Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>048427
LVHSYIVTGSLTYCVAIGENFEDRRDSILFYLSTLNRDLALRVDEPAKPTDKSTAVEKAE
TTRDNIPACDKAKDYLAAVGRTFKKIDKAEKGNYLRLLANTQYDGVSGVREHILKMTSYH
KKLKEMDVDLPDDYLVFQNLESLPPQFGNLRSQYNTQRDTWNITELTAYVVQEEESLKKG
KSHTAIMATTQESGSVKKCSSKGSNKFFKKKKFGKKTSRGNSSTTSSSTSESFKRKCHFC
KKLGHKRELNAGDSKHGWKRK

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  048427
        (261 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2164032 - symbol:AT5G53670 "AT5G53670" species...   109  0.00044   1


>TAIR|locus:2164032 [details] [associations]
            symbol:AT5G53670 "AT5G53670" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] EMBL:CP002688 EMBL:AB017066
            EMBL:DQ447071 IPI:IPI00533494 RefSeq:NP_200178.1 UniGene:At.55529
            EnsemblPlants:AT5G53670.1 GeneID:835448 KEGG:ath:AT5G53670
            TAIR:At5g53670 InParanoid:Q9FI09 OMA:NPANITA PhylomeDB:Q9FI09
            ArrayExpress:Q9FI09 Genevestigator:Q9FI09 Uniprot:Q9FI09
        Length = 244

 Score = 109 (43.4 bits), Expect = 0.00044, P = 0.00044
 Identities = 39/154 (25%), Positives = 75/154 (48%)

Query:    18 GENFEDRRDSILFYLSTLNRDLALRVDEPAKPT-----DKSTAVE----KAETT---RDN 65
             G NF + ++ +L  L+ ++ DL+L  + P+ P      D+S  V     K       R  
Sbjct:    43 GSNFSEWKEHLLLVLALMDLDLSLMTERPSSPKELKHWDRSNRVSIMIMKIRIPQGFRGV 102

Query:    66 IPA-CDKAKDYLAAVGRTFKKIDKAEKGNYLRLLANTQYDGVSGVREHILKMTSYHKKLK 124
             +P     AKD+LA++   F K ++AE+       ++  Y     VRE I++M +   K K
Sbjct:   103 VPDDVTTAKDFLASLENFFAKNEEAERSRVQAESSSMSYIENENVRELIMRMKTLGAKRK 162

Query:   125 EMDVD--LPDDYLVFQ-NLESLPPQFGNLRSQYN 155
              + ++    +D ++    ++ LP Q+ +L++ Y+
Sbjct:   163 RLGINNIFSNDMMLAHCAVKMLPLQYISLKNVYS 196


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.316   0.132   0.385    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      261       221   0.00095  112 3  11 22  0.41    33
                                                     32  0.40    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  597 (63 KB)
  Total size of DFA:  179 KB (2104 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  20.05u 0.16s 20.21t   Elapsed:  00:00:01
  Total cpu time:  20.05u 0.16s 20.21t   Elapsed:  00:00:01
  Start:  Sat May 11 02:30:13 2013   End:  Sat May 11 02:30:14 2013

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