPQSVEVGEEGWR---------EILERDVRNIITYF-SRTYRTEKDINSAIDRIL  190 (191)
T ss_dssp             EECCCTTCEETTSTTHH---------HHHHHHHHHHHHHH-HHHHCCCCCHHHHHHHHH
T ss_pred             EEEECCCcccCCCCCcH---------HHHHHHHHHHHHHH-cCCCCCcccHHHHHHHHh
Confidence            99999999765432111         1111      1111 356788999999765443

>d2a6za1 b.29.1.13 (A:7-227) Emp47p N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Lectin leg-like
domain: Emp47p N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.84  E-value=1.3e-20  Score=182.51  Aligned_cols=196  Identities=12%  Similarity=0.100  Sum_probs=126.2

Q ss_pred             EEeCCCC-----CCCeEEecceEecCCCcEEecCCCCCceEEEEcCCCeecccCCCCceeeeEEEEEEEEecCCCCCCCC
Q 048419           11 FLYNGFL-----HANLSLEGAAYISTSGILTVTNKSEGLIGHALYPNPLRFKTSNKSVAIDFRTNFVFSILPKYPDLGGQ   85 (653)
Q Consensus        11 f~~~~f~-----~~~l~~~g~a~~~~~g~l~Lt~~~~~~~Gr~~y~~pi~~~~~~~~~~~sF~t~F~f~i~~~~~~~~gd   85 (653)
                      |++|.+.     ..+..+.|+|.+. +|.|+||++ .++.|.+|++.||++++.       |+++|+|.|... ...+||
T Consensus        10 ~s~p~~~~~~~~~~~W~~~g~a~~~-~~~i~LTp~-~~~~G~~w~~~~i~~~~~-------f~~~~~F~i~g~-~~~ggd   79 (221)
T d2a6za1          10 YSLPDLINTRKVPNNWQTGEQASLE-EGRIVLTSN-QNSKGSLWLKQGFDLKDS-------FTMEWTFRSVGY-SGQTDG   79 (221)
T ss_dssp             GCBCCCTTCCSCCTTEEEEETCEEE-TTEEESCCS-TTCEEEEEESSCEECCSC-------EEEEEEEEEESC-CSCCSC
T ss_pred             ccCCCccccccCCCccEEcceeEEE-CCEEEECCC-CCCceEEEECCccccCCC-------eEEEEEEEEeCC-CCCCCC
Confidence            6777662     2579999999987 899999987 578899999999999754       999999999864 345899


Q ss_pred             ceEEEEecCCCCCCCCCCccccCCCcccCCCCCCCCceEEEEeecccccccCCCCCCeeeEecCCCCcCCcccCccccCC
Q 048419           86 GLAFIIISTNRPENCLANQFLGLPNITMSSSTKFSTRMLAVEFDIIQNTELIDINDNHVGIDISSLISSASEPASYYSGN  165 (653)
Q Consensus        86 GlaF~l~~~~~~~~~~~g~~lG~~~~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~~~Hvgid~ns~~s~~~~~~~~~~~~  165 (653)
                      ||||++++....  ...|+++|..+.-+.         +||||||+.|.    ....|+.++.++..-.......  . .
T Consensus        80 G~af~~~~~~~~--~~~g~~~G~~~~~~G---------laV~fDt~~n~----~~~~~~~~ndgt~~~~~~~~~~--~-~  141 (221)
T d2a6za1          80 GISFWFVQDSNI--PRDKQLYNGPVNYDG---------LQLLVDNNGPL----GPTLRGQLNDGQKPVDKTKIYD--Q-S  141 (221)
T ss_dssp             EEEEEEEECSSS--CCCCTBTTBCTTCEE---------EEEEEESCSTT----SSEEEEEEEESSSCCCGGGHHH--H-C
T ss_pred             cEEEEEEcCCCc--cccccccccCCCCce---------EEEEEECCCCC----CCceEEEecCCCccccccCCcc--c-c
Confidence            999999975432  234455565443222         89999999873    2222333333332211111100  0 0


Q ss_pred             CCccccc-cCCCCceEEEEEecCCce-EEEEEEeeCCCCCCCCCceeeeecCCcccccceEEeEecccCcccceeeecce
Q 048419          166 NHRIPIL-LRSGDPIQAWVDYSSQEM-LINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLITASHNVHGW  243 (653)
Q Consensus       166 ~~~~~~~-l~~g~~~~~~I~Y~~~~~-~l~v~~~~~~~~~~~~~~l~~~~dL~~~l~~~~~vGFsastg~~~~~~~i~sW  243 (653)
                      .+...+. ..++...+++|.|++.++ .|.|.+...        +. ..++--.+-++++|+||||+||...+.|.++.+
T Consensus       142 ~~~~~~~~~~~~~~~~~~I~y~~~~~~~l~v~id~~--------~c-~~~~~v~lp~~~~~fG~SA~TG~~~~~hd~~~i  212 (221)
T d2a6za1         142 FASCLMGYQDSSVPSTIRVTYDLEDDNLLKVQVDNK--------VC-FQTRKVRFPSGSYRIGVTAQNGAVNNNAESFEI  212 (221)
T ss_dssp             SEEEECCCTTEEEEEEEEEEEEGGGTSEEEEEETTE--------EE-EEESCCCCCSSEEEEEEEEECCSGGGCCCEEEE
T ss_pred             cceeeecccCCCCCEEEEEEEecCccceEEEEecCc--------Ee-EEECCeecCCCCEEEEEEEccCCccCCCceEEE
Confidence            0111222 235777899999986554 477776321        11 112211122567899999999998888886543

>d2a6va1 b.29.1.13 (A:9-226) Emp46p N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Lectin leg-like
domain: Emp46p N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.83  E-value=5.4e-20  Score=177.35  Aligned_cols=189  Identities=13%  Similarity=0.106  Sum_probs=127.7

Q ss_pred             CCeEEecceEecCCCcEEecCCCCCceEEEEcCCCeecccCCCCceeeeEEEEEEEEecCCCCCCCCceEEEEecCCCCC
Q 048419           19 ANLSLEGAAYISTSGILTVTNKSEGLIGHALYPNPLRFKTSNKSVAIDFRTNFVFSILPKYPDLGGQGLAFIIISTNRPE   98 (653)
Q Consensus        19 ~~l~~~g~a~~~~~g~l~Lt~~~~~~~Gr~~y~~pi~~~~~~~~~~~sF~t~F~f~i~~~~~~~~gdGlaF~l~~~~~~~   98 (653)
                      .+..+.|+|.+. +|.|+||++ .++.|++|+..||++++.       |+++|+|.|... ...+||||||++++.....
T Consensus        22 ~~W~~~G~~~~~-~~~i~LTp~-~~~~G~~w~~~~i~~~~~-------f~i~~~F~i~g~-~~~~~dG~afw~~~~~~~~   91 (218)
T d2a6va1          22 SQWTLGDKVKLE-EGRFVLTPG-KNTKGSLWLKPEYSIKDA-------MTIEWTFRSFGF-RGSTKGGLAFWLKQGNEGD   91 (218)
T ss_dssp             TTEEEEETCEEE-TTEEESCCS-TTCEEEEEESSCBCCSSC-------EEEEEEEEEESC-CSCCSCEEEEEEECSCCCC
T ss_pred             CccEECCCEEEE-CCEEEECCC-CCCeeEEEeCCccccccc-------ceEEEEEEEeCC-CCCCCCcEEEEEEcCCccc
Confidence            689999999986 899999998 467899999999999854       999999999864 3558999999999754322


Q ss_pred             CCCCCccccCCCcccCCCCCCCCceEEEEeecccccccCCCCCCeeeEecCCCCcCCcccCccccCC-CCcccc-ccCCC
Q 048419           99 NCLANQFLGLPNITMSSSTKFSTRMLAVEFDIIQNTELIDINDNHVGIDISSLISSASEPASYYSGN-NHRIPI-LLRSG  176 (653)
Q Consensus        99 ~~~~g~~lG~~~~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~~~Hvgid~ns~~s~~~~~~~~~~~~-~~~~~~-~l~~g  176 (653)
                      .  .++..|..+.-+.         +||||||+.|.      .+||.+.+|.=.    .+.....+. .+...+ ...++
T Consensus        92 ~--~~~~~G~~~~f~G---------laV~fDt~~n~------~~~i~~~~ndGs----~~~~~~~d~~~g~c~~~~~~~~  150 (218)
T d2a6va1          92 S--TELFGGSSKKFNG---------LMILLRLDDKL------GESVTAYLNDGT----KDLDIESSPYFASCLFQYQDSM  150 (218)
T ss_dssp             C--CTBTTTBCSSCEE---------EEEEEEEETTT------EEEEEEEEEESS----SCCCTTTSCCSEEEECCCSSCS
T ss_pred             C--CCcccccCCCcce---------EEEEEECCCCC------CCeEEEEeCCCC----ccccccCCcccceEEecccCCC
Confidence            1  2222333222122         89999999874      368888765311    111000010 011111 23467


Q ss_pred             CceEEEEEecCCce-EEEEEEeeCCCCCCCCCceeeeecCCcccccceEEeEecccCcccceeeecceeee
Q 048419          177 DPIQAWVDYSSQEM-LINVSICPLGVPKPYRPLISLPIDLSSVIDEYMYTGFSASTGLITASHNVHGWSIS  246 (653)
Q Consensus       177 ~~~~~~I~Y~~~~~-~l~v~~~~~~~~~~~~~~l~~~~dL~~~l~~~~~vGFsastg~~~~~~~i~sWsf~  246 (653)
                      ...+++|.|++.+. .+.|.+.  +.    ..+-...|+|  ..++++|+||||+||...+.|.|++|++.
T Consensus       151 ~~~~~~i~Y~~~~~~~l~v~id--~~----~c~~t~~i~l--p~~~~~yfG~SA~Tg~~~d~~dIls~~~~  213 (218)
T d2a6va1         151 VPSTLRLTYNPLDNHLLKLQMD--NR----VCFQTRKVKF--MGSSPFRIGTSAINDASKESFEILKMKLY  213 (218)
T ss_dssp             SCEEEEEEEEGGGTSEEEEEET--TE----EEEEESCCCG--GGTSCBEEEEEEECCTTCCEEEEEEEEEE
T ss_pred             CcEEEEEEEECcccceEEEEeC--Cc----EEEEECCeec--CCCCcEEEEEEECCCCCcCcEEEEEEEEE
Confidence            88999999987653 4677653  11    1111222333  24577999999999999999999999985

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=98.48  E-value=3.5e-07  Score=88.98  Aligned_cols=150  Identities=15%  Similarity=0.036  Sum_probs=100.7

Q ss_pred             HHHHHhhcCcCcceeeeeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcC-CCceeeeeeeecccce
Q 048419          323 AELASVTKGFGEQNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLR-HRNLVQLHGWCRKQDE  401 (653)
Q Consensus       323 ~el~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~  401 (653)
                      .|++..-..|+..+..+.+..+.||+...  ++..+.||+...........+.+|...+..|. +--+.+++.++...+.
T Consensus         7 ~~l~~~~~~~~~~~~~~G~s~~~v~rv~~--~~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~   84 (263)
T d1j7la_           7 PELKKLIEKYRCVKDTEGMSPAKVYKLVG--ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGW   84 (263)
T ss_dssp             HHHHHHHTTSEEEECSCCCSSSEEEEEEC--SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTE
T ss_pred             HHHHHhhhceEEEEcCCCCCCCcEEEEEe--CCCeEEEEEcCCCcccchhhHHHHHHHHHHHhccCCCCcEEEEEecCCc
Confidence            35555556666655544444578998764  46678899886554444445678888887774 4346777888888888


Q ss_pred             eEEEEeccCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhc------------------------------
Q 048419          402 LLLVYDYVPNGSLDKLLFDKDHKLRKLLTWDQRYKILIGIAQSLLYLHEE------------------------------  451 (653)
Q Consensus       402 ~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~------------------------------  451 (653)
                      .++||+++++.++.+....          .....+++.++++.+..||+.                              
T Consensus        85 ~~lv~~~l~G~~~~~~~~~----------~~~~~~~~~~l~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (263)
T d1j7la_          85 SNLLMSEADGVLCSEEYED----------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVD  154 (263)
T ss_dssp             EEEEEECCSSEEHHHHTTT----------CSCHHHHHHHHHHHHHHHHTSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCC
T ss_pred             eEEEEEecccccccccccc----------cccHHHHHHHHHHHHHHHhccCccccccCcchhhhhhhHHHHHHHHhhhhh
Confidence            9999999999877554321          112233444555555555531                              


Q ss_pred             -----------------------C---CCCeEecCCCCCcEEEcCCCcEEEEeecCccc
Q 048419          452 -----------------------C---NQRVVHRDVKPSNILLDTYLNAKLGDFGLAKI  484 (653)
Q Consensus       452 -----------------------~---~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~  484 (653)
                                             .   ...++|+|+.|.|||++++..+-|+||+.+..
T Consensus       155 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDwe~a~~  213 (263)
T d1j7la_         155 CENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR  213 (263)
T ss_dssp             GGGGSTTCSCSSHHHHHHHHHHSCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred             hhcccccccchHHHHHHHHHHhcCCcCCcEEEEeeccCcceeecCCceEEEeechhccc
Confidence                                   1   12379999999999999877677999987753

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=97.70  E-value=4.9e-05  Score=72.78  Aligned_cols=76  Identities=14%  Similarity=0.041  Sum_probs=52.8

Q ss_pred             eeeeeCc-EEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCC--CceeeeeeeecccceeEEEEeccCCCC
Q 048419          337 LVGSGGF-GRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRH--RNLVQLHGWCRKQDELLLVYDYVPNGS  413 (653)
Q Consensus       337 ~LG~G~f-g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H--~niv~l~g~~~~~~~~~lV~E~~~~gs  413 (653)
                      .+..|.. +.||+....+ +..+++|.......   ..+..|...++.|..  -.+.+++.++.+.+..++|||+++|.+
T Consensus        17 ~~~~G~s~~~v~r~~~~~-~~~~vlK~~~~~~~---~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~G~~   92 (255)
T d1nd4a_          17 QQTIGCSDAAVFRLSAQG-RPVLFVKTDLSGAL---NELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQD   92 (255)
T ss_dssp             ECSCTTSSCEEEEEECTT-SCCEEEEEECSCTT---SCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEE
T ss_pred             EcCCcccCCeEEEEEeCC-CCEEEEEeCCccCH---hHHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEeeeccc
Confidence            4445543 6899988754 66788898754432   245677777777743  335667888888888999999998876


Q ss_pred             chh
Q 048419          414 LDK  416 (653)
Q Consensus       414 L~~  416 (653)
                      +.+
T Consensus        93 ~~~   95 (255)
T d1nd4a_          93 LLS   95 (255)
T ss_dssp             TTT
T ss_pred             ccc
Confidence            644

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=97.53  E-value=0.00014  Score=74.48  Aligned_cols=78  Identities=12%  Similarity=0.042  Sum_probs=48.9

Q ss_pred             ceeeeeeCcEEEEEEEeCCCCcEEEEEEeccC-------chhhHHHHHHHHHHHhhcC-C--CceeeeeeeecccceeEE
Q 048419          335 QNLVGSGGFGRVYRGLMPSLGLEVAIKRIGHN-------SQQGMKEFVAEIMSMGRLR-H--RNLVQLHGWCRKQDELLL  404 (653)
Q Consensus       335 ~~~LG~G~fg~Vy~~~~~~~~~~vavK~~~~~-------~~~~~~~~~~E~~~l~~l~-H--~niv~l~g~~~~~~~~~l  404 (653)
                      .+.||.|....||+.....+++.++||.-...       -+........|.+.|+.+. +  ..+.+++.+.  .+..++
T Consensus        31 ~~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~d--~~~~~l  108 (392)
T d2pula1          31 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD--TEMAVT  108 (392)
T ss_dssp             EEECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEE--TTTTEE
T ss_pred             EEEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEEEc--CCCCEE
Confidence            45789999999999998777888999975321       1112233456777777663 2  3455666554  344578


Q ss_pred             EEeccCCCCc
Q 048419          405 VYDYVPNGSL  414 (653)
Q Consensus       405 V~E~~~~gsL  414 (653)
                      |||++++..+
T Consensus       109 vmE~L~~~~~  118 (392)
T d2pula1         109 VMEDLSHLKI  118 (392)
T ss_dssp             EECCCTTSEE
T ss_pred             EEeccCCccc
Confidence            9999977543

>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Choline kinase
domain: Choline kinase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.45  E-value=0.0061  Score=61.85  Aligned_cols=75  Identities=17%  Similarity=0.178  Sum_probs=50.5

Q ss_pred             ceeeeeeCcEEEEEEEeCC-------CCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCce-eeeeeeecccceeEEEE
Q 048419          335 QNLVGSGGFGRVYRGLMPS-------LGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNL-VQLHGWCRKQDELLLVY  406 (653)
Q Consensus       335 ~~~LG~G~fg~Vy~~~~~~-------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~g~~~~~~~~~lV~  406 (653)
                      .+.|+.|-.=.+|++....       ....|.+++....  .......+|..+++.+.-.++ .++++++.+    .+|+
T Consensus        47 v~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g~~--~~~idr~~E~~i~~~ls~~gl~Pkll~~~~~----g~I~  120 (395)
T d1nw1a_          47 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLE  120 (395)
T ss_dssp             EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEE
T ss_pred             EEEcCCccccceEEEEeCCCCccccCCCCcEEEEecCCc--chhhHHHHHHHHHHHHHhCCCCCeEEEEcCC----ceEE
Confidence            4578888888999998653       2356777776532  223345678888888853344 467777653    5799


Q ss_pred             eccCCCCch
Q 048419          407 DYVPNGSLD  415 (653)
Q Consensus       407 E~~~~gsL~  415 (653)
                      ||+++..|.
T Consensus       121 efi~g~~l~  129 (395)
T d1nw1a_         121 EYIPSRPLS  129 (395)
T ss_dssp             CCCCEEECC
T ss_pred             EEeccccCC
Confidence            999875553

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=96.18  E-value=0.0058  Score=60.26  Aligned_cols=137  Identities=13%  Similarity=0.055  Sum_probs=76.9

Q ss_pred             EEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCce--eeeee-----eecccceeEEEEeccCCCCchh
Q 048419          344 GRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRNL--VQLHG-----WCRKQDELLLVYDYVPNGSLDK  416 (653)
Q Consensus       344 g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~ni--v~l~g-----~~~~~~~~~lV~E~~~~gsL~~  416 (653)
                      -.||++... +|..+++|+.+... ...+++..|...+..|....+  +..+.     .....+..+.++++++|..+..
T Consensus        36 N~vy~v~~~-dg~~~VlK~~rp~~-~s~~~i~~E~~~l~~L~~~gipv~~p~~~~g~~~~~~~~~~~~l~~~~~G~~~~~  113 (325)
T d1zyla1          36 NRVYQFQDE-DRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGGRQFEA  113 (325)
T ss_dssp             SEEEEECCT-TCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCCEECCS
T ss_pred             ceeEEEEcC-CCCEEEEEEeCCCC-CCHHHHHHHHHHHHHHHhcCCCCCCceecCCCeeeeeeeEEEEEEeecCCcCCCC
Confidence            489999875 48889999986442 234567778888887753322  11111     1233456788999998754321


Q ss_pred             ----hhh----------c----ccccccccch-------------------hhhHHHHHHHHHHHHHHHHh----cCCCC
Q 048419          417 ----LLF----------D----KDHKLRKLLT-------------------WDQRYKILIGIAQSLLYLHE----ECNQR  455 (653)
Q Consensus       417 ----~l~----------~----~~~~~~~~l~-------------------~~~~~~i~~~ia~~L~yLH~----~~~~~  455 (653)
                          .+.          .    .....+..++                   ...+..+...+.+.+..+..    ....+
T Consensus       114 ~~~~~~~~lG~~LA~lH~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~p~~  193 (325)
T d1zyla1         114 DNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWREDFTVL  193 (325)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHCCSCSCCE
T ss_pred             CCHHHHHHHHHHHHHHHhhcccCCccccCCCCHHHHhhhhHHHHHHcCcCCHHHHHHHHHHHHHHHHHHHHhccccCCce
Confidence                010          0    0000011111                   11111222223333333332    23467


Q ss_pred             eEecCCCCCcEEEcCCCcEEEEeecCccc
Q 048419          456 VVHRDVKPSNILLDTYLNAKLGDFGLAKI  484 (653)
Q Consensus       456 ivH~Dlkp~NIll~~~~~~kl~DfGla~~  484 (653)
                      +||+|+.+.|||++++  ..++||+-+..
T Consensus       194 liHgDlh~~NvL~~~~--~~~IDFdd~~~  220 (325)
T d1zyla1         194 RLHGDCHAGNILWRDG--PMFVDLDDARN  220 (325)
T ss_dssp             ECCSSCSGGGEEESSS--EEECCCTTCCE
T ss_pred             eecCCCCcccEEEeCC--ceEEechhccc
Confidence            9999999999999743  45899998764

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=95.79  E-value=0.048  Score=52.86  Aligned_cols=161  Identities=11%  Similarity=-0.006  Sum_probs=83.7

Q ss_pred             cCHHHHHHhhcCcCcceee-----eeeCcEEEEEEEeCCCCcEEEEEEeccCchhhHHHHHHHHHHHhhcCCCc-----e
Q 048419          320 FKYAELASVTKGFGEQNLV-----GSGGFGRVYRGLMPSLGLEVAIKRIGHNSQQGMKEFVAEIMSMGRLRHRN-----L  389 (653)
Q Consensus       320 f~~~el~~at~~f~~~~~L-----G~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n-----i  389 (653)
                      .+.+|++..-+.|...++.     ..|---+.|+....+ | .+++|+.....  ..++...|+.++..|...+     .
T Consensus         3 ls~~el~~~l~~Y~lg~~~~~~~i~~G~~N~ny~v~t~~-g-~yVLri~~~~~--~~~~l~~~~~~l~~L~~~g~pvp~p   78 (316)
T d2ppqa1           3 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTK-D-PLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPLP   78 (316)
T ss_dssp             CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESS-C-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCB
T ss_pred             CCHHHHHHHHHhCCCCCceEeecCCCCcccCeEEEEECC-C-cEEEEEcCCCC--CHHHHHHHHHHHHhhhhcccccccc
Confidence            5667888888888664443     345556789988753 4 59999985431  1233445666666664322     1


Q ss_pred             eeee-e--eecccceeEEEEeccCCCCchhhhhcc--------------------ccccccc----------------ch
Q 048419          390 VQLH-G--WCRKQDELLLVYDYVPNGSLDKLLFDK--------------------DHKLRKL----------------LT  430 (653)
Q Consensus       390 v~l~-g--~~~~~~~~~lV~E~~~~gsL~~~l~~~--------------------~~~~~~~----------------l~  430 (653)
                      +... |  +.........++.+..+......-...                    .......                ..
T Consensus        79 i~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (316)
T d2ppqa1          79 LPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEV  158 (316)
T ss_dssp             CCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGT
T ss_pred             ceecCCCcceeeecccceeeeecccccccccchhHHHHHHHHHHhhhhhhhhcccccccccchhhcchhhhHHHHhhhhc
Confidence            1111 1  111233456667666654332211000                    0000000                00


Q ss_pred             hhhHHHHHHHHHHHHHHHH-hcCCCCeEecCCCCCcEEEcCCCcEEEEeecCccc
Q 048419          431 WDQRYKILIGIAQSLLYLH-EECNQRVVHRDVKPSNILLDTYLNAKLGDFGLAKI  484 (653)
Q Consensus       431 ~~~~~~i~~~ia~~L~yLH-~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~  484 (653)
                      .......+..+...+.-.+ ...+.++||+|+.++||+++.+...-|.||+.+..
T Consensus       159 ~~~~~~~l~~~~~~~~~~~~~~L~~giIHgDl~~dNvl~~~~~v~gvIDF~~~~~  213 (316)
T d2ppqa1         159 EKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN  213 (316)
T ss_dssp             STTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             chhHHHHHHHHHHhhhccCccccccccccCCcchhhhhcccccceeEeccccccc
Confidence            0111122222222222222 13457899999999999999888778999998763