Query 048429
Match_columns 192
No_of_seqs 127 out of 711
Neff 5.5
Searched_HMMs 29240
Date Mon Mar 25 16:22:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048429.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/048429hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ong_A 4S-limonene synthase; m 100.0 8.6E-68 3E-72 495.1 18.8 187 4-192 27-243 (543)
2 3g4d_A (+)-delta-cadinene synt 100.0 2.2E-67 7.4E-72 493.6 19.8 189 3-192 45-254 (554)
3 3n0f_A Isoprene synthase; terp 100.0 1.2E-67 4.2E-72 495.5 18.0 188 3-192 39-252 (555)
4 3m00_A Aristolochene synthase; 100.0 2.4E-67 8.3E-72 493.0 20.0 189 3-192 41-250 (550)
5 2j5c_A 1,8-cineole synthase; t 100.0 1.6E-67 5.5E-72 495.9 16.3 187 4-192 60-270 (569)
6 1n1b_A (+)-bornyl diphosphate 100.0 3.9E-67 1.3E-71 491.5 17.8 187 4-192 31-249 (549)
7 3p5p_A Taxadiene synthase; cla 100.0 5.7E-58 2E-62 442.8 16.0 167 25-192 243-457 (764)
8 3s9v_A Abietadiene synthase, c 100.0 1.1E-57 3.9E-62 441.7 16.4 167 25-192 267-486 (785)
9 3sdr_A Alpha-bisabolene syntha 100.0 1.2E-57 4.1E-62 443.0 15.7 181 10-192 276-514 (817)
10 3pya_A ENT-copalyl diphosphate 100.0 1.9E-56 6.6E-61 429.8 17.9 186 5-192 218-461 (727)
11 1pd3_A Nonstructural protein N 47.5 25 0.00086 23.0 3.9 32 9-41 17-48 (58)
12 2kng_A Protein LSR2; DNA-bindi 34.5 24 0.00082 23.2 2.3 28 58-101 22-49 (55)
13 1tzy_D Histone H4-VI; histone- 22.4 63 0.0022 23.1 2.9 40 55-117 36-76 (103)
14 2yfw_B Histone H4, H4; cell cy 22.1 65 0.0022 23.1 2.9 40 55-117 36-76 (103)
15 2j6y_A Phosphoserine phosphata 20.2 93 0.0032 23.1 3.5 35 85-123 8-42 (111)
No 1
>2ong_A 4S-limonene synthase; monoterpene synthase, monoterpene cyclase, geranyl diphosphate, 2 fluorogeranyl diphosphate linalyl diphosphate; HET: FPG BTB; 2.70A {Mentha spicata} PDB: 2onh_A*
Probab=100.00 E-value=8.6e-68 Score=495.14 Aligned_cols=187 Identities=31% Similarity=0.510 Sum_probs=177.9
Q ss_pred hhhHHHHHHHHHHHHHHhhCCCcChhhhHHHHHHHHHhC----C--------------C----------CCChhhHHHHH
Q 048429 4 TIDQDEFEALKQKIKNMLISPTDKSFQKLSLIDAVQRLG----Y--------------D----------GNDVHTVALRF 55 (192)
Q Consensus 4 ~~~~~~~e~Lk~evr~~l~~~~~d~~~~L~lID~lqRLG----f--------------~----------~~dL~~~AL~F 55 (192)
+.+++++++||++||+|+.+ ..|++++|+|||+||||| | | ..|||+|||+|
T Consensus 27 ~~~~~~~~~Lk~~V~~~~~~-~~d~~~~l~liD~lqrLGi~~hF~~EI~~~L~~i~~~~~~~~~~~~~~~~dl~~~al~F 105 (543)
T 2ong_A 27 DKHVIRASELVTLVKMELEK-ETDQIRQLELIDDLQRMGLSDHFQNEFKEILSSIYLDHHYYKNPFPKEERDLYSTSLAF 105 (543)
T ss_dssp THHHHHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHTTGGGTTHHHHHHHHHHHHHTTTCCCSSCCCCCCCHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhc-ccCHHHHHHHHHHHHhCCchhhhHHHHHHHHHHHHHhhcccccccccccCCHHHHHHHH
Confidence 56899999999999999986 458999999999999999 3 2 14999999999
Q ss_pred HHHhhcCcccccccccccccccCcccccchhhHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHhhhc-c-CCchHHH
Q 048429 56 RLLRQQGYRISCDIFGGFKDDRGKFKVSLINDLTGMLSLYEAAHLRIRGEDILDEAVAFTTSHLESMVTQ-V-SPQLSDE 133 (192)
Q Consensus 56 RLLRqhGy~VS~DvF~~F~d~~G~F~~~l~~dv~glL~LYeAS~l~~~gE~iLdeA~~Ft~~~L~~~~~~-~-~~~l~~~ 133 (192)
||||||||+||||||++|+|++|+|++++++||+|||+|||||||++|||+|||+|+.||++||++.+++ + +++|+++
T Consensus 106 RlLR~hGy~vs~dvf~~Fk~~~g~F~~~l~~d~~glL~Ly~As~l~~~gE~iL~eA~~Ft~~~L~~~~~~~~~~~~l~~~ 185 (543)
T 2ong_A 106 RLLREHGFQVAQEVFDSFKNEEGEFKESLSDDTRGLLQLYEASFLLTEGETTLESAREFATKFLEEKVNEGGVDGDLLTR 185 (543)
T ss_dssp HHHHHTTCCCCGGGGGGGBCTTSSBCTTGGGCHHHHHHHHHHHTTCCSSCHHHHHHHHHHHHHHHHHHHSSCSSSHHHHH
T ss_pred HHHHHcCCCccHHHHhcccCCCCCccchhhhccHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhccCCCCcHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999886 5 7899999
Q ss_pred HHHhcCCCccCCchhHHHhhhhhhcccCCCCChHHHHHHHHhhhHHHHHHhHHHhhhcC
Q 048429 134 ILHALNRPIRRGLPRLEAIYYIDLYSQDDSKDKAILLKFAKLDFSMLQVIHRKELSIIT 192 (192)
Q Consensus 134 V~~aL~~P~~~~l~Rlear~yI~~y~~~~~~n~~~lLeLAklDFn~~Qs~hq~EL~~ls 192 (192)
|++||++|||+++||+|||+||+.|++++++|+. ||||||+|||+||++||+||++++
T Consensus 186 V~~aL~~P~~~~l~rlear~yI~~Y~~~~~~n~~-lLelAkldFn~~Q~~hq~El~~l~ 243 (543)
T 2ong_A 186 IAYSLDIPLHWRIKRPNAPVWIEWYRKRPDMNPV-VLELAILDLNIVQAQFQEELKESF 243 (543)
T ss_dssp HHHHHHSCTTTSCSTTTHHHHHHHHHTCSSCCHH-HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhhHhccchHHHHHHHHHHhccCccccHH-HHHHHHHhHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999 999999999999999999999874
No 2
>3g4d_A (+)-delta-cadinene synthase isozyme XC1; cyclase, lyase, magnesium, metal-binding; 2.40A {Gossypium arboreum} PDB: 3g4f_A*
Probab=100.00 E-value=2.2e-67 Score=493.65 Aligned_cols=189 Identities=51% Similarity=0.889 Sum_probs=179.5
Q ss_pred chhhHHHHHHHHHHHHHHhhCCCcChhhhHHHHHHHHHhC----C---------------C--CCChhhHHHHHHHHhhc
Q 048429 3 ATIDQDEFEALKQKIKNMLISPTDKSFQKLSLIDAVQRLG----Y---------------D--GNDVHTVALRFRLLRQQ 61 (192)
Q Consensus 3 ~~~~~~~~e~Lk~evr~~l~~~~~d~~~~L~lID~lqRLG----f---------------~--~~dL~~~AL~FRLLRqh 61 (192)
.+.+.+|+++||++||+||.....|++++|+|||+||||| | + ..|||+|||+|||||||
T Consensus 45 ~~~~~~~~e~Lk~eVr~~l~~~~~~~~~~l~lID~lqrLGi~~hF~~EI~~~L~~i~~~~~~~~~dl~~~al~FRlLR~h 124 (554)
T 3g4d_A 45 DAETEKRHQQLKEEVRKMIVAPMANSTQKLAFIDSVQRLGVSYHFTKEIEDELENIYHNNNDAENDLYTTSIRFRLLREH 124 (554)
T ss_dssp CHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHHHHHHHTTCGGGCHHHHHHHHHHHHHSCCCTTCCHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHcCchhhhHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhc
Confidence 4678999999999999999754579999999999999999 4 0 15999999999999999
Q ss_pred CcccccccccccccccCcccccchhhHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHhhhccCCchHHHHHHhcCCC
Q 048429 62 GYRISCDIFGGFKDDRGKFKVSLINDLTGMLSLYEAAHLRIRGEDILDEAVAFTTSHLESMVTQVSPQLSDEILHALNRP 141 (192)
Q Consensus 62 Gy~VS~DvF~~F~d~~G~F~~~l~~dv~glL~LYeAS~l~~~gE~iLdeA~~Ft~~~L~~~~~~~~~~l~~~V~~aL~~P 141 (192)
||+||||||++|+|++|+|++++.+|++|||+||||||+++|||+|||+|+.||++||++.++.++++|+++|.|||++|
T Consensus 125 Gy~VS~dvf~~F~~~~g~F~~~l~~d~~glL~LYeAs~l~~~gE~iLdeA~~fs~~~L~~~~~~~~~~l~~~V~~aL~~P 204 (554)
T 3g4d_A 125 GYNVSCDVFNKFKDEQGNFKSSVTSDVRGLLELYQASYLRVHGEDILDEAISFTTHHLSLAVASLDHPLSEEVSHALKQS 204 (554)
T ss_dssp TCCCCGGGGGGGBCTTSSBCHHHHHCHHHHHHHHHHHTTCCTTCHHHHHHHHHHHHHHHHHSTTCCTTHHHHHHHHHHCC
T ss_pred CCCCChhHHhhhcccCCCcccccccchHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHhccCchHHHHHHHHhCCC
Confidence 99999999999999999999999999999999999999999999999999999999999998878889999999999999
Q ss_pred ccCCchhHHHhhhhhhcccCCCCChHHHHHHHHhhhHHHHHHhHHHhhhcC
Q 048429 142 IRRGLPRLEAIYYIDLYSQDDSKDKAILLKFAKLDFSMLQVIHRKELSIIT 192 (192)
Q Consensus 142 ~~~~l~Rlear~yI~~y~~~~~~n~~~lLeLAklDFn~~Qs~hq~EL~~ls 192 (192)
||+++||+||||||+.|++++++|+. ||+|||+|||+||++||+||+++|
T Consensus 205 ~~~~l~rlear~yI~~Y~~~~~~n~~-lLelAkldFn~~Q~~hq~El~~l~ 254 (554)
T 3g4d_A 205 IRRGLPRVEARHYLSVYQDIESHNKA-LLEFAKIDFNMLQFLHRKELSEIC 254 (554)
T ss_dssp TTTSCHHHHHHHHHHHHHSSTTCCHH-HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCchHHHHHHHHHHhCcCccccHH-HHHHHHHHHHHHHHHhHHHHHHHH
Confidence 99999999999999999999999999 999999999999999999999874
No 3
>3n0f_A Isoprene synthase; terpene cyclase fold, hemiterpene synthase, DDXXD motif, NSE motif, lyase; 2.70A {Populus tremula x populus alba} PDB: 3n0g_A*
Probab=100.00 E-value=1.2e-67 Score=495.46 Aligned_cols=188 Identities=37% Similarity=0.672 Sum_probs=177.8
Q ss_pred chhhHHHHHHHHHHHHHHhhCCCc-ChhhhHHHHHHHHHhC----C-------------C-------CCChhhHHHHHHH
Q 048429 3 ATIDQDEFEALKQKIKNMLISPTD-KSFQKLSLIDAVQRLG----Y-------------D-------GNDVHTVALRFRL 57 (192)
Q Consensus 3 ~~~~~~~~e~Lk~evr~~l~~~~~-d~~~~L~lID~lqRLG----f-------------~-------~~dL~~~AL~FRL 57 (192)
.+.+++|+++||++||+||.. .. +++++|+|||+||||| | . ..||++|||+|||
T Consensus 39 ~~~~~~~~e~Lk~eVr~~l~~-~~~~~~~~L~lID~lqRLGi~~hF~~EI~~~L~~i~~~~~~~~~~~~DL~~~Al~FRL 117 (555)
T 3n0f_A 39 IEVYKDKAKKLEAEVRREINN-EKAEFLTLLELIDNVQRLGLGYRFESDIRRALDRFVSSGGFDGVTKTSLHATALSFRL 117 (555)
T ss_dssp CHHHHHHHHHHHHHHHHHHHC-TTSCHHHHHHHHHHHHHTTCGGGSHHHHHHHHHHHHHTCHHHHHTTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHh-cccCHHHHHHHHHHHHHcCchhhhHHHHHHHHHHHHhhccccccccCCHHHHHHHHHH
Confidence 467899999999999999975 55 8999999999999999 4 0 2599999999999
Q ss_pred HhhcCcccccccccccccccCcccccchhhHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHhhh-ccCCchHHHHHH
Q 048429 58 LRQQGYRISCDIFGGFKDDRGKFKVSLINDLTGMLSLYEAAHLRIRGEDILDEAVAFTTSHLESMVT-QVSPQLSDEILH 136 (192)
Q Consensus 58 LRqhGy~VS~DvF~~F~d~~G~F~~~l~~dv~glL~LYeAS~l~~~gE~iLdeA~~Ft~~~L~~~~~-~~~~~l~~~V~~ 136 (192)
||||||+||||||++|+|++|+|++++.+||+|||+||||||+++|||+|||+|+.||++||++.+. .++++|+++|++
T Consensus 118 LR~hGy~VS~dvF~~F~d~~G~F~~~l~~dv~glL~LYeAs~l~~~gE~iLdeA~~Fs~~~L~~~~~~~~~~~l~~~V~~ 197 (555)
T 3n0f_A 118 LRQHGFEVSQEAFSGFKDQNGNFLENLKEDTKAILSLYEASFLALEGENILDEARVFAISHLKELSEEKIGKELAEQVNH 197 (555)
T ss_dssp HHHTTCCCCGGGGGGGBCTTSCBCGGGGGCHHHHHHHHHHHTTCCTTCHHHHHHHHHHHHHHHTCCHHHHCHHHHHHHHH
T ss_pred HHhcCCCcChHHHhcccccCccchhhhhhhhHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHHhccCCchHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999765 568899999999
Q ss_pred hcCCCccCCchhHHHhhhhhhcccCCCCChHHHHHHHHhhhHHHHHHhHHHhhhcC
Q 048429 137 ALNRPIRRGLPRLEAIYYIDLYSQDDSKDKAILLKFAKLDFSMLQVIHRKELSIIT 192 (192)
Q Consensus 137 aL~~P~~~~l~Rlear~yI~~y~~~~~~n~~~lLeLAklDFn~~Qs~hq~EL~~ls 192 (192)
||++|||+++||+|||+||+.|++++++|+. ||||||+|||+||++||+||++||
T Consensus 198 aL~~P~~~~l~Rlear~yI~~Y~~~~~~n~~-lLelAKlDFN~~Q~~hq~EL~~ls 252 (555)
T 3n0f_A 198 ALELPLHRRTQRLEAVWSIEAYRKKEDANQV-LLELAILDYNMIQSVYQRDLRETS 252 (555)
T ss_dssp HHHSCTTTSCHHHHHHHHHHHHTTCTTCCHH-HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhcCCcccCchHHHHHHHHHHhcccccccHH-HHHHHHHhHHHHHHHhHHHHHHHH
Confidence 9999999999999999999999999999999 999999999999999999999874
No 4
>3m00_A Aristolochene synthase; plant terpenoid cyclase, lyase binding domain, (2-CIS, 6-trans)-2-fluorofarnesyl diphospha magnesium, metal-binding; HET: 2CF; 2.10A {Nicotiana tabacum} PDB: 3lz9_A* 3m02_A* 3m01_A* 5eau_A* 1hxa_A* 1hx9_A* 1hxc_A* 5eas_A 1hxg_A 4di5_A* 5eat_A*
Probab=100.00 E-value=2.4e-67 Score=492.98 Aligned_cols=189 Identities=46% Similarity=0.820 Sum_probs=179.5
Q ss_pred chhhHHHHHHHHHHHHHHhhCCCcChhhhHHHHHHHHHhC----C--------------C--CCChhhHHHHHHHHhhcC
Q 048429 3 ATIDQDEFEALKQKIKNMLISPTDKSFQKLSLIDAVQRLG----Y--------------D--GNDVHTVALRFRLLRQQG 62 (192)
Q Consensus 3 ~~~~~~~~e~Lk~evr~~l~~~~~d~~~~L~lID~lqRLG----f--------------~--~~dL~~~AL~FRLLRqhG 62 (192)
.+.+.+|+++||++||+||.....+++++|+|||+||||| | | ..||++|||+||||||||
T Consensus 41 ~~~~~~~~e~Lk~eVr~~l~~~~~~~~~~L~lID~lqrLGi~~hF~~EI~~~L~~i~~~~~~~~dl~~~al~FRLLR~hG 120 (550)
T 3m00_A 41 AEKYAKEIEALKEQTRNMLLATGMKLADTLNLIDTIERLGISYHFEKEIDDILDQIYNQNSNCNDLCTSALQFRLLRQHG 120 (550)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHTTCGGGCHHHHHHHHHHHHHHCCCCSSHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHcCchhhhHHHHHHHHHHHHHhcccCCCHHHHHHHHHHHHhcC
Confidence 3568899999999999999743569999999999999999 4 3 369999999999999999
Q ss_pred cccccccccccccccCcccccchhhHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHhhhccCCchHHHHHHhcCCCc
Q 048429 63 YRISCDIFGGFKDDRGKFKVSLINDLTGMLSLYEAAHLRIRGEDILDEAVAFTTSHLESMVTQVSPQLSDEILHALNRPI 142 (192)
Q Consensus 63 y~VS~DvF~~F~d~~G~F~~~l~~dv~glL~LYeAS~l~~~gE~iLdeA~~Ft~~~L~~~~~~~~~~l~~~V~~aL~~P~ 142 (192)
|+||||||++|+|++|+|++++.+|++|||+||||||+++|||+|||+|+.||++||++.+++++++|+++|.|||++||
T Consensus 121 y~VS~dvf~~F~~~~G~F~~~l~~d~~glL~LYeAs~l~~~gE~iLdeA~~fs~~~L~~~~~~~~~~l~~~V~~aL~~P~ 200 (550)
T 3m00_A 121 FNISPEIFSKFQDENGKFKESLASDVLGLLNLYEASHVRTHADDILEDALAFSTIHLESAAPHLKSPLREQVTHALEQCL 200 (550)
T ss_dssp CCCCGGGGGGGBCTTSCBCGGGGGCHHHHHHHHHHHTTCCTTCGGGTTHHHHHHHHHHHHGGGCCTTHHHHHHHHHHSCS
T ss_pred CCCChHHhhhccccCCCccccchhchHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHhCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999988788899999999999999
Q ss_pred cCCchhHHHhhhhh-hcccCCCCChHHHHHHHHhhhHHHHHHhHHHhhhcC
Q 048429 143 RRGLPRLEAIYYID-LYSQDDSKDKAILLKFAKLDFSMLQVIHRKELSIIT 192 (192)
Q Consensus 143 ~~~l~Rlear~yI~-~y~~~~~~n~~~lLeLAklDFn~~Qs~hq~EL~~ls 192 (192)
|+++||+||||||+ .|++++++|+. ||+|||+|||+||++||+||+++|
T Consensus 201 ~~~l~rlear~yI~~~Y~~~~~~n~~-lLelAkldFn~~Q~~hq~EL~~l~ 250 (550)
T 3m00_A 201 HKGVPRVETRFFISSIYDKEQSKNNV-LLRFAKLDFNLLQMLHKQELAQVS 250 (550)
T ss_dssp TTSCHHHHHHHHHHHTGGGCTTCCHH-HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCchHHHHHHHHHHHhcccccccHH-HHHHHHHHHHHHHHhhHHHHHHHH
Confidence 99999999999999 99999999999 999999999999999999999874
No 5
>2j5c_A 1,8-cineole synthase; terpene synthases, 1, monoterpene, lyase; 1.95A {Salvia fruticosa}
Probab=100.00 E-value=1.6e-67 Score=495.87 Aligned_cols=187 Identities=35% Similarity=0.536 Sum_probs=174.6
Q ss_pred hhhHHHHHHHHHHHHHHhhCCCcChhhhHHHHHHHHHhC----------------C-C-----CCChhhHHHHHHHHhhc
Q 048429 4 TIDQDEFEALKQKIKNMLISPTDKSFQKLSLIDAVQRLG----------------Y-D-----GNDVHTVALRFRLLRQQ 61 (192)
Q Consensus 4 ~~~~~~~e~Lk~evr~~l~~~~~d~~~~L~lID~lqRLG----------------f-~-----~~dL~~~AL~FRLLRqh 61 (192)
+.+++++++||++||+|+.+ ..|++++|+|||+||||| | . ..||++|||+|||||||
T Consensus 60 ~~~~~~~~~Lk~~Vr~~~~~-~~d~~~~l~lID~lqrLGi~~hFe~EI~~~L~~i~~~~~~~~~~Dl~~~al~FRlLR~h 138 (569)
T 2j5c_A 60 EKHLMRAAGMIDQVKMMLQE-EVDSIRRLELIDDLRRLGISCHFEREIVEILNSKYYTNNEIDERDLYSTALRFRLLRQY 138 (569)
T ss_dssp --CHHHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHTCGGGGHHHHHHHHHHHTTSSCCSCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHhc-cccHHHHHHHHHHHHhCCchhhhHHHHHHHHHHHHHhccCcccCChhhhhHHhHHHHhc
Confidence 46889999999999999986 458999999999999999 3 1 24999999999999999
Q ss_pred CcccccccccccccccC-cccccchhhHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHhhhcc-CCchHHHHHHhcC
Q 048429 62 GYRISCDIFGGFKDDRG-KFKVSLINDLTGMLSLYEAAHLRIRGEDILDEAVAFTTSHLESMVTQV-SPQLSDEILHALN 139 (192)
Q Consensus 62 Gy~VS~DvF~~F~d~~G-~F~~~l~~dv~glL~LYeAS~l~~~gE~iLdeA~~Ft~~~L~~~~~~~-~~~l~~~V~~aL~ 139 (192)
||+||||||++|+|++| +|++++++||+|||+|||||||++|||+|||+|+.||++||++.++++ +++|+++|++||+
T Consensus 139 Gy~Vs~dvF~~Fkd~~G~~F~~~l~~dv~glL~LY~As~l~~~gE~iLdeA~~Ft~~~L~~~~~~~~~~~l~~~V~~aL~ 218 (569)
T 2j5c_A 139 DFSVSQEVFDCFKNAKGTDFKPSLVDDTRGLLQLYEASFLSAQGEETLRLARDFATKFLQKRVLVDKDINLLSSIERALE 218 (569)
T ss_dssp TCCCCGGGGGGGBCSSSSSBCGGGGGCHHHHHHHHHHHTTCCTTCHHHHHHHHHHHHTTSSCC----CHHHHHHHHHHHH
T ss_pred CCCcCHHHHhcccCCCCCccccchhhccHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHhc
Confidence 99999999999999999 999999999999999999999999999999999999999999988766 8899999999999
Q ss_pred CCccCCchhHHHhhhhhhcccCCCCChHHHHHHHHhhhHHHHHHhHHHhhhcC
Q 048429 140 RPIRRGLPRLEAIYYIDLYSQDDSKDKAILLKFAKLDFSMLQVIHRKELSIIT 192 (192)
Q Consensus 140 ~P~~~~l~Rlear~yI~~y~~~~~~n~~~lLeLAklDFn~~Qs~hq~EL~~ls 192 (192)
+|||+++||+|||+||+.|++++++|+. ||||||+|||+||++||+||++|+
T Consensus 219 ~P~~~~l~rlear~yI~~Y~~~~~~n~~-lLelAkldFn~~Q~~hq~EL~~l~ 270 (569)
T 2j5c_A 219 LPTHWRVQMPNARSFIDAYKRRPDMNPT-VLELAKLDFNMVQAQFQQELKEAS 270 (569)
T ss_dssp SCGGGCCSHHHHHHHHHHHTTCTTCCHH-HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CccccCcHHHHHHHHHHHhccCccccHH-HHHHHHHhHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999 999999999999999999999874
No 6
>1n1b_A (+)-bornyl diphosphate synthase; terpene synthase fold, isomerase; 2.00A {Salvia officinalis} SCOP: a.102.4.1 a.128.1.3 PDB: 1n1z_A* 1n20_A* 1n21_A* 1n22_A* 1n23_A* 1n24_A*
Probab=100.00 E-value=3.9e-67 Score=491.46 Aligned_cols=187 Identities=35% Similarity=0.570 Sum_probs=176.6
Q ss_pred hhhHHHHHHHHHHHHHHhhCCCcChhhhHHHHHHHHHhC----C--------------C-----C----CChhhHHHHHH
Q 048429 4 TIDQDEFEALKQKIKNMLISPTDKSFQKLSLIDAVQRLG----Y--------------D-----G----NDVHTVALRFR 56 (192)
Q Consensus 4 ~~~~~~~e~Lk~evr~~l~~~~~d~~~~L~lID~lqRLG----f--------------~-----~----~dL~~~AL~FR 56 (192)
+.+++++++||++||+|+.+ ..|++++|+|||+||||| | | . .|||+|||+||
T Consensus 31 ~~~~~~~~~Lk~~V~~~~~~-~~d~~~~l~lvD~lqrLGi~~hF~~EI~~~L~~i~~~~~~~~~~~~~~~dl~~~al~FR 109 (549)
T 1n1b_A 31 ERHLDRKAELIVQVRILLKE-KMEPVQQLELIHDLKYLGLSDFFQDEIKEILGVIYNEHKCFHNNEVEKMDLYFTALGFR 109 (549)
T ss_dssp HHHHHHHHHHHHHHHHHHHS-CCCHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHHHCHHHHHCCCCSCCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhc-ccCHHHHHHhHHHHHhCCchhhhHHHHHHHHHHHHhhhccccccccccCChhhchhhhh
Confidence 46889999999999999986 459999999999999999 3 2 1 59999999999
Q ss_pred HHhhcCcccccccccccccccC-cccccchhhHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHhhhc---c-CCchH
Q 048429 57 LLRQQGYRISCDIFGGFKDDRG-KFKVSLINDLTGMLSLYEAAHLRIRGEDILDEAVAFTTSHLESMVTQ---V-SPQLS 131 (192)
Q Consensus 57 LLRqhGy~VS~DvF~~F~d~~G-~F~~~l~~dv~glL~LYeAS~l~~~gE~iLdeA~~Ft~~~L~~~~~~---~-~~~l~ 131 (192)
|||||||+||||||++|+|++| +|++++++||+|||+||||||+++|||+|||+|+.||++||++.+++ + +++|+
T Consensus 110 lLR~hGy~Vs~dvf~~Fk~~~g~~F~~~l~~d~~glL~LY~As~l~~~gE~iL~eA~~Ft~~~L~~~~~~~~~~~~~~l~ 189 (549)
T 1n1b_A 110 LLRQHGFNISQDVFNCFKNEKGIDFKASLAQDTKGMLQLYEASFLLRKGEDTLELAREFATKCLQKKLDEGGNEIDENLL 189 (549)
T ss_dssp HHHHTTCCCCGGGGGGGBCTTSSSBCGGGGGCHHHHHHHHHHHTTCCTTCHHHHHHHHHHHHHHHHHTC------CHHHH
T ss_pred HHHhcCCCcCHHHHhhccCCCCCccchhhhhccHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHhcccccCCCcHH
Confidence 9999999999999999999999 99999999999999999999999999999999999999999999875 5 78899
Q ss_pred HHHHHhcCCCccCCchhHHHhhhhhhcccCCCCChHHHHHHHHhhhHHHHHHhHHHhhhcC
Q 048429 132 DEILHALNRPIRRGLPRLEAIYYIDLYSQDDSKDKAILLKFAKLDFSMLQVIHRKELSIIT 192 (192)
Q Consensus 132 ~~V~~aL~~P~~~~l~Rlear~yI~~y~~~~~~n~~~lLeLAklDFn~~Qs~hq~EL~~ls 192 (192)
++|++||++|||+++||+|||+||+.|++++++|+. ||||||+|||+||++||+||++++
T Consensus 190 ~~V~~aL~~P~~~~l~rlear~yI~~Y~~~~~~n~~-lLelAkldFn~~Q~~hq~El~~l~ 249 (549)
T 1n1b_A 190 LWIRHSLDLPLHWRIQSVEARWFIDAYARRPDMNPL-IFELAKLNFNIIQATHQQELKDLS 249 (549)
T ss_dssp HHHHHHHHSCGGGCCTTTSHHHHHHHHHHCTTCCHH-HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCchhcCchHHHHHHHHHHhcccccccHH-HHHHHHHhHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999 999999999999999999999874
No 7
>3p5p_A Taxadiene synthase; class I and II terpene cyclase fold, diterpene cyclase, DDXX NSE/DTE motif, 3-azacopalyl diphosphate; HET: A3C; 1.82A {Taxus brevifolia} PDB: 3p5r_A*
Probab=100.00 E-value=5.7e-58 Score=442.75 Aligned_cols=167 Identities=34% Similarity=0.579 Sum_probs=156.0
Q ss_pred CcChhhhHHHHHHHHHhC----C--------------C-C-----------CChhhHHHHHHHHhhcCcccccccccccc
Q 048429 25 TDKSFQKLSLIDAVQRLG----Y--------------D-G-----------NDVHTVALRFRLLRQQGYRISCDIFGGFK 74 (192)
Q Consensus 25 ~~d~~~~L~lID~lqRLG----f--------------~-~-----------~dL~~~AL~FRLLRqhGy~VS~DvF~~F~ 74 (192)
|.+++++|++||+||||| | | . .||++|||+|||||||||+||||||++|+
T Consensus 243 P~d~~e~l~lID~LqrLGi~~hF~~EI~~~L~~i~~~~~~~gi~~~~~~~~~Dl~~tAl~FRlLR~~Gy~VS~dvf~~F~ 322 (764)
T 3p5p_A 243 SIDLLERLSLVDNIEHLGIGRHFKQEIKGALDYVYRHWSERGIGWGRDSLVPDLNTTALGLRTLRMHGYNVSSDVLNNFK 322 (764)
T ss_dssp CCHHHHHHHHHHHHHHHTCGGGGHHHHHHHHHHHHHTCCTTCCCSSTTCSSCCHHHHHHHHHHHHHTTCCCCGGGGGGGB
T ss_pred CCcHHHHHHHHHHHHHcCCccccHHHHHHHHHHHHHHhhhcccccccCCCCCCHHHHHHHHHHHHhcCCCccHhHHHhhh
Confidence 679999999999999999 2 2 1 38999999999999999999999999999
Q ss_pred cccCccccc---chhhHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHhhhc---cCCchHHHHHHhcCCCccCCchh
Q 048429 75 DDRGKFKVS---LINDLTGMLSLYEAAHLRIRGEDILDEAVAFTTSHLESMVTQ---VSPQLSDEILHALNRPIRRGLPR 148 (192)
Q Consensus 75 d~~G~F~~~---l~~dv~glL~LYeAS~l~~~gE~iLdeA~~Ft~~~L~~~~~~---~~~~l~~~V~~aL~~P~~~~l~R 148 (192)
|++|+|+++ +.+|++|||+||||||+++|||+|||+|+.||++||++.+++ ++++|+++|++||++|||+++||
T Consensus 323 d~~g~F~~~~~~~~~dv~gmL~LYeAS~l~~~gE~iLdeA~~Fs~~~L~~~~~~~~~~~~~L~~eV~~aL~~P~~~~l~R 402 (764)
T 3p5p_A 323 DENGRFFSSAGQTHVELRSVVNLFRASDLAFPDERAMDDARKFAEPYLREALATKISTNTKLFKEIEYVVEYPWHMSIPR 402 (764)
T ss_dssp CTTSCBCSCTTCSCCCHHHHHHHHHHHTTCCTTCHHHHHHHHHHHHHHHHHHHHTSCSSSHHHHHHHHHHHSCGGGCCHH
T ss_pred cCCCCccccccccccccHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHhccCCCCccHHHHHHHHhcCchhccchH
Confidence 999999974 689999999999999999999999999999999999998762 57889999999999999999999
Q ss_pred HHHhhhhhhcccCCCC------------ChHHHHHHHHhhhHHHHHHhHHHhhhcC
Q 048429 149 LEAIYYIDLYSQDDSK------------DKAILLKFAKLDFSMLQVIHRKELSIIT 192 (192)
Q Consensus 149 lear~yI~~y~~~~~~------------n~~~lLeLAklDFn~~Qs~hq~EL~~ls 192 (192)
+|||+||+.|++++.| |+. ||||||+|||+||++||+||++|+
T Consensus 403 lear~yI~~Y~~~~~~i~Kt~yr~~~~~n~~-lLelAKlDFN~~Q~~hq~EL~~l~ 457 (764)
T 3p5p_A 403 LEARSYIDSYDDNYVWQRKTLYRMPSLSNSK-CLELAKLDFNIVQSLHQEELKLLT 457 (764)
T ss_dssp HHHHHHHHHCCTTCCEESSSEECCTTTSCHH-HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcccchhhhcccccccccccHH-HHHHHHHHHHHHHHHhHHHhhhhc
Confidence 9999999999988763 899 999999999999999999999874
No 8
>3s9v_A Abietadiene synthase, chloroplastic; alpha bundle/barrel, lyase, isomerase; 2.30A {Abies grandis}
Probab=100.00 E-value=1.1e-57 Score=441.69 Aligned_cols=167 Identities=34% Similarity=0.578 Sum_probs=155.7
Q ss_pred CcChhhhHHHHHHHHHhC----C--------------C-C-----------CChhhHHHHHHHHhhcCcccccccccccc
Q 048429 25 TDKSFQKLSLIDAVQRLG----Y--------------D-G-----------NDVHTVALRFRLLRQQGYRISCDIFGGFK 74 (192)
Q Consensus 25 ~~d~~~~L~lID~lqRLG----f--------------~-~-----------~dL~~~AL~FRLLRqhGy~VS~DvF~~F~ 74 (192)
|.+++++|++||+||||| | | . .||++|||+|||||||||+||||||++|+
T Consensus 267 P~d~~e~l~lID~LqrLGi~~hF~~EI~~~L~~i~~~~~~~gi~~~~~~~~~Dl~~tAl~FRlLR~~Gy~VS~dvf~~F~ 346 (785)
T 3s9v_A 267 PLDLFERLWAVDTVERLGIDRHFKEEIKEALDYVYSHWDERGIGWARENPVPDIDDTAMGLRILRLHGYNVSSDVLKTFR 346 (785)
T ss_dssp CCHHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTCCTTCCCSSTTCSSCCHHHHHHHHHHHHHTTCCCCGGGGGGGB
T ss_pred CCcHHHHHHHHHHHHHcCCccccHHHHHHHHHHHHHHhhhccccccccCCCCCHHHHHHHHHHHHhcCCCCCHHHHHHHH
Confidence 678999999999999999 2 2 1 38999999999999999999999999999
Q ss_pred cccCcccccc---hhhHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHhhhc--------cCCchHHHHHHhcCCCcc
Q 048429 75 DDRGKFKVSL---INDLTGMLSLYEAAHLRIRGEDILDEAVAFTTSHLESMVTQ--------VSPQLSDEILHALNRPIR 143 (192)
Q Consensus 75 d~~G~F~~~l---~~dv~glL~LYeAS~l~~~gE~iLdeA~~Ft~~~L~~~~~~--------~~~~l~~~V~~aL~~P~~ 143 (192)
|++|+|++++ .+|++|||+||||||+++|||+|||+|+.||++||++.+.. ++++|+++|+|||++|||
T Consensus 347 d~~g~F~~~~~e~~~dv~g~L~LYeAS~l~~~gE~iLdeA~~Ft~~~L~~~~~~~~~~d~~~~~~~L~~eV~~aL~~P~~ 426 (785)
T 3s9v_A 347 DENGEFFCFLGQTQRGVTDMLNVNRCSHVSFPGETIMEEAKLCTERYLRNALENVDAFDKWAFKKNIRGEVEYALKYPWH 426 (785)
T ss_dssp CTTSCBCSSTTCCCCCHHHHHHHHHHHTSCCTTCHHHHHHHHHHHHHHHHHTTTCCTTCTTCSSSCHHHHHHHHHHSCGG
T ss_pred hcCCCeeeccccccccccccHHHHhHhhcCCCCcHHHHHHHHHHHHHHHHHHhccccccccccCCcHHHHHHHHhCCccc
Confidence 9999999865 69999999999999999999999999999999999998652 568899999999999999
Q ss_pred CCchhHHHhhhhhhcccCCCC------------ChHHHHHHHHhhhHHHHHHhHHHhhhcC
Q 048429 144 RGLPRLEAIYYIDLYSQDDSK------------DKAILLKFAKLDFSMLQVIHRKELSIIT 192 (192)
Q Consensus 144 ~~l~Rlear~yI~~y~~~~~~------------n~~~lLeLAklDFn~~Qs~hq~EL~~ls 192 (192)
+++||+|||+||+.|++++.| |+. ||||||+|||+||++||+||++|+
T Consensus 427 ~~l~RleaR~yI~~Y~~~~~~i~Kt~yr~~~~~n~~-lLelAKlDFN~~Q~~hq~EL~~ls 486 (785)
T 3s9v_A 427 KSMPRLEARSYIENYGPDDVWLGKTVYMMPYISNEK-YLELAKLDFNKVQSIHQTELQDLR 486 (785)
T ss_dssp GCCHHHHHHHHHHHCCTTCCEESSSEECCTTTSCHH-HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCchHHHHHHHHHHhcccchhhhcccccccccccHH-HHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999988764 999 999999999999999999999874
No 9
>3sdr_A Alpha-bisabolene synthase; lyase, terpene synthase; HET: 210; 1.86A {Abies grandis} PDB: 3sdq_A 3sae_A* 3sdt_A* 3sdu_A* 3sdv_A*
Probab=100.00 E-value=1.2e-57 Score=443.05 Aligned_cols=181 Identities=37% Similarity=0.590 Sum_probs=159.3
Q ss_pred HHHHHHHHHHHhhC-----CCcChhhhHHHHHHHHHhC----C--------------C-C-----------CChhhHHHH
Q 048429 10 FEALKQKIKNMLIS-----PTDKSFQKLSLIDAVQRLG----Y--------------D-G-----------NDVHTVALR 54 (192)
Q Consensus 10 ~e~Lk~evr~~l~~-----~~~d~~~~L~lID~lqRLG----f--------------~-~-----------~dL~~~AL~ 54 (192)
.+-|..-|++ +.+ .|.+++++|++||+||||| | | . .||++|||+
T Consensus 276 ~~YL~~~~~~-~~g~VP~~yP~d~~e~l~lID~LqrLGi~~hF~~EI~~~L~~i~~~~~~~gi~~~~~~~~~Dl~~tAl~ 354 (817)
T 3sdr_A 276 LEFLNSVMIK-FGNFVPCLYPVDLLERLLIVDNIVRLGIYRHFEKEIKEALDYVYRHWNERGIGWGRLNPIADLETTALG 354 (817)
T ss_dssp HHHHHHHHHH-HSSCCCSSSCCHHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHHHCCTTCCCSSTTCSSCCHHHHHHH
T ss_pred HHHHHHHHHh-cCCCCCccCCCcHHHHHHHHHHHHHcCCccccHHHHHHHHHHHHHHhhhcccccccCCCCCCHHHHHHH
Confidence 3445555554 332 2679999999999999999 2 2 1 389999999
Q ss_pred HHHHhhcCcccccccccccccccCcccccc---hhhHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHhhhc------
Q 048429 55 FRLLRQQGYRISCDIFGGFKDDRGKFKVSL---INDLTGMLSLYEAAHLRIRGEDILDEAVAFTTSHLESMVTQ------ 125 (192)
Q Consensus 55 FRLLRqhGy~VS~DvF~~F~d~~G~F~~~l---~~dv~glL~LYeAS~l~~~gE~iLdeA~~Ft~~~L~~~~~~------ 125 (192)
|||||||||+||||||++|+|++|+|++++ .+|++|||+||||||+++|||+|||+|+.||++||++.+..
T Consensus 355 FRlLR~~Gy~VS~dvf~~F~d~~g~F~~~~~~~~~dv~gmL~LYeAS~l~~~gE~iLdeA~~Ft~~~L~~~~~~~~~~~~ 434 (817)
T 3sdr_A 355 FRLLRLHRYNVSPAIFDNFKDANGKFICSTGQFNKDVASMLNLYRASQLAFPGENILDEAKSFATKYLREALEKSETSSA 434 (817)
T ss_dssp HHHHHHTTCCCCGGGGGGGBCC--CBCCCSSCHHHHHHHHHHHHHHHTTCCTTCHHHHHHHHHHHHHHHHHHTSGGGGSH
T ss_pred HHHHHHcCCCccHhHHHHHhhcCCCceechhhhchhhHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHhccccccc
Confidence 999999999999999999999999999855 79999999999999999999999999999999999998752
Q ss_pred --cCCchHHHHHHhcCCCccCCchhHHHhhhhhhcccCCCC------------ChHHHHHHHHhhhHHHHHHhHHHhhhc
Q 048429 126 --VSPQLSDEILHALNRPIRRGLPRLEAIYYIDLYSQDDSK------------DKAILLKFAKLDFSMLQVIHRKELSII 191 (192)
Q Consensus 126 --~~~~l~~~V~~aL~~P~~~~l~Rlear~yI~~y~~~~~~------------n~~~lLeLAklDFn~~Qs~hq~EL~~l 191 (192)
++++|+++|+|||++|||+++||+|||+||++|++++.| |+. ||||||+|||+||++||+||++|
T Consensus 435 ~~~~~~L~~eV~~aL~~P~~~~l~Rlear~yI~~Y~~~~~~i~Kt~yr~~~~~n~~-lLelAKlDFN~~Q~~hq~EL~~l 513 (817)
T 3sdr_A 435 WNNKQNLSQEIKYALKTSWHASVPRVEAKRYCQVYRPDYARIAKCVYKLPYVNNEK-FLELGKLDFNIIQSIHQEEMKNV 513 (817)
T ss_dssp HHHHTTHHHHHHHHHHCCSTTCCHHHHHHHHHTTCCTTCCEESSSEECCTTTSCHH-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCcHHHHHHHHhcCchhccChHHHHHHHHHHhCccchhhhhhcccccccccHH-HHHHHHHHHHHHHHHhhhhhhhh
Confidence 247899999999999999999999999999999988763 899 99999999999999999999987
Q ss_pred C
Q 048429 192 T 192 (192)
Q Consensus 192 s 192 (192)
+
T Consensus 514 s 514 (817)
T 3sdr_A 514 T 514 (817)
T ss_dssp H
T ss_pred c
Confidence 4
No 10
>3pya_A ENT-copalyl diphosphate synthase, chloroplastic; class I and II terpene cyclase fold, class II diterpene CYCL DXXDD motif; HET: AG8 1PE; 2.25A {Arabidopsis thaliana} PDB: 3pyb_A*
Probab=100.00 E-value=1.9e-56 Score=429.82 Aligned_cols=186 Identities=33% Similarity=0.538 Sum_probs=167.0
Q ss_pred hhHHHHHHHHHHHHHHhhCC----CcChhhhHHHHHHHHHhC----C--------------C------------CCChhh
Q 048429 5 IDQDEFEALKQKIKNMLISP----TDKSFQKLSLIDAVQRLG----Y--------------D------------GNDVHT 50 (192)
Q Consensus 5 ~~~~~~e~Lk~evr~~l~~~----~~d~~~~L~lID~lqRLG----f--------------~------------~~dL~~ 50 (192)
...+..+.|+..|++...+. |.+++++|++||+||||| | | ..||++
T Consensus 218 ~d~~~l~YL~~~v~k~~g~VP~~yP~d~~e~L~lID~LqRLGIs~hFe~EI~~~L~~i~~~~~~~g~~~~~~~~~~DL~~ 297 (727)
T 3pya_A 218 RDSNCLEYLRNAVKRFNGGVPNVFPVDLFEHIWIVDRLQRLGISRYFEEEIKECLDYVHRYWTDNGICWARCSHVQDIDD 297 (727)
T ss_dssp CCHHHHHHHHHHHHHTTTCCCSSCCCHHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHHTCCTTCCCSSSSCSCCCHHH
T ss_pred CCHHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHHcCCccccHHHHHHHHHHHHHHhhhcCcccccCCCCCCHHH
Confidence 34667789999999876433 579999999999999999 2 2 138999
Q ss_pred HHHHHHHHhhcCcccccccccccccccCccccc---chhhHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHhhhc--
Q 048429 51 VALRFRLLRQQGYRISCDIFGGFKDDRGKFKVS---LINDLTGMLSLYEAAHLRIRGEDILDEAVAFTTSHLESMVTQ-- 125 (192)
Q Consensus 51 ~AL~FRLLRqhGy~VS~DvF~~F~d~~G~F~~~---l~~dv~glL~LYeAS~l~~~gE~iLdeA~~Ft~~~L~~~~~~-- 125 (192)
|||+|||||||||+||||||++|+ ++|+|++. ..+|++|||+||||||+++|||+|||+|+.||++||++.+..
T Consensus 298 tAL~FRLLRqhGy~VS~DvF~~Fk-~~G~F~~~~~e~~~Dv~glLsLYeAS~l~~~gE~iLdeA~~Ft~~~L~~~~~~~~ 376 (727)
T 3pya_A 298 TAMAFRLLRQHGYQVSADVFKNFE-KEGEFFCFVGQSNQAVTGMFNLYRASQLAFPREEILKNAKEFSYNYLLEKREREE 376 (727)
T ss_dssp HHHHHHHHHHTTCCCCGGGGGGGE-ETTEECSSTTCCCCCHHHHHHHHHHHTTCCTTCHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhCCCCCCHHHHHhcc-CCCcccccccccccccHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHhcCC
Confidence 999999999999999999999999 88999843 368999999999999999999999999999999999997642
Q ss_pred ------cCCchHHHHHHhcCCCccCCchhHHHhhhhhhcccCCC-------------CChHHHHHHHHhhhHHHHHHhHH
Q 048429 126 ------VSPQLSDEILHALNRPIRRGLPRLEAIYYIDLYSQDDS-------------KDKAILLKFAKLDFSMLQVIHRK 186 (192)
Q Consensus 126 ------~~~~l~~~V~~aL~~P~~~~l~Rlear~yI~~y~~~~~-------------~n~~~lLeLAklDFn~~Qs~hq~ 186 (192)
++++|+++|+|||++|||+++||+|||+||+.|+++++ +|+. ||||||+|||+||++||+
T Consensus 377 ~~dkw~~~~~L~~~V~~aL~~P~~~~l~RleaR~yI~~Y~~~~~~~i~Kt~yr~~~~~n~~-lLelAKlDFN~~Q~~hq~ 455 (727)
T 3pya_A 377 LIDKWIIMKDLPGEIGFALEIPWYASLPRVETRFYIDQYGGENDVWIGKTLYRMPYVNNNG-YLELAKQDYNNCQAQHQL 455 (727)
T ss_dssp CCCSSEECSCHHHHHHHHHHSCGGGCCHHHHHHHHHHHCCGGGCEEESSSEECCTTTSCHH-HHHHHHHHHHHHHHHHHH
T ss_pred cccccccCCcHHHHHHHHhcCcHhcCChHHHHHHHHHHhccCcchhhhhhhccccccccHH-HHHHHHHhHHHHHHHhHH
Confidence 25789999999999999999999999999999997654 5999 999999999999999999
Q ss_pred HhhhcC
Q 048429 187 ELSIIT 192 (192)
Q Consensus 187 EL~~ls 192 (192)
||++||
T Consensus 456 EL~~ls 461 (727)
T 3pya_A 456 EWDIFQ 461 (727)
T ss_dssp HHHHHH
T ss_pred HHhhhh
Confidence 999874
No 11
>1pd3_A Nonstructural protein NS2; influenza virus A, NEP/NS2, unknown function; 2.60A {Influenza a virus} SCOP: a.30.3.1
Probab=47.52 E-value=25 Score=23.04 Aligned_cols=32 Identities=28% Similarity=0.505 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHHhhCCCcChhhhHHHHHHHHHh
Q 048429 9 EFEALKQKIKNMLISPTDKSFQKLSLIDAVQRL 41 (192)
Q Consensus 9 ~~e~Lk~evr~~l~~~~~d~~~~L~lID~lqRL 41 (192)
.+.-|.+|||..|.. +.+.++++.++.+||-|
T Consensus 17 eIRwlIeE~Rh~Lk~-TensfeQItfmqalQLl 48 (58)
T 1pd3_A 17 EIRWLIEEVRHRLKI-TENSFEQITFMQALQLL 48 (58)
T ss_dssp HHHHHHHHHHHTCCC-CTTSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh-hhchHHHHHHHHHHHHH
Confidence 556688999999975 67889999999888854
No 12
>2kng_A Protein LSR2; DNA-binding domain, immune response, DNA binding protein; NMR {Mycobacterium tuberculosis}
Probab=34.55 E-value=24 Score=23.20 Aligned_cols=28 Identities=29% Similarity=0.529 Sum_probs=20.6
Q ss_pred HhhcCcccccccccccccccCcccccchhhHHHHHHHHHHhhcC
Q 048429 58 LRQQGYRISCDIFGGFKDDRGKFKVSLINDLTGMLSLYEAAHLR 101 (192)
Q Consensus 58 LRqhGy~VS~DvF~~F~d~~G~F~~~l~~dv~glL~LYeAS~l~ 101 (192)
-|.+||.||.- |.. ...+++-|+|+++-
T Consensus 22 Ar~nG~~VsdR---------GRI-------p~~V~eAY~aA~~~ 49 (55)
T 2kng_A 22 ARRNGHNVSTR---------GRI-------PADVIDAYHAATLE 49 (55)
T ss_dssp HHHTTCCCCSS---------SCC-------CHHHHHHHHHHHHH
T ss_pred HHHcCCcCCCC---------CCC-------CHHHHHHHHHcCCc
Confidence 47899999864 665 35677789988864
No 13
>1tzy_D Histone H4-VI; histone-fold, tetramer-dimer-dimer, DNA binding protein; 1.90A {Gallus gallus} SCOP: a.22.1.1 PDB: 1f66_B 1eqz_D 1hq3_D 1u35_B 2aro_D 2cv5_B* 2f8n_B 3nqu_B 3r45_B 3azg_B 3a6n_B 3an2_B 3av1_B 3av2_B 3ayw_B 3aze_B 3azf_B 3afa_B 3azh_B 3azk_B ...
Probab=22.40 E-value=63 Score=23.09 Aligned_cols=40 Identities=33% Similarity=0.428 Sum_probs=24.3
Q ss_pred HHHHhhcCc-ccccccccccccccCcccccchhhHHHHHHHHHHhhcCCCCchHHHHHHHHHHH
Q 048429 55 FRLLRQQGY-RISCDIFGGFKDDRGKFKVSLINDLTGMLSLYEAAHLRIRGEDILDEAVAFTTS 117 (192)
Q Consensus 55 FRLLRqhGy-~VS~DvF~~F~d~~G~F~~~l~~dv~glL~LYeAS~l~~~gE~iLdeA~~Ft~~ 117 (192)
=||+|..|+ .||.|+..... ..+.-. -|+|+++|..||..
T Consensus 36 ~Rlar~~G~~rIs~~a~~~l~-----------~vle~~------------~~~V~~dA~~~a~h 76 (103)
T 1tzy_D 36 RRLARRGGVKRISGLIYEETR-----------GVLKVF------------LENVIRDAVTYTEH 76 (103)
T ss_dssp HHHHHHTTCCEECTTHHHHHH-----------HHHHHH------------HHHHHHHHHHHHHH
T ss_pred HHHHHHcCccccCHHHHHHHH-----------HHHHHH------------HHHHHHHHHHHHHH
Confidence 367788887 37766654332 222222 26688888888773
No 14
>2yfw_B Histone H4, H4; cell cycle, kinetochore, centromere, histone chaperone, BUDD; 2.60A {Kluyveromyces lactis nrrl y-1140}
Probab=22.11 E-value=65 Score=23.08 Aligned_cols=40 Identities=38% Similarity=0.549 Sum_probs=24.2
Q ss_pred HHHHhhcCc-ccccccccccccccCcccccchhhHHHHHHHHHHhhcCCCCchHHHHHHHHHHH
Q 048429 55 FRLLRQQGY-RISCDIFGGFKDDRGKFKVSLINDLTGMLSLYEAAHLRIRGEDILDEAVAFTTS 117 (192)
Q Consensus 55 FRLLRqhGy-~VS~DvF~~F~d~~G~F~~~l~~dv~glL~LYeAS~l~~~gE~iLdeA~~Ft~~ 117 (192)
=||+|..|+ .||.|+..... ..+.-.+ |+|+++|..||..
T Consensus 36 ~Rlar~~G~~rIs~~a~~~l~-----------~vle~~~------------~~V~~dA~~~a~h 76 (103)
T 2yfw_B 36 RRLARRGGVKRISGLIYEEVR-----------NVLKTFL------------ESVIRDAVTYTEH 76 (103)
T ss_dssp HHHHHHTTCCEECTTHHHHHH-----------HHHHHHH------------HHHHHHHHHHHHH
T ss_pred HHHHHHcCccccCHHHHHHHH-----------HHHHHHH------------HHHHHHHHHHHHH
Confidence 367788787 37776654332 2222222 5688888888763
No 15
>2j6y_A Phosphoserine phosphatase RSBU; hydrolase, partner switching, protein phosphatase, RSBT, stress; 1.85A {Bacillus subtilis} PDB: 2j70_A 2j6z_A
Probab=20.17 E-value=93 Score=23.07 Aligned_cols=35 Identities=23% Similarity=0.255 Sum_probs=27.3
Q ss_pred hhhHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHhh
Q 048429 85 INDLTGMLSLYEAAHLRIRGEDILDEAVAFTTSHLESMV 123 (192)
Q Consensus 85 ~~dv~glL~LYeAS~l~~~gE~iLdeA~~Ft~~~L~~~~ 123 (192)
.+-=+.||.-|=.+ .+|..|-+|-.||+..++..+
T Consensus 8 ~~~Y~~iL~~yl~~----~~E~~Ly~aq~fsr~liek~I 42 (111)
T 2j6y_A 8 EQRYHQLLSRYIAE----LTKTSLYQAQKFSRKTIEHQI 42 (111)
T ss_dssp HHHHHHHHHHHHHH----CCHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHc----ccHHHHHHHHHHHHHHHHcCC
Confidence 34566788777666 469999999999999988644
Done!