Query 048430
Match_columns 973
No_of_seqs 853 out of 6564
Neff 9.5
Searched_HMMs 29240
Date Mon Mar 25 16:25:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048430.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/048430hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgz_A Protein brassinosteroid 100.0 1.8E-81 6E-86 775.4 40.1 588 1-612 16-750 (768)
2 3rgz_A Protein brassinosteroid 100.0 1.6E-63 5.3E-68 615.2 35.9 515 45-578 126-743 (768)
3 1ziw_A TOLL-like receptor 3; i 100.0 3E-59 1E-63 572.2 43.4 564 33-604 4-627 (680)
4 3t6q_A CD180 antigen; protein- 100.0 2E-57 6.8E-62 548.4 39.1 508 53-580 20-564 (606)
5 4eco_A Uncharacterized protein 100.0 4.2E-59 1.4E-63 562.4 18.4 498 1-577 34-601 (636)
6 1ziw_A TOLL-like receptor 3; i 100.0 6.4E-56 2.2E-60 542.6 42.9 523 45-581 49-627 (680)
7 3vq2_A TLR4, TOLL-like recepto 100.0 3E-56 1E-60 538.1 36.0 529 49-604 15-563 (606)
8 3t6q_A CD180 antigen; protein- 100.0 2.1E-55 7.1E-60 530.8 39.0 505 35-556 14-564 (606)
9 3j0a_A TOLL-like receptor 5; m 100.0 7.5E-55 2.6E-59 543.3 42.5 523 51-602 10-563 (844)
10 4ecn_A Leucine-rich repeat pro 100.0 4.3E-56 1.5E-60 543.2 28.7 481 1-576 273-864 (876)
11 3j0a_A TOLL-like receptor 5; m 100.0 9.7E-55 3.3E-59 542.3 34.0 519 33-581 14-565 (844)
12 3vq2_A TLR4, TOLL-like recepto 100.0 3.3E-53 1.1E-57 511.5 35.8 505 71-597 13-532 (606)
13 2z63_A TOLL-like receptor 4, v 100.0 5.3E-51 1.8E-55 488.8 36.7 508 50-582 12-537 (570)
14 2z81_A CD282 antigen, TOLL-lik 100.0 4E-51 1.4E-55 487.3 28.8 499 32-581 3-515 (549)
15 4asz_A BDNF/NT-3 growth factor 100.0 3E-52 1E-56 449.1 13.2 263 680-969 13-295 (299)
16 4aoj_A High affinity nerve gro 100.0 1.1E-51 3.7E-56 451.1 16.7 261 681-968 42-324 (329)
17 3omv_A RAF proto-oncogene seri 100.0 2.9E-51 9.9E-56 440.9 18.4 262 679-965 35-302 (307)
18 4gt4_A Tyrosine-protein kinase 100.0 3.4E-51 1.2E-55 442.8 13.7 253 682-961 28-304 (308)
19 2z63_A TOLL-like receptor 4, v 100.0 1.6E-48 5.6E-53 467.2 35.9 490 44-557 27-536 (570)
20 2z81_A CD282 antigen, TOLL-lik 100.0 3.3E-48 1.1E-52 462.2 33.1 489 73-603 9-514 (549)
21 4fih_A Serine/threonine-protei 100.0 3E-49 1E-53 430.3 18.6 250 680-957 74-324 (346)
22 4g8a_A TOLL-like receptor 4; l 100.0 2.6E-47 8.8E-52 463.2 36.1 531 51-603 37-584 (635)
23 4ase_A Vascular endothelial gr 100.0 2.7E-49 9.1E-54 435.5 15.8 269 671-965 55-349 (353)
24 4b9d_A Serine/threonine-protei 100.0 4.4E-49 1.5E-53 429.6 17.1 251 679-957 23-277 (350)
25 4g3f_A NF-kappa-beta-inducing 100.0 4.3E-49 1.5E-53 427.9 16.8 256 680-966 58-319 (336)
26 2z7x_B TOLL-like receptor 1, v 100.0 3.2E-48 1.1E-52 458.8 23.9 461 72-580 3-485 (520)
27 3hmm_A TGF-beta receptor type- 100.0 4.4E-48 1.5E-52 420.0 21.4 268 680-964 3-298 (303)
28 4ecn_A Leucine-rich repeat pro 100.0 7.3E-48 2.5E-52 470.7 25.7 450 69-580 323-844 (876)
29 3fpq_A Serine/threonine-protei 100.0 3.3E-48 1.1E-52 414.1 19.5 245 683-957 29-283 (290)
30 4fie_A Serine/threonine-protei 100.0 4.1E-48 1.4E-52 431.7 19.4 250 680-957 151-401 (423)
31 4eco_A Uncharacterized protein 100.0 1.8E-48 6.3E-53 469.6 16.4 459 69-601 81-602 (636)
32 4aw0_A HPDK1, 3-phosphoinositi 100.0 3.2E-48 1.1E-52 415.7 15.0 249 680-957 32-285 (311)
33 2z7x_B TOLL-like receptor 1, v 100.0 5.9E-47 2E-51 447.9 26.8 459 48-556 3-485 (520)
34 3hyh_A Carbon catabolite-derep 100.0 1.7E-47 5.9E-52 404.8 19.8 246 680-957 13-263 (275)
35 3ubd_A Ribosomal protein S6 ki 100.0 1.8E-47 6.1E-52 410.3 11.5 248 680-957 24-282 (304)
36 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 1.2E-45 4.2E-50 440.3 28.1 463 48-581 34-515 (562)
37 4g31_A Eukaryotic translation 100.0 3.8E-46 1.3E-50 402.4 15.1 249 680-957 5-280 (299)
38 4g8a_A TOLL-like receptor 4; l 100.0 1.7E-43 5.7E-48 429.7 35.0 526 32-580 26-584 (635)
39 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 9.8E-43 3.3E-47 415.3 30.6 437 45-556 52-514 (562)
40 4b99_A Mitogen-activated prote 100.0 6.4E-44 2.2E-48 399.8 17.2 272 680-957 54-345 (398)
41 4f9c_A Cell division cycle 7-r 100.0 7.2E-44 2.5E-48 395.4 16.9 272 676-957 17-353 (361)
42 3v47_A TOLL-like receptor 5B a 100.0 1.5E-42 5.1E-47 403.1 27.9 392 96-582 13-414 (455)
43 3v47_A TOLL-like receptor 5B a 100.0 6.1E-42 2.1E-46 398.0 29.4 392 30-533 5-413 (455)
44 1jl5_A Outer protein YOPM; leu 100.0 1.2E-42 4E-47 400.4 22.5 388 68-580 10-415 (454)
45 1jl5_A Outer protein YOPM; leu 100.0 9.2E-42 3.2E-46 393.0 26.5 407 45-581 11-434 (454)
46 3uto_A Twitchin; kinase, muscl 100.0 2.1E-42 7.3E-47 407.2 20.8 253 679-957 156-411 (573)
47 3v5w_A G-protein coupled recep 100.0 2.7E-42 9.1E-47 401.3 19.9 250 679-957 188-450 (689)
48 3uim_A Brassinosteroid insensi 100.0 8E-42 2.7E-46 378.3 18.8 287 664-960 14-308 (326)
49 2qkw_B Protein kinase; three-h 100.0 1.4E-41 4.9E-46 375.3 20.4 280 671-963 30-315 (321)
50 1ogq_A PGIP-2, polygalacturona 100.0 1E-41 3.5E-46 373.9 18.1 285 1-302 10-302 (313)
51 3s95_A LIMK-1, LIM domain kina 100.0 4E-41 1.4E-45 369.8 21.6 264 680-968 10-287 (310)
52 3fxz_A Serine/threonine-protei 100.0 2E-40 7E-45 361.2 21.2 251 679-957 19-270 (297)
53 3soc_A Activin receptor type-2 100.0 5.9E-41 2E-45 370.1 16.8 276 679-964 23-319 (322)
54 2psq_A Fibroblast growth facto 100.0 1.4E-40 4.6E-45 373.9 19.7 262 679-967 80-368 (370)
55 3bz5_A Internalin-J, INLJ; leu 100.0 3.3E-39 1.1E-43 372.0 30.2 362 58-581 31-392 (457)
56 4hcu_A Tyrosine-protein kinase 100.0 8.8E-41 3E-45 359.0 14.9 256 680-963 10-266 (269)
57 2nru_A Interleukin-1 receptor- 100.0 3.5E-39 1.2E-43 353.9 27.4 281 666-963 11-306 (307)
58 3p86_A Serine/threonine-protei 100.0 1.7E-40 5.9E-45 363.7 16.8 265 674-966 31-301 (309)
59 2c30_A Serine/threonine-protei 100.0 9.8E-40 3.4E-44 359.9 22.4 262 668-957 23-295 (321)
60 3kul_A Ephrin type-A receptor 100.0 1.8E-40 6.2E-45 366.4 16.4 258 680-964 49-314 (325)
61 3sxs_A Cytoplasmic tyrosine-pr 100.0 8.7E-41 3E-45 358.9 13.3 258 679-964 7-265 (268)
62 3cbl_A C-FES, proto-oncogene t 100.0 5.3E-41 1.8E-45 378.7 11.7 259 679-964 113-375 (377)
63 3ugc_A Tyrosine-protein kinase 100.0 9.9E-41 3.4E-45 363.9 13.4 275 679-966 9-294 (295)
64 3fe3_A MAP/microtubule affinit 100.0 2.5E-40 8.7E-45 364.7 16.7 249 678-957 13-265 (328)
65 3zgw_A Maternal embryonic leuc 100.0 4.6E-40 1.6E-44 364.6 17.8 252 678-958 8-262 (347)
66 1o6v_A Internalin A; bacterial 100.0 3.9E-38 1.3E-42 366.2 33.9 346 67-529 44-389 (466)
67 3niz_A Rhodanese family protei 100.0 1.8E-39 6.1E-44 356.3 20.9 274 678-957 19-301 (311)
68 3gen_A Tyrosine-protein kinase 100.0 3.3E-40 1.1E-44 357.5 14.9 259 678-964 22-281 (283)
69 2qol_A Ephrin receptor; recept 100.0 3.1E-40 1.1E-44 371.2 15.1 259 680-965 45-311 (373)
70 3lb7_A RAF proto-oncogene seri 100.0 9.4E-40 3.2E-44 357.6 17.8 263 679-966 35-303 (307)
71 3q4u_A Activin receptor type-1 100.0 2.4E-39 8.2E-44 354.1 21.1 264 679-961 7-300 (301)
72 4eqm_A Protein kinase; transfe 100.0 8.1E-40 2.8E-44 356.1 16.7 260 679-962 10-274 (294)
73 1mp8_A Focal adhesion kinase 1 100.0 8E-40 2.7E-44 354.0 15.8 262 678-967 13-280 (281)
74 4aw2_A Serine/threonine-protei 100.0 5.3E-40 1.8E-44 374.5 15.2 263 672-957 66-339 (437)
75 3vhe_A Vascular endothelial gr 100.0 8.5E-40 2.9E-44 367.3 16.6 270 670-965 12-357 (359)
76 1tki_A Titin; serine kinase, m 100.0 2.8E-39 9.5E-44 355.9 20.2 253 679-958 4-259 (321)
77 2yab_A Death-associated protei 100.0 4.4E-39 1.5E-43 359.0 20.7 252 679-957 11-273 (361)
78 1o6l_A RAC-beta serine/threoni 100.0 5.8E-39 2E-43 354.8 21.1 249 679-957 4-261 (337)
79 4euu_A Serine/threonine-protei 100.0 6.7E-39 2.3E-43 353.5 21.3 276 680-961 9-307 (319)
80 3mdy_A Bone morphogenetic prot 100.0 2.1E-38 7.2E-43 352.7 25.1 272 672-965 29-333 (337)
81 3t9t_A Tyrosine-protein kinase 100.0 4.4E-39 1.5E-43 345.4 17.7 256 680-963 8-264 (267)
82 1csn_A Casein kinase-1; phosph 100.0 1.3E-38 4.5E-43 347.7 21.8 265 679-966 9-286 (298)
83 1k9a_A Carboxyl-terminal SRC k 100.0 3.9E-39 1.3E-43 371.8 18.5 251 679-963 192-445 (450)
84 3tki_A Serine/threonine-protei 100.0 2.7E-39 9.4E-44 356.5 16.4 253 679-957 6-262 (323)
85 2izr_A Casein kinase I isoform 100.0 8.3E-39 2.9E-43 354.5 20.3 263 679-965 8-283 (330)
86 3poz_A Epidermal growth factor 100.0 1.6E-39 5.5E-44 359.5 14.4 260 680-967 15-282 (327)
87 1kob_A Twitchin; kinase, intra 100.0 8.1E-39 2.8E-43 360.1 20.3 253 679-957 50-305 (387)
88 3tt0_A Basic fibroblast growth 100.0 4.4E-39 1.5E-43 363.8 18.2 260 679-965 68-354 (382)
89 1qcf_A Haematopoetic cell kina 100.0 5.9E-40 2E-44 379.4 11.2 257 678-963 186-444 (454)
90 3h4j_B AMPK kdaid, SNF1-like p 100.0 1.9E-39 6.4E-44 358.2 14.3 248 679-958 8-260 (336)
91 2y0a_A Death-associated protei 100.0 1.1E-38 3.8E-43 352.3 20.5 251 680-957 11-272 (326)
92 1o6v_A Internalin A; bacterial 100.0 1.4E-37 4.9E-42 361.5 30.8 346 91-553 44-389 (466)
93 3l9p_A Anaplastic lymphoma kin 100.0 1.5E-39 5.1E-44 365.2 13.5 260 680-966 71-348 (367)
94 3op5_A Serine/threonine-protei 100.0 4.5E-39 1.5E-43 361.6 17.3 270 678-965 33-331 (364)
95 3soa_A Calcium/calmodulin-depe 100.0 1.4E-38 4.7E-43 364.4 21.5 254 678-957 9-268 (444)
96 1luf_A Muscle-specific tyrosin 100.0 1.6E-39 5.3E-44 362.8 13.3 265 677-968 44-340 (343)
97 3o0g_A Cell division protein k 100.0 8.8E-39 3E-43 347.9 18.7 273 680-957 2-283 (292)
98 1opk_A P150, C-ABL, proto-onco 100.0 2E-39 6.9E-44 378.4 14.3 256 679-962 219-477 (495)
99 1ob3_A PFPK5, cell division co 100.0 5.5E-39 1.9E-43 348.6 16.8 269 680-957 2-281 (288)
100 2x4f_A Myosin light chain kina 100.0 8.6E-39 2.9E-43 359.2 18.9 247 685-957 94-343 (373)
101 1rjb_A FL cytokine receptor; k 100.0 8.2E-39 2.8E-43 357.0 18.4 267 677-969 42-340 (344)
102 2bdw_A Hypothetical protein K1 100.0 1.1E-38 3.8E-43 357.0 19.3 253 678-957 27-285 (362)
103 4f0f_A Serine/threonine-protei 100.0 1.1E-38 3.9E-43 346.1 18.7 253 679-961 18-287 (287)
104 1t46_A HOMO sapiens V-KIT hard 100.0 1.2E-38 4.1E-43 350.7 18.8 263 678-966 21-310 (313)
105 3cc6_A Protein tyrosine kinase 100.0 6.7E-39 2.3E-43 346.8 16.5 261 678-966 10-276 (281)
106 2id5_A Lingo-1, leucine rich r 100.0 5E-38 1.7E-42 367.1 25.1 213 367-579 124-336 (477)
107 4dc2_A Protein kinase C IOTA t 100.0 4.4E-39 1.5E-43 362.0 15.3 255 679-957 51-319 (396)
108 3txo_A PKC-L, NPKC-ETA, protei 100.0 1.5E-39 5.3E-44 361.8 11.3 250 678-957 21-281 (353)
109 3og7_A AKAP9-BRAF fusion prote 100.0 6.1E-39 2.1E-43 348.5 15.8 261 678-963 22-288 (289)
110 3bz5_A Internalin-J, INLJ; leu 100.0 2.1E-37 7.1E-42 357.0 29.4 356 44-561 41-396 (457)
111 3c0i_A Peripheral plasma membr 100.0 1.1E-38 3.8E-43 356.0 18.1 253 679-957 23-287 (351)
112 2ivs_A Proto-oncogene tyrosine 100.0 8.3E-39 2.8E-43 352.1 16.5 260 678-964 21-312 (314)
113 2vd5_A DMPK protein; serine/th 100.0 3.1E-39 1E-43 365.7 13.2 261 673-957 54-328 (412)
114 3kfa_A Tyrosine-protein kinase 100.0 3.8E-39 1.3E-43 350.1 13.3 262 677-966 10-274 (288)
115 4fr4_A YANK1, serine/threonine 100.0 3E-38 1E-42 354.0 20.9 249 680-956 15-271 (384)
116 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 2.2E-39 7.6E-44 374.1 11.8 257 678-963 182-440 (452)
117 2w4o_A Calcium/calmodulin-depe 100.0 1.1E-38 3.8E-43 355.5 17.1 252 678-957 51-306 (349)
118 3v8s_A RHO-associated protein 100.0 1.7E-39 5.8E-44 367.6 10.5 259 673-957 62-330 (410)
119 3dtc_A Mitogen-activated prote 100.0 5.5E-39 1.9E-43 345.5 13.6 250 680-961 7-271 (271)
120 4e5w_A Tyrosine-protein kinase 100.0 7.1E-39 2.4E-43 350.5 14.6 267 680-962 21-301 (302)
121 1fot_A TPK1 delta, CAMP-depend 100.0 1E-38 3.5E-43 350.2 15.8 246 679-957 5-259 (318)
122 1u59_A Tyrosine-protein kinase 100.0 2E-38 6.8E-43 344.2 17.7 260 681-968 10-277 (287)
123 3gni_B Strad alpha; kinase fol 100.0 4.9E-38 1.7E-42 356.7 21.7 275 679-957 24-334 (389)
124 2pmi_A Negative RE, cyclin-dep 100.0 2.5E-38 8.6E-43 348.3 18.7 273 679-957 4-294 (317)
125 2zv2_A Calcium/calmodulin-depe 100.0 2.3E-38 7.9E-43 345.6 18.3 250 679-957 12-293 (298)
126 2pvf_A Fibroblast growth facto 100.0 1.3E-38 4.5E-43 353.5 16.5 265 678-969 33-324 (334)
127 1xjd_A Protein kinase C, theta 100.0 1.4E-38 4.7E-43 352.7 16.5 252 676-957 13-270 (345)
128 2xir_A Vascular endothelial gr 100.0 2.2E-38 7.4E-43 349.1 18.1 271 670-966 17-313 (316)
129 1b6c_B TGF-B superfamily recep 100.0 1.1E-37 3.8E-42 347.6 23.9 275 671-964 33-337 (342)
130 2eva_A TAK1 kinase - TAB1 chim 100.0 3.9E-38 1.3E-42 345.0 19.8 256 680-966 8-266 (307)
131 3a8x_A Protein kinase C IOTA t 100.0 1.5E-38 5.2E-43 353.1 16.7 253 680-957 9-276 (345)
132 3p1a_A MYT1 kinase, membrane-a 100.0 4.9E-38 1.7E-42 345.0 20.5 245 680-957 57-305 (311)
133 2w1i_A JAK2; chromosomal rearr 100.0 1E-38 3.6E-43 353.0 15.3 271 680-966 41-325 (326)
134 3g2f_A Bone morphogenetic prot 100.0 6.9E-39 2.3E-43 356.4 13.8 277 679-967 12-322 (336)
135 4fvq_A Tyrosine-protein kinase 100.0 6E-39 2E-43 348.8 12.6 251 680-963 8-275 (289)
136 1mqb_A Ephrin type-A receptor 100.0 2E-38 6.7E-43 351.6 17.0 263 680-969 44-315 (333)
137 3uc3_A Serine/threonine-protei 100.0 3.2E-38 1.1E-42 353.3 18.7 253 679-957 19-275 (361)
138 2i1m_A Macrophage colony-stimu 100.0 2E-38 6.9E-43 352.1 16.9 269 675-969 41-332 (333)
139 3qup_A Tyrosine-protein kinase 100.0 1.1E-38 3.9E-43 352.5 14.8 261 677-964 20-299 (323)
140 3lxp_A Non-receptor tyrosine-p 100.0 1.2E-38 4.1E-43 351.1 14.9 267 682-968 33-315 (318)
141 3lxl_A Tyrosine-protein kinase 100.0 4.5E-39 1.5E-43 356.2 11.5 268 680-966 23-306 (327)
142 3kmu_A ILK, integrin-linked ki 100.0 1.9E-38 6.4E-43 341.3 15.9 251 680-963 10-270 (271)
143 1qpc_A LCK kinase; alpha beta 100.0 1.1E-38 3.7E-43 344.8 14.0 260 678-966 11-272 (279)
144 3llt_A Serine/threonine kinase 100.0 4.3E-38 1.5E-42 353.5 19.2 284 663-957 18-356 (360)
145 3dbq_A Dual specificity protei 100.0 2E-38 6.8E-43 353.2 16.2 252 679-958 8-275 (343)
146 4hgt_A Casein kinase I isoform 100.0 1.1E-37 3.6E-42 340.2 21.5 264 678-966 7-283 (296)
147 3uzp_A CKI-delta, CKID, casein 100.0 1.2E-37 4.2E-42 339.7 21.8 263 679-966 8-283 (296)
148 1rdq_E PKA C-alpha, CAMP-depen 100.0 1.5E-38 5.1E-43 353.7 14.6 245 680-957 41-294 (350)
149 3c1x_A Hepatocyte growth facto 100.0 5.9E-39 2E-43 360.3 11.4 260 682-968 91-360 (373)
150 3g33_A Cell division protein k 100.0 3.7E-38 1.3E-42 345.8 17.2 270 678-957 7-297 (308)
151 3cok_A Serine/threonine-protei 100.0 2.5E-38 8.5E-43 341.8 15.6 250 679-957 10-263 (278)
152 3kn6_A Ribosomal protein S6 ki 100.0 6.9E-38 2.4E-42 345.6 19.5 249 685-957 16-271 (325)
153 3qd2_B Eukaryotic translation 100.0 6.2E-38 2.1E-42 348.1 19.0 250 679-957 5-326 (332)
154 2wqm_A Serine/threonine-protei 100.0 9E-38 3.1E-42 343.1 19.9 263 680-967 32-301 (310)
155 3a62_A Ribosomal protein S6 ki 100.0 6.7E-38 2.3E-42 346.2 18.7 249 679-957 16-277 (327)
156 3f3z_A Calcium/calmodulin-depe 100.0 7.6E-38 2.6E-42 337.7 18.7 251 679-957 8-262 (277)
157 2h34_A Serine/threonine-protei 100.0 6E-38 2E-42 344.0 17.9 263 678-966 32-299 (309)
158 2i0e_A Protein kinase C-beta I 100.0 5.9E-38 2E-42 348.8 18.0 250 678-957 18-277 (353)
159 3kk8_A Calcium/calmodulin depe 100.0 1.3E-37 4.4E-42 337.3 20.3 252 679-957 5-262 (284)
160 3kex_A Receptor tyrosine-prote 100.0 2.2E-38 7.6E-43 350.1 14.5 260 680-967 13-280 (325)
161 4eut_A Serine/threonine-protei 100.0 3.8E-38 1.3E-42 357.8 16.8 278 680-963 9-309 (396)
162 3dls_A PAS domain-containing s 100.0 1.5E-38 5E-43 352.4 12.9 243 678-957 22-275 (335)
163 2zmd_A Dual specificity protei 100.0 6E-38 2.1E-42 354.8 18.0 251 680-958 56-322 (390)
164 2buj_A Serine/threonine-protei 100.0 6.1E-38 2.1E-42 345.7 17.6 261 679-964 28-307 (317)
165 2y94_A 5'-AMP-activated protei 100.0 1.3E-37 4.3E-42 358.5 20.9 247 680-957 16-267 (476)
166 1u5q_A Serine/threonine protei 100.0 5.5E-38 1.9E-42 349.3 17.2 247 680-958 54-307 (348)
167 2a2a_A Death-associated protei 100.0 1.3E-37 4.4E-42 343.5 20.0 252 679-957 11-273 (321)
168 3ork_A Serine/threonine protei 100.0 7.3E-39 2.5E-43 351.8 10.0 254 679-957 11-274 (311)
169 3brb_A Proto-oncogene tyrosine 100.0 4.6E-38 1.6E-42 345.9 16.4 264 677-967 31-312 (313)
170 3lzb_A Epidermal growth factor 100.0 1.9E-38 6.5E-43 350.6 13.3 262 679-968 14-283 (327)
171 2ozo_A Tyrosine-protein kinase 100.0 3.2E-38 1.1E-42 376.9 16.2 252 687-966 343-601 (613)
172 3pls_A Macrophage-stimulating 100.0 1.5E-37 5E-42 339.4 20.0 259 682-966 23-290 (298)
173 3f66_A Hepatocyte growth facto 100.0 7E-38 2.4E-42 341.9 17.2 260 680-966 25-294 (298)
174 3oz6_A Mitogen-activated prote 100.0 1.1E-37 3.7E-42 353.6 19.2 274 677-957 6-329 (388)
175 3fdn_A Serine/threonine-protei 100.0 4E-38 1.4E-42 340.3 14.9 249 678-958 7-259 (279)
176 2eue_A Carbon catabolite derep 100.0 1.1E-37 3.7E-42 336.1 18.2 246 680-957 13-263 (275)
177 3mtl_A Cell division protein k 100.0 2.5E-38 8.6E-43 349.4 13.6 272 680-957 2-282 (324)
178 2ac3_A MAP kinase-interacting 100.0 1E-37 3.6E-42 343.6 18.5 264 680-957 12-296 (316)
179 3hko_A Calcium/calmodulin-depe 100.0 8.7E-38 3E-42 348.9 17.5 259 675-957 21-331 (345)
180 3gxj_A TGF-beta receptor type- 100.0 1.9E-39 6.4E-44 355.3 3.8 266 680-964 3-298 (303)
181 2h8h_A Proto-oncogene tyrosine 100.0 8.1E-39 2.8E-43 376.7 9.5 256 678-962 265-522 (535)
182 4agu_A Cyclin-dependent kinase 100.0 1.4E-37 4.7E-42 341.9 18.6 272 680-957 3-285 (311)
183 1xbb_A Tyrosine-protein kinase 100.0 3.1E-38 1.1E-42 343.4 13.1 261 679-968 15-284 (291)
184 1nxk_A MAP kinase-activated pr 100.0 2.3E-37 7.8E-42 351.0 20.8 250 680-958 61-323 (400)
185 2yex_A Serine/threonine-protei 100.0 1.5E-37 5.3E-42 335.2 18.2 253 679-957 6-262 (276)
186 3i6u_A CDS1, serine/threonine- 100.0 1.3E-37 4.4E-42 355.7 18.1 254 677-957 132-400 (419)
187 2v62_A Serine/threonine-protei 100.0 3.9E-38 1.3E-42 351.2 13.5 263 680-961 37-326 (345)
188 2acx_A G protein-coupled recep 100.0 1.4E-37 4.8E-42 362.3 18.4 251 679-957 183-445 (576)
189 1p4o_A Insulin-like growth fac 100.0 2.8E-38 9.5E-43 349.2 11.7 264 673-963 18-299 (322)
190 3gbz_A Kinase, CMGC CDK; ssgci 100.0 7.9E-38 2.7E-42 346.2 15.2 274 677-957 31-319 (329)
191 1ua2_A CAK, cell division prot 100.0 9.3E-38 3.2E-42 348.3 15.8 276 676-957 6-292 (346)
192 4ejn_A RAC-alpha serine/threon 100.0 5.8E-38 2E-42 362.3 14.5 249 679-957 147-405 (446)
193 4fl3_A Tyrosine-protein kinase 100.0 9.4E-38 3.2E-42 373.5 16.8 251 686-965 375-633 (635)
194 2y7j_A Phosphorylase B kinase 100.0 4.6E-37 1.6E-41 344.7 21.3 258 673-957 87-360 (365)
195 3ttj_A Mitogen-activated prote 100.0 1.4E-37 4.8E-42 359.1 17.6 269 679-957 61-356 (464)
196 3bhy_A Death-associated protei 100.0 3.5E-37 1.2E-41 333.7 19.7 251 680-957 5-266 (283)
197 2jii_A Serine/threonine-protei 100.0 5.5E-38 1.9E-42 351.1 13.6 264 680-966 42-339 (352)
198 3is5_A Calcium-dependent prote 100.0 1.2E-37 4.1E-42 337.5 15.7 250 680-957 22-279 (285)
199 3nsz_A CK II alpha, casein kin 100.0 2.8E-37 9.6E-42 342.4 19.1 266 680-957 36-320 (330)
200 3mi9_A Cell division protein k 100.0 2.1E-37 7E-42 346.5 18.0 274 679-957 16-312 (351)
201 2a19_B Interferon-induced, dou 100.0 1.4E-37 4.8E-42 337.0 16.0 256 678-971 9-282 (284)
202 2jam_A Calcium/calmodulin-depe 100.0 2.9E-37 9.8E-42 338.0 18.5 251 679-957 8-262 (304)
203 3pg1_A Mitogen-activated prote 100.0 2E-37 6.8E-42 348.3 17.7 276 672-957 14-317 (362)
204 1t4h_A Serine/threonine-protei 100.0 4.4E-37 1.5E-41 334.2 19.5 247 681-957 27-283 (290)
205 2id5_A Lingo-1, leucine rich r 100.0 1.7E-36 5.7E-41 354.2 25.7 164 367-554 172-335 (477)
206 1vzo_A Ribosomal protein S6 ki 100.0 6.6E-38 2.3E-42 350.3 12.7 255 679-958 53-323 (355)
207 2clq_A Mitogen-activated prote 100.0 4.7E-37 1.6E-41 334.9 19.1 252 680-957 22-279 (295)
208 1fvr_A Tyrosine-protein kinase 100.0 9.2E-38 3.1E-42 345.7 13.7 257 680-965 25-302 (327)
209 2yfx_A Tyrosine-protein kinase 100.0 1.3E-37 4.5E-42 344.4 14.9 261 679-966 29-307 (327)
210 2qr7_A Ribosomal protein S6 ki 100.0 1.5E-37 5.2E-42 344.7 15.4 254 678-958 20-279 (342)
211 1byg_A CSK, protein (C-termina 100.0 7.4E-38 2.5E-42 338.0 12.4 252 679-964 20-274 (278)
212 3n9x_A Phosphotransferase; mal 100.0 4.8E-37 1.6E-41 352.6 19.8 199 679-882 25-253 (432)
213 3e7e_A HBUB1, BUB1A, mitotic c 100.0 2.4E-37 8.1E-42 347.8 16.9 253 678-965 63-341 (365)
214 2rku_A Serine/threonine-protei 100.0 1.6E-37 5.6E-42 338.3 15.0 250 679-958 14-267 (294)
215 4aaa_A Cyclin-dependent kinase 100.0 1.9E-37 6.5E-42 343.7 15.7 273 679-957 24-307 (331)
216 3rp9_A Mitogen-activated prote 100.0 3E-37 1E-41 357.9 18.1 194 679-877 52-280 (458)
217 3sv0_A Casein kinase I-like; t 100.0 8.2E-37 2.8E-41 352.4 21.5 263 679-964 6-279 (483)
218 3ll6_A Cyclin G-associated kin 100.0 2.5E-37 8.4E-42 344.0 16.5 256 679-965 27-310 (337)
219 3c4z_A Rhodopsin kinase; Ser/T 100.0 2.1E-37 7.2E-42 360.4 16.7 253 680-957 185-449 (543)
220 2vgo_A Serine/threonine-protei 100.0 2.3E-37 7.8E-42 335.3 15.7 247 679-957 13-263 (284)
221 3fme_A Dual specificity mitoge 100.0 2.1E-37 7.2E-42 336.7 15.4 251 679-957 6-267 (290)
222 3eqc_A Dual specificity mitoge 100.0 1.4E-37 4.8E-42 349.2 14.4 264 680-958 33-326 (360)
223 2r5t_A Serine/threonine-protei 100.0 1.9E-37 6.7E-42 347.0 15.4 245 679-953 37-286 (373)
224 3com_A Serine/threonine-protei 100.0 2.7E-37 9.3E-42 340.0 16.0 253 677-957 26-279 (314)
225 2j7t_A Serine/threonine-protei 100.0 6.2E-38 2.1E-42 343.1 10.7 254 678-957 17-276 (302)
226 3byv_A Rhoptry kinase; malaria 100.0 3.9E-38 1.3E-42 355.6 9.1 252 679-968 72-373 (377)
227 2owb_A Serine/threonine-protei 100.0 1.7E-37 5.8E-42 344.5 14.1 249 679-957 40-292 (335)
228 3a7i_A MST3 kinase, serine/thr 100.0 9.4E-37 3.2E-41 333.8 19.6 250 679-958 21-272 (303)
229 3eb0_A Putative uncharacterize 100.0 5.6E-37 1.9E-41 346.9 17.7 271 676-957 3-322 (383)
230 3mwu_A Calmodulin-domain prote 100.0 1E-36 3.6E-41 355.8 20.5 251 679-957 21-277 (486)
231 3an0_A Dual specificity mitoge 100.0 3.6E-37 1.2E-41 343.0 15.8 252 678-957 49-311 (340)
232 3lm5_A Serine/threonine-protei 100.0 5E-37 1.7E-41 339.5 16.7 262 670-957 18-288 (327)
233 2h6d_A 5'-AMP-activated protei 100.0 1.1E-36 3.8E-41 328.4 19.0 248 679-957 10-262 (276)
234 3q60_A ROP5B; pseudokinase, tr 100.0 1.2E-37 4.2E-42 350.9 11.8 253 680-957 62-353 (371)
235 2j0j_A Focal adhesion kinase 1 100.0 3.6E-37 1.2E-41 369.9 16.5 260 678-965 388-653 (656)
236 2ycf_A Serine/threonine-protei 100.0 8.2E-37 2.8E-41 337.3 18.1 253 678-957 8-275 (322)
237 3o6n_A APL1; leucine-rich repe 100.0 9.9E-36 3.4E-40 337.9 27.3 345 26-456 6-352 (390)
238 1u46_A ACK-1, activated CDC42 100.0 4.1E-37 1.4E-41 334.6 15.1 258 680-964 18-285 (291)
239 3lij_A Calcium/calmodulin depe 100.0 8.7E-37 3E-41 357.1 18.9 251 679-957 36-292 (494)
240 2vwi_A Serine/threonine-protei 100.0 2E-37 6.9E-42 339.2 12.5 262 677-957 12-288 (303)
241 1x8b_A WEE1HU, WEE1-like prote 100.0 8.2E-37 2.8E-41 331.8 16.8 244 679-957 10-280 (289)
242 2w5a_A Serine/threonine-protei 100.0 2.7E-37 9.1E-42 333.9 12.8 253 679-959 5-270 (279)
243 2xrw_A Mitogen-activated prote 100.0 1.8E-36 6.2E-41 341.0 20.1 267 679-958 24-320 (371)
244 1cm8_A Phosphorylated MAP kina 100.0 5.3E-37 1.8E-41 344.2 15.7 265 679-957 24-308 (367)
245 3q5i_A Protein kinase; CDPK, m 100.0 8.1E-37 2.8E-41 358.3 17.9 252 678-957 34-302 (504)
246 3nyv_A Calmodulin-domain prote 100.0 5.8E-37 2E-41 358.2 16.4 251 679-957 25-282 (484)
247 1phk_A Phosphorylase kinase; g 100.0 2.2E-36 7.6E-41 330.0 19.8 254 677-957 14-284 (298)
248 2r3i_A Cell division protein k 100.0 1.5E-36 5.2E-41 331.5 18.3 272 680-957 3-284 (299)
249 2pml_X PFPK7, Ser/Thr protein 100.0 7.4E-37 2.5E-41 341.8 15.6 266 679-957 30-323 (348)
250 1wak_A Serine/threonine-protei 100.0 1.4E-36 4.9E-41 346.1 17.8 270 679-957 36-392 (397)
251 3kvw_A DYRK2, dual specificity 100.0 1.7E-36 5.8E-41 347.2 17.8 197 679-884 96-302 (429)
252 3pfq_A PKC-B, PKC-beta, protei 100.0 2.2E-36 7.7E-41 364.1 19.4 250 678-957 339-598 (674)
253 2x7f_A TRAF2 and NCK-interacti 100.0 7.5E-37 2.6E-41 338.4 13.9 260 670-957 14-287 (326)
254 3qyz_A Mitogen-activated prote 100.0 2.7E-36 9.4E-41 338.9 18.7 272 679-957 26-314 (364)
255 2i6l_A Mitogen-activated prote 100.0 1E-36 3.5E-41 336.4 14.9 267 679-957 10-306 (320)
256 2fst_X Mitogen-activated prote 100.0 5.8E-37 2E-41 343.5 12.5 265 679-957 28-312 (367)
257 1blx_A Cyclin-dependent kinase 100.0 2E-36 6.7E-41 335.1 16.3 270 678-957 9-297 (326)
258 4e7w_A Glycogen synthase kinas 100.0 2.1E-36 7.3E-41 342.8 15.9 267 680-957 40-322 (394)
259 3cek_A Dual specificity protei 100.0 3.4E-36 1.2E-40 330.9 16.8 254 677-958 25-294 (313)
260 1j1b_A Glycogen synthase kinas 100.0 3.5E-36 1.2E-40 343.8 17.0 267 680-957 54-337 (420)
261 3rgf_A Cyclin-dependent kinase 100.0 2.5E-36 8.4E-41 344.4 15.1 270 682-957 22-334 (405)
262 2wtk_C Serine/threonine-protei 100.0 1.6E-35 5.5E-40 324.4 21.0 250 679-957 4-264 (305)
263 2b9h_A MAP kinase FUS3, mitoge 100.0 3.6E-36 1.2E-40 336.9 15.9 272 679-957 10-306 (353)
264 2y4i_B KSR2, HKSR2, kinase sup 100.0 6.5E-37 2.2E-41 337.8 9.6 261 676-965 29-304 (319)
265 1z57_A Dual specificity protei 100.0 1.1E-35 3.8E-40 330.9 19.5 269 679-957 13-329 (339)
266 4exu_A Mitogen-activated prote 100.0 2.9E-36 1E-40 339.3 14.7 264 679-957 41-324 (371)
267 2wei_A Calmodulin-domain prote 100.0 9.5E-36 3.2E-40 323.0 17.8 252 678-957 20-277 (287)
268 1zy4_A Serine/threonine-protei 100.0 4.8E-36 1.6E-40 328.2 15.4 252 679-957 5-284 (303)
269 3oja_B Anopheles plasmodium-re 100.0 8.5E-35 2.9E-39 348.5 27.1 311 66-480 48-358 (597)
270 3e3p_A Protein kinase, putativ 100.0 1.2E-35 4E-40 333.7 18.2 279 673-957 16-315 (360)
271 2vx3_A Dual specificity tyrosi 100.0 3.2E-35 1.1E-39 332.4 21.7 201 677-884 51-261 (382)
272 2rio_A Serine/threonine-protei 100.0 7.3E-36 2.5E-40 342.7 15.3 249 682-957 17-296 (434)
273 3aln_A Dual specificity mitoge 100.0 4E-36 1.4E-40 332.6 12.6 254 679-957 21-286 (327)
274 3a99_A Proto-oncogene serine/t 100.0 2.3E-36 7.7E-41 333.1 9.3 243 677-957 40-294 (320)
275 2dyl_A Dual specificity mitoge 100.0 1.1E-35 3.9E-40 327.7 14.8 252 679-957 24-284 (318)
276 3o6n_A APL1; leucine-rich repe 100.0 1.2E-34 4.1E-39 329.0 23.5 334 195-603 44-378 (390)
277 2iwi_A Serine/threonine-protei 100.0 3.4E-36 1.2E-40 330.9 9.8 246 674-957 25-284 (312)
278 3fhr_A MAP kinase-activated pr 100.0 1.2E-35 4.2E-40 329.4 14.3 254 678-958 26-289 (336)
279 1q8y_A SR protein kinase; tran 100.0 9.2E-36 3.1E-40 336.4 13.4 269 680-957 19-334 (373)
280 2eu9_A Dual specificity protei 100.0 3.9E-35 1.3E-39 328.8 18.1 269 679-957 18-334 (355)
281 3p23_A Serine/threonine-protei 100.0 7.2E-36 2.5E-40 341.5 12.2 249 680-957 24-284 (432)
282 3coi_A Mitogen-activated prote 100.0 1.3E-35 4.3E-40 332.2 13.5 264 679-957 23-306 (353)
283 3oja_B Anopheles plasmodium-re 100.0 1.5E-34 5.2E-39 346.3 22.6 334 166-603 50-384 (597)
284 1ogq_A PGIP-2, polygalacturona 100.0 4.6E-35 1.6E-39 321.0 16.2 254 349-604 52-309 (313)
285 4fcg_A Uncharacterized protein 100.0 8.2E-35 2.8E-39 320.9 16.0 268 1-305 31-315 (328)
286 3qa8_A MGC80376 protein; kinas 100.0 1.6E-35 5.5E-40 347.8 10.9 268 679-955 13-296 (676)
287 4fmz_A Internalin; leucine ric 100.0 7.6E-33 2.6E-37 309.1 28.6 307 65-456 40-346 (347)
288 4fmz_A Internalin; leucine ric 100.0 4.4E-33 1.5E-37 311.0 26.5 174 88-304 39-212 (347)
289 3uqc_A Probable conserved tran 100.0 6E-34 2.1E-38 307.7 18.2 235 680-967 31-269 (286)
290 2pzi_A Probable serine/threoni 100.0 3.9E-34 1.3E-38 347.5 15.9 242 680-965 80-330 (681)
291 3m2w_A MAP kinase-activated pr 100.0 1.4E-33 4.8E-38 307.7 18.0 231 679-957 16-257 (299)
292 3dzo_A Rhoptry kinase domain; 100.0 1.4E-34 4.9E-39 329.7 10.3 250 680-967 78-376 (413)
293 2ft3_A Biglycan; proteoglycan, 100.0 2.4E-32 8.2E-37 302.7 24.6 268 243-574 54-331 (332)
294 1xku_A Decorin; proteoglycan, 100.0 4.3E-32 1.5E-36 300.5 25.8 269 243-574 52-330 (330)
295 2ft3_A Biglycan; proteoglycan, 100.0 3.8E-32 1.3E-36 301.1 25.4 296 143-550 34-331 (332)
296 1xku_A Decorin; proteoglycan, 100.0 2E-31 6.9E-36 295.1 27.8 231 69-341 52-282 (330)
297 2vuw_A Serine/threonine-protei 100.0 8.1E-34 2.8E-38 315.2 5.5 245 679-957 19-332 (336)
298 1z7x_W Ribonuclease inhibitor; 100.0 1.6E-35 5.5E-40 344.5 -10.3 371 93-529 3-412 (461)
299 1z7x_W Ribonuclease inhibitor; 100.0 1.4E-35 4.9E-40 345.0 -12.5 287 244-554 86-413 (461)
300 2z80_A TOLL-like receptor 2, v 100.0 1.9E-29 6.5E-34 282.0 17.2 285 27-339 24-318 (353)
301 3ogk_B Coronatine-insensitive 100.0 1.4E-31 4.9E-36 321.6 -1.5 433 84-573 64-548 (592)
302 3ogk_B Coronatine-insensitive 100.0 2E-31 6.7E-36 320.4 -1.8 463 31-549 40-548 (592)
303 2z80_A TOLL-like receptor 2, v 100.0 1.8E-28 6.2E-33 274.0 21.6 276 93-432 31-314 (353)
304 3g06_A SSPH2 (leucine-rich rep 100.0 6.1E-29 2.1E-33 294.4 18.3 285 29-443 18-308 (622)
305 2z66_A Variable lymphocyte rec 100.0 6.5E-29 2.2E-33 271.8 16.8 278 246-581 10-292 (306)
306 3oja_A Leucine-rich immune mol 100.0 1.2E-29 4.3E-34 294.8 9.5 192 368-571 77-270 (487)
307 4fcg_A Uncharacterized protein 100.0 3.2E-28 1.1E-32 268.1 19.2 226 321-576 80-314 (328)
308 2z66_A Variable lymphocyte rec 100.0 3.2E-28 1.1E-32 266.3 17.7 251 294-580 10-265 (306)
309 3zyi_A Leucine-rich repeat-con 100.0 8.4E-28 2.9E-32 278.0 21.7 242 53-335 62-303 (452)
310 1ozn_A Reticulon 4 receptor; N 100.0 8.2E-28 2.8E-32 260.1 19.1 193 367-560 76-269 (285)
311 3zyj_A Leucine-rich repeat-con 100.0 1.7E-27 5.7E-32 274.5 22.6 229 349-579 66-295 (440)
312 1wwl_A Monocyte differentiatio 100.0 4.3E-30 1.5E-34 281.6 0.4 260 31-304 29-309 (312)
313 3zyi_A Leucine-rich repeat-con 100.0 2.1E-27 7.1E-32 274.7 22.9 231 348-580 76-307 (452)
314 1ozn_A Reticulon 4 receptor; N 100.0 4.8E-28 1.6E-32 261.9 16.3 210 371-580 32-242 (285)
315 3o53_A Protein LRIM1, AGAP0063 100.0 3.9E-29 1.3E-33 274.7 7.5 266 246-581 13-281 (317)
316 3zyj_A Leucine-rich repeat-con 100.0 1.9E-27 6.6E-32 273.9 21.5 245 50-335 48-292 (440)
317 3o53_A Protein LRIM1, AGAP0063 100.0 3.7E-29 1.3E-33 274.8 6.6 247 242-558 33-282 (317)
318 3g06_A SSPH2 (leucine-rich rep 99.9 1.3E-26 4.5E-31 274.5 27.2 268 70-467 41-308 (622)
319 1wwl_A Monocyte differentiatio 99.9 4.8E-29 1.6E-33 273.3 5.8 203 369-577 93-310 (312)
320 2o6q_A Variable lymphocyte rec 99.9 1.6E-26 5.4E-31 247.6 19.0 171 30-211 2-172 (270)
321 2p1m_B Transport inhibitor res 99.9 6.2E-30 2.1E-34 307.6 -10.2 207 368-576 311-544 (594)
322 2p1m_B Transport inhibitor res 99.9 4.6E-30 1.6E-34 308.7 -14.5 466 31-549 33-541 (594)
323 4azs_A Methyltransferase WBDD; 99.9 2.5E-27 8.6E-32 279.0 8.1 185 687-880 241-437 (569)
324 3oja_A Leucine-rich immune mol 99.9 1.5E-26 5.2E-31 268.8 10.8 237 242-548 33-271 (487)
325 2z62_A TOLL-like receptor 4, v 99.9 2.4E-25 8E-30 239.5 18.5 210 371-581 28-242 (276)
326 2z62_A TOLL-like receptor 4, v 99.9 7E-25 2.4E-29 235.8 19.7 217 60-305 21-238 (276)
327 2o6q_A Variable lymphocyte rec 99.9 2.5E-24 8.4E-29 230.6 20.5 206 372-580 17-222 (270)
328 3rfs_A Internalin B, repeat mo 99.9 1.3E-24 4.4E-29 233.0 15.4 200 371-581 41-240 (272)
329 1p9a_G Platelet glycoprotein I 99.9 5.4E-24 1.8E-28 229.9 18.1 205 367-578 6-210 (290)
330 3rfs_A Internalin B, repeat mo 99.9 4.6E-24 1.6E-28 228.6 16.7 207 347-564 41-247 (272)
331 1p9a_G Platelet glycoprotein I 99.9 1.1E-23 3.7E-28 227.4 17.6 208 390-603 5-212 (290)
332 3m19_A Variable lymphocyte rec 99.9 5.8E-24 2E-28 225.0 14.6 193 30-235 2-194 (251)
333 3en9_A Glycoprotease, O-sialog 99.9 9.4E-25 3.2E-29 255.6 8.6 186 682-882 338-539 (540)
334 2xwt_C Thyrotropin receptor; s 99.9 2.2E-23 7.6E-28 218.9 15.3 203 60-301 25-236 (239)
335 3goz_A Leucine-rich repeat-con 99.9 3.3E-24 1.1E-28 240.0 6.0 265 201-532 3-301 (362)
336 2ca6_A RAN GTPase-activating p 99.9 3.5E-25 1.2E-29 250.6 -2.5 265 245-556 11-320 (386)
337 4glp_A Monocyte differentiatio 99.9 4E-23 1.4E-27 226.0 12.5 200 371-576 91-307 (310)
338 2ca6_A RAN GTPase-activating p 99.9 6.8E-25 2.3E-29 248.2 -1.7 246 314-580 24-320 (386)
339 2xwt_C Thyrotropin receptor; s 99.9 7.3E-23 2.5E-27 214.9 13.9 196 372-573 32-236 (239)
340 3m19_A Variable lymphocyte rec 99.9 2.5E-22 8.6E-27 212.4 17.3 181 371-554 14-194 (251)
341 3goz_A Leucine-rich repeat-con 99.9 3.6E-24 1.2E-28 239.7 2.9 262 247-556 2-301 (362)
342 1h6u_A Internalin H; cell adhe 99.9 1.7E-22 6E-27 220.3 14.5 173 367-553 59-231 (308)
343 4ay9_X Follicle-stimulating ho 99.9 5.4E-22 1.9E-26 220.8 18.5 245 31-331 7-255 (350)
344 4glp_A Monocyte differentiatio 99.9 1.3E-22 4.3E-27 222.0 12.9 230 291-553 64-308 (310)
345 2ast_B S-phase kinase-associat 99.9 2.7E-23 9.2E-28 230.5 7.3 252 245-581 49-311 (336)
346 2o6s_A Variable lymphocyte rec 99.9 5.5E-22 1.9E-26 203.3 16.1 188 29-268 3-190 (208)
347 2ast_B S-phase kinase-associat 99.9 3.2E-23 1.1E-27 229.9 6.3 179 393-573 91-282 (336)
348 1h6u_A Internalin H; cell adhe 99.9 5.5E-22 1.9E-26 216.4 15.1 196 367-578 37-232 (308)
349 4ay9_X Follicle-stimulating ho 99.9 4E-21 1.4E-25 213.8 20.6 241 96-382 12-257 (350)
350 3cvr_A Invasion plasmid antige 99.9 2.8E-22 9.7E-27 234.3 10.9 210 29-291 39-254 (571)
351 2o6s_A Variable lymphocyte rec 99.8 1.1E-20 3.6E-25 193.7 17.1 181 374-564 10-190 (208)
352 1zar_A RIO2 kinase; serine kin 99.8 1.5E-21 5E-26 209.3 8.0 150 675-854 85-252 (282)
353 3cvr_A Invasion plasmid antige 99.8 2.8E-20 9.7E-25 217.4 16.3 189 94-323 60-255 (571)
354 3e6j_A Variable lymphocyte rec 99.8 6E-20 2E-24 190.9 16.7 163 26-211 12-174 (229)
355 4b8c_D Glucose-repressible alc 99.8 6.1E-21 2.1E-25 231.7 5.6 205 29-253 159-369 (727)
356 2v70_A SLIT-2, SLIT homolog 2 99.8 4.1E-20 1.4E-24 190.7 9.9 136 445-580 34-170 (220)
357 2xot_A Amphoterin-induced prot 99.8 1.6E-19 5.5E-24 201.6 11.7 177 374-553 21-203 (361)
358 2v9t_B SLIT homolog 2 protein 99.8 3.7E-19 1.3E-23 183.5 13.3 152 398-552 14-165 (220)
359 1h6t_A Internalin B; cell adhe 99.8 4.4E-19 1.5E-23 191.5 14.0 172 368-553 43-214 (291)
360 1h6t_A Internalin B; cell adhe 99.8 5.1E-19 1.7E-23 191.0 14.2 172 90-281 43-214 (291)
361 1m9s_A Internalin B; cell inva 99.8 1.7E-19 5.8E-24 213.4 11.2 178 90-287 40-217 (605)
362 2v70_A SLIT-2, SLIT homolog 2 99.8 6.7E-19 2.3E-23 181.6 13.6 157 374-556 14-170 (220)
363 3e6j_A Variable lymphocyte rec 99.8 1.3E-18 4.3E-23 180.9 15.0 153 397-553 21-173 (229)
364 2v9t_B SLIT homolog 2 protein 99.8 9.8E-19 3.4E-23 180.4 13.8 152 374-528 14-165 (220)
365 2xot_A Amphoterin-induced prot 99.8 4.5E-19 1.5E-23 198.0 11.2 175 351-528 22-202 (361)
366 1m9s_A Internalin B; cell inva 99.8 7.1E-19 2.4E-23 208.1 13.0 186 367-566 39-224 (605)
367 1dce_A Protein (RAB geranylger 99.8 1.9E-20 6.4E-25 220.3 -4.7 191 368-581 346-551 (567)
368 1dce_A Protein (RAB geranylger 99.7 2.7E-20 9.1E-25 219.0 -4.9 36 242-278 348-383 (567)
369 4b8c_D Glucose-repressible alc 99.7 9.5E-19 3.2E-23 212.5 8.2 191 376-577 206-405 (727)
370 1xeu_A Internalin C; cellular 99.7 1.7E-18 5.8E-23 183.8 9.1 170 67-257 17-186 (263)
371 1xeu_A Internalin C; cellular 99.7 1.7E-18 5.7E-23 183.9 8.4 171 369-554 17-187 (263)
372 4ezg_A Putative uncharacterize 99.7 8.2E-18 2.8E-22 170.4 11.3 151 418-576 43-194 (197)
373 4ezg_A Putative uncharacterize 99.7 6.5E-18 2.2E-22 171.2 10.1 151 395-553 44-195 (197)
374 1w8a_A SLIT protein; signaling 99.7 5.2E-17 1.8E-21 163.6 13.8 113 444-556 30-143 (192)
375 1w8a_A SLIT protein; signaling 99.7 6.5E-17 2.2E-21 162.9 13.3 153 420-577 30-184 (192)
376 1zth_A RIO1 serine protein kin 99.7 2.1E-17 7.3E-22 174.8 10.1 137 682-830 49-219 (258)
377 3sb4_A Hypothetical leucine ri 99.7 2.9E-17 9.9E-22 180.9 7.2 39 266-305 100-138 (329)
378 3sb4_A Hypothetical leucine ri 99.7 4.1E-17 1.4E-21 179.7 8.3 199 366-569 119-327 (329)
379 2o6r_A Variable lymphocyte rec 99.7 6.8E-16 2.3E-20 153.3 14.4 135 30-181 4-138 (177)
380 2ell_A Acidic leucine-rich nuc 99.6 2.9E-16 1E-20 154.5 9.9 133 443-577 24-161 (168)
381 2wfh_A SLIT homolog 2 protein 99.6 1.4E-15 5E-20 152.9 14.4 125 50-180 15-139 (193)
382 2wfh_A SLIT homolog 2 protein 99.6 8.6E-16 2.9E-20 154.5 11.7 109 468-577 32-140 (193)
383 2ell_A Acidic leucine-rich nuc 99.6 9.3E-16 3.2E-20 150.9 11.4 132 395-528 24-160 (168)
384 2je0_A Acidic leucine-rich nuc 99.6 3.3E-16 1.1E-20 150.8 6.5 127 443-571 17-148 (149)
385 2o6r_A Variable lymphocyte rec 99.6 1.7E-15 5.7E-20 150.5 11.5 113 468-580 29-141 (177)
386 2je0_A Acidic leucine-rich nuc 99.6 1E-15 3.6E-20 147.2 7.5 126 420-547 18-148 (149)
387 4fdw_A Leucine rich hypothetic 99.6 4.2E-14 1.4E-18 158.9 21.3 172 93-304 113-284 (401)
388 4fdw_A Leucine rich hypothetic 99.6 1.8E-14 6.2E-19 161.9 17.9 201 367-575 176-382 (401)
389 4gyi_A RIO2 kinase; protein ki 99.6 1.3E-15 4.4E-20 166.5 5.4 137 681-831 96-266 (397)
390 4fs7_A Uncharacterized protein 99.5 8.1E-14 2.8E-18 157.4 19.3 144 371-522 230-373 (394)
391 1a9n_A U2A', U2A'; complex (nu 99.5 5.5E-15 1.9E-19 146.5 7.6 134 438-577 14-154 (176)
392 4fs7_A Uncharacterized protein 99.5 2.8E-13 9.6E-18 153.0 20.5 145 367-520 249-393 (394)
393 1ds9_A Outer arm dynein; leuci 99.5 9.4E-17 3.2E-21 162.7 -7.4 134 392-530 15-155 (198)
394 1ds9_A Outer arm dynein; leuci 99.5 2.1E-16 7.1E-21 160.2 -5.4 155 415-576 14-185 (198)
395 1a9n_A U2A', U2A'; complex (nu 99.5 2.9E-14 9.9E-19 141.3 8.9 132 391-552 15-153 (176)
396 3g39_A Variable lymphocyte rec 99.5 4.9E-14 1.7E-18 138.5 10.2 89 491-579 30-118 (170)
397 2r9u_A Variable lymphocyte rec 99.5 1.2E-13 4E-18 136.2 10.3 104 446-552 15-118 (174)
398 3g39_A Variable lymphocyte rec 99.4 5E-13 1.7E-17 131.3 11.2 108 445-555 11-118 (170)
399 2r9u_A Variable lymphocyte rec 99.4 1E-12 3.5E-17 129.5 12.4 104 48-155 15-118 (174)
400 4gt6_A Cell surface protein; l 99.3 2.1E-10 7.1E-15 129.3 24.2 131 366-527 260-390 (394)
401 3un9_A NLR family member X1; l 99.3 7.2E-14 2.4E-18 155.5 -6.9 66 488-553 180-253 (372)
402 3un9_A NLR family member X1; l 99.3 7.3E-14 2.5E-18 155.4 -7.1 166 370-535 71-259 (372)
403 2ifg_A High affinity nerve gro 99.2 8.4E-12 2.9E-16 138.3 8.7 133 446-581 11-146 (347)
404 4gt6_A Cell surface protein; l 99.2 3.6E-10 1.2E-14 127.4 21.4 334 135-552 56-391 (394)
405 2ifg_A High affinity nerve gro 99.2 1.4E-11 4.6E-16 136.7 9.3 132 423-557 12-146 (347)
406 3tm0_A Aminoglycoside 3'-phosp 99.1 1.1E-10 3.7E-15 123.8 10.6 148 674-828 8-212 (263)
407 1nd4_A Aminoglycoside 3'-phosp 99.0 5E-10 1.7E-14 118.5 8.5 137 681-829 21-214 (264)
408 4h09_A Hypothetical leucine ri 99.0 4.2E-08 1.4E-12 109.8 23.2 45 118-165 46-90 (379)
409 4h09_A Hypothetical leucine ri 98.9 7.5E-08 2.6E-12 107.8 23.5 285 242-547 45-341 (379)
410 2ra8_A Uncharacterized protein 98.9 7.5E-10 2.6E-14 121.8 6.1 58 115-175 169-227 (362)
411 2ra8_A Uncharacterized protein 98.9 6E-10 2.1E-14 122.6 2.7 159 411-574 164-341 (362)
412 3dxp_A Putative acyl-COA dehyd 98.8 1E-08 3.4E-13 113.9 10.2 142 684-829 42-248 (359)
413 3rw6_A Nuclear RNA export fact 98.8 8.6E-11 2.9E-15 122.4 -6.8 168 31-202 76-257 (267)
414 3sg8_A APH(2'')-ID; antibiotic 98.8 5E-09 1.7E-13 113.4 6.3 186 685-881 25-287 (304)
415 3rw6_A Nuclear RNA export fact 98.4 1.2E-08 4E-13 106.3 -2.5 80 488-569 167-257 (267)
416 3r70_A Aminoglycoside phosphot 98.4 1.1E-06 3.7E-11 95.6 12.4 137 681-830 38-238 (320)
417 1io0_A Tropomodulin; LRR prote 98.3 1.5E-07 5.3E-12 93.2 1.3 47 386-432 27-78 (185)
418 1io0_A Tropomodulin; LRR prote 98.3 1.9E-07 6.7E-12 92.4 1.8 91 366-456 31-136 (185)
419 3tdw_A Gentamicin resistance p 98.2 7.9E-06 2.7E-10 88.0 12.2 136 685-829 24-224 (306)
420 4gkh_A Aminoglycoside 3'-phosp 98.1 1.4E-05 4.6E-10 84.6 13.0 135 687-829 31-223 (272)
421 3d1u_A Putative fructosamine-3 98.1 1.2E-05 4.2E-10 85.4 11.8 76 684-763 19-97 (288)
422 3ovc_A Hygromycin-B 4-O-kinase 98.0 2.9E-05 1E-09 85.5 11.5 142 683-830 44-244 (362)
423 3ats_A Putative uncharacterize 97.9 1.2E-05 4.1E-10 88.8 7.6 79 686-764 26-121 (357)
424 3e4g_A ATP synthase subunit S, 97.7 2.6E-05 8.9E-10 75.0 4.3 92 363-454 53-150 (176)
425 2q83_A YTAA protein; 2635576, 97.6 0.00032 1.1E-08 76.7 11.9 138 686-828 38-251 (346)
426 2olc_A MTR kinase, methylthior 97.5 0.00026 8.8E-09 79.3 10.9 75 685-761 35-120 (397)
427 3e4g_A ATP synthase subunit S, 97.5 1.6E-05 5.4E-10 76.5 0.3 84 467-550 61-150 (176)
428 2pyw_A Uncharacterized protein 97.4 0.00017 5.9E-09 81.3 7.5 80 798-878 231-313 (420)
429 3jr1_A Putative fructosamine-3 97.3 0.0011 3.7E-08 71.0 11.4 137 684-825 40-232 (312)
430 3f7w_A Putative fructosamine-3 97.3 0.0013 4.3E-08 70.0 11.5 78 681-762 16-96 (288)
431 1pgv_A TMD-1, tropomodulin TMD 97.1 0.00013 4.3E-09 71.6 2.1 92 243-334 70-169 (197)
432 1pgv_A TMD-1, tropomodulin TMD 97.1 0.00013 4.5E-09 71.5 1.4 17 264-280 38-55 (197)
433 2ppq_A HSK, HK, homoserine kin 96.8 0.0033 1.1E-07 67.8 10.0 158 668-828 5-216 (322)
434 3dxq_A Choline/ethanolamine ki 96.7 0.0033 1.1E-07 67.2 9.0 129 685-830 23-203 (301)
435 3rfe_A Platelet glycoprotein I 96.6 0.0032 1.1E-07 57.6 6.3 55 122-179 12-67 (130)
436 3feg_A Choline/ethanolamine ki 96.5 0.0044 1.5E-07 68.1 8.3 140 685-829 55-254 (379)
437 1zyl_A Hypothetical protein YI 96.5 0.015 5.2E-07 62.7 12.4 158 668-829 9-223 (328)
438 3rfe_A Platelet glycoprotein I 96.5 0.0042 1.4E-07 56.8 6.5 55 73-130 12-67 (130)
439 1nw1_A Choline kinase (49.2 KD 96.4 0.0037 1.3E-07 70.3 7.3 72 685-762 78-158 (429)
440 3csv_A Aminoglycoside phosphot 96.4 0.014 4.9E-07 63.1 11.8 140 686-830 24-218 (333)
441 2qg7_A Ethanolamine kinase PV0 96.1 0.012 3.9E-07 66.6 9.0 73 685-762 113-187 (458)
442 2yle_A Protein spire homolog 1 96.0 0.06 2E-06 52.9 12.1 119 762-897 34-152 (229)
443 3i1a_A Spectinomycin phosphotr 95.8 0.037 1.3E-06 60.0 10.9 33 798-830 205-237 (339)
444 3c5i_A Choline kinase; choline 95.7 0.012 4E-07 64.9 6.9 72 686-762 39-120 (369)
445 3f2s_A CK, chetk-alpha, cholin 95.1 0.048 1.6E-06 60.0 8.8 140 686-829 58-280 (401)
446 3mes_A Choline kinase; malaria 93.5 0.092 3.1E-06 58.4 6.8 73 685-762 75-156 (424)
447 3g15_A CK, chetk-alpha, cholin 87.4 1 3.5E-05 49.7 7.9 29 801-829 246-280 (401)
448 4ann_A ESSB; membrane protein, 68.8 8.2 0.00028 37.8 6.5 121 734-887 43-163 (215)
449 4ano_A ESSB; membrane protein, 66.9 18 0.00061 35.5 8.4 115 734-883 48-164 (219)
450 3cxl_A N-chimerin; SH2, RHO-GA 66.6 0.63 2.2E-05 52.4 -2.3 59 684-745 146-213 (463)
451 2jwa_A Receptor tyrosine-prote 33.9 8.9 0.00031 26.7 0.1 7 643-649 32-38 (44)
452 2lz0_A Uncharacterized protein 32.4 42 0.0014 28.2 4.1 45 255-300 8-52 (100)
453 2x6h_A GH13170P, VPS34, phosph 28.8 4.9E+02 0.017 30.3 13.4 45 777-828 529-575 (696)
454 2lz0_A Uncharacterized protein 25.7 1.3E+02 0.0045 25.1 6.1 37 366-403 15-51 (100)
No 1
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=1.8e-81 Score=775.40 Aligned_cols=588 Identities=31% Similarity=0.490 Sum_probs=439.4
Q ss_pred ChHHHHhhhccCCCcccCCCCCCCCCCCCCCcceEEEEEeeCCCCcEEEEecCCCCCCCc---CC---------------
Q 048430 1 ALVQLKARISLDPHNFFANNWNLSPTNTSASVCNWVGVTCSIRHGRVAALSLPNLSLGGT---LP--------------- 62 (973)
Q Consensus 1 al~~~k~~~~~~~~~~~~~~w~~~~~~~~~~~c~w~gv~C~~~~~~v~~l~l~~~~l~g~---~~--------------- 62 (973)
|||+||++++ ||. .+++ |+. ++|||+|.||+|+ ++||++|||++.++.|. +|
T Consensus 16 all~~k~~~~-~~~-~l~~-W~~-----~~~~C~w~gv~C~--~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~~l~~~ 85 (768)
T 3rgz_A 16 QLISFKDVLP-DKN-LLPD-WSS-----NKNPCTFDGVTCR--DDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESLFLS 85 (768)
T ss_dssp HHHHHHTTCS-CTT-SSTT-CCT-----TSCGGGSTTEEEE--TTEEEEEECTTSCCCEEHHHHHHHTTTCTTCCEEECT
T ss_pred HHHHHHhhCC-Ccc-cccC-CCC-----CCCCcCCcceEEC--CCcEEEEECCCCCcCCccCccChhHhccCcccccCCc
Confidence 7999999997 887 7775 864 5799999999998 69999999999999997 44
Q ss_pred --------CCCCCCCCCcEEEecCCCCCCCCCc--ccccccCCcEEEccCCCCCCCCCccccCCCCCccEEEeeCcccCC
Q 048430 63 --------PHVGNLSFLVSLNISGNSFYDTLPN--ELWHMRRLKIIDFSSNSLSGSLPGDMCNSFTQLESFDVSSNKITG 132 (973)
Q Consensus 63 --------~~l~~l~~L~~L~L~~n~~~~~~p~--~~~~l~~L~~L~Ls~n~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~ 132 (973)
+.++.+++|++|+|++|.+.|.+|. .++++++|++|||++|.+.+.+|..++..+++|++|||++|++++
T Consensus 86 ~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~ 165 (768)
T 3rgz_A 86 NSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISG 165 (768)
T ss_dssp TSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSCCEE
T ss_pred CCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCCccCC
Confidence 5788889999999999999888888 899999999999999999988888777788999999999999988
Q ss_pred CCCcc---ccCCCCCCeEEccCccccccCCccccCCCCCccEEEcccccccccCCCCCCCccccCCCCccEEEecCCccc
Q 048430 133 EFPSA---IVNISSLKSIRLDNNSLSGSFPTDLCTRLPSLVQLRLLGNNITGRIPNREIPNEIGNLHNLKILDLGGNNIA 209 (973)
Q Consensus 133 ~~p~~---~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~p~~l~~l~~L~~L~L~~N~l~ 209 (973)
..|.. +.++++|++|++++|.+++.+|. ..+++|++|+|++|++++. +|. ++++++|++|+|++|+++
T Consensus 166 ~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~---~~l~~L~~L~Ls~n~l~~~-----~~~-l~~l~~L~~L~Ls~n~l~ 236 (768)
T 3rgz_A 166 ANVVGWVLSDGCGELKHLAISGNKISGDVDV---SRCVNLEFLDVSSNNFSTG-----IPF-LGDCSALQHLDISGNKLS 236 (768)
T ss_dssp ETHHHHHHTTCCTTCCEEECCSSEEESCCBC---TTCTTCCEEECCSSCCCSC-----CCB-CTTCCSCCEEECCSSCCC
T ss_pred cCChhhhhhccCCCCCEEECCCCcccccCCc---ccCCcCCEEECcCCcCCCC-----Ccc-cccCCCCCEEECcCCcCC
Confidence 77766 77788888888888888765553 5677788888888887753 333 777777888888888777
Q ss_pred CccccccccCCcceeEEeecccccccCCCCCCccccceeeeccccccccCcchhccc-CcccEEEeccccccccCCCccc
Q 048430 210 GLIPSMIFNNSNMVAILLYGNHLSGHLPSSIYLPNLENLFLWKNNLSGIIPDSICNA-SEATILELSSNLFSGLVPNTFG 288 (973)
Q Consensus 210 ~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l-~~L~~L~L~~N~i~~~~~~~~~ 288 (973)
+.+|..+..+++|+.|++++|.+++.+|.. .+++|++|+|++|++++.+|..+... ++|++|+|++|.+++.+|..|+
T Consensus 237 ~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~-~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~ 315 (768)
T 3rgz_A 237 GDFSRAISTCTELKLLNISSNQFVGPIPPL-PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFG 315 (768)
T ss_dssp SCHHHHTTTCSSCCEEECCSSCCEESCCCC-CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGG
T ss_pred CcccHHHhcCCCCCEEECCCCcccCccCcc-ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHh
Confidence 777777777777777777777776655543 44555555555555554444444443 4455555555555444444444
Q ss_pred cc-------------------------ccceEEEccCCcCCC-CCCCcchhh-----------------hhhhcc--CCc
Q 048430 289 NC-------------------------RQLQILSLGDNQLTT-GSSAQGQIF-----------------YSSLAK--CRY 323 (973)
Q Consensus 289 ~l-------------------------~~L~~L~L~~N~l~~-~~~~~~~~~-----------------~~~l~~--l~~ 323 (973)
++ ++|++|++++|++++ .+....... +..+.. +++
T Consensus 316 ~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~ 395 (768)
T 3rgz_A 316 SCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNT 395 (768)
T ss_dssp GCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCC
T ss_pred cCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCC
Confidence 44 445555555554442 111100000 000111 333
Q ss_pred CcEEEccCCCCCCCCCCcccccccccceeecccCCccccCCCCCCCCCcccEEEeecCccccccCcccCCCCCCCEEEcc
Q 048430 324 LRVLVLDTNPLKGVIPNSIGNLSTSLENFYAGSSQLSGGIPVGFGNLSNLLVLSLVNNELAGAIPTVLGKLQKLQGLDLN 403 (973)
Q Consensus 324 L~~L~L~~N~l~~~~p~~~~~l~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls 403 (973)
|+.|++++|.+.+.+|..+..+ ..|+.|++++|.+++.+|..|+.+++|++|++++|.+.+.+|..+..+++|++|+|+
T Consensus 396 L~~L~L~~n~l~~~~p~~l~~l-~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~ 474 (768)
T 3rgz_A 396 LQELYLQNNGFTGKIPPTLSNC-SELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILD 474 (768)
T ss_dssp CCEEECCSSEEEEECCGGGGGC-TTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECC
T ss_pred ccEEECCCCccccccCHHHhcC-CCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEec
Confidence 4444444444444444444443 345666666666666666666666666666666666666666667777777777777
Q ss_pred CCcCCCCCchhhhccCcCCeeecCCccccCcCcccccCcCCCCeeeccCCCCCCCCcccccccccccEEEecCCcccCCc
Q 048430 404 SNKLKGFIPTDLCKLEKLNTLLSNNNALQGQIPTCLANLTSLRHLDFRSNSLNSTIPSTFWSLKYILAVDFSLNSLSGSL 483 (973)
Q Consensus 404 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~ 483 (973)
+|++++.+|..+.++++|++|++++|++++.+|..++.+++|++|+|++|++++.+|..+..+++|+.||+++|+++|.+
T Consensus 475 ~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~i 554 (768)
T 3rgz_A 475 FNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTI 554 (768)
T ss_dssp SSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBC
T ss_pred CCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcC
Confidence 77777777777777777777777777777777777777777777777777777777777777888888888888777666
Q ss_pred CcCc----------------------------------------------------------------------cCCCCC
Q 048430 484 PLNI----------------------------------------------------------------------GNLEAL 493 (973)
Q Consensus 484 p~~~----------------------------------------------------------------------~~l~~L 493 (973)
|..+ +.+++|
T Consensus 555 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L 634 (768)
T 3rgz_A 555 PAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSM 634 (768)
T ss_dssp CGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCC
T ss_pred ChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccc
Confidence 6433 335678
Q ss_pred CeEEccCCcCcccCCcccccCCcCCEEEcccCccccCCCCCcccccccccccccccccCCCCCccccccccccccccCCC
Q 048430 494 GGLNLTGNQLSGYIPSSIGNLKNLDWLALARNAFQGPIPQSFGSLISLQSLDLSGNNISGEIPKSLEKLSRLVDFNVSFN 573 (973)
Q Consensus 494 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~ls~N 573 (973)
+.|+|++|+++|.+|..|+.++.|+.|+|++|+++|.+|..|+++++|+.|||++|+++|.+|..+..+++|++||+++|
T Consensus 635 ~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N 714 (768)
T 3rgz_A 635 MFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNN 714 (768)
T ss_dssp CEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSS
T ss_pred cEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCC
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCCccCccccccCcccccCCccCCCCccC
Q 048430 574 GLEGEIPSGGPFVNFTADSFKQNYALCGSSRLQVPPCKT 612 (973)
Q Consensus 574 ~l~~~~p~~~~~~~~~~~~~~~n~~~c~~~~~~~~~c~~ 612 (973)
+|+|.||..+++.+++..+|.||+++||.|+ ++|..
T Consensus 715 ~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l---~~C~~ 750 (768)
T 3rgz_A 715 NLSGPIPEMGQFETFPPAKFLNNPGLCGYPL---PRCDP 750 (768)
T ss_dssp EEEEECCSSSSGGGSCGGGGCSCTEEESTTS---CCCCS
T ss_pred cccccCCCchhhccCCHHHhcCCchhcCCCC---cCCCC
Confidence 9999999999999999999999999999884 36754
No 2
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=1.6e-63 Score=615.21 Aligned_cols=515 Identities=34% Similarity=0.460 Sum_probs=420.3
Q ss_pred CcEEEEecCCCCCCCcCCCCC-CCCCCCcEEEecCCCCCCCCCcc---ccc----------------------ccCCcEE
Q 048430 45 GRVAALSLPNLSLGGTLPPHV-GNLSFLVSLNISGNSFYDTLPNE---LWH----------------------MRRLKII 98 (973)
Q Consensus 45 ~~v~~l~l~~~~l~g~~~~~l-~~l~~L~~L~L~~n~~~~~~p~~---~~~----------------------l~~L~~L 98 (973)
.+.+.|+++++.+.|.+|..+ +.+++|++|+|++|++.+..|.. +++ +++|++|
T Consensus 126 ~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L 205 (768)
T 3rgz_A 126 SGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFL 205 (768)
T ss_dssp TTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBCTTCTTCCEE
T ss_pred CCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCCccCCcCChhhhhhccCCCCCEEECCCCcccccCCcccCCcCCEE
Confidence 468888888888888888765 77778888888877776666554 444 4555555
Q ss_pred EccCCCCCCCCCccccCCCCCccEEEeeCcccCCCCCccccCCCCCCeEEccCccccccCCccccCCCCCccEEEccccc
Q 048430 99 DFSSNSLSGSLPGDMCNSFTQLESFDVSSNKITGEFPSAIVNISSLKSIRLDNNSLSGSFPTDLCTRLPSLVQLRLLGNN 178 (973)
Q Consensus 99 ~Ls~n~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~L~~N~ 178 (973)
+|++|.+.+.+|. ++.+++|++|+|++|++++.+|..|+++++|++|+|++|+++|.+|.. .+++|++|+|++|+
T Consensus 206 ~Ls~n~l~~~~~~--l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~---~l~~L~~L~L~~n~ 280 (768)
T 3rgz_A 206 DVSSNNFSTGIPF--LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL---PLKSLQYLSLAENK 280 (768)
T ss_dssp ECCSSCCCSCCCB--CTTCCSCCEEECCSSCCCSCHHHHTTTCSSCCEEECCSSCCEESCCCC---CCTTCCEEECCSSE
T ss_pred ECcCCcCCCCCcc--cccCCCCCEEECcCCcCCCcccHHHhcCCCCCEEECCCCcccCccCcc---ccCCCCEEECcCCc
Confidence 5555555544443 455556666666666665555555666666666666666665555443 45566666666666
Q ss_pred ccccCCCCCCCccccCC-CCccEEEecCCcccCccccccccCCcceeEEeecccccccCCCC--CCccccceeeeccccc
Q 048430 179 ITGRIPNREIPNEIGNL-HNLKILDLGGNNIAGLIPSMIFNNSNMVAILLYGNHLSGHLPSS--IYLPNLENLFLWKNNL 255 (973)
Q Consensus 179 l~~~~~~~~~p~~l~~l-~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~--~~l~~L~~L~L~~N~l 255 (973)
++| .+|..+..+ ++|++|+|++|++++.+|..+..+++|+.|++++|.+++.+|.. ..+++|++|++++|++
T Consensus 281 l~~-----~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l 355 (768)
T 3rgz_A 281 FTG-----EIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEF 355 (768)
T ss_dssp EEE-----SCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEE
T ss_pred cCC-----ccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCcc
Confidence 654 345566554 88888888888888888888888888888888888888777743 3578888888888888
Q ss_pred cccCcchhcccC-cccEEEeccccccccCCCcccc--cccceEEEccCCcCCCCCCCcchhhhhhhccCCcCcEEEccCC
Q 048430 256 SGIIPDSICNAS-EATILELSSNLFSGLVPNTFGN--CRQLQILSLGDNQLTTGSSAQGQIFYSSLAKCRYLRVLVLDTN 332 (973)
Q Consensus 256 ~~~~~~~l~~l~-~L~~L~L~~N~i~~~~~~~~~~--l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~L~~L~L~~N 332 (973)
++.+|..+..++ +|++|++++|++++.+|..+.. +++|++|++++|++++ ..+..+.++++|+.|++++|
T Consensus 356 ~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-------~~p~~l~~l~~L~~L~Ls~N 428 (768)
T 3rgz_A 356 SGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTG-------KIPPTLSNCSELVSLHLSFN 428 (768)
T ss_dssp EECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEE-------ECCGGGGGCTTCCEEECCSS
T ss_pred CccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCcccc-------ccCHHHhcCCCCCEEECcCC
Confidence 888888888887 8888888888888777777766 7788888888888874 23456889999999999999
Q ss_pred CCCCCCCCcccccccccceeecccCCccccCCCCCCCCCcccEEEeecCccccccCcccCCCCCCCEEEccCCcCCCCCc
Q 048430 333 PLKGVIPNSIGNLSTSLENFYAGSSQLSGGIPVGFGNLSNLLVLSLVNNELAGAIPTVLGKLQKLQGLDLNSNKLKGFIP 412 (973)
Q Consensus 333 ~l~~~~p~~~~~l~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~ 412 (973)
++++.+|..+..+ ..|+.|++.+|.+++.+|..+..+++|++|++++|++++.+|..+..+++|++|+|++|++++.+|
T Consensus 429 ~l~~~~p~~l~~l-~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p 507 (768)
T 3rgz_A 429 YLSGTIPSSLGSL-SKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIP 507 (768)
T ss_dssp EEESCCCGGGGGC-TTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCC
T ss_pred cccCcccHHHhcC-CCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCC
Confidence 9999999998887 579999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhccCcCCeeecCCccccCcCcccccCcCCCCeeeccCCCCCCCCcccc-----------------------------
Q 048430 413 TDLCKLEKLNTLLSNNNALQGQIPTCLANLTSLRHLDFRSNSLNSTIPSTF----------------------------- 463 (973)
Q Consensus 413 ~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~----------------------------- 463 (973)
.+++.+++|+.|++++|++++.+|..+.++++|+.|++++|+++|.+|..+
T Consensus 508 ~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 587 (768)
T 3rgz_A 508 KWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKEC 587 (768)
T ss_dssp GGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTC
T ss_pred hHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhccccccccccccccccccc
Confidence 999999999999999999999999999999999999999999988777644
Q ss_pred -----------------------------------------cccccccEEEecCCcccCCcCcCccCCCCCCeEEccCCc
Q 048430 464 -----------------------------------------WSLKYILAVDFSLNSLSGSLPLNIGNLEALGGLNLTGNQ 502 (973)
Q Consensus 464 -----------------------------------------~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 502 (973)
..+++|+.||+++|+++|.+|.+++++++|+.|+|++|+
T Consensus 588 ~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~ 667 (768)
T 3rgz_A 588 HGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHND 667 (768)
T ss_dssp CSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSC
T ss_pred cccccccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCc
Confidence 335678999999999999999999999999999999999
Q ss_pred CcccCCcccccCCcCCEEEcccCccccCCCCCcccccccccccccccccCCCCCccccccccccccccCCCc-cccc
Q 048430 503 LSGYIPSSIGNLKNLDWLALARNAFQGPIPQSFGSLISLQSLDLSGNNISGEIPKSLEKLSRLVDFNVSFNG-LEGE 578 (973)
Q Consensus 503 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~ls~N~-l~~~ 578 (973)
++|.+|..|+.+++|+.|||++|+++|.+|..|+.+++|++|||++|+++|.+|.. ..+..+....+.+|+ |+|.
T Consensus 668 l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~-~~~~~~~~~~~~gN~~Lcg~ 743 (768)
T 3rgz_A 668 ISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEM-GQFETFPPAKFLNNPGLCGY 743 (768)
T ss_dssp CCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSS-SSGGGSCGGGGCSCTEEEST
T ss_pred cCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCc-hhhccCCHHHhcCCchhcCC
Confidence 99999999999999999999999999999999999999999999999999999965 456667777788885 7774
No 3
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=3e-59 Score=572.16 Aligned_cols=564 Identities=23% Similarity=0.234 Sum_probs=474.3
Q ss_pred ceEEEEEeeCC---------CCcEEEEecCCCCCCCcCCCCCCCCCCCcEEEecCCCCCCCCCcccccccCCcEEEccCC
Q 048430 33 CNWVGVTCSIR---------HGRVAALSLPNLSLGGTLPPHVGNLSFLVSLNISGNSFYDTLPNELWHMRRLKIIDFSSN 103 (973)
Q Consensus 33 c~w~gv~C~~~---------~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n 103 (973)
|.++-|.|+.. ..+++.|+++++.+++..+..++++++|++|+|++|.+.+..|..++++++|++|+|++|
T Consensus 4 ~~~~~~~cs~~~L~~ip~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n 83 (680)
T 1ziw_A 4 VSHEVADCSHLKLTQVPDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHN 83 (680)
T ss_dssp CBSSEEECCSSCCSSCCSCSCTTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSS
T ss_pred eECCeeECCCCCccccccccCCCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCC
Confidence 45556777542 358999999999999877778999999999999999999999999999999999999999
Q ss_pred CCCCCCCccccCCCCCccEEEeeCcccCCCCCccccCCCCCCeEEccCccccccCCccccCCCCCccEEEcccccccccC
Q 048430 104 SLSGSLPGDMCNSFTQLESFDVSSNKITGEFPSAIVNISSLKSIRLDNNSLSGSFPTDLCTRLPSLVQLRLLGNNITGRI 183 (973)
Q Consensus 104 ~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~ 183 (973)
.++ .+|...|..+++|++|+|++|++++..|..|+++++|++|+|++|.+++ ++...+..+++|++|+|++|++++..
T Consensus 84 ~l~-~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~ 161 (680)
T 1ziw_A 84 ELS-QLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSS-TKLGTQVQLENLQELLLSNNKIQALK 161 (680)
T ss_dssp CCC-CCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSC-CCCCSSSCCTTCCEEECCSSCCCCBC
T ss_pred ccC-ccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccc-cCchhhcccccCCEEEccCCcccccC
Confidence 998 7888878999999999999999998777899999999999999999994 45555678999999999999997532
Q ss_pred CCCCCCccc--cCCCCccEEEecCCcccCccccccccC---------------------------CcceeEEeecccccc
Q 048430 184 PNREIPNEI--GNLHNLKILDLGGNNIAGLIPSMIFNN---------------------------SNMVAILLYGNHLSG 234 (973)
Q Consensus 184 ~~~~~p~~l--~~l~~L~~L~L~~N~l~~~~~~~~~~~---------------------------~~L~~L~l~~n~l~~ 234 (973)
+..+ ..+++|++|++++|++++..|..+..+ ++|+.|++++|.+++
T Consensus 162 -----~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~ 236 (680)
T 1ziw_A 162 -----SEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLST 236 (680)
T ss_dssp -----HHHHGGGTTCEESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCE
T ss_pred -----HHHhhccccccccEEECCCCcccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccc
Confidence 3334 356899999999999999888877665 456677777777777
Q ss_pred cCCCCC-Cc--cccceeeeccccccccCcchhcccCcccEEEeccccccccCCCcccccccceEEEccCCcCCCCCC--C
Q 048430 235 HLPSSI-YL--PNLENLFLWKNNLSGIIPDSICNASEATILELSSNLFSGLVPNTFGNCRQLQILSLGDNQLTTGSS--A 309 (973)
Q Consensus 235 ~~~~~~-~l--~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~--~ 309 (973)
..|..+ .+ ++|++|+|++|++++..|..|+.+++|++|++++|++.+..|..|.++++|+.|++++|....... .
T Consensus 237 ~~~~~~~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~ 316 (680)
T 1ziw_A 237 TSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLAS 316 (680)
T ss_dssp ECTTTTGGGGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------
T ss_pred cChhHhhccCcCCCCEEECCCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhccccccc
Confidence 766554 34 348888888888888888888888888888888888888888888888888888888775442110 0
Q ss_pred cchhhhhhhccCCcCcEEEccCCCCCCCCCCcccccccccceeecccCCcccc--CCCCCCCC--CcccEEEeecCcccc
Q 048430 310 QGQIFYSSLAKCRYLRVLVLDTNPLKGVIPNSIGNLSTSLENFYAGSSQLSGG--IPVGFGNL--SNLLVLSLVNNELAG 385 (973)
Q Consensus 310 ~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~l~~l~l~~n~l~~~--~p~~~~~l--~~L~~L~Ls~n~l~~ 385 (973)
.+.+....+..+++|+.|++++|.+.+..|..+..+ ..|+.+++++|.+... .+..|..+ ++|+.|++++|++++
T Consensus 317 lp~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l-~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~ 395 (680)
T 1ziw_A 317 LPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGL-INLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISK 395 (680)
T ss_dssp CCEECTTTTTTCTTCCEEECCSCCBCCCCTTTTTTC-TTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCE
T ss_pred ccccChhhcccCCCCCEEECCCCccCCCChhHhccc-cCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCe
Confidence 011112257788999999999999998888777765 5789999998875432 22334433 589999999999998
Q ss_pred ccCcccCCCCCCCEEEccCCcCCCCCc-hhhhccCcCCeeecCCccccCcCcccccCcCCCCeeeccCCCCC--CCCccc
Q 048430 386 AIPTVLGKLQKLQGLDLNSNKLKGFIP-TDLCKLEKLNTLLSNNNALQGQIPTCLANLTSLRHLDFRSNSLN--STIPST 462 (973)
Q Consensus 386 ~~p~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~--~~~p~~ 462 (973)
..|..|..+++|++|+|++|++.+.+| ..+.++++|++|++++|++.+..+..|..+++|+.|++++|.+. +..|..
T Consensus 396 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~ 475 (680)
T 1ziw_A 396 IESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSP 475 (680)
T ss_dssp ECTTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCT
T ss_pred EChhhhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcc
Confidence 889999999999999999999987665 68999999999999999999999999999999999999999986 578999
Q ss_pred ccccccccEEEecCCcccCCcCcCccCCCCCCeEEccCCcCcccCC--------cccccCCcCCEEEcccCccccCCCCC
Q 048430 463 FWSLKYILAVDFSLNSLSGSLPLNIGNLEALGGLNLTGNQLSGYIP--------SSIGNLKNLDWLALARNAFQGPIPQS 534 (973)
Q Consensus 463 ~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p--------~~~~~l~~L~~L~Ls~N~l~~~~p~~ 534 (973)
|..+++|+.|++++|++++..+..|.++++|+.|+|++|++++..+ ..|+++++|+.|+|++|+++...+..
T Consensus 476 ~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~ 555 (680)
T 1ziw_A 476 FQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEV 555 (680)
T ss_dssp TTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTT
T ss_pred cccCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHH
Confidence 9999999999999999998888889999999999999999986422 24789999999999999999555567
Q ss_pred cccccccccccccccccCCCCCccccccccccccccCCCcccccCCCC-C-CCCccCccccccCcccccCCc
Q 048430 535 FGSLISLQSLDLSGNNISGEIPKSLEKLSRLVDFNVSFNGLEGEIPSG-G-PFVNFTADSFKQNYALCGSSR 604 (973)
Q Consensus 535 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~-~-~~~~~~~~~~~~n~~~c~~~~ 604 (973)
|.++++|+.|+|++|+|++..+..|..+++|+.|++++|++++.+|.. + .+.++....+.+|++.|+|..
T Consensus 556 ~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~~ 627 (680)
T 1ziw_A 556 FKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCES 627 (680)
T ss_dssp TTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCCC
T ss_pred cccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCcc
Confidence 999999999999999999887788899999999999999999877753 1 356677778899999999874
No 4
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=2e-57 Score=548.42 Aligned_cols=508 Identities=21% Similarity=0.225 Sum_probs=371.5
Q ss_pred CCCCCCCcCCCCCCCCCCCcEEEecCCCCCCCCCcccccccCCcEEEccCCCCCCCCCccccCCCCCccEEEeeCcccCC
Q 048430 53 PNLSLGGTLPPHVGNLSFLVSLNISGNSFYDTLPNELWHMRRLKIIDFSSNSLSGSLPGDMCNSFTQLESFDVSSNKITG 132 (973)
Q Consensus 53 ~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~ 132 (973)
++.+++ .+|..+.. .+++|+|++|++.+..|..|+++++|++|+|++|++.+ +++..|.++++|++|+|++|++++
T Consensus 20 ~~~~l~-~iP~~l~~--~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~-~~~~~~~~l~~L~~L~Ls~n~l~~ 95 (606)
T 3t6q_A 20 ENLGLN-EIPGTLPN--STECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYW-IHEDTFQSQHRLDTLVLTANPLIF 95 (606)
T ss_dssp TTSCCS-SCCTTSCT--TCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCE-ECTTTTTTCTTCCEEECTTCCCSE
T ss_pred CCCCcc-cCcCCCCC--cCcEEEccCCccCcCChhHhccCccceEEECCCCccce-eChhhccCccccCeeeCCCCcccc
Confidence 333443 44444432 45666666666666556666666666666666666663 333344566666666666666666
Q ss_pred CCCccccCCCCCCeEEccCccccccCCccccCCCCCccEEEcccccccccCCCCCCCccccCCCCccEEEecCCcccCcc
Q 048430 133 EFPSAIVNISSLKSIRLDNNSLSGSFPTDLCTRLPSLVQLRLLGNNITGRIPNREIPNEIGNLHNLKILDLGGNNIAGLI 212 (973)
Q Consensus 133 ~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~ 212 (973)
..|.+|+++++|++|+|++|+++ .++...+..+++|++|+|++|++++. .+|. +..+++|++|+|++|++++..
T Consensus 96 ~~~~~~~~l~~L~~L~L~~n~i~-~l~~~~~~~l~~L~~L~L~~n~l~~~----~~~~-~~~l~~L~~L~L~~n~l~~~~ 169 (606)
T 3t6q_A 96 MAETALSGPKALKHLFFIQTGIS-SIDFIPLHNQKTLESLYLGSNHISSI----KLPK-GFPTEKLKVLDFQNNAIHYLS 169 (606)
T ss_dssp ECTTTTSSCTTCCEEECTTSCCS-CGGGSCCTTCTTCCEEECCSSCCCCC----CCCT-TCCCTTCCEEECCSSCCCEEC
T ss_pred cChhhhcccccccEeeccccCcc-cCCcchhccCCcccEEECCCCccccc----Cccc-ccCCcccCEEEcccCcccccC
Confidence 66666666666666666666666 44434455666666666666666532 1122 333666666666666666666
Q ss_pred ccccccCCcce--eEEeecccccccCCCCCCccccceeeeccccc--------------------------cccCcchhc
Q 048430 213 PSMIFNNSNMV--AILLYGNHLSGHLPSSIYLPNLENLFLWKNNL--------------------------SGIIPDSIC 264 (973)
Q Consensus 213 ~~~~~~~~~L~--~L~l~~n~l~~~~~~~~~l~~L~~L~L~~N~l--------------------------~~~~~~~l~ 264 (973)
|..+..+++|+ .|++++|.+++..|..+...+|++|++++|.. ..+.+..+.
T Consensus 170 ~~~~~~l~~L~~l~L~l~~n~l~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~ 249 (606)
T 3t6q_A 170 KEDMSSLQQATNLSLNLNGNDIAGIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFE 249 (606)
T ss_dssp HHHHHTTTTCCSEEEECTTCCCCEECTTTTTTCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGG
T ss_pred hhhhhhhcccceeEEecCCCccCccChhHhhhccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhc
Confidence 66666666666 66666666666666555556666666665531 112223333
Q ss_pred ccC--cccEEEeccccccccCCCcccccccceEEEccCCcCCCCCCCcchhhhhhhccCCcCcEEEccCCCCCCCCCCcc
Q 048430 265 NAS--EATILELSSNLFSGLVPNTFGNCRQLQILSLGDNQLTTGSSAQGQIFYSSLAKCRYLRVLVLDTNPLKGVIPNSI 342 (973)
Q Consensus 265 ~l~--~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~ 342 (973)
.+. +|+.|++++|.++++.+..|+.+++|++|++++|+++.++. .+..+++|++|++++|++.+..|..+
T Consensus 250 ~l~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~lp~--------~l~~l~~L~~L~l~~n~l~~~~~~~~ 321 (606)
T 3t6q_A 250 GLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLSELPS--------GLVGLSTLKKLVLSANKFENLCQISA 321 (606)
T ss_dssp GGGGSEEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCSCCCS--------SCCSCTTCCEEECTTCCCSBGGGGCG
T ss_pred hhhcCceeEEEeecCccCccCHHHhccccCCCEEeccCCccCCCCh--------hhcccccCCEEECccCCcCcCchhhh
Confidence 333 68888888888888888888888888888888888876443 46778888888888888887777777
Q ss_pred cccccccceeecccCCccccCCCC-CCCCCcccEEEeecCcccccc--CcccCCCCCCCEEEccCCcCCCCCchhhhccC
Q 048430 343 GNLSTSLENFYAGSSQLSGGIPVG-FGNLSNLLVLSLVNNELAGAI--PTVLGKLQKLQGLDLNSNKLKGFIPTDLCKLE 419 (973)
Q Consensus 343 ~~l~~~l~~l~l~~n~l~~~~p~~-~~~l~~L~~L~Ls~n~l~~~~--p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 419 (973)
..+ +.|+.+++++|.+.+.+|.. +..+++|++|++++|.+++.. +..+..+++|++|++++|++.+..|..+..++
T Consensus 322 ~~l-~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 400 (606)
T 3t6q_A 322 SNF-PSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECP 400 (606)
T ss_dssp GGC-TTCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCT
T ss_pred hcc-CcCCEEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCc
Confidence 666 56888888888888766654 888888888888888888665 77888888888888888888877788888888
Q ss_pred cCCeeecCCccccCcCccc-ccCcCCCCeeeccCCCCCCCCcccccccccccEEEecCCcccCC---cCcCccCCCCCCe
Q 048430 420 KLNTLLSNNNALQGQIPTC-LANLTSLRHLDFRSNSLNSTIPSTFWSLKYILAVDFSLNSLSGS---LPLNIGNLEALGG 495 (973)
Q Consensus 420 ~L~~L~l~~N~l~~~~~~~-~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~---~p~~~~~l~~L~~ 495 (973)
+|+.|++++|.+.+..+.. +.++++|++|++++|.+.+..|..+..+++|+.|++++|++++. .+..+..+++|+.
T Consensus 401 ~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~ 480 (606)
T 3t6q_A 401 QLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEI 480 (606)
T ss_dssp TCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCE
T ss_pred cCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccE
Confidence 8888888888888776544 78888888888888888888888888888888888888888762 2356788888888
Q ss_pred EEccCCcCcccCCcccccCCcCCEEEcccCccccCCCCCcccccccccccccccccCCCCCccccccccccccccCCCcc
Q 048430 496 LNLTGNQLSGYIPSSIGNLKNLDWLALARNAFQGPIPQSFGSLISLQSLDLSGNNISGEIPKSLEKLSRLVDFNVSFNGL 575 (973)
Q Consensus 496 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l 575 (973)
|+|++|++++..|..|+.+++|+.|+|++|++++.+|..|..+++| .|+|++|++++.+|..+..+++|+.+++++|++
T Consensus 481 L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~ 559 (606)
T 3t6q_A 481 LVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPL 559 (606)
T ss_dssp EECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCE
T ss_pred EECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCc
Confidence 8888888888778888888888888888888888888888888888 888888888888888888888888888888888
Q ss_pred cccCC
Q 048430 576 EGEIP 580 (973)
Q Consensus 576 ~~~~p 580 (973)
.+..+
T Consensus 560 ~c~c~ 564 (606)
T 3t6q_A 560 DCTCS 564 (606)
T ss_dssp ECSGG
T ss_pred cccCC
Confidence 87665
No 5
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=4.2e-59 Score=562.37 Aligned_cols=498 Identities=21% Similarity=0.313 Sum_probs=310.9
Q ss_pred ChHHHHhhhccCCCcccCCCCCCC--------CCCCCCCcceE---EEEEeeCCCCcEEEEecCCCCCCCcCCCCCCCCC
Q 048430 1 ALVQLKARISLDPHNFFANNWNLS--------PTNTSASVCNW---VGVTCSIRHGRVAALSLPNLSLGGTLPPHVGNLS 69 (973)
Q Consensus 1 al~~~k~~~~~~~~~~~~~~w~~~--------~~~~~~~~c~w---~gv~C~~~~~~v~~l~l~~~~l~g~~~~~l~~l~ 69 (973)
||++||+++..+. |... .|..+++||.| .||+|+.. +||++|+|+++++.|.+|++++.|+
T Consensus 34 aL~~~~~~~~~~~-------w~~~~~~~~~~~~W~~~~~~c~w~~~~GV~C~~~-~~V~~L~L~~~~l~g~lp~~l~~L~ 105 (636)
T 4eco_A 34 ALKEIWDALNGKN-------WSQQGFGTQPGANWNFNKELDMWGAQPGVSLNSN-GRVTGLSLEGFGASGRVPDAIGQLT 105 (636)
T ss_dssp HHHHHHHHTTGGG-------CCCCC------CCCCCSSCGGGTTCCTTEEECTT-CCEEEEECTTSCCEEEECGGGGGCT
T ss_pred HHHHHHHHcCCCC-------cccCCcCCccCCCCCCCCCcccccCCCCeEEcCC-CCEEEEEecCcccCCcCChHHhcCc
Confidence 7999999985433 5422 25567999999 99999865 8999999999999999999999999
Q ss_pred CCcEEEecCCCC------CC------CCCcccccccCCcEEEccCCCCCCCCCccccCCCCCccEEEeeCcccCCCCCcc
Q 048430 70 FLVSLNISGNSF------YD------TLPNELWHMRRLKIIDFSSNSLSGSLPGDMCNSFTQLESFDVSSNKITGEFPSA 137 (973)
Q Consensus 70 ~L~~L~L~~n~~------~~------~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~ 137 (973)
+|++|+|++|.+ .| .+|... +..|+ +++++|.+.+.+|..+...+..+..+++....+..
T Consensus 106 ~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~----- 177 (636)
T 4eco_A 106 ELEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKK----- 177 (636)
T ss_dssp TCCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCC-----
T ss_pred cceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchhhHHHHHHHHhhcCcccccccc-----
Confidence 999999999976 34 566655 67777 88898888887776554323333333333222110
Q ss_pred ccCCCCCCeEEcc--CccccccCCccccCCCCCccEEEccccccccc-CCCC-----------CCCcccc--CCCCccEE
Q 048430 138 IVNISSLKSIRLD--NNSLSGSFPTDLCTRLPSLVQLRLLGNNITGR-IPNR-----------EIPNEIG--NLHNLKIL 201 (973)
Q Consensus 138 ~~~l~~L~~L~L~--~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~-~~~~-----------~~p~~l~--~l~~L~~L 201 (973)
.....++.+.+. +|+++| ||..+ +++++|++|+|++|+++|. ++.. .+|..++ ++++|++|
T Consensus 178 -~~~~~l~~l~l~~~~n~l~~-ip~~l-~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L 254 (636)
T 4eco_A 178 -SSRITLKDTQIGQLSNNITF-VSKAV-MRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDV 254 (636)
T ss_dssp -CCCCCCCTTTTTCCSCEEEE-ECGGG-GGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEE
T ss_pred -ccccchhhhhhccccCCCcc-CCHHH-hcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEE
Confidence 011112222222 344443 44432 3444444444444444431 0000 0445555 55555555
Q ss_pred EecCCcccCccccccccCCcceeEEeeccc-ccc-cCCCCC-C------ccccceeeeccccccccCcc--hhcccCccc
Q 048430 202 DLGGNNIAGLIPSMIFNNSNMVAILLYGNH-LSG-HLPSSI-Y------LPNLENLFLWKNNLSGIIPD--SICNASEAT 270 (973)
Q Consensus 202 ~L~~N~l~~~~~~~~~~~~~L~~L~l~~n~-l~~-~~~~~~-~------l~~L~~L~L~~N~l~~~~~~--~l~~l~~L~ 270 (973)
+|++|++.+.+|..+.++++|+.|++++|+ +++ .+|... . +++|++|+|++|+++ .+|. .++.+++|+
T Consensus 255 ~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~ 333 (636)
T 4eco_A 255 EVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLG 333 (636)
T ss_dssp EEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCC
T ss_pred EecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCC
Confidence 555555555555555555555555555554 444 333222 1 378888888888888 6777 788888888
Q ss_pred EEEeccccccccCCCcccccccceEEEccCCcCCCCCCCcchhhhhhhccCCc-CcEEEccCCCCCCCCCCccccccccc
Q 048430 271 ILELSSNLFSGLVPNTFGNCRQLQILSLGDNQLTTGSSAQGQIFYSSLAKCRY-LRVLVLDTNPLKGVIPNSIGNLSTSL 349 (973)
Q Consensus 271 ~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~-L~~L~L~~N~l~~~~p~~~~~l~~~l 349 (973)
+|++++|++++.+| .|+.+++|++|++++|+++.++ ..+..+++ |+.|++++|+++ .+|..
T Consensus 334 ~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~~lp--------~~l~~l~~~L~~L~Ls~N~l~-~lp~~-------- 395 (636)
T 4eco_A 334 MLECLYNQLEGKLP-AFGSEIKLASLNLAYNQITEIP--------ANFCGFTEQVENLSFAHNKLK-YIPNI-------- 395 (636)
T ss_dssp EEECCSCCCEEECC-CCEEEEEESEEECCSSEEEECC--------TTSEEECTTCCEEECCSSCCS-SCCSC--------
T ss_pred EEeCcCCcCccchh-hhCCCCCCCEEECCCCcccccc--------HhhhhhcccCcEEEccCCcCc-ccchh--------
Confidence 88888888887777 7888888888888888876432 33556666 666776666666 33333
Q ss_pred ceeecccCCccccCCCCCCC--CCcccEEEeecCccccccCcccC-------CCCCCCEEEccCCcCCCCCchhhhccCc
Q 048430 350 ENFYAGSSQLSGGIPVGFGN--LSNLLVLSLVNNELAGAIPTVLG-------KLQKLQGLDLNSNKLKGFIPTDLCKLEK 420 (973)
Q Consensus 350 ~~l~l~~n~l~~~~p~~~~~--l~~L~~L~Ls~n~l~~~~p~~~~-------~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 420 (973)
+.. +++|++|++++|.+++..|..|. .+++|++|+|++|+++...+..+..+++
T Consensus 396 -----------------~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~ 458 (636)
T 4eco_A 396 -----------------FDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSP 458 (636)
T ss_dssp -----------------CCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCC
T ss_pred -----------------hhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCC
Confidence 333 34677888888888777777776 6667777777777777433334445677
Q ss_pred CCeeecCCccccCcCcc-cccCcC-------CCCeeeccCCCCCCCCccccc--ccccccEEEecCCcccCCcCcCccCC
Q 048430 421 LNTLLSNNNALQGQIPT-CLANLT-------SLRHLDFRSNSLNSTIPSTFW--SLKYILAVDFSLNSLSGSLPLNIGNL 490 (973)
Q Consensus 421 L~~L~l~~N~l~~~~~~-~~~~l~-------~L~~L~L~~N~l~~~~p~~~~--~l~~L~~L~ls~N~l~~~~p~~~~~l 490 (973)
|+.|++++|+++ .+|. .+.... +|++|+|++|+++ .+|..+. .+++|+.|++++|++++ +|..+..+
T Consensus 459 L~~L~Ls~N~l~-~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l 535 (636)
T 4eco_A 459 LSSINLMGNMLT-EIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNS 535 (636)
T ss_dssp CSEEECCSSCCS-BCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGC
T ss_pred CCEEECCCCCCC-CcCHHHhccccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcC
Confidence 777777777766 3333 222221 4555555555554 3444443 44444444444444443 44444444
Q ss_pred CCCCeEEccCCcCcccCCcccccCCcCCEEEcccCccccCCCCCcccccccccccccccccCCCCCcccccccccccccc
Q 048430 491 EALGGLNLTGNQLSGYIPSSIGNLKNLDWLALARNAFQGPIPQSFGSLISLQSLDLSGNNISGEIPKSLEKLSRLVDFNV 570 (973)
Q Consensus 491 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~l 570 (973)
++|+.|+|++|+ ++++|++.+.+|..|+.+++|++|+|++|+| +.+|..+. ++|+.||+
T Consensus 536 ~~L~~L~Ls~N~------------------~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~~~--~~L~~L~L 594 (636)
T 4eco_A 536 STLKGFGIRNQR------------------DAQGNRTLREWPEGITLCPSLTQLQIGSNDI-RKVNEKIT--PNISVLDI 594 (636)
T ss_dssp SSCCEEECCSCB------------------CTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--TTCCEEEC
T ss_pred CCCCEEECCCCc------------------ccccCcccccChHHHhcCCCCCEEECCCCcC-CccCHhHh--CcCCEEEC
Confidence 444444443322 2256777777777777777888888888877 46776655 67788888
Q ss_pred CCCcccc
Q 048430 571 SFNGLEG 577 (973)
Q Consensus 571 s~N~l~~ 577 (973)
++|++..
T Consensus 595 s~N~l~~ 601 (636)
T 4eco_A 595 KDNPNIS 601 (636)
T ss_dssp CSCTTCE
T ss_pred cCCCCcc
Confidence 8887664
No 6
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=6.4e-56 Score=542.62 Aligned_cols=523 Identities=20% Similarity=0.233 Sum_probs=459.2
Q ss_pred CcEEEEecCCCCCCCcCCCCCCCCCCCcEEEecCCCCCCCCCcccccccCCcEEEccCCCCCCCCCccccCCCCCccEEE
Q 048430 45 GRVAALSLPNLSLGGTLPPHVGNLSFLVSLNISGNSFYDTLPNELWHMRRLKIIDFSSNSLSGSLPGDMCNSFTQLESFD 124 (973)
Q Consensus 45 ~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~~l~~L~~L~ 124 (973)
.+++.|+++++.+++..|..++++++|++|+|++|++.+..+..|+++++|++|+|++|++. .+|+..|+.+++|++|+
T Consensus 49 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~ 127 (680)
T 1ziw_A 49 SQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQ-KIKNNPFVKQKNLITLD 127 (680)
T ss_dssp TTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCC-CCCSCTTTTCTTCCEEE
T ss_pred CcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEECCCCccC-ccChhHccccCCCCEEE
Confidence 57999999999999988989999999999999999997655557999999999999999998 67766778999999999
Q ss_pred eeCcccCCCCCccccCCCCCCeEEccCccccccCCccccC--CCCCccEEEcccccccccCCCCCCCccccCC-------
Q 048430 125 VSSNKITGEFPSAIVNISSLKSIRLDNNSLSGSFPTDLCT--RLPSLVQLRLLGNNITGRIPNREIPNEIGNL------- 195 (973)
Q Consensus 125 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~--~l~~L~~L~L~~N~l~~~~~~~~~p~~l~~l------- 195 (973)
|++|.+++..|..++++++|++|++++|.+++ ++...+. .+++|++|++++|++++.. |..+..+
T Consensus 128 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~~~~~~L~~L~L~~n~l~~~~-----~~~~~~l~~L~~L~ 201 (680)
T 1ziw_A 128 LSHNGLSSTKLGTQVQLENLQELLLSNNKIQA-LKSEELDIFANSSLKKLELSSNQIKEFS-----PGCFHAIGRLFGLF 201 (680)
T ss_dssp CCSSCCSCCCCCSSSCCTTCCEEECCSSCCCC-BCHHHHGGGTTCEESEEECTTCCCCCBC-----TTGGGGSSEECEEE
T ss_pred CCCCcccccCchhhcccccCCEEEccCCcccc-cCHHHhhccccccccEEECCCCcccccC-----hhhhhhhhhhhhhh
Confidence 99999999999999999999999999999984 4444332 5689999999999998643 3334332
Q ss_pred --------------------CCccEEEecCCcccCccccccccCCc--ceeEEeecccccccCCCCC-Cccccceeeecc
Q 048430 196 --------------------HNLKILDLGGNNIAGLIPSMIFNNSN--MVAILLYGNHLSGHLPSSI-YLPNLENLFLWK 252 (973)
Q Consensus 196 --------------------~~L~~L~L~~N~l~~~~~~~~~~~~~--L~~L~l~~n~l~~~~~~~~-~l~~L~~L~L~~ 252 (973)
++|+.|++++|++++..|..+.+++. |+.|++++|++++..+..+ .+++|++|++++
T Consensus 202 l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~ 281 (680)
T 1ziw_A 202 LNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEY 281 (680)
T ss_dssp CTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCS
T ss_pred ccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCccCcccccCcccccEeeCCC
Confidence 67889999999999999999988865 9999999999998887655 699999999999
Q ss_pred ccccccCcchhcccCcccEEEeccccccc---------cCCCcccccccceEEEccCCcCCCCCCCcchhhhhhhccCCc
Q 048430 253 NNLSGIIPDSICNASEATILELSSNLFSG---------LVPNTFGNCRQLQILSLGDNQLTTGSSAQGQIFYSSLAKCRY 323 (973)
Q Consensus 253 N~l~~~~~~~l~~l~~L~~L~L~~N~i~~---------~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~ 323 (973)
|++.+..|..|..+++|+.|++++|...+ +....|..+++|++|++++|++++.+ +..+..+++
T Consensus 282 n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~~-------~~~~~~l~~ 354 (680)
T 1ziw_A 282 NNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIK-------SNMFTGLIN 354 (680)
T ss_dssp CCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCCCC-------TTTTTTCTT
T ss_pred CccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccCCCC-------hhHhccccC
Confidence 99999999999999999999999886553 22237889999999999999998754 345788999
Q ss_pred CcEEEccCCCCCCC--CCCcccccc-cccceeecccCCccccCCCCCCCCCcccEEEeecCccccccC-cccCCCCCCCE
Q 048430 324 LRVLVLDTNPLKGV--IPNSIGNLS-TSLENFYAGSSQLSGGIPVGFGNLSNLLVLSLVNNELAGAIP-TVLGKLQKLQG 399 (973)
Q Consensus 324 L~~L~L~~N~l~~~--~p~~~~~l~-~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p-~~~~~l~~L~~ 399 (973)
|+.|++++|.+... .+..+..+. ..++.+++++|++++..|..|..+++|++|++++|.+.+.+| ..|..+++|++
T Consensus 355 L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~ 434 (680)
T 1ziw_A 355 LKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFE 434 (680)
T ss_dssp CCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCE
T ss_pred CcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccCcccccCcccccE
Confidence 99999999986433 223333332 579999999999999999999999999999999999987665 78999999999
Q ss_pred EEccCCcCCCCCchhhhccCcCCeeecCCcccc--CcCcccccCcCCCCeeeccCCCCCCCCcccccccccccEEEecCC
Q 048430 400 LDLNSNKLKGFIPTDLCKLEKLNTLLSNNNALQ--GQIPTCLANLTSLRHLDFRSNSLNSTIPSTFWSLKYILAVDFSLN 477 (973)
Q Consensus 400 L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~--~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N 477 (973)
|++++|++.+..+..|..+++|+.|++++|.+. +..|..+.++++|+.|++++|++++..+..|..+++|+.|++++|
T Consensus 435 L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N 514 (680)
T 1ziw_A 435 IYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHN 514 (680)
T ss_dssp EECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred EecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCC
Confidence 999999999888999999999999999999987 578899999999999999999999988889999999999999999
Q ss_pred cccCCcC--------cCccCCCCCCeEEccCCcCcccCCcccccCCcCCEEEcccCccccCCCCCccccccccccccccc
Q 048430 478 SLSGSLP--------LNIGNLEALGGLNLTGNQLSGYIPSSIGNLKNLDWLALARNAFQGPIPQSFGSLISLQSLDLSGN 549 (973)
Q Consensus 478 ~l~~~~p--------~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 549 (973)
++++..+ ..+.++++|+.|+|++|+++...+..|.++++|+.|+|++|++++..+..|..+++|+.|+|++|
T Consensus 515 ~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N 594 (680)
T 1ziw_A 515 NLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKN 594 (680)
T ss_dssp CCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTS
T ss_pred CccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCC
Confidence 9986422 23789999999999999999555557999999999999999999877888999999999999999
Q ss_pred ccCCCCCcccc-ccccccccccCCCcccccCCC
Q 048430 550 NISGEIPKSLE-KLSRLVDFNVSFNGLEGEIPS 581 (973)
Q Consensus 550 ~l~~~~p~~~~-~l~~L~~l~ls~N~l~~~~p~ 581 (973)
+|++..|..+. .+++|+.+++++|++.+..+.
T Consensus 595 ~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~~ 627 (680)
T 1ziw_A 595 LITSVEKKVFGPAFRNLTELDMRFNPFDCTCES 627 (680)
T ss_dssp CCCBCCHHHHHHHHTTCSEEECTTCCCCBCCCC
T ss_pred cCCccChhHhcccccccCEEEccCCCcccCCcc
Confidence 99998888888 899999999999999998774
No 7
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=3e-56 Score=538.08 Aligned_cols=529 Identities=20% Similarity=0.198 Sum_probs=341.5
Q ss_pred EEecCCCCCCCcCCCCCCCCCCCcEEEecCCCCCCCCCcccccccCCcEEEccCCCCCCCCCccccCCCCCccEEEeeCc
Q 048430 49 ALSLPNLSLGGTLPPHVGNLSFLVSLNISGNSFYDTLPNELWHMRRLKIIDFSSNSLSGSLPGDMCNSFTQLESFDVSSN 128 (973)
Q Consensus 49 ~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~~l~~L~~L~Ls~N 128 (973)
.++.++++++ .+|..+. ++|++|+|++|++.+..|..|.++++|++|+|++|.++ .+++..|.++++|++|+|++|
T Consensus 15 ~~~c~~~~l~-~ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~i~~~~~~~l~~L~~L~Ls~n 90 (606)
T 3vq2_A 15 TYQCMDQKLS-KVPDDIP--SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIE-TIEDKAWHGLHHLSNLILTGN 90 (606)
T ss_dssp EEECTTSCCS-SCCTTSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCC-EECTTTTTTCTTCCEEECTTC
T ss_pred ceEccCCCcc-cCCCCCC--CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCccc-ccCHHHhhchhhcCEeECCCC
Confidence 3566667776 6776554 78888899988888777778888888999999988888 455555678888999999988
Q ss_pred ccCCCCCccccCCCCCCeEEccCccccccCCccccCCCCCccEEEcccccccccCCCCCCCccccCCCCccEEEecCCcc
Q 048430 129 KITGEFPSAIVNISSLKSIRLDNNSLSGSFPTDLCTRLPSLVQLRLLGNNITGRIPNREIPNEIGNLHNLKILDLGGNNI 208 (973)
Q Consensus 129 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~p~~l~~l~~L~~L~L~~N~l 208 (973)
++++..|.+|+++++|++|+|++|+++ .++...+..+++|++|+|++|++++. .+|..|+++++|++|+|++|++
T Consensus 91 ~l~~~~p~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~----~lp~~~~~l~~L~~L~Ls~n~l 165 (606)
T 3vq2_A 91 PIQSFSPGSFSGLTSLENLVAVETKLA-SLESFPIGQLITLKKLNVAHNFIHSC----KLPAYFSNLTNLVHVDLSYNYI 165 (606)
T ss_dssp CCCCCCTTSSTTCTTCCEEECTTSCCC-CSSSSCCTTCTTCCEEECCSSCCCCC----CCCGGGGTCTTCCEEECCSSCC
T ss_pred cccccChhhcCCcccCCEEEccCCccc-cccccccCCCCCCCEEeCCCCcccce----echHhHhhcCCCCEEEccCCcc
Confidence 888777888888888999999998888 56655578888899999998888642 4678888888999999999988
Q ss_pred cCccccccccCCcce----eEEeecccccccCCCCCCccccceeeecccccc-ccCcchhcccCcccEEEeccccccc--
Q 048430 209 AGLIPSMIFNNSNMV----AILLYGNHLSGHLPSSIYLPNLENLFLWKNNLS-GIIPDSICNASEATILELSSNLFSG-- 281 (973)
Q Consensus 209 ~~~~~~~~~~~~~L~----~L~l~~n~l~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~l~~l~~L~~L~L~~N~i~~-- 281 (973)
++..|..+..+++|+ .|++++|.+++..+..+...+|++|++++|.+. +..|..+.+++.|+.+++..+.+..
T Consensus 166 ~~~~~~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~ 245 (606)
T 3vq2_A 166 QTITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDER 245 (606)
T ss_dssp CEECTTTTHHHHHCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSC
T ss_pred eecChhhhhhhhccccccceeeccCCCcceeCcccccCceeeeeeccCCccchhHHHHHhccccccccccccccccccCC
Confidence 888787777776665 788888888877777666668888999888886 4567778888888877775443321
Q ss_pred ----cCCCcccccc--cceEEEc-cCCcCCCCCCCcchhhhhhhccCCcCcEEEccCCCCCCCCCCcccccccccceeec
Q 048430 282 ----LVPNTFGNCR--QLQILSL-GDNQLTTGSSAQGQIFYSSLAKCRYLRVLVLDTNPLKGVIPNSIGNLSTSLENFYA 354 (973)
Q Consensus 282 ----~~~~~~~~l~--~L~~L~L-~~N~l~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~l~~l~l 354 (973)
..+..+.++. .++.+++ ..|.+.+. .+ .+..+++|+.|++++|.+.. +| .+..+ ..++.+++
T Consensus 246 ~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~-------~~-~~~~l~~L~~L~l~~~~~~~-l~-~l~~~-~~L~~L~l 314 (606)
T 3vq2_A 246 NLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDD-------IV-KFHCLANVSAMSLAGVSIKY-LE-DVPKH-FKWQSLSI 314 (606)
T ss_dssp CCSCCCGGGGTTGGGSEEEEEEECCCTTCCGG-------GG-SCGGGTTCSEEEEESCCCCC-CC-CCCTT-CCCSEEEE
T ss_pred cccccChHHhhhhhhccHhheecccccccccc-------cc-ccccCCCCCEEEecCccchh-hh-hcccc-ccCCEEEc
Confidence 1111222221 2333444 33333321 11 14455555555555555542 23 33322 34555555
Q ss_pred ccCCccccCCCCCCCCCcccEEEeecCccccccCcccCCCCCCCEEEccCCcCCCC--CchhhhccCcCCeeecCCcccc
Q 048430 355 GSSQLSGGIPVGFGNLSNLLVLSLVNNELAGAIPTVLGKLQKLQGLDLNSNKLKGF--IPTDLCKLEKLNTLLSNNNALQ 432 (973)
Q Consensus 355 ~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~--~~~~~~~l~~L~~L~l~~N~l~ 432 (973)
.+|.+ +.+| .+ .+++|++|++++|...+.. .+..+++|++|++++|++++. .|..+..+++|+.|++++|.++
T Consensus 315 ~~n~l-~~lp-~~-~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~ 389 (606)
T 3vq2_A 315 IRCQL-KQFP-TL-DLPFLKSLTLTMNKGSISF--KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAI 389 (606)
T ss_dssp ESCCC-SSCC-CC-CCSSCCEEEEESCSSCEEC--CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEE
T ss_pred ccccC-cccc-cC-CCCccceeeccCCcCccch--hhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCccc
Confidence 55555 4455 33 5666666666666443222 445566666666666666544 2555666666666666666655
Q ss_pred CcCcccccCcCCCCeeeccCCCCCCCCc-ccccccccccEEEecCCcccCCcCcCccCCCCCCeEEccCCcCcc-cCCcc
Q 048430 433 GQIPTCLANLTSLRHLDFRSNSLNSTIP-STFWSLKYILAVDFSLNSLSGSLPLNIGNLEALGGLNLTGNQLSG-YIPSS 510 (973)
Q Consensus 433 ~~~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~ 510 (973)
+ +|..+..+++|+.|++++|++.+..| ..|..+++|+.|++++|++++..|..++++++|+.|++++|++++ .+|..
T Consensus 390 ~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~ 468 (606)
T 3vq2_A 390 I-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNV 468 (606)
T ss_dssp E-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSC
T ss_pred c-chhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHh
Confidence 3 33555666666666666666655555 455666666666666666665566666666666666666666664 25556
Q ss_pred cccCCcCCEEEcccCccccCCCCCcccccccccccccccccCCCCCccccccccccccccCCCcccccCCCC-CCCC-cc
Q 048430 511 IGNLKNLDWLALARNAFQGPIPQSFGSLISLQSLDLSGNNISGEIPKSLEKLSRLVDFNVSFNGLEGEIPSG-GPFV-NF 588 (973)
Q Consensus 511 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~-~~~~-~~ 588 (973)
|+.+++|+.|+|++|++++.+|..|+.+++|++|+|++|++++.+|..|..+++|+.|++++|+++. +|.. ..+. ++
T Consensus 469 ~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~-~p~~~~~l~~~L 547 (606)
T 3vq2_A 469 FANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIET-SKGILQHFPKSL 547 (606)
T ss_dssp CTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCCC-EESCGGGSCTTC
T ss_pred hccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCcc-cCHhHhhhcccC
Confidence 6666666666666666666556666666666666666666666556666666666666666666653 3322 2222 23
Q ss_pred CccccccCcccccCCc
Q 048430 589 TADSFKQNYALCGSSR 604 (973)
Q Consensus 589 ~~~~~~~n~~~c~~~~ 604 (973)
....+.+|++.|+++.
T Consensus 548 ~~l~l~~N~~~c~c~~ 563 (606)
T 3vq2_A 548 AFFNLTNNSVACICEH 563 (606)
T ss_dssp CEEECCSCCCCCSSTT
T ss_pred cEEEccCCCcccCCcc
Confidence 4445556666665543
No 8
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=2.1e-55 Score=530.79 Aligned_cols=505 Identities=19% Similarity=0.180 Sum_probs=444.2
Q ss_pred EEEEEeeCC---------CCcEEEEecCCCCCCCcCCCCCCCCCCCcEEEecCCCCCCCCCcccccccCCcEEEccCCCC
Q 048430 35 WVGVTCSIR---------HGRVAALSLPNLSLGGTLPPHVGNLSFLVSLNISGNSFYDTLPNELWHMRRLKIIDFSSNSL 105 (973)
Q Consensus 35 w~gv~C~~~---------~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l 105 (973)
+.-|.|... +..++.|+++++.+++..|..++++++|++|+|++|++.+..|..|+++++|++|+|++|++
T Consensus 14 ~~~~~c~~~~l~~iP~~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l 93 (606)
T 3t6q_A 14 NKTYNCENLGLNEIPGTLPNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPL 93 (606)
T ss_dssp TTEEECTTSCCSSCCTTSCTTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred CceEECCCCCcccCcCCCCCcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcc
Confidence 345888652 35799999999999988888999999999999999999998899999999999999999999
Q ss_pred CCCCCccccCCCCCccEEEeeCcccCCCCCccccCCCCCCeEEccCccccccCCccccCCCCCccEEEcccccccccCCC
Q 048430 106 SGSLPGDMCNSFTQLESFDVSSNKITGEFPSAIVNISSLKSIRLDNNSLSGSFPTDLCTRLPSLVQLRLLGNNITGRIPN 185 (973)
Q Consensus 106 ~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~ 185 (973)
.+..| ..++.+++|++|+|++|++++..|..|+++++|++|+|++|+++ .++...+..+++|++|+|++|++++.
T Consensus 94 ~~~~~-~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~--- 168 (606)
T 3t6q_A 94 IFMAE-TALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHIS-SIKLPKGFPTEKLKVLDFQNNAIHYL--- 168 (606)
T ss_dssp SEECT-TTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCC-CCCCCTTCCCTTCCEEECCSSCCCEE---
T ss_pred cccCh-hhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCccc-ccCcccccCCcccCEEEcccCccccc---
Confidence 95444 45689999999999999999877889999999999999999999 44333333599999999999999853
Q ss_pred CCCCccccCCCCcc--EEEecCCcccCccccccccCCcceeEEeecccccc-------------------------cCCC
Q 048430 186 REIPNEIGNLHNLK--ILDLGGNNIAGLIPSMIFNNSNMVAILLYGNHLSG-------------------------HLPS 238 (973)
Q Consensus 186 ~~~p~~l~~l~~L~--~L~L~~N~l~~~~~~~~~~~~~L~~L~l~~n~l~~-------------------------~~~~ 238 (973)
.|..++.+++|+ .|++++|++++..|..+. ..+|+.|++++|.... .++.
T Consensus 169 --~~~~~~~l~~L~~l~L~l~~n~l~~~~~~~~~-~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~ 245 (606)
T 3t6q_A 169 --SKEDMSSLQQATNLSLNLNGNDIAGIEPGAFD-SAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISP 245 (606)
T ss_dssp --CHHHHHTTTTCCSEEEECTTCCCCEECTTTTT-TCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCG
T ss_pred --ChhhhhhhcccceeEEecCCCccCccChhHhh-hccccccccCCchhHHHHhhhccccchhheechhhccccccccCh
Confidence 356799999999 999999999987776654 4689999998875110 0000
Q ss_pred CC--Cc--cccceeeeccccccccCcchhcccCcccEEEeccccccccCCCcccccccceEEEccCCcCCCCCCCcchhh
Q 048430 239 SI--YL--PNLENLFLWKNNLSGIIPDSICNASEATILELSSNLFSGLVPNTFGNCRQLQILSLGDNQLTTGSSAQGQIF 314 (973)
Q Consensus 239 ~~--~l--~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~ 314 (973)
.. .+ .+|++|++++|+++++.+..|+.+++|++|++++|.++. +|..+.++++|++|++++|+++.. .
T Consensus 246 ~~~~~l~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-lp~~l~~l~~L~~L~l~~n~l~~~-------~ 317 (606)
T 3t6q_A 246 AVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLSE-LPSGLVGLSTLKKLVLSANKFENL-------C 317 (606)
T ss_dssp GGGGGGGGSEEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCSC-CCSSCCSCTTCCEEECTTCCCSBG-------G
T ss_pred hHhchhhcCceeEEEeecCccCccCHHHhccccCCCEEeccCCccCC-CChhhcccccCCEEECccCCcCcC-------c
Confidence 00 11 279999999999999988899999999999999999994 567799999999999999999863 3
Q ss_pred hhhhccCCcCcEEEccCCCCCCCCCCcccccccccceeecccCCccccC--CCCCCCCCcccEEEeecCccccccCcccC
Q 048430 315 YSSLAKCRYLRVLVLDTNPLKGVIPNSIGNLSTSLENFYAGSSQLSGGI--PVGFGNLSNLLVLSLVNNELAGAIPTVLG 392 (973)
Q Consensus 315 ~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~l~~l~l~~n~l~~~~--p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~ 392 (973)
+..+..+++|+.|++++|.+.+.+|.....-...|+.+++++|.+++.. |..+..+++|++|++++|++.+..|..|.
T Consensus 318 ~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 397 (606)
T 3t6q_A 318 QISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFK 397 (606)
T ss_dssp GGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTT
T ss_pred hhhhhccCcCCEEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhc
Confidence 4568899999999999999998887764444578999999999999876 88899999999999999999989999999
Q ss_pred CCCCCCEEEccCCcCCCCCch-hhhccCcCCeeecCCccccCcCcccccCcCCCCeeeccCCCCCCC---Cccccccccc
Q 048430 393 KLQKLQGLDLNSNKLKGFIPT-DLCKLEKLNTLLSNNNALQGQIPTCLANLTSLRHLDFRSNSLNST---IPSTFWSLKY 468 (973)
Q Consensus 393 ~l~~L~~L~Ls~N~l~~~~~~-~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~---~p~~~~~l~~ 468 (973)
.+++|++|++++|++.+..+. .+..+++|+.|++++|.+.+..|..+..+++|++|++++|++++. .+..+..+++
T Consensus 398 ~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~ 477 (606)
T 3t6q_A 398 ECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGR 477 (606)
T ss_dssp TCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTT
T ss_pred CCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCC
Confidence 999999999999999977665 489999999999999999999999999999999999999999862 3467999999
Q ss_pred ccEEEecCCcccCCcCcCccCCCCCCeEEccCCcCcccCCcccccCCcCCEEEcccCccccCCCCCcccccccccccccc
Q 048430 469 ILAVDFSLNSLSGSLPLNIGNLEALGGLNLTGNQLSGYIPSSIGNLKNLDWLALARNAFQGPIPQSFGSLISLQSLDLSG 548 (973)
Q Consensus 469 L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 548 (973)
|+.|++++|++++..|..|+++++|+.|+|++|++++..|..+..++.| .|+|++|++++.+|..|..+++|+.|+|++
T Consensus 478 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~ 556 (606)
T 3t6q_A 478 LEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQ 556 (606)
T ss_dssp CCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTT
T ss_pred ccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCC
Confidence 9999999999998889999999999999999999999999999999999 999999999999999999999999999999
Q ss_pred cccCCCCC
Q 048430 549 NNISGEIP 556 (973)
Q Consensus 549 N~l~~~~p 556 (973)
|++++..+
T Consensus 557 N~~~c~c~ 564 (606)
T 3t6q_A 557 NPLDCTCS 564 (606)
T ss_dssp CCEECSGG
T ss_pred CCccccCC
Confidence 99997655
No 9
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=7.5e-55 Score=543.32 Aligned_cols=523 Identities=21% Similarity=0.204 Sum_probs=255.4
Q ss_pred ecCCCCCCCcCCCCCCCCCCCcEEEecCCCCCCCCCcccccccCCcEEEccCCCCCCCCCccccCCCCCccEEEeeCccc
Q 048430 51 SLPNLSLGGTLPPHVGNLSFLVSLNISGNSFYDTLPNELWHMRRLKIIDFSSNSLSGSLPGDMCNSFTQLESFDVSSNKI 130 (973)
Q Consensus 51 ~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~~l~~L~~L~Ls~N~l 130 (973)
|.++++++ .+|. ..++|++|+|++|.+.+..|..|.++++|++|||++|.+.+.++++.|.++++|++|+|++|.+
T Consensus 10 dcs~~~L~-~vP~---lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l 85 (844)
T 3j0a_A 10 FYRFCNLT-QVPQ---VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKI 85 (844)
T ss_dssp EESCCCSS-CCCS---SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCC
T ss_pred EccCCCCC-CCCC---CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcC
Confidence 34444554 3443 3355666666666665555666666666666666666554455555556666666666666666
Q ss_pred CCCCCccccCCCCCCeEEccCccccccCCc-cccCCCCCccEEEcccccccccCCCCCCCccccCCCCccEEEecCCccc
Q 048430 131 TGEFPSAIVNISSLKSIRLDNNSLSGSFPT-DLCTRLPSLVQLRLLGNNITGRIPNREIPNEIGNLHNLKILDLGGNNIA 209 (973)
Q Consensus 131 ~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~p~~l~~l~~L~~L~L~~N~l~ 209 (973)
++..|.+|+++++|++|+|++|.+++.+|. ..+..+++|++|+|++|.+++.. .+..|+++++|++|+|++|.++
T Consensus 86 ~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~----~~~~~~~L~~L~~L~Ls~N~i~ 161 (844)
T 3j0a_A 86 YFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLY----LHPSFGKLNSLKSIDFSSNQIF 161 (844)
T ss_dssp CEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCC----CCGGGGTCSSCCEEEEESSCCC
T ss_pred cccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccc----cchhHhhCCCCCEEECCCCcCC
Confidence 655566666666666666666666544443 23455666666666666665321 2345566666666666666666
Q ss_pred CccccccccC--CcceeEEeecccccccCCCCC-Ccc------ccceeeeccccccccCcchhccc---CcccEEEecc-
Q 048430 210 GLIPSMIFNN--SNMVAILLYGNHLSGHLPSSI-YLP------NLENLFLWKNNLSGIIPDSICNA---SEATILELSS- 276 (973)
Q Consensus 210 ~~~~~~~~~~--~~L~~L~l~~n~l~~~~~~~~-~l~------~L~~L~L~~N~l~~~~~~~l~~l---~~L~~L~L~~- 276 (973)
+..+..+..+ ++|+.|++++|.+.+..|... .++ +|++|++++|.+++..+..+... ++++.|.+++
T Consensus 162 ~~~~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~ 241 (844)
T 3j0a_A 162 LVCEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHH 241 (844)
T ss_dssp CCCSGGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSS
T ss_pred eeCHHHcccccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccc
Confidence 5555555555 566666666666655444322 122 26666666666655555444432 3344444431
Q ss_pred --------ccccccCCCccccc--ccceEEEccCCcCCCCCCCcchhhhhhhccCCcCcEEEccCCCCCCCCCCcccccc
Q 048430 277 --------NLFSGLVPNTFGNC--RQLQILSLGDNQLTTGSSAQGQIFYSSLAKCRYLRVLVLDTNPLKGVIPNSIGNLS 346 (973)
Q Consensus 277 --------N~i~~~~~~~~~~l--~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 346 (973)
|.+.+..+..|.++ ++|+.|++++|.+.... +..+..+++|+.|+|++|++.+..|..+..+
T Consensus 242 ~~~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~-------~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l- 313 (844)
T 3j0a_A 242 IMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLN-------SRVFETLKDLKVLNLAYNKINKIADEAFYGL- 313 (844)
T ss_dssp CCBCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEEC-------SCCSSSCCCCCEEEEESCCCCEECTTTTTTC-
T ss_pred cccccccccccCCCChhhhhccccCCccEEECCCCcccccC-------hhhhhcCCCCCEEECCCCcCCCCChHHhcCC-
Confidence 22222222333332 34444444444444321 1223444444444444444444444444333
Q ss_pred cccceeecccCCccccCCCCCCCCCcccEEEeecCccccccCcccCCCCCCCEEEccCCcCCCCCchhhhccCcCCeeec
Q 048430 347 TSLENFYAGSSQLSGGIPVGFGNLSNLLVLSLVNNELAGAIPTVLGKLQKLQGLDLNSNKLKGFIPTDLCKLEKLNTLLS 426 (973)
Q Consensus 347 ~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l 426 (973)
..|+.|++++|.+++..|..|..+++|+.|++++|.+.+..+..|..+++|++|+|++|.+++. + .+++|+.|++
T Consensus 314 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i-~----~~~~L~~L~l 388 (844)
T 3j0a_A 314 DNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTI-H----FIPSIPDIFL 388 (844)
T ss_dssp SSCCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCC-S----SCCSCSEEEE
T ss_pred CCCCEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCcc-c----CCCCcchhcc
Confidence 2444444444444444444455555555555555555444444445555555555555554421 1 1444455555
Q ss_pred CCccccCcCcccccCcCCCCeeeccCCCCCCCC-cccccccccccEEEecCCcccCCcCc-CccCCCCCCeEEccCCcCc
Q 048430 427 NNNALQGQIPTCLANLTSLRHLDFRSNSLNSTI-PSTFWSLKYILAVDFSLNSLSGSLPL-NIGNLEALGGLNLTGNQLS 504 (973)
Q Consensus 427 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~ 504 (973)
++|+++ .+|.. ..+++.|++++|++++.. +..+..+++|+.|++++|++++..+. .+..+++|+.|+|++|.++
T Consensus 389 ~~N~l~-~l~~~---~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~ 464 (844)
T 3j0a_A 389 SGNKLV-TLPKI---NLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQ 464 (844)
T ss_dssp ESCCCC-CCCCC---CTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCS
T ss_pred CCCCcc-ccccc---ccccceeecccCccccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCccc
Confidence 555544 22221 234445555555544321 11233444555555555555432221 2333444555555555543
Q ss_pred -----ccCCcccccCCcCCEEEcccCccccCCCCCcccccccccccccccccCCCCCccccccccccccccCCCcccccC
Q 048430 505 -----GYIPSSIGNLKNLDWLALARNAFQGPIPQSFGSLISLQSLDLSGNNISGEIPKSLEKLSRLVDFNVSFNGLEGEI 579 (973)
Q Consensus 505 -----~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~ 579 (973)
+..+..|.++++|+.|+|++|+|++.+|..|..+++|+.|+|++|+|++..|..+. ++|+.|||++|+|++.+
T Consensus 465 ~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~ 542 (844)
T 3j0a_A 465 LAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPN 542 (844)
T ss_dssp SSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCC
T ss_pred cccccccchhhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCC
Confidence 22233344445555555555555544444455555555555555555544443333 44555555555555444
Q ss_pred CCCCCCCccCccccccCcccccC
Q 048430 580 PSGGPFVNFTADSFKQNYALCGS 602 (973)
Q Consensus 580 p~~~~~~~~~~~~~~~n~~~c~~ 602 (973)
|. .+.++....+.+|++.|+|
T Consensus 543 ~~--~~~~L~~l~l~~Np~~C~c 563 (844)
T 3j0a_A 543 PD--VFVSLSVLDITHNKFICEC 563 (844)
T ss_dssp SC--CCSSCCEEEEEEECCCCSS
T ss_pred hh--HhCCcCEEEecCCCccccc
Confidence 43 2233344444445544444
No 10
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=4.3e-56 Score=543.23 Aligned_cols=481 Identities=20% Similarity=0.234 Sum_probs=320.1
Q ss_pred ChHHHHhhhccCCCcccCCCCCCCCCCCCCCc--ceE------------EEEEeeCCCCcEEEEecCCCCCCCcCCCCCC
Q 048430 1 ALVQLKARISLDPHNFFANNWNLSPTNTSASV--CNW------------VGVTCSIRHGRVAALSLPNLSLGGTLPPHVG 66 (973)
Q Consensus 1 al~~~k~~~~~~~~~~~~~~w~~~~~~~~~~~--c~w------------~gv~C~~~~~~v~~l~l~~~~l~g~~~~~l~ 66 (973)
||++||+++. || +|+.+.+|+..+| |+| .||+|+. .+||++|+|+++++.|.+|++++
T Consensus 273 ALl~~k~~l~-~~------~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~-~~~V~~L~Ls~~~L~G~ip~~l~ 344 (876)
T 4ecn_A 273 ALKAIWEALD-GK------NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDN-NGRVTGLSLAGFGAKGRVPDAIG 344 (876)
T ss_dssp HHHHHHHHTT-GG------GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECT-TSCEEEEECTTTCCEEEECGGGG
T ss_pred HHHHHHHHcC-CC------CCCcCCCcccccCCccccccccccccccCcCceEecC-CCCEEEEECccCCCCCcCchHHh
Confidence 7999999994 66 4987765555565 999 9999987 68999999999999999999999
Q ss_pred CCCCCcEEEe-cCCCCCCCCCccc---------------------------------------------------ccccC
Q 048430 67 NLSFLVSLNI-SGNSFYDTLPNEL---------------------------------------------------WHMRR 94 (973)
Q Consensus 67 ~l~~L~~L~L-~~n~~~~~~p~~~---------------------------------------------------~~l~~ 94 (973)
+|++|++|+| ++|.+.|..|-.. .....
T Consensus 345 ~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i~~~~~l~ 424 (876)
T 4ecn_A 345 QLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKKDSRIS 424 (876)
T ss_dssp GCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCCCCCCCCC
T ss_pred ccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCccccccccccccc
Confidence 9999999999 8898776644221 11122
Q ss_pred CcEEEcc--CCCCCCCCCccccCCCCCccEEEeeCcccCC-----------------CCCcccc--CCCCCCeEEccCcc
Q 048430 95 LKIIDFS--SNSLSGSLPGDMCNSFTQLESFDVSSNKITG-----------------EFPSAIV--NISSLKSIRLDNNS 153 (973)
Q Consensus 95 L~~L~Ls--~n~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~-----------------~~p~~~~--~l~~L~~L~L~~N~ 153 (973)
++.+.++ +|+++| +|..+ +++++|++|+|++|+|++ .+|+.++ ++++|++|+|++|.
T Consensus 425 l~~l~l~~~~N~L~~-IP~~l-~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~ 502 (876)
T 4ecn_A 425 LKDTQIGNLTNRITF-ISKAI-QRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCP 502 (876)
T ss_dssp CCTTTTTCCSCEEEE-ECGGG-GGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCT
T ss_pred hhhceeccccCcccc-hhHHH-hcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCC
Confidence 3333333 378886 88764 789999999999999998 3899988 99999999999999
Q ss_pred ccccCCccccCCCCCccEEEccccc-ccc-cCCCCCCCccccCCC-------CccEEEecCCcccCcccc--ccccCCcc
Q 048430 154 LSGSFPTDLCTRLPSLVQLRLLGNN-ITG-RIPNREIPNEIGNLH-------NLKILDLGGNNIAGLIPS--MIFNNSNM 222 (973)
Q Consensus 154 l~~~ip~~~~~~l~~L~~L~L~~N~-l~~-~~~~~~~p~~l~~l~-------~L~~L~L~~N~l~~~~~~--~~~~~~~L 222 (973)
+.|.+|..+ ..+++|++|+|++|+ ++| . +|..+++++ +|++|+|++|+++ .+|. .+.++++|
T Consensus 503 l~~~iP~~l-~~L~~L~~L~Ls~N~~lsg~~-----iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L 575 (876)
T 4ecn_A 503 NMTQLPDFL-YDLPELQSLNIACNRGISAAQ-----LKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKL 575 (876)
T ss_dssp TCCSCCGGG-GGCSSCCEEECTTCTTSCHHH-----HHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTC
T ss_pred CCccChHHH-hCCCCCCEEECcCCCCccccc-----chHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCC
Confidence 999999554 689999999999998 876 3 355565555 9999999999999 7787 88886555
Q ss_pred eeEEeecccccccCCCCCCccccceeeeccccccccCcchhcccCc-ccEEEeccccccccCCCcccccccceEEEccCC
Q 048430 223 VAILLYGNHLSGHLPSSIYLPNLENLFLWKNNLSGIIPDSICNASE-ATILELSSNLFSGLVPNTFGNCRQLQILSLGDN 301 (973)
Q Consensus 223 ~~L~l~~n~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~-L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N 301 (973)
+.|++++|.++ .+|....+++|++|+|++|+++ .+|..+..+++ |+.|+|++|.++ .+|..+..+..
T Consensus 576 ~~L~Ls~N~l~-~lp~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~--------- 643 (876)
T 4ecn_A 576 GLLDCVHNKVR-HLEAFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSV--------- 643 (876)
T ss_dssp CEEECTTSCCC-BCCCCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCS---------
T ss_pred CEEECCCCCcc-cchhhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhcccc---------
Confidence 55555555555 4443334555555555555555 44444555554 555555555554 23333333322
Q ss_pred cCCCCCCCcchhhhhhhccCCcCcEEEccCCCCCCCCCCcccccccccceeecccCCccccCCCCCC--CCCcccEEEee
Q 048430 302 QLTTGSSAQGQIFYSSLAKCRYLRVLVLDTNPLKGVIPNSIGNLSTSLENFYAGSSQLSGGIPVGFG--NLSNLLVLSLV 379 (973)
Q Consensus 302 ~l~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~l~~l~l~~n~l~~~~p~~~~--~l~~L~~L~Ls 379 (973)
++|+.|++++|++.+.+|.. |..+. .+++|+.|+|+
T Consensus 644 --------------------~~L~~L~Ls~N~l~g~ip~l----------------------~~~l~~~~~~~L~~L~Ls 681 (876)
T 4ecn_A 644 --------------------YVMGSVDFSYNKIGSEGRNI----------------------SCSMDDYKGINASTVTLS 681 (876)
T ss_dssp --------------------SCEEEEECCSSCTTTTSSSC----------------------SSCTTTCCCCCEEEEECC
T ss_pred --------------------CCCCEEECcCCcCCCccccc----------------------hhhhccccCCCcCEEEcc
Confidence 22444444444444433321 11111 33467777888
Q ss_pred cCccccccCcccCCCCCCCEEEccCCcCCCCCchhhhcc--------CcCCeeecCCccccCcCccccc--CcCCCCeee
Q 048430 380 NNELAGAIPTVLGKLQKLQGLDLNSNKLKGFIPTDLCKL--------EKLNTLLSNNNALQGQIPTCLA--NLTSLRHLD 449 (973)
Q Consensus 380 ~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l--------~~L~~L~l~~N~l~~~~~~~~~--~l~~L~~L~ 449 (973)
+|.++...+..+..+++|+.|+|++|+++ .+|..+... ++|+.|+|++|+++ .+|..+. .+++|+.|+
T Consensus 682 ~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~ 759 (876)
T 4ecn_A 682 YNEIQKFPTELFATGSPISTIILSNNLMT-SIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMD 759 (876)
T ss_dssp SSCCCSCCHHHHHTTCCCSEEECCSCCCS-CCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEE
T ss_pred CCcCCccCHHHHccCCCCCEEECCCCcCC-ccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEE
Confidence 87777333334457777778888877777 455443322 24555555555555 3444443 455555555
Q ss_pred ccCCCCCCCCcccccccccccEEEecCCcccCCcCcCccCCCCCCeEEccCCcCcccCCcccccCCcCCEEEcccCcccc
Q 048430 450 FRSNSLNSTIPSTFWSLKYILAVDFSLNSLSGSLPLNIGNLEALGGLNLTGNQLSGYIPSSIGNLKNLDWLALARNAFQG 529 (973)
Q Consensus 450 L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 529 (973)
|++|++++ +|..+..+++|+.|++++|+ ++++|++.+.+|..|+.+++|+.|+|++|+| +
T Consensus 760 Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~------------------~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~ 819 (876)
T 4ecn_A 760 VSYNCFSS-FPTQPLNSSQLKAFGIRHQR------------------DAEGNRILRQWPTGITTCPSLIQLQIGSNDI-R 819 (876)
T ss_dssp CCSSCCSS-CCCGGGGCTTCCEEECCCCB------------------CTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-C
T ss_pred eCCCCCCc-cchhhhcCCCCCEEECCCCC------------------CcccccccccChHHHhcCCCCCEEECCCCCC-C
Confidence 55555544 34444455555555554443 3345777777777777777777777777777 4
Q ss_pred CCCCCcccccccccccccccccCCCCCccccccccccccccCCCccc
Q 048430 530 PIPQSFGSLISLQSLDLSGNNISGEIPKSLEKLSRLVDFNVSFNGLE 576 (973)
Q Consensus 530 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~ 576 (973)
.+|..+. ++|+.|||++|++....+..+.....+..+.|++|++.
T Consensus 820 ~Ip~~l~--~~L~~LdLs~N~l~~i~~~~~~~~~~~~~~~L~~n~~~ 864 (876)
T 4ecn_A 820 KVDEKLT--PQLYILDIADNPNISIDVTSVCPYIEAGMYVLLYDKTQ 864 (876)
T ss_dssp BCCSCCC--SSSCEEECCSCTTCEEECGGGHHHHHTTCCEEECCTTS
T ss_pred ccCHhhc--CCCCEEECCCCCCCccChHHccccccchheeecCCCcc
Confidence 7776655 47777777777777666666666666666666666543
No 11
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=9.7e-55 Score=542.34 Aligned_cols=519 Identities=19% Similarity=0.169 Sum_probs=447.3
Q ss_pred ceEEEEEeeCCCCcEEEEecCCCCCCCcCCCCCCCCCCCcEEEecCCCCCCCC-CcccccccCCcEEEccCCCCCCCCCc
Q 048430 33 CNWVGVTCSIRHGRVAALSLPNLSLGGTLPPHVGNLSFLVSLNISGNSFYDTL-PNELWHMRRLKIIDFSSNSLSGSLPG 111 (973)
Q Consensus 33 c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~-p~~~~~l~~L~~L~Ls~n~l~~~~p~ 111 (973)
|+|..|.+ .+.+++.|||++|.+++..|..++++++|++|+|++|.+.+.+ |..|+++++|++|+|++|.+.+..|
T Consensus 14 ~~L~~vP~--lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p- 90 (844)
T 3j0a_A 14 CNLTQVPQ--VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHP- 90 (844)
T ss_dssp CCSSCCCS--SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECT-
T ss_pred CCCCCCCC--CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCH-
Confidence 56777877 5678999999999999988999999999999999999776777 7889999999999999999995445
Q ss_pred cccCCCCCccEEEeeCcccCCCCCcc--ccCCCCCCeEEccCccccccCCccccCCCCCccEEEcccccccccCCCCCCC
Q 048430 112 DMCNSFTQLESFDVSSNKITGEFPSA--IVNISSLKSIRLDNNSLSGSFPTDLCTRLPSLVQLRLLGNNITGRIPNREIP 189 (973)
Q Consensus 112 ~~~~~l~~L~~L~Ls~N~l~~~~p~~--~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~p 189 (973)
+.|..+++|++|+|++|.+++.+|.. |+++++|++|+|++|.+++..+...|.++++|++|+|++|.+++ ..|
T Consensus 91 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~-----~~~ 165 (844)
T 3j0a_A 91 DAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFL-----VCE 165 (844)
T ss_dssp TSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCC-----CCS
T ss_pred hHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCe-----eCH
Confidence 55689999999999999999877765 99999999999999999966666678899999999999999985 346
Q ss_pred ccccCC--CCccEEEecCCcccCccccccccCCc------ceeEEeecccccccCCCCC----Cccccceeeecc-----
Q 048430 190 NEIGNL--HNLKILDLGGNNIAGLIPSMIFNNSN------MVAILLYGNHLSGHLPSSI----YLPNLENLFLWK----- 252 (973)
Q Consensus 190 ~~l~~l--~~L~~L~L~~N~l~~~~~~~~~~~~~------L~~L~l~~n~l~~~~~~~~----~l~~L~~L~L~~----- 252 (973)
..++.+ ++|+.|+|++|.+.+..|..+..+.+ |+.|++++|.+++..+... ...+++.|.+++
T Consensus 166 ~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~ 245 (844)
T 3j0a_A 166 HELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGA 245 (844)
T ss_dssp GGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBC
T ss_pred HHcccccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccc
Confidence 778877 89999999999999988887776665 9999999999988776544 246788888773
Q ss_pred ----ccccccCcchhccc--CcccEEEeccccccccCCCcccccccceEEEccCCcCCCCCCCcchhhhhhhccCCcCcE
Q 048430 253 ----NNLSGIIPDSICNA--SEATILELSSNLFSGLVPNTFGNCRQLQILSLGDNQLTTGSSAQGQIFYSSLAKCRYLRV 326 (973)
Q Consensus 253 ----N~l~~~~~~~l~~l--~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~L~~ 326 (973)
|.+.+..+..|..+ ++|+.|+|++|.+.+..+..|..+++|+.|+|++|+++... +..+..+++|+.
T Consensus 246 ~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~-------~~~~~~l~~L~~ 318 (844)
T 3j0a_A 246 GFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIA-------DEAFYGLDNLQV 318 (844)
T ss_dssp SSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEEC-------TTTTTTCSSCCE
T ss_pred cccccccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCC-------hHHhcCCCCCCE
Confidence 34444445556555 78999999999999999999999999999999999998643 346788999999
Q ss_pred EEccCCCCCCCCCCcccccccccceeecccCCccccCCCCCCCCCcccEEEeecCccccccCcccCCCCCCCEEEccCCc
Q 048430 327 LVLDTNPLKGVIPNSIGNLSTSLENFYAGSSQLSGGIPVGFGNLSNLLVLSLVNNELAGAIPTVLGKLQKLQGLDLNSNK 406 (973)
Q Consensus 327 L~L~~N~l~~~~p~~~~~l~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~ 406 (973)
|+|++|.+.+..|..+..+ ..|+.|++++|++++..+..|..+++|++|+|++|.+++. ..+++|+.|++++|+
T Consensus 319 L~Ls~N~l~~~~~~~~~~l-~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i-----~~~~~L~~L~l~~N~ 392 (844)
T 3j0a_A 319 LNLSYNLLGELYSSNFYGL-PKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTI-----HFIPSIPDIFLSGNK 392 (844)
T ss_dssp EEEESCCCSCCCSCSCSSC-TTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCC-----SSCCSCSEEEEESCC
T ss_pred EECCCCCCCccCHHHhcCC-CCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCcc-----cCCCCcchhccCCCC
Confidence 9999999998888888877 5799999999999988888999999999999999999843 238899999999999
Q ss_pred CCCCCchhhhccCcCCeeecCCccccCcCc-ccccCcCCCCeeeccCCCCCCCCcc-cccccccccEEEecCCccc----
Q 048430 407 LKGFIPTDLCKLEKLNTLLSNNNALQGQIP-TCLANLTSLRHLDFRSNSLNSTIPS-TFWSLKYILAVDFSLNSLS---- 480 (973)
Q Consensus 407 l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~ls~N~l~---- 480 (973)
++ .+|.. ..+++.|++++|++++... ..+.++++|+.|+|++|++++..+. .+..+++|+.|++++|.++
T Consensus 393 l~-~l~~~---~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~ 468 (844)
T 3j0a_A 393 LV-TLPKI---NLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWE 468 (844)
T ss_dssp CC-CCCCC---CTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCC
T ss_pred cc-ccccc---ccccceeecccCccccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccc
Confidence 99 45543 5679999999999997533 3456899999999999999875543 4667899999999999997
Q ss_pred -CCcCcCccCCCCCCeEEccCCcCcccCCcccccCCcCCEEEcccCccccCCCCCcccccccccccccccccCCCCCccc
Q 048430 481 -GSLPLNIGNLEALGGLNLTGNQLSGYIPSSIGNLKNLDWLALARNAFQGPIPQSFGSLISLQSLDLSGNNISGEIPKSL 559 (973)
Q Consensus 481 -~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 559 (973)
+..+..|.++++|+.|+|++|+|++..|..|..+++|+.|+|++|+|++..|..+. ++|+.|+|++|+|++.+|..|
T Consensus 469 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~~ 546 (844)
T 3j0a_A 469 TELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDVF 546 (844)
T ss_dssp SCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCCC
T ss_pred cccchhhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhHh
Confidence 44456789999999999999999998899999999999999999999987777776 899999999999999999876
Q ss_pred cccccccccccCCCcccccCCC
Q 048430 560 EKLSRLVDFNVSFNGLEGEIPS 581 (973)
Q Consensus 560 ~~l~~L~~l~ls~N~l~~~~p~ 581 (973)
. +|+.+++++|++.+.++-
T Consensus 547 ~---~L~~l~l~~Np~~C~c~~ 565 (844)
T 3j0a_A 547 V---SLSVLDITHNKFICECEL 565 (844)
T ss_dssp S---SCCEEEEEEECCCCSSSC
T ss_pred C---CcCEEEecCCCccccccc
Confidence 4 788999999999987764
No 12
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=3.3e-53 Score=511.54 Aligned_cols=505 Identities=21% Similarity=0.200 Sum_probs=430.5
Q ss_pred CcEEEecCCCCCCCCCcccccccCCcEEEccCCCCCCCCCccccCCCCCccEEEeeCcccCCCCCccccCCCCCCeEEcc
Q 048430 71 LVSLNISGNSFYDTLPNELWHMRRLKIIDFSSNSLSGSLPGDMCNSFTQLESFDVSSNKITGEFPSAIVNISSLKSIRLD 150 (973)
Q Consensus 71 L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 150 (973)
..+++.+++++ ..+|..+. ++|++|+|++|.++ .++...|.++++|++|+|++|++++..|.+|+++++|++|+|+
T Consensus 13 ~~~~~c~~~~l-~~ip~~~~--~~l~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls 88 (606)
T 3vq2_A 13 NITYQCMDQKL-SKVPDDIP--SSTKNIDLSFNPLK-ILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILT 88 (606)
T ss_dssp TTEEECTTSCC-SSCCTTSC--TTCCEEECTTSCCC-EECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred CCceEccCCCc-ccCCCCCC--CCcCEEECCCCCcC-EeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECC
Confidence 36799999999 57888765 89999999999998 5666667899999999999999998889999999999999999
Q ss_pred CccccccCCccccCCCCCccEEEcccccccccCCCCCCCccccCCCCccEEEecCCcccC-ccccccccCCcceeEEeec
Q 048430 151 NNSLSGSFPTDLCTRLPSLVQLRLLGNNITGRIPNREIPNEIGNLHNLKILDLGGNNIAG-LIPSMIFNNSNMVAILLYG 229 (973)
Q Consensus 151 ~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~p~~l~~l~~L~~L~L~~N~l~~-~~~~~~~~~~~L~~L~l~~ 229 (973)
+|+++ .++...|..+++|++|+|++|++++. .|..++++++|++|+|++|++++ .+|..+.++++|+.|++++
T Consensus 89 ~n~l~-~~~p~~~~~l~~L~~L~L~~n~l~~~-----~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~ 162 (606)
T 3vq2_A 89 GNPIQ-SFSPGSFSGLTSLENLVAVETKLASL-----ESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSY 162 (606)
T ss_dssp TCCCC-CCCTTSSTTCTTCCEEECTTSCCCCS-----SSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCS
T ss_pred CCccc-ccChhhcCCcccCCEEEccCCccccc-----cccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccC
Confidence 99999 55555668999999999999999743 23679999999999999999986 5699999999999999999
Q ss_pred ccccccCCCCC-Ccccc----ceeeeccccccccCcchhcccCcccEEEecccccc-ccCCCcccccccceEEEccCCcC
Q 048430 230 NHLSGHLPSSI-YLPNL----ENLFLWKNNLSGIIPDSICNASEATILELSSNLFS-GLVPNTFGNCRQLQILSLGDNQL 303 (973)
Q Consensus 230 n~l~~~~~~~~-~l~~L----~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~i~-~~~~~~~~~l~~L~~L~L~~N~l 303 (973)
|++++..+..+ .+.+| .+|++++|.++++.+..+... +|+.|++++|.++ +..|..+.++++|+.+++..+.+
T Consensus 163 n~l~~~~~~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~-~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~ 241 (606)
T 3vq2_A 163 NYIQTITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGI-KLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEF 241 (606)
T ss_dssp SCCCEECTTTTHHHHHCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECC
T ss_pred CcceecChhhhhhhhccccccceeeccCCCcceeCcccccCc-eeeeeeccCCccchhHHHHHhcccccccccccccccc
Confidence 99998877655 45555 489999999998777776655 8999999999987 56677889999999999876665
Q ss_pred CCCCCC--cchhhhhhhccCCcCcEEEc-cCCCCCCCCCCcccccccccceeecccCCccccCCCCCCCCCcccEEEeec
Q 048430 304 TTGSSA--QGQIFYSSLAKCRYLRVLVL-DTNPLKGVIPNSIGNLSTSLENFYAGSSQLSGGIPVGFGNLSNLLVLSLVN 380 (973)
Q Consensus 304 ~~~~~~--~~~~~~~~l~~l~~L~~L~L-~~N~l~~~~p~~~~~l~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~ 380 (973)
.....- .....+..+..+ .++.+++ ..|.+.+.+|. +. ....++.+.+.+|.+.. +| .+..+++|+.|++++
T Consensus 242 ~~~~~l~~~~~~~~~~l~~l-~l~~l~l~~~~~~~~~~~~-~~-~l~~L~~L~l~~~~~~~-l~-~l~~~~~L~~L~l~~ 316 (606)
T 3vq2_A 242 KDERNLEIFEPSIMEGLCDV-TIDEFRLTYTNDFSDDIVK-FH-CLANVSAMSLAGVSIKY-LE-DVPKHFKWQSLSIIR 316 (606)
T ss_dssp TTSCCCSCCCGGGGTTGGGS-EEEEEEECCCTTCCGGGGS-CG-GGTTCSEEEEESCCCCC-CC-CCCTTCCCSEEEEES
T ss_pred ccCCcccccChHHhhhhhhc-cHhheeccccccccccccc-cc-cCCCCCEEEecCccchh-hh-hccccccCCEEEccc
Confidence 432111 111122333333 5677777 78888888887 44 44789999999999964 56 899999999999999
Q ss_pred CccccccCcccCCCCCCCEEEccCCcCCCCCchhhhccCcCCeeecCCccccCc--CcccccCcCCCCeeeccCCCCCCC
Q 048430 381 NELAGAIPTVLGKLQKLQGLDLNSNKLKGFIPTDLCKLEKLNTLLSNNNALQGQ--IPTCLANLTSLRHLDFRSNSLNST 458 (973)
Q Consensus 381 n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~--~~~~~~~l~~L~~L~L~~N~l~~~ 458 (973)
|.+ +.+| .+ .+++|++|++++|+..+.. .+..+++|+.|++++|.+++. .+..+..+++|++|++++|.+++
T Consensus 317 n~l-~~lp-~~-~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~- 390 (606)
T 3vq2_A 317 CQL-KQFP-TL-DLPFLKSLTLTMNKGSISF--KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII- 390 (606)
T ss_dssp CCC-SSCC-CC-CCSSCCEEEEESCSSCEEC--CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-
T ss_pred ccC-cccc-cC-CCCccceeeccCCcCccch--hhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-
Confidence 999 4778 45 9999999999999766443 677999999999999999976 37889999999999999999985
Q ss_pred CcccccccccccEEEecCCcccCCcC-cCccCCCCCCeEEccCCcCcccCCcccccCCcCCEEEcccCcccc-CCCCCcc
Q 048430 459 IPSTFWSLKYILAVDFSLNSLSGSLP-LNIGNLEALGGLNLTGNQLSGYIPSSIGNLKNLDWLALARNAFQG-PIPQSFG 536 (973)
Q Consensus 459 ~p~~~~~l~~L~~L~ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~ 536 (973)
+|..|..+++|+.|++++|++++..| ..+..+++|+.|++++|++++..|..++.+++|+.|+|++|++++ .+|..|+
T Consensus 391 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 470 (606)
T 3vq2_A 391 MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFA 470 (606)
T ss_dssp ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCT
T ss_pred chhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhc
Confidence 66899999999999999999998877 689999999999999999999999999999999999999999998 4799999
Q ss_pred cccccccccccccccCCCCCccccccccccccccCCCcccccCCCC-CCCCccCccccccCc
Q 048430 537 SLISLQSLDLSGNNISGEIPKSLEKLSRLVDFNVSFNGLEGEIPSG-GPFVNFTADSFKQNY 597 (973)
Q Consensus 537 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~-~~~~~~~~~~~~~n~ 597 (973)
.+++|++|+|++|++++.+|..|..+++|+.|++++|++++.+|.. ..+.++....+.+|.
T Consensus 471 ~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~ 532 (606)
T 3vq2_A 471 NTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNR 532 (606)
T ss_dssp TCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSC
T ss_pred cCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCc
Confidence 9999999999999999999999999999999999999999987753 455666666677774
No 13
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=5.3e-51 Score=488.84 Aligned_cols=508 Identities=20% Similarity=0.230 Sum_probs=422.6
Q ss_pred EecCCCCCCCcCCCCCCCCCCCcEEEecCCCCCCCCCcccccccCCcEEEccCCCCCCCCCccccCCCCCccEEEeeCcc
Q 048430 50 LSLPNLSLGGTLPPHVGNLSFLVSLNISGNSFYDTLPNELWHMRRLKIIDFSSNSLSGSLPGDMCNSFTQLESFDVSSNK 129 (973)
Q Consensus 50 l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~~l~~L~~L~Ls~N~ 129 (973)
++.++.+++ ++|..+. +.+++|+|++|++.+..|..|.++++|++|||++|++. .++...|.++++|++|+|++|+
T Consensus 12 ~~c~~~~l~-~ip~~l~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~-~i~~~~~~~l~~L~~L~L~~n~ 87 (570)
T 2z63_A 12 YQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQ-TIEDGAYQSLSHLSTLILTGNP 87 (570)
T ss_dssp EECCSSCCS-SCCSSSC--SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCC-EECTTTTTTCTTCCEEECTTCC
T ss_pred EEeCCCCcc-ccCCCcc--ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCC-ccCcccccCchhCCEEeCcCCc
Confidence 334444555 5665443 57899999999998877888999999999999999998 5666777889999999999999
Q ss_pred cCCCCCccccCCCCCCeEEccCccccccCCccccCCCCCccEEEcccccccccCCCCCCCccccCCCCccEEEecCCccc
Q 048430 130 ITGEFPSAIVNISSLKSIRLDNNSLSGSFPTDLCTRLPSLVQLRLLGNNITGRIPNREIPNEIGNLHNLKILDLGGNNIA 209 (973)
Q Consensus 130 l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~p~~l~~l~~L~~L~L~~N~l~ 209 (973)
+++..|.+|+++++|++|++++|+++ .+|...+..+++|++|+|++|.+++. .+|..|+++++|++|++++|+++
T Consensus 88 l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~l~~L~~L~L~~n~l~~~----~lp~~~~~l~~L~~L~l~~n~l~ 162 (570)
T 2z63_A 88 IQSLALGAFSGLSSLQKLVAVETNLA-SLENFPIGHLKTLKELNVAHNLIQSF----KLPEYFSNLTNLEHLDLSSNKIQ 162 (570)
T ss_dssp CCEECTTTTTTCTTCCEEECTTSCCC-CSTTCSCTTCTTCCEEECCSSCCCCC----CCCGGGGGCTTCCEEECTTSCCC
T ss_pred CCccCHhhhcCccccccccccccccc-cCCCccccccccccEEecCCCcccee----cChhhhcccCCCCEEeCcCCccc
Confidence 99877789999999999999999998 67766678899999999999998742 46888999999999999999999
Q ss_pred CccccccccCCcc----eeEEeecccccccCCCCCCccccceeeeccccccc-cCcchhcccCcccEEEeccccc-----
Q 048430 210 GLIPSMIFNNSNM----VAILLYGNHLSGHLPSSIYLPNLENLFLWKNNLSG-IIPDSICNASEATILELSSNLF----- 279 (973)
Q Consensus 210 ~~~~~~~~~~~~L----~~L~l~~n~l~~~~~~~~~l~~L~~L~L~~N~l~~-~~~~~l~~l~~L~~L~L~~N~i----- 279 (973)
+..+..+..+++| +.+++++|.+++..+..+...+|++|++++|.... .++..+..+++++.+.+..+.+
T Consensus 163 ~~~~~~~~~l~~L~~~~~~L~l~~n~l~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~ 242 (570)
T 2z63_A 163 SIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGN 242 (570)
T ss_dssp EECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSS
T ss_pred eecHHHccchhccchhhhhcccCCCCceecCHHHhccCcceeEecccccccccchhhhhcCccccceeeeccccccCchh
Confidence 8888888888888 88999999999888877766689999999885432 3455667777777666654322
Q ss_pred -cccCCCccccccc--ceEEEccCC-cCCCCCCCcchhhhhhhccCCcCcEEEccCCCCCCCCCCcccccccccceeecc
Q 048430 280 -SGLVPNTFGNCRQ--LQILSLGDN-QLTTGSSAQGQIFYSSLAKCRYLRVLVLDTNPLKGVIPNSIGNLSTSLENFYAG 355 (973)
Q Consensus 280 -~~~~~~~~~~l~~--L~~L~L~~N-~l~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~l~~l~l~ 355 (973)
..+....|.++.+ ++.+++++| .+... .+..+..+++|+.|++++|.+. .+|..+..+ .++.+++.
T Consensus 243 l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~-------~~~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~--~L~~L~l~ 312 (570)
T 2z63_A 243 LEKFDKSALEGLCNLTIEEFRLAYLDYYLDD-------IIDLFNCLTNVSSFSLVSVTIE-RVKDFSYNF--GWQHLELV 312 (570)
T ss_dssp CEECCTTTTGGGGGSEEEEEEEEETTEEESC-------STTTTGGGTTCSEEEEESCEEC-SCCBCCSCC--CCSEEEEE
T ss_pred hhhcchhhhccccccchhhhhhhcchhhhhh-------chhhhcCcCcccEEEecCccch-hhhhhhccC--CccEEeec
Confidence 2333444555443 456666665 33321 2345677788888888888877 467666666 78888888
Q ss_pred cCCccccCCCCCCCCCcccEEEeecCccccccCcccCCCCCCCEEEccCCcCCCCC--chhhhccCcCCeeecCCccccC
Q 048430 356 SSQLSGGIPVGFGNLSNLLVLSLVNNELAGAIPTVLGKLQKLQGLDLNSNKLKGFI--PTDLCKLEKLNTLLSNNNALQG 433 (973)
Q Consensus 356 ~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~--~~~~~~l~~L~~L~l~~N~l~~ 433 (973)
+|.+. .+|. ..+++|+.|++++|.+.+..+. ..+++|++|++++|++++.. |..+..+++|+.|++++|.+.+
T Consensus 313 ~n~~~-~l~~--~~l~~L~~L~l~~n~~~~~~~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~ 387 (570)
T 2z63_A 313 NCKFG-QFPT--LKLKSLKRLTFTSNKGGNAFSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVIT 387 (570)
T ss_dssp SCBCS-SCCB--CBCSSCCEEEEESCBSCCBCCC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEE
T ss_pred cCccc-ccCc--ccccccCEEeCcCCcccccccc--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCcccc
Confidence 88887 4554 4788999999999999866655 78899999999999999654 7889999999999999999996
Q ss_pred cCcccccCcCCCCeeeccCCCCCCCCc-ccccccccccEEEecCCcccCCcCcCccCCCCCCeEEccCCcCc-ccCCccc
Q 048430 434 QIPTCLANLTSLRHLDFRSNSLNSTIP-STFWSLKYILAVDFSLNSLSGSLPLNIGNLEALGGLNLTGNQLS-GYIPSSI 511 (973)
Q Consensus 434 ~~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~ 511 (973)
..+. +..+++|++|++++|.+.+..| ..|..+++|+.|++++|++++..|..+.++++|+.|+|++|+++ +.+|..+
T Consensus 388 ~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~ 466 (570)
T 2z63_A 388 MSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIF 466 (570)
T ss_dssp EEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCC
T ss_pred cccc-ccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhh
Confidence 6555 9999999999999999988766 57899999999999999999999999999999999999999998 6799999
Q ss_pred ccCCcCCEEEcccCccccCCCCCcccccccccccccccccCCCCCccccccccccccccCCCcccccCCCC
Q 048430 512 GNLKNLDWLALARNAFQGPIPQSFGSLISLQSLDLSGNNISGEIPKSLEKLSRLVDFNVSFNGLEGEIPSG 582 (973)
Q Consensus 512 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~ 582 (973)
+.+++|+.|+|++|++++..|..|..+++|++|+|++|++++.+|..|..+++|+.|++++|+++|.+|..
T Consensus 467 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~ 537 (570)
T 2z63_A 467 TELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRI 537 (570)
T ss_dssp TTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTT
T ss_pred hcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcch
Confidence 99999999999999999988999999999999999999999998889999999999999999999999864
No 14
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=4e-51 Score=487.32 Aligned_cols=499 Identities=18% Similarity=0.206 Sum_probs=358.9
Q ss_pred cceEEEEEeeCCCCcEEEEecCCCCCCCcCCCCCCCCCCCcEEEecCCCCCCCCCcccccccCCcEEEccCCCCCCCCCc
Q 048430 32 VCNWVGVTCSIRHGRVAALSLPNLSLGGTLPPHVGNLSFLVSLNISGNSFYDTLPNELWHMRRLKIIDFSSNSLSGSLPG 111 (973)
Q Consensus 32 ~c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~ 111 (973)
.|.|.|| |+.. +++++ .+|+.+. ++|++|+|++|++.+..|..|+++++|++|+|++|++. .+++
T Consensus 3 ~C~~~~~-c~~~----------~~~l~-~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~-~~~~ 67 (549)
T 2z81_A 3 SCDASGV-CDGR----------SRSFT-SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRIN-TIEG 67 (549)
T ss_dssp EECTTSE-EECT----------TSCCS-SCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCC-EECT
T ss_pred cCCCCce-EECC----------CCccc-cccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcC-ccCh
Confidence 4999999 9643 34444 5666553 67777777777777666777777777777777777777 3444
Q ss_pred cccCCCCCccEEEeeCcccCCCCCccccCCCCCCeEEccCccccccCCccccCCCCCccEEEcccccccccCCCCCCCcc
Q 048430 112 DMCNSFTQLESFDVSSNKITGEFPSAIVNISSLKSIRLDNNSLSGSFPTDLCTRLPSLVQLRLLGNNITGRIPNREIPNE 191 (973)
Q Consensus 112 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~p~~ 191 (973)
+.|..+++|++|||++|++++..|..|+++++|++|+|++|++++.-....+..+++|++|++++|++.+.+| +..
T Consensus 68 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~----~~~ 143 (549)
T 2z81_A 68 DAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIR----RID 143 (549)
T ss_dssp TTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEEC----TTT
T ss_pred hhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccC----Hhh
Confidence 4556777777777777777766666677777777777777777632112345677777777777777433222 246
Q ss_pred ccCCCCccEEEecCCcccCccccccccCCcceeEEeecccccccCCCCC-CccccceeeeccccccccC--c-chhcccC
Q 048430 192 IGNLHNLKILDLGGNNIAGLIPSMIFNNSNMVAILLYGNHLSGHLPSSI-YLPNLENLFLWKNNLSGII--P-DSICNAS 267 (973)
Q Consensus 192 l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~-~l~~L~~L~L~~N~l~~~~--~-~~l~~l~ 267 (973)
|+++++|++|++++|++++.+|..+..+++|+.|++++|.+....+... .+++|++|++++|++++.. | .....++
T Consensus 144 ~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~ 223 (549)
T 2z81_A 144 FAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSS 223 (549)
T ss_dssp TTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCC
T ss_pred hhcccccCeeeccCCcccccChhhhhccccCceEecccCcccccchhhHhhcccccEEEccCCccccccccccchhhhhh
Confidence 7777777777777777777777777777777777777777653322221 3677888888888777642 1 2234467
Q ss_pred cccEEEeccccccccCC----CcccccccceEEEccCCcCCCCCCCcchhhhhhhccCCcCcEEEccCCCCCCCCCCccc
Q 048430 268 EATILELSSNLFSGLVP----NTFGNCRQLQILSLGDNQLTTGSSAQGQIFYSSLAKCRYLRVLVLDTNPLKGVIPNSIG 343 (973)
Q Consensus 268 ~L~~L~L~~N~i~~~~~----~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~ 343 (973)
+|+.|++++|.+++..+ ..+..+++|+.|++++|.+.+...-. ......+..+.+|+.|++.++.+..... +.
T Consensus 224 ~L~~L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~-~~~~~~~~~l~~L~~L~l~~~~i~~~~~--~~ 300 (549)
T 2z81_A 224 PMKKLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFN-PSESDVVSELGKVETVTIRRLHIPQFYL--FY 300 (549)
T ss_dssp CCCEEEEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCC-CCTTTCCCCCTTCCEEEEESCBCSCGGG--SC
T ss_pred cccceeccccccchhHHHHHHHHhhhhcccccccccccccccccccc-ccchhhhhhhcccccccccccccchhhh--cc
Confidence 77888888887765433 33456677888888888776532211 1112345667778888887776543210 00
Q ss_pred ccccccceeecccCCccccCCCCCCCCCcccEEEeecCccccccCccc-CCCCCCCEEEccCCcCCCCCch---hhhccC
Q 048430 344 NLSTSLENFYAGSSQLSGGIPVGFGNLSNLLVLSLVNNELAGAIPTVL-GKLQKLQGLDLNSNKLKGFIPT---DLCKLE 419 (973)
Q Consensus 344 ~l~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~~~---~~~~l~ 419 (973)
.++..+....+|+.|++++|.+. .+|..+ ..+++|++|+|++|++.+.+|. .+..++
T Consensus 301 ------------------~l~~~~~~~~~L~~L~l~~n~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~ 361 (549)
T 2z81_A 301 ------------------DLSTVYSLLEKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWP 361 (549)
T ss_dssp ------------------CCCHHHHHSTTCCEEEEESSCCC-CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSST
T ss_pred ------------------cchhhhhhcccceEEEeccCccc-cCCHHHHhcCccccEEEccCCccccccccchhhhhccc
Confidence 11111233467889999999987 566554 5788999999999999876643 367888
Q ss_pred cCCeeecCCccccCcCc--ccccCcCCCCeeeccCCCCCCCCcccccccccccEEEecCCcccCCcCcCccCCCCCCeEE
Q 048430 420 KLNTLLSNNNALQGQIP--TCLANLTSLRHLDFRSNSLNSTIPSTFWSLKYILAVDFSLNSLSGSLPLNIGNLEALGGLN 497 (973)
Q Consensus 420 ~L~~L~l~~N~l~~~~~--~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ 497 (973)
+|+.|++++|++++..+ ..+..+++|++|++++|+++ .+|..+..+++|+.|++++|+++ .+|..+ .++|+.|+
T Consensus 362 ~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~-~l~~~~--~~~L~~L~ 437 (549)
T 2z81_A 362 SLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIR-VVKTCI--PQTLEVLD 437 (549)
T ss_dssp TCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCS-CCCTTS--CTTCSEEE
T ss_pred cCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCc-cCChhhcccccccEEECCCCCcc-cccchh--cCCceEEE
Confidence 99999999999886543 45888899999999999998 57888888899999999999988 455443 26899999
Q ss_pred ccCCcCcccCCcccccCCcCCEEEcccCccccCCCCCcccccccccccccccccCCCCCccccccccccccccCCCcccc
Q 048430 498 LTGNQLSGYIPSSIGNLKNLDWLALARNAFQGPIPQSFGSLISLQSLDLSGNNISGEIPKSLEKLSRLVDFNVSFNGLEG 577 (973)
Q Consensus 498 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~ 577 (973)
|++|++++.+ ..+++|+.|+|++|+|+ .+|. ...+++|++|+|++|+|++.+|..+..+++|+.|++++|++.|
T Consensus 438 Ls~N~l~~~~----~~l~~L~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 511 (549)
T 2z81_A 438 VSNNNLDSFS----LFLPRLQELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 511 (549)
T ss_dssp CCSSCCSCCC----CCCTTCCEEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCC
T ss_pred CCCCChhhhc----ccCChhcEEECCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccC
Confidence 9999998643 57889999999999998 6776 5788999999999999999888889999999999999999988
Q ss_pred cCCC
Q 048430 578 EIPS 581 (973)
Q Consensus 578 ~~p~ 581 (973)
.+|.
T Consensus 512 ~~~~ 515 (549)
T 2z81_A 512 SCPR 515 (549)
T ss_dssp CHHH
T ss_pred CCcc
Confidence 8773
No 15
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=3e-52 Score=449.07 Aligned_cols=263 Identities=27% Similarity=0.463 Sum_probs=217.2
Q ss_pred cCCCCCccccccCceEEEEEEeC------CCeEEEEEEEeccchhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEE
Q 048430 680 NGFGESNLLGSGSFDNVYKATLA------NGVSVAVKVFNLQEDRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKAL 753 (973)
Q Consensus 680 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 753 (973)
++|...+.||+|+||+||+|++. +++.||||+++.......++|.+|+++|++++|||||+++|+|.+++..++
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 92 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 92 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence 45667789999999999999863 478899999987766677899999999999999999999999999999999
Q ss_pred EEEecCCCCHHHHhhhCC------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEE
Q 048430 754 IMQYMPQGSLEKWLYSHN------------YSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHL 821 (973)
Q Consensus 754 v~e~~~~gsL~~~l~~~~------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl 821 (973)
|||||++|+|.++++..+ ..+++.++..|+.|||+||+||| +++||||||||+|||+++++.+||
T Consensus 93 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDlKp~NILl~~~~~~Ki 169 (299)
T 4asz_A 93 VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLA---SQHFVHRDLATRNCLVGENLLVKI 169 (299)
T ss_dssp EEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCccCHhhEEECCCCcEEE
Confidence 999999999999998642 46999999999999999999999 799999999999999999999999
Q ss_pred eecccccccCCCCCcc-cccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCccccCcccHHHHHHhhC
Q 048430 822 GDFGIAKLLDGVDPVT-QTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFT-RRKPTNEMFTGEMSLKQWVAESL 899 (973)
Q Consensus 822 ~Dfgla~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 899 (973)
+|||+|+.....+... .....||+.|||||.+.+..++.++|||||||++|||+| |+.||...... .+...+..
T Consensus 170 ~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~--~~~~~i~~-- 245 (299)
T 4asz_A 170 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN--EVIECITQ-- 245 (299)
T ss_dssp CCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH--HHHHHHHH--
T ss_pred CCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHHHc--
Confidence 9999998764433222 233569999999999999999999999999999999999 89999753221 11111111
Q ss_pred CcchhhhcccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHHHHHhhc
Q 048430 900 PGAVTEVVDANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIKKILTQAL 969 (973)
Q Consensus 900 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~~~~~~~~ 969 (973)
+ .. ...+..|++++.+++.+||+.||++||||+|+.+.|+.+.+.-+...
T Consensus 246 -~--------~~-----------~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~~p~~l 295 (299)
T 4asz_A 246 -G--------RV-----------LQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKASPVYL 295 (299)
T ss_dssp -T--------CC-----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSCCCS
T ss_pred -C--------CC-----------CCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhcCCccc
Confidence 0 00 01123467789999999999999999999999999999887654443
No 16
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=1.1e-51 Score=451.07 Aligned_cols=261 Identities=24% Similarity=0.434 Sum_probs=209.3
Q ss_pred CCCCCccccccCceEEEEEEeC------CCeEEEEEEEeccchhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEE
Q 048430 681 GFGESNLLGSGSFDNVYKATLA------NGVSVAVKVFNLQEDRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALI 754 (973)
Q Consensus 681 ~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 754 (973)
+|...++||+|+||.||+|++. +++.||||+++.......++|.+|+++|++++|||||+++|+|.+++..++|
T Consensus 42 d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV 121 (329)
T 4aoj_A 42 DIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMV 121 (329)
T ss_dssp GEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEE
T ss_pred HeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 4556688999999999999864 4789999999876666678899999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhhhCC--------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEE
Q 048430 755 MQYMPQGSLEKWLYSHN--------------YSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAH 820 (973)
Q Consensus 755 ~e~~~~gsL~~~l~~~~--------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~k 820 (973)
||||++|+|.++++... ..+++.++..|+.|||+||+||| +++||||||||+|||+++++.+|
T Consensus 122 ~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDLKp~NILl~~~~~~K 198 (329)
T 4aoj_A 122 FEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLA---GLHFVHRDLATRNCLVGQGLVVK 198 (329)
T ss_dssp EECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETTTEEE
T ss_pred EEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecccccHhhEEECCCCcEE
Confidence 99999999999997642 35899999999999999999999 78999999999999999999999
Q ss_pred EeecccccccCCCCCc-ccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCccccCcccHHHHHHhh
Q 048430 821 LGDFGIAKLLDGVDPV-TQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFT-RRKPTNEMFTGEMSLKQWVAES 898 (973)
Q Consensus 821 l~Dfgla~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~ 898 (973)
|+|||+|+.....+.. ......||+.|||||++.+..++.++|||||||++|||+| |+.||...... .+...+...
T Consensus 199 i~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~--~~~~~i~~g 276 (329)
T 4aoj_A 199 IGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNT--EAIDCITQG 276 (329)
T ss_dssp ECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHH--HHHHHHHHT
T ss_pred EcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHH--HHHHHHHcC
Confidence 9999999876443322 2344579999999999999999999999999999999999 89999753221 111111110
Q ss_pred CCcchhhhcccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHHHHHhh
Q 048430 899 LPGAVTEVVDANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIKKILTQA 968 (973)
Q Consensus 899 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~~~~~~~ 968 (973)
. +...+..|++++.+++.+||+.||++||||+||+++|+.+.+..+.+
T Consensus 277 ~----------------------~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~pp~~ 324 (329)
T 4aoj_A 277 R----------------------ELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQAPPVY 324 (329)
T ss_dssp C----------------------CCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHSCC--
T ss_pred C----------------------CCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhCCccc
Confidence 0 01122346778999999999999999999999999999998754443
No 17
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=2.9e-51 Score=440.93 Aligned_cols=262 Identities=27% Similarity=0.445 Sum_probs=207.5
Q ss_pred hcCCCCCccccccCceEEEEEEeCCCeEEEEEEEeccc--hhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEEEE
Q 048430 679 TNGFGESNLLGSGSFDNVYKATLANGVSVAVKVFNLQE--DRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALIMQ 756 (973)
Q Consensus 679 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 756 (973)
.+++...++||+|+||+||+|+++. .||||+++... ....+.|.+|++++++++|||||+++|+|.+ +..++|||
T Consensus 35 ~~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmE 111 (307)
T 3omv_A 35 ASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQ 111 (307)
T ss_dssp TTSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred HHHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEE
Confidence 3567778999999999999999763 59999986442 3456789999999999999999999999865 56899999
Q ss_pred ecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCCCC-
Q 048430 757 YMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGVDP- 835 (973)
Q Consensus 757 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~- 835 (973)
||++|+|.++++.....+++.++..|+.|||+||+||| +++||||||||+|||+++++.+||+|||+|+.......
T Consensus 112 y~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH---~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~ 188 (307)
T 3omv_A 112 WCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGS 188 (307)
T ss_dssp CCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCCSSSEEEETTEEEEECCCSSCBC-------
T ss_pred cCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCccCHHHEEECCCCcEEEeeccCceecccCCcc
Confidence 99999999999887778999999999999999999999 78999999999999999999999999999987643222
Q ss_pred cccccccccccccCccCCC---CCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhcccccC
Q 048430 836 VTQTMTLATIGYMAPEYGS---EGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLL 912 (973)
Q Consensus 836 ~~~~~~~~~~~y~aPE~~~---~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 912 (973)
......+||+.|||||++. .+.++.++|||||||++|||+||+.||.+..... .+...+.... ..+.+.
T Consensus 189 ~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~-~~~~~~~~~~-------~~p~~~ 260 (307)
T 3omv_A 189 QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRD-QIIFMVGRGY-------ASPDLS 260 (307)
T ss_dssp -----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH-HHHHHHHTTC-------CCCCST
T ss_pred eeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHH-HHHHHHhcCC-------CCCCcc
Confidence 2234457999999999874 4468999999999999999999999997532211 1111111110 000000
Q ss_pred CCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHHHH
Q 048430 913 SREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIKKIL 965 (973)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~~~~ 965 (973)
..+..|++++.+++.+||+.||++||||+||+++|+.++..+
T Consensus 261 -----------~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~l 302 (307)
T 3omv_A 261 -----------KLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL 302 (307)
T ss_dssp -----------TSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred -----------cccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccC
Confidence 112346778999999999999999999999999999886543
No 18
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=3.4e-51 Score=442.83 Aligned_cols=253 Identities=24% Similarity=0.412 Sum_probs=208.8
Q ss_pred CCCCccccccCceEEEEEEeC------CCeEEEEEEEeccch-hhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEE
Q 048430 682 FGESNLLGSGSFDNVYKATLA------NGVSVAVKVFNLQED-RALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALI 754 (973)
Q Consensus 682 ~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 754 (973)
++..+.||+|+||+||+|++. +++.||||+++.... ...+.|.+|+.++++++|||||+++|+|.+++..++|
T Consensus 28 ~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV 107 (308)
T 4gt4_A 28 VRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMI 107 (308)
T ss_dssp EEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEE
T ss_pred CeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEEE
Confidence 445688999999999999862 578999999875433 3457899999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhhhCC---------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcE
Q 048430 755 MQYMPQGSLEKWLYSHN---------------YSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVA 819 (973)
Q Consensus 755 ~e~~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~ 819 (973)
||||++|+|.+++.... ..+++.++..|+.|||+||+||| +++||||||||+|||+++++.+
T Consensus 108 ~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDLK~~NILl~~~~~~ 184 (308)
T 4gt4_A 108 FSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLS---SHHVVHKDLATRNVLVYDKLNV 184 (308)
T ss_dssp EECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCE
T ss_pred EEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCCCCCCccccceEECCCCCE
Confidence 99999999999997532 35899999999999999999999 7999999999999999999999
Q ss_pred EEeecccccccCCCCCc-ccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCccccCcccHHHHHHh
Q 048430 820 HLGDFGIAKLLDGVDPV-TQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFT-RRKPTNEMFTGEMSLKQWVAE 897 (973)
Q Consensus 820 kl~Dfgla~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~ 897 (973)
||+|||+|+.....+.. ......||++|||||.+.++.++.++|||||||++|||+| |+.||.+.... .+...+..
T Consensus 185 Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~--~~~~~i~~ 262 (308)
T 4gt4_A 185 KISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ--DVVEMIRN 262 (308)
T ss_dssp EECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHH--HHHHHHHT
T ss_pred EECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHc
Confidence 99999999876433322 2344579999999999999999999999999999999999 89998753221 12221111
Q ss_pred hCCcchhhhcccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHH
Q 048430 898 SLPGAVTEVVDANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKI 961 (973)
Q Consensus 898 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~ 961 (973)
+. ..+.+..|+.++.+++.+||+.||++||||+||+++|+.+
T Consensus 263 ---~~-------------------~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~ 304 (308)
T 4gt4_A 263 ---RQ-------------------VLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW 304 (308)
T ss_dssp ---TC-------------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred ---CC-------------------CCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 00 0112235677899999999999999999999999999864
No 19
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.6e-48 Score=467.23 Aligned_cols=490 Identities=19% Similarity=0.154 Sum_probs=395.2
Q ss_pred CCcEEEEecCCCCCCCcCCCCCCCCCCCcEEEecCCCCCCCCCcccccccCCcEEEccCCCCCCCCCccccCCCCCccEE
Q 048430 44 HGRVAALSLPNLSLGGTLPPHVGNLSFLVSLNISGNSFYDTLPNELWHMRRLKIIDFSSNSLSGSLPGDMCNSFTQLESF 123 (973)
Q Consensus 44 ~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~~l~~L~~L 123 (973)
..+++.|+++++.+++..+..+.++++|++|+|++|++.+..|..|+++++|++|+|++|++. .+|+..|..+++|++|
T Consensus 27 ~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L 105 (570)
T 2z63_A 27 PFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQ-SLALGAFSGLSSLQKL 105 (570)
T ss_dssp CSSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCC-EECTTTTTTCTTCCEE
T ss_pred cccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCC-ccCHhhhcCccccccc
Confidence 357999999999999888889999999999999999998888889999999999999999998 5676777999999999
Q ss_pred EeeCcccCCCCCccccCCCCCCeEEccCccccc-cCCccccCCCCCccEEEcccccccccCCCCCCCccccCCCCc----
Q 048430 124 DVSSNKITGEFPSAIVNISSLKSIRLDNNSLSG-SFPTDLCTRLPSLVQLRLLGNNITGRIPNREIPNEIGNLHNL---- 198 (973)
Q Consensus 124 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~p~~l~~l~~L---- 198 (973)
++++|++++..+..|+++++|++|+|++|.+++ .+|.. +.++++|++|++++|++++. .|..++.+++|
T Consensus 106 ~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~-~~~l~~L~~L~l~~n~l~~~-----~~~~~~~l~~L~~~~ 179 (570)
T 2z63_A 106 VAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEY-FSNLTNLEHLDLSSNKIQSI-----YCTDLRVLHQMPLLN 179 (570)
T ss_dssp ECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGG-GGGCTTCCEEECTTSCCCEE-----CGGGGHHHHTCTTCC
T ss_pred cccccccccCCCccccccccccEEecCCCccceecChhh-hcccCCCCEEeCcCCcccee-----cHHHccchhccchhh
Confidence 999999997666689999999999999999984 35655 47899999999999999853 35678888888
Q ss_pred cEEEecCCcccCccccccccCCcceeEEeeccccccc-CCC-CCCccccceeeeccccc------cccCcchhcccC--c
Q 048430 199 KILDLGGNNIAGLIPSMIFNNSNMVAILLYGNHLSGH-LPS-SIYLPNLENLFLWKNNL------SGIIPDSICNAS--E 268 (973)
Q Consensus 199 ~~L~L~~N~l~~~~~~~~~~~~~L~~L~l~~n~l~~~-~~~-~~~l~~L~~L~L~~N~l------~~~~~~~l~~l~--~ 268 (973)
+.|++++|.+++..|..+... +|+.|++++|..... ++. ...+++++.+.+..+.+ .......+..+. .
T Consensus 180 ~~L~l~~n~l~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~ 258 (570)
T 2z63_A 180 LSLDLSLNPMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLT 258 (570)
T ss_dssp CEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSE
T ss_pred hhcccCCCCceecCHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccc
Confidence 899999999998888777665 899999999854321 111 11244444444432221 112222333332 2
Q ss_pred ccEEEeccc-cccccCCCcccccccceEEEccCCcCCCCCCCcchhhhhhhccCCcCcEEEccCCCCCCCCCCccccccc
Q 048430 269 ATILELSSN-LFSGLVPNTFGNCRQLQILSLGDNQLTTGSSAQGQIFYSSLAKCRYLRVLVLDTNPLKGVIPNSIGNLST 347 (973)
Q Consensus 269 L~~L~L~~N-~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 347 (973)
++.+++++| .+.+..+..|..+++|++|++++|.++.++. .+..+ +|+.|++++|.+. .+|.. ...
T Consensus 259 l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~l~~--------~~~~~-~L~~L~l~~n~~~-~l~~~---~l~ 325 (570)
T 2z63_A 259 IEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIERVKD--------FSYNF-GWQHLELVNCKFG-QFPTL---KLK 325 (570)
T ss_dssp EEEEEEEETTEEESCSTTTTGGGTTCSEEEEESCEECSCCB--------CCSCC-CCSEEEEESCBCS-SCCBC---BCS
T ss_pred hhhhhhhcchhhhhhchhhhcCcCcccEEEecCccchhhhh--------hhccC-CccEEeeccCccc-ccCcc---ccc
Confidence 455666666 5666666666666667777776666665332 23444 6666777766666 33331 224
Q ss_pred ccceeecccCCccccCCCCCCCCCcccEEEeecCcccccc--CcccCCCCCCCEEEccCCcCCCCCchhhhccCcCCeee
Q 048430 348 SLENFYAGSSQLSGGIPVGFGNLSNLLVLSLVNNELAGAI--PTVLGKLQKLQGLDLNSNKLKGFIPTDLCKLEKLNTLL 425 (973)
Q Consensus 348 ~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~--p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 425 (973)
.++.+++.+|.+.+..+. ..+++|++|++++|.+++.. |..+..+++|++|++++|.+.+..+ .+..+++|+.|+
T Consensus 326 ~L~~L~l~~n~~~~~~~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~-~~~~l~~L~~L~ 402 (570)
T 2z63_A 326 SLKRLTFTSNKGGNAFSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSS-NFLGLEQLEHLD 402 (570)
T ss_dssp SCCEEEEESCBSCCBCCC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEE-EEETCTTCCEEE
T ss_pred ccCEEeCcCCcccccccc--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCccccccc-cccccCCCCEEE
Confidence 566677777766655554 67899999999999998654 7789999999999999999996544 499999999999
Q ss_pred cCCccccCcCc-ccccCcCCCCeeeccCCCCCCCCcccccccccccEEEecCCccc-CCcCcCccCCCCCCeEEccCCcC
Q 048430 426 SNNNALQGQIP-TCLANLTSLRHLDFRSNSLNSTIPSTFWSLKYILAVDFSLNSLS-GSLPLNIGNLEALGGLNLTGNQL 503 (973)
Q Consensus 426 l~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l 503 (973)
+++|.+.+..+ ..+.++++|++|++++|.+.+..|..|..+++|+.|++++|+++ +.+|..+..+++|+.|+|++|++
T Consensus 403 l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l 482 (570)
T 2z63_A 403 FQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQL 482 (570)
T ss_dssp CTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCC
T ss_pred ccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCcc
Confidence 99999998776 57889999999999999999999999999999999999999998 57899999999999999999999
Q ss_pred cccCCcccccCCcCCEEEcccCccccCCCCCcccccccccccccccccCCCCCc
Q 048430 504 SGYIPSSIGNLKNLDWLALARNAFQGPIPQSFGSLISLQSLDLSGNNISGEIPK 557 (973)
Q Consensus 504 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 557 (973)
++..|..|+.+++|+.|+|++|++++.+|..|..+++|+.|+|++|++++..|.
T Consensus 483 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 536 (570)
T 2z63_A 483 EQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 536 (570)
T ss_dssp CEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred ccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcc
Confidence 988899999999999999999999998889999999999999999999988774
No 20
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=3.3e-48 Score=462.17 Aligned_cols=489 Identities=19% Similarity=0.208 Sum_probs=402.0
Q ss_pred EEEecCCCCCCCCCcccccccCCcEEEccCCCCCCCCCccccCCCCCccEEEeeCcccCCCCCccccCCCCCCeEEccCc
Q 048430 73 SLNISGNSFYDTLPNELWHMRRLKIIDFSSNSLSGSLPGDMCNSFTQLESFDVSSNKITGEFPSAIVNISSLKSIRLDNN 152 (973)
Q Consensus 73 ~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 152 (973)
..+.++|++ ..+|..+. ++|++|||++|++++ ++...|..+++|++|+|++|++++..|.+|+++++|++|+|++|
T Consensus 9 ~c~~~~~~l-~~ip~~~~--~~L~~L~Ls~n~l~~-~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n 84 (549)
T 2z81_A 9 VCDGRSRSF-TSIPSGLT--AAMKSLDLSFNKITY-IGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDN 84 (549)
T ss_dssp EEECTTSCC-SSCCSCCC--TTCCEEECCSSCCCE-ECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTS
T ss_pred eEECCCCcc-ccccccCC--CCccEEECcCCccCc-cChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCC
Confidence 457888888 57888775 799999999999984 44455689999999999999999888899999999999999999
Q ss_pred cccccCCccccCCCCCccEEEcccccccccCCCCCCCccccCCCCccEEEecCCcccCcc-ccccccCCcceeEEeeccc
Q 048430 153 SLSGSFPTDLCTRLPSLVQLRLLGNNITGRIPNREIPNEIGNLHNLKILDLGGNNIAGLI-PSMIFNNSNMVAILLYGNH 231 (973)
Q Consensus 153 ~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~-~~~~~~~~~L~~L~l~~n~ 231 (973)
+++ .+|...+..+++|++|+|++|++++. .+|..++++++|++|++++|++.+.+ +..+.++++|+.|++++|.
T Consensus 85 ~l~-~~~~~~~~~l~~L~~L~Ls~n~l~~~----~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~ 159 (549)
T 2z81_A 85 HLS-SLSSSWFGPLSSLKYLNLMGNPYQTL----GVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALS 159 (549)
T ss_dssp CCC-SCCHHHHTTCTTCCEEECTTCCCSSS----CSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETT
T ss_pred ccC-ccCHHHhccCCCCcEEECCCCccccc----chhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCc
Confidence 999 67777678999999999999999742 34678999999999999999954444 4789999999999999999
Q ss_pred ccccCCCCC-CccccceeeeccccccccCcchhcccCcccEEEeccccccccC---CCcccccccceEEEccCCcCCCCC
Q 048430 232 LSGHLPSSI-YLPNLENLFLWKNNLSGIIPDSICNASEATILELSSNLFSGLV---PNTFGNCRQLQILSLGDNQLTTGS 307 (973)
Q Consensus 232 l~~~~~~~~-~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~---~~~~~~l~~L~~L~L~~N~l~~~~ 307 (973)
+++..|... .+++|++|++++|.+.......+..+++|++|++++|++++.. ......+++|+.|++++|.++...
T Consensus 160 l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~ 239 (549)
T 2z81_A 160 LRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDES 239 (549)
T ss_dssp CCEECTTTTTTCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHH
T ss_pred ccccChhhhhccccCceEecccCcccccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhH
Confidence 999877665 5899999999999987543334567899999999999998763 233456789999999999886421
Q ss_pred CCcchhhhhhhccCCcCcEEEccCCCCCCCCCCcccccccccceeecccCCccccCCCCCCCCCcccEEEeecCccccc-
Q 048430 308 SAQGQIFYSSLAKCRYLRVLVLDTNPLKGVIPNSIGNLSTSLENFYAGSSQLSGGIPVGFGNLSNLLVLSLVNNELAGA- 386 (973)
Q Consensus 308 ~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~- 386 (973)
.......+..+++|+.+++++|.+.+...-. ......+..+.+|+.|++.++.+...
T Consensus 240 ---~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~-------------------~~~~~~~~~l~~L~~L~l~~~~i~~~~ 297 (549)
T 2z81_A 240 ---FNELLKLLRYILELSEVEFDDCTLNGLGDFN-------------------PSESDVVSELGKVETVTIRRLHIPQFY 297 (549)
T ss_dssp ---HHHHHGGGGGCTTCCEEEEESCEEECCSCCC-------------------CCTTTCCCCCTTCCEEEEESCBCSCGG
T ss_pred ---HHHHHHHhhhhcccccccccccccccccccc-------------------ccchhhhhhhcccccccccccccchhh
Confidence 1223445677889999999999887642110 01122356788999999999987632
Q ss_pred ----cCcccCCCCCCCEEEccCCcCCCCCchhh-hccCcCCeeecCCccccCcCc---ccccCcCCCCeeeccCCCCCCC
Q 048430 387 ----IPTVLGKLQKLQGLDLNSNKLKGFIPTDL-CKLEKLNTLLSNNNALQGQIP---TCLANLTSLRHLDFRSNSLNST 458 (973)
Q Consensus 387 ----~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~-~~l~~L~~L~l~~N~l~~~~~---~~~~~l~~L~~L~L~~N~l~~~ 458 (973)
.+..+...++|++|++++|.+. .+|..+ ..+++|+.|++++|++++.+| ..++.+++|++|++++|++++.
T Consensus 298 ~~~~l~~~~~~~~~L~~L~l~~n~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 376 (549)
T 2z81_A 298 LFYDLSTVYSLLEKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSM 376 (549)
T ss_dssp GSCCCCHHHHHSTTCCEEEEESSCCC-CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCH
T ss_pred hcccchhhhhhcccceEEEeccCccc-cCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCccccc
Confidence 1222344578999999999998 667666 579999999999999998764 3478899999999999999875
Q ss_pred Cc--ccccccccccEEEecCCcccCCcCcCccCCCCCCeEEccCCcCcccCCcccccCCcCCEEEcccCccccCCCCCcc
Q 048430 459 IP--STFWSLKYILAVDFSLNSLSGSLPLNIGNLEALGGLNLTGNQLSGYIPSSIGNLKNLDWLALARNAFQGPIPQSFG 536 (973)
Q Consensus 459 ~p--~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 536 (973)
.+ ..+..+++|+.||+++|+++ .+|..+..+++|++|+|++|+++ .+|..+. ++|+.|+|++|++++.+ .
T Consensus 377 ~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~-~l~~~~~--~~L~~L~Ls~N~l~~~~----~ 448 (549)
T 2z81_A 377 QKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIR-VVKTCIP--QTLEVLDVSNNNLDSFS----L 448 (549)
T ss_dssp HHHHHHGGGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCS-CCCTTSC--TTCSEEECCSSCCSCCC----C
T ss_pred ccchhhhhcCCCCCEEECCCCCCc-cCChhhcccccccEEECCCCCcc-cccchhc--CCceEEECCCCChhhhc----c
Confidence 43 56899999999999999999 78999999999999999999998 4555442 68999999999999643 5
Q ss_pred cccccccccccccccCCCCCccccccccccccccCCCcccccCCC-CCCCCccCccccccCcccccCC
Q 048430 537 SLISLQSLDLSGNNISGEIPKSLEKLSRLVDFNVSFNGLEGEIPS-GGPFVNFTADSFKQNYALCGSS 603 (973)
Q Consensus 537 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~-~~~~~~~~~~~~~~n~~~c~~~ 603 (973)
.+++|++|+|++|+|+ .+|. ...+++|+.|++++|++++.+|. ...+.++....+.+|++.|+++
T Consensus 449 ~l~~L~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 514 (549)
T 2z81_A 449 FLPRLQELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 514 (549)
T ss_dssp CCTTCCEEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHH
T ss_pred cCChhcEEECCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCCc
Confidence 7899999999999999 6776 57899999999999999998886 3566677778899999998876
No 21
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=3e-49 Score=430.28 Aligned_cols=250 Identities=22% Similarity=0.300 Sum_probs=210.4
Q ss_pred cCCCCCccccccCceEEEEEEe-CCCeEEEEEEEeccchhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEEEEec
Q 048430 680 NGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQEDRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALIMQYM 758 (973)
Q Consensus 680 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 758 (973)
..|...++||+|+||+||+|+. .+|+.||||+++.......+.+.+|+.+|++++|||||+++++|.+++..|+|||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 153 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 153 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence 4588889999999999999996 479999999998765555677899999999999999999999999999999999999
Q ss_pred CCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCCCCccc
Q 048430 759 PQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGVDPVTQ 838 (973)
Q Consensus 759 ~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~ 838 (973)
++|+|.+++... .+++.++..++.||+.||+||| +++||||||||+|||++.++.+||+|||+|+...... ...
T Consensus 154 ~gg~L~~~l~~~--~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~-~~~ 227 (346)
T 4fih_A 154 EGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV-PRR 227 (346)
T ss_dssp TTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSS-CCB
T ss_pred CCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEECCCCCEEEecCcCceecCCCC-Ccc
Confidence 999999999875 5999999999999999999999 8999999999999999999999999999998765332 233
Q ss_pred ccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhcccccCCCCchh
Q 048430 839 TMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLLSREDEE 918 (973)
Q Consensus 839 ~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 918 (973)
...+||+.|||||.+....|+.++||||+||++|||++|+.||..... ......+....+. .+
T Consensus 228 ~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~--~~~~~~i~~~~~~--------~~------- 290 (346)
T 4fih_A 228 KSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP--LKAMKMIRDNLPP--------RL------- 290 (346)
T ss_dssp CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--HHHHHHHHHSSCC--------CC-------
T ss_pred cccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH--HHHHHHHHcCCCC--------CC-------
Confidence 456899999999999999999999999999999999999999965221 1111111111100 00
Q ss_pred hhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 919 DADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 919 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
..+..+++++.+++.+||+.||++|||++|+++|
T Consensus 291 -----~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~H 324 (346)
T 4fih_A 291 -----KNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 324 (346)
T ss_dssp -----SCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred -----CccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 1112346678999999999999999999999986
No 22
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=2.6e-47 Score=463.20 Aligned_cols=531 Identities=20% Similarity=0.204 Sum_probs=403.0
Q ss_pred ecCCCCCCCcCCCCCCCCCCCcEEEecCCCCCCCCCcccccccCCcEEEccCCCCCCCCCccccCCCCCccEEEeeCccc
Q 048430 51 SLPNLSLGGTLPPHVGNLSFLVSLNISGNSFYDTLPNELWHMRRLKIIDFSSNSLSGSLPGDMCNSFTQLESFDVSSNKI 130 (973)
Q Consensus 51 ~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~~l~~L~~L~Ls~N~l 130 (973)
+-++.+|+ ++|+.+- +.+++|||++|+|++..|.+|.++++|++|||++|+|+ .+|++.|.++++|++|+|++|+|
T Consensus 37 ~c~~~~l~-~vP~~lp--~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~-~i~~~~f~~L~~L~~L~Ls~N~l 112 (635)
T 4g8a_A 37 QCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQ-TIEDGAYQSLSHLSTLILTGNPI 112 (635)
T ss_dssp ECTTSCCS-SCCSSSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCC-EECTTTTTTCTTCCEEECTTCCC
T ss_pred ECCCCCcC-ccCCCCC--cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCC-CcChhHhcCCCCCCEEEccCCcC
Confidence 44555666 6776442 47899999999998777788999999999999999998 68888889999999999999999
Q ss_pred CCCCCccccCCCCCCeEEccCccccccCCccccCCCCCccEEEcccccccccCCCCCCCccccCCCCccEEEecCCcccC
Q 048430 131 TGEFPSAIVNISSLKSIRLDNNSLSGSFPTDLCTRLPSLVQLRLLGNNITGRIPNREIPNEIGNLHNLKILDLGGNNIAG 210 (973)
Q Consensus 131 ~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~p~~l~~l~~L~~L~L~~N~l~~ 210 (973)
++..|.+|.++++|++|+|++|+|+ .+|...|+++++|++|+|++|+|++. .+|..++.+++|++|+|++|+|++
T Consensus 113 ~~l~~~~f~~L~~L~~L~Ls~N~l~-~l~~~~~~~L~~L~~L~Ls~N~l~~~----~~~~~~~~l~~L~~L~L~~N~l~~ 187 (635)
T 4g8a_A 113 QSLALGAFSGLSSLQKLVAVETNLA-SLENFPIGHLKTLKELNVAHNLIQSF----KLPEYFSNLTNLEHLDLSSNKIQS 187 (635)
T ss_dssp CEECGGGGTTCTTCCEEECTTSCCC-CSTTCCCTTCTTCCEEECCSSCCCCC----CCCGGGGGCTTCCEEECCSSCCCE
T ss_pred CCCCHHHhcCCCCCCEEECCCCcCC-CCChhhhhcCcccCeeccccCccccC----CCchhhccchhhhhhcccCccccc
Confidence 9777778999999999999999998 78888889999999999999999743 467889999999999999999998
Q ss_pred ccccccccCCcce----eEEeecccccccCCCCCCccccceeeeccccccc-cCcchhcccCcccEEEecccc------c
Q 048430 211 LIPSMIFNNSNMV----AILLYGNHLSGHLPSSIYLPNLENLFLWKNNLSG-IIPDSICNASEATILELSSNL------F 279 (973)
Q Consensus 211 ~~~~~~~~~~~L~----~L~l~~n~l~~~~~~~~~l~~L~~L~L~~N~l~~-~~~~~l~~l~~L~~L~L~~N~------i 279 (973)
..+..+..+.+++ .++++.|.+....+.......++.|++++|.... ..+..+..+..++...+..+. +
T Consensus 188 ~~~~~l~~L~~l~~~~~~~~ls~n~l~~i~~~~~~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l 267 (635)
T 4g8a_A 188 IYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNL 267 (635)
T ss_dssp ECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCC
T ss_pred cccccccchhhhhhhhhhhhcccCcccccCcccccchhhhhhhhhcccccccccchhhcCCccccccccccccccccccc
Confidence 8888887765543 6788999998877777767778889999886653 334567777777777765433 3
Q ss_pred cccCCCcccccccceEEEccCCcCCCCCCCcchhhhhhhccCCcCcEEEccCCCCCCCCCCcccccccccceeecccCCc
Q 048430 280 SGLVPNTFGNCRQLQILSLGDNQLTTGSSAQGQIFYSSLAKCRYLRVLVLDTNPLKGVIPNSIGNLSTSLENFYAGSSQL 359 (973)
Q Consensus 280 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~l~~l~l~~n~l 359 (973)
.......+..+..+..+.+..+........ ....+..+.+++.+.+.+|.+....+.. ....++.+.+.+|.+
T Consensus 268 ~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~----~~~~~~~~~~l~~l~~~~~~~~~~~~~~---~~~~L~~L~l~~~~~ 340 (635)
T 4g8a_A 268 EKFDKSALEGLCNLTIEEFRLAYLDYYLDG----IIDLFNCLTNVSSFSLVSVTIERVKDFS---YNFGWQHLELVNCKF 340 (635)
T ss_dssp SCCCTTTTGGGGGSEEEEEEEECCCSCEEE----CTTTTGGGTTCSEEEEESCEEEECGGGG---SCCCCSEEEEESCEE
T ss_pred ccccccccccccchhhhhhhhhhhcccccc----hhhhhhhhcccccccccccccccccccc---cchhhhhhhcccccc
Confidence 334445566667777776666554322111 1233455667777777777766443221 124567777777777
Q ss_pred cccCCCCCCCCCcccEEEeecCccccccCcccCCCCCCCEEEccCCcCCC--CCchhhhccCcCCeeecCCccccCcCcc
Q 048430 360 SGGIPVGFGNLSNLLVLSLVNNELAGAIPTVLGKLQKLQGLDLNSNKLKG--FIPTDLCKLEKLNTLLSNNNALQGQIPT 437 (973)
Q Consensus 360 ~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 437 (973)
.+..+ ..+..|+.+++++|.+... .....+++|+.|++++|.+.. ..+..+..+.+|+.+++..|.+.. .+.
T Consensus 341 ~~~~~---~~l~~L~~l~l~~n~~~~~--~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~-~~~ 414 (635)
T 4g8a_A 341 GQFPT---LKLKSLKRLTFTSNKGGNA--FSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVIT-MSS 414 (635)
T ss_dssp SSCCC---CBCTTCCEEEEESCCSCCB--CCCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEE-ECS
T ss_pred cCcCc---ccchhhhhcccccccCCCC--cccccccccccchhhccccccccccccchhhhhhhhhhhcccccccc-ccc
Confidence 65443 3456777888888877633 234567888888888888753 345667778888888888888774 445
Q ss_pred cccCcCCCCeeeccCCCCCCCCc-ccccccccccEEEecCCcccCCcCcCccCCCCCCeEEccCCcCc-ccCCcccccCC
Q 048430 438 CLANLTSLRHLDFRSNSLNSTIP-STFWSLKYILAVDFSLNSLSGSLPLNIGNLEALGGLNLTGNQLS-GYIPSSIGNLK 515 (973)
Q Consensus 438 ~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~ 515 (973)
.+..+++|+.+++++|......+ ..|..+++++.++++.|.+++..+..+..+++|+.|+|++|++. +..|..|..++
T Consensus 415 ~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~ 494 (635)
T 4g8a_A 415 NFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELR 494 (635)
T ss_dssp CCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCT
T ss_pred cccccccccchhhhhccccccccccccccccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhcc
Confidence 57778888888888877654443 56777888888888888888878888888888888888888743 45777888888
Q ss_pred cCCEEEcccCccccCCCCCcccccccccccccccccCCCCCccccccccccccccCCCcccccCCCC-CCC-CccCcccc
Q 048430 516 NLDWLALARNAFQGPIPQSFGSLISLQSLDLSGNNISGEIPKSLEKLSRLVDFNVSFNGLEGEIPSG-GPF-VNFTADSF 593 (973)
Q Consensus 516 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~-~~~-~~~~~~~~ 593 (973)
+|+.|+|++|+|++.+|..|+++++|++|+|++|+|++..|..|..+++|+.|||++|+|++.+|.. ..+ .++....+
T Consensus 495 ~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L 574 (635)
T 4g8a_A 495 NLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNL 574 (635)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEEC
T ss_pred ccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEe
Confidence 8888888888888888888888888888888888888888888888888888888888888887764 223 35566677
Q ss_pred ccCcccccCC
Q 048430 594 KQNYALCGSS 603 (973)
Q Consensus 594 ~~n~~~c~~~ 603 (973)
.+|++.|+|.
T Consensus 575 ~~Np~~C~C~ 584 (635)
T 4g8a_A 575 TQNDFACTCE 584 (635)
T ss_dssp TTCCBCCSGG
T ss_pred eCCCCcccCC
Confidence 8888888875
No 23
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=2.7e-49 Score=435.51 Aligned_cols=269 Identities=23% Similarity=0.368 Sum_probs=219.1
Q ss_pred CHHHHHHHhcCCCCCccccccCceEEEEEEeC------CCeEEEEEEEeccc-hhhHHHHHHHHHHHHhccC-CceeEEE
Q 048430 671 SYHELQQATNGFGESNLLGSGSFDNVYKATLA------NGVSVAVKVFNLQE-DRALKSFDTECEVMRRIRH-RNLIKIV 742 (973)
Q Consensus 671 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h-~niv~l~ 742 (973)
+..+++...++|...+.||+|+||.||+|++. .++.||||+++... ....+.|.+|+++|++++| ||||+++
T Consensus 55 ~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~ 134 (353)
T 4ase_A 55 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL 134 (353)
T ss_dssp CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred CCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEE
Confidence 33455566788999999999999999999853 24689999997654 3445789999999999965 8999999
Q ss_pred eeeecC-CeeEEEEEecCCCCHHHHhhhCC---------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccC
Q 048430 743 SSCSNP-GFKALIMQYMPQGSLEKWLYSHN---------------YSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDL 806 (973)
Q Consensus 743 ~~~~~~-~~~~lv~e~~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dl 806 (973)
|+|.++ +..++|||||++|+|.++++... ..+++.++..|+.|||+||+||| +++||||||
T Consensus 135 g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH---~~~iiHRDL 211 (353)
T 4ase_A 135 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDL 211 (353)
T ss_dssp EEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHH---HTTCCCSCC
T ss_pred EEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHh---hCCeecCcc
Confidence 999764 56899999999999999997632 35899999999999999999999 899999999
Q ss_pred CCCcEEeCCCCcEEEeecccccccCCCCCc-ccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCcc
Q 048430 807 KPNNVLLDDDMVAHLGDFGIAKLLDGVDPV-TQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFT-RRKPTNEM 884 (973)
Q Consensus 807 k~~Nill~~~~~~kl~Dfgla~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~ellt-g~~p~~~~ 884 (973)
||+|||+++++.+||+|||+|+........ ......||+.|||||.+.+..++.++|||||||++|||+| |+.||.+.
T Consensus 212 K~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~ 291 (353)
T 4ase_A 212 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 291 (353)
T ss_dssp SGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred CccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCC
Confidence 999999999999999999999876543332 3445679999999999999999999999999999999998 89999764
Q ss_pred ccCcccHHHHHHhhCCcchhhhcccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHHH
Q 048430 885 FTGEMSLKQWVAESLPGAVTEVVDANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIKKI 964 (973)
Q Consensus 885 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~~~ 964 (973)
...+ .+...+.... +...+..+++++.+++.+||+.||++||||+|++++|+.+.+.
T Consensus 292 ~~~~-~~~~~i~~g~----------------------~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~ 348 (353)
T 4ase_A 292 KIDE-EFCRRLKEGT----------------------RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 348 (353)
T ss_dssp CCSH-HHHHHHHHTC----------------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CHHH-HHHHHHHcCC----------------------CCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHH
Confidence 3222 1222111110 0111234567799999999999999999999999999998765
Q ss_pred H
Q 048430 965 L 965 (973)
Q Consensus 965 ~ 965 (973)
-
T Consensus 349 ~ 349 (353)
T 4ase_A 349 N 349 (353)
T ss_dssp T
T ss_pred h
Confidence 3
No 24
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=4.4e-49 Score=429.65 Aligned_cols=251 Identities=22% Similarity=0.354 Sum_probs=203.5
Q ss_pred hcCCCCCccccccCceEEEEEEe-CCCeEEEEEEEeccc--hhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEEE
Q 048430 679 TNGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQE--DRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALIM 755 (973)
Q Consensus 679 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 755 (973)
.++|...+.||+|+||+||+|+. .+|+.||||+++... ....+.+.+|++++++++|||||++++++.+++..|+||
T Consensus 23 me~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVm 102 (350)
T 4b9d_A 23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVM 102 (350)
T ss_dssp CCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEE
Confidence 36799999999999999999985 579999999997552 344678999999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCCC
Q 048430 756 QYMPQGSLEKWLYSHN-YSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGVD 834 (973)
Q Consensus 756 e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 834 (973)
|||++|+|.+++...+ ..+++.+++.|+.||+.||+||| +++||||||||+|||++.++.+||+|||+|+.....
T Consensus 103 Ey~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~- 178 (350)
T 4b9d_A 103 DYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST- 178 (350)
T ss_dssp ECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHH-
T ss_pred eCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCHHHEEECCCCCEEEcccccceeecCC-
Confidence 9999999999997654 45789999999999999999999 899999999999999999999999999999876421
Q ss_pred CcccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhcccccCCC
Q 048430 835 PVTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLLSR 914 (973)
Q Consensus 835 ~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 914 (973)
.......+||+.|||||.+.+..++.++||||+||++|||++|+.||.... ..+.+.....+. ...
T Consensus 179 ~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~-----~~~~~~~i~~~~--------~~~- 244 (350)
T 4b9d_A 179 VELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGS-----MKNLVLKIISGS--------FPP- 244 (350)
T ss_dssp HHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS-----HHHHHHHHHHTC--------CCC-
T ss_pred cccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC-----HHHHHHHHHcCC--------CCC-
Confidence 112344579999999999999999999999999999999999999996532 111111111110 000
Q ss_pred CchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 915 EDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
.+..+++++.+++.+||+.||++|||++|+++|
T Consensus 245 ----------~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h 277 (350)
T 4b9d_A 245 ----------VSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEK 277 (350)
T ss_dssp ----------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred ----------CCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 011345678999999999999999999999986
No 25
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=4.3e-49 Score=427.89 Aligned_cols=256 Identities=22% Similarity=0.257 Sum_probs=209.8
Q ss_pred cCCCCCccccccCceEEEEEEe-CCCeEEEEEEEeccchhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEEEEec
Q 048430 680 NGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQEDRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALIMQYM 758 (973)
Q Consensus 680 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 758 (973)
+.|...++||+|+||.||+|+. .+|+.||||+++.... ..+|+.++++++|||||++++++.+++..|+|||||
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 132 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELL 132 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEecc
Confidence 4577778999999999999995 5799999999975432 247999999999999999999999999999999999
Q ss_pred CCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCC-cEEEeecccccccCCCCCc-
Q 048430 759 PQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDM-VAHLGDFGIAKLLDGVDPV- 836 (973)
Q Consensus 759 ~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~-~~kl~Dfgla~~~~~~~~~- 836 (973)
++|+|.++++..+ .+++.++..++.||+.||+||| +++||||||||+|||++.++ .+||+|||+|+........
T Consensus 133 ~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~ 208 (336)
T 4g3f_A 133 EGGSLGQLIKQMG-CLPEDRALYYLGQALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGK 208 (336)
T ss_dssp TTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC-------
T ss_pred CCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCccc
Confidence 9999999998765 7999999999999999999999 89999999999999999987 6999999999876532211
Q ss_pred ---ccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhcccccCC
Q 048430 837 ---TQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLLS 913 (973)
Q Consensus 837 ---~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 913 (973)
.....+||+.|||||.+.+..++.++|||||||++|||++|+.||......+. ........ + ..
T Consensus 209 ~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~-~~~i~~~~-~-~~---------- 275 (336)
T 4g3f_A 209 SLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPL-CLKIASEP-P-PI---------- 275 (336)
T ss_dssp -----CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCC-HHHHHHSC-C-GG----------
T ss_pred ceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHH-HHHHHcCC-C-Cc----------
Confidence 12335799999999999999999999999999999999999999976443322 11111110 0 00
Q ss_pred CCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHHHHH
Q 048430 914 REDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIKKILT 966 (973)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~~~~~ 966 (973)
...+..+++++.+++.+||+.||++|||+.|++++|....+...
T Consensus 276 ---------~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~ 319 (336)
T 4g3f_A 276 ---------REIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVG 319 (336)
T ss_dssp ---------GGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTT
T ss_pred ---------hhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhh
Confidence 01123456778999999999999999999999999988776543
No 26
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=3.2e-48 Score=458.84 Aligned_cols=461 Identities=20% Similarity=0.238 Sum_probs=345.2
Q ss_pred cEEEecCCCCCCCCCcccccccCCcEEEccCCCCCCCCCccccCCCCCccEEEeeCcccCCCCCccccCCCCCCeEEccC
Q 048430 72 VSLNISGNSFYDTLPNELWHMRRLKIIDFSSNSLSGSLPGDMCNSFTQLESFDVSSNKITGEFPSAIVNISSLKSIRLDN 151 (973)
Q Consensus 72 ~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 151 (973)
++||+++|+++ .+|..+. ++|++|||++|.+. .++...|..+++|++|+|++|++++..|..|+++++|++|+|++
T Consensus 3 ~~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~-~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~ 78 (520)
T 2z7x_B 3 FLVDRSKNGLI-HVPKDLS--QKTTILNISQNYIS-ELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSH 78 (520)
T ss_dssp CEEECTTSCCS-SCCCSCC--TTCSEEECCSSCCC-CCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCS
T ss_pred ceEecCCCCcc-ccccccc--ccccEEECCCCccc-ccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCC
Confidence 57899999996 6888776 89999999999998 45555568899999999999999987788999999999999999
Q ss_pred ccccccCCccccCCCCCccEEEcccccccccCCCCCCCccccCCCCccEEEecCCcccCccccccccCCcc--eeEEeec
Q 048430 152 NSLSGSFPTDLCTRLPSLVQLRLLGNNITGRIPNREIPNEIGNLHNLKILDLGGNNIAGLIPSMIFNNSNM--VAILLYG 229 (973)
Q Consensus 152 N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L--~~L~l~~ 229 (973)
|+|+ .+|.. .+++|++|+|++|++++. .+|..|+++++|++|+|++|++++ ..+..+++| +.|++++
T Consensus 79 N~l~-~lp~~---~l~~L~~L~L~~N~l~~~----~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~ 147 (520)
T 2z7x_B 79 NKLV-KISCH---PTVNLKHLDLSFNAFDAL----PICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVL 147 (520)
T ss_dssp SCCC-EEECC---CCCCCSEEECCSSCCSSC----CCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEE
T ss_pred Ccee-ecCcc---ccCCccEEeccCCccccc----cchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeec
Confidence 9998 78876 688999999999998742 357889999999999999999875 345555555 6666666
Q ss_pred ccc--cccCCCCC-Ccc-ccceeeeccccccccCcc-hhcccCcccEEEecccc-------ccccCCCcccccccceEEE
Q 048430 230 NHL--SGHLPSSI-YLP-NLENLFLWKNNLSGIIPD-SICNASEATILELSSNL-------FSGLVPNTFGNCRQLQILS 297 (973)
Q Consensus 230 n~l--~~~~~~~~-~l~-~L~~L~L~~N~l~~~~~~-~l~~l~~L~~L~L~~N~-------i~~~~~~~~~~l~~L~~L~ 297 (973)
|.+ .+..|... .+. +...+++++|++.+.+++ .+..+++|+.|++++|. +.+.+| .|+.+++|+.|+
T Consensus 148 n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-~l~~l~~L~~L~ 226 (520)
T 2z7x_B 148 GETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA-KLQTNPKLSNLT 226 (520)
T ss_dssp CTTTTSSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHH-GGGGCTTCCEEE
T ss_pred ccccccccccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchh-hhccccchhhcc
Confidence 666 44444332 111 233455566655543332 45556666666666665 444444 455566666666
Q ss_pred ccCCcCCCCCCCcchhhhhhhccCCcCcEEEccCCCCCCCCCCcccccccccceeecccCCccccCCCCCCCCCcccEEE
Q 048430 298 LGDNQLTTGSSAQGQIFYSSLAKCRYLRVLVLDTNPLKGVIPNSIGNLSTSLENFYAGSSQLSGGIPVGFGNLSNLLVLS 377 (973)
Q Consensus 298 L~~N~l~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~ 377 (973)
+++|.++.... ..... ...+++|+.|++++|++.+.+|..+... ....+++|+.++
T Consensus 227 l~~~~l~~~~~---~~~~~-~~~~~~L~~L~l~~n~l~~~~p~~~~~~--------------------~~~~l~~L~~l~ 282 (520)
T 2z7x_B 227 LNNIETTWNSF---IRILQ-LVWHTTVWYFSISNVKLQGQLDFRDFDY--------------------SGTSLKALSIHQ 282 (520)
T ss_dssp EEEEEEEHHHH---HHHHH-HHHTSSCSEEEEEEEEEESCCCCCCCCC--------------------CSCCCCEEEEEE
T ss_pred ccccccCHHHH---HHHHH-HhhhCcccEEEeecccccCccccchhhc--------------------ccccCceeEecc
Confidence 66655542100 00000 0112355555555555554444332111 017889999999
Q ss_pred eecCccccccC-cccCCC---CCCCEEEccCCcCCCCCchhhhccCcCCeeecCCccccCcCcccccCcCCCCeeeccCC
Q 048430 378 LVNNELAGAIP-TVLGKL---QKLQGLDLNSNKLKGFIPTDLCKLEKLNTLLSNNNALQGQIPTCLANLTSLRHLDFRSN 453 (973)
Q Consensus 378 Ls~n~l~~~~p-~~~~~l---~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N 453 (973)
+++|.+ .+| ..+..+ .+|+.|++++|.+.... .+..+++|+.|++++|++++..|..++++++|++|++++|
T Consensus 283 l~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N 358 (520)
T 2z7x_B 283 VVSDVF--GFPQSYIYEIFSNMNIKNFTVSGTRMVHML--CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMN 358 (520)
T ss_dssp EEECCC--CSCTHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSS
T ss_pred ccccce--ecchhhhhcccccCceeEEEcCCCcccccc--chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCC
Confidence 999999 344 455444 67999999999987432 1267899999999999999989999999999999999999
Q ss_pred CCCC--CCcccccccccccEEEecCCcccCCcCcC-ccCCCCCCeEEccCCcCcccCCcccccCCcCCEEEcccCccccC
Q 048430 454 SLNS--TIPSTFWSLKYILAVDFSLNSLSGSLPLN-IGNLEALGGLNLTGNQLSGYIPSSIGNLKNLDWLALARNAFQGP 530 (973)
Q Consensus 454 ~l~~--~~p~~~~~l~~L~~L~ls~N~l~~~~p~~-~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 530 (973)
++++ .+|..+..+++|+.|++++|++++.+|.. +..+++|+.|+|++|++++..|..+. ++|+.|+|++|+++ .
T Consensus 359 ~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ 435 (520)
T 2z7x_B 359 QLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-S 435 (520)
T ss_dssp CCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-C
T ss_pred ccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-c
Confidence 9986 56678999999999999999999756654 88899999999999999888887765 79999999999999 8
Q ss_pred CCCCcccccccccccccccccCCCCCcc-ccccccccccccCCCcccccCC
Q 048430 531 IPQSFGSLISLQSLDLSGNNISGEIPKS-LEKLSRLVDFNVSFNGLEGEIP 580 (973)
Q Consensus 531 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~l~ls~N~l~~~~p 580 (973)
+|..+..+++|++|+|++|+|++ +|.. +..+++|+.|++++|++++.++
T Consensus 436 ip~~~~~l~~L~~L~L~~N~l~~-l~~~~~~~l~~L~~L~l~~N~~~c~c~ 485 (520)
T 2z7x_B 436 IPKQVVKLEALQELNVASNQLKS-VPDGIFDRLTSLQKIWLHTNPWDCSCP 485 (520)
T ss_dssp CCGGGGGCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred cchhhhcCCCCCEEECCCCcCCc-cCHHHhccCCcccEEECcCCCCcccCC
Confidence 88888899999999999999995 5554 8999999999999999998765
No 27
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=4.4e-48 Score=420.03 Aligned_cols=268 Identities=21% Similarity=0.289 Sum_probs=201.3
Q ss_pred cCCCCCccccccCceEEEEEEeCCCeEEEEEEEeccchhhHHHHHHHHHHHHhccCCceeEEEeeeecCC----eeEEEE
Q 048430 680 NGFGESNLLGSGSFDNVYKATLANGVSVAVKVFNLQEDRALKSFDTECEVMRRIRHRNLIKIVSSCSNPG----FKALIM 755 (973)
Q Consensus 680 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----~~~lv~ 755 (973)
++|...++||+|+||+||+|++. |+.||||+++..... ...+..|+..+.+++|||||+++++|.+++ ..++||
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~~-g~~VAvK~l~~~~~~-~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~ 80 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREER-SWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS 80 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEET-TEEEEEEEECGGGHH-HHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEEC-CEEEEEEEECccchh-hHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEe
Confidence 34566789999999999999984 899999998654322 223345666667889999999999997653 579999
Q ss_pred EecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhc-----CCCCeEEccCCCCcEEeCCCCcEEEeeccccccc
Q 048430 756 QYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHG-----YSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLL 830 (973)
Q Consensus 756 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~-----~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~ 830 (973)
|||++|+|.++++.. .+++..+.+++.|+|+||+|||+. ..++||||||||+|||++.++.+||+|||+|+..
T Consensus 81 Ey~~~gsL~~~l~~~--~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~ 158 (303)
T 3hmm_A 81 DYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH 158 (303)
T ss_dssp ECCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEE
T ss_pred cCCCCCcHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccc
Confidence 999999999999876 599999999999999999999932 1238999999999999999999999999999876
Q ss_pred CCCCCc---ccccccccccccCccCCCCC------CCCcchhHHHHHHHHHHHHhCCCCCCccccCcc----------cH
Q 048430 831 DGVDPV---TQTMTLATIGYMAPEYGSEG------IVSISGDVYSFGILMMETFTRRKPTNEMFTGEM----------SL 891 (973)
Q Consensus 831 ~~~~~~---~~~~~~~~~~y~aPE~~~~~------~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~----------~~ 891 (973)
...... .....+||+.|||||++.+. .++.++|||||||++|||+||+.||........ ..
T Consensus 159 ~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~ 238 (303)
T 3hmm_A 159 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSV 238 (303)
T ss_dssp ETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCH
T ss_pred cCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchH
Confidence 543322 12345799999999987654 467899999999999999999887654322211 11
Q ss_pred HHHHHhhCCcchhhhcccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHHH
Q 048430 892 KQWVAESLPGAVTEVVDANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIKKI 964 (973)
Q Consensus 892 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~~~ 964 (973)
..+.... .+..+.. ..+.......+++.+.+++.+||+.||++||||+||++.|+++.++
T Consensus 239 ~~~~~~~--------~~~~~rp-----~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~ 298 (303)
T 3hmm_A 239 EEMRKVV--------CEQKLRP-----NIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298 (303)
T ss_dssp HHHHHHH--------TTSCCCC-----CCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HHHHHHH--------hcccCCC-----CCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHH
Confidence 1111111 1111100 0011112234677899999999999999999999999999988754
No 28
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=7.3e-48 Score=470.73 Aligned_cols=450 Identities=18% Similarity=0.232 Sum_probs=270.6
Q ss_pred CCCcEEEecCCCCCCCCCcccccccCCcEEEc-cCCCCCCCCCccccCCCCCccE-----EE---------e-eCcccC-
Q 048430 69 SFLVSLNISGNSFYDTLPNELWHMRRLKIIDF-SSNSLSGSLPGDMCNSFTQLES-----FD---------V-SSNKIT- 131 (973)
Q Consensus 69 ~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L-s~n~l~~~~p~~~~~~l~~L~~-----L~---------L-s~N~l~- 131 (973)
.+++.|+|++|++.|.+|++|++|++|++||| ++|.++|..|-........+.. +. . ....+.
T Consensus 323 ~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~ 402 (876)
T 4ecn_A 323 GRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSD 402 (876)
T ss_dssp SCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCH
T ss_pred CCEEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhH
Confidence 57899999999999999999999999999999 9998887654321110000000 00 0 000000
Q ss_pred ----------CCCCccccCCCCCCeEEccC--ccccccCCccccCCCCCccEEEccccccccc-CCCC-----------C
Q 048430 132 ----------GEFPSAIVNISSLKSIRLDN--NSLSGSFPTDLCTRLPSLVQLRLLGNNITGR-IPNR-----------E 187 (973)
Q Consensus 132 ----------~~~p~~~~~l~~L~~L~L~~--N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~-~~~~-----------~ 187 (973)
...+........++.+.+.. |+++| ||..+ .++++|++|+|++|+|+|. ++.. .
T Consensus 403 l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~-IP~~l-~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~ 480 (876)
T 4ecn_A 403 LLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITF-ISKAI-QRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQY 480 (876)
T ss_dssp HHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGG-GGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHH
T ss_pred HHHHHhhhCccccccccccccchhhceeccccCcccc-hhHHH-hcCCCCCEEECcCCcCCCCccccccccccccccccc
Confidence 00011111222333333333 55554 55442 4455555555555555541 0000 1
Q ss_pred CCcccc--CCCCccEEEecCCcccCccccccccCCcceeEEeeccc-ccc-cCCCC--------CCccccceeeeccccc
Q 048430 188 IPNEIG--NLHNLKILDLGGNNIAGLIPSMIFNNSNMVAILLYGNH-LSG-HLPSS--------IYLPNLENLFLWKNNL 255 (973)
Q Consensus 188 ~p~~l~--~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~l~~n~-l~~-~~~~~--------~~l~~L~~L~L~~N~l 255 (973)
+|..++ ++++|++|+|++|++.+.+|..+.++++|+.|++++|+ +++ .+|.. ..+++|++|+|++|++
T Consensus 481 iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L 560 (876)
T 4ecn_A 481 ENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNL 560 (876)
T ss_dssp TTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCC
T ss_pred CChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcC
Confidence 456666 77777777777777777777777776666666666665 554 33321 1244777777777777
Q ss_pred cccCcc--hhcccCcccEEEeccccccccCCCcccccccceEEEccCCcCCCCCCCcchhhhhhhccCCc-CcEEEccCC
Q 048430 256 SGIIPD--SICNASEATILELSSNLFSGLVPNTFGNCRQLQILSLGDNQLTTGSSAQGQIFYSSLAKCRY-LRVLVLDTN 332 (973)
Q Consensus 256 ~~~~~~--~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~-L~~L~L~~N 332 (973)
+ .+|. .++.+++|+.|+|++|+++ .+| .|+.+++|+.|+|++|+++.++ ..+..+++ |+.|+|++|
T Consensus 561 ~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~~lp--------~~l~~l~~~L~~L~Ls~N 629 (876)
T 4ecn_A 561 E-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIEEIP--------EDFCAFTDQVEGLGFSHN 629 (876)
T ss_dssp C-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCSCCC--------TTSCEECTTCCEEECCSS
T ss_pred C-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccccch--------HHHhhccccCCEEECcCC
Confidence 7 5666 7777777777777777777 445 6777777777777777776432 23455555 666666666
Q ss_pred CCCCCCCCcccccccccceeecccCCccccCCCCCCCC--CcccEEEeecCccccccCccc---C--CCCCCCEEEccCC
Q 048430 333 PLKGVIPNSIGNLSTSLENFYAGSSQLSGGIPVGFGNL--SNLLVLSLVNNELAGAIPTVL---G--KLQKLQGLDLNSN 405 (973)
Q Consensus 333 ~l~~~~p~~~~~l~~~l~~l~l~~n~l~~~~p~~~~~l--~~L~~L~Ls~n~l~~~~p~~~---~--~l~~L~~L~Ls~N 405 (973)
++. .+|. .+..+ ++|+.|+|++|++.+.+|... . .+++|+.|+|++|
T Consensus 630 ~L~-~lp~-------------------------~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N 683 (876)
T 4ecn_A 630 KLK-YIPN-------------------------IFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYN 683 (876)
T ss_dssp CCC-SCCS-------------------------CCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSS
T ss_pred CCC-cCch-------------------------hhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCC
Confidence 655 3333 23333 337777777777766554322 1 2336667777777
Q ss_pred cCCCCCchh-hhccCcCCeeecCCccccCcCcccccCcCCCCeeeccCCCCCCCCcccccccccccEEEecCCcccCCcC
Q 048430 406 KLKGFIPTD-LCKLEKLNTLLSNNNALQGQIPTCLANLTSLRHLDFRSNSLNSTIPSTFWSLKYILAVDFSLNSLSGSLP 484 (973)
Q Consensus 406 ~l~~~~~~~-~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p 484 (973)
+++ .+|.. +..+++|+.|+|++|+++ .+|..+.... +..+..+++|+.|++++|+++ .+|
T Consensus 684 ~L~-~lp~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~~~~----------------~~~l~nl~~L~~L~Ls~N~L~-~lp 744 (876)
T 4ecn_A 684 EIQ-KFPTELFATGSPISTIILSNNLMT-SIPENSLKPK----------------DGNYKNTYLLTTIDLRFNKLT-SLS 744 (876)
T ss_dssp CCC-SCCHHHHHTTCCCSEEECCSCCCS-CCCTTSSSCT----------------TSCCTTGGGCCEEECCSSCCC-CCC
T ss_pred cCC-ccCHHHHccCCCCCEEECCCCcCC-ccChHHhccc----------------cccccccCCccEEECCCCCCc-cch
Confidence 766 33433 335666666666666666 3333222111 000011224455555555554 444
Q ss_pred cCcc--CCCCCCeEEccCCcCcccCCcccccCCcCCEEEc------ccCccccCCCCCcccccccccccccccccCCCCC
Q 048430 485 LNIG--NLEALGGLNLTGNQLSGYIPSSIGNLKNLDWLAL------ARNAFQGPIPQSFGSLISLQSLDLSGNNISGEIP 556 (973)
Q Consensus 485 ~~~~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L------s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 556 (973)
..+. .+++|+.|+|++|+|++ +|..++.+++|+.|+| ++|++.+.+|..|..+++|+.|+|++|+| +.+|
T Consensus 745 ~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip 822 (876)
T 4ecn_A 745 DDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVD 822 (876)
T ss_dssp GGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCC
T ss_pred HHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCCCcccccccccChHHHhcCCCCCEEECCCCCC-CccC
Confidence 4444 55555555555555553 4555555555555555 55899999999999999999999999999 6899
Q ss_pred ccccccccccccccCCCcccccCC
Q 048430 557 KSLEKLSRLVDFNVSFNGLEGEIP 580 (973)
Q Consensus 557 ~~~~~l~~L~~l~ls~N~l~~~~p 580 (973)
..+. ++|+.|||++|++...-+
T Consensus 823 ~~l~--~~L~~LdLs~N~l~~i~~ 844 (876)
T 4ecn_A 823 EKLT--PQLYILDIADNPNISIDV 844 (876)
T ss_dssp SCCC--SSSCEEECCSCTTCEEEC
T ss_pred Hhhc--CCCCEEECCCCCCCccCh
Confidence 8876 699999999999876544
No 29
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=3.3e-48 Score=414.11 Aligned_cols=245 Identities=26% Similarity=0.392 Sum_probs=197.8
Q ss_pred CCCccccccCceEEEEEEe-CCCeEEEEEEEeccc--hhhHHHHHHHHHHHHhccCCceeEEEeeeec----CCeeEEEE
Q 048430 683 GESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQE--DRALKSFDTECEVMRRIRHRNLIKIVSSCSN----PGFKALIM 755 (973)
Q Consensus 683 ~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~~lv~ 755 (973)
...+.||+|+||+||+|.. .+++.||+|++.... ....+.|.+|++++++++|||||+++++|.+ ++..|+||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 4456799999999999985 468999999987542 3445789999999999999999999999854 35689999
Q ss_pred EecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCC--eEEccCCCCcEEeCC-CCcEEEeecccccccCC
Q 048430 756 QYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTP--IIHCDLKPNNVLLDD-DMVAHLGDFGIAKLLDG 832 (973)
Q Consensus 756 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~--ivH~dlk~~Nill~~-~~~~kl~Dfgla~~~~~ 832 (973)
|||++|+|.+++.... .+++..+..++.||+.||+||| +++ ||||||||+|||++. ++.+||+|||+|+....
T Consensus 109 Ey~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~ylH---~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~ 184 (290)
T 3fpq_A 109 ELMTSGTLKTYLKRFK-VMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA 184 (290)
T ss_dssp ECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred eCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCCC
Confidence 9999999999998765 7999999999999999999999 666 999999999999974 78999999999986432
Q ss_pred CCCcccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhcccccC
Q 048430 833 VDPVTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLL 912 (973)
Q Consensus 833 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 912 (973)
......+||+.|||||.+.+ .++.++|||||||++|||+||+.||.... ...........+....
T Consensus 185 ---~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~----~~~~~~~~i~~~~~~~------- 249 (290)
T 3fpq_A 185 ---SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQ----NAAQIYRRVTSGVKPA------- 249 (290)
T ss_dssp ---TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCS----SHHHHHHHHTTTCCCG-------
T ss_pred ---CccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCC----cHHHHHHHHHcCCCCC-------
Confidence 22345679999999998764 69999999999999999999999996422 1222222111110000
Q ss_pred CCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 913 SREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
..+..+++++.+++.+||+.||++|||++|+++|
T Consensus 250 -----------~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~H 283 (290)
T 3fpq_A 250 -----------SFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp -----------GGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred -----------CCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 0111234568899999999999999999999986
No 30
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=4.1e-48 Score=431.71 Aligned_cols=250 Identities=22% Similarity=0.303 Sum_probs=210.7
Q ss_pred cCCCCCccccccCceEEEEEEe-CCCeEEEEEEEeccchhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEEEEec
Q 048430 680 NGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQEDRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALIMQYM 758 (973)
Q Consensus 680 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 758 (973)
+.|...+.||+|+||.||+|+. .+|+.||||++........+.+.+|+.+|++++|||||+++++|.+++..|+|||||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~ 230 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 230 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCC
Confidence 5688899999999999999996 479999999998766555677899999999999999999999999999999999999
Q ss_pred CCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCCCCccc
Q 048430 759 PQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGVDPVTQ 838 (973)
Q Consensus 759 ~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~ 838 (973)
++|+|.+++... .+++.++..|+.||+.||+||| +++||||||||+|||++.+|.+||+|||+|+...... ...
T Consensus 231 ~gG~L~~~i~~~--~l~e~~~~~~~~qil~aL~ylH---~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~-~~~ 304 (423)
T 4fie_A 231 EGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV-PRR 304 (423)
T ss_dssp TTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSC-CCB
T ss_pred CCCcHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHH---HCCeecccCCHHHEEEcCCCCEEEecCccceECCCCC-ccc
Confidence 999999999865 5999999999999999999999 8999999999999999999999999999998765432 233
Q ss_pred ccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhcccccCCCCchh
Q 048430 839 TMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLLSREDEE 918 (973)
Q Consensus 839 ~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 918 (973)
...+||+.|||||.+....|+.++|||||||++|||++|+.||..... ......+....+ +.+
T Consensus 305 ~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~--~~~~~~i~~~~~--------~~~------- 367 (423)
T 4fie_A 305 KSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP--LKAMKMIRDNLP--------PRL------- 367 (423)
T ss_dssp CCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--HHHHHHHHHSCC--------CCC-------
T ss_pred cccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH--HHHHHHHHcCCC--------CCC-------
Confidence 456899999999999999999999999999999999999999965221 111111111110 001
Q ss_pred hhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 919 DADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 919 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
..+..+++++.+|+.+||+.||++|||++|+++|
T Consensus 368 -----~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~H 401 (423)
T 4fie_A 368 -----KNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 401 (423)
T ss_dssp -----SCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred -----cccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 0112245678999999999999999999999986
No 31
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=1.8e-48 Score=469.58 Aligned_cols=459 Identities=18% Similarity=0.244 Sum_probs=291.0
Q ss_pred CCCcEEEecCCCCCCCCCcccccccCCcEEEccCCCC------CC------CCCccccCCCCCccEEEeeCcccCCCCCc
Q 048430 69 SFLVSLNISGNSFYDTLPNELWHMRRLKIIDFSSNSL------SG------SLPGDMCNSFTQLESFDVSSNKITGEFPS 136 (973)
Q Consensus 69 ~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l------~~------~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~ 136 (973)
.+++.|+|++|++.|.+|+++++|++|++|||++|.+ .| .+|... +..|+ +++++|.+.+.+|.
T Consensus 81 ~~V~~L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~---~~~l~-l~l~~~~l~~~~~~ 156 (636)
T 4eco_A 81 GRVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQ---KQKMR-MHYQKTFVDYDPRE 156 (636)
T ss_dssp CCEEEEECTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHH---HHHHH-THHHHHHTCCCGGG
T ss_pred CCEEEEEecCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHH---HHHHH-hhHHHhhhccCchh
Confidence 4789999999999999999999999999999999987 33 455544 45677 88888988888887
Q ss_pred cccC-CCCCCeEEccCccccccCCccccCCCCCccEEEcc--cccccccCCCCCCCccccCCCCccEEEecCCcccCc--
Q 048430 137 AIVN-ISSLKSIRLDNNSLSGSFPTDLCTRLPSLVQLRLL--GNNITGRIPNREIPNEIGNLHNLKILDLGGNNIAGL-- 211 (973)
Q Consensus 137 ~~~~-l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~L~--~N~l~~~~~~~~~p~~l~~l~~L~~L~L~~N~l~~~-- 211 (973)
.+.. +..+..+++....+.. .....++.+.+. .|+++| +|..|+++++|++|+|++|++++.
T Consensus 157 ~~~~~~~~l~~~~l~~~~~~~-------~~~~~l~~l~l~~~~n~l~~------ip~~l~~l~~L~~L~Ls~n~l~~~~~ 223 (636)
T 4eco_A 157 DFSDLIKDCINSDPQQKSIKK-------SSRITLKDTQIGQLSNNITF------VSKAVMRLTKLRQFYMGNSPFVAENI 223 (636)
T ss_dssp GSCHHHHHHHHHCTTSCCCCC-------CCCCCCCTTTTTCCSCEEEE------ECGGGGGCTTCCEEEEESCCCCGGGB
T ss_pred hHHHHHHHHhhcCcccccccc-------ccccchhhhhhccccCCCcc------CCHHHhcccCCCEEECcCCccccccc
Confidence 7663 2234444444433331 122334444443 588885 467899999999999999999985
Q ss_pred ---------------cccccc--cCCcceeEEeecccccccCCCCC-Cccccceeeecccc-ccc-cCcchhcccCcccE
Q 048430 212 ---------------IPSMIF--NNSNMVAILLYGNHLSGHLPSSI-YLPNLENLFLWKNN-LSG-IIPDSICNASEATI 271 (973)
Q Consensus 212 ---------------~~~~~~--~~~~L~~L~l~~n~l~~~~~~~~-~l~~L~~L~L~~N~-l~~-~~~~~l~~l~~L~~ 271 (973)
+|..+. ++++|+.|++++|.+.+.+|..+ .+++|++|+|++|+ +++ .+|..++.+.
T Consensus 224 ~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~---- 299 (636)
T 4eco_A 224 CEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALA---- 299 (636)
T ss_dssp SSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHH----
T ss_pred cccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhh----
Confidence 777777 75555555555555555544333 35555555555554 554 4454444430
Q ss_pred EEeccccccccCCCcccccccceEEEccCCcCCCCCCCcchhhhhhhccCCcCcEEEccCCCCCCCCCCcccccccccce
Q 048430 272 LELSSNLFSGLVPNTFGNCRQLQILSLGDNQLTTGSSAQGQIFYSSLAKCRYLRVLVLDTNPLKGVIPNSIGNLSTSLEN 351 (973)
Q Consensus 272 L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~l~~ 351 (973)
.+..+++|++|++++|+++.++. ...+.++++|+.|++++|++.|.+| .
T Consensus 300 --------------~~~~l~~L~~L~L~~n~l~~ip~------~~~l~~l~~L~~L~L~~N~l~g~ip-~---------- 348 (636)
T 4eco_A 300 --------------DAPVGEKIQIIYIGYNNLKTFPV------ETSLQKMKKLGMLECLYNQLEGKLP-A---------- 348 (636)
T ss_dssp --------------HSGGGGTCCEEECCSSCCSSCCC------HHHHTTCTTCCEEECCSCCCEEECC-C----------
T ss_pred --------------ccccCCCCCEEECCCCcCCccCc------hhhhccCCCCCEEeCcCCcCccchh-h----------
Confidence 00001445555555554443211 0134444455555555554444333 2
Q ss_pred eecccCCccccCCCCCCCCCcccEEEeecCccccccCcccCCCCC-CCEEEccCCcCCCCCchhhhccC--cCCeeecCC
Q 048430 352 FYAGSSQLSGGIPVGFGNLSNLLVLSLVNNELAGAIPTVLGKLQK-LQGLDLNSNKLKGFIPTDLCKLE--KLNTLLSNN 428 (973)
Q Consensus 352 l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~-L~~L~Ls~N~l~~~~~~~~~~l~--~L~~L~l~~ 428 (973)
|..+++|++|++++|+++ .+|..+..+++ |++|+|++|+++ .+|..+..+. +|+.|++++
T Consensus 349 ---------------~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~ 411 (636)
T 4eco_A 349 ---------------FGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSY 411 (636)
T ss_dssp ---------------CEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCS
T ss_pred ---------------hCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcC
Confidence 334445555555555555 45555555555 555555555555 4454444433 555555555
Q ss_pred ccccCcCccccc-------CcCCCCeeeccCCCCCCCCcccccccccccEEEecCCcccCCcCcCccC--------CCCC
Q 048430 429 NALQGQIPTCLA-------NLTSLRHLDFRSNSLNSTIPSTFWSLKYILAVDFSLNSLSGSLPLNIGN--------LEAL 493 (973)
Q Consensus 429 N~l~~~~~~~~~-------~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~--------l~~L 493 (973)
|.+++.+|..+. .+++|++|++++|++++..+..+..+++|+.|++++|+++ .+|..+.. +++|
T Consensus 412 N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~~~~~~~~l~~L 490 (636)
T 4eco_A 412 NEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLT-EIPKNSLKDENENFKNTYLL 490 (636)
T ss_dssp SCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCS-BCCSSSSEETTEECTTGGGC
T ss_pred CcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCC-CcCHHHhccccccccccCCc
Confidence 555555555555 5556666666666666433333444666666666666666 44433222 2277
Q ss_pred CeEEccCCcCcccCCcccc--cCCcCCEEEcccCccccCCCCCcccccccccccc------cccccCCCCCccccccccc
Q 048430 494 GGLNLTGNQLSGYIPSSIG--NLKNLDWLALARNAFQGPIPQSFGSLISLQSLDL------SGNNISGEIPKSLEKLSRL 565 (973)
Q Consensus 494 ~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L------s~N~l~~~~p~~~~~l~~L 565 (973)
+.|+|++|+++ .+|..+. .+++|+.|+|++|++++ +|..+..+++|+.|+| ++|++.+.+|..+..+++|
T Consensus 491 ~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L 568 (636)
T 4eco_A 491 TSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSL 568 (636)
T ss_dssp CEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSC
T ss_pred cEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCCCC
Confidence 77777777777 5666665 77777777777777775 6777777777777777 6788999999999999999
Q ss_pred cccccCCCcccccCCCCCCCCccCccccccCccccc
Q 048430 566 VDFNVSFNGLEGEIPSGGPFVNFTADSFKQNYALCG 601 (973)
Q Consensus 566 ~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~~c~ 601 (973)
+.|+|++|++ +.+|..- ..++....+.+|+..|-
T Consensus 569 ~~L~Ls~N~l-~~ip~~~-~~~L~~L~Ls~N~l~~~ 602 (636)
T 4eco_A 569 TQLQIGSNDI-RKVNEKI-TPNISVLDIKDNPNISI 602 (636)
T ss_dssp CEEECCSSCC-CBCCSCC-CTTCCEEECCSCTTCEE
T ss_pred CEEECCCCcC-CccCHhH-hCcCCEEECcCCCCccc
Confidence 9999999999 7888752 25677777888887763
No 32
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=3.2e-48 Score=415.69 Aligned_cols=249 Identities=24% Similarity=0.318 Sum_probs=208.5
Q ss_pred cCCCCCccccccCceEEEEEEe-CCCeEEEEEEEeccc---hhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEEE
Q 048430 680 NGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQE---DRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALIM 755 (973)
Q Consensus 680 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 755 (973)
++|...+.||+|+||+||+|+. .+++.||||++.... ....+.+.+|++++++++|||||++++++.+++..|+||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 4688899999999999999985 579999999997542 334578999999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCCCC
Q 048430 756 QYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGVDP 835 (973)
Q Consensus 756 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 835 (973)
|||++|+|.+++...+ .+++.++..++.||+.||+||| +++||||||||+|||++.++.+||+|||+|+.......
T Consensus 112 Ey~~gG~L~~~i~~~~-~l~e~~~~~~~~qi~~al~ylH---~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~ 187 (311)
T 4aw0_A 112 SYAKNGELLKYIRKIG-SFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK 187 (311)
T ss_dssp CCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTT
T ss_pred ecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCC
Confidence 9999999999998765 7999999999999999999999 89999999999999999999999999999998754332
Q ss_pred -cccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhcccccCCC
Q 048430 836 -VTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLLSR 914 (973)
Q Consensus 836 -~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 914 (973)
......+||+.|||||.+.+..++.++||||+||++|||++|+.||..... .........+ .+.
T Consensus 188 ~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~-----~~~~~~i~~~--------~~~-- 252 (311)
T 4aw0_A 188 QARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE-----GLIFAKIIKL--------EYD-- 252 (311)
T ss_dssp CCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHHHHHT--------CCC--
T ss_pred cccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHcC--------CCC--
Confidence 233456899999999999999999999999999999999999999965221 1111111100 000
Q ss_pred CchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 915 EDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
.+..+++++.+++.+|++.||++|||++|++.+
T Consensus 253 ----------~p~~~s~~~~dli~~lL~~dp~~R~t~~e~~~~ 285 (311)
T 4aw0_A 253 ----------FPEKFFPKARDLVEKLLVLDATKRLGCEEMEGY 285 (311)
T ss_dssp ----------CCTTCCHHHHHHHHHHSCSSGGGSTTSGGGTCH
T ss_pred ----------CCcccCHHHHHHHHHHccCCHhHCcChHHHcCC
Confidence 011235668899999999999999999987544
No 33
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=5.9e-47 Score=447.94 Aligned_cols=459 Identities=19% Similarity=0.185 Sum_probs=377.6
Q ss_pred EEEecCCCCCCCcCCCCCCCCCCCcEEEecCCCCCCCCCcccccccCCcEEEccCCCCCCCCCccccCCCCCccEEEeeC
Q 048430 48 AALSLPNLSLGGTLPPHVGNLSFLVSLNISGNSFYDTLPNELWHMRRLKIIDFSSNSLSGSLPGDMCNSFTQLESFDVSS 127 (973)
Q Consensus 48 ~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~~l~~L~~L~Ls~ 127 (973)
+.||+++++++ .+|..+. ++|++|+|++|++.+..|..|.++++|++|+|++|++++ ++++.|..+++|++|||++
T Consensus 3 ~~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~-~~~~~~~~l~~L~~L~Ls~ 78 (520)
T 2z7x_B 3 FLVDRSKNGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQY-LDISVFKFNQELEYLDLSH 78 (520)
T ss_dssp CEEECTTSCCS-SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCE-EEGGGGTTCTTCCEEECCS
T ss_pred ceEecCCCCcc-ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCC-cChHHhhcccCCCEEecCC
Confidence 46899999999 6998877 899999999999988888899999999999999999994 5445568999999999999
Q ss_pred cccCCCCCccccCCCCCCeEEccCccccc-cCCccccCCCCCccEEEcccccccccCCCCCCCccccCCCCc--cEEEec
Q 048430 128 NKITGEFPSAIVNISSLKSIRLDNNSLSG-SFPTDLCTRLPSLVQLRLLGNNITGRIPNREIPNEIGNLHNL--KILDLG 204 (973)
Q Consensus 128 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~p~~l~~l~~L--~~L~L~ 204 (973)
|+++ .+|.. .+++|++|+|++|++++ .+|. .+..+++|++|+|++|+|++ ..++.+++| ++|+++
T Consensus 79 N~l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p~-~~~~l~~L~~L~L~~n~l~~--------~~~~~l~~L~L~~L~l~ 146 (520)
T 2z7x_B 79 NKLV-KISCH--PTVNLKHLDLSFNAFDALPICK-EFGNMSQLKFLGLSTTHLEK--------SSVLPIAHLNISKVLLV 146 (520)
T ss_dssp SCCC-EEECC--CCCCCSEEECCSSCCSSCCCCG-GGGGCTTCCEEEEEESSCCG--------GGGGGGTTSCEEEEEEE
T ss_pred Ccee-ecCcc--ccCCccEEeccCCccccccchh-hhccCCcceEEEecCcccch--------hhccccccceeeEEEee
Confidence 9999 67766 89999999999999984 3444 45789999999999999974 357778888 999999
Q ss_pred CCcc--cCccccccccCC-cceeEEeecccccccCCCCC--Cccccceeeecccc-------ccccCcchhcccCcccEE
Q 048430 205 GNNI--AGLIPSMIFNNS-NMVAILLYGNHLSGHLPSSI--YLPNLENLFLWKNN-------LSGIIPDSICNASEATIL 272 (973)
Q Consensus 205 ~N~l--~~~~~~~~~~~~-~L~~L~l~~n~l~~~~~~~~--~l~~L~~L~L~~N~-------l~~~~~~~l~~l~~L~~L 272 (973)
+|++ .+..|..+..+. +...+++++|.+.+.++... .+++|+.|++++|. +.+.+| .++.+++|+.|
T Consensus 147 ~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-~l~~l~~L~~L 225 (520)
T 2z7x_B 147 LGETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA-KLQTNPKLSNL 225 (520)
T ss_dssp ECTTTTSSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHH-GGGGCTTCCEE
T ss_pred cccccccccccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchh-hhccccchhhc
Confidence 9999 888888888776 45577889999888776544 48999999999998 777666 78999999999
Q ss_pred EeccccccccCCCccc---ccccceEEEccCCcCCC-CCCCcchhhhhhhccCCcCcEEEccCCCCCCCCC-Cccccccc
Q 048430 273 ELSSNLFSGLVPNTFG---NCRQLQILSLGDNQLTT-GSSAQGQIFYSSLAKCRYLRVLVLDTNPLKGVIP-NSIGNLST 347 (973)
Q Consensus 273 ~L~~N~i~~~~~~~~~---~l~~L~~L~L~~N~l~~-~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~ 347 (973)
++++|.+++..+..+. ..++|++|++++|++++ ++... +.....++++|+.+++++|.+ .+| ..+..+
T Consensus 226 ~l~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~---~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~-- 298 (520)
T 2z7x_B 226 TLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRD---FDYSGTSLKALSIHQVVSDVF--GFPQSYIYEI-- 298 (520)
T ss_dssp EEEEEEEEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCC---CCCCSCCCCEEEEEEEEECCC--CSCTHHHHHH--
T ss_pred cccccccCHHHHHHHHHHhhhCcccEEEeecccccCccccch---hhcccccCceeEeccccccce--ecchhhhhcc--
Confidence 9999998754322211 24589999999999984 33221 111127899999999999988 444 332221
Q ss_pred ccceeecccCCccccCCCCCCCCCcccEEEeecCccccccCcccCCCCCCCEEEccCCcCCCCCchhhhccCcCCeeecC
Q 048430 348 SLENFYAGSSQLSGGIPVGFGNLSNLLVLSLVNNELAGAIPTVLGKLQKLQGLDLNSNKLKGFIPTDLCKLEKLNTLLSN 427 (973)
Q Consensus 348 ~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~ 427 (973)
....+|+.|++++|.+.... .+..+++|++|++++|++++.+|..+..+++|+.|+++
T Consensus 299 --------------------~~~~~L~~L~l~~n~l~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 356 (520)
T 2z7x_B 299 --------------------FSNMNIKNFTVSGTRMVHML--CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQ 356 (520)
T ss_dssp --------------------HHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECC
T ss_pred --------------------cccCceeEEEcCCCcccccc--chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEcc
Confidence 01146888889888876332 13678889999999999998888888899999999999
Q ss_pred CccccC--cCcccccCcCCCCeeeccCCCCCCCCcc-cccccccccEEEecCCcccCCcCcCccCCCCCCeEEccCCcCc
Q 048430 428 NNALQG--QIPTCLANLTSLRHLDFRSNSLNSTIPS-TFWSLKYILAVDFSLNSLSGSLPLNIGNLEALGGLNLTGNQLS 504 (973)
Q Consensus 428 ~N~l~~--~~~~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 504 (973)
+|++++ .+|..+..+++|++|++++|++++.+|. .+..+++|+.|++++|++++..|..+. ++|+.|+|++|+++
T Consensus 357 ~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~ 434 (520)
T 2z7x_B 357 MNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK 434 (520)
T ss_dssp SSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC
T ss_pred CCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc
Confidence 999986 5567788999999999999999885555 488889999999999999888877665 79999999999999
Q ss_pred ccCCcccccCCcCCEEEcccCccccCCCCC-cccccccccccccccccCCCCC
Q 048430 505 GYIPSSIGNLKNLDWLALARNAFQGPIPQS-FGSLISLQSLDLSGNNISGEIP 556 (973)
Q Consensus 505 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~Ls~N~l~~~~p 556 (973)
.+|..+..+++|+.|+|++|+|+ .+|.. |..+++|++|+|++|++++..+
T Consensus 435 -~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c~c~ 485 (520)
T 2z7x_B 435 -SIPKQVVKLEALQELNVASNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCP 485 (520)
T ss_dssp -CCCGGGGGCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred -ccchhhhcCCCCCEEECCCCcCC-ccCHHHhccCCcccEEECcCCCCcccCC
Confidence 88888889999999999999999 56654 9999999999999999997654
No 34
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.7e-47 Score=404.78 Aligned_cols=246 Identities=23% Similarity=0.370 Sum_probs=192.8
Q ss_pred cCCCCCccccccCceEEEEEEe-CCCeEEEEEEEeccc---hhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEEE
Q 048430 680 NGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQE---DRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALIM 755 (973)
Q Consensus 680 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 755 (973)
++|...+.||+|+||+||+|+. .+|+.||||+++... ....+.+.+|++++++++||||+++++++.+++..|+||
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 92 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 6899999999999999999985 579999999997542 233567999999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCCCC
Q 048430 756 QYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGVDP 835 (973)
Q Consensus 756 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 835 (973)
||+ +|+|.+++...+ .+++.++..++.||+.||+||| +++|+||||||+|||++.++.+||+|||+|+.....
T Consensus 93 Ey~-~g~L~~~l~~~~-~l~e~~~~~~~~qi~~al~ylH---~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~-- 165 (275)
T 3hyh_A 93 EYA-GNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG-- 165 (275)
T ss_dssp ECC-CEEHHHHHHHSC-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCTTTEEECTTCCEEECCSSCC--------
T ss_pred eCC-CCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccccCChHHeEECCCCCEEEeecCCCeecCCC--
Confidence 999 679999998765 7999999999999999999999 899999999999999999999999999999876432
Q ss_pred cccccccccccccCccCCCCCCC-CcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhcccccCCC
Q 048430 836 VTQTMTLATIGYMAPEYGSEGIV-SISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLLSR 914 (973)
Q Consensus 836 ~~~~~~~~~~~y~aPE~~~~~~~-~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 914 (973)
......+||+.|||||.+.+..+ +.++||||+||++|||++|+.||.... ..........+. .
T Consensus 166 ~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~-----~~~~~~~i~~~~--------~--- 229 (275)
T 3hyh_A 166 NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES-----IPVLFKNISNGV--------Y--- 229 (275)
T ss_dssp ---------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHTC--------C---
T ss_pred CccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCC-----HHHHHHHHHcCC--------C---
Confidence 22344679999999999887765 689999999999999999999996521 122221111000 0
Q ss_pred CchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 915 EDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
..+..+++++.+++.+||+.||++|||++|+++|
T Consensus 230 ---------~~p~~~s~~~~~li~~~L~~dP~~R~s~~eil~h 263 (275)
T 3hyh_A 230 ---------TLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp ---------CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHC
T ss_pred ---------CCCCCCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence 0011245668899999999999999999999987
No 35
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=1.8e-47 Score=410.30 Aligned_cols=248 Identities=26% Similarity=0.298 Sum_probs=197.8
Q ss_pred cCCCCCccccccCceEEEEEEe----CCCeEEEEEEEeccc--hhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEE
Q 048430 680 NGFGESNLLGSGSFDNVYKATL----ANGVSVAVKVFNLQE--DRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKAL 753 (973)
Q Consensus 680 ~~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 753 (973)
++|...+.||+|+||+||+|+. .+++.||||+++... ......+.+|++++++++|||||++++++.+++..|+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 4688999999999999999985 257899999986542 2223468899999999999999999999999999999
Q ss_pred EEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCC
Q 048430 754 IMQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGV 833 (973)
Q Consensus 754 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 833 (973)
|||||++|+|.+++...+ .+++.++..++.||+.||+||| +++||||||||+|||++.++.+||+|||+|+.....
T Consensus 104 vmEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 179 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSKEV-MFTEEDVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDH 179 (304)
T ss_dssp EECCCTTCEEHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECTTSCEEEESSEEEEC----
T ss_pred EEEcCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHeEEcCCCCEEecccccceeccCC
Confidence 999999999999998765 7999999999999999999999 899999999999999999999999999999865432
Q ss_pred CCcccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhcccccCC
Q 048430 834 DPVTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLLS 913 (973)
Q Consensus 834 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 913 (973)
. ......+||+.|||||.+.+..++.++||||+||++|||+||+.||.+.... .+...+.. ...
T Consensus 180 ~-~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~--~~~~~i~~-----------~~~-- 243 (304)
T 3ubd_A 180 E-KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRK--ETMTMILK-----------AKL-- 243 (304)
T ss_dssp --CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHH-----------CCC--
T ss_pred C-ccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHH--HHHHHHHc-----------CCC--
Confidence 2 2234467999999999999999999999999999999999999999653211 11111111 000
Q ss_pred CCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCH-----HHHHHH
Q 048430 914 REDEEDADDFATKKTCISYIMSLALKCSAEIPEERINV-----KDALAD 957 (973)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~-----~evl~~ 957 (973)
..+..+++++.+++.+||+.||++|||+ +|+++|
T Consensus 244 ----------~~p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~H 282 (304)
T 3ubd_A 244 ----------GMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRH 282 (304)
T ss_dssp ----------CCCTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTS
T ss_pred ----------CCCCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcC
Confidence 0112345678999999999999999984 677765
No 36
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=1.2e-45 Score=440.32 Aligned_cols=463 Identities=18% Similarity=0.196 Sum_probs=300.3
Q ss_pred EEEecCCCCCCCcCCCCCCCCCCCcEEEecCCCCCCCCCcccccccCCcEEEccCCCCCCCCCccccCCCCCccEEEeeC
Q 048430 48 AALSLPNLSLGGTLPPHVGNLSFLVSLNISGNSFYDTLPNELWHMRRLKIIDFSSNSLSGSLPGDMCNSFTQLESFDVSS 127 (973)
Q Consensus 48 ~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~~l~~L~~L~Ls~ 127 (973)
+.+|++++++++ +|..+. ++|++|+|++|.+.+..|..|.++++|++|+|++|+++ .++++.|..+++|++|||++
T Consensus 34 ~~l~ls~~~L~~-ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~Ls~ 109 (562)
T 3a79_B 34 SMVDYSNRNLTH-VPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIR-SLDFHVFLFNQDLEYLDVSH 109 (562)
T ss_dssp CEEECTTSCCCS-CCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCC-EECTTTTTTCTTCCEEECTT
T ss_pred cEEEcCCCCCcc-CCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCC-cCCHHHhCCCCCCCEEECCC
Confidence 566777777763 665543 56666666666665555556666666666666666665 23333345555566666666
Q ss_pred cccCCCCCccccCCCCCCeEEccCccccccCCc-cccCCCCCccEEEcccccccccCCCCCCCccccCCCCc--cEEEec
Q 048430 128 NKITGEFPSAIVNISSLKSIRLDNNSLSGSFPT-DLCTRLPSLVQLRLLGNNITGRIPNREIPNEIGNLHNL--KILDLG 204 (973)
Q Consensus 128 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~p~~l~~l~~L--~~L~L~ 204 (973)
|+++ .+|.. .+++|++|+|++|+++ .+|. ..|.++++|++|+|++|+|++ ..+..+++| ++|+|+
T Consensus 110 N~l~-~lp~~--~l~~L~~L~Ls~N~l~-~l~~p~~~~~l~~L~~L~L~~n~l~~--------~~~~~l~~L~L~~L~L~ 177 (562)
T 3a79_B 110 NRLQ-NISCC--PMASLRHLDLSFNDFD-VLPVCKEFGNLTKLTFLGLSAAKFRQ--------LDLLPVAHLHLSCILLD 177 (562)
T ss_dssp SCCC-EECSC--CCTTCSEEECCSSCCS-BCCCCGGGGGCTTCCEEEEECSBCCT--------TTTGGGTTSCEEEEEEE
T ss_pred CcCC-ccCcc--ccccCCEEECCCCCcc-ccCchHhhcccCcccEEecCCCcccc--------CchhhhhhceeeEEEee
Confidence 6555 34443 4555555555555555 3331 233445555555555555542 122233333 555555
Q ss_pred CCcc--cCccccccccCCcceeEEeecccccccCCCCCCccccceeeeccccccccCcc-hhcccCcccEEEecccc---
Q 048430 205 GNNI--AGLIPSMIFNNSNMVAILLYGNHLSGHLPSSIYLPNLENLFLWKNNLSGIIPD-SICNASEATILELSSNL--- 278 (973)
Q Consensus 205 ~N~l--~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~l~~l~~L~~L~L~~N~--- 278 (973)
+|++ ++..|..+..+. ...+ .+++++|.+.+.+++ .+..+++|+.|++++|+
T Consensus 178 ~n~l~~~~~~~~~l~~l~---------------------~~~l-~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~ 235 (562)
T 3a79_B 178 LVSYHIKGGETESLQIPN---------------------TTVL-HLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENC 235 (562)
T ss_dssp ESSCCCCSSSCCEEEECC---------------------EEEE-EEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTH
T ss_pred cccccccccCcccccccC---------------------cceE-EEEecCccchhhhhhhcccccceEEEeccccccccc
Confidence 5555 444444333211 1112 456677777664443 45566777777777774
Q ss_pred --ccccCCCcccccccceEEEccCCcCCCCCCCcchhhhhhhccCCcCcEEEccCCCCCCCCCCcccccccccceeeccc
Q 048430 279 --FSGLVPNTFGNCRQLQILSLGDNQLTTGSSAQGQIFYSSLAKCRYLRVLVLDTNPLKGVIPNSIGNLSTSLENFYAGS 356 (973)
Q Consensus 279 --i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~l~~l~l~~ 356 (973)
+.+. ...|..+++|+.|+++++.+..... ...+. ....++|++|++++|.+.+.+|..+...
T Consensus 236 ~~l~~~-~~~l~~l~~L~~L~L~~~~l~~~~~---~~~~~-~~~~~~L~~L~l~~n~l~~~ip~~~~~~----------- 299 (562)
T 3a79_B 236 QRLMTF-LSELTRGPTLLNVTLQHIETTWKCS---VKLFQ-FFWPRPVEYLNIYNLTITERIDREEFTY----------- 299 (562)
T ss_dssp HHHHHH-HHHHHSCSSCEEEEEEEEEECHHHH---HHHHH-HHTTSSEEEEEEEEEEECSCCCCCCCCC-----------
T ss_pred chHHHH-HHHHhccCcceEEEecCCcCcHHHH---HHHHH-hhhcccccEEEEeccEeeccccchhhhc-----------
Confidence 2222 1245566677777776666543100 00011 1123366666666666665555443211
Q ss_pred CCccccCCCCCCCCCcccEEEeecCccccccC-cccCC---CCCCCEEEccCCcCCCCCchhhhccCcCCeeecCCcccc
Q 048430 357 SQLSGGIPVGFGNLSNLLVLSLVNNELAGAIP-TVLGK---LQKLQGLDLNSNKLKGFIPTDLCKLEKLNTLLSNNNALQ 432 (973)
Q Consensus 357 n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p-~~~~~---l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 432 (973)
....++.|+.++++.|.+ .+| ..+.. ..+|++|++++|.+.... ....+++|+.|++++|+++
T Consensus 300 ---------~~~~L~~L~~~~~~~~~~--~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~l~~n~l~ 366 (562)
T 3a79_B 300 ---------SETALKSLMIEHVKNQVF--LFSKEALYSVFAEMNIKMLSISDTPFIHMV--CPPSPSSFTFLNFTQNVFT 366 (562)
T ss_dssp ---------CSCSCCEEEEEEEEECCC--SSCHHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCC
T ss_pred ---------ccccchheehhhccccee--ecChhhhhhhhccCcceEEEccCCCccccc--CccCCCCceEEECCCCccc
Confidence 016677778888888877 333 23222 257999999999887432 1267889999999999999
Q ss_pred CcCcccccCcCCCCeeeccCCCCCCC--CcccccccccccEEEecCCcccCCcCc-CccCCCCCCeEEccCCcCcccCCc
Q 048430 433 GQIPTCLANLTSLRHLDFRSNSLNST--IPSTFWSLKYILAVDFSLNSLSGSLPL-NIGNLEALGGLNLTGNQLSGYIPS 509 (973)
Q Consensus 433 ~~~~~~~~~l~~L~~L~L~~N~l~~~--~p~~~~~l~~L~~L~ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~ 509 (973)
+..|..+.++++|++|++++|++++. +|..|..+++|+.|++++|++++.+|. .+..+++|+.|+|++|++++.+|.
T Consensus 367 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 446 (562)
T 3a79_B 367 DSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFR 446 (562)
T ss_dssp TTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGS
T ss_pred cchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhh
Confidence 88888999999999999999999863 356788999999999999999975555 488889999999999999877777
Q ss_pred ccccCCcCCEEEcccCccccCCCCCcccccccccccccccccCCCCCcc-ccccccccccccCCCcccccCCC
Q 048430 510 SIGNLKNLDWLALARNAFQGPIPQSFGSLISLQSLDLSGNNISGEIPKS-LEKLSRLVDFNVSFNGLEGEIPS 581 (973)
Q Consensus 510 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~l~ls~N~l~~~~p~ 581 (973)
.+. ++|+.|+|++|+++ .+|..+..+++|++|+|++|+|++ +|.. +..+++|+.|++++|+++|.+|.
T Consensus 447 ~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~-l~~~~~~~l~~L~~L~l~~N~~~c~c~~ 515 (562)
T 3a79_B 447 CLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKS-VPDGVFDRLTSLQYIWLHDNPWDCTCPG 515 (562)
T ss_dssp SCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCC-CCTTSTTTCTTCCCEECCSCCBCCCHHH
T ss_pred hhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCC-CCHHHHhcCCCCCEEEecCCCcCCCcch
Confidence 665 78999999999998 788777799999999999999994 5555 89999999999999999887763
No 37
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=3.8e-46 Score=402.40 Aligned_cols=249 Identities=21% Similarity=0.354 Sum_probs=189.2
Q ss_pred cCCCCCccccccCceEEEEEEe-CCCeEEEEEEEeccc-hhhHHHHHHHHHHHHhccCCceeEEEeeeecCC--------
Q 048430 680 NGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQE-DRALKSFDTECEVMRRIRHRNLIKIVSSCSNPG-------- 749 (973)
Q Consensus 680 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-------- 749 (973)
++|...+.||+|+||+||+|+. .+|+.||||+++... +...+.+.+|++++++++|||||++++++.+.+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 4588899999999999999985 479999999987554 344578999999999999999999999986433
Q ss_pred ----eeEEEEEecCCCCHHHHhhhCC--CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEee
Q 048430 750 ----FKALIMQYMPQGSLEKWLYSHN--YSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGD 823 (973)
Q Consensus 750 ----~~~lv~e~~~~gsL~~~l~~~~--~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~D 823 (973)
..|+|||||++|+|.+++.... ...++..++.++.||+.||+||| +++||||||||+|||++.++.+||+|
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH---~~~IiHRDlKp~NILl~~~~~vKl~D 161 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGD 161 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECC
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHH---HCcCccccCcHHHeEECCCCcEEEcc
Confidence 3689999999999999998754 23566778899999999999999 79999999999999999999999999
Q ss_pred cccccccCCCCCc-----------ccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHH
Q 048430 824 FGIAKLLDGVDPV-----------TQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLK 892 (973)
Q Consensus 824 fgla~~~~~~~~~-----------~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~ 892 (973)
||+|+........ ..+..+||+.|||||.+.+..++.++|||||||++|||++ ||..... ...
T Consensus 162 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~---~~~ 235 (299)
T 4g31_A 162 FGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQME---RVR 235 (299)
T ss_dssp CCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHH---HHH
T ss_pred CccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccH---HHH
Confidence 9999876432211 1234579999999999999999999999999999999996 7643111 111
Q ss_pred HHHHhhCCcchhhhcccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 893 QWVAESLPGAVTEVVDANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 893 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
. +...... ... +......+...+++.+||+.||++|||+.|+++|
T Consensus 236 ~-~~~~~~~-------------~~p------~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 280 (299)
T 4g31_A 236 T-LTDVRNL-------------KFP------PLFTQKYPCEYVMVQDMLSPSPMERPEAINIIEN 280 (299)
T ss_dssp H-HHHHHTT-------------CCC------HHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred H-HHHHhcC-------------CCC------CCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 1 1110000 000 1112334557789999999999999999999985
No 38
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=1.7e-43 Score=429.68 Aligned_cols=526 Identities=20% Similarity=0.164 Sum_probs=428.7
Q ss_pred cceEE----EEEeeCC---------CCcEEEEecCCCCCCCcCCCCCCCCCCCcEEEecCCCCCCCCCcccccccCCcEE
Q 048430 32 VCNWV----GVTCSIR---------HGRVAALSLPNLSLGGTLPPHVGNLSFLVSLNISGNSFYDTLPNELWHMRRLKII 98 (973)
Q Consensus 32 ~c~w~----gv~C~~~---------~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L 98 (973)
.|.|. -|.|... +..++.|||++|.+++..|.+++++++|++|+|++|+|.+..|.+|+++++|++|
T Consensus 26 ~c~~~~~~~~~~c~~~~l~~vP~~lp~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L 105 (635)
T 4g8a_A 26 PCVEVVPNITYQCMELNFYKIPDNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTL 105 (635)
T ss_dssp CSEEEETTTEEECTTSCCSSCCSSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEE
T ss_pred CccccCCCCEEECCCCCcCccCCCCCcCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEE
Confidence 46555 4788642 2479999999999997666789999999999999999987778889999999999
Q ss_pred EccCCCCCCCCCccccCCCCCccEEEeeCcccCCCCCccccCCCCCCeEEccCccccccCCccccCCCCCccEEEccccc
Q 048430 99 DFSSNSLSGSLPGDMCNSFTQLESFDVSSNKITGEFPSAIVNISSLKSIRLDNNSLSGSFPTDLCTRLPSLVQLRLLGNN 178 (973)
Q Consensus 99 ~Ls~n~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~L~~N~ 178 (973)
+|++|+|+ .+|.+.|.++++|++|+|++|++++..+..|+++++|++|+|++|++++.-....+..+++|++|+|++|+
T Consensus 106 ~Ls~N~l~-~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~ 184 (635)
T 4g8a_A 106 ILTGNPIQ-SLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNK 184 (635)
T ss_dssp ECTTCCCC-EECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSC
T ss_pred EccCCcCC-CCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCcc
Confidence 99999998 78888899999999999999999987777899999999999999999843234556789999999999999
Q ss_pred ccccCCCCCCCccccCCCCc----cEEEecCCcccCccccccccCCcceeEEeecccccccCCCC--CCccccceeeecc
Q 048430 179 ITGRIPNREIPNEIGNLHNL----KILDLGGNNIAGLIPSMIFNNSNMVAILLYGNHLSGHLPSS--IYLPNLENLFLWK 252 (973)
Q Consensus 179 l~~~~~~~~~p~~l~~l~~L----~~L~L~~N~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~--~~l~~L~~L~L~~ 252 (973)
|++.. |..|..+.++ ..++++.|.++...+. ......+..+++.+|......... ..+..++...+..
T Consensus 185 l~~~~-----~~~l~~L~~l~~~~~~~~ls~n~l~~i~~~-~~~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~ 258 (635)
T 4g8a_A 185 IQSIY-----CTDLRVLHQMPLLNLSLDLSLNPMNFIQPG-AFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVL 258 (635)
T ss_dssp CCEEC-----GGGGHHHHTCTTCCCEEECTTCCCCEECTT-TTTTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEE
T ss_pred ccccc-----cccccchhhhhhhhhhhhcccCcccccCcc-cccchhhhhhhhhcccccccccchhhcCCcccccccccc
Confidence 98643 4556655554 4789999999865554 445567788999988665432211 1356666665543
Q ss_pred cc------ccccCcchhcccCcccEEEecccccc---ccCCCcccccccceEEEccCCcCCCCCCCcchhhhhhhccCCc
Q 048430 253 NN------LSGIIPDSICNASEATILELSSNLFS---GLVPNTFGNCRQLQILSLGDNQLTTGSSAQGQIFYSSLAKCRY 323 (973)
Q Consensus 253 N~------l~~~~~~~l~~l~~L~~L~L~~N~i~---~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~ 323 (973)
+. +.......+..+..+..+++..+... ...+..+..+.+++.+.+.+|.+... ..+.....
T Consensus 259 ~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~---------~~~~~~~~ 329 (635)
T 4g8a_A 259 GEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLVSVTIERV---------KDFSYNFG 329 (635)
T ss_dssp ECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEESCEEEEC---------GGGGSCCC
T ss_pred cccccccccccccccccccccchhhhhhhhhhhcccccchhhhhhhhcccccccccccccccc---------cccccchh
Confidence 32 33334455666777777777665543 22345567778889999988887642 23566778
Q ss_pred CcEEEccCCCCCCCCCCcccccccccceeecccCCccccCCCCCCCCCcccEEEeecCcccc--ccCcccCCCCCCCEEE
Q 048430 324 LRVLVLDTNPLKGVIPNSIGNLSTSLENFYAGSSQLSGGIPVGFGNLSNLLVLSLVNNELAG--AIPTVLGKLQKLQGLD 401 (973)
Q Consensus 324 L~~L~L~~N~l~~~~p~~~~~l~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~--~~p~~~~~l~~L~~L~ 401 (973)
|+.|++.+|.+.+..+..+ ..++.+.+..|..... ..+..+++|+.|++++|.+.. ..+..+..+.+|+.|+
T Consensus 330 L~~L~l~~~~~~~~~~~~l----~~L~~l~l~~n~~~~~--~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~ 403 (635)
T 4g8a_A 330 WQHLELVNCKFGQFPTLKL----KSLKRLTFTSNKGGNA--FSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLD 403 (635)
T ss_dssp CSEEEEESCEESSCCCCBC----TTCCEEEEESCCSCCB--CCCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEE
T ss_pred hhhhhcccccccCcCcccc----hhhhhcccccccCCCC--cccccccccccchhhccccccccccccchhhhhhhhhhh
Confidence 8999999998886655443 4566777777776543 345678999999999999863 4566778889999999
Q ss_pred ccCCcCCCCCchhhhccCcCCeeecCCccccCcCc-ccccCcCCCCeeeccCCCCCCCCcccccccccccEEEecCCccc
Q 048430 402 LNSNKLKGFIPTDLCKLEKLNTLLSNNNALQGQIP-TCLANLTSLRHLDFRSNSLNSTIPSTFWSLKYILAVDFSLNSLS 480 (973)
Q Consensus 402 Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~ 480 (973)
++.|.+. ..+..+..+++|+.+++..|......+ ..+..+++++.++++.|.+.+..+..+..++.++.|++++|++.
T Consensus 404 ~~~~~~~-~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~ 482 (635)
T 4g8a_A 404 LSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQ 482 (635)
T ss_dssp CCSCSEE-EECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEG
T ss_pred ccccccc-cccccccccccccchhhhhccccccccccccccccccccccccccccccccccccccchhhhhhhhhhcccc
Confidence 9999988 456678899999999999988876654 46788999999999999999999999999999999999999854
Q ss_pred -CCcCcCccCCCCCCeEEccCCcCcccCCcccccCCcCCEEEcccCccccCCCCCcccccccccccccccccCCCCCccc
Q 048430 481 -GSLPLNIGNLEALGGLNLTGNQLSGYIPSSIGNLKNLDWLALARNAFQGPIPQSFGSLISLQSLDLSGNNISGEIPKSL 559 (973)
Q Consensus 481 -~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 559 (973)
+..|..|..+++|+.|+|++|+|++..|..|+++++|+.|+|++|+|++..|..|..+++|++|||++|+|++.+|..+
T Consensus 483 ~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l 562 (635)
T 4g8a_A 483 ENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQEL 562 (635)
T ss_dssp GGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCT
T ss_pred cccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHH
Confidence 4578899999999999999999999899999999999999999999999889999999999999999999999999999
Q ss_pred ccc-ccccccccCCCcccccCC
Q 048430 560 EKL-SRLVDFNVSFNGLEGEIP 580 (973)
Q Consensus 560 ~~l-~~L~~l~ls~N~l~~~~p 580 (973)
..+ ++|+.|+|++|++.+...
T Consensus 563 ~~l~~~L~~L~L~~Np~~C~C~ 584 (635)
T 4g8a_A 563 QHFPSSLAFLNLTQNDFACTCE 584 (635)
T ss_dssp TCCCTTCCEEECTTCCBCCSGG
T ss_pred HhhhCcCCEEEeeCCCCcccCC
Confidence 998 689999999999998654
No 39
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=9.8e-43 Score=415.25 Aligned_cols=437 Identities=20% Similarity=0.177 Sum_probs=311.2
Q ss_pred CcEEEEecCCCCCCCcCCCCCCCCCCCcEEEecCCCCCCCCCcccccccCCcEEEccCCCCCCCCCccccCCCCCccEEE
Q 048430 45 GRVAALSLPNLSLGGTLPPHVGNLSFLVSLNISGNSFYDTLPNELWHMRRLKIIDFSSNSLSGSLPGDMCNSFTQLESFD 124 (973)
Q Consensus 45 ~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~~l~~L~~L~ 124 (973)
.+++.|+++++.+++..|..++++++|++|+|++|++.+..|..|+++++|++|||++|+++ .+|.. .+++|++|+
T Consensus 52 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~---~l~~L~~L~ 127 (562)
T 3a79_B 52 PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC---PMASLRHLD 127 (562)
T ss_dssp TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC---CCTTCSEEE
T ss_pred CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc---ccccCCEEE
Confidence 57999999999999877789999999999999999999888999999999999999999998 78876 799999999
Q ss_pred eeCcccCC-CCCccccCCCCCCeEEccCccccccCCccccCCCCCc--cEEEcccccc--cccCCCCCCCccccCCC--C
Q 048430 125 VSSNKITG-EFPSAIVNISSLKSIRLDNNSLSGSFPTDLCTRLPSL--VQLRLLGNNI--TGRIPNREIPNEIGNLH--N 197 (973)
Q Consensus 125 Ls~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L--~~L~L~~N~l--~~~~~~~~~p~~l~~l~--~ 197 (973)
|++|++++ .+|..|+++++|++|+|++|++++ . .+..+++| ++|+|++|++ ++ ..|..+..+. .
T Consensus 128 Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~-~---~~~~l~~L~L~~L~L~~n~l~~~~-----~~~~~l~~l~~~~ 198 (562)
T 3a79_B 128 LSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQ-L---DLLPVAHLHLSCILLDLVSYHIKG-----GETESLQIPNTTV 198 (562)
T ss_dssp CCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCT-T---TTGGGTTSCEEEEEEEESSCCCCS-----SSCCEEEECCEEE
T ss_pred CCCCCccccCchHhhcccCcccEEecCCCcccc-C---chhhhhhceeeEEEeecccccccc-----cCcccccccCcce
Confidence 99999997 456899999999999999999984 2 23455566 9999999999 64 3456777654 3
Q ss_pred ccEEEecCCcccCcccc-ccccCCcceeEEeeccc-----ccccCCCCCCccccceeeeccccccccC----cchhcccC
Q 048430 198 LKILDLGGNNIAGLIPS-MIFNNSNMVAILLYGNH-----LSGHLPSSIYLPNLENLFLWKNNLSGII----PDSICNAS 267 (973)
Q Consensus 198 L~~L~L~~N~l~~~~~~-~~~~~~~L~~L~l~~n~-----l~~~~~~~~~l~~L~~L~L~~N~l~~~~----~~~l~~l~ 267 (973)
| .+++++|.+.+.++. .+..+++|+.+++++|. +.+.++....+++|+.|+++++.+.+.. +..+ ..+
T Consensus 199 l-~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~-~~~ 276 (562)
T 3a79_B 199 L-HLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFF-WPR 276 (562)
T ss_dssp E-EEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHH-TTS
T ss_pred E-EEEecCccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcCcHHHHHHHHHhh-hcc
Confidence 3 668899999876554 45567888888888884 3333333345677888888777765421 1111 234
Q ss_pred cccEEEeccccccccCCCcc-----cccccceEEEccCCcCCCCCCCcchhhhhhhccCCcCcEEEccCCCCCCCCCCcc
Q 048430 268 EATILELSSNLFSGLVPNTF-----GNCRQLQILSLGDNQLTTGSSAQGQIFYSSLAKCRYLRVLVLDTNPLKGVIPNSI 342 (973)
Q Consensus 268 ~L~~L~L~~N~i~~~~~~~~-----~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~ 342 (973)
+|++|++++|.+++.+|..+ ..++.|+.++++.|.+ .++. .....+....+|+.|+
T Consensus 277 ~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~-~~p~----~~~~~~~~~~~L~~L~-------------- 337 (562)
T 3a79_B 277 PVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVF-LFSK----EALYSVFAEMNIKMLS-------------- 337 (562)
T ss_dssp SEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCC-SSCH----HHHHHHHHTCCCSEEE--------------
T ss_pred cccEEEEeccEeeccccchhhhcccccchheehhhccccee-ecCh----hhhhhhhccCcceEEE--------------
Confidence 78888888888887777665 6666666666666655 2211 0111111123344444
Q ss_pred cccccccceeecccCCccccCCCCCCCCCcccEEEeecCccccccCcccCCCCCCCEEEccCCcCCCCCchhhhccCcCC
Q 048430 343 GNLSTSLENFYAGSSQLSGGIPVGFGNLSNLLVLSLVNNELAGAIPTVLGKLQKLQGLDLNSNKLKGFIPTDLCKLEKLN 422 (973)
Q Consensus 343 ~~l~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 422 (973)
+++|.+.... .+..+++|++|++++|++++.+|..+.++++|+
T Consensus 338 -----------------------------------l~~n~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 380 (562)
T 3a79_B 338 -----------------------------------ISDTPFIHMV--CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQ 380 (562)
T ss_dssp -----------------------------------EESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCC
T ss_pred -----------------------------------ccCCCccccc--CccCCCCceEEECCCCccccchhhhhcccCCCC
Confidence 4444443111 113444555555555555544555555555555
Q ss_pred eeecCCccccCc--CcccccCcCCCCeeeccCCCCCCCCc-ccccccccccEEEecCCcccCCcCcCccCCCCCCeEEcc
Q 048430 423 TLLSNNNALQGQ--IPTCLANLTSLRHLDFRSNSLNSTIP-STFWSLKYILAVDFSLNSLSGSLPLNIGNLEALGGLNLT 499 (973)
Q Consensus 423 ~L~l~~N~l~~~--~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls 499 (973)
.|++++|++++. +|..+.++++|++|++++|++++.+| ..+..+++|+.|++++|++++..|..+. ++|+.|+|+
T Consensus 381 ~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~ 458 (562)
T 3a79_B 381 TLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLH 458 (562)
T ss_dssp EEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECC
T ss_pred EEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECC
Confidence 555555555542 23455666666677777776665333 3466667777777777777766665554 688899999
Q ss_pred CCcCcccCCcccccCCcCCEEEcccCccccCCCCC-cccccccccccccccccCCCCC
Q 048430 500 GNQLSGYIPSSIGNLKNLDWLALARNAFQGPIPQS-FGSLISLQSLDLSGNNISGEIP 556 (973)
Q Consensus 500 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~Ls~N~l~~~~p 556 (973)
+|+|+ .+|..+..+++|+.|+|++|+|+ .+|.. |..+++|+.|+|++|++++..|
T Consensus 459 ~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c~c~ 514 (562)
T 3a79_B 459 NNRIM-SIPKDVTHLQALQELNVASNQLK-SVPDGVFDRLTSLQYIWLHDNPWDCTCP 514 (562)
T ss_dssp SSCCC-CCCTTTTSSCCCSEEECCSSCCC-CCCTTSTTTCTTCCCEECCSCCBCCCHH
T ss_pred CCcCc-ccChhhcCCCCCCEEECCCCCCC-CCCHHHHhcCCCCCEEEecCCCcCCCcc
Confidence 99998 67777778999999999999999 45555 8999999999999999987655
No 40
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=6.4e-44 Score=399.83 Aligned_cols=272 Identities=23% Similarity=0.241 Sum_probs=203.1
Q ss_pred cCCCCCccccccCceEEEEEEe-CCCeEEEEEEEeccc--hhhHHHHHHHHHHHHhccCCceeEEEeeeec------CCe
Q 048430 680 NGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQE--DRALKSFDTECEVMRRIRHRNLIKIVSSCSN------PGF 750 (973)
Q Consensus 680 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~------~~~ 750 (973)
++|...+.||+|+||+||+|+. .+|+.||||+++... ....+.+.+|+++|++++|||||++++++.. .+.
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 5788999999999999999985 579999999996542 2345678899999999999999999998753 467
Q ss_pred eEEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeeccccccc
Q 048430 751 KALIMQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLL 830 (973)
Q Consensus 751 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~ 830 (973)
.|+|||||+ |+|.+++...+ .+++.++..++.||+.||+||| +++||||||||+|||++.++.+||+|||+|+..
T Consensus 134 ~~ivmE~~~-g~L~~~i~~~~-~l~~~~~~~~~~qil~al~ylH---~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~ 208 (398)
T 4b99_A 134 VYVVLDLME-SDLHQIIHSSQ-PLTLEHVRYFLYQLLRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGL 208 (398)
T ss_dssp EEEEEECCS-EEHHHHHTSSS-CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTCCEEECCCTTCBCC
T ss_pred EEEEEeCCC-CCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCcCcCCCcCccccccCCCCCEEEeecceeeec
Confidence 899999996 68999998765 7999999999999999999999 899999999999999999999999999999876
Q ss_pred CCCC---CcccccccccccccCccCCCCC-CCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhC--Ccchh
Q 048430 831 DGVD---PVTQTMTLATIGYMAPEYGSEG-IVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESL--PGAVT 904 (973)
Q Consensus 831 ~~~~---~~~~~~~~~~~~y~aPE~~~~~-~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~--~~~~~ 904 (973)
.... .......+||+.|||||.+.+. .++.++||||+||++|||++|+.||.+....+ .+........ +....
T Consensus 209 ~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~-~l~~I~~~~g~p~~~~~ 287 (398)
T 4b99_A 209 CTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVH-QLQLIMMVLGTPSPAVI 287 (398)
T ss_dssp -------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHH-HHHHHHHHHCCCCGGGT
T ss_pred ccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHH-HHHHHHHhcCCCChHHh
Confidence 4321 1223456899999999987664 57999999999999999999999996532111 1111111111 11000
Q ss_pred hhccc-----ccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 905 EVVDA-----NLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 905 ~~~d~-----~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
..+.. ....................++++.+|+.+||+.||++|||++|+++|
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 345 (398)
T 4b99_A 288 QAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH 345 (398)
T ss_dssp C-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred hhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 00000 000000000000000111245678999999999999999999999986
No 41
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=7.2e-44 Score=395.37 Aligned_cols=272 Identities=21% Similarity=0.267 Sum_probs=201.7
Q ss_pred HHHhcCCCCCccccccCceEEEEEEe----CCCeEEEEEEEeccchhhHHHHHHHHHHHHhc-cCCceeEEEeeeecCCe
Q 048430 676 QQATNGFGESNLLGSGSFDNVYKATL----ANGVSVAVKVFNLQEDRALKSFDTECEVMRRI-RHRNLIKIVSSCSNPGF 750 (973)
Q Consensus 676 ~~~~~~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~ 750 (973)
....++|...++||+|+||+||+|+. .+++.||||.+..... ...+.+|+++++.+ +||||+++++++.+.++
T Consensus 17 p~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~--~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~ 94 (361)
T 4f9c_A 17 PQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSH--PIRIAAELQCLTVAGGQDNVMGVKYCFRKNDH 94 (361)
T ss_dssp GGGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTSC--HHHHHHHHHHHHHTCSBTTBCCCSEEEEETTE
T ss_pred CCccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccccC--HHHHHHHHHHHHHhcCCCCCceEEEEEEECCE
Confidence 34567899999999999999999974 3578999998865433 35688999999998 69999999999999999
Q ss_pred eEEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCC-CcEEEeecccccc
Q 048430 751 KALIMQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDD-MVAHLGDFGIAKL 829 (973)
Q Consensus 751 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~-~~~kl~Dfgla~~ 829 (973)
.|+||||+++|+|.+++. .+++.+++.++.|++.||+||| +++||||||||+|||++.+ +.+||+|||+|+.
T Consensus 95 ~~lvmE~~~g~~L~~~~~----~l~~~~~~~~~~qll~al~ylH---~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~ 167 (361)
T 4f9c_A 95 VVIAMPYLEHESFLDILN----SLSFQEVREYMLNLFKALKRIH---QFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQG 167 (361)
T ss_dssp EEEEEECCCCCCHHHHHT----TCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred EEEEEeCCCcccHHHHHc----CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCcCCHHHeEEeCCCCeEEECcCCCCcc
Confidence 999999999999999984 4899999999999999999999 8999999999999999877 7999999999986
Q ss_pred cCCCCC---------------------------cccccccccccccCccCCCCC-CCCcchhHHHHHHHHHHHHhCCCCC
Q 048430 830 LDGVDP---------------------------VTQTMTLATIGYMAPEYGSEG-IVSISGDVYSFGILMMETFTRRKPT 881 (973)
Q Consensus 830 ~~~~~~---------------------------~~~~~~~~~~~y~aPE~~~~~-~~~~~sDvws~Gvvl~elltg~~p~ 881 (973)
...... ......+||+.|||||.+.+. .++.++||||+||++|||++|+.||
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf 247 (361)
T 4f9c_A 168 THDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPF 247 (361)
T ss_dssp CTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSS
T ss_pred cCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCC
Confidence 533211 112234799999999987765 5899999999999999999999998
Q ss_pred CccccCcccHHHHHHhhCCc----------------------chhhhcccccCCCCc---------hhhhhhHHhHHHHH
Q 048430 882 NEMFTGEMSLKQWVAESLPG----------------------AVTEVVDANLLSRED---------EEDADDFATKKTCI 930 (973)
Q Consensus 882 ~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~d~~l~~~~~---------~~~~~~~~~~~~~~ 930 (973)
.........+.......... ......+. +..... .............+
T Consensus 248 ~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~-~~~~~~~~p~~~~~~~~~~~~~~~~~~is 326 (361)
T 4f9c_A 248 YKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCER-LRGMDSSTPKLTSDIQGHATNLEGWNEVP 326 (361)
T ss_dssp SCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHH-HC----------------------CTTCC
T ss_pred CCCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHh-hccccccccccccccccccccccccccCC
Confidence 54322211122211110000 00000000 000000 00000001112345
Q ss_pred HHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 931 SYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 931 ~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
+++.+|+.+|++.||++|||++|+++|
T Consensus 327 ~~a~DLl~~lL~~dP~~R~ta~eaL~H 353 (361)
T 4f9c_A 327 DEAYDLLDKLLDLNPASRITAEEALLH 353 (361)
T ss_dssp HHHHHHHHHHTCSCTTTSCCHHHHHTS
T ss_pred HHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 678999999999999999999999986
No 42
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=1.5e-42 Score=403.12 Aligned_cols=392 Identities=20% Similarity=0.198 Sum_probs=293.1
Q ss_pred cEEEccCCCCCCCCCccccCCCCCccEEEeeCcccCCCCCccccCCCCCCeEEccCccccccCCccccCCCCCccEEEcc
Q 048430 96 KIIDFSSNSLSGSLPGDMCNSFTQLESFDVSSNKITGEFPSAIVNISSLKSIRLDNNSLSGSFPTDLCTRLPSLVQLRLL 175 (973)
Q Consensus 96 ~~L~Ls~n~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~L~ 175 (973)
+.++.+++.+. .+|. + .++|++|||++|.+++..|..|+++++|++|+|++|.+.+.++...|..+++|++|+|+
T Consensus 13 ~~~~c~~~~l~-~lp~-l---~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls 87 (455)
T 3v47_A 13 YNAICINRGLH-QVPE-L---PAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLD 87 (455)
T ss_dssp TEEECCSSCCS-SCCC-C---CTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECT
T ss_pred cccCcCCCCcc-cCCC-C---CCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCC
Confidence 45677777776 6775 2 36788888888888877788888888888888888888777877777888888888888
Q ss_pred cccccccCCCCCCCccccCCCCccEEEecCCcccCccccc--cccCCcceeEEeecccccccCCCCCCccccceeeeccc
Q 048430 176 GNNITGRIPNREIPNEIGNLHNLKILDLGGNNIAGLIPSM--IFNNSNMVAILLYGNHLSGHLPSSIYLPNLENLFLWKN 253 (973)
Q Consensus 176 ~N~l~~~~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~--~~~~~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L~~N 253 (973)
+|++++. .|..|+++++|++|+|++|++++.++.. +.. +++|++|+|++|
T Consensus 88 ~n~l~~~-----~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~-----------------------l~~L~~L~L~~n 139 (455)
T 3v47_A 88 YNQFLQL-----ETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKP-----------------------LTSLEMLVLRDN 139 (455)
T ss_dssp TCTTCEE-----CTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTT-----------------------CTTCCEEECCSS
T ss_pred CCccCcc-----ChhhccCcccCCEEeCCCCCCCccccCcccccC-----------------------cccCCEEECCCC
Confidence 8888743 3567888888888888888887644433 443 677777777778
Q ss_pred cccccCcch-hcccCcccEEEeccccccccCCCccccc--ccceEEEccCCcCCCCCCCcchhhhhhhccCCcCcEEEcc
Q 048430 254 NLSGIIPDS-ICNASEATILELSSNLFSGLVPNTFGNC--RQLQILSLGDNQLTTGSSAQGQIFYSSLAKCRYLRVLVLD 330 (973)
Q Consensus 254 ~l~~~~~~~-l~~l~~L~~L~L~~N~i~~~~~~~~~~l--~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~L~~L~L~ 330 (973)
++++..|.. +..+++|++|++++|.+++..+..+..+ .+|+.|++++|.+...+...
T Consensus 140 ~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~-------------------- 199 (455)
T 3v47_A 140 NIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYW-------------------- 199 (455)
T ss_dssp BCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTC--------------------
T ss_pred ccCccCcccccCCCCcccEEeCCCCcccccChhhhhccccccccccccccCcccccchhh--------------------
Confidence 777776665 7778888888888888887777777665 56777777777766533211
Q ss_pred CCCCCCCCCCcccccccccceeecccCCccccCCCCCCCCCcccEEEeecCccccccCcccCCC---CCCCEEEccCCcC
Q 048430 331 TNPLKGVIPNSIGNLSTSLENFYAGSSQLSGGIPVGFGNLSNLLVLSLVNNELAGAIPTVLGKL---QKLQGLDLNSNKL 407 (973)
Q Consensus 331 ~N~l~~~~p~~~~~l~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l---~~L~~L~Ls~N~l 407 (973)
+. ......+..+++|++|++++|++++..|..+... ++|+.|++++|.+
T Consensus 200 -----------~~-----------------~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~ 251 (455)
T 3v47_A 200 -----------LG-----------------WEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYN 251 (455)
T ss_dssp -----------TT-----------------HHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTT
T ss_pred -----------cc-----------------ccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccc
Confidence 00 0011123345667777777777766666555433 6777777777766
Q ss_pred CCCCchhhhccCcCCeeecCCccccCcCcccccC--cCCCCeeeccCCCCCCCCcccccccccccEEEecCCcccCCcCc
Q 048430 408 KGFIPTDLCKLEKLNTLLSNNNALQGQIPTCLAN--LTSLRHLDFRSNSLNSTIPSTFWSLKYILAVDFSLNSLSGSLPL 485 (973)
Q Consensus 408 ~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~--l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~ 485 (973)
.+... ..+.+....+..+.. .++|+.|++++|++++..|..|..+++|+.|++++|++++..|.
T Consensus 252 ~~~~~--------------~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~ 317 (455)
T 3v47_A 252 MGSSF--------------GHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDN 317 (455)
T ss_dssp TSCCT--------------TCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTT
T ss_pred ccccc--------------chhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChh
Confidence 53211 112222222223332 36788888888888888888888888888888888888877788
Q ss_pred CccCCCCCCeEEccCCcCcccCCcccccCCcCCEEEcccCccccCCCCCcccccccccccccccccCCCCCccccccccc
Q 048430 486 NIGNLEALGGLNLTGNQLSGYIPSSIGNLKNLDWLALARNAFQGPIPQSFGSLISLQSLDLSGNNISGEIPKSLEKLSRL 565 (973)
Q Consensus 486 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 565 (973)
.|+++++|+.|+|++|++++..|..|+.+++|+.|+|++|++++..|..|..+++|++|+|++|+|++..+..+..+++|
T Consensus 318 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 397 (455)
T 3v47_A 318 AFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSL 397 (455)
T ss_dssp TTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTC
T ss_pred HhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcc
Confidence 88889999999999999987778888999999999999999998888899999999999999999998777778899999
Q ss_pred cccccCCCcccccCCCC
Q 048430 566 VDFNVSFNGLEGEIPSG 582 (973)
Q Consensus 566 ~~l~ls~N~l~~~~p~~ 582 (973)
+.|++++|+++|.+|..
T Consensus 398 ~~L~l~~N~l~~~~~~~ 414 (455)
T 3v47_A 398 QKIWLHTNPWDCSCPRI 414 (455)
T ss_dssp CEEECCSSCBCCCTTTT
T ss_pred cEEEccCCCcccCCCcc
Confidence 99999999999988854
No 43
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=6.1e-42 Score=397.97 Aligned_cols=392 Identities=19% Similarity=0.222 Sum_probs=261.4
Q ss_pred CCcceEEE--EEeeCCCCcEEEEecCCCCCCCcCCCCCCCCCCCcEEEecCCCCCCCCCcccccccCCcEEEccCCCCCC
Q 048430 30 ASVCNWVG--VTCSIRHGRVAALSLPNLSLGGTLPPHVGNLSFLVSLNISGNSFYDTLPNELWHMRRLKIIDFSSNSLSG 107 (973)
Q Consensus 30 ~~~c~w~g--v~C~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~ 107 (973)
.+.|.|.| |.|+. .+++ .+|. + .++|++|+|++|.+.+..|..|+++++|++|+|++|.+.+
T Consensus 5 ~~~c~~~~~~~~c~~------------~~l~-~lp~-l--~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~ 68 (455)
T 3v47_A 5 TSECSVIGYNAICIN------------RGLH-QVPE-L--PAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGL 68 (455)
T ss_dssp --CCEEETTEEECCS------------SCCS-SCCC-C--CTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTC
T ss_pred cceeEEEccccCcCC------------CCcc-cCCC-C--CCccCEEEecCCccCcCChhHhccCccccEEECcCCcccc
Confidence 45577776 77754 2333 5555 2 2789999999999988889999999999999999999988
Q ss_pred CCCccccCCCCCccEEEeeCcccCCCCCccccCCCCCCeEEccCccccccCC-ccccCCCCCccEEEcccccccccCCCC
Q 048430 108 SLPGDMCNSFTQLESFDVSSNKITGEFPSAIVNISSLKSIRLDNNSLSGSFP-TDLCTRLPSLVQLRLLGNNITGRIPNR 186 (973)
Q Consensus 108 ~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip-~~~~~~l~~L~~L~L~~N~l~~~~~~~ 186 (973)
.+|...|..+++|++|+|++|++++..|..|+++++|++|+|++|++++.+| ...+..+++|++|+|++|++++.
T Consensus 69 ~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~---- 144 (455)
T 3v47_A 69 VIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKI---- 144 (455)
T ss_dssp EECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSC----
T ss_pred eECcccccccccCCEEeCCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCcc----
Confidence 8888888999999999999999998889999999999999999999986554 34567888999999999998743
Q ss_pred CCCcc-ccCCCCccEEEecCCcccCccccccccCCcceeEEeecccccccCCCCCCccccceeeeccccccccCcch---
Q 048430 187 EIPNE-IGNLHNLKILDLGGNNIAGLIPSMIFNNSNMVAILLYGNHLSGHLPSSIYLPNLENLFLWKNNLSGIIPDS--- 262 (973)
Q Consensus 187 ~~p~~-l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~--- 262 (973)
.|.. ++++++|++|+|++|++++..+..+..+. ..+|+.|++++|.+.+..+..
T Consensus 145 -~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~---------------------~~~L~~L~l~~n~l~~~~~~~~~~ 202 (455)
T 3v47_A 145 -QPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQ---------------------GKHFTLLRLSSITLQDMNEYWLGW 202 (455)
T ss_dssp -CCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGT---------------------TCEEEEEECTTCBCTTCSTTCTTH
T ss_pred -CcccccCCCCcccEEeCCCCcccccChhhhhccc---------------------cccccccccccCcccccchhhccc
Confidence 2444 78888899999999988887777665531 134555555555555433222
Q ss_pred -----hcccCcccEEEeccccccccCCCccccc---ccceEEEccCCcCCCCCCCcchhhhhhhccCCcCcEEEccCCCC
Q 048430 263 -----ICNASEATILELSSNLFSGLVPNTFGNC---RQLQILSLGDNQLTTGSSAQGQIFYSSLAKCRYLRVLVLDTNPL 334 (973)
Q Consensus 263 -----l~~l~~L~~L~L~~N~i~~~~~~~~~~l---~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l 334 (973)
+..+++|++|++++|++++..|..+... ++|+.|++++|.+..
T Consensus 203 ~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~----------------------------- 253 (455)
T 3v47_A 203 EKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMG----------------------------- 253 (455)
T ss_dssp HHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTS-----------------------------
T ss_pred cccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccc-----------------------------
Confidence 1233445555555555544444333322 444444444444322
Q ss_pred CCCCCCcccccccccceeecccCCccccCCCCCCC--CCcccEEEeecCccccccCcccCCCCCCCEEEccCCcCCCCCc
Q 048430 335 KGVIPNSIGNLSTSLENFYAGSSQLSGGIPVGFGN--LSNLLVLSLVNNELAGAIPTVLGKLQKLQGLDLNSNKLKGFIP 412 (973)
Q Consensus 335 ~~~~p~~~~~l~~~l~~l~l~~n~l~~~~p~~~~~--l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~ 412 (973)
.... .+.+.+..+..+.. .++|+.|++++|.+++..|..|
T Consensus 254 --~~~~---------------~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~--------------------- 295 (455)
T 3v47_A 254 --SSFG---------------HTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVF--------------------- 295 (455)
T ss_dssp --CCTT---------------CCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTT---------------------
T ss_pred --cccc---------------hhhhccCcccccccccccCceEEEecCccccccchhhc---------------------
Confidence 1000 00111111111111 2344455555555444444444
Q ss_pred hhhhccCcCCeeecCCccccCcCcccccCcCCCCeeeccCCCCCCCCcccccccccccEEEecCCcccCCcCcCccCCCC
Q 048430 413 TDLCKLEKLNTLLSNNNALQGQIPTCLANLTSLRHLDFRSNSLNSTIPSTFWSLKYILAVDFSLNSLSGSLPLNIGNLEA 492 (973)
Q Consensus 413 ~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~ 492 (973)
..+++|+.|++++|++++..|..|.++++|++|+|++|++++..|..|..+++|+.|++++|++++..|..+..+++
T Consensus 296 ---~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 372 (455)
T 3v47_A 296 ---SHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPN 372 (455)
T ss_dssp ---TTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTT
T ss_pred ---ccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhcccccc
Confidence 44444555555555554444555555666666666666666555666666666667777777776666777888888
Q ss_pred CCeEEccCCcCcccCCcccccCCcCCEEEcccCccccCCCC
Q 048430 493 LGGLNLTGNQLSGYIPSSIGNLKNLDWLALARNAFQGPIPQ 533 (973)
Q Consensus 493 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 533 (973)
|+.|+|++|++++..+..|..+++|+.|+|++|++++..|.
T Consensus 373 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 413 (455)
T 3v47_A 373 LKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 413 (455)
T ss_dssp CCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred ccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCCc
Confidence 88888888888876666778889999999999999877763
No 44
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=1.2e-42 Score=400.43 Aligned_cols=388 Identities=24% Similarity=0.281 Sum_probs=165.7
Q ss_pred CCCCcEEEecCCCCCCCCCcccccccCCcEEEccCCCCCCCCCccccCCCCC-------------ccEEEeeCcccCCCC
Q 048430 68 LSFLVSLNISGNSFYDTLPNELWHMRRLKIIDFSSNSLSGSLPGDMCNSFTQ-------------LESFDVSSNKITGEF 134 (973)
Q Consensus 68 l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~~l~~-------------L~~L~Ls~N~l~~~~ 134 (973)
.++|++|++++|++ |.+|++++++++|++|++++|.+.|.+|..+ +.+++ |++|++++|.+++ +
T Consensus 10 ~~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~-~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~-l 86 (454)
T 1jl5_A 10 NTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGN-GEQREMAVSRLRDCLDRQAHELELNNLGLSS-L 86 (454)
T ss_dssp -------------------------CCHHHHHHHHHHHHHTSCTTS-CCCHHHHHHHHHHHHHHTCSEEECTTSCCSC-C
T ss_pred cccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCccc-ccchhcchhhhhhhhccCCCEEEecCCcccc-C
Confidence 34455555555555 4555555555555555555555544444433 33443 4666666666663 3
Q ss_pred CccccCCCCCCeEEccCccccccCCccccCCCCCccEEEcccccccccCCCCCCCccccCCCCccEEEecCCcccCcccc
Q 048430 135 PSAIVNISSLKSIRLDNNSLSGSFPTDLCTRLPSLVQLRLLGNNITGRIPNREIPNEIGNLHNLKILDLGGNNIAGLIPS 214 (973)
Q Consensus 135 p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~ 214 (973)
|.. .++|++|++++|.+++ +|.. +++|++|++++|++++ +|.. .++|++|++++|++++ +|
T Consensus 87 p~~---~~~L~~L~l~~n~l~~-lp~~----~~~L~~L~l~~n~l~~------l~~~---~~~L~~L~L~~n~l~~-lp- 147 (454)
T 1jl5_A 87 PEL---PPHLESLVASCNSLTE-LPEL----PQSLKSLLVDNNNLKA------LSDL---PPLLEYLGVSNNQLEK-LP- 147 (454)
T ss_dssp CSC---CTTCSEEECCSSCCSS-CCCC----CTTCCEEECCSSCCSC------CCSC---CTTCCEEECCSSCCSS-CC-
T ss_pred CCC---cCCCCEEEccCCcCCc-cccc----cCCCcEEECCCCccCc------ccCC---CCCCCEEECcCCCCCC-Cc-
Confidence 331 2456666666666663 5532 3566666666666652 1211 1466666666666664 44
Q ss_pred ccccCCcceeEEeecccccccCCCCCCccccceeeeccccccccCcchhcccCcccEEEeccccccccCCCcccccccce
Q 048430 215 MIFNNSNMVAILLYGNHLSGHLPSSIYLPNLENLFLWKNNLSGIIPDSICNASEATILELSSNLFSGLVPNTFGNCRQLQ 294 (973)
Q Consensus 215 ~~~~~~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~ 294 (973)
.+.++++|+.|++++|++++ +|.. .++|++|++++|++++ +| .++.+++|++|++++|.+++++ .. .++|+
T Consensus 148 ~~~~l~~L~~L~l~~N~l~~-lp~~--~~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~l~-~~---~~~L~ 218 (454)
T 1jl5_A 148 ELQNSSFLKIIDVDNNSLKK-LPDL--PPSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKKLP-DL---PLSLE 218 (454)
T ss_dssp CCTTCTTCCEEECCSSCCSC-CCCC--CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSSCC-CC---CTTCC
T ss_pred ccCCCCCCCEEECCCCcCcc-cCCC--cccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCcCC-CC---cCccc
Confidence 35555555555555555543 2211 2344444444444443 22 2444444444444444444321 11 12344
Q ss_pred EEEccCCcCCCCCCCcchhhhhhhccCCcCcEEEccCCCCCCCCCCcccccccccceeecccCCccccCCCCCCCCCccc
Q 048430 295 ILSLGDNQLTTGSSAQGQIFYSSLAKCRYLRVLVLDTNPLKGVIPNSIGNLSTSLENFYAGSSQLSGGIPVGFGNLSNLL 374 (973)
Q Consensus 295 ~L~L~~N~l~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~l~~l~l~~n~l~~~~p~~~~~l~~L~ 374 (973)
+|++++|+++. +| .++.+++|+
T Consensus 219 ~L~l~~n~l~~---------------------------------------------------------lp-~~~~l~~L~ 240 (454)
T 1jl5_A 219 SIVAGNNILEE---------------------------------------------------------LP-ELQNLPFLT 240 (454)
T ss_dssp EEECCSSCCSS---------------------------------------------------------CC-CCTTCTTCC
T ss_pred EEECcCCcCCc---------------------------------------------------------cc-ccCCCCCCC
Confidence 44444444432 22 144455555
Q ss_pred EEEeecCccccccCcccCCCCCCCEEEccCCcCCCCCchhhhccCcCCeeecCCccccCcCcccccCcCCCCeeeccCCC
Q 048430 375 VLSLVNNELAGAIPTVLGKLQKLQGLDLNSNKLKGFIPTDLCKLEKLNTLLSNNNALQGQIPTCLANLTSLRHLDFRSNS 454 (973)
Q Consensus 375 ~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 454 (973)
+|++++|++++ +|.. +++|++|++++|++++ +|.. .++|+.|++++|++++. +.. .++|+.|++++|+
T Consensus 241 ~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~l-~~~---~~~L~~L~l~~N~ 308 (454)
T 1jl5_A 241 TIYADNNLLKT-LPDL---PPSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSGL-SEL---PPNLYYLNASSNE 308 (454)
T ss_dssp EEECCSSCCSS-CCSC---CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSEE-SCC---CTTCCEEECCSSC
T ss_pred EEECCCCcCCc-cccc---ccccCEEECCCCcccc-cCcc---cCcCCEEECcCCccCcc-cCc---CCcCCEEECcCCc
Confidence 55555555553 2321 2455555555555553 3322 24555555555555531 110 1456666666666
Q ss_pred CCCCCccccccc-ccccEEEecCCcccCCcCcCccCCCCCCeEEccCCcCcccCCcccccCCcCCEEEcccCcccc--CC
Q 048430 455 LNSTIPSTFWSL-KYILAVDFSLNSLSGSLPLNIGNLEALGGLNLTGNQLSGYIPSSIGNLKNLDWLALARNAFQG--PI 531 (973)
Q Consensus 455 l~~~~p~~~~~l-~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~ 531 (973)
+++ ++ .+ ++|+.|++++|++++ +|.. +++|+.|++++|+++ .+|. .+++|+.|++++|++++ .+
T Consensus 309 l~~-i~----~~~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~-~lp~---~l~~L~~L~L~~N~l~~l~~i 375 (454)
T 1jl5_A 309 IRS-LC----DLPPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLA-EVPE---LPQNLKQLHVEYNPLREFPDI 375 (454)
T ss_dssp CSE-EC----CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCSSCCCC
T ss_pred CCc-cc----CCcCcCCEEECCCCcccc-cccc---CCcCCEEECCCCccc-cccc---hhhhccEEECCCCCCCcCCCC
Confidence 553 11 12 356666666666663 4432 356666666666666 3444 35666666666666665 45
Q ss_pred CCCcccccccccccccccccCCCCCccccccccccccccCCCcccc--cCC
Q 048430 532 PQSFGSLISLQSLDLSGNNISGEIPKSLEKLSRLVDFNVSFNGLEG--EIP 580 (973)
Q Consensus 532 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~--~~p 580 (973)
|.+++.+ +.|++.|.+|.. +++|+.|++++|+++| .+|
T Consensus 376 p~~l~~L--------~~n~~~~~i~~~---~~~L~~L~ls~N~l~~~~~iP 415 (454)
T 1jl5_A 376 PESVEDL--------RMNSHLAEVPEL---PQNLKQLHVETNPLREFPDIP 415 (454)
T ss_dssp CTTCCEE--------ECCC--------------------------------
T ss_pred hHHHHhh--------hhcccccccccc---cCcCCEEECCCCcCCccccch
Confidence 5554433 234455555542 3455666666666665 444
No 45
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=9.2e-42 Score=392.96 Aligned_cols=407 Identities=24% Similarity=0.308 Sum_probs=251.0
Q ss_pred CcEEEEecCCCCCCCcCCCCCCCCCCCcEEEecCCCCCCCCCcccccccCC-------------cEEEccCCCCCCCCCc
Q 048430 45 GRVAALSLPNLSLGGTLPPHVGNLSFLVSLNISGNSFYDTLPNELWHMRRL-------------KIIDFSSNSLSGSLPG 111 (973)
Q Consensus 45 ~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L-------------~~L~Ls~n~l~~~~p~ 111 (973)
.+++.|+++++++ |.+|+++++|++|++|++++|++.|.+|.+++++++| ++|++++|.++ .+|.
T Consensus 11 ~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~-~lp~ 88 (454)
T 1jl5_A 11 TFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLS-SLPE 88 (454)
T ss_dssp ------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCS-CCCS
T ss_pred ccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCccc-cCCC
Confidence 5688999999999 8999999999999999999999999999999999875 99999999998 5775
Q ss_pred cccCCCCCccEEEeeCcccCCCCCccccCCCCCCeEEccCccccccCCccccCCCCCccEEEcccccccccCCCCCCCcc
Q 048430 112 DMCNSFTQLESFDVSSNKITGEFPSAIVNISSLKSIRLDNNSLSGSFPTDLCTRLPSLVQLRLLGNNITGRIPNREIPNE 191 (973)
Q Consensus 112 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~p~~ 191 (973)
-.++|++|++++|.+++ +|.. +++|++|++++|+++ .+|.. .++|++|++++|+++ .+| .
T Consensus 89 ----~~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~-~l~~~----~~~L~~L~L~~n~l~------~lp-~ 148 (454)
T 1jl5_A 89 ----LPPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLK-ALSDL----PPLLEYLGVSNNQLE------KLP-E 148 (454)
T ss_dssp ----CCTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCS-CCCSC----CTTCCEEECCSSCCS------SCC-C
T ss_pred ----CcCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccC-cccCC----CCCCCEEECcCCCCC------CCc-c
Confidence 24799999999999996 7754 488999999999998 55532 279999999999997 456 5
Q ss_pred ccCCCCccEEEecCCcccCccccccccCCcceeEEeecccccccCCCCCCccccceeeeccccccccCcchhcccCcccE
Q 048430 192 IGNLHNLKILDLGGNNIAGLIPSMIFNNSNMVAILLYGNHLSGHLPSSIYLPNLENLFLWKNNLSGIIPDSICNASEATI 271 (973)
Q Consensus 192 l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~ 271 (973)
|+++++|++|++++|++++ +|..+ .+|+.|++++|++++ +|....+++|++|++++|++++ +|... ++|++
T Consensus 149 ~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~~~~~l~~L~~L~l~~N~l~~-l~~~~---~~L~~ 219 (454)
T 1jl5_A 149 LQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LPELQNLPFLTAIYADNNSLKK-LPDLP---LSLES 219 (454)
T ss_dssp CTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CCCCTTCTTCCEEECCSSCCSS-CCCCC---TTCCE
T ss_pred cCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-CccccCCCCCCEEECCCCcCCc-CCCCc---CcccE
Confidence 9999999999999999996 56543 589999999999998 5666679999999999999996 44432 58999
Q ss_pred EEeccccccccCCCcccccccceEEEccCCcCCCCCCCcchhhhhhhccCCcCcEEEccCCCCCCCCCCcccccccccce
Q 048430 272 LELSSNLFSGLVPNTFGNCRQLQILSLGDNQLTTGSSAQGQIFYSSLAKCRYLRVLVLDTNPLKGVIPNSIGNLSTSLEN 351 (973)
Q Consensus 272 L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~l~~ 351 (973)
|++++|.++.+ | .|+.+++|++|++++|++++++. ..++|+.|++++|++.+ +|.
T Consensus 220 L~l~~n~l~~l-p-~~~~l~~L~~L~l~~N~l~~l~~-----------~~~~L~~L~l~~N~l~~-l~~----------- 274 (454)
T 1jl5_A 220 IVAGNNILEEL-P-ELQNLPFLTTIYADNNLLKTLPD-----------LPPSLEALNVRDNYLTD-LPE----------- 274 (454)
T ss_dssp EECCSSCCSSC-C-CCTTCTTCCEEECCSSCCSSCCS-----------CCTTCCEEECCSSCCSC-CCC-----------
T ss_pred EECcCCcCCcc-c-ccCCCCCCCEEECCCCcCCcccc-----------cccccCEEECCCCcccc-cCc-----------
Confidence 99999999954 5 48999999999999999986432 12456666666666553 121
Q ss_pred eecccCCccccCCCCCCCCCcccEEEeecCccccccCcccCCCCCCCEEEccCCcCCCCCchhhhccCcCCeeecCCccc
Q 048430 352 FYAGSSQLSGGIPVGFGNLSNLLVLSLVNNELAGAIPTVLGKLQKLQGLDLNSNKLKGFIPTDLCKLEKLNTLLSNNNAL 431 (973)
Q Consensus 352 l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l 431 (973)
. +++|++|++++|.+++. |.. .++|++|++++|++++. + .+
T Consensus 275 --------------~---~~~L~~L~ls~N~l~~l-~~~---~~~L~~L~l~~N~l~~i-~----~~------------- 315 (454)
T 1jl5_A 275 --------------L---PQSLTFLDVSENIFSGL-SEL---PPNLYYLNASSNEIRSL-C----DL------------- 315 (454)
T ss_dssp --------------C---CTTCCEEECCSSCCSEE-SCC---CTTCCEEECCSSCCSEE-C----CC-------------
T ss_pred --------------c---cCcCCEEECcCCccCcc-cCc---CCcCCEEECcCCcCCcc-c----CC-------------
Confidence 0 14556666666666531 211 13455555555555421 1 11
Q ss_pred cCcCcccccCcCCCCeeeccCCCCCCCCcccccccccccEEEecCCcccCCcCcCccCCCCCCeEEccCCcCcc--cCCc
Q 048430 432 QGQIPTCLANLTSLRHLDFRSNSLNSTIPSTFWSLKYILAVDFSLNSLSGSLPLNIGNLEALGGLNLTGNQLSG--YIPS 509 (973)
Q Consensus 432 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~ 509 (973)
.++|++|++++|++++ +|.. +++|+.|++++|+++ .+|. .+++|+.|++++|++++ .+|.
T Consensus 316 ----------~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~-~lp~---~l~~L~~L~L~~N~l~~l~~ip~ 377 (454)
T 1jl5_A 316 ----------PPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLA-EVPE---LPQNLKQLHVEYNPLREFPDIPE 377 (454)
T ss_dssp ----------CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCSSCCCCCT
T ss_pred ----------cCcCCEEECCCCcccc-cccc---CCcCCEEECCCCccc-cccc---hhhhccEEECCCCCCCcCCCChH
Confidence 1356666666666664 3433 466777777777777 4555 36788888888888886 5666
Q ss_pred ccccCCcCCEEEcccCccccCCCCCcccccccccccccccccCC--CCCccccccccccccccCCCcccccCCC
Q 048430 510 SIGNLKNLDWLALARNAFQGPIPQSFGSLISLQSLDLSGNNISG--EIPKSLEKLSRLVDFNVSFNGLEGEIPS 581 (973)
Q Consensus 510 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~l~ls~N~l~~~~p~ 581 (973)
.++. |+.|.+.+.+|.. +++|+.|++++|++++ .+|.+ ++.|.+++|.+.+.+|.
T Consensus 378 ~l~~--------L~~n~~~~~i~~~---~~~L~~L~ls~N~l~~~~~iP~s------l~~L~~~~~~~~~~~~~ 434 (454)
T 1jl5_A 378 SVED--------LRMNSHLAEVPEL---PQNLKQLHVETNPLREFPDIPES------VEDLRMNSERVVDPYEF 434 (454)
T ss_dssp TCCE--------EECCC---------------------------------------------------------
T ss_pred HHHh--------hhhcccccccccc---cCcCCEEECCCCcCCccccchhh------HhheeCcCcccCCcccc
Confidence 5543 3457777777763 5788899999999987 66654 45566788888887775
No 46
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=2.1e-42 Score=407.19 Aligned_cols=253 Identities=21% Similarity=0.281 Sum_probs=211.2
Q ss_pred hcCCCCCccccccCceEEEEEEe-CCCeEEEEEEEeccchhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEEEEe
Q 048430 679 TNGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQEDRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALIMQY 757 (973)
Q Consensus 679 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 757 (973)
.++|...+.||+|+||.||+|+. .+|+.||+|++........+.+.+|+.+|+.++||||++++++|.+++..|+||||
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~ 235 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF 235 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEee
Confidence 36799999999999999999985 57999999999876666667899999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCC--CcEEEeecccccccCCCCC
Q 048430 758 MPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDD--MVAHLGDFGIAKLLDGVDP 835 (973)
Q Consensus 758 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~--~~~kl~Dfgla~~~~~~~~ 835 (973)
|++|+|.+++......+++.++..++.||+.||+||| +++|+||||||+|||++.+ +.+||+|||+|+.....
T Consensus 236 ~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH---~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~-- 310 (573)
T 3uto_A 236 MSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK-- 310 (573)
T ss_dssp CCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTT--
T ss_pred cCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCChhhccccCCCCCCEEEeeccceeEccCC--
Confidence 9999999999876667999999999999999999999 8999999999999999854 89999999999987532
Q ss_pred cccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhcccccCCCC
Q 048430 836 VTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLLSRE 915 (973)
Q Consensus 836 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 915 (973)
......+||+.|||||.+.+..++.++||||+||++|||++|+.||.+.... .....+.. .. .. .
T Consensus 311 ~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~--~~~~~i~~---~~--------~~--~ 375 (573)
T 3uto_A 311 QSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDD--ETLRNVKS---CD--------WN--M 375 (573)
T ss_dssp SEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH--HHHHHHHT---TC--------CC--C
T ss_pred CceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH--HHHHHHHh---CC--------CC--C
Confidence 2334457999999999999999999999999999999999999999653211 11111111 00 00 0
Q ss_pred chhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 916 DEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 916 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
.. .....+++++.+|+.+||+.||++||+++|+++|
T Consensus 376 ~~------~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~H 411 (573)
T 3uto_A 376 DD------SAFSGISEDGKDFIRKLLLADPNTRMTIHQALEH 411 (573)
T ss_dssp CS------GGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred Cc------ccccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 00 0112345678899999999999999999999986
No 47
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=2.7e-42 Score=401.33 Aligned_cols=250 Identities=20% Similarity=0.266 Sum_probs=201.2
Q ss_pred hcCCCCCccccccCceEEEEEEe-CCCeEEEEEEEeccc---hhhHHHHHHH---HHHHHhccCCceeEEEeeeecCCee
Q 048430 679 TNGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQE---DRALKSFDTE---CEVMRRIRHRNLIKIVSSCSNPGFK 751 (973)
Q Consensus 679 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e---~~~l~~l~h~niv~l~~~~~~~~~~ 751 (973)
.++|...++||+|+||.||+|+. .+|+.||||+++... ......+.+| +.+++.++|||||+++++|.+++..
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l 267 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 267 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence 36788999999999999999995 479999999997542 1222333444 5566677899999999999999999
Q ss_pred EEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccC
Q 048430 752 ALIMQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLD 831 (973)
Q Consensus 752 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~ 831 (973)
|+|||||+||+|.+++...+ .+++..+..++.||+.||+||| +++||||||||+|||++.+|.+||+|||+|+...
T Consensus 268 ylVmEy~~GGdL~~~l~~~~-~l~E~~a~~y~~qIl~aL~yLH---~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~ 343 (689)
T 3v5w_A 268 SFILDLMNGGDLHYHLSQHG-VFSEADMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFS 343 (689)
T ss_dssp EEEECCCCSCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECTTSCEEECCCTTCEECS
T ss_pred EEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCchHHeEEeCCCCEEecccceeeecC
Confidence 99999999999999998765 7999999999999999999999 8999999999999999999999999999998764
Q ss_pred CCCCcccccccccccccCccCCCC-CCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhcccc
Q 048430 832 GVDPVTQTMTLATIGYMAPEYGSE-GIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDAN 910 (973)
Q Consensus 832 ~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 910 (973)
.. .....+||+.|||||.+.. ..|+.++||||+||++|||++|+.||......+ ......... ...
T Consensus 344 ~~---~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~--~~~i~~~i~--------~~~ 410 (689)
T 3v5w_A 344 KK---KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD--KHEIDRMTL--------TMA 410 (689)
T ss_dssp SC---CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCC--HHHHHHHHH--------HCC
T ss_pred CC---CCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH--HHHHHHhhc--------CCC
Confidence 32 2234689999999998865 579999999999999999999999997533222 111111100 000
Q ss_pred cCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCC-----HHHHHHH
Q 048430 911 LLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERIN-----VKDALAD 957 (973)
Q Consensus 911 l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt-----~~evl~~ 957 (973)
. ..+..+++++.+++.+||+.||++|++ ++||++|
T Consensus 411 ~------------~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~H 450 (689)
T 3v5w_A 411 V------------ELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKES 450 (689)
T ss_dssp C------------CCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTS
T ss_pred C------------CCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcC
Confidence 0 011234567899999999999999998 6888765
No 48
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=8e-42 Score=378.30 Aligned_cols=287 Identities=34% Similarity=0.546 Sum_probs=234.5
Q ss_pred ccccCCCCHHHHHHHhcCCCCCccccccCceEEEEEEeCCCeEEEEEEEeccch-hhHHHHHHHHHHHHhccCCceeEEE
Q 048430 664 LATLSRISYHELQQATNGFGESNLLGSGSFDNVYKATLANGVSVAVKVFNLQED-RALKSFDTECEVMRRIRHRNLIKIV 742 (973)
Q Consensus 664 ~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~ 742 (973)
......+++.+++.+.++|...+.||+|+||.||+|+..+++.||||++..... .....+.+|+.++++++||||++++
T Consensus 14 ~~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~ 93 (326)
T 3uim_A 14 LGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLR 93 (326)
T ss_dssp -CCCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCC
T ss_pred cCccceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceE
Confidence 345667899999999999999999999999999999988899999999875432 2234689999999999999999999
Q ss_pred eeeecCCeeEEEEEecCCCCHHHHhhhCC---CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcE
Q 048430 743 SSCSNPGFKALIMQYMPQGSLEKWLYSHN---YSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVA 819 (973)
Q Consensus 743 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~---~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~ 819 (973)
+++..++..++||||+++|+|.+++.... ..+++..+..++.|++.||+|||+.+..+|+||||||+||+++.++.+
T Consensus 94 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~ 173 (326)
T 3uim_A 94 GFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEA 173 (326)
T ss_dssp EEECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCE
T ss_pred EEEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCE
Confidence 99999999999999999999999998654 349999999999999999999994222399999999999999999999
Q ss_pred EEeecccccccCCCCCcccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCcc---ccCcccHHHHHH
Q 048430 820 HLGDFGIAKLLDGVDPVTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEM---FTGEMSLKQWVA 896 (973)
Q Consensus 820 kl~Dfgla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~---~~~~~~~~~~~~ 896 (973)
||+|||+++..............||+.|+|||.+....++.++|||||||++|||++|+.||+.. .........|+.
T Consensus 174 kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 253 (326)
T 3uim_A 174 VVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVK 253 (326)
T ss_dssp EECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHT
T ss_pred EeccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHH
Confidence 99999999877544444445566999999999988888999999999999999999999999642 223344555655
Q ss_pred hhCCcc-hhhhcccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHH
Q 048430 897 ESLPGA-VTEVVDANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKK 960 (973)
Q Consensus 897 ~~~~~~-~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~ 960 (973)
...... .....+..... ..+..++..+.+++.+||+.||++|||++|++++|++
T Consensus 254 ~~~~~~~~~~~~~~~~~~----------~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~ 308 (326)
T 3uim_A 254 GLLKEKKLEALVDVDLQG----------NYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 308 (326)
T ss_dssp TTTSSCCSTTSSCTTCTT----------SCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHT
T ss_pred HHhhchhhhhhcChhhcc----------ccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcC
Confidence 433322 23333322221 1223567789999999999999999999999999975
No 49
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=1.4e-41 Score=375.27 Aligned_cols=280 Identities=34% Similarity=0.584 Sum_probs=230.7
Q ss_pred CHHHHHHHhcCCCCCccccccCceEEEEEEeCCCeEEEEEEEeccchhhHHHHHHHHHHHHhccCCceeEEEeeeecCCe
Q 048430 671 SYHELQQATNGFGESNLLGSGSFDNVYKATLANGVSVAVKVFNLQEDRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGF 750 (973)
Q Consensus 671 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 750 (973)
++.++..++++|...+.||+|+||.||+|+..+++.||||++........+.+.+|+.++++++||||+++++++.+.+.
T Consensus 30 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 109 (321)
T 2qkw_B 30 PLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNE 109 (321)
T ss_dssp CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTC
T ss_pred cHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCe
Confidence 34455567889999999999999999999988899999999877666667889999999999999999999999999999
Q ss_pred eEEEEEecCCCCHHHHhhhCC---CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccc
Q 048430 751 KALIMQYMPQGSLEKWLYSHN---YSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIA 827 (973)
Q Consensus 751 ~~lv~e~~~~gsL~~~l~~~~---~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla 827 (973)
.++||||+++|+|.+++.... ..+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++
T Consensus 110 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~ 186 (321)
T 2qkw_B 110 MILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGIS 186 (321)
T ss_dssp CEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCSTTEEECTTCCEEECCCTTC
T ss_pred EEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhc---CCCeecCCCCHHHEEECCCCCEEEeecccc
Confidence 999999999999999997653 35899999999999999999999 789999999999999999999999999999
Q ss_pred cccCCCCC-cccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCc-ccHHHHHHhh-CCcchh
Q 048430 828 KLLDGVDP-VTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGE-MSLKQWVAES-LPGAVT 904 (973)
Q Consensus 828 ~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~-~~~~~~~~~~-~~~~~~ 904 (973)
+....... .......||+.|+|||.+.+..++.++|||||||++|||++|+.||......+ .....|.... ..+...
T Consensus 187 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (321)
T 2qkw_B 187 KKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLE 266 (321)
T ss_dssp EECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCC
T ss_pred cccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHH
Confidence 86543222 22234468999999999888889999999999999999999999997654332 3344443322 222233
Q ss_pred hhcccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHH
Q 048430 905 EVVDANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIKK 963 (973)
Q Consensus 905 ~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~~ 963 (973)
..+++.+.. ..+..++..+.+++.+||+.||++||+++|++++|+.+.+
T Consensus 267 ~~~~~~~~~----------~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~ 315 (321)
T 2qkw_B 267 QIVDPNLAD----------KIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALR 315 (321)
T ss_dssp SSSSSSCTT----------CSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HhcChhhcc----------ccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhh
Confidence 333332221 1224567889999999999999999999999999998875
No 50
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=1e-41 Score=373.94 Aligned_cols=285 Identities=27% Similarity=0.500 Sum_probs=261.3
Q ss_pred ChHHHHhhhccCCCcccCCCCCCCCCCCCCCcce--EEEEEeeCCC--CcEEEEecCCCCCCC--cCCCCCCCCCCCcEE
Q 048430 1 ALVQLKARISLDPHNFFANNWNLSPTNTSASVCN--WVGVTCSIRH--GRVAALSLPNLSLGG--TLPPHVGNLSFLVSL 74 (973)
Q Consensus 1 al~~~k~~~~~~~~~~~~~~w~~~~~~~~~~~c~--w~gv~C~~~~--~~v~~l~l~~~~l~g--~~~~~l~~l~~L~~L 74 (973)
||++||+++. ||. .+++ |+. +.+||. |.||+|+..+ ++|+.|++++++++| .+|+.++.+++|++|
T Consensus 10 aL~~~k~~~~-~~~-~l~~-W~~-----~~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L 81 (313)
T 1ogq_A 10 ALLQIKKDLG-NPT-TLSS-WLP-----TTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFL 81 (313)
T ss_dssp HHHHHHHHTT-CCG-GGTT-CCT-----TSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTCSEE
T ss_pred HHHHHHHhcC-Ccc-cccC-CCC-----CCCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCCCCCCee
Confidence 7999999995 775 5664 754 578998 9999998765 899999999999999 999999999999999
Q ss_pred EecC-CCCCCCCCcccccccCCcEEEccCCCCCCCCCccccCCCCCccEEEeeCcccCCCCCccccCCCCCCeEEccCcc
Q 048430 75 NISG-NSFYDTLPNELWHMRRLKIIDFSSNSLSGSLPGDMCNSFTQLESFDVSSNKITGEFPSAIVNISSLKSIRLDNNS 153 (973)
Q Consensus 75 ~L~~-n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 153 (973)
+|++ |++.+.+|..|+++++|++|+|++|++++.+|..+ ..+++|++|+|++|.+++.+|..|.++++|++|+|++|+
T Consensus 82 ~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 160 (313)
T 1ogq_A 82 YIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFL-SQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNR 160 (313)
T ss_dssp EEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGG-GGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSC
T ss_pred eCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHH-hCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCCc
Confidence 9995 99999999999999999999999999998888765 789999999999999999999999999999999999999
Q ss_pred ccccCCccccCCCC-CccEEEcccccccccCCCCCCCccccCCCCccEEEecCCcccCccccccccCCcceeEEeecccc
Q 048430 154 LSGSFPTDLCTRLP-SLVQLRLLGNNITGRIPNREIPNEIGNLHNLKILDLGGNNIAGLIPSMIFNNSNMVAILLYGNHL 232 (973)
Q Consensus 154 l~~~ip~~~~~~l~-~L~~L~L~~N~l~~~~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~l~~n~l 232 (973)
++|.+|..++ .++ +|++|+|++|++++. +|..++.++ |++|+|++|++++.+|..+..+++|+.|++++|.+
T Consensus 161 l~~~~p~~l~-~l~~~L~~L~L~~N~l~~~-----~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l 233 (313)
T 1ogq_A 161 ISGAIPDSYG-SFSKLFTSMTISRNRLTGK-----IPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSL 233 (313)
T ss_dssp CEEECCGGGG-CCCTTCCEEECCSSEEEEE-----CCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEE
T ss_pred ccCcCCHHHh-hhhhcCcEEECcCCeeecc-----CChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCce
Confidence 9999998775 565 999999999999864 567888887 99999999999999999999999999999999999
Q ss_pred cccCCCCCCccccceeeeccccccccCcchhcccCcccEEEeccccccccCCCcccccccceEEEccCCc
Q 048430 233 SGHLPSSIYLPNLENLFLWKNNLSGIIPDSICNASEATILELSSNLFSGLVPNTFGNCRQLQILSLGDNQ 302 (973)
Q Consensus 233 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~ 302 (973)
++.++....+++|++|+|++|++++.+|..+..+++|++|+|++|++++.+|.. ..+++|+.|++++|+
T Consensus 234 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~-~~l~~L~~l~l~~N~ 302 (313)
T 1ogq_A 234 AFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG-GNLQRFDVSAYANNK 302 (313)
T ss_dssp CCBGGGCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS-TTGGGSCGGGTCSSS
T ss_pred eeecCcccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC-ccccccChHHhcCCC
Confidence 988888777899999999999999999999999999999999999999888876 888999999999987
No 51
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=4e-41 Score=369.77 Aligned_cols=264 Identities=24% Similarity=0.372 Sum_probs=218.3
Q ss_pred cCCCCCccccccCceEEEEEEe-CCCeEEEEEEEeccchhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEEEEec
Q 048430 680 NGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQEDRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALIMQYM 758 (973)
Q Consensus 680 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 758 (973)
++|...++||+|+||.||+|.. .+++.||+|++........+.+.+|++++++++||||+++++++.+.+..++||||+
T Consensus 10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~ 89 (310)
T 3s95_A 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYI 89 (310)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEec
Confidence 5677889999999999999996 468999999987666667788999999999999999999999999999999999999
Q ss_pred CCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCCCCcc-
Q 048430 759 PQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGVDPVT- 837 (973)
Q Consensus 759 ~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~- 837 (973)
++|+|.+++......+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.........
T Consensus 90 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 166 (310)
T 3s95_A 90 KGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLH---SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPE 166 (310)
T ss_dssp TTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEECTTSCEEECCCTTCEECC-------
T ss_pred CCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCcCeEEECCCCCEEEeecccceeccccccccc
Confidence 999999999986668999999999999999999999 7999999999999999999999999999998764322211
Q ss_pred ------------cccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhh
Q 048430 838 ------------QTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTE 905 (973)
Q Consensus 838 ------------~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 905 (973)
.....||+.|+|||.+.+..++.++|||||||++|||++|..||........... .....
T Consensus 167 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~--------~~~~~ 238 (310)
T 3s95_A 167 GLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFG--------LNVRG 238 (310)
T ss_dssp -------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSS--------BCHHH
T ss_pred ccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHh--------hhhhc
Confidence 1145699999999999999999999999999999999999999865332211100 00000
Q ss_pred hcccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHHHHHhh
Q 048430 906 VVDANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIKKILTQA 968 (973)
Q Consensus 906 ~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~~~~~~~ 968 (973)
..+ ...+..+++.+.+++.+||+.||++||+++|+++.|+++++.+...
T Consensus 239 ~~~--------------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~~~~~ 287 (310)
T 3s95_A 239 FLD--------------RYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHLAGH 287 (310)
T ss_dssp HHH--------------HTCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHHC
T ss_pred ccc--------------ccCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhccCc
Confidence 000 0111234566889999999999999999999999999999887643
No 52
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=2e-40 Score=361.20 Aligned_cols=251 Identities=24% Similarity=0.324 Sum_probs=209.9
Q ss_pred hcCCCCCccccccCceEEEEEEe-CCCeEEEEEEEeccchhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEEEEe
Q 048430 679 TNGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQEDRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALIMQY 757 (973)
Q Consensus 679 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 757 (973)
.++|...+.||+|+||.||+|.. .+++.||||++........+.+.+|+.++++++||||+++++++...+..++||||
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 98 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence 46799999999999999999984 67999999999876655667899999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCCCCcc
Q 048430 758 MPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGVDPVT 837 (973)
Q Consensus 758 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~ 837 (973)
+++|+|.+++... .+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++....... ..
T Consensus 99 ~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~ 172 (297)
T 3fxz_A 99 LAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ-SK 172 (297)
T ss_dssp CTTCBHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTT-CC
T ss_pred CCCCCHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHH---hCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCcc-cc
Confidence 9999999999876 5899999999999999999999 7899999999999999999999999999998765332 23
Q ss_pred cccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhcccccCCCCch
Q 048430 838 QTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLLSREDE 917 (973)
Q Consensus 838 ~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 917 (973)
.....||+.|+|||.+.+..++.++|||||||++|||++|+.||....... ..........+ .
T Consensus 173 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~~~~~~~~---------~------- 235 (297)
T 3fxz_A 173 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR-ALYLIATNGTP---------E------- 235 (297)
T ss_dssp BCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHHHHHHHCSC---------C-------
T ss_pred cCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHhCCCC---------C-------
Confidence 344579999999999988899999999999999999999999986532111 01111000000 0
Q ss_pred hhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 918 EDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 918 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
...+..++..+.+++.+||+.||++|||++|+++|
T Consensus 236 -----~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 270 (297)
T 3fxz_A 236 -----LQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 270 (297)
T ss_dssp -----CSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred -----CCCccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 00112345668899999999999999999999985
No 53
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=5.9e-41 Score=370.15 Aligned_cols=276 Identities=21% Similarity=0.320 Sum_probs=210.8
Q ss_pred hcCCCCCccccccCceEEEEEEeCCCeEEEEEEEeccchhhHHHHHHHHHHHHhccCCceeEEEeeeecCC----eeEEE
Q 048430 679 TNGFGESNLLGSGSFDNVYKATLANGVSVAVKVFNLQEDRALKSFDTECEVMRRIRHRNLIKIVSSCSNPG----FKALI 754 (973)
Q Consensus 679 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----~~~lv 754 (973)
.++|...++||+|+||.||+|+.. ++.||||++..... ....+.+|+.++++++||||+++++++.... ..++|
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv 100 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQDK-QSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLI 100 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCch-HHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEE
Confidence 357888899999999999999876 89999999965433 3345667999999999999999999997643 46999
Q ss_pred EEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCC----------CeEEccCCCCcEEeCCCCcEEEeec
Q 048430 755 MQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYST----------PIIHCDLKPNNVLLDDDMVAHLGDF 824 (973)
Q Consensus 755 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~----------~ivH~dlk~~Nill~~~~~~kl~Df 824 (973)
|||+++|+|.+++... .+++..+..++.|++.||+||| +. +|+||||||+||+++.++.+||+||
T Consensus 101 ~e~~~~g~L~~~l~~~--~~~~~~~~~i~~qi~~al~~LH---~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DF 175 (322)
T 3soc_A 101 TAFHEKGSLSDFLKAN--VVSWNELCHIAETMARGLAYLH---EDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADF 175 (322)
T ss_dssp EECCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHT---CCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCC
T ss_pred EecCCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHH---hhccccccccCCCEEeCCCChHhEEECCCCeEEEccC
Confidence 9999999999999875 4999999999999999999999 77 9999999999999999999999999
Q ss_pred ccccccCCCCCc-ccccccccccccCccCCCC-----CCCCcchhHHHHHHHHHHHHhCCCCCCccccCcc-cHHHHHHh
Q 048430 825 GIAKLLDGVDPV-TQTMTLATIGYMAPEYGSE-----GIVSISGDVYSFGILMMETFTRRKPTNEMFTGEM-SLKQWVAE 897 (973)
Q Consensus 825 gla~~~~~~~~~-~~~~~~~~~~y~aPE~~~~-----~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~-~~~~~~~~ 897 (973)
|+++........ ......||+.|+|||.+.+ ..++.++|||||||++|||++|+.||........ ........
T Consensus 176 g~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~ 255 (322)
T 3soc_A 176 GLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQ 255 (322)
T ss_dssp TTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCS
T ss_pred CcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhcc
Confidence 999876543322 2233579999999998776 3566789999999999999999999976433221 11111000
Q ss_pred hCCcchhhhcccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHHH
Q 048430 898 SLPGAVTEVVDANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIKKI 964 (973)
Q Consensus 898 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~~~ 964 (973)
.....+..+..... ..............+++++.+++.+||+.||++|||++|+++.|+++.+.
T Consensus 256 --~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~ 319 (322)
T 3soc_A 256 --HPSLEDMQEVVVHK-KKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRL 319 (322)
T ss_dssp --SCCHHHHHHHHTTS-CCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred --CCchhhhhhhhhcc-cCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 00011111100000 00011111122234677899999999999999999999999999999875
No 54
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=1.4e-40 Score=373.91 Aligned_cols=262 Identities=27% Similarity=0.482 Sum_probs=214.8
Q ss_pred hcCCCCCccccccCceEEEEEEe--------CCCeEEEEEEEeccc-hhhHHHHHHHHHHHHhc-cCCceeEEEeeeecC
Q 048430 679 TNGFGESNLLGSGSFDNVYKATL--------ANGVSVAVKVFNLQE-DRALKSFDTECEVMRRI-RHRNLIKIVSSCSNP 748 (973)
Q Consensus 679 ~~~~~~~~~lg~G~~g~Vy~~~~--------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~ 748 (973)
.++|...+.||+|+||.||+|+. .++..||||+++... ....+.+.+|+.+++++ +||||++++++|.+.
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 35788889999999999999985 245789999997553 34467899999999999 899999999999999
Q ss_pred CeeEEEEEecCCCCHHHHhhhCC---------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEe
Q 048430 749 GFKALIMQYMPQGSLEKWLYSHN---------------YSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLL 813 (973)
Q Consensus 749 ~~~~lv~e~~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill 813 (973)
+..++||||+++|+|.+++.... ..+++.++..++.||+.||+||| +.+|+||||||+||++
T Consensus 160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll 236 (370)
T 2psq_A 160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLV 236 (370)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEE
T ss_pred CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCeeccccchhhEEE
Confidence 99999999999999999998753 24899999999999999999999 7899999999999999
Q ss_pred CCCCcEEEeecccccccCCCCCc-ccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCccccCcccH
Q 048430 814 DDDMVAHLGDFGIAKLLDGVDPV-TQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFT-RRKPTNEMFTGEMSL 891 (973)
Q Consensus 814 ~~~~~~kl~Dfgla~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~ellt-g~~p~~~~~~~~~~~ 891 (973)
+.++.+||+|||+++........ ......+|+.|+|||.+.+..++.++|||||||++|||++ |+.||...... .+
T Consensus 237 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~--~~ 314 (370)
T 2psq_A 237 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE--EL 314 (370)
T ss_dssp CTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--GH
T ss_pred CCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHH--HH
Confidence 99999999999999876543322 2233457889999999988899999999999999999999 99998653221 11
Q ss_pred HHHHHhhCCcchhhhcccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHHHHHh
Q 048430 892 KQWVAESLPGAVTEVVDANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIKKILTQ 967 (973)
Q Consensus 892 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~~~~~~ 967 (973)
...+..... ...+..++.++.+++.+||+.+|++||++.|++++|+++.....+
T Consensus 315 ~~~~~~~~~----------------------~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~~~~ 368 (370)
T 2psq_A 315 FKLLKEGHR----------------------MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTN 368 (370)
T ss_dssp HHHHHTTCC----------------------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC-
T ss_pred HHHHhcCCC----------------------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHhcc
Confidence 111111000 001123566789999999999999999999999999999876654
No 55
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=3.3e-39 Score=371.96 Aligned_cols=362 Identities=20% Similarity=0.185 Sum_probs=212.6
Q ss_pred CCcCCCCCCCCCCCcEEEecCCCCCCCCCcccccccCCcEEEccCCCCCCCCCccccCCCCCccEEEeeCcccCCCCCcc
Q 048430 58 GGTLPPHVGNLSFLVSLNISGNSFYDTLPNELWHMRRLKIIDFSSNSLSGSLPGDMCNSFTQLESFDVSSNKITGEFPSA 137 (973)
Q Consensus 58 ~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~ 137 (973)
.+..+..++.+++|++|+|++|++.+ +| .++.+++|++|+|++|++++ +| ++.+++|++|+|++|++++. |
T Consensus 31 ~~~~~~~~~~l~~L~~L~Ls~n~l~~-~~-~l~~l~~L~~L~Ls~n~l~~-~~---~~~l~~L~~L~Ls~N~l~~~-~-- 101 (457)
T 3bz5_A 31 QATDTISEEQLATLTSLDCHNSSITD-MT-GIEKLTGLTKLICTSNNITT-LD---LSQNTNLTYLACDSNKLTNL-D-- 101 (457)
T ss_dssp CTTSEEEHHHHTTCCEEECCSSCCCC-CT-TGGGCTTCSEEECCSSCCSC-CC---CTTCTTCSEEECCSSCCSCC-C--
T ss_pred CcccccChhHcCCCCEEEccCCCccc-Ch-hhcccCCCCEEEccCCcCCe-Ec---cccCCCCCEEECcCCCCcee-e--
Confidence 33334445566666666666666644 24 45666666666666666653 33 35556666666666666542 2
Q ss_pred ccCCCCCCeEEccCccccccCCccccCCCCCccEEEcccccccccCCCCCCCccccCCCCccEEEecCCcccCccccccc
Q 048430 138 IVNISSLKSIRLDNNSLSGSFPTDLCTRLPSLVQLRLLGNNITGRIPNREIPNEIGNLHNLKILDLGGNNIAGLIPSMIF 217 (973)
Q Consensus 138 ~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~ 217 (973)
++++++|++|+|++|+++ .+| +..+++|++|++++|++++ ++ ++++++|++|++++|+..+.+ .+.
T Consensus 102 ~~~l~~L~~L~L~~N~l~-~l~---~~~l~~L~~L~l~~N~l~~------l~--l~~l~~L~~L~l~~n~~~~~~--~~~ 167 (457)
T 3bz5_A 102 VTPLTKLTYLNCDTNKLT-KLD---VSQNPLLTYLNCARNTLTE------ID--VSHNTQLTELDCHLNKKITKL--DVT 167 (457)
T ss_dssp CTTCTTCCEEECCSSCCS-CCC---CTTCTTCCEEECTTSCCSC------CC--CTTCTTCCEEECTTCSCCCCC--CCT
T ss_pred cCCCCcCCEEECCCCcCC-eec---CCCCCcCCEEECCCCccce------ec--cccCCcCCEEECCCCCccccc--ccc
Confidence 555555666666555555 233 3445555555555555542 11 444455555555555332222 111
Q ss_pred cCCcceeEEeecccccccCCCCCCccccceeeeccccccccCcchhcccCcccEEEeccccccccCCCcccccccceEEE
Q 048430 218 NNSNMVAILLYGNHLSGHLPSSIYLPNLENLFLWKNNLSGIIPDSICNASEATILELSSNLFSGLVPNTFGNCRQLQILS 297 (973)
Q Consensus 218 ~~~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~ 297 (973)
.+++|++|++++|+++++ | +..+++|+.|++++|+++++ .++.+++|++|+
T Consensus 168 -----------------------~l~~L~~L~ls~n~l~~l-~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~ 218 (457)
T 3bz5_A 168 -----------------------PQTQLTTLDCSFNKITEL-D--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLD 218 (457)
T ss_dssp -----------------------TCTTCCEEECCSSCCCCC-C--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEE
T ss_pred -----------------------cCCcCCEEECCCCcccee-c--cccCCCCCEEECcCCcCCee---ccccCCCCCEEE
Confidence 244455555555555442 2 44444455555555544443 134444444444
Q ss_pred ccCCcCCCCCCCcchhhhhhhccCCcCcEEEccCCCCCCCCCCcccccccccceeecccCCccccCCCCCCCCCcccEEE
Q 048430 298 LGDNQLTTGSSAQGQIFYSSLAKCRYLRVLVLDTNPLKGVIPNSIGNLSTSLENFYAGSSQLSGGIPVGFGNLSNLLVLS 377 (973)
Q Consensus 298 L~~N~l~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~ 377 (973)
+++|+++++ | +..+++|+.|+
T Consensus 219 Ls~N~l~~i---------------------------------------------------------p--~~~l~~L~~L~ 239 (457)
T 3bz5_A 219 CSSNKLTEI---------------------------------------------------------D--VTPLTQLTYFD 239 (457)
T ss_dssp CCSSCCSCC---------------------------------------------------------C--CTTCTTCSEEE
T ss_pred CcCCccccc---------------------------------------------------------C--ccccCCCCEEE
Confidence 444444321 1 33455566666
Q ss_pred eecCccccccCcccCCCCCCCEEEccCCcCCCCCchhhhccCcCCeeecCCccccCcCcccccCcCCCCeeeccCCCCCC
Q 048430 378 LVNNELAGAIPTVLGKLQKLQGLDLNSNKLKGFIPTDLCKLEKLNTLLSNNNALQGQIPTCLANLTSLRHLDFRSNSLNS 457 (973)
Q Consensus 378 Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 457 (973)
+++|++++.. ++.+++|+.|++++| +|+.|++++|.+.+.+| ++.+++|+.|++++|...+
T Consensus 240 l~~N~l~~~~---~~~l~~L~~L~l~~n--------------~L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~ 300 (457)
T 3bz5_A 240 CSVNPLTELD---VSTLSKLTTLHCIQT--------------DLLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLY 300 (457)
T ss_dssp CCSSCCSCCC---CTTCTTCCEEECTTC--------------CCSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCC
T ss_pred eeCCcCCCcC---HHHCCCCCEEeccCC--------------CCCEEECCCCccCCccc--ccccccCCEEECCCCcccc
Confidence 6666666432 344556666666654 34456666676665555 4567778888888887766
Q ss_pred CCcccccccccccEEEecCCcccCCcCcCccCCCCCCeEEccCCcCcccCCcccccCCcCCEEEcccCccccCCCCCccc
Q 048430 458 TIPSTFWSLKYILAVDFSLNSLSGSLPLNIGNLEALGGLNLTGNQLSGYIPSSIGNLKNLDWLALARNAFQGPIPQSFGS 537 (973)
Q Consensus 458 ~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 537 (973)
.+|. ...+|+.|++++ +++|+.|+|++|+|++ ++ ++.+++|+.|++++|+|++
T Consensus 301 ~l~~---~~~~L~~L~l~~-------------~~~L~~L~L~~N~l~~-l~--l~~l~~L~~L~l~~N~l~~-------- 353 (457)
T 3bz5_A 301 LLDC---QAAGITELDLSQ-------------NPKLVYLYLNNTELTE-LD--VSHNTKLKSLSCVNAHIQD-------- 353 (457)
T ss_dssp EEEC---TTCCCSCCCCTT-------------CTTCCEEECTTCCCSC-CC--CTTCTTCSEEECCSSCCCB--------
T ss_pred eecc---CCCcceEechhh-------------cccCCEEECCCCcccc-cc--cccCCcCcEEECCCCCCCC--------
Confidence 6653 234444444443 3688899999999986 33 8889999999999999985
Q ss_pred ccccccccccccccCCCCCccccccccccccccCCCcccccCCC
Q 048430 538 LISLQSLDLSGNNISGEIPKSLEKLSRLVDFNVSFNGLEGEIPS 581 (973)
Q Consensus 538 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~ 581 (973)
++.|..|++++|+++|. ..+..|..+++++|+++|.+|.
T Consensus 354 l~~L~~L~l~~n~l~g~-----~~~~~l~~l~l~~N~l~g~ip~ 392 (457)
T 3bz5_A 354 FSSVGKIPALNNNFEAE-----GQTITMPKETLTNNSLTIAVSP 392 (457)
T ss_dssp CTTGGGSSGGGTSEEEE-----EEEEECCCBCCBTTBEEEECCT
T ss_pred ccccccccccCCcEEec-----ceeeecCccccccCcEEEEcCh
Confidence 35678889999999876 3567788899999999999996
No 56
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=8.8e-41 Score=359.04 Aligned_cols=256 Identities=25% Similarity=0.376 Sum_probs=213.0
Q ss_pred cCCCCCccccccCceEEEEEEeCCCeEEEEEEEeccchhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEEEEecC
Q 048430 680 NGFGESNLLGSGSFDNVYKATLANGVSVAVKVFNLQEDRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALIMQYMP 759 (973)
Q Consensus 680 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 759 (973)
++|...+.||+|+||.||+|+..+++.||+|++..... ..+.+.+|++++++++||||+++++++.+.+..++||||++
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 88 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFME 88 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred hhceeeheecCCCccEEEEEEecCCCeEEEEEeccccc-CHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCC
Confidence 56778899999999999999998899999999975432 23679999999999999999999999999999999999999
Q ss_pred CCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCCCCcccc
Q 048430 760 QGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGVDPVTQT 839 (973)
Q Consensus 760 ~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~ 839 (973)
+++|.+++......+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++............
T Consensus 89 ~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 165 (269)
T 4hcu_A 89 HGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST 165 (269)
T ss_dssp TCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTT
T ss_pred CCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHH---hCCeecCCcchheEEEcCCCCEEecccccccccccccccccc
Confidence 99999999887767999999999999999999999 799999999999999999999999999999876433222333
Q ss_pred cccccccccCccCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCccccCcccHHHHHHhhCCcchhhhcccccCCCCchh
Q 048430 840 MTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFT-RRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLLSREDEE 918 (973)
Q Consensus 840 ~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 918 (973)
...+|+.|+|||......++.++||||+|+++|||++ |+.||...... ........+ ...
T Consensus 166 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~-----~~~~~~~~~---------~~~----- 226 (269)
T 4hcu_A 166 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS-----EVVEDISTG---------FRL----- 226 (269)
T ss_dssp STTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-----HHHHHHHTT---------CCC-----
T ss_pred CcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHH-----HHHHHHhcC---------ccC-----
Confidence 4457788999999988889999999999999999999 99998653211 111111000 000
Q ss_pred hhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHH
Q 048430 919 DADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIKK 963 (973)
Q Consensus 919 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~~ 963 (973)
..+..++.++.+++.+||+.+|++||+++|++++|+++.+
T Consensus 227 -----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~ 266 (269)
T 4hcu_A 227 -----YKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 266 (269)
T ss_dssp -----CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -----CCCCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHH
Confidence 0011234568899999999999999999999999999875
No 57
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=3.5e-39 Score=353.91 Aligned_cols=281 Identities=28% Similarity=0.454 Sum_probs=227.3
Q ss_pred ccCCCCHHHHHHHhcCCCCC------ccccccCceEEEEEEeCCCeEEEEEEEecc----chhhHHHHHHHHHHHHhccC
Q 048430 666 TLSRISYHELQQATNGFGES------NLLGSGSFDNVYKATLANGVSVAVKVFNLQ----EDRALKSFDTECEVMRRIRH 735 (973)
Q Consensus 666 ~~~~~~~~~~~~~~~~~~~~------~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~----~~~~~~~~~~e~~~l~~l~h 735 (973)
....+++.++..++++|... ++||+|+||.||+|.. +++.||||++... .....+.+.+|+.++++++|
T Consensus 11 ~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h 89 (307)
T 2nru_A 11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQH 89 (307)
T ss_dssp CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCC
T ss_pred CCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCC
Confidence 35678999999999999887 8999999999999987 5889999998643 23346789999999999999
Q ss_pred CceeEEEeeeecCCeeEEEEEecCCCCHHHHhhhC--CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEe
Q 048430 736 RNLIKIVSSCSNPGFKALIMQYMPQGSLEKWLYSH--NYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLL 813 (973)
Q Consensus 736 ~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill 813 (973)
|||+++++++.+.+..++||||+++++|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+||++
T Consensus 90 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dlkp~Nili 166 (307)
T 2nru_A 90 ENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILL 166 (307)
T ss_dssp TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEE
T ss_pred CCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecCCCCHHHEEE
Confidence 99999999999999999999999999999999743 246899999999999999999999 7899999999999999
Q ss_pred CCCCcEEEeecccccccCCCCCc-ccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHH
Q 048430 814 DDDMVAHLGDFGIAKLLDGVDPV-TQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLK 892 (973)
Q Consensus 814 ~~~~~~kl~Dfgla~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~ 892 (973)
+.++.+||+|||++......... ......|++.|+|||...+ .++.++|||||||++|||++|+.||....... ...
T Consensus 167 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-~~~ 244 (307)
T 2nru_A 167 DEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQ-LLL 244 (307)
T ss_dssp CTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSS-BTT
T ss_pred cCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchH-HHH
Confidence 99999999999999876432222 2234568999999997654 58899999999999999999999997644332 122
Q ss_pred HHHHhh--CCcchhhhcccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHH
Q 048430 893 QWVAES--LPGAVTEVVDANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIKK 963 (973)
Q Consensus 893 ~~~~~~--~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~~ 963 (973)
.+.... ....+.+.+++.+.. .+..+++.+.+++.+||+.+|++||+++|++++|+++..
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 245 DIKEEIEDEEKTIEDYIDKKMND-----------ADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306 (307)
T ss_dssp HHHHHHHTTSCCHHHHSCSSCSC-----------CCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred HHHHHhhhhhhhhhhhccccccc-----------cchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence 222211 112233333332211 123467789999999999999999999999999998754
No 58
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=1.7e-40 Score=363.68 Aligned_cols=265 Identities=25% Similarity=0.412 Sum_probs=205.6
Q ss_pred HHHHHhcCCCCCccccccCceEEEEEEeCCCeEEEEEEEeccc--hhhHHHHHHHHHHHHhccCCceeEEEeeeecCCee
Q 048430 674 ELQQATNGFGESNLLGSGSFDNVYKATLANGVSVAVKVFNLQE--DRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFK 751 (973)
Q Consensus 674 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 751 (973)
++....++|...+.||+|+||.||+|+. +++.||||++.... ....+.+.+|++++++++||||+++++++.+.+..
T Consensus 31 ~~~i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 109 (309)
T 3p86_A 31 DMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNL 109 (309)
T ss_dssp -CBCCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCC
T ss_pred cccCChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCce
Confidence 3334456788899999999999999987 48899999986543 34457899999999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHhhhCC--CCCCHHHHHHHHHHHHHHHHHhhhcCCCC--eEEccCCCCcEEeCCCCcEEEeecccc
Q 048430 752 ALIMQYMPQGSLEKWLYSHN--YSLTIRQRLDIMIDVASALEYLHHGYSTP--IIHCDLKPNNVLLDDDMVAHLGDFGIA 827 (973)
Q Consensus 752 ~lv~e~~~~gsL~~~l~~~~--~~l~~~~~~~i~~~i~~~L~~LH~~~~~~--ivH~dlk~~Nill~~~~~~kl~Dfgla 827 (973)
++||||+++|+|.+++.... ..+++..+..++.|++.||+||| +.+ |+||||||+||+++.++.+||+|||++
T Consensus 110 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a 186 (309)
T 3p86_A 110 SIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH---NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLS 186 (309)
T ss_dssp EEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHH---TSSSCCCCTTCCGGGEEECTTCCEEECCCC--
T ss_pred EEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHH---cCCCCEECCCCChhhEEEeCCCcEEECCCCCC
Confidence 99999999999999998754 23899999999999999999999 788 999999999999999999999999999
Q ss_pred cccCCCCCcccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhc
Q 048430 828 KLLDGVDPVTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVV 907 (973)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (973)
+..... ........||+.|+|||.+.+..++.++|||||||++|||++|+.||......+ ....+.....
T Consensus 187 ~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~--~~~~~~~~~~------- 256 (309)
T 3p86_A 187 RLKAST-FLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQ--VVAAVGFKCK------- 256 (309)
T ss_dssp ----------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHH--HHHHHHHSCC-------
T ss_pred cccccc-ccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHhcCC-------
Confidence 765322 222334579999999999999999999999999999999999999996532211 1111110000
Q ss_pred ccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHHHHH
Q 048430 908 DANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIKKILT 966 (973)
Q Consensus 908 d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~~~~~ 966 (973)
. ...+..+++++.+++.+||+.+|++||+++|+++.|+.+.+...
T Consensus 257 -----~---------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~~ 301 (309)
T 3p86_A 257 -----R---------LEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAV 301 (309)
T ss_dssp -----C---------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC---
T ss_pred -----C---------CCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhCC
Confidence 0 00112345678999999999999999999999999999887643
No 59
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=9.8e-40 Score=359.90 Aligned_cols=262 Identities=23% Similarity=0.304 Sum_probs=215.3
Q ss_pred CCCCHHHHHHHhcC----------CCCCccccccCceEEEEEEeC-CCeEEEEEEEeccchhhHHHHHHHHHHHHhccCC
Q 048430 668 SRISYHELQQATNG----------FGESNLLGSGSFDNVYKATLA-NGVSVAVKVFNLQEDRALKSFDTECEVMRRIRHR 736 (973)
Q Consensus 668 ~~~~~~~~~~~~~~----------~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ 736 (973)
..++++++..+++. |...+.||+|+||.||+|+.. +|+.||||++........+.+.+|+.++++++||
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 102 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF 102 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCT
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCC
Confidence 45778888887764 556679999999999999965 7999999999876655667899999999999999
Q ss_pred ceeEEEeeeecCCeeEEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCC
Q 048430 737 NLIKIVSSCSNPGFKALIMQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDD 816 (973)
Q Consensus 737 niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~ 816 (973)
||+++++++...+..++||||+++++|.+++... .+++..+..++.|++.||+||| +.+|+||||||+||+++.+
T Consensus 103 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~ 177 (321)
T 2c30_A 103 NVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQV--RLNEEQIATVCEAVLQALAYLH---AQGVIHRDIKSDSILLTLD 177 (321)
T ss_dssp TBCCEEEEEEETTEEEEEECCCCSCBHHHHHTTC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTT
T ss_pred CcceEEEEEEECCEEEEEEecCCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCC
Confidence 9999999999999999999999999999998754 5999999999999999999999 7899999999999999999
Q ss_pred CcEEEeecccccccCCCCCcccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHH
Q 048430 817 MVAHLGDFGIAKLLDGVDPVTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVA 896 (973)
Q Consensus 817 ~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~ 896 (973)
+.+||+|||++....... .......||+.|+|||...+..++.++|||||||++|||++|+.||..... ......+.
T Consensus 178 ~~~kl~Dfg~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~--~~~~~~~~ 254 (321)
T 2c30_A 178 GRVKLSDFGFCAQISKDV-PKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSP--VQAMKRLR 254 (321)
T ss_dssp CCEEECCCTTCEECCSSS-CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--HHHHHHHH
T ss_pred CcEEEeeeeeeeecccCc-cccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHh
Confidence 999999999998764322 223445799999999999988999999999999999999999999864321 11111111
Q ss_pred hhCCcchhhhcccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 897 ESLPGAVTEVVDANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 897 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
.... +.+ .....+++++.+++.+||+.||++||+++|+++|
T Consensus 255 ~~~~--------~~~------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 295 (321)
T 2c30_A 255 DSPP--------PKL------------KNSHKVSPVLRDFLERMLVRDPQERATAQELLDH 295 (321)
T ss_dssp HSSC--------CCC------------TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred cCCC--------CCc------------CccccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1100 000 0111245668899999999999999999999986
No 60
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=1.8e-40 Score=366.43 Aligned_cols=258 Identities=25% Similarity=0.423 Sum_probs=210.3
Q ss_pred cCCCCCccccccCceEEEEEEeC----CCeEEEEEEEecc-chhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEE
Q 048430 680 NGFGESNLLGSGSFDNVYKATLA----NGVSVAVKVFNLQ-EDRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALI 754 (973)
Q Consensus 680 ~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 754 (973)
++|...+.||+|+||.||+|+.. .+..||||+++.. .....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 128 (325)
T 3kul_A 49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIV 128 (325)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEE
T ss_pred hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEE
Confidence 46777899999999999999963 4567999999765 334457899999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCCC
Q 048430 755 MQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGVD 834 (973)
Q Consensus 755 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 834 (973)
|||+++|+|.+++......+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++......
T Consensus 129 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 205 (325)
T 3kul_A 129 TEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLS---DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDP 205 (325)
T ss_dssp EECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCSSCEECC---
T ss_pred eeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCcceEEECCCCCEEECCCCcccccccCc
Confidence 9999999999999877668999999999999999999999 7999999999999999999999999999998764332
Q ss_pred Cc--ccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCccccCcccHHHHHHhhCCcchhhhccccc
Q 048430 835 PV--TQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFT-RRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANL 911 (973)
Q Consensus 835 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 911 (973)
.. ......+|+.|+|||.+....++.++|||||||++|||++ |+.||......+ ....+... .
T Consensus 206 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~--~~~~~~~~------------~ 271 (325)
T 3kul_A 206 DAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRD--VISSVEEG------------Y 271 (325)
T ss_dssp -CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHH--HHHHHHTT------------C
T ss_pred cceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHH--HHHHHHcC------------C
Confidence 22 2223346788999999988889999999999999999999 999986532211 11111110 0
Q ss_pred CCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHHH
Q 048430 912 LSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIKKI 964 (973)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~~~ 964 (973)
. ...+..++.++.+++.+||+.||++||++.|+++.|+++.+.
T Consensus 272 ~----------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~ 314 (325)
T 3kul_A 272 R----------LPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRS 314 (325)
T ss_dssp C----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred C----------CCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhC
Confidence 0 001123566789999999999999999999999999998764
No 61
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=8.7e-41 Score=358.93 Aligned_cols=258 Identities=26% Similarity=0.376 Sum_probs=213.8
Q ss_pred hcCCCCCccccccCceEEEEEEeCCCeEEEEEEEeccchhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEEEEec
Q 048430 679 TNGFGESNLLGSGSFDNVYKATLANGVSVAVKVFNLQEDRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALIMQYM 758 (973)
Q Consensus 679 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 758 (973)
.++|...+.||+|+||.||+|+..++..||||+++.... ..+.+.+|+.++++++||||+++++++.+.+..++||||+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYI 85 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEcc
Confidence 457888899999999999999999899999999975432 3467899999999999999999999999999999999999
Q ss_pred CCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCCCCccc
Q 048430 759 PQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGVDPVTQ 838 (973)
Q Consensus 759 ~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~ 838 (973)
++++|.+++......+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||.+...........
T Consensus 86 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 162 (268)
T 3sxs_A 86 SNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLE---SHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSS 162 (268)
T ss_dssp TTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH---HTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEEC
T ss_pred CCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCcCcceEEECCCCCEEEccCccceecchhhhhcc
Confidence 999999999887667999999999999999999999 78999999999999999999999999999987654443333
Q ss_pred ccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCccccCcccHHHHHHhhCCcchhhhcccccCCCCch
Q 048430 839 TMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFT-RRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLLSREDE 917 (973)
Q Consensus 839 ~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 917 (973)
....+|+.|+|||......++.++||||||+++|||++ |+.||+.....+ .......+. ..
T Consensus 163 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~-----~~~~~~~~~---------~~---- 224 (268)
T 3sxs_A 163 VGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSE-----VVLKVSQGH---------RL---- 224 (268)
T ss_dssp CSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHH-----HHHHHHTTC---------CC----
T ss_pred cCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHH-----HHHHHHcCC---------CC----
Confidence 44557788999999888889999999999999999999 999986532211 111100000 00
Q ss_pred hhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHHH
Q 048430 918 EDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIKKI 964 (973)
Q Consensus 918 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~~~ 964 (973)
..+..+++.+.+++.+||+.+|++|||++|++++|+.+++.
T Consensus 225 ------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (268)
T 3sxs_A 225 ------YRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREK 265 (268)
T ss_dssp ------CCCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred ------CCCCcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhc
Confidence 00112345688999999999999999999999999988654
No 62
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=5.3e-41 Score=378.68 Aligned_cols=259 Identities=24% Similarity=0.396 Sum_probs=212.8
Q ss_pred hcCCCCCccccccCceEEEEEEeC-CCeEEEEEEEeccc-hhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEEEE
Q 048430 679 TNGFGESNLLGSGSFDNVYKATLA-NGVSVAVKVFNLQE-DRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALIMQ 756 (973)
Q Consensus 679 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 756 (973)
.++|...+.||+|+||.||+|+.. +++.||||+++... ....+.+.+|++++++++||||+++++++...+..++|||
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 192 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVME 192 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEE
Confidence 456778899999999999999975 78999999987543 2334678899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCCCCc
Q 048430 757 YMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGVDPV 836 (973)
Q Consensus 757 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 836 (973)
|+++|+|.+++......+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++........
T Consensus 193 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~ 269 (377)
T 3cbl_A 193 LVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLE---SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYA 269 (377)
T ss_dssp CCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEE
T ss_pred cCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcCCcccCHHHEEEcCCCcEEECcCCCceecCCCcee
Confidence 99999999999876667999999999999999999999 799999999999999999999999999999865322111
Q ss_pred c-cccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCccccCcccHHHHHHhhCCcchhhhcccccCCC
Q 048430 837 T-QTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFT-RRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLLSR 914 (973)
Q Consensus 837 ~-~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 914 (973)
. .....+++.|+|||.+....++.++|||||||++|||++ |+.||...... .....+... .
T Consensus 270 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~--~~~~~~~~~------------~--- 332 (377)
T 3cbl_A 270 ASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQ--QTREFVEKG------------G--- 332 (377)
T ss_dssp CCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHH--HHHHHHHTT------------C---
T ss_pred ecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcC------------C---
Confidence 1 112245788999999888889999999999999999998 99998653221 111111110 0
Q ss_pred CchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHHH
Q 048430 915 EDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIKKI 964 (973)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~~~ 964 (973)
+...+..+++++.+++.+||+.||++|||++|+++.|+++++.
T Consensus 333 -------~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~~ 375 (377)
T 3cbl_A 333 -------RLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKR 375 (377)
T ss_dssp -------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred -------CCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHhh
Confidence 0011223567789999999999999999999999999999864
No 63
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=9.9e-41 Score=363.92 Aligned_cols=275 Identities=24% Similarity=0.425 Sum_probs=211.9
Q ss_pred hcCCCCCccccccCceEEEEEEe-----CCCeEEEEEEEeccchhhHHHHHHHHHHHHhccCCceeEEEeeeec--CCee
Q 048430 679 TNGFGESNLLGSGSFDNVYKATL-----ANGVSVAVKVFNLQEDRALKSFDTECEVMRRIRHRNLIKIVSSCSN--PGFK 751 (973)
Q Consensus 679 ~~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~ 751 (973)
.++|...+.||+|+||.||+|++ .+++.||||++........+.+.+|++++++++||||+++++++.. ....
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 88 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 88 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSC
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCce
Confidence 35678889999999999999984 3689999999987666667889999999999999999999999854 4568
Q ss_pred EEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccC
Q 048430 752 ALIMQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLD 831 (973)
Q Consensus 752 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~ 831 (973)
++||||+++|+|.+++......+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++...
T Consensus 89 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~ 165 (295)
T 3ugc_A 89 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLP 165 (295)
T ss_dssp EEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCCSCC---
T ss_pred EEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHhhEEEcCCCeEEEccCccccccc
Confidence 9999999999999999887667999999999999999999999 7999999999999999999999999999998764
Q ss_pred CCCCc--ccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcc-hh-hhc
Q 048430 832 GVDPV--TQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGA-VT-EVV 907 (973)
Q Consensus 832 ~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~-~~-~~~ 907 (973)
..... ......++..|+|||.+.+..++.++|||||||++|||++|..|+...... ............ .. ...
T Consensus 166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 242 (295)
T 3ugc_A 166 QDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAE---FMRMIGNDKQGQMIVFHLI 242 (295)
T ss_dssp ----------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHH---HHHHHCTTCCTHHHHHHHH
T ss_pred CCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHH---HHhhhcCccccchhHHHHH
Confidence 32221 223345778899999998889999999999999999999999997642110 111111000000 00 000
Q ss_pred ccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHHHHH
Q 048430 908 DANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIKKILT 966 (973)
Q Consensus 908 d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~~~~~ 966 (973)
+ .+... .....+..+++++.+++.+||+.||++|||++|+++.|+++++.++
T Consensus 243 ~-~~~~~------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~l~ 294 (295)
T 3ugc_A 243 E-LLKNN------GRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMA 294 (295)
T ss_dssp H-HHHTT------CCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC--
T ss_pred H-HHhcc------CcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhcc
Confidence 0 00000 0111123466789999999999999999999999999999987654
No 64
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=2.5e-40 Score=364.73 Aligned_cols=249 Identities=22% Similarity=0.318 Sum_probs=207.4
Q ss_pred HhcCCCCCccccccCceEEEEEEe-CCCeEEEEEEEeccc--hhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEE
Q 048430 678 ATNGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQE--DRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALI 754 (973)
Q Consensus 678 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 754 (973)
..++|...+.||+|+||.||+|+. .+|+.||||++.... ....+.+.+|+++++.++||||+++++++...+..++|
T Consensus 13 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 92 (328)
T 3fe3_A 13 HIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLI 92 (328)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEE
Confidence 456789999999999999999996 689999999997542 34457788999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCCC
Q 048430 755 MQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGVD 834 (973)
Q Consensus 755 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 834 (973)
|||+++|+|.+++...+ .+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++......
T Consensus 93 ~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~- 167 (328)
T 3fe3_A 93 MEYASGGEVFDYLVAHG-RMKEKEARSKFRQIVSAVQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVG- 167 (328)
T ss_dssp ECCCTTCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSS-
T ss_pred EECCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCEeccCCCHHHEEEcCCCCEEEeeccCceecCCC-
Confidence 99999999999998765 6999999999999999999999 789999999999999999999999999999876432
Q ss_pred CcccccccccccccCccCCCCCCCC-cchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhcccccCC
Q 048430 835 PVTQTMTLATIGYMAPEYGSEGIVS-ISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLLS 913 (973)
Q Consensus 835 ~~~~~~~~~~~~y~aPE~~~~~~~~-~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 913 (973)
.......||+.|+|||.+.+..++ .++||||+||++|||++|+.||.... ......... ....
T Consensus 168 -~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~-----~~~~~~~i~--------~~~~-- 231 (328)
T 3fe3_A 168 -GKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN-----LKELRERVL--------RGKY-- 231 (328)
T ss_dssp -CGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHH--------HCCC--
T ss_pred -CccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCC-----HHHHHHHHH--------hCCC--
Confidence 233456799999999988877764 89999999999999999999996532 111111110 0000
Q ss_pred CCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 914 REDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
..+..++.++.+++.+||+.||++|||++|+++|
T Consensus 232 ----------~~p~~~s~~~~~li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 232 ----------RIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp ----------CCCTTSCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred ----------CCCCCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 0011235668899999999999999999999876
No 65
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=4.6e-40 Score=364.57 Aligned_cols=252 Identities=23% Similarity=0.336 Sum_probs=199.3
Q ss_pred HhcCCCCCccccccCceEEEEEEe-CCCeEEEEEEEeccc-hhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEEE
Q 048430 678 ATNGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQE-DRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALIM 755 (973)
Q Consensus 678 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 755 (973)
..++|...+.||+|+||.||+|+. .+|+.||||++.... ....+.+.+|++++++++||||+++++++...+..++||
T Consensus 8 l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 87 (347)
T 3zgw_A 8 LLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVL 87 (347)
T ss_dssp TTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEE
Confidence 457888999999999999999985 579999999987553 233467889999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCCCC
Q 048430 756 QYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGVDP 835 (973)
Q Consensus 756 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 835 (973)
||+++|+|.+++.... .+++.++..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||++........
T Consensus 88 E~~~gg~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~ 163 (347)
T 3zgw_A 88 EYCPGGELFDYIISQD-RLSEEETRVVFRQIVSAVAYVH---SQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKD 163 (347)
T ss_dssp ECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBC------
T ss_pred eCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCccHHHEEEcCCCCEEEEeccCcccccCCCC
Confidence 9999999999997765 6999999999999999999999 78999999999999999999999999999886654333
Q ss_pred cccccccccccccCccCCCCCCC-CcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhcccccCCC
Q 048430 836 VTQTMTLATIGYMAPEYGSEGIV-SISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLLSR 914 (973)
Q Consensus 836 ~~~~~~~~~~~y~aPE~~~~~~~-~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 914 (973)
.......||+.|+|||.+.+..+ +.++||||+||++|||++|+.||.... ......... ....
T Consensus 164 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~-----~~~~~~~i~--------~~~~--- 227 (347)
T 3zgw_A 164 YHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDN-----VMALYKKIM--------RGKY--- 227 (347)
T ss_dssp --------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHH--------HTCC---
T ss_pred ccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCC-----HHHHHHHHH--------cCCC---
Confidence 33445679999999998887765 899999999999999999999996521 111111110 0000
Q ss_pred CchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 048430 915 EDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADL 958 (973)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L 958 (973)
..+..+++++.+++.+||+.||++|||++|+++|-
T Consensus 228 ---------~~p~~~s~~~~~li~~~L~~dP~~Rps~~eil~hp 262 (347)
T 3zgw_A 228 ---------DVPKWLSPSSILLLQQMLQVDPKKRISMKNLLNHP 262 (347)
T ss_dssp ---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHTCH
T ss_pred ---------CCCCCCCHHHHHHHHHHcccCHhHCcCHHHHhcCc
Confidence 00112345678899999999999999999999873
No 66
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=3.9e-38 Score=366.21 Aligned_cols=346 Identities=28% Similarity=0.409 Sum_probs=178.3
Q ss_pred CCCCCcEEEecCCCCCCCCCcccccccCCcEEEccCCCCCCCCCccccCCCCCccEEEeeCcccCCCCCccccCCCCCCe
Q 048430 67 NLSFLVSLNISGNSFYDTLPNELWHMRRLKIIDFSSNSLSGSLPGDMCNSFTQLESFDVSSNKITGEFPSAIVNISSLKS 146 (973)
Q Consensus 67 ~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 146 (973)
.+++|+.|++++|.+. .+| .+..+++|++|||++|.+. .+|. +..+++|++|++++|++++..| ++++++|++
T Consensus 44 ~l~~l~~L~l~~~~i~-~l~-~~~~l~~L~~L~Ls~n~l~-~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~ 116 (466)
T 1o6v_A 44 DLDQVTTLQADRLGIK-SID-GVEYLNNLTQINFSNNQLT-DITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTG 116 (466)
T ss_dssp HHHTCCEEECCSSCCC-CCT-TGGGCTTCCEEECCSSCCC-CCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCE
T ss_pred HhccccEEecCCCCCc-cCc-chhhhcCCCEEECCCCccC-Cchh--hhccccCCEEECCCCccccChh--hcCCCCCCE
Confidence 3455666666666653 344 2555666666666666665 3333 4556666666666666654332 555666666
Q ss_pred EEccCccccccCCccccCCCCCccEEEcccccccccCCCCCCCccccCCCCccEEEecCCcccCccccccccCCcceeEE
Q 048430 147 IRLDNNSLSGSFPTDLCTRLPSLVQLRLLGNNITGRIPNREIPNEIGNLHNLKILDLGGNNIAGLIPSMIFNNSNMVAIL 226 (973)
Q Consensus 147 L~L~~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~ 226 (973)
|+|++|.++ .++. +..+++|++|++++|.+++ +| .++.+++|++|+++ |.+.+..+ +.
T Consensus 117 L~L~~n~l~-~~~~--~~~l~~L~~L~l~~n~l~~------~~-~~~~l~~L~~L~l~-~~~~~~~~--~~--------- 174 (466)
T 1o6v_A 117 LTLFNNQIT-DIDP--LKNLTNLNRLELSSNTISD------IS-ALSGLTSLQQLSFG-NQVTDLKP--LA--------- 174 (466)
T ss_dssp EECCSSCCC-CCGG--GTTCTTCSEEEEEEEEECC------CG-GGTTCTTCSEEEEE-ESCCCCGG--GT---------
T ss_pred EECCCCCCC-CChH--HcCCCCCCEEECCCCccCC------Ch-hhccCCcccEeecC-CcccCchh--hc---------
Confidence 666666555 3332 3455555555555555542 22 24555555555553 23322211 22
Q ss_pred eecccccccCCCCCCccccceeeeccccccccCcchhcccCcccEEEeccccccccCCCcccccccceEEEccCCcCCCC
Q 048430 227 LYGNHLSGHLPSSIYLPNLENLFLWKNNLSGIIPDSICNASEATILELSSNLFSGLVPNTFGNCRQLQILSLGDNQLTTG 306 (973)
Q Consensus 227 l~~n~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~ 306 (973)
.+++|++|++++|++++. ..+..+++|++|++++|.+.+..| ++.+++|++|++++|+++..
T Consensus 175 --------------~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~ 236 (466)
T 1o6v_A 175 --------------NLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI 236 (466)
T ss_dssp --------------TCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC
T ss_pred --------------cCCCCCEEECcCCcCCCC--hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc
Confidence 255666666666666543 235666666666666666665544 55566666666666665431
Q ss_pred CCCcchhhhhhhccCCcCcEEEccCCCCCCCCCCcccccccccceeecccCCccccCCCCCCCCCcccEEEeecCccccc
Q 048430 307 SSAQGQIFYSSLAKCRYLRVLVLDTNPLKGVIPNSIGNLSTSLENFYAGSSQLSGGIPVGFGNLSNLLVLSLVNNELAGA 386 (973)
Q Consensus 307 ~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~ 386 (973)
..+..+++ |+.|++++|.+++.
T Consensus 237 ---------~~l~~l~~-------------------------------------------------L~~L~l~~n~l~~~ 258 (466)
T 1o6v_A 237 ---------GTLASLTN-------------------------------------------------LTDLDLANNQISNL 258 (466)
T ss_dssp ---------GGGGGCTT-------------------------------------------------CSEEECCSSCCCCC
T ss_pred ---------hhhhcCCC-------------------------------------------------CCEEECCCCccccc
Confidence 12333444 44444444444432
Q ss_pred cCcccCCCCCCCEEEccCCcCCCCCchhhhccCcCCeeecCCccccCcCcccccCcCCCCeeeccCCCCCCCCccccccc
Q 048430 387 IPTVLGKLQKLQGLDLNSNKLKGFIPTDLCKLEKLNTLLSNNNALQGQIPTCLANLTSLRHLDFRSNSLNSTIPSTFWSL 466 (973)
Q Consensus 387 ~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 466 (973)
.+ +..+++|++|++++|++++..+ +..+++|+.|++++|++.+..+ +..+++|+.|++++|++++..| +..+
T Consensus 259 ~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l 330 (466)
T 1o6v_A 259 AP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSL 330 (466)
T ss_dssp GG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGC
T ss_pred hh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccC
Confidence 22 4444444555555554443222 4444444444444444443322 4445555555555555554433 4445
Q ss_pred ccccEEEecCCcccCCcCcCccCCCCCCeEEccCCcCcccCCcccccCCcCCEEEcccCcccc
Q 048430 467 KYILAVDFSLNSLSGSLPLNIGNLEALGGLNLTGNQLSGYIPSSIGNLKNLDWLALARNAFQG 529 (973)
Q Consensus 467 ~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 529 (973)
++|+.|++++|++++. ..+..+++|+.|++++|++++..| +..+++|+.|++++|.+++
T Consensus 331 ~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~~~~ 389 (466)
T 1o6v_A 331 TKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTN 389 (466)
T ss_dssp TTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG--GTTCTTCCEEECCCEEEEC
T ss_pred ccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCccCccch--hhcCCCCCEEeccCCcccC
Confidence 5555555555555532 245555666666666666655444 5556666666666666653
No 67
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=1.8e-39 Score=356.25 Aligned_cols=274 Identities=21% Similarity=0.262 Sum_probs=209.5
Q ss_pred HhcCCCCCccccccCceEEEEEEeCCCeEEEEEEEeccc--hhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEEE
Q 048430 678 ATNGFGESNLLGSGSFDNVYKATLANGVSVAVKVFNLQE--DRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALIM 755 (973)
Q Consensus 678 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 755 (973)
..++|...+.||+|+||.||+|+..+++.||+|++.... ....+.+.+|++++++++||||+++++++.+++..++||
T Consensus 19 l~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 98 (311)
T 3niz_A 19 LMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVF 98 (311)
T ss_dssp SSCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEE
T ss_pred hHhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEE
Confidence 457788999999999999999999889999999986543 223567889999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCCCC
Q 048430 756 QYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGVDP 835 (973)
Q Consensus 756 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 835 (973)
||+++ +|.+++......+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++......
T Consensus 99 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~- 173 (311)
T 3niz_A 99 EFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCH---QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPV- 173 (311)
T ss_dssp ECCSE-EHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEETTSCC-
T ss_pred cCCCC-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCchHhEEECCCCCEEEccCcCceecCCCc-
Confidence 99975 899988877767999999999999999999999 7899999999999999999999999999998764322
Q ss_pred cccccccccccccCccCCCC-CCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhC---Ccchhhhcccc-
Q 048430 836 VTQTMTLATIGYMAPEYGSE-GIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESL---PGAVTEVVDAN- 910 (973)
Q Consensus 836 ~~~~~~~~~~~y~aPE~~~~-~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~d~~- 910 (973)
.......+|+.|+|||.+.+ ..++.++||||+||++|||++|+.||......+ .+........ +..+....+..
T Consensus 174 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~ 252 (311)
T 3niz_A 174 RSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDD-QLPKIFSILGTPNPREWPQVQELPL 252 (311)
T ss_dssp C---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTT-HHHHHHHHHCCCCTTTSGGGTTSHH
T ss_pred ccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHHCCCChHHhhhhhccch
Confidence 22334568999999998765 568999999999999999999999997643332 2333222211 11111110000
Q ss_pred --cCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 911 --LLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 911 --l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
-.................+++++.+++.+||+.||++|||++|+++|
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 301 (311)
T 3niz_A 253 WKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNH 301 (311)
T ss_dssp HHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred hhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 00000000001111122355678999999999999999999999986
No 68
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=3.3e-40 Score=357.47 Aligned_cols=259 Identities=22% Similarity=0.360 Sum_probs=210.9
Q ss_pred HhcCCCCCccccccCceEEEEEEeCCCeEEEEEEEeccchhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEEEEe
Q 048430 678 ATNGFGESNLLGSGSFDNVYKATLANGVSVAVKVFNLQEDRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALIMQY 757 (973)
Q Consensus 678 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 757 (973)
..++|...+.||+|+||.||+|+..++..||||+++.... ..+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 100 (283)
T 3gen_A 22 DPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEY 100 (283)
T ss_dssp CGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECC
T ss_pred CHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEec
Confidence 3457888899999999999999999899999999975432 236789999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCCCCcc
Q 048430 758 MPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGVDPVT 837 (973)
Q Consensus 758 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~ 837 (973)
+++++|.+++......+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.........
T Consensus 101 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~ 177 (283)
T 3gen_A 101 MANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTS 177 (283)
T ss_dssp CTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHS
T ss_pred cCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCccceEEEcCCCCEEEcccccccccccccccc
Confidence 9999999999875567999999999999999999999 7899999999999999999999999999998764322222
Q ss_pred cccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCccccCcccHHHHHHhhCCcchhhhcccccCCCCc
Q 048430 838 QTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFT-RRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLLSRED 916 (973)
Q Consensus 838 ~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 916 (973)
.....+|+.|+|||......++.++||||+|+++|||++ |+.||...... .....+... ....
T Consensus 178 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~--~~~~~~~~~------------~~~~-- 241 (283)
T 3gen_A 178 SVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS--ETAEHIAQG------------LRLY-- 241 (283)
T ss_dssp TTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHH--HHHHHHHTT------------CCCC--
T ss_pred ccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChh--HHHHHHhcc------------cCCC--
Confidence 333457788999999888889999999999999999998 99998653221 111111110 0000
Q ss_pred hhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHHH
Q 048430 917 EEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIKKI 964 (973)
Q Consensus 917 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~~~ 964 (973)
.+..+++.+.+++.+||+.+|++||+++|++++|+++.+.
T Consensus 242 --------~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~ 281 (283)
T 3gen_A 242 --------RPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDE 281 (283)
T ss_dssp --------CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred --------CCCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhhc
Confidence 0112345688999999999999999999999999988753
No 69
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=3.1e-40 Score=371.21 Aligned_cols=259 Identities=22% Similarity=0.418 Sum_probs=202.0
Q ss_pred cCCCCCccccccCceEEEEEEeC----CCeEEEEEEEeccc-hhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEE
Q 048430 680 NGFGESNLLGSGSFDNVYKATLA----NGVSVAVKVFNLQE-DRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALI 754 (973)
Q Consensus 680 ~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 754 (973)
++|...+.||+|+||.||+|+.. ++..||||+++... ....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 124 (373)
T 2qol_A 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV 124 (373)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEE
Confidence 57888999999999999999864 57789999987653 34457899999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCCC
Q 048430 755 MQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGVD 834 (973)
Q Consensus 755 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 834 (973)
|||+++|+|.+++......+++.++..++.||++||+||| +.+|+||||||+||+++.++.+||+|||+++......
T Consensus 125 ~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 201 (373)
T 2qol_A 125 TEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDP 201 (373)
T ss_dssp EECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC----------
T ss_pred EeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCcceEEEcCCCCEEECcCccccccccCC
Confidence 9999999999999887768999999999999999999999 7899999999999999999999999999998764322
Q ss_pred Ccc--cccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCccccCcccHHHHHHhhCCcchhhhccccc
Q 048430 835 PVT--QTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFT-RRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANL 911 (973)
Q Consensus 835 ~~~--~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 911 (973)
... .....+++.|+|||.+....++.++|||||||++|||++ |+.||...... .....+. ...
T Consensus 202 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~--~~~~~i~------------~~~ 267 (373)
T 2qol_A 202 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ--DVIKAVD------------EGY 267 (373)
T ss_dssp ------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHH--HHHHHHH------------TTE
T ss_pred ccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHH------------cCC
Confidence 211 122245778999999988899999999999999999998 99998653211 1111111 100
Q ss_pred CCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHHHH
Q 048430 912 LSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIKKIL 965 (973)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~~~~ 965 (973)
. ...+..++.++.+++.+||+.||++||++.|+++.|+++.+..
T Consensus 268 ~----------~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~~ 311 (373)
T 2qol_A 268 R----------LPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP 311 (373)
T ss_dssp E----------CCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCG
T ss_pred C----------CCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhCc
Confidence 0 0011234567899999999999999999999999999987653
No 70
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=9.4e-40 Score=357.61 Aligned_cols=263 Identities=27% Similarity=0.440 Sum_probs=206.7
Q ss_pred hcCCCCCccccccCceEEEEEEeCCCeEEEEEEEecc--chhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEEEE
Q 048430 679 TNGFGESNLLGSGSFDNVYKATLANGVSVAVKVFNLQ--EDRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALIMQ 756 (973)
Q Consensus 679 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 756 (973)
.++|...++||+|+||.||+|+... .+|+|+++.. .....+.+.+|+.++++++||||+++++++. .+..++|||
T Consensus 35 ~~~~~~~~~lG~G~~g~Vy~~~~~~--~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e 111 (307)
T 3lb7_A 35 ASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQ 111 (307)
T ss_dssp TTSCCEEEEEEECSSCEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEE
T ss_pred ccceEEEeEecCCCCeEEEEEEECC--EEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEEe
Confidence 4678889999999999999998653 5899988653 2344578999999999999999999999875 455789999
Q ss_pred ecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCCC-C
Q 048430 757 YMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGVD-P 835 (973)
Q Consensus 757 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~-~ 835 (973)
|+++++|.+++......+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++...... .
T Consensus 112 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~~ 188 (307)
T 3lb7_A 112 WCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGS 188 (307)
T ss_dssp CCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCSSSEEECTTSCEEECCCCSSCC-------
T ss_pred cCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEeeCCCChhhEEEcCCCCEEEccCCCceeccccccc
Confidence 99999999999877778999999999999999999999 7899999999999999999999999999998653211 2
Q ss_pred cccccccccccccCccCCC---CCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhcccccC
Q 048430 836 VTQTMTLATIGYMAPEYGS---EGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLL 912 (973)
Q Consensus 836 ~~~~~~~~~~~y~aPE~~~---~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 912 (973)
.......||+.|+|||.+. ...++.++|||||||++|||++|+.||......+. ....+..... .+.+.
T Consensus 189 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~-~~~~~~~~~~-------~~~~~ 260 (307)
T 3lb7_A 189 QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQ-IIFMVGRGYA-------SPDLS 260 (307)
T ss_dssp -----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHH-HHHHHHHTCC-------CCCST
T ss_pred ccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHH-HHHHHhcCCC-------Ccchh
Confidence 2233457999999999764 66789999999999999999999999975432211 1111111110 00000
Q ss_pred CCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHHHHH
Q 048430 913 SREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIKKILT 966 (973)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~~~~~ 966 (973)
. ....+++++.+++.+||+.+|++||++.|++++|+.+...++
T Consensus 261 ~-----------~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~~p 303 (307)
T 3lb7_A 261 K-----------LYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLP 303 (307)
T ss_dssp T-----------SCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTTCC
T ss_pred h-----------hhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhhcc
Confidence 0 011345678999999999999999999999999999876543
No 71
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=2.4e-39 Score=354.14 Aligned_cols=264 Identities=24% Similarity=0.347 Sum_probs=206.3
Q ss_pred hcCCCCCccccccCceEEEEEEeCCCeEEEEEEEeccchhhHHHHHHHHHHHHh--ccCCceeEEEeeeec----CCeeE
Q 048430 679 TNGFGESNLLGSGSFDNVYKATLANGVSVAVKVFNLQEDRALKSFDTECEVMRR--IRHRNLIKIVSSCSN----PGFKA 752 (973)
Q Consensus 679 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~l~~~~~~----~~~~~ 752 (973)
.++|...+.||+|+||.||+|+. +++.||||++.... .+.+.+|.+++.. ++||||+++++++.. ....+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~ 82 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSRD---EKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLW 82 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGGG---HHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEecccc---chhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeE
Confidence 46788899999999999999988 58999999986443 3456677777776 789999999998643 35689
Q ss_pred EEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcC-----CCCeEEccCCCCcEEeCCCCcEEEeecccc
Q 048430 753 LIMQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGY-----STPIIHCDLKPNNVLLDDDMVAHLGDFGIA 827 (973)
Q Consensus 753 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~-----~~~ivH~dlk~~Nill~~~~~~kl~Dfgla 827 (973)
+||||+++|+|.++++.. .+++..+..++.|++.||+|||... +++|+||||||+||+++.++.+||+|||++
T Consensus 83 lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a 160 (301)
T 3q4u_A 83 LITHYHEMGSLYDYLQLT--TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA 160 (301)
T ss_dssp EEECCCTTCBHHHHHTTC--CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred EehhhccCCCHHHHHhhc--ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCCCe
Confidence 999999999999999654 6999999999999999999999321 578999999999999999999999999999
Q ss_pred cccCCCCCcc---cccccccccccCccCCCCC------CCCcchhHHHHHHHHHHHHhC----------CCCCCccccCc
Q 048430 828 KLLDGVDPVT---QTMTLATIGYMAPEYGSEG------IVSISGDVYSFGILMMETFTR----------RKPTNEMFTGE 888 (973)
Q Consensus 828 ~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~------~~~~~sDvws~Gvvl~elltg----------~~p~~~~~~~~ 888 (973)
+......... .....||+.|+|||.+... .++.++|||||||++|||++| +.||.......
T Consensus 161 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~ 240 (301)
T 3q4u_A 161 VMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPND 240 (301)
T ss_dssp EEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSS
T ss_pred eecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCC
Confidence 8664333221 2234799999999987766 455799999999999999999 78876655444
Q ss_pred ccHHHHHHhhCCcchhhhcccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHH
Q 048430 889 MSLKQWVAESLPGAVTEVVDANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKI 961 (973)
Q Consensus 889 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~ 961 (973)
................ ...........++.++.+++.+||+.||++|||++|+++.|+++
T Consensus 241 ~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 241 PSFEDMRKVVCVDQQR-------------PNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp CCHHHHHHHHTTSCCC-------------CCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred cchhhhhHHHhccCCC-------------CCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 4443332221111000 00001112234678899999999999999999999999999886
No 72
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=8.1e-40 Score=356.07 Aligned_cols=260 Identities=22% Similarity=0.389 Sum_probs=206.4
Q ss_pred hcCCCCCccccccCceEEEEEEe-CCCeEEEEEEEecc---chhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEE
Q 048430 679 TNGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQ---EDRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALI 754 (973)
Q Consensus 679 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 754 (973)
.++|...+.||+|+||.||+|+. .+++.||+|++... .....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 89 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV 89 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence 35788899999999999999985 47899999998643 234457899999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCCC
Q 048430 755 MQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGVD 834 (973)
Q Consensus 755 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 834 (973)
|||+++++|.+++.... .+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++......
T Consensus 90 ~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 165 (294)
T 4eqm_A 90 MEYIEGPTLSEYIESHG-PLSVDTAINFTNQILDGIKHAH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETS 165 (294)
T ss_dssp EECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC----
T ss_pred EeCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEEeCCCcccccccc
Confidence 99999999999998765 6999999999999999999999 7899999999999999999999999999998765433
Q ss_pred CcccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhcccccCCC
Q 048430 835 PVTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLLSR 914 (973)
Q Consensus 835 ~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 914 (973)
........||+.|+|||.+.+..++.++||||+||++|||++|+.||....... ....... .....
T Consensus 166 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~----~~~~~~~-~~~~~--------- 231 (294)
T 4eqm_A 166 LTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVS----IAIKHIQ-DSVPN--------- 231 (294)
T ss_dssp ---------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHH----HHHHHHS-SCCCC---------
T ss_pred ccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHH----HHHHHhh-ccCCC---------
Confidence 333444579999999999988889999999999999999999999996532111 1111110 00000
Q ss_pred CchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCC-CHHHHHHHHHHHH
Q 048430 915 EDEEDADDFATKKTCISYIMSLALKCSAEIPEERI-NVKDALADLKKIK 962 (973)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rp-t~~evl~~L~~~~ 962 (973)
.....+..+++.+.+++.+|++.||++|| +++++.+.|+.+.
T Consensus 232 ------~~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~ 274 (294)
T 4eqm_A 232 ------VTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVL 274 (294)
T ss_dssp ------HHHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSS
T ss_pred ------cchhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHH
Confidence 00011123467789999999999999999 8888988887654
No 73
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=8e-40 Score=353.98 Aligned_cols=262 Identities=23% Similarity=0.357 Sum_probs=202.7
Q ss_pred HhcCCCCCccccccCceEEEEEEeC----CCeEEEEEEEeccc-hhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeE
Q 048430 678 ATNGFGESNLLGSGSFDNVYKATLA----NGVSVAVKVFNLQE-DRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKA 752 (973)
Q Consensus 678 ~~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 752 (973)
..++|...+.||+|+||.||+|... .+..||+|+++... ....+.+.+|+.++++++||||+++++++. .+..+
T Consensus 13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~ 91 (281)
T 1mp8_A 13 QRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVW 91 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCE
T ss_pred ehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccE
Confidence 3467888899999999999999864 35679999986543 344578999999999999999999999985 45789
Q ss_pred EEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCC
Q 048430 753 LIMQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDG 832 (973)
Q Consensus 753 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~ 832 (973)
+||||+++++|.+++......+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 92 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 168 (281)
T 1mp8_A 92 IIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 168 (281)
T ss_dssp EEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECC---------
T ss_pred EEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecccccHHHEEECCCCCEEECccccccccCc
Confidence 999999999999999887667999999999999999999999 78999999999999999999999999999987654
Q ss_pred CCCcccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCccccCcccHHHHHHhhCCcchhhhccccc
Q 048430 833 VDPVTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFT-RRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANL 911 (973)
Q Consensus 833 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 911 (973)
..........+++.|+|||......++.++|||||||++|||++ |+.||......+ ....+.....
T Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~--~~~~i~~~~~----------- 235 (281)
T 1mp8_A 169 STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND--VIGRIENGER----------- 235 (281)
T ss_dssp ----------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG--HHHHHHTTCC-----------
T ss_pred ccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHH--HHHHHHcCCC-----------
Confidence 33333344457889999999888889999999999999999997 999987543221 1111111000
Q ss_pred CCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHHHHHh
Q 048430 912 LSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIKKILTQ 967 (973)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~~~~~~ 967 (973)
...+..+++++.+++.+||+.||++||++.|++++|+++.+.-..
T Consensus 236 -----------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~ 280 (281)
T 1mp8_A 236 -----------LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEKA 280 (281)
T ss_dssp -----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHH
T ss_pred -----------CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhcc
Confidence 001123466789999999999999999999999999999876543
No 74
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=5.3e-40 Score=374.48 Aligned_cols=263 Identities=18% Similarity=0.234 Sum_probs=210.9
Q ss_pred HHHHHHHhcCCCCCccccccCceEEEEEEeC-CCeEEEEEEEeccc---hhhHHHHHHHHHHHHhccCCceeEEEeeeec
Q 048430 672 YHELQQATNGFGESNLLGSGSFDNVYKATLA-NGVSVAVKVFNLQE---DRALKSFDTECEVMRRIRHRNLIKIVSSCSN 747 (973)
Q Consensus 672 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~ 747 (973)
+.++....++|...++||+|+||.||+|+.. +++.||||+++... ....+.+.+|+.++..++||||++++++|.+
T Consensus 66 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 145 (437)
T 4aw2_A 66 VKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQD 145 (437)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee
Confidence 3445556789999999999999999999965 58999999997532 1223458899999999999999999999999
Q ss_pred CCeeEEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccc
Q 048430 748 PGFKALIMQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIA 827 (973)
Q Consensus 748 ~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla 827 (973)
.+..++|||||++|+|.+++......+++..+..++.||+.||+||| +.+||||||||+|||++.++.+||+|||++
T Consensus 146 ~~~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH---~~giiHrDLKp~NILl~~~g~vkL~DFGla 222 (437)
T 4aw2_A 146 DNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVH---QLHYVHRDIKPDNILMDMNGHIRLADFGSC 222 (437)
T ss_dssp SSEEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred CCEEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHH---hCCeEecccCHHHeeEcCCCCEEEcchhhh
Confidence 99999999999999999999886568999999999999999999999 799999999999999999999999999999
Q ss_pred cccCCCCCcccccccccccccCccCCC-----CCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcc
Q 048430 828 KLLDGVDPVTQTMTLATIGYMAPEYGS-----EGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGA 902 (973)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~y~aPE~~~-----~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 902 (973)
+.............+||+.|+|||++. ...++.++|||||||++|||++|+.||...... ..........
T Consensus 223 ~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~-----~~~~~i~~~~ 297 (437)
T 4aw2_A 223 LKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLV-----ETYGKIMNHK 297 (437)
T ss_dssp EECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHH-----HHHHHHHTHH
T ss_pred hhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChh-----HHHHhhhhcc
Confidence 876544444444567999999999876 567899999999999999999999999653211 1111100000
Q ss_pred hhhhcccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCC--CCCHHHHHHH
Q 048430 903 VTEVVDANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEE--RINVKDALAD 957 (973)
Q Consensus 903 ~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~--Rpt~~evl~~ 957 (973)
... .+... ...+++++.+++.+|++.+|++ ||+++|+++|
T Consensus 298 -~~~---~~p~~-----------~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~H 339 (437)
T 4aw2_A 298 -ERF---QFPTQ-----------VTDVSENAKDLIRRLICSREHRLGQNGIEDFKKH 339 (437)
T ss_dssp -HHC---CCCSS-----------CCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred -ccc---cCCcc-----------cccCCHHHHHHHHHHhcccccccCCCCHHHHhCC
Confidence 000 00000 0113566889999999988888 9999999876
No 75
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=8.5e-40 Score=367.32 Aligned_cols=270 Identities=24% Similarity=0.374 Sum_probs=217.4
Q ss_pred CCHHHHHHHhcCCCCCccccccCceEEEEEEe------CCCeEEEEEEEeccc-hhhHHHHHHHHHHHHhc-cCCceeEE
Q 048430 670 ISYHELQQATNGFGESNLLGSGSFDNVYKATL------ANGVSVAVKVFNLQE-DRALKSFDTECEVMRRI-RHRNLIKI 741 (973)
Q Consensus 670 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l 741 (973)
.+..+++...++|...+.||+|+||.||+|++ .+++.||||+++... ....+.+.+|+++++++ +||||+++
T Consensus 12 ~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~ 91 (359)
T 3vhe_A 12 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 91 (359)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeee
Confidence 44556666778999999999999999999973 356899999997643 33457799999999999 79999999
Q ss_pred EeeeecCC-eeEEEEEecCCCCHHHHhhhCCC------------------------------------------------
Q 048430 742 VSSCSNPG-FKALIMQYMPQGSLEKWLYSHNY------------------------------------------------ 772 (973)
Q Consensus 742 ~~~~~~~~-~~~lv~e~~~~gsL~~~l~~~~~------------------------------------------------ 772 (973)
++++.+.+ ..++||||+++|+|.+++.....
T Consensus 92 ~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (359)
T 3vhe_A 92 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEK 171 (359)
T ss_dssp EEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC------------------------------------------
T ss_pred eeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccccccccc
Confidence 99987754 48999999999999999986532
Q ss_pred -----------------CCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCCCC
Q 048430 773 -----------------SLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGVDP 835 (973)
Q Consensus 773 -----------------~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 835 (973)
.+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.......
T Consensus 172 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 248 (359)
T 3vhe_A 172 SLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 248 (359)
T ss_dssp ------------CTTTTCBCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTT
T ss_pred ccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEEcCCCcEEEEeccceeeeccccc
Confidence 1899999999999999999999 78999999999999999999999999999986543222
Q ss_pred -cccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCccccCcccHHHHHHhhCCcchhhhcccccCC
Q 048430 836 -VTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFT-RRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLLS 913 (973)
Q Consensus 836 -~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 913 (973)
.......+|+.|+|||.+.+..++.++|||||||++|||++ |+.||......+ .....+......
T Consensus 249 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-~~~~~~~~~~~~------------ 315 (359)
T 3vhe_A 249 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-EFCRRLKEGTRM------------ 315 (359)
T ss_dssp CEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH-HHHHHHHHTCCC------------
T ss_pred chhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhH-HHHHHHHcCCCC------------
Confidence 23344568899999999888899999999999999999998 999986533222 111111111000
Q ss_pred CCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHHHH
Q 048430 914 REDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIKKIL 965 (973)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~~~~ 965 (973)
..+..+++++.+++.+||+.||++||+++|++++|+++.+..
T Consensus 316 ----------~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 357 (359)
T 3vhe_A 316 ----------RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 357 (359)
T ss_dssp ----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred ----------CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHHh
Confidence 001123566889999999999999999999999999998764
No 76
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.8e-39 Score=355.91 Aligned_cols=253 Identities=19% Similarity=0.278 Sum_probs=209.0
Q ss_pred hcCCCCCccccccCceEEEEEEeC-CCeEEEEEEEeccchhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEEEEe
Q 048430 679 TNGFGESNLLGSGSFDNVYKATLA-NGVSVAVKVFNLQEDRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALIMQY 757 (973)
Q Consensus 679 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 757 (973)
.++|...+.||+|+||.||+|... +++.||+|.+.... .....+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 82 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF 82 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence 467888999999999999999864 68999999987543 3346788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCC--CCcEEEeecccccccCCCCC
Q 048430 758 MPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDD--DMVAHLGDFGIAKLLDGVDP 835 (973)
Q Consensus 758 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~--~~~~kl~Dfgla~~~~~~~~ 835 (973)
+++|+|.+++......+++.++..++.|++.||.||| +.+|+||||||+||+++. ++.+||+|||+++......
T Consensus 83 ~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~- 158 (321)
T 1tki_A 83 ISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLH---SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD- 158 (321)
T ss_dssp CCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTC-
T ss_pred CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCC-
Confidence 9999999999877667999999999999999999999 789999999999999987 7899999999998765322
Q ss_pred cccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhcccccCCCC
Q 048430 836 VTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLLSRE 915 (973)
Q Consensus 836 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 915 (973)
......||+.|+|||.+.+..++.++|||||||++|||++|+.||...... .....+.. .... .
T Consensus 159 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--~~~~~i~~-----------~~~~--~ 222 (321)
T 1tki_A 159 -NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ--QIIENIMN-----------AEYT--F 222 (321)
T ss_dssp -EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHH--HHHHHHHH-----------TCCC--C
T ss_pred -ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHH--HHHHHHHc-----------CCCC--C
Confidence 234457999999999998888999999999999999999999999653211 11111111 0000 0
Q ss_pred chhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 048430 916 DEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADL 958 (973)
Q Consensus 916 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L 958 (973)
.......++.++.+++.+||+.||++|||+.|+++|=
T Consensus 223 ------~~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~hp 259 (321)
T 1tki_A 223 ------DEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHP 259 (321)
T ss_dssp ------CHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSH
T ss_pred ------ChhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhcCh
Confidence 0011123466789999999999999999999999874
No 77
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=4.4e-39 Score=359.01 Aligned_cols=252 Identities=22% Similarity=0.323 Sum_probs=207.0
Q ss_pred hcCCCCCccccccCceEEEEEEeC-CCeEEEEEEEeccchh------hHHHHHHHHHHHHhccCCceeEEEeeeecCCee
Q 048430 679 TNGFGESNLLGSGSFDNVYKATLA-NGVSVAVKVFNLQEDR------ALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFK 751 (973)
Q Consensus 679 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 751 (973)
.+.|...+.||+|+||.||+|+.. +|+.||+|+++..... ..+.+.+|+.++++++||||+++++++.+.+..
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 90 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV 90 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence 467888999999999999999964 6899999999755321 346889999999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCC----cEEEeecccc
Q 048430 752 ALIMQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDM----VAHLGDFGIA 827 (973)
Q Consensus 752 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~----~~kl~Dfgla 827 (973)
++||||+++|+|.+++.... .+++..+..++.||+.||.||| +.+|+||||||+||+++.++ .+||+|||++
T Consensus 91 ~lv~e~~~gg~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a 166 (361)
T 2yab_A 91 VLILELVSGGELFDFLAQKE-SLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166 (361)
T ss_dssp EEEEECCCSCBHHHHHTTCS-CCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCTTSSSCCEEECCCSSC
T ss_pred EEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEeCCCCCccCEEEEecCCc
Confidence 99999999999999997654 7999999999999999999999 78999999999999998877 7999999999
Q ss_pred cccCCCCCcccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhc
Q 048430 828 KLLDGVDPVTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVV 907 (973)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (973)
...... .......||+.|+|||.+....++.++||||+||++|||++|+.||..... ...........
T Consensus 167 ~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~-----~~~~~~i~~~~----- 234 (361)
T 2yab_A 167 HEIEDG--VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK-----QETLANITAVS----- 234 (361)
T ss_dssp EECCTT--CCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH-----HHHHHHHHTTC-----
T ss_pred eEcCCC--CccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHhcC-----
Confidence 876532 223345799999999999888999999999999999999999999965321 11111110000
Q ss_pred ccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 908 DANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 908 d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
. ... ...+..+++++.+++.+||+.||++|||++|+++|
T Consensus 235 ---~--~~~------~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h 273 (361)
T 2yab_A 235 ---Y--DFD------EEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRH 273 (361)
T ss_dssp ---C--CCC------HHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred ---C--CCC------chhccCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 0 000 01112345678999999999999999999999975
No 78
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=5.8e-39 Score=354.76 Aligned_cols=249 Identities=24% Similarity=0.284 Sum_probs=206.5
Q ss_pred hcCCCCCccccccCceEEEEEEeC-CCeEEEEEEEeccc---hhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEE
Q 048430 679 TNGFGESNLLGSGSFDNVYKATLA-NGVSVAVKVFNLQE---DRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALI 754 (973)
Q Consensus 679 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 754 (973)
.++|...+.||+|+||.||+|+.. +|+.||+|+++... ....+.+.+|+.+++.++||||+++++++...+..++|
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 83 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence 357888999999999999999964 69999999997542 23456788999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCCC
Q 048430 755 MQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGVD 834 (973)
Q Consensus 755 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 834 (973)
|||+++|+|.+++...+ .+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++......
T Consensus 84 ~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~ 159 (337)
T 1o6l_A 84 MEYANGGELFFHLSRER-VFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG 159 (337)
T ss_dssp EECCTTCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTT
T ss_pred EeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeecCcCCHHHEEECCCCCEEEeeccchhhcccCC
Confidence 99999999999998754 7899999999999999999999 7899999999999999999999999999998643222
Q ss_pred CcccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhcccccCCC
Q 048430 835 PVTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLLSR 914 (973)
Q Consensus 835 ~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 914 (973)
......+||+.|+|||.+.+..++.++|||||||++|||++|+.||..... ..+...+.. ....
T Consensus 160 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--~~~~~~i~~-----------~~~~-- 223 (337)
T 1o6l_A 160 -ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--ERLFELILM-----------EEIR-- 223 (337)
T ss_dssp -CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHH-----------CCCC--
T ss_pred -CcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCH--HHHHHHHHc-----------CCCC--
Confidence 223445799999999999999999999999999999999999999865221 111111110 0000
Q ss_pred CchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCC-----CHHHHHHH
Q 048430 915 EDEEDADDFATKKTCISYIMSLALKCSAEIPEERI-----NVKDALAD 957 (973)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rp-----t~~evl~~ 957 (973)
.+..+++++.+++.+||+.||++|| +++|+++|
T Consensus 224 ----------~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h 261 (337)
T 1o6l_A 224 ----------FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp ----------CCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred ----------CCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence 0112456688999999999999999 89999887
No 79
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=6.7e-39 Score=353.51 Aligned_cols=276 Identities=23% Similarity=0.315 Sum_probs=211.7
Q ss_pred cCCCCCccccccCceEEEEEEeC-CCeEEEEEEEeccc-hhhHHHHHHHHHHHHhccCCceeEEEeeeecCC--eeEEEE
Q 048430 680 NGFGESNLLGSGSFDNVYKATLA-NGVSVAVKVFNLQE-DRALKSFDTECEVMRRIRHRNLIKIVSSCSNPG--FKALIM 755 (973)
Q Consensus 680 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~--~~~lv~ 755 (973)
++|...++||+|+||.||+|+.. +++.||||+++... ....+.+.+|++++++++||||+++++++.... ..++||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEE
Confidence 46888899999999999999965 58999999987543 233577889999999999999999999987654 789999
Q ss_pred EecCCCCHHHHhhhCC--CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEe----CCCCcEEEeecccccc
Q 048430 756 QYMPQGSLEKWLYSHN--YSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLL----DDDMVAHLGDFGIAKL 829 (973)
Q Consensus 756 e~~~~gsL~~~l~~~~--~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill----~~~~~~kl~Dfgla~~ 829 (973)
||+++++|.+++.... ..+++.++..++.|++.||+||| +.+|+||||||+||++ +.++.+||+|||+++.
T Consensus 89 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~ 165 (319)
T 4euu_A 89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE 165 (319)
T ss_dssp ECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEE
T ss_pred eCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEEeccCCCCceEEEccCCCcee
Confidence 9999999999998654 23899999999999999999999 7899999999999999 7888899999999987
Q ss_pred cCCCCCcccccccccccccCccCCC--------CCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHH---HHHHhh
Q 048430 830 LDGVDPVTQTMTLATIGYMAPEYGS--------EGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLK---QWVAES 898 (973)
Q Consensus 830 ~~~~~~~~~~~~~~~~~y~aPE~~~--------~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~---~~~~~~ 898 (973)
..... ......||+.|+|||.+. ...++.++|||||||++|||++|+.||........... ......
T Consensus 166 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 243 (319)
T 4euu_A 166 LEDDE--QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGK 243 (319)
T ss_dssp CCTTC--CBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHC
T ss_pred cCCCC--ceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCC
Confidence 65332 223456999999999764 57789999999999999999999999965433222222 222222
Q ss_pred CCcchhhhcccccCCCCc--hhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHH
Q 048430 899 LPGAVTEVVDANLLSRED--EEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKI 961 (973)
Q Consensus 899 ~~~~~~~~~d~~l~~~~~--~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~ 961 (973)
.+..+..+... ...... ............++..+.+++.+||+.||++||+++|+++|....
T Consensus 244 p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~ 307 (319)
T 4euu_A 244 PSGAISGVQKA-ENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDI 307 (319)
T ss_dssp CTTCCEEEECS-TTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHH
T ss_pred Ccccchhhhcc-cCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHH
Confidence 11111111100 000000 000011122345678899999999999999999999999998754
No 80
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.1e-38 Score=352.69 Aligned_cols=272 Identities=24% Similarity=0.348 Sum_probs=209.2
Q ss_pred HHHHHHHhcCCCCCccccccCceEEEEEEeCCCeEEEEEEEeccchhhHHHHHHHHHHHHhc--cCCceeEEEeeeecC-
Q 048430 672 YHELQQATNGFGESNLLGSGSFDNVYKATLANGVSVAVKVFNLQEDRALKSFDTECEVMRRI--RHRNLIKIVSSCSNP- 748 (973)
Q Consensus 672 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l--~h~niv~l~~~~~~~- 748 (973)
...-....++|...+.||+|+||.||+|+.. ++.||||++..... ..+.+|.+++... +||||+++++++...
T Consensus 29 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~---~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~ 104 (337)
T 3mdy_A 29 LLVQRTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTEE---ASWFRETEIYQTVLMRHENILGFIAADIKGT 104 (337)
T ss_dssp HHHHTTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGGGH---HHHHHHHHHHTSTTCCCTTBCCEEEEEEESC
T ss_pred cccccccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecccc---chhhhHHHHHHHHhhcCCCeeeEEEEEccCC
Confidence 3334445678999999999999999999986 89999999864432 3455566666554 899999999998776
Q ss_pred ---CeeEEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCC--------CeEEccCCCCcEEeCCCC
Q 048430 749 ---GFKALIMQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYST--------PIIHCDLKPNNVLLDDDM 817 (973)
Q Consensus 749 ---~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~--------~ivH~dlk~~Nill~~~~ 817 (973)
...++||||+++|+|.+++... .+++..+..++.|++.||+||| +. +|+||||||+||+++.++
T Consensus 105 ~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH---~~~~~~~~~~~ivH~Dikp~Nill~~~~ 179 (337)
T 3mdy_A 105 GSWTQLYLITDYHENGSLYDYLKST--TLDAKSMLKLAYSSVSGLCHLH---TEIFSTQGKPAIAHRDLKSKNILVKKNG 179 (337)
T ss_dssp GGGCEEEEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHH---SCBCSTTCBCCEECSCCCGGGEEECTTS
T ss_pred CCCCceEEEEeccCCCcHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHH---HhhhhhccCCCEEecccchHHEEECCCC
Confidence 7889999999999999999875 5999999999999999999999 66 999999999999999999
Q ss_pred cEEEeecccccccCCCCCcc---cccccccccccCccCCCCCCCCcc------hhHHHHHHHHHHHHhC----------C
Q 048430 818 VAHLGDFGIAKLLDGVDPVT---QTMTLATIGYMAPEYGSEGIVSIS------GDVYSFGILMMETFTR----------R 878 (973)
Q Consensus 818 ~~kl~Dfgla~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~------sDvws~Gvvl~elltg----------~ 878 (973)
.+||+|||+++......... .....||+.|+|||.+.....+.+ +|||||||++|||++| +
T Consensus 180 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~ 259 (337)
T 3mdy_A 180 TCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQ 259 (337)
T ss_dssp CEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCC
T ss_pred CEEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCccccccccc
Confidence 99999999997664322221 124579999999998877666554 9999999999999999 5
Q ss_pred CCCCccccCcccHHHHHHhhCCcchhhhcccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 048430 879 KPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADL 958 (973)
Q Consensus 879 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L 958 (973)
.||............+........ .. ...........+++++.+++.+||+.||++||+++|++++|
T Consensus 260 ~p~~~~~~~~~~~~~~~~~~~~~~--------~~-----~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L 326 (337)
T 3mdy_A 260 LPYHDLVPSDPSYEDMREIVCIKK--------LR-----PSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTL 326 (337)
T ss_dssp CTTTTTSCSSCCHHHHHHHHTTSC--------CC-----CCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHH
T ss_pred ccHhhhcCCCCchhhhHHHHhhhc--------cC-----ccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHH
Confidence 565544433333333222111110 00 00111122346788899999999999999999999999999
Q ss_pred HHHHHHH
Q 048430 959 KKIKKIL 965 (973)
Q Consensus 959 ~~~~~~~ 965 (973)
+++.+..
T Consensus 327 ~~l~~~~ 333 (337)
T 3mdy_A 327 AKMSESQ 333 (337)
T ss_dssp HHHHHTT
T ss_pred HHHHhhc
Confidence 9988753
No 81
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=4.4e-39 Score=345.45 Aligned_cols=256 Identities=25% Similarity=0.373 Sum_probs=212.2
Q ss_pred cCCCCCccccccCceEEEEEEeCCCeEEEEEEEeccchhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEEEEecC
Q 048430 680 NGFGESNLLGSGSFDNVYKATLANGVSVAVKVFNLQEDRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALIMQYMP 759 (973)
Q Consensus 680 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 759 (973)
++|...+.||+|+||.||+|...+++.||+|++..... ..+.+.+|++++++++||||+++++++.+.+..++||||++
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 86 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFME 86 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCT
T ss_pred hheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCC
Confidence 56778899999999999999998899999999975533 23678999999999999999999999999999999999999
Q ss_pred CCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCCCCcccc
Q 048430 760 QGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGVDPVTQT 839 (973)
Q Consensus 760 ~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~ 839 (973)
+++|.+++......+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++............
T Consensus 87 ~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~ 163 (267)
T 3t9t_A 87 HGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST 163 (267)
T ss_dssp TCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTT
T ss_pred CCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCchheEEECCCCCEEEcccccccccccccccccc
Confidence 99999999987667999999999999999999999 789999999999999999999999999999876432222223
Q ss_pred cccccccccCccCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCccccCcccHHHHHHhhCCcchhhhcccccCCCCchh
Q 048430 840 MTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFT-RRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLLSREDEE 918 (973)
Q Consensus 840 ~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 918 (973)
...++..|+|||......++.++||||||+++|||++ |+.||..... .........+ ...
T Consensus 164 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-----~~~~~~i~~~---------~~~----- 224 (267)
T 3t9t_A 164 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN-----SEVVEDISTG---------FRL----- 224 (267)
T ss_dssp STTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH-----HHHHHHHHTT---------CCC-----
T ss_pred cccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCH-----HHHHHHHhcC---------CcC-----
Confidence 3457789999999888889999999999999999999 8999865321 1111111000 000
Q ss_pred hhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHH
Q 048430 919 DADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIKK 963 (973)
Q Consensus 919 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~~ 963 (973)
..+..++..+.+++.+||+.+|++||+++|++++|+++.+
T Consensus 225 -----~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (267)
T 3t9t_A 225 -----YKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 264 (267)
T ss_dssp -----CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -----CCCccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 0011234568899999999999999999999999999875
No 82
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=1.3e-38 Score=347.69 Aligned_cols=265 Identities=14% Similarity=0.113 Sum_probs=214.4
Q ss_pred hcCCCCCccccccCceEEEEEEe-CCCeEEEEEEEeccchhhHHHHHHHHHHHHhc-cCCceeEEEeeeecCCeeEEEEE
Q 048430 679 TNGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQEDRALKSFDTECEVMRRI-RHRNLIKIVSSCSNPGFKALIMQ 756 (973)
Q Consensus 679 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e 756 (973)
.++|...+.||+|+||.||+|+. .+++.||||++..... .+.+.+|+.+++++ +|+|++++++++.+....++|||
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e 86 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD--APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID 86 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT--SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCc--cHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEE
Confidence 35788899999999999999995 6799999999864432 35688999999999 79999999999999999999999
Q ss_pred ecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCc-----EEEeecccccccC
Q 048430 757 YMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMV-----AHLGDFGIAKLLD 831 (973)
Q Consensus 757 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~-----~kl~Dfgla~~~~ 831 (973)
|+ +++|.+++......+++.++..++.|++.||+||| +.+|+||||||+||+++.++. +||+|||+++...
T Consensus 87 ~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~ 162 (298)
T 1csn_A 87 LL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIH---EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYR 162 (298)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESB
T ss_pred ec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEeccCCCCCCCeEEEEECccccccc
Confidence 99 99999999987667999999999999999999999 899999999999999987776 9999999998765
Q ss_pred CCCCc------ccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhh
Q 048430 832 GVDPV------TQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTE 905 (973)
Q Consensus 832 ~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 905 (973)
..... ......||+.|+|||...+..++.++|||||||++|||++|+.||........ ...........
T Consensus 163 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~--~~~~~~~~~~~--- 237 (298)
T 1csn_A 163 DPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATN--KQKYERIGEKK--- 237 (298)
T ss_dssp CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCH--HHHHHHHHHHH---
T ss_pred cccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhcccc--HHHHHHHHhhc---
Confidence 43221 23445699999999999988999999999999999999999999976432211 11111000000
Q ss_pred hcccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHHHHH
Q 048430 906 VVDANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIKKILT 966 (973)
Q Consensus 906 ~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~~~~~ 966 (973)
. ..........+++++.+++.+||+.||++||+++++++.|+++.+...
T Consensus 238 -----~-------~~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~ 286 (298)
T 1csn_A 238 -----Q-------STPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLN 286 (298)
T ss_dssp -----H-------HSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred -----c-------CccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcC
Confidence 0 000000112356779999999999999999999999999999987654
No 83
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=3.9e-39 Score=371.78 Aligned_cols=251 Identities=27% Similarity=0.404 Sum_probs=207.3
Q ss_pred hcCCCCCccccccCceEEEEEEeCCCeEEEEEEEeccchhhHHHHHHHHHHHHhccCCceeEEEeeeecCC-eeEEEEEe
Q 048430 679 TNGFGESNLLGSGSFDNVYKATLANGVSVAVKVFNLQEDRALKSFDTECEVMRRIRHRNLIKIVSSCSNPG-FKALIMQY 757 (973)
Q Consensus 679 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-~~~lv~e~ 757 (973)
.++|...+.||+|+||.||+|... ++.||||+++... ..+.|.+|+.++++++||||+++++++.+.. ..++||||
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~ 268 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 268 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEEC
T ss_pred hHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEe
Confidence 456778899999999999999986 7899999997543 4578999999999999999999999987654 78999999
Q ss_pred cCCCCHHHHhhhCCC-CCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCCCCc
Q 048430 758 MPQGSLEKWLYSHNY-SLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGVDPV 836 (973)
Q Consensus 758 ~~~gsL~~~l~~~~~-~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 836 (973)
+++|+|.+++..... .+++..+..++.||+.||+||| +++|+||||||+||+++.++.+||+|||+++.....
T Consensus 269 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~--- 342 (450)
T 1k9a_A 269 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST--- 342 (450)
T ss_dssp CTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred cCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHhhEEECCCCCEEEeeCCCccccccc---
Confidence 999999999987653 4799999999999999999999 789999999999999999999999999999854321
Q ss_pred ccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCccccCcccHHHHHHhhCCcchhhhcccccCCCC
Q 048430 837 TQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFT-RRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLLSRE 915 (973)
Q Consensus 837 ~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 915 (973)
.....+++.|+|||.+....++.++|||||||++|||++ |+.||......+ ....+... .
T Consensus 343 -~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~--~~~~i~~~------------~---- 403 (450)
T 1k9a_A 343 -QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD--VVPRVEKG------------Y---- 403 (450)
T ss_dssp -----CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTT--HHHHHHTT------------C----
T ss_pred -ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHcC------------C----
Confidence 122357889999999988999999999999999999998 999987543221 11111110 0
Q ss_pred chhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHH
Q 048430 916 DEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIKK 963 (973)
Q Consensus 916 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~~ 963 (973)
+...+..+++++.+++.+||+.||++|||+.|+++.|+.+..
T Consensus 404 ------~~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~ 445 (450)
T 1k9a_A 404 ------KMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRT 445 (450)
T ss_dssp ------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ------CCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence 011123456789999999999999999999999999988764
No 84
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=2.7e-39 Score=356.49 Aligned_cols=253 Identities=22% Similarity=0.310 Sum_probs=205.0
Q ss_pred hcCCCCCccccccCceEEEEEEeC-CCeEEEEEEEeccch-hhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEEEE
Q 048430 679 TNGFGESNLLGSGSFDNVYKATLA-NGVSVAVKVFNLQED-RALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALIMQ 756 (973)
Q Consensus 679 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 756 (973)
.++|...+.||+|+||.||+|+.. +++.||||++..... ...+.+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 85 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence 357888999999999999999865 789999999875532 234678899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCCCC-
Q 048430 757 YMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGVDP- 835 (973)
Q Consensus 757 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~- 835 (973)
|+++|+|.+++.... .+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.......
T Consensus 86 ~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 161 (323)
T 3tki_A 86 YCSGGELFDRIEPDI-GMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161 (323)
T ss_dssp CCTTEEGGGGSBTTT-BCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred cCCCCcHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccccchHHEEEeCCCCEEEEEeeccceeccCCcc
Confidence 999999999997654 6999999999999999999999 79999999999999999999999999999986532221
Q ss_pred cccccccccccccCccCCCCCCC-CcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhcccccCCC
Q 048430 836 VTQTMTLATIGYMAPEYGSEGIV-SISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLLSR 914 (973)
Q Consensus 836 ~~~~~~~~~~~y~aPE~~~~~~~-~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 914 (973)
.......||+.|+|||.+.+..+ +.++|||||||++|||++|+.||............+.......
T Consensus 162 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~------------- 228 (323)
T 3tki_A 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL------------- 228 (323)
T ss_dssp CCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCTTS-------------
T ss_pred cccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcccccC-------------
Confidence 12234579999999998877665 7899999999999999999999976433322222222110000
Q ss_pred CchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 915 EDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
.....++.++.+++.+||+.||++|||++|++++
T Consensus 229 ---------~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 229 ---------NPWKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp ---------TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred ---------CccccCCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 0012245668899999999999999999999876
No 85
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=8.3e-39 Score=354.47 Aligned_cols=263 Identities=16% Similarity=0.146 Sum_probs=211.9
Q ss_pred hcCCCCCccccccCceEEEEEEe-CCCeEEEEEEEeccchhhHHHHHHHHHHHHhc-cCCceeEEEeeeecCCeeEEEEE
Q 048430 679 TNGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQEDRALKSFDTECEVMRRI-RHRNLIKIVSSCSNPGFKALIMQ 756 (973)
Q Consensus 679 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e 756 (973)
.++|...+.||+|+||.||+|+. .+++.||||++..... .+.+.+|+++++++ +||||+++++++...+..++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e 85 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLE 85 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEE
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEE
Confidence 35788899999999999999995 6799999999875433 24688999999999 89999999999999999999999
Q ss_pred ecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCc-----EEEeecccccccC
Q 048430 757 YMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMV-----AHLGDFGIAKLLD 831 (973)
Q Consensus 757 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~-----~kl~Dfgla~~~~ 831 (973)
|+ +++|.+++......+++..+..++.|++.||+||| +.+|+||||||+||+++.++. +||+|||+++...
T Consensus 86 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~ 161 (330)
T 2izr_A 86 LL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVH---SKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYI 161 (330)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESB
T ss_pred eC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeee
Confidence 99 89999999976668999999999999999999999 789999999999999999887 9999999998764
Q ss_pred CCCCc------ccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhh
Q 048430 832 GVDPV------TQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTE 905 (973)
Q Consensus 832 ~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 905 (973)
..... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||....... ....+.........
T Consensus 162 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~--~~~~~~~i~~~~~~- 238 (330)
T 2izr_A 162 DPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADT--LKERYQKIGDTKRA- 238 (330)
T ss_dssp CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSS--HHHHHHHHHHHHHH-
T ss_pred cCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCcccccccc--HHHHHHHHHhhhcc-
Confidence 33221 1234579999999999999999999999999999999999999997643221 11111110000000
Q ss_pred hcccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHHHH
Q 048430 906 VVDANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIKKIL 965 (973)
Q Consensus 906 ~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~~~~ 965 (973)
. ........++ ++.+++..||+.+|.+||+++++.+.|+++.+..
T Consensus 239 ~--------------~~~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~ 283 (330)
T 2izr_A 239 T--------------PIEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRK 283 (330)
T ss_dssp S--------------CHHHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred C--------------CHHHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHc
Confidence 0 0000001134 7999999999999999999999999999887654
No 86
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=1.6e-39 Score=359.49 Aligned_cols=260 Identities=24% Similarity=0.384 Sum_probs=205.4
Q ss_pred cCCCCCccccccCceEEEEEEeC-CCe----EEEEEEEeccc-hhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEE
Q 048430 680 NGFGESNLLGSGSFDNVYKATLA-NGV----SVAVKVFNLQE-DRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKAL 753 (973)
Q Consensus 680 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 753 (973)
++|...++||+|+||.||+|+.. +++ +||+|.++... ....+.+.+|+.++++++||||++++++|.... .++
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~ 93 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL 93 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EEE
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEE
Confidence 56788899999999999999853 444 45788775432 234578999999999999999999999998754 789
Q ss_pred EEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCC
Q 048430 754 IMQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGV 833 (973)
Q Consensus 754 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 833 (973)
|+||+++|+|.+++......+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 94 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~ 170 (327)
T 3poz_A 94 ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 170 (327)
T ss_dssp EEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTT
T ss_pred EEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCChheEEECCCCCEEEccCcceeEccCC
Confidence 99999999999999987778999999999999999999999 789999999999999999999999999999876543
Q ss_pred CCc-ccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCccccCcccHHHHHHhhCCcchhhhccccc
Q 048430 834 DPV-TQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFT-RRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANL 911 (973)
Q Consensus 834 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 911 (973)
... ......+|+.|+|||.+.+..++.++|||||||++|||++ |+.||...... .+...+.....
T Consensus 171 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~~~~~~~~~~~----------- 237 (327)
T 3poz_A 171 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS--EISSILEKGER----------- 237 (327)
T ss_dssp CC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--GHHHHHHTTCC-----------
T ss_pred cccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHH--HHHHHHHcCCC-----------
Confidence 322 2233457889999999999999999999999999999999 99999754322 22222211100
Q ss_pred CCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHHHHHh
Q 048430 912 LSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIKKILTQ 967 (973)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~~~~~~ 967 (973)
. ..+..++.++.+++.+||+.+|++||++.|++++|+.+.+...+
T Consensus 238 -~----------~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~~~~ 282 (327)
T 3poz_A 238 -L----------PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQR 282 (327)
T ss_dssp -C----------CCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTSHHH
T ss_pred -C----------CCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhhhhh
Confidence 0 01122456688999999999999999999999999998865543
No 87
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=8.1e-39 Score=360.12 Aligned_cols=253 Identities=21% Similarity=0.300 Sum_probs=208.8
Q ss_pred hcCCCCCccccccCceEEEEEEeC-CCeEEEEEEEeccchhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEEEEe
Q 048430 679 TNGFGESNLLGSGSFDNVYKATLA-NGVSVAVKVFNLQEDRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALIMQY 757 (973)
Q Consensus 679 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 757 (973)
.++|...+.||+|+||.||+|... +++.||+|++..........+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~ 129 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF 129 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence 457888999999999999999864 7899999999766555567889999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCC--CCcEEEeecccccccCCCCC
Q 048430 758 MPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDD--DMVAHLGDFGIAKLLDGVDP 835 (973)
Q Consensus 758 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~--~~~~kl~Dfgla~~~~~~~~ 835 (973)
+++|+|.+++......+++.++..++.||+.||+||| +.+|+||||||+||+++. ++.+||+|||+++......
T Consensus 130 ~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~- 205 (387)
T 1kob_A 130 LSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMH---EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE- 205 (387)
T ss_dssp CCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTS-
T ss_pred CCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccchHHeEEecCCCCceEEEecccceecCCCc-
Confidence 9999999999877667999999999999999999999 789999999999999974 5789999999998765322
Q ss_pred cccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhcccccCCCC
Q 048430 836 VTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLLSRE 915 (973)
Q Consensus 836 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 915 (973)
......||+.|+|||.+....++.++|||||||++|||++|+.||..... ......+...... .+..
T Consensus 206 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~--~~~~~~i~~~~~~-----~~~~----- 272 (387)
T 1kob_A 206 -IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDD--LETLQNVKRCDWE-----FDED----- 272 (387)
T ss_dssp -CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH--HHHHHHHHHCCCC-----CCSS-----
T ss_pred -ceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCH--HHHHHHHHhCCCC-----CCcc-----
Confidence 23345799999999999988999999999999999999999999865321 1111111110000 0000
Q ss_pred chhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 916 DEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 916 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
....++.++.+++.+||+.||++|||+.|+++|
T Consensus 273 ---------~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 273 ---------AFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp ---------TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred ---------ccccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 001245678899999999999999999999986
No 88
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=4.4e-39 Score=363.85 Aligned_cols=260 Identities=28% Similarity=0.458 Sum_probs=213.1
Q ss_pred hcCCCCCccccccCceEEEEEEe--------CCCeEEEEEEEeccc-hhhHHHHHHHHHHHHhc-cCCceeEEEeeeecC
Q 048430 679 TNGFGESNLLGSGSFDNVYKATL--------ANGVSVAVKVFNLQE-DRALKSFDTECEVMRRI-RHRNLIKIVSSCSNP 748 (973)
Q Consensus 679 ~~~~~~~~~lg~G~~g~Vy~~~~--------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~ 748 (973)
.++|...+.||+|+||.||+|+. ..+..||||+++... ....+.+.+|+++++++ +||||+++++++...
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 147 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 147 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccC
Confidence 45788889999999999999984 234689999997653 34457899999999999 899999999999999
Q ss_pred CeeEEEEEecCCCCHHHHhhhCC---------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEe
Q 048430 749 GFKALIMQYMPQGSLEKWLYSHN---------------YSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLL 813 (973)
Q Consensus 749 ~~~~lv~e~~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill 813 (973)
+..++||||+++|+|.+++.... ..+++.+++.++.|++.||+||| +.+|+||||||+||++
T Consensus 148 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll 224 (382)
T 3tt0_A 148 GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLV 224 (382)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEE
T ss_pred CceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCcceEEE
Confidence 99999999999999999998754 35899999999999999999999 7899999999999999
Q ss_pred CCCCcEEEeecccccccCCCCC-cccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCccccCcccH
Q 048430 814 DDDMVAHLGDFGIAKLLDGVDP-VTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFT-RRKPTNEMFTGEMSL 891 (973)
Q Consensus 814 ~~~~~~kl~Dfgla~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~ellt-g~~p~~~~~~~~~~~ 891 (973)
+.++.+||+|||+++....... .......+|+.|+|||.+.+..++.++|||||||++|||++ |+.||...... .+
T Consensus 225 ~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~--~~ 302 (382)
T 3tt0_A 225 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE--EL 302 (382)
T ss_dssp CTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--HH
T ss_pred cCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH--HH
Confidence 9999999999999987654332 22333457889999999988999999999999999999999 99998643211 11
Q ss_pred HHHHHhhCCcchhhhcccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHHHH
Q 048430 892 KQWVAESLPGAVTEVVDANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIKKIL 965 (973)
Q Consensus 892 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~~~~ 965 (973)
...+.... .. ..+..++.++.+++.+||+.||++||+++|++++|+++....
T Consensus 303 ~~~~~~~~------------~~----------~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 354 (382)
T 3tt0_A 303 FKLLKEGH------------RM----------DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALT 354 (382)
T ss_dssp HHHHHTTC------------CC----------CCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHS
T ss_pred HHHHHcCC------------CC----------CCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHH
Confidence 11111100 00 001124567899999999999999999999999999998654
No 89
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=5.9e-40 Score=379.35 Aligned_cols=257 Identities=25% Similarity=0.426 Sum_probs=210.8
Q ss_pred HhcCCCCCccccccCceEEEEEEeCCCeEEEEEEEeccchhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEEEEe
Q 048430 678 ATNGFGESNLLGSGSFDNVYKATLANGVSVAVKVFNLQEDRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALIMQY 757 (973)
Q Consensus 678 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 757 (973)
..++|...+.||+|+||.||+|...++..||||+++... ...+.|.+|+.++++++||||+++++++. .+..++||||
T Consensus 186 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~ 263 (454)
T 1qcf_A 186 PRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEF 263 (454)
T ss_dssp CGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECC
T ss_pred chHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEee
Confidence 446677889999999999999999889999999997543 34578999999999999999999999987 5678999999
Q ss_pred cCCCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCCCCc
Q 048430 758 MPQGSLEKWLYSHN-YSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGVDPV 836 (973)
Q Consensus 758 ~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 836 (973)
+++|+|.+++.... ..+++..+..++.||+.||+||| +++|+||||||+|||++.++.+||+|||+++........
T Consensus 264 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~ 340 (454)
T 1qcf_A 264 MAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYT 340 (454)
T ss_dssp CTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHH
T ss_pred cCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCcee
Confidence 99999999998542 35889999999999999999999 789999999999999999999999999999876432222
Q ss_pred ccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCccccCcccHHHHHHhhCCcchhhhcccccCCCC
Q 048430 837 TQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFT-RRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLLSRE 915 (973)
Q Consensus 837 ~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 915 (973)
......+|..|+|||.+....++.++|||||||++|||++ |+.||...... .....+... ..
T Consensus 341 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~--~~~~~i~~~------------~~--- 403 (454)
T 1qcf_A 341 AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP--EVIRALERG------------YR--- 403 (454)
T ss_dssp TTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--HHHHHHHHT------------CC---
T ss_pred ccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcC------------CC---
Confidence 2233456789999999988899999999999999999999 99998653211 111111110 00
Q ss_pred chhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHH
Q 048430 916 DEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIKK 963 (973)
Q Consensus 916 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~~ 963 (973)
...+..+++++.+++.+||+.||++|||++++++.|+.+..
T Consensus 404 -------~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~ 444 (454)
T 1qcf_A 404 -------MPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYT 444 (454)
T ss_dssp -------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSS
T ss_pred -------CCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHh
Confidence 01122456779999999999999999999999999987653
No 90
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.9e-39 Score=358.25 Aligned_cols=248 Identities=24% Similarity=0.370 Sum_probs=204.0
Q ss_pred hcCCCCCccccccCceEEEEEEe-CCCeEEEEEEEeccc---hhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEE
Q 048430 679 TNGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQE---DRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALI 754 (973)
Q Consensus 679 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 754 (973)
.++|...+.||+|+||.||+|+. .+++.||||++.... ....+.+.+|+.+++.++||||+++++++..++..++|
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 87 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMV 87 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 35788899999999999999995 678999999987542 22246789999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCCC
Q 048430 755 MQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGVD 834 (973)
Q Consensus 755 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 834 (973)
|||+ +|+|.+++.... .+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++......
T Consensus 88 ~E~~-~g~l~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~- 161 (336)
T 3h4j_B 88 IEYA-GGELFDYIVEKK-RMTEDEGRRFFQQIICAIEYCH---RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDG- 161 (336)
T ss_dssp ECCC-CEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTS-
T ss_pred EECC-CCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCchhhEEEcCCCCEEEEEeccceeccCC-
Confidence 9999 679999887765 6999999999999999999999 789999999999999999999999999999876432
Q ss_pred CcccccccccccccCccCCCCCCC-CcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhcccccCC
Q 048430 835 PVTQTMTLATIGYMAPEYGSEGIV-SISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLLS 913 (973)
Q Consensus 835 ~~~~~~~~~~~~y~aPE~~~~~~~-~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 913 (973)
.......||+.|+|||.+.+..+ +.++|||||||++|||++|+.||+....... ...+....
T Consensus 162 -~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~--------------~~~i~~~~-- 224 (336)
T 3h4j_B 162 -NFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNL--------------FKKVNSCV-- 224 (336)
T ss_dssp -BTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTC--------------BCCCCSSC--
T ss_pred -cccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHH--------------HHHHHcCC--
Confidence 22344579999999999887765 7899999999999999999999965321110 00000000
Q ss_pred CCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 048430 914 REDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADL 958 (973)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L 958 (973)
...+..+++++.+++.+||+.||++|||++|+++|=
T Consensus 225 ---------~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp 260 (336)
T 3h4j_B 225 ---------YVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRDP 260 (336)
T ss_dssp ---------CCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTCH
T ss_pred ---------CCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhCh
Confidence 001122456788999999999999999999999873
No 91
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.1e-38 Score=352.29 Aligned_cols=251 Identities=22% Similarity=0.317 Sum_probs=205.9
Q ss_pred cCCCCCccccccCceEEEEEEeC-CCeEEEEEEEeccchh------hHHHHHHHHHHHHhccCCceeEEEeeeecCCeeE
Q 048430 680 NGFGESNLLGSGSFDNVYKATLA-NGVSVAVKVFNLQEDR------ALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKA 752 (973)
Q Consensus 680 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 752 (973)
+.|...+.||+|+||.||+|... +++.||+|+++..... ..+.+.+|+.++++++||||+++++++.+....+
T Consensus 11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 90 (326)
T 2y0a_A 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI 90 (326)
T ss_dssp HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 45888899999999999999964 6899999998754321 3578999999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCC----cEEEeeccccc
Q 048430 753 LIMQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDM----VAHLGDFGIAK 828 (973)
Q Consensus 753 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~----~~kl~Dfgla~ 828 (973)
+||||+++|+|.+++.... .+++.++..++.|++.||.||| +.+|+||||||+||+++.++ .+||+|||+++
T Consensus 91 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~ 166 (326)
T 2y0a_A 91 LILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 166 (326)
T ss_dssp EEEECCCSCBHHHHHTTSS-CCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred EEEEcCCCCCHHHHHHhcC-CcCHHHHHHHHHHHHHHHHHHH---HCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCe
Confidence 9999999999999997654 7999999999999999999999 79999999999999999887 89999999998
Q ss_pred ccCCCCCcccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhcc
Q 048430 829 LLDGVDPVTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVD 908 (973)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d 908 (973)
...... ......||+.|+|||.+....++.++|||||||++|||++|+.||......+ ....+......
T Consensus 167 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~--~~~~~~~~~~~------- 235 (326)
T 2y0a_A 167 KIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE--TLANVSAVNYE------- 235 (326)
T ss_dssp ECCTTS--CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH--HHHHHHHTCCC-------
T ss_pred ECCCCC--ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH--HHHHHHhcCCC-------
Confidence 764322 2234569999999999988899999999999999999999999986532111 11111100000
Q ss_pred cccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 909 ANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 909 ~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
.. ......++..+.+++.+||+.||++|||+.|+++|
T Consensus 236 ------~~------~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 272 (326)
T 2y0a_A 236 ------FE------DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272 (326)
T ss_dssp ------CC------HHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred ------cC------ccccccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 00 01112345678899999999999999999999986
No 92
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=1.4e-37 Score=361.49 Aligned_cols=346 Identities=29% Similarity=0.459 Sum_probs=202.9
Q ss_pred cccCCcEEEccCCCCCCCCCccccCCCCCccEEEeeCcccCCCCCccccCCCCCCeEEccCccccccCCccccCCCCCcc
Q 048430 91 HMRRLKIIDFSSNSLSGSLPGDMCNSFTQLESFDVSSNKITGEFPSAIVNISSLKSIRLDNNSLSGSFPTDLCTRLPSLV 170 (973)
Q Consensus 91 ~l~~L~~L~Ls~n~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~ 170 (973)
.+++|+.|++++|.+. .+|. +..+++|++|||++|.+++. |. +.++++|++|++++|+++ .++. +..+++|+
T Consensus 44 ~l~~l~~L~l~~~~i~-~l~~--~~~l~~L~~L~Ls~n~l~~~-~~-~~~l~~L~~L~l~~n~l~-~~~~--~~~l~~L~ 115 (466)
T 1o6v_A 44 DLDQVTTLQADRLGIK-SIDG--VEYLNNLTQINFSNNQLTDI-TP-LKNLTKLVDILMNNNQIA-DITP--LANLTNLT 115 (466)
T ss_dssp HHHTCCEEECCSSCCC-CCTT--GGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCC-CCGG--GTTCTTCC
T ss_pred HhccccEEecCCCCCc-cCcc--hhhhcCCCEEECCCCccCCc-hh-hhccccCCEEECCCCccc-cChh--hcCCCCCC
Confidence 3555666666666655 4443 34455566666666655533 22 555555555555555555 2222 33444444
Q ss_pred EEEcccccccccCCCCCCCccccCCCCccEEEecCCcccCccccccccCCcceeEEeecccccccCCCCCCccccceeee
Q 048430 171 QLRLLGNNITGRIPNREIPNEIGNLHNLKILDLGGNNIAGLIPSMIFNNSNMVAILLYGNHLSGHLPSSIYLPNLENLFL 250 (973)
Q Consensus 171 ~L~L~~N~l~~~~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L 250 (973)
+|+|++|++++ +|. ++++++|++|++++|+++
T Consensus 116 ~L~L~~n~l~~------~~~-~~~l~~L~~L~l~~n~l~----------------------------------------- 147 (466)
T 1o6v_A 116 GLTLFNNQITD------IDP-LKNLTNLNRLELSSNTIS----------------------------------------- 147 (466)
T ss_dssp EEECCSSCCCC------CGG-GTTCTTCSEEEEEEEEEC-----------------------------------------
T ss_pred EEECCCCCCCC------ChH-HcCCCCCCEEECCCCccC-----------------------------------------
Confidence 44444444431 111 344444444444444443
Q ss_pred ccccccccCcchhcccCcccEEEeccccccccCCCcccccccceEEEccCCcCCCCCCCcchhhhhhhccCCcCcEEEcc
Q 048430 251 WKNNLSGIIPDSICNASEATILELSSNLFSGLVPNTFGNCRQLQILSLGDNQLTTGSSAQGQIFYSSLAKCRYLRVLVLD 330 (973)
Q Consensus 251 ~~N~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~L~~L~L~ 330 (973)
+. + .+..+++|+.|+++ |.+.+..+ +.++++|++|++++|+++.. ..+..+++|+.|+++
T Consensus 148 ------~~-~-~~~~l~~L~~L~l~-~~~~~~~~--~~~l~~L~~L~l~~n~l~~~---------~~l~~l~~L~~L~l~ 207 (466)
T 1o6v_A 148 ------DI-S-ALSGLTSLQQLSFG-NQVTDLKP--LANLTTLERLDISSNKVSDI---------SVLAKLTNLESLIAT 207 (466)
T ss_dssp ------CC-G-GGTTCTTCSEEEEE-ESCCCCGG--GTTCTTCCEEECCSSCCCCC---------GGGGGCTTCSEEECC
T ss_pred ------CC-h-hhccCCcccEeecC-CcccCchh--hccCCCCCEEECcCCcCCCC---------hhhccCCCCCEEEec
Confidence 21 1 23344444444443 22322221 44555555555555555431 124445555555555
Q ss_pred CCCCCCCCCCcccccccccceeecccCCccccCCCCCCCCCcccEEEeecCccccccCcccCCCCCCCEEEccCCcCCCC
Q 048430 331 TNPLKGVIPNSIGNLSTSLENFYAGSSQLSGGIPVGFGNLSNLLVLSLVNNELAGAIPTVLGKLQKLQGLDLNSNKLKGF 410 (973)
Q Consensus 331 ~N~l~~~~p~~~~~l~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 410 (973)
+|.+.+..| ++.+++|++|++++|++++. ..+..+++|++|++++|++.+.
T Consensus 208 ~n~l~~~~~---------------------------~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~ 258 (466)
T 1o6v_A 208 NNQISDITP---------------------------LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNL 258 (466)
T ss_dssp SSCCCCCGG---------------------------GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCC
T ss_pred CCccccccc---------------------------ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccc
Confidence 555543221 33456777777777777643 3567788888888888888865
Q ss_pred CchhhhccCcCCeeecCCccccCcCcccccCcCCCCeeeccCCCCCCCCcccccccccccEEEecCCcccCCcCcCccCC
Q 048430 411 IPTDLCKLEKLNTLLSNNNALQGQIPTCLANLTSLRHLDFRSNSLNSTIPSTFWSLKYILAVDFSLNSLSGSLPLNIGNL 490 (973)
Q Consensus 411 ~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l 490 (973)
.+ +..+++|+.|++++|.+++..+ +..+++|+.|++++|++.+..+ +..+++|+.|++++|++++..| +..+
T Consensus 259 ~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l 330 (466)
T 1o6v_A 259 AP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSL 330 (466)
T ss_dssp GG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGC
T ss_pred hh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccC
Confidence 44 7777888888888888776544 6777778888888887776444 6677777777777777776554 5667
Q ss_pred CCCCeEEccCCcCcccCCcccccCCcCCEEEcccCccccCCCCCcccccccccccccccccCC
Q 048430 491 EALGGLNLTGNQLSGYIPSSIGNLKNLDWLALARNAFQGPIPQSFGSLISLQSLDLSGNNISG 553 (973)
Q Consensus 491 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 553 (973)
++|+.|++++|++++. ..+..+++|+.|++++|++++..| +..+++|+.|++++|++++
T Consensus 331 ~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~~~~ 389 (466)
T 1o6v_A 331 TKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTN 389 (466)
T ss_dssp TTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG--GTTCTTCCEEECCCEEEEC
T ss_pred ccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCccCccch--hhcCCCCCEEeccCCcccC
Confidence 7777777777777643 356677777777777777776665 6677777777777777765
No 93
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.5e-39 Score=365.22 Aligned_cols=260 Identities=23% Similarity=0.379 Sum_probs=209.8
Q ss_pred cCCCCCccccccCceEEEEEEeC------CCeEEEEEEEecc-chhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeE
Q 048430 680 NGFGESNLLGSGSFDNVYKATLA------NGVSVAVKVFNLQ-EDRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKA 752 (973)
Q Consensus 680 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 752 (973)
++|...+.||+|+||.||+|++. +++.||||+++.. .......+.+|+.++++++||||+++++++.+....+
T Consensus 71 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 150 (367)
T 3l9p_A 71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRF 150 (367)
T ss_dssp GGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred hHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCE
Confidence 56788899999999999999843 4678999998654 2344567889999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHhhhCC------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCC---cEEEee
Q 048430 753 LIMQYMPQGSLEKWLYSHN------YSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDM---VAHLGD 823 (973)
Q Consensus 753 lv~e~~~~gsL~~~l~~~~------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~---~~kl~D 823 (973)
+||||+++|+|.+++.... ..+++.+++.++.||+.||+||| +.+|+||||||+||+++.++ .+||+|
T Consensus 151 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~~~~kL~D 227 (367)
T 3l9p_A 151 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGD 227 (367)
T ss_dssp EEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEECC
T ss_pred EEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChhhEEEecCCCCceEEECC
Confidence 9999999999999998643 45899999999999999999999 79999999999999999555 599999
Q ss_pred cccccccCCCCC-cccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCccccCcccHHHHHHhhCCc
Q 048430 824 FGIAKLLDGVDP-VTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFT-RRKPTNEMFTGEMSLKQWVAESLPG 901 (973)
Q Consensus 824 fgla~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 901 (973)
||+++....... .......+|+.|+|||.+.+..++.++|||||||++|||++ |+.||..... ..+...+.....
T Consensus 228 FG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~--~~~~~~i~~~~~- 304 (367)
T 3l9p_A 228 FGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN--QEVLEFVTSGGR- 304 (367)
T ss_dssp CHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH--HHHHHHHHTTCC-
T ss_pred CccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHHcCCC-
Confidence 999975432111 22234568899999999888899999999999999999998 9999865321 111111111000
Q ss_pred chhhhcccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHHHHH
Q 048430 902 AVTEVVDANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIKKILT 966 (973)
Q Consensus 902 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~~~~~ 966 (973)
...+..++..+.+++.+||+.+|++||+++|++++|+.+.+...
T Consensus 305 ---------------------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~~ 348 (367)
T 3l9p_A 305 ---------------------MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPD 348 (367)
T ss_dssp ---------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCHH
T ss_pred ---------------------CCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhChh
Confidence 00112345668899999999999999999999999999876543
No 94
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=4.5e-39 Score=361.58 Aligned_cols=270 Identities=17% Similarity=0.167 Sum_probs=209.1
Q ss_pred HhcCCCCCccccccCceEEEEEEeCC------CeEEEEEEEeccchhh-----------HHHHHHHHHHHHhccCCceeE
Q 048430 678 ATNGFGESNLLGSGSFDNVYKATLAN------GVSVAVKVFNLQEDRA-----------LKSFDTECEVMRRIRHRNLIK 740 (973)
Q Consensus 678 ~~~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~-----------~~~~~~e~~~l~~l~h~niv~ 740 (973)
..++|...+.||+|+||.||+|.... ++.||||++....... ...+..|+..++.++||||++
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~ 112 (364)
T 3op5_A 33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK 112 (364)
T ss_dssp TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence 34578889999999999999998754 4789999987553211 123345566677778999999
Q ss_pred EEeeeecC----CeeEEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeC--
Q 048430 741 IVSSCSNP----GFKALIMQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLD-- 814 (973)
Q Consensus 741 l~~~~~~~----~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~-- 814 (973)
+++++... ...++||||+ +++|.+++......+++.++..++.||+.||+||| +.+|+||||||+||+++
T Consensus 113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH---~~~iiHrDlkp~Nill~~~ 188 (364)
T 3op5_A 113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIH---EHEYVHGDIKASNLLLNYK 188 (364)
T ss_dssp EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEESS
T ss_pred EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeEEecCCHHHEEEecC
Confidence 99998654 5589999999 99999999887668999999999999999999999 78999999999999999
Q ss_pred CCCcEEEeecccccccCCCCCc------ccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCc
Q 048430 815 DDMVAHLGDFGIAKLLDGVDPV------TQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGE 888 (973)
Q Consensus 815 ~~~~~kl~Dfgla~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~ 888 (973)
.++.+||+|||+++........ ......||+.|+|||.+.+..++.++|||||||++|||++|+.||.......
T Consensus 189 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~ 268 (364)
T 3op5_A 189 NPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDP 268 (364)
T ss_dssp CTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCH
T ss_pred CCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCH
Confidence 8899999999999876432111 1133459999999999999899999999999999999999999997533222
Q ss_pred ccHHHHHHhhCCcchhhhcccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHHHH
Q 048430 889 MSLKQWVAESLPGAVTEVVDANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIKKIL 965 (973)
Q Consensus 889 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~~~~ 965 (973)
...............++.++.+. ...++.++.+++..||+.+|++||+++++++.|+++.+..
T Consensus 269 -~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~ 331 (364)
T 3op5_A 269 -KYVRDSKIRYRENIASLMDKCFP-------------AANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAI 331 (364)
T ss_dssp -HHHHHHHHHHHHCHHHHHHHHSC-------------TTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred -HHHHHHHHHhhhhHHHHHHHhcc-------------cccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHc
Confidence 12222222111222222222111 0234677999999999999999999999999999988764
No 95
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=1.4e-38 Score=364.38 Aligned_cols=254 Identities=21% Similarity=0.286 Sum_probs=206.0
Q ss_pred HhcCCCCCccccccCceEEEEEEe-CCCeEEEEEEEeccc--hhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEE
Q 048430 678 ATNGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQE--DRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALI 754 (973)
Q Consensus 678 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 754 (973)
..++|...+.||+|+||.||+|.. .+|+.||+|++.... ....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv 88 (444)
T 3soa_A 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLI 88 (444)
T ss_dssp HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEE
T ss_pred ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEE
Confidence 456788999999999999999985 579999999987553 33456789999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeC---CCCcEEEeecccccccC
Q 048430 755 MQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLD---DDMVAHLGDFGIAKLLD 831 (973)
Q Consensus 755 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~---~~~~~kl~Dfgla~~~~ 831 (973)
|||+++|+|.+++.... .+++..+..++.||+.||+||| +.+|+||||||+||+++ .++.+||+|||++....
T Consensus 89 ~E~~~gg~L~~~i~~~~-~~~e~~~~~i~~qil~aL~~lH---~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~ 164 (444)
T 3soa_A 89 FDLVTGGELFEDIVARE-YYSEADASHCIQQILEAVLHCH---QMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVE 164 (444)
T ss_dssp ECCCBCCBHHHHHHHCS-CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCC
T ss_pred EEeCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEeccCCCCcEEEccCceeEEec
Confidence 99999999999998765 6999999999999999999999 78999999999999998 56789999999998765
Q ss_pred CCCCcccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhccccc
Q 048430 832 GVDPVTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANL 911 (973)
Q Consensus 832 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 911 (973)
... .......||+.|+|||.+....++.++||||+||++|+|++|+.||..... ......+......
T Consensus 165 ~~~-~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~--~~~~~~i~~~~~~---------- 231 (444)
T 3soa_A 165 GEQ-QAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQ--HRLYQQIKAGAYD---------- 231 (444)
T ss_dssp TTC-CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHHHHTCCC----------
T ss_pred CCC-ceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccH--HHHHHHHHhCCCC----------
Confidence 322 223345799999999999988999999999999999999999999865221 1111111110000
Q ss_pred CCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 912 LSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
. .. .....+++++.+++.+||+.||++|||++|+++|
T Consensus 232 -~-~~-------~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~h 268 (444)
T 3soa_A 232 -F-PS-------PEWDTVTPEAKDLINKMLTINPSKRITAAEALKH 268 (444)
T ss_dssp -C-CT-------TTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred -C-Cc-------cccccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 0 00 0011245678899999999999999999999986
No 96
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=1.6e-39 Score=362.77 Aligned_cols=265 Identities=23% Similarity=0.380 Sum_probs=212.6
Q ss_pred HHhcCCCCCccccccCceEEEEEEeC------CCeEEEEEEEeccc-hhhHHHHHHHHHHHHhccCCceeEEEeeeecCC
Q 048430 677 QATNGFGESNLLGSGSFDNVYKATLA------NGVSVAVKVFNLQE-DRALKSFDTECEVMRRIRHRNLIKIVSSCSNPG 749 (973)
Q Consensus 677 ~~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 749 (973)
...++|...+.||+|+||.||+|+.. +++.||||+++... ....+.+.+|+.++++++||||+++++++.+.+
T Consensus 44 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~ 123 (343)
T 1luf_A 44 YPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGK 123 (343)
T ss_dssp CCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS
T ss_pred ecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCC
Confidence 34578889999999999999999864 45899999997653 344578999999999999999999999999999
Q ss_pred eeEEEEEecCCCCHHHHhhhCC-----------------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccC
Q 048430 750 FKALIMQYMPQGSLEKWLYSHN-----------------------YSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDL 806 (973)
Q Consensus 750 ~~~lv~e~~~~gsL~~~l~~~~-----------------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dl 806 (973)
..++||||+++|+|.+++.... ..+++.+++.++.||++||.||| +.+|+||||
T Consensus 124 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dl 200 (343)
T 1luf_A 124 PMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLS---ERKFVHRDL 200 (343)
T ss_dssp SCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCC
T ss_pred ceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCC
Confidence 9999999999999999998742 46899999999999999999999 789999999
Q ss_pred CCCcEEeCCCCcEEEeecccccccCCCCC-cccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCcc
Q 048430 807 KPNNVLLDDDMVAHLGDFGIAKLLDGVDP-VTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFT-RRKPTNEM 884 (973)
Q Consensus 807 k~~Nill~~~~~~kl~Dfgla~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~ellt-g~~p~~~~ 884 (973)
||+||+++.++.+||+|||+++....... .......+|+.|+|||.+....++.++|||||||++|||++ |+.||...
T Consensus 201 kp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~ 280 (343)
T 1luf_A 201 ATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGM 280 (343)
T ss_dssp SGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTS
T ss_pred CcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCC
Confidence 99999999999999999999986543221 12234468899999999888889999999999999999999 99998653
Q ss_pred ccCcccHHHHHHhhCCcchhhhcccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHHH
Q 048430 885 FTGEMSLKQWVAESLPGAVTEVVDANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIKKI 964 (973)
Q Consensus 885 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~~~ 964 (973)
.. .........+. ... .+..++.++.+++.+||+.||++||++.|++++|+++.+.
T Consensus 281 ~~-----~~~~~~~~~~~--------~~~-----------~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~ 336 (343)
T 1luf_A 281 AH-----EEVIYYVRDGN--------ILA-----------CPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCER 336 (343)
T ss_dssp CH-----HHHHHHHHTTC--------CCC-----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC-
T ss_pred Ch-----HHHHHHHhCCC--------cCC-----------CCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhh
Confidence 21 11111111110 000 1123456789999999999999999999999999998876
Q ss_pred HHhh
Q 048430 965 LTQA 968 (973)
Q Consensus 965 ~~~~ 968 (973)
....
T Consensus 337 ~~~~ 340 (343)
T 1luf_A 337 AEGT 340 (343)
T ss_dssp ----
T ss_pred hhhh
Confidence 6543
No 97
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=8.8e-39 Score=347.86 Aligned_cols=273 Identities=19% Similarity=0.233 Sum_probs=206.9
Q ss_pred cCCCCCccccccCceEEEEEEeC-CCeEEEEEEEeccc--hhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEEEE
Q 048430 680 NGFGESNLLGSGSFDNVYKATLA-NGVSVAVKVFNLQE--DRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALIMQ 756 (973)
Q Consensus 680 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 756 (973)
++|...+.||+|+||+||+|+.. +++.||||+++... ....+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 57888999999999999999964 68999999997543 3345778899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCCCCc
Q 048430 757 YMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGVDPV 836 (973)
Q Consensus 757 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 836 (973)
|+++ ++.+++......+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++..... ..
T Consensus 82 ~~~~-~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH---~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~-~~ 156 (292)
T 3o0g_A 82 FCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH---SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIP-VR 156 (292)
T ss_dssp CCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCSC-CS
T ss_pred cCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeecccceecCCc-cc
Confidence 9975 777777765568999999999999999999999 789999999999999999999999999999876432 22
Q ss_pred ccccccccccccCccCCCCCC-CCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCC---cchhhhccc-cc
Q 048430 837 TQTMTLATIGYMAPEYGSEGI-VSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLP---GAVTEVVDA-NL 911 (973)
Q Consensus 837 ~~~~~~~~~~y~aPE~~~~~~-~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~d~-~l 911 (973)
......+|+.|+|||.+.+.. ++.++|||||||++|||++|+.||.........+......... ..+....+. ..
T Consensus 157 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 236 (292)
T 3o0g_A 157 CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDY 236 (292)
T ss_dssp CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTC
T ss_pred cccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccccc
Confidence 334457899999999877655 8999999999999999999998864332222222222222111 111110000 00
Q ss_pred CCCC-chhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 912 LSRE-DEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 912 ~~~~-~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
.... .............++.++.+++.+|++.||++|||++|+++|
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 283 (292)
T 3o0g_A 237 KPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH 283 (292)
T ss_dssp CCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred cccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 0000 000000001112345678899999999999999999999976
No 98
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=2e-39 Score=378.39 Aligned_cols=256 Identities=23% Similarity=0.398 Sum_probs=212.5
Q ss_pred hcCCCCCccccccCceEEEEEEeC-CCeEEEEEEEeccchhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEEEEe
Q 048430 679 TNGFGESNLLGSGSFDNVYKATLA-NGVSVAVKVFNLQEDRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALIMQY 757 (973)
Q Consensus 679 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 757 (973)
..+|...+.||+|+||.||+|+.. ++..||||+++... ...+.|.+|+.++++++||||++++++|...+..++||||
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~ 297 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF 297 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEc
Confidence 356777899999999999999976 48999999987543 2357899999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCCCCc
Q 048430 758 MPQGSLEKWLYSHN-YSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGVDPV 836 (973)
Q Consensus 758 ~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 836 (973)
+++|+|.+++.... ..+++..+..++.||+.||+||| +++|+||||||+||+++.++.+||+|||+++........
T Consensus 298 ~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~ 374 (495)
T 1opk_A 298 MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYT 374 (495)
T ss_dssp CTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEE
T ss_pred cCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChhhEEECCCCcEEEeecccceeccCCcee
Confidence 99999999998743 46899999999999999999999 799999999999999999999999999999876543333
Q ss_pred ccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCccccCcccHHHHHHhhCCcchhhhcccccCCCC
Q 048430 837 TQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFT-RRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLLSRE 915 (973)
Q Consensus 837 ~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 915 (973)
......++..|+|||.+....++.++|||||||++|||++ |+.||...... .+...+.. ...
T Consensus 375 ~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~--~~~~~~~~------------~~~--- 437 (495)
T 1opk_A 375 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QVYELLEK------------DYR--- 437 (495)
T ss_dssp CCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--GHHHHHHT------------TCC---
T ss_pred ecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHc------------CCC---
Confidence 3334457789999999888889999999999999999999 99998653221 12221111 110
Q ss_pred chhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHH
Q 048430 916 DEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIK 962 (973)
Q Consensus 916 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~ 962 (973)
...+..+++++.+++.+||+.||++||++.|+++.|+.+.
T Consensus 438 -------~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~ 477 (495)
T 1opk_A 438 -------MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 477 (495)
T ss_dssp -------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred -------CCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHH
Confidence 0112245677999999999999999999999999998753
No 99
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=5.5e-39 Score=348.63 Aligned_cols=269 Identities=21% Similarity=0.263 Sum_probs=204.6
Q ss_pred cCCCCCccccccCceEEEEEEeCCCeEEEEEEEeccch--hhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEEEEe
Q 048430 680 NGFGESNLLGSGSFDNVYKATLANGVSVAVKVFNLQED--RALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALIMQY 757 (973)
Q Consensus 680 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 757 (973)
++|...+.||+|+||.||+|+..+++.||+|++..... ...+.+.+|+.++++++||||+++++++...+..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 56888999999999999999998899999999865432 2346788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCCCCcc
Q 048430 758 MPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGVDPVT 837 (973)
Q Consensus 758 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~ 837 (973)
+++ +|.+++......+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++...... ..
T Consensus 82 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~ 156 (288)
T 1ob3_A 82 LDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPV-RK 156 (288)
T ss_dssp CSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-----
T ss_pred cCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEEeECccccccCccc-cc
Confidence 975 999999877668999999999999999999999 7899999999999999999999999999998764321 22
Q ss_pred cccccccccccCccCCCC-CCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCC---cchhhh-----cc
Q 048430 838 QTMTLATIGYMAPEYGSE-GIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLP---GAVTEV-----VD 908 (973)
Q Consensus 838 ~~~~~~~~~y~aPE~~~~-~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~-----~d 908 (973)
.....+|+.|+|||.+.+ ..++.++||||+||++|||++|+.||......+ .+......... ..+... .+
T Consensus 157 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (288)
T 1ob3_A 157 YTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEAD-QLMRIFRILGTPNSKNWPNVTELPKYD 235 (288)
T ss_dssp -----CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCTTTSTTGGGSTTCC
T ss_pred cccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHHCCCChhhchhhhcccccc
Confidence 334568999999998765 458999999999999999999999997532211 12222221111 001100 01
Q ss_pred cccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 909 ANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 909 ~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
+...... ..........+++++.+++.+||+.||++|||++|+++|
T Consensus 236 ~~~~~~~---~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 281 (288)
T 1ob3_A 236 PNFTVYE---PLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH 281 (288)
T ss_dssp TTCCCCC---CCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ccccccc---CccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 1110000 000000112345678899999999999999999999876
No 100
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=8.6e-39 Score=359.19 Aligned_cols=247 Identities=23% Similarity=0.346 Sum_probs=199.9
Q ss_pred CccccccCceEEEEEEe-CCCeEEEEEEEeccchhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEEEEecCCCCH
Q 048430 685 SNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQEDRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALIMQYMPQGSL 763 (973)
Q Consensus 685 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 763 (973)
.+.||+|+||.||+|+. .+|+.||+|+++.......+.+.+|++++++++||||+++++++.+.+..++||||+++|+|
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L 173 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGEL 173 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEE
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcH
Confidence 56899999999999985 57899999999876655667899999999999999999999999999999999999999999
Q ss_pred HHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEe--CCCCcEEEeecccccccCCCCCcccccc
Q 048430 764 EKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLL--DDDMVAHLGDFGIAKLLDGVDPVTQTMT 841 (973)
Q Consensus 764 ~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill--~~~~~~kl~Dfgla~~~~~~~~~~~~~~ 841 (973)
.+++......+++.++..++.||+.||+||| +.+|+||||||+||++ +.++.+||+|||+++...... .....
T Consensus 174 ~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~--~~~~~ 248 (373)
T 2x4f_A 174 FDRIIDESYNLTELDTILFMKQICEGIRHMH---QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE--KLKVN 248 (373)
T ss_dssp HHHHHHTGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTC--BCCCC
T ss_pred HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcc--ccccc
Confidence 9999876667999999999999999999999 7899999999999999 677899999999998765332 22345
Q ss_pred cccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhcccccCCCCchhhhh
Q 048430 842 LATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLLSREDEEDAD 921 (973)
Q Consensus 842 ~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 921 (973)
.||+.|+|||.+....++.++|||||||++|||++|+.||...... ..+......... . . .
T Consensus 249 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~-~~~~~i~~~~~~------------~-~-~---- 309 (373)
T 2x4f_A 249 FGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDA-ETLNNILACRWD------------L-E-D---- 309 (373)
T ss_dssp CSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHH-HHHHHHHHTCCC------------S-C-S----
T ss_pred cCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHhccCC------------C-C-h----
Confidence 6999999999998889999999999999999999999998653211 111111111000 0 0 0
Q ss_pred hHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 922 DFATKKTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 922 ~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
.....+++++.+++.+||+.||++||+++|+++|
T Consensus 310 --~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~h 343 (373)
T 2x4f_A 310 --EEFQDISEEAKEFISKLLIKEKSWRISASEALKH 343 (373)
T ss_dssp --GGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred --hhhccCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0011245678999999999999999999999986
No 101
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=8.2e-39 Score=356.99 Aligned_cols=267 Identities=25% Similarity=0.353 Sum_probs=210.9
Q ss_pred HHhcCCCCCccccccCceEEEEEEe------CCCeEEEEEEEeccc-hhhHHHHHHHHHHHHhc-cCCceeEEEeeeecC
Q 048430 677 QATNGFGESNLLGSGSFDNVYKATL------ANGVSVAVKVFNLQE-DRALKSFDTECEVMRRI-RHRNLIKIVSSCSNP 748 (973)
Q Consensus 677 ~~~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~ 748 (973)
...++|...+.||+|+||.||+|+. .+++.||||+++... ....+.+.+|+.+++++ +||||+++++++...
T Consensus 42 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 121 (344)
T 1rjb_A 42 FPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLS 121 (344)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred cCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeC
Confidence 3457888899999999999999985 246789999987543 33457899999999999 899999999999999
Q ss_pred CeeEEEEEecCCCCHHHHhhhCCC----------------------CCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccC
Q 048430 749 GFKALIMQYMPQGSLEKWLYSHNY----------------------SLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDL 806 (973)
Q Consensus 749 ~~~~lv~e~~~~gsL~~~l~~~~~----------------------~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dl 806 (973)
+..++||||+++|+|.+++..... .+++..+..++.||+.||+||| +.+|+||||
T Consensus 122 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Di 198 (344)
T 1rjb_A 122 GPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE---FKSCVHRDL 198 (344)
T ss_dssp SSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHH---HTTEEETTC
T ss_pred CccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCC
Confidence 999999999999999999987542 3789999999999999999999 799999999
Q ss_pred CCCcEEeCCCCcEEEeecccccccCCCCCc-ccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCcc
Q 048430 807 KPNNVLLDDDMVAHLGDFGIAKLLDGVDPV-TQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFT-RRKPTNEM 884 (973)
Q Consensus 807 k~~Nill~~~~~~kl~Dfgla~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~ellt-g~~p~~~~ 884 (973)
||+||+++.++.+||+|||++......... ......+|+.|+|||.+.+..++.++|||||||++|||+| |+.||...
T Consensus 199 kp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~ 278 (344)
T 1rjb_A 199 AARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGI 278 (344)
T ss_dssp SGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred ChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccC
Confidence 999999999999999999999866433222 2334567889999999888889999999999999999998 99998664
Q ss_pred ccCcccHHHHHHhhCCcchhhhcccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHHH
Q 048430 885 FTGEMSLKQWVAESLPGAVTEVVDANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIKKI 964 (973)
Q Consensus 885 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~~~ 964 (973)
... ......+..... . ..+..+++++.+++.+||+.||++||++.|++++|+.+.+.
T Consensus 279 ~~~-~~~~~~~~~~~~------------~----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 335 (344)
T 1rjb_A 279 PVD-ANFYKLIQNGFK------------M----------DQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLAD 335 (344)
T ss_dssp CCS-HHHHHHHHTTCC------------C----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred CcH-HHHHHHHhcCCC------------C----------CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence 322 112222211100 0 00112356789999999999999999999999999999887
Q ss_pred HHhhc
Q 048430 965 LTQAL 969 (973)
Q Consensus 965 ~~~~~ 969 (973)
..++.
T Consensus 336 ~~~~~ 340 (344)
T 1rjb_A 336 AEEAM 340 (344)
T ss_dssp -----
T ss_pred HHHHH
Confidence 66543
No 102
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=1.1e-38 Score=356.96 Aligned_cols=253 Identities=21% Similarity=0.331 Sum_probs=206.5
Q ss_pred HhcCCCCCccccccCceEEEEEEeC-CCeEEEEEEEeccc--hhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEE
Q 048430 678 ATNGFGESNLLGSGSFDNVYKATLA-NGVSVAVKVFNLQE--DRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALI 754 (973)
Q Consensus 678 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 754 (973)
..++|...+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 27 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv 106 (362)
T 2bdw_A 27 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 106 (362)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 3467889999999999999999864 68999999997543 33456789999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCC---cEEEeecccccccC
Q 048430 755 MQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDM---VAHLGDFGIAKLLD 831 (973)
Q Consensus 755 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~---~~kl~Dfgla~~~~ 831 (973)
|||+++|+|.+++.... .+++.++..++.||+.||+||| +.+|+||||||+||+++.++ .+||+|||++....
T Consensus 107 ~e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~ 182 (362)
T 2bdw_A 107 FDLVTGGELFEDIVARE-FYSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN 182 (362)
T ss_dssp ECCCCSCBHHHHHTTCS-CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCT
T ss_pred EecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCchHHEEEecCCCCCCEEEeecCcceEec
Confidence 99999999999998654 7899999999999999999999 78999999999999998654 59999999998765
Q ss_pred CCCCcccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhccccc
Q 048430 832 GVDPVTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANL 911 (973)
Q Consensus 832 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 911 (973)
... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||..... ..+...+.... .
T Consensus 183 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~--~~~~~~i~~~~-----------~ 247 (362)
T 2bdw_A 183 DSE--AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ--HRLYAQIKAGA-----------Y 247 (362)
T ss_dssp TCC--SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHTC-----------C
T ss_pred CCc--ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH--HHHHHHHHhCC-----------C
Confidence 322 23345799999999999888999999999999999999999999865221 11111111100 0
Q ss_pred CCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 912 LSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
.. . . .....+++++.+++.+||+.||++||++.|+++|
T Consensus 248 ~~-~-~------~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 248 DY-P-S------PEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp CC-C-T------TGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred CC-C-c------ccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 00 0 0 0012345678999999999999999999999987
No 103
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=1.1e-38 Score=346.14 Aligned_cols=253 Identities=24% Similarity=0.422 Sum_probs=204.9
Q ss_pred hcCCCCCccccccCceEEEEEEe-CCCeEEEEEEEeccchh-------hHHHHHHHHHHHHhccCCceeEEEeeeecCCe
Q 048430 679 TNGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQEDR-------ALKSFDTECEVMRRIRHRNLIKIVSSCSNPGF 750 (973)
Q Consensus 679 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 750 (973)
.++|...+.||+|+||.||+|+. .+++.||||++...... ..+.+.+|+.++++++||||+++++++.+..
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 96 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP- 96 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence 35788889999999999999996 57899999998654321 1267899999999999999999999997665
Q ss_pred eEEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCC--eEEccCCCCcEEeCCCCc-----EEEee
Q 048430 751 KALIMQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTP--IIHCDLKPNNVLLDDDMV-----AHLGD 823 (973)
Q Consensus 751 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~--ivH~dlk~~Nill~~~~~-----~kl~D 823 (973)
++||||+++|+|.+++......+++..+..++.|++.||+||| +.+ |+||||||+||+++.++. +||+|
T Consensus 97 -~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~D 172 (287)
T 4f0f_A 97 -RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ---NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVAD 172 (287)
T ss_dssp -EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH---TSSSCCBCSCCSGGGEEESCCCTTCSCCEEECC
T ss_pred -eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHH---hCCCCeecCCCCcceEEEeccCCCCceeEEeCC
Confidence 6999999999999999877778999999999999999999999 788 999999999999988776 99999
Q ss_pred cccccccCCCCCcccccccccccccCccCC--CCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCc
Q 048430 824 FGIAKLLDGVDPVTQTMTLATIGYMAPEYG--SEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPG 901 (973)
Q Consensus 824 fgla~~~~~~~~~~~~~~~~~~~y~aPE~~--~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 901 (973)
||+++.... ......||+.|+|||.+ ....++.++|||||||++|||++|+.||.............+....
T Consensus 173 fg~~~~~~~----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~-- 246 (287)
T 4f0f_A 173 FGLSQQSVH----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEG-- 246 (287)
T ss_dssp CTTCBCCSS----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSC--
T ss_pred CCccccccc----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhccC--
Confidence 999975432 23345689999999987 4556789999999999999999999999764333222222211110
Q ss_pred chhhhcccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHH
Q 048430 902 AVTEVVDANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKI 961 (973)
Q Consensus 902 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~ 961 (973)
... ..+..+++++.+++.+||+.||++||+++|+++.|+++
T Consensus 247 ---------~~~----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 247 ---------LRP----------TIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp ---------CCC----------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred ---------CCC----------CCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 000 01123456789999999999999999999999999753
No 104
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=1.2e-38 Score=350.71 Aligned_cols=263 Identities=23% Similarity=0.365 Sum_probs=215.2
Q ss_pred HhcCCCCCccccccCceEEEEEEe------CCCeEEEEEEEeccch-hhHHHHHHHHHHHHhc-cCCceeEEEeeeecCC
Q 048430 678 ATNGFGESNLLGSGSFDNVYKATL------ANGVSVAVKVFNLQED-RALKSFDTECEVMRRI-RHRNLIKIVSSCSNPG 749 (973)
Q Consensus 678 ~~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~ 749 (973)
..++|...+.||+|+||.||+|+. .+++.||||+++.... ...+.+.+|+.+++++ +||||+++++++..++
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~ 100 (313)
T 1t46_A 21 PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGG 100 (313)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred ChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCC
Confidence 346788889999999999999984 3578999999975543 3457899999999999 8999999999999999
Q ss_pred eeEEEEEecCCCCHHHHhhhCCC-----------------CCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEE
Q 048430 750 FKALIMQYMPQGSLEKWLYSHNY-----------------SLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVL 812 (973)
Q Consensus 750 ~~~lv~e~~~~gsL~~~l~~~~~-----------------~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nil 812 (973)
..++||||+++|+|.+++..... .+++.++..++.|++.||+||| +.+|+||||||+||+
T Consensus 101 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil 177 (313)
T 1t46_A 101 PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNIL 177 (313)
T ss_dssp SCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEE
T ss_pred CcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCccceEE
Confidence 99999999999999999987542 4899999999999999999999 789999999999999
Q ss_pred eCCCCcEEEeecccccccCCCCCc-ccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCccccCccc
Q 048430 813 LDDDMVAHLGDFGIAKLLDGVDPV-TQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFT-RRKPTNEMFTGEMS 890 (973)
Q Consensus 813 l~~~~~~kl~Dfgla~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~ellt-g~~p~~~~~~~~~~ 890 (973)
++.++.+||+|||+++........ ......+|+.|+|||.+.+..++.++|||||||++|||++ |+.||....... .
T Consensus 178 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-~ 256 (313)
T 1t46_A 178 LTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS-K 256 (313)
T ss_dssp EETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSH-H
T ss_pred EcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchh-H
Confidence 999999999999999876543322 2234457889999999888899999999999999999999 999986543221 1
Q ss_pred HHHHHHhhCCcchhhhcccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHHHHH
Q 048430 891 LKQWVAESLPGAVTEVVDANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIKKILT 966 (973)
Q Consensus 891 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~~~~~ 966 (973)
....+..... .. .+..++.++.+++.+||+.||++||++.|++++|+++.....
T Consensus 257 ~~~~~~~~~~------------~~----------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 310 (313)
T 1t46_A 257 FYKMIKEGFR------------ML----------SPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISEST 310 (313)
T ss_dssp HHHHHHHTCC------------CC----------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTC
T ss_pred HHHHhccCCC------------CC----------CcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHhh
Confidence 2221111110 00 011235668999999999999999999999999999887543
No 105
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=6.7e-39 Score=346.76 Aligned_cols=261 Identities=21% Similarity=0.355 Sum_probs=208.9
Q ss_pred HhcCCCCCccccccCceEEEEEEeC----CCeEEEEEEEeccc-hhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeE
Q 048430 678 ATNGFGESNLLGSGSFDNVYKATLA----NGVSVAVKVFNLQE-DRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKA 752 (973)
Q Consensus 678 ~~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 752 (973)
..++|...+.||+|+||.||+|+.. ++..||||+++... ....+.+.+|+.++++++||||+++++++.+. ..+
T Consensus 10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~~~ 88 (281)
T 3cc6_A 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE-PTW 88 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS-SCE
T ss_pred cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCC-CCE
Confidence 3467888899999999999999853 23469999987653 34467899999999999999999999998754 568
Q ss_pred EEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCC
Q 048430 753 LIMQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDG 832 (973)
Q Consensus 753 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~ 832 (973)
+||||+++++|.+++......+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++.....
T Consensus 89 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 165 (281)
T 3cc6_A 89 IIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIED 165 (281)
T ss_dssp EEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEEEETTEEEECCCCGGGCC--
T ss_pred EEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCccceEEECCCCcEEeCccCCCccccc
Confidence 999999999999999877667999999999999999999999 79999999999999999999999999999987654
Q ss_pred CCCcccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCccccCcccHHHHHHhhCCcchhhhccccc
Q 048430 833 VDPVTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFT-RRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANL 911 (973)
Q Consensus 833 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 911 (973)
..........+++.|+|||......++.++||||||+++|||++ |+.||...... .....+......
T Consensus 166 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~--~~~~~~~~~~~~---------- 233 (281)
T 3cc6_A 166 EDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENK--DVIGVLEKGDRL---------- 233 (281)
T ss_dssp -------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGG--GHHHHHHHTCCC----------
T ss_pred ccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChH--HHHHHHhcCCCC----------
Confidence 33333344567889999999888889999999999999999998 99998653222 122211111000
Q ss_pred CCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHHHHH
Q 048430 912 LSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIKKILT 966 (973)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~~~~~ 966 (973)
..+..+++.+.+++.+||+.||++||++.|++++|+.+.+.-.
T Consensus 234 ------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~ 276 (281)
T 3cc6_A 234 ------------PKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQMEK 276 (281)
T ss_dssp ------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred ------------CCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHhhh
Confidence 0011245668899999999999999999999999999877543
No 106
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=5e-38 Score=367.05 Aligned_cols=213 Identities=21% Similarity=0.199 Sum_probs=108.7
Q ss_pred CCCCCcccEEEeecCccccccCcccCCCCCCCEEEccCCcCCCCCchhhhccCcCCeeecCCccccCcCcccccCcCCCC
Q 048430 367 FGNLSNLLVLSLVNNELAGAIPTVLGKLQKLQGLDLNSNKLKGFIPTDLCKLEKLNTLLSNNNALQGQIPTCLANLTSLR 446 (973)
Q Consensus 367 ~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~ 446 (973)
|..+++|++|++++|.+.+..+..|..+++|++|+|++|++++..+..+.++++|+.|++++|.+.+..+..|..+++|+
T Consensus 124 ~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~ 203 (477)
T 2id5_A 124 FQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLK 203 (477)
T ss_dssp TTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCC
T ss_pred ccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccc
Confidence 33344444444444444444444444444444444444444443334444444455555555544444444455555555
Q ss_pred eeeccCCCCCCCCcccccccccccEEEecCCcccCCcCcCccCCCCCCeEEccCCcCcccCCcccccCCcCCEEEcccCc
Q 048430 447 HLDFRSNSLNSTIPSTFWSLKYILAVDFSLNSLSGSLPLNIGNLEALGGLNLTGNQLSGYIPSSIGNLKNLDWLALARNA 526 (973)
Q Consensus 447 ~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 526 (973)
.|++++|.+.+.+|.......+|+.|++++|++++..+..+..+++|+.|+|++|++++..+..|..+++|+.|+|++|+
T Consensus 204 ~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~ 283 (477)
T 2id5_A 204 VLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQ 283 (477)
T ss_dssp EEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSC
T ss_pred eeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCc
Confidence 55555554444444444444455555555555553332345555555555555555554444455555555555555555
Q ss_pred cccCCCCCcccccccccccccccccCCCCCccccccccccccccCCCcccccC
Q 048430 527 FQGPIPQSFGSLISLQSLDLSGNNISGEIPKSLEKLSRLVDFNVSFNGLEGEI 579 (973)
Q Consensus 527 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~ 579 (973)
+++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|++++|++.+..
T Consensus 284 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~c 336 (477)
T 2id5_A 284 LAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDC 336 (477)
T ss_dssp CSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEECSG
T ss_pred cceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccCcc
Confidence 55555555555555555555555555544445555555555555555555443
No 107
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=4.4e-39 Score=362.04 Aligned_cols=255 Identities=22% Similarity=0.292 Sum_probs=203.3
Q ss_pred hcCCCCCccccccCceEEEEEEeC-CCeEEEEEEEeccc---hhhHHHHHHHHHHHHhc-cCCceeEEEeeeecCCeeEE
Q 048430 679 TNGFGESNLLGSGSFDNVYKATLA-NGVSVAVKVFNLQE---DRALKSFDTECEVMRRI-RHRNLIKIVSSCSNPGFKAL 753 (973)
Q Consensus 679 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 753 (973)
.++|...++||+|+||.||+|+.. +++.||||+++... ....+.+.+|..++.++ +||||+++++++.+.+..++
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 467888999999999999999964 68899999997552 23345688899999887 89999999999999999999
Q ss_pred EEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCC
Q 048430 754 IMQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGV 833 (973)
Q Consensus 754 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 833 (973)
||||+++|+|..++...+ .+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++.....
T Consensus 131 V~E~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH---~~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~ 206 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQRQR-KLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 206 (396)
T ss_dssp EEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred EEEcCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCEEeccCCHHHEEECCCCCEEEeecceeeecccC
Confidence 999999999999998765 7999999999999999999999 799999999999999999999999999999863322
Q ss_pred CCcccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCccc---HHHHHHhhCCcchhhhcccc
Q 048430 834 DPVTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMS---LKQWVAESLPGAVTEVVDAN 910 (973)
Q Consensus 834 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~~d~~ 910 (973)
.......+||+.|+|||.+.+..++.++|||||||++|||++|+.||......+.. ....+.. .+....
T Consensus 207 -~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~-------~i~~~~ 278 (396)
T 4dc2_A 207 -GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQ-------VILEKQ 278 (396)
T ss_dssp -TCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHH-------HHHHCC
T ss_pred -CCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHH-------HHhccc
Confidence 22334567999999999999999999999999999999999999999653221110 0000000 000000
Q ss_pred cCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCH------HHHHHH
Q 048430 911 LLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINV------KDALAD 957 (973)
Q Consensus 911 l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~------~evl~~ 957 (973)
. ..+..++.++.+++.+||+.||++||++ +|+++|
T Consensus 279 ~------------~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~H 319 (396)
T 4dc2_A 279 I------------RIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 319 (396)
T ss_dssp C------------CCCTTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHS
T ss_pred c------------CCCCcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcC
Confidence 0 0112245678899999999999999985 677665
No 108
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=1.5e-39 Score=361.82 Aligned_cols=250 Identities=23% Similarity=0.290 Sum_probs=201.2
Q ss_pred HhcCCCCCccccccCceEEEEEEeC-CCeEEEEEEEecc---chhhHHHHHHHHHHHHhc-cCCceeEEEeeeecCCeeE
Q 048430 678 ATNGFGESNLLGSGSFDNVYKATLA-NGVSVAVKVFNLQ---EDRALKSFDTECEVMRRI-RHRNLIKIVSSCSNPGFKA 752 (973)
Q Consensus 678 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~ 752 (973)
..++|...++||+|+||.||+|+.. +++.||||+++.. .....+.+.+|.++++.+ +||||+++++++.+.+..+
T Consensus 21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~ 100 (353)
T 3txo_A 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLF 100 (353)
T ss_dssp --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEE
Confidence 4578999999999999999999964 6899999999754 233456788999999988 6999999999999999999
Q ss_pred EEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCC
Q 048430 753 LIMQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDG 832 (973)
Q Consensus 753 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~ 832 (973)
+||||+++|+|.+++...+ .+++..++.++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++....
T Consensus 101 lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~ 176 (353)
T 3txo_A 101 FVMEFVNGGDLMFHIQKSR-RFDEARARFYAAEIISALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIC 176 (353)
T ss_dssp EEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC
T ss_pred EEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCcccCCCHHHEEECCCCCEEEccccceeeccc
Confidence 9999999999999998765 6999999999999999999999 78999999999999999999999999999985432
Q ss_pred CCCcccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhcccccC
Q 048430 833 VDPVTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLL 912 (973)
Q Consensus 833 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 912 (973)
........+||+.|+|||.+.+..++.++||||+||++|||++|+.||...... ...... ......
T Consensus 177 -~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~-----~~~~~i--------~~~~~~ 242 (353)
T 3txo_A 177 -NGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENED-----DLFEAI--------LNDEVV 242 (353)
T ss_dssp ----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHH-----HHHHHH--------HHCCCC
T ss_pred -CCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHH-----HHHHHH--------HcCCCC
Confidence 222334457999999999988888999999999999999999999999653211 111111 111000
Q ss_pred CCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCH------HHHHHH
Q 048430 913 SREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINV------KDALAD 957 (973)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~------~evl~~ 957 (973)
.+..++.++.+++.+|++.||++||++ +|+++|
T Consensus 243 ------------~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~h 281 (353)
T 3txo_A 243 ------------YPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRH 281 (353)
T ss_dssp ------------CCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTS
T ss_pred ------------CCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhhC
Confidence 011234568899999999999999998 778765
No 109
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=6.1e-39 Score=348.48 Aligned_cols=261 Identities=27% Similarity=0.456 Sum_probs=197.8
Q ss_pred HhcCCCCCccccccCceEEEEEEeCCCeEEEEEEEeccc--hhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEEE
Q 048430 678 ATNGFGESNLLGSGSFDNVYKATLANGVSVAVKVFNLQE--DRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALIM 755 (973)
Q Consensus 678 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 755 (973)
..++|...++||+|+||.||+|+... .||||+++... ....+.+.+|+.++++++||||+++++++. ....++||
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~~~~~~--~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~ 98 (289)
T 3og7_A 22 PDGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-APQLAIVT 98 (289)
T ss_dssp CTTSCEEEEEEEECSSEEEEEEESSS--EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEE
T ss_pred CccceeeeeEecCCCCeEEEEEEEcC--ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeecc-CCccEEEE
Confidence 34678889999999999999998653 59999987543 344578999999999999999999999764 55689999
Q ss_pred EecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCCC-
Q 048430 756 QYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGVD- 834 (973)
Q Consensus 756 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~- 834 (973)
||+++++|.+++......+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++.......
T Consensus 99 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 175 (289)
T 3og7_A 99 QWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSG 175 (289)
T ss_dssp ECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETTTEEEECCCC----------
T ss_pred EecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---hCCcccccCccceEEECCCCCEEEccceeccccccccc
Confidence 999999999999877778999999999999999999999 7899999999999999999999999999997654321
Q ss_pred CcccccccccccccCccCCC---CCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhccccc
Q 048430 835 PVTQTMTLATIGYMAPEYGS---EGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANL 911 (973)
Q Consensus 835 ~~~~~~~~~~~~y~aPE~~~---~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 911 (973)
........||+.|+|||.+. ...++.++|||||||++|||++|+.||......+ .....+...... +..
T Consensus 176 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-~~~~~~~~~~~~-------~~~ 247 (289)
T 3og7_A 176 SHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD-QIIEMVGRGSLS-------PDL 247 (289)
T ss_dssp --------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHH-HHHHHHHHTSCC-------CCT
T ss_pred cccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHH-HHHHHhcccccC-------cch
Confidence 22223456899999999775 6678999999999999999999999996533221 122222111100 000
Q ss_pred CCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHH
Q 048430 912 LSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIKK 963 (973)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~~ 963 (973)
.. ....+++++.+++.+||+.+|++||+++|+++.|+++.+
T Consensus 248 ~~-----------~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 248 SK-----------VRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp TS-----------SCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred hh-----------ccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 00 012345679999999999999999999999999998753
No 110
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=2.1e-37 Score=356.97 Aligned_cols=356 Identities=19% Similarity=0.226 Sum_probs=249.8
Q ss_pred CCcEEEEecCCCCCCCcCCCCCCCCCCCcEEEecCCCCCCCCCcccccccCCcEEEccCCCCCCCCCccccCCCCCccEE
Q 048430 44 HGRVAALSLPNLSLGGTLPPHVGNLSFLVSLNISGNSFYDTLPNELWHMRRLKIIDFSSNSLSGSLPGDMCNSFTQLESF 123 (973)
Q Consensus 44 ~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~~l~~L~~L 123 (973)
-.+++.|+++++.+++. | .++.+++|++|+|++|++.+ +| ++.+++|++|+|++|++++ +| ++.+++|++|
T Consensus 41 l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~-~~--~~~l~~L~~L~Ls~N~l~~-~~---~~~l~~L~~L 111 (457)
T 3bz5_A 41 LATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITT-LD--LSQNTNLTYLACDSNKLTN-LD---VTPLTKLTYL 111 (457)
T ss_dssp HTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSC-CC---CTTCTTCCEE
T ss_pred cCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCe-Ec--cccCCCCCEEECcCCCCce-ee---cCCCCcCCEE
Confidence 35799999999999974 5 79999999999999999976 44 9999999999999999995 55 6889999999
Q ss_pred EeeCcccCCCCCccccCCCCCCeEEccCccccccCCccccCCCCCccEEEcccccccccCCCCCCCccccCCCCccEEEe
Q 048430 124 DVSSNKITGEFPSAIVNISSLKSIRLDNNSLSGSFPTDLCTRLPSLVQLRLLGNNITGRIPNREIPNEIGNLHNLKILDL 203 (973)
Q Consensus 124 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~p~~l~~l~~L~~L~L 203 (973)
++++|++++ +| ++++++|++|++++|++++ ++ +..+++|++|++++|+..+. + .++.+++|++|++
T Consensus 112 ~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~-l~---l~~l~~L~~L~l~~n~~~~~-----~--~~~~l~~L~~L~l 177 (457)
T 3bz5_A 112 NCDTNKLTK-LD--VSQNPLLTYLNCARNTLTE-ID---VSHNTQLTELDCHLNKKITK-----L--DVTPQTQLTTLDC 177 (457)
T ss_dssp ECCSSCCSC-CC--CTTCTTCCEEECTTSCCSC-CC---CTTCTTCCEEECTTCSCCCC-----C--CCTTCTTCCEEEC
T ss_pred ECCCCcCCe-ec--CCCCCcCCEEECCCCccce-ec---cccCCcCCEEECCCCCcccc-----c--ccccCCcCCEEEC
Confidence 999999996 55 8999999999999999994 54 56899999999999965543 2 3788999999999
Q ss_pred cCCcccCccccccccCCcceeEEeecccccccCCCCCCccccceeeeccccccccCcchhcccCcccEEEeccccccccC
Q 048430 204 GGNNIAGLIPSMIFNNSNMVAILLYGNHLSGHLPSSIYLPNLENLFLWKNNLSGIIPDSICNASEATILELSSNLFSGLV 283 (973)
Q Consensus 204 ~~N~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~ 283 (973)
++|++++. | +.. +++|++|++++|++++. .++.+++|+.|++++|+++++
T Consensus 178 s~n~l~~l-~--l~~-----------------------l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~i- 227 (457)
T 3bz5_A 178 SFNKITEL-D--VSQ-----------------------NKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTEI- 227 (457)
T ss_dssp CSSCCCCC-C--CTT-----------------------CTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSCC-
T ss_pred CCCcccee-c--ccc-----------------------CCCCCEEECcCCcCCee---ccccCCCCCEEECcCCccccc-
Confidence 99999964 3 444 45666666666666654 266677777777777777764
Q ss_pred CCcccccccceEEEccCCcCCCCCCCcchhhhhhhccCCcCcEEEccCCCCCCCCCCcccccccccceeecccCCccccC
Q 048430 284 PNTFGNCRQLQILSLGDNQLTTGSSAQGQIFYSSLAKCRYLRVLVLDTNPLKGVIPNSIGNLSTSLENFYAGSSQLSGGI 363 (973)
Q Consensus 284 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~l~~l~l~~n~l~~~~ 363 (973)
| ++.+++|+.|++++|++++.+ +..+++|+.|+++.|
T Consensus 228 p--~~~l~~L~~L~l~~N~l~~~~----------~~~l~~L~~L~l~~n------------------------------- 264 (457)
T 3bz5_A 228 D--VTPLTQLTYFDCSVNPLTELD----------VSTLSKLTTLHCIQT------------------------------- 264 (457)
T ss_dssp C--CTTCTTCSEEECCSSCCSCCC----------CTTCTTCCEEECTTC-------------------------------
T ss_pred C--ccccCCCCEEEeeCCcCCCcC----------HHHCCCCCEEeccCC-------------------------------
Confidence 3 667777777777777776522 122333333333322
Q ss_pred CCCCCCCCcccEEEeecCccccccCcccCCCCCCCEEEccCCcCCCCCchhhhccCcCCeeecCCccccCcCcccccCcC
Q 048430 364 PVGFGNLSNLLVLSLVNNELAGAIPTVLGKLQKLQGLDLNSNKLKGFIPTDLCKLEKLNTLLSNNNALQGQIPTCLANLT 443 (973)
Q Consensus 364 p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~ 443 (973)
+|+.|++++|.+.+.+| ++.+++|+.|++++|...+.+|. ...
T Consensus 265 --------------------------------~L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~---~~~ 307 (457)
T 3bz5_A 265 --------------------------------DLLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDC---QAA 307 (457)
T ss_dssp --------------------------------CCSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEEC---TTC
T ss_pred --------------------------------CCCEEECCCCccCCccc--ccccccCCEEECCCCcccceecc---CCC
Confidence 22333344444333333 23344444444444444444332 223
Q ss_pred CCCeeeccCCCCCCCCcccccccccccEEEecCCcccCCcCcCccCCCCCCeEEccCCcCcccCCcccccCCcCCEEEcc
Q 048430 444 SLRHLDFRSNSLNSTIPSTFWSLKYILAVDFSLNSLSGSLPLNIGNLEALGGLNLTGNQLSGYIPSSIGNLKNLDWLALA 523 (973)
Q Consensus 444 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 523 (973)
+|+.|++++| ++|+.|++++|++++ ++ ++++++|+.|++++|+|++ ++.|..|+++
T Consensus 308 ~L~~L~l~~~-------------~~L~~L~L~~N~l~~-l~--l~~l~~L~~L~l~~N~l~~--------l~~L~~L~l~ 363 (457)
T 3bz5_A 308 GITELDLSQN-------------PKLVYLYLNNTELTE-LD--VSHNTKLKSLSCVNAHIQD--------FSSVGKIPAL 363 (457)
T ss_dssp CCSCCCCTTC-------------TTCCEEECTTCCCSC-CC--CTTCTTCSEEECCSSCCCB--------CTTGGGSSGG
T ss_pred cceEechhhc-------------ccCCEEECCCCcccc-cc--cccCCcCcEEECCCCCCCC--------cccccccccc
Confidence 4555555444 356666666666665 32 6777777777777777774 2345566777
Q ss_pred cCccccCCCCCcccccccccccccccccCCCCCccccc
Q 048430 524 RNAFQGPIPQSFGSLISLQSLDLSGNNISGEIPKSLEK 561 (973)
Q Consensus 524 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 561 (973)
+|.++|. ..+..|+.++|++|+++|.+|..+..
T Consensus 364 ~n~l~g~-----~~~~~l~~l~l~~N~l~g~ip~~~~~ 396 (457)
T 3bz5_A 364 NNNFEAE-----GQTITMPKETLTNNSLTIAVSPDLLD 396 (457)
T ss_dssp GTSEEEE-----EEEEECCCBCCBTTBEEEECCTTCBC
T ss_pred CCcEEec-----ceeeecCccccccCcEEEEcChhHhc
Confidence 7877765 45667788888888888888766543
No 111
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=1.1e-38 Score=356.01 Aligned_cols=253 Identities=21% Similarity=0.297 Sum_probs=204.5
Q ss_pred hcCCCCCccccccCceEEEEEEe-CCCeEEEEEEEeccch-----hhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeE
Q 048430 679 TNGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQED-----RALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKA 752 (973)
Q Consensus 679 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 752 (973)
.++|...+.||+|+||.||+|.. .+++.||||++..... ...+.+.+|+.+++.++||||+++++++.+.+..+
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 102 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY 102 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 35688899999999999999985 4789999999865421 13577999999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHhhhC---CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCc---EEEeeccc
Q 048430 753 LIMQYMPQGSLEKWLYSH---NYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMV---AHLGDFGI 826 (973)
Q Consensus 753 lv~e~~~~gsL~~~l~~~---~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~---~kl~Dfgl 826 (973)
+||||+++|+|.+++... ...+++..+..++.||+.||+||| +.+|+||||||+||+++.++. +||+|||+
T Consensus 103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~ 179 (351)
T 3c0i_A 103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH---DNNIIHRDVKPHCVLLASKENSAPVKLGGFGV 179 (351)
T ss_dssp EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECSSSTTCCEEECCCTT
T ss_pred EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCChHHeEEecCCCCCcEEEecCcc
Confidence 999999999998888643 235899999999999999999999 789999999999999987654 99999999
Q ss_pred ccccCCCCCcccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhh
Q 048430 827 AKLLDGVDPVTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEV 906 (973)
Q Consensus 827 a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 906 (973)
+....... .......||+.|+|||.+....++.++|||||||++|||++|+.||.... ......+..
T Consensus 180 a~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~---~~~~~~i~~--------- 246 (351)
T 3c0i_A 180 AIQLGESG-LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTK---ERLFEGIIK--------- 246 (351)
T ss_dssp CEECCTTS-CBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSH---HHHHHHHHH---------
T ss_pred eeEecCCC-eeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcH---HHHHHHHHc---------
Confidence 98765322 22334579999999999998899999999999999999999999996521 111111100
Q ss_pred cccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 907 VDANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 907 ~d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
..... . ......++.++.+++.+||+.||++||++.|+++|
T Consensus 247 --~~~~~--~------~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h 287 (351)
T 3c0i_A 247 --GKYKM--N------PRQWSHISESAKDLVRRMLMLDPAERITVYEALNH 287 (351)
T ss_dssp --TCCCC--C------HHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred --CCCCC--C------ccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 00000 0 00112345678999999999999999999999976
No 112
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=8.3e-39 Score=352.13 Aligned_cols=260 Identities=25% Similarity=0.404 Sum_probs=213.1
Q ss_pred HhcCCCCCccccccCceEEEEEEe------CCCeEEEEEEEeccc-hhhHHHHHHHHHHHHhccCCceeEEEeeeecCCe
Q 048430 678 ATNGFGESNLLGSGSFDNVYKATL------ANGVSVAVKVFNLQE-DRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGF 750 (973)
Q Consensus 678 ~~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 750 (973)
..++|...+.||+|+||.||+|.. .+++.||||+++... ....+.+.+|++++++++||||+++++++.+.+.
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 100 (314)
T 2ivs_A 21 PRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGP 100 (314)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred chhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCc
Confidence 346788889999999999999985 345899999987543 3445789999999999999999999999999999
Q ss_pred eEEEEEecCCCCHHHHhhhCC-----------------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCC
Q 048430 751 KALIMQYMPQGSLEKWLYSHN-----------------------YSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLK 807 (973)
Q Consensus 751 ~~lv~e~~~~gsL~~~l~~~~-----------------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk 807 (973)
.++||||+++|+|.+++.... ..+++.++..++.|++.||+||| +.+|+|||||
T Consensus 101 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dik 177 (314)
T 2ivs_A 101 LLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLA---EMKLVHRDLA 177 (314)
T ss_dssp CEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHH---HTTEECCCCS
T ss_pred eEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHH---HCCCcccccc
Confidence 999999999999999998753 23899999999999999999999 7899999999
Q ss_pred CCcEEeCCCCcEEEeecccccccCCCCCc-ccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCccc
Q 048430 808 PNNVLLDDDMVAHLGDFGIAKLLDGVDPV-TQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFT-RRKPTNEMF 885 (973)
Q Consensus 808 ~~Nill~~~~~~kl~Dfgla~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~ellt-g~~p~~~~~ 885 (973)
|+||+++.++.+||+|||+++........ ......+|+.|+|||...+..++.++|||||||++|||++ |+.||....
T Consensus 178 p~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 257 (314)
T 2ivs_A 178 ARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIP 257 (314)
T ss_dssp GGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred hheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCC
Confidence 99999999999999999999876433322 2233457889999999888889999999999999999999 999986533
Q ss_pred cCcccHHHHHHhhCCcchhhhcccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHHH
Q 048430 886 TGEMSLKQWVAESLPGAVTEVVDANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIKKI 964 (973)
Q Consensus 886 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~~~ 964 (973)
.. .+...+...... ..+..+++++.+++.+||+.||++||+++|++++|+++.+.
T Consensus 258 ~~--~~~~~~~~~~~~----------------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 312 (314)
T 2ivs_A 258 PE--RLFNLLKTGHRM----------------------ERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVK 312 (314)
T ss_dssp GG--GHHHHHHTTCCC----------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred HH--HHHHHhhcCCcC----------------------CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhh
Confidence 21 122221111000 01123456789999999999999999999999999998753
No 113
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.1e-39 Score=365.69 Aligned_cols=261 Identities=20% Similarity=0.276 Sum_probs=208.9
Q ss_pred HHHHHHhcCCCCCccccccCceEEEEEEeC-CCeEEEEEEEeccc---hhhHHHHHHHHHHHHhccCCceeEEEeeeecC
Q 048430 673 HELQQATNGFGESNLLGSGSFDNVYKATLA-NGVSVAVKVFNLQE---DRALKSFDTECEVMRRIRHRNLIKIVSSCSNP 748 (973)
Q Consensus 673 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 748 (973)
++.....++|...++||+|+||.||+|+.. +++.||||+++... ....+.+.+|..++..++||||+++++++.+.
T Consensus 54 ~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~ 133 (412)
T 2vd5_A 54 KEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDE 133 (412)
T ss_dssp HHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECS
T ss_pred hhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeC
Confidence 444455688999999999999999999964 79999999997532 22345688999999999999999999999999
Q ss_pred CeeEEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeeccccc
Q 048430 749 GFKALIMQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAK 828 (973)
Q Consensus 749 ~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~ 828 (973)
+..|+||||+++|+|.+++...+..+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++
T Consensus 134 ~~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~giiHrDLKp~NILld~~g~vkL~DFGla~ 210 (412)
T 2vd5_A 134 NYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVH---RLGYVHRDIKPDNILLDRCGHIRLADFGSCL 210 (412)
T ss_dssp SEEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred CEEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecccCHHHeeecCCCCEEEeechhhe
Confidence 9999999999999999999876557999999999999999999999 7999999999999999999999999999998
Q ss_pred ccCCCCCcccccccccccccCccCCC-------CCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCc
Q 048430 829 LLDGVDPVTQTMTLATIGYMAPEYGS-------EGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPG 901 (973)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~y~aPE~~~-------~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 901 (973)
.............+||+.|+|||.+. ...++.++|||||||++|||++|+.||...... .........
T Consensus 211 ~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~-----~~~~~i~~~ 285 (412)
T 2vd5_A 211 KLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTA-----ETYGKIVHY 285 (412)
T ss_dssp ECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHH-----HHHHHHHTH
T ss_pred eccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHH-----HHHHHHHhc
Confidence 76543333334567999999999876 456899999999999999999999999653211 111110000
Q ss_pred chhhhcccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCC---CCHHHHHHH
Q 048430 902 AVTEVVDANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEER---INVKDALAD 957 (973)
Q Consensus 902 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~R---pt~~evl~~ 957 (973)
. ..+.. . .....++.++.+++.+||+ +|++| |+++|+++|
T Consensus 286 ~------~~~~~-p--------~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~H 328 (412)
T 2vd5_A 286 K------EHLSL-P--------LVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTH 328 (412)
T ss_dssp H------HHCCC-C------------CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTS
T ss_pred c------cCcCC-C--------ccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcC
Confidence 0 00000 0 0012346678999999999 99998 589999876
No 114
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=3.8e-39 Score=350.10 Aligned_cols=262 Identities=23% Similarity=0.383 Sum_probs=217.7
Q ss_pred HHhcCCCCCccccccCceEEEEEEeC-CCeEEEEEEEeccchhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEEE
Q 048430 677 QATNGFGESNLLGSGSFDNVYKATLA-NGVSVAVKVFNLQEDRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALIM 755 (973)
Q Consensus 677 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 755 (973)
...++|...+.||+|+||.||+|... +++.||+|++.... ...+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 10 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 88 (288)
T 3kfa_A 10 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 88 (288)
T ss_dssp CCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEE
T ss_pred ccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEE
Confidence 34567888899999999999999965 58899999987543 34578999999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCCC
Q 048430 756 QYMPQGSLEKWLYSHN-YSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGVD 834 (973)
Q Consensus 756 e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 834 (973)
||+++++|.+++.... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||.+.......
T Consensus 89 e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 165 (288)
T 3kfa_A 89 EFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 165 (288)
T ss_dssp ECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHH---HHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSS
T ss_pred EcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHH---HCCccCCCCCcceEEEcCCCCEEEccCccceeccCCc
Confidence 9999999999998743 46999999999999999999999 7899999999999999999999999999998776544
Q ss_pred CcccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCccccCcccHHHHHHhhCCcchhhhcccccCC
Q 048430 835 PVTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFT-RRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLLS 913 (973)
Q Consensus 835 ~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 913 (973)
........+++.|+|||......++.++||||||+++|||++ |..||...... .....+.... ..
T Consensus 166 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~--~~~~~~~~~~------------~~ 231 (288)
T 3kfa_A 166 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QVYELLEKDY------------RM 231 (288)
T ss_dssp SEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--GHHHHHHTTC------------CC
T ss_pred cccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHhccC------------CC
Confidence 444445567889999999888889999999999999999999 99998653221 1222111110 00
Q ss_pred CCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHHHHH
Q 048430 914 REDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIKKILT 966 (973)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~~~~~ 966 (973)
..+..+++.+.+++.+|++.||++||+++|+++.|+.+.+...
T Consensus 232 ----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~~~ 274 (288)
T 3kfa_A 232 ----------ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESS 274 (288)
T ss_dssp ----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred ----------CCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHhcc
Confidence 0112345678999999999999999999999999999887643
No 115
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=3e-38 Score=354.05 Aligned_cols=249 Identities=25% Similarity=0.321 Sum_probs=203.4
Q ss_pred cCCCCCccccccCceEEEEEEeC-CCeEEEEEEEeccc---hhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEEE
Q 048430 680 NGFGESNLLGSGSFDNVYKATLA-NGVSVAVKVFNLQE---DRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALIM 755 (973)
Q Consensus 680 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 755 (973)
++|...+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~ 94 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV 94 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 56888899999999999999854 68899999987542 234567889999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCCCC
Q 048430 756 QYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGVDP 835 (973)
Q Consensus 756 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 835 (973)
||+.+|+|.+++.... .+++..+..++.||+.||.||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 95 e~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~-- 168 (384)
T 4fr4_A 95 DLLLGGDLRYHLQQNV-HFKEETVKLFICELVMALDYLQ---NQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE-- 168 (384)
T ss_dssp CCCTTEEHHHHHHTTC-CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTT--
T ss_pred ecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceeccCcHHHeEECCCCCEEEeccceeeeccCC--
Confidence 9999999999998764 7999999999999999999999 799999999999999999999999999999876432
Q ss_pred cccccccccccccCccCCCC---CCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhcccccC
Q 048430 836 VTQTMTLATIGYMAPEYGSE---GIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLL 912 (973)
Q Consensus 836 ~~~~~~~~~~~y~aPE~~~~---~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 912 (973)
.......||+.|+|||.+.. ..++.++|||||||++|||++|+.||...... .....+.... ....
T Consensus 169 ~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~--~~~~~~~~~~---------~~~~ 237 (384)
T 4fr4_A 169 TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSST--SSKEIVHTFE---------TTVV 237 (384)
T ss_dssp CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTS--CHHHHHHHHH---------HCCC
T ss_pred CceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCc--cHHHHHHHHh---------hccc
Confidence 23345679999999998764 45899999999999999999999999653222 1122111100 0000
Q ss_pred CCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCC-HHHHHH
Q 048430 913 SREDEEDADDFATKKTCISYIMSLALKCSAEIPEERIN-VKDALA 956 (973)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt-~~evl~ 956 (973)
..+..++.++.+++.+||+.||++||+ ++++.+
T Consensus 238 -----------~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 238 -----------TYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp -----------CCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred -----------CCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 011124567899999999999999998 666665
No 116
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=2.2e-39 Score=374.09 Aligned_cols=257 Identities=27% Similarity=0.441 Sum_probs=204.7
Q ss_pred HhcCCCCCccccccCceEEEEEEeCCCeEEEEEEEeccchhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEEEEe
Q 048430 678 ATNGFGESNLLGSGSFDNVYKATLANGVSVAVKVFNLQEDRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALIMQY 757 (973)
Q Consensus 678 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 757 (973)
..++|...+.||+|+||.||+|....+..||||+++... ...+.|.+|++++++++||||+++++++.+ +..++||||
T Consensus 182 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~ 259 (452)
T 1fmk_A 182 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEY 259 (452)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECC
T ss_pred ChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehh
Confidence 345677889999999999999999888899999987543 234689999999999999999999999976 678999999
Q ss_pred cCCCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCCCCc
Q 048430 758 MPQGSLEKWLYSHN-YSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGVDPV 836 (973)
Q Consensus 758 ~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 836 (973)
+++|+|.+++.... ..+++.++..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++........
T Consensus 260 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 336 (452)
T 1fmk_A 260 MSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT 336 (452)
T ss_dssp CTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCCTTC--------
T ss_pred hcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChhhEEECCCCCEEECCCccceecCCCcee
Confidence 99999999997532 46899999999999999999999 799999999999999999999999999999876533322
Q ss_pred ccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCccccCcccHHHHHHhhCCcchhhhcccccCCCC
Q 048430 837 TQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFT-RRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLLSRE 915 (973)
Q Consensus 837 ~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 915 (973)
......++..|+|||.+....++.++|||||||++|||++ |+.||......+ ....+.. + .
T Consensus 337 ~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~--~~~~i~~---~---------~---- 398 (452)
T 1fmk_A 337 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE--VLDQVER---G---------Y---- 398 (452)
T ss_dssp ------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH--HHHHHHT---T---------C----
T ss_pred cccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHc---C---------C----
Confidence 3334457889999999888899999999999999999999 999986532211 1111110 0 0
Q ss_pred chhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHH
Q 048430 916 DEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIKK 963 (973)
Q Consensus 916 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~~ 963 (973)
+...+..+++.+.+++.+||+.||++|||++++++.|+.+..
T Consensus 399 ------~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~ 440 (452)
T 1fmk_A 399 ------RMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT 440 (452)
T ss_dssp ------CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTS
T ss_pred ------CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhc
Confidence 001122456779999999999999999999999999987653
No 117
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=1.1e-38 Score=355.47 Aligned_cols=252 Identities=23% Similarity=0.302 Sum_probs=190.6
Q ss_pred HhcCCCCCccccccCceEEEEEEeC-CCeEEEEEEEeccchhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEEEE
Q 048430 678 ATNGFGESNLLGSGSFDNVYKATLA-NGVSVAVKVFNLQEDRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALIMQ 756 (973)
Q Consensus 678 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 756 (973)
..++|...+.||+|+||.||+|+.. +++.||||+++... ..+.+.+|+.++++++||||+++++++.+++..++|||
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 128 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLE 128 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEE
Confidence 4567888999999999999999965 58899999987543 33678899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCC---CCcEEEeecccccccCCC
Q 048430 757 YMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDD---DMVAHLGDFGIAKLLDGV 833 (973)
Q Consensus 757 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~---~~~~kl~Dfgla~~~~~~ 833 (973)
|+++|+|.+++.... .+++.++..++.|++.||.||| +.+|+||||||+||+++. ++.+||+|||+++.....
T Consensus 129 ~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 204 (349)
T 2w4o_A 129 LVTGGELFDRIVEKG-YYSERDAADAVKQILEAVAYLH---ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQ 204 (349)
T ss_dssp CCCSCBHHHHHTTCS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEESSSSTTCCEEECCCC--------
T ss_pred eCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCcccEEEecCCCCCCEEEccCccccccCcc
Confidence 999999999998764 6899999999999999999999 789999999999999975 889999999999865432
Q ss_pred CCcccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhcccccCC
Q 048430 834 DPVTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLLS 913 (973)
Q Consensus 834 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 913 (973)
.......||+.|+|||.+.+..++.++|||||||++|||++|+.||.............. ... ...
T Consensus 205 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~----~~~--------~~~ 270 (349)
T 2w4o_A 205 --VLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRIL----NCE--------YYF 270 (349)
T ss_dssp ----------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHH----TTC--------CCC
T ss_pred --cccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHH----hCC--------Ccc
Confidence 222345689999999999988999999999999999999999999865322211111111 000 000
Q ss_pred CCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 914 REDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
.. .....++.++.+++.+||+.||++||++.|+++|
T Consensus 271 ~~--------~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 306 (349)
T 2w4o_A 271 IS--------PWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQH 306 (349)
T ss_dssp CT--------TTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred CC--------chhhhCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00 0011245668899999999999999999999975
No 118
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=1.7e-39 Score=367.57 Aligned_cols=259 Identities=19% Similarity=0.249 Sum_probs=208.3
Q ss_pred HHHHHHhcCCCCCccccccCceEEEEEEeC-CCeEEEEEEEeccc---hhhHHHHHHHHHHHHhccCCceeEEEeeeecC
Q 048430 673 HELQQATNGFGESNLLGSGSFDNVYKATLA-NGVSVAVKVFNLQE---DRALKSFDTECEVMRRIRHRNLIKIVSSCSNP 748 (973)
Q Consensus 673 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 748 (973)
.++....++|...++||+|+||.||+|+.. +++.||+|+++... ....+.+.+|+.+++.++||||+++++++.+.
T Consensus 62 ~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~ 141 (410)
T 3v8s_A 62 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD 141 (410)
T ss_dssp HHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred HhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEEC
Confidence 344455678999999999999999999965 68999999987532 12234588999999999999999999999999
Q ss_pred CeeEEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeeccccc
Q 048430 749 GFKALIMQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAK 828 (973)
Q Consensus 749 ~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~ 828 (973)
+..++||||+++|+|.+++... .+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++
T Consensus 142 ~~~~lV~E~~~gg~L~~~l~~~--~~~e~~~~~~~~qi~~aL~~LH---~~givHrDLKp~NILl~~~g~ikL~DFG~a~ 216 (410)
T 3v8s_A 142 RYLYMVMEYMPGGDLVNLMSNY--DVPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCM 216 (410)
T ss_dssp SEEEEEECCCTTEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred CEEEEEEeCCCCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeeECCCCCEEEeccceeE
Confidence 9999999999999999999875 5899999999999999999999 7999999999999999999999999999998
Q ss_pred ccCCCCCcccccccccccccCccCCCCCC----CCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchh
Q 048430 829 LLDGVDPVTQTMTLATIGYMAPEYGSEGI----VSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVT 904 (973)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~----~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 904 (973)
.............+||+.|+|||.+.... ++.++|||||||++|||++|+.||..... ............
T Consensus 217 ~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~-----~~~~~~i~~~~~- 290 (410)
T 3v8s_A 217 KMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL-----VGTYSKIMNHKN- 290 (410)
T ss_dssp ECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSH-----HHHHHHHHTHHH-
T ss_pred eeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCCh-----hhHHHHHHhccc-
Confidence 76543333344568999999999876554 78999999999999999999999965221 111111100000
Q ss_pred hhcccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCC--CCCHHHHHHH
Q 048430 905 EVVDANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEE--RINVKDALAD 957 (973)
Q Consensus 905 ~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~--Rpt~~evl~~ 957 (973)
. +. ++....++.++.+++.+|++.+|++ ||+++|+++|
T Consensus 291 ~-----~~----------~p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 291 S-----LT----------FPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp H-----CC----------CCTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred c-----cc----------CCCcccccHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence 0 00 0000123566889999999999998 9999999987
No 119
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=5.5e-39 Score=345.50 Aligned_cols=250 Identities=26% Similarity=0.424 Sum_probs=193.8
Q ss_pred cCCCCCccccccCceEEEEEEeCCCeEEEEEEEeccch----hhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEEE
Q 048430 680 NGFGESNLLGSGSFDNVYKATLANGVSVAVKVFNLQED----RALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALIM 755 (973)
Q Consensus 680 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 755 (973)
++|...+.||+|+||.||+|... ++.||||+++.... ...+.+.+|+++++.++||||+++++++.+.+..++||
T Consensus 7 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 85 (271)
T 3dtc_A 7 AELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVM 85 (271)
T ss_dssp TSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEE
T ss_pred hheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEE
Confidence 57888899999999999999976 89999999865432 23567899999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCC---eEEccCCCCcEEeCC--------CCcEEEeec
Q 048430 756 QYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTP---IIHCDLKPNNVLLDD--------DMVAHLGDF 824 (973)
Q Consensus 756 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~---ivH~dlk~~Nill~~--------~~~~kl~Df 824 (973)
||+++++|.+++... .+++..+..++.|++.||+||| +.+ |+||||||+||+++. ++.+||+||
T Consensus 86 e~~~~~~L~~~~~~~--~~~~~~~~~i~~~l~~~l~~lH---~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Df 160 (271)
T 3dtc_A 86 EFARGGPLNRVLSGK--RIPPDILVNWAVQIARGMNYLH---DEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDF 160 (271)
T ss_dssp ECCTTEEHHHHHTSS--CCCHHHHHHHHHHHHHHHHHHH---HSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCC
T ss_pred EcCCCCCHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHH---hCCCCceeecCCchHHEEEecccccccccCcceEEccC
Confidence 999999999999654 6999999999999999999999 566 999999999999986 778999999
Q ss_pred ccccccCCCCCcccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchh
Q 048430 825 GIAKLLDGVDPVTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVT 904 (973)
Q Consensus 825 gla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 904 (973)
|.+...... ......|++.|+|||...+..++.++||||||+++|||++|+.||....... ....+. .
T Consensus 161 g~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~--~~~~~~--~----- 228 (271)
T 3dtc_A 161 GLAREWHRT---TKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLA--VAYGVA--M----- 228 (271)
T ss_dssp CC----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHH--HHHHHH--T-----
T ss_pred Ccccccccc---cccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHhhh--c-----
Confidence 999865432 2224568999999999888889999999999999999999999986532111 000000 0
Q ss_pred hhcccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHH
Q 048430 905 EVVDANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKI 961 (973)
Q Consensus 905 ~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~ 961 (973)
..... ..+..+++.+.+++.+||+.||++||++.|++++|+++
T Consensus 229 ----~~~~~----------~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 229 ----NKLAL----------PIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp ----SCCCC----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred ----CCCCC----------CCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 00000 01123456789999999999999999999999999864
No 120
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=7.1e-39 Score=350.55 Aligned_cols=267 Identities=24% Similarity=0.420 Sum_probs=208.3
Q ss_pred cCCCCCccccccCceEEEEEEe-----CCCeEEEEEEEeccc-hhhHHHHHHHHHHHHhccCCceeEEEeeeecC--Cee
Q 048430 680 NGFGESNLLGSGSFDNVYKATL-----ANGVSVAVKVFNLQE-DRALKSFDTECEVMRRIRHRNLIKIVSSCSNP--GFK 751 (973)
Q Consensus 680 ~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~ 751 (973)
+.|...+.||+|+||.||+|++ .+++.||||+++... ....+.+.+|+.++++++||||+++++++... ...
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 100 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 100 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence 3477789999999999999983 468999999987543 23457889999999999999999999999776 678
Q ss_pred EEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccC
Q 048430 752 ALIMQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLD 831 (973)
Q Consensus 752 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~ 831 (973)
++||||+++|+|.+++......+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++....
T Consensus 101 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 177 (302)
T 4e5w_A 101 KLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIE 177 (302)
T ss_dssp EEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTCEECC
T ss_pred EEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhh---cCCcccCCCchheEEEcCCCCEEECccccccccc
Confidence 9999999999999999776667999999999999999999999 7999999999999999999999999999998765
Q ss_pred CCCCc--ccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhC--Ccc--hhh
Q 048430 832 GVDPV--TQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESL--PGA--VTE 905 (973)
Q Consensus 832 ~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~--~~~--~~~ 905 (973)
..... ......+|..|+|||.+.+..++.++||||+||++|||++|+.|+.... ..+..... .+. ...
T Consensus 178 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~------~~~~~~~~~~~~~~~~~~ 251 (302)
T 4e5w_A 178 TDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPM------ALFLKMIGPTHGQMTVTR 251 (302)
T ss_dssp TTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHH------HHHHHHHCSCCGGGHHHH
T ss_pred CCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchh------hHHhhccCCcccccCHHH
Confidence 43321 2234568888999999888889999999999999999999999854321 11111100 000 000
Q ss_pred hcccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHH
Q 048430 906 VVDANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIK 962 (973)
Q Consensus 906 ~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~ 962 (973)
... .+... .....+..+++++.+++.+||+.||++|||++|+++.|+++.
T Consensus 252 ~~~-~~~~~------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 252 LVN-TLKEG------KRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp HHH-HHHTT------CCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHH-HHhcc------CCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 000 00000 001112245677999999999999999999999999999875
No 121
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=1e-38 Score=350.24 Aligned_cols=246 Identities=26% Similarity=0.309 Sum_probs=205.3
Q ss_pred hcCCCCCccccccCceEEEEEEeC-CCeEEEEEEEeccc---hhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEE
Q 048430 679 TNGFGESNLLGSGSFDNVYKATLA-NGVSVAVKVFNLQE---DRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALI 754 (973)
Q Consensus 679 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 754 (973)
.++|...+.||+|+||.||+|+.. +|+.||+|+++... ....+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 84 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI 84 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence 356888999999999999999964 79999999997542 23356788999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCCC
Q 048430 755 MQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGVD 834 (973)
Q Consensus 755 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 834 (973)
|||+++|+|.+++.... .+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 85 ~e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~-- 158 (318)
T 1fot_A 85 MDYIEGGELFSLLRKSQ-RFPNPVAKFYAAEVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD-- 158 (318)
T ss_dssp ECCCCSCBHHHHHHHTS-SCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECTTSCEEECCCSSCEECSS--
T ss_pred EeCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChheEEEcCCCCEEEeecCcceecCC--
Confidence 99999999999998765 6999999999999999999999 89999999999999999999999999999987542
Q ss_pred CcccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhcccccCCC
Q 048430 835 PVTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLLSR 914 (973)
Q Consensus 835 ~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 914 (973)
......||+.|+|||.+.+..++.++||||+||++|||++|+.||..... ...... +......
T Consensus 159 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-----~~~~~~--------i~~~~~~-- 221 (318)
T 1fot_A 159 --VTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNT-----MKTYEK--------ILNAELR-- 221 (318)
T ss_dssp --CBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH-----HHHHHH--------HHHCCCC--
T ss_pred --ccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH-----HHHHHH--------HHhCCCC--
Confidence 12345799999999999988999999999999999999999999965221 111111 1111100
Q ss_pred CchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCC-----CHHHHHHH
Q 048430 915 EDEEDADDFATKKTCISYIMSLALKCSAEIPEERI-----NVKDALAD 957 (973)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rp-----t~~evl~~ 957 (973)
.+..++.++.+++.+|++.||++|| +++|+++|
T Consensus 222 ----------~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~h 259 (318)
T 1fot_A 222 ----------FPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH 259 (318)
T ss_dssp ----------CCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred ----------CCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcC
Confidence 0112356688999999999999999 88999876
No 122
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2e-38 Score=344.16 Aligned_cols=260 Identities=21% Similarity=0.357 Sum_probs=212.0
Q ss_pred CCCCCc-cccccCceEEEEEEeC---CCeEEEEEEEeccc-hhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEEE
Q 048430 681 GFGESN-LLGSGSFDNVYKATLA---NGVSVAVKVFNLQE-DRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALIM 755 (973)
Q Consensus 681 ~~~~~~-~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 755 (973)
+|...+ .||+|+||.||+|... +++.||||+++... ....+.+.+|++++++++||||+++++++ ..+..++||
T Consensus 10 ~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv~ 88 (287)
T 1u59_A 10 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVM 88 (287)
T ss_dssp GEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEEE
T ss_pred HhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEEE
Confidence 444555 8999999999999853 68899999997653 34567899999999999999999999999 456689999
Q ss_pred EecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCCCC
Q 048430 756 QYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGVDP 835 (973)
Q Consensus 756 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 835 (973)
||+++++|.+++......+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++........
T Consensus 89 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~ 165 (287)
T 1u59_A 89 EMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDS 165 (287)
T ss_dssp ECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSC
T ss_pred EeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHH---HCCEeeCCCchheEEEcCCCCEEECcccceeeeccCcc
Confidence 999999999999876667999999999999999999999 78999999999999999999999999999987653332
Q ss_pred cc--cccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCccccCcccHHHHHHhhCCcchhhhcccccC
Q 048430 836 VT--QTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFT-RRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLL 912 (973)
Q Consensus 836 ~~--~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 912 (973)
.. .....+|+.|+|||......++.++|||||||++|||++ |+.||...... .....+.....
T Consensus 166 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~~~~~i~~~~~------------ 231 (287)
T 1u59_A 166 YYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP--EVMAFIEQGKR------------ 231 (287)
T ss_dssp EECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH--HHHHHHHTTCC------------
T ss_pred eeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH--HHHHHHhcCCc------------
Confidence 21 223356889999999888889999999999999999998 99998653221 11121111000
Q ss_pred CCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHHHHHhh
Q 048430 913 SREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIKKILTQA 968 (973)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~~~~~~~ 968 (973)
...+..+++++.+++.+||+.+|++||++.|++++|+++.......
T Consensus 232 ----------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~~ 277 (287)
T 1u59_A 232 ----------MECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASK 277 (287)
T ss_dssp ----------CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHTT
T ss_pred ----------CCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCCc
Confidence 0011234667999999999999999999999999999998876654
No 123
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=4.9e-38 Score=356.67 Aligned_cols=275 Identities=18% Similarity=0.247 Sum_probs=205.8
Q ss_pred hcCCCCCcccccc--CceEEEEEEeC-CCeEEEEEEEeccc--hhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEE
Q 048430 679 TNGFGESNLLGSG--SFDNVYKATLA-NGVSVAVKVFNLQE--DRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKAL 753 (973)
Q Consensus 679 ~~~~~~~~~lg~G--~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 753 (973)
.++|...++||+| +||.||+|+.. +++.||||+++... ....+.+.+|+.++++++||||+++++++.+.+..++
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 103 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV 103 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence 4568889999999 99999999965 79999999997653 3445778899999999999999999999999999999
Q ss_pred EEEecCCCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCC
Q 048430 754 IMQYMPQGSLEKWLYSHN-YSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDG 832 (973)
Q Consensus 754 v~e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~ 832 (973)
||||+++|+|.+++.... ..+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||.+.....
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~ 180 (389)
T 3gni_B 104 VTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIH---HMGYVHRSVKASHILISVDGKVYLSGLRSNLSMIS 180 (389)
T ss_dssp EEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCGGGCEECEE
T ss_pred EEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEcccccceeecc
Confidence 999999999999998752 46999999999999999999999 79999999999999999999999999998865421
Q ss_pred CC------CcccccccccccccCccCCCC--CCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcc--
Q 048430 833 VD------PVTQTMTLATIGYMAPEYGSE--GIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGA-- 902 (973)
Q Consensus 833 ~~------~~~~~~~~~~~~y~aPE~~~~--~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~-- 902 (973)
.. ........||+.|+|||.+.. ..++.++|||||||++|||++|+.||......... ........+..
T Consensus 181 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~-~~~~~~~~~~~~~ 259 (389)
T 3gni_B 181 HGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQML-LEKLNGTVPCLLD 259 (389)
T ss_dssp TTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHH-HHC----------
T ss_pred ccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHH-HHHhcCCCCcccc
Confidence 11 111223468999999998877 57899999999999999999999999764332211 11111000000
Q ss_pred --------hhh-----h----cccccCCCC---chhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 903 --------VTE-----V----VDANLLSRE---DEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 903 --------~~~-----~----~d~~l~~~~---~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
... . ......... ..........+..+++++.+++.+||+.||++|||++|+++|
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~h 334 (389)
T 3gni_B 260 TSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 334 (389)
T ss_dssp ----------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred ccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcC
Confidence 000 0 000000000 000001112234467789999999999999999999999987
No 124
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=2.5e-38 Score=348.26 Aligned_cols=273 Identities=23% Similarity=0.315 Sum_probs=193.4
Q ss_pred hcCCCCCccccccCceEEEEEEe-CCCeEEEEEEEeccch-hhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEEEE
Q 048430 679 TNGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQED-RALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALIMQ 756 (973)
Q Consensus 679 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 756 (973)
.++|...+.||+|+||.||+|.. .+++.||||+++.... ...+.+.+|+.++++++||||+++++++..++..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 83 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE 83 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence 46788899999999999999985 4689999999875532 334678899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhCC-----CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccC
Q 048430 757 YMPQGSLEKWLYSHN-----YSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLD 831 (973)
Q Consensus 757 ~~~~gsL~~~l~~~~-----~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~ 831 (973)
|++ |+|.+++.... ..+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++...
T Consensus 84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 159 (317)
T 2pmi_A 84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCH---ENKILHRDLKPQNLLINKRGQLKLGDFGLARAFG 159 (317)
T ss_dssp CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence 998 59999987532 35899999999999999999999 7899999999999999999999999999998764
Q ss_pred CCCCcccccccccccccCccCCCC-CCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhC--Ccchhhhcc
Q 048430 832 GVDPVTQTMTLATIGYMAPEYGSE-GIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESL--PGAVTEVVD 908 (973)
Q Consensus 832 ~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~d 908 (973)
... .......+|+.|+|||.+.+ ..++.++|||||||++|||++|+.||...... ..+........ .......+.
T Consensus 160 ~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~ 237 (317)
T 2pmi_A 160 IPV-NTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDE-EQLKLIFDIMGTPNESLWPSVT 237 (317)
T ss_dssp SCC-CCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCSCCTTTCGGGG
T ss_pred CCc-ccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCCCChhHhhhhh
Confidence 322 22334568999999998765 46899999999999999999999999753221 11222222111 111110000
Q ss_pred ------cccCCCCch--hhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 909 ------ANLLSREDE--EDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 909 ------~~l~~~~~~--~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
+........ ...........++.++.+++.+||+.||++|||++|+++|
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h 294 (317)
T 2pmi_A 238 KLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHH 294 (317)
T ss_dssp GCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred hhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCC
Confidence 000000000 0000001112345679999999999999999999999876
No 125
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=2.3e-38 Score=345.63 Aligned_cols=250 Identities=22% Similarity=0.303 Sum_probs=197.1
Q ss_pred hcCCCCCccccccCceEEEEEEe-CCCeEEEEEEEeccch--------------------------hhHHHHHHHHHHHH
Q 048430 679 TNGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQED--------------------------RALKSFDTECEVMR 731 (973)
Q Consensus 679 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--------------------------~~~~~~~~e~~~l~ 731 (973)
.++|...+.||+|+||.||+|+. .+++.||||++..... ...+.+.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 46788899999999999999985 5789999999865421 12356889999999
Q ss_pred hccCCceeEEEeeeec--CCeeEEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCC
Q 048430 732 RIRHRNLIKIVSSCSN--PGFKALIMQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPN 809 (973)
Q Consensus 732 ~l~h~niv~l~~~~~~--~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~ 809 (973)
+++||||+++++++.+ .+..++||||+++++|.+++... .+++.++..++.|++.||+||| +.+|+||||||+
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~ 166 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLK--PLSEDQARFYFQDLIKGIEYLH---YQKIIHRDIKPS 166 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCSS--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGG
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHH
Confidence 9999999999999976 56889999999999998866543 6999999999999999999999 789999999999
Q ss_pred cEEeCCCCcEEEeecccccccCCCCCcccccccccccccCccCCCCCC---CCcchhHHHHHHHHHHHHhCCCCCCcccc
Q 048430 810 NVLLDDDMVAHLGDFGIAKLLDGVDPVTQTMTLATIGYMAPEYGSEGI---VSISGDVYSFGILMMETFTRRKPTNEMFT 886 (973)
Q Consensus 810 Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~---~~~~sDvws~Gvvl~elltg~~p~~~~~~ 886 (973)
||+++.++.+||+|||+++...... .......||+.|+|||.+.... ++.++|||||||++|||++|+.||....
T Consensus 167 Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~- 244 (298)
T 2zv2_A 167 NLLVGEDGHIKIADFGVSNEFKGSD-ALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDER- 244 (298)
T ss_dssp GEEECTTSCEEECCCTTCEECSSSS-CEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSS-
T ss_pred HEEECCCCCEEEecCCCcccccccc-ccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCcc-
Confidence 9999999999999999998765332 2233457999999999887654 4789999999999999999999986421
Q ss_pred CcccHHHHHHhhCCcchhhhcccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 887 GEMSLKQWVAESLPGAVTEVVDANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 887 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
...+...... ..... . ....+++++.+++.+||+.||++||+++|+++|
T Consensus 245 ----~~~~~~~~~~--------~~~~~-~---------~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~h 293 (298)
T 2zv2_A 245 ----IMCLHSKIKS--------QALEF-P---------DQPDIAEDLKDLITRMLDKNPESRIVVPEIKLH 293 (298)
T ss_dssp ----HHHHHHHHHH--------CCCCC-C---------SSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTC
T ss_pred ----HHHHHHHHhc--------ccCCC-C---------CccccCHHHHHHHHHHhhcChhhCCCHHHHhcC
Confidence 1111111000 00000 0 001235668899999999999999999999876
No 126
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=1.3e-38 Score=353.52 Aligned_cols=265 Identities=27% Similarity=0.470 Sum_probs=212.8
Q ss_pred HhcCCCCCccccccCceEEEEEEe--------CCCeEEEEEEEeccc-hhhHHHHHHHHHHHHhc-cCCceeEEEeeeec
Q 048430 678 ATNGFGESNLLGSGSFDNVYKATL--------ANGVSVAVKVFNLQE-DRALKSFDTECEVMRRI-RHRNLIKIVSSCSN 747 (973)
Q Consensus 678 ~~~~~~~~~~lg~G~~g~Vy~~~~--------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~ 747 (973)
..++|...+.||+|+||.||+|+. .+++.||||+++... ....+.+.+|+.+++++ +||||+++++++.+
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 112 (334)
T 2pvf_A 33 PRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 112 (334)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred CHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEcc
Confidence 346788899999999999999985 357789999987553 34467899999999999 89999999999999
Q ss_pred CCeeEEEEEecCCCCHHHHhhhCC---------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEE
Q 048430 748 PGFKALIMQYMPQGSLEKWLYSHN---------------YSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVL 812 (973)
Q Consensus 748 ~~~~~lv~e~~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nil 812 (973)
.+..++||||+++|+|.+++.... ..+++.++..++.|++.||+||| +.+|+||||||+||+
T Consensus 113 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIl 189 (334)
T 2pvf_A 113 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVL 189 (334)
T ss_dssp SSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEE
T ss_pred CCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCccceEE
Confidence 999999999999999999998654 24899999999999999999999 789999999999999
Q ss_pred eCCCCcEEEeecccccccCCCCCc-ccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCccccCccc
Q 048430 813 LDDDMVAHLGDFGIAKLLDGVDPV-TQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFT-RRKPTNEMFTGEMS 890 (973)
Q Consensus 813 l~~~~~~kl~Dfgla~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~ellt-g~~p~~~~~~~~~~ 890 (973)
++.++.+||+|||+++........ ......+++.|+|||.+.+..++.++|||||||++|||++ |+.||...... .
T Consensus 190 l~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~ 267 (334)
T 2pvf_A 190 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE--E 267 (334)
T ss_dssp ECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--H
T ss_pred EcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHH--H
Confidence 999999999999999876543322 2233457889999999888889999999999999999999 99998653211 1
Q ss_pred HHHHHHhhCCcchhhhcccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHHHHHhhc
Q 048430 891 LKQWVAESLPGAVTEVVDANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIKKILTQAL 969 (973)
Q Consensus 891 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~~~~~~~~ 969 (973)
+...+..... . ..+..++.++.+++.+||+.+|++||++.|++++|+++.+....+.
T Consensus 268 ~~~~~~~~~~------------~----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~~~~~ 324 (334)
T 2pvf_A 268 LFKLLKEGHR------------M----------DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTNEE 324 (334)
T ss_dssp HHHHHHHTCC------------C----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC---
T ss_pred HHHHHhcCCC------------C----------CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccccCc
Confidence 1111111000 0 0011345678999999999999999999999999999988765443
No 127
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=1.4e-38 Score=352.70 Aligned_cols=252 Identities=23% Similarity=0.277 Sum_probs=205.1
Q ss_pred HHHhcCCCCCccccccCceEEEEEEeC-CCeEEEEEEEeccc---hhhHHHHHHHHHHHHhc-cCCceeEEEeeeecCCe
Q 048430 676 QQATNGFGESNLLGSGSFDNVYKATLA-NGVSVAVKVFNLQE---DRALKSFDTECEVMRRI-RHRNLIKIVSSCSNPGF 750 (973)
Q Consensus 676 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~ 750 (973)
....++|...+.||+|+||.||+|+.. +++.||||+++... ....+.+..|..++..+ +||||+++++++.+.+.
T Consensus 13 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~ 92 (345)
T 1xjd_A 13 KLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKEN 92 (345)
T ss_dssp ---CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred CCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCE
Confidence 345678999999999999999999964 68999999997542 23456788899999887 89999999999999999
Q ss_pred eEEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeeccccccc
Q 048430 751 KALIMQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLL 830 (973)
Q Consensus 751 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~ 830 (973)
.++||||+++|+|.+++.... .+++.++..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 93 ~~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~ 168 (345)
T 1xjd_A 93 LFFVMEYLNGGDLMYHIQSCH-KFDLSRATFYAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKEN 168 (345)
T ss_dssp EEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred EEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCChhhEEECCCCCEEEeEChhhhhc
Confidence 999999999999999998754 6999999999999999999999 789999999999999999999999999999864
Q ss_pred CCCCCcccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhcccc
Q 048430 831 DGVDPVTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDAN 910 (973)
Q Consensus 831 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 910 (973)
.... ......+||+.|+|||.+.+..++.++||||+||++|||++|+.||..... ..+...+.... ..
T Consensus 169 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--~~~~~~i~~~~---------~~ 236 (345)
T 1xjd_A 169 MLGD-AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDE--EELFHSIRMDN---------PF 236 (345)
T ss_dssp CCTT-CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHCC---------CC
T ss_pred ccCC-CcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCH--HHHHHHHHhCC---------CC
Confidence 3222 223456799999999999988999999999999999999999999965321 11111111100 00
Q ss_pred cCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHH-HHHHH
Q 048430 911 LLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVK-DALAD 957 (973)
Q Consensus 911 l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~-evl~~ 957 (973)
.+..++.++.+++.+||+.||++||++. |+++|
T Consensus 237 --------------~p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~~h 270 (345)
T 1xjd_A 237 --------------YPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQH 270 (345)
T ss_dssp --------------CCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGGS
T ss_pred --------------CCcccCHHHHHHHHHHhcCCHhHcCCChHHHHcC
Confidence 0112356688999999999999999997 77654
No 128
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=2.2e-38 Score=349.14 Aligned_cols=271 Identities=24% Similarity=0.376 Sum_probs=217.6
Q ss_pred CCHHHHHHHhcCCCCCccccccCceEEEEEEe------CCCeEEEEEEEeccch-hhHHHHHHHHHHHHhc-cCCceeEE
Q 048430 670 ISYHELQQATNGFGESNLLGSGSFDNVYKATL------ANGVSVAVKVFNLQED-RALKSFDTECEVMRRI-RHRNLIKI 741 (973)
Q Consensus 670 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~l 741 (973)
....++....++|...+.||+|+||.||+|+. .+++.||||+++.... ...+.+.+|+.+++++ +||||+++
T Consensus 17 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~ 96 (316)
T 2xir_A 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 96 (316)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred ccccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeE
Confidence 34455556678899999999999999999974 3578999999976533 3456789999999999 79999999
Q ss_pred EeeeecCC-eeEEEEEecCCCCHHHHhhhCCCC---------------CCHHHHHHHHHHHHHHHHHhhhcCCCCeEEcc
Q 048430 742 VSSCSNPG-FKALIMQYMPQGSLEKWLYSHNYS---------------LTIRQRLDIMIDVASALEYLHHGYSTPIIHCD 805 (973)
Q Consensus 742 ~~~~~~~~-~~~lv~e~~~~gsL~~~l~~~~~~---------------l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~d 805 (973)
++++...+ ..++||||+++|+|.+++...... +++..+..++.|++.||.||| +.+|+|||
T Consensus 97 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~d 173 (316)
T 2xir_A 97 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRD 173 (316)
T ss_dssp EEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHH---HTTCCCSC
T ss_pred EEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHH---hCCccccc
Confidence 99987654 589999999999999999876422 889999999999999999999 78999999
Q ss_pred CCCCcEEeCCCCcEEEeecccccccCCCCC-cccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCc
Q 048430 806 LKPNNVLLDDDMVAHLGDFGIAKLLDGVDP-VTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFT-RRKPTNE 883 (973)
Q Consensus 806 lk~~Nill~~~~~~kl~Dfgla~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~ellt-g~~p~~~ 883 (973)
|||+||+++.++.+||+|||+++....... .......+|+.|+|||.+.+..++.++|||||||++|||++ |+.||..
T Consensus 174 ikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~ 253 (316)
T 2xir_A 174 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 253 (316)
T ss_dssp CSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred CccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcc
Confidence 999999999999999999999987643322 22334567899999999888899999999999999999998 9999865
Q ss_pred cccCcccHHHHHHhhCCcchhhhcccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHH
Q 048430 884 MFTGEMSLKQWVAESLPGAVTEVVDANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIKK 963 (973)
Q Consensus 884 ~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~~ 963 (973)
....+ .....+...... ..+..+++++.+++.+||+.||++||++.|++++|+.+.+
T Consensus 254 ~~~~~-~~~~~~~~~~~~----------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 310 (316)
T 2xir_A 254 VKIDE-EFCRRLKEGTRM----------------------RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 310 (316)
T ss_dssp CCCSH-HHHHHHHHTCCC----------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cchhH-HHHHHhccCccC----------------------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 33222 111111111000 0011234568899999999999999999999999999987
Q ss_pred HHH
Q 048430 964 ILT 966 (973)
Q Consensus 964 ~~~ 966 (973)
...
T Consensus 311 ~~~ 313 (316)
T 2xir_A 311 ANA 313 (316)
T ss_dssp HHC
T ss_pred hhc
Confidence 643
No 129
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=1.1e-37 Score=347.60 Aligned_cols=275 Identities=21% Similarity=0.331 Sum_probs=216.0
Q ss_pred CHHHHHHHhcCCCCCccccccCceEEEEEEeCCCeEEEEEEEeccchhhHHHHHHHHHHHHh--ccCCceeEEEeeeecC
Q 048430 671 SYHELQQATNGFGESNLLGSGSFDNVYKATLANGVSVAVKVFNLQEDRALKSFDTECEVMRR--IRHRNLIKIVSSCSNP 748 (973)
Q Consensus 671 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~l~~~~~~~ 748 (973)
+...-....++|...+.||+|+||.||+|+.. ++.||||++.... ...+.+|++++.. ++||||+++++++...
T Consensus 33 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~---~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~ 108 (342)
T 1b6c_B 33 PLLVQRTIARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKD 108 (342)
T ss_dssp CHHHHHHHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEECGGG---HHHHHHHHHHHHHSCCCCTTBCCEEEEEECC
T ss_pred ceeecccccccEEEEeeecCCCCcEEEEEEEc-CccEEEEEeCchh---HHHHHHHHHHHHHhhcCCCcEEEEEeeeccc
Confidence 33344455678999999999999999999984 8999999986432 3567889999888 6899999999999876
Q ss_pred C----eeEEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcC-----CCCeEEccCCCCcEEeCCCCcE
Q 048430 749 G----FKALIMQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGY-----STPIIHCDLKPNNVLLDDDMVA 819 (973)
Q Consensus 749 ~----~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~-----~~~ivH~dlk~~Nill~~~~~~ 819 (973)
. ..++||||+++|+|.+++... .+++.+++.++.|++.||+|||... +.+|+||||||+||+++.++.+
T Consensus 109 ~~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~ 186 (342)
T 1b6c_B 109 NGTWTQLWLVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTC 186 (342)
T ss_dssp CSSCCCEEEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCE
T ss_pred CCccceeEEEEeecCCCcHHHHHhcc--CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCE
Confidence 5 789999999999999999875 5899999999999999999999311 4789999999999999999999
Q ss_pred EEeecccccccCCCCCc---ccccccccccccCccCCCCC------CCCcchhHHHHHHHHHHHHhC----------CCC
Q 048430 820 HLGDFGIAKLLDGVDPV---TQTMTLATIGYMAPEYGSEG------IVSISGDVYSFGILMMETFTR----------RKP 880 (973)
Q Consensus 820 kl~Dfgla~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~------~~~~~sDvws~Gvvl~elltg----------~~p 880 (973)
||+|||++......... ......||+.|+|||.+... .++.++|||||||++|||++| +.|
T Consensus 187 kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p 266 (342)
T 1b6c_B 187 CIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLP 266 (342)
T ss_dssp EECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCT
T ss_pred EEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccC
Confidence 99999999876543322 22345699999999987765 234789999999999999999 678
Q ss_pred CCccccCcccHHHHHHhhCCcchhhhcccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHH
Q 048430 881 TNEMFTGEMSLKQWVAESLPGAVTEVVDANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKK 960 (973)
Q Consensus 881 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~ 960 (973)
|............+.......... +.+ ........++..+.+++.+||+.||++||+++|++++|++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~---------~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~ 333 (342)
T 1b6c_B 267 YYDLVPSDPSVEEMRKVVCEQKLR----PNI---------PNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQ 333 (342)
T ss_dssp TTTTSCSSCCHHHHHHHHTTSCCC----CCC---------CGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHH
T ss_pred ccccCcCcccHHHHHHHHHHHHhC----CCC---------cccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHH
Confidence 766544444444433322111110 000 0011123567789999999999999999999999999999
Q ss_pred HHHH
Q 048430 961 IKKI 964 (973)
Q Consensus 961 ~~~~ 964 (973)
+.++
T Consensus 334 i~~~ 337 (342)
T 1b6c_B 334 LSQQ 337 (342)
T ss_dssp HHHT
T ss_pred HHHH
Confidence 8765
No 130
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.9e-38 Score=345.04 Aligned_cols=256 Identities=27% Similarity=0.369 Sum_probs=200.6
Q ss_pred cCCCCCccccccCceEEEEEEeCCCeEEEEEEEeccchhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEEEEecC
Q 048430 680 NGFGESNLLGSGSFDNVYKATLANGVSVAVKVFNLQEDRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALIMQYMP 759 (973)
Q Consensus 680 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 759 (973)
++|...+.||+|+||.||+|+.. ++.||||++... ...+.+.+|++++++++||||+++++++.+ ..++||||++
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e~~~ 82 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEYAE 82 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEECCT
T ss_pred hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEEcCC
Confidence 46777899999999999999986 789999998643 345789999999999999999999999874 4789999999
Q ss_pred CCCHHHHhhhCC--CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCc-EEEeecccccccCCCCCc
Q 048430 760 QGSLEKWLYSHN--YSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMV-AHLGDFGIAKLLDGVDPV 836 (973)
Q Consensus 760 ~gsL~~~l~~~~--~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~-~kl~Dfgla~~~~~~~~~ 836 (973)
+|+|.+++.... ..+++..+..++.|+++||+|||+...++|+||||||+||+++.++. +||+|||++......
T Consensus 83 ~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~--- 159 (307)
T 2eva_A 83 GGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH--- 159 (307)
T ss_dssp TCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC----------
T ss_pred CCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc---
Confidence 999999998654 24789999999999999999999322289999999999999998886 799999999765321
Q ss_pred ccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhcccccCCCCc
Q 048430 837 TQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLLSRED 916 (973)
Q Consensus 837 ~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 916 (973)
.....||+.|+|||...+..++.++|||||||++|||++|+.||.............+..... +.
T Consensus 160 -~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~--------~~------ 224 (307)
T 2eva_A 160 -MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTR--------PP------ 224 (307)
T ss_dssp ------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTTCC--------CC------
T ss_pred -cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcCCC--------CC------
Confidence 223468999999999988899999999999999999999999997533221111111110000 00
Q ss_pred hhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHHHHH
Q 048430 917 EEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIKKILT 966 (973)
Q Consensus 917 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~~~~~ 966 (973)
.+..++..+.+++.+||+.||++||+++|++++|+.+.+.++
T Consensus 225 --------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 266 (307)
T 2eva_A 225 --------LIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFP 266 (307)
T ss_dssp --------CBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGCC
T ss_pred --------cccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhcc
Confidence 011245668899999999999999999999999999876553
No 131
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=1.5e-38 Score=353.13 Aligned_cols=253 Identities=23% Similarity=0.286 Sum_probs=204.1
Q ss_pred cCCCCCccccccCceEEEEEEeC-CCeEEEEEEEeccc---hhhHHHHHHHHHHHHhc-cCCceeEEEeeeecCCeeEEE
Q 048430 680 NGFGESNLLGSGSFDNVYKATLA-NGVSVAVKVFNLQE---DRALKSFDTECEVMRRI-RHRNLIKIVSSCSNPGFKALI 754 (973)
Q Consensus 680 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv 754 (973)
++|...+.||+|+||.||+|+.. +++.||+|+++... ....+.+.+|+.+++++ +||||+++++++.+.+..++|
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv 88 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 88 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence 56888899999999999999964 68999999997542 33456788999999988 899999999999999999999
Q ss_pred EEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCCC
Q 048430 755 MQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGVD 834 (973)
Q Consensus 755 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 834 (973)
|||+++|+|.+++.... .+++..++.++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++......
T Consensus 89 ~e~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~ 164 (345)
T 3a8x_A 89 IEYVNGGDLMFHMQRQR-KLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG 164 (345)
T ss_dssp ECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTT
T ss_pred EeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEECCCCCEEEEeccccccccCCC
Confidence 99999999999998754 6999999999999999999999 7899999999999999999999999999998643222
Q ss_pred CcccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcc----cHHHHHHhhCCcchhhhcccc
Q 048430 835 PVTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEM----SLKQWVAESLPGAVTEVVDAN 910 (973)
Q Consensus 835 ~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~d~~ 910 (973)
......+||+.|+|||.+.+..++.++||||+||++|||++|+.||........ ....... .+....
T Consensus 165 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~--------~i~~~~ 235 (345)
T 3a8x_A 165 -DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQ--------VILEKQ 235 (345)
T ss_dssp -CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHH--------HHHHCC
T ss_pred -CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHH--------HHHcCC
Confidence 223445799999999999988999999999999999999999999965322110 0000000 000100
Q ss_pred cCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCH------HHHHHH
Q 048430 911 LLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINV------KDALAD 957 (973)
Q Consensus 911 l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~------~evl~~ 957 (973)
. ..+..++.++.+++.+||+.||++||++ +|+++|
T Consensus 236 ~------------~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~h 276 (345)
T 3a8x_A 236 I------------RIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 276 (345)
T ss_dssp C------------CCCTTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTS
T ss_pred C------------CCCCCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcC
Confidence 0 0111245668899999999999999995 677665
No 132
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=4.9e-38 Score=344.97 Aligned_cols=245 Identities=23% Similarity=0.234 Sum_probs=196.1
Q ss_pred cCCCCCccccccCceEEEEEEeC-CCeEEEEEEEeccc--hhhHHHHHHHHHHHHhc-cCCceeEEEeeeecCCeeEEEE
Q 048430 680 NGFGESNLLGSGSFDNVYKATLA-NGVSVAVKVFNLQE--DRALKSFDTECEVMRRI-RHRNLIKIVSSCSNPGFKALIM 755 (973)
Q Consensus 680 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 755 (973)
++|...++||+|+||+||+|+.. +++.||||++.... ......+..|+..+.++ +||||++++++|.+.+..++||
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~ 136 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT 136 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence 56888999999999999999975 79999999886432 23334555666666655 8999999999999999999999
Q ss_pred EecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCCCC
Q 048430 756 QYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGVDP 835 (973)
Q Consensus 756 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 835 (973)
||+ +++|.+++......+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++......
T Consensus 137 e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~-- 210 (311)
T 3p1a_A 137 ELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLH---SQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTA-- 210 (311)
T ss_dssp ECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECGGGCEEECCCTTCEECC----
T ss_pred ecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEECCCCCEEEccceeeeecccC--
Confidence 999 67999999887767999999999999999999999 789999999999999999999999999999876432
Q ss_pred cccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhcccccCCCC
Q 048430 836 VTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLLSRE 915 (973)
Q Consensus 836 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 915 (973)
.......||+.|+|||.+.+ .++.++|||||||++|||++|..|+... ...... ..+. .
T Consensus 211 ~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~----~~~~~~----~~~~------------~ 269 (311)
T 3p1a_A 211 GAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGG----EGWQQL----RQGY------------L 269 (311)
T ss_dssp ----CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSH----HHHHHH----TTTC------------C
T ss_pred CCCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCc----cHHHHH----hccC------------C
Confidence 22334569999999998765 7899999999999999999997765431 111110 0000 0
Q ss_pred chhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 916 DEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 916 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
....+..+++++.+++.+||+.||++|||++|+++|
T Consensus 270 ------~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 305 (311)
T 3p1a_A 270 ------PPEFTAGLSSELRSVLVMMLEPDPKLRATAEALLAL 305 (311)
T ss_dssp ------CHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred ------CcccccCCCHHHHHHHHHHcCCChhhCcCHHHHHhC
Confidence 001122356779999999999999999999999975
No 133
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=1e-38 Score=353.04 Aligned_cols=271 Identities=25% Similarity=0.437 Sum_probs=215.1
Q ss_pred cCCCCCccccccCceEEEEEEe-----CCCeEEEEEEEeccchhhHHHHHHHHHHHHhccCCceeEEEeeeecCC--eeE
Q 048430 680 NGFGESNLLGSGSFDNVYKATL-----ANGVSVAVKVFNLQEDRALKSFDTECEVMRRIRHRNLIKIVSSCSNPG--FKA 752 (973)
Q Consensus 680 ~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~--~~~ 752 (973)
++|...+.||+|+||.||+|+. .+++.||||++........+.+.+|++++++++||||+++++++...+ ..+
T Consensus 41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 120 (326)
T 2w1i_A 41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK 120 (326)
T ss_dssp GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCE
T ss_pred HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceE
Confidence 4677889999999999999984 468999999998766666788999999999999999999999986543 789
Q ss_pred EEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCC
Q 048430 753 LIMQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDG 832 (973)
Q Consensus 753 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~ 832 (973)
+||||+++++|.+++......+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++.....
T Consensus 121 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~ 197 (326)
T 2w1i_A 121 LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ 197 (326)
T ss_dssp EEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTTCEECCS
T ss_pred EEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEeccCCCcceEEEcCCCcEEEecCcchhhccc
Confidence 999999999999999987767999999999999999999999 78999999999999999999999999999987654
Q ss_pred CCCcc--cccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcc-----hhh
Q 048430 833 VDPVT--QTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGA-----VTE 905 (973)
Q Consensus 833 ~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~-----~~~ 905 (973)
..... .....++..|+|||...+..++.++|||||||++|||++|+.|+..... ............. +.+
T Consensus 198 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 274 (326)
T 2w1i_A 198 DKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPA---EFMRMIGNDKQGQMIVFHLIE 274 (326)
T ss_dssp SCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHH---HHHHHHCTTCCTHHHHHHHHH
T ss_pred cccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHH---HHHHhhccccchhhhHHHHHH
Confidence 33221 2234577889999998888899999999999999999999998753210 0111100000000 001
Q ss_pred hcccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHHHHH
Q 048430 906 VVDANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIKKILT 966 (973)
Q Consensus 906 ~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~~~~~ 966 (973)
.+.... ....+..++.++.+++.+||+.||++||++.|+++.|+++++++.
T Consensus 275 ~~~~~~----------~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~l~ 325 (326)
T 2w1i_A 275 LLKNNG----------RLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQMA 325 (326)
T ss_dssp HHHTTC----------CCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred HhhcCC----------CCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHhc
Confidence 111100 001123456779999999999999999999999999999998865
No 134
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=6.9e-39 Score=356.40 Aligned_cols=277 Identities=23% Similarity=0.341 Sum_probs=200.2
Q ss_pred hcCCCCCccccccCceEEEEEEeCCCeEEEEEEEeccchhhHHHHHHHHHH--HHhccCCceeEEEeeee-----cCCee
Q 048430 679 TNGFGESNLLGSGSFDNVYKATLANGVSVAVKVFNLQEDRALKSFDTECEV--MRRIRHRNLIKIVSSCS-----NPGFK 751 (973)
Q Consensus 679 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~--l~~l~h~niv~l~~~~~-----~~~~~ 751 (973)
.++|...+.||+|+||.||+|+. +++.||||++..... ..+..|.++ +..++||||+++++++. .....
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~---~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 87 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANR---QNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEY 87 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGGH---HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccch---hhHHHHHHHHHHHhccCcchhhheecccccccCCCceE
Confidence 46788899999999999999987 589999999975432 334444444 44589999999997542 33467
Q ss_pred EEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCC---------CeEEccCCCCcEEeCCCCcEEEe
Q 048430 752 ALIMQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYST---------PIIHCDLKPNNVLLDDDMVAHLG 822 (973)
Q Consensus 752 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~---------~ivH~dlk~~Nill~~~~~~kl~ 822 (973)
++||||+++|+|.+++.... .++..+..++.|++.||+||| +. +|+||||||+||+++.++.+||+
T Consensus 88 ~lv~e~~~~g~L~~~l~~~~--~~~~~~~~i~~qi~~~L~~LH---~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~ 162 (336)
T 3g2f_A 88 LLVMEYYPNGSLXKYLSLHT--SDWVSSCRLAHSVTRGLAYLH---TELPRGDHYKPAISHRDLNSRNVLVKNDGTCVIS 162 (336)
T ss_dssp EEEECCCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHHH---CCBCCGGGCBCCEECSSCSGGGEEECTTSCEEEC
T ss_pred EEEEecCCCCcHHHHHhhcc--cchhHHHHHHHHHHHHHHHHH---hhhccccccccceeecccccceEEEcCCCcEEEe
Confidence 89999999999999998764 689999999999999999999 67 99999999999999999999999
Q ss_pred ecccccccCCCC-------CcccccccccccccCccCCCC-------CCCCcchhHHHHHHHHHHHHhCCCCCCccccCc
Q 048430 823 DFGIAKLLDGVD-------PVTQTMTLATIGYMAPEYGSE-------GIVSISGDVYSFGILMMETFTRRKPTNEMFTGE 888 (973)
Q Consensus 823 Dfgla~~~~~~~-------~~~~~~~~~~~~y~aPE~~~~-------~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~ 888 (973)
|||+++...... ........||+.|+|||.+.+ ..++.++|||||||++|||++|+.||.......
T Consensus 163 DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~ 242 (336)
T 3g2f_A 163 DFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVP 242 (336)
T ss_dssp CCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCC
T ss_pred eccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchh
Confidence 999998764321 112234469999999998776 456789999999999999999988764322211
Q ss_pred ccHHHHHHhhCCcc----hhhhcccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHHH
Q 048430 889 MSLKQWVAESLPGA----VTEVVDANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIKKI 964 (973)
Q Consensus 889 ~~~~~~~~~~~~~~----~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~~~ 964 (973)
.....+........ ....+..... .............+++++.+++.+||+.||++|||++|+++.|+++...
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~ 319 (336)
T 3g2f_A 243 EYQMAFQTEVGNHPTFEDMQVLVSREKQ---RPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMI 319 (336)
T ss_dssp CCCCTTHHHHCSSCCHHHHHHHHTTSCC---CCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HHHHhhhcccCCCchHHHHHhhhccccc---CCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHH
Confidence 10000000000000 0000000000 0000011111234677899999999999999999999999999999865
Q ss_pred HHh
Q 048430 965 LTQ 967 (973)
Q Consensus 965 ~~~ 967 (973)
+.+
T Consensus 320 ~~~ 322 (336)
T 3g2f_A 320 WER 322 (336)
T ss_dssp CCC
T ss_pred HHh
Confidence 433
No 135
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=6e-39 Score=348.76 Aligned_cols=251 Identities=20% Similarity=0.333 Sum_probs=204.0
Q ss_pred cCCCCCccccccCceEEEEEEeC-CC-------eEEEEEEEeccchhhHHHHHHHHHHHHhccCCceeEEEeeeecCCee
Q 048430 680 NGFGESNLLGSGSFDNVYKATLA-NG-------VSVAVKVFNLQEDRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFK 751 (973)
Q Consensus 680 ~~~~~~~~lg~G~~g~Vy~~~~~-~~-------~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 751 (973)
++|...+.||+|+||.||+|+.. ++ ..||+|++........+.+.+|+.++++++||||+++++++.+++..
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 87 (289)
T 4fvq_A 8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDEN 87 (289)
T ss_dssp GGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCC
T ss_pred hHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCC
Confidence 56778899999999999999854 23 57999999776666678899999999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCc--------EEEee
Q 048430 752 ALIMQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMV--------AHLGD 823 (973)
Q Consensus 752 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~--------~kl~D 823 (973)
++||||+++|+|.+++......+++..+..++.|++.||+||| +.+|+||||||+||+++.++. +||+|
T Consensus 88 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~D 164 (289)
T 4fvq_A 88 ILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLE---ENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSD 164 (289)
T ss_dssp EEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEEECCBGGGTBCCEEEECC
T ss_pred EEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHh---hCCeECCCcCcceEEEecCCcccccccceeeecc
Confidence 9999999999999999987666999999999999999999999 799999999999999998887 99999
Q ss_pred cccccccCCCCCcccccccccccccCccCCCC-CCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcc
Q 048430 824 FGIAKLLDGVDPVTQTMTLATIGYMAPEYGSE-GIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGA 902 (973)
Q Consensus 824 fgla~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 902 (973)
||.+..... .....+++.|+|||.+.+ ..++.++|||||||++|||++|..|+........ ........ .
T Consensus 165 fg~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~-~~~~~~~~--~- 235 (289)
T 4fvq_A 165 PGISITVLP-----KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQR-KLQFYEDR--H- 235 (289)
T ss_dssp CCSCTTTSC-----HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH-HHHHHHTT--C-
T ss_pred CcccccccC-----ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHH-HHHHhhcc--C-
Confidence 999875432 223458899999998876 6789999999999999999996655432211111 11111100 0
Q ss_pred hhhhcccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHH
Q 048430 903 VTEVVDANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIKK 963 (973)
Q Consensus 903 ~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~~ 963 (973)
... ..++.++.+++.+||+.||++|||++|++++|+++..
T Consensus 236 -------~~~--------------~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~ 275 (289)
T 4fvq_A 236 -------QLP--------------APKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFT 275 (289)
T ss_dssp -------CCC--------------CCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC-
T ss_pred -------CCC--------------CCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence 000 0113347789999999999999999999999988754
No 136
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2e-38 Score=351.58 Aligned_cols=263 Identities=25% Similarity=0.434 Sum_probs=206.3
Q ss_pred cCCCCCccccccCceEEEEEEeCC-----CeEEEEEEEeccc-hhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEE
Q 048430 680 NGFGESNLLGSGSFDNVYKATLAN-----GVSVAVKVFNLQE-DRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKAL 753 (973)
Q Consensus 680 ~~~~~~~~lg~G~~g~Vy~~~~~~-----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 753 (973)
++|...+.||+|+||.||+|.... +..||||+++... ......+.+|+.++++++||||+++++++.+.+..++
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 123 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI 123 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEE
Confidence 345567899999999999998542 3469999987553 3345678999999999999999999999999999999
Q ss_pred EEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCC
Q 048430 754 IMQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGV 833 (973)
Q Consensus 754 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 833 (973)
||||+++|+|.+++......+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 124 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~ 200 (333)
T 1mqb_A 124 ITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLA---NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD 200 (333)
T ss_dssp EEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCCCC-------
T ss_pred EEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChheEEECCCCcEEECCCCcchhhccc
Confidence 99999999999999887668999999999999999999999 789999999999999999999999999999876432
Q ss_pred CCc--ccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCccccCcccHHHHHHhhCCcchhhhcccc
Q 048430 834 DPV--TQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFT-RRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDAN 910 (973)
Q Consensus 834 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 910 (973)
... ......+|+.|+|||.+....++.++|||||||++|||++ |+.||...... .....+.. +
T Consensus 201 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~--~~~~~~~~---~--------- 266 (333)
T 1mqb_A 201 PEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNH--EVMKAIND---G--------- 266 (333)
T ss_dssp ----------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHHHHHHT---T---------
T ss_pred cccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHH--HHHHHHHC---C---------
Confidence 211 1222346788999999888899999999999999999999 99998653211 11111111 0
Q ss_pred cCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHHHHHhhc
Q 048430 911 LLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIKKILTQAL 969 (973)
Q Consensus 911 l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~~~~~~~~ 969 (973)
.. ...+..++.++.+++.+||+.+|++||++.|++++|+++.+......
T Consensus 267 ~~----------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~~~~ 315 (333)
T 1mqb_A 267 FR----------LPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPDSLK 315 (333)
T ss_dssp CC----------CCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSGGGGG
T ss_pred Cc----------CCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcchhhh
Confidence 00 00111345678999999999999999999999999999887655443
No 137
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=3.2e-38 Score=353.33 Aligned_cols=253 Identities=21% Similarity=0.230 Sum_probs=195.3
Q ss_pred hcCCCCCccccccCceEEEEEEeC-CCeEEEEEEEeccchhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEEEEe
Q 048430 679 TNGFGESNLLGSGSFDNVYKATLA-NGVSVAVKVFNLQEDRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALIMQY 757 (973)
Q Consensus 679 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 757 (973)
.++|...+.||+|+||.||+|+.. +++.||||++..... ..+.+.+|+.++++++||||+++++++..++..++||||
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 97 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEY 97 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEe
Confidence 457888999999999999999965 789999999875432 236788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCc--EEEeecccccccCCCCC
Q 048430 758 MPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMV--AHLGDFGIAKLLDGVDP 835 (973)
Q Consensus 758 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~--~kl~Dfgla~~~~~~~~ 835 (973)
+++|+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++. +||+|||+++.... .
T Consensus 98 ~~~~~L~~~l~~~~-~~~~~~~~~i~~ql~~~L~~LH---~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~--~ 171 (361)
T 3uc3_A 98 ASGGELYERICNAG-RFSEDEARFFFQQLLSGVSYCH---SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL--H 171 (361)
T ss_dssp CCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCSCCCCGGGEEECSSSSCCEEECCCCCC--------
T ss_pred CCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCceEEEeecCccccccc--c
Confidence 99999999997654 6999999999999999999999 799999999999999987765 99999999875322 1
Q ss_pred cccccccccccccCccCCCCCCCCcc-hhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhcccccCCC
Q 048430 836 VTQTMTLATIGYMAPEYGSEGIVSIS-GDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLLSR 914 (973)
Q Consensus 836 ~~~~~~~~~~~y~aPE~~~~~~~~~~-sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 914 (973)
.......||+.|+|||.+.+..++.+ +||||+||++|||++|+.||....... .....+....... ...
T Consensus 172 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~-~~~~~~~~~~~~~--------~~~- 241 (361)
T 3uc3_A 172 SQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPR-DYRKTIQRILSVK--------YSI- 241 (361)
T ss_dssp ---------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CC-CHHHHHHHHHTTC--------CCC-
T ss_pred CCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHH-HHHHHHHHHhcCC--------CCC-
Confidence 22334569999999998877776655 899999999999999999997643322 2222222111100 000
Q ss_pred CchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 915 EDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
+....+++++.+++.+||+.||++|||+.|+++|
T Consensus 242 ---------~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 242 ---------PDDIRISPECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp ---------CTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred ---------CCcCCCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 0001234568899999999999999999999987
No 138
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=2e-38 Score=352.09 Aligned_cols=269 Identities=25% Similarity=0.375 Sum_probs=216.5
Q ss_pred HHHHhcCCCCCccccccCceEEEEEEeC-C-----CeEEEEEEEeccc-hhhHHHHHHHHHHHHhc-cCCceeEEEeeee
Q 048430 675 LQQATNGFGESNLLGSGSFDNVYKATLA-N-----GVSVAVKVFNLQE-DRALKSFDTECEVMRRI-RHRNLIKIVSSCS 746 (973)
Q Consensus 675 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~-----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~ 746 (973)
++...++|...+.||+|+||.||+|... + ...||+|+++... ....+.+.+|+.+++++ +||||+++++++.
T Consensus 41 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 120 (333)
T 2i1m_A 41 WEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACT 120 (333)
T ss_dssp GBCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred ccCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEe
Confidence 3445678888999999999999999853 2 3479999987553 33457899999999999 8999999999999
Q ss_pred cCCeeEEEEEecCCCCHHHHhhhC-------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEe
Q 048430 747 NPGFKALIMQYMPQGSLEKWLYSH-------------NYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLL 813 (973)
Q Consensus 747 ~~~~~~lv~e~~~~gsL~~~l~~~-------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill 813 (973)
+.+..++||||+++|+|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+||++
T Consensus 121 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~ 197 (333)
T 2i1m_A 121 HGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLL 197 (333)
T ss_dssp SSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGCEE
T ss_pred cCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHh---cCCcccCCcccceEEE
Confidence 999999999999999999999753 235799999999999999999999 7899999999999999
Q ss_pred CCCCcEEEeecccccccCCCCC-cccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCccccCcccH
Q 048430 814 DDDMVAHLGDFGIAKLLDGVDP-VTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFT-RRKPTNEMFTGEMSL 891 (973)
Q Consensus 814 ~~~~~~kl~Dfgla~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~ellt-g~~p~~~~~~~~~~~ 891 (973)
+.++.+||+|||+++....... .......+|+.|+|||...+..++.++|||||||++|||++ |..||....... ..
T Consensus 198 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~-~~ 276 (333)
T 2i1m_A 198 TNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNS-KF 276 (333)
T ss_dssp EGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSH-HH
T ss_pred CCCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhH-HH
Confidence 9999999999999986543222 22334457889999999888889999999999999999999 889986533221 11
Q ss_pred HHHHHhhCCcchhhhcccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHHHHHhhc
Q 048430 892 KQWVAESLPGAVTEVVDANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIKKILTQAL 969 (973)
Q Consensus 892 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~~~~~~~~ 969 (973)
...+...... ..+..+++.+.+++.+||+.||++||+++|++++|+++.+...++.
T Consensus 277 ~~~~~~~~~~----------------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~~~r 332 (333)
T 2i1m_A 277 YKLVKDGYQM----------------------AQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQEDRRER 332 (333)
T ss_dssp HHHHHHTCCC----------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHhcCCCC----------------------CCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHhhhccC
Confidence 2222111100 0011234568899999999999999999999999999988766553
No 139
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=1.1e-38 Score=352.48 Aligned_cols=261 Identities=25% Similarity=0.444 Sum_probs=196.4
Q ss_pred HHhcCCCCCccccccCceEEEEEEeCC-C---eEEEEEEEecc--chhhHHHHHHHHHHHHhccCCceeEEEeeeecCCe
Q 048430 677 QATNGFGESNLLGSGSFDNVYKATLAN-G---VSVAVKVFNLQ--EDRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGF 750 (973)
Q Consensus 677 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~-~---~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 750 (973)
...++|...+.||+|+||.||+|+... + ..||||+++.. .....+.+.+|++++++++||||+++++++.....
T Consensus 20 i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 99 (323)
T 3qup_A 20 IPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRA 99 (323)
T ss_dssp CC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC--
T ss_pred cChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecccc
Confidence 345678999999999999999998643 3 27999998754 34456789999999999999999999999977665
Q ss_pred e------EEEEEecCCCCHHHHhhhCC-----CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcE
Q 048430 751 K------ALIMQYMPQGSLEKWLYSHN-----YSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVA 819 (973)
Q Consensus 751 ~------~lv~e~~~~gsL~~~l~~~~-----~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~ 819 (973)
. ++||||+++|+|.+++.... ..+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+
T Consensus 100 ~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~ivH~Dikp~NIli~~~~~~ 176 (323)
T 3qup_A 100 KGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLS---SRNFIHRDLAARNCMLAEDMTV 176 (323)
T ss_dssp -----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTSCE
T ss_pred ccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHH---cCCcccCCCCcceEEEcCCCCE
Confidence 5 99999999999999996532 25899999999999999999999 7899999999999999999999
Q ss_pred EEeecccccccCCCCCc-ccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCccccCcccHHHHHHh
Q 048430 820 HLGDFGIAKLLDGVDPV-TQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFT-RRKPTNEMFTGEMSLKQWVAE 897 (973)
Q Consensus 820 kl~Dfgla~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~ 897 (973)
||+|||+++........ ......+++.|+|||.+.+..++.++|||||||++|||++ |+.||......+ ....+..
T Consensus 177 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~--~~~~~~~ 254 (323)
T 3qup_A 177 CVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAE--IYNYLIG 254 (323)
T ss_dssp EECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG--HHHHHHT
T ss_pred EEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHH--HHHHHhc
Confidence 99999999876433222 2233457889999999988899999999999999999999 899987533221 1111111
Q ss_pred hCCcchhhhcccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHHH
Q 048430 898 SLPGAVTEVVDANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIKKI 964 (973)
Q Consensus 898 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~~~ 964 (973)
.. .. ..+..+++++.+++.+||+.||++||++.|+++.|+++.+.
T Consensus 255 ~~-----------~~-----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~ 299 (323)
T 3qup_A 255 GN-----------RL-----------KQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGH 299 (323)
T ss_dssp TC-----------CC-----------CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred CC-----------CC-----------CCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 00 00 00112456789999999999999999999999999998754
No 140
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=1.2e-38 Score=351.12 Aligned_cols=267 Identities=25% Similarity=0.395 Sum_probs=211.9
Q ss_pred CCCCccccccCceEEEEEEeC-----CCeEEEEEEEeccc-hhhHHHHHHHHHHHHhccCCceeEEEeeeec--CCeeEE
Q 048430 682 FGESNLLGSGSFDNVYKATLA-----NGVSVAVKVFNLQE-DRALKSFDTECEVMRRIRHRNLIKIVSSCSN--PGFKAL 753 (973)
Q Consensus 682 ~~~~~~lg~G~~g~Vy~~~~~-----~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~l 753 (973)
|...+.||+|+||.||++.+. +++.||||+++... ....+.+.+|++++++++||||+++++++.+ ....++
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 112 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL 112 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence 377899999999999998642 68999999997653 3446789999999999999999999999976 467899
Q ss_pred EEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCC
Q 048430 754 IMQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGV 833 (973)
Q Consensus 754 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 833 (973)
||||+++|+|.+++... .+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++......
T Consensus 113 v~e~~~~~~L~~~l~~~--~~~~~~~~~i~~~l~~~l~~LH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 187 (318)
T 3lxp_A 113 VMEYVPLGSLRDYLPRH--SIGLAQLLLFAQQICEGMAYLH---AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEG 187 (318)
T ss_dssp EECCCTTCBHHHHGGGS--CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCGGGCEECCTT
T ss_pred EEecccCCcHHHHHhhC--CCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCchheEEEcCCCCEEECCcccccccccc
Confidence 99999999999999876 4899999999999999999999 789999999999999999999999999999876543
Q ss_pred CCc--ccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCc------chhh
Q 048430 834 DPV--TQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPG------AVTE 905 (973)
Q Consensus 834 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~------~~~~ 905 (973)
... ......+|..|+|||.+.+..++.++|||||||++|||++|+.||....... ..+. .... ...+
T Consensus 188 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~---~~~~--~~~~~~~~~~~~~~ 262 (318)
T 3lxp_A 188 HEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKF---LELI--GIAQGQMTVLRLTE 262 (318)
T ss_dssp CSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHH---HHHH--CSCCHHHHHHHHHH
T ss_pred ccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhh---hhhh--cccccchhHHHHHH
Confidence 321 2233457888999999988889999999999999999999999986422110 0000 0000 0111
Q ss_pred hcccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHHHHHhh
Q 048430 906 VVDANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIKKILTQA 968 (973)
Q Consensus 906 ~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~~~~~~~ 968 (973)
.++.... ...+..++.++.+++.+||+.||++||+++|+++.|+++.+.++.+
T Consensus 263 ~~~~~~~----------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~~~ 315 (318)
T 3lxp_A 263 LLERGER----------LPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQGQ 315 (318)
T ss_dssp HHHTTCC----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHC-
T ss_pred HHhcccC----------CCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhccC
Confidence 1111110 0112235677999999999999999999999999999999988754
No 141
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=4.5e-39 Score=356.22 Aligned_cols=268 Identities=24% Similarity=0.340 Sum_probs=212.6
Q ss_pred cCCCCCccccccCceEEEEEEe-----CCCeEEEEEEEeccchhhHHHHHHHHHHHHhccCCceeEEEeeee--cCCeeE
Q 048430 680 NGFGESNLLGSGSFDNVYKATL-----ANGVSVAVKVFNLQEDRALKSFDTECEVMRRIRHRNLIKIVSSCS--NPGFKA 752 (973)
Q Consensus 680 ~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~--~~~~~~ 752 (973)
++|...+.||+|+||.||+|+. .+++.||||++........+.+.+|++++++++||||+++++++. +....+
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 102 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR 102 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEE
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEE
Confidence 5678889999999999999984 468999999998776666778999999999999999999999886 456789
Q ss_pred EEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCC
Q 048430 753 LIMQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDG 832 (973)
Q Consensus 753 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~ 832 (973)
+||||+++++|.+++......+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~ 179 (327)
T 3lxl_A 103 LVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPL 179 (327)
T ss_dssp EEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCGGGCEECCT
T ss_pred EEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCChhhEEECCCCCEEEcccccceeccc
Confidence 999999999999999876557999999999999999999999 79999999999999999999999999999987653
Q ss_pred CCCc--ccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhC----Ccc---h
Q 048430 833 VDPV--TQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESL----PGA---V 903 (973)
Q Consensus 833 ~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~----~~~---~ 903 (973)
.... ......+|..|+|||.+.+..++.++|||||||++|||++|+.||..... ....... ... .
T Consensus 180 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~------~~~~~~~~~~~~~~~~~~ 253 (327)
T 3lxl_A 180 DKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSA------EFLRMMGCERDVPALSRL 253 (327)
T ss_dssp TCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHH------HHHHHCC----CCHHHHH
T ss_pred CCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccc------hhhhhcccccccccHHHH
Confidence 3322 22334688889999998888899999999999999999999999754211 1111000 000 0
Q ss_pred hhhcccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHHHHH
Q 048430 904 TEVVDANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIKKILT 966 (973)
Q Consensus 904 ~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~~~~~ 966 (973)
.+.+..... ...+..+++++.+++.+||+.||++||+++|++++|+.+.....
T Consensus 254 ~~~~~~~~~----------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~ 306 (327)
T 3lxl_A 254 LELLEEGQR----------LPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSR 306 (327)
T ss_dssp HHHHHTTCC----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC-----
T ss_pred HHHhhcccC----------CCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhc
Confidence 111111100 01123456779999999999999999999999999998875543
No 142
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=1.9e-38 Score=341.29 Aligned_cols=251 Identities=23% Similarity=0.367 Sum_probs=204.3
Q ss_pred cCCCCCccccccCceEEEEEEeCCCeEEEEEEEeccc--hhhHHHHHHHHHHHHhccCCceeEEEeeeecC--CeeEEEE
Q 048430 680 NGFGESNLLGSGSFDNVYKATLANGVSVAVKVFNLQE--DRALKSFDTECEVMRRIRHRNLIKIVSSCSNP--GFKALIM 755 (973)
Q Consensus 680 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv~ 755 (973)
++|...+.||+|+||.||+|+.. ++.||||+++... ....+.+.+|+.++++++||||+++++++.++ +..++||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (271)
T 3kmu_A 10 KQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLIT 88 (271)
T ss_dssp GGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEE
T ss_pred HHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeee
Confidence 56888899999999999999986 8999999997653 34457899999999999999999999999876 7889999
Q ss_pred EecCCCCHHHHhhhCCC-CCCHHHHHHHHHHHHHHHHHhhhcCCCC--eEEccCCCCcEEeCCCCcEEEeecccccccCC
Q 048430 756 QYMPQGSLEKWLYSHNY-SLTIRQRLDIMIDVASALEYLHHGYSTP--IIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDG 832 (973)
Q Consensus 756 e~~~~gsL~~~l~~~~~-~l~~~~~~~i~~~i~~~L~~LH~~~~~~--ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~ 832 (973)
||+++|+|.+++..... .+++.++..++.|++.||+||| +.+ |+||||||+||+++.++.++++|||++.....
T Consensus 89 e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~ 165 (271)
T 3kmu_A 89 HWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLH---TLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQS 165 (271)
T ss_dssp ECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHT---TSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSC
T ss_pred cccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHh---cCCCceecCCCccceEEEcCCcceeEEeccceeeecc
Confidence 99999999999987653 5899999999999999999999 778 99999999999999999999999998764321
Q ss_pred CCCcccccccccccccCccCCCCCCCC---cchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhccc
Q 048430 833 VDPVTQTMTLATIGYMAPEYGSEGIVS---ISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDA 909 (973)
Q Consensus 833 ~~~~~~~~~~~~~~y~aPE~~~~~~~~---~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 909 (973)
....+|+.|+|||.+.+..++ .++|||||||++|||++|+.||......+. ........
T Consensus 166 ------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~-~~~~~~~~----------- 227 (271)
T 3kmu_A 166 ------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEI-GMKVALEG----------- 227 (271)
T ss_dssp ------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHH-HHHHHHSC-----------
T ss_pred ------cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHH-HHHHHhcC-----------
Confidence 234689999999987765444 489999999999999999999865322111 00100000
Q ss_pred ccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHH
Q 048430 910 NLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIKK 963 (973)
Q Consensus 910 ~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~~ 963 (973)
... ..+..++.++.+++.+||+.||++|||++|+++.|+++.+
T Consensus 228 -~~~----------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 228 -LRP----------TIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp -CCC----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred -CCC----------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 000 0012345678999999999999999999999999998754
No 143
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=1.1e-38 Score=344.77 Aligned_cols=260 Identities=26% Similarity=0.414 Sum_probs=211.5
Q ss_pred HhcCCCCCccccccCceEEEEEEeCCCeEEEEEEEeccchhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEEEEe
Q 048430 678 ATNGFGESNLLGSGSFDNVYKATLANGVSVAVKVFNLQEDRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALIMQY 757 (973)
Q Consensus 678 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 757 (973)
..++|...+.||+|+||.||+|...+++.||||+++.... ..+.+.+|++++++++||||+++++++.+ +..++||||
T Consensus 11 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~ 88 (279)
T 1qpc_A 11 PRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEY 88 (279)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEEC
T ss_pred CHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCcc-cHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEEEEec
Confidence 3467888899999999999999998889999999875432 34689999999999999999999999864 468999999
Q ss_pred cCCCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCCCCc
Q 048430 758 MPQGSLEKWLYSHN-YSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGVDPV 836 (973)
Q Consensus 758 ~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 836 (973)
+++++|.+++.... ..+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||.+.........
T Consensus 89 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 165 (279)
T 1qpc_A 89 MENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYT 165 (279)
T ss_dssp CTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEE
T ss_pred CCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHhhEEEcCCCCEEECCCcccccccCcccc
Confidence 99999999997542 25899999999999999999999 799999999999999999999999999999876543333
Q ss_pred ccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCccccCcccHHHHHHhhCCcchhhhcccccCCCC
Q 048430 837 TQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFT-RRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLLSRE 915 (973)
Q Consensus 837 ~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 915 (973)
......++..|+|||......++.++||||||+++|||++ |+.||...... .....+.. + ...
T Consensus 166 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--~~~~~~~~---~---------~~~-- 229 (279)
T 1qpc_A 166 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP--EVIQNLER---G---------YRM-- 229 (279)
T ss_dssp CCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--HHHHHHHT---T---------CCC--
T ss_pred cccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHH--HHHHHHhc---c---------cCC--
Confidence 3334457889999999888889999999999999999999 89998653211 11111111 0 000
Q ss_pred chhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHHHHH
Q 048430 916 DEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIKKILT 966 (973)
Q Consensus 916 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~~~~~ 966 (973)
..+..+++++.+++.+||+.+|++||+++++++.|+++.....
T Consensus 230 --------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~ 272 (279)
T 1qpc_A 230 --------VRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATE 272 (279)
T ss_dssp --------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC-
T ss_pred --------CCcccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHhcc
Confidence 0011345678999999999999999999999999999876643
No 144
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=4.3e-38 Score=353.49 Aligned_cols=284 Identities=23% Similarity=0.253 Sum_probs=214.5
Q ss_pred cccccCCCCHHHHHHHhcCCCCCccccccCceEEEEEEe-CCCeEEEEEEEeccchhhHHHHHHHHHHHHhcc-----CC
Q 048430 663 NLATLSRISYHELQQATNGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQEDRALKSFDTECEVMRRIR-----HR 736 (973)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-----h~ 736 (973)
.......+++.+.....++|...++||+|+||.||+|+. .+++.||||+++.. ......+..|+.+++.++ ||
T Consensus 18 ~~~~~~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~ 96 (360)
T 3llt_A 18 GDDEIVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNN 96 (360)
T ss_dssp --CGGGSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGG
T ss_pred cCccceeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCC
Confidence 344556667777777788999999999999999999996 57899999998643 334467788999999986 99
Q ss_pred ceeEEEeeeecCCeeEEEEEecCCCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCC
Q 048430 737 NLIKIVSSCSNPGFKALIMQYMPQGSLEKWLYSHN-YSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDD 815 (973)
Q Consensus 737 niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~ 815 (973)
||+++++++...+..++||||+ +++|.+++.... ..+++.++..++.||+.||+||| +.+|+||||||+||+++.
T Consensus 97 ~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~ 172 (360)
T 3llt_A 97 NIVKYHGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLR---KMSLTHTDLKPENILLDD 172 (360)
T ss_dssp GBCCEEEEEEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESC
T ss_pred CeecccceeeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCcccEEEcc
Confidence 9999999999999999999999 889999998764 35899999999999999999999 799999999999999975
Q ss_pred -------------------------CCcEEEeecccccccCCCCCcccccccccccccCccCCCCCCCCcchhHHHHHHH
Q 048430 816 -------------------------DMVAHLGDFGIAKLLDGVDPVTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGIL 870 (973)
Q Consensus 816 -------------------------~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvv 870 (973)
++.+||+|||+++..... .....||+.|+|||.+.+..++.++|||||||+
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~i 248 (360)
T 3llt_A 173 PYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY----HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCV 248 (360)
T ss_dssp TTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSC----CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHH
T ss_pred ccccccccchhcccccccccccccCCCCEEEEeccCceecCCC----CcCccCcccccCcHHHcCCCCCCccchHHHHHH
Confidence 789999999999865422 234568999999999999999999999999999
Q ss_pred HHHHHhCCCCCCccccCcccHHHHHHhhC---Ccch---------hhhcccccCCCCchhhhhhH-----------HhHH
Q 048430 871 MMETFTRRKPTNEMFTGEMSLKQWVAESL---PGAV---------TEVVDANLLSREDEEDADDF-----------ATKK 927 (973)
Q Consensus 871 l~elltg~~p~~~~~~~~~~~~~~~~~~~---~~~~---------~~~~d~~l~~~~~~~~~~~~-----------~~~~ 927 (973)
+|||++|+.||...... .....+.... +... ...++............... ....
T Consensus 249 l~ell~g~~pf~~~~~~--~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 326 (360)
T 3llt_A 249 LAELYTGSLLFRTHEHM--EHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKI 326 (360)
T ss_dssp HHHHHHSSCSCCCSSHH--HHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHH
T ss_pred HHHHHHCCCCCCCCcHH--HHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhccccccc
Confidence 99999999999753211 1111111111 1000 00000000000000000000 0001
Q ss_pred HHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 928 TCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 928 ~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
...+.+.+++.+||+.||++|||++|+++|
T Consensus 327 ~~~~~l~~li~~~L~~dP~~Rpta~elL~h 356 (360)
T 3llt_A 327 IKHELFCDFLYSILQIDPTLRPSPAELLKH 356 (360)
T ss_dssp CCCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred chHHHHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 123668899999999999999999999875
No 145
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=2e-38 Score=353.22 Aligned_cols=252 Identities=22% Similarity=0.352 Sum_probs=197.8
Q ss_pred hcCCCCCccccccCceEEEEEEeCCCeEEEEEEEeccc--hhhHHHHHHHHHHHHhccC--CceeEEEeeeecCCeeEEE
Q 048430 679 TNGFGESNLLGSGSFDNVYKATLANGVSVAVKVFNLQE--DRALKSFDTECEVMRRIRH--RNLIKIVSSCSNPGFKALI 754 (973)
Q Consensus 679 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h--~niv~l~~~~~~~~~~~lv 754 (973)
.++|...+.||+|+||.||+|...+++.||||++.... ....+.+.+|+.++++++| |||+++++++......++|
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 87 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 87 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEE
Confidence 35688899999999999999998889999999987543 3445788999999999976 9999999999999999999
Q ss_pred EEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCCC
Q 048430 755 MQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGVD 834 (973)
Q Consensus 755 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 834 (973)
|| +.+++|.+++.... .+++.++..++.|++.||+||| +.+|+||||||+||+++ ++.+||+|||+++......
T Consensus 88 ~e-~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~al~~lH---~~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~ 161 (343)
T 3dbq_A 88 ME-CGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDT 161 (343)
T ss_dssp EC-CCSEEHHHHHHHSC-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC----
T ss_pred Ee-CCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCcceEEEE-CCcEEEeecccccccCccc
Confidence 99 45789999998865 7999999999999999999999 78999999999999997 5789999999998764332
Q ss_pred Cc-ccccccccccccCccCCCC-----------CCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcc
Q 048430 835 PV-TQTMTLATIGYMAPEYGSE-----------GIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGA 902 (973)
Q Consensus 835 ~~-~~~~~~~~~~y~aPE~~~~-----------~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 902 (973)
.. ......||+.|+|||.+.. ..++.++|||||||++|||++|+.||.........+..
T Consensus 162 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~--------- 232 (343)
T 3dbq_A 162 TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHA--------- 232 (343)
T ss_dssp --------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHH---------
T ss_pred ccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHH---------
Confidence 22 2334579999999997643 67899999999999999999999999653221111111
Q ss_pred hhhhcccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 048430 903 VTEVVDANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADL 958 (973)
Q Consensus 903 ~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L 958 (973)
.+++...... +..++.++.+++.+||+.||++|||+.|+++|-
T Consensus 233 ---~~~~~~~~~~----------~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp 275 (343)
T 3dbq_A 233 ---IIDPNHEIEF----------PDIPEKDLQDVLKCCLKRDPKQRISIPELLAHP 275 (343)
T ss_dssp ---HHCTTSCCCC----------CCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred ---HhcCCcccCC----------cccCCHHHHHHHHHHcCCChhHCCCHHHHHhCc
Confidence 1111110000 011234588999999999999999999999874
No 146
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=1.1e-37 Score=340.19 Aligned_cols=264 Identities=19% Similarity=0.225 Sum_probs=207.7
Q ss_pred HhcCCCCCccccccCceEEEEEEe-CCCeEEEEEEEeccchhhHHHHHHHHHHHHhccCCceeEEEeee-ecCCeeEEEE
Q 048430 678 ATNGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQEDRALKSFDTECEVMRRIRHRNLIKIVSSC-SNPGFKALIM 755 (973)
Q Consensus 678 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~-~~~~~~~lv~ 755 (973)
..++|...+.||+|+||.||+|+. .+++.||||++..... .+.+.+|+.+++.++|++++..++++ ...+..++||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 84 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM 84 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc--chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEE
Confidence 457899999999999999999995 6799999998764432 24588899999999987766666554 6778889999
Q ss_pred EecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEe---CCCCcEEEeecccccccCC
Q 048430 756 QYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLL---DDDMVAHLGDFGIAKLLDG 832 (973)
Q Consensus 756 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill---~~~~~~kl~Dfgla~~~~~ 832 (973)
||+ +++|.+++......+++.++..++.|++.||+||| +.+|+||||||+||++ +.++.+||+|||+++....
T Consensus 85 e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~ 160 (296)
T 4hgt_A 85 ELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD 160 (296)
T ss_dssp ECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred Ecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeeeeccCCCCeEEEecCccceeccC
Confidence 999 89999999876667999999999999999999999 7899999999999999 7889999999999987654
Q ss_pred CCCc------ccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcc--cHHHHHHhhCCcchh
Q 048430 833 VDPV------TQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEM--SLKQWVAESLPGAVT 904 (973)
Q Consensus 833 ~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~--~~~~~~~~~~~~~~~ 904 (973)
.... ......||+.|+|||...+..++.++|||||||++|||++|+.||........ .+...........
T Consensus 161 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~-- 238 (296)
T 4hgt_A 161 ARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTP-- 238 (296)
T ss_dssp TTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSC--
T ss_pred cccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccch--
Confidence 3221 22345799999999999998999999999999999999999999976432221 1111111100000
Q ss_pred hhcccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHHHHH
Q 048430 905 EVVDANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIKKILT 966 (973)
Q Consensus 905 ~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~~~~~ 966 (973)
.......+++++.+++.+||+.||++||+++|+++.|+++.+...
T Consensus 239 -----------------~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~ 283 (296)
T 4hgt_A 239 -----------------IEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQG 283 (296)
T ss_dssp -----------------HHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHT
T ss_pred -----------------hhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhC
Confidence 000112246779999999999999999999999999999887654
No 147
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=1.2e-37 Score=339.66 Aligned_cols=263 Identities=19% Similarity=0.230 Sum_probs=210.5
Q ss_pred hcCCCCCccccccCceEEEEEEe-CCCeEEEEEEEeccchhhHHHHHHHHHHHHhccCCceeEEEeee-ecCCeeEEEEE
Q 048430 679 TNGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQEDRALKSFDTECEVMRRIRHRNLIKIVSSC-SNPGFKALIMQ 756 (973)
Q Consensus 679 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~-~~~~~~~lv~e 756 (973)
.++|...+.||+|+||.||+|+. .+++.||||++...... +.+.+|+.+++.++|++++..+.++ ...+..++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 85 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH--PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME 85 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSSC--CHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcch--hHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEE
Confidence 46788899999999999999995 67999999998655332 4688999999999988766655554 66788899999
Q ss_pred ecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEe---CCCCcEEEeecccccccCCC
Q 048430 757 YMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLL---DDDMVAHLGDFGIAKLLDGV 833 (973)
Q Consensus 757 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill---~~~~~~kl~Dfgla~~~~~~ 833 (973)
|+ +++|.+++......+++.++..++.|++.||+||| +.+|+||||||+||++ +.++.+||+|||++......
T Consensus 86 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~ 161 (296)
T 3uzp_A 86 LL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDA 161 (296)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred ec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccccc
Confidence 99 89999999866668999999999999999999999 7899999999999999 48889999999999876543
Q ss_pred CCc------ccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCc--ccHHHHHHhhCCcchhh
Q 048430 834 DPV------TQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGE--MSLKQWVAESLPGAVTE 905 (973)
Q Consensus 834 ~~~------~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~--~~~~~~~~~~~~~~~~~ 905 (973)
... ......||+.|+|||...+..++.++|||||||++|||++|+.||....... ..+...........
T Consensus 162 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~--- 238 (296)
T 3uzp_A 162 RTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTP--- 238 (296)
T ss_dssp TTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSC---
T ss_pred ccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCc---
Confidence 321 1234579999999999999899999999999999999999999997643221 11111111100000
Q ss_pred hcccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHHHHH
Q 048430 906 VVDANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIKKILT 966 (973)
Q Consensus 906 ~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~~~~~ 966 (973)
.......+++++.+++.+||+.||++||+++|+++.|+++.+...
T Consensus 239 ----------------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~ 283 (296)
T 3uzp_A 239 ----------------IEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQG 283 (296)
T ss_dssp ----------------HHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred ----------------hHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcC
Confidence 000112346779999999999999999999999999999877643
No 148
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=1.5e-38 Score=353.69 Aligned_cols=245 Identities=22% Similarity=0.251 Sum_probs=205.1
Q ss_pred cCCCCCccccccCceEEEEEEeC-CCeEEEEEEEeccc---hhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEEE
Q 048430 680 NGFGESNLLGSGSFDNVYKATLA-NGVSVAVKVFNLQE---DRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALIM 755 (973)
Q Consensus 680 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 755 (973)
++|...+.||+|+||.||+|+.. +|+.||||+++... ....+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 120 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence 57888899999999999999964 78999999997543 234567889999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCCCC
Q 048430 756 QYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGVDP 835 (973)
Q Consensus 756 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 835 (973)
||+++|+|.+++.... .+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 121 e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~-- 194 (350)
T 1rdq_E 121 EYVAGGEMFSHLRRIG-RFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-- 194 (350)
T ss_dssp ECCTTCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC--
T ss_pred cCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccccCccceEEECCCCCEEEcccccceeccCC--
Confidence 9999999999998765 6999999999999999999999 799999999999999999999999999999876432
Q ss_pred cccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhcccccCCCC
Q 048430 836 VTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLLSRE 915 (973)
Q Consensus 836 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 915 (973)
.....||+.|+|||.+.+..++.++|||||||++|||++|+.||..... ....... ......
T Consensus 195 --~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~-----~~~~~~i--------~~~~~~--- 256 (350)
T 1rdq_E 195 --TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP-----IQIYEKI--------VSGKVR--- 256 (350)
T ss_dssp --BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHHH--------HHCCCC---
T ss_pred --cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCH-----HHHHHHH--------HcCCCC---
Confidence 2345799999999999888999999999999999999999999865321 1111111 000000
Q ss_pred chhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCC-----HHHHHHH
Q 048430 916 DEEDADDFATKKTCISYIMSLALKCSAEIPEERIN-----VKDALAD 957 (973)
Q Consensus 916 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt-----~~evl~~ 957 (973)
.+..++.++.+++.+||+.||++||+ ++|+++|
T Consensus 257 ---------~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h 294 (350)
T 1rdq_E 257 ---------FPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 294 (350)
T ss_dssp ---------CCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTS
T ss_pred ---------CCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhC
Confidence 01124566889999999999999998 8888876
No 149
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.9e-39 Score=360.27 Aligned_cols=260 Identities=23% Similarity=0.399 Sum_probs=199.5
Q ss_pred CCCCccccccCceEEEEEEeC--CC--eEEEEEEEeccc-hhhHHHHHHHHHHHHhccCCceeEEEeeeec-CCeeEEEE
Q 048430 682 FGESNLLGSGSFDNVYKATLA--NG--VSVAVKVFNLQE-DRALKSFDTECEVMRRIRHRNLIKIVSSCSN-PGFKALIM 755 (973)
Q Consensus 682 ~~~~~~lg~G~~g~Vy~~~~~--~~--~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~~~lv~ 755 (973)
|...+.||+|+||.||+|+.. ++ ..||||.++... ....+.+.+|+.++++++||||+++++++.+ .+..++||
T Consensus 91 ~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~ 170 (373)
T 3c1x_A 91 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL 170 (373)
T ss_dssp EEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEE
T ss_pred eecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEE
Confidence 455689999999999999853 32 468999886443 3456789999999999999999999998754 56789999
Q ss_pred EecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCCCC
Q 048430 756 QYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGVDP 835 (973)
Q Consensus 756 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 835 (973)
||+++|+|.+++......+++.++..++.||++||+||| +.+|+||||||+||+++.++.+||+|||+++.......
T Consensus 171 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~ 247 (373)
T 3c1x_A 171 PYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF 247 (373)
T ss_dssp ECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC-----------
T ss_pred ECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHH---HCCEecCccchheEEECCCCCEEEeecccccccccccc
Confidence 999999999999887767999999999999999999999 78999999999999999999999999999986543221
Q ss_pred c---ccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCccccCcccHHHHHHhhCCcchhhhccccc
Q 048430 836 V---TQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFT-RRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANL 911 (973)
Q Consensus 836 ~---~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 911 (973)
. ......+|+.|+|||.+.+..++.++|||||||++|||++ |..||...... .....+.....
T Consensus 248 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~--~~~~~~~~~~~----------- 314 (373)
T 3c1x_A 248 DSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF--DITVYLLQGRR----------- 314 (373)
T ss_dssp ----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSS--CHHHHHHTTCC-----------
T ss_pred ccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHH--HHHHHHHcCCC-----------
Confidence 1 1233457889999999988899999999999999999999 66676543222 22222111000
Q ss_pred CCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHHHHHhh
Q 048430 912 LSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIKKILTQA 968 (973)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~~~~~~~ 968 (973)
...+..++..+.+++.+||+.||++||+++|++++|+++...+..+
T Consensus 315 -----------~~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~~~ 360 (373)
T 3c1x_A 315 -----------LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGE 360 (373)
T ss_dssp -----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCCSC
T ss_pred -----------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcccc
Confidence 0011234567899999999999999999999999999998765543
No 150
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=3.7e-38 Score=345.78 Aligned_cols=270 Identities=23% Similarity=0.296 Sum_probs=202.9
Q ss_pred HhcCCCCCccccccCceEEEEEEe-CCCeEEEEEEEeccch-----hhHHHHHHHHHHHHhcc---CCceeEEEeeeecC
Q 048430 678 ATNGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQED-----RALKSFDTECEVMRRIR---HRNLIKIVSSCSNP 748 (973)
Q Consensus 678 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-----~~~~~~~~e~~~l~~l~---h~niv~l~~~~~~~ 748 (973)
..++|...+.||+|+||.||+|+. .+++.||||+++.... .....+.+|+.++++++ ||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 467899999999999999999995 5789999999864321 12346777888877765 99999999999765
Q ss_pred C-----eeEEEEEecCCCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEe
Q 048430 749 G-----FKALIMQYMPQGSLEKWLYSHN-YSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLG 822 (973)
Q Consensus 749 ~-----~~~lv~e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~ 822 (973)
. ..++||||+. ++|.+++.... ..+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~Nil~~~~~~~kl~ 162 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLH---ANCIVHRDLKPENILVTSGGTVKLA 162 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCTTTEEECTTSCEEEC
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCEEEe
Confidence 4 5799999997 59999998765 34999999999999999999999 7899999999999999999999999
Q ss_pred ecccccccCCCCCcccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCc-
Q 048430 823 DFGIAKLLDGVDPVTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPG- 901 (973)
Q Consensus 823 Dfgla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~- 901 (973)
|||+++..... .......||+.|+|||.+.+..++.++|||||||++|||++|+.||......+ .+..........
T Consensus 163 Dfg~a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~i~~~~~~~~ 239 (308)
T 3g33_A 163 DFGLARIYSYQ--MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD-QLGKIFDLIGLPP 239 (308)
T ss_dssp SCSCTTTSTTC--CCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHH-HHHHHHHHHCCCC
T ss_pred eCccccccCCC--cccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCC
Confidence 99999866432 22344578999999999988889999999999999999999999996532211 122222211110
Q ss_pred --chhhh---cccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 902 --AVTEV---VDANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 902 --~~~~~---~d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
.+... ....+... ...........+++++.+++.+||+.||++|||++|+++|
T Consensus 240 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 297 (308)
T 3g33_A 240 EDDWPRDVSLPRGAFPPR---GPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH 297 (308)
T ss_dssp TTTSCSSCSSCGGGSCCC---CCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred hhhccchhhccccccCCC---CCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcC
Confidence 00000 00000000 0000111112356778999999999999999999999986
No 151
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=2.5e-38 Score=341.76 Aligned_cols=250 Identities=22% Similarity=0.390 Sum_probs=186.6
Q ss_pred hcCCCCCccccccCceEEEEEEe-CCCeEEEEEEEeccch---hhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEE
Q 048430 679 TNGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQED---RALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALI 754 (973)
Q Consensus 679 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 754 (973)
.++|...+.||+|+||.||+|+. .+++.||||++..... ...+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV 89 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence 45788899999999999999986 5799999999975432 2346789999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCCC
Q 048430 755 MQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGVD 834 (973)
Q Consensus 755 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 834 (973)
|||+++++|.+++......+++.++..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||.+.......
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~ 166 (278)
T 3cok_A 90 LEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLH---SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPH 166 (278)
T ss_dssp EECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSSCCGGGEEECTTCCEEECCCTTCEECC---
T ss_pred EecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEEEeecceeeccCCC
Confidence 9999999999999887667999999999999999999999 7899999999999999999999999999998764322
Q ss_pred CcccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhcccccCCC
Q 048430 835 PVTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLLSR 914 (973)
Q Consensus 835 ~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 914 (973)
. ......+++.|+|||...+..++.++||||||+++|||++|+.||......+. .. .......
T Consensus 167 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-----~~--------~~~~~~~--- 229 (278)
T 3cok_A 167 E-KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNT-----LN--------KVVLADY--- 229 (278)
T ss_dssp --------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC------------------CCSSCC---
T ss_pred C-cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHH-----HH--------HHhhccc---
Confidence 1 22335689999999999888899999999999999999999999865322110 00 0000000
Q ss_pred CchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 915 EDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
..+..++.++.+++.+||+.||++||+++|+++|
T Consensus 230 ---------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 263 (278)
T 3cok_A 230 ---------EMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLDH 263 (278)
T ss_dssp ---------CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred ---------CCccccCHHHHHHHHHHcccCHhhCCCHHHHhcC
Confidence 0011235668899999999999999999999975
No 152
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=6.9e-38 Score=345.59 Aligned_cols=249 Identities=20% Similarity=0.261 Sum_probs=182.6
Q ss_pred CccccccCceEEEEEEeC-CCeEEEEEEEeccchhhHHHHHHHHHHHHhcc-CCceeEEEeeeecCCeeEEEEEecCCCC
Q 048430 685 SNLLGSGSFDNVYKATLA-NGVSVAVKVFNLQEDRALKSFDTECEVMRRIR-HRNLIKIVSSCSNPGFKALIMQYMPQGS 762 (973)
Q Consensus 685 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~~gs 762 (973)
.+.||+|+||.||+|... +++.||||++... ....+.+|+.+++.+. ||||+++++++.+....++||||+++|+
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 92 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGE 92 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCc
Confidence 478999999999999964 6899999998643 3356789999999997 9999999999999999999999999999
Q ss_pred HHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCC---cEEEeecccccccCCCCCcccc
Q 048430 763 LEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDM---VAHLGDFGIAKLLDGVDPVTQT 839 (973)
Q Consensus 763 L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~---~~kl~Dfgla~~~~~~~~~~~~ 839 (973)
|.+++.... .+++.++..++.|++.||+||| +.+|+||||||+||+++.++ .+||+|||+++...... ....
T Consensus 93 L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~ 167 (325)
T 3kn6_A 93 LFERIKKKK-HFSETEASYIMRKLVSAVSHMH---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDN-QPLK 167 (325)
T ss_dssp HHHHHHHCS-CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC-------
T ss_pred HHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCC-Cccc
Confidence 999998865 7999999999999999999999 79999999999999997765 89999999998654322 2234
Q ss_pred cccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCc--ccHHHHHHhhCCcchhhhcccccCCCCch
Q 048430 840 MTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGE--MSLKQWVAESLPGAVTEVVDANLLSREDE 917 (973)
Q Consensus 840 ~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 917 (973)
...+|+.|+|||.+.+..++.++|||||||++|||++|+.||....... ............+. .. .
T Consensus 168 ~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~--------~~----~ 235 (325)
T 3kn6_A 168 TPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGD--------FS----F 235 (325)
T ss_dssp ----------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTC--------CC----C
T ss_pred ccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCC--------CC----C
Confidence 4568999999999999999999999999999999999999997533211 11111111111110 00 0
Q ss_pred hhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 918 EDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 918 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
.......+++++.+++.+||+.||++||+++|+++|
T Consensus 236 ----~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 271 (325)
T 3kn6_A 236 ----EGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYN 271 (325)
T ss_dssp ----CSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTC
T ss_pred ----CcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhcC
Confidence 001123456779999999999999999999998855
No 153
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=6.2e-38 Score=348.10 Aligned_cols=250 Identities=22% Similarity=0.334 Sum_probs=198.4
Q ss_pred hcCCCCCccccccCceEEEEEEeC-CCeEEEEEEEeccc-hhhHHHHHHHHHHHHhccCCceeEEEeeeecCC-------
Q 048430 679 TNGFGESNLLGSGSFDNVYKATLA-NGVSVAVKVFNLQE-DRALKSFDTECEVMRRIRHRNLIKIVSSCSNPG------- 749 (973)
Q Consensus 679 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------- 749 (973)
.++|...+.||+|+||.||+|+.. +++.||||+++... ....+.+.+|++++++++||||+++++++.+..
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 84 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE 84 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence 356888999999999999999975 79999999997543 335678999999999999999999999885433
Q ss_pred --------------------------------------------------eeEEEEEecCCCCHHHHhhhCC--CCCCHH
Q 048430 750 --------------------------------------------------FKALIMQYMPQGSLEKWLYSHN--YSLTIR 777 (973)
Q Consensus 750 --------------------------------------------------~~~lv~e~~~~gsL~~~l~~~~--~~l~~~ 777 (973)
..++||||+++|+|.+++.... ...++.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~ 164 (332)
T 3qd2_B 85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHG 164 (332)
T ss_dssp HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHH
T ss_pred hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhH
Confidence 3799999999999999998754 345677
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCCCC-----------ccccccccccc
Q 048430 778 QRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGVDP-----------VTQTMTLATIG 846 (973)
Q Consensus 778 ~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~-----------~~~~~~~~~~~ 846 (973)
.+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++....... .......||+.
T Consensus 165 ~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 241 (332)
T 3qd2_B 165 VCLHIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKL 241 (332)
T ss_dssp HHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGG
T ss_pred HHHHHHHHHHHHHHHHH---hCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcC
Confidence 78999999999999999 79999999999999999999999999999987654321 12234569999
Q ss_pred ccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhcccccCCCCchhhhhhHHhH
Q 048430 847 YMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLLSREDEEDADDFATK 926 (973)
Q Consensus 847 y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~ 926 (973)
|+|||.+.+..++.++|||||||++|||++|..|+... .......... .. ....
T Consensus 242 y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~-------~~~~~~~~~~------------~~-------~~~~ 295 (332)
T 3qd2_B 242 YMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMER-------VRIITDVRNL------------KF-------PLLF 295 (332)
T ss_dssp GSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHH-------HHHHHHHHTT------------CC-------CHHH
T ss_pred ccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHH-------HHHHHHhhcc------------CC-------Cccc
Confidence 99999998889999999999999999999987663210 0111100000 00 0112
Q ss_pred HHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 927 KTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 927 ~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
...++++.+++.+||+.||++||+++|+++|
T Consensus 296 ~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~ 326 (332)
T 3qd2_B 296 TQKYPQEHMMVQDMLSPSPTERPEATDIIEN 326 (332)
T ss_dssp HHHCHHHHHHHHHHHCSSGGGSCCHHHHHHS
T ss_pred ccCChhHHHHHHHHccCCCCcCCCHHHHhhc
Confidence 2345667899999999999999999999975
No 154
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=9e-38 Score=343.10 Aligned_cols=263 Identities=23% Similarity=0.350 Sum_probs=201.8
Q ss_pred cCCCCCccccccCceEEEEEEe-CCCeEEEEEEEecc---chhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEEE
Q 048430 680 NGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQ---EDRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALIM 755 (973)
Q Consensus 680 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 755 (973)
++|...+.||+|+||.||+|.. .+++.||||+++.. .....+.+.+|+.++++++||||+++++++...+..++||
T Consensus 32 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 111 (310)
T 2wqm_A 32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 111 (310)
T ss_dssp GGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEE
Confidence 4688889999999999999985 57999999998753 2345678899999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhh---CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCC
Q 048430 756 QYMPQGSLEKWLYS---HNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDG 832 (973)
Q Consensus 756 e~~~~gsL~~~l~~---~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~ 832 (973)
||+++++|.+++.. ....+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++.....
T Consensus 112 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~ 188 (310)
T 2wqm_A 112 ELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 188 (310)
T ss_dssp ECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCC--------
T ss_pred ecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCcHHHEEEcCCCCEEEEeccceeeecC
Confidence 99999999999875 3356899999999999999999999 78999999999999999999999999999886543
Q ss_pred CCCcccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhcccccC
Q 048430 833 VDPVTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLL 912 (973)
Q Consensus 833 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 912 (973)
.. .......+++.|+|||......++.++||||||+++|||++|+.||...... ............... .
T Consensus 189 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~---~~~~~~~~~~~~~~~-----~- 258 (310)
T 2wqm_A 189 KT-TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN---LYSLCKKIEQCDYPP-----L- 258 (310)
T ss_dssp -----------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CC---HHHHHHHHHTTCSCC-----C-
T ss_pred CC-ccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchh---HHHHHHHhhcccCCC-----C-
Confidence 22 2223346899999999998889999999999999999999999998653221 112211111100000 0
Q ss_pred CCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHHHHHh
Q 048430 913 SREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIKKILTQ 967 (973)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~~~~~~ 967 (973)
....++.++.+++.+||+.||++||++.|+++.|+++....+.
T Consensus 259 ------------~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~~ 301 (310)
T 2wqm_A 259 ------------PSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTAS 301 (310)
T ss_dssp ------------CTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC-
T ss_pred ------------cccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhhh
Confidence 0012456789999999999999999999999999999877543
No 155
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=6.7e-38 Score=346.19 Aligned_cols=249 Identities=22% Similarity=0.278 Sum_probs=195.3
Q ss_pred hcCCCCCccccccCceEEEEEEe----CCCeEEEEEEEeccc----hhhHHHHHHHHHHHHhccCCceeEEEeeeecCCe
Q 048430 679 TNGFGESNLLGSGSFDNVYKATL----ANGVSVAVKVFNLQE----DRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGF 750 (973)
Q Consensus 679 ~~~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 750 (973)
.++|...+.||+|+||.||+|+. .+++.||+|+++... ......+.+|+.++++++||||+++++++...+.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 35788899999999999999986 478999999987542 2334567899999999999999999999999999
Q ss_pred eEEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeeccccccc
Q 048430 751 KALIMQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLL 830 (973)
Q Consensus 751 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~ 830 (973)
.++||||+++|+|.+++.... .+++..+..++.||+.||.||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~lH---~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~ 171 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLEREG-IFMEDTACFYLAEISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKES 171 (327)
T ss_dssp EEEEEECCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCTTTEEECTTSCEEECCCSCC---
T ss_pred EEEEEeCCCCCcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHH---hCCEEcccCCHHHeEECCCCcEEEEeCCccccc
Confidence 999999999999999998754 6899999999999999999999 789999999999999999999999999998754
Q ss_pred CCCCCcccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhcccc
Q 048430 831 DGVDPVTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDAN 910 (973)
Q Consensus 831 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 910 (973)
.... .......||+.|+|||.+....++.++|||||||++|||++|+.||...... ..+.. +....
T Consensus 172 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-----~~~~~--------i~~~~ 237 (327)
T 3a62_A 172 IHDG-TVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRK-----KTIDK--------ILKCK 237 (327)
T ss_dssp --------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-----HHHHH--------HHHTC
T ss_pred ccCC-ccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHH-----HHHHH--------HHhCC
Confidence 3221 2223456999999999998888999999999999999999999999653211 11111 00000
Q ss_pred cCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCC-----CHHHHHHH
Q 048430 911 LLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERI-----NVKDALAD 957 (973)
Q Consensus 911 l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rp-----t~~evl~~ 957 (973)
.. .+..++.++.+++.+||+.||++|| ++.|+++|
T Consensus 238 ~~------------~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~h 277 (327)
T 3a62_A 238 LN------------LPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAH 277 (327)
T ss_dssp CC------------CCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHS
T ss_pred CC------------CCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcC
Confidence 00 0112356688999999999999999 78888876
No 156
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=7.6e-38 Score=337.74 Aligned_cols=251 Identities=23% Similarity=0.269 Sum_probs=206.0
Q ss_pred hcCCCCCccccccCceEEEEEEeC-CCeEEEEEEEeccchhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEEEEe
Q 048430 679 TNGFGESNLLGSGSFDNVYKATLA-NGVSVAVKVFNLQEDRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALIMQY 757 (973)
Q Consensus 679 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 757 (973)
.++|...+.||+|+||.||+|... ++..||+|++........+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMEL 87 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEec
Confidence 456888999999999999999864 5789999999776555567899999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEe---CCCCcEEEeecccccccCCCC
Q 048430 758 MPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLL---DDDMVAHLGDFGIAKLLDGVD 834 (973)
Q Consensus 758 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill---~~~~~~kl~Dfgla~~~~~~~ 834 (973)
+++++|.+++.... .+++.++..++.|++.||+||| +.+|+||||||+||++ +.++.+||+|||++.......
T Consensus 88 ~~~~~L~~~~~~~~-~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~ 163 (277)
T 3f3z_A 88 CTGGELFERVVHKR-VFRESDAARIMKDVLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK 163 (277)
T ss_dssp CCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTS
T ss_pred cCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCcc
Confidence 99999999988765 6899999999999999999999 7899999999999999 788999999999998764322
Q ss_pred CcccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhcccccCCC
Q 048430 835 PVTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLLSR 914 (973)
Q Consensus 835 ~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 914 (973)
......+|+.|+|||...+ .++.++||||||+++|||++|+.||......+ ....+.... . .
T Consensus 164 --~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~--~~~~~~~~~-----------~-~- 225 (277)
T 3f3z_A 164 --MMRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTDSE--VMLKIREGT-----------F-T- 225 (277)
T ss_dssp --CBCCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHHHCC-----------C-C-
T ss_pred --chhccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCCHHH--HHHHHHhCC-----------C-C-
Confidence 2334569999999998765 48999999999999999999999986532211 111111100 0 0
Q ss_pred CchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 915 EDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
. . ......+++++.+++.+|++.||++||++.|+++|
T Consensus 226 ~-~-----~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 262 (277)
T 3f3z_A 226 F-P-----EKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEH 262 (277)
T ss_dssp C-C-----HHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred C-C-----chhhhcCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0 0 00011345678999999999999999999999987
No 157
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=6e-38 Score=344.03 Aligned_cols=263 Identities=22% Similarity=0.258 Sum_probs=201.5
Q ss_pred HhcCCCCCccccccCceEEEEEEeC-CCeEEEEEEEeccc---hhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEE
Q 048430 678 ATNGFGESNLLGSGSFDNVYKATLA-NGVSVAVKVFNLQE---DRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKAL 753 (973)
Q Consensus 678 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 753 (973)
..++|...+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|+.++++++||||+++++++...+..++
T Consensus 32 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~l 111 (309)
T 2h34_A 32 QFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYV 111 (309)
T ss_dssp --CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEE
T ss_pred EeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEE
Confidence 4578999999999999999999964 78999999986542 2335778999999999999999999999999999999
Q ss_pred EEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCC
Q 048430 754 IMQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGV 833 (973)
Q Consensus 754 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 833 (973)
||||+++++|.+++.... .+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++......
T Consensus 112 v~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 187 (309)
T 2h34_A 112 DMRLINGVDLAAMLRRQG-PLAPPRAVAIVRQIGSALDAAH---AAGATHRDVKPENILVSADDFAYLVDFGIASATTDE 187 (309)
T ss_dssp EEECCCCEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSCCC-------
T ss_pred EEEecCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCcCCcCCCChHHEEEcCCCCEEEecCccCcccccc
Confidence 999999999999998764 6999999999999999999999 789999999999999999999999999999876543
Q ss_pred CCcccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhcccccCC
Q 048430 834 DPVTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLLS 913 (973)
Q Consensus 834 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 913 (973)
.........+++.|+|||...+..++.++||||||+++|||++|+.||...... .....+....+.
T Consensus 188 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~~~~~~~~------------ 253 (309)
T 2h34_A 188 KLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS--VMGAHINQAIPR------------ 253 (309)
T ss_dssp ---------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH--HHHHHHHSCCCC------------
T ss_pred ccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH--HHHHHhccCCCC------------
Confidence 333334557899999999999889999999999999999999999998653211 111111110000
Q ss_pred CCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCC-CHHHHHHHHHHHHHHHH
Q 048430 914 REDEEDADDFATKKTCISYIMSLALKCSAEIPEERI-NVKDALADLKKIKKILT 966 (973)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rp-t~~evl~~L~~~~~~~~ 966 (973)
....+..++.++.+++.+||+.||++|| +++++++.|+++.+...
T Consensus 254 --------~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~~ 299 (309)
T 2h34_A 254 --------PSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATAD 299 (309)
T ss_dssp --------GGGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC---
T ss_pred --------ccccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhhc
Confidence 0001123456688999999999999999 99999999988765543
No 158
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=5.9e-38 Score=348.80 Aligned_cols=250 Identities=23% Similarity=0.240 Sum_probs=204.7
Q ss_pred HhcCCCCCccccccCceEEEEEEeC-CCeEEEEEEEeccc---hhhHHHHHHHHHHHHhc-cCCceeEEEeeeecCCeeE
Q 048430 678 ATNGFGESNLLGSGSFDNVYKATLA-NGVSVAVKVFNLQE---DRALKSFDTECEVMRRI-RHRNLIKIVSSCSNPGFKA 752 (973)
Q Consensus 678 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~ 752 (973)
..++|...+.||+|+||.||+|+.. +++.||||+++... ....+.+..|..++..+ +||+|+++++++.+.+..|
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~ 97 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 97 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence 4578999999999999999999965 58899999997542 23456788999999887 7999999999999999999
Q ss_pred EEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCC
Q 048430 753 LIMQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDG 832 (973)
Q Consensus 753 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~ 832 (973)
+||||+++|+|.+++...+ .+++..++.++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 98 lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 173 (353)
T 2i0e_A 98 FVMEYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIW 173 (353)
T ss_dssp EEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCEEeccCCHHHEEEcCCCcEEEEeCCccccccc
Confidence 9999999999999998754 6999999999999999999999 78999999999999999999999999999986432
Q ss_pred CCCcccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhcccccC
Q 048430 833 VDPVTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLL 912 (973)
Q Consensus 833 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 912 (973)
. .......+||+.|+|||.+.+..++.++|||||||++|||++|+.||..... ..+.+.+. .....
T Consensus 174 ~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~--~~~~~~i~-----------~~~~~ 239 (353)
T 2i0e_A 174 D-GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE--DELFQSIM-----------EHNVA 239 (353)
T ss_dssp T-TCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHH-----------HCCCC
T ss_pred C-CcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCH--HHHHHHHH-----------hCCCC
Confidence 1 2223445799999999999988999999999999999999999999965221 11111111 11000
Q ss_pred CCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCC-----HHHHHHH
Q 048430 913 SREDEEDADDFATKKTCISYIMSLALKCSAEIPEERIN-----VKDALAD 957 (973)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt-----~~evl~~ 957 (973)
.+..++.++.+++.+||+.||++||+ ++|+++|
T Consensus 240 ------------~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h 277 (353)
T 2i0e_A 240 ------------YPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 277 (353)
T ss_dssp ------------CCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTS
T ss_pred ------------CCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 01124567889999999999999995 5777765
No 159
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=1.3e-37 Score=337.30 Aligned_cols=252 Identities=21% Similarity=0.328 Sum_probs=205.7
Q ss_pred hcCCCCCccccccCceEEEEEEeC-CCeEEEEEEEeccc--hhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEEE
Q 048430 679 TNGFGESNLLGSGSFDNVYKATLA-NGVSVAVKVFNLQE--DRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALIM 755 (973)
Q Consensus 679 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 755 (973)
.++|...+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 84 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 84 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence 467888999999999999999864 68999999987553 334577889999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCc---EEEeecccccccCC
Q 048430 756 QYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMV---AHLGDFGIAKLLDG 832 (973)
Q Consensus 756 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~---~kl~Dfgla~~~~~ 832 (973)
||+++++|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++. +||+|||.+.....
T Consensus 85 e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~ 160 (284)
T 3kk8_A 85 DLVTGGELFEDIVARE-FYSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 160 (284)
T ss_dssp CCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCS
T ss_pred ecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEccc
Confidence 9999999999887764 6999999999999999999999 789999999999999987655 99999999987643
Q ss_pred CCCcccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhcccccC
Q 048430 833 VDPVTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLL 912 (973)
Q Consensus 833 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 912 (973)
. .......||+.|+|||.+.+..++.++||||+|+++|||++|+.||...... .....+.......
T Consensus 161 ~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~--~~~~~~~~~~~~~---------- 226 (284)
T 3kk8_A 161 S--EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH--RLYAQIKAGAYDY---------- 226 (284)
T ss_dssp S--CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHTCCCC----------
T ss_pred C--ccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchh--HHHHHHHhccccC----------
Confidence 2 2233457999999999999989999999999999999999999998653211 1111111100000
Q ss_pred CCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 913 SREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
.. .....+++++.+++.+||+.||++||+++|+++|
T Consensus 227 --~~-------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (284)
T 3kk8_A 227 --PS-------PEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 262 (284)
T ss_dssp --CT-------TTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred --Cc-------hhhcccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 00 0001235668899999999999999999999987
No 160
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=2.2e-38 Score=350.13 Aligned_cols=260 Identities=22% Similarity=0.350 Sum_probs=205.5
Q ss_pred cCCCCCccccccCceEEEEEEeC-CCeE----EEEEEEeccc-hhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEE
Q 048430 680 NGFGESNLLGSGSFDNVYKATLA-NGVS----VAVKVFNLQE-DRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKAL 753 (973)
Q Consensus 680 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~----vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 753 (973)
++|...+.||+|+||.||+|+.. +++. ||+|.+.... ......+.+|+.++++++||||+++++++. .+..++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~ 91 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQL 91 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEE
Confidence 46778899999999999999853 4443 7788775332 223456788999999999999999999986 456889
Q ss_pred EEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCC
Q 048430 754 IMQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGV 833 (973)
Q Consensus 754 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 833 (973)
||||+++|+|.+++......+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 92 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 168 (325)
T 3kex_A 92 VTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPD 168 (325)
T ss_dssp EEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHH---HTTCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCC
T ss_pred EEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHH---hCCCCCCccchheEEECCCCeEEECCCCcccccCcc
Confidence 99999999999999876667999999999999999999999 789999999999999999999999999999876543
Q ss_pred CCc-ccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCccccCcccHHHHHHhhCCcchhhhccccc
Q 048430 834 DPV-TQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFT-RRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANL 911 (973)
Q Consensus 834 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 911 (973)
... ......+|..|+|||.+....++.++|||||||++|||++ |+.||...... .....+......
T Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~~~~~~~~~~~~---------- 236 (325)
T 3kex_A 169 DKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLA--EVPDLLEKGERL---------- 236 (325)
T ss_dssp TTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTT--HHHHHHHTTCBC----------
T ss_pred cccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHH--HHHHHHHcCCCC----------
Confidence 322 2344567889999999988899999999999999999999 99999753222 122222111000
Q ss_pred CCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHHHHHh
Q 048430 912 LSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIKKILTQ 967 (973)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~~~~~~ 967 (973)
..+..++.++.+++.+||+.||++||+++|++++|+++.+...+
T Consensus 237 ------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~~~~ 280 (325)
T 3kex_A 237 ------------AQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARDPPR 280 (325)
T ss_dssp ------------CCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTSHHH
T ss_pred ------------CCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcchh
Confidence 00111344577899999999999999999999999998765543
No 161
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.8e-38 Score=357.80 Aligned_cols=278 Identities=22% Similarity=0.293 Sum_probs=212.0
Q ss_pred cCCCCCccccccCceEEEEEEeC-CCeEEEEEEEeccc-hhhHHHHHHHHHHHHhccCCceeEEEeeeecCC--eeEEEE
Q 048430 680 NGFGESNLLGSGSFDNVYKATLA-NGVSVAVKVFNLQE-DRALKSFDTECEVMRRIRHRNLIKIVSSCSNPG--FKALIM 755 (973)
Q Consensus 680 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~--~~~lv~ 755 (973)
++|...++||+|+||.||+|+.. +++.||||+++... ....+.+.+|++++++++||||+++++++...+ ..++||
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~ 88 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEE
Confidence 46888899999999999999965 58999999997543 233567889999999999999999999987654 779999
Q ss_pred EecCCCCHHHHhhhCC--CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEe----CCCCcEEEeecccccc
Q 048430 756 QYMPQGSLEKWLYSHN--YSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLL----DDDMVAHLGDFGIAKL 829 (973)
Q Consensus 756 e~~~~gsL~~~l~~~~--~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill----~~~~~~kl~Dfgla~~ 829 (973)
||+++|+|.+++.... ..+++..++.++.|++.||+||| +.+|+||||||+||++ +.++.+||+|||+++.
T Consensus 89 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~ 165 (396)
T 4eut_A 89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE 165 (396)
T ss_dssp CCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEE
T ss_pred ecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHH---HCCEEECCcCHHHEEEeecCCCceeEEEecCCCceE
Confidence 9999999999998643 23899999999999999999999 7899999999999999 7788899999999987
Q ss_pred cCCCCCcccccccccccccCccCCCC--------CCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHH---Hhh
Q 048430 830 LDGVDPVTQTMTLATIGYMAPEYGSE--------GIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWV---AES 898 (973)
Q Consensus 830 ~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~---~~~ 898 (973)
.... .......||+.|+|||.+.. ..++.++|||||||++|||++|+.||.............. ...
T Consensus 166 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~ 243 (396)
T 4eut_A 166 LEDD--EQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGK 243 (396)
T ss_dssp CCCG--GGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSC
T ss_pred ccCC--CccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCC
Confidence 6432 22334569999999997654 4678899999999999999999999975433332222221 111
Q ss_pred CCcchhhhcccccCCCCc--hhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHH
Q 048430 899 LPGAVTEVVDANLLSRED--EEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIKK 963 (973)
Q Consensus 899 ~~~~~~~~~d~~l~~~~~--~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~~ 963 (973)
.+..+..... ....... ............++..+.+++.+||+.||++||+++|+++.++.+..
T Consensus 244 p~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~ 309 (396)
T 4eut_A 244 PSGAISGVQK-AENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILH 309 (396)
T ss_dssp CTTCCEEEEC-STTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHT
T ss_pred Ccccchhhee-ccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhh
Confidence 1111111100 0000000 00000111224567889999999999999999999999999887754
No 162
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.5e-38 Score=352.42 Aligned_cols=243 Identities=26% Similarity=0.354 Sum_probs=203.8
Q ss_pred HhcCCCCCccccccCceEEEEEEe-CCCeEEEEEEEeccch--------hhHHHHHHHHHHHHhccCCceeEEEeeeecC
Q 048430 678 ATNGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQED--------RALKSFDTECEVMRRIRHRNLIKIVSSCSNP 748 (973)
Q Consensus 678 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 748 (973)
..++|...+.||+|+||.||+|+. .+++.||||+++.... ...+.+.+|+.++++++||||+++++++.+.
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 456799999999999999999984 5789999999875421 1234677899999999999999999999999
Q ss_pred CeeEEEEEecCCC-CHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccc
Q 048430 749 GFKALIMQYMPQG-SLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIA 827 (973)
Q Consensus 749 ~~~~lv~e~~~~g-sL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla 827 (973)
+..++||||+.+| +|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++
T Consensus 102 ~~~~lv~e~~~~g~~l~~~~~~~~-~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a 177 (335)
T 3dls_A 102 GFFQLVMEKHGSGLDLFAFIDRHP-RLDEPLASYIFRQLVSAVGYLR---LKDIIHRDIKDENIVIAEDFTIKLIDFGSA 177 (335)
T ss_dssp SEEEEEEECCTTSCBHHHHHHTCC-CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTC
T ss_pred CEEEEEEEeCCCCccHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeEEeccCHHHEEEcCCCcEEEeecccc
Confidence 9999999999777 9999998765 6999999999999999999999 789999999999999999999999999999
Q ss_pred cccCCCCCcccccccccccccCccCCCCCCC-CcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhh
Q 048430 828 KLLDGVDPVTQTMTLATIGYMAPEYGSEGIV-SISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEV 906 (973)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 906 (973)
+...... ......||+.|+|||.+.+..+ +.++|||||||++|||++|+.||......
T Consensus 178 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~------------------- 236 (335)
T 3dls_A 178 AYLERGK--LFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET------------------- 236 (335)
T ss_dssp EECCTTC--CBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG-------------------
T ss_pred eECCCCC--ceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH-------------------
Confidence 8765322 2334569999999998887776 88999999999999999999998642110
Q ss_pred cccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 907 VDANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 907 ~d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
...... .+..+++++.+++.+||+.||++||+++|+++|
T Consensus 237 ~~~~~~------------~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 237 VEAAIH------------PPYLVSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp TTTCCC------------CSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred HhhccC------------CCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000000 011135668899999999999999999999987
No 163
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=6e-38 Score=354.76 Aligned_cols=251 Identities=22% Similarity=0.344 Sum_probs=198.2
Q ss_pred cCCCCCccccccCceEEEEEEeCCCeEEEEEEEeccc--hhhHHHHHHHHHHHHhcc--CCceeEEEeeeecCCeeEEEE
Q 048430 680 NGFGESNLLGSGSFDNVYKATLANGVSVAVKVFNLQE--DRALKSFDTECEVMRRIR--HRNLIKIVSSCSNPGFKALIM 755 (973)
Q Consensus 680 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~--h~niv~l~~~~~~~~~~~lv~ 755 (973)
.+|...+.||+|+||.||+|...+++.||||++.... ....+.+.+|+.++++++ ||||+++++++...+..++||
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 135 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 135 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence 4588899999999999999998889999999987543 344678999999999996 599999999999999999999
Q ss_pred EecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCCCC
Q 048430 756 QYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGVDP 835 (973)
Q Consensus 756 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 835 (973)
| +.+++|.+++.... .+++.++..++.||+.||.||| +.+|+||||||+||+++ ++.+||+|||+++.......
T Consensus 136 E-~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH---~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~ 209 (390)
T 2zmd_A 136 E-CGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTT 209 (390)
T ss_dssp E-CCSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCCGGGEEES-SSCEEECCCSSSCCC-----
T ss_pred e-cCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHEEEE-CCeEEEEecCccccccCCCc
Confidence 9 56789999998765 7899999999999999999999 89999999999999995 57999999999987643222
Q ss_pred c-ccccccccccccCccCCCC-----------CCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcch
Q 048430 836 V-TQTMTLATIGYMAPEYGSE-----------GIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAV 903 (973)
Q Consensus 836 ~-~~~~~~~~~~y~aPE~~~~-----------~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 903 (973)
. .....+||+.|+|||.+.. ..++.++|||||||++|||++|+.||....... ..+.
T Consensus 210 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~----~~~~------- 278 (390)
T 2zmd_A 210 SVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI----SKLH------- 278 (390)
T ss_dssp ----CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH----HHHH-------
T ss_pred cccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHH----HHHH-------
Confidence 1 2344579999999997654 468999999999999999999999996532211 1111
Q ss_pred hhhcccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 048430 904 TEVVDANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADL 958 (973)
Q Consensus 904 ~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L 958 (973)
.+.+....... +..++.++.+++.+||+.||++||++.|+++|-
T Consensus 279 -~~~~~~~~~~~----------~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp 322 (390)
T 2zmd_A 279 -AIIDPNHEIEF----------PDIPEKDLQDVLKCCLKRDPKQRISIPELLAHP 322 (390)
T ss_dssp -HHHCTTSCCCC----------CCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred -HHhCccccCCC----------CccchHHHHHHHHHHcccChhhCCCHHHHhhCc
Confidence 11111111000 001234688999999999999999999999873
No 164
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=6.1e-38 Score=345.69 Aligned_cols=261 Identities=23% Similarity=0.249 Sum_probs=207.7
Q ss_pred hcCCCCCccccccCceEEEEEEe-CCCeEEEEEEEeccchhhHHHHHHHHHHHHhccCCceeEEEeeee----cCCeeEE
Q 048430 679 TNGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQEDRALKSFDTECEVMRRIRHRNLIKIVSSCS----NPGFKAL 753 (973)
Q Consensus 679 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~----~~~~~~l 753 (973)
.++|...+.||+|+||.||+|+. .+++.||||++........+.+.+|+.++++++||||+++++++. .....++
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 107 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWL 107 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEE
Confidence 45788899999999999999996 679999999987666666788999999999999999999999986 3457899
Q ss_pred EEEecCCCCHHHHhhh---CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeeccccccc
Q 048430 754 IMQYMPQGSLEKWLYS---HNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLL 830 (973)
Q Consensus 754 v~e~~~~gsL~~~l~~---~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~ 830 (973)
||||+++|+|.+++.. ....+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||.+...
T Consensus 108 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~ 184 (317)
T 2buj_A 108 LLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIH---AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQA 184 (317)
T ss_dssp EEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCSSCEES
T ss_pred EEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEcCCCCEEEEecCcchhc
Confidence 9999999999999986 3457999999999999999999999 789999999999999999999999999998764
Q ss_pred CCCCCc--------ccccccccccccCccCCCCCC---CCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhC
Q 048430 831 DGVDPV--------TQTMTLATIGYMAPEYGSEGI---VSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESL 899 (973)
Q Consensus 831 ~~~~~~--------~~~~~~~~~~y~aPE~~~~~~---~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 899 (973)
...... ......||+.|+|||.+.... ++.++|||||||++|||++|+.||.............+...
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~- 263 (317)
T 2buj_A 185 CIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQ- 263 (317)
T ss_dssp CEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHHCC-
T ss_pred ccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhhcc-
Confidence 321110 012235799999999876544 68999999999999999999999865332222222211110
Q ss_pred CcchhhhcccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHHH
Q 048430 900 PGAVTEVVDANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIKKI 964 (973)
Q Consensus 900 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~~~ 964 (973)
... .....++.++.+++.+||+.||++||+++|++++|+.+...
T Consensus 264 -----------~~~----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~ 307 (317)
T 2buj_A 264 -----------LSI----------PQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPP 307 (317)
T ss_dssp -------------C----------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCC
T ss_pred -----------CCC----------CccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCC
Confidence 000 00112456789999999999999999999999999987543
No 165
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=1.3e-37 Score=358.51 Aligned_cols=247 Identities=24% Similarity=0.378 Sum_probs=205.2
Q ss_pred cCCCCCccccccCceEEEEEEeC-CCeEEEEEEEeccc---hhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEEE
Q 048430 680 NGFGESNLLGSGSFDNVYKATLA-NGVSVAVKVFNLQE---DRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALIM 755 (973)
Q Consensus 680 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 755 (973)
++|...+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|+.+++.++||||+++++++..++..++||
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 95 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVM 95 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 56888899999999999999965 79999999997542 223567899999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCCCC
Q 048430 756 QYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGVDP 835 (973)
Q Consensus 756 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 835 (973)
||+++|+|.+++.... .+++.++..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||++.......
T Consensus 96 E~~~gg~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH---~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~- 170 (476)
T 2y94_A 96 EYVSGGELFDYICKNG-RLDEKESRRLFQQILSGVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE- 170 (476)
T ss_dssp ECCSSEEHHHHTTSSS-SCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSGGGEEECTTCCEEECCCSSCEECCTTC-
T ss_pred eCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCCcccccHHHEEEecCCCeEEEeccchhhccccc-
Confidence 9999999999998654 7999999999999999999999 8999999999999999999999999999998764322
Q ss_pred cccccccccccccCccCCCCCCC-CcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhcccccCCC
Q 048430 836 VTQTMTLATIGYMAPEYGSEGIV-SISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLLSR 914 (973)
Q Consensus 836 ~~~~~~~~~~~y~aPE~~~~~~~-~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 914 (973)
......||+.|+|||.+.+..+ +.++||||+||++|||++|+.||+.... .........+ ...
T Consensus 171 -~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~-----~~~~~~i~~~--------~~~-- 234 (476)
T 2y94_A 171 -FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHV-----PTLFKKICDG--------IFY-- 234 (476)
T ss_dssp -CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSS-----HHHHHHHHTT--------CCC--
T ss_pred -cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCH-----HHHHHHHhcC--------CcC--
Confidence 2334579999999998887765 7899999999999999999999975321 1111111110 000
Q ss_pred CchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 915 EDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
.+..+++++.+++.+||+.||++|||++|+++|
T Consensus 235 ----------~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~h 267 (476)
T 2y94_A 235 ----------TPQYLNPSVISLLKHMLQVDPMKRATIKDIREH 267 (476)
T ss_dssp ----------CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred ----------CCccCCHHHHHHHHHHcCCCchhCcCHHHHHhC
Confidence 011234568899999999999999999999986
No 166
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=5.5e-38 Score=349.32 Aligned_cols=247 Identities=27% Similarity=0.367 Sum_probs=201.7
Q ss_pred cCCCCCccccccCceEEEEEEe-CCCeEEEEEEEeccc---hhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEEE
Q 048430 680 NGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQE---DRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALIM 755 (973)
Q Consensus 680 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 755 (973)
+.|...+.||+|+||.||+|+. .+++.||||++.... ....+.+.+|++++++++||||+++++++...+..++||
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 133 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 133 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence 3477889999999999999985 679999999987542 334567899999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCCCC
Q 048430 756 QYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGVDP 835 (973)
Q Consensus 756 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 835 (973)
||+. |++.+++......+++.++..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||++......
T Consensus 134 e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~-- 207 (348)
T 1u5q_A 134 EYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA-- 207 (348)
T ss_dssp ECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB--
T ss_pred ecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEeeccCceecCCC--
Confidence 9997 6898888766668999999999999999999999 789999999999999999999999999999865422
Q ss_pred cccccccccccccCccCC---CCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhcccccC
Q 048430 836 VTQTMTLATIGYMAPEYG---SEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLL 912 (973)
Q Consensus 836 ~~~~~~~~~~~y~aPE~~---~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 912 (973)
....||+.|+|||.+ ....++.++|||||||++|||++|+.||....... .+....... .+...
T Consensus 208 ---~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~-~~~~~~~~~---------~~~~~ 274 (348)
T 1u5q_A 208 ---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-ALYHIAQNE---------SPALQ 274 (348)
T ss_dssp ---CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHHHHHHSC---------CCCCC
T ss_pred ---CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHhcC---------CCCCC
Confidence 235699999999976 35678999999999999999999999986432111 011111100 00000
Q ss_pred CCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 048430 913 SREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADL 958 (973)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L 958 (973)
...+++.+.+++.+||+.||++|||++|+++|-
T Consensus 275 -------------~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h~ 307 (348)
T 1u5q_A 275 -------------SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHR 307 (348)
T ss_dssp -------------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCH
T ss_pred -------------CCCCCHHHHHHHHHHcccChhhCcCHHHHhhCh
Confidence 012355688999999999999999999999764
No 167
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=1.3e-37 Score=343.47 Aligned_cols=252 Identities=22% Similarity=0.317 Sum_probs=206.4
Q ss_pred hcCCCCCccccccCceEEEEEEeC-CCeEEEEEEEeccchh------hHHHHHHHHHHHHhccCCceeEEEeeeecCCee
Q 048430 679 TNGFGESNLLGSGSFDNVYKATLA-NGVSVAVKVFNLQEDR------ALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFK 751 (973)
Q Consensus 679 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 751 (973)
.++|...+.||+|+||.||+|+.. +++.||||+++..... ..+.+.+|+.++++++||||+++++++.+.+..
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 356888999999999999999964 6899999998754321 357899999999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCC----cEEEeecccc
Q 048430 752 ALIMQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDM----VAHLGDFGIA 827 (973)
Q Consensus 752 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~----~~kl~Dfgla 827 (973)
++||||+++++|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++ .+||+|||++
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH---~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~ 166 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQKE-SLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166 (321)
T ss_dssp EEEECCCCSCBHHHHHHTCS-CEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCTTSSSCCEEECCCTTC
T ss_pred EEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCChHHEEEecCCCCcCCEEEccCccc
Confidence 99999999999999998754 7899999999999999999999 78999999999999999888 7999999999
Q ss_pred cccCCCCCcccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhc
Q 048430 828 KLLDGVDPVTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVV 907 (973)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (973)
....... ......||+.|+|||......++.++|||||||++|||++|+.||..... ...........
T Consensus 167 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-----~~~~~~i~~~~----- 234 (321)
T 2a2a_A 167 HEIEDGV--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK-----QETLANITSVS----- 234 (321)
T ss_dssp EECCTTC--CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH-----HHHHHHHHTTC-----
T ss_pred eecCccc--cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCH-----HHHHHHHHhcc-----
Confidence 8764322 22345689999999999888999999999999999999999999865321 11111110000
Q ss_pred ccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 908 DANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 908 d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
. . .. ......++..+.+++.+||+.||++|||++|+++|
T Consensus 235 ---~-~-~~------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~h 273 (321)
T 2a2a_A 235 ---Y-D-FD------EEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRH 273 (321)
T ss_dssp ---C-C-CC------HHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHS
T ss_pred ---c-c-cC------hhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0 0 00 00112345678999999999999999999999986
No 168
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=7.3e-39 Score=351.78 Aligned_cols=254 Identities=22% Similarity=0.343 Sum_probs=196.0
Q ss_pred hcCCCCCccccccCceEEEEEEe-CCCeEEEEEEEeccc---hhhHHHHHHHHHHHHhccCCceeEEEeeeecCC----e
Q 048430 679 TNGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQE---DRALKSFDTECEVMRRIRHRNLIKIVSSCSNPG----F 750 (973)
Q Consensus 679 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----~ 750 (973)
.++|...+.||+|+||.||+|+. .+++.||||+++... ......+.+|+.++++++||||+++++++.... .
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 90 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence 46788899999999999999995 679999999997542 234567899999999999999999999986544 3
Q ss_pred eEEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeeccccccc
Q 048430 751 KALIMQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLL 830 (973)
Q Consensus 751 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~ 830 (973)
.++||||+++++|.+++.... .+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 91 ~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~ 166 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVHTEG-PMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAI 166 (311)
T ss_dssp EEEEEECCCEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEETTSCEEECCCSCC---
T ss_pred cEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCCcCCCCHHHEEEcCCCCEEEeeccCcccc
Confidence 499999999999999998765 6999999999999999999999 789999999999999999999999999999866
Q ss_pred CCCCCc--ccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhcc
Q 048430 831 DGVDPV--TQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVD 908 (973)
Q Consensus 831 ~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d 908 (973)
...... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||......+. ....... .
T Consensus 167 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~-~~~~~~~---~------- 235 (311)
T 3ork_A 167 ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSV-AYQHVRE---D------- 235 (311)
T ss_dssp ---------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHC---C-------
T ss_pred cccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHhcC---C-------
Confidence 432221 22335689999999999888999999999999999999999999965322110 0111100 0
Q ss_pred cccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 909 ANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 909 ~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
.. ........++.++.+++.+||+.||++||++.+++++
T Consensus 236 ------~~----~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~ 274 (311)
T 3ork_A 236 ------PI----PPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRA 274 (311)
T ss_dssp ------CC----CHHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHH
T ss_pred ------CC----CcccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHH
Confidence 00 0001112356778999999999999999987766654
No 169
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=4.6e-38 Score=345.92 Aligned_cols=264 Identities=23% Similarity=0.411 Sum_probs=201.0
Q ss_pred HHhcCCCCCccccccCceEEEEEEeC----CCeEEEEEEEeccc--hhhHHHHHHHHHHHHhccCCceeEEEeeeecCC-
Q 048430 677 QATNGFGESNLLGSGSFDNVYKATLA----NGVSVAVKVFNLQE--DRALKSFDTECEVMRRIRHRNLIKIVSSCSNPG- 749 (973)
Q Consensus 677 ~~~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~- 749 (973)
...++|...+.||+|+||.||+|... +++.||||+++... ....+.+.+|+.++++++||||+++++++.+.+
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 110 (313)
T 3brb_A 31 IDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSS 110 (313)
T ss_dssp CCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC---
T ss_pred cCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccc
Confidence 34567888899999999999999753 45689999987542 344578999999999999999999999997654
Q ss_pred ----eeEEEEEecCCCCHHHHhhhC-----CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEE
Q 048430 750 ----FKALIMQYMPQGSLEKWLYSH-----NYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAH 820 (973)
Q Consensus 750 ----~~~lv~e~~~~gsL~~~l~~~-----~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~k 820 (973)
..++||||+++|+|.+++... ...+++..++.++.|+++||.||| +.+|+||||||+||+++.++.+|
T Consensus 111 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dikp~NIli~~~~~~k 187 (313)
T 3brb_A 111 QGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLS---NRNFLHRDLAARNCMLRDDMTVC 187 (313)
T ss_dssp ----CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCSGGGEEECTTSCEE
T ss_pred cCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCcEE
Confidence 359999999999999998532 246999999999999999999999 89999999999999999999999
Q ss_pred EeecccccccCCCCCc-ccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCccccCcccHHHHHHhh
Q 048430 821 LGDFGIAKLLDGVDPV-TQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFT-RRKPTNEMFTGEMSLKQWVAES 898 (973)
Q Consensus 821 l~Dfgla~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~ 898 (973)
|+|||++......... ......+++.|+|||...+..++.++|||||||++|||++ |+.||...... .....+...
T Consensus 188 l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--~~~~~~~~~ 265 (313)
T 3brb_A 188 VADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNH--EMYDYLLHG 265 (313)
T ss_dssp ECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--GHHHHHHTT
T ss_pred EeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHH--HHHHHHHcC
Confidence 9999999866432221 2233457889999999988899999999999999999999 88888653221 111111110
Q ss_pred CCcchhhhcccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHHHHHh
Q 048430 899 LPGAVTEVVDANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIKKILTQ 967 (973)
Q Consensus 899 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~~~~~~ 967 (973)
... ..+..++.++.+++.+||+.||++||++.|++++|+++.+.+++
T Consensus 266 ~~~----------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~lp~ 312 (313)
T 3brb_A 266 HRL----------------------KQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESLPD 312 (313)
T ss_dssp CCC----------------------CCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC--
T ss_pred CCC----------------------CCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCC
Confidence 000 01123456789999999999999999999999999999887653
No 170
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.9e-38 Score=350.60 Aligned_cols=262 Identities=24% Similarity=0.378 Sum_probs=204.7
Q ss_pred hcCCCCCccccccCceEEEEEEeC-CCeE----EEEEEEecc-chhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeE
Q 048430 679 TNGFGESNLLGSGSFDNVYKATLA-NGVS----VAVKVFNLQ-EDRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKA 752 (973)
Q Consensus 679 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~----vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 752 (973)
.++|...++||+|+||.||+|+.. +++. ||+|.+... .....+.+.+|+.++++++||||+++++++.... .+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~ 92 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EE
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ce
Confidence 357888999999999999999853 4443 577766433 2334678999999999999999999999998764 78
Q ss_pred EEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCC
Q 048430 753 LIMQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDG 832 (973)
Q Consensus 753 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~ 832 (973)
+|+||+.+|+|.+++......+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 93 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~ 169 (327)
T 3lzb_A 93 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169 (327)
T ss_dssp EEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCTTC------
T ss_pred EEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hCCCcCCCCCHHHEEEcCCCCEEEccCcceeEccC
Confidence 999999999999999987778999999999999999999999 78999999999999999999999999999987643
Q ss_pred CCCc-ccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCccccCcccHHHHHHhhCCcchhhhcccc
Q 048430 833 VDPV-TQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFT-RRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDAN 910 (973)
Q Consensus 833 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 910 (973)
.... ......+|+.|+|||.+.+..++.++|||||||++|||++ |+.||...... .+...+.....
T Consensus 170 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~--~~~~~~~~~~~---------- 237 (327)
T 3lzb_A 170 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS--EISSILEKGER---------- 237 (327)
T ss_dssp ----------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--GHHHHHHTTCC----------
T ss_pred ccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHH--HHHHHHHcCCC----------
Confidence 2222 2233456889999999988899999999999999999999 99999764322 12222211100
Q ss_pred cCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHHHHHhh
Q 048430 911 LLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIKKILTQA 968 (973)
Q Consensus 911 l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~~~~~~~ 968 (973)
...+..++.++.+++.+||+.||++||++.|+++.|+++.+...+.
T Consensus 238 ------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~~ 283 (327)
T 3lzb_A 238 ------------LPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARDPQRY 283 (327)
T ss_dssp ------------CCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTSHHHH
T ss_pred ------------CCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhCcCce
Confidence 0011224566889999999999999999999999999998655443
No 171
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.2e-38 Score=376.86 Aligned_cols=252 Identities=21% Similarity=0.370 Sum_probs=204.0
Q ss_pred cccccCceEEEEEEeC---CCeEEEEEEEeccc-hhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEEEEecCCCC
Q 048430 687 LLGSGSFDNVYKATLA---NGVSVAVKVFNLQE-DRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALIMQYMPQGS 762 (973)
Q Consensus 687 ~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 762 (973)
.||+|+||.||+|.+. ++..||||+++... ....+.+.+|++++++++||||++++++|.. +..++||||+++|+
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~ 421 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP 421 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence 7999999999999853 56789999997643 3356789999999999999999999999976 56899999999999
Q ss_pred HHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCCCCc--cccc
Q 048430 763 LEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGVDPV--TQTM 840 (973)
Q Consensus 763 L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~--~~~~ 840 (973)
|.+++......+++..+..++.||+.||+||| +++|+||||||+||+++.++.+||+|||+++........ ....
T Consensus 422 L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~ 498 (613)
T 2ozo_A 422 LHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSA 498 (613)
T ss_dssp HHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC-----------
T ss_pred HHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeeccC
Confidence 99999877667999999999999999999999 789999999999999999999999999999876432221 1122
Q ss_pred ccccccccCccCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCccccCcccHHHHHHhhCCcchhhhcccccCCCCchhh
Q 048430 841 TLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFT-RRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLLSREDEED 919 (973)
Q Consensus 841 ~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 919 (973)
..+|+.|+|||.+....++.++|||||||++|||++ |+.||...... .+...+... .
T Consensus 499 ~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~--~~~~~i~~~------------~-------- 556 (613)
T 2ozo_A 499 GKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP--EVMAFIEQG------------K-------- 556 (613)
T ss_dssp ---CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSH--HHHHHHHTT------------C--------
T ss_pred CCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHH--HHHHHHHcC------------C--------
Confidence 345689999999988899999999999999999998 99999753321 112211110 0
Q ss_pred hhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHHHHH
Q 048430 920 ADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIKKILT 966 (973)
Q Consensus 920 ~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~~~~~ 966 (973)
+...+..++.++.+++.+||+.+|++||++.++++.|+.+.....
T Consensus 557 --~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~~~ 601 (613)
T 2ozo_A 557 --RMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLA 601 (613)
T ss_dssp --CCCCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHHHS
T ss_pred --CCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHhc
Confidence 001122456789999999999999999999999999999877653
No 172
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.5e-37 Score=339.41 Aligned_cols=259 Identities=21% Similarity=0.369 Sum_probs=207.3
Q ss_pred CCCCccccccCceEEEEEEeC-C---CeEEEEEEEeccc-hhhHHHHHHHHHHHHhccCCceeEEEeeeecCCee-EEEE
Q 048430 682 FGESNLLGSGSFDNVYKATLA-N---GVSVAVKVFNLQE-DRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFK-ALIM 755 (973)
Q Consensus 682 ~~~~~~lg~G~~g~Vy~~~~~-~---~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~-~lv~ 755 (973)
|...++||+|+||.||+|+.. + +..||+|++.... ....+.+.+|+.++++++||||+++++++.+.+.. ++||
T Consensus 23 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~ 102 (298)
T 3pls_A 23 THSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLL 102 (298)
T ss_dssp EEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEE
T ss_pred EccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEE
Confidence 445688999999999999842 2 3479999986543 34467899999999999999999999999766554 9999
Q ss_pred EecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCCC-
Q 048430 756 QYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGVD- 834 (973)
Q Consensus 756 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~- 834 (973)
||+.+|+|.+++......+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++......
T Consensus 103 e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~ 179 (298)
T 3pls_A 103 PYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLA---EQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREY 179 (298)
T ss_dssp CCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGG
T ss_pred ecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCcEEeCcCCCcccccCCcc
Confidence 999999999999886668999999999999999999999 7899999999999999999999999999998654321
Q ss_pred --CcccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhcccccC
Q 048430 835 --PVTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLL 912 (973)
Q Consensus 835 --~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 912 (973)
........+|+.|+|||...+..++.++|||||||++|||++|+.|+...... ......+......
T Consensus 180 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~-~~~~~~~~~~~~~----------- 247 (298)
T 3pls_A 180 YSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDP-FDLTHFLAQGRRL----------- 247 (298)
T ss_dssp GCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCG-GGHHHHHHTTCCC-----------
T ss_pred cccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCH-HHHHHHhhcCCCC-----------
Confidence 11223446789999999999989999999999999999999966664332221 2222222211100
Q ss_pred CCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHHHHH
Q 048430 913 SREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIKKILT 966 (973)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~~~~~ 966 (973)
..+..+++.+.+++.+||+.||++|||++|+++.|+++.+.+.
T Consensus 248 -----------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~ 290 (298)
T 3pls_A 248 -----------PQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALL 290 (298)
T ss_dssp -----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCC
T ss_pred -----------CCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHHh
Confidence 0011235668899999999999999999999999999988754
No 173
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=7e-38 Score=341.92 Aligned_cols=260 Identities=23% Similarity=0.388 Sum_probs=205.6
Q ss_pred cCCCCCccccccCceEEEEEEeCC----CeEEEEEEEeccc-hhhHHHHHHHHHHHHhccCCceeEEEeee-ecCCeeEE
Q 048430 680 NGFGESNLLGSGSFDNVYKATLAN----GVSVAVKVFNLQE-DRALKSFDTECEVMRRIRHRNLIKIVSSC-SNPGFKAL 753 (973)
Q Consensus 680 ~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~-~~~~~~~l 753 (973)
..|...++||+|+||.||+|+..+ ...||+|.+.... ....+.+.+|+.++++++||||+++++++ ...+..++
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 104 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 104 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEE
Confidence 457778999999999999998532 3468999886543 34467899999999999999999999986 45668899
Q ss_pred EEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCC
Q 048430 754 IMQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGV 833 (973)
Q Consensus 754 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 833 (973)
||||+++|+|.+++......+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 105 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 181 (298)
T 3f66_A 105 VLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 181 (298)
T ss_dssp EEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCG
T ss_pred EEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCchheEEECCCCCEEECccccccccccc
Confidence 99999999999999877667999999999999999999999 789999999999999999999999999999866432
Q ss_pred CC---cccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCC-CCCCccccCcccHHHHHHhhCCcchhhhccc
Q 048430 834 DP---VTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRR-KPTNEMFTGEMSLKQWVAESLPGAVTEVVDA 909 (973)
Q Consensus 834 ~~---~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 909 (973)
.. .......+|+.|+|||...+..++.++||||+|+++|||++|. .||...... .....+......
T Consensus 182 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~--~~~~~~~~~~~~-------- 251 (298)
T 3f66_A 182 EYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF--DITVYLLQGRRL-------- 251 (298)
T ss_dssp GGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTT--THHHHHHTTCCC--------
T ss_pred chhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHH--HHHHHHhcCCCC--------
Confidence 21 1223345788999999998889999999999999999999954 455432211 111111110000
Q ss_pred ccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHHHHH
Q 048430 910 NLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIKKILT 966 (973)
Q Consensus 910 ~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~~~~~ 966 (973)
..+..++..+.+++.+||+.+|++||+++|+++.|+++.+.+.
T Consensus 252 --------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~ 294 (298)
T 3f66_A 252 --------------LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 294 (298)
T ss_dssp --------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTSC
T ss_pred --------------CCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhc
Confidence 0011235568899999999999999999999999999987653
No 174
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.1e-37 Score=353.58 Aligned_cols=274 Identities=21% Similarity=0.275 Sum_probs=195.6
Q ss_pred HHhcCCCCCccccccCceEEEEEEe-CCCeEEEEEEEecc--chhhHHHHHHHHHHHHhcc-CCceeEEEeeeecC--Ce
Q 048430 677 QATNGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQ--EDRALKSFDTECEVMRRIR-HRNLIKIVSSCSNP--GF 750 (973)
Q Consensus 677 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~--~~ 750 (973)
...++|...+.||+|+||.||+|.. .+++.||||++... .....+.+.+|+.+++++. ||||+++++++... ..
T Consensus 6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~ 85 (388)
T 3oz6_A 6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRD 85 (388)
T ss_dssp HHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSC
T ss_pred cccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCE
Confidence 3457899999999999999999985 57899999998543 2344567889999999997 99999999999654 47
Q ss_pred eEEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeeccccccc
Q 048430 751 KALIMQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLL 830 (973)
Q Consensus 751 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~ 830 (973)
.|+|||||+ ++|.+++... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+|+..
T Consensus 86 ~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~ 159 (388)
T 3oz6_A 86 VYLVFDYME-TDLHAVIRAN--ILEPVHKQYVVYQLIKVIKYLH---SGGLLHRDMKPSNILLNAECHVKVADFGLSRSF 159 (388)
T ss_dssp EEEEEECCS-EEHHHHHHHT--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEES
T ss_pred EEEEecccC-cCHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHeEEcCCCCEEecCCcccccc
Confidence 899999997 5999999875 6899999999999999999999 799999999999999999999999999999865
Q ss_pred CCCC--------------------CcccccccccccccCccCCCC-CCCCcchhHHHHHHHHHHHHhCCCCCCccccCcc
Q 048430 831 DGVD--------------------PVTQTMTLATIGYMAPEYGSE-GIVSISGDVYSFGILMMETFTRRKPTNEMFTGEM 889 (973)
Q Consensus 831 ~~~~--------------------~~~~~~~~~~~~y~aPE~~~~-~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~ 889 (973)
.... .......+||+.|+|||.+.+ ..++.++||||+||++|||++|+.||.+.... .
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~-~ 238 (388)
T 3oz6_A 160 VNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTM-N 238 (388)
T ss_dssp SSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-H
T ss_pred cccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHH-H
Confidence 3211 112234579999999998776 67899999999999999999999999653221 1
Q ss_pred cHHHHHHhhC-Ccc--hhhhccc-----------c----cCCCCchhh-----hhhHHhHHHHHHHHHHHHHhccccCCC
Q 048430 890 SLKQWVAESL-PGA--VTEVVDA-----------N----LLSREDEED-----ADDFATKKTCISYIMSLALKCSAEIPE 946 (973)
Q Consensus 890 ~~~~~~~~~~-~~~--~~~~~d~-----------~----l~~~~~~~~-----~~~~~~~~~~~~~l~~l~~~cl~~~P~ 946 (973)
.+...+.... +.. +..+..+ . ......... ......+..+++++.+++.+||+.||+
T Consensus 239 ~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~ 318 (388)
T 3oz6_A 239 QLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPN 318 (388)
T ss_dssp HHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGG
T ss_pred HHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcc
Confidence 1122211111 100 0000000 0 000000000 000001113467899999999999999
Q ss_pred CCCCHHHHHHH
Q 048430 947 ERINVKDALAD 957 (973)
Q Consensus 947 ~Rpt~~evl~~ 957 (973)
+|||++|+++|
T Consensus 319 ~R~t~~e~l~H 329 (388)
T 3oz6_A 319 KRISANDALKH 329 (388)
T ss_dssp GSCCHHHHTTS
T ss_pred cCCCHHHHhCC
Confidence 99999999987
No 175
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=4e-38 Score=340.28 Aligned_cols=249 Identities=23% Similarity=0.330 Sum_probs=202.6
Q ss_pred HhcCCCCCccccccCceEEEEEEeC-CCeEEEEEEEeccc---hhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEE
Q 048430 678 ATNGFGESNLLGSGSFDNVYKATLA-NGVSVAVKVFNLQE---DRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKAL 753 (973)
Q Consensus 678 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 753 (973)
+.++|...+.||+|+||.||+|... +++.||||++.... ......+.+|+.++++++||||+++++++.+.+..++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 86 (279)
T 3fdn_A 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL 86 (279)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEE
Confidence 3567888999999999999999854 67899999986542 2234678899999999999999999999999999999
Q ss_pred EEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCC
Q 048430 754 IMQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGV 833 (973)
Q Consensus 754 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 833 (973)
||||+++|+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++.....
T Consensus 87 v~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~qi~~~l~~LH---~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~- 161 (279)
T 3fdn_A 87 ILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS- 161 (279)
T ss_dssp EECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---TTTCEECCCCGGGEEECTTSCEEECSCCEESCC---
T ss_pred EEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCEecccCChHhEEEcCCCCEEEEeccccccCCc-
Confidence 999999999999998754 6899999999999999999999 89999999999999999999999999999865432
Q ss_pred CCcccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhcccccCC
Q 048430 834 DPVTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLLS 913 (973)
Q Consensus 834 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 913 (973)
.......+++.|+|||.+.+..++.++||||||+++|||++|+.||......+ ....+.... .
T Consensus 162 --~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~~~~~~~~-----------~-- 224 (279)
T 3fdn_A 162 --SRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE--TYKRISRVE-----------F-- 224 (279)
T ss_dssp --------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH--HHHHHHHTC-----------C--
T ss_pred --ccccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHH--HHHHHHhCC-----------C--
Confidence 22234568999999999988899999999999999999999999986422111 111111000 0
Q ss_pred CCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 048430 914 REDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADL 958 (973)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L 958 (973)
..+..++..+.+++.+||+.||++||+++|+++|-
T Consensus 225 ----------~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h~ 259 (279)
T 3fdn_A 225 ----------TFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHP 259 (279)
T ss_dssp ----------CCCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHCH
T ss_pred ----------CCCCcCCHHHHHHHHHHhccChhhCCCHHHHhhCc
Confidence 00112345688999999999999999999999983
No 176
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.1e-37 Score=336.13 Aligned_cols=246 Identities=23% Similarity=0.364 Sum_probs=182.1
Q ss_pred cCCCCCccccccCceEEEEEEe-CCCeEEEEEEEeccc---hhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEEE
Q 048430 680 NGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQE---DRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALIM 755 (973)
Q Consensus 680 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 755 (973)
++|...+.||+|+||.||+|+. .+++.||+|++.... ....+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEE
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEe
Confidence 5799999999999999999984 578999999986542 233567889999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCCCC
Q 048430 756 QYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGVDP 835 (973)
Q Consensus 756 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 835 (973)
||+ ++++.+++.... .+++.++..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++.......
T Consensus 93 e~~-~~~l~~~~~~~~-~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~- 166 (275)
T 2eue_A 93 EYA-GNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN- 166 (275)
T ss_dssp ECC-CEEHHHHHHTSS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTSCEEECCSSCC--------
T ss_pred hhc-CCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCeeccCChHhEEECCCCCEEEeecccceeccCcc-
Confidence 999 678888887654 6999999999999999999999 7899999999999999999999999999998654322
Q ss_pred cccccccccccccCccCCCCCCC-CcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhcccccCCC
Q 048430 836 VTQTMTLATIGYMAPEYGSEGIV-SISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLLSR 914 (973)
Q Consensus 836 ~~~~~~~~~~~y~aPE~~~~~~~-~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 914 (973)
......||+.|+|||.+.+..+ +.++||||+||++|||++|+.||..... ........ ....
T Consensus 167 -~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-----~~~~~~~~--------~~~~--- 229 (275)
T 2eue_A 167 -FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESI-----PVLFKNIS--------NGVY--- 229 (275)
T ss_dssp ---------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHHHH--------HTCC---
T ss_pred -cccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHH--------hCCC---
Confidence 2234468999999998877665 7899999999999999999999865221 11111100 0000
Q ss_pred CchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 915 EDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
..+..+++.+.+++.+||+.||++|||++|+++|
T Consensus 230 ---------~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 263 (275)
T 2eue_A 230 ---------TLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp ---------CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred ---------CCCccCCHHHHHHHHHHhhcCHhHCCCHHHHhhC
Confidence 0011235668899999999999999999999987
No 177
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=2.5e-38 Score=349.41 Aligned_cols=272 Identities=19% Similarity=0.238 Sum_probs=200.2
Q ss_pred cCCCCCccccccCceEEEEEEeC-CCeEEEEEEEeccchh-hHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEEEEe
Q 048430 680 NGFGESNLLGSGSFDNVYKATLA-NGVSVAVKVFNLQEDR-ALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALIMQY 757 (973)
Q Consensus 680 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 757 (973)
++|...+.||+|+||.||+|+.. +++.||||++...... ....+.+|+.++++++||||+++++++...+..++||||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 81 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence 57888999999999999999965 7899999998654322 122456799999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCCCCcc
Q 048430 758 MPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGVDPVT 837 (973)
Q Consensus 758 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~ 837 (973)
++ |+|.+++......+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++..... ...
T Consensus 82 ~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~-~~~ 156 (324)
T 3mtl_A 82 LD-KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCH---RQKVLHRDLKPQNLLINERGELKLADFGLARAKSIP-TKT 156 (324)
T ss_dssp CS-EEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEEESSCCGGGEEECTTCCEEECSSSEEECC-------
T ss_pred cc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCcCHHHEEECCCCCEEEccCcccccccCC-ccc
Confidence 97 5999999887777999999999999999999999 799999999999999999999999999999865422 222
Q ss_pred cccccccccccCccCCCC-CCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhC---Ccchhhhcccc-c-
Q 048430 838 QTMTLATIGYMAPEYGSE-GIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESL---PGAVTEVVDAN-L- 911 (973)
Q Consensus 838 ~~~~~~~~~y~aPE~~~~-~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~d~~-l- 911 (973)
.....+|+.|+|||.+.+ ..++.++||||+||++|||++|+.||......+ .......... +..+....... .
T Consensus 157 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~ 235 (324)
T 3mtl_A 157 YDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEE-QLHFIFRILGTPTEETWPGILSNEEFK 235 (324)
T ss_dssp ------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCTTTSTTGGGCHHHH
T ss_pred cccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCChHhchhhhcchhhc
Confidence 334568999999998765 568999999999999999999999997632211 1122111111 11111111100 0
Q ss_pred -CCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 912 -LSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 912 -~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
.................++.++.+++.+||+.||++|||++|+++|
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 282 (324)
T 3mtl_A 236 TYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKH 282 (324)
T ss_dssp HTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred ccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 0000000000111223456778999999999999999999999985
No 178
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=1e-37 Score=343.64 Aligned_cols=264 Identities=19% Similarity=0.235 Sum_probs=199.3
Q ss_pred cCCCCC-ccccccCceEEEEEEe-CCCeEEEEEEEeccchhhHHHHHHHHHHHHhc-cCCceeEEEeeeecCCeeEEEEE
Q 048430 680 NGFGES-NLLGSGSFDNVYKATL-ANGVSVAVKVFNLQEDRALKSFDTECEVMRRI-RHRNLIKIVSSCSNPGFKALIMQ 756 (973)
Q Consensus 680 ~~~~~~-~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e 756 (973)
+.|... +.||+|+||.||+|+. .+++.||||++........+.+.+|++++.++ +||||+++++++.+.+..++|||
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e 91 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFE 91 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEE
Confidence 456663 7899999999999984 57999999999766555567899999999985 79999999999999999999999
Q ss_pred ecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCc---EEEeecccccccCCC
Q 048430 757 YMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMV---AHLGDFGIAKLLDGV 833 (973)
Q Consensus 757 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~---~kl~Dfgla~~~~~~ 833 (973)
|+++|+|.+++.... .+++.++..++.|++.||+||| +.+|+||||||+||+++.++. +||+|||++......
T Consensus 92 ~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~ 167 (316)
T 2ac3_A 92 KMRGGSILSHIHKRR-HFNELEASVVVQDVASALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLN 167 (316)
T ss_dssp CCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-----
T ss_pred cCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---hCCceeCCCCHHHEEEccCCCcCceEEEEccCccccccC
Confidence 999999999998764 6899999999999999999999 789999999999999998776 999999998765321
Q ss_pred CC------cccccccccccccCccCCCC-----CCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCC--
Q 048430 834 DP------VTQTMTLATIGYMAPEYGSE-----GIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLP-- 900 (973)
Q Consensus 834 ~~------~~~~~~~~~~~y~aPE~~~~-----~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~-- 900 (973)
.. .......||+.|+|||.+.. ..++.++|||||||++|||++|+.||......+..... ....
T Consensus 168 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~---~~~~~~ 244 (316)
T 2ac3_A 168 GDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDR---GEACPA 244 (316)
T ss_dssp --------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC-------CCHH
T ss_pred CccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccc---cccchh
Confidence 11 11223469999999998764 45789999999999999999999999764332211000 0000
Q ss_pred --cchhhhcccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 901 --GAVTEVVDANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 901 --~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
....+.+........ ......++.++.+++.+||+.||++||+++|+++|
T Consensus 245 ~~~~~~~~i~~~~~~~~-------~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 296 (316)
T 2ac3_A 245 CQNMLFESIQEGKYEFP-------DKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQH 296 (316)
T ss_dssp HHHHHHHHHHHCCCCCC-------HHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHHHHHHHhccCcccC-------chhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 000000000000000 00112346678999999999999999999999986
No 179
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=8.7e-38 Score=348.85 Aligned_cols=259 Identities=22% Similarity=0.296 Sum_probs=202.0
Q ss_pred HHHHhcCCCCCccccccCceEEEEEEe-CCCeEEEEEEEeccc-----hhhHHHHHHHHHHHHhccCCceeEEEeeeecC
Q 048430 675 LQQATNGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQE-----DRALKSFDTECEVMRRIRHRNLIKIVSSCSNP 748 (973)
Q Consensus 675 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 748 (973)
+....++|...+.||+|+||.||+|.. .+++.||+|++.... ....+.+.+|++++++++||||+++++++.+.
T Consensus 21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~ 100 (345)
T 3hko_A 21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDE 100 (345)
T ss_dssp HHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred hhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccC
Confidence 445667899999999999999999986 568899999986542 34457899999999999999999999999999
Q ss_pred CeeEEEEEecCCCCHHHHhhhC---------------------------------------CCCCCHHHHHHHHHHHHHH
Q 048430 749 GFKALIMQYMPQGSLEKWLYSH---------------------------------------NYSLTIRQRLDIMIDVASA 789 (973)
Q Consensus 749 ~~~~lv~e~~~~gsL~~~l~~~---------------------------------------~~~l~~~~~~~i~~~i~~~ 789 (973)
+..++||||+++|+|.+++... ...+++..+..++.|++.|
T Consensus 101 ~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~ 180 (345)
T 3hko_A 101 QYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSA 180 (345)
T ss_dssp SEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHH
Confidence 9999999999999999998521 1123577788999999999
Q ss_pred HHHhhhcCCCCeEEccCCCCcEEeCCCC--cEEEeecccccccCCCC---CcccccccccccccCccCCCC--CCCCcch
Q 048430 790 LEYLHHGYSTPIIHCDLKPNNVLLDDDM--VAHLGDFGIAKLLDGVD---PVTQTMTLATIGYMAPEYGSE--GIVSISG 862 (973)
Q Consensus 790 L~~LH~~~~~~ivH~dlk~~Nill~~~~--~~kl~Dfgla~~~~~~~---~~~~~~~~~~~~y~aPE~~~~--~~~~~~s 862 (973)
|+||| +.+|+||||||+||+++.++ .+||+|||+++...... ........||+.|+|||.+.. ..++.++
T Consensus 181 l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~ 257 (345)
T 3hko_A 181 LHYLH---NQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKC 257 (345)
T ss_dssp HHHHH---HTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHH
T ss_pred HHHHH---HCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHH
Confidence 99999 78999999999999998776 89999999998653222 112345579999999998764 6789999
Q ss_pred hHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhcccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccc
Q 048430 863 DVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLLSREDEEDADDFATKKTCISYIMSLALKCSA 942 (973)
Q Consensus 863 Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~ 942 (973)
|||||||++|||++|+.||......+ ....... ....... .....+++++.+++.+||+
T Consensus 258 DiwslG~il~el~~g~~pf~~~~~~~-~~~~~~~------------~~~~~~~--------~~~~~~~~~~~~li~~~l~ 316 (345)
T 3hko_A 258 DAWSAGVLLHLLLMGAVPFPGVNDAD-TISQVLN------------KKLCFEN--------PNYNVLSPLARDLLSNLLN 316 (345)
T ss_dssp HHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHH------------CCCCTTS--------GGGGGSCHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHCCCCCCCCChHH-HHHHHHh------------cccccCC--------cccccCCHHHHHHHHHHcC
Confidence 99999999999999999986532211 1111111 1000000 0111245678999999999
Q ss_pred cCCCCCCCHHHHHHH
Q 048430 943 EIPEERINVKDALAD 957 (973)
Q Consensus 943 ~~P~~Rpt~~evl~~ 957 (973)
.||++||++.|+++|
T Consensus 317 ~~p~~Rps~~~~l~h 331 (345)
T 3hko_A 317 RNVDERFDAMRALQH 331 (345)
T ss_dssp SCTTTSCCHHHHHHS
T ss_pred CChhHCCCHHHHhcC
Confidence 999999999999986
No 180
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.9e-39 Score=355.34 Aligned_cols=266 Identities=22% Similarity=0.349 Sum_probs=190.0
Q ss_pred cCCCCCccccccCceEEEEEEeCCCeEEEEEEEeccchhhHHHHHHHHHHHHh--ccCCceeEEEeeeecCC----eeEE
Q 048430 680 NGFGESNLLGSGSFDNVYKATLANGVSVAVKVFNLQEDRALKSFDTECEVMRR--IRHRNLIKIVSSCSNPG----FKAL 753 (973)
Q Consensus 680 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~l~~~~~~~~----~~~l 753 (973)
++|...+.||+|+||.||+|+.. ++.||||+++... ...+.+|.+++.. ++||||+++++++.... ..++
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~l 78 (303)
T 3gxj_A 3 RTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL 78 (303)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-TT---HHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEE
T ss_pred ceeeehhhccCCCCeEEEEEEEc-CcceEEEEecccc---hhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEE
Confidence 57899999999999999999875 8999999986432 3567788888887 78999999999997765 7899
Q ss_pred EEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcC-----CCCeEEccCCCCcEEeCCCCcEEEeeccccc
Q 048430 754 IMQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGY-----STPIIHCDLKPNNVLLDDDMVAHLGDFGIAK 828 (973)
Q Consensus 754 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~-----~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~ 828 (973)
||||+++|+|.+++... .+++..+..++.|++.||+|||... +.+|+||||||+||+++.++.+||+|||+++
T Consensus 79 v~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nil~~~~~~~kl~DFg~a~ 156 (303)
T 3gxj_A 79 VSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV 156 (303)
T ss_dssp EEECCTTCCHHHHHHHC--CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCCGGGC-CCTTCCC-BCCCCC-C
T ss_pred EEeccCCCCHHHHHhcc--CcchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCCHHHeEECCCCCEEEeecCcce
Confidence 99999999999999765 5888899999999999999999321 4789999999999999999999999999997
Q ss_pred ccCCCCCcc---cccccccccccCccCCCCC------CCCcchhHHHHHHHHHHHHhC----------CCCCCccccCcc
Q 048430 829 LLDGVDPVT---QTMTLATIGYMAPEYGSEG------IVSISGDVYSFGILMMETFTR----------RKPTNEMFTGEM 889 (973)
Q Consensus 829 ~~~~~~~~~---~~~~~~~~~y~aPE~~~~~------~~~~~sDvws~Gvvl~elltg----------~~p~~~~~~~~~ 889 (973)
......... .....||+.|+|||.+... .++.++|||||||++|||++| +.||........
T Consensus 157 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~~~~~ 236 (303)
T 3gxj_A 157 RHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDP 236 (303)
T ss_dssp CEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTCC-CC
T ss_pred eccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccCCCCc
Confidence 664333221 2334699999999987765 345789999999999999999 555543322211
Q ss_pred cHHHHHHhhCCcchhhhcccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHHH
Q 048430 890 SLKQWVAESLPGAVTEVVDANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIKKI 964 (973)
Q Consensus 890 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~~~ 964 (973)
...... ..+.+....... ........+++.+.+++.+||+.||++|||++|+++.|+++.+.
T Consensus 237 ~~~~~~--------~~~~~~~~~~~~-----~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~~ 298 (303)
T 3gxj_A 237 SVEEMR--------KVVCEQKLRPNI-----PNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298 (303)
T ss_dssp CCC-CH--------HHHTTSCCCCCC-----CGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CCC
T ss_pred cHHHHH--------HHHHHhhcCCCc-----cccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhhh
Confidence 111111 111111111100 11111235677899999999999999999999999999987654
No 181
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=8.1e-39 Score=376.71 Aligned_cols=256 Identities=27% Similarity=0.440 Sum_probs=209.1
Q ss_pred HhcCCCCCccccccCceEEEEEEeCCCeEEEEEEEeccchhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEEEEe
Q 048430 678 ATNGFGESNLLGSGSFDNVYKATLANGVSVAVKVFNLQEDRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALIMQY 757 (973)
Q Consensus 678 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 757 (973)
..++|...+.||+|+||.||+|.+..+..||||+++... ...+.|.+|+++|++++||||+++++++.+ +..++||||
T Consensus 265 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~ 342 (535)
T 2h8h_A 265 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEY 342 (535)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECC
T ss_pred chhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeeh
Confidence 345677889999999999999999888899999997543 234689999999999999999999999976 678999999
Q ss_pred cCCCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCCCCc
Q 048430 758 MPQGSLEKWLYSHN-YSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGVDPV 836 (973)
Q Consensus 758 ~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 836 (973)
+++|+|.+++.... ..+++.++..++.||+.||+||| +++|+||||||+|||++.++.+||+|||+++........
T Consensus 343 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~ 419 (535)
T 2h8h_A 343 MSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT 419 (535)
T ss_dssp CTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHH
T ss_pred hcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHhhEEEcCCCcEEEcccccceecCCCcee
Confidence 99999999997532 45899999999999999999999 799999999999999999999999999999865432111
Q ss_pred ccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCccccCcccHHHHHHhhCCcchhhhcccccCCCC
Q 048430 837 TQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFT-RRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLLSRE 915 (973)
Q Consensus 837 ~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 915 (973)
......++..|+|||.+....++.++|||||||++|||++ |+.||......+ ....+.. + ..
T Consensus 420 ~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~--~~~~i~~---~---------~~--- 482 (535)
T 2h8h_A 420 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE--VLDQVER---G---------YR--- 482 (535)
T ss_dssp TTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHH--HHHHHHT---T---------CC---
T ss_pred cccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHc---C---------CC---
Confidence 2233456789999999888899999999999999999999 899986532111 1111110 0 00
Q ss_pred chhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHH
Q 048430 916 DEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIK 962 (973)
Q Consensus 916 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~ 962 (973)
...+..++..+.+++.+||+.||++||+++++++.|+.+.
T Consensus 483 -------~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~ 522 (535)
T 2h8h_A 483 -------MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 522 (535)
T ss_dssp -------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSS
T ss_pred -------CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 0111245677899999999999999999999999998764
No 182
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.4e-37 Score=341.88 Aligned_cols=272 Identities=21% Similarity=0.236 Sum_probs=201.7
Q ss_pred cCCCCCccccccCceEEEEEEeC-CCeEEEEEEEeccch--hhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEEEE
Q 048430 680 NGFGESNLLGSGSFDNVYKATLA-NGVSVAVKVFNLQED--RALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALIMQ 756 (973)
Q Consensus 680 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 756 (973)
++|...+.||+|+||.||+|+.. +++.||||++..... ...+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE 82 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence 57888999999999999999964 589999998865432 335678899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCCCCc
Q 048430 757 YMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGVDPV 836 (973)
Q Consensus 757 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 836 (973)
|+++++|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||.+....... .
T Consensus 83 ~~~~~~l~~~~~~~~-~~~~~~~~~i~~~l~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~ 157 (311)
T 4agu_A 83 YCDHTVLHELDRYQR-GVPEHLVKSITWQTLQAVNFCH---KHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPS-D 157 (311)
T ss_dssp CCSEEHHHHHHHTSS-CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred eCCCchHHHHHhhhc-CCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCcc-c
Confidence 999999999887654 6999999999999999999999 7899999999999999999999999999998765322 2
Q ss_pred ccccccccccccCccCCCC-CCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhC--Ccchhhhcc-cccC
Q 048430 837 TQTMTLATIGYMAPEYGSE-GIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESL--PGAVTEVVD-ANLL 912 (973)
Q Consensus 837 ~~~~~~~~~~y~aPE~~~~-~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~d-~~l~ 912 (973)
......+|+.|+|||.+.+ ..++.++||||+||++|||++|+.||......+ .......... ......... ....
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (311)
T 4agu_A 158 YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVD-QLYLIRKTLGDLIPRHQQVFSTNQYF 236 (311)
T ss_dssp --------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCSCCHHHHHHHHTCGGG
T ss_pred ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhccccccccccccccccc
Confidence 2334568999999998765 678999999999999999999999996533221 1111111100 000000000 0000
Q ss_pred CC-C--ch-hhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 913 SR-E--DE-EDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 913 ~~-~--~~-~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
.. . .. ...........++.++.+++.+||+.||++|||++|+++|
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 237 SGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp TTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred ccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 00 0 00 0000001112356778999999999999999999999976
No 183
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=3.1e-38 Score=343.38 Aligned_cols=261 Identities=23% Similarity=0.335 Sum_probs=208.9
Q ss_pred hcCCCCCc-cccccCceEEEEEEe---CCCeEEEEEEEeccc--hhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeE
Q 048430 679 TNGFGESN-LLGSGSFDNVYKATL---ANGVSVAVKVFNLQE--DRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKA 752 (973)
Q Consensus 679 ~~~~~~~~-~lg~G~~g~Vy~~~~---~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 752 (973)
.++|...+ .||+|+||.||+|.. .+++.||||+++... ....+.+.+|++++++++||||+++++++ ..+..+
T Consensus 15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~ 93 (291)
T 1xbb_A 15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWM 93 (291)
T ss_dssp GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEE
T ss_pred chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcE
Confidence 34566666 999999999999963 357899999987543 23357899999999999999999999999 566789
Q ss_pred EEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCC
Q 048430 753 LIMQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDG 832 (973)
Q Consensus 753 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~ 832 (973)
+||||+++++|.+++.... .+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++.....
T Consensus 94 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 169 (291)
T 1xbb_A 94 LVMEMAELGPLNKYLQQNR-HVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRA 169 (291)
T ss_dssp EEEECCTTEEHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTCEECCT
T ss_pred EEEEeCCCCCHHHHHHhCc-CCCHHHHHHHHHHHHHHHHHHH---hCCeEcCCCCcceEEEeCCCcEEEccCCcceeecc
Confidence 9999999999999998765 6999999999999999999999 78999999999999999999999999999987654
Q ss_pred CCCcc--cccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCccccCcccHHHHHHhhCCcchhhhccc
Q 048430 833 VDPVT--QTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFT-RRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDA 909 (973)
Q Consensus 833 ~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 909 (973)
..... .....+++.|+|||......++.++||||||+++|||++ |+.||...... .....+.....
T Consensus 170 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~~~~~~~~~~~--------- 238 (291)
T 1xbb_A 170 DENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS--EVTAMLEKGER--------- 238 (291)
T ss_dssp TCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--HHHHHHHTTCC---------
T ss_pred CCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHH--HHHHHHHcCCC---------
Confidence 33222 222346789999999888889999999999999999999 99998653221 11111111000
Q ss_pred ccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHHHHHhh
Q 048430 910 NLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIKKILTQA 968 (973)
Q Consensus 910 ~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~~~~~~~ 968 (973)
...+..++.++.+++.+||+.||++||++.|+++.|+++....+.+
T Consensus 239 -------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~~ 284 (291)
T 1xbb_A 239 -------------MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVNE 284 (291)
T ss_dssp -------------CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHHHHH
T ss_pred -------------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhhc
Confidence 0011234567899999999999999999999999999998876654
No 184
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=2.3e-37 Score=351.02 Aligned_cols=250 Identities=21% Similarity=0.272 Sum_probs=192.7
Q ss_pred cCCCCC-ccccccCceEEEEEEeC-CCeEEEEEEEeccchhhHHHHHHHHHHHHh-ccCCceeEEEeeeec----CCeeE
Q 048430 680 NGFGES-NLLGSGSFDNVYKATLA-NGVSVAVKVFNLQEDRALKSFDTECEVMRR-IRHRNLIKIVSSCSN----PGFKA 752 (973)
Q Consensus 680 ~~~~~~-~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~-l~h~niv~l~~~~~~----~~~~~ 752 (973)
++|... ++||+|+||.||+|... +++.||||+++.. ..+.+|+.++.+ .+||||+++++++.. ....+
T Consensus 61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~ 135 (400)
T 1nxk_A 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 135 (400)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEE
Confidence 456555 68999999999999864 6899999998632 456788888754 589999999998864 56789
Q ss_pred EEEEecCCCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCC---CCcEEEeeccccc
Q 048430 753 LIMQYMPQGSLEKWLYSHN-YSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDD---DMVAHLGDFGIAK 828 (973)
Q Consensus 753 lv~e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~---~~~~kl~Dfgla~ 828 (973)
+||||+++|+|.+++.... ..+++.++..++.||+.||.||| +.+|+||||||+||+++. ++.+||+|||+++
T Consensus 136 lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~ 212 (400)
T 1nxk_A 136 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK 212 (400)
T ss_dssp EEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSTTCCEEECCCTTCE
T ss_pred EEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCcCcceEEEecCCCCccEEEEeccccc
Confidence 9999999999999998754 46999999999999999999999 789999999999999998 7899999999998
Q ss_pred ccCCCCCcccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcc--cHHHHHHhhCCcchhhh
Q 048430 829 LLDGVDPVTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEM--SLKQWVAESLPGAVTEV 906 (973)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~ 906 (973)
..... .......||+.|+|||++....++.++|||||||++|||++|+.||........ .....+....
T Consensus 213 ~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~------- 283 (400)
T 1nxk_A 213 ETTSH--NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQ------- 283 (400)
T ss_dssp ECC-------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTC-------
T ss_pred ccCCC--CccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCc-------
Confidence 65422 223445789999999999999999999999999999999999999976432221 1112111100
Q ss_pred cccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 048430 907 VDANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADL 958 (973)
Q Consensus 907 ~d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L 958 (973)
... .. .....++.++.+++.+||+.||++|||+.|+++|-
T Consensus 284 ----~~~-~~-------~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp 323 (400)
T 1nxk_A 284 ----YEF-PN-------PEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHP 323 (400)
T ss_dssp ----CCC-CT-------TTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSH
T ss_pred ----ccC-CC-------cccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCc
Confidence 000 00 00113456789999999999999999999999874
No 185
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=1.5e-37 Score=335.15 Aligned_cols=253 Identities=22% Similarity=0.315 Sum_probs=207.0
Q ss_pred hcCCCCCccccccCceEEEEEEeC-CCeEEEEEEEeccc-hhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEEEE
Q 048430 679 TNGFGESNLLGSGSFDNVYKATLA-NGVSVAVKVFNLQE-DRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALIMQ 756 (973)
Q Consensus 679 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 756 (973)
.++|...+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 85 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEE
Confidence 356888999999999999999965 78999999987553 3345788999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCCCC-
Q 048430 757 YMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGVDP- 835 (973)
Q Consensus 757 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~- 835 (973)
|+++++|.+++.... .+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||.+........
T Consensus 86 ~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~ 161 (276)
T 2yex_A 86 YCSGGELFDRIEPDI-GMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161 (276)
T ss_dssp CCTTEEGGGGSBTTT-BCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred ecCCCcHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcch
Confidence 999999999987654 6899999999999999999999 78999999999999999999999999999976532221
Q ss_pred cccccccccccccCccCCCCCCC-CcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhcccccCCC
Q 048430 836 VTQTMTLATIGYMAPEYGSEGIV-SISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLLSR 914 (973)
Q Consensus 836 ~~~~~~~~~~~y~aPE~~~~~~~-~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 914 (973)
.......|++.|+|||......+ +.++||||||+++|||++|+.||............+......
T Consensus 162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-------------- 227 (276)
T 2yex_A 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY-------------- 227 (276)
T ss_dssp CCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCTT--------------
T ss_pred hcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhcccc--------------
Confidence 12234568999999998877665 789999999999999999999997643332222222211000
Q ss_pred CchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 915 EDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
......++..+.+++.+||+.||++|||++|+++|
T Consensus 228 --------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (276)
T 2yex_A 228 --------LNPWKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (276)
T ss_dssp --------STTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred --------cCchhhcCHHHHHHHHHHCCCCchhCCCHHHHhcC
Confidence 00011245668899999999999999999999875
No 186
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=1.3e-37 Score=355.66 Aligned_cols=254 Identities=24% Similarity=0.294 Sum_probs=196.0
Q ss_pred HHhcCCCCCccccccCceEEEEEEe-CCCeEEEEEEEeccch--------hhHHHHHHHHHHHHhccCCceeEEEeeeec
Q 048430 677 QATNGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQED--------RALKSFDTECEVMRRIRHRNLIKIVSSCSN 747 (973)
Q Consensus 677 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~ 747 (973)
...++|...+.||+|+||.||+|.. .+++.||||++..... .....+.+|+.++++++||||+++++++..
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~ 211 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA 211 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec
Confidence 4567899999999999999999985 4689999999875421 122357899999999999999999999864
Q ss_pred CCeeEEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCC---CcEEEeec
Q 048430 748 PGFKALIMQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDD---MVAHLGDF 824 (973)
Q Consensus 748 ~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~---~~~kl~Df 824 (973)
+..++||||+++|+|.+++.... .+++.++..++.|++.||+||| +.+|+||||||+||+++.+ +.+||+||
T Consensus 212 -~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH---~~~ivHrDlkp~NIll~~~~~~~~~kl~DF 286 (419)
T 3i6u_A 212 -EDYYIVLELMEGGELFDKVVGNK-RLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDF 286 (419)
T ss_dssp -SEEEEEEECCTTCBGGGGTSSSC-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSSSCCEEECCS
T ss_pred -CceEEEEEcCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEecCCCcceEEEeec
Confidence 45799999999999999887654 7999999999999999999999 7899999999999999754 45999999
Q ss_pred ccccccCCCCCcccccccccccccCccCCC---CCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCc
Q 048430 825 GIAKLLDGVDPVTQTMTLATIGYMAPEYGS---EGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPG 901 (973)
Q Consensus 825 gla~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 901 (973)
|+++.... ........||+.|+|||.+. ...++.++|||||||++|||++|+.||...... ..+...+......
T Consensus 287 G~a~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~-~~~~~~i~~~~~~ 363 (419)
T 3i6u_A 287 GHSKILGE--TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ-VSLKDQITSGKYN 363 (419)
T ss_dssp STTTSCC-------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSS-CCHHHHHHTTCCC
T ss_pred ccceecCC--CccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcch-HHHHHHHhcCCCC
Confidence 99987643 22233457999999999875 366889999999999999999999999753322 2222222211100
Q ss_pred chhhhcccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 902 AVTEVVDANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 902 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
.. ......+++++.+++.+||+.||++||+++|+++|
T Consensus 364 ~~-------------------~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 400 (419)
T 3i6u_A 364 FI-------------------PEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 400 (419)
T ss_dssp CC-------------------HHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred CC-------------------chhhcccCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence 00 01112346678999999999999999999999986
No 187
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=3.9e-38 Score=351.17 Aligned_cols=263 Identities=17% Similarity=0.182 Sum_probs=199.9
Q ss_pred cCCCCCccccccCceEEEEEEeC----CCeEEEEEEEeccchh-----------hHHHHHHHHHHHHhccCCceeEEEee
Q 048430 680 NGFGESNLLGSGSFDNVYKATLA----NGVSVAVKVFNLQEDR-----------ALKSFDTECEVMRRIRHRNLIKIVSS 744 (973)
Q Consensus 680 ~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~-----------~~~~~~~e~~~l~~l~h~niv~l~~~ 744 (973)
++|...+.||+|+||.||+|... ++..||||+....... ....+.+|+..++.++||||++++++
T Consensus 37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~ 116 (345)
T 2v62_A 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS 116 (345)
T ss_dssp CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence 56888899999999999999965 5788999998755321 12346678889999999999999999
Q ss_pred eec----CCeeEEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCC--c
Q 048430 745 CSN----PGFKALIMQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDM--V 818 (973)
Q Consensus 745 ~~~----~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~--~ 818 (973)
+.. ....++||||+ +++|.+++.... .+++.+++.++.||+.||+||| +.+|+||||||+||+++.++ .
T Consensus 117 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~ 191 (345)
T 2v62_A 117 GLTEFKGRSYRFMVMERL-GIDLQKISGQNG-TFKKSTVLQLGIRMLDVLEYIH---ENEYVHGDIKAANLLLGYKNPDQ 191 (345)
T ss_dssp EEEESSSCEEEEEEEECE-EEEHHHHCBGGG-BCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEESSSTTS
T ss_pred cccccCCCcEEEEEEecc-CCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCcCHHHEEEccCCCCc
Confidence 877 77899999999 999999998765 7999999999999999999999 78999999999999999887 9
Q ss_pred EEEeecccccccCCCCC------cccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHH
Q 048430 819 AHLGDFGIAKLLDGVDP------VTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLK 892 (973)
Q Consensus 819 ~kl~Dfgla~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~ 892 (973)
+||+|||+++....... .......||+.|+|||.+.+..++.++|||||||++|||++|+.||...........
T Consensus 192 ~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~ 271 (345)
T 2v62_A 192 VYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQ 271 (345)
T ss_dssp EEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHH
T ss_pred EEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHHH
Confidence 99999999987632211 112345799999999999888899999999999999999999999964322222111
Q ss_pred HHHHhhCCcchhhhcccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHH
Q 048430 893 QWVAESLPGAVTEVVDANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKI 961 (973)
Q Consensus 893 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~ 961 (973)
....... ........ .......+++++.+++.+||+.||++||+++|+++.|+.+
T Consensus 272 ~~~~~~~-~~~~~~~~-------------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~ 326 (345)
T 2v62_A 272 TAKTNLL-DELPQSVL-------------KWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPH 326 (345)
T ss_dssp HHHHHHH-HTTTHHHH-------------HHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTT
T ss_pred HHHHhhc-ccccHHHH-------------hhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhcc
Confidence 1111100 00000000 0000013566799999999999999999999999998764
No 188
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=1.4e-37 Score=362.30 Aligned_cols=251 Identities=22% Similarity=0.339 Sum_probs=207.2
Q ss_pred hcCCCCCccccccCceEEEEEEeC-CCeEEEEEEEeccc---hhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEE
Q 048430 679 TNGFGESNLLGSGSFDNVYKATLA-NGVSVAVKVFNLQE---DRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALI 754 (973)
Q Consensus 679 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 754 (973)
.++|...++||+|+||.||+|+.. +|+.||||++.... ......+.+|+.++++++||||+++++++.+.+..++|
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 262 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV 262 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence 456888899999999999999964 79999999997542 23356788999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCC
Q 048430 755 MQYMPQGSLEKWLYSHN-YSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGV 833 (973)
Q Consensus 755 ~e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 833 (973)
|||+++|+|.+++.... ..+++..+..++.||+.||+||| +.+||||||||+||+++.++.+||+|||+++.....
T Consensus 263 mEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH---~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~ 339 (576)
T 2acx_A 263 LTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG 339 (576)
T ss_dssp ECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeccCCchheEEEeCCCCeEEEecccceecccC
Confidence 99999999999998654 35999999999999999999999 789999999999999999999999999999876432
Q ss_pred CCcccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcc--cHHHHHHhhCCcchhhhccccc
Q 048430 834 DPVTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEM--SLKQWVAESLPGAVTEVVDANL 911 (973)
Q Consensus 834 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~d~~l 911 (973)
. .....+||+.|+|||.+.+..++.++|||||||++|||++|+.||........ .+...+... +. .
T Consensus 340 ~--~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~~-~~--------~- 407 (576)
T 2acx_A 340 Q--TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEV-PE--------E- 407 (576)
T ss_dssp C--CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHHC-CC--------C-
T ss_pred c--cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhcc-cc--------c-
Confidence 2 22345799999999999888899999999999999999999999976432211 111111110 00 0
Q ss_pred CCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCC-----CHHHHHHH
Q 048430 912 LSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERI-----NVKDALAD 957 (973)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rp-----t~~evl~~ 957 (973)
.+..++.++.+++.+||+.||++|| +++|+++|
T Consensus 408 -------------~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~H 445 (576)
T 2acx_A 408 -------------YSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEH 445 (576)
T ss_dssp -------------CCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred -------------CCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhC
Confidence 0112356789999999999999999 78999876
No 189
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=2.8e-38 Score=349.23 Aligned_cols=264 Identities=24% Similarity=0.412 Sum_probs=212.7
Q ss_pred HHHHHHhcCCCCCccccccCceEEEEEEeC------CCeEEEEEEEeccc-hhhHHHHHHHHHHHHhccCCceeEEEeee
Q 048430 673 HELQQATNGFGESNLLGSGSFDNVYKATLA------NGVSVAVKVFNLQE-DRALKSFDTECEVMRRIRHRNLIKIVSSC 745 (973)
Q Consensus 673 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~ 745 (973)
++++...++|...+.||+|+||.||+|+.. +++.||||++.... ......+.+|+.++++++||||+++++++
T Consensus 18 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~ 97 (322)
T 1p4o_A 18 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV 97 (322)
T ss_dssp CTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEE
T ss_pred hhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEE
Confidence 344556778999999999999999999854 47889999987543 23456789999999999999999999999
Q ss_pred ecCCeeEEEEEecCCCCHHHHhhhCC---------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCC
Q 048430 746 SNPGFKALIMQYMPQGSLEKWLYSHN---------YSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDD 816 (973)
Q Consensus 746 ~~~~~~~lv~e~~~~gsL~~~l~~~~---------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~ 816 (973)
.+.+..++||||+++|+|.+++.... ..+++..+..++.|++.||.||| +.+|+||||||+||+++.+
T Consensus 98 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~NIli~~~ 174 (322)
T 1p4o_A 98 SQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAED 174 (322)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCSGGGEEECTT
T ss_pred ccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHH---HCCCccCCCccceEEEcCC
Confidence 99999999999999999999997532 35789999999999999999999 7899999999999999999
Q ss_pred CcEEEeecccccccCCCCCc-ccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCccccCcccHHHH
Q 048430 817 MVAHLGDFGIAKLLDGVDPV-TQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFT-RRKPTNEMFTGEMSLKQW 894 (973)
Q Consensus 817 ~~~kl~Dfgla~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~ 894 (973)
+.+||+|||+++........ ......+|+.|+|||.+.+..++.++|||||||++|||++ |+.||..... ...
T Consensus 175 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~-----~~~ 249 (322)
T 1p4o_A 175 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN-----EQV 249 (322)
T ss_dssp CCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCH-----HHH
T ss_pred CeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCH-----HHH
Confidence 99999999999865432221 2233457889999999888889999999999999999999 8888865321 111
Q ss_pred HHhhCCcchhhhcccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHH
Q 048430 895 VAESLPGAVTEVVDANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIKK 963 (973)
Q Consensus 895 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~~ 963 (973)
......+. ... .+..++..+.+++.+||+.||++||++.|++++|+++.+
T Consensus 250 ~~~~~~~~--------~~~-----------~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~ 299 (322)
T 1p4o_A 250 LRFVMEGG--------LLD-----------KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 299 (322)
T ss_dssp HHHHHTTC--------CCC-----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred HHHHHcCC--------cCC-----------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence 11111110 000 011345678999999999999999999999999987644
No 190
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=7.9e-38 Score=346.21 Aligned_cols=274 Identities=22% Similarity=0.270 Sum_probs=198.2
Q ss_pred HHhcCCCCCccccccCceEEEEEEe-CCCeEEEEEEEeccch--hhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEE
Q 048430 677 QATNGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQED--RALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKAL 753 (973)
Q Consensus 677 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 753 (973)
...++|...+.||+|+||.||+|+. .+++.||||+++.... ...+.+.+|+.++++++||||+++++++.+.+..++
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 110 (329)
T 3gbz_A 31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHL 110 (329)
T ss_dssp -CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEE
T ss_pred cchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEE
Confidence 3457899999999999999999984 5799999999865432 234567899999999999999999999999999999
Q ss_pred EEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEe-----CCCCcEEEeeccccc
Q 048430 754 IMQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLL-----DDDMVAHLGDFGIAK 828 (973)
Q Consensus 754 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill-----~~~~~~kl~Dfgla~ 828 (973)
||||+++ +|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||++ +.++.+||+|||+++
T Consensus 111 v~e~~~~-~L~~~~~~~~-~~~~~~~~~i~~ql~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~ 185 (329)
T 3gbz_A 111 IFEYAEN-DLKKYMDKNP-DVSMRVIKSFLYQLINGVNFCH---SRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLAR 185 (329)
T ss_dssp EEECCSE-EHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHH
T ss_pred EEecCCC-CHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCEECCCCCHHHEEEecCCCCccceEEECcCCCcc
Confidence 9999975 9999998765 6999999999999999999999 7899999999999999 455569999999998
Q ss_pred ccCCCCCcccccccccccccCccCCCCC-CCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhC-Cc-c-hh
Q 048430 829 LLDGVDPVTQTMTLATIGYMAPEYGSEG-IVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESL-PG-A-VT 904 (973)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~-~~-~-~~ 904 (973)
..... ........+|+.|+|||.+.+. .++.++|||||||++|||++|+.||......+ .+........ +. . +.
T Consensus 186 ~~~~~-~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~ 263 (329)
T 3gbz_A 186 AFGIP-IRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEID-QLFKIFEVLGLPDDTTWP 263 (329)
T ss_dssp HHC------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCTTTST
T ss_pred ccCCc-ccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHH-HHHHHHHHhCCCchhhhh
Confidence 76432 2223345689999999987764 58999999999999999999999986532211 1222222111 11 0 00
Q ss_pred hhcc-cccCCCC--chhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 905 EVVD-ANLLSRE--DEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 905 ~~~d-~~l~~~~--~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
.... +...... ..........+..+++++.+++.+||+.||++|||++|+++|
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 319 (329)
T 3gbz_A 264 GVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEH 319 (329)
T ss_dssp TGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred hhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCC
Confidence 0000 0000000 000001111122356778999999999999999999999975
No 191
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=9.3e-38 Score=348.28 Aligned_cols=276 Identities=23% Similarity=0.280 Sum_probs=202.2
Q ss_pred HHHhcCCCCCccccccCceEEEEEEeC-CCeEEEEEEEeccch-----hhHHHHHHHHHHHHhccCCceeEEEeeeecCC
Q 048430 676 QQATNGFGESNLLGSGSFDNVYKATLA-NGVSVAVKVFNLQED-----RALKSFDTECEVMRRIRHRNLIKIVSSCSNPG 749 (973)
Q Consensus 676 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 749 (973)
....++|...+.||+|+||.||+|+.. +|+.||||+++.... ...+.+.+|+.++++++||||+++++++.+.+
T Consensus 6 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 85 (346)
T 1ua2_A 6 KSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKS 85 (346)
T ss_dssp -------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTT
T ss_pred HHHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCC
Confidence 345578999999999999999999964 689999999865322 11346889999999999999999999999999
Q ss_pred eeEEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccc
Q 048430 750 FKALIMQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKL 829 (973)
Q Consensus 750 ~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~ 829 (973)
..++||||+++ +|.+++......+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 86 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~ 161 (346)
T 1ua2_A 86 NISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLH---QHWILHRDLKPNNLLLDENGVLKLADFGLAKS 161 (346)
T ss_dssp CCEEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECCCGGGST
T ss_pred ceEEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHH---HCCEECCCCCHHHEEEcCCCCEEEEeccccee
Confidence 99999999986 899999887667999999999999999999999 78999999999999999999999999999987
Q ss_pred cCCCCCcccccccccccccCccCCCC-CCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCC---cchhh
Q 048430 830 LDGVDPVTQTMTLATIGYMAPEYGSE-GIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLP---GAVTE 905 (973)
Q Consensus 830 ~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~---~~~~~ 905 (973)
..... .......+|+.|+|||.+.+ ..++.++|||||||++|||++|..||...... ..+......... ..+.+
T Consensus 162 ~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~ 239 (346)
T 1ua2_A 162 FGSPN-RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDL-DQLTRIFETLGTPTEEQWPD 239 (346)
T ss_dssp TTSCC-CCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCCCCTTTSSS
T ss_pred ccCCc-ccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHH-HHHHHHHHHcCCCChhhhhh
Confidence 64322 22344578999999998765 45899999999999999999999998653221 112222221111 11111
Q ss_pred hcc-cccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 906 VVD-ANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 906 ~~d-~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
... +...................++.++.+++.+||+.||++|||++|+++|
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 240 MCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp TTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred hccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 000 0000000000000001112345779999999999999999999999986
No 192
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=5.8e-38 Score=362.28 Aligned_cols=249 Identities=24% Similarity=0.273 Sum_probs=196.2
Q ss_pred hcCCCCCccccccCceEEEEEEe-CCCeEEEEEEEecc---chhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEE
Q 048430 679 TNGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQ---EDRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALI 754 (973)
Q Consensus 679 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 754 (973)
.++|...++||+|+||.||+|+. .+++.||||+++.. .......+.+|+++++.++||||+++++++...+..++|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 46788899999999999999985 57899999999754 223346678899999999999999999999999999999
Q ss_pred EEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCC-CCeEEccCCCCcEEeCCCCcEEEeecccccccCCC
Q 048430 755 MQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYS-TPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGV 833 (973)
Q Consensus 755 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~-~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 833 (973)
|||+++|+|.+++.... .+++..+..++.||+.||+||| + .+|+||||||+|||++.++.+||+|||+++.....
T Consensus 227 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 302 (446)
T 4ejn_A 227 MEYANGGELFFHLSRER-VFSEDRARFYGAEIVSALDYLH---SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD 302 (446)
T ss_dssp ECCCSSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC-
T ss_pred EeeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHh---hcCCEEECCCCHHHEEECCCCCEEEccCCCceeccCC
Confidence 99999999999998765 7999999999999999999999 6 89999999999999999999999999999864322
Q ss_pred CCcccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhcccccCC
Q 048430 834 DPVTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLLS 913 (973)
Q Consensus 834 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 913 (973)
........||+.|+|||.+.+..++.++|||||||++|||++|+.||..... ......+.. ....
T Consensus 303 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--~~~~~~i~~-----------~~~~- 367 (446)
T 4ejn_A 303 -GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--EKLFELILM-----------EEIR- 367 (446)
T ss_dssp -----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHH-----------CCCC-
T ss_pred -CcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCH--HHHHHHHHh-----------CCCC-
Confidence 2223446799999999999888999999999999999999999999865321 111111110 0000
Q ss_pred CCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCC-----CHHHHHHH
Q 048430 914 REDEEDADDFATKKTCISYIMSLALKCSAEIPEERI-----NVKDALAD 957 (973)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rp-----t~~evl~~ 957 (973)
.+..+++++.+++.+||+.||++|| +++|+++|
T Consensus 368 -----------~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~h 405 (446)
T 4ejn_A 368 -----------FPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQH 405 (446)
T ss_dssp -----------CCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred -----------CCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhC
Confidence 0112356688999999999999999 99999976
No 193
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=9.4e-38 Score=373.52 Aligned_cols=251 Identities=24% Similarity=0.352 Sum_probs=201.8
Q ss_pred ccccccCceEEEEEEe---CCCeEEEEEEEeccc--hhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEEEEecCC
Q 048430 686 NLLGSGSFDNVYKATL---ANGVSVAVKVFNLQE--DRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALIMQYMPQ 760 (973)
Q Consensus 686 ~~lg~G~~g~Vy~~~~---~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 760 (973)
+.||+|+||.||+|.+ ..++.||||+++... ....+.+.+|+.++++++||||+++++++.. +..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 4799999999999964 356889999997543 2345789999999999999999999999965 457899999999
Q ss_pred CCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCCCCc--cc
Q 048430 761 GSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGVDPV--TQ 838 (973)
Q Consensus 761 gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~--~~ 838 (973)
|+|.+++.... .+++.++..++.||+.||+||| +.+||||||||+||+++.++.+||+|||+++........ ..
T Consensus 454 g~L~~~l~~~~-~l~~~~~~~i~~qi~~~L~yLH---~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 529 (635)
T 4fl3_A 454 GPLNKYLQQNR-HVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 529 (635)
T ss_dssp EEHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC--------
T ss_pred CCHHHHHhhCC-CCCHHHHHHHHHHHHHHHHHHH---HCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccccc
Confidence 99999998765 7999999999999999999999 789999999999999999999999999999876433221 22
Q ss_pred ccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCccccCcccHHHHHHhhCCcchhhhcccccCCCCch
Q 048430 839 TMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFT-RRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLLSREDE 917 (973)
Q Consensus 839 ~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 917 (973)
....+|+.|+|||.+....++.++|||||||++|||++ |+.||...... .+...+... ..
T Consensus 530 ~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~--~~~~~i~~~------------~~----- 590 (635)
T 4fl3_A 530 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS--EVTAMLEKG------------ER----- 590 (635)
T ss_dssp -----CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--HHHHHHHTT------------CC-----
T ss_pred cCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcC------------CC-----
Confidence 33457789999999988899999999999999999998 99998653221 111111110 00
Q ss_pred hhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHHHH
Q 048430 918 EDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIKKIL 965 (973)
Q Consensus 918 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~~~~ 965 (973)
...+..++.++.+++.+||+.||++||+++++++.|+++...+
T Consensus 591 -----~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~l 633 (635)
T 4fl3_A 591 -----MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDV 633 (635)
T ss_dssp -----CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred -----CCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHHh
Confidence 0111235677999999999999999999999999999987654
No 194
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=4.6e-37 Score=344.70 Aligned_cols=258 Identities=22% Similarity=0.362 Sum_probs=207.6
Q ss_pred HHHHHHhcCCCCCccccccCceEEEEEEeC-CCeEEEEEEEeccc--------hhhHHHHHHHHHHHHhc-cCCceeEEE
Q 048430 673 HELQQATNGFGESNLLGSGSFDNVYKATLA-NGVSVAVKVFNLQE--------DRALKSFDTECEVMRRI-RHRNLIKIV 742 (973)
Q Consensus 673 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--------~~~~~~~~~e~~~l~~l-~h~niv~l~ 742 (973)
.......++|...+.||+|+||.||+|+.. +|+.||||+++... ....+.+.+|+.+++++ +||||++++
T Consensus 87 ~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~ 166 (365)
T 2y7j_A 87 AAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLI 166 (365)
T ss_dssp HHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEE
T ss_pred hhhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEE
Confidence 344455678999999999999999999975 79999999987543 12246788999999999 799999999
Q ss_pred eeeecCCeeEEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEe
Q 048430 743 SSCSNPGFKALIMQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLG 822 (973)
Q Consensus 743 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~ 822 (973)
+++...+..++||||+++++|.+++.... .+++..+..++.||+.||.||| +.+|+||||||+||+++.++.+||+
T Consensus 167 ~~~~~~~~~~lv~e~~~g~~L~~~l~~~~-~l~~~~~~~i~~qi~~~L~~LH---~~gi~H~Dlkp~NIl~~~~~~ikl~ 242 (365)
T 2y7j_A 167 DSYESSSFMFLVFDLMRKGELFDYLTEKV-ALSEKETRSIMRSLLEAVSFLH---ANNIVHRDLKPENILLDDNMQIRLS 242 (365)
T ss_dssp EEEEBSSEEEEEECCCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEEC
T ss_pred EEEeeCCEEEEEEEeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEEE
Confidence 99999999999999999999999998654 6999999999999999999999 7899999999999999999999999
Q ss_pred ecccccccCCCCCcccccccccccccCccCCC------CCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHH
Q 048430 823 DFGIAKLLDGVDPVTQTMTLATIGYMAPEYGS------EGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVA 896 (973)
Q Consensus 823 Dfgla~~~~~~~~~~~~~~~~~~~y~aPE~~~------~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~ 896 (973)
|||++....... ......||+.|+|||++. ...++.++|||||||++|||++|+.||..... ......+.
T Consensus 243 DfG~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~--~~~~~~i~ 318 (365)
T 2y7j_A 243 DFGFSCHLEPGE--KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQ--ILMLRMIM 318 (365)
T ss_dssp CCTTCEECCTTC--CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHH
T ss_pred ecCcccccCCCc--ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCH--HHHHHHHH
Confidence 999998765322 233457999999999764 34688999999999999999999999865211 11111111
Q ss_pred hhCCcchhhhcccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 897 ESLPGAVTEVVDANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 897 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
... .. . .......++..+.+++.+||+.||++||+++|+++|
T Consensus 319 ~~~-----------~~--~------~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 360 (365)
T 2y7j_A 319 EGQ-----------YQ--F------SSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQH 360 (365)
T ss_dssp HTC-----------CC--C------CHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred hCC-----------CC--C------CCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 100 00 0 001111245668999999999999999999999985
No 195
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=1.4e-37 Score=359.09 Aligned_cols=269 Identities=22% Similarity=0.200 Sum_probs=198.1
Q ss_pred hcCCCCCccccccCceEEEEEEe-CCCeEEEEEEEecc--chhhHHHHHHHHHHHHhccCCceeEEEeeeecC------C
Q 048430 679 TNGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQ--EDRALKSFDTECEVMRRIRHRNLIKIVSSCSNP------G 749 (973)
Q Consensus 679 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~ 749 (973)
.++|...+.||+|+||.||+|.. .+++.||||++... .....+.+.+|+.+++.++||||+++++++... .
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 46788999999999999999985 46899999999754 334467888999999999999999999998654 4
Q ss_pred eeEEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccc
Q 048430 750 FKALIMQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKL 829 (973)
Q Consensus 750 ~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~ 829 (973)
..++||||+++ ++.+.+.. .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 141 ~~~lv~E~~~~-~l~~~~~~---~l~~~~~~~~~~qil~aL~~lH---~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~ 213 (464)
T 3ttj_A 141 DVYLVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART 213 (464)
T ss_dssp EEEEEEECCSE-EHHHHHTS---CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCCCC--
T ss_pred eEEEEEeCCCC-CHHHHHhh---cCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChHhEEEeCCCCEEEEEEEeeee
Confidence 67999999976 57776653 4899999999999999999999 78999999999999999999999999999987
Q ss_pred cCCCCCcccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCc--------
Q 048430 830 LDGVDPVTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPG-------- 901 (973)
Q Consensus 830 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~-------- 901 (973)
.... ......+||+.|+|||.+.+..++.++||||+||++|||++|+.||.+.... ..+...+......
T Consensus 214 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~-~~~~~i~~~lg~p~~~~~~~~ 290 (464)
T 3ttj_A 214 AGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYI-DQWNKVIEQLGTPCPEFMKKL 290 (464)
T ss_dssp ---C--CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCSCCHHHHTTS
T ss_pred cCCC--cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHhcCCCCHHHHHHc
Confidence 6432 2334567999999999999999999999999999999999999999653211 1111111111100
Q ss_pred --chhhhccccc--CCCCchhh------hhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 902 --AVTEVVDANL--LSREDEED------ADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 902 --~~~~~~d~~l--~~~~~~~~------~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
.....++... ........ ...........+++.+++.+||+.||++|||++|+++|
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 356 (464)
T 3ttj_A 291 QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356 (464)
T ss_dssp CHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred chhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0000000000 00000000 00011122346779999999999999999999999987
No 196
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=3.5e-37 Score=333.66 Aligned_cols=251 Identities=23% Similarity=0.317 Sum_probs=202.8
Q ss_pred cCCCCCccccccCceEEEEEEeC-CCeEEEEEEEeccch------hhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeE
Q 048430 680 NGFGESNLLGSGSFDNVYKATLA-NGVSVAVKVFNLQED------RALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKA 752 (973)
Q Consensus 680 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 752 (973)
++|...+.||+|+||.||+|+.. +++.||+|+++.... ...+.+.+|+.++++++||||+++++++.+.+..+
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 84 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence 46888899999999999999965 689999999875421 13578999999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCC----cEEEeeccccc
Q 048430 753 LIMQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDM----VAHLGDFGIAK 828 (973)
Q Consensus 753 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~----~~kl~Dfgla~ 828 (973)
+||||+++++|.+++.... .+++.++..++.|++.||.||| +.+|+||||||+||+++.++ .+||+|||.+.
T Consensus 85 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~ 160 (283)
T 3bhy_A 85 LILELVSGGELFDFLAEKE-SLTEDEATQFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH 160 (283)
T ss_dssp EEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred EEEeecCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCChHHEEEecCCCCCCceEEEecccce
Confidence 9999999999999997654 6899999999999999999999 78999999999999998877 89999999998
Q ss_pred ccCCCCCcccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhcc
Q 048430 829 LLDGVDPVTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVD 908 (973)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d 908 (973)
...... ......+++.|+|||......++.++||||||+++|||++|+.||...... ..........
T Consensus 161 ~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-----~~~~~~~~~~------ 227 (283)
T 3bhy_A 161 KIEAGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQ-----ETLTNISAVN------ 227 (283)
T ss_dssp ECC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHH-----HHHHHHHTTC------
T ss_pred eccCCC--cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchH-----HHHHHhHhcc------
Confidence 764322 223456899999999998889999999999999999999999998653211 1111100000
Q ss_pred cccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 909 ANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 909 ~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
. ... ......++..+.+++.+||+.||++||++.|+++|
T Consensus 228 --~--~~~------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 266 (283)
T 3bhy_A 228 --Y--DFD------EEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEH 266 (283)
T ss_dssp --C--CCC------HHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHC
T ss_pred --c--CCc------chhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhC
Confidence 0 000 01112345678999999999999999999999986
No 197
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=5.5e-38 Score=351.11 Aligned_cols=264 Identities=13% Similarity=0.116 Sum_probs=206.6
Q ss_pred cCCCCCccccccCceEEEEEEeC---------CCeEEEEEEEeccchhhHHHHHHHHHHHHhccCCceeE----------
Q 048430 680 NGFGESNLLGSGSFDNVYKATLA---------NGVSVAVKVFNLQEDRALKSFDTECEVMRRIRHRNLIK---------- 740 (973)
Q Consensus 680 ~~~~~~~~lg~G~~g~Vy~~~~~---------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~---------- 740 (973)
++|...+.||+|+||.||+|+.. +++.||||++... +.+.+|++++++++||||++
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 116 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPL 116 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTT
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCc
Confidence 57888999999999999999965 3789999998744 46789999999999999987
Q ss_pred -----EEeeeec-CCeeEEEEEecCCCCHHHHhhhC-CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEe
Q 048430 741 -----IVSSCSN-PGFKALIMQYMPQGSLEKWLYSH-NYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLL 813 (973)
Q Consensus 741 -----l~~~~~~-~~~~~lv~e~~~~gsL~~~l~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill 813 (973)
+++++.. .+..++||||+ +++|.+++... ...+++.++..++.||+.||+||| +.+|+||||||+||++
T Consensus 117 ~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dikp~NIl~ 192 (352)
T 2jii_A 117 LAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLH---ENEYVHGNVTAENIFV 192 (352)
T ss_dssp CSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCCGGGEEE
T ss_pred cCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCHHHEEE
Confidence 5666654 78889999999 99999999875 247999999999999999999999 7899999999999999
Q ss_pred CCCC--cEEEeecccccccCCCCC------cccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccc
Q 048430 814 DDDM--VAHLGDFGIAKLLDGVDP------VTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMF 885 (973)
Q Consensus 814 ~~~~--~~kl~Dfgla~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~ 885 (973)
+.++ .+||+|||+++....... .......||+.|+|||...+..++.++|||||||++|||++|+.||....
T Consensus 193 ~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~ 272 (352)
T 2jii_A 193 DPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCL 272 (352)
T ss_dssp ETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGT
T ss_pred cCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCC
Confidence 9998 999999999986543211 11233479999999999998899999999999999999999999997643
Q ss_pred cCcccHHHHHHhhCCcchhhhcccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHHHH
Q 048430 886 TGEMSLKQWVAESLPGAVTEVVDANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIKKIL 965 (973)
Q Consensus 886 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~~~~ 965 (973)
.....+........ .......+.. .....++.++.+++.+||+.||++||+++|+++.|+++.+..
T Consensus 273 ~~~~~~~~~~~~~~-~~~~~~~~~~-------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~ 338 (352)
T 2jii_A 273 PNTEDIMKQKQKFV-DKPGPFVGPC-------------GHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDL 338 (352)
T ss_dssp TCHHHHHHHHHHHH-HSCCCEECTT-------------SCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred cCHHHHHHHHHhcc-CChhhhhhhc-------------cccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhc
Confidence 23222222221110 0000000000 000123566899999999999999999999999999988764
Q ss_pred H
Q 048430 966 T 966 (973)
Q Consensus 966 ~ 966 (973)
.
T Consensus 339 ~ 339 (352)
T 2jii_A 339 R 339 (352)
T ss_dssp T
T ss_pred C
Confidence 3
No 198
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=1.2e-37 Score=337.51 Aligned_cols=250 Identities=25% Similarity=0.328 Sum_probs=197.7
Q ss_pred cCCCCCccccccCceEEEEEEe-CCCeEEEEEEEeccch-hhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEEEEe
Q 048430 680 NGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQED-RALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALIMQY 757 (973)
Q Consensus 680 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 757 (973)
++|...+.||+|+||.||+|+. .+++.||+|++..... ...+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 101 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMET 101 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEe
Confidence 5688889999999999999986 4689999999876542 3457899999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhC---CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEe---CCCCcEEEeecccccccC
Q 048430 758 MPQGSLEKWLYSH---NYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLL---DDDMVAHLGDFGIAKLLD 831 (973)
Q Consensus 758 ~~~gsL~~~l~~~---~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill---~~~~~~kl~Dfgla~~~~ 831 (973)
+++|+|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+||++ +.++.+||+|||++....
T Consensus 102 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~ 178 (285)
T 3is5_A 102 CEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH---SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK 178 (285)
T ss_dssp CSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC--
T ss_pred CCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEEECCCCHHHEEEecCCCCCCEEEEeeecceecC
Confidence 9999999988643 247999999999999999999999 7899999999999999 556889999999998654
Q ss_pred CCCCcccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhccccc
Q 048430 832 GVDPVTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANL 911 (973)
Q Consensus 832 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 911 (973)
.. .......+++.|+|||.+. ..++.++|||||||++|||++|+.||...... ..........+. .
T Consensus 179 ~~--~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~--~~~~~~~~~~~~---------~ 244 (285)
T 3is5_A 179 SD--EHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLE--EVQQKATYKEPN---------Y 244 (285)
T ss_dssp ----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHCCCC---------C
T ss_pred Cc--ccCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHH--HHHhhhccCCcc---------c
Confidence 32 2233456899999999875 56899999999999999999999998653211 111111110000 0
Q ss_pred CCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 912 LSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
... ...+++++.+++.+||+.||++||+++|+++|
T Consensus 245 ~~~-----------~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 279 (285)
T 3is5_A 245 AVE-----------CRPLTPQAVDLLKQMLTKDPERRPSAAQVLHH 279 (285)
T ss_dssp CC-------------CCCCHHHHHHHHHHTCSCTTTSCCHHHHHTS
T ss_pred ccc-----------cCcCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000 00124568899999999999999999999875
No 199
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=2.8e-37 Score=342.45 Aligned_cols=266 Identities=20% Similarity=0.280 Sum_probs=203.4
Q ss_pred cCCCCCccccccCceEEEEEEe-CCCeEEEEEEEeccchhhHHHHHHHHHHHHhcc-CCceeEEEeeeec--CCeeEEEE
Q 048430 680 NGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQEDRALKSFDTECEVMRRIR-HRNLIKIVSSCSN--PGFKALIM 755 (973)
Q Consensus 680 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~--~~~~~lv~ 755 (973)
++|...+.||+|+||.||+|+. .+++.||||+++... .+.+.+|+.++++++ ||||+++++++.+ ....++||
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~ 112 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF 112 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCC---HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccc---hHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEE
Confidence 5688889999999999999985 578999999986433 367899999999997 9999999999987 67789999
Q ss_pred EecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCC-cEEEeecccccccCCCC
Q 048430 756 QYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDM-VAHLGDFGIAKLLDGVD 834 (973)
Q Consensus 756 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~-~~kl~Dfgla~~~~~~~ 834 (973)
||+++++|.+++. .+++.++..++.|++.||+||| +.+|+||||||+||+++.++ .+||+|||+++......
T Consensus 113 e~~~~~~l~~~~~----~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~ 185 (330)
T 3nsz_A 113 EHVNNTDFKQLYQ----TLTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ 185 (330)
T ss_dssp ECCCCCCHHHHGG----GCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTC
T ss_pred eccCchhHHHHHH----hCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCC
Confidence 9999999999986 3789999999999999999999 79999999999999999776 89999999998764322
Q ss_pred CcccccccccccccCccCCCC-CCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhcccccCC
Q 048430 835 PVTQTMTLATIGYMAPEYGSE-GIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLLS 913 (973)
Q Consensus 835 ~~~~~~~~~~~~y~aPE~~~~-~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 913 (973)
......++..|+|||.+.. ..++.++|||||||++|||++|+.||.........+.............+.++..-..
T Consensus 186 --~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 263 (330)
T 3nsz_A 186 --EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE 263 (330)
T ss_dssp --CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCC
T ss_pred --ccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccc
Confidence 2334568999999998776 6789999999999999999999999854332222222222111111111111110000
Q ss_pred -------------CCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 914 -------------REDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 914 -------------~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
............+..+++++.+++.+||+.||++|||++|+++|
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h 320 (330)
T 3nsz_A 264 LDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 320 (330)
T ss_dssp CCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred cccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 00000000111122356789999999999999999999999986
No 200
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=2.1e-37 Score=346.53 Aligned_cols=274 Identities=23% Similarity=0.319 Sum_probs=205.2
Q ss_pred hcCCCCCccccccCceEEEEEEe-CCCeEEEEEEEeccch--hhHHHHHHHHHHHHhccCCceeEEEeeeec--------
Q 048430 679 TNGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQED--RALKSFDTECEVMRRIRHRNLIKIVSSCSN-------- 747 (973)
Q Consensus 679 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-------- 747 (973)
.++|...+.||+|+||.||+|+. .+++.||||++..... .....+.+|+.++++++||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 95 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence 35788899999999999999996 5789999998865432 234678899999999999999999999876
Q ss_pred CCeeEEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccc
Q 048430 748 PGFKALIMQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIA 827 (973)
Q Consensus 748 ~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla 827 (973)
.+..++||||+++ ++.+.+......+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++
T Consensus 96 ~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 171 (351)
T 3mi9_A 96 KGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLA 171 (351)
T ss_dssp -CEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred CceEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCHHHEEEcCCCCEEEccchhc
Confidence 4568999999975 888888876667999999999999999999999 789999999999999999999999999999
Q ss_pred cccCCCC---CcccccccccccccCccCCCC-CCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhh--CCc
Q 048430 828 KLLDGVD---PVTQTMTLATIGYMAPEYGSE-GIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAES--LPG 901 (973)
Q Consensus 828 ~~~~~~~---~~~~~~~~~~~~y~aPE~~~~-~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~--~~~ 901 (973)
+...... ........||+.|+|||.+.+ ..++.++|||||||++|||++|+.||......+ ......... .+.
T Consensus 172 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~i~~~~~~~~~ 250 (351)
T 3mi9_A 172 RAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQH-QLALISQLCGSITP 250 (351)
T ss_dssp EECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCT
T ss_pred ccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCCh
Confidence 8764222 122344578999999997765 558999999999999999999999987632211 111111111 111
Q ss_pred c-hhhhcccccCCC-----CchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 902 A-VTEVVDANLLSR-----EDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 902 ~-~~~~~d~~l~~~-----~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
. +....+...... ...............++++.+++.+||+.||++|||++|+++|
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 312 (351)
T 3mi9_A 251 EVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 312 (351)
T ss_dssp TTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence 1 111111111000 0000111111112235678999999999999999999999986
No 201
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=1.4e-37 Score=337.00 Aligned_cols=256 Identities=24% Similarity=0.389 Sum_probs=205.2
Q ss_pred HhcCCCCCccccccCceEEEEEEeC-CCeEEEEEEEeccchhhHHHHHHHHHHHHhccCCceeEEEeeeec---------
Q 048430 678 ATNGFGESNLLGSGSFDNVYKATLA-NGVSVAVKVFNLQEDRALKSFDTECEVMRRIRHRNLIKIVSSCSN--------- 747 (973)
Q Consensus 678 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--------- 747 (973)
...+|...+.||+|+||.||+|+.. +++.||+|+++... +.+.+|++++++++||||+++++++..
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 84 (284)
T 2a19_B 9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSS 84 (284)
T ss_dssp HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-----
T ss_pred hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccc
Confidence 3456888999999999999999975 79999999987553 356789999999999999999998753
Q ss_pred -------CCeeEEEEEecCCCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcE
Q 048430 748 -------PGFKALIMQYMPQGSLEKWLYSHN-YSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVA 819 (973)
Q Consensus 748 -------~~~~~lv~e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~ 819 (973)
....++||||+++++|.+++.... ..+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+
T Consensus 85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~ 161 (284)
T 2a19_B 85 KNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQV 161 (284)
T ss_dssp ----CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEE
T ss_pred ccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCCHHHEEEcCCCCE
Confidence 445799999999999999997643 47999999999999999999999 7899999999999999999999
Q ss_pred EEeecccccccCCCCCcccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhC
Q 048430 820 HLGDFGIAKLLDGVDPVTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESL 899 (973)
Q Consensus 820 kl~Dfgla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 899 (973)
||+|||++....... ......+++.|+|||...+..++.++|||||||++|||++|..|+... ..+....
T Consensus 162 kl~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~-------~~~~~~~- 231 (284)
T 2a19_B 162 KIGDFGLVTSLKNDG--KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET-------SKFFTDL- 231 (284)
T ss_dssp EECCCTTCEESSCCS--CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH-------HHHHHHH-
T ss_pred EECcchhheeccccc--cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH-------HHHHHHh-
Confidence 999999998765322 223446899999999988888999999999999999999999886321 1111110
Q ss_pred CcchhhhcccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHHHHHhhccc
Q 048430 900 PGAVTEVVDANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIKKILTQALHL 971 (973)
Q Consensus 900 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~~~~~~~~~~ 971 (973)
.+..+. ..++..+.+++.+||+.||++||++.|++++|+.+.+......+.
T Consensus 232 -------~~~~~~--------------~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~~~~~~ 282 (284)
T 2a19_B 232 -------RDGIIS--------------DIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPEKNERH 282 (284)
T ss_dssp -------HTTCCC--------------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC--------
T ss_pred -------hccccc--------------ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCCccccc
Confidence 000000 113455789999999999999999999999999998876665543
No 202
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=2.9e-37 Score=338.03 Aligned_cols=251 Identities=24% Similarity=0.334 Sum_probs=203.1
Q ss_pred hcCCCCCccccccCceEEEEEEeC-CCeEEEEEEEeccchhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEEEEe
Q 048430 679 TNGFGESNLLGSGSFDNVYKATLA-NGVSVAVKVFNLQEDRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALIMQY 757 (973)
Q Consensus 679 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 757 (973)
.++|...+.||+|+||.||+|+.. +|+.||+|+++.......+.+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQL 87 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEc
Confidence 456888999999999999999964 7899999999866544456788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEe---CCCCcEEEeecccccccCCCC
Q 048430 758 MPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLL---DDDMVAHLGDFGIAKLLDGVD 834 (973)
Q Consensus 758 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill---~~~~~~kl~Dfgla~~~~~~~ 834 (973)
+++++|.+++.... .+++..+..++.|++.||.||| +.+|+||||||+||++ +.++.+||+|||++.....
T Consensus 88 ~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~-- 161 (304)
T 2jam_A 88 VSGGELFDRILERG-VYTEKDASLVIQQVLSAVKYLH---ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQN-- 161 (304)
T ss_dssp CCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCC--
T ss_pred CCCccHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCC--
Confidence 99999999997654 6899999999999999999999 7899999999999999 7889999999999875432
Q ss_pred CcccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhcccccCCC
Q 048430 835 PVTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLLSR 914 (973)
Q Consensus 835 ~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 914 (973)
.......|++.|+|||...+..++.++||||+||++|||++|+.||...... .....+.... . ..
T Consensus 162 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~i~~~~-----------~-~~ 226 (304)
T 2jam_A 162 -GIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETES--KLFEKIKEGY-----------Y-EF 226 (304)
T ss_dssp -BTTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHH--HHHHHHHHCC-----------C-CC
T ss_pred -CccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH--HHHHHHHcCC-----------C-CC
Confidence 2223446899999999999999999999999999999999999998653211 1111111100 0 00
Q ss_pred CchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 915 EDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
.. .....++.++.+++.+||+.||++||+++|+++|
T Consensus 227 ~~-------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (304)
T 2jam_A 227 ES-------PFWDDISESAKDFICHLLEKDPNERYTCEKALSH 262 (304)
T ss_dssp CT-------TTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred Cc-------cccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 00 0011245678999999999999999999999986
No 203
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=2e-37 Score=348.29 Aligned_cols=276 Identities=20% Similarity=0.216 Sum_probs=205.4
Q ss_pred HHHHHHHhcCCCCCccccccCceEEEEEEeCCCeEEEEEEEeccc-----------hhhHHHHHHHHHHHHhccCCceeE
Q 048430 672 YHELQQATNGFGESNLLGSGSFDNVYKATLANGVSVAVKVFNLQE-----------DRALKSFDTECEVMRRIRHRNLIK 740 (973)
Q Consensus 672 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-----------~~~~~~~~~e~~~l~~l~h~niv~ 740 (973)
..++....++|...+.||+|+||.||+|...+++.||||++.... ....+.+.+|++++++++||||++
T Consensus 14 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~ 93 (362)
T 3pg1_A 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILG 93 (362)
T ss_dssp HHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred HHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccc
Confidence 467788889999999999999999999998889999999885432 122478999999999999999999
Q ss_pred EEeeee-----cCCeeEEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCC
Q 048430 741 IVSSCS-----NPGFKALIMQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDD 815 (973)
Q Consensus 741 l~~~~~-----~~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~ 815 (973)
+++++. .....++||||++ |+|.+++......+++..+..++.|++.||.||| +.+|+||||||+||+++.
T Consensus 94 ~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~~ 169 (362)
T 3pg1_A 94 LRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLH---EAGVVHRDLHPGNILLAD 169 (362)
T ss_dssp CSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECT
T ss_pred eeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCcCEecCCChHHEEEcC
Confidence 999983 3446899999997 6999999877668999999999999999999999 789999999999999999
Q ss_pred CCcEEEeecccccccCCCCCcccccccccccccCccCCCC-CCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHH
Q 048430 816 DMVAHLGDFGIAKLLDGVDPVTQTMTLATIGYMAPEYGSE-GIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQW 894 (973)
Q Consensus 816 ~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~ 894 (973)
++.+||+|||+++.... ........+|+.|+|||.+.+ ..++.++|||||||++|||++|+.||...... ..+...
T Consensus 170 ~~~~kl~Dfg~~~~~~~--~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-~~~~~i 246 (362)
T 3pg1_A 170 NNDITICDFNLAREDTA--DANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFY-NQLNKI 246 (362)
T ss_dssp TCCEEECCTTC-----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHH
T ss_pred CCCEEEEecCccccccc--ccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHH-HHHHHH
Confidence 99999999999975432 222344578999999998766 67899999999999999999999999753211 111222
Q ss_pred HHhhCCcch-----------hhhcccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 895 VAESLPGAV-----------TEVVDANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 895 ~~~~~~~~~-----------~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
+........ .+.......... ..........+++.+.+++.+||+.||++|||++|+++|
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 317 (362)
T 3pg1_A 247 VEVVGTPKIEDVVMFSSPSARDYLRNSLSNVP---ARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH 317 (362)
T ss_dssp HHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCC---CCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHHcCCCChHHhhhccchhhhHHHHhhcccCC---hhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence 211111111 111111111100 001111222346778999999999999999999999986
No 204
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=4.4e-37 Score=334.17 Aligned_cols=247 Identities=26% Similarity=0.377 Sum_probs=198.4
Q ss_pred CCCCCccccccCceEEEEEEe-CCCeEEEEEEEeccc--hhhHHHHHHHHHHHHhccCCceeEEEeeeec----CCeeEE
Q 048430 681 GFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQE--DRALKSFDTECEVMRRIRHRNLIKIVSSCSN----PGFKAL 753 (973)
Q Consensus 681 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~~l 753 (973)
.|...+.||+|+||.||+|.. .++..||+|++.... ....+.+.+|+.++++++||||+++++++.. ....++
T Consensus 27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 106 (290)
T 1t4h_A 27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL 106 (290)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEE
T ss_pred eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEE
Confidence 356677899999999999985 568899999987543 3446788999999999999999999998754 456899
Q ss_pred EEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCC--eEEccCCCCcEEeC-CCCcEEEeeccccccc
Q 048430 754 IMQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTP--IIHCDLKPNNVLLD-DDMVAHLGDFGIAKLL 830 (973)
Q Consensus 754 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~--ivH~dlk~~Nill~-~~~~~kl~Dfgla~~~ 830 (973)
||||+++++|.+++.... .+++..+..++.|++.||.||| +.+ |+||||||+||+++ .++.+||+|||++...
T Consensus 107 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~ 182 (290)
T 1t4h_A 107 VTELMTSGTLKTYLKRFK-VMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK 182 (290)
T ss_dssp EEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGC
T ss_pred EEEecCCCCHHHHHHHcc-CCCHHHHHHHHHHHHHHHHHHH---cCCCCEEECCCCHHHEEEECCCCCEEEeeCCCcccc
Confidence 999999999999998754 6899999999999999999999 777 99999999999997 7899999999999765
Q ss_pred CCCCCcccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhcccc
Q 048430 831 DGVDPVTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDAN 910 (973)
Q Consensus 831 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 910 (973)
... ......|++.|+|||.+. +.++.++||||+||++|||++|+.||..... ..........+....
T Consensus 183 ~~~---~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~----~~~~~~~~~~~~~~~----- 249 (290)
T 1t4h_A 183 RAS---FAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQN----AAQIYRRVTSGVKPA----- 249 (290)
T ss_dssp CTT---SBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSS----HHHHHHHHTTTCCCG-----
T ss_pred ccc---ccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCc----HHHHHHHHhccCCcc-----
Confidence 322 223456899999999776 4589999999999999999999999865322 222222111111000
Q ss_pred cCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 911 LLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 911 l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
..+..+++++.+++.+||+.||++||+++|+++|
T Consensus 250 -------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 283 (290)
T 1t4h_A 250 -------------SFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp -------------GGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred -------------ccCCCCCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 0011224568899999999999999999999976
No 205
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.7e-36 Score=354.16 Aligned_cols=164 Identities=20% Similarity=0.221 Sum_probs=98.5
Q ss_pred CCCCCcccEEEeecCccccccCcccCCCCCCCEEEccCCcCCCCCchhhhccCcCCeeecCCccccCcCcccccCcCCCC
Q 048430 367 FGNLSNLLVLSLVNNELAGAIPTVLGKLQKLQGLDLNSNKLKGFIPTDLCKLEKLNTLLSNNNALQGQIPTCLANLTSLR 446 (973)
Q Consensus 367 ~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~ 446 (973)
|..+++|+.|++++|.+.+..+..|..+++|++|++++|.+.+.+|.. +....+|+
T Consensus 172 l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~------------------------~~~~~~L~ 227 (477)
T 2id5_A 172 LSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPN------------------------CLYGLNLT 227 (477)
T ss_dssp HTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTT------------------------TTTTCCCS
T ss_pred hcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcc------------------------cccCcccc
Confidence 334455555555555555555555555555555555555544444433 33334555
Q ss_pred eeeccCCCCCCCCcccccccccccEEEecCCcccCCcCcCccCCCCCCeEEccCCcCcccCCcccccCCcCCEEEcccCc
Q 048430 447 HLDFRSNSLNSTIPSTFWSLKYILAVDFSLNSLSGSLPLNIGNLEALGGLNLTGNQLSGYIPSSIGNLKNLDWLALARNA 526 (973)
Q Consensus 447 ~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 526 (973)
+|++++|++++..+..|..+++|+.|++++|++++..+..|.++++|+.|+|++|++++..|..|..+++|+.|+|++|+
T Consensus 228 ~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~ 307 (477)
T 2id5_A 228 SLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQ 307 (477)
T ss_dssp EEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSC
T ss_pred EEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCc
Confidence 55565555554444455556666666666666665555556666666777777777766666666667777777777777
Q ss_pred cccCCCCCcccccccccccccccccCCC
Q 048430 527 FQGPIPQSFGSLISLQSLDLSGNNISGE 554 (973)
Q Consensus 527 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 554 (973)
|++..+..|..+++|+.|+|++|.+++.
T Consensus 308 l~~~~~~~~~~l~~L~~L~l~~N~l~c~ 335 (477)
T 2id5_A 308 LTTLEESVFHSVGNLETLILDSNPLACD 335 (477)
T ss_dssp CSCCCGGGBSCGGGCCEEECCSSCEECS
T ss_pred CceeCHhHcCCCcccCEEEccCCCccCc
Confidence 7655555666677777777777776643
No 206
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6.6e-38 Score=350.32 Aligned_cols=255 Identities=23% Similarity=0.278 Sum_probs=204.0
Q ss_pred hcCCCCCccccccCceEEEEEEe----CCCeEEEEEEEeccc----hhhHHHHHHHHHHHHhc-cCCceeEEEeeeecCC
Q 048430 679 TNGFGESNLLGSGSFDNVYKATL----ANGVSVAVKVFNLQE----DRALKSFDTECEVMRRI-RHRNLIKIVSSCSNPG 749 (973)
Q Consensus 679 ~~~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~ 749 (973)
.++|...++||+|+||.||+|+. .+++.||||+++... ....+.+.+|+.+++++ +||||+++++++...+
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 35788899999999999999986 478999999986432 22345677899999999 6999999999999999
Q ss_pred eeEEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccc
Q 048430 750 FKALIMQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKL 829 (973)
Q Consensus 750 ~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~ 829 (973)
..++||||+++|+|.+++.... .+++..+..++.||+.||.||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~ 208 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQRE-RFTEHEVQIYVGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKE 208 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEESCSSEEEE
T ss_pred eEEEEeecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCcEEEeeCCCCee
Confidence 9999999999999999998754 6999999999999999999999 78999999999999999999999999999987
Q ss_pred cCCCCCcccccccccccccCccCCCC--CCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhc
Q 048430 830 LDGVDPVTQTMTLATIGYMAPEYGSE--GIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVV 907 (973)
Q Consensus 830 ~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (973)
.............||+.|+|||.+.+ ..++.++|||||||++|||++|+.||....... ....+.......
T Consensus 209 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~-~~~~~~~~~~~~------ 281 (355)
T 1vzo_A 209 FVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKN-SQAEISRRILKS------ 281 (355)
T ss_dssp CCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCC-CHHHHHHHHHHC------
T ss_pred cccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccc-hHHHHHHHHhcc------
Confidence 64333333344579999999998775 357899999999999999999999996532221 122221111000
Q ss_pred ccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCC-----CHHHHHHHH
Q 048430 908 DANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERI-----NVKDALADL 958 (973)
Q Consensus 908 d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rp-----t~~evl~~L 958 (973)
.+ ..+..++..+.+++.+||+.||++|| +++|+++|.
T Consensus 282 ~~--------------~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~ 323 (355)
T 1vzo_A 282 EP--------------PYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL 323 (355)
T ss_dssp CC--------------CCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSG
T ss_pred CC--------------CCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCc
Confidence 00 00112345688999999999999999 999999875
No 207
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=4.7e-37 Score=334.89 Aligned_cols=252 Identities=27% Similarity=0.422 Sum_probs=199.7
Q ss_pred cCCCCCccccccCceEEEEEEe-CCCeEEEEEEEeccchhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEEEEec
Q 048430 680 NGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQEDRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALIMQYM 758 (973)
Q Consensus 680 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 758 (973)
++|....+||+|+||.||+|.. .+++.||||.+........+.+.+|+.+++.++||||+++++++...+..++||||+
T Consensus 22 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 101 (295)
T 2clq_A 22 DENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQV 101 (295)
T ss_dssp CTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred cCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeC
Confidence 3455567999999999999995 578899999998766666678999999999999999999999999999999999999
Q ss_pred CCCCHHHHhhhCC--CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCC-CCcEEEeecccccccCCCCC
Q 048430 759 PQGSLEKWLYSHN--YSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDD-DMVAHLGDFGIAKLLDGVDP 835 (973)
Q Consensus 759 ~~gsL~~~l~~~~--~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~-~~~~kl~Dfgla~~~~~~~~ 835 (973)
++++|.+++.... ..+++..+..++.|++.||+||| +.+|+||||||+||+++. ++.+||+|||.+........
T Consensus 102 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~ 178 (295)
T 2clq_A 102 PGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP 178 (295)
T ss_dssp SEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC---
T ss_pred CCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHH---hCCEEccCCChhhEEEECCCCCEEEeecccccccCCCCC
Confidence 9999999998753 34678899999999999999999 789999999999999987 89999999999987643221
Q ss_pred cccccccccccccCccCCCCC--CCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhcccccCC
Q 048430 836 VTQTMTLATIGYMAPEYGSEG--IVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLLS 913 (973)
Q Consensus 836 ~~~~~~~~~~~y~aPE~~~~~--~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 913 (973)
......|++.|+|||..... .++.++||||||+++|||++|+.||................. ..+.
T Consensus 179 -~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~--------~~~~--- 246 (295)
T 2clq_A 179 -CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFK--------VHPE--- 246 (295)
T ss_dssp ---CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHC--------CCCC---
T ss_pred -cccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhcccc--------cccc---
Confidence 22345689999999987654 378999999999999999999999864322111110000000 0000
Q ss_pred CCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 914 REDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
.+..++.++.+++.+||+.||++||+++|+++|
T Consensus 247 -----------~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~ 279 (295)
T 2clq_A 247 -----------IPESMSAEAKAFILKCFEPDPDKRACANDLLVD 279 (295)
T ss_dssp -----------CCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHTS
T ss_pred -----------ccccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 011245668899999999999999999999875
No 208
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=9.2e-38 Score=345.70 Aligned_cols=257 Identities=26% Similarity=0.461 Sum_probs=204.9
Q ss_pred cCCCCCccccccCceEEEEEEe-CCCeEE--EEEEEeccc-hhhHHHHHHHHHHHHhc-cCCceeEEEeeeecCCeeEEE
Q 048430 680 NGFGESNLLGSGSFDNVYKATL-ANGVSV--AVKVFNLQE-DRALKSFDTECEVMRRI-RHRNLIKIVSSCSNPGFKALI 754 (973)
Q Consensus 680 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~v--avK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv 754 (973)
++|...+.||+|+||.||+|+. .++..+ |+|.++... ....+.+.+|+++++++ +||||+++++++.+.+..++|
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 104 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 104 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence 5678889999999999999985 456654 999886532 33456789999999999 899999999999999999999
Q ss_pred EEecCCCCHHHHhhhCC---------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcE
Q 048430 755 MQYMPQGSLEKWLYSHN---------------YSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVA 819 (973)
Q Consensus 755 ~e~~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~ 819 (973)
|||+++|+|.+++.... ..+++.+++.++.|++.||+||| +.+|+||||||+||+++.++.+
T Consensus 105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~~~~~ 181 (327)
T 1fvr_A 105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVA 181 (327)
T ss_dssp ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGGGCE
T ss_pred EecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCccceEEEcCCCeE
Confidence 99999999999998653 36899999999999999999999 7999999999999999999999
Q ss_pred EEeecccccccCCCCCcccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCccccCcccHHHHHHhh
Q 048430 820 HLGDFGIAKLLDGVDPVTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFT-RRKPTNEMFTGEMSLKQWVAES 898 (973)
Q Consensus 820 kl~Dfgla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~ 898 (973)
||+|||+++.... ........+++.|+|||......++.++|||||||++|||++ |+.||..... .......
T Consensus 182 kL~Dfg~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~-----~~~~~~~ 254 (327)
T 1fvr_A 182 KIADFGLSRGQEV--YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC-----AELYEKL 254 (327)
T ss_dssp EECCTTCEESSCE--ECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCH-----HHHHHHG
T ss_pred EEcccCcCccccc--cccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcH-----HHHHHHh
Confidence 9999999874321 112233457889999999888889999999999999999998 9999865321 1111111
Q ss_pred CCcchhhhcccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHHHH
Q 048430 899 LPGAVTEVVDANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIKKIL 965 (973)
Q Consensus 899 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~~~~ 965 (973)
..+ ... ..+..+++++.+++.+||+.+|++||+++|++++|+++.+..
T Consensus 255 ~~~---------~~~----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 302 (327)
T 1fvr_A 255 PQG---------YRL----------EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEER 302 (327)
T ss_dssp GGT---------CCC----------CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred hcC---------CCC----------CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhh
Confidence 100 000 011134567899999999999999999999999999987654
No 209
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=1.3e-37 Score=344.42 Aligned_cols=261 Identities=24% Similarity=0.378 Sum_probs=206.7
Q ss_pred hcCCCCCccccccCceEEEEEEe------CCCeEEEEEEEecc-chhhHHHHHHHHHHHHhccCCceeEEEeeeecCCee
Q 048430 679 TNGFGESNLLGSGSFDNVYKATL------ANGVSVAVKVFNLQ-EDRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFK 751 (973)
Q Consensus 679 ~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 751 (973)
.++|...+.||+|+||.||+|+. .+++.||||++... .......+.+|+.++++++||||+++++++.+.+..
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 108 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 108 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCc
Confidence 46788899999999999999983 35778999998644 234456789999999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHhhhCC------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCC---CCcEEEe
Q 048430 752 ALIMQYMPQGSLEKWLYSHN------YSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDD---DMVAHLG 822 (973)
Q Consensus 752 ~lv~e~~~~gsL~~~l~~~~------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~---~~~~kl~ 822 (973)
++||||+++++|.+++.... ..+++.+++.++.|++.||.||| +.+|+||||||+||+++. +..+||+
T Consensus 109 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~i~H~dlkp~NIli~~~~~~~~~kl~ 185 (327)
T 2yfx_A 109 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIG 185 (327)
T ss_dssp EEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHh---hCCeecCcCCHhHEEEecCCCcceEEEC
Confidence 99999999999999998754 35899999999999999999999 789999999999999984 4569999
Q ss_pred ecccccccCCCCC-cccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCccccCcccHHHHHHhhCC
Q 048430 823 DFGIAKLLDGVDP-VTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFT-RRKPTNEMFTGEMSLKQWVAESLP 900 (973)
Q Consensus 823 Dfgla~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 900 (973)
|||++........ .......+++.|+|||.+....++.++|||||||++|||++ |+.||..... ......+.....
T Consensus 186 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~--~~~~~~~~~~~~ 263 (327)
T 2yfx_A 186 DFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN--QEVLEFVTSGGR 263 (327)
T ss_dssp CCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH--HHHHHHHHTTCC
T ss_pred ccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCH--HHHHHHHhcCCC
Confidence 9999976533222 12234567899999999888889999999999999999998 8899865321 111111111000
Q ss_pred cchhhhcccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHHHHH
Q 048430 901 GAVTEVVDANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIKKILT 966 (973)
Q Consensus 901 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~~~~~ 966 (973)
. ..+..++..+.+++.+||+.||++||++.|++++|+.+.+...
T Consensus 264 ------------~----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~~~ 307 (327)
T 2yfx_A 264 ------------M----------DPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPD 307 (327)
T ss_dssp ------------C----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCHH
T ss_pred ------------C----------CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcCHH
Confidence 0 0011345678899999999999999999999999999876543
No 210
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=1.5e-37 Score=344.66 Aligned_cols=254 Identities=21% Similarity=0.305 Sum_probs=201.6
Q ss_pred HhcCCCCCccccccCceEEEEEEeC-CCeEEEEEEEeccchhhHHHHHHHHHHHHhc-cCCceeEEEeeeecCCeeEEEE
Q 048430 678 ATNGFGESNLLGSGSFDNVYKATLA-NGVSVAVKVFNLQEDRALKSFDTECEVMRRI-RHRNLIKIVSSCSNPGFKALIM 755 (973)
Q Consensus 678 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 755 (973)
..++|...+.||+|+||.||+|... +++.||||+++.... ...+|++++.++ +||||+++++++.+.+..++||
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ 95 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVT 95 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEE
T ss_pred ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEE
Confidence 3467888999999999999999864 689999999975532 245688888887 7999999999999999999999
Q ss_pred EecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCC----CcEEEeecccccccC
Q 048430 756 QYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDD----MVAHLGDFGIAKLLD 831 (973)
Q Consensus 756 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~----~~~kl~Dfgla~~~~ 831 (973)
||+++|+|.+++.... .+++.++..++.||+.||+||| +.+|+||||||+||++..+ +.+||+|||+++...
T Consensus 96 E~~~gg~L~~~i~~~~-~~~~~~~~~~~~qi~~al~~lH---~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~ 171 (342)
T 2qr7_A 96 ELMKGGELLDKILRQK-FFSEREASAVLFTITKTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLR 171 (342)
T ss_dssp CCCCSCBHHHHHHTCT-TCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECB
T ss_pred eCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCc
Confidence 9999999999998765 6999999999999999999999 7899999999999998543 359999999998764
Q ss_pred CCCCcccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhccccc
Q 048430 832 GVDPVTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANL 911 (973)
Q Consensus 832 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 911 (973)
... .......||+.|+|||.+.+..++.++|||||||++|||++|+.||..... ............+. .
T Consensus 172 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--~~~~~~~~~i~~~~--------~ 240 (342)
T 2qr7_A 172 AEN-GLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPD--DTPEEILARIGSGK--------F 240 (342)
T ss_dssp CTT-CCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTT--SCHHHHHHHHHHCC--------C
T ss_pred CCC-CceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCc--CCHHHHHHHHccCC--------c
Confidence 332 223345789999999988877789999999999999999999999975321 12222211111000 0
Q ss_pred CCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 048430 912 LSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADL 958 (973)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L 958 (973)
.... ..+..+++++.+++.+||+.||++||++.|+++|=
T Consensus 241 ~~~~--------~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~hp 279 (342)
T 2qr7_A 241 SLSG--------GYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHP 279 (342)
T ss_dssp CCCS--------TTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSH
T ss_pred ccCc--------cccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCC
Confidence 0000 00112456788999999999999999999999873
No 211
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=7.4e-38 Score=337.98 Aligned_cols=252 Identities=28% Similarity=0.407 Sum_probs=199.0
Q ss_pred hcCCCCCccccccCceEEEEEEeCCCeEEEEEEEeccchhhHHHHHHHHHHHHhccCCceeEEEeeeec-CCeeEEEEEe
Q 048430 679 TNGFGESNLLGSGSFDNVYKATLANGVSVAVKVFNLQEDRALKSFDTECEVMRRIRHRNLIKIVSSCSN-PGFKALIMQY 757 (973)
Q Consensus 679 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~~~lv~e~ 757 (973)
.++|...+.||+|+||.||+|+.. ++.||||+++... ..+.+.+|+.++++++||||+++++++.+ .+..++||||
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~ 96 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 96 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECC
T ss_pred hhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEec
Confidence 457888899999999999999875 8999999986543 44779999999999999999999998754 4578999999
Q ss_pred cCCCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCCCCc
Q 048430 758 MPQGSLEKWLYSHN-YSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGVDPV 836 (973)
Q Consensus 758 ~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 836 (973)
+++++|.+++.... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++......
T Consensus 97 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~--- 170 (278)
T 1byg_A 97 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST--- 170 (278)
T ss_dssp CTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTSCEEECCCCC----------
T ss_pred CCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHH---hCCccccCCCcceEEEeCCCcEEEeecccccccccc---
Confidence 99999999998653 23789999999999999999999 789999999999999999999999999998765322
Q ss_pred ccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCccccCcccHHHHHHhhCCcchhhhcccccCCCC
Q 048430 837 TQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFT-RRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLLSRE 915 (973)
Q Consensus 837 ~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 915 (973)
.....+++.|+|||...+..++.++||||||+++|||++ |+.||...... .....+. .+ ..
T Consensus 171 -~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~--~~~~~~~---~~---------~~--- 232 (278)
T 1byg_A 171 -QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK--DVVPRVE---KG---------YK--- 232 (278)
T ss_dssp ------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGG--GHHHHHT---TT---------CC---
T ss_pred -ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHh---cC---------CC---
Confidence 123357889999999888889999999999999999998 99998653221 1111110 00 00
Q ss_pred chhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHHH
Q 048430 916 DEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIKKI 964 (973)
Q Consensus 916 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~~~ 964 (973)
...+..+++.+.+++.+||+.||++||++.|+++.|++++..
T Consensus 233 -------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~ 274 (278)
T 1byg_A 233 -------MDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTH 274 (278)
T ss_dssp -------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred -------CCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhh
Confidence 001123456789999999999999999999999999988753
No 212
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=4.8e-37 Score=352.64 Aligned_cols=199 Identities=24% Similarity=0.313 Sum_probs=168.1
Q ss_pred hcCCCCCccccccCceEEEEEEe-CCCeEEEEEEEecc--chhhHHHHHHHHHHHHhccCCceeEEEeeeecC-----Ce
Q 048430 679 TNGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQ--EDRALKSFDTECEVMRRIRHRNLIKIVSSCSNP-----GF 750 (973)
Q Consensus 679 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~ 750 (973)
.++|...+.||+|+||.||+|+. .+++.||||+++.. .....+.+.+|++++++++||||+++++++... ..
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 46788999999999999999985 46899999999653 234457889999999999999999999998765 57
Q ss_pred eEEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeeccccccc
Q 048430 751 KALIMQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLL 830 (973)
Q Consensus 751 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~ 830 (973)
.|+||||++ |+|.+++.... .+++..+..++.||++||+||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 105 ~~lv~e~~~-~~L~~~~~~~~-~l~~~~~~~i~~qil~aL~~LH---~~givHrDlkp~NILl~~~~~~kL~DFGla~~~ 179 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLFKTPI-FLTEEHIKTILYNLLLGENFIH---ESGIIHRDLKPANCLLNQDCSVKVCDFGLARTI 179 (432)
T ss_dssp EEEEEECCS-EEHHHHHHSSC-CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEEecCC-cCHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCCCCCCCCHHHeEECCCCCEEEccCCCcccc
Confidence 899999996 59999998754 6999999999999999999999 789999999999999999999999999999876
Q ss_pred CCCCCc---------------------ccccccccccccCccCC-CCCCCCcchhHHHHHHHHHHHHhCCCCCC
Q 048430 831 DGVDPV---------------------TQTMTLATIGYMAPEYG-SEGIVSISGDVYSFGILMMETFTRRKPTN 882 (973)
Q Consensus 831 ~~~~~~---------------------~~~~~~~~~~y~aPE~~-~~~~~~~~sDvws~Gvvl~elltg~~p~~ 882 (973)
...... .....+||+.|+|||.+ ....++.++||||+||++|||++|..||.
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 180 NSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp -------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred cccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 432211 12456799999999974 56679999999999999999998766654
No 213
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=2.4e-37 Score=347.82 Aligned_cols=253 Identities=17% Similarity=0.136 Sum_probs=205.0
Q ss_pred HhcCCCCCccccccCceEEEEEE------eCCCeEEEEEEEeccchhhHHHHHHHHHHHHhcc---CCceeEEEeeeecC
Q 048430 678 ATNGFGESNLLGSGSFDNVYKAT------LANGVSVAVKVFNLQEDRALKSFDTECEVMRRIR---HRNLIKIVSSCSNP 748 (973)
Q Consensus 678 ~~~~~~~~~~lg~G~~g~Vy~~~------~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~l~~~~~~~ 748 (973)
..++|...+.||+|+||.||+|. ..+++.||||+++... ...+.+|++++++++ |+||+++++++...
T Consensus 63 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~ 139 (365)
T 3e7e_A 63 GSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN---PWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQ 139 (365)
T ss_dssp SSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC---HHHHHHHHHHHHHSCGGGGGGBCCEEEEEECS
T ss_pred CCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC---hhHHHHHHHHHHHhhhhhhhhhhhhheeeecC
Confidence 45678888999999999999994 4568999999986543 356788888888886 99999999999999
Q ss_pred CeeEEEEEecCCCCHHHHhhh----CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCC---------
Q 048430 749 GFKALIMQYMPQGSLEKWLYS----HNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDD--------- 815 (973)
Q Consensus 749 ~~~~lv~e~~~~gsL~~~l~~----~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~--------- 815 (973)
+..++||||+++|+|.+++.. ....+++..++.++.||+.||+||| +.+||||||||+|||++.
T Consensus 140 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH---~~~ivHrDiKp~NIll~~~~~~~~~~~ 216 (365)
T 3e7e_A 140 NGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVH---DCEIIHGDIKPDNFILGNGFLEQDDED 216 (365)
T ss_dssp SCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECGGGTCC----
T ss_pred CCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHh---hCCeecCCCCHHHEEecccccCccccc
Confidence 999999999999999999975 2346999999999999999999999 899999999999999998
Q ss_pred --CCcEEEeecccccccCCC-CCcccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHH
Q 048430 816 --DMVAHLGDFGIAKLLDGV-DPVTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLK 892 (973)
Q Consensus 816 --~~~~kl~Dfgla~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~ 892 (973)
++.+||+|||+|+..... .........||+.|+|||.+.+..++.++|||||||++|||++|+.||.....+...
T Consensus 217 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~-- 294 (365)
T 3e7e_A 217 DLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECK-- 294 (365)
T ss_dssp --CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEEE--
T ss_pred cccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCcee--
Confidence 899999999999765321 222344567999999999999989999999999999999999999998543221110
Q ss_pred HHHHhhCCcchhhhcccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCC-CCHHHHHHHHHHHHHHH
Q 048430 893 QWVAESLPGAVTEVVDANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEER-INVKDALADLKKIKKIL 965 (973)
Q Consensus 893 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~R-pt~~evl~~L~~~~~~~ 965 (973)
.+..+... ...+.+.+++..|++.+|.+| |+++++.+.|+++.+..
T Consensus 295 --------------~~~~~~~~-------------~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~~ 341 (365)
T 3e7e_A 295 --------------PEGLFRRL-------------PHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQH 341 (365)
T ss_dssp --------------ECSCCTTC-------------SSHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHHH
T ss_pred --------------echhcccc-------------CcHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHHh
Confidence 00001000 013456789999999999998 57888888888877653
No 214
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=1.6e-37 Score=338.26 Aligned_cols=250 Identities=21% Similarity=0.280 Sum_probs=206.4
Q ss_pred hcCCCCCccccccCceEEEEEEeC-CCeEEEEEEEeccc---hhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEE
Q 048430 679 TNGFGESNLLGSGSFDNVYKATLA-NGVSVAVKVFNLQE---DRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALI 754 (973)
Q Consensus 679 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 754 (973)
.++|...+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 93 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 93 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence 356888899999999999999965 68899999987542 34457789999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCCC
Q 048430 755 MQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGVD 834 (973)
Q Consensus 755 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 834 (973)
|||+++++|.+++.... .+++.++..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||.+.......
T Consensus 94 ~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~ 169 (294)
T 2rku_A 94 LELCRRRSLLELHKRRK-ALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 169 (294)
T ss_dssp EECCTTCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred EecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEcCCCCEEEEeccCceecccCc
Confidence 99999999999987754 6899999999999999999999 7899999999999999999999999999998764322
Q ss_pred CcccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhcccccCCC
Q 048430 835 PVTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLLSR 914 (973)
Q Consensus 835 ~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 914 (973)
.......|++.|+|||...+..++.++||||||+++|||++|+.||...... ......... ...
T Consensus 170 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-----~~~~~~~~~--------~~~-- 233 (294)
T 2rku_A 170 -ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK-----ETYLRIKKN--------EYS-- 233 (294)
T ss_dssp -CCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHH-----HHHHHHHTT--------CCC--
T ss_pred -cccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHHhhc--------cCC--
Confidence 2233456899999999998888999999999999999999999998653211 111110000 000
Q ss_pred CchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 048430 915 EDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADL 958 (973)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L 958 (973)
.+..++..+.+++.+||+.||++||+++|++++-
T Consensus 234 ----------~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~~ 267 (294)
T 2rku_A 234 ----------IPKHINPVAASLIQKMLQTDPTARPTINELLNDE 267 (294)
T ss_dssp ----------CCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSH
T ss_pred ----------CccccCHHHHHHHHHHcccChhhCcCHHHHhhCh
Confidence 0112345688999999999999999999999873
No 215
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=1.9e-37 Score=343.73 Aligned_cols=273 Identities=23% Similarity=0.282 Sum_probs=202.6
Q ss_pred hcCCCCCccccccCceEEEEEEeC-CCeEEEEEEEeccc--hhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEEE
Q 048430 679 TNGFGESNLLGSGSFDNVYKATLA-NGVSVAVKVFNLQE--DRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALIM 755 (973)
Q Consensus 679 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 755 (973)
.++|...+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 103 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVF 103 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEE
Confidence 356888899999999999999965 58999999986543 233567889999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCCCC
Q 048430 756 QYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGVDP 835 (973)
Q Consensus 756 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 835 (973)
||+++++|.++..... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++......
T Consensus 104 e~~~~~~l~~~~~~~~-~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~- 178 (331)
T 4aaa_A 104 EFVDHTILDDLELFPN-GLDYQVVQKYLFQIINGIGFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG- 178 (331)
T ss_dssp ECCSEEHHHHHHHSTT-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCTTC--------
T ss_pred ecCCcchHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHH---HCCEEccCcChheEEEcCCCcEEEEeCCCceeecCCc-
Confidence 9999988888766544 6999999999999999999999 7899999999999999999999999999998654322
Q ss_pred cccccccccccccCccCCCCC-CCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhC--Ccchhhhcccc--
Q 048430 836 VTQTMTLATIGYMAPEYGSEG-IVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESL--PGAVTEVVDAN-- 910 (973)
Q Consensus 836 ~~~~~~~~~~~y~aPE~~~~~-~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~d~~-- 910 (973)
.......+++.|+|||.+.+. .++.++||||+||++|||++|+.||......+ .+........ ...........
T Consensus 179 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (331)
T 4aaa_A 179 EVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDID-QLYHIMMCLGNLIPRHQELFNKNPV 257 (331)
T ss_dssp -----CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCSCCHHHHHHHHHCGG
T ss_pred cccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHH-HHHHHHHHhCCCChhhhhHhhhccc
Confidence 223345689999999987765 78999999999999999999999986532211 1111111110 00000000000
Q ss_pred ---cCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 911 ---LLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 911 ---l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
..................+++++.+++.+||+.||++|||++|+++|
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 307 (331)
T 4aaa_A 258 FAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH 307 (331)
T ss_dssp GTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred cccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 00000000001111122457789999999999999999999999987
No 216
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=3e-37 Score=357.95 Aligned_cols=194 Identities=23% Similarity=0.322 Sum_probs=154.9
Q ss_pred hcCCCCCccccccCceEEEEEEe-CCCeEEEEEEEecc--chhhHHHHHHHHHHHHhccCCceeEEEeeeec-----CCe
Q 048430 679 TNGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQ--EDRALKSFDTECEVMRRIRHRNLIKIVSSCSN-----PGF 750 (973)
Q Consensus 679 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-----~~~ 750 (973)
.++|...++||+|+||.||+|+. .+++.||||++... .....+.+.+|+.++++++||||+++++++.. ...
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 131 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE 131 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence 36789999999999999999985 47899999998643 23445788999999999999999999999843 367
Q ss_pred eEEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeeccccccc
Q 048430 751 KALIMQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLL 830 (973)
Q Consensus 751 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~ 830 (973)
.|+||||+ +++|.+++.... .+++..+..++.||+.||+||| +.+||||||||+|||++.++.+||+|||+++..
T Consensus 132 ~~lv~e~~-~~~L~~~~~~~~-~l~~~~~~~~~~qi~~aL~~LH---~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~ 206 (458)
T 3rp9_A 132 LYVVLEIA-DSDFKKLFRTPV-YLTELHIKTLLYNLLVGVKYVH---SAGILHRDLKPANCLVNQDCSVKVCDFGLARTV 206 (458)
T ss_dssp EEEEECCC-SEEHHHHHHSSC-CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTCCEEECCCTTCBCT
T ss_pred EEEEEecc-ccchhhhcccCC-CCCHHHHHHHHHHHHHHHHHHH---hCCcCCCCCChhhEEECCCCCEeecccccchhc
Confidence 89999998 469999998754 7999999999999999999999 789999999999999999999999999999876
Q ss_pred CCCCC--------------------------cccccccccccccCccCC-CCCCCCcchhHHHHHHHHHHHHhC
Q 048430 831 DGVDP--------------------------VTQTMTLATIGYMAPEYG-SEGIVSISGDVYSFGILMMETFTR 877 (973)
Q Consensus 831 ~~~~~--------------------------~~~~~~~~~~~y~aPE~~-~~~~~~~~sDvws~Gvvl~elltg 877 (973)
..... ......+||+.|+|||.+ ....++.++|||||||++|||++|
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 207 DYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp TSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred cCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 42211 122345789999999965 566799999999999999999994
No 217
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=8.2e-37 Score=352.42 Aligned_cols=263 Identities=19% Similarity=0.212 Sum_probs=210.4
Q ss_pred hcCCCCCccccccCceEEEEEEe-CCCeEEEEEEEeccchhhHHHHHHHHHHHHhccC-CceeEEEeeeecCCeeEEEEE
Q 048430 679 TNGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQEDRALKSFDTECEVMRRIRH-RNLIKIVSSCSNPGFKALIMQ 756 (973)
Q Consensus 679 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h-~niv~l~~~~~~~~~~~lv~e 756 (973)
.++|...++||+|+||.||+|+. .+++.||||++...... ..+.+|+++++.++| +++..+..++...+..++|||
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~--~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme 83 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH--PQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMD 83 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS--CCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccccc--HHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEE
Confidence 46789999999999999999995 57999999988755432 457899999999986 566667777788889999999
Q ss_pred ecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEe---CCCCcEEEeecccccccCCC
Q 048430 757 YMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLL---DDDMVAHLGDFGIAKLLDGV 833 (973)
Q Consensus 757 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill---~~~~~~kl~Dfgla~~~~~~ 833 (973)
|+ +++|.+++......+++.+++.|+.||+.||+||| +.+||||||||+|||+ +.++.+||+|||+++.....
T Consensus 84 ~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH---~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (483)
T 3sv0_A 84 LL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH---SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDT 159 (483)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred CC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCC
Confidence 99 89999999876668999999999999999999999 7899999999999999 68899999999999876543
Q ss_pred CCc------ccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhc
Q 048430 834 DPV------TQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVV 907 (973)
Q Consensus 834 ~~~------~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (973)
... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||........ .+.+...........
T Consensus 160 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~--~~~~~~i~~~~~~~~- 236 (483)
T 3sv0_A 160 STHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTK--KQKYEKISEKKVATS- 236 (483)
T ss_dssp TTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSH--HHHHHHHHHHHHHSC-
T ss_pred ccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhH--HHHHHHHhhcccccc-
Confidence 321 12245799999999999999999999999999999999999999976433221 111111000000000
Q ss_pred ccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHHH
Q 048430 908 DANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIKKI 964 (973)
Q Consensus 908 d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~~~ 964 (973)
.......++.++.+++..||+.+|++||+++++++.|+++.+.
T Consensus 237 --------------~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~ 279 (483)
T 3sv0_A 237 --------------IEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIR 279 (483)
T ss_dssp --------------HHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred --------------HHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHH
Confidence 0011123567899999999999999999999999999988764
No 218
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=2.5e-37 Score=344.04 Aligned_cols=256 Identities=23% Similarity=0.290 Sum_probs=190.8
Q ss_pred hcCCCCCccccccCceEEEEEEe-CCCeEEEEEEEeccchhhHHHHHHHHHHHHhcc-CCceeEEEeeee--------cC
Q 048430 679 TNGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQEDRALKSFDTECEVMRRIR-HRNLIKIVSSCS--------NP 748 (973)
Q Consensus 679 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~--------~~ 748 (973)
..+|...++||+|+||.||+|+. .+++.||||++........+.+.+|+.+++++. ||||+++++++. ..
T Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~ 106 (337)
T 3ll6_A 27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQ 106 (337)
T ss_dssp TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSS
T ss_pred CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCC
Confidence 34788889999999999999995 478999999987666666778999999999996 999999999983 34
Q ss_pred CeeEEEEEecCCCCHHHHhhh--CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCC--eEEccCCCCcEEeCCCCcEEEeec
Q 048430 749 GFKALIMQYMPQGSLEKWLYS--HNYSLTIRQRLDIMIDVASALEYLHHGYSTP--IIHCDLKPNNVLLDDDMVAHLGDF 824 (973)
Q Consensus 749 ~~~~lv~e~~~~gsL~~~l~~--~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~--ivH~dlk~~Nill~~~~~~kl~Df 824 (973)
...++||||+. |+|.+++.. ....+++.++..++.|++.||+||| +.+ |+||||||+||+++.++.+||+||
T Consensus 107 ~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~~~ivH~Dikp~NIl~~~~~~~kl~Df 182 (337)
T 3ll6_A 107 AEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMH---RQKPPIIHRDLKVENLLLSNQGTIKLCDF 182 (337)
T ss_dssp EEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHH---TSSSCCBCCCCCGGGCEECTTSCEEBCCC
T ss_pred ceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---hCCCCEEEccCCcccEEECCCCCEEEecC
Confidence 56799999996 699998875 3346999999999999999999999 777 999999999999999999999999
Q ss_pred ccccccCCCCCcc-----------cccccccccccCccCC---CCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCccc
Q 048430 825 GIAKLLDGVDPVT-----------QTMTLATIGYMAPEYG---SEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMS 890 (973)
Q Consensus 825 gla~~~~~~~~~~-----------~~~~~~~~~y~aPE~~---~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~ 890 (973)
|+++......... .....+|+.|+|||.+ ....++.++|||||||++|||++|+.||......
T Consensus 183 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~--- 259 (337)
T 3ll6_A 183 GSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKL--- 259 (337)
T ss_dssp TTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC---------
T ss_pred ccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHH---
Confidence 9998765322211 1134589999999987 5667899999999999999999999998642111
Q ss_pred HHHHHHhhCCcchhhhcccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHHHH
Q 048430 891 LKQWVAESLPGAVTEVVDANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIKKIL 965 (973)
Q Consensus 891 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~~~~ 965 (973)
.... ....... ...++..+.+++.+||+.||++||+++|++++|+.+.+..
T Consensus 260 --~~~~------------~~~~~~~----------~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~ 310 (337)
T 3ll6_A 260 --RIVN------------GKYSIPP----------HDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAAR 310 (337)
T ss_dssp --------------------CCCCT----------TCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred --Hhhc------------CcccCCc----------ccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhcc
Confidence 0000 0000000 0112234778999999999999999999999999988653
No 219
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=2.1e-37 Score=360.37 Aligned_cols=253 Identities=22% Similarity=0.300 Sum_probs=205.8
Q ss_pred cCCCCCccccccCceEEEEEEeC-CCeEEEEEEEeccc---hhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEEE
Q 048430 680 NGFGESNLLGSGSFDNVYKATLA-NGVSVAVKVFNLQE---DRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALIM 755 (973)
Q Consensus 680 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 755 (973)
++|...++||+|+||.||+|+.. +|+.||||++.... ....+.+.+|+.++++++||||+++++++...+..|+||
T Consensus 185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVm 264 (543)
T 3c4z_A 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVM 264 (543)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEE
Confidence 56788899999999999999964 69999999997543 233567889999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhCC---CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCC
Q 048430 756 QYMPQGSLEKWLYSHN---YSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDG 832 (973)
Q Consensus 756 e~~~~gsL~~~l~~~~---~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~ 832 (973)
||+++|+|.+++.... ..+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 265 E~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH---~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~ 341 (543)
T 3c4z_A 265 TIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKA 341 (543)
T ss_dssp CCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHH---HcCCcccCCChHHEEEeCCCCEEEeecceeeeccC
Confidence 9999999999997643 46999999999999999999999 79999999999999999999999999999987643
Q ss_pred CCCcccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhcccccC
Q 048430 833 VDPVTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLL 912 (973)
Q Consensus 833 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 912 (973)
... .....+||+.|+|||.+.+..++.++|||||||++|||++|+.||....... .......... .....
T Consensus 342 ~~~-~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~-~~~~~~~~i~--------~~~~~ 411 (543)
T 3c4z_A 342 GQT-KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV-ENKELKQRVL--------EQAVT 411 (543)
T ss_dssp TCC-CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCC-CHHHHHHHHH--------HCCCC
T ss_pred CCc-ccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccch-hHHHHHHHHh--------hcccC
Confidence 222 2234579999999999999899999999999999999999999997643211 1112111110 00000
Q ss_pred CCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCH-----HHHHHH
Q 048430 913 SREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINV-----KDALAD 957 (973)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~-----~evl~~ 957 (973)
.+..++.++.+++.+||+.||++||++ +|+++|
T Consensus 412 ------------~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~H 449 (543)
T 3c4z_A 412 ------------YPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTH 449 (543)
T ss_dssp ------------CCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTS
T ss_pred ------------CCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHcC
Confidence 012245678899999999999999965 677654
No 220
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=2.3e-37 Score=335.28 Aligned_cols=247 Identities=23% Similarity=0.330 Sum_probs=205.0
Q ss_pred hcCCCCCccccccCceEEEEEEeC-CCeEEEEEEEeccc---hhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEE
Q 048430 679 TNGFGESNLLGSGSFDNVYKATLA-NGVSVAVKVFNLQE---DRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALI 754 (973)
Q Consensus 679 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 754 (973)
.++|...+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 92 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLM 92 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEE
Confidence 357888899999999999999864 68899999986542 22346789999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCCC
Q 048430 755 MQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGVD 834 (973)
Q Consensus 755 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 834 (973)
|||+++|+|.+++.... .+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++......
T Consensus 93 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~- 167 (284)
T 2vgo_A 93 LEFAPRGELYKELQKHG-RFDEQRSATFMEELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSL- 167 (284)
T ss_dssp ECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECTTCCEEECCCTTCEECSSS-
T ss_pred EEeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEEcCCCCEEEecccccccCccc-
Confidence 99999999999998765 6899999999999999999999 899999999999999999999999999998765422
Q ss_pred CcccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhcccccCCC
Q 048430 835 PVTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLLSR 914 (973)
Q Consensus 835 ~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 914 (973)
......|++.|+|||...+..++.++||||||+++|||++|+.||...... ...... ......
T Consensus 168 --~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-----~~~~~~--------~~~~~~-- 230 (284)
T 2vgo_A 168 --RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHT-----ETHRRI--------VNVDLK-- 230 (284)
T ss_dssp --CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH-----HHHHHH--------HTTCCC--
T ss_pred --ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHh-----HHHHHH--------hccccC--
Confidence 223456899999999999889999999999999999999999998653211 111110 000000
Q ss_pred CchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 915 EDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
.+..++.++.+++.+|++.||++||+++|+++|
T Consensus 231 ----------~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h 263 (284)
T 2vgo_A 231 ----------FPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEH 263 (284)
T ss_dssp ----------CCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTC
T ss_pred ----------CCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhhC
Confidence 011234568899999999999999999999986
No 221
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=2.1e-37 Score=336.72 Aligned_cols=251 Identities=25% Similarity=0.291 Sum_probs=188.4
Q ss_pred hcCCCCCccccccCceEEEEEEe-CCCeEEEEEEEeccc--hhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEEE
Q 048430 679 TNGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQE--DRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALIM 755 (973)
Q Consensus 679 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 755 (973)
.++|...+.||+|+||.||+|+. .+++.||||+++... ....+.+.++...++.++||||+++++++.+++..++||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 85 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 85 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence 46788899999999999999996 579999999987542 222344455556678889999999999999999999999
Q ss_pred EecCCCCHHHHhhh---CCCCCCHHHHHHHHHHHHHHHHHhhhcCCC-CeEEccCCCCcEEeCCCCcEEEeecccccccC
Q 048430 756 QYMPQGSLEKWLYS---HNYSLTIRQRLDIMIDVASALEYLHHGYST-PIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLD 831 (973)
Q Consensus 756 e~~~~gsL~~~l~~---~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~-~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~ 831 (973)
||+++ +|.+++.. ....+++..+..++.|++.||+||| +. +|+||||||+||+++.++.+||+|||++....
T Consensus 86 e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 161 (290)
T 3fme_A 86 ELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH---SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLV 161 (290)
T ss_dssp ECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HHSCCCCCCCSGGGCEECTTCCEEBCCC-------
T ss_pred ehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeecCCccccc
Confidence 99974 88887764 3457999999999999999999999 66 99999999999999999999999999998664
Q ss_pred CCCCcccccccccccccCccCC----CCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhc
Q 048430 832 GVDPVTQTMTLATIGYMAPEYG----SEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVV 907 (973)
Q Consensus 832 ~~~~~~~~~~~~~~~y~aPE~~----~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (973)
.. .......||+.|+|||.+ ....++.++|||||||++|||++|+.||.........+...+....+..
T Consensus 162 ~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~----- 234 (290)
T 3fme_A 162 DD--VAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQL----- 234 (290)
T ss_dssp ----------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCCCC-----
T ss_pred cc--ccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhccCCCCc-----
Confidence 32 223334689999999984 5667899999999999999999999999753222222222211111000
Q ss_pred ccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 908 DANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 908 d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
....++.++.+++.+||+.||++|||++|+++|
T Consensus 235 -----------------~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~h 267 (290)
T 3fme_A 235 -----------------PADKFSAEFVDFTSQCLKKNSKERPTYPELMQH 267 (290)
T ss_dssp -----------------CTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred -----------------ccccCCHHHHHHHHHHhhcChhhCcCHHHHHhC
Confidence 001235668899999999999999999999986
No 222
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=1.4e-37 Score=349.19 Aligned_cols=264 Identities=23% Similarity=0.309 Sum_probs=205.2
Q ss_pred cCCCCCccccccCceEEEEEEeC-CCeEEEEEEEeccc-hhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEEEEe
Q 048430 680 NGFGESNLLGSGSFDNVYKATLA-NGVSVAVKVFNLQE-DRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALIMQY 757 (973)
Q Consensus 680 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 757 (973)
++|...+.||+|+||.||+|+.. +++.||+|+++... ....+.+.+|+.++++++||||+++++++...+..++||||
T Consensus 33 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 112 (360)
T 3eqc_A 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 112 (360)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred ccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEEC
Confidence 56888899999999999999965 78999999987653 34457899999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCC-CeEEccCCCCcEEeCCCCcEEEeecccccccCCCCCc
Q 048430 758 MPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYST-PIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGVDPV 836 (973)
Q Consensus 758 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~-~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 836 (973)
+++++|.+++.... .+++..+..++.|++.||+||| +. +|+||||||+||+++.++.+||+|||++..... .
T Consensus 113 ~~~~~L~~~l~~~~-~~~~~~~~~i~~~i~~~l~~lh---~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~---~ 185 (360)
T 3eqc_A 113 MDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYLR---EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID---S 185 (360)
T ss_dssp CTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHH---H
T ss_pred CCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HhCCEEcCCccHHHEEECCCCCEEEEECCCCccccc---c
Confidence 99999999998765 6899999999999999999999 54 899999999999999999999999999875422 1
Q ss_pred ccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCc---------------
Q 048430 837 TQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPG--------------- 901 (973)
Q Consensus 837 ~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~--------------- 901 (973)
......||+.|+|||.+.+..++.++|||||||++|||++|+.||......+ ....+.....+
T Consensus 186 ~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (360)
T 3eqc_A 186 MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE--LELMFGCQVEGDAAETPPRPRTPGRP 263 (360)
T ss_dssp C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHH--HHHHHC--------------------
T ss_pred cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHhcccccccCCCCCCCcccCCCc
Confidence 2233568999999999999899999999999999999999999996532211 11110000000
Q ss_pred ------------chhhhcccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 048430 902 ------------AVTEVVDANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADL 958 (973)
Q Consensus 902 ------------~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L 958 (973)
...+..+....... .......++.++.+++.+||+.||++|||++|+++|-
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp 326 (360)
T 3eqc_A 264 LNKFGMDSRPPMAIFELLDYIVNEPP------PKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHA 326 (360)
T ss_dssp ----------CCCHHHHHHHHHHSCC------CCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSH
T ss_pred ccccccCCCCcccchhhhhHHhccCC------CCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhCh
Confidence 00000000000000 0000112456799999999999999999999999883
No 223
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=1.9e-37 Score=347.04 Aligned_cols=245 Identities=25% Similarity=0.284 Sum_probs=191.7
Q ss_pred hcCCCCCccccccCceEEEEEEeC-CCeEEEEEEEeccc---hhhHHHHHHHHHH-HHhccCCceeEEEeeeecCCeeEE
Q 048430 679 TNGFGESNLLGSGSFDNVYKATLA-NGVSVAVKVFNLQE---DRALKSFDTECEV-MRRIRHRNLIKIVSSCSNPGFKAL 753 (973)
Q Consensus 679 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~-l~~l~h~niv~l~~~~~~~~~~~l 753 (973)
.++|...+.||+|+||.||+|+.. +++.||||+++... ......+.+|..+ ++.++||||+++++++.+.+..|+
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l 116 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF 116 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence 356888999999999999999964 68899999997553 2234556677776 567899999999999999999999
Q ss_pred EEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCC
Q 048430 754 IMQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGV 833 (973)
Q Consensus 754 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 833 (973)
||||+++|+|.+++.... .+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 117 v~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~ 192 (373)
T 2r5t_A 117 VLDYINGGELFYHLQRER-CFLEPRARFYAAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEH 192 (373)
T ss_dssp EEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCC
T ss_pred EEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEECCCCCEEEeeCccccccccC
Confidence 999999999999998754 6899999999999999999999 799999999999999999999999999999864322
Q ss_pred CCcccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhcccccCC
Q 048430 834 DPVTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLLS 913 (973)
Q Consensus 834 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 913 (973)
. ......+||+.|+|||.+.+..++.++|||||||++|||++|+.||..... ...... +....+..
T Consensus 193 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~-----~~~~~~--------i~~~~~~~ 258 (373)
T 2r5t_A 193 N-STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT-----AEMYDN--------ILNKPLQL 258 (373)
T ss_dssp C-CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBH-----HHHHHH--------HHHSCCCC
T ss_pred C-CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH-----HHHHHH--------HHhcccCC
Confidence 2 233446799999999999998999999999999999999999999965321 111111 11110000
Q ss_pred CCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHH
Q 048430 914 REDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKD 953 (973)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~e 953 (973)
+..++.++.+++.+||+.||++||++.+
T Consensus 259 ------------~~~~~~~~~~li~~lL~~dp~~R~~~~~ 286 (373)
T 2r5t_A 259 ------------KPNITNSARHLLEGLLQKDRTKRLGAKD 286 (373)
T ss_dssp ------------CSSSCHHHHHHHHHHTCSSGGGSTTTTT
T ss_pred ------------CCCCCHHHHHHHHHHcccCHHhCCCCCC
Confidence 0123456889999999999999999853
No 224
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=2.7e-37 Score=339.97 Aligned_cols=253 Identities=25% Similarity=0.350 Sum_probs=202.1
Q ss_pred HHhcCCCCCccccccCceEEEEEEeC-CCeEEEEEEEeccchhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEEE
Q 048430 677 QATNGFGESNLLGSGSFDNVYKATLA-NGVSVAVKVFNLQEDRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALIM 755 (973)
Q Consensus 677 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 755 (973)
...++|...+.||+|+||.||+|... +|+.||||++.... ..+.+.+|+.++++++||||+++++++...+..++||
T Consensus 26 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 103 (314)
T 3com_A 26 QPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVM 103 (314)
T ss_dssp ----CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEe
Confidence 34567889999999999999999865 58999999987543 2467899999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCCCC
Q 048430 756 QYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGVDP 835 (973)
Q Consensus 756 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 835 (973)
||+++++|.+++......+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||.+.......
T Consensus 104 e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~- 179 (314)
T 3com_A 104 EYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLH---FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTM- 179 (314)
T ss_dssp ECCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECBTTB-
T ss_pred ecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCCcCCCcCHHHEEECCCCCEEEeecccchhhhhhc-
Confidence 999999999999865557999999999999999999999 7999999999999999999999999999998764322
Q ss_pred cccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhcccccCCCC
Q 048430 836 VTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLLSRE 915 (973)
Q Consensus 836 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 915 (973)
.......+++.|+|||......++.++||||||+++|||++|+.||....... ....+..... ...
T Consensus 180 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~~~~~~~~~--------~~~---- 245 (314)
T 3com_A 180 AKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMR--AIFMIPTNPP--------PTF---- 245 (314)
T ss_dssp SCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHH--HHHHHHHSCC--------CCC----
T ss_pred cccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHH--HHHHHhcCCC--------ccc----
Confidence 22334568999999999988889999999999999999999999986532111 0000000000 000
Q ss_pred chhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 916 DEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 916 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
..+..++..+.+++.+||+.||++||++.|+++|
T Consensus 246 --------~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~ 279 (314)
T 3com_A 246 --------RKPELWSDNFTDFVKQCLVKSPEQRATATQLLQH 279 (314)
T ss_dssp --------SSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred --------CCcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 0112245678999999999999999999999986
No 225
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=6.2e-38 Score=343.10 Aligned_cols=254 Identities=24% Similarity=0.331 Sum_probs=201.1
Q ss_pred HhcCCCCCccccccCceEEEEEEeC-CCeEEEEEEEeccchhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEEEE
Q 048430 678 ATNGFGESNLLGSGSFDNVYKATLA-NGVSVAVKVFNLQEDRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALIMQ 756 (973)
Q Consensus 678 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 756 (973)
..++|...+.||+|+||.||+|+.. +++.||+|++........+.+.+|+.++++++||||+++++++...+..++|||
T Consensus 17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 96 (302)
T 2j7t_A 17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIE 96 (302)
T ss_dssp GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEE
T ss_pred CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEE
Confidence 3467888999999999999999965 689999999876655566889999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCCCCc
Q 048430 757 YMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGVDPV 836 (973)
Q Consensus 757 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 836 (973)
|+++++|.+++......+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++...... ..
T Consensus 97 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-~~ 172 (302)
T 2j7t_A 97 FCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLH---SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKT-LQ 172 (302)
T ss_dssp CCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHH-HH
T ss_pred eCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHHHEEECCCCCEEEEECCCCcccccc-cc
Confidence 99999999999876667999999999999999999999 789999999999999999999999999987543210 11
Q ss_pred ccccccccccccCccCC-----CCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhccccc
Q 048430 837 TQTMTLATIGYMAPEYG-----SEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANL 911 (973)
Q Consensus 837 ~~~~~~~~~~y~aPE~~-----~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 911 (973)
......|++.|+|||.. ....++.++|||||||++|||++|+.||....... ..........+
T Consensus 173 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~~~~----------- 240 (302)
T 2j7t_A 173 KRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMR-VLLKIAKSDPP----------- 240 (302)
T ss_dssp C-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHHHHHHSCCC-----------
T ss_pred ccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHH-HHHHHhccCCc-----------
Confidence 12234689999999976 46778999999999999999999999986532211 01111110000
Q ss_pred CCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 912 LSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
. ...+..++.++.+++.+||+.||++|||+.|+++|
T Consensus 241 -~---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 276 (302)
T 2j7t_A 241 -T---------LLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEH 276 (302)
T ss_dssp -C---------CSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTS
T ss_pred -c---------cCCccccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 0 00112345678999999999999999999999874
No 226
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=3.9e-38 Score=355.63 Aligned_cols=252 Identities=19% Similarity=0.225 Sum_probs=194.8
Q ss_pred hcCCCCCccccccCceEEEEEEe-CCCeEEEEEEEecc---chhhHHHHHHHHH---HHHhccCCceeEEE-------ee
Q 048430 679 TNGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQ---EDRALKSFDTECE---VMRRIRHRNLIKIV-------SS 744 (973)
Q Consensus 679 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~---~l~~l~h~niv~l~-------~~ 744 (973)
.++|...+.||+|+||.||+|+. .+|+.||||++... .....+.+.+|+. .+++++||||++++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 45677889999999999999995 57999999998743 3345678999995 55555899999998 55
Q ss_pred eecCC-----------------eeEEEEEecCCCCHHHHhhhCC------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCe
Q 048430 745 CSNPG-----------------FKALIMQYMPQGSLEKWLYSHN------YSLTIRQRLDIMIDVASALEYLHHGYSTPI 801 (973)
Q Consensus 745 ~~~~~-----------------~~~lv~e~~~~gsL~~~l~~~~------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~i 801 (973)
+..++ ..++||||+ +|+|.+++.... ..+++..+..|+.||+.||+||| +.+|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH---HYGL 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHH---HTTE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHH---hCCe
Confidence 54443 378999999 679999998643 12335888899999999999999 7899
Q ss_pred EEccCCCCcEEeCCCCcEEEeecccccccCCCCCcccccccccccccCccCCCCC-----------CCCcchhHHHHHHH
Q 048430 802 IHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGVDPVTQTMTLATIGYMAPEYGSEG-----------IVSISGDVYSFGIL 870 (973)
Q Consensus 802 vH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-----------~~~~~sDvws~Gvv 870 (973)
+||||||+||+++.++.+||+|||+++.... ......| +.|+|||.+... .++.++|||||||+
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~i 302 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLV 302 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTC----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecCC----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHH
Confidence 9999999999999999999999999986432 2334457 999999988877 79999999999999
Q ss_pred HHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhcccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCC
Q 048430 871 MMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERIN 950 (973)
Q Consensus 871 l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt 950 (973)
+|||++|+.||........ ...+.. . ...+++++.+++.+||+.||++||+
T Consensus 303 l~elltg~~Pf~~~~~~~~-------------~~~~~~-~---------------~~~~~~~~~~li~~~L~~dp~~Rpt 353 (377)
T 3byv_A 303 IYWIWCADLPITKDAALGG-------------SEWIFR-S---------------CKNIPQPVRALLEGFLRYPKEDRLL 353 (377)
T ss_dssp HHHHHHSSCCC------CC-------------SGGGGS-S---------------CCCCCHHHHHHHHHHTCSSGGGCCC
T ss_pred HHHHHHCCCCCcccccccc-------------hhhhhh-h---------------ccCCCHHHHHHHHHHcCCCchhCCC
Confidence 9999999999864321110 000100 0 0123566889999999999999999
Q ss_pred HHHHHHH--HHHHHHHHHhh
Q 048430 951 VKDALAD--LKKIKKILTQA 968 (973)
Q Consensus 951 ~~evl~~--L~~~~~~~~~~ 968 (973)
+.|+++| ++++.+.....
T Consensus 354 ~~e~l~hp~f~~~~~~~~~~ 373 (377)
T 3byv_A 354 PLQAMETPEYEQLRTELSAA 373 (377)
T ss_dssp HHHHHTSHHHHHHHHHHHHH
T ss_pred HHHHhhChHHHHHHHHHHHh
Confidence 9999984 55555555443
No 227
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=1.7e-37 Score=344.47 Aligned_cols=249 Identities=21% Similarity=0.286 Sum_probs=205.8
Q ss_pred hcCCCCCccccccCceEEEEEEeC-CCeEEEEEEEeccc---hhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEE
Q 048430 679 TNGFGESNLLGSGSFDNVYKATLA-NGVSVAVKVFNLQE---DRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALI 754 (973)
Q Consensus 679 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 754 (973)
.++|...+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 119 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 119 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 356888899999999999999964 58899999987542 34467789999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCCC
Q 048430 755 MQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGVD 834 (973)
Q Consensus 755 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 834 (973)
|||+++++|.+++.... .+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++.......
T Consensus 120 ~e~~~~~~L~~~~~~~~-~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 195 (335)
T 2owb_A 120 LELCRRRSLLELHKRRK-ALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 195 (335)
T ss_dssp ECCCTTCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred EecCCCCCHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCCEecCCCchhEEEcCCCCEEEeeccCceecccCc
Confidence 99999999999987754 6999999999999999999999 7899999999999999999999999999998764322
Q ss_pred CcccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhcccccCCC
Q 048430 835 PVTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLLSR 914 (973)
Q Consensus 835 ~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 914 (973)
.......|++.|+|||.+.+..++.++|||||||++|||++|+.||...... ...... ......
T Consensus 196 -~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-----~~~~~~--------~~~~~~-- 259 (335)
T 2owb_A 196 -ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK-----ETYLRI--------KKNEYS-- 259 (335)
T ss_dssp -CCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHH-----HHHHHH--------HHTCCC--
T ss_pred -ccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHH-----HHHHHH--------hcCCCC--
Confidence 2234456899999999988888999999999999999999999998653211 111100 000000
Q ss_pred CchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 915 EDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
.+..++..+.+++.+||+.||++||+++|+++|
T Consensus 260 ----------~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~~ 292 (335)
T 2owb_A 260 ----------IPKHINPVAASLIQKMLQTDPTARPTINELLND 292 (335)
T ss_dssp ----------CCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred ----------CCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 011234568899999999999999999999986
No 228
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=9.4e-37 Score=333.82 Aligned_cols=250 Identities=25% Similarity=0.360 Sum_probs=207.1
Q ss_pred hcCCCCCccccccCceEEEEEEe-CCCeEEEEEEEeccc-hhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEEEE
Q 048430 679 TNGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQE-DRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALIMQ 756 (973)
Q Consensus 679 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 756 (973)
.+.|...+.||+|+||.||+|+. .+++.||||++.... ....+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 100 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME 100 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEE
Confidence 35688889999999999999985 578999999997553 3446789999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCCCCc
Q 048430 757 YMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGVDPV 836 (973)
Q Consensus 757 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 836 (973)
|+++++|.+++... .+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||.+....... .
T Consensus 101 ~~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~-~ 174 (303)
T 3a7i_A 101 YLGGGSALDLLEPG--PLDETQIATILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ-I 174 (303)
T ss_dssp CCTTEEHHHHHTTS--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTB-C
T ss_pred eCCCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCChheEEECCCCCEEEeecccceecCccc-c
Confidence 99999999999764 6899999999999999999999 7899999999999999999999999999998764322 2
Q ss_pred ccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhcccccCCCCc
Q 048430 837 TQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLLSRED 916 (973)
Q Consensus 837 ~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 916 (973)
......|++.|+|||...+..++.++||||||+++|||++|+.||...... .....+..... +.+
T Consensus 175 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~~~~~~~--------~~~----- 239 (303)
T 3a7i_A 175 KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPM--KVLFLIPKNNP--------PTL----- 239 (303)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH--HHHHHHHHSCC--------CCC-----
T ss_pred ccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHH--HHHHHhhcCCC--------CCC-----
Confidence 233456899999999999889999999999999999999999998653211 11111111000 000
Q ss_pred hhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 048430 917 EEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADL 958 (973)
Q Consensus 917 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L 958 (973)
+..++..+.+++.+||+.||++||++.|++++.
T Consensus 240 ---------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~ 272 (303)
T 3a7i_A 240 ---------EGNYSKPLKEFVEACLNKEPSFRPTAKELLKHK 272 (303)
T ss_dssp ---------CSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTCH
T ss_pred ---------ccccCHHHHHHHHHHcCCChhhCcCHHHHhhCh
Confidence 012345688999999999999999999999874
No 229
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=5.6e-37 Score=346.91 Aligned_cols=271 Identities=23% Similarity=0.247 Sum_probs=199.3
Q ss_pred HHHhcCCCCCccccccCceEEEEEEe-CCCeEEEEEEEeccchhhHHHHHHHHHHHHhccCCceeEEEeeeec-------
Q 048430 676 QQATNGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQEDRALKSFDTECEVMRRIRHRNLIKIVSSCSN------- 747 (973)
Q Consensus 676 ~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~------- 747 (973)
+...++|...+.||+|+||.||+|+. .+|+.||||++..... ...+|+.+++.++||||+++++++..
T Consensus 3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~ 78 (383)
T 3eb0_A 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPK 78 (383)
T ss_dssp ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHTTCCCTTBCCEEEEEEEC------
T ss_pred ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc----hHHHHHHHHHHcCCCCccchhheeeecCccccc
Confidence 34567899999999999999999985 5799999999865432 23479999999999999999999843
Q ss_pred -------------------------------CCeeEEEEEecCCCCHHHHhhh---CCCCCCHHHHHHHHHHHHHHHHHh
Q 048430 748 -------------------------------PGFKALIMQYMPQGSLEKWLYS---HNYSLTIRQRLDIMIDVASALEYL 793 (973)
Q Consensus 748 -------------------------------~~~~~lv~e~~~~gsL~~~l~~---~~~~l~~~~~~~i~~~i~~~L~~L 793 (973)
....++||||++ |+|.+.+.. ....+++..+..++.||++||+||
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~L 157 (383)
T 3eb0_A 79 PPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFI 157 (383)
T ss_dssp -------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 334889999998 488777753 335799999999999999999999
Q ss_pred hhcCCCCeEEccCCCCcEEeC-CCCcEEEeecccccccCCCCCcccccccccccccCccCCCCC-CCCcchhHHHHHHHH
Q 048430 794 HHGYSTPIIHCDLKPNNVLLD-DDMVAHLGDFGIAKLLDGVDPVTQTMTLATIGYMAPEYGSEG-IVSISGDVYSFGILM 871 (973)
Q Consensus 794 H~~~~~~ivH~dlk~~Nill~-~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~sDvws~Gvvl 871 (973)
| +.+|+||||||+||+++ .++.+||+|||+++...... ......+|+.|+|||.+.+. .++.++||||+||++
T Consensus 158 H---~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il 232 (383)
T 3eb0_A 158 H---SLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE--PSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVF 232 (383)
T ss_dssp H---TTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS--CCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHH
T ss_pred H---HCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC--CCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHH
Confidence 9 89999999999999997 68899999999998764322 23345689999999987664 589999999999999
Q ss_pred HHHHhCCCCCCccccCcccHHHHHHhhCCcchhh--hcccccCCCCc---hhhhhhHHhHHHHHHHHHHHHHhccccCCC
Q 048430 872 METFTRRKPTNEMFTGEMSLKQWVAESLPGAVTE--VVDANLLSRED---EEDADDFATKKTCISYIMSLALKCSAEIPE 946 (973)
Q Consensus 872 ~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~d~~l~~~~~---~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~ 946 (973)
|||++|+.||...... ..+...+.......... ..++....... ....-....+..++.++.+++.+||+.||+
T Consensus 233 ~ell~g~~pf~~~~~~-~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~ 311 (383)
T 3eb0_A 233 GELILGKPLFSGETSI-DQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPD 311 (383)
T ss_dssp HHHHHSSCSSCCSSHH-HHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGG
T ss_pred HHHHhCCCCCCCCChH-HHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChh
Confidence 9999999999753221 12222222211111111 11111111000 000011112233567799999999999999
Q ss_pred CCCCHHHHHHH
Q 048430 947 ERINVKDALAD 957 (973)
Q Consensus 947 ~Rpt~~evl~~ 957 (973)
+|||+.|+++|
T Consensus 312 ~R~t~~e~l~h 322 (383)
T 3eb0_A 312 LRINPYEAMAH 322 (383)
T ss_dssp GSCCHHHHHTS
T ss_pred hCCCHHHHhcC
Confidence 99999999976
No 230
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=1e-36 Score=355.81 Aligned_cols=251 Identities=22% Similarity=0.310 Sum_probs=203.1
Q ss_pred hcCCCCCccccccCceEEEEEEeC-CCeEEEEEEEeccc--hhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEEE
Q 048430 679 TNGFGESNLLGSGSFDNVYKATLA-NGVSVAVKVFNLQE--DRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALIM 755 (973)
Q Consensus 679 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 755 (973)
.++|...++||+|+||.||+|+.. +++.||||++.... ......+.+|+.++++++||||+++++++.+....++||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 100 (486)
T 3mwu_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG 100 (486)
T ss_dssp HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEE
Confidence 456888999999999999999964 78999999986442 234578899999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeC---CCCcEEEeecccccccCC
Q 048430 756 QYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLD---DDMVAHLGDFGIAKLLDG 832 (973)
Q Consensus 756 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~---~~~~~kl~Dfgla~~~~~ 832 (973)
||+++|+|.+++.... .+++..+..++.||+.||.||| +.+|+||||||+||+++ .++.+||+|||+++....
T Consensus 101 e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 176 (486)
T 3mwu_A 101 ELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ 176 (486)
T ss_dssp CCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCC
T ss_pred EcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCC
Confidence 9999999999887764 6999999999999999999999 78999999999999995 566899999999987643
Q ss_pred CCCcccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhcccccC
Q 048430 833 VDPVTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLL 912 (973)
Q Consensus 833 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 912 (973)
. .......||+.|+|||.+.+ .++.++||||+||++|+|++|+.||...... .....+... ...
T Consensus 177 ~--~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--~~~~~i~~~-----------~~~ 240 (486)
T 3mwu_A 177 N--TKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY--DILKRVETG-----------KYA 240 (486)
T ss_dssp C------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHT-----------CCC
T ss_pred C--CccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHhC-----------CCC
Confidence 2 22334579999999998765 5899999999999999999999998653211 111111110 000
Q ss_pred CCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 913 SREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
. ..+....+++++.+++.+||+.||++|||+.|+++|
T Consensus 241 ~--------~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 241 F--------DLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp S--------CSGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred C--------CCcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0 001112345678999999999999999999999987
No 231
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=3.6e-37 Score=343.01 Aligned_cols=252 Identities=25% Similarity=0.322 Sum_probs=199.4
Q ss_pred HhcCCCCCccccccCceEEEEEEe-CCCeEEEEEEEeccc-hhhHHHHHHHHHH-HHhccCCceeEEEeeeecCCeeEEE
Q 048430 678 ATNGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQE-DRALKSFDTECEV-MRRIRHRNLIKIVSSCSNPGFKALI 754 (973)
Q Consensus 678 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~-l~~l~h~niv~l~~~~~~~~~~~lv 754 (973)
..++|...+.||+|+||.||+|+. .+|+.||||+++... ......+..|..+ ++.++||||+++++++.+.+..++|
T Consensus 49 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv 128 (340)
T 3an0_A 49 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC 128 (340)
T ss_dssp CSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEE
T ss_pred ehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEE
Confidence 346788889999999999999995 579999999987543 2334455566655 7778999999999999999999999
Q ss_pred EEecCCCCHHHHhhh---CCCCCCHHHHHHHHHHHHHHHHHhhhcCCC-CeEEccCCCCcEEeCCCCcEEEeeccccccc
Q 048430 755 MQYMPQGSLEKWLYS---HNYSLTIRQRLDIMIDVASALEYLHHGYST-PIIHCDLKPNNVLLDDDMVAHLGDFGIAKLL 830 (973)
Q Consensus 755 ~e~~~~gsL~~~l~~---~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~-~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~ 830 (973)
|||+++ +|.+++.. ....+++..+..++.||+.||+||| +. +|+||||||+||+++.++.+||+|||+++..
T Consensus 129 ~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH---~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~ 204 (340)
T 3an0_A 129 MELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH---SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYL 204 (340)
T ss_dssp ECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCSCCSTTEEECSTTCEEECCCSHHHHH
T ss_pred HHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeeCCCceec
Confidence 999975 99988874 3457999999999999999999999 55 9999999999999999999999999999876
Q ss_pred CCCCCcccccccccccccCccCCC----CCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhh
Q 048430 831 DGVDPVTQTMTLATIGYMAPEYGS----EGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEV 906 (973)
Q Consensus 831 ~~~~~~~~~~~~~~~~y~aPE~~~----~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 906 (973)
.. ........||+.|+|||.+. ...++.++|||||||++|||++|+.||.........+...+....+
T Consensus 205 ~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~------ 276 (340)
T 3an0_A 205 VD--SVAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSP------ 276 (340)
T ss_dssp SC--HHHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCC------
T ss_pred cc--ccccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchHHHHHHHhcCCCC------
Confidence 42 22233357999999999853 4478999999999999999999999997532221111111111000
Q ss_pred cccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 907 VDANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 907 ~d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
.. ....++.++.+++.+||+.||++||++.|+++|
T Consensus 277 ------~~----------~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 311 (340)
T 3an0_A 277 ------QL----------PADKFSAEFVDFTSQCLKKNSKERPTYPELMQH 311 (340)
T ss_dssp ------CC----------CGGGSCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred ------CC----------CcccCCHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 00 001245678999999999999999999999986
No 232
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=5e-37 Score=339.49 Aligned_cols=262 Identities=19% Similarity=0.251 Sum_probs=205.6
Q ss_pred CCHHHHHHHhcCCCCC-ccccccCceEEEEEEeC-CCeEEEEEEEeccch--hhHHHHHHHHHHHHhcc-CCceeEEEee
Q 048430 670 ISYHELQQATNGFGES-NLLGSGSFDNVYKATLA-NGVSVAVKVFNLQED--RALKSFDTECEVMRRIR-HRNLIKIVSS 744 (973)
Q Consensus 670 ~~~~~~~~~~~~~~~~-~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~-h~niv~l~~~ 744 (973)
+.+...+...++|... +.||+|+||.||+|+.. +++.||||+++.... .....+.+|+.++++++ ||||++++++
T Consensus 18 ~~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~ 97 (327)
T 3lm5_A 18 LYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEV 97 (327)
T ss_dssp CCSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEE
T ss_pred hHHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEE
Confidence 3344445555667776 88999999999999864 689999999875432 33578899999999995 6999999999
Q ss_pred eecCCeeEEEEEecCCCCHHHHhhhC-CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCC---CCcEE
Q 048430 745 CSNPGFKALIMQYMPQGSLEKWLYSH-NYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDD---DMVAH 820 (973)
Q Consensus 745 ~~~~~~~~lv~e~~~~gsL~~~l~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~---~~~~k 820 (973)
+.+.+..++||||+++|+|.+++... ...+++.++..++.|++.||+||| +.+|+||||||+||+++. ++.+|
T Consensus 98 ~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH---~~givH~Dikp~NIl~~~~~~~~~~k 174 (327)
T 3lm5_A 98 YENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLH---QNNIVHLDLKPQNILLSSIYPLGDIK 174 (327)
T ss_dssp EECSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESCBTTBCCEE
T ss_pred EEeCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCcCChHHEEEecCCCCCcEE
Confidence 99999999999999999999998654 257999999999999999999999 789999999999999998 78999
Q ss_pred EeecccccccCCCCCcccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCC
Q 048430 821 LGDFGIAKLLDGVDPVTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLP 900 (973)
Q Consensus 821 l~Dfgla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 900 (973)
|+|||+++...... ......||+.|+|||.+....++.++|||||||++|||++|+.||......+ ....+.....
T Consensus 175 L~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~--~~~~i~~~~~ 250 (327)
T 3lm5_A 175 IVDFGMSRKIGHAC--ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQE--TYLNISQVNV 250 (327)
T ss_dssp ECCGGGCEEC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHHHTCC
T ss_pred EeeCccccccCCcc--ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchH--HHHHHHhccc
Confidence 99999998764322 2234579999999999998999999999999999999999999986532211 1111111000
Q ss_pred cchhhhcccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 901 GAVTEVVDANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 901 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
.. .. .....++..+.+++.+||+.||++|||++|+++|
T Consensus 251 ~~-------------~~------~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h 288 (327)
T 3lm5_A 251 DY-------------SE------ETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSH 288 (327)
T ss_dssp CC-------------CT------TTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred cc-------------Cc------hhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCC
Confidence 00 00 0011245668899999999999999999999976
No 233
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=1.1e-36 Score=328.44 Aligned_cols=248 Identities=23% Similarity=0.373 Sum_probs=196.6
Q ss_pred hcCCCCCccccccCceEEEEEEeC-CCeEEEEEEEeccc---hhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEE
Q 048430 679 TNGFGESNLLGSGSFDNVYKATLA-NGVSVAVKVFNLQE---DRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALI 754 (973)
Q Consensus 679 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 754 (973)
.++|...+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|+.+++.++||||+++++++...+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV 89 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence 357888999999999999999965 79999999987543 22356789999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCCC
Q 048430 755 MQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGVD 834 (973)
Q Consensus 755 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 834 (973)
|||+++++|.+++.... .+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++.......
T Consensus 90 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~ 165 (276)
T 2h6d_A 90 MEYVSGGELFDYICKHG-RVEEMEARRLFQQILSAVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 165 (276)
T ss_dssp EECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC--
T ss_pred EeccCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCChhhEEECCCCCEEEeecccccccCCCc
Confidence 99999999999998765 6899999999999999999999 7899999999999999999999999999998764322
Q ss_pred CcccccccccccccCccCCCCCCC-CcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhcccccCC
Q 048430 835 PVTQTMTLATIGYMAPEYGSEGIV-SISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLLS 913 (973)
Q Consensus 835 ~~~~~~~~~~~~y~aPE~~~~~~~-~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 913 (973)
......+++.|+|||...+..+ +.++||||||+++|||++|+.||...... .....+... ...
T Consensus 166 --~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~~~~~~~~~------------~~~ 229 (276)
T 2h6d_A 166 --FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVP--TLFKKIRGG------------VFY 229 (276)
T ss_dssp -------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHC------------CCC
T ss_pred --ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHH--HHHHHhhcC------------ccc
Confidence 2234468999999998887665 68999999999999999999998652211 111111110 000
Q ss_pred CCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 914 REDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
.+..++..+.+++.+||+.||++||++.|+++|
T Consensus 230 -----------~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 230 -----------IPEYLNRSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp -----------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred -----------CchhcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 011234568899999999999999999999987
No 234
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=1.2e-37 Score=350.86 Aligned_cols=253 Identities=13% Similarity=0.137 Sum_probs=183.9
Q ss_pred cCCCCCccccccCceEEEEEEe-CCCeEEEEEEEeccch---hhHHHHHHHHHHHHhc--cCCceeEEE-------eeee
Q 048430 680 NGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQED---RALKSFDTECEVMRRI--RHRNLIKIV-------SSCS 746 (973)
Q Consensus 680 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l--~h~niv~l~-------~~~~ 746 (973)
..|...+.||+|+||.||+|+. .+++.||||+++.... ...+.+.+|+.+++.+ +||||++++ +++.
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~ 141 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVA 141 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEE
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhee
Confidence 4577889999999999999995 4799999999986532 3456778886655555 599988865 3332
Q ss_pred cC-----------------CeeEEEEEecCCCCHHHHhhhCCCCCCHHHH------HHHHHHHHHHHHHhhhcCCCCeEE
Q 048430 747 NP-----------------GFKALIMQYMPQGSLEKWLYSHNYSLTIRQR------LDIMIDVASALEYLHHGYSTPIIH 803 (973)
Q Consensus 747 ~~-----------------~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~------~~i~~~i~~~L~~LH~~~~~~ivH 803 (973)
.+ ...++||||++ |+|.+++......+.+..+ ..++.||+.||+||| +.+|+|
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH---~~~ivH 217 (371)
T 3q60_A 142 VQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQ---SKGLVH 217 (371)
T ss_dssp ETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHH---HTTEEE
T ss_pred cCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHH---HCCCcc
Confidence 22 34799999998 8999999875434566666 788899999999999 799999
Q ss_pred ccCCCCcEEeCCCCcEEEeecccccccCCCCCcccccccccccccCccCCCC--CCCCcchhHHHHHHHHHHHHhCCCCC
Q 048430 804 CDLKPNNVLLDDDMVAHLGDFGIAKLLDGVDPVTQTMTLATIGYMAPEYGSE--GIVSISGDVYSFGILMMETFTRRKPT 881 (973)
Q Consensus 804 ~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~sDvws~Gvvl~elltg~~p~ 881 (973)
|||||+|||++.++.+||+|||+++.... ......+|+.|+|||.+.+ ..++.++|||||||++|||++|+.||
T Consensus 218 rDikp~NIll~~~~~~kL~DFG~a~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf 293 (371)
T 3q60_A 218 GHFTPDNLFIMPDGRLMLGDVSALWKVGT----RGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPF 293 (371)
T ss_dssp TTCSGGGEEECTTSCEEECCGGGEEETTC----EEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCST
T ss_pred CcCCHHHEEECCCCCEEEEecceeeecCC----CccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCC
Confidence 99999999999999999999999986542 1213457799999999877 67999999999999999999999999
Q ss_pred CccccCcccHHHHHHhhCCcc-hhhhcccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 882 NEMFTGEMSLKQWVAESLPGA-VTEVVDANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 882 ~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
.......... .... ......... .......+++.+.+++.+||+.||++||+++|+++|
T Consensus 294 ~~~~~~~~~~-------~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 353 (371)
T 3q60_A 294 GLVTPGIKGS-------WKRPSLRVPGTDSL----------AFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMET 353 (371)
T ss_dssp TBCCTTCTTC-------CCBCCTTSCCCCSC----------CCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTS
T ss_pred CCcCcccccc-------hhhhhhhhcccccc----------chhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 7643221100 0000 000000000 001112346778999999999999999999999875
No 235
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=3.6e-37 Score=369.94 Aligned_cols=260 Identities=23% Similarity=0.355 Sum_probs=208.4
Q ss_pred HhcCCCCCccccccCceEEEEEEeC----CCeEEEEEEEeccc-hhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeE
Q 048430 678 ATNGFGESNLLGSGSFDNVYKATLA----NGVSVAVKVFNLQE-DRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKA 752 (973)
Q Consensus 678 ~~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 752 (973)
..++|...+.||+|+||.||+|... .+..||||+++... ....+.+.+|+.++++++||||+++++++.+ +..+
T Consensus 388 ~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~-~~~~ 466 (656)
T 2j0j_A 388 QRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVW 466 (656)
T ss_dssp CGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCE
T ss_pred ccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec-CceE
Confidence 3467888899999999999999863 35689999986543 3445789999999999999999999999854 5689
Q ss_pred EEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCC
Q 048430 753 LIMQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDG 832 (973)
Q Consensus 753 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~ 832 (973)
+||||+++|+|.+++......+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 467 lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDikp~NILl~~~~~vkL~DFG~a~~~~~ 543 (656)
T 2j0j_A 467 IIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 543 (656)
T ss_dssp EEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC
T ss_pred EEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccchHhEEEeCCCCEEEEecCCCeecCC
Confidence 999999999999999987667999999999999999999999 78999999999999999999999999999987654
Q ss_pred CCCcccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCccccCcccHHHHHHhhCCcchhhhccccc
Q 048430 833 VDPVTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFT-RRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANL 911 (973)
Q Consensus 833 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 911 (973)
..........+|+.|+|||.+....++.++|||||||++|||++ |..||...... .....+.....
T Consensus 544 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~--~~~~~i~~~~~----------- 610 (656)
T 2j0j_A 544 STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN--DVIGRIENGER----------- 610 (656)
T ss_dssp ----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHHHHHHHTCC-----------
T ss_pred CcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHH--HHHHHHHcCCC-----------
Confidence 33333344557889999999888899999999999999999997 99998653221 11111111000
Q ss_pred CCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHHHH
Q 048430 912 LSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIKKIL 965 (973)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~~~~ 965 (973)
...+..+++.+.+++.+||+.||++||++.|+++.|+++.+..
T Consensus 611 -----------~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~~~ 653 (656)
T 2j0j_A 611 -----------LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE 653 (656)
T ss_dssp -----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred -----------CCCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHh
Confidence 0011234667899999999999999999999999999987654
No 236
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=8.2e-37 Score=337.30 Aligned_cols=253 Identities=24% Similarity=0.299 Sum_probs=199.5
Q ss_pred HhcCCCCCccccccCceEEEEEEe-CCCeEEEEEEEeccc--------hhhHHHHHHHHHHHHhccCCceeEEEeeeecC
Q 048430 678 ATNGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQE--------DRALKSFDTECEVMRRIRHRNLIKIVSSCSNP 748 (973)
Q Consensus 678 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--------~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 748 (973)
..++|...+.||+|+||.||+|+. .+++.||||++.... ......+.+|++++++++||||+++++++...
T Consensus 8 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 87 (322)
T 2ycf_A 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE 87 (322)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS
T ss_pred hhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC
Confidence 346788999999999999999986 468999999986432 12234588999999999999999999998765
Q ss_pred CeeEEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCc---EEEeecc
Q 048430 749 GFKALIMQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMV---AHLGDFG 825 (973)
Q Consensus 749 ~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~---~kl~Dfg 825 (973)
. .++||||+++++|.+++.... .+++..+..++.||+.||+||| +.+|+||||||+||+++.++. +||+|||
T Consensus 88 ~-~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg 162 (322)
T 2ycf_A 88 D-YYIVLELMEGGELFDKVVGNK-RLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFG 162 (322)
T ss_dssp S-EEEEEECCTTEETHHHHSTTC-CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSSSCCEEECCCT
T ss_pred c-eEEEEecCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEecCCCCCeEEEccCc
Confidence 5 899999999999999997654 7999999999999999999999 789999999999999987664 9999999
Q ss_pred cccccCCCCCcccccccccccccCccCC---CCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcc
Q 048430 826 IAKLLDGVDPVTQTMTLATIGYMAPEYG---SEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGA 902 (973)
Q Consensus 826 la~~~~~~~~~~~~~~~~~~~y~aPE~~---~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 902 (973)
+++.... ........||+.|+|||.+ ....++.++|||||||++|||++|+.||....... .+...+.......
T Consensus 163 ~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~ 239 (322)
T 2ycf_A 163 HSKILGE--TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV-SLKDQITSGKYNF 239 (322)
T ss_dssp TCEECCC--CHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSS-CHHHHHHHTCCCC
T ss_pred cceeccc--ccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHH-HHHHHHHhCcccc
Confidence 9987642 2222345689999999975 35678999999999999999999999997543222 2222222111000
Q ss_pred hhhhcccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 903 VTEVVDANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 903 ~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
. ......++.++.+++.+||+.||++||+++|+++|
T Consensus 240 ~-------------------~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h 275 (322)
T 2ycf_A 240 I-------------------PEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 275 (322)
T ss_dssp C-------------------HHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred C-------------------chhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhhC
Confidence 0 00112345678999999999999999999999975
No 237
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=9.9e-36 Score=337.93 Aligned_cols=345 Identities=19% Similarity=0.208 Sum_probs=222.2
Q ss_pred CCCCCCcc-eEEEEEeeCCCCcEEEEecCCCCCCCcCCCCCCCCCCCcEEEecCCCCCCCCCc-ccccccCCcEEEccCC
Q 048430 26 TNTSASVC-NWVGVTCSIRHGRVAALSLPNLSLGGTLPPHVGNLSFLVSLNISGNSFYDTLPN-ELWHMRRLKIIDFSSN 103 (973)
Q Consensus 26 ~~~~~~~c-~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~-~~~~l~~L~~L~Ls~n 103 (973)
|..+.+|| .|.+..|.....+| ............-..+.+++.|++++|.+. .+|. .+..+++|++|+|++|
T Consensus 6 ~~~~~~C~~~~~~~~c~~~~~~i-----~~~~~~~~~~~~~~~l~~l~~l~l~~~~l~-~l~~~~~~~l~~L~~L~L~~n 79 (390)
T 3o6n_A 6 RQPEYKCIDSNLQYDCVFYDVHI-----DMQTQDVYFGFEDITLNNQKIVTFKNSTMR-KLPAALLDSFRQVELLNLNDL 79 (390)
T ss_dssp -CCEECBCC------EEEESCEE-----CSSCCCCEESCSSGGGCCCSEEEEESCEES-EECTHHHHHCCCCSEEECTTS
T ss_pred CCCccceehhhhhhccceeeeee-----ecccccccccccccccCCceEEEecCCchh-hCChhHhcccccCcEEECCCC
Confidence 33356666 45555554322222 222222233333456789999999999985 4554 4788999999999999
Q ss_pred CCCCCCCccccCCCCCccEEEeeCcccCCCCCccccCCCCCCeEEccCccccccCCccccCCCCCccEEEcccccccccC
Q 048430 104 SLSGSLPGDMCNSFTQLESFDVSSNKITGEFPSAIVNISSLKSIRLDNNSLSGSFPTDLCTRLPSLVQLRLLGNNITGRI 183 (973)
Q Consensus 104 ~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~ 183 (973)
.+. .+|...+..+++|++|+|++|.+++..|..|+++++|++|+|++|+++ .+|..+|..+++|++|+|++|++++.
T Consensus 80 ~i~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~l~~L~~L~L~~n~l~~~- 156 (390)
T 3o6n_A 80 QIE-EIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS-SLPRGIFHNTPKLTTLSMSNNNLERI- 156 (390)
T ss_dssp CCC-EECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCBC-
T ss_pred ccc-ccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccC-cCCHHHhcCCCCCcEEECCCCccCcc-
Confidence 998 566666788999999999999999888888999999999999999998 88888888899999999999998742
Q ss_pred CCCCCCccccCCCCccEEEecCCcccCccccccccCCcceeEEeecccccccCCCCCCccccceeeeccccccccCcchh
Q 048430 184 PNREIPNEIGNLHNLKILDLGGNNIAGLIPSMIFNNSNMVAILLYGNHLSGHLPSSIYLPNLENLFLWKNNLSGIIPDSI 263 (973)
Q Consensus 184 ~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l 263 (973)
.|..++++++|++|++++|++++.. +.. +++|++|++++|.+++.
T Consensus 157 ----~~~~~~~l~~L~~L~l~~n~l~~~~---~~~-----------------------l~~L~~L~l~~n~l~~~----- 201 (390)
T 3o6n_A 157 ----EDDTFQATTSLQNLQLSSNRLTHVD---LSL-----------------------IPSLFHANVSYNLLSTL----- 201 (390)
T ss_dssp ----CTTTTSSCTTCCEEECCSSCCSBCC---GGG-----------------------CTTCSEEECCSSCCSEE-----
T ss_pred ----ChhhccCCCCCCEEECCCCcCCccc---ccc-----------------------ccccceeeccccccccc-----
Confidence 3456888889999999999888542 333 45555566666555432
Q ss_pred cccCcccEEEeccccccccCCCcccccccceEEEccCCcCCCCCCCcchhhhhhhccCCcCcEEEccCCCCCCCCCCccc
Q 048430 264 CNASEATILELSSNLFSGLVPNTFGNCRQLQILSLGDNQLTTGSSAQGQIFYSSLAKCRYLRVLVLDTNPLKGVIPNSIG 343 (973)
Q Consensus 264 ~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~ 343 (973)
...++|+.|++++|.+...... ..++|+.|++++|+++.. ..+..+++|+.|++++|.+.+..
T Consensus 202 ~~~~~L~~L~l~~n~l~~~~~~---~~~~L~~L~l~~n~l~~~---------~~l~~l~~L~~L~Ls~n~l~~~~----- 264 (390)
T 3o6n_A 202 AIPIAVEELDASHNSINVVRGP---VNVELTILKLQHNNLTDT---------AWLLNYPGLVEVDLSYNELEKIM----- 264 (390)
T ss_dssp ECCSSCSEEECCSSCCCEEECC---CCSSCCEEECCSSCCCCC---------GGGGGCTTCSEEECCSSCCCEEE-----
T ss_pred CCCCcceEEECCCCeeeecccc---ccccccEEECCCCCCccc---------HHHcCCCCccEEECCCCcCCCcC-----
Confidence 2234566666666666554322 235666666666666541 23445555555555555554332
Q ss_pred ccccccceeecccCCccccCCCCCCCCCcccEEEeecCccccccCcccCCCCCCCEEEccCCcCCCCCchhhhccCcCCe
Q 048430 344 NLSTSLENFYAGSSQLSGGIPVGFGNLSNLLVLSLVNNELAGAIPTVLGKLQKLQGLDLNSNKLKGFIPTDLCKLEKLNT 423 (973)
Q Consensus 344 ~l~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 423 (973)
|..|..+++|++|++++|++++ +|..+..+++|++|+|++|+++ .+|..+..+++|+.
T Consensus 265 --------------------~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~ 322 (390)
T 3o6n_A 265 --------------------YHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLEN 322 (390)
T ss_dssp --------------------SGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSE
T ss_pred --------------------hhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCcce-ecCccccccCcCCE
Confidence 2234555666666666666663 4445556666666666666666 34555566666666
Q ss_pred eecCCccccCcCcccccCcCCCCeeeccCCCCC
Q 048430 424 LLSNNNALQGQIPTCLANLTSLRHLDFRSNSLN 456 (973)
Q Consensus 424 L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 456 (973)
|++++|.++... +..+++|+.|++++|++.
T Consensus 323 L~L~~N~i~~~~---~~~~~~L~~L~l~~N~~~ 352 (390)
T 3o6n_A 323 LYLDHNSIVTLK---LSTHHTLKNLTLSHNDWD 352 (390)
T ss_dssp EECCSSCCCCCC---CCTTCCCSEEECCSSCEE
T ss_pred EECCCCccceeC---chhhccCCEEEcCCCCcc
Confidence 666666665331 445555666666666554
No 238
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=4.1e-37 Score=334.62 Aligned_cols=258 Identities=26% Similarity=0.377 Sum_probs=198.3
Q ss_pred cCCCCCccccccCceEEEEEEeC--CC--eEEEEEEEecc---chhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeE
Q 048430 680 NGFGESNLLGSGSFDNVYKATLA--NG--VSVAVKVFNLQ---EDRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKA 752 (973)
Q Consensus 680 ~~~~~~~~lg~G~~g~Vy~~~~~--~~--~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 752 (973)
++|...+.||+|+||.||+|++. ++ ..||||+++.. .....+.+.+|++++++++||||+++++++..+. .+
T Consensus 18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~ 96 (291)
T 1u46_A 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MK 96 (291)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CE
T ss_pred hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ce
Confidence 56888899999999999999852 33 36899988654 2345678999999999999999999999998765 78
Q ss_pred EEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCC
Q 048430 753 LIMQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDG 832 (973)
Q Consensus 753 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~ 832 (973)
+|+||+++++|.+++......+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++.....
T Consensus 97 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~ 173 (291)
T 1u46_A 97 MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ 173 (291)
T ss_dssp EEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC
T ss_pred eeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHH---hCCcccCCCchheEEEcCCCCEEEccccccccccc
Confidence 999999999999999876557999999999999999999999 78999999999999999999999999999987654
Q ss_pred CCCc--ccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCccccCcccHHHHHHhhCCcchhhhccc
Q 048430 833 VDPV--TQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFT-RRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDA 909 (973)
Q Consensus 833 ~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 909 (973)
.... ......+|..|+|||......++.++||||||+++|||++ |+.||..... ...........
T Consensus 174 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-----~~~~~~~~~~~------- 241 (291)
T 1u46_A 174 NDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG-----SQILHKIDKEG------- 241 (291)
T ss_dssp -CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCH-----HHHHHHHHTSC-------
T ss_pred cccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCH-----HHHHHHHHccC-------
Confidence 3322 1233457889999999888889999999999999999999 9999865321 11111110000
Q ss_pred ccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHHH
Q 048430 910 NLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIKKI 964 (973)
Q Consensus 910 ~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~~~ 964 (973)
.. ...+..++.++.+++.+||+.||++||++.|++++|+++...
T Consensus 242 -~~----------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 285 (291)
T 1u46_A 242 -ER----------LPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPT 285 (291)
T ss_dssp -CC----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred -CC----------CCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCcc
Confidence 00 001123456789999999999999999999999999987654
No 239
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=8.7e-37 Score=357.07 Aligned_cols=251 Identities=22% Similarity=0.283 Sum_probs=199.5
Q ss_pred hcCCCCCccccccCceEEEEEEeC-CCeEEEEEEEeccc--hhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEEE
Q 048430 679 TNGFGESNLLGSGSFDNVYKATLA-NGVSVAVKVFNLQE--DRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALIM 755 (973)
Q Consensus 679 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 755 (973)
.++|...+.||+|+||.||+|+.. +++.||||++.... ......+.+|+.+++.++||||+++++++.+....++||
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 115 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVM 115 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 446888999999999999999964 78999999987543 233567899999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCC---CCcEEEeecccccccCC
Q 048430 756 QYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDD---DMVAHLGDFGIAKLLDG 832 (973)
Q Consensus 756 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~---~~~~kl~Dfgla~~~~~ 832 (973)
||+++|+|.+++.... .+++..+..++.||+.||+||| +.+|+||||||+||+++. ++.+||+|||+++....
T Consensus 116 e~~~~g~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~ 191 (494)
T 3lij_A 116 ECYKGGELFDEIIHRM-KFNEVDAAVIIKQVLSGVTYLH---KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFEN 191 (494)
T ss_dssp ECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBT
T ss_pred ecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCC
Confidence 9999999999887654 6999999999999999999999 789999999999999976 45599999999987653
Q ss_pred CCCcccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhcccccC
Q 048430 833 VDPVTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLL 912 (973)
Q Consensus 833 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 912 (973)
. .......||+.|+|||.+. ..++.++||||+||++|+|++|+.||...... .+...+.... ..
T Consensus 192 ~--~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--~~~~~i~~~~-----------~~ 255 (494)
T 3lij_A 192 Q--KKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQ--EILRKVEKGK-----------YT 255 (494)
T ss_dssp T--BCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHTC-----------CC
T ss_pred C--ccccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHhCC-----------CC
Confidence 2 2234457999999999876 56899999999999999999999999653221 1111111100 00
Q ss_pred CCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 913 SREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
. . ......+++.+.+++.+||+.||++|||+.|+++|
T Consensus 256 ~-~-------~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 292 (494)
T 3lij_A 256 F-D-------SPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEH 292 (494)
T ss_dssp C-C-------SGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred C-C-------chhcccCCHHHHHHHHHHCCCChhhCccHHHHhcC
Confidence 0 0 00112345678899999999999999999999987
No 240
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=2e-37 Score=339.17 Aligned_cols=262 Identities=24% Similarity=0.324 Sum_probs=187.1
Q ss_pred HHhcCCCCCccccccCceEEEEEEe-CCCeEEEEEEEeccc-hhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEE
Q 048430 677 QATNGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQE-DRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALI 754 (973)
Q Consensus 677 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 754 (973)
...++|...+.||+|+||.||+|.. .+++.||||++.... ....+.+.+|+.++++++||||+++++++...+..++|
T Consensus 12 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 91 (303)
T 2vwi_A 12 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLV 91 (303)
T ss_dssp -CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEE
T ss_pred cchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEE
Confidence 3457899999999999999999985 478999999886543 23456788999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhhh-------CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccc
Q 048430 755 MQYMPQGSLEKWLYS-------HNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIA 827 (973)
Q Consensus 755 ~e~~~~gsL~~~l~~-------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla 827 (973)
|||+++++|.+++.. ....+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++
T Consensus 92 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~ 168 (303)
T 2vwi_A 92 MKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH---KNGQIHRDVKAGNILLGEDGSVQIADFGVS 168 (303)
T ss_dssp EECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTCCEEECCCHHH
T ss_pred ehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHH---hCCCCCCCCChhhEEEcCCCCEEEEeccch
Confidence 999999999999974 2346899999999999999999999 789999999999999999999999999998
Q ss_pred cccCCCCC----cccccccccccccCccCCCC-CCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcc
Q 048430 828 KLLDGVDP----VTQTMTLATIGYMAPEYGSE-GIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGA 902 (973)
Q Consensus 828 ~~~~~~~~----~~~~~~~~~~~y~aPE~~~~-~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 902 (973)
........ .......||+.|+|||.... ..++.++|||||||++|||++|+.||........ . ..........
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~-~~~~~~~~~~ 246 (303)
T 2vwi_A 169 AFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKV-L-MLTLQNDPPS 246 (303)
T ss_dssp HHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGH-H-HHHHTSSCCC
T ss_pred heeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhH-H-HHHhccCCCc
Confidence 76543211 11234468999999998765 5689999999999999999999999976432211 1 1111100000
Q ss_pred h-hhhcccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 903 V-TEVVDANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 903 ~-~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
. ....+... ...++.++.+++.+||+.||++||++.|+++|
T Consensus 247 ~~~~~~~~~~--------------~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 288 (303)
T 2vwi_A 247 LETGVQDKEM--------------LKKYGKSFRKMISLCLQKDPEKRPTAAELLRH 288 (303)
T ss_dssp TTC-----CC--------------CCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred cccccccchh--------------hhhhhHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 0 00000000 11234568899999999999999999999985
No 241
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=8.2e-37 Score=331.75 Aligned_cols=244 Identities=17% Similarity=0.252 Sum_probs=198.3
Q ss_pred hcCCCCCccccccCceEEEEEEeC-CCeEEEEEEEeccc--hhhHHHHHHHHHHHHhc-cCCceeEEEeeeecCCeeEEE
Q 048430 679 TNGFGESNLLGSGSFDNVYKATLA-NGVSVAVKVFNLQE--DRALKSFDTECEVMRRI-RHRNLIKIVSSCSNPGFKALI 754 (973)
Q Consensus 679 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv 754 (973)
.++|...+.||+|+||.||+|+.. +++.||||+++... ......+.+|+..+.++ +||||+++++++.+++..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv 89 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQ 89 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEE
T ss_pred cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence 467888999999999999999965 79999999987542 33456788999999999 899999999999999999999
Q ss_pred EEecCCCCHHHHhhhCC---CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCC---------------
Q 048430 755 MQYMPQGSLEKWLYSHN---YSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDD--------------- 816 (973)
Q Consensus 755 ~e~~~~gsL~~~l~~~~---~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~--------------- 816 (973)
|||+++++|.+++.... ..+++.++..++.|++.||+||| +.+|+||||||+||+++.+
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~ 166 (289)
T 1x8b_A 90 NEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIH---SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDW 166 (289)
T ss_dssp EECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEC-----------------
T ss_pred EEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHH---hCCEeecCCCHHHEEEcCCCCCcccccccccccc
Confidence 99999999999998642 46899999999999999999999 7899999999999999844
Q ss_pred ----CcEEEeecccccccCCCCCcccccccccccccCccCCCCC-CCCcchhHHHHHHHHHHHHhCCCCCCccccCcccH
Q 048430 817 ----MVAHLGDFGIAKLLDGVDPVTQTMTLATIGYMAPEYGSEG-IVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSL 891 (973)
Q Consensus 817 ----~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~ 891 (973)
..+||+|||.+....... ...||+.|+|||.+... .++.++|||||||++|||++|..|+... ...
T Consensus 167 ~~~~~~~kl~Dfg~~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~----~~~ 237 (289)
T 1x8b_A 167 ASNKVMFKIGDLGHVTRISSPQ-----VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNG----DQW 237 (289)
T ss_dssp ---CCCEEECCCTTCEETTCSC-----CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSS----HHH
T ss_pred cCCceEEEEcccccccccCCcc-----ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcch----hHH
Confidence 479999999998764322 23589999999987765 5678999999999999999998775321 111
Q ss_pred HHHHHhhCCcchhhhcccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 892 KQWVAESLPGAVTEVVDANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 892 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
... .. ..... .+..++.++.+++.+||+.||++||++.|+++|
T Consensus 238 ~~~-~~-----------~~~~~-----------~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 280 (289)
T 1x8b_A 238 HEI-RQ-----------GRLPR-----------IPQVLSQEFTELLKVMIHPDPERRPSAMALVKH 280 (289)
T ss_dssp HHH-HT-----------TCCCC-----------CSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred HHH-Hc-----------CCCCC-----------CCcccCHHHHHHHHHHhCCCcccCCCHHHHhhC
Confidence 111 10 00000 011235668999999999999999999999986
No 242
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=2.7e-37 Score=333.88 Aligned_cols=253 Identities=21% Similarity=0.288 Sum_probs=202.6
Q ss_pred hcCCCCCccccccCceEEEEEEeC-CCeEEEEEEEeccc--hhhHHHHHHHHHHHHhccCCceeEEEeeee--cCCeeEE
Q 048430 679 TNGFGESNLLGSGSFDNVYKATLA-NGVSVAVKVFNLQE--DRALKSFDTECEVMRRIRHRNLIKIVSSCS--NPGFKAL 753 (973)
Q Consensus 679 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~--~~~~~~l 753 (973)
.++|...+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+.++++++||||+++++++. .....++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 357888999999999999999864 78999999997543 344578999999999999999999999874 4678999
Q ss_pred EEEecCCCCHHHHhhhCC---CCCCHHHHHHHHHHHHHHHHHhhhcCCCC-----eEEccCCCCcEEeCCCCcEEEeecc
Q 048430 754 IMQYMPQGSLEKWLYSHN---YSLTIRQRLDIMIDVASALEYLHHGYSTP-----IIHCDLKPNNVLLDDDMVAHLGDFG 825 (973)
Q Consensus 754 v~e~~~~gsL~~~l~~~~---~~l~~~~~~~i~~~i~~~L~~LH~~~~~~-----ivH~dlk~~Nill~~~~~~kl~Dfg 825 (973)
||||+++++|.+++.... ..+++..+..++.|++.||+||| +.+ |+||||||+||+++.++.+||+|||
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg 161 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECH---RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFG 161 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HHC------CCCCCSGGGEEECSSSCEEECCCC
T ss_pred EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHh---cccCCCCeeEEeccchhhEEEcCCCCEEEecCc
Confidence 999999999999997532 35999999999999999999999 566 9999999999999999999999999
Q ss_pred cccccCCCCCcccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhh
Q 048430 826 IAKLLDGVDPVTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTE 905 (973)
Q Consensus 826 la~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 905 (973)
.++...... .......+++.|+|||...+..++.++||||||+++|||++|+.||..... ..+...+....
T Consensus 162 ~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--~~~~~~i~~~~------ 232 (279)
T 2w5a_A 162 LARILNHDT-SFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ--KELAGKIREGK------ 232 (279)
T ss_dssp HHHHC---C-HHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHTC------
T ss_pred hheeecccc-ccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCH--HHHHHHHhhcc------
Confidence 998764322 222344689999999998888899999999999999999999999875321 11111111100
Q ss_pred hcccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHH
Q 048430 906 VVDANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLK 959 (973)
Q Consensus 906 ~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~ 959 (973)
... .+..++.++.+++.+||+.||++||+++|++++++
T Consensus 233 -----~~~-----------~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~ 270 (279)
T 2w5a_A 233 -----FRR-----------IPYRYSDELNEIITRMLNLKDYHRPSVEEILENPL 270 (279)
T ss_dssp -----CCC-----------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTT
T ss_pred -----ccc-----------CCcccCHHHHHHHHHHcCCCcccCCCHHHHHhChh
Confidence 000 01124567899999999999999999999998754
No 243
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=1.8e-36 Score=341.00 Aligned_cols=267 Identities=23% Similarity=0.221 Sum_probs=195.5
Q ss_pred hcCCCCCccccccCceEEEEEEe-CCCeEEEEEEEecc--chhhHHHHHHHHHHHHhccCCceeEEEeeeecCC------
Q 048430 679 TNGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQ--EDRALKSFDTECEVMRRIRHRNLIKIVSSCSNPG------ 749 (973)
Q Consensus 679 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------ 749 (973)
.++|...+.||+|+||.||+|.. .+++.||||++... .....+.+.+|+.+++.++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 36788899999999999999985 47899999998753 2344567889999999999999999999987654
Q ss_pred eeEEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccc
Q 048430 750 FKALIMQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKL 829 (973)
Q Consensus 750 ~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~ 829 (973)
..++||||+++ +|.+++.. .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 104 ~~~lv~e~~~~-~l~~~~~~---~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~ 176 (371)
T 2xrw_A 104 DVYIVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART 176 (371)
T ss_dssp EEEEEEECCSE-EHHHHHHS---CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCCCC---
T ss_pred ceEEEEEcCCC-CHHHHHhh---ccCHHHHHHHHHHHHHHHHHHH---HCCeecccCCHHHEEEcCCCCEEEEEeecccc
Confidence 78999999975 78888863 5899999999999999999999 78999999999999999999999999999986
Q ss_pred cCCCCCcccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhh--CCcc-----
Q 048430 830 LDGVDPVTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAES--LPGA----- 902 (973)
Q Consensus 830 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~--~~~~----- 902 (973)
.... .......||+.|+|||.+.+..++.++|||||||++|||++|+.||..... ...+.... ....
T Consensus 177 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~----~~~~~~i~~~~~~~~~~~~ 250 (371)
T 2xrw_A 177 AGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDH----IDQWNKVIEQLGTPCPEFM 250 (371)
T ss_dssp ---------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSH----HHHHHHHHC-CCCCCHHHH
T ss_pred cccc--cccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCH----HHHHHHHHHHhCCCCHHHH
Confidence 5422 223345789999999999888899999999999999999999999865321 11111110 0000
Q ss_pred ------hhhhccc--ccCCCCchh------hhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 048430 903 ------VTEVVDA--NLLSREDEE------DADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADL 958 (973)
Q Consensus 903 ------~~~~~d~--~l~~~~~~~------~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L 958 (973)
.....+. ......... ...........+.++.+++.+||+.||++|||++|+++|=
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp 320 (371)
T 2xrw_A 251 KKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 320 (371)
T ss_dssp TTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSH
T ss_pred HHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCc
Confidence 0000000 000000000 0001112234577899999999999999999999999873
No 244
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.3e-37 Score=344.24 Aligned_cols=265 Identities=23% Similarity=0.279 Sum_probs=196.8
Q ss_pred hcCCCCCccccccCceEEEEEEe-CCCeEEEEEEEecc--chhhHHHHHHHHHHHHhccCCceeEEEeeeecC------C
Q 048430 679 TNGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQ--EDRALKSFDTECEVMRRIRHRNLIKIVSSCSNP------G 749 (973)
Q Consensus 679 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~ 749 (973)
.++|...+.||+|+||.||+|.. .+|+.||||++... .....+.+.+|+++++.++||||+++++++... .
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 45788899999999999999996 57999999998543 233457789999999999999999999998765 3
Q ss_pred eeEEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccc
Q 048430 750 FKALIMQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKL 829 (973)
Q Consensus 750 ~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~ 829 (973)
..++||||+ +++|.+++... .+++..+..++.||++||+||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~~--~l~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 177 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKHE--KLGEDRIQFLVYQMLKGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLARQ 177 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred eEEEEEecC-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCccccCcCHHHEEEcCCCCEEEEeeecccc
Confidence 469999999 78999999874 5899999999999999999999 79999999999999999999999999999987
Q ss_pred cCCCCCcccccccccccccCccCCCC-CCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhC--Ccchhhh
Q 048430 830 LDGVDPVTQTMTLATIGYMAPEYGSE-GIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESL--PGAVTEV 906 (973)
Q Consensus 830 ~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~ 906 (973)
.... .....+|+.|+|||.+.+ ..++.++||||+||++|||++|+.||.+.... ..+........ +......
T Consensus 178 ~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~l~~i~~~~g~~~~~~~~~ 252 (367)
T 1cm8_A 178 ADSE----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHL-DQLKEIMKVTGTPPAEFVQR 252 (367)
T ss_dssp CCSS----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCCCCHHHHHT
T ss_pred cccc----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHhcCCCCHHHHHH
Confidence 5421 234578999999998766 67999999999999999999999998653211 11111111111 1000000
Q ss_pred cc--------cccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 907 VD--------ANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 907 ~d--------~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
+. ..+....... .......+++++.+++.+|++.||++|||++|+++|
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~h 308 (367)
T 1cm8_A 253 LQSDEAKNYMKGLPELEKKD---FASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH 308 (367)
T ss_dssp CSCHHHHHHHHHSCCCCCCC---GGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred hhhHHHHHHHHhCCCCCCCC---HHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcC
Confidence 00 0000000000 000112345678999999999999999999999986
No 245
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=8.1e-37 Score=358.25 Aligned_cols=252 Identities=21% Similarity=0.297 Sum_probs=202.7
Q ss_pred HhcCCCCCccccccCceEEEEEEeC-CCeEEEEEEEeccch-------------hhHHHHHHHHHHHHhccCCceeEEEe
Q 048430 678 ATNGFGESNLLGSGSFDNVYKATLA-NGVSVAVKVFNLQED-------------RALKSFDTECEVMRRIRHRNLIKIVS 743 (973)
Q Consensus 678 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-------------~~~~~~~~e~~~l~~l~h~niv~l~~ 743 (973)
..++|...++||+|+||.||+|+.. +++.||||++..... ...+.+.+|+.++++++||||+++++
T Consensus 34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~ 113 (504)
T 3q5i_A 34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD 113 (504)
T ss_dssp GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 4568999999999999999999964 688999999865421 23467899999999999999999999
Q ss_pred eeecCCeeEEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCC---cEE
Q 048430 744 SCSNPGFKALIMQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDM---VAH 820 (973)
Q Consensus 744 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~---~~k 820 (973)
++.+.+..++||||+++|+|.+++.... .+++..+..++.||+.||+||| +.+|+||||||+||+++.++ .+|
T Consensus 114 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~k 189 (504)
T 3q5i_A 114 VFEDKKYFYLVTEFYEGGELFEQIINRH-KFDECDAANIMKQILSGICYLH---KHNIVHRDIKPENILLENKNSLLNIK 189 (504)
T ss_dssp EEECSSEEEEEEECCTTCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESSTTCCSSEE
T ss_pred EEEcCCEEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCcHHHEEEecCCCCccEE
Confidence 9999999999999999999999997754 6999999999999999999999 78999999999999998776 699
Q ss_pred EeecccccccCCCCCcccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCC
Q 048430 821 LGDFGIAKLLDGVDPVTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLP 900 (973)
Q Consensus 821 l~Dfgla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 900 (973)
|+|||++...... .......||+.|+|||.+. +.++.++||||+||++|+|++|+.||...... .+...+..
T Consensus 190 l~Dfg~a~~~~~~--~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--~~~~~i~~--- 261 (504)
T 3q5i_A 190 IVDFGLSSFFSKD--YKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQ--DIIKKVEK--- 261 (504)
T ss_dssp ECCCTTCEECCTT--SCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHH---
T ss_pred EEECCCCEEcCCC--CccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHc---
Confidence 9999999876532 2234457999999999876 46899999999999999999999999653211 11111111
Q ss_pred cchhhhcccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 901 GAVTEVVDANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 901 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
+ ... . .......++.++.+++.+||+.||++|||++|+++|
T Consensus 262 ~--------~~~--~------~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h 302 (504)
T 3q5i_A 262 G--------KYY--F------DFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNS 302 (504)
T ss_dssp C--------CCC--C------CHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred C--------CCC--C------CccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 0 000 0 011112346778999999999999999999999987
No 246
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=5.8e-37 Score=358.16 Aligned_cols=251 Identities=24% Similarity=0.357 Sum_probs=205.7
Q ss_pred hcCCCCCccccccCceEEEEEEeC-CCeEEEEEEEeccc---hhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEE
Q 048430 679 TNGFGESNLLGSGSFDNVYKATLA-NGVSVAVKVFNLQE---DRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALI 754 (973)
Q Consensus 679 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 754 (973)
.++|...++||+|+||.||+|+.. +++.||||++.... ....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 104 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLV 104 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 356888999999999999999965 78999999986542 33457899999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEe---CCCCcEEEeecccccccC
Q 048430 755 MQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLL---DDDMVAHLGDFGIAKLLD 831 (973)
Q Consensus 755 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill---~~~~~~kl~Dfgla~~~~ 831 (973)
|||+.+|+|.+++.... .+++..+..++.||+.||+||| +.+|+||||||+||++ +.++.+||+|||+++...
T Consensus 105 ~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 180 (484)
T 3nyv_A 105 GEVYTGGELFDEIISRK-RFSEVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE 180 (484)
T ss_dssp ECCCCSCBHHHHHHTCS-CCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBC
T ss_pred EecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEcc
Confidence 99999999999998765 7999999999999999999999 7899999999999999 567899999999998765
Q ss_pred CCCCcccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhccccc
Q 048430 832 GVDPVTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANL 911 (973)
Q Consensus 832 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 911 (973)
... ......||+.|+|||.+.+ .++.++||||+||++|+|++|+.||..... ......+.... .
T Consensus 181 ~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~--~~~~~~i~~~~-----------~ 244 (484)
T 3nyv_A 181 ASK--KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANE--YDILKKVEKGK-----------Y 244 (484)
T ss_dssp CCC--SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHCC-----------C
T ss_pred ccc--ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCH--HHHHHHHHcCC-----------C
Confidence 332 2334579999999998765 689999999999999999999999965321 11111111100 0
Q ss_pred CCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 912 LSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
.. ..+....+++++.+++.+||+.+|++|||+.|+++|
T Consensus 245 ~~--------~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 282 (484)
T 3nyv_A 245 TF--------ELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDH 282 (484)
T ss_dssp CC--------CSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred CC--------CCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhhC
Confidence 00 001112346678999999999999999999999986
No 247
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=2.2e-36 Score=330.05 Aligned_cols=254 Identities=24% Similarity=0.333 Sum_probs=204.8
Q ss_pred HHhcCCCCCccccccCceEEEEEEeC-CCeEEEEEEEeccc---------hhhHHHHHHHHHHHHhcc-CCceeEEEeee
Q 048430 677 QATNGFGESNLLGSGSFDNVYKATLA-NGVSVAVKVFNLQE---------DRALKSFDTECEVMRRIR-HRNLIKIVSSC 745 (973)
Q Consensus 677 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---------~~~~~~~~~e~~~l~~l~-h~niv~l~~~~ 745 (973)
...++|...+.||+|+||.||+|+.. +++.||||+++... ....+.+.+|+++++++. ||||+++++++
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~ 93 (298)
T 1phk_A 14 GFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTY 93 (298)
T ss_dssp -CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred chhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeee
Confidence 34578889999999999999999964 68999999997542 123467889999999996 99999999999
Q ss_pred ecCCeeEEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecc
Q 048430 746 SNPGFKALIMQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFG 825 (973)
Q Consensus 746 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 825 (973)
...+..++||||+++++|.+++.... .+++.++..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||
T Consensus 94 ~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg 169 (298)
T 1phk_A 94 ETNTFFFLVFDLMKKGELFDYLTEKV-TLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFG 169 (298)
T ss_dssp ECSSEEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCT
T ss_pred ccCCeEEEEEeccCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEEcCCCcEEEeccc
Confidence 99999999999999999999998754 6899999999999999999999 7899999999999999999999999999
Q ss_pred cccccCCCCCcccccccccccccCccCCC------CCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhC
Q 048430 826 IAKLLDGVDPVTQTMTLATIGYMAPEYGS------EGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESL 899 (973)
Q Consensus 826 la~~~~~~~~~~~~~~~~~~~y~aPE~~~------~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 899 (973)
.+....... ......+++.|+|||.+. ...++.++||||||+++|||++|+.||..... ......+...
T Consensus 170 ~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~--~~~~~~~~~~- 244 (298)
T 1phk_A 170 FSCQLDPGE--KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQ--MLMLRMIMSG- 244 (298)
T ss_dssp TCEECCTTC--CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHT-
T ss_pred chhhcCCCc--ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccH--HHHHHHHhcC-
Confidence 998764322 233456899999999763 55689999999999999999999999865321 1111111110
Q ss_pred CcchhhhcccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 900 PGAVTEVVDANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 900 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
..... . .....++.++.+++.+||+.||++||+++|+++|
T Consensus 245 ----------~~~~~--~------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (298)
T 1phk_A 245 ----------NYQFG--S------PEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAH 284 (298)
T ss_dssp ----------CCCCC--T------TTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred ----------CcccC--c------ccccccCHHHHHHHHHHccCCcccCCCHHHHHhC
Confidence 00000 0 0112345678999999999999999999999875
No 248
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=1.5e-36 Score=331.55 Aligned_cols=272 Identities=23% Similarity=0.300 Sum_probs=203.6
Q ss_pred cCCCCCccccccCceEEEEEEeC-CCeEEEEEEEeccch--hhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEEEE
Q 048430 680 NGFGESNLLGSGSFDNVYKATLA-NGVSVAVKVFNLQED--RALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALIMQ 756 (973)
Q Consensus 680 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 756 (973)
++|...+.||+|+||.||+|+.. +++.||||+++.... ...+.+.+|+.++++++||||+++++++...+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 82 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence 57888999999999999999965 789999999865432 234678899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCCCC
Q 048430 757 YMPQGSLEKWLYSHN-YSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGVDP 835 (973)
Q Consensus 757 ~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 835 (973)
|++ ++|.+++.... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||.+.......
T Consensus 83 ~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~- 157 (299)
T 2r3i_A 83 FLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV- 157 (299)
T ss_dssp CCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCS-
T ss_pred ccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHeEEcCCCCEEECcchhhhhccCCc-
Confidence 997 59999998754 46899999999999999999999 7899999999999999999999999999998764322
Q ss_pred cccccccccccccCccCCCCCC-CCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhC-Ccc-h-hhhcc-cc
Q 048430 836 VTQTMTLATIGYMAPEYGSEGI-VSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESL-PGA-V-TEVVD-AN 910 (973)
Q Consensus 836 ~~~~~~~~~~~y~aPE~~~~~~-~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~-~~~-~-~~~~d-~~ 910 (973)
.......+|+.|+|||...+.. ++.++|||||||++|||++|+.||......+ .+........ +.. . ..... +.
T Consensus 158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (299)
T 2r3i_A 158 RTYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID-QLFRIFRTLGTPDEVVWPGVTSMPD 236 (299)
T ss_dssp BCTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCTTTSTTGGGSTT
T ss_pred cccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHH-HHHHHHHHhCCCchhhhhHhhcCcc
Confidence 2233456899999999877654 7999999999999999999999997532211 1222222111 110 0 00000 00
Q ss_pred cCCCCch-hhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 911 LLSREDE-EDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 911 l~~~~~~-~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
....... ...........+++++.+++.+|++.||++|||+.|+++|
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~h 284 (299)
T 2r3i_A 237 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH 284 (299)
T ss_dssp CCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 0000000 0000001112346778999999999999999999999975
No 249
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=7.4e-37 Score=341.77 Aligned_cols=266 Identities=20% Similarity=0.268 Sum_probs=206.1
Q ss_pred hcCCCCCccccccCceEEEEEEeCCCeEEEEEEEeccchhh-----------------HHHHHHHHHHHHhccCCceeEE
Q 048430 679 TNGFGESNLLGSGSFDNVYKATLANGVSVAVKVFNLQEDRA-----------------LKSFDTECEVMRRIRHRNLIKI 741 (973)
Q Consensus 679 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-----------------~~~~~~e~~~l~~l~h~niv~l 741 (973)
.++|...+.||+|+||.||+|+. +++.||||++....... .+.+.+|+.++++++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 46788899999999999999999 89999999987543211 1789999999999999999999
Q ss_pred EeeeecCCeeEEEEEecCCCCHHHH------hhhC-CCCCCHHHHHHHHHHHHHHHHHhhhcCC-CCeEEccCCCCcEEe
Q 048430 742 VSSCSNPGFKALIMQYMPQGSLEKW------LYSH-NYSLTIRQRLDIMIDVASALEYLHHGYS-TPIIHCDLKPNNVLL 813 (973)
Q Consensus 742 ~~~~~~~~~~~lv~e~~~~gsL~~~------l~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~-~~ivH~dlk~~Nill 813 (973)
++++.+.+..++||||+++|+|.++ +... ...+++..+..++.|++.||.||| + .+|+||||||+||++
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~i~H~dl~p~Nil~ 185 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIH---NEKNICHRDVKPSNILM 185 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHH---HTSCEECCCCCGGGEEE
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHh---ccCCEeecCCChHhEEE
Confidence 9999999999999999999999998 6542 357999999999999999999999 6 999999999999999
Q ss_pred CCCCcEEEeecccccccCCCCCcccccccccccccCccCCCCC-CCCc-chhHHHHHHHHHHHHhCCCCCCccccCcccH
Q 048430 814 DDDMVAHLGDFGIAKLLDGVDPVTQTMTLATIGYMAPEYGSEG-IVSI-SGDVYSFGILMMETFTRRKPTNEMFTGEMSL 891 (973)
Q Consensus 814 ~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~-~sDvws~Gvvl~elltg~~p~~~~~~~~~~~ 891 (973)
+.++.+||+|||.+...... ......+++.|+|||...+. .++. ++|||||||++|||++|+.||....... ..
T Consensus 186 ~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~ 261 (348)
T 2pml_X 186 DKNGRVKLSDFGESEYMVDK---KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLV-EL 261 (348)
T ss_dssp CTTSCEEECCCTTCEECBTT---EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSH-HH
T ss_pred cCCCcEEEeccccccccccc---cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHH-HH
Confidence 99999999999999875432 33445789999999988877 5665 9999999999999999999997533211 11
Q ss_pred HHHHHhhCCcchhhhccc-ccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 892 KQWVAESLPGAVTEVVDA-NLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 892 ~~~~~~~~~~~~~~~~d~-~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
...+ ..+......+. ...... ...........++.++.+++.+||+.||++||+++|+++|
T Consensus 262 ~~~i---~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~h 323 (348)
T 2pml_X 262 FNNI---RTKNIEYPLDRNHFLYPL--TNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKH 323 (348)
T ss_dssp HHHH---TSCCCCCCCSSSSSTTTT--CC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred HHHH---hccCcCCccchhhhhccc--cccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 1111 11110000000 000000 0000011113456779999999999999999999999985
No 250
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=1.4e-36 Score=346.07 Aligned_cols=270 Identities=20% Similarity=0.256 Sum_probs=203.3
Q ss_pred hcCCCCCccccccCceEEEEEEe-CCCeEEEEEEEeccchhhHHHHHHHHHHHHhcc--------CCceeEEEeeee---
Q 048430 679 TNGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQEDRALKSFDTECEVMRRIR--------HRNLIKIVSSCS--- 746 (973)
Q Consensus 679 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~--------h~niv~l~~~~~--- 746 (973)
.++|...++||+|+||.||+|+. .+++.||||+++.. ....+.+.+|++++++++ |+||+++++++.
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~ 114 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG 114 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence 36788999999999999999985 56899999999644 334567889999999986 788999999987
Q ss_pred -cCCeeEEEEEecCCCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHhhhcCCC-CeEEccCCCCcEEeCCCC------
Q 048430 747 -NPGFKALIMQYMPQGSLEKWLYSHN-YSLTIRQRLDIMIDVASALEYLHHGYST-PIIHCDLKPNNVLLDDDM------ 817 (973)
Q Consensus 747 -~~~~~~lv~e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~-~ivH~dlk~~Nill~~~~------ 817 (973)
.....++||||+ ++++.+++.... ..+++..++.++.||+.||+||| ++ +|+||||||+|||++.++
T Consensus 115 ~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH---~~~givHrDikp~NIll~~~~~~~~~~ 190 (397)
T 1wak_A 115 VNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLH---TKCRIIHTDIKPENILLSVNEQYIRRL 190 (397)
T ss_dssp TTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCEECCCCSGGGEEECCCHHHHHHH
T ss_pred CCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---HhCCEecCCCCHHHeeEeccchhhhhh
Confidence 567889999999 556666665543 57999999999999999999999 67 999999999999999775
Q ss_pred -------------------------------------------cEEEeecccccccCCCCCcccccccccccccCccCCC
Q 048430 818 -------------------------------------------VAHLGDFGIAKLLDGVDPVTQTMTLATIGYMAPEYGS 854 (973)
Q Consensus 818 -------------------------------------------~~kl~Dfgla~~~~~~~~~~~~~~~~~~~y~aPE~~~ 854 (973)
.+||+|||.++..... .....||+.|+|||.+.
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~----~~~~~gt~~y~aPE~~~ 266 (397)
T 1wak_A 191 AAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH----FTEDIQTRQYRSLEVLI 266 (397)
T ss_dssp HHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC----SCSCCSCGGGCCHHHHH
T ss_pred hhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc----CccCCCCCcccCChhhc
Confidence 7999999999875422 23456899999999998
Q ss_pred CCCCCcchhHHHHHHHHHHHHhCCCCCCccccCccc-----HHHHHHhhC--Ccch-------hhhccc--ccCCCCc--
Q 048430 855 EGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMS-----LKQWVAESL--PGAV-------TEVVDA--NLLSRED-- 916 (973)
Q Consensus 855 ~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~-----~~~~~~~~~--~~~~-------~~~~d~--~l~~~~~-- 916 (973)
+..++.++|||||||++|||++|+.||......+.. +........ +... ...+.. .+.....
T Consensus 267 ~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (397)
T 1wak_A 267 GSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLK 346 (397)
T ss_dssp TSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCC
T ss_pred CCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccC
Confidence 888999999999999999999999999764332221 111111111 0000 000000 0000000
Q ss_pred -----hhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 917 -----EEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 917 -----~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
.........+...+.++.+++.+||+.||++|||++|+++|
T Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 392 (397)
T 1wak_A 347 PWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRH 392 (397)
T ss_dssp CCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTS
T ss_pred CcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhC
Confidence 00001112234567889999999999999999999999976
No 251
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=1.7e-36 Score=347.24 Aligned_cols=197 Identities=21% Similarity=0.283 Sum_probs=171.8
Q ss_pred hcCCCCCccccccCceEEEEEEe-CCCeEEEEEEEeccchhhHHHHHHHHHHHHhc------cCCceeEEEeeeecCCee
Q 048430 679 TNGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQEDRALKSFDTECEVMRRI------RHRNLIKIVSSCSNPGFK 751 (973)
Q Consensus 679 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l------~h~niv~l~~~~~~~~~~ 751 (973)
..+|...++||+|+||.||+|.. .+++.||||+++... .....+.+|+++++.+ .|+||+++++++...+..
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~ 174 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHI 174 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEE
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc-chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeE
Confidence 45788899999999999999985 468999999997542 3346778899988887 467999999999999999
Q ss_pred EEEEEecCCCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCc--EEEeeccccc
Q 048430 752 ALIMQYMPQGSLEKWLYSHN-YSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMV--AHLGDFGIAK 828 (973)
Q Consensus 752 ~lv~e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~--~kl~Dfgla~ 828 (973)
++||||+. ++|.+++.... ..+++..+..++.||+.||+||| +.+|+||||||+||+++.++. +||+|||+++
T Consensus 175 ~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~ 250 (429)
T 3kvw_A 175 CMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALH---KNRIIHCDLKPENILLKQQGRSGIKVIDFGSSC 250 (429)
T ss_dssp EEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HHTEECSCCSGGGEEESSTTSCCEEECCCTTCE
T ss_pred EEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEEccCCCcceEEeecccce
Confidence 99999996 69999998765 45999999999999999999999 789999999999999999987 9999999997
Q ss_pred ccCCCCCcccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCcc
Q 048430 829 LLDGVDPVTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEM 884 (973)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~ 884 (973)
..... .....||+.|+|||.+.+..++.++|||||||++|||++|+.||...
T Consensus 251 ~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~ 302 (429)
T 3kvw_A 251 YEHQR----VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGE 302 (429)
T ss_dssp ETTCC----CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ecCCc----ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCC
Confidence 64321 23357899999999998888999999999999999999999998653
No 252
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=2.2e-36 Score=364.13 Aligned_cols=250 Identities=22% Similarity=0.250 Sum_probs=205.8
Q ss_pred HhcCCCCCccccccCceEEEEEEeC-CCeEEEEEEEecc---chhhHHHHHHHHHHHHhc-cCCceeEEEeeeecCCeeE
Q 048430 678 ATNGFGESNLLGSGSFDNVYKATLA-NGVSVAVKVFNLQ---EDRALKSFDTECEVMRRI-RHRNLIKIVSSCSNPGFKA 752 (973)
Q Consensus 678 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~ 752 (973)
..++|...++||+|+||.||+|+.. +++.||||+++.. .....+.+..|..++..+ +||+|+++++++.+.+..|
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~ 418 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 418 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence 4568899999999999999999954 6889999999754 233456788899999887 7999999999999999999
Q ss_pred EEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCC
Q 048430 753 LIMQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDG 832 (973)
Q Consensus 753 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~ 832 (973)
+||||+++|+|.+++...+ .+++..++.++.||+.||+||| +.+||||||||+|||++.++.+||+|||+++....
T Consensus 419 lV~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~ 494 (674)
T 3pfq_A 419 FVMEYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIW 494 (674)
T ss_dssp EEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTSEECCCCCSTTEEECSSSCEEECCCTTCEECCC
T ss_pred EEEeCcCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeEeccCChhhEEEcCCCcEEEeecceeecccc
Confidence 9999999999999998765 6999999999999999999999 78999999999999999999999999999986432
Q ss_pred CCCcccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhcccccC
Q 048430 833 VDPVTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLL 912 (973)
Q Consensus 833 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 912 (973)
.. .......||+.|+|||++....++.++|||||||++|||++|+.||..... ......... ..+.
T Consensus 495 ~~-~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~-----~~~~~~i~~--------~~~~ 560 (674)
T 3pfq_A 495 DG-VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE-----DELFQSIME--------HNVA 560 (674)
T ss_dssp TT-CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHHHHS--------SCCC
T ss_pred CC-cccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCH-----HHHHHHHHh--------CCCC
Confidence 22 233456799999999999999999999999999999999999999965321 111111111 1000
Q ss_pred CCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCH-----HHHHHH
Q 048430 913 SREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINV-----KDALAD 957 (973)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~-----~evl~~ 957 (973)
.+..++.++.+++.+||+.||++||++ +||++|
T Consensus 561 ------------~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h 598 (674)
T 3pfq_A 561 ------------YPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 598 (674)
T ss_dssp ------------CCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSS
T ss_pred ------------CCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcC
Confidence 011245678999999999999999997 777654
No 253
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=7.5e-37 Score=338.39 Aligned_cols=260 Identities=22% Similarity=0.331 Sum_probs=200.0
Q ss_pred CCHHHHHHHhcCCCCCccccccCceEEEEEEe-CCCeEEEEEEEeccchhhHHHHHHHHHHHHhc-cCCceeEEEeeeec
Q 048430 670 ISYHELQQATNGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQEDRALKSFDTECEVMRRI-RHRNLIKIVSSCSN 747 (973)
Q Consensus 670 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~ 747 (973)
+++.++....++|...+.||+|+||.||+|+. .+++.||||++..... ..+.+.+|+.+++++ +||||+++++++..
T Consensus 14 ~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 92 (326)
T 2x7f_A 14 IDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD-EEEEIKQEINMLKKYSHHRNIATYYGAFIK 92 (326)
T ss_dssp --CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS-TTHHHHHHHHHHHHHCCSTTBCCEEEEEEE
T ss_pred ccchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcc-cHHHHHHHHHHHHhccCCCCeeeeeeEEee
Confidence 34445555678899999999999999999996 5789999999875433 346788999999999 79999999999865
Q ss_pred ------CCeeEEEEEecCCCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEE
Q 048430 748 ------PGFKALIMQYMPQGSLEKWLYSHN-YSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAH 820 (973)
Q Consensus 748 ------~~~~~lv~e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~k 820 (973)
.+..++||||+++|+|.+++.... ..+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+|
T Consensus 93 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~k 169 (326)
T 2x7f_A 93 KNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVK 169 (326)
T ss_dssp CC--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTCCEE
T ss_pred ccCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCcHHHEEEcCCCCEE
Confidence 568899999999999999998753 46899999999999999999999 78999999999999999999999
Q ss_pred EeecccccccCCCCCcccccccccccccCccCCC-----CCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHH
Q 048430 821 LGDFGIAKLLDGVDPVTQTMTLATIGYMAPEYGS-----EGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWV 895 (973)
Q Consensus 821 l~Dfgla~~~~~~~~~~~~~~~~~~~y~aPE~~~-----~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~ 895 (973)
|+|||++....... .......|++.|+|||.+. ...++.++|||||||++|||++|+.||....... ....+
T Consensus 170 l~Dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~~~~ 246 (326)
T 2x7f_A 170 LVDFGVSAQLDRTV-GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMR--ALFLI 246 (326)
T ss_dssp ECCCTTTC--------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHH--HHHHH
T ss_pred EeeCcCceecCcCc-cccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHH--HHHHh
Confidence 99999988654321 2233456899999999876 5678999999999999999999999986532111 11111
Q ss_pred HhhCCcchhhhcccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 896 AESLPGAVTEVVDANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 896 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
.... .+... ...++..+.+++.+||+.||++||+++|+++|
T Consensus 247 ~~~~--------~~~~~-------------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 287 (326)
T 2x7f_A 247 PRNP--------APRLK-------------SKKWSKKFQSFIESCLVKNHSQRPATEQLMKH 287 (326)
T ss_dssp HHSC--------CCCCS-------------CSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred hcCc--------cccCC-------------ccccCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 1000 00000 01234568899999999999999999999986
No 254
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=2.7e-36 Score=338.89 Aligned_cols=272 Identities=25% Similarity=0.271 Sum_probs=203.7
Q ss_pred hcCCCCCccccccCceEEEEEEe-CCCeEEEEEEEeccc-hhhHHHHHHHHHHHHhccCCceeEEEeeeecC-----Cee
Q 048430 679 TNGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQE-DRALKSFDTECEVMRRIRHRNLIKIVSSCSNP-----GFK 751 (973)
Q Consensus 679 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~~ 751 (973)
.++|...+.||+|+||.||+|.. .+++.||||++.... ....+.+.+|++++++++||||+++++++... ...
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 105 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV 105 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence 45788999999999999999985 478999999987543 33457889999999999999999999998654 468
Q ss_pred EEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccC
Q 048430 752 ALIMQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLD 831 (973)
Q Consensus 752 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~ 831 (973)
++||||++ |+|.+++... .+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++...
T Consensus 106 ~iv~e~~~-~~L~~~l~~~--~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~ 179 (364)
T 3qyz_A 106 YIVQDLME-TDLYKLLKTQ--HLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 179 (364)
T ss_dssp EEEEECCS-EEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEEcccC-cCHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCChHhEEECCCCCEEEEeCcceEecC
Confidence 99999997 5999999875 5999999999999999999999 7899999999999999999999999999998764
Q ss_pred CCCCc--ccccccccccccCccCCC-CCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcc---hhh
Q 048430 832 GVDPV--TQTMTLATIGYMAPEYGS-EGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGA---VTE 905 (973)
Q Consensus 832 ~~~~~--~~~~~~~~~~y~aPE~~~-~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~---~~~ 905 (973)
..... ......||+.|+|||.+. ...++.++||||+||++|||++|+.||......+ .+........... +..
T Consensus 180 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~ 258 (364)
T 3qyz_A 180 PDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD-QLNHILGILGSPSQEDLNC 258 (364)
T ss_dssp GGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGG-HHHHHHHHHCSCCHHHHHT
T ss_pred CCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHH-HHHHHHHHhCCCCHHHHHH
Confidence 32211 123457999999999754 4558999999999999999999999997543221 2222221111110 000
Q ss_pred hcccc----cCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 906 VVDAN----LLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 906 ~~d~~----l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
..+.. ..................++.++.+++.+||+.||++|||++|+++|
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 314 (364)
T 3qyz_A 259 IINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314 (364)
T ss_dssp CCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred hhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00000 00000000000001112345678999999999999999999999975
No 255
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=1e-36 Score=336.39 Aligned_cols=267 Identities=21% Similarity=0.302 Sum_probs=197.4
Q ss_pred hcCCCCCccccccCceEEEEEEeC-CCeEEEEEEEeccchhhHHHHHHHHHHHHhccCCceeEEEeeee-----------
Q 048430 679 TNGFGESNLLGSGSFDNVYKATLA-NGVSVAVKVFNLQEDRALKSFDTECEVMRRIRHRNLIKIVSSCS----------- 746 (973)
Q Consensus 679 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~----------- 746 (973)
.++|...+.||+|+||.||+|... +++.||||++........+.+.+|++++++++||||+++++++.
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 89 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG 89 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence 357888999999999999999965 58999999998776666788999999999999999999998873
Q ss_pred ---cCCeeEEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeC-CCCcEEEe
Q 048430 747 ---NPGFKALIMQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLD-DDMVAHLG 822 (973)
Q Consensus 747 ---~~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~-~~~~~kl~ 822 (973)
+....++||||++ |+|.+++... .+++..+..++.|++.||+||| +.+|+||||||+||+++ +++.+||+
T Consensus 90 ~~~~~~~~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~kl~ 163 (320)
T 2i6l_A 90 SLTELNSVYIVQEYME-TDLANVLEQG--PLLEEHARLFMYQLLRGLKYIH---SANVLHRDLKPANLFINTEDLVLKIG 163 (320)
T ss_dssp -CCSCSEEEEEEECCS-EEHHHHHTTC--CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTTEEEEC
T ss_pred cccccCceeEEeeccC-CCHHHHhhcC--CccHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCeEEEc
Confidence 4467899999997 5999999754 5899999999999999999999 78999999999999997 56799999
Q ss_pred ecccccccCCCCC--cccccccccccccCccCCCC-CCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhC
Q 048430 823 DFGIAKLLDGVDP--VTQTMTLATIGYMAPEYGSE-GIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESL 899 (973)
Q Consensus 823 Dfgla~~~~~~~~--~~~~~~~~~~~y~aPE~~~~-~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 899 (973)
|||+++....... .......++..|+|||.... ..++.++|||||||++|||++|+.||......+ ....... ..
T Consensus 164 Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-~~~~~~~-~~ 241 (320)
T 2i6l_A 164 DFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELE-QMQLILE-SI 241 (320)
T ss_dssp CCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHH-HS
T ss_pred cCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHH-HHHHHHH-hc
Confidence 9999987643211 12233457899999997654 678999999999999999999999997532211 1111111 11
Q ss_pred Ccc----hhhhc-------ccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 900 PGA----VTEVV-------DANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 900 ~~~----~~~~~-------d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
+.. ..+.. ........ .........++.++.+++.+||+.||++||+++|+++|
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (320)
T 2i6l_A 242 PVVHEEDRQELLSVIPVYIRNDMTEPH----KPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSH 306 (320)
T ss_dssp CCCCHHHHHHHHTTSCHHHHHHTTSCC----CCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred CCCchhhhhhhhhcCcccccccccCCC----CChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCC
Confidence 110 00000 00000000 00001112356789999999999999999999999986
No 256
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=5.8e-37 Score=343.47 Aligned_cols=265 Identities=24% Similarity=0.267 Sum_probs=185.2
Q ss_pred hcCCCCCccccccCceEEEEEEe-CCCeEEEEEEEecc--chhhHHHHHHHHHHHHhccCCceeEEEeeeecC------C
Q 048430 679 TNGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQ--EDRALKSFDTECEVMRRIRHRNLIKIVSSCSNP------G 749 (973)
Q Consensus 679 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~ 749 (973)
.++|...+.||+|+||.||+|.. .+|+.||||++... .....+.+.+|+++++.++||||+++++++... .
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 107 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 107 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence 36788899999999999999984 57999999998643 233457788999999999999999999998654 5
Q ss_pred eeEEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccc
Q 048430 750 FKALIMQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKL 829 (973)
Q Consensus 750 ~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~ 829 (973)
..++|+|++ +++|.+++... .+++..+..++.||++||+||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 108 ~~~lv~e~~-~~~L~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kL~DFG~a~~ 181 (367)
T 2fst_X 108 DVYLVTHLM-GADLNNIVKCQ--KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH 181 (367)
T ss_dssp CCEEEEECC-CEECC-----C--CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECC------
T ss_pred eEEEEeccc-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHhhEEECCCCCEEEeecccccc
Confidence 679999999 67999998763 6999999999999999999999 79999999999999999999999999999986
Q ss_pred cCCCCCcccccccccccccCccCCCC-CCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhC-Cc-c-hhh
Q 048430 830 LDGVDPVTQTMTLATIGYMAPEYGSE-GIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESL-PG-A-VTE 905 (973)
Q Consensus 830 ~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~-~~-~-~~~ 905 (973)
... ......+|+.|+|||.+.+ ..++.++||||+||++|||++|+.||.+.... ..+........ +. . +..
T Consensus 182 ~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~l~~i~~~~g~p~~~~~~~ 256 (367)
T 2fst_X 182 TAD----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLILRLVGTPGAELLKK 256 (367)
T ss_dssp -------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCSCCHHHHTT
T ss_pred ccc----cCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCCHHHHHH
Confidence 532 1234578999999998776 67899999999999999999999999653211 11111111111 10 0 000
Q ss_pred hcc-------cccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 906 VVD-------ANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 906 ~~d-------~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
+.. ..+...... ........+++++.+++.+||+.||++|||++|+++|
T Consensus 257 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 257 ISSESARNYIQSLTQMPKM---NFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp CCCHHHHHHHHTSCCCCCC---CHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hhhHHHHHHHhccCCCCCC---CHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 000 000000000 0000111245678999999999999999999999986
No 257
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=2e-36 Score=335.08 Aligned_cols=270 Identities=24% Similarity=0.327 Sum_probs=203.5
Q ss_pred HhcCCCCCccccccCceEEEEEEe--CCCeEEEEEEEeccch--hhHHHHHHHHHHHHhc---cCCceeEEEeeee----
Q 048430 678 ATNGFGESNLLGSGSFDNVYKATL--ANGVSVAVKVFNLQED--RALKSFDTECEVMRRI---RHRNLIKIVSSCS---- 746 (973)
Q Consensus 678 ~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l---~h~niv~l~~~~~---- 746 (973)
+.++|...+.||+|+||.||+|+. .+++.||||+++.... .....+.+|+.+++.+ +||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 457899999999999999999996 4689999999865432 2234566788777766 8999999999986
Q ss_pred -cCCeeEEEEEecCCCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeec
Q 048430 747 -NPGFKALIMQYMPQGSLEKWLYSHN-YSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDF 824 (973)
Q Consensus 747 -~~~~~~lv~e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 824 (973)
.....++||||++ |+|.+++.... ..+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+||
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~gi~H~dlkp~Nili~~~~~~kl~Df 164 (326)
T 1blx_A 89 DRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADF 164 (326)
T ss_dssp SSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECSC
T ss_pred CCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCCHHHeEEcCCCCEEEecC
Confidence 5678899999997 59999998754 35899999999999999999999 789999999999999999999999999
Q ss_pred ccccccCCCCCcccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhC-Ccc-
Q 048430 825 GIAKLLDGVDPVTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESL-PGA- 902 (973)
Q Consensus 825 gla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~-~~~- 902 (973)
|+++.... ........+++.|+|||...+..++.++|||||||++|||++|+.||...... ..+...+.... +..
T Consensus 165 g~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~~~~i~~~~~~~~~~ 241 (326)
T 1blx_A 165 GLARIYSF--QMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV-DQLGKILDVIGLPGEE 241 (326)
T ss_dssp CSCCCCCG--GGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCCCCGG
T ss_pred cccccccC--CCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHH-HHHHHHHHHcCCCCcc
Confidence 99986542 12233456899999999998889999999999999999999999998753221 11122221111 100
Q ss_pred -hhhhc---ccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 903 -VTEVV---DANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 903 -~~~~~---d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
+.... ........ ... .......++..+.+++.+||+.||++||++.|+++|
T Consensus 242 ~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 297 (326)
T 1blx_A 242 DWPRDVALPRQAFHSKS-AQP--IEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 297 (326)
T ss_dssp GSCTTCSSCGGGSCCCC-CCC--GGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred cCccccccchhhhcccC-cch--hhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 00000 00000000 000 001112356778999999999999999999999975
No 258
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=2.1e-36 Score=342.81 Aligned_cols=267 Identities=22% Similarity=0.278 Sum_probs=195.9
Q ss_pred cCCCCCccccccCceEEEEEEeCCCeEEEEEEEeccchhhHHHHHHHHHHHHhccCCceeEEEeeeecCC------eeEE
Q 048430 680 NGFGESNLLGSGSFDNVYKATLANGVSVAVKVFNLQEDRALKSFDTECEVMRRIRHRNLIKIVSSCSNPG------FKAL 753 (973)
Q Consensus 680 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------~~~l 753 (973)
.+|...++||+|+||.||+|+...+..||+|++..... ...+|+++++.++||||+++++++...+ ..++
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l 115 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNL 115 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEE
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEE
Confidence 46888899999999999999987777799998764432 2237999999999999999999985433 3789
Q ss_pred EEEecCCCCHHHHhh---hCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeC-CCCcEEEeecccccc
Q 048430 754 IMQYMPQGSLEKWLY---SHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLD-DDMVAHLGDFGIAKL 829 (973)
Q Consensus 754 v~e~~~~gsL~~~l~---~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~-~~~~~kl~Dfgla~~ 829 (973)
||||++++ +.+.+. .....+++..+..++.||++||+||| +.+|+||||||+||+++ .++.+||+|||+++.
T Consensus 116 v~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~ 191 (394)
T 4e7w_A 116 VLEYVPET-VYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIH---SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKI 191 (394)
T ss_dssp EEECCSEE-HHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred EeeccCcc-HHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHEEEcCCCCcEEEeeCCCccc
Confidence 99999874 443332 22357999999999999999999999 79999999999999999 799999999999987
Q ss_pred cCCCCCcccccccccccccCccCCCCC-CCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCc--chhhh
Q 048430 830 LDGVDPVTQTMTLATIGYMAPEYGSEG-IVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPG--AVTEV 906 (973)
Q Consensus 830 ~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~ 906 (973)
..... ......+|+.|+|||.+.+. .++.++||||+||++|||++|+.||.+.... ..+...+...... .....
T Consensus 192 ~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~-~~l~~i~~~~g~p~~~~~~~ 268 (394)
T 4e7w_A 192 LIAGE--PNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGI-DQLVEIIKVLGTPSREQIKT 268 (394)
T ss_dssp CCTTC--CCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCCCCHHHHHH
T ss_pred ccCCC--CCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCCHHHHHh
Confidence 64322 23345789999999987654 5899999999999999999999999753221 1222222221111 11111
Q ss_pred cccccCCCCchh---hhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 907 VDANLLSREDEE---DADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 907 ~d~~l~~~~~~~---~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
.++......... .......+..+++++.+++.+||+.||++|||+.|+++|
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 322 (394)
T 4e7w_A 269 MNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH 322 (394)
T ss_dssp HCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred hChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcC
Confidence 111111110000 000011112356789999999999999999999999986
No 259
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=3.4e-36 Score=330.91 Aligned_cols=254 Identities=22% Similarity=0.345 Sum_probs=198.1
Q ss_pred HHhcCCCCCccccccCceEEEEEEeCCCeEEEEEEEeccc--hhhHHHHHHHHHHHHhcc--CCceeEEEeeeecCCeeE
Q 048430 677 QATNGFGESNLLGSGSFDNVYKATLANGVSVAVKVFNLQE--DRALKSFDTECEVMRRIR--HRNLIKIVSSCSNPGFKA 752 (973)
Q Consensus 677 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~--h~niv~l~~~~~~~~~~~ 752 (973)
...++|...+.||+|+||.||+|...+++.||||++.... ....+.+.+|+.++++++ ||||+++++++...+..+
T Consensus 25 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~ 104 (313)
T 3cek_A 25 VKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIY 104 (313)
T ss_dssp ETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEE
T ss_pred eccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEE
Confidence 3456788899999999999999998889999999987543 345678999999999997 599999999999999999
Q ss_pred EEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCC
Q 048430 753 LIMQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDG 832 (973)
Q Consensus 753 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~ 832 (973)
+||| +.+++|.+++.... .+++.++..++.|++.||.||| +.+|+||||||+||++++ +.+||+|||++.....
T Consensus 105 lv~e-~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~ 178 (313)
T 3cek_A 105 MVME-CGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQP 178 (313)
T ss_dssp EEEC-CCSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEET-TEEEECCCSSSCC---
T ss_pred EEEe-cCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcccEEEEC-CeEEEeeccccccccC
Confidence 9999 56789999998765 7899999999999999999999 789999999999999965 8999999999987643
Q ss_pred CCCc-ccccccccccccCccCCCC-----------CCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCC
Q 048430 833 VDPV-TQTMTLATIGYMAPEYGSE-----------GIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLP 900 (973)
Q Consensus 833 ~~~~-~~~~~~~~~~y~aPE~~~~-----------~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 900 (973)
.... ......|++.|+|||.... ..++.++|||||||++|||++|+.||............
T Consensus 179 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~------- 251 (313)
T 3cek_A 179 DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHA------- 251 (313)
T ss_dssp -----------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHH-------
T ss_pred ccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHH-------
Confidence 2221 2234568999999998764 47889999999999999999999998653322111111
Q ss_pred cchhhhcccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 048430 901 GAVTEVVDANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADL 958 (973)
Q Consensus 901 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L 958 (973)
..+....... +..++.++.+++.+||+.||++||+++|++++-
T Consensus 252 -----~~~~~~~~~~----------~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~ 294 (313)
T 3cek_A 252 -----IIDPNHEIEF----------PDIPEKDLQDVLKCCLKRDPKQRISIPELLAHP 294 (313)
T ss_dssp -----HHCTTSCCCC----------CCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred -----HHhcccccCC----------cccchHHHHHHHHHHccCCcccCcCHHHHhcCc
Confidence 1111110000 011245688999999999999999999999874
No 260
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=3.5e-36 Score=343.84 Aligned_cols=267 Identities=23% Similarity=0.272 Sum_probs=195.6
Q ss_pred cCCCCCccccccCceEEEEEEeC-CCeEEEEEEEeccchhhHHHHHHHHHHHHhccCCceeEEEeeeec------CCeeE
Q 048430 680 NGFGESNLLGSGSFDNVYKATLA-NGVSVAVKVFNLQEDRALKSFDTECEVMRRIRHRNLIKIVSSCSN------PGFKA 752 (973)
Q Consensus 680 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~------~~~~~ 752 (973)
.+|...+.||+|+||.||+|+.. +++.||||++..... ...+|++++++++||||++++++|.. ....+
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~ 129 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN 129 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch----hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEE
Confidence 35778899999999999999974 699999999865432 23479999999999999999998843 12367
Q ss_pred EEEEecCCCCHHHHhhh---CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCC-CcEEEeeccccc
Q 048430 753 LIMQYMPQGSLEKWLYS---HNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDD-MVAHLGDFGIAK 828 (973)
Q Consensus 753 lv~e~~~~gsL~~~l~~---~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~-~~~kl~Dfgla~ 828 (973)
+||||+++ ++.+.+.. ....+++..+..++.||++||+||| +.+|+||||||+|||++.+ +.+||+|||+++
T Consensus 130 lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~ 205 (420)
T 1j1b_A 130 LVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 205 (420)
T ss_dssp EEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred eehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChhhEEEeCCCCeEEeccchhhh
Confidence 89999976 66666542 3457999999999999999999999 8999999999999999965 578999999998
Q ss_pred ccCCCCCcccccccccccccCccCCCCC-CCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcch--hh
Q 048430 829 LLDGVDPVTQTMTLATIGYMAPEYGSEG-IVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAV--TE 905 (973)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~--~~ 905 (973)
...... ......+|+.|+|||.+.+. .++.++|||||||++|||++|+.||..... ...+...+........ ..
T Consensus 206 ~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~-~~~l~~i~~~lg~p~~~~~~ 282 (420)
T 1j1b_A 206 QLVRGE--PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG-VDQLVEIIKVLGTPTREQIR 282 (420)
T ss_dssp ECCTTC--CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHHHCSCCHHHHH
T ss_pred hcccCC--CceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHhCCCCHHHHH
Confidence 764322 22345789999999987654 789999999999999999999999975321 1222233322111110 01
Q ss_pred hcccccCCCCchhh-hh--hHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 906 VVDANLLSREDEED-AD--DFATKKTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 906 ~~d~~l~~~~~~~~-~~--~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
..++.......... .. ....+...+.++.+|+.+||+.||++||++.|+++|
T Consensus 283 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~h 337 (420)
T 1j1b_A 283 EMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 337 (420)
T ss_dssp HHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCC
Confidence 11111111100000 00 000112345779999999999999999999999976
No 261
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=2.5e-36 Score=344.35 Aligned_cols=270 Identities=20% Similarity=0.240 Sum_probs=183.7
Q ss_pred CCC-CccccccCceEEEEEEeC---CCeEEEEEEEeccchhhHHHHHHHHHHHHhccCCceeEEEeee--ecCCeeEEEE
Q 048430 682 FGE-SNLLGSGSFDNVYKATLA---NGVSVAVKVFNLQEDRALKSFDTECEVMRRIRHRNLIKIVSSC--SNPGFKALIM 755 (973)
Q Consensus 682 ~~~-~~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~--~~~~~~~lv~ 755 (973)
|.. .++||+|+||.||+|+.. +++.||||++..... ...+.+|+.++++++||||+++++++ ......++||
T Consensus 22 y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~ 99 (405)
T 3rgf_A 22 FEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI--SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLF 99 (405)
T ss_dssp EECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC--CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEE
T ss_pred hhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC--CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEE
Confidence 444 458999999999999965 578999999864432 35688999999999999999999999 4477899999
Q ss_pred EecCCCCHHHHhhhCC--------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEe----CCCCcEEEee
Q 048430 756 QYMPQGSLEKWLYSHN--------YSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLL----DDDMVAHLGD 823 (973)
Q Consensus 756 e~~~~gsL~~~l~~~~--------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill----~~~~~~kl~D 823 (973)
||+++ +|.+++.... ..+++..++.++.||+.||+||| +.+|+||||||+||++ +.++.+||+|
T Consensus 100 e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kl~D 175 (405)
T 3rgf_A 100 DYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKIAD 175 (405)
T ss_dssp ECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECCSSTTTTCEEECC
T ss_pred eCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCEeCCCcCHHHeEEecCCCCCCcEEEEE
Confidence 99964 8888876321 24899999999999999999999 7899999999999999 7788999999
Q ss_pred cccccccCCCCC--cccccccccccccCccCCCC-CCCCcchhHHHHHHHHHHHHhCCCCCCccccCc--------ccHH
Q 048430 824 FGIAKLLDGVDP--VTQTMTLATIGYMAPEYGSE-GIVSISGDVYSFGILMMETFTRRKPTNEMFTGE--------MSLK 892 (973)
Q Consensus 824 fgla~~~~~~~~--~~~~~~~~~~~y~aPE~~~~-~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~--------~~~~ 892 (973)
||+++....... .......||+.|+|||.+.+ ..++.++|||||||++|||++|+.||....... ..+.
T Consensus 176 fg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~ 255 (405)
T 3rgf_A 176 MGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLD 255 (405)
T ss_dssp TTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHH
T ss_pred CCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHH
Confidence 999987643221 22334578999999998776 458999999999999999999999996533210 1112
Q ss_pred HHHHhhC-Cc--chhhhcc--------cccCCCC-chhhhhhH--HhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 893 QWVAESL-PG--AVTEVVD--------ANLLSRE-DEEDADDF--ATKKTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 893 ~~~~~~~-~~--~~~~~~d--------~~l~~~~-~~~~~~~~--~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
..+.... +. .+..+.. ..+.... ........ ......+.++.+|+.+||+.||++|||++|+++|
T Consensus 256 ~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~h 334 (405)
T 3rgf_A 256 RIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQD 334 (405)
T ss_dssp HHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 2221111 00 0100000 0000000 00000000 0000114568899999999999999999999986
No 262
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=1.6e-35 Score=324.39 Aligned_cols=250 Identities=21% Similarity=0.302 Sum_probs=198.2
Q ss_pred hcCCCCCccccccCceEEEEEEe-CCCeEEEEEEEeccc----hhhHHHHHHHHHHHHhccCCceeEEEeee--ecCCee
Q 048430 679 TNGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQE----DRALKSFDTECEVMRRIRHRNLIKIVSSC--SNPGFK 751 (973)
Q Consensus 679 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~h~niv~l~~~~--~~~~~~ 751 (973)
.++|...+.||+|+||.||+|.. .+++.||+|+++... ....+.+.+|+.++++++||||+++++++ .+....
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 47899999999999999999996 478999999997543 23457899999999999999999999998 445688
Q ss_pred EEEEEecCCCCHHHHhhhC-CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeeccccccc
Q 048430 752 ALIMQYMPQGSLEKWLYSH-NYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLL 830 (973)
Q Consensus 752 ~lv~e~~~~gsL~~~l~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~ 830 (973)
++||||++++ +.+++... ...+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||.+...
T Consensus 84 ~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH---~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~ 159 (305)
T 2wtk_C 84 YMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLH---SQGIVHKDIKPGNLLLTTGGTLKISALGVAEAL 159 (305)
T ss_dssp EEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCcccEEEcCCCcEEeecccccccc
Confidence 9999999876 77777653 346999999999999999999999 789999999999999999999999999999876
Q ss_pred CCCC-CcccccccccccccCccCCCCCC--CCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhc
Q 048430 831 DGVD-PVTQTMTLATIGYMAPEYGSEGI--VSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVV 907 (973)
Q Consensus 831 ~~~~-~~~~~~~~~~~~y~aPE~~~~~~--~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (973)
.... ........|++.|+|||...... ++.++|||||||++|||++|+.||.... .........
T Consensus 160 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----~~~~~~~i~-------- 226 (305)
T 2wtk_C 160 HPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDN-----IYKLFENIG-------- 226 (305)
T ss_dssp CTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSS-----HHHHHHHHH--------
T ss_pred CccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCch-----HHHHHHHHh--------
Confidence 4322 22233456899999999876543 4789999999999999999999986521 111111100
Q ss_pred ccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 908 DANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 908 d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
.... ..+..++..+.+++.+||+.||++||+++|+++|
T Consensus 227 ~~~~------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 227 KGSY------------AIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp HCCC------------CCCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred cCCC------------CCCCccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 0000 0011245668899999999999999999999987
No 263
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=3.6e-36 Score=336.94 Aligned_cols=272 Identities=23% Similarity=0.239 Sum_probs=201.4
Q ss_pred hcCCCCCccccccCceEEEEEEeC-CCeEEEEEEEeccc-hhhHHHHHHHHHHHHhccCCceeEEEeeeecC-----Cee
Q 048430 679 TNGFGESNLLGSGSFDNVYKATLA-NGVSVAVKVFNLQE-DRALKSFDTECEVMRRIRHRNLIKIVSSCSNP-----GFK 751 (973)
Q Consensus 679 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~~ 751 (973)
.++|...+.||+|+||.||+|+.. +|+.||||++.... ......+.+|+.++++++||||+++++++... ...
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 89 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV 89 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence 467888999999999999999964 78999999986443 33456788999999999999999999987653 678
Q ss_pred EEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccC
Q 048430 752 ALIMQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLD 831 (973)
Q Consensus 752 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~ 831 (973)
++||||+. ++|.+++... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++...
T Consensus 90 ~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~ 163 (353)
T 2b9h_A 90 YIIQELMQ-TDLHRVISTQ--MLSDDHIQYFIYQTLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIID 163 (353)
T ss_dssp EEEECCCS-EEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEEeccC-ccHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEEcCCCcEEEEecccccccc
Confidence 99999997 5999999874 5999999999999999999999 7899999999999999999999999999998764
Q ss_pred CCCCc---------ccccccccccccCccCCC-CCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhC-C
Q 048430 832 GVDPV---------TQTMTLATIGYMAPEYGS-EGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESL-P 900 (973)
Q Consensus 832 ~~~~~---------~~~~~~~~~~y~aPE~~~-~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~-~ 900 (973)
..... ......||+.|+|||.+. ...++.++|||||||++|||++|+.||......+ .+........ +
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~ 242 (353)
T 2b9h_A 164 ESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRH-QLLLIFGIIGTP 242 (353)
T ss_dssp ----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCC
T ss_pred cccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHH-HHHHHHHHhCCC
Confidence 32211 112346899999999754 4678999999999999999999999997532111 1111111110 0
Q ss_pred c--c-hhhhcccc----cCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 901 G--A-VTEVVDAN----LLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 901 ~--~-~~~~~d~~----l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
. . ........ ..................++.++.+++.+||+.||++|||++|+++|
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (353)
T 2b9h_A 243 HSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH 306 (353)
T ss_dssp CSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred chhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 0 0 00000000 00000000000001112456788999999999999999999999986
No 264
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=6.5e-37 Score=337.81 Aligned_cols=261 Identities=23% Similarity=0.330 Sum_probs=201.3
Q ss_pred HHHhcCCCCCccccccCceEEEEEEeCCCeEEEEEEEeccc--hhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEE
Q 048430 676 QQATNGFGESNLLGSGSFDNVYKATLANGVSVAVKVFNLQE--DRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKAL 753 (973)
Q Consensus 676 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 753 (973)
....++|...+.||+|+||.||+|+... .||+|+++... ....+.+.+|+.++++++||||+++++++.+.+..++
T Consensus 29 ~i~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~i 106 (319)
T 2y4i_B 29 DIPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAI 106 (319)
T ss_dssp SSCCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEE
T ss_pred cCCHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEE
Confidence 3345778889999999999999999764 49999986542 2234567889999999999999999999999999999
Q ss_pred EEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCC
Q 048430 754 IMQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGV 833 (973)
Q Consensus 754 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 833 (973)
||||+++++|.+++...+..+++.++..++.|++.||+||| +.+|+||||||+||+++ ++.+||+|||++......
T Consensus 107 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~ 182 (319)
T 2y4i_B 107 ITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLH---AKGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVL 182 (319)
T ss_dssp ECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHH---HTTCCCCCCCSTTEEEC---CCEECCCSCCC-----
T ss_pred EeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCccccCCChhhEEEe-CCCEEEeecCCccccccc
Confidence 99999999999999887667999999999999999999999 78999999999999998 679999999998764321
Q ss_pred C----CcccccccccccccCccCCCC---------CCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCC
Q 048430 834 D----PVTQTMTLATIGYMAPEYGSE---------GIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLP 900 (973)
Q Consensus 834 ~----~~~~~~~~~~~~y~aPE~~~~---------~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 900 (973)
. ........|++.|+|||.... ..++.++|||||||++|||++|+.||...... ........
T Consensus 183 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-----~~~~~~~~ 257 (319)
T 2y4i_B 183 QAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAE-----AIIWQMGT 257 (319)
T ss_dssp -----CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHH-----HHHHHHHT
T ss_pred cccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHhcc
Confidence 1 112233458999999997653 45799999999999999999999998653211 11111111
Q ss_pred cchhhhcccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHHHH
Q 048430 901 GAVTEVVDANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIKKIL 965 (973)
Q Consensus 901 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~~~~ 965 (973)
+. .+.... ..++.++.+++.+||+.||++||++.|+++.|+++.+..
T Consensus 258 ~~-----~~~~~~-------------~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~ 304 (319)
T 2y4i_B 258 GM-----KPNLSQ-------------IGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRN 304 (319)
T ss_dssp TC-----CCCCCC-------------SSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC----
T ss_pred CC-----CCCCCc-------------CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhh
Confidence 10 000000 012345889999999999999999999999999887654
No 265
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=1.1e-35 Score=330.88 Aligned_cols=269 Identities=21% Similarity=0.282 Sum_probs=204.4
Q ss_pred hcCCCCCccccccCceEEEEEEe--CCCeEEEEEEEeccchhhHHHHHHHHHHHHhccCCc------eeEEEeeeecCCe
Q 048430 679 TNGFGESNLLGSGSFDNVYKATL--ANGVSVAVKVFNLQEDRALKSFDTECEVMRRIRHRN------LIKIVSSCSNPGF 750 (973)
Q Consensus 679 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n------iv~l~~~~~~~~~ 750 (973)
.++|...+.||+|+||.||+|.. .+++.||||+++.. ....+.+.+|+++++.++|++ ++++++++...+.
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~ 91 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGH 91 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTE
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCc
Confidence 35788899999999999999986 36899999998644 334567889999999987654 9999999999999
Q ss_pred eEEEEEecCCCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCC--------------
Q 048430 751 KALIMQYMPQGSLEKWLYSHN-YSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDD-------------- 815 (973)
Q Consensus 751 ~~lv~e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~-------------- 815 (973)
.++||||+ +++|.+++.... ..+++.++..++.|++.||+||| +.+|+||||||+||+++.
T Consensus 92 ~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~ 167 (339)
T 1z57_A 92 ICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLH---SNKLTHTDLKPENILFVQSDYTEAYNPKIKRD 167 (339)
T ss_dssp EEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCCCEEEEEC----CE
T ss_pred EEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHEEEeccccccccCCccccc
Confidence 99999999 889999998765 36899999999999999999999 789999999999999987
Q ss_pred -----CCcEEEeecccccccCCCCCcccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCccc
Q 048430 816 -----DMVAHLGDFGIAKLLDGVDPVTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMS 890 (973)
Q Consensus 816 -----~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~ 890 (973)
++.+||+|||+++..... .....||+.|+|||.+.+..++.++|||||||++|||++|+.||......+ .
T Consensus 168 ~~~~~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-~ 242 (339)
T 1z57_A 168 ERTLINPDIKVVDFGSATYDDEH----HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKE-H 242 (339)
T ss_dssp EEEESCCCEEECCCSSCEETTSC----CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHH-H
T ss_pred cccccCCCceEeeCcccccCccc----cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHH-H
Confidence 668999999999865322 234568999999999988899999999999999999999999996532211 1
Q ss_pred HHHHHHhh--CCcchhhhcc-------cccCCCCchhh-----------hhhHHhHHHHHHHHHHHHHhccccCCCCCCC
Q 048430 891 LKQWVAES--LPGAVTEVVD-------ANLLSREDEED-----------ADDFATKKTCISYIMSLALKCSAEIPEERIN 950 (973)
Q Consensus 891 ~~~~~~~~--~~~~~~~~~d-------~~l~~~~~~~~-----------~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt 950 (973)
........ .+..+..... ....-...... .........+++++.+++.+||+.||++|||
T Consensus 243 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt 322 (339)
T 1z57_A 243 LAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRIT 322 (339)
T ss_dssp HHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCC
T ss_pred HHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccC
Confidence 11111111 1111100000 00000000000 0000112245678999999999999999999
Q ss_pred HHHHHHH
Q 048430 951 VKDALAD 957 (973)
Q Consensus 951 ~~evl~~ 957 (973)
++|+++|
T Consensus 323 ~~ell~h 329 (339)
T 1z57_A 323 LREALKH 329 (339)
T ss_dssp HHHHTTS
T ss_pred HHHHhcC
Confidence 9999976
No 266
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=2.9e-36 Score=339.30 Aligned_cols=264 Identities=22% Similarity=0.255 Sum_probs=198.7
Q ss_pred hcCCCCCccccccCceEEEEEEe-CCCeEEEEEEEeccc--hhhHHHHHHHHHHHHhccCCceeEEEeeeecCCee----
Q 048430 679 TNGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQE--DRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFK---- 751 (973)
Q Consensus 679 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~---- 751 (973)
.++|...+.||+|+||.||+|.. .+|+.||||++.... ....+.+.+|+.+++.++||||+++++++...+..
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 120 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 120 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence 46788889999999999999985 479999999987542 33457888999999999999999999999876654
Q ss_pred --EEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccc
Q 048430 752 --ALIMQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKL 829 (973)
Q Consensus 752 --~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~ 829 (973)
++||||+. ++|.+++.. .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 121 ~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~ 193 (371)
T 4exu_A 121 DFYLVMPFMQ-TDLQKIMGM---EFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLARH 193 (371)
T ss_dssp CCEEEEECCC-EEHHHHTTS---CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECSTTCC--
T ss_pred eEEEEEcccc-ccHHHHhhc---CCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCcCHHHeEECCCCCEEEEecCcccc
Confidence 99999997 589888743 4899999999999999999999 78999999999999999999999999999986
Q ss_pred cCCCCCcccccccccccccCccCCCC-CCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhC-C-cchhhh
Q 048430 830 LDGVDPVTQTMTLATIGYMAPEYGSE-GIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESL-P-GAVTEV 906 (973)
Q Consensus 830 ~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~-~-~~~~~~ 906 (973)
... ......+|+.|+|||.+.+ ..++.++|||||||++|||++|+.||...... ..+........ + ......
T Consensus 194 ~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~ 268 (371)
T 4exu_A 194 ADA----EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYL-DQLTQILKVTGVPGTEFVQK 268 (371)
T ss_dssp ----------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCCCCHHHHTT
T ss_pred ccc----CcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCCCcHHHHHH
Confidence 542 2234568999999998776 67899999999999999999999999753211 11122211111 0 000000
Q ss_pred cc--------cccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 907 VD--------ANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 907 ~d--------~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
++ ..+..... .........+++++.+++.+||+.||++|||++|+++|
T Consensus 269 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 269 LNDKAAKSYIQSLPQTPR---KDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp CSCHHHHHHHHHSCCCCC---CCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred hhhhhhhhhhhccCCCcc---hhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 00 00000000 00011112346789999999999999999999999986
No 267
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=9.5e-36 Score=323.02 Aligned_cols=252 Identities=21% Similarity=0.290 Sum_probs=203.3
Q ss_pred HhcCCCCCccccccCceEEEEEEeC-CCeEEEEEEEeccc--hhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEE
Q 048430 678 ATNGFGESNLLGSGSFDNVYKATLA-NGVSVAVKVFNLQE--DRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALI 754 (973)
Q Consensus 678 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 754 (973)
..++|...+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 20 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 99 (287)
T 2wei_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (287)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEE
Confidence 3467999999999999999999965 78999999987543 23457899999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCC---CcEEEeecccccccC
Q 048430 755 MQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDD---MVAHLGDFGIAKLLD 831 (973)
Q Consensus 755 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~---~~~kl~Dfgla~~~~ 831 (973)
|||+++++|.+++.... .+++.++..++.|++.||.||| +.+|+||||||+||+++.+ +.+||+|||++....
T Consensus 100 ~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~ 175 (287)
T 2wei_A 100 GELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ 175 (287)
T ss_dssp ECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBC
T ss_pred EEccCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCChhhEEEecCCCcccEEEeccCcceeec
Confidence 99999999999887654 6899999999999999999999 7899999999999999764 479999999998764
Q ss_pred CCCCcccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhccccc
Q 048430 832 GVDPVTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANL 911 (973)
Q Consensus 832 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 911 (973)
... ......+++.|+|||...+ .++.++||||||+++|+|++|+.||...... .....+.... .
T Consensus 176 ~~~--~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~~~~~~~~~~-----------~ 239 (287)
T 2wei_A 176 QNT--KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY--DILKRVETGK-----------Y 239 (287)
T ss_dssp CCS--SCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHCC-----------C
T ss_pred CCC--ccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHH--HHHHHHHcCC-----------C
Confidence 322 2233458999999998765 4899999999999999999999998653211 1111111100 0
Q ss_pred CCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 912 LSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
... ......++.++.+++.+||+.||++||+++|++++
T Consensus 240 ~~~--------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 277 (287)
T 2wei_A 240 AFD--------LPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (287)
T ss_dssp CCC--------SGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred CCC--------chhhhhcCHHHHHHHHHHcccChhhCcCHHHHhcC
Confidence 000 00112345678999999999999999999999986
No 268
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=4.8e-36 Score=328.18 Aligned_cols=252 Identities=22% Similarity=0.305 Sum_probs=193.3
Q ss_pred hcCCCCCccccccCceEEEEEEe-CCCeEEEEEEEeccchhhHHHHHHHHHHHHhccCCceeEEEeeeec----------
Q 048430 679 TNGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQEDRALKSFDTECEVMRRIRHRNLIKIVSSCSN---------- 747 (973)
Q Consensus 679 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~---------- 747 (973)
.++|...+.||+|+||.||+|+. .+++.||||++... ....+.+.+|+.++++++||||+++++++.+
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTA 83 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC----
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcc
Confidence 45688899999999999999996 47999999998643 3445788999999999999999999998754
Q ss_pred ---CCeeEEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeec
Q 048430 748 ---PGFKALIMQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDF 824 (973)
Q Consensus 748 ---~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 824 (973)
.+..++||||+++|+|.+++......+++..++.++.|++.||+||| +.+|+||||||+||+++.++.+||+||
T Consensus 84 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dlkp~Nil~~~~~~~kl~df 160 (303)
T 1zy4_A 84 VKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDF 160 (303)
T ss_dssp --CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCC
T ss_pred cccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHH---hCCeecccCCHHhEEEcCCCCEEEeeC
Confidence 45779999999999999999987767889999999999999999999 789999999999999999999999999
Q ss_pred ccccccCCCC-------------CcccccccccccccCccCCCCC-CCCcchhHHHHHHHHHHHHhCCCCCCccccCccc
Q 048430 825 GIAKLLDGVD-------------PVTQTMTLATIGYMAPEYGSEG-IVSISGDVYSFGILMMETFTRRKPTNEMFTGEMS 890 (973)
Q Consensus 825 gla~~~~~~~-------------~~~~~~~~~~~~y~aPE~~~~~-~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~ 890 (973)
|.+....... ........|++.|+|||.+.+. .++.++|||||||++|||++ ||......
T Consensus 161 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~~--- 234 (303)
T 1zy4_A 161 GLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMER--- 234 (303)
T ss_dssp CCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHHH---
T ss_pred cchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchhH---
Confidence 9998654221 1122345689999999987754 78999999999999999998 54321111
Q ss_pred HHHHHHhhCCcchhhhcccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 891 LKQWVAESLPGAVTEVVDANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 891 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
.......... ....... .+..++..+.+++.+||+.||++|||++|+++|
T Consensus 235 -~~~~~~~~~~------~~~~~~~----------~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 284 (303)
T 1zy4_A 235 -VNILKKLRSV------SIEFPPD----------FDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNS 284 (303)
T ss_dssp -HHHHHHHHST------TCCCCTT----------CCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred -HHHHHhcccc------ccccCcc----------ccccchHHHHHHHHHHHhcCcccCcCHHHHhCC
Confidence 1111110000 0000000 011234568899999999999999999999986
No 269
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=8.5e-35 Score=348.49 Aligned_cols=311 Identities=19% Similarity=0.204 Sum_probs=200.2
Q ss_pred CCCCCCcEEEecCCCCCCCCCcccccccCCcEEEccCCCCCCCCCccccCCCCCccEEEeeCcccCCCCCccccCCCCCC
Q 048430 66 GNLSFLVSLNISGNSFYDTLPNELWHMRRLKIIDFSSNSLSGSLPGDMCNSFTQLESFDVSSNKITGEFPSAIVNISSLK 145 (973)
Q Consensus 66 ~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 145 (973)
..+.+++.|++++|.+.+..+..++.+++|++|+|++|.+. .+|...|..+++|++|+|++|.+++..|..|+++++|+
T Consensus 48 l~l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 126 (597)
T 3oja_B 48 ITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIE-EIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLT 126 (597)
T ss_dssp GGGCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCC-EECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCC
T ss_pred ccCCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCC-CCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCC
Confidence 45678889999998885544445788888899999888888 45555567888888888888888887777888888888
Q ss_pred eEEccCccccccCCccccCCCCCccEEEcccccccccCCCCCCCccccCCCCccEEEecCCcccCccccccccCCcceeE
Q 048430 146 SIRLDNNSLSGSFPTDLCTRLPSLVQLRLLGNNITGRIPNREIPNEIGNLHNLKILDLGGNNIAGLIPSMIFNNSNMVAI 225 (973)
Q Consensus 146 ~L~L~~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L 225 (973)
+|+|++|.|+ .+|..+|..+++|++|+|++|.|++. .|..|+++++|++|+|++|.+++.. +..
T Consensus 127 ~L~L~~n~l~-~l~~~~~~~l~~L~~L~Ls~N~l~~~-----~~~~~~~l~~L~~L~L~~N~l~~~~---~~~------- 190 (597)
T 3oja_B 127 VLVLERNDLS-SLPRGIFHNTPKLTTLSMSNNNLERI-----EDDTFQATTSLQNLQLSSNRLTHVD---LSL------- 190 (597)
T ss_dssp EEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCBC-----CTTTTTTCTTCCEEECTTSCCSBCC---GGG-------
T ss_pred EEEeeCCCCC-CCCHHHhccCCCCCEEEeeCCcCCCC-----ChhhhhcCCcCcEEECcCCCCCCcC---hhh-------
Confidence 8888888888 77877777888888888888888743 3456778888888888888877542 222
Q ss_pred EeecccccccCCCCCCccccceeeeccccccccCcchhcccCcccEEEeccccccccCCCcccccccceEEEccCCcCCC
Q 048430 226 LLYGNHLSGHLPSSIYLPNLENLFLWKNNLSGIIPDSICNASEATILELSSNLFSGLVPNTFGNCRQLQILSLGDNQLTT 305 (973)
Q Consensus 226 ~l~~n~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~ 305 (973)
+++|++|++++|.+++. ....+|+.|++++|.+..+.+..+ ++|+.|+|++|.+++
T Consensus 191 ----------------l~~L~~L~l~~n~l~~l-----~~~~~L~~L~ls~n~l~~~~~~~~---~~L~~L~L~~n~l~~ 246 (597)
T 3oja_B 191 ----------------IPSLFHANVSYNLLSTL-----AIPIAVEELDASHNSINVVRGPVN---VELTILKLQHNNLTD 246 (597)
T ss_dssp ----------------CTTCSEEECCSSCCSEE-----ECCTTCSEEECCSSCCCEEECSCC---SCCCEEECCSSCCCC
T ss_pred ----------------hhhhhhhhcccCccccc-----cCCchhheeeccCCcccccccccC---CCCCEEECCCCCCCC
Confidence 45566666666665532 233456666666666654433222 456666666665543
Q ss_pred CCCCcchhhhhhhccCCcCcEEEccCCCCCCCCCCcccccccccceeecccCCccccCCCCCCCCCcccEEEeecCcccc
Q 048430 306 GSSAQGQIFYSSLAKCRYLRVLVLDTNPLKGVIPNSIGNLSTSLENFYAGSSQLSGGIPVGFGNLSNLLVLSLVNNELAG 385 (973)
Q Consensus 306 ~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~ 385 (973)
. .. +..+++|+.|+|++|.+++
T Consensus 247 ~---------~~-------------------------------------------------l~~l~~L~~L~Ls~N~l~~ 268 (597)
T 3oja_B 247 T---------AW-------------------------------------------------LLNYPGLVEVDLSYNELEK 268 (597)
T ss_dssp C---------GG-------------------------------------------------GGGCTTCSEEECCSSCCCE
T ss_pred C---------hh-------------------------------------------------hccCCCCCEEECCCCccCC
Confidence 1 12 3334445555555555554
Q ss_pred ccCcccCCCCCCCEEEccCCcCCCCCchhhhccCcCCeeecCCccccCcCcccccCcCCCCeeeccCCCCCCCCcccccc
Q 048430 386 AIPTVLGKLQKLQGLDLNSNKLKGFIPTDLCKLEKLNTLLSNNNALQGQIPTCLANLTSLRHLDFRSNSLNSTIPSTFWS 465 (973)
Q Consensus 386 ~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 465 (973)
..|..|..+++|+.|+|++|.+++ +|..+..+++|+.|+|++|.++ .+|..+..+++|+.|+|++|.+++.. +..
T Consensus 269 ~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~~---~~~ 343 (597)
T 3oja_B 269 IMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLK---LST 343 (597)
T ss_dssp EESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCC---CCT
T ss_pred CCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCcC---hhh
Confidence 555555555555555555555553 3444444555555555555555 34444555556666666666655431 445
Q ss_pred cccccEEEecCCccc
Q 048430 466 LKYILAVDFSLNSLS 480 (973)
Q Consensus 466 l~~L~~L~ls~N~l~ 480 (973)
+++|+.|++++|.++
T Consensus 344 ~~~L~~L~l~~N~~~ 358 (597)
T 3oja_B 344 HHTLKNLTLSHNDWD 358 (597)
T ss_dssp TCCCSEEECCSSCEE
T ss_pred cCCCCEEEeeCCCCC
Confidence 566666666666665
No 270
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=1.2e-35 Score=333.70 Aligned_cols=279 Identities=20% Similarity=0.216 Sum_probs=193.4
Q ss_pred HHHHHHhcCCCCCccccccCceEEEEEEe-CCCeEEEEEEEeccchhhHHHHHHHHHHHHhccCCceeEEEeeeecCCe-
Q 048430 673 HELQQATNGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQEDRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGF- 750 (973)
Q Consensus 673 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~- 750 (973)
.+.....++|...+.||+|+||.||+|+. .+++.||||++.... .....+.+|++.++.++||||+++++++...+.
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~ 94 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGER 94 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSS
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhccccc
Confidence 45667788999999999999999999996 468999999886543 223456778888899999999999999865332
Q ss_pred ------eEEEEEecCCCCHHHHhhh---CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCC-CCcEE
Q 048430 751 ------KALIMQYMPQGSLEKWLYS---HNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDD-DMVAH 820 (973)
Q Consensus 751 ------~~lv~e~~~~gsL~~~l~~---~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~-~~~~k 820 (973)
.++||||+++ ++.+.+.. ....+++..+..++.|++.|+.|||.. +.+|+||||||+||+++. ++.+|
T Consensus 95 ~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~-~~~ivH~Dlkp~NIll~~~~~~~k 172 (360)
T 3e3p_A 95 DRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLP-SVNVCHRDIKPHNVLVNEADGTLK 172 (360)
T ss_dssp CTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTST-TTCCBCSCCCGGGEEEETTTTEEE
T ss_pred cccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCC-CCCeecCcCCHHHEEEeCCCCcEE
Confidence 7899999986 55554432 334789999999999999999999932 588999999999999997 89999
Q ss_pred EeecccccccCCCCCcccccccccccccCccCCCCC-CCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhC
Q 048430 821 LGDFGIAKLLDGVDPVTQTMTLATIGYMAPEYGSEG-IVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESL 899 (973)
Q Consensus 821 l~Dfgla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 899 (973)
|+|||+++...... ......||+.|+|||.+.+. .++.++|||||||++|||++|+.||...... ..+...+....
T Consensus 173 l~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~-~~~~~~~~~~~ 249 (360)
T 3e3p_A 173 LCDFGSAKKLSPSE--PNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSA-GQLHEIVRVLG 249 (360)
T ss_dssp ECCCTTCBCCCTTS--CCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHC
T ss_pred EeeCCCceecCCCC--CcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChH-HHHHHHHHHcC
Confidence 99999998765322 23345689999999987654 4899999999999999999999999763221 12222222211
Q ss_pred --CcchhhhcccccCCC-----Cchh-hhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 900 --PGAVTEVVDANLLSR-----EDEE-DADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 900 --~~~~~~~~d~~l~~~-----~~~~-~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
+.......++..... .... ..........++.++.+++.+||+.||++|||+.|+++|
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 315 (360)
T 3e3p_A 250 CPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCH 315 (360)
T ss_dssp CCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred CCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 111111111111000 0000 000000111246789999999999999999999999986
No 271
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=3.2e-35 Score=332.40 Aligned_cols=201 Identities=22% Similarity=0.297 Sum_probs=172.0
Q ss_pred HHhcCCCCCccccccCceEEEEEEeC-CCeEEEEEEEeccchhhHHHHHHHHHHHHhcc-CC-----ceeEEEeeeecCC
Q 048430 677 QATNGFGESNLLGSGSFDNVYKATLA-NGVSVAVKVFNLQEDRALKSFDTECEVMRRIR-HR-----NLIKIVSSCSNPG 749 (973)
Q Consensus 677 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~-----niv~l~~~~~~~~ 749 (973)
...++|...+.||+|+||.||+|+.. +++.||||+++.. ......+..|+++++.++ |+ +|+++++++...+
T Consensus 51 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~ 129 (382)
T 2vx3_A 51 KWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRN 129 (382)
T ss_dssp EETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETT
T ss_pred EeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCC
Confidence 34578999999999999999999854 6899999999744 233567788999988885 44 4999999999999
Q ss_pred eeEEEEEecCCCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeC--CCCcEEEeeccc
Q 048430 750 FKALIMQYMPQGSLEKWLYSHN-YSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLD--DDMVAHLGDFGI 826 (973)
Q Consensus 750 ~~~lv~e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~--~~~~~kl~Dfgl 826 (973)
..++||||++ |+|.+++.... ..+++..+..++.|++.||.|||.. ..+||||||||+||+++ .++.+||+|||+
T Consensus 130 ~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~ 207 (382)
T 2vx3_A 130 HLCLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFGS 207 (382)
T ss_dssp EEEEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECCCTT
T ss_pred ceEEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEeccC
Confidence 9999999996 59999998764 4689999999999999999999931 46899999999999995 478899999999
Q ss_pred ccccCCCCCcccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCcc
Q 048430 827 AKLLDGVDPVTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEM 884 (973)
Q Consensus 827 a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~ 884 (973)
++..... .....+|+.|+|||.+.+..++.++|||||||++|||++|+.||...
T Consensus 208 a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~ 261 (382)
T 2vx3_A 208 SCQLGQR----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA 261 (382)
T ss_dssp CEETTCC----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ceecccc----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 9876432 23457899999999999889999999999999999999999999753
No 272
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=7.3e-36 Score=342.73 Aligned_cols=249 Identities=23% Similarity=0.291 Sum_probs=186.8
Q ss_pred CCCCccccccCceEEEEEEeCCCeEEEEEEEeccchhhHHHHHHHHHHHHhc-cCCceeEEEeeeecCCeeEEEEEecCC
Q 048430 682 FGESNLLGSGSFDNVYKATLANGVSVAVKVFNLQEDRALKSFDTECEVMRRI-RHRNLIKIVSSCSNPGFKALIMQYMPQ 760 (973)
Q Consensus 682 ~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 760 (973)
|...++||+|+||+||.+...+|+.||||++.... .+.+.+|+.+++++ +||||+++++++.+.+..++||||+.
T Consensus 17 ~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~- 92 (434)
T 2rio_A 17 VVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF---CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN- 92 (434)
T ss_dssp EEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGGG---HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-
T ss_pred eeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHHH---HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-
Confidence 44467899999999987777789999999986542 35678999999886 89999999999999999999999996
Q ss_pred CCHHHHhhhCCCC------CCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCC-------------CcEEE
Q 048430 761 GSLEKWLYSHNYS------LTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDD-------------MVAHL 821 (973)
Q Consensus 761 gsL~~~l~~~~~~------l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~-------------~~~kl 821 (973)
|+|.+++...... .++..+..++.||+.||+||| +.+|+||||||+||+++.+ +.+||
T Consensus 93 gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL 169 (434)
T 2rio_A 93 LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILI 169 (434)
T ss_dssp EEHHHHHHTC------------CCHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEE
T ss_pred CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEecCcccccccccCCCceEEEE
Confidence 6999999875411 123345789999999999999 7899999999999999754 48999
Q ss_pred eecccccccCCCCCc---ccccccccccccCccCCCC-------CCCCcchhHHHHHHHHHHHHh-CCCCCCccccCccc
Q 048430 822 GDFGIAKLLDGVDPV---TQTMTLATIGYMAPEYGSE-------GIVSISGDVYSFGILMMETFT-RRKPTNEMFTGEMS 890 (973)
Q Consensus 822 ~Dfgla~~~~~~~~~---~~~~~~~~~~y~aPE~~~~-------~~~~~~sDvws~Gvvl~ellt-g~~p~~~~~~~~~~ 890 (973)
+|||+++........ ......||+.|+|||.+.+ ..++.++|||||||++|||++ |+.||+.....+
T Consensus 170 ~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~-- 247 (434)
T 2rio_A 170 SDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE-- 247 (434)
T ss_dssp CCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH--
T ss_pred cccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhH--
Confidence 999999876543221 1234579999999998754 678999999999999999999 999986532221
Q ss_pred HHHHHHhhCCcchhhhcccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 891 LKQWVAESLPGAVTEVVDANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 891 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
........... .. .......++.++.+++.+||+.||++||++.|+++|
T Consensus 248 -~~i~~~~~~~~-------~~----------~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 296 (434)
T 2rio_A 248 -SNIIRGIFSLD-------EM----------KCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRH 296 (434)
T ss_dssp -HHHHHTCCCCC-------CC----------TTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred -HHHhcCCCCcc-------cc----------cccccccchHHHHHHHHHHhhCChhhCCCHHHHHhC
Confidence 11111110000 00 000123456789999999999999999999999975
No 273
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=4e-36 Score=332.57 Aligned_cols=254 Identities=23% Similarity=0.296 Sum_probs=179.1
Q ss_pred hcCCCCCccccccCceEEEEEEe-CCCeEEEEEEEeccc-hhhHHHHHHHHH-HHHhccCCceeEEEeeeecCCeeEEEE
Q 048430 679 TNGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQE-DRALKSFDTECE-VMRRIRHRNLIKIVSSCSNPGFKALIM 755 (973)
Q Consensus 679 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~-~l~~l~h~niv~l~~~~~~~~~~~lv~ 755 (973)
.++|...+.||+|+||.||+|.. .+++.||||+++... ......+..|+. +++.++||||+++++++..++..++||
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~ 100 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM 100 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence 36788889999999999999996 479999999997653 233445566665 677789999999999999999999999
Q ss_pred EecCCCCHHHHhhh----CCCCCCHHHHHHHHHHHHHHHHHhhhcCCC-CeEEccCCCCcEEeCCCCcEEEeeccccccc
Q 048430 756 QYMPQGSLEKWLYS----HNYSLTIRQRLDIMIDVASALEYLHHGYST-PIIHCDLKPNNVLLDDDMVAHLGDFGIAKLL 830 (973)
Q Consensus 756 e~~~~gsL~~~l~~----~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~-~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~ 830 (973)
||+++ +|.+++.. ....+++..+..++.|++.||.||| +. +|+||||||+||+++.++.+||+|||+++..
T Consensus 101 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~ 176 (327)
T 3aln_A 101 ELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLK---ENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQL 176 (327)
T ss_dssp CCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHH---HHHSCCCSCCCGGGEEEETTTEEEECCCSSSCC-
T ss_pred eecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHh---ccCCEeECCCCHHHEEEcCCCCEEEccCCCceec
Confidence 99975 88887763 2347899999999999999999999 66 9999999999999999999999999999865
Q ss_pred CCCCCcccccccccccccCccCC----CCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhh
Q 048430 831 DGVDPVTQTMTLATIGYMAPEYG----SEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEV 906 (973)
Q Consensus 831 ~~~~~~~~~~~~~~~~y~aPE~~----~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 906 (973)
... .......|++.|+|||.+ ....++.++|||||||++|||++|+.||....... ..+.....+..
T Consensus 177 ~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~----~~~~~~~~~~~--- 247 (327)
T 3aln_A 177 VDS--IAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVF----DQLTQVVKGDP--- 247 (327)
T ss_dssp -------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-----------CCCCCSCC---
T ss_pred ccc--cccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHH----HHHHHHhcCCC---
Confidence 432 222334689999999987 45678999999999999999999999986532110 00000000000
Q ss_pred cccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 907 VDANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 907 ~d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
+.+... ....++.++.+++.+||+.||++||++.|++++
T Consensus 248 --~~~~~~----------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 286 (327)
T 3aln_A 248 --PQLSNS----------EEREFSPSFINFVNLCLTKDESKRPKYKELLKH 286 (327)
T ss_dssp --CCCCCC----------SSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred --CCCCCc----------ccccCCHHHHHHHHHHhhCChhhCcCHHHHHhC
Confidence 000000 001245678999999999999999999999986
No 274
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=2.3e-36 Score=333.13 Aligned_cols=243 Identities=21% Similarity=0.280 Sum_probs=200.1
Q ss_pred HHhcCCCCCccccccCceEEEEEEe-CCCeEEEEEEEeccchh------hHHHHHHHHHHHHhcc--CCceeEEEeeeec
Q 048430 677 QATNGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQEDR------ALKSFDTECEVMRRIR--HRNLIKIVSSCSN 747 (973)
Q Consensus 677 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~--h~niv~l~~~~~~ 747 (973)
...++|...+.||+|+||.||+|+. .+++.||||++...... ..+.+.+|+.++++++ |+||+++++++..
T Consensus 40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~ 119 (320)
T 3a99_A 40 PLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFER 119 (320)
T ss_dssp CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEEC
T ss_pred CccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEec
Confidence 3456788999999999999999985 57899999998755321 2245678999999996 5999999999999
Q ss_pred CCeeEEEEEecCC-CCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeC-CCCcEEEeecc
Q 048430 748 PGFKALIMQYMPQ-GSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLD-DDMVAHLGDFG 825 (973)
Q Consensus 748 ~~~~~lv~e~~~~-gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~-~~~~~kl~Dfg 825 (973)
++..++|+|++.+ ++|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++ .++.+||+|||
T Consensus 120 ~~~~~lv~e~~~~~~~L~~~l~~~~-~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~kL~Dfg 195 (320)
T 3a99_A 120 PDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFG 195 (320)
T ss_dssp SSEEEEEEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEECCCT
T ss_pred CCcEEEEEEcCCCCccHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCcEeCCCCHHHEEEeCCCCCEEEeeCc
Confidence 9999999999976 89999998754 6899999999999999999999 79999999999999999 78999999999
Q ss_pred cccccCCCCCcccccccccccccCccCCCCCCC-CcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchh
Q 048430 826 IAKLLDGVDPVTQTMTLATIGYMAPEYGSEGIV-SISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVT 904 (973)
Q Consensus 826 la~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 904 (973)
+++..... ......||+.|+|||.+....+ +.++|||||||++|||++|+.||.... .....
T Consensus 196 ~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~-------~~~~~------- 258 (320)
T 3a99_A 196 SGALLKDT---VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE-------EIIRG------- 258 (320)
T ss_dssp TCEECCSS---CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH-------HHHHC-------
T ss_pred cccccccc---cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh-------hhhcc-------
Confidence 99876432 2234568999999998776665 788999999999999999999986421 11110
Q ss_pred hhcccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 905 EVVDANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 905 ~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
.... +..+++++.+++.+||+.||++||+++|++++
T Consensus 259 -----~~~~------------~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 294 (320)
T 3a99_A 259 -----QVFF------------RQRVSSECQHLIRWCLALRPSDRPTFEEIQNH 294 (320)
T ss_dssp -----CCCC------------SSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred -----cccc------------cccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0000 01234568899999999999999999999986
No 275
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=1.1e-35 Score=327.69 Aligned_cols=252 Identities=23% Similarity=0.261 Sum_probs=182.2
Q ss_pred hcCCCCCccccccCceEEEEEEeC-CCeEEEEEEEeccch--hhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEEE
Q 048430 679 TNGFGESNLLGSGSFDNVYKATLA-NGVSVAVKVFNLQED--RALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALIM 755 (973)
Q Consensus 679 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 755 (973)
.++|...+.||+|+||.||+|+.. +++.||||++..... ...+.+.++..+++.++||||+++++++.+.+..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~ 103 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM 103 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence 456888899999999999999964 789999999976532 22334455556788889999999999999999999999
Q ss_pred EecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCC-CeEEccCCCCcEEeCCCCcEEEeecccccccCCCC
Q 048430 756 QYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYST-PIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGVD 834 (973)
Q Consensus 756 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~-~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 834 (973)
||+ ++.+..+.......+++..+..++.|++.||.||| +. +|+||||||+||+++.++.+||+|||++......
T Consensus 104 e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~- 178 (318)
T 2dyl_A 104 ELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLK---EKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDD- 178 (318)
T ss_dssp CCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HHHCCCCCCCCGGGEEECTTSCEEECCCTTC-------
T ss_pred ecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---hhCCEEeCCCCHHHEEECCCCCEEEEECCCchhccCC-
Confidence 999 55666666554557999999999999999999999 64 9999999999999999999999999999765432
Q ss_pred CcccccccccccccCccCCC-----CCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhccc
Q 048430 835 PVTQTMTLATIGYMAPEYGS-----EGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDA 909 (973)
Q Consensus 835 ~~~~~~~~~~~~y~aPE~~~-----~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 909 (973)
.......+++.|+|||.+. ...++.++|||||||++|||++|+.||..................+
T Consensus 179 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~--------- 248 (318)
T 2dyl_A 179 -KAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPP--------- 248 (318)
T ss_dssp ---------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSCCC---------
T ss_pred -ccccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccCCC---------
Confidence 2223456899999999874 5568899999999999999999999986532211111111111000
Q ss_pred ccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 910 NLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 910 ~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
... ....++.++.+++.+||+.||++||+++|+++|
T Consensus 249 ~~~------------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (318)
T 2dyl_A 249 LLP------------GHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEH 284 (318)
T ss_dssp CCC------------SSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred CCC------------ccCCCCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 000 001235568899999999999999999999986
No 276
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=1.2e-34 Score=329.02 Aligned_cols=334 Identities=20% Similarity=0.206 Sum_probs=198.5
Q ss_pred CCCccEEEecCCcccCccccccccCCcceeEEeecccccccCCCC-CCccccceeeeccccccccCcchhcccCcccEEE
Q 048430 195 LHNLKILDLGGNNIAGLIPSMIFNNSNMVAILLYGNHLSGHLPSS-IYLPNLENLFLWKNNLSGIIPDSICNASEATILE 273 (973)
Q Consensus 195 l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~-~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~ 273 (973)
++++++|++++|.++...+..+..+++|+.|++++|.+++..+.. ..+++|++|+|++|++++..|+.|+.+++|++|+
T Consensus 44 l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 123 (390)
T 3o6n_A 44 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 123 (390)
T ss_dssp GCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred cCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEE
Confidence 345555555555555433333344222222222222222222211 1245555555555555555555555555555555
Q ss_pred eccccccccCCCcccccccceEEEccCCcCCCCCCCcchhhhhhhccCCcCcEEEccCCCCCCCCCCcccccccccceee
Q 048430 274 LSSNLFSGLVPNTFGNCRQLQILSLGDNQLTTGSSAQGQIFYSSLAKCRYLRVLVLDTNPLKGVIPNSIGNLSTSLENFY 353 (973)
Q Consensus 274 L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~l~~l~ 353 (973)
|++|.++.+++..|+++++|++|++++|+++.. .
T Consensus 124 L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~-------------------------------~--------------- 157 (390)
T 3o6n_A 124 LERNDLSSLPRGIFHNTPKLTTLSMSNNNLERI-------------------------------E--------------- 157 (390)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBC-------------------------------C---------------
T ss_pred CCCCccCcCCHHHhcCCCCCcEEECCCCccCcc-------------------------------C---------------
Confidence 555555555444455555555555555555432 1
Q ss_pred cccCCccccCCCCCCCCCcccEEEeecCccccccCcccCCCCCCCEEEccCCcCCCCCchhhhccCcCCeeecCCccccC
Q 048430 354 AGSSQLSGGIPVGFGNLSNLLVLSLVNNELAGAIPTVLGKLQKLQGLDLNSNKLKGFIPTDLCKLEKLNTLLSNNNALQG 433 (973)
Q Consensus 354 l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 433 (973)
|..|..+++|++|++++|++++. .+..+++|+.|++++|.+++. ...++|+.|++++|.+..
T Consensus 158 ----------~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~l~~~-----~~~~~L~~L~l~~n~l~~ 219 (390)
T 3o6n_A 158 ----------DDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLSTL-----AIPIAVEELDASHNSINV 219 (390)
T ss_dssp ----------TTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCSSCCSEE-----ECCSSCSEEECCSSCCCE
T ss_pred ----------hhhccCCCCCCEEECCCCcCCcc---ccccccccceeeccccccccc-----CCCCcceEEECCCCeeee
Confidence 22244455566666666655533 234455566666666665531 223456666666666654
Q ss_pred cCcccccCcCCCCeeeccCCCCCCCCcccccccccccEEEecCCcccCCcCcCccCCCCCCeEEccCCcCcccCCccccc
Q 048430 434 QIPTCLANLTSLRHLDFRSNSLNSTIPSTFWSLKYILAVDFSLNSLSGSLPLNIGNLEALGGLNLTGNQLSGYIPSSIGN 513 (973)
Q Consensus 434 ~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 513 (973)
. |.. ..++|+.|++++|.+++. ..+..+++|+.|++++|.+++..|..+..+++|+.|+|++|+++ .+|..+..
T Consensus 220 ~-~~~--~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~ 293 (390)
T 3o6n_A 220 V-RGP--VNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLV-ALNLYGQP 293 (390)
T ss_dssp E-ECC--CCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCC-EEECSSSC
T ss_pred c-ccc--ccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCc-ccCcccCC
Confidence 3 221 235677777777777653 46777777888888888877777777888888888888888887 45666677
Q ss_pred CCcCCEEEcccCccccCCCCCcccccccccccccccccCCCCCccccccccccccccCCCcccccCCCCCCCCccCcccc
Q 048430 514 LKNLDWLALARNAFQGPIPQSFGSLISLQSLDLSGNNISGEIPKSLEKLSRLVDFNVSFNGLEGEIPSGGPFVNFTADSF 593 (973)
Q Consensus 514 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~ 593 (973)
+++|+.|+|++|+++ .+|..+..+++|++|+|++|+|+.. | +..+++|+.|++++|++++.... ..+..+....+
T Consensus 294 l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~~-~--~~~~~~L~~L~l~~N~~~~~~~~-~~~~~~~~~~~ 368 (390)
T 3o6n_A 294 IPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL-K--LSTHHTLKNLTLSHNDWDCNSLR-ALFRNVARPAV 368 (390)
T ss_dssp CTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC-C--CCTTCCCSEEECCSSCEEHHHHH-HHTTTCCTTTB
T ss_pred CCCCCEEECCCCcce-ecCccccccCcCCEEECCCCcccee-C--chhhccCCEEEcCCCCccchhHH-HHHHHHHhhcc
Confidence 888888888888887 5666778888888888888888754 3 66778888888888888774322 12233444455
Q ss_pred ccCcccccCC
Q 048430 594 KQNYALCGSS 603 (973)
Q Consensus 594 ~~n~~~c~~~ 603 (973)
.++...|+++
T Consensus 369 ~~~~~~c~~~ 378 (390)
T 3o6n_A 369 DDADQHCKID 378 (390)
T ss_dssp CCCCSCCCTT
T ss_pred cccCceeccc
Confidence 6676777654
No 277
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.4e-36 Score=330.87 Aligned_cols=246 Identities=22% Similarity=0.311 Sum_probs=191.9
Q ss_pred HHHHHhcCCCCCccccccCceEEEEEEe-CCCeEEEEEEEeccch------hhHHHHHHHHHHHHhc----cCCceeEEE
Q 048430 674 ELQQATNGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQED------RALKSFDTECEVMRRI----RHRNLIKIV 742 (973)
Q Consensus 674 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~------~~~~~~~~e~~~l~~l----~h~niv~l~ 742 (973)
+.+...++|...+.||+|+||.||+|+. .+++.||||+++.... .....+.+|+.++.++ +||||++++
T Consensus 25 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~ 104 (312)
T 2iwi_A 25 DREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLL 104 (312)
T ss_dssp --------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEE
T ss_pred chhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEE
Confidence 3344567899999999999999999985 5789999999865432 1223456799999998 899999999
Q ss_pred eeeecCCeeEEEEEe-cCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeC-CCCcEE
Q 048430 743 SSCSNPGFKALIMQY-MPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLD-DDMVAH 820 (973)
Q Consensus 743 ~~~~~~~~~~lv~e~-~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~-~~~~~k 820 (973)
+++...+..++|+|+ +.+++|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++ .++.+|
T Consensus 105 ~~~~~~~~~~~v~e~~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~k 180 (312)
T 2iwi_A 105 DWFETQEGFMLVLERPLPAQDLFDYITEKG-PLGEGPSRCFFGQVVAAIQHCH---SRGVVHRDIKDENILIDLRRGCAK 180 (312)
T ss_dssp EEC-----CEEEEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HHTEECCCCSGGGEEEETTTTEEE
T ss_pred EEEecCCeEEEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChhhEEEeCCCCeEE
Confidence 999999999999999 78999999998755 6999999999999999999999 78999999999999999 889999
Q ss_pred EeecccccccCCCCCcccccccccccccCccCCCCCCC-CcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhC
Q 048430 821 LGDFGIAKLLDGVDPVTQTMTLATIGYMAPEYGSEGIV-SISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESL 899 (973)
Q Consensus 821 l~Dfgla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 899 (973)
|+|||++...... ......|+..|+|||......+ +.++|||||||++|||++|+.||.... ....
T Consensus 181 l~dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-------~~~~--- 247 (312)
T 2iwi_A 181 LIDFGSGALLHDE---PYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ-------EILE--- 247 (312)
T ss_dssp ECCCSSCEECCSS---CBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH-------HHHH---
T ss_pred EEEcchhhhcccC---cccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH-------HHhh---
Confidence 9999999876432 2234568999999998776655 458999999999999999999986421 1111
Q ss_pred CcchhhhcccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 900 PGAVTEVVDANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 900 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
.... .+..++.++.+++.+||+.||++||+++|+++|
T Consensus 248 ---------~~~~------------~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 284 (312)
T 2iwi_A 248 ---------AELH------------FPAHVSPDCCALIRRCLAPKPSSRPSLEEILLD 284 (312)
T ss_dssp ---------TCCC------------CCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred ---------hccC------------CcccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0000 011234568899999999999999999999985
No 278
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=1.2e-35 Score=329.39 Aligned_cols=254 Identities=22% Similarity=0.237 Sum_probs=174.0
Q ss_pred HhcCCCCCc-cccccCceEEEEEEeC-CCeEEEEEEEeccchhhHHHHHHHHHHHHhccCCceeEEEeeeec----CCee
Q 048430 678 ATNGFGESN-LLGSGSFDNVYKATLA-NGVSVAVKVFNLQEDRALKSFDTECEVMRRIRHRNLIKIVSSCSN----PGFK 751 (973)
Q Consensus 678 ~~~~~~~~~-~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~ 751 (973)
..++|...+ +||+|+||.||+|... +++.||||++..... ...+....++.++||||+++++++.. ....
T Consensus 26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 101 (336)
T 3fhr_A 26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPK----ARQEVDHHWQASGGPHIVCILDVYENMHHGKRCL 101 (336)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSHH----HHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcHH----HHHHHHHHHHhcCCCChHHHHHHHhhccCCCceE
Confidence 346777754 6999999999999965 799999999864321 12223334566799999999999865 4558
Q ss_pred EEEEEecCCCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCC---CCcEEEeecccc
Q 048430 752 ALIMQYMPQGSLEKWLYSHN-YSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDD---DMVAHLGDFGIA 827 (973)
Q Consensus 752 ~lv~e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~---~~~~kl~Dfgla 827 (973)
++||||+++|+|.+++.... ..+++.++..++.|++.||+||| +.+|+||||||+||+++. ++.+||+|||++
T Consensus 102 ~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH---~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~ 178 (336)
T 3fhr_A 102 LIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLH---SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFA 178 (336)
T ss_dssp EEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred EEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEEecCCCceEEEeccccc
Confidence 99999999999999998754 46999999999999999999999 789999999999999976 455999999999
Q ss_pred cccCCCCCcccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhc
Q 048430 828 KLLDGVDPVTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVV 907 (973)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (973)
+..... ......+|+.|+|||.+....++.++|||||||++|||++|+.||.......... .... .+.
T Consensus 179 ~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~-~~~~--------~~~ 246 (336)
T 3fhr_A 179 KETTQN---ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISP-GMKR--------RIR 246 (336)
T ss_dssp EEC-------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC--------------------------
T ss_pred eecccc---ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhh-hHHH--------hhh
Confidence 865422 2234568999999999988889999999999999999999999986533221100 0000 000
Q ss_pred ccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 048430 908 DANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADL 958 (973)
Q Consensus 908 d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L 958 (973)
.... ... ......++.++.+++.+||+.||++|||++|+++|-
T Consensus 247 ~~~~-~~~-------~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp 289 (336)
T 3fhr_A 247 LGQY-GFP-------NPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHP 289 (336)
T ss_dssp -----CCC-------TTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSH
T ss_pred cccc-ccC-------chhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcCc
Confidence 0000 000 000123456789999999999999999999999863
No 279
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=9.2e-36 Score=336.35 Aligned_cols=269 Identities=18% Similarity=0.229 Sum_probs=200.6
Q ss_pred cCCCCCccccccCceEEEEEEe-CCCeEEEEEEEeccchhhHHHHHHHHHHHHhcc-----------CCceeEEEeeeec
Q 048430 680 NGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQEDRALKSFDTECEVMRRIR-----------HRNLIKIVSSCSN 747 (973)
Q Consensus 680 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-----------h~niv~l~~~~~~ 747 (973)
++|...+.||+|+||.||+|+. .+++.||||++.... ...+.+.+|+.++++++ ||||+++++++..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~ 97 (373)
T 1q8y_A 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNH 97 (373)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEE
T ss_pred CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc-cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhc
Confidence 5788899999999999999995 579999999987432 33467889999999886 8999999999875
Q ss_pred CC----eeEEEEEecCCCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHhhhcCCC-CeEEccCCCCcEEeC------C
Q 048430 748 PG----FKALIMQYMPQGSLEKWLYSHN-YSLTIRQRLDIMIDVASALEYLHHGYST-PIIHCDLKPNNVLLD------D 815 (973)
Q Consensus 748 ~~----~~~lv~e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~-~ivH~dlk~~Nill~------~ 815 (973)
.+ ..++||||+ +++|.+++.... ..+++..+..++.||+.||+||| ++ +|+||||||+||+++ .
T Consensus 98 ~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH---~~~~ivH~Dikp~NIll~~~~~~~~ 173 (373)
T 1q8y_A 98 KGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMH---RRCGIIHTDIKPENVLMEIVDSPEN 173 (373)
T ss_dssp EETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCEECSCCSGGGEEEEEEETTTT
T ss_pred cCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHH---hcCCEEecCCChHHeEEeccCCCcC
Confidence 43 789999999 889999998743 45999999999999999999999 66 999999999999994 4
Q ss_pred CCcEEEeecccccccCCCCCcccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCc-----cc
Q 048430 816 DMVAHLGDFGIAKLLDGVDPVTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGE-----MS 890 (973)
Q Consensus 816 ~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~-----~~ 890 (973)
.+.+||+|||++...... .....+|+.|+|||.+.+..++.++|||||||++|||++|+.||....... ..
T Consensus 174 ~~~~kl~Dfg~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~ 249 (373)
T 1q8y_A 174 LIQIKIADLGNACWYDEH----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDH 249 (373)
T ss_dssp EEEEEECCCTTCEETTBC----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHH
T ss_pred cceEEEcccccccccCCC----CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHH
Confidence 458999999999876432 233468999999999988889999999999999999999999997543211 11
Q ss_pred HHHHHHhhC--Ccchh-------hhcccc--cC---CCCc----hhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHH
Q 048430 891 LKQWVAESL--PGAVT-------EVVDAN--LL---SRED----EEDADDFATKKTCISYIMSLALKCSAEIPEERINVK 952 (973)
Q Consensus 891 ~~~~~~~~~--~~~~~-------~~~d~~--l~---~~~~----~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ 952 (973)
+.+.+.... +..+. ..++.. +. .... .........+..++.++.+++.+||+.||++|||++
T Consensus 250 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ 329 (373)
T 1q8y_A 250 IAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAG 329 (373)
T ss_dssp HHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHH
T ss_pred HHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHH
Confidence 112111111 00000 000000 00 0000 000111123356788899999999999999999999
Q ss_pred HHHHH
Q 048430 953 DALAD 957 (973)
Q Consensus 953 evl~~ 957 (973)
|+++|
T Consensus 330 ell~h 334 (373)
T 1q8y_A 330 GLVNH 334 (373)
T ss_dssp HHHTC
T ss_pred HHhhC
Confidence 99986
No 280
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=3.9e-35 Score=328.84 Aligned_cols=269 Identities=20% Similarity=0.273 Sum_probs=201.3
Q ss_pred hcCCCCCccccccCceEEEEEEeC-CC-eEEEEEEEeccchhhHHHHHHHHHHHHhccCCc------eeEEEeeeecCCe
Q 048430 679 TNGFGESNLLGSGSFDNVYKATLA-NG-VSVAVKVFNLQEDRALKSFDTECEVMRRIRHRN------LIKIVSSCSNPGF 750 (973)
Q Consensus 679 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~-~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n------iv~l~~~~~~~~~ 750 (973)
.++|...+.||+|+||.||+|... ++ +.||||+++.. ....+.+.+|+.++++++|++ ++.+++++...+.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 96 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGH 96 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTE
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCe
Confidence 467889999999999999999864 34 78999998643 334567889999999998766 9999999999999
Q ss_pred eEEEEEecCCCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEe----------------
Q 048430 751 KALIMQYMPQGSLEKWLYSHN-YSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLL---------------- 813 (973)
Q Consensus 751 ~~lv~e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill---------------- 813 (973)
.++||||+ ++++.+++.... ..+++.++..++.||+.||+||| +.+|+||||||+||++
T Consensus 97 ~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~ 172 (355)
T 2eu9_A 97 MCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLH---ENQLTHTDLKPENILFVNSEFETLYNEHKSCE 172 (355)
T ss_dssp EEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEESCCCEEEEECCC-CCC
T ss_pred EEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEeccccccccccccccc
Confidence 99999999 567777776654 56999999999999999999999 8999999999999999
Q ss_pred ---CCCCcEEEeecccccccCCCCCcccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCccc
Q 048430 814 ---DDDMVAHLGDFGIAKLLDGVDPVTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMS 890 (973)
Q Consensus 814 ---~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~ 890 (973)
+.++.+||+|||+++..... .....||+.|+|||.+.+..++.++|||||||++|||++|+.||......+ .
T Consensus 173 ~~~~~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-~ 247 (355)
T 2eu9_A 173 EKSVKNTSIRVADFGSATFDHEH----HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENRE-H 247 (355)
T ss_dssp EEEESCCCEEECCCTTCEETTSC----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-H
T ss_pred ccccCCCcEEEeecCcccccccc----ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHH-H
Confidence 56789999999999864322 234568999999999988899999999999999999999999997532211 1
Q ss_pred HHHHHHhh--CCcchhhhc-------ccccCCCCchhhhh-----------hHHhHHHHHHHHHHHHHhccccCCCCCCC
Q 048430 891 LKQWVAES--LPGAVTEVV-------DANLLSREDEEDAD-----------DFATKKTCISYIMSLALKCSAEIPEERIN 950 (973)
Q Consensus 891 ~~~~~~~~--~~~~~~~~~-------d~~l~~~~~~~~~~-----------~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt 950 (973)
+....... .+..+.... .....-........ ........+.++.+++.+||+.||++|||
T Consensus 248 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt 327 (355)
T 2eu9_A 248 LVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRIT 327 (355)
T ss_dssp HHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCC
T ss_pred HHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcC
Confidence 11111111 111110000 00000000000000 00011234567999999999999999999
Q ss_pred HHHHHHH
Q 048430 951 VKDALAD 957 (973)
Q Consensus 951 ~~evl~~ 957 (973)
++|+++|
T Consensus 328 ~~e~l~h 334 (355)
T 2eu9_A 328 LAEALLH 334 (355)
T ss_dssp HHHHTTS
T ss_pred HHHHhcC
Confidence 9999976
No 281
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=7.2e-36 Score=341.53 Aligned_cols=249 Identities=22% Similarity=0.288 Sum_probs=188.6
Q ss_pred cCCCCCccccccCceEEEEEEeCCCeEEEEEEEeccchhhHHHHHHHHHHHHhc-cCCceeEEEeeeecCCeeEEEEEec
Q 048430 680 NGFGESNLLGSGSFDNVYKATLANGVSVAVKVFNLQEDRALKSFDTECEVMRRI-RHRNLIKIVSSCSNPGFKALIMQYM 758 (973)
Q Consensus 680 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~ 758 (973)
.+|...++||+|+||+||.....+++.||||++..... ..+.+|+.+++++ +||||+++++++.+....++||||+
T Consensus 24 ~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~---~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~ 100 (432)
T 3p23_A 24 ISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF---SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELC 100 (432)
T ss_dssp EEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE---EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred EEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH---HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECC
Confidence 45777899999999997766667799999999864322 2356899999999 7999999999999999999999999
Q ss_pred CCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCC-----CCcEEEeecccccccCCC
Q 048430 759 PQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDD-----DMVAHLGDFGIAKLLDGV 833 (973)
Q Consensus 759 ~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~-----~~~~kl~Dfgla~~~~~~ 833 (973)
. |+|.+++........+.++..++.||+.||+||| +.+|+||||||+||+++. ...+||+|||+++.....
T Consensus 101 ~-g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~ 176 (432)
T 3p23_A 101 A-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVG 176 (432)
T ss_dssp S-EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHH---HTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC---
T ss_pred C-CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHH---HCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCC
Confidence 6 5999999877655666677899999999999999 789999999999999953 336889999999876432
Q ss_pred CC--cccccccccccccCccCCC---CCCCCcchhHHHHHHHHHHHHh-CCCCCCccccCcccHHHHHHhhCCcchhhhc
Q 048430 834 DP--VTQTMTLATIGYMAPEYGS---EGIVSISGDVYSFGILMMETFT-RRKPTNEMFTGEMSLKQWVAESLPGAVTEVV 907 (973)
Q Consensus 834 ~~--~~~~~~~~~~~y~aPE~~~---~~~~~~~sDvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (973)
.. .......||+.|+|||.+. ...++.++|||||||++|||++ |+.||...... .... ......
T Consensus 177 ~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~---~~~~---~~~~~~---- 246 (432)
T 3p23_A 177 RHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQR---QANI---LLGACS---- 246 (432)
T ss_dssp ---------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTH---HHHH---HTTCCC----
T ss_pred CcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHH---HHHH---HhccCC----
Confidence 21 2233457999999999887 4567889999999999999999 89998542211 1110 000000
Q ss_pred ccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 908 DANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 908 d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
.... .........+.+++.+||+.||++||+++|+++|
T Consensus 247 ----~~~~--------~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~h 284 (432)
T 3p23_A 247 ----LDCL--------HPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKH 284 (432)
T ss_dssp ----CTTS--------CTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ----cccc--------CccccccHHHHHHHHHHHhCCHhhCCCHHHHHhC
Confidence 0000 0011235567899999999999999999999965
No 282
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=1.3e-35 Score=332.23 Aligned_cols=264 Identities=22% Similarity=0.252 Sum_probs=196.9
Q ss_pred hcCCCCCccccccCceEEEEEEe-CCCeEEEEEEEeccc--hhhHHHHHHHHHHHHhccCCceeEEEeeeecCCe-----
Q 048430 679 TNGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQE--DRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGF----- 750 (973)
Q Consensus 679 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~----- 750 (973)
.++|...+.||+|+||.||+|.. .+|+.||||++.... ....+.+.+|+.++++++||||+++++++...+.
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 102 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 102 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence 35788889999999999999986 479999999986542 3345778999999999999999999999976653
Q ss_pred -eEEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccc
Q 048430 751 -KALIMQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKL 829 (973)
Q Consensus 751 -~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~ 829 (973)
.++||||++ ++|.+++.. .+++.++..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 103 ~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~i~~qi~~al~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~ 175 (353)
T 3coi_A 103 DFYLVMPFMQ-TDLQKIMGL---KFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLARH 175 (353)
T ss_dssp CCEEEEECCS-EEGGGTTTS---CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECTTCCEEECSTTCTTC
T ss_pred eEEEEecccc-CCHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEeECCCCcEEEeecccccC
Confidence 499999997 588887753 5899999999999999999999 78999999999999999999999999999986
Q ss_pred cCCCCCcccccccccccccCccCCCC-CCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhC-C-cchhhh
Q 048430 830 LDGVDPVTQTMTLATIGYMAPEYGSE-GIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESL-P-GAVTEV 906 (973)
Q Consensus 830 ~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~-~-~~~~~~ 906 (973)
.... .....+|+.|+|||.+.+ ..++.++|||||||++|||++|+.||...... ..+........ + ......
T Consensus 176 ~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~ 250 (353)
T 3coi_A 176 ADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYL-DQLTQILKVTGVPGTEFVQK 250 (353)
T ss_dssp ------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHH-HHHHHHHHHHCBCCHHHHTT
T ss_pred CCCC----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCCHHHHHH
Confidence 5321 234568999999998766 67899999999999999999999998653211 11111111110 0 000000
Q ss_pred ccc--------ccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 907 VDA--------NLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 907 ~d~--------~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
+.. .+...... ........++.++.+++.+|++.||++|||++|+++|
T Consensus 251 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 306 (353)
T 3coi_A 251 LNDKAAKSYIQSLPQTPRK---DFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 306 (353)
T ss_dssp CSCHHHHHHHHTSCBCSSC---CTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HhhHHHHHHHHhCcCCCCc---cHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 000 00000000 0000112346779999999999999999999999976
No 283
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=1.5e-34 Score=346.29 Aligned_cols=334 Identities=19% Similarity=0.217 Sum_probs=205.6
Q ss_pred CCCccEEEcccccccccCCCCCCCc-cccCCCCccEEEecCCcccCccccccccCCcceeEEeecccccccCCCCCCccc
Q 048430 166 LPSLVQLRLLGNNITGRIPNREIPN-EIGNLHNLKILDLGGNNIAGLIPSMIFNNSNMVAILLYGNHLSGHLPSSIYLPN 244 (973)
Q Consensus 166 l~~L~~L~L~~N~l~~~~~~~~~p~-~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~l~~ 244 (973)
+++++.|++++|.++. +|. .++++++|++|+|++|.|++..|..|.. +++
T Consensus 50 l~~l~~l~l~~~~l~~------lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~-----------------------l~~ 100 (597)
T 3oja_B 50 LNNQKIVTFKNSTMRK------LPAALLDSFRQVELLNLNDLQIEEIDTYAFAY-----------------------AHT 100 (597)
T ss_dssp GCCCSEEEESSCEESE------ECTHHHHHCCCCSEEECTTSCCCEECTTTTTT-----------------------CTT
T ss_pred CCCceEEEeeCCCCCC------cCHHHHccCCCCcEEECCCCCCCCCChHHhcC-----------------------CCC
Confidence 5667777777777752 333 3566777777777777777665555555 455
Q ss_pred cceeeeccccccccCcchhcccCcccEEEeccccccccCCCcccccccceEEEccCCcCCCCCCCcchhhhhhhccCCcC
Q 048430 245 LENLFLWKNNLSGIIPDSICNASEATILELSSNLFSGLVPNTFGNCRQLQILSLGDNQLTTGSSAQGQIFYSSLAKCRYL 324 (973)
Q Consensus 245 L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~L 324 (973)
|++|+|++|.+++..|..|+.+++|++|+|++|.++++++..|+++++|++|+|++|.++..+
T Consensus 101 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~----------------- 163 (597)
T 3oja_B 101 IQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIE----------------- 163 (597)
T ss_dssp CCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCC-----------------
T ss_pred CCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCC-----------------
Confidence 555555555555555555555555555555555555555555555555555555555554321
Q ss_pred cEEEccCCCCCCCCCCcccccccccceeecccCCccccCCCCCCCCCcccEEEeecCccccccCcccCCCCCCCEEEccC
Q 048430 325 RVLVLDTNPLKGVIPNSIGNLSTSLENFYAGSSQLSGGIPVGFGNLSNLLVLSLVNNELAGAIPTVLGKLQKLQGLDLNS 404 (973)
Q Consensus 325 ~~L~L~~N~l~~~~p~~~~~l~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~ 404 (973)
|..|..+++|++|++++|.+++.. +..+++|+.|++++
T Consensus 164 ---------------------------------------~~~~~~l~~L~~L~L~~N~l~~~~---~~~l~~L~~L~l~~ 201 (597)
T 3oja_B 164 ---------------------------------------DDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSY 201 (597)
T ss_dssp ---------------------------------------TTTTTTCTTCCEEECTTSCCSBCC---GGGCTTCSEEECCS
T ss_pred ---------------------------------------hhhhhcCCcCcEEECcCCCCCCcC---hhhhhhhhhhhccc
Confidence 112333333444444444433221 22233444444444
Q ss_pred CcCCCCCchhhhccCcCCeeecCCccccCcCcccccCcCCCCeeeccCCCCCCCCcccccccccccEEEecCCcccCCcC
Q 048430 405 NKLKGFIPTDLCKLEKLNTLLSNNNALQGQIPTCLANLTSLRHLDFRSNSLNSTIPSTFWSLKYILAVDFSLNSLSGSLP 484 (973)
Q Consensus 405 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p 484 (973)
|.+++. ...++|+.|++++|.+....+.. .++|+.|+|++|.+++ +..+..+++|+.|++++|.+++..|
T Consensus 202 n~l~~l-----~~~~~L~~L~ls~n~l~~~~~~~---~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~ 271 (597)
T 3oja_B 202 NLLSTL-----AIPIAVEELDASHNSINVVRGPV---NVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMY 271 (597)
T ss_dssp SCCSEE-----ECCTTCSEEECCSSCCCEEECSC---CSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEES
T ss_pred Cccccc-----cCCchhheeeccCCccccccccc---CCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCH
Confidence 444321 12234455555555544322211 2467777777777765 3567777777777777777777777
Q ss_pred cCccCCCCCCeEEccCCcCcccCCcccccCCcCCEEEcccCccccCCCCCcccccccccccccccccCCCCCcccccccc
Q 048430 485 LNIGNLEALGGLNLTGNQLSGYIPSSIGNLKNLDWLALARNAFQGPIPQSFGSLISLQSLDLSGNNISGEIPKSLEKLSR 564 (973)
Q Consensus 485 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 564 (973)
..|+.+++|+.|+|++|++++ +|..+..+++|+.|+|++|.++ .+|..+..+++|++|+|++|+|++. | +..+++
T Consensus 272 ~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~-~--~~~~~~ 346 (597)
T 3oja_B 272 HPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL-K--LSTHHT 346 (597)
T ss_dssp GGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC-C--CCTTCC
T ss_pred HHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCc-C--hhhcCC
Confidence 778888888888888888874 5667777888888888888888 6777788888888888888888754 2 667788
Q ss_pred ccccccCCCcccccCCCCCCCCccCccccccCcccccCC
Q 048430 565 LVDFNVSFNGLEGEIPSGGPFVNFTADSFKQNYALCGSS 603 (973)
Q Consensus 565 L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~~c~~~ 603 (973)
|+.|++++|+++|..+. ..+..+....+.++...|+.+
T Consensus 347 L~~L~l~~N~~~~~~~~-~~~~~~~~~~~~~~~~~C~~~ 384 (597)
T 3oja_B 347 LKNLTLSHNDWDCNSLR-ALFRNVARPAVDDADQHCKID 384 (597)
T ss_dssp CSEEECCSSCEEHHHHH-HHTTTCCTTTBCCCCCCCCTT
T ss_pred CCEEEeeCCCCCChhHH-HHHHHHhhhccccccccCCcc
Confidence 88899999988876432 233445555677888888864
No 284
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=4.6e-35 Score=321.00 Aligned_cols=254 Identities=33% Similarity=0.526 Sum_probs=233.9
Q ss_pred cceeecccCCccc--cCCCCCCCCCcccEEEeec-CccccccCcccCCCCCCCEEEccCCcCCCCCchhhhccCcCCeee
Q 048430 349 LENFYAGSSQLSG--GIPVGFGNLSNLLVLSLVN-NELAGAIPTVLGKLQKLQGLDLNSNKLKGFIPTDLCKLEKLNTLL 425 (973)
Q Consensus 349 l~~l~l~~n~l~~--~~p~~~~~l~~L~~L~Ls~-n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 425 (973)
++.+++.+|.+++ .+|..|..+++|++|++++ |.+.+.+|..|..+++|++|+|++|++++.+|..+.++++|++|+
T Consensus 52 l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ 131 (313)
T 1ogq_A 52 VNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLD 131 (313)
T ss_dssp EEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEE
T ss_pred EEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEe
Confidence 4444444444444 5666678889999999995 999999999999999999999999999999999999999999999
Q ss_pred cCCccccCcCcccccCcCCCCeeeccCCCCCCCCcccccccc-cccEEEecCCcccCCcCcCccCCCCCCeEEccCCcCc
Q 048430 426 SNNNALQGQIPTCLANLTSLRHLDFRSNSLNSTIPSTFWSLK-YILAVDFSLNSLSGSLPLNIGNLEALGGLNLTGNQLS 504 (973)
Q Consensus 426 l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 504 (973)
+++|.+++.+|..+..+++|++|++++|++++.+|..+..++ +|+.|++++|++++.+|..+..+. |+.|+|++|+++
T Consensus 132 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~ 210 (313)
T 1ogq_A 132 FSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLE 210 (313)
T ss_dssp CCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEE
T ss_pred CCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCccc
Confidence 999999999999999999999999999999999999999998 999999999999999999999997 999999999999
Q ss_pred ccCCcccccCCcCCEEEcccCccccCCCCCcccccccccccccccccCCCCCccccccccccccccCCCcccccCCCCCC
Q 048430 505 GYIPSSIGNLKNLDWLALARNAFQGPIPQSFGSLISLQSLDLSGNNISGEIPKSLEKLSRLVDFNVSFNGLEGEIPSGGP 584 (973)
Q Consensus 505 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~~~ 584 (973)
+.+|..|+.+++|+.|+|++|++++.+|. +..+++|++|+|++|+|++.+|..+..+++|+.|++++|+++|.+|..+.
T Consensus 211 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~~~ 289 (313)
T 1ogq_A 211 GDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGN 289 (313)
T ss_dssp ECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCSTT
T ss_pred CcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCCcc
Confidence 99999999999999999999999977776 88999999999999999999999999999999999999999999999888
Q ss_pred CCccCccccccCcccccCCc
Q 048430 585 FVNFTADSFKQNYALCGSSR 604 (973)
Q Consensus 585 ~~~~~~~~~~~n~~~c~~~~ 604 (973)
+.++....+.+|+++||.|.
T Consensus 290 l~~L~~l~l~~N~~lc~~p~ 309 (313)
T 1ogq_A 290 LQRFDVSAYANNKCLCGSPL 309 (313)
T ss_dssp GGGSCGGGTCSSSEEESTTS
T ss_pred ccccChHHhcCCCCccCCCC
Confidence 88999999999999999874
No 285
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=100.00 E-value=8.2e-35 Score=320.88 Aligned_cols=268 Identities=19% Similarity=0.308 Sum_probs=201.9
Q ss_pred ChHHHHhhhccCCCcccCCCCCCCCCCCCCCcceEEEEEeeC--------CCCcEEEEecCCCCCCCcCCCCCCCCCCCc
Q 048430 1 ALVQLKARISLDPHNFFANNWNLSPTNTSASVCNWVGVTCSI--------RHGRVAALSLPNLSLGGTLPPHVGNLSFLV 72 (973)
Q Consensus 1 al~~~k~~~~~~~~~~~~~~w~~~~~~~~~~~c~w~gv~C~~--------~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~ 72 (973)
||++||++++.||.+++++ |... .....++|.|.||+|+. ...+|+.|++++++++ .+|+.++.+++|+
T Consensus 31 aLl~~k~~~~~~~~~~~~~-w~~~-~~~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~l~~l~~L~ 107 (328)
T 4fcg_A 31 VLSQWQRHYNADRNRWHSA-WRQA-NSNNPQIETRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQAFRLSHLQ 107 (328)
T ss_dssp HHHHHHHHHHHCCTTHHHH-HHHH-TTTCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCSCGGGGTTCS
T ss_pred HHHHHHHhccCCchhhhhh-hccc-ccccccccccCCcchhhhHHHHhcccccceeEEEccCCCch-hcChhhhhCCCCC
Confidence 6999999998899887775 8411 12357899999999953 4578999999999998 8899999999999
Q ss_pred EEEecCCCCCCCCCcccccccCCcEEEccCCCCCCCCCccccCCCCCccEEEeeCcccCCCCCccccC---------CCC
Q 048430 73 SLNISGNSFYDTLPNELWHMRRLKIIDFSSNSLSGSLPGDMCNSFTQLESFDVSSNKITGEFPSAIVN---------ISS 143 (973)
Q Consensus 73 ~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~---------l~~ 143 (973)
+|+|++|.+. .+|..++++++|++|+|++|.++ .+|..+ ..+++|++|+|++|++.+.+|..+.. +++
T Consensus 108 ~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l-~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~l~~ 184 (328)
T 4fcg_A 108 HMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASI-ASLNRLRELSIRACPELTELPEPLASTDASGEHQGLVN 184 (328)
T ss_dssp EEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGG-GGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEESTT
T ss_pred EEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHH-hcCcCCCEEECCCCCCccccChhHhhccchhhhccCCC
Confidence 9999999996 88999999999999999999998 788764 77899999999998888888887654 555
Q ss_pred CCeEEccCccccccCCccccCCCCCccEEEcccccccccCCCCCCCccccCCCCccEEEecCCcccCccccccccCCcce
Q 048430 144 LKSIRLDNNSLSGSFPTDLCTRLPSLVQLRLLGNNITGRIPNREIPNEIGNLHNLKILDLGGNNIAGLIPSMIFNNSNMV 223 (973)
Q Consensus 144 L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~ 223 (973)
|++|+|++|+++ .+|.. +..+++|++|+|++|+++ .+|..++.+++|++|+|++|.+.+.+|..+..
T Consensus 185 L~~L~L~~n~l~-~lp~~-l~~l~~L~~L~L~~N~l~------~l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~----- 251 (328)
T 4fcg_A 185 LQSLRLEWTGIR-SLPAS-IANLQNLKSLKIRNSPLS------ALGPAIHHLPKLEELDLRGCTALRNYPPIFGG----- 251 (328)
T ss_dssp CCEEEEEEECCC-CCCGG-GGGCTTCCEEEEESSCCC------CCCGGGGGCTTCCEEECTTCTTCCBCCCCTTC-----
T ss_pred CCEEECcCCCcC-cchHh-hcCCCCCCEEEccCCCCC------cCchhhccCCCCCEEECcCCcchhhhHHHhcC-----
Confidence 555555555555 55544 244555555555555554 23444555555555555555555554544443
Q ss_pred eEEeecccccccCCCCCCccccceeeeccccccccCcchhcccCcccEEEeccccccccCCCcccccccceEEEccCCcC
Q 048430 224 AILLYGNHLSGHLPSSIYLPNLENLFLWKNNLSGIIPDSICNASEATILELSSNLFSGLVPNTFGNCRQLQILSLGDNQL 303 (973)
Q Consensus 224 ~L~l~~n~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l 303 (973)
+++|++|+|++|++.+.+|..+..+++|++|+|++|++.+.+|..++++++|+.+++..|.+
T Consensus 252 ------------------l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~ 313 (328)
T 4fcg_A 252 ------------------RAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQ 313 (328)
T ss_dssp ------------------CCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGS
T ss_pred ------------------CCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHH
Confidence 77788888888888878888888888888888888888888888888888888888887766
Q ss_pred CC
Q 048430 304 TT 305 (973)
Q Consensus 304 ~~ 305 (973)
..
T Consensus 314 ~~ 315 (328)
T 4fcg_A 314 AQ 315 (328)
T ss_dssp CC
T ss_pred HH
Confidence 54
No 286
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=1.6e-35 Score=347.81 Aligned_cols=268 Identities=24% Similarity=0.294 Sum_probs=199.2
Q ss_pred hcCCCCCccccccCceEEEEEEe-CCCeEEEEEEEecc-chhhHHHHHHHHHHHHhccCCceeEEEeeeec------CCe
Q 048430 679 TNGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQ-EDRALKSFDTECEVMRRIRHRNLIKIVSSCSN------PGF 750 (973)
Q Consensus 679 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~------~~~ 750 (973)
.++|...+.||+|+||.||+|.. .+|+.||||+++.. .....+.+.+|++++++++||||+++++++.. .+.
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~ 92 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL 92 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence 47899999999999999999985 56899999998654 33446789999999999999999999998765 677
Q ss_pred eEEEEEecCCCCHHHHhhhCC--CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCc---EEEeecc
Q 048430 751 KALIMQYMPQGSLEKWLYSHN--YSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMV---AHLGDFG 825 (973)
Q Consensus 751 ~~lv~e~~~~gsL~~~l~~~~--~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~---~kl~Dfg 825 (973)
.++||||+++|+|.+++.... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++. +||+|||
T Consensus 93 ~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLH---s~gIVHrDLKP~NILl~~~g~~~~vKL~DFG 169 (676)
T 3qa8_A 93 PLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLH---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLG 169 (676)
T ss_dssp CCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHH---HTTBCCCCCCSTTEEEECCSSSCEEEECSCC
T ss_pred EEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHeEeecCCCceeEEEcccc
Confidence 899999999999999998754 35889999999999999999999 789999999999999997664 9999999
Q ss_pred cccccCCCCCcccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhh
Q 048430 826 IAKLLDGVDPVTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTE 905 (973)
Q Consensus 826 la~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 905 (973)
.+....... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||.... ....|...........
T Consensus 170 ~a~~~~~~~--~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~----~~~~~~~~i~~~~~~~ 243 (676)
T 3qa8_A 170 YAKELDQGE--LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNW----QPVQWHGKVREKSNEH 243 (676)
T ss_dssp CCCBTTSCC--CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSC----HHHHSSTTCC------
T ss_pred ccccccccc--ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCccc----chhhhhhhhhcccchh
Confidence 998764322 2334579999999999999999999999999999999999999986532 1122211111100000
Q ss_pred -hcccccCCCC--chhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHH
Q 048430 906 -VVDANLLSRE--DEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDAL 955 (973)
Q Consensus 906 -~~d~~l~~~~--~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl 955 (973)
.......... .............+++.+.+++.+||+.||++|||++|++
T Consensus 244 ~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL 296 (676)
T 3qa8_A 244 IVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNP 296 (676)
T ss_dssp CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCC
T ss_pred hhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHh
Confidence 0000000000 0000000011223577899999999999999999999855
No 287
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=7.6e-33 Score=309.06 Aligned_cols=307 Identities=23% Similarity=0.376 Sum_probs=189.1
Q ss_pred CCCCCCCcEEEecCCCCCCCCCcccccccCCcEEEccCCCCCCCCCccccCCCCCccEEEeeCcccCCCCCccccCCCCC
Q 048430 65 VGNLSFLVSLNISGNSFYDTLPNELWHMRRLKIIDFSSNSLSGSLPGDMCNSFTQLESFDVSSNKITGEFPSAIVNISSL 144 (973)
Q Consensus 65 l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 144 (973)
+..+++|++|++++|.+. .+| .+..+++|++|++++|++. .+|. +..+++|++|++++|.+++ +| .+.++++|
T Consensus 40 ~~~l~~L~~L~l~~~~i~-~~~-~~~~~~~L~~L~l~~n~i~-~~~~--~~~l~~L~~L~L~~n~i~~-~~-~~~~l~~L 112 (347)
T 4fmz_A 40 QEELESITKLVVAGEKVA-SIQ-GIEYLTNLEYLNLNGNQIT-DISP--LSNLVKLTNLYIGTNKITD-IS-ALQNLTNL 112 (347)
T ss_dssp HHHHTTCSEEECCSSCCC-CCT-TGGGCTTCCEEECCSSCCC-CCGG--GTTCTTCCEEECCSSCCCC-CG-GGTTCTTC
T ss_pred chhcccccEEEEeCCccc-cch-hhhhcCCccEEEccCCccc-cchh--hhcCCcCCEEEccCCcccC-ch-HHcCCCcC
Confidence 346677777777777774 344 3777777777777777776 4554 5677777777777777774 33 57777777
Q ss_pred CeEEccCccccccCCccccCCCCCccEEEcccccccccCCCCCCCccccCCCCccEEEecCCcccCccccccccCCccee
Q 048430 145 KSIRLDNNSLSGSFPTDLCTRLPSLVQLRLLGNNITGRIPNREIPNEIGNLHNLKILDLGGNNIAGLIPSMIFNNSNMVA 224 (973)
Q Consensus 145 ~~L~L~~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~ 224 (973)
++|++++|.++ .++. +..+++|++|++++|.... .+..+..+++|++|++++|.+.+..+ +..
T Consensus 113 ~~L~l~~n~i~-~~~~--~~~l~~L~~L~l~~n~~~~------~~~~~~~l~~L~~L~l~~~~~~~~~~--~~~------ 175 (347)
T 4fmz_A 113 RELYLNEDNIS-DISP--LANLTKMYSLNLGANHNLS------DLSPLSNMTGLNYLTVTESKVKDVTP--IAN------ 175 (347)
T ss_dssp SEEECTTSCCC-CCGG--GTTCTTCCEEECTTCTTCC------CCGGGTTCTTCCEEECCSSCCCCCGG--GGG------
T ss_pred CEEECcCCccc-Cchh--hccCCceeEEECCCCCCcc------cccchhhCCCCcEEEecCCCcCCchh--hcc------
Confidence 77777777776 4444 4567777777777775432 22346777777777777777764433 334
Q ss_pred EEeecccccccCCCCCCccccceeeeccccccccCcchhcccCcccEEEeccccccccCCCcccccccceEEEccCCcCC
Q 048430 225 ILLYGNHLSGHLPSSIYLPNLENLFLWKNNLSGIIPDSICNASEATILELSSNLFSGLVPNTFGNCRQLQILSLGDNQLT 304 (973)
Q Consensus 225 L~l~~n~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~ 304 (973)
+++|++|++++|.+.+..+ +..+++|+.|++++|.+.+..+ +..+++|++|++++|+++
T Consensus 176 -----------------l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~ 234 (347)
T 4fmz_A 176 -----------------LTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKIT 234 (347)
T ss_dssp -----------------CTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCC
T ss_pred -----------------CCCCCEEEccCCccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccC
Confidence 5666667777776664322 6667777777777777776544 667777777777777776
Q ss_pred CCCCCcchhhhhhhccCCcCcEEEccCCCCCCCCCCcccccccccceeecccCCccccCCCCCCCCCcccEEEeecCccc
Q 048430 305 TGSSAQGQIFYSSLAKCRYLRVLVLDTNPLKGVIPNSIGNLSTSLENFYAGSSQLSGGIPVGFGNLSNLLVLSLVNNELA 384 (973)
Q Consensus 305 ~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~ 384 (973)
..+ .+..+++|+.|++++|.+++. ..+..+++|++|++++|+++
T Consensus 235 ~~~---------~~~~l~~L~~L~l~~n~l~~~---------------------------~~~~~l~~L~~L~l~~n~l~ 278 (347)
T 4fmz_A 235 DLS---------PLANLSQLTWLEIGTNQISDI---------------------------NAVKDLTKLKMLNVGSNQIS 278 (347)
T ss_dssp CCG---------GGTTCTTCCEEECCSSCCCCC---------------------------GGGTTCTTCCEEECCSSCCC
T ss_pred CCc---------chhcCCCCCEEECCCCccCCC---------------------------hhHhcCCCcCEEEccCCccC
Confidence 421 144555555555555555421 11344555666666666665
Q ss_pred cccCcccCCCCCCCEEEccCCcCCCCCchhhhccCcCCeeecCCccccCcCcccccCcCCCCeeeccCCCCC
Q 048430 385 GAIPTVLGKLQKLQGLDLNSNKLKGFIPTDLCKLEKLNTLLSNNNALQGQIPTCLANLTSLRHLDFRSNSLN 456 (973)
Q Consensus 385 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 456 (973)
+. ..+..+++|++|++++|++++..+..+..+++|+.|++++|++++..| +..+++|++|++++|.|+
T Consensus 279 ~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 279 DI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp CC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred CC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 32 235555666666666666655555555555555555555555554444 455555555555555543
No 288
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=4.4e-33 Score=310.98 Aligned_cols=174 Identities=21% Similarity=0.353 Sum_probs=90.0
Q ss_pred ccccccCCcEEEccCCCCCCCCCccccCCCCCccEEEeeCcccCCCCCccccCCCCCCeEEccCccccccCCccccCCCC
Q 048430 88 ELWHMRRLKIIDFSSNSLSGSLPGDMCNSFTQLESFDVSSNKITGEFPSAIVNISSLKSIRLDNNSLSGSFPTDLCTRLP 167 (973)
Q Consensus 88 ~~~~l~~L~~L~Ls~n~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~ 167 (973)
.+..+++|+.|++++|.+. .+|. +..+++|++|++++|++++ +|. +.++++|++|++++|.++ .+| .+..++
T Consensus 39 ~~~~l~~L~~L~l~~~~i~-~~~~--~~~~~~L~~L~l~~n~i~~-~~~-~~~l~~L~~L~L~~n~i~-~~~--~~~~l~ 110 (347)
T 4fmz_A 39 TQEELESITKLVVAGEKVA-SIQG--IEYLTNLEYLNLNGNQITD-ISP-LSNLVKLTNLYIGTNKIT-DIS--ALQNLT 110 (347)
T ss_dssp CHHHHTTCSEEECCSSCCC-CCTT--GGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCC-CCG--GGTTCT
T ss_pred cchhcccccEEEEeCCccc-cchh--hhhcCCccEEEccCCcccc-chh-hhcCCcCCEEEccCCccc-Cch--HHcCCC
Confidence 3455666666666666665 4443 3556666666666666663 332 556666666666666655 333 234455
Q ss_pred CccEEEcccccccccCCCCCCCccccCCCCccEEEecCCcccCccccccccCCcceeEEeecccccccCCCCCCccccce
Q 048430 168 SLVQLRLLGNNITGRIPNREIPNEIGNLHNLKILDLGGNNIAGLIPSMIFNNSNMVAILLYGNHLSGHLPSSIYLPNLEN 247 (973)
Q Consensus 168 ~L~~L~L~~N~l~~~~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~l~~L~~ 247 (973)
+|++|+|++|+++ .+|. +..+++|++|++++|.....++ ....+++|++
T Consensus 111 ~L~~L~l~~n~i~------~~~~-~~~l~~L~~L~l~~n~~~~~~~------------------------~~~~l~~L~~ 159 (347)
T 4fmz_A 111 NLRELYLNEDNIS------DISP-LANLTKMYSLNLGANHNLSDLS------------------------PLSNMTGLNY 159 (347)
T ss_dssp TCSEEECTTSCCC------CCGG-GTTCTTCCEEECTTCTTCCCCG------------------------GGTTCTTCCE
T ss_pred cCCEEECcCCccc------Cchh-hccCCceeEEECCCCCCccccc------------------------chhhCCCCcE
Confidence 5555555555554 1222 4444455555555443322211 1122555666
Q ss_pred eeeccccccccCcchhcccCcccEEEeccccccccCCCcccccccceEEEccCCcCC
Q 048430 248 LFLWKNNLSGIIPDSICNASEATILELSSNLFSGLVPNTFGNCRQLQILSLGDNQLT 304 (973)
Q Consensus 248 L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~ 304 (973)
|++++|.+.+..+ +..+++|+.|++++|.+.+..+ +..+++|+.|++++|.++
T Consensus 160 L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~ 212 (347)
T 4fmz_A 160 LTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQIT 212 (347)
T ss_dssp EECCSSCCCCCGG--GGGCTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCC
T ss_pred EEecCCCcCCchh--hccCCCCCEEEccCCccccccc--ccCCCccceeecccCCCC
Confidence 6666666554322 5555556666666555554433 445555555555555444
No 289
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=6e-34 Score=307.67 Aligned_cols=235 Identities=13% Similarity=0.088 Sum_probs=186.1
Q ss_pred cCCCCCccccccCceEEEEEEeC-CCeEEEEEEEeccc---hhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEEE
Q 048430 680 NGFGESNLLGSGSFDNVYKATLA-NGVSVAVKVFNLQE---DRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALIM 755 (973)
Q Consensus 680 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 755 (973)
++|...+.||+|+||.||+|... +++.||||++.... ....+.+.+|+.++++++||||+++++++.+.+..|+||
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 110 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA 110 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence 56888999999999999999965 58999999997543 334578999999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCCCC
Q 048430 756 QYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGVDP 835 (973)
Q Consensus 756 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 835 (973)
||+++++|.+++... ....++..++.|++.||+||| +.+|+||||||+||+++.++.+||+++|
T Consensus 111 e~~~g~~L~~~l~~~---~~~~~~~~i~~ql~~aL~~lH---~~givH~Dikp~NIll~~~g~~kl~~~~---------- 174 (286)
T 3uqc_A 111 EWIRGGSLQEVADTS---PSPVGAIRAMQSLAAAADAAH---RAGVALSIDHPSRVRVSIDGDVVLAYPA---------- 174 (286)
T ss_dssp ECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEEETTSCEEECSCC----------
T ss_pred EecCCCCHHHHHhcC---CChHHHHHHHHHHHHHHHHHH---HCCCccCCCCcccEEEcCCCCEEEEecc----------
Confidence 999999999999653 466678999999999999999 7999999999999999999999998543
Q ss_pred cccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhcccccCCCC
Q 048430 836 VTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLLSRE 915 (973)
Q Consensus 836 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 915 (973)
|++ .++.++|||||||++|||++|+.||......+. +.. ........
T Consensus 175 -----------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~-------------~~~-~~~~~~~~- 221 (286)
T 3uqc_A 175 -----------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSG-------------LAP-AERDTAGQ- 221 (286)
T ss_dssp -----------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCC-------------SEE-CCBCTTSC-
T ss_pred -----------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchh-------------hHH-HHHHhccC-
Confidence 333 268999999999999999999999976332210 000 00000000
Q ss_pred chhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHHHHHh
Q 048430 916 DEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIKKILTQ 967 (973)
Q Consensus 916 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~~~~~~ 967 (973)
..........+++++.+++.+||+.||++| |+.|+++.|+++.....+
T Consensus 222 ---~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~~~~ 269 (286)
T 3uqc_A 222 ---PIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATAVADR 269 (286)
T ss_dssp ---BCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC----
T ss_pred ---CCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhccCCc
Confidence 000011122456779999999999999999 999999999998765443
No 290
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=3.9e-34 Score=347.46 Aligned_cols=242 Identities=19% Similarity=0.292 Sum_probs=195.8
Q ss_pred cCCCCCccccccCceEEEEEEeC--CCeEEEEEEEeccc-hhhHHHHHHHHHHHHhccCCceeEEEeeeecCCe-----e
Q 048430 680 NGFGESNLLGSGSFDNVYKATLA--NGVSVAVKVFNLQE-DRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGF-----K 751 (973)
Q Consensus 680 ~~~~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~-----~ 751 (973)
++|...++||+|+||.||+|... +++.||||++.... ....+.+.+|+.++++++||||+++++++...+. .
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~ 159 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVG 159 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCcee
Confidence 67889999999999999999965 68999999886443 3445678999999999999999999999976555 6
Q ss_pred EEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccC
Q 048430 752 ALIMQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLD 831 (973)
Q Consensus 752 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~ 831 (973)
|+||||+++++|.+++.. .+++.+++.++.||+.||.||| +.+||||||||+||+++.+ .+||+|||+++...
T Consensus 160 ~lv~E~~~g~~L~~~~~~---~l~~~~~~~~~~qi~~aL~~lH---~~giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~ 232 (681)
T 2pzi_A 160 YIVMEYVGGQSLKRSKGQ---KLPVAEAIAYLLEILPALSYLH---SIGLVYNDLKPENIMLTEE-QLKLIDLGAVSRIN 232 (681)
T ss_dssp EEEEECCCCEECC----C---CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECSS-CEEECCCTTCEETT
T ss_pred EEEEEeCCCCcHHHHHhC---CCCHHHHHHHHHHHHHHHHHHH---HCCCeecccChHHeEEeCC-cEEEEecccchhcc
Confidence 999999999999988764 6899999999999999999999 7899999999999999986 89999999998764
Q ss_pred CCCCcccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhccccc
Q 048430 832 GVDPVTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANL 911 (973)
Q Consensus 832 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 911 (973)
.. ....||+.|+|||.+.+.. +.++|||||||++|||++|..||........
T Consensus 233 ~~-----~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~---------------------- 284 (681)
T 2pzi_A 233 SF-----GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVDGL---------------------- 284 (681)
T ss_dssp CC-----SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECSSC----------------------
T ss_pred cC-----CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCcccccccc----------------------
Confidence 32 3456999999999876654 8999999999999999999888754221110
Q ss_pred CCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCC-HHHHHHHHHHHHHHH
Q 048430 912 LSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERIN-VKDALADLKKIKKIL 965 (973)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt-~~evl~~L~~~~~~~ 965 (973)
.. .......++.+.+++.+||+.||++||+ ++++.+.|.++.+..
T Consensus 285 ~~---------~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~~~ 330 (681)
T 2pzi_A 285 PE---------DDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVLREV 330 (681)
T ss_dssp CT---------TCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHHHH
T ss_pred cc---------cccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHHHHh
Confidence 00 0011123466889999999999999995 667777777766543
No 291
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=1.4e-33 Score=307.73 Aligned_cols=231 Identities=21% Similarity=0.293 Sum_probs=180.4
Q ss_pred hcCCCCC-ccccccCceEEEEEEe-CCCeEEEEEEEeccchhhHHHHHHHHHHH-HhccCCceeEEEeeeec----CCee
Q 048430 679 TNGFGES-NLLGSGSFDNVYKATL-ANGVSVAVKVFNLQEDRALKSFDTECEVM-RRIRHRNLIKIVSSCSN----PGFK 751 (973)
Q Consensus 679 ~~~~~~~-~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l-~~l~h~niv~l~~~~~~----~~~~ 751 (973)
.++|... +.||+|+||.||+|.. .+++.||+|+++.. ..+.+|+.++ +..+||||+++++++.. ....
T Consensus 16 ~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 90 (299)
T 3m2w_A 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 90 (299)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred ccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc-----HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceE
Confidence 3456666 7899999999999986 57899999998633 4567888888 55689999999999876 6778
Q ss_pred EEEEEecCCCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCC---CCcEEEeecccc
Q 048430 752 ALIMQYMPQGSLEKWLYSHN-YSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDD---DMVAHLGDFGIA 827 (973)
Q Consensus 752 ~lv~e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~---~~~~kl~Dfgla 827 (973)
++||||+++|+|.+++.... ..+++..+..++.|++.||+||| +.+|+||||||+||+++. ++.+||+|||++
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a 167 (299)
T 3m2w_A 91 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 167 (299)
T ss_dssp EEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSTTCCEEECCCTTC
T ss_pred EEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEecCCCCCcEEEeccccc
Confidence 99999999999999998754 46999999999999999999999 799999999999999998 789999999998
Q ss_pred cccCCCCCcccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhc
Q 048430 828 KLLDGVDPVTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVV 907 (973)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (973)
.... +..++.++|||||||++|||++|+.||........ ....
T Consensus 168 ~~~~-----------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~---------~~~~----- 210 (299)
T 3m2w_A 168 KETT-----------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI---------SPGM----- 210 (299)
T ss_dssp EECT-----------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC----------------CCS-----
T ss_pred cccc-----------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhh---------hHHH-----
Confidence 7542 13467899999999999999999999865321110 0000
Q ss_pred ccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430 908 DANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD 957 (973)
Q Consensus 908 d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~ 957 (973)
.......... ........++.++.+++.+||+.||++||+++|+++|
T Consensus 211 ~~~~~~~~~~---~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 257 (299)
T 3m2w_A 211 KTRIRMGQYE---FPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 257 (299)
T ss_dssp CCSSCTTCCS---SCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHHhhcccc---CCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 0000000000 0011112356789999999999999999999999987
No 292
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=1.4e-34 Score=329.71 Aligned_cols=250 Identities=19% Similarity=0.214 Sum_probs=186.2
Q ss_pred cCCCCCccccccCceEEEEEE-eCCCeEEEEEEEeccch---hhHHHHHHHHHHHHhccC-Ccee---------------
Q 048430 680 NGFGESNLLGSGSFDNVYKAT-LANGVSVAVKVFNLQED---RALKSFDTECEVMRRIRH-RNLI--------------- 739 (973)
Q Consensus 680 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h-~niv--------------- 739 (973)
..|...++||+|+||.||+|+ ..+|+.||||+++.... ...+.+.+|+.+++.++| +|..
T Consensus 78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 157 (413)
T 3dzo_A 78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV 157 (413)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEE
T ss_pred eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhc
Confidence 346667899999999999999 45799999999874322 235789999999999976 2211
Q ss_pred ------EEEeeeec-----CCeeEEEEEecCCCCHHHHhh------hCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeE
Q 048430 740 ------KIVSSCSN-----PGFKALIMQYMPQGSLEKWLY------SHNYSLTIRQRLDIMIDVASALEYLHHGYSTPII 802 (973)
Q Consensus 740 ------~l~~~~~~-----~~~~~lv~e~~~~gsL~~~l~------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iv 802 (973)
.++.++.. ....+++|+++ +++|.+++. .....+++..+..++.|+++||+||| +++|+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ii 233 (413)
T 3dzo_A 158 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH---HYGLV 233 (413)
T ss_dssp ECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHH---HTTEE
T ss_pred ccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHH---hCCcc
Confidence 11111111 22456777765 679999884 22345788899999999999999999 79999
Q ss_pred EccCCCCcEEeCCCCcEEEeecccccccCCCCCcccccccccccccCccCC----------CCCCCCcchhHHHHHHHHH
Q 048430 803 HCDLKPNNVLLDDDMVAHLGDFGIAKLLDGVDPVTQTMTLATIGYMAPEYG----------SEGIVSISGDVYSFGILMM 872 (973)
Q Consensus 803 H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~y~aPE~~----------~~~~~~~~sDvws~Gvvl~ 872 (973)
||||||+|||++.++.+||+|||+++..... .....| +.|+|||.+ ....++.++|||||||++|
T Consensus 234 HrDiKp~NILl~~~~~~kL~DFG~a~~~~~~----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~ 308 (413)
T 3dzo_A 234 HTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIY 308 (413)
T ss_dssp CSCCCGGGEEECTTCCEEECCGGGCEETTEE----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHH
T ss_pred cCCcccceEEEecCCeEEEEeccceeecCCc----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHH
Confidence 9999999999999999999999998865321 334467 999999987 5667899999999999999
Q ss_pred HHHhCCCCCCccccCcccHHHHHHhhCCcchhhhcccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHH
Q 048430 873 ETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVK 952 (973)
Q Consensus 873 elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ 952 (973)
||++|+.||......+. .+..+... ..+++++.+++.+||+.||++||++.
T Consensus 309 elltg~~Pf~~~~~~~~-----------------~~~~~~~~------------~~~~~~~~~li~~~l~~dP~~Rpt~~ 359 (413)
T 3dzo_A 309 WIWCADLPNTDDAALGG-----------------SEWIFRSC------------KNIPQPVRALLEGFLRYPKEDRLLPL 359 (413)
T ss_dssp HHHHSSCCCCTTGGGSC-----------------SGGGGSSC------------CCCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred HHHHCCCCCCCcchhhh-----------------HHHHHhhc------------ccCCHHHHHHHHHHccCChhhCcCHH
Confidence 99999999965322110 00001100 02346689999999999999999999
Q ss_pred HHHHH--HHHHHHHHHh
Q 048430 953 DALAD--LKKIKKILTQ 967 (973)
Q Consensus 953 evl~~--L~~~~~~~~~ 967 (973)
|++++ ++++.+.+..
T Consensus 360 ~~l~~~~~~~~~~~~~~ 376 (413)
T 3dzo_A 360 QAMETPEYEQLRTELSA 376 (413)
T ss_dssp HHTTSHHHHHHHHHHHH
T ss_pred HHHhCHHHHHHHHHHHH
Confidence 99887 6666655543
No 293
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=2.4e-32 Score=302.73 Aligned_cols=268 Identities=22% Similarity=0.276 Sum_probs=152.4
Q ss_pred cccceeeeccccccccCcchhcccCcccEEEeccccccccCCCcccccccceEEEccCCcCCCCCCCcchhhhhhhccCC
Q 048430 243 PNLENLFLWKNNLSGIIPDSICNASEATILELSSNLFSGLVPNTFGNCRQLQILSLGDNQLTTGSSAQGQIFYSSLAKCR 322 (973)
Q Consensus 243 ~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~ 322 (973)
++|++|++++|++++..++.|..+++|++|+|++|.++++.|..|+++++|++|++++|+++.++... . +
T Consensus 54 ~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~--------~--~ 123 (332)
T 2ft3_A 54 PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPPNL--------P--S 123 (332)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCCSCCSSC--------C--T
T ss_pred CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCCccCccc--------c--c
Confidence 56777777777777766677777777777777777777777777777777777777777776533221 0 3
Q ss_pred cCcEEEccCCCCCCCCCCcccccccccceeecccCCccccCCCCCCCCCcccEEEeecCccc--cccCcccCCCCCCCEE
Q 048430 323 YLRVLVLDTNPLKGVIPNSIGNLSTSLENFYAGSSQLSGGIPVGFGNLSNLLVLSLVNNELA--GAIPTVLGKLQKLQGL 400 (973)
Q Consensus 323 ~L~~L~L~~N~l~~~~p~~~~~l~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~--~~~p~~~~~l~~L~~L 400 (973)
+|++|++++|++.+.. +..|..+++|++|++++|.++ +..+..+..+ +|++|
T Consensus 124 ~L~~L~l~~n~i~~~~-------------------------~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L 177 (332)
T 2ft3_A 124 SLVELRIHDNRIRKVP-------------------------KGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYL 177 (332)
T ss_dssp TCCEEECCSSCCCCCC-------------------------SGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCC
T ss_pred cCCEEECCCCccCccC-------------------------HhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEE
Confidence 3444444444443211 112444555555555555553 2344444444 55555
Q ss_pred EccCCcCCCCCchhhhccCcCCeeecCCccccCcCcccccCcCCCCeeeccCCCCCCCCcccccccccccEEEecCCccc
Q 048430 401 DLNSNKLKGFIPTDLCKLEKLNTLLSNNNALQGQIPTCLANLTSLRHLDFRSNSLNSTIPSTFWSLKYILAVDFSLNSLS 480 (973)
Q Consensus 401 ~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~ 480 (973)
++++|++++ +|..+ . ++|++|++++|++++..+..|..+++|+.|++++|+++
T Consensus 178 ~l~~n~l~~-l~~~~------------------------~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~ 230 (332)
T 2ft3_A 178 RISEAKLTG-IPKDL------------------------P--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIR 230 (332)
T ss_dssp BCCSSBCSS-CCSSS------------------------C--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCC
T ss_pred ECcCCCCCc-cCccc------------------------c--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCC
Confidence 555555553 23222 1 34555555555555544455555555555555555555
Q ss_pred CCcCcCccCCCCCCeEEccCCcCcccCCcccccCCcCCEEEcccCccccCCCCCcccc------cccccccccccccC--
Q 048430 481 GSLPLNIGNLEALGGLNLTGNQLSGYIPSSIGNLKNLDWLALARNAFQGPIPQSFGSL------ISLQSLDLSGNNIS-- 552 (973)
Q Consensus 481 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l------~~L~~L~Ls~N~l~-- 552 (973)
+..+..+..+++|+.|+|++|+++ .+|..+..+++|+.|+|++|++++..+..|..+ .+|+.|++++|.+.
T Consensus 231 ~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~ 309 (332)
T 2ft3_A 231 MIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYW 309 (332)
T ss_dssp CCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGG
T ss_pred cCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHccccccccccccccceEeecCccccc
Confidence 444445555556666666666665 555556666666666666666665555555432 45666777777665
Q ss_pred CCCCccccccccccccccCCCc
Q 048430 553 GEIPKSLEKLSRLVDFNVSFNG 574 (973)
Q Consensus 553 ~~~p~~~~~l~~L~~l~ls~N~ 574 (973)
+..|..|..+++|+.+++++|+
T Consensus 310 ~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 310 EVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp GSCGGGGTTBCCSTTEEC----
T ss_pred ccCcccccccchhhhhhccccc
Confidence 4556666677777777776663
No 294
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=4.3e-32 Score=300.50 Aligned_cols=269 Identities=21% Similarity=0.258 Sum_probs=178.5
Q ss_pred cccceeeeccccccccCcchhcccCcccEEEeccccccccCCCcccccccceEEEccCCcCCCCCCCcchhhhhhhccCC
Q 048430 243 PNLENLFLWKNNLSGIIPDSICNASEATILELSSNLFSGLVPNTFGNCRQLQILSLGDNQLTTGSSAQGQIFYSSLAKCR 322 (973)
Q Consensus 243 ~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~ 322 (973)
++|++|+|++|+++++.+..|..+++|++|+|++|.++++.|..|+++++|++|++++|+++.++..
T Consensus 52 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~l~~~------------- 118 (330)
T 1xku_A 52 PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLKELPEK------------- 118 (330)
T ss_dssp TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCSBCCSS-------------
T ss_pred CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCCccChh-------------
Confidence 5677778888877777666777788888888888888777777777777777777777777643321
Q ss_pred cCcEEEccCCCCCCCCCCcccccccccceeecccCCccccCCCCCCCCCcccEEEeecCccccccCcccCCCCCCCEEEc
Q 048430 323 YLRVLVLDTNPLKGVIPNSIGNLSTSLENFYAGSSQLSGGIPVGFGNLSNLLVLSLVNNELAGAIPTVLGKLQKLQGLDL 402 (973)
Q Consensus 323 ~L~~L~L~~N~l~~~~p~~~~~l~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 402 (973)
+. ++|++|++++|.+++..+..|..+++|++|++
T Consensus 119 --------------------------------------------~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 152 (330)
T 1xku_A 119 --------------------------------------------MP--KTLQELRVHENEITKVRKSVFNGLNQMIVVEL 152 (330)
T ss_dssp --------------------------------------------CC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEEC
T ss_pred --------------------------------------------hc--ccccEEECCCCcccccCHhHhcCCccccEEEC
Confidence 11 34555555555555555555556666666666
Q ss_pred cCCcCCC--CCchhhhccCcCCeeecCCccccCcCcccccCcCCCCeeeccCCCCCCCCcccccccccccEEEecCCccc
Q 048430 403 NSNKLKG--FIPTDLCKLEKLNTLLSNNNALQGQIPTCLANLTSLRHLDFRSNSLNSTIPSTFWSLKYILAVDFSLNSLS 480 (973)
Q Consensus 403 s~N~l~~--~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~ 480 (973)
++|.+.. ..+..+.++++|+.|++++|.++. +|..+. ++|++|++++|++++..|..|..+++|+.|++++|+++
T Consensus 153 ~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~ 229 (330)
T 1xku_A 153 GTNPLKSSGIENGAFQGMKKLSYIRIADTNITT-IPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSIS 229 (330)
T ss_dssp CSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS-CCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCC
T ss_pred CCCcCCccCcChhhccCCCCcCEEECCCCcccc-CCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCc
Confidence 6666542 445555666666666666666653 333322 56777777777776666666777777777777777777
Q ss_pred CCcCcCccCCCCCCeEEccCCcCcccCCcccccCCcCCEEEcccCccccCCCCCcccc------cccccccccccccCC-
Q 048430 481 GSLPLNIGNLEALGGLNLTGNQLSGYIPSSIGNLKNLDWLALARNAFQGPIPQSFGSL------ISLQSLDLSGNNISG- 553 (973)
Q Consensus 481 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l------~~L~~L~Ls~N~l~~- 553 (973)
+..+..+..+++|+.|+|++|+++ .+|..+..+++|+.|+|++|+|++..+..|... ..|+.|++++|.+..
T Consensus 230 ~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~ 308 (330)
T 1xku_A 230 AVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYW 308 (330)
T ss_dssp EECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGG
T ss_pred eeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCccccc
Confidence 655666777777777777777777 667777777777777777777776666666433 667778888887753
Q ss_pred -CCCccccccccccccccCCCc
Q 048430 554 -EIPKSLEKLSRLVDFNVSFNG 574 (973)
Q Consensus 554 -~~p~~~~~l~~L~~l~ls~N~ 574 (973)
..|..|..+..++.++|++|+
T Consensus 309 ~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 309 EIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp GSCGGGGTTCCCGGGEEC----
T ss_pred ccCccccccccceeEEEecccC
Confidence 556777778888888888774
No 295
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=3.8e-32 Score=301.10 Aligned_cols=296 Identities=23% Similarity=0.325 Sum_probs=165.9
Q ss_pred CCCeEEccCccccccCCccccCCCCCccEEEcccccccccCCCCCCCccccCCCCccEEEecCCcccCccccccccCCcc
Q 048430 143 SLKSIRLDNNSLSGSFPTDLCTRLPSLVQLRLLGNNITGRIPNREIPNEIGNLHNLKILDLGGNNIAGLIPSMIFNNSNM 222 (973)
Q Consensus 143 ~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L 222 (973)
+|+.+++++|.++ .+|..++ ++|++|+|++|+|++. .|..|+++++|++|+|++|++++..|..|.+
T Consensus 34 ~l~~l~~~~~~l~-~ip~~~~---~~l~~L~l~~n~i~~~-----~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~---- 100 (332)
T 2ft3_A 34 HLRVVQCSDLGLK-AVPKEIS---PDTTLLDLQNNDISEL-----RKDDFKGLQHLYALVLVNNKISKIHEKAFSP---- 100 (332)
T ss_dssp ETTEEECCSSCCS-SCCSCCC---TTCCEEECCSSCCCEE-----CTTTTTTCTTCCEEECCSSCCCEECGGGSTT----
T ss_pred cCCEEECCCCCcc-ccCCCCC---CCCeEEECCCCcCCcc-----CHhHhhCCCCCcEEECCCCccCccCHhHhhC----
Confidence 4555555555555 5554432 3455555555555421 1234444555555555555544443443333
Q ss_pred eeEEeecccccccCCCCCCccccceeeeccccccccCcchhcccCcccEEEeccccccccCCCcccccccceEEEccCCc
Q 048430 223 VAILLYGNHLSGHLPSSIYLPNLENLFLWKNNLSGIIPDSICNASEATILELSSNLFSGLVPNTFGNCRQLQILSLGDNQ 302 (973)
Q Consensus 223 ~~L~l~~n~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~ 302 (973)
+++|++|+|++|+++. +|..+. ++|++|++++|+++++.+..|.++++|++|++++|+
T Consensus 101 -------------------l~~L~~L~L~~n~l~~-l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~ 158 (332)
T 2ft3_A 101 -------------------LRKLQKLYISKNHLVE-IPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNP 158 (332)
T ss_dssp -------------------CTTCCEEECCSSCCCS-CCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCC
T ss_pred -------------------cCCCCEEECCCCcCCc-cCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCc
Confidence 4555555555555552 333222 455555555555555544455555555555555554
Q ss_pred CCCCCCCcchhhhhhhccCCcCcEEEccCCCCCCCCCCcccccccccceeecccCCccccCCCCCCCCCcccEEEeecCc
Q 048430 303 LTTGSSAQGQIFYSSLAKCRYLRVLVLDTNPLKGVIPNSIGNLSTSLENFYAGSSQLSGGIPVGFGNLSNLLVLSLVNNE 382 (973)
Q Consensus 303 l~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~ 382 (973)
++. . +..|..|..+ +|++|++++|+
T Consensus 159 l~~-------------------------------~-----------------------~~~~~~~~~l-~L~~L~l~~n~ 183 (332)
T 2ft3_A 159 LEN-------------------------------S-----------------------GFEPGAFDGL-KLNYLRISEAK 183 (332)
T ss_dssp CBG-------------------------------G-----------------------GSCTTSSCSC-CCSCCBCCSSB
T ss_pred ccc-------------------------------C-----------------------CCCcccccCC-ccCEEECcCCC
Confidence 431 0 1223446666 89999999999
Q ss_pred cccccCcccCCCCCCCEEEccCCcCCCCCchhhhccCcCCeeecCCccccCcCcccccCcCCCCeeeccCCCCCCCCccc
Q 048430 383 LAGAIPTVLGKLQKLQGLDLNSNKLKGFIPTDLCKLEKLNTLLSNNNALQGQIPTCLANLTSLRHLDFRSNSLNSTIPST 462 (973)
Q Consensus 383 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~ 462 (973)
+++ +|..+. ++|++|+|++|.+++..+..+..+++|+.|++++|++++..+..+..+++|++|++++|+++ .+|..
T Consensus 184 l~~-l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~ 259 (332)
T 2ft3_A 184 LTG-IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAG 259 (332)
T ss_dssp CSS-CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTT
T ss_pred CCc-cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChh
Confidence 995 565544 68999999999998776677777777777777777777666666666666666666666665 44444
Q ss_pred ccccccccEEEecCCcccCCcCcCccCCCCCCeEEccCCcCcccCCcccccCCcCCEEEcccCccc--cCCCCCcccccc
Q 048430 463 FWSLKYILAVDFSLNSLSGSLPLNIGNLEALGGLNLTGNQLSGYIPSSIGNLKNLDWLALARNAFQ--GPIPQSFGSLIS 540 (973)
Q Consensus 463 ~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~--~~~p~~~~~l~~ 540 (973)
+..+++|+.|++++|++++..+..|..... -.....|+.|++++|.+. +..|..|..+++
T Consensus 260 l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~------------------~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~ 321 (332)
T 2ft3_A 260 LPDLKLLQVVYLHTNNITKVGVNDFCPVGF------------------GVKRAYYNGISLFNNPVPYWEVQPATFRCVTD 321 (332)
T ss_dssp GGGCTTCCEEECCSSCCCBCCTTSSSCSSC------------------CSSSCCBSEEECCSSSSCGGGSCGGGGTTBCC
T ss_pred hhcCccCCEEECCCCCCCccChhHcccccc------------------ccccccccceEeecCcccccccCcccccccch
Confidence 555555555555555554333333322100 001245666667766665 455666777777
Q ss_pred cccccccccc
Q 048430 541 LQSLDLSGNN 550 (973)
Q Consensus 541 L~~L~Ls~N~ 550 (973)
|+.|+|++|+
T Consensus 322 L~~l~l~~n~ 331 (332)
T 2ft3_A 322 RLAIQFGNYK 331 (332)
T ss_dssp STTEEC----
T ss_pred hhhhhccccc
Confidence 7777777664
No 296
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=2e-31 Score=295.10 Aligned_cols=231 Identities=20% Similarity=0.327 Sum_probs=136.9
Q ss_pred CCCcEEEecCCCCCCCCCcccccccCCcEEEccCCCCCCCCCccccCCCCCccEEEeeCcccCCCCCccccCCCCCCeEE
Q 048430 69 SFLVSLNISGNSFYDTLPNELWHMRRLKIIDFSSNSLSGSLPGDMCNSFTQLESFDVSSNKITGEFPSAIVNISSLKSIR 148 (973)
Q Consensus 69 ~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 148 (973)
+.|++|+|++|++.+..+..|+++++|++|+|++|++++..| ..+..+++|++|+|++|+++ .+|..+. ++|++|+
T Consensus 52 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~ 127 (330)
T 1xku_A 52 PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISP-GAFAPLVKLERLYLSKNQLK-ELPEKMP--KTLQELR 127 (330)
T ss_dssp TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCT-TTTTTCTTCCEEECCSSCCS-BCCSSCC--TTCCEEE
T ss_pred CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCH-HHhcCCCCCCEEECCCCcCC-ccChhhc--ccccEEE
Confidence 455666666666655444456666666666666666653223 23345555555555555555 3444332 4555555
Q ss_pred ccCccccccCCccccCCCCCccEEEcccccccccCCCCCCCccccCCCCccEEEecCCcccCccccccccCCcceeEEee
Q 048430 149 LDNNSLSGSFPTDLCTRLPSLVQLRLLGNNITGRIPNREIPNEIGNLHNLKILDLGGNNIAGLIPSMIFNNSNMVAILLY 228 (973)
Q Consensus 149 L~~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~l~ 228 (973)
+++|+++ .++...+..+++|++|++++|.++.. ...+..+.++++|++|++++|+++
T Consensus 128 l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~~~~~~l~~L~~L~l~~n~l~------------------- 184 (330)
T 1xku_A 128 VHENEIT-KVRKSVFNGLNQMIVVELGTNPLKSS---GIENGAFQGMKKLSYIRIADTNIT------------------- 184 (330)
T ss_dssp CCSSCCC-BBCHHHHTTCTTCCEEECCSSCCCGG---GBCTTGGGGCTTCCEEECCSSCCC-------------------
T ss_pred CCCCccc-ccCHhHhcCCccccEEECCCCcCCcc---CcChhhccCCCCcCEEECCCCccc-------------------
Confidence 5555555 44444444555555555555555311 012334444555555555555544
Q ss_pred cccccccCCCCCCccccceeeeccccccccCcchhcccCcccEEEeccccccccCCCcccccccceEEEccCCcCCCCCC
Q 048430 229 GNHLSGHLPSSIYLPNLENLFLWKNNLSGIIPDSICNASEATILELSSNLFSGLVPNTFGNCRQLQILSLGDNQLTTGSS 308 (973)
Q Consensus 229 ~n~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 308 (973)
.. |... .++|++|++++|++++..+..+..+++|+.|+|++|.+++..+..|..+++|++|++++|+++.++.
T Consensus 185 -----~l-~~~~-~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~ 257 (330)
T 1xku_A 185 -----TI-PQGL-PPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVKVPG 257 (330)
T ss_dssp -----SC-CSSC-CTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCSSCCT
T ss_pred -----cC-Cccc-cccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCccCCh
Confidence 22 1111 3678888888888888778888888888888888888888877778888888888888888775332
Q ss_pred CcchhhhhhhccCCcCcEEEccCCCCCCCCCCc
Q 048430 309 AQGQIFYSSLAKCRYLRVLVLDTNPLKGVIPNS 341 (973)
Q Consensus 309 ~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~ 341 (973)
.+..+++|++|++++|++++..+..
T Consensus 258 --------~l~~l~~L~~L~l~~N~i~~~~~~~ 282 (330)
T 1xku_A 258 --------GLADHKYIQVVYLHNNNISAIGSND 282 (330)
T ss_dssp --------TTTTCSSCCEEECCSSCCCCCCTTS
T ss_pred --------hhccCCCcCEEECCCCcCCccChhh
Confidence 3455566666666666666444433
No 297
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.98 E-value=8.1e-34 Score=315.21 Aligned_cols=245 Identities=13% Similarity=0.172 Sum_probs=185.2
Q ss_pred hcCCCCCccccccCceEEEEEEeCCCeEEEEEEEeccc--------hhhHHHHHHHHHHHHhcc---------CCceeEE
Q 048430 679 TNGFGESNLLGSGSFDNVYKATLANGVSVAVKVFNLQE--------DRALKSFDTECEVMRRIR---------HRNLIKI 741 (973)
Q Consensus 679 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--------~~~~~~~~~e~~~l~~l~---------h~niv~l 741 (973)
.++|...+.||+|+||.||+|+. +|+.||||+++... ....+.+.+|+.+++.++ ||||+++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 35677889999999999999998 68999999997552 223477899999999886 6666666
Q ss_pred Eeee-----------------ec-------------CCeeEEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHH
Q 048430 742 VSSC-----------------SN-------------PGFKALIMQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALE 791 (973)
Q Consensus 742 ~~~~-----------------~~-------------~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~ 791 (973)
.+++ .+ .+..++||||+++|++.+.+.. ..+++.+++.++.||+.||+
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~--~~~~~~~~~~i~~qi~~aL~ 175 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT--KLSSLATAKSILHQLTASLA 175 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT--TCCCHHHHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh--cCCCHHHHHHHHHHHHHHHH
Confidence 6543 22 6889999999999977666644 36899999999999999999
Q ss_pred HhhhcCCCCeEEccCCCCcEEeCCCC--------------------cEEEeecccccccCCCCCcccccccccccccCcc
Q 048430 792 YLHHGYSTPIIHCDLKPNNVLLDDDM--------------------VAHLGDFGIAKLLDGVDPVTQTMTLATIGYMAPE 851 (973)
Q Consensus 792 ~LH~~~~~~ivH~dlk~~Nill~~~~--------------------~~kl~Dfgla~~~~~~~~~~~~~~~~~~~y~aPE 851 (973)
|||+ +.+|+||||||+|||++.++ .+||+|||+|+.... ....||+.|+|||
T Consensus 176 ~lH~--~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~------~~~~gt~~y~aPE 247 (336)
T 2vuw_A 176 VAEA--SLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERD------GIVVFCDVSMDED 247 (336)
T ss_dssp HHHH--HHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEET------TEEECCCCTTCSG
T ss_pred HHHH--hCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCC------CcEEEeecccChh
Confidence 9993 37899999999999999887 899999999987642 2347999999999
Q ss_pred CCCCCCCCcchhHHHHHHH-HHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhcccccCCCCchhhhhhHHhHHHHH
Q 048430 852 YGSEGIVSISGDVYSFGIL-MMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLLSREDEEDADDFATKKTCI 930 (973)
Q Consensus 852 ~~~~~~~~~~sDvws~Gvv-l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~ 930 (973)
.+.+.. +.++||||+|++ .+++++|..||... .|..... ..+.+....... .....+..++
T Consensus 248 ~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~--------~~~~~~~----~~~~~~~~~~~~-----~~~~~~~~~s 309 (336)
T 2vuw_A 248 LFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNV--------LWLHYLT----DKMLKQMTFKTK-----CNTPAMKQIK 309 (336)
T ss_dssp GGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHH--------HHHHHHH----HHHHHTCCCSSC-----CCSHHHHHHH
T ss_pred hhcCCC-ccceehhhhhCCCCcccccccCCCcch--------hhhhHHH----HhhhhhhccCcc-----cchhhhhhcC
Confidence 887665 899999998777 77888899887321 1111100 000100000000 0112334678
Q ss_pred HHHHHHHHhccccCCCCCCCHHHHH-HH
Q 048430 931 SYIMSLALKCSAEIPEERINVKDAL-AD 957 (973)
Q Consensus 931 ~~l~~l~~~cl~~~P~~Rpt~~evl-~~ 957 (973)
+++.+++.+||+.| |++|++ +|
T Consensus 310 ~~~~dli~~~L~~d-----sa~e~l~~H 332 (336)
T 2vuw_A 310 RKIQEFHRTMLNFS-----SATDLLCQH 332 (336)
T ss_dssp HHHHHHHHHGGGSS-----SHHHHHHHC
T ss_pred HHHHHHHHHHhccC-----CHHHHHhcC
Confidence 88999999999976 999998 65
No 298
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.98 E-value=1.6e-35 Score=344.51 Aligned_cols=371 Identities=19% Similarity=0.152 Sum_probs=196.9
Q ss_pred cCCcEEEccCCCCCCCCCccccCCCCCccEEEeeCcccCC----CCCccccCCCCCCeEEccCccccccCCccccCCCC-
Q 048430 93 RRLKIIDFSSNSLSGSLPGDMCNSFTQLESFDVSSNKITG----EFPSAIVNISSLKSIRLDNNSLSGSFPTDLCTRLP- 167 (973)
Q Consensus 93 ~~L~~L~Ls~n~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~- 167 (973)
++|++|||++|+++......++..+++|++|+|++|.+++ .+|..+..+++|++|+|++|.+.+..+..++..++
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~ 82 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 82 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhh
Confidence 3455566665555422222334556666666666666653 34556667777777777777776444444444454
Q ss_pred ---CccEEEcccccccccCCCCCCCccccCCCCccEEEecCCcccCccccccccCCcceeEEeecccccccCCCCCCccc
Q 048430 168 ---SLVQLRLLGNNITGRIPNREIPNEIGNLHNLKILDLGGNNIAGLIPSMIFNNSNMVAILLYGNHLSGHLPSSIYLPN 244 (973)
Q Consensus 168 ---~L~~L~L~~N~l~~~~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~l~~ 244 (973)
+|++|+|++|+|+..- ...+|..+..+++|++|+|++|++++..+..+... + ....++
T Consensus 83 ~~~~L~~L~L~~n~i~~~~-~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~----------------l--~~~~~~ 143 (461)
T 1z7x_W 83 PSCKIQKLSLQNCCLTGAG-CGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEG----------------L--LDPQCR 143 (461)
T ss_dssp TTCCCCEEECTTSCCBGGG-HHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHH----------------H--TSTTCC
T ss_pred CCCceeEEEccCCCCCHHH-HHHHHHHHccCCceeEEECCCCcCchHHHHHHHHH----------------H--hcCCCc
Confidence 5777777777775210 01235667777778888888877764433333220 0 001346
Q ss_pred cceeeeccccccccC----cchhcccCcccEEEeccccccccCCCcccc-----cccceEEEccCCcCCCCCCCcchhhh
Q 048430 245 LENLFLWKNNLSGII----PDSICNASEATILELSSNLFSGLVPNTFGN-----CRQLQILSLGDNQLTTGSSAQGQIFY 315 (973)
Q Consensus 245 L~~L~L~~N~l~~~~----~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~-----l~~L~~L~L~~N~l~~~~~~~~~~~~ 315 (973)
|++|+|++|++++.. +..+..+++|++|++++|.+++..+..+.. .++|++|++++|.++... ...++
T Consensus 144 L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~---~~~l~ 220 (461)
T 1z7x_W 144 LEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDN---CRDLC 220 (461)
T ss_dssp CCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTH---HHHHH
T ss_pred ceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHH---HHHHH
Confidence 777777777776533 445556677777777777766543333322 346666666666665311 01123
Q ss_pred hhhccCCcCcEEEccCCCCCCCCCCcccccccccceeecccCCccccCCCCCCCCCcccEEEeecCccccccCcccCCCC
Q 048430 316 SSLAKCRYLRVLVLDTNPLKGVIPNSIGNLSTSLENFYAGSSQLSGGIPVGFGNLSNLLVLSLVNNELAGAIPTVLGKLQ 395 (973)
Q Consensus 316 ~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~ 395 (973)
..+..+++|+.|++++|++.+..... ..+..+..++
T Consensus 221 ~~l~~~~~L~~L~Ls~n~l~~~~~~~--------------------------------------------l~~~~~~~~~ 256 (461)
T 1z7x_W 221 GIVASKASLRELALGSNKLGDVGMAE--------------------------------------------LCPGLLHPSS 256 (461)
T ss_dssp HHHHHCTTCCEEECCSSBCHHHHHHH--------------------------------------------HHHHHTSTTC
T ss_pred HHHHhCCCccEEeccCCcCChHHHHH--------------------------------------------HHHHHhcCCC
Confidence 33444555555555555443211000 0011222344
Q ss_pred CCCEEEccCCcCCCC----CchhhhccCcCCeeecCCccccCcCcccccC-----cCCCCeeeccCCCCCCC----Cccc
Q 048430 396 KLQGLDLNSNKLKGF----IPTDLCKLEKLNTLLSNNNALQGQIPTCLAN-----LTSLRHLDFRSNSLNST----IPST 462 (973)
Q Consensus 396 ~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~-----l~~L~~L~L~~N~l~~~----~p~~ 462 (973)
+|++|+|++|+++.. ++..+..+++|+.|++++|.+++..+..+.. .++|++|++++|.+++. ++..
T Consensus 257 ~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~ 336 (461)
T 1z7x_W 257 RLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSV 336 (461)
T ss_dssp CCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHH
T ss_pred CceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHH
Confidence 455555555544432 2334444455555555555444333222221 24566666666665543 3344
Q ss_pred ccccccccEEEecCCcccCCcCcCccC-----CCCCCeEEccCCcCcc----cCCcccccCCcCCEEEcccCcccc
Q 048430 463 FWSLKYILAVDFSLNSLSGSLPLNIGN-----LEALGGLNLTGNQLSG----YIPSSIGNLKNLDWLALARNAFQG 529 (973)
Q Consensus 463 ~~~l~~L~~L~ls~N~l~~~~p~~~~~-----l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~ 529 (973)
+..+++|+.|++++|++++..+..+.. .++|+.|+|++|++++ .+|..+..+++|++|+|++|++++
T Consensus 337 l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~ 412 (461)
T 1z7x_W 337 LAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGD 412 (461)
T ss_dssp HHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCH
T ss_pred HhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCCH
Confidence 444555666666666555433333321 4566677777776664 556666666677777777776654
No 299
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.97 E-value=1.4e-35 Score=344.97 Aligned_cols=287 Identities=20% Similarity=0.183 Sum_probs=190.8
Q ss_pred ccceeeeccccccc----cCcchhcccCcccEEEeccccccccCCCccc-----ccccceEEEccCCcCCCCCCCcchhh
Q 048430 244 NLENLFLWKNNLSG----IIPDSICNASEATILELSSNLFSGLVPNTFG-----NCRQLQILSLGDNQLTTGSSAQGQIF 314 (973)
Q Consensus 244 ~L~~L~L~~N~l~~----~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~-----~l~~L~~L~L~~N~l~~~~~~~~~~~ 314 (973)
+|++|+|++|+++. .++..+..+++|++|+|++|.+++..+..+. ..++|++|++++|+++... ...+
T Consensus 86 ~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~---~~~l 162 (461)
T 1z7x_W 86 KIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAAS---CEPL 162 (461)
T ss_dssp CCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGG---HHHH
T ss_pred ceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHH---HHHH
Confidence 46666666666653 3355666666666666666666543333222 2446777777777765421 1223
Q ss_pred hhhhccCCcCcEEEccCCCCCCCCCCcccccccccceeecccCCccccCCCCC-CCCCcccEEEeecCccccc----cCc
Q 048430 315 YSSLAKCRYLRVLVLDTNPLKGVIPNSIGNLSTSLENFYAGSSQLSGGIPVGF-GNLSNLLVLSLVNNELAGA----IPT 389 (973)
Q Consensus 315 ~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~l~~l~l~~n~l~~~~p~~~-~~l~~L~~L~Ls~n~l~~~----~p~ 389 (973)
...+..+++|+.|++++|.+....+..+.. .+ ...++|++|++++|.+++. ++.
T Consensus 163 ~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~---------------------~l~~~~~~L~~L~L~~n~l~~~~~~~l~~ 221 (461)
T 1z7x_W 163 ASVLRAKPDFKELTVSNNDINEAGVRVLCQ---------------------GLKDSPCQLEALKLESCGVTSDNCRDLCG 221 (461)
T ss_dssp HHHHHHCTTCCEEECCSSBCHHHHHHHHHH---------------------HHHHSCCCCCEEECTTSCCBTTHHHHHHH
T ss_pred HHHHhhCCCCCEEECcCCCcchHHHHHHHH---------------------HHhcCCCCceEEEccCCCCcHHHHHHHHH
Confidence 455666777777777777765432222111 01 1245788888888888753 466
Q ss_pred ccCCCCCCCEEEccCCcCCCCC-----chhhhccCcCCeeecCCccccCc----CcccccCcCCCCeeeccCCCCCCCCc
Q 048430 390 VLGKLQKLQGLDLNSNKLKGFI-----PTDLCKLEKLNTLLSNNNALQGQ----IPTCLANLTSLRHLDFRSNSLNSTIP 460 (973)
Q Consensus 390 ~~~~l~~L~~L~Ls~N~l~~~~-----~~~~~~l~~L~~L~l~~N~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~~p 460 (973)
.+..+++|++|+|++|++++.. +..+..+++|+.|++++|.++.. ++..+.++++|++|++++|.+.+..+
T Consensus 222 ~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~ 301 (461)
T 1z7x_W 222 IVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGA 301 (461)
T ss_dssp HHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHH
T ss_pred HHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHH
Confidence 7777888888888888887532 22223578888888888888864 56667778888888888888865444
Q ss_pred cccccc-----ccccEEEecCCcccCC----cCcCccCCCCCCeEEccCCcCcccCCccccc-----CCcCCEEEcccCc
Q 048430 461 STFWSL-----KYILAVDFSLNSLSGS----LPLNIGNLEALGGLNLTGNQLSGYIPSSIGN-----LKNLDWLALARNA 526 (973)
Q Consensus 461 ~~~~~l-----~~L~~L~ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-----l~~L~~L~Ls~N~ 526 (973)
..+... ++|+.|++++|.+++. ++..+..+++|+.|+|++|++++..+..+.. .++|+.|+|++|+
T Consensus 302 ~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~ 381 (461)
T 1z7x_W 302 RLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCD 381 (461)
T ss_dssp HHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSC
T ss_pred HHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCC
Confidence 444432 5788888888888764 4555667788888888888887655554443 5688888888888
Q ss_pred ccc----CCCCCcccccccccccccccccCCC
Q 048430 527 FQG----PIPQSFGSLISLQSLDLSGNNISGE 554 (973)
Q Consensus 527 l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~ 554 (973)
+++ .+|..+..+++|++|+|++|++++.
T Consensus 382 i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~~ 413 (461)
T 1z7x_W 382 VSDSSCSSLAATLLANHSLRELDLSNNCLGDA 413 (461)
T ss_dssp CCHHHHHHHHHHHHHCCCCCEEECCSSSCCHH
T ss_pred CChhhHHHHHHHHHhCCCccEEECCCCCCCHH
Confidence 875 6777777788888888888888754
No 300
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.96 E-value=1.9e-29 Score=281.97 Aligned_cols=285 Identities=20% Similarity=0.245 Sum_probs=188.7
Q ss_pred CCCCCcceEEEEEeeCCCCcEEEEecCCCCCCCcCCCCCCCCCCCcEEEecCCCCCCCCCcccccccCCcEEEccCCCCC
Q 048430 27 NTSASVCNWVGVTCSIRHGRVAALSLPNLSLGGTLPPHVGNLSFLVSLNISGNSFYDTLPNELWHMRRLKIIDFSSNSLS 106 (973)
Q Consensus 27 ~~~~~~c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~ 106 (973)
+....+|.|.|+ |+. ++++++ .+|..+. ++|++|+|++|++.+..+..+.++++|++|+|++|+++
T Consensus 24 ~~~~~~C~~~~~-c~~----------~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~ 89 (353)
T 2z80_A 24 NQASLSCDRNGI-CKG----------SSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGIN 89 (353)
T ss_dssp ---CCEECTTSE-EEC----------CSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCC
T ss_pred CccCCCCCCCeE-eeC----------CCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccC
Confidence 345677999998 854 344444 5565443 46777777777776555556777777777777777777
Q ss_pred CCCCccccCCCCCccEEEeeCcccCCCCCccccCCCCCCeEEccCccccccCCc-cccCCCCCccEEEccccc-ccccCC
Q 048430 107 GSLPGDMCNSFTQLESFDVSSNKITGEFPSAIVNISSLKSIRLDNNSLSGSFPT-DLCTRLPSLVQLRLLGNN-ITGRIP 184 (973)
Q Consensus 107 ~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~-~~~~~l~~L~~L~L~~N~-l~~~~~ 184 (973)
.++...|..+++|++|+|++|++++..+..|+++++|++|+|++|+++ .+|. ..+..+++|++|++++|+ +++
T Consensus 90 -~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~~l~~L~~L~l~~n~~~~~--- 164 (353)
T 2z80_A 90 -TIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQILRVGNMDTFTK--- 164 (353)
T ss_dssp -EECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCS-SSCSSCSCTTCTTCCEEEEEESSSCCE---
T ss_pred -ccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCc-ccCchhhhccCCCCcEEECCCCccccc---
Confidence 344444567777777777777777544444777777777777777777 6665 566777777777777774 442
Q ss_pred CCCCCccccCCCCccEEEecCCcccCccccccccCCcceeEEeecccccccCCCCC-CccccceeeeccccccccCcchh
Q 048430 185 NREIPNEIGNLHNLKILDLGGNNIAGLIPSMIFNNSNMVAILLYGNHLSGHLPSSI-YLPNLENLFLWKNNLSGIIPDSI 263 (973)
Q Consensus 185 ~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~-~l~~L~~L~L~~N~l~~~~~~~l 263 (973)
..|..|+++++|++|++++|++++..|..+..+++|+.|++++|.+....+... .+++|++|++++|++++..+..+
T Consensus 165 --~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l 242 (353)
T 2z80_A 165 --IQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSEL 242 (353)
T ss_dssp --ECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC--
T ss_pred --cCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCcccccccccc
Confidence 124567777777777777777777777777777777777777777754333222 26777777777777776554433
Q ss_pred c---ccCcccEEEeccccccc----cCCCcccccccceEEEccCCcCCCCCCCcchhhhhhhccCCcCcEEEccCCCCCC
Q 048430 264 C---NASEATILELSSNLFSG----LVPNTFGNCRQLQILSLGDNQLTTGSSAQGQIFYSSLAKCRYLRVLVLDTNPLKG 336 (973)
Q Consensus 264 ~---~l~~L~~L~L~~N~i~~----~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~ 336 (973)
. ....++.++|++|.+++ .+|..+..+++|++|++++|+++.++.. .+..+++|+.|++++|++.+
T Consensus 243 ~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~-------~~~~l~~L~~L~L~~N~~~~ 315 (353)
T 2z80_A 243 STGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKSVPDG-------IFDRLTSLQKIWLHTNPWDC 315 (353)
T ss_dssp ----CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTT-------TTTTCTTCCEEECCSSCBCC
T ss_pred ccccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCccCHH-------HHhcCCCCCEEEeeCCCccC
Confidence 3 34556777777777664 2455667777777778877777754432 24667777788888887776
Q ss_pred CCC
Q 048430 337 VIP 339 (973)
Q Consensus 337 ~~p 339 (973)
..|
T Consensus 316 ~~~ 318 (353)
T 2z80_A 316 SCP 318 (353)
T ss_dssp CHH
T ss_pred cCC
Confidence 543
No 301
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.96 E-value=1.4e-31 Score=321.64 Aligned_cols=433 Identities=13% Similarity=0.023 Sum_probs=252.6
Q ss_pred CCCcccccccCCcEEEccCCCC---CCCCCcccc-----------CCCCCccEEEeeCcccCCCCCccccCC--CCCCeE
Q 048430 84 TLPNELWHMRRLKIIDFSSNSL---SGSLPGDMC-----------NSFTQLESFDVSSNKITGEFPSAIVNI--SSLKSI 147 (973)
Q Consensus 84 ~~p~~~~~l~~L~~L~Ls~n~l---~~~~p~~~~-----------~~l~~L~~L~Ls~N~l~~~~p~~~~~l--~~L~~L 147 (973)
..+..+..+++|++|+|+++.. .+.+|.... ..+++|++|+|++|.+++..+..+... .+|++|
T Consensus 64 ~~~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L 143 (592)
T 3ogk_B 64 TPDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFRRMIVSDLDLDRLAKARADDLETL 143 (592)
T ss_dssp CHHHHHHHCTTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEE
T ss_pred ChHHHHHhCCCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCCCeEEeeccEecHHHHHHHHHhccccCcEE
Confidence 3445567888999999988543 134443221 156777777777777766555555543 337777
Q ss_pred EccCcc-ccccCCccccCCCCCccEEEcccccccccCCCCCCCccccCCCCccEEEecCCcccC----ccccccccCCcc
Q 048430 148 RLDNNS-LSGSFPTDLCTRLPSLVQLRLLGNNITGRIPNREIPNEIGNLHNLKILDLGGNNIAG----LIPSMIFNNSNM 222 (973)
Q Consensus 148 ~L~~N~-l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~p~~l~~l~~L~~L~L~~N~l~~----~~~~~~~~~~~L 222 (973)
+|++|. ++..--..+...+++|++|+|++|.+++.-. ..++..+..+++|++|+|++|.+++ .++..+.+
T Consensus 144 ~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~-~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~---- 218 (592)
T 3ogk_B 144 KLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDG-KWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARN---- 218 (592)
T ss_dssp EEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCS-HHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHH----
T ss_pred ECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcch-hHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhh----
Confidence 777765 2110011122356667777777776653210 0022334556666666666666652 22222333
Q ss_pred eeEEeecccccccCCCCCCccccceeeeccccccccCcchhcccCcccEEEecccccc---ccCCCcccccccceEEEcc
Q 048430 223 VAILLYGNHLSGHLPSSIYLPNLENLFLWKNNLSGIIPDSICNASEATILELSSNLFS---GLVPNTFGNCRQLQILSLG 299 (973)
Q Consensus 223 ~~L~l~~n~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~i~---~~~~~~~~~l~~L~~L~L~ 299 (973)
+++|++|++++|.+.+ ++..+..+++|+.|+++++... ...+..+..+++|+.|+++
T Consensus 219 -------------------~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~ 278 (592)
T 3ogk_B 219 -------------------CRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLS 278 (592)
T ss_dssp -------------------CTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEET
T ss_pred -------------------CCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccccCcc
Confidence 4566666666666664 4556666666666666643222 2223445566666666666
Q ss_pred CCcCCCCCCCcchhhhhhhccCCcCcEEEccCCCCCCCCCCcccccccccceeecccCCccccCCCCCCCCCcccEEEee
Q 048430 300 DNQLTTGSSAQGQIFYSSLAKCRYLRVLVLDTNPLKGVIPNSIGNLSTSLENFYAGSSQLSGGIPVGFGNLSNLLVLSLV 379 (973)
Q Consensus 300 ~N~l~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls 379 (973)
++.... .+..+..+++|+.|++++|.+.+... +..+..+++|++|+++
T Consensus 279 ~~~~~~--------l~~~~~~~~~L~~L~Ls~~~l~~~~~------------------------~~~~~~~~~L~~L~L~ 326 (592)
T 3ogk_B 279 YMGPNE--------MPILFPFAAQIRKLDLLYALLETEDH------------------------CTLIQKCPNLEVLETR 326 (592)
T ss_dssp TCCTTT--------GGGGGGGGGGCCEEEETTCCCCHHHH------------------------HHHHTTCTTCCEEEEE
T ss_pred ccchhH--------HHHHHhhcCCCcEEecCCCcCCHHHH------------------------HHHHHhCcCCCEEecc
Confidence 543221 23345556666666666666442211 1113556777777777
Q ss_pred cCccccccCcccCCCCCCCEEEccC-----------CcCCCCC-chhhhccCcCCeeecCCccccCcCcccccC-cCCCC
Q 048430 380 NNELAGAIPTVLGKLQKLQGLDLNS-----------NKLKGFI-PTDLCKLEKLNTLLSNNNALQGQIPTCLAN-LTSLR 446 (973)
Q Consensus 380 ~n~l~~~~p~~~~~l~~L~~L~Ls~-----------N~l~~~~-~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~-l~~L~ 446 (973)
++-..+.++..+..+++|++|+|++ |.+++.. +..+..+++|+.|+++.|.+++..+..++. +++|+
T Consensus 327 ~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~ 406 (592)
T 3ogk_B 327 NVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLC 406 (592)
T ss_dssp GGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCC
T ss_pred CccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCc
Confidence 3332333444445677777777773 4555332 222345777888877777777666666654 77788
Q ss_pred eeecc----CCCCCCC-----CcccccccccccEEEecCCc--ccCCcCcCcc-CCCCCCeEEccCCcCcc-cCCccccc
Q 048430 447 HLDFR----SNSLNST-----IPSTFWSLKYILAVDFSLNS--LSGSLPLNIG-NLEALGGLNLTGNQLSG-YIPSSIGN 513 (973)
Q Consensus 447 ~L~L~----~N~l~~~-----~p~~~~~l~~L~~L~ls~N~--l~~~~p~~~~-~l~~L~~L~Ls~N~l~~-~~p~~~~~ 513 (973)
.|+++ .|.+++. ++..+.++++|+.|+++++. +++..+..+. .+++|+.|+|++|++++ .++..+..
T Consensus 407 ~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~ 486 (592)
T 3ogk_B 407 DFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRG 486 (592)
T ss_dssp EEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTC
T ss_pred EEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhc
Confidence 88885 6666653 33446667788888886433 5544444443 36778888888888875 34555677
Q ss_pred CCcCCEEEcccCccccC-CCCCcccccccccccccccccCCCCCcccc-ccccccccccCCC
Q 048430 514 LKNLDWLALARNAFQGP-IPQSFGSLISLQSLDLSGNNISGEIPKSLE-KLSRLVDFNVSFN 573 (973)
Q Consensus 514 l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~l~ls~N 573 (973)
+++|+.|+|++|.+++. ++..+..+++|++|+|++|+++..-...+. .++.+....+..+
T Consensus 487 ~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~~~~~~l~~~~p~l~~~~~~~~ 548 (592)
T 3ogk_B 487 CPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMTGQDLMQMARPYWNIELIPSR 548 (592)
T ss_dssp CTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCTTCTTGGGGCCTTEEEEEECCC
T ss_pred CcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCHHHHHHHHHhCCCcEEEEecCc
Confidence 78888888888887644 344446678888888888888765333332 4555555444443
No 302
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.96 E-value=2e-31 Score=320.45 Aligned_cols=463 Identities=14% Similarity=0.117 Sum_probs=264.7
Q ss_pred CcceEEEEEeeCCCCcEEEEecCCCCCCCcCCCCCCCCCCCcEEEecCCCC---CCCCCcccc------------cccCC
Q 048430 31 SVCNWVGVTCSIRHGRVAALSLPNLSLGGTLPPHVGNLSFLVSLNISGNSF---YDTLPNELW------------HMRRL 95 (973)
Q Consensus 31 ~~c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~---~~~~p~~~~------------~l~~L 95 (973)
-|++|.++.+... + .+.+.. ......+..+..+++|++|+|+++.. .+.+|..++ .+++|
T Consensus 40 vck~W~~~~~~~~--~--~l~~~~-~~~~~~~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L 114 (592)
T 3ogk_B 40 VCRRWFKIDSETR--E--HVTMAL-CYTATPDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQL 114 (592)
T ss_dssp SCHHHHHHHHHHC--C--EEEESC-GGGSCHHHHHHHCTTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTC
T ss_pred HhHHHHHhhhccc--c--EEEEee-ccccChHHHHHhCCCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCC
Confidence 4458999965321 1 222222 12223334456788999999988532 255555444 78999
Q ss_pred cEEEccCCCCCCCCCccccCCCCC-ccEEEeeCcc-cCC-CCCccccCCCCCCeEEccCccccccCC---ccccCCCCCc
Q 048430 96 KIIDFSSNSLSGSLPGDMCNSFTQ-LESFDVSSNK-ITG-EFPSAIVNISSLKSIRLDNNSLSGSFP---TDLCTRLPSL 169 (973)
Q Consensus 96 ~~L~Ls~n~l~~~~p~~~~~~l~~-L~~L~Ls~N~-l~~-~~p~~~~~l~~L~~L~L~~N~l~~~ip---~~~~~~l~~L 169 (973)
++|+|++|.+++..+..+...++. |++|+|++|. ++. .++..+.++++|++|+|++|.+++.-. ..+...+++|
T Consensus 115 ~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L 194 (592)
T 3ogk_B 115 KSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSL 194 (592)
T ss_dssp CEEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCC
T ss_pred CeEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCc
Confidence 999999998875544444332445 9999999987 221 122334578999999999999874421 1234578999
Q ss_pred cEEEcccccccccCCCCCCCccccCCCCccEEEecCCcccCccccccccCCcceeEEeecccccc---c-CCCCCCcccc
Q 048430 170 VQLRLLGNNITGRIPNREIPNEIGNLHNLKILDLGGNNIAGLIPSMIFNNSNMVAILLYGNHLSG---H-LPSSIYLPNL 245 (973)
Q Consensus 170 ~~L~L~~N~l~~~~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~l~~n~l~~---~-~~~~~~l~~L 245 (973)
++|+|++|.+++.. ...++..+.++++|++|+|++|.+.+ +|..+..+++|+.|+++...... . ......+++|
T Consensus 195 ~~L~L~~n~~~~~~-~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L 272 (592)
T 3ogk_B 195 EVLNFYMTEFAKIS-PKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKL 272 (592)
T ss_dssp CEEECTTCCCSSCC-HHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTC
T ss_pred cEEEeeccCCCccC-HHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhccccc
Confidence 99999999996321 12345567789999999999999986 67888888888888887533221 1 1122235666
Q ss_pred ceeeeccccccccCcchhcccCcccEEEeccccccccCC-CcccccccceEEEccCCcCCCCCCCcchhhhhhhccCCcC
Q 048430 246 ENLFLWKNNLSGIIPDSICNASEATILELSSNLFSGLVP-NTFGNCRQLQILSLGDNQLTTGSSAQGQIFYSSLAKCRYL 324 (973)
Q Consensus 246 ~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~L 324 (973)
+.|+++++... .+|..+..+++|++|+|++|.+++... ..+..+++|++|+++ |.+.. .........+++|
T Consensus 273 ~~L~l~~~~~~-~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~-~~~~~------~~l~~~~~~~~~L 344 (592)
T 3ogk_B 273 CRLGLSYMGPN-EMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETR-NVIGD------RGLEVLAQYCKQL 344 (592)
T ss_dssp CEEEETTCCTT-TGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEE-GGGHH------HHHHHHHHHCTTC
T ss_pred cccCccccchh-HHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEecc-CccCH------HHHHHHHHhCCCC
Confidence 66666664333 445555666666666666666543322 224555666666665 33221 1111222344455
Q ss_pred cEEEccC---CCCCCCCCCcccccccccceeecccCCccccCCCCCCCCCcccEEEeecCccccc-cCcccCCCCCCCEE
Q 048430 325 RVLVLDT---NPLKGVIPNSIGNLSTSLENFYAGSSQLSGGIPVGFGNLSNLLVLSLVNNELAGA-IPTVLGKLQKLQGL 400 (973)
Q Consensus 325 ~~L~L~~---N~l~~~~p~~~~~l~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~-~p~~~~~l~~L~~L 400 (973)
++|++++ ++.... . .|.+++. ++..+..+++|++|
T Consensus 345 ~~L~L~~g~~~~~~~~-----------------~------------------------~~~~~~~~~~~l~~~~~~L~~L 383 (592)
T 3ogk_B 345 KRLRIERGADEQGMED-----------------E------------------------EGLVSQRGLIALAQGCQELEYM 383 (592)
T ss_dssp CEEEEECCCCSSTTSS-----------------T------------------------TCCCCHHHHHHHHHHCTTCSEE
T ss_pred CEEEeecCcccccccc-----------------c------------------------cCccCHHHHHHHHhhCccCeEE
Confidence 5555541 000000 0 1233221 11112334455555
Q ss_pred EccCCcCCCCCchhhhc-cCcCCeeecC----CccccCc-----CcccccCcCCCCeeeccCCC--CCCCCcccccc-cc
Q 048430 401 DLNSNKLKGFIPTDLCK-LEKLNTLLSN----NNALQGQ-----IPTCLANLTSLRHLDFRSNS--LNSTIPSTFWS-LK 467 (973)
Q Consensus 401 ~Ls~N~l~~~~~~~~~~-l~~L~~L~l~----~N~l~~~-----~~~~~~~l~~L~~L~L~~N~--l~~~~p~~~~~-l~ 467 (973)
+++.|++++..+..+.. +++|+.|+++ .|.+++. ++..+.++++|++|++++|. +++..+..+.. ++
T Consensus 384 ~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~ 463 (592)
T 3ogk_B 384 AVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSP 463 (592)
T ss_dssp EEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCT
T ss_pred EeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCc
Confidence 55555554443444433 4555555553 4444432 22234455666666665432 44333333332 56
Q ss_pred cccEEEecCCcccC-CcCcCccCCCCCCeEEccCCcCccc-CCcccccCCcCCEEEcccCccccCCCCCc-ccccccccc
Q 048430 468 YILAVDFSLNSLSG-SLPLNIGNLEALGGLNLTGNQLSGY-IPSSIGNLKNLDWLALARNAFQGPIPQSF-GSLISLQSL 544 (973)
Q Consensus 468 ~L~~L~ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L 544 (973)
+|+.|++++|++++ .++..+.++++|+.|+|++|.+++. ++..+..+++|+.|+|++|++++.....+ ..++.+...
T Consensus 464 ~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~~~~~~l~~~~p~l~~~ 543 (592)
T 3ogk_B 464 NVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMTGQDLMQMARPYWNIE 543 (592)
T ss_dssp TCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCTTCTTGGGGCCTTEEEE
T ss_pred cceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCHHHHHHHHHhCCCcEEE
Confidence 66667777666654 2344456677888888888887644 34445567888888888888775433333 234555555
Q ss_pred ccccc
Q 048430 545 DLSGN 549 (973)
Q Consensus 545 ~Ls~N 549 (973)
.+..+
T Consensus 544 ~~~~~ 548 (592)
T 3ogk_B 544 LIPSR 548 (592)
T ss_dssp EECCC
T ss_pred EecCc
Confidence 44443
No 303
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.96 E-value=1.8e-28 Score=274.00 Aligned_cols=276 Identities=21% Similarity=0.250 Sum_probs=135.2
Q ss_pred cCCcEEEccCCCCCCCCCccccCCCCCccEEEeeCcccCCCCCccccCCCCCCeEEccCccccccCCccccCCCCCccEE
Q 048430 93 RRLKIIDFSSNSLSGSLPGDMCNSFTQLESFDVSSNKITGEFPSAIVNISSLKSIRLDNNSLSGSFPTDLCTRLPSLVQL 172 (973)
Q Consensus 93 ~~L~~L~Ls~n~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L 172 (973)
+.....|+++|.++ .+|.++. ++|++|++++|++++..+..|.++++|++|+|++|+++ .++...|..+++|++|
T Consensus 31 ~~~~~c~~~~~~l~-~iP~~~~---~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L 105 (353)
T 2z80_A 31 DRNGICKGSSGSLN-SIPSGLT---EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGIN-TIEEDSFSSLGSLEHL 105 (353)
T ss_dssp CTTSEEECCSTTCS-SCCTTCC---TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCC-EECTTTTTTCTTCCEE
T ss_pred CCCeEeeCCCCCcc-ccccccc---ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccC-ccCHhhcCCCCCCCEE
Confidence 33344555555555 4554432 35555555555555443345555555555555555555 3333344455555555
Q ss_pred EcccccccccCCCCCCCcc-ccCCCCccEEEecCCcccCccc-cccccCCcceeEEeecccccccCCCCCCccccceeee
Q 048430 173 RLLGNNITGRIPNREIPNE-IGNLHNLKILDLGGNNIAGLIP-SMIFNNSNMVAILLYGNHLSGHLPSSIYLPNLENLFL 250 (973)
Q Consensus 173 ~L~~N~l~~~~~~~~~p~~-l~~l~~L~~L~L~~N~l~~~~~-~~~~~~~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L 250 (973)
+|++|+|+ .+|.. |+++++|++|+|++|++++..+ ..+.. +++|++|++
T Consensus 106 ~Ls~n~l~------~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~-----------------------l~~L~~L~l 156 (353)
T 2z80_A 106 DLSYNYLS------NLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSH-----------------------LTKLQILRV 156 (353)
T ss_dssp ECCSSCCS------SCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTT-----------------------CTTCCEEEE
T ss_pred ECCCCcCC------cCCHhHhCCCccCCEEECCCCCCcccCchhhhcc-----------------------CCCCcEEEC
Confidence 55555554 22332 5555556666666555553322 23333 444555555
Q ss_pred ccc-cccccCcchhcccCcccEEEeccccccccCCCcccccccceEEEccCCcCCCCCCCcchhhhhhhccCCcCcEEEc
Q 048430 251 WKN-NLSGIIPDSICNASEATILELSSNLFSGLVPNTFGNCRQLQILSLGDNQLTTGSSAQGQIFYSSLAKCRYLRVLVL 329 (973)
Q Consensus 251 ~~N-~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~L~~L~L 329 (973)
++| .+.++.+..+..+++|++|++++|.+++..|..|..+++|++|++++|+++.. ....+..+++|+.|++
T Consensus 157 ~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~-------~~~~~~~~~~L~~L~L 229 (353)
T 2z80_A 157 GNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILL-------LEIFVDVTSSVECLEL 229 (353)
T ss_dssp EESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTH-------HHHHHHHTTTEEEEEE
T ss_pred CCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccc-------hhhhhhhcccccEEEC
Confidence 554 24444445555555555555555555555555566666666666666655431 1122334555566666
Q ss_pred cCCCCCCCCCCcccccccccceeecccCCccccCCCCCCCCCcccEEEeecCcccc----ccCcccCCCCCCCEEEccCC
Q 048430 330 DTNPLKGVIPNSIGNLSTSLENFYAGSSQLSGGIPVGFGNLSNLLVLSLVNNELAG----AIPTVLGKLQKLQGLDLNSN 405 (973)
Q Consensus 330 ~~N~l~~~~p~~~~~l~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~----~~p~~~~~l~~L~~L~Ls~N 405 (973)
++|.+++..+..+.. ......++.++++++.+.+ .+|..+..+++|++|+|++|
T Consensus 230 ~~n~l~~~~~~~l~~----------------------~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N 287 (353)
T 2z80_A 230 RDTDLDTFHFSELST----------------------GETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRN 287 (353)
T ss_dssp ESCBCTTCCCC----------------------------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSS
T ss_pred CCCcccccccccccc----------------------ccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCC
Confidence 666555443322211 1223445555665555543 23444555555555555555
Q ss_pred cCCCCCchh-hhccCcCCeeecCCcccc
Q 048430 406 KLKGFIPTD-LCKLEKLNTLLSNNNALQ 432 (973)
Q Consensus 406 ~l~~~~~~~-~~~l~~L~~L~l~~N~l~ 432 (973)
+++. +|.. |..+++|+.|++++|.+.
T Consensus 288 ~l~~-i~~~~~~~l~~L~~L~L~~N~~~ 314 (353)
T 2z80_A 288 QLKS-VPDGIFDRLTSLQKIWLHTNPWD 314 (353)
T ss_dssp CCCC-CCTTTTTTCTTCCEEECCSSCBC
T ss_pred CCCc-cCHHHHhcCCCCCEEEeeCCCcc
Confidence 5552 2322 244444444444444444
No 304
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.96 E-value=6.1e-29 Score=294.41 Aligned_cols=285 Identities=26% Similarity=0.295 Sum_probs=184.3
Q ss_pred CCCcceEEEEEee------CCCCcEEEEecCCCCCCCcCCCCCCCCCCCcEEEecCCCCCCCCCcccccccCCcEEEccC
Q 048430 29 SASVCNWVGVTCS------IRHGRVAALSLPNLSLGGTLPPHVGNLSFLVSLNISGNSFYDTLPNELWHMRRLKIIDFSS 102 (973)
Q Consensus 29 ~~~~c~w~gv~C~------~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~ 102 (973)
+.+||.|+|..|. .....++.|++++++++ .+|..+. ++|++|+|++|++. .+|. .+++|++|+|++
T Consensus 18 ~~~~~~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~ 90 (622)
T 3g06_A 18 AAPAEESRGRAAVVQKMRACLNNGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSG 90 (622)
T ss_dssp TCCGGGHHHHHHHHHHHHHHHHHCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTCCEEEECS
T ss_pred cCCcchhccccccCcccccccCCCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCC
Confidence 5789999775332 12345888899988888 8887776 78888888888885 5665 567888888888
Q ss_pred CCCCCCCCccccCCCCCccEEEeeCcccCCCCCccccCCCCCCeEEccCccccccCCccccCCCCCccEEEccccccccc
Q 048430 103 NSLSGSLPGDMCNSFTQLESFDVSSNKITGEFPSAIVNISSLKSIRLDNNSLSGSFPTDLCTRLPSLVQLRLLGNNITGR 182 (973)
Q Consensus 103 n~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~ 182 (973)
|+++ .+|. .+++|++|+|++|++++ +|. .+++|+.|++++|+|+ .+|.. +++|++|+|++|+|++
T Consensus 91 N~l~-~lp~----~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L~~N~l~-~lp~~----l~~L~~L~Ls~N~l~~- 155 (622)
T 3g06_A 91 NQLT-SLPV----LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWIFGNQLT-SLPVL----PPGLQELSVSDNQLAS- 155 (622)
T ss_dssp CCCS-CCCC----CCTTCCEEEECSCCCCC-CCC---CCTTCCEEECCSSCCS-CCCCC----CTTCCEEECCSSCCSC-
T ss_pred CcCC-cCCC----CCCCCCEEECcCCcCCC-CCC---CCCCcCEEECCCCCCC-cCCCC----CCCCCEEECcCCcCCC-
Confidence 8887 6775 56888888888888884 554 4677888888888887 56642 4777777777777763
Q ss_pred CCCCCCCccccCCCCccEEEecCCcccCccccccccCCcceeEEeecccccccCCCCCCccccceeeeccccccccCcch
Q 048430 183 IPNREIPNEIGNLHNLKILDLGGNNIAGLIPSMIFNNSNMVAILLYGNHLSGHLPSSIYLPNLENLFLWKNNLSGIIPDS 262 (973)
Q Consensus 183 ~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 262 (973)
+|. .+++|+.|++++|+|++. | . .+++|+.|++++|++++ +|..
T Consensus 156 -----l~~---~~~~L~~L~L~~N~l~~l-~---~-----------------------~~~~L~~L~Ls~N~l~~-l~~~ 199 (622)
T 3g06_A 156 -----LPA---LPSELCKLWAYNNQLTSL-P---M-----------------------LPSGLQELSVSDNQLAS-LPTL 199 (622)
T ss_dssp -----CCC---CCTTCCEEECCSSCCSCC-C---C-----------------------CCTTCCEEECCSSCCSC-CCCC
T ss_pred -----cCC---ccCCCCEEECCCCCCCCC-c---c-----------------------cCCCCcEEECCCCCCCC-CCCc
Confidence 332 235677777777777642 3 1 14667777777777764 3322
Q ss_pred hcccCcccEEEeccccccccCCCcccccccceEEEccCCcCCCCCCCcchhhhhhhccCCcCcEEEccCCCCCCCCCCcc
Q 048430 263 ICNASEATILELSSNLFSGLVPNTFGNCRQLQILSLGDNQLTTGSSAQGQIFYSSLAKCRYLRVLVLDTNPLKGVIPNSI 342 (973)
Q Consensus 263 l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~ 342 (973)
+++|+.|++++|.++.+.. .+++|+.|++++|+|+.++
T Consensus 200 ---~~~L~~L~L~~N~l~~l~~----~~~~L~~L~Ls~N~L~~lp----------------------------------- 237 (622)
T 3g06_A 200 ---PSELYKLWAYNNRLTSLPA----LPSGLKELIVSGNRLTSLP----------------------------------- 237 (622)
T ss_dssp ---CTTCCEEECCSSCCSSCCC----CCTTCCEEECCSSCCSCCC-----------------------------------
T ss_pred ---cchhhEEECcCCcccccCC----CCCCCCEEEccCCccCcCC-----------------------------------
Confidence 3566667777776664432 2355666666666555322
Q ss_pred cccccccceeecccCCccccCCCCCCCCCcccEEEeecCccccccCcccCCCCCCCEEEccCCcCCCCCchhhhccCcCC
Q 048430 343 GNLSTSLENFYAGSSQLSGGIPVGFGNLSNLLVLSLVNNELAGAIPTVLGKLQKLQGLDLNSNKLKGFIPTDLCKLEKLN 422 (973)
Q Consensus 343 ~~l~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 422 (973)
..+++|+.|++++|.++ .+|. .+++|+.|+|++|+|+ .+|..+.++++|+
T Consensus 238 -------------------------~~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~ 287 (622)
T 3g06_A 238 -------------------------VLPSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSET 287 (622)
T ss_dssp -------------------------CCCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTC
T ss_pred -------------------------CCCCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHHhhccccC
Confidence 11234555555555555 2333 3455666666666666 4555666666666
Q ss_pred eeecCCccccCcCcccccCcC
Q 048430 423 TLLSNNNALQGQIPTCLANLT 443 (973)
Q Consensus 423 ~L~l~~N~l~~~~~~~~~~l~ 443 (973)
.|++++|.+++..|..+..++
T Consensus 288 ~L~L~~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 288 TVNLEGNPLSERTLQALREIT 308 (622)
T ss_dssp EEECCSCCCCHHHHHHHHHHH
T ss_pred EEEecCCCCCCcCHHHHHhcc
Confidence 666666666666665555444
No 305
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=6.5e-29 Score=271.81 Aligned_cols=278 Identities=24% Similarity=0.254 Sum_probs=174.2
Q ss_pred ceeeeccccccccCcchhcccCcccEEEeccccccccCCCcccccccceEEEccCCcCCCCCCCcchhhhhhhccCCcCc
Q 048430 246 ENLFLWKNNLSGIIPDSICNASEATILELSSNLFSGLVPNTFGNCRQLQILSLGDNQLTTGSSAQGQIFYSSLAKCRYLR 325 (973)
Q Consensus 246 ~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~L~ 325 (973)
+.++++++.++. +|..+. ++|++|+|++|+++.+++..|.++++|++|++++|+++.... .+..
T Consensus 10 ~~l~c~~~~l~~-ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~-----~~~~-------- 73 (306)
T 2z66_A 10 TEIRCNSKGLTS-VPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGC-----CSQS-------- 73 (306)
T ss_dssp TEEECCSSCCSS-CCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEE-----EEHH--------
T ss_pred CEEEcCCCCccc-CCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccC-----cccc--------
Confidence 456666666663 343332 567777777777776666667777777777777776653100 0111
Q ss_pred EEEccCCCCCCCCCCcccccccccceeecccCCccccCCCCCCCCCcccEEEeecCccccccCcccCCCCCCCEEEccCC
Q 048430 326 VLVLDTNPLKGVIPNSIGNLSTSLENFYAGSSQLSGGIPVGFGNLSNLLVLSLVNNELAGAIPTVLGKLQKLQGLDLNSN 405 (973)
Q Consensus 326 ~L~L~~N~l~~~~p~~~~~l~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N 405 (973)
+..+++|++|++++|.+. .+|..+..+++|++|++++|
T Consensus 74 -----------------------------------------~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n 111 (306)
T 2z66_A 74 -----------------------------------------DFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHS 111 (306)
T ss_dssp -----------------------------------------HHSCSCCCEEECCSCSEE-EEEEEEETCTTCCEEECTTS
T ss_pred -----------------------------------------cccccccCEEECCCCccc-cChhhcCCCCCCCEEECCCC
Confidence 223445555555555555 34444555566666666666
Q ss_pred cCCCCCc-hhhhccCcCCeeecCCccccCcCcccccCcCCCCeeeccCCCCCC-CCcccccccccccEEEecCCcccCCc
Q 048430 406 KLKGFIP-TDLCKLEKLNTLLSNNNALQGQIPTCLANLTSLRHLDFRSNSLNS-TIPSTFWSLKYILAVDFSLNSLSGSL 483 (973)
Q Consensus 406 ~l~~~~~-~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~ls~N~l~~~~ 483 (973)
++++..+ ..+..+++|+.|++++|.+.+..+..+..+++|++|++++|.+++ ..|..+..+++|+.|++++|++++..
T Consensus 112 ~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~ 191 (306)
T 2z66_A 112 NLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLS 191 (306)
T ss_dssp EEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEEC
T ss_pred cccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcC
Confidence 6554433 355556666666666666665556666666666666666666654 45666666667777777777776666
Q ss_pred CcCccCCCCCCeEEccCCcCcccCCcccccCCcCCEEEcccCccccCCCCCccccc-ccccccccccccCCCCC--cccc
Q 048430 484 PLNIGNLEALGGLNLTGNQLSGYIPSSIGNLKNLDWLALARNAFQGPIPQSFGSLI-SLQSLDLSGNNISGEIP--KSLE 560 (973)
Q Consensus 484 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p--~~~~ 560 (973)
|..+..+++|+.|+|++|++++..+..+..+++|+.|+|++|++++..|..+..++ +|++|+|++|++++..+ ....
T Consensus 192 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~~~~~~~ 271 (306)
T 2z66_A 192 PTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQ 271 (306)
T ss_dssp TTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGGGHHHHH
T ss_pred HHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecccChHHHHH
Confidence 66777777777777777777766666677777788888888888777777777774 78888888888776432 1122
Q ss_pred ccccccccccCCCcccccCCC
Q 048430 561 KLSRLVDFNVSFNGLEGEIPS 581 (973)
Q Consensus 561 ~l~~L~~l~ls~N~l~~~~p~ 581 (973)
-+...+.+.+..+.+.+..|+
T Consensus 272 ~l~~~~~~~~~~~~~~C~~p~ 292 (306)
T 2z66_A 272 WIKDQRQLLVEVERMECATPS 292 (306)
T ss_dssp HHHHTGGGBSCGGGCBEEESG
T ss_pred HHHhhhhhhccccccccCCch
Confidence 344455666667777777765
No 306
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.96 E-value=1.2e-29 Score=294.79 Aligned_cols=192 Identities=17% Similarity=0.195 Sum_probs=132.8
Q ss_pred CCCCcccEEEeecCccccccCcccCCCCCCCEEEccCCcCCCCCchhhhccCcCCeeecCCccccCcCcccccCcCCCCe
Q 048430 368 GNLSNLLVLSLVNNELAGAIPTVLGKLQKLQGLDLNSNKLKGFIPTDLCKLEKLNTLLSNNNALQGQIPTCLANLTSLRH 447 (973)
Q Consensus 368 ~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~ 447 (973)
..+++|++|+|++|.+++..+ .++|++|+|++|.+++..+. .+++|+.|++++|.+++..|..++++++|+.
T Consensus 77 ~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L~L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 148 (487)
T 3oja_A 77 ESLSTLRTLDLNNNYVQELLV-----GPSIETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQY 148 (487)
T ss_dssp TTCTTCCEEECCSSEEEEEEE-----CTTCCEEECCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEE
T ss_pred ccCCCCCEEEecCCcCCCCCC-----CCCcCEEECcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCE
Confidence 334445555555555543221 14556666666666544332 2355666666666666666666666666777
Q ss_pred eeccCCCCCCCCccccc-ccccccEEEecCCcccCCcCcCccCCCCCCeEEccCCcCcccCCcccccCCcCCEEEcccCc
Q 048430 448 LDFRSNSLNSTIPSTFW-SLKYILAVDFSLNSLSGSLPLNIGNLEALGGLNLTGNQLSGYIPSSIGNLKNLDWLALARNA 526 (973)
Q Consensus 448 L~L~~N~l~~~~p~~~~-~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 526 (973)
|+|++|.+++..|..+. .+++|+.|++++|.|++. |. +..+++|+.|+|++|+|++ +|..+..+++|+.|+|++|.
T Consensus 149 L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~Ls~N~ 225 (487)
T 3oja_A 149 LDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNK 225 (487)
T ss_dssp EECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSC
T ss_pred EECCCCCCCCcChHHHhhhCCcccEEecCCCccccc-cc-cccCCCCCEEECCCCCCCC-CCHhHcCCCCccEEEecCCc
Confidence 77777776666666654 567777777777777644 22 3457889999999999985 55558888999999999999
Q ss_pred cccCCCCCcccccccccccccccccC-CCCCccccccccccccccC
Q 048430 527 FQGPIPQSFGSLISLQSLDLSGNNIS-GEIPKSLEKLSRLVDFNVS 571 (973)
Q Consensus 527 l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~l~ls 571 (973)
|++ +|..+..+++|+.|+|++|.++ +.+|..+..++.|+.++++
T Consensus 226 l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~~~~~l~~L~~l~~~ 270 (487)
T 3oja_A 226 LVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (487)
T ss_dssp CCE-ECTTCCCCTTCCEEECTTCCBCHHHHHHHHTTCHHHHHHHHH
T ss_pred Ccc-cchhhccCCCCCEEEcCCCCCcCcchHHHHHhCCCCcEEecc
Confidence 984 7778888999999999999998 6778888888888888886
No 307
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.96 E-value=3.2e-28 Score=268.12 Aligned_cols=226 Identities=23% Similarity=0.280 Sum_probs=198.5
Q ss_pred CCcCcEEEccCCCCCCCCCCcccccccccceeecccCCccccCCCCCCCCCcccEEEeecCccccccCcccCCCCCCCEE
Q 048430 321 CRYLRVLVLDTNPLKGVIPNSIGNLSTSLENFYAGSSQLSGGIPVGFGNLSNLLVLSLVNNELAGAIPTVLGKLQKLQGL 400 (973)
Q Consensus 321 l~~L~~L~L~~N~l~~~~p~~~~~l~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L 400 (973)
.++++.|+|++|.+. . +|..+..+++|++|+|++|.++ .+|..++.+++|++|
T Consensus 80 ~~~l~~L~L~~n~l~-~-------------------------lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L 132 (328)
T 4fcg_A 80 QPGRVALELRSVPLP-Q-------------------------FPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETL 132 (328)
T ss_dssp STTCCEEEEESSCCS-S-------------------------CCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEE
T ss_pred ccceeEEEccCCCch-h-------------------------cChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEE
Confidence 356777777777776 3 3444566788888888888888 778888888888888
Q ss_pred EccCCcCCCCCchhhhccCcCCeeecCCccccCcCcccccC---------cCCCCeeeccCCCCCCCCcccccccccccE
Q 048430 401 DLNSNKLKGFIPTDLCKLEKLNTLLSNNNALQGQIPTCLAN---------LTSLRHLDFRSNSLNSTIPSTFWSLKYILA 471 (973)
Q Consensus 401 ~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~---------l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 471 (973)
+|++|+++ .+|..+.++++|+.|++++|++.+.+|..+.. +++|++|++++|+++ .+|..+..+++|+.
T Consensus 133 ~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~ 210 (328)
T 4fcg_A 133 TLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKS 210 (328)
T ss_dssp EEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCE
T ss_pred ECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCE
Confidence 88888888 67888888888888888888888888877654 999999999999998 78888999999999
Q ss_pred EEecCCcccCCcCcCccCCCCCCeEEccCCcCcccCCcccccCCcCCEEEcccCccccCCCCCccccccccccccccccc
Q 048430 472 VDFSLNSLSGSLPLNIGNLEALGGLNLTGNQLSGYIPSSIGNLKNLDWLALARNAFQGPIPQSFGSLISLQSLDLSGNNI 551 (973)
Q Consensus 472 L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 551 (973)
|++++|+++ .+|..++.+++|+.|+|++|++.+.+|..++.+++|+.|+|++|++.+.+|..|+.+++|++|+|++|++
T Consensus 211 L~L~~N~l~-~l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~ 289 (328)
T 4fcg_A 211 LKIRNSPLS-ALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVN 289 (328)
T ss_dssp EEEESSCCC-CCCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTT
T ss_pred EEccCCCCC-cCchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCc
Confidence 999999999 4777899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccccccccccccCCCccc
Q 048430 552 SGEIPKSLEKLSRLVDFNVSFNGLE 576 (973)
Q Consensus 552 ~~~~p~~~~~l~~L~~l~ls~N~l~ 576 (973)
.+.+|..+.++++|+.++++.|.+.
T Consensus 290 ~~~iP~~l~~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 290 LSRLPSLIAQLPANCIILVPPHLQA 314 (328)
T ss_dssp CCCCCGGGGGSCTTCEEECCGGGSC
T ss_pred hhhccHHHhhccCceEEeCCHHHHH
Confidence 9999999999999999999977654
No 308
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.95 E-value=3.2e-28 Score=266.35 Aligned_cols=251 Identities=24% Similarity=0.221 Sum_probs=213.2
Q ss_pred eEEEccCCcCCCCCCCcchhhhhhhccCCcCcEEEccCCCCCCCCCCcccccccccceeecccCCccccCCCCCCCCCcc
Q 048430 294 QILSLGDNQLTTGSSAQGQIFYSSLAKCRYLRVLVLDTNPLKGVIPNSIGNLSTSLENFYAGSSQLSGGIPVGFGNLSNL 373 (973)
Q Consensus 294 ~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~l~~l~l~~n~l~~~~p~~~~~l~~L 373 (973)
+.++++++.++.+|... .++|++|++++|.++. ..+..|..+++|
T Consensus 10 ~~l~c~~~~l~~ip~~~----------~~~l~~L~L~~n~l~~-------------------------i~~~~~~~l~~L 54 (306)
T 2z66_A 10 TEIRCNSKGLTSVPTGI----------PSSATRLELESNKLQS-------------------------LPHGVFDKLTQL 54 (306)
T ss_dssp TEEECCSSCCSSCCSCC----------CTTCCEEECCSSCCCC-------------------------CCTTTTTTCTTC
T ss_pred CEEEcCCCCcccCCCCC----------CCCCCEEECCCCccCc-------------------------cCHhHhhccccC
Confidence 46677777776654321 1355666666665552 223347889999
Q ss_pred cEEEeecCccccc--cCcccCCCCCCCEEEccCCcCCCCCchhhhccCcCCeeecCCccccCcCc-ccccCcCCCCeeec
Q 048430 374 LVLSLVNNELAGA--IPTVLGKLQKLQGLDLNSNKLKGFIPTDLCKLEKLNTLLSNNNALQGQIP-TCLANLTSLRHLDF 450 (973)
Q Consensus 374 ~~L~Ls~n~l~~~--~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~l~~L~~L~L 450 (973)
++|++++|.++.. .+..+..+++|++|+|++|.+. .+|..+..+++|+.|++++|.+++..+ ..+..+++|++|++
T Consensus 55 ~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l 133 (306)
T 2z66_A 55 TKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDI 133 (306)
T ss_dssp SEEECCSSCCCEEEEEEHHHHSCSCCCEEECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEEC
T ss_pred CEEECCCCccCcccCcccccccccccCEEECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEEC
Confidence 9999999999833 3677778999999999999998 567779999999999999999997765 67889999999999
Q ss_pred cCCCCCCCCcccccccccccEEEecCCcccC-CcCcCccCCCCCCeEEccCCcCcccCCcccccCCcCCEEEcccCcccc
Q 048430 451 RSNSLNSTIPSTFWSLKYILAVDFSLNSLSG-SLPLNIGNLEALGGLNLTGNQLSGYIPSSIGNLKNLDWLALARNAFQG 529 (973)
Q Consensus 451 ~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 529 (973)
++|.+.+..+..|..+++|+.|++++|.+++ .+|..+..+++|+.|+|++|++++..|..|..+++|+.|+|++|++++
T Consensus 134 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 213 (306)
T 2z66_A 134 SHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFS 213 (306)
T ss_dssp TTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSB
T ss_pred CCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCc
Confidence 9999998889999999999999999999987 588899999999999999999998888999999999999999999998
Q ss_pred CCCCCcccccccccccccccccCCCCCccccccc-cccccccCCCcccccCC
Q 048430 530 PIPQSFGSLISLQSLDLSGNNISGEIPKSLEKLS-RLVDFNVSFNGLEGEIP 580 (973)
Q Consensus 530 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~l~ls~N~l~~~~p 580 (973)
..+..|..+++|++|+|++|++++..|..+..++ +|+.|++++|++++..+
T Consensus 214 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~ 265 (306)
T 2z66_A 214 LDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCE 265 (306)
T ss_dssp CCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGG
T ss_pred cChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecccC
Confidence 7777899999999999999999999999999985 89999999999987654
No 309
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.95 E-value=8.4e-28 Score=278.00 Aligned_cols=242 Identities=26% Similarity=0.333 Sum_probs=186.6
Q ss_pred CCCCCCCcCCCCCCCCCCCcEEEecCCCCCCCCCcccccccCCcEEEccCCCCCCCCCccccCCCCCccEEEeeCcccCC
Q 048430 53 PNLSLGGTLPPHVGNLSFLVSLNISGNSFYDTLPNELWHMRRLKIIDFSSNSLSGSLPGDMCNSFTQLESFDVSSNKITG 132 (973)
Q Consensus 53 ~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~ 132 (973)
.+.+++ .+|..+. ++|++|+|++|++.+..|..|.++++|++|+|++|+++ .++...|..+++|++|+|++|++++
T Consensus 62 ~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~-~~~~~~~~~l~~L~~L~L~~n~l~~ 137 (452)
T 3zyi_A 62 TRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIR-QIEVGAFNGLASLNTLELFDNWLTV 137 (452)
T ss_dssp CSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCC-EECTTTTTTCTTCCEEECCSSCCSB
T ss_pred CCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccC-CcChhhccCcccCCEEECCCCcCCc
Confidence 344454 5665543 68899999999998888899999999999999999998 5666667889999999999999997
Q ss_pred CCCccccCCCCCCeEEccCccccccCCccccCCCCCccEEEcccccccccCCCCCCCccccCCCCccEEEecCCcccCcc
Q 048430 133 EFPSAIVNISSLKSIRLDNNSLSGSFPTDLCTRLPSLVQLRLLGNNITGRIPNREIPNEIGNLHNLKILDLGGNNIAGLI 212 (973)
Q Consensus 133 ~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~ 212 (973)
..+..|.++++|++|+|++|+|+ .+|...|..+++|++|+|++|+..+.++ +..|.++++|++|+|++|++++.
T Consensus 138 ~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~l~~~~~l~~i~----~~~~~~l~~L~~L~L~~n~l~~~- 211 (452)
T 3zyi_A 138 IPSGAFEYLSKLRELWLRNNPIE-SIPSYAFNRVPSLMRLDLGELKKLEYIS----EGAFEGLFNLKYLNLGMCNIKDM- 211 (452)
T ss_dssp CCTTTSSSCTTCCEEECCSCCCC-EECTTTTTTCTTCCEEECCCCTTCCEEC----TTTTTTCTTCCEEECTTSCCSSC-
T ss_pred cChhhhcccCCCCEEECCCCCcc-eeCHhHHhcCCcccEEeCCCCCCccccC----hhhccCCCCCCEEECCCCccccc-
Confidence 77777999999999999999998 8888888999999999999954433322 34688999999999999999854
Q ss_pred ccccccCCcceeEEeecccccccCCCCCCccccceeeeccccccccCcchhcccCcccEEEeccccccccCCCccccccc
Q 048430 213 PSMIFNNSNMVAILLYGNHLSGHLPSSIYLPNLENLFLWKNNLSGIIPDSICNASEATILELSSNLFSGLVPNTFGNCRQ 292 (973)
Q Consensus 213 ~~~~~~~~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~ 292 (973)
| .+.. +++|++|+|++|+++++.|..|..+++|+.|+|++|+++++.+..|.++++
T Consensus 212 ~-~~~~-----------------------l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 267 (452)
T 3zyi_A 212 P-NLTP-----------------------LVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLAS 267 (452)
T ss_dssp C-CCTT-----------------------CTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTT
T ss_pred c-cccc-----------------------cccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCC
Confidence 3 2333 566777777777777666777777777777777777777777777777777
Q ss_pred ceEEEccCCcCCCCCCCcchhhhhhhccCCcCcEEEccCCCCC
Q 048430 293 LQILSLGDNQLTTGSSAQGQIFYSSLAKCRYLRVLVLDTNPLK 335 (973)
Q Consensus 293 L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~ 335 (973)
|+.|+|++|+++.++. ..+..+++|+.|+|++|++.
T Consensus 268 L~~L~L~~N~l~~~~~-------~~~~~l~~L~~L~L~~Np~~ 303 (452)
T 3zyi_A 268 LVELNLAHNNLSSLPH-------DLFTPLRYLVELHLHHNPWN 303 (452)
T ss_dssp CCEEECCSSCCSCCCT-------TSSTTCTTCCEEECCSSCEE
T ss_pred CCEEECCCCcCCccCh-------HHhccccCCCEEEccCCCcC
Confidence 7777777777765443 23556677777777777765
No 310
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.95 E-value=8.2e-28 Score=260.11 Aligned_cols=193 Identities=25% Similarity=0.290 Sum_probs=104.0
Q ss_pred CCCCCcccEEEeecCc-cccccCcccCCCCCCCEEEccCCcCCCCCchhhhccCcCCeeecCCccccCcCcccccCcCCC
Q 048430 367 FGNLSNLLVLSLVNNE-LAGAIPTVLGKLQKLQGLDLNSNKLKGFIPTDLCKLEKLNTLLSNNNALQGQIPTCLANLTSL 445 (973)
Q Consensus 367 ~~~l~~L~~L~Ls~n~-l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L 445 (973)
|..+++|++|++++|. +....|..|..+++|++|+|++|++++..|..+.++++|++|++++|.+++..+..+..+++|
T Consensus 76 ~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 155 (285)
T 1ozn_A 76 FTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNL 155 (285)
T ss_dssp TTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTC
T ss_pred cCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCc
Confidence 3444455555555554 443344555555555555555555554444455555555555555555554444445555556
Q ss_pred CeeeccCCCCCCCCcccccccccccEEEecCCcccCCcCcCccCCCCCCeEEccCCcCcccCCcccccCCcCCEEEcccC
Q 048430 446 RHLDFRSNSLNSTIPSTFWSLKYILAVDFSLNSLSGSLPLNIGNLEALGGLNLTGNQLSGYIPSSIGNLKNLDWLALARN 525 (973)
Q Consensus 446 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 525 (973)
++|++++|++++..+..|..+++|+.|++++|++++..|..+..+++|+.|+|++|++++..+..+..+++|+.|+|++|
T Consensus 156 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 235 (285)
T 1ozn_A 156 THLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDN 235 (285)
T ss_dssp CEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSS
T ss_pred cEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCC
Confidence 66666666555444444555555555555555555555555666666666666666666544445666666666666666
Q ss_pred ccccCCCCCcccccccccccccccccCCCCCcccc
Q 048430 526 AFQGPIPQSFGSLISLQSLDLSGNNISGEIPKSLE 560 (973)
Q Consensus 526 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 560 (973)
.+.+..+. ..-+..++.+..+.|.+.+..|..+.
T Consensus 236 ~~~c~~~~-~~~~~~l~~~~~~~~~~~c~~p~~l~ 269 (285)
T 1ozn_A 236 PWVCDCRA-RPLWAWLQKFRGSSSEVPCSLPQRLA 269 (285)
T ss_dssp CEECSGGG-HHHHHHHHHCCSEECCCBEEESGGGT
T ss_pred CccCCCCc-HHHHHHHHhcccccCccccCCchHhC
Confidence 66543321 12223345555555555555555543
No 311
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.95 E-value=1.7e-27 Score=274.49 Aligned_cols=229 Identities=24% Similarity=0.279 Sum_probs=198.6
Q ss_pred cceeecccCCccccCCCCCCCCCcccEEEeecCccccccCcccCCCCCCCEEEccCCcCCCCCchhhhccCcCCeeecCC
Q 048430 349 LENFYAGSSQLSGGIPVGFGNLSNLLVLSLVNNELAGAIPTVLGKLQKLQGLDLNSNKLKGFIPTDLCKLEKLNTLLSNN 428 (973)
Q Consensus 349 l~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~ 428 (973)
++.|++++|++++..+..|.++++|++|+|++|.+++..+..|.++++|++|+|++|+++...+..|..+++|+.|++++
T Consensus 66 l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 145 (440)
T 3zyj_A 66 TRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRN 145 (440)
T ss_dssp CSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEECCS
T ss_pred CcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeCCC
Confidence 34444444444445556688899999999999999988888999999999999999999977777899999999999999
Q ss_pred ccccCcCcccccCcCCCCeeeccCC-CCCCCCcccccccccccEEEecCCcccCCcCcCccCCCCCCeEEccCCcCcccC
Q 048430 429 NALQGQIPTCLANLTSLRHLDFRSN-SLNSTIPSTFWSLKYILAVDFSLNSLSGSLPLNIGNLEALGGLNLTGNQLSGYI 507 (973)
Q Consensus 429 N~l~~~~~~~~~~l~~L~~L~L~~N-~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 507 (973)
|.++...+..|.++++|++|++++| .+....+..|..+++|+.|++++|+++ .+| .+..+++|+.|+|++|++++..
T Consensus 146 N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~~ 223 (440)
T 3zyj_A 146 NPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIP-NLTPLIKLDELDLSGNHLSAIR 223 (440)
T ss_dssp CCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCC-CCTTCSSCCEEECTTSCCCEEC
T ss_pred CcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-ccc-ccCCCcccCEEECCCCccCccC
Confidence 9999888888999999999999995 455445567899999999999999998 556 4888999999999999999888
Q ss_pred CcccccCCcCCEEEcccCccccCCCCCcccccccccccccccccCCCCCccccccccccccccCCCcccccC
Q 048430 508 PSSIGNLKNLDWLALARNAFQGPIPQSFGSLISLQSLDLSGNNISGEIPKSLEKLSRLVDFNVSFNGLEGEI 579 (973)
Q Consensus 508 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~ 579 (973)
|..|.++++|+.|+|++|++++..|..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|++.+..
T Consensus 224 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC 295 (440)
T 3zyj_A 224 PGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNCNC 295 (440)
T ss_dssp TTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEECSS
T ss_pred hhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCccCCC
Confidence 999999999999999999999988999999999999999999999888888999999999999999987643
No 312
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=4.3e-30 Score=281.61 Aligned_cols=260 Identities=15% Similarity=0.177 Sum_probs=130.8
Q ss_pred CcceEEEEEeeCCCCcEEEEecCCCCCCCcCCCCCCCCCCCcEEEecCCCC-CCCCCcccc-------cccCCcEEEccC
Q 048430 31 SVCNWVGVTCSIRHGRVAALSLPNLSLGGTLPPHVGNLSFLVSLNISGNSF-YDTLPNELW-------HMRRLKIIDFSS 102 (973)
Q Consensus 31 ~~c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~-~~~~p~~~~-------~l~~L~~L~Ls~ 102 (973)
.|+.|.++.......+++.|+++++.+ .+|..+... |+.|+|++|.+ .+.+|..+. ++++|++|+|++
T Consensus 29 ~c~~~~~~~~~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~ 104 (312)
T 1wwl_A 29 NCLGAADVELYGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLEN 104 (312)
T ss_dssp GSSSCSEEEEEEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEE
T ss_pred hhhccccEEEEccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccC
Confidence 344444333222233455556666666 555544433 66666666666 334555544 566666666666
Q ss_pred CCCCCCCCcccc-CCCCCccEEEeeCcccCCCCCccccCC-----CCCCeEEccCccccccCCccccCCCCCccEEEccc
Q 048430 103 NSLSGSLPGDMC-NSFTQLESFDVSSNKITGEFPSAIVNI-----SSLKSIRLDNNSLSGSFPTDLCTRLPSLVQLRLLG 176 (973)
Q Consensus 103 n~l~~~~p~~~~-~~l~~L~~L~Ls~N~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~L~~ 176 (973)
|++++.+|..++ ..+++|++|+|++|++++. |..++.+ ++|++|+|++|+++ .++...+..+++|++|+|++
T Consensus 105 n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~Ls~ 182 (312)
T 1wwl_A 105 LEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSL-NFSCEQVRVFPALSTLDLSD 182 (312)
T ss_dssp EBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCC-CCCTTTCCCCSSCCEEECCS
T ss_pred CcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCc-cchHHHhccCCCCCEEECCC
Confidence 666656665543 5566666666666666654 5555555 56666666666665 44444445566666666666
Q ss_pred ccccccCCCCCCCccc--cCCCCccEEEecCCcccCc---cccccccCCcceeEEeecccccccCCC--CCCccccceee
Q 048430 177 NNITGRIPNREIPNEI--GNLHNLKILDLGGNNIAGL---IPSMIFNNSNMVAILLYGNHLSGHLPS--SIYLPNLENLF 249 (973)
Q Consensus 177 N~l~~~~~~~~~p~~l--~~l~~L~~L~L~~N~l~~~---~~~~~~~~~~L~~L~l~~n~l~~~~~~--~~~l~~L~~L~ 249 (973)
|++.+.++ +|..+ +.+++|++|+|++|+|++. ....+..+++|+.|++++|++++.+|. ...+++|++|+
T Consensus 183 N~l~~~~~---~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~ 259 (312)
T 1wwl_A 183 NPELGERG---LISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLN 259 (312)
T ss_dssp CTTCHHHH---HHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEE
T ss_pred CCcCcchH---HHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEE
Confidence 66543210 12222 5556666666666666521 112223444455555555544443321 11244444444
Q ss_pred eccccccccCcchhcccCcccEEEeccccccccCCCcccccccceEEEccCCcCC
Q 048430 250 LWKNNLSGIIPDSICNASEATILELSSNLFSGLVPNTFGNCRQLQILSLGDNQLT 304 (973)
Q Consensus 250 L~~N~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~ 304 (973)
|++|+|+ .+|..+. ++|++|+|++|+|++. |. +..+++|++|++++|+++
T Consensus 260 Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~ 309 (312)
T 1wwl_A 260 LSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFL 309 (312)
T ss_dssp CTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTT
T ss_pred CCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCC
Confidence 4444444 3333333 4444444444444444 22 444444444444444443
No 313
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.95 E-value=2.1e-27 Score=274.71 Aligned_cols=231 Identities=22% Similarity=0.244 Sum_probs=197.3
Q ss_pred ccceeecccCCccccCCCCCCCCCcccEEEeecCccccccCcccCCCCCCCEEEccCCcCCCCCchhhhccCcCCeeecC
Q 048430 348 SLENFYAGSSQLSGGIPVGFGNLSNLLVLSLVNNELAGAIPTVLGKLQKLQGLDLNSNKLKGFIPTDLCKLEKLNTLLSN 427 (973)
Q Consensus 348 ~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~ 427 (973)
.++.|++++|++++..|..|.++++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|..+++|++|+++
T Consensus 76 ~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 155 (452)
T 3zyi_A 76 NTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLR 155 (452)
T ss_dssp TCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEECC
T ss_pred CccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEECC
Confidence 34444444444555556668888999999999999998888899999999999999999997777778899999999999
Q ss_pred CccccCcCcccccCcCCCCeeeccCC-CCCCCCcccccccccccEEEecCCcccCCcCcCccCCCCCCeEEccCCcCccc
Q 048430 428 NNALQGQIPTCLANLTSLRHLDFRSN-SLNSTIPSTFWSLKYILAVDFSLNSLSGSLPLNIGNLEALGGLNLTGNQLSGY 506 (973)
Q Consensus 428 ~N~l~~~~~~~~~~l~~L~~L~L~~N-~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 506 (973)
+|.++...+..|.++++|++|++++| .+....+..|..+++|+.|++++|++++ +| .+..+++|+.|+|++|++++.
T Consensus 156 ~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~Ls~N~l~~~ 233 (452)
T 3zyi_A 156 NNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD-MP-NLTPLVGLEELEMSGNHFPEI 233 (452)
T ss_dssp SCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS-CC-CCTTCTTCCEEECTTSCCSEE
T ss_pred CCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccc-cc-cccccccccEEECcCCcCccc
Confidence 99999877778999999999999984 5554445578899999999999999985 44 588899999999999999988
Q ss_pred CCcccccCCcCCEEEcccCccccCCCCCcccccccccccccccccCCCCCccccccccccccccCCCcccccCC
Q 048430 507 IPSSIGNLKNLDWLALARNAFQGPIPQSFGSLISLQSLDLSGNNISGEIPKSLEKLSRLVDFNVSFNGLEGEIP 580 (973)
Q Consensus 507 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p 580 (973)
.|..|.++++|+.|+|++|++++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|++.+...
T Consensus 234 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~ 307 (452)
T 3zyi_A 234 RPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDCD 307 (452)
T ss_dssp CGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEECSTT
T ss_pred CcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCCCCC
Confidence 89999999999999999999998889999999999999999999998888888999999999999999876543
No 314
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.95 E-value=4.8e-28 Score=261.95 Aligned_cols=210 Identities=24% Similarity=0.222 Sum_probs=137.5
Q ss_pred CcccEEEeecCccccccCcccCCCCCCCEEEccCCcCCCCCchhhhccCcCCeeecCCcc-ccCcCcccccCcCCCCeee
Q 048430 371 SNLLVLSLVNNELAGAIPTVLGKLQKLQGLDLNSNKLKGFIPTDLCKLEKLNTLLSNNNA-LQGQIPTCLANLTSLRHLD 449 (973)
Q Consensus 371 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~-l~~~~~~~~~~l~~L~~L~ 449 (973)
++|++|++++|.+++..+..|..+++|++|+|++|.+++..|..|.++++|++|++++|. +....+..+..+++|++|+
T Consensus 32 ~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~ 111 (285)
T 1ozn_A 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLH 111 (285)
T ss_dssp TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEE
T ss_pred CCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEE
Confidence 456666666666665555566666666666666666665556666666666666666665 5555566666666666666
Q ss_pred ccCCCCCCCCcccccccccccEEEecCCcccCCcCcCccCCCCCCeEEccCCcCcccCCcccccCCcCCEEEcccCcccc
Q 048430 450 FRSNSLNSTIPSTFWSLKYILAVDFSLNSLSGSLPLNIGNLEALGGLNLTGNQLSGYIPSSIGNLKNLDWLALARNAFQG 529 (973)
Q Consensus 450 L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 529 (973)
+++|++++..|..|..+++|+.|++++|++++..+..++.+++|+.|+|++|++++..+..|..+++|+.|+|++|++++
T Consensus 112 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 191 (285)
T 1ozn_A 112 LDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAH 191 (285)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCE
T ss_pred CCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccc
Confidence 66666666666666666666666666666665555556666677777777777765455556666777777777777766
Q ss_pred CCCCCcccccccccccccccccCCCCCccccccccccccccCCCcccccCC
Q 048430 530 PIPQSFGSLISLQSLDLSGNNISGEIPKSLEKLSRLVDFNVSFNGLEGEIP 580 (973)
Q Consensus 530 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p 580 (973)
..|..|..+++|+.|+|++|++++..+..+..+++|+.|++++|++.+..+
T Consensus 192 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~ 242 (285)
T 1ozn_A 192 VHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCR 242 (285)
T ss_dssp ECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGG
T ss_pred cCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCC
Confidence 666667777777777777777766555566667777777777777665544
No 315
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=3.9e-29 Score=274.66 Aligned_cols=266 Identities=18% Similarity=0.201 Sum_probs=172.3
Q ss_pred ceeeeccccccccCcchhcccCcccEEEeccccccccCCCcccccccceEEEccCCcCCCCCCCcchhhhhhhccCCcCc
Q 048430 246 ENLFLWKNNLSGIIPDSICNASEATILELSSNLFSGLVPNTFGNCRQLQILSLGDNQLTTGSSAQGQIFYSSLAKCRYLR 325 (973)
Q Consensus 246 ~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~L~ 325 (973)
+.++++++.+.......+..+++|++|+|++|.++++.|..|..+++|++|++++|++++.+ .+.
T Consensus 13 ~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~---------~~~------ 77 (317)
T 3o53_A 13 KIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETL---------DLE------ 77 (317)
T ss_dssp EEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEE---------EET------
T ss_pred eEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcch---------hhh------
Confidence 44455666665544455555566666666666666666666666666666666666654310 123
Q ss_pred EEEccCCCCCCCCCCcccccccccceeecccCCccccCCCCCCCCCcccEEEeecCccccccCcccCCCCCCCEEEccCC
Q 048430 326 VLVLDTNPLKGVIPNSIGNLSTSLENFYAGSSQLSGGIPVGFGNLSNLLVLSLVNNELAGAIPTVLGKLQKLQGLDLNSN 405 (973)
Q Consensus 326 ~L~L~~N~l~~~~p~~~~~l~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N 405 (973)
.+++|++|++++|++++.. ..++|++|++++|
T Consensus 78 -------------------------------------------~l~~L~~L~Ls~n~l~~l~-----~~~~L~~L~l~~n 109 (317)
T 3o53_A 78 -------------------------------------------SLSTLRTLDLNNNYVQELL-----VGPSIETLHAANN 109 (317)
T ss_dssp -------------------------------------------TCTTCCEEECCSSEEEEEE-----ECTTCCEEECCSS
T ss_pred -------------------------------------------hcCCCCEEECcCCcccccc-----CCCCcCEEECCCC
Confidence 3344444444444444221 1244555555555
Q ss_pred cCCCCCchhhhccCcCCeeecCCccccCcCcccccCcCCCCeeeccCCCCCCCCccccc-ccccccEEEecCCcccCCcC
Q 048430 406 KLKGFIPTDLCKLEKLNTLLSNNNALQGQIPTCLANLTSLRHLDFRSNSLNSTIPSTFW-SLKYILAVDFSLNSLSGSLP 484 (973)
Q Consensus 406 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~ls~N~l~~~~p 484 (973)
++++..+. .+++|+.|++++|++++..+..+..+++|++|++++|++++..+..+. .+++|+.|++++|++++. +
T Consensus 110 ~l~~~~~~---~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~ 185 (317)
T 3o53_A 110 NISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-K 185 (317)
T ss_dssp CCSEEEEC---CCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-E
T ss_pred ccCCcCcc---ccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-c
Confidence 55533222 234455555555555555555555566666666666666655555443 466666666666666643 3
Q ss_pred cCccCCCCCCeEEccCCcCcccCCcccccCCcCCEEEcccCccccCCCCCcccccccccccccccccC-CCCCccccccc
Q 048430 485 LNIGNLEALGGLNLTGNQLSGYIPSSIGNLKNLDWLALARNAFQGPIPQSFGSLISLQSLDLSGNNIS-GEIPKSLEKLS 563 (973)
Q Consensus 485 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~ 563 (973)
. ...+++|+.|+|++|++++ +|..+..+++|+.|+|++|+++ .+|..+..+++|+.|+|++|+++ +.+|..+..++
T Consensus 186 ~-~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~ 262 (317)
T 3o53_A 186 G-QVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQ 262 (317)
T ss_dssp C-CCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCH
T ss_pred c-ccccccCCEEECCCCcCCc-chhhhcccCcccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHHHhccc
Confidence 2 3347889999999999984 5556889999999999999998 57888999999999999999998 77888999999
Q ss_pred cccccccC-CCcccccCCC
Q 048430 564 RLVDFNVS-FNGLEGEIPS 581 (973)
Q Consensus 564 ~L~~l~ls-~N~l~~~~p~ 581 (973)
+|+.++++ .+.+.|..|.
T Consensus 263 ~L~~l~l~~~~~l~~~~~~ 281 (317)
T 3o53_A 263 RVQTVAKQTVKKLTGQNEE 281 (317)
T ss_dssp HHHHHHHHHHHHHHSSSSC
T ss_pred cceEEECCCchhccCCchh
Confidence 99999998 5567777665
No 316
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.95 E-value=1.9e-27 Score=273.93 Aligned_cols=245 Identities=26% Similarity=0.319 Sum_probs=186.6
Q ss_pred EecCCCCCCCcCCCCCCCCCCCcEEEecCCCCCCCCCcccccccCCcEEEccCCCCCCCCCccccCCCCCccEEEeeCcc
Q 048430 50 LSLPNLSLGGTLPPHVGNLSFLVSLNISGNSFYDTLPNELWHMRRLKIIDFSSNSLSGSLPGDMCNSFTQLESFDVSSNK 129 (973)
Q Consensus 50 l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~~l~~L~~L~Ls~N~ 129 (973)
++..+.+++ .+|..+. +.++.|+|++|++.+..+..|.++++|++|+|++|.+. .++...|.++++|++|+|++|+
T Consensus 48 v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~-~i~~~~~~~l~~L~~L~L~~n~ 123 (440)
T 3zyj_A 48 VICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIR-TIEIGAFNGLANLNTLELFDNR 123 (440)
T ss_dssp EECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCC-EECGGGGTTCSSCCEEECCSSC
T ss_pred EEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCC-ccChhhccCCccCCEEECCCCc
Confidence 444555565 6777654 68999999999998888899999999999999999998 6777778899999999999999
Q ss_pred cCCCCCccccCCCCCCeEEccCccccccCCccccCCCCCccEEEcccccccccCCCCCCCccccCCCCccEEEecCCccc
Q 048430 130 ITGEFPSAIVNISSLKSIRLDNNSLSGSFPTDLCTRLPSLVQLRLLGNNITGRIPNREIPNEIGNLHNLKILDLGGNNIA 209 (973)
Q Consensus 130 l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~p~~l~~l~~L~~L~L~~N~l~ 209 (973)
+++..+..|.++++|++|+|++|+|+ .+|...|..+++|++|+|++|+..+.++ +..|.++++|++|+|++|+++
T Consensus 124 l~~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~~~l~~L~~L~l~~~~~l~~i~----~~~~~~l~~L~~L~L~~n~l~ 198 (440)
T 3zyj_A 124 LTTIPNGAFVYLSKLKELWLRNNPIE-SIPSYAFNRIPSLRRLDLGELKRLSYIS----EGAFEGLSNLRYLNLAMCNLR 198 (440)
T ss_dssp CSSCCTTTSCSCSSCCEEECCSCCCC-EECTTTTTTCTTCCEEECCCCTTCCEEC----TTTTTTCSSCCEEECTTSCCS
T ss_pred CCeeCHhHhhccccCceeeCCCCccc-ccCHHHhhhCcccCEeCCCCCCCcceeC----cchhhcccccCeecCCCCcCc
Confidence 99776778999999999999999998 8888888999999999999955433322 346889999999999999998
Q ss_pred CccccccccCCcceeEEeecccccccCCCCCCccccceeeeccccccccCcchhcccCcccEEEeccccccccCCCcccc
Q 048430 210 GLIPSMIFNNSNMVAILLYGNHLSGHLPSSIYLPNLENLFLWKNNLSGIIPDSICNASEATILELSSNLFSGLVPNTFGN 289 (973)
Q Consensus 210 ~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~ 289 (973)
.. |. +.. +++|++|+|++|+++++.|..|..+++|+.|+|++|+++++.+..|.+
T Consensus 199 ~~-~~-~~~-----------------------l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 253 (440)
T 3zyj_A 199 EI-PN-LTP-----------------------LIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDN 253 (440)
T ss_dssp SC-CC-CTT-----------------------CSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTT
T ss_pred cc-cc-cCC-----------------------CcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcC
Confidence 43 42 444 556666666666666666666666666666666666666666666666
Q ss_pred cccceEEEccCCcCCCCCCCcchhhhhhhccCCcCcEEEccCCCCC
Q 048430 290 CRQLQILSLGDNQLTTGSSAQGQIFYSSLAKCRYLRVLVLDTNPLK 335 (973)
Q Consensus 290 l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~ 335 (973)
+++|++|+|++|+++.++. ..+..+++|+.|+|++|++.
T Consensus 254 l~~L~~L~L~~N~l~~~~~-------~~~~~l~~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 254 LQSLVEINLAHNNLTLLPH-------DLFTPLHHLERIHLHHNPWN 292 (440)
T ss_dssp CTTCCEEECTTSCCCCCCT-------TTTSSCTTCCEEECCSSCEE
T ss_pred CCCCCEEECCCCCCCccCh-------hHhccccCCCEEEcCCCCcc
Confidence 6666666666666665432 23455666666666666665
No 317
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=3.7e-29 Score=274.78 Aligned_cols=247 Identities=19% Similarity=0.194 Sum_probs=169.4
Q ss_pred ccccceeeeccccccccCcchhcccCcccEEEeccccccccCCCcccccccceEEEccCCcCCCCCCCcchhhhhhhccC
Q 048430 242 LPNLENLFLWKNNLSGIIPDSICNASEATILELSSNLFSGLVPNTFGNCRQLQILSLGDNQLTTGSSAQGQIFYSSLAKC 321 (973)
Q Consensus 242 l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l 321 (973)
+++|++|+|++|++++..|+.|..+++|++|+|++|.+++..+ |..+++|++|++++|+++++ ...
T Consensus 33 ~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~l------------~~~ 98 (317)
T 3o53_A 33 AWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQEL------------LVG 98 (317)
T ss_dssp GGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEEE------------EEC
T ss_pred CCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCccccc------------cCC
Confidence 6789999999999998888899999999999999999988765 88999999999999988642 223
Q ss_pred CcCcEEEccCCCCCCCCCCcccccccccceeecccCCccccCCCCCCCCCcccEEEeecCccccccCcccCCCCCCCEEE
Q 048430 322 RYLRVLVLDTNPLKGVIPNSIGNLSTSLENFYAGSSQLSGGIPVGFGNLSNLLVLSLVNNELAGAIPTVLGKLQKLQGLD 401 (973)
Q Consensus 322 ~~L~~L~L~~N~l~~~~p~~~~~l~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ 401 (973)
++|+.|++++|++++ ..+.. +++|++|+
T Consensus 99 ~~L~~L~l~~n~l~~-------------------------------------------------~~~~~---~~~L~~L~ 126 (317)
T 3o53_A 99 PSIETLHAANNNISR-------------------------------------------------VSCSR---GQGKKNIY 126 (317)
T ss_dssp TTCCEEECCSSCCSE-------------------------------------------------EEECC---CSSCEEEE
T ss_pred CCcCEEECCCCccCC-------------------------------------------------cCccc---cCCCCEEE
Confidence 455555555555542 22221 23344444
Q ss_pred ccCCcCCCCCchhhhccCcCCeeecCCccccCcCcccc-cCcCCCCeeeccCCCCCCCCcccccccccccEEEecCCccc
Q 048430 402 LNSNKLKGFIPTDLCKLEKLNTLLSNNNALQGQIPTCL-ANLTSLRHLDFRSNSLNSTIPSTFWSLKYILAVDFSLNSLS 480 (973)
Q Consensus 402 Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~-~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~ 480 (973)
+++|++++..+..+..+++|+.|++++|.+++..+..+ ..+++|++|++++|++++. + ....+++|+.|++++|+++
T Consensus 127 l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~ 204 (317)
T 3o53_A 127 LANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-K-GQVVFAKLKTLDLSSNKLA 204 (317)
T ss_dssp CCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-E-CCCCCTTCCEEECCSSCCC
T ss_pred CCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-c-cccccccCCEEECCCCcCC
Confidence 44444444434444444555555555555544444443 2455666666666666543 2 1223666777777777776
Q ss_pred CCcCcCccCCCCCCeEEccCCcCcccCCcccccCCcCCEEEcccCccc-cCCCCCccccccccccccc-ccccCCCCCcc
Q 048430 481 GSLPLNIGNLEALGGLNLTGNQLSGYIPSSIGNLKNLDWLALARNAFQ-GPIPQSFGSLISLQSLDLS-GNNISGEIPKS 558 (973)
Q Consensus 481 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls-~N~l~~~~p~~ 558 (973)
.+|..+..+++|+.|+|++|+++ .+|..+..+++|+.|+|++|.++ +.+|..+..+++|+.|+++ .+.++|..|..
T Consensus 205 -~l~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~~~~ 282 (317)
T 3o53_A 205 -FMGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEEE 282 (317)
T ss_dssp -EECGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSSSSCC
T ss_pred -cchhhhcccCcccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECCCchhccCCchhc
Confidence 34555778888888888888888 57777888888888899888888 7778888888999999998 44667665544
No 318
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.95 E-value=1.3e-26 Score=274.45 Aligned_cols=268 Identities=26% Similarity=0.364 Sum_probs=163.9
Q ss_pred CCcEEEecCCCCCCCCCcccccccCCcEEEccCCCCCCCCCccccCCCCCccEEEeeCcccCCCCCccccCCCCCCeEEc
Q 048430 70 FLVSLNISGNSFYDTLPNELWHMRRLKIIDFSSNSLSGSLPGDMCNSFTQLESFDVSSNKITGEFPSAIVNISSLKSIRL 149 (973)
Q Consensus 70 ~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 149 (973)
.++.|++++|++. .+|..+. ++|++|+|++|.++ .+|. .+++|++|+|++|+|+ .+|. .+++|++|+|
T Consensus 41 ~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~----~l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~L 108 (622)
T 3g06_A 41 GNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA----LPPELRTLEVSGNQLT-SLPV---LPPGLLELSI 108 (622)
T ss_dssp CCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC----CCTTCCEEEECSCCCS-CCCC---CCTTCCEEEE
T ss_pred CCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC----cCCCCCEEEcCCCcCC-cCCC---CCCCCCEEEC
Confidence 3566666666663 5555544 55666666666665 4553 2455666666666655 3443 4455555555
Q ss_pred cCccccccCCccccCCCCCccEEEcccccccccCCCCCCCccccCCCCccEEEecCCcccCccccccccCCcceeEEeec
Q 048430 150 DNNSLSGSFPTDLCTRLPSLVQLRLLGNNITGRIPNREIPNEIGNLHNLKILDLGGNNIAGLIPSMIFNNSNMVAILLYG 229 (973)
Q Consensus 150 ~~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~l~~ 229 (973)
++|+|+ .+|. .+++|+.|+|++|+|+ .+|.. +++|++|+|++|++++. |.
T Consensus 109 s~N~l~-~l~~----~l~~L~~L~L~~N~l~------~lp~~---l~~L~~L~Ls~N~l~~l-~~--------------- 158 (622)
T 3g06_A 109 FSNPLT-HLPA----LPSGLCKLWIFGNQLT------SLPVL---PPGLQELSVSDNQLASL-PA--------------- 158 (622)
T ss_dssp CSCCCC-CCCC----CCTTCCEEECCSSCCS------CCCCC---CTTCCEEECCSSCCSCC-CC---------------
T ss_pred cCCcCC-CCCC----CCCCcCEEECCCCCCC------cCCCC---CCCCCEEECcCCcCCCc-CC---------------
Confidence 555555 3443 2344555555555544 22221 23444444444444421 11
Q ss_pred ccccccCCCCCCccccceeeeccccccccCcchhcccCcccEEEeccccccccCCCcccccccceEEEccCCcCCCCCCC
Q 048430 230 NHLSGHLPSSIYLPNLENLFLWKNNLSGIIPDSICNASEATILELSSNLFSGLVPNTFGNCRQLQILSLGDNQLTTGSSA 309 (973)
Q Consensus 230 n~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 309 (973)
.+++|+.|++++|++++ +| ..+++|+.|++++|.|+++++ .+
T Consensus 159 -----------~~~~L~~L~L~~N~l~~-l~---~~~~~L~~L~Ls~N~l~~l~~----~~------------------- 200 (622)
T 3g06_A 159 -----------LPSELCKLWAYNNQLTS-LP---MLPSGLQELSVSDNQLASLPT----LP------------------- 200 (622)
T ss_dssp -----------CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSCCCC----CC-------------------
T ss_pred -----------ccCCCCEEECCCCCCCC-Cc---ccCCCCcEEECCCCCCCCCCC----cc-------------------
Confidence 13455556666665554 22 233455555555555544221 12
Q ss_pred cchhhhhhhccCCcCcEEEccCCCCCCCCCCcccccccccceeecccCCccccCCCCCCCCCcccEEEeecCccccccCc
Q 048430 310 QGQIFYSSLAKCRYLRVLVLDTNPLKGVIPNSIGNLSTSLENFYAGSSQLSGGIPVGFGNLSNLLVLSLVNNELAGAIPT 389 (973)
Q Consensus 310 ~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~ 389 (973)
++|+.|++++|.++. +| . .+++|+.|++++|++++ +|
T Consensus 201 ------------~~L~~L~L~~N~l~~-l~-------------------------~---~~~~L~~L~Ls~N~L~~-lp- 237 (622)
T 3g06_A 201 ------------SELYKLWAYNNRLTS-LP-------------------------A---LPSGLKELIVSGNRLTS-LP- 237 (622)
T ss_dssp ------------TTCCEEECCSSCCSS-CC-------------------------C---CCTTCCEEECCSSCCSC-CC-
T ss_pred ------------chhhEEECcCCcccc-cC-------------------------C---CCCCCCEEEccCCccCc-CC-
Confidence 344555555555442 11 1 13679999999999995 55
Q ss_pred ccCCCCCCCEEEccCCcCCCCCchhhhccCcCCeeecCCccccCcCcccccCcCCCCeeeccCCCCCCCCcccccccc
Q 048430 390 VLGKLQKLQGLDLNSNKLKGFIPTDLCKLEKLNTLLSNNNALQGQIPTCLANLTSLRHLDFRSNSLNSTIPSTFWSLK 467 (973)
Q Consensus 390 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 467 (973)
..+++|++|+|++|+|+. +|. .+++|+.|++++|+|+ .+|..+.++++|+.|+|++|.+++..|..+..++
T Consensus 238 --~~l~~L~~L~Ls~N~L~~-lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 238 --VLPSELKELMVSGNRLTS-LPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREIT 308 (622)
T ss_dssp --CCCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHHHHHH
T ss_pred --CCCCcCcEEECCCCCCCc-CCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHHHhcc
Confidence 556899999999999994 565 6789999999999999 6788899999999999999999998888887765
No 319
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=4.8e-29 Score=273.25 Aligned_cols=203 Identities=20% Similarity=0.211 Sum_probs=174.5
Q ss_pred CCCcccEEEeecCccccccCccc--CCCCCCCEEEccCCcCCCCCchhhhcc-----CcCCeeecCCccccCcCcccccC
Q 048430 369 NLSNLLVLSLVNNELAGAIPTVL--GKLQKLQGLDLNSNKLKGFIPTDLCKL-----EKLNTLLSNNNALQGQIPTCLAN 441 (973)
Q Consensus 369 ~l~~L~~L~Ls~n~l~~~~p~~~--~~l~~L~~L~Ls~N~l~~~~~~~~~~l-----~~L~~L~l~~N~l~~~~~~~~~~ 441 (973)
++++|++|++++|++++..|..+ ..+++|++|+|++|++++. |..+..+ ++|++|++++|++++..+..+++
T Consensus 93 ~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~ 171 (312)
T 1wwl_A 93 GISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRV 171 (312)
T ss_dssp TTSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCC
T ss_pred CcCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhcc
Confidence 67899999999999998888876 8899999999999999976 8888877 89999999999999888899999
Q ss_pred cCCCCeeeccCCCCCCC--Ccccc--cccccccEEEecCCcccC--CcC-cCccCCCCCCeEEccCCcCcccCC-ccccc
Q 048430 442 LTSLRHLDFRSNSLNST--IPSTF--WSLKYILAVDFSLNSLSG--SLP-LNIGNLEALGGLNLTGNQLSGYIP-SSIGN 513 (973)
Q Consensus 442 l~~L~~L~L~~N~l~~~--~p~~~--~~l~~L~~L~ls~N~l~~--~~p-~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~ 513 (973)
+++|++|++++|++.+. .|..+ ..+++|+.|++++|++++ .++ ..+.++++|+.|+|++|++++..| ..+..
T Consensus 172 l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~ 251 (312)
T 1wwl_A 172 FPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDW 251 (312)
T ss_dssp CSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCC
T ss_pred CCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhh
Confidence 99999999999998765 33344 788999999999999983 122 334577899999999999997775 45677
Q ss_pred CCcCCEEEcccCccccCCCCCcccccccccccccccccCCCCCccccccccccccccCCCcccc
Q 048430 514 LKNLDWLALARNAFQGPIPQSFGSLISLQSLDLSGNNISGEIPKSLEKLSRLVDFNVSFNGLEG 577 (973)
Q Consensus 514 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~ 577 (973)
+++|+.|+|++|+|+ .+|..+. ++|++|||++|+|++. |. +..+++|+.|++++|++++
T Consensus 252 l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 252 PSQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp CTTCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred cCCCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 899999999999999 7888777 8999999999999976 66 8999999999999999976
No 320
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.94 E-value=1.6e-26 Score=247.63 Aligned_cols=171 Identities=22% Similarity=0.351 Sum_probs=116.1
Q ss_pred CCcceEEEEEeeCCCCcEEEEecCCCCCCCcCCCCCCCCCCCcEEEecCCCCCCCCCcccccccCCcEEEccCCCCCCCC
Q 048430 30 ASVCNWVGVTCSIRHGRVAALSLPNLSLGGTLPPHVGNLSFLVSLNISGNSFYDTLPNELWHMRRLKIIDFSSNSLSGSL 109 (973)
Q Consensus 30 ~~~c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~ 109 (973)
.++|.|.|+.|+.. +.++.+++++++++ .+|..+. +.|++|+|++|++.+..+..|+++++|++|+|++|.++ .+
T Consensus 2 ~~~C~~~~~~C~c~-~~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~i 76 (270)
T 2o6q_A 2 EALCKKDGGVCSCN-NNKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQ-TL 76 (270)
T ss_dssp CCCBGGGTCSBEEE-TTTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCS-CC
T ss_pred CccCCCCCCCCEeC-CCCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccC-ee
Confidence 47899999999753 35667889988888 5776554 57888888888887666667888888888888888887 67
Q ss_pred CccccCCCCCccEEEeeCcccCCCCCccccCCCCCCeEEccCccccccCCccccCCCCCccEEEcccccccccCCCCCCC
Q 048430 110 PGDMCNSFTQLESFDVSSNKITGEFPSAIVNISSLKSIRLDNNSLSGSFPTDLCTRLPSLVQLRLLGNNITGRIPNREIP 189 (973)
Q Consensus 110 p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~p 189 (973)
|..+|..+++|++|+|++|++++..+..|.++++|++|+|++|+++ .++...|..+++|++|+|++|+|++. .+
T Consensus 77 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~Ls~n~l~~~-----~~ 150 (270)
T 2o6q_A 77 PAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLK-SLPPRVFDSLTKLTYLSLGYNELQSL-----PK 150 (270)
T ss_dssp CTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCCC-----CT
T ss_pred ChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccC-eeCHHHhCcCcCCCEEECCCCcCCcc-----CH
Confidence 7777777777777777777777655566677777777777777776 45555555555555555555555421 11
Q ss_pred ccccCCCCccEEEecCCcccCc
Q 048430 190 NEIGNLHNLKILDLGGNNIAGL 211 (973)
Q Consensus 190 ~~l~~l~~L~~L~L~~N~l~~~ 211 (973)
..|+.+++|++|+|++|++++.
T Consensus 151 ~~~~~l~~L~~L~L~~n~l~~~ 172 (270)
T 2o6q_A 151 GVFDKLTSLKELRLYNNQLKRV 172 (270)
T ss_dssp TTTTTCTTCCEEECCSSCCSCC
T ss_pred hHccCCcccceeEecCCcCcEe
Confidence 2244455555555555555433
No 321
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.94 E-value=6.2e-30 Score=307.59 Aligned_cols=207 Identities=15% Similarity=0.094 Sum_probs=126.0
Q ss_pred CCCCcccEEEeecCcccc-ccCcccCCCCCCCEEEccC---------CcCCCCCchhhh-ccCcCCeeecCCccccCcCc
Q 048430 368 GNLSNLLVLSLVNNELAG-AIPTVLGKLQKLQGLDLNS---------NKLKGFIPTDLC-KLEKLNTLLSNNNALQGQIP 436 (973)
Q Consensus 368 ~~l~~L~~L~Ls~n~l~~-~~p~~~~~l~~L~~L~Ls~---------N~l~~~~~~~~~-~l~~L~~L~l~~N~l~~~~~ 436 (973)
..+++|+.|++++| +.. .++.....+++|++|+|++ +.+++.....+. .+++|+.|.++.|.+++...
T Consensus 311 ~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~ 389 (594)
T 2p1m_B 311 CQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAAL 389 (594)
T ss_dssp TTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHH
T ss_pred hcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHH
Confidence 34566666666666 332 1222233466677776632 344433222333 36777777777777766555
Q ss_pred cccc-CcCCCCeeecc--C----CCCCCC-----CcccccccccccEEEecCCcccCCcCcCccC-CCCCCeEEccCCcC
Q 048430 437 TCLA-NLTSLRHLDFR--S----NSLNST-----IPSTFWSLKYILAVDFSLNSLSGSLPLNIGN-LEALGGLNLTGNQL 503 (973)
Q Consensus 437 ~~~~-~l~~L~~L~L~--~----N~l~~~-----~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~-l~~L~~L~Ls~N~l 503 (973)
..+. .+++|+.|+++ + |.++.. ++..+..+++|+.|++++ .+++..+..+.. +++|+.|+|++|.+
T Consensus 390 ~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i 468 (594)
T 2p1m_B 390 ITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGD 468 (594)
T ss_dssp HHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCS
T ss_pred HHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCC
Confidence 5554 46778888887 3 455422 122255677888888866 565544444544 77888888888888
Q ss_pred cccCCccc-ccCCcCCEEEcccCccccCCCC-CcccccccccccccccccCCCCCccc-cccccccccccCCCccc
Q 048430 504 SGYIPSSI-GNLKNLDWLALARNAFQGPIPQ-SFGSLISLQSLDLSGNNISGEIPKSL-EKLSRLVDFNVSFNGLE 576 (973)
Q Consensus 504 ~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~l~ls~N~l~ 576 (973)
++..+..+ ..+++|+.|+|++|.+++..+. .+..+++|+.|+|++|+++......+ ..+++|+...+..+.-.
T Consensus 469 ~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~~lp~l~i~~~~~~~~~ 544 (594)
T 2p1m_B 469 SDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVSFGACKLLGQKMPKLNVEVIDERGAP 544 (594)
T ss_dssp SHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCCBHHHHHHHHHHCTTEEEEEECSSSCG
T ss_pred cHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCCCHHHHHHHHHhCCCCEEEEecCCCcc
Confidence 75555444 5678888888888888644433 44557888888888888854333333 44566665555555433
No 322
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.94 E-value=4.6e-30 Score=308.70 Aligned_cols=466 Identities=13% Similarity=0.114 Sum_probs=230.4
Q ss_pred CcceEEEEEeeCCCCcEEEEecCCCCCCCcCCC-CCCCCCCCcEEEecCCCCC---CCCCc------------ccccccC
Q 048430 31 SVCNWVGVTCSIRHGRVAALSLPNLSLGGTLPP-HVGNLSFLVSLNISGNSFY---DTLPN------------ELWHMRR 94 (973)
Q Consensus 31 ~~c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~-~l~~l~~L~~L~L~~n~~~---~~~p~------------~~~~l~~ 94 (973)
-|++|.++.. .....+++.... +..|. .+..+++|++|+|+++... +..|. ....+++
T Consensus 33 vck~W~~~~~----~~~~~l~~~~~~--~~~~~~~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~ 106 (594)
T 2p1m_B 33 VCKSWYEIER----WCRRKVFIGNCY--AVSPATVIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTW 106 (594)
T ss_dssp SCHHHHHHHH----HHCCEEEESSTT--SSCHHHHHHHCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTT
T ss_pred HHHHHHHhhh----hhceEEeecccc--ccCHHHHHhhCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCC
Confidence 4557998822 223455554432 22222 3456788999999987532 22222 1246778
Q ss_pred CcEEEccCCCCCCCCCccccCCCCCccEEEeeCc-ccCCC-CCccccCCCCCCeEEccCccccccCCc---cccCCCCCc
Q 048430 95 LKIIDFSSNSLSGSLPGDMCNSFTQLESFDVSSN-KITGE-FPSAIVNISSLKSIRLDNNSLSGSFPT---DLCTRLPSL 169 (973)
Q Consensus 95 L~~L~Ls~n~l~~~~p~~~~~~l~~L~~L~Ls~N-~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~ip~---~~~~~l~~L 169 (973)
|++|+|++|.+++..+..+...+++|++|+|++| .++.. ++..+.++++|++|+|++|.+++..+. .+...+++|
T Consensus 107 L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L 186 (594)
T 2p1m_B 107 LEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSL 186 (594)
T ss_dssp CCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCC
T ss_pred CCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcC
Confidence 8888888888775555444445788888888888 44432 344445788888888888887643322 223356688
Q ss_pred cEEEcccccccccCCCCCCCccccCCCCccEEEecCC-cccCccccccccCCcceeEEeecc-------cccccCCCCCC
Q 048430 170 VQLRLLGNNITGRIPNREIPNEIGNLHNLKILDLGGN-NIAGLIPSMIFNNSNMVAILLYGN-------HLSGHLPSSIY 241 (973)
Q Consensus 170 ~~L~L~~N~l~~~~~~~~~p~~l~~l~~L~~L~L~~N-~l~~~~~~~~~~~~~L~~L~l~~n-------~l~~~~~~~~~ 241 (973)
++|+|++|. +.+....++..+.++++|++|+|++| .+.+ ++..+..+++|+.|++..+ .+.+..+....
T Consensus 187 ~~L~l~~~~--~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~~l~~ 263 (594)
T 2p1m_B 187 VSLNISCLA--SEVSFSALERLVTRCPNLKSLKLNRAVPLEK-LATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVALSG 263 (594)
T ss_dssp CEEECTTCC--SCCCHHHHHHHHHHCTTCCEEECCTTSCHHH-HHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHHHHHT
T ss_pred cEEEecccC--CcCCHHHHHHHHHhCCCCcEEecCCCCcHHH-HHHHHhcCCcceEcccccccCccchhhHHHHHHHHhc
Confidence 888888876 11111112222345678888888887 4443 6677777777777774433 33333322223
Q ss_pred cccccee-eeccccccccCcchhcccCcccEEEeccccccccCC-CcccccccceEEEccCCcCCCCCCCcchhhhhhhc
Q 048430 242 LPNLENL-FLWKNNLSGIIPDSICNASEATILELSSNLFSGLVP-NTFGNCRQLQILSLGDNQLTTGSSAQGQIFYSSLA 319 (973)
Q Consensus 242 l~~L~~L-~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~ 319 (973)
+++|+.| .+.+... +.++..+..+++|++|+|++|.+++... ..+..+++|++|++++| ++. ..+.....
T Consensus 264 ~~~L~~Ls~~~~~~~-~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~------~~l~~l~~ 335 (594)
T 2p1m_B 264 CKELRCLSGFWDAVP-AYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IED------AGLEVLAS 335 (594)
T ss_dssp CTTCCEEECCBTCCG-GGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHH------HHHHHHHH
T ss_pred CCCcccccCCcccch-hhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCH------HHHHHHHH
Confidence 5555555 3332222 1233344455566666666665443221 12345556666666655 221 11111122
Q ss_pred cCCcCcEEEccCCCCCCCCCCcccccccccceeecccCCccccCCCCC-CCCCcccEEEeecCccccccCcccC-CCCCC
Q 048430 320 KCRYLRVLVLDTNPLKGVIPNSIGNLSTSLENFYAGSSQLSGGIPVGF-GNLSNLLVLSLVNNELAGAIPTVLG-KLQKL 397 (973)
Q Consensus 320 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~~l~~l~l~~n~l~~~~p~~~-~~l~~L~~L~Ls~n~l~~~~p~~~~-~l~~L 397 (973)
.+++|+.|++.++.-.|. ...+.+++.....+ ..+++|+.|.++.|.+++..+..+. .+++|
T Consensus 336 ~~~~L~~L~L~~~~~~g~----------------~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L 399 (594)
T 2p1m_B 336 TCKDLRELRVFPSEPFVM----------------EPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNM 399 (594)
T ss_dssp HCTTCCEEEEECSCTTCS----------------SCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTC
T ss_pred hCCCCCEEEEecCccccc----------------ccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCc
Confidence 355555555533210000 00011111000011 1245555555555555544333333 35555
Q ss_pred CEEEcc--C----CcCCCCCchhhhccCcCCeeecCCccccCcCcccccCcCCCCeeeccCCCCCCCCcccccc-ccccc
Q 048430 398 QGLDLN--S----NKLKGFIPTDLCKLEKLNTLLSNNNALQGQIPTCLANLTSLRHLDFRSNSLNSTIPSTFWS-LKYIL 470 (973)
Q Consensus 398 ~~L~Ls--~----N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~-l~~L~ 470 (973)
+.|+|+ + |.++....+. .++..+..+++|+.|++++ .+++..+..+.. +++|+
T Consensus 400 ~~L~L~~~~~~~~~~l~~~~~~~-------------------~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~ 459 (594)
T 2p1m_B 400 TRFRLCIIEPKAPDYLTLEPLDI-------------------GFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKME 459 (594)
T ss_dssp CEEEEEESSTTCCCTTTCCCTHH-------------------HHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCC
T ss_pred ceeEeecccCCCcccccCCchhh-------------------HHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhcc
Confidence 555555 2 3333110000 0111133444555555544 333332333332 45555
Q ss_pred EEEecCCcccCCcCcCc-cCCCCCCeEEccCCcCcccCCc-ccccCCcCCEEEcccCccccCCCCCc-cccccccccccc
Q 048430 471 AVDFSLNSLSGSLPLNI-GNLEALGGLNLTGNQLSGYIPS-SIGNLKNLDWLALARNAFQGPIPQSF-GSLISLQSLDLS 547 (973)
Q Consensus 471 ~L~ls~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~Ls 547 (973)
.|++++|.+++..+..+ ..+++|+.|+|++|.+++.... .+..+++|+.|++++|+++......+ ..+++|+...+.
T Consensus 460 ~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~~lp~l~i~~~~ 539 (594)
T 2p1m_B 460 MLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVSFGACKLLGQKMPKLNVEVID 539 (594)
T ss_dssp EEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCCBHHHHHHHHHHCTTEEEEEEC
T ss_pred EeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCCCHHHHHHHHHhCCCCEEEEec
Confidence 55555555543333333 4456666666666666433222 23346666666666666643222222 334455444444
Q ss_pred cc
Q 048430 548 GN 549 (973)
Q Consensus 548 ~N 549 (973)
.+
T Consensus 540 ~~ 541 (594)
T 2p1m_B 540 ER 541 (594)
T ss_dssp SS
T ss_pred CC
Confidence 44
No 323
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.93 E-value=2.5e-27 Score=278.96 Aligned_cols=185 Identities=17% Similarity=0.091 Sum_probs=131.7
Q ss_pred cccccCceEEEEEE-eCCCeEEEEEEEeccc----------hhhHHHHHHHHHHHHhc-cCCceeEEEeeeecCCeeEEE
Q 048430 687 LLGSGSFDNVYKAT-LANGVSVAVKVFNLQE----------DRALKSFDTECEVMRRI-RHRNLIKIVSSCSNPGFKALI 754 (973)
Q Consensus 687 ~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~----------~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv 754 (973)
..+.|++|.+..++ ...|+.||||++.... +...++|.+|+++|+++ .|+||+++++++++++..|||
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV 320 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV 320 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence 35566666666654 4458889999986541 22346799999999999 699999999999999999999
Q ss_pred EEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCCC
Q 048430 755 MQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGVD 834 (973)
Q Consensus 755 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 834 (973)
|||++|++|.+++...+ .++.. +|+.||+.||+|+| ++|||||||||+|||++.+|.+||+|||+|+......
T Consensus 321 MEyv~G~~L~d~i~~~~-~l~~~---~I~~QIl~AL~ylH---~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~ 393 (569)
T 4azs_A 321 MEKLPGRLLSDMLAAGE-EIDRE---KILGSLLRSLAALE---KQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDC 393 (569)
T ss_dssp EECCCSEEHHHHHHTTC-CCCHH---HHHHHHHHHHHHHH---HTTCEESCCCGGGEEECTTSCEEECCCTTEESCC---
T ss_pred EecCCCCcHHHHHHhCC-CCCHH---HHHHHHHHHHHHHH---HCCceeccCchHhEEECCCCCEEEeecccCeeCCCCC
Confidence 99999999999998765 56654 48999999999999 8999999999999999999999999999998764322
Q ss_pred CcccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCC
Q 048430 835 PVTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKP 880 (973)
Q Consensus 835 ~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p 880 (973)
......+||++|||||.+.+ .+..++|+||+|++++++.++..+
T Consensus 394 -~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 394 -SWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp -CCSHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred -ccccCceechhhccHHHhCC-CCCCcccccccccchhhhccccch
Confidence 23345679999999998765 567789999999998887666544
No 324
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.93 E-value=1.5e-26 Score=268.80 Aligned_cols=237 Identities=20% Similarity=0.194 Sum_probs=161.8
Q ss_pred ccccceeeeccccccccCcchhcccCcccEEEeccccccccCCCcccccccceEEEccCCcCCCCCCCcchhhhhhhccC
Q 048430 242 LPNLENLFLWKNNLSGIIPDSICNASEATILELSSNLFSGLVPNTFGNCRQLQILSLGDNQLTTGSSAQGQIFYSSLAKC 321 (973)
Q Consensus 242 l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l 321 (973)
+++|++|+|++|.+++..|..|+.+++|++|+|++|.+++.+| |..+++|++|+|++|+|++++ ..
T Consensus 33 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~------------~~ 98 (487)
T 3oja_A 33 AWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELL------------VG 98 (487)
T ss_dssp GGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEE------------EC
T ss_pred CCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCC------------CC
Confidence 5678888888888887777788888888888888888877665 777778888888777775411 12
Q ss_pred CcCcEEEccCCCCCCCCCCcccccccccceeecccCCccccCCCCCCCCCcccEEEeecCccccccCcccCCCCCCCEEE
Q 048430 322 RYLRVLVLDTNPLKGVIPNSIGNLSTSLENFYAGSSQLSGGIPVGFGNLSNLLVLSLVNNELAGAIPTVLGKLQKLQGLD 401 (973)
Q Consensus 322 ~~L~~L~L~~N~l~~~~p~~~~~l~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ 401 (973)
++ |++|++++|.+++..+. .+++|+.|+
T Consensus 99 ~~-------------------------------------------------L~~L~L~~N~l~~~~~~---~l~~L~~L~ 126 (487)
T 3oja_A 99 PS-------------------------------------------------IETLHAANNNISRVSCS---RGQGKKNIY 126 (487)
T ss_dssp TT-------------------------------------------------CCEEECCSSCCCCEEEC---CCSSCEEEE
T ss_pred CC-------------------------------------------------cCEEECcCCcCCCCCcc---ccCCCCEEE
Confidence 34 44444445544433332 234555555
Q ss_pred ccCCcCCCCCchhhhccCcCCeeecCCccccCcCccccc-CcCCCCeeeccCCCCCCCCcccccccccccEEEecCCccc
Q 048430 402 LNSNKLKGFIPTDLCKLEKLNTLLSNNNALQGQIPTCLA-NLTSLRHLDFRSNSLNSTIPSTFWSLKYILAVDFSLNSLS 480 (973)
Q Consensus 402 Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~ 480 (973)
|++|.+++..|..++.+++|+.|++++|.+++..|..+. .+++|+.|+|++|.+++..+ +..+++|+.|++++|.++
T Consensus 127 L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~~~--~~~l~~L~~L~Ls~N~l~ 204 (487)
T 3oja_A 127 LANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKG--QVVFAKLKTLDLSSNKLA 204 (487)
T ss_dssp CCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEEC--CCCCTTCCEEECCSSCCC
T ss_pred CCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccccc--cccCCCCCEEECCCCCCC
Confidence 555555555555555555555566666655555555554 56666666666666664422 224667777777777777
Q ss_pred CCcCcCccCCCCCCeEEccCCcCcccCCcccccCCcCCEEEcccCccc-cCCCCCcccccccccccccc
Q 048430 481 GSLPLNIGNLEALGGLNLTGNQLSGYIPSSIGNLKNLDWLALARNAFQ-GPIPQSFGSLISLQSLDLSG 548 (973)
Q Consensus 481 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~ 548 (973)
+ +|..+..+++|+.|+|++|+|+ .+|..++.+++|+.|++++|.+. +.+|..+..++.|+.|+++.
T Consensus 205 ~-~~~~~~~l~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~l~~N~l~c~~~~~~~~~l~~L~~l~~~~ 271 (487)
T 3oja_A 205 F-MGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQT 271 (487)
T ss_dssp E-ECGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCBCHHHHHHHHTTCHHHHHHHHHH
T ss_pred C-CCHhHcCCCCccEEEecCCcCc-ccchhhccCCCCCEEEcCCCCCcCcchHHHHHhCCCCcEEeccc
Confidence 4 4445778888888888888888 47777888889999999999888 67778888889999988863
No 325
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.93 E-value=2.4e-25 Score=239.53 Aligned_cols=210 Identities=22% Similarity=0.235 Sum_probs=178.9
Q ss_pred CcccEEEeecCccccccCcccCCCCCCCEEEccCCcCCCCCchhhhccCcCCeeecCCccccCcCcccccCcCCCCeeec
Q 048430 371 SNLLVLSLVNNELAGAIPTVLGKLQKLQGLDLNSNKLKGFIPTDLCKLEKLNTLLSNNNALQGQIPTCLANLTSLRHLDF 450 (973)
Q Consensus 371 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L 450 (973)
++|++|++++|++++..+..|..+++|++|+|++|++++..+..|.++++|++|++++|.+++..+..+.++++|++|++
T Consensus 28 ~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 107 (276)
T 2z62_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (276)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEEC
Confidence 46888888888888777778888888888888888888777778888888899999998888887788888899999999
Q ss_pred cCCCCCCCCcccccccccccEEEecCCcccCC-cCcCccCCCCCCeEEccCCcCcccCCcccccCCcCC----EEEcccC
Q 048430 451 RSNSLNSTIPSTFWSLKYILAVDFSLNSLSGS-LPLNIGNLEALGGLNLTGNQLSGYIPSSIGNLKNLD----WLALARN 525 (973)
Q Consensus 451 ~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~----~L~Ls~N 525 (973)
++|.+.+..+..+..+++|+.|++++|++++. +|..++++++|+.|+|++|++++..+..+..+.+|+ .|++++|
T Consensus 108 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n 187 (276)
T 2z62_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLN 187 (276)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSS
T ss_pred CCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCC
Confidence 99998887777888889999999999998863 588899999999999999999977777888777777 8999999
Q ss_pred ccccCCCCCcccccccccccccccccCCCCCccccccccccccccCCCcccccCCC
Q 048430 526 AFQGPIPQSFGSLISLQSLDLSGNNISGEIPKSLEKLSRLVDFNVSFNGLEGEIPS 581 (973)
Q Consensus 526 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~ 581 (973)
++++..+..+.. .+|+.|+|++|++++..+..|..+++|+.|++++|++++..|.
T Consensus 188 ~l~~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~ 242 (276)
T 2z62_A 188 PMNFIQPGAFKE-IRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 242 (276)
T ss_dssp CCCEECTTSSCS-CCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTTT
T ss_pred cccccCccccCC-CcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCCc
Confidence 999666655554 4899999999999987777789999999999999999987775
No 326
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.92 E-value=7e-25 Score=235.83 Aligned_cols=217 Identities=22% Similarity=0.252 Sum_probs=167.0
Q ss_pred cCCCCCCCCCCCcEEEecCCCCCCCCCcccccccCCcEEEccCCCCCCCCCccccCCCCCccEEEeeCcccCCCCCcccc
Q 048430 60 TLPPHVGNLSFLVSLNISGNSFYDTLPNELWHMRRLKIIDFSSNSLSGSLPGDMCNSFTQLESFDVSSNKITGEFPSAIV 139 (973)
Q Consensus 60 ~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 139 (973)
.+|..+. +.|++|+|++|++.+..+..|.++++|++|+|++|++. .++...+..+++|++|+|++|.+++..|..|.
T Consensus 21 ~ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 97 (276)
T 2z62_A 21 KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQ-TIEDGAYQSLSHLSTLILTGNPIQSLALGAFS 97 (276)
T ss_dssp SCCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCC-EECTTTTTTCTTCCEEECTTCCCCEECTTTTT
T ss_pred ccCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCC-ccCHHHccCCcCCCEEECCCCccCccChhhhc
Confidence 4565443 57899999999998777778999999999999999998 67766778899999999999999988888899
Q ss_pred CCCCCCeEEccCccccccCCccccCCCCCccEEEcccccccccCCCCCCCccccCCCCccEEEecCCcccCccccccccC
Q 048430 140 NISSLKSIRLDNNSLSGSFPTDLCTRLPSLVQLRLLGNNITGRIPNREIPNEIGNLHNLKILDLGGNNIAGLIPSMIFNN 219 (973)
Q Consensus 140 ~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~ 219 (973)
++++|++|++++|.++ .++...+..+++|++|+|++|++++. .+|..++++++|++|+|++|++++..+..+..+
T Consensus 98 ~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~----~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 172 (276)
T 2z62_A 98 GLSSLQKLVAVETNLA-SLENFPIGHLKTLKELNVAHNLIQSF----KLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVL 172 (276)
T ss_dssp TCTTCCEEECTTSCCC-CSTTCCCTTCTTCCEEECCSSCCCCC----CCCGGGGGCTTCCEEECCSSCCCEECGGGGHHH
T ss_pred CCccccEEECCCCCcc-ccCchhcccCCCCCEEECcCCcccee----cCchhhccCCCCCEEECCCCCCCcCCHHHhhhh
Confidence 9999999999999998 66666678899999999999999742 367889999999999999999998777777664
Q ss_pred CcceeEEeecccccccCCCCCCccccc-eeeeccccccccCcchhcccCcccEEEeccccccccCCCcccccccceEEEc
Q 048430 220 SNMVAILLYGNHLSGHLPSSIYLPNLE-NLFLWKNNLSGIIPDSICNASEATILELSSNLFSGLVPNTFGNCRQLQILSL 298 (973)
Q Consensus 220 ~~L~~L~l~~n~l~~~~~~~~~l~~L~-~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L 298 (973)
.+|+ .|. +|++++|+++++.+..+.. .+|+.|+|++|+++++++..|..+++|+.|++
T Consensus 173 ~~L~--------------------~l~l~L~ls~n~l~~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 231 (276)
T 2z62_A 173 HQMP--------------------LLNLSLDLSLNPMNFIQPGAFKE-IRLKELALDTNQLKSVPDGIFDRLTSLQKIWL 231 (276)
T ss_dssp HTCT--------------------TCCEEEECCSSCCCEECTTSSCS-CCEEEEECCSSCCSCCCTTTTTTCCSCCEEEC
T ss_pred hhcc--------------------ccceeeecCCCcccccCccccCC-CcccEEECCCCceeecCHhHhcccccccEEEc
Confidence 4443 111 5566666666544444333 35666666666666666666666666777777
Q ss_pred cCCcCCC
Q 048430 299 GDNQLTT 305 (973)
Q Consensus 299 ~~N~l~~ 305 (973)
++|+++.
T Consensus 232 ~~N~~~c 238 (276)
T 2z62_A 232 HTNPWDC 238 (276)
T ss_dssp CSSCBCC
T ss_pred cCCcccc
Confidence 7766654
No 327
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.92 E-value=2.5e-24 Score=230.56 Aligned_cols=206 Identities=24% Similarity=0.272 Sum_probs=160.6
Q ss_pred cccEEEeecCccccccCcccCCCCCCCEEEccCCcCCCCCchhhhccCcCCeeecCCccccCcCcccccCcCCCCeeecc
Q 048430 372 NLLVLSLVNNELAGAIPTVLGKLQKLQGLDLNSNKLKGFIPTDLCKLEKLNTLLSNNNALQGQIPTCLANLTSLRHLDFR 451 (973)
Q Consensus 372 ~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~ 451 (973)
+.+.+++++++++ .+|..+. ++|++|+|++|++++..+..|.++++|++|++++|.++...+..|.++++|++|+++
T Consensus 17 ~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~ 93 (270)
T 2o6q_A 17 NKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVT 93 (270)
T ss_dssp TTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECC
T ss_pred CCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECC
Confidence 4667778877777 4555443 567888888888876666677778888888888888876666667778888888888
Q ss_pred CCCCCCCCcccccccccccEEEecCCcccCCcCcCccCCCCCCeEEccCCcCcccCCcccccCCcCCEEEcccCccccCC
Q 048430 452 SNSLNSTIPSTFWSLKYILAVDFSLNSLSGSLPLNIGNLEALGGLNLTGNQLSGYIPSSIGNLKNLDWLALARNAFQGPI 531 (973)
Q Consensus 452 ~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 531 (973)
+|++++..+..|..+++|+.|++++|++++..+..|+.+++|+.|+|++|++++..+..|..+++|+.|+|++|++++..
T Consensus 94 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 173 (270)
T 2o6q_A 94 DNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVP 173 (270)
T ss_dssp SSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred CCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeC
Confidence 88887777777788888888888888888777777788888888888888888666666788888888888888888776
Q ss_pred CCCcccccccccccccccccCCCCCccccccccccccccCCCcccccCC
Q 048430 532 PQSFGSLISLQSLDLSGNNISGEIPKSLEKLSRLVDFNVSFNGLEGEIP 580 (973)
Q Consensus 532 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p 580 (973)
+..|..+++|++|+|++|+|++..+..|..+++|+.|++++|++.+..+
T Consensus 174 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 222 (270)
T 2o6q_A 174 EGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCTCN 222 (270)
T ss_dssp TTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCSSS
T ss_pred hhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCCCc
Confidence 7778888888888888888887666678888888888888888776554
No 328
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.91 E-value=1.3e-24 Score=232.97 Aligned_cols=200 Identities=23% Similarity=0.237 Sum_probs=119.1
Q ss_pred CcccEEEeecCccccccCcccCCCCCCCEEEccCCcCCCCCchhhhccCcCCeeecCCccccCcCcccccCcCCCCeeec
Q 048430 371 SNLLVLSLVNNELAGAIPTVLGKLQKLQGLDLNSNKLKGFIPTDLCKLEKLNTLLSNNNALQGQIPTCLANLTSLRHLDF 450 (973)
Q Consensus 371 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L 450 (973)
++|+.|++++|.++. + ..+..+++|++|+|++|.+++. ..+..+++|++|++++|.+++..+..+.++++|++|++
T Consensus 41 ~~L~~L~l~~~~i~~-~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 116 (272)
T 3rfs_A 41 NSIDQIIANNSDIKS-V-QGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVL 116 (272)
T ss_dssp TTCCEEECTTSCCCC-C-TTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred cceeeeeeCCCCccc-c-cccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEEC
Confidence 344444444444431 1 1244445555555555555431 24445555555555555555444445555556666666
Q ss_pred cCCCCCCCCcccccccccccEEEecCCcccCCcCcCccCCCCCCeEEccCCcCcccCCcccccCCcCCEEEcccCccccC
Q 048430 451 RSNSLNSTIPSTFWSLKYILAVDFSLNSLSGSLPLNIGNLEALGGLNLTGNQLSGYIPSSIGNLKNLDWLALARNAFQGP 530 (973)
Q Consensus 451 ~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 530 (973)
++|++++..+..|..+++|+.|++++|++++..+..++.+++|+.|+|++|++++..+..|+.+++|+.|+|++|++++.
T Consensus 117 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 196 (272)
T 3rfs_A 117 VENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSV 196 (272)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCcc
Confidence 66666555555556666666666666666655555566667777777777777765555666777777777777777766
Q ss_pred CCCCcccccccccccccccccCCCCCccccccccccccccCCCcccccCCC
Q 048430 531 IPQSFGSLISLQSLDLSGNNISGEIPKSLEKLSRLVDFNVSFNGLEGEIPS 581 (973)
Q Consensus 531 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~ 581 (973)
.|..|..+++|+.|+|++|.+.+. ++.|+.++++.|.++|.+|.
T Consensus 197 ~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~ 240 (272)
T 3rfs_A 197 PDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRN 240 (272)
T ss_dssp CTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBC
T ss_pred CHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccC
Confidence 666667777777777777776644 33567777777777777775
No 329
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.91 E-value=5.4e-24 Score=229.87 Aligned_cols=205 Identities=24% Similarity=0.231 Sum_probs=168.0
Q ss_pred CCCCCcccEEEeecCccccccCcccCCCCCCCEEEccCCcCCCCCchhhhccCcCCeeecCCccccCcCcccccCcCCCC
Q 048430 367 FGNLSNLLVLSLVNNELAGAIPTVLGKLQKLQGLDLNSNKLKGFIPTDLCKLEKLNTLLSNNNALQGQIPTCLANLTSLR 446 (973)
Q Consensus 367 ~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~ 446 (973)
+.++++++++++++|+++ .+|..+. ++++.|+|++|++++..+..|.++++|+.|++++|.+++..+. +.+++|+
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L~ 80 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVLG 80 (290)
T ss_dssp EECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTCC
T ss_pred ccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcCC
Confidence 556788888999998888 4555443 5788899999998877778888888999999999988865433 6788899
Q ss_pred eeeccCCCCCCCCcccccccccccEEEecCCcccCCcCcCccCCCCCCeEEccCCcCcccCCcccccCCcCCEEEcccCc
Q 048430 447 HLDFRSNSLNSTIPSTFWSLKYILAVDFSLNSLSGSLPLNIGNLEALGGLNLTGNQLSGYIPSSIGNLKNLDWLALARNA 526 (973)
Q Consensus 447 ~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 526 (973)
+|++++|+++ .+|..+..+++|+.|++++|++++..|..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|+
T Consensus 81 ~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 159 (290)
T 1p9a_G 81 TLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNN 159 (290)
T ss_dssp EEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSC
T ss_pred EEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCc
Confidence 9999999887 567788888888888888888887767788888888888888888887777778888888888888888
Q ss_pred cccCCCCCcccccccccccccccccCCCCCccccccccccccccCCCccccc
Q 048430 527 FQGPIPQSFGSLISLQSLDLSGNNISGEIPKSLEKLSRLVDFNVSFNGLEGE 578 (973)
Q Consensus 527 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~ 578 (973)
|++..+..|..+++|+.|+|++|+|+ .+|..+..+.+|+.++|++|++.+.
T Consensus 160 l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C~ 210 (290)
T 1p9a_G 160 LTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLCN 210 (290)
T ss_dssp CSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCCS
T ss_pred CCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccCc
Confidence 88666667788888888888888888 6777788888888888888887653
No 330
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.91 E-value=4.6e-24 Score=228.61 Aligned_cols=207 Identities=26% Similarity=0.280 Sum_probs=171.9
Q ss_pred cccceeecccCCccccCCCCCCCCCcccEEEeecCccccccCcccCCCCCCCEEEccCCcCCCCCchhhhccCcCCeeec
Q 048430 347 TSLENFYAGSSQLSGGIPVGFGNLSNLLVLSLVNNELAGAIPTVLGKLQKLQGLDLNSNKLKGFIPTDLCKLEKLNTLLS 426 (973)
Q Consensus 347 ~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l 426 (973)
..++.+++.+|.++. ...+..+++|++|++++|.+++. ..+..+++|++|+|++|.+++..+..+..+++|++|++
T Consensus 41 ~~L~~L~l~~~~i~~--~~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 116 (272)
T 3rfs_A 41 NSIDQIIANNSDIKS--VQGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVL 116 (272)
T ss_dssp TTCCEEECTTSCCCC--CTTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred cceeeeeeCCCCccc--ccccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEEC
Confidence 567888888888774 23578888899999999888853 47888888999999999888777777888888999999
Q ss_pred CCccccCcCcccccCcCCCCeeeccCCCCCCCCcccccccccccEEEecCCcccCCcCcCccCCCCCCeEEccCCcCccc
Q 048430 427 NNNALQGQIPTCLANLTSLRHLDFRSNSLNSTIPSTFWSLKYILAVDFSLNSLSGSLPLNIGNLEALGGLNLTGNQLSGY 506 (973)
Q Consensus 427 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 506 (973)
++|++++..+..+..+++|++|++++|++++..+..|..+++|+.|++++|++++..+..++.+++|+.|+|++|++++.
T Consensus 117 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 196 (272)
T 3rfs_A 117 VENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSV 196 (272)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCcc
Confidence 99998887777788888899999999988877777788888899999999998877777778888899999999999877
Q ss_pred CCcccccCCcCCEEEcccCccccCCCCCcccccccccccccccccCCCCCcccccccc
Q 048430 507 IPSSIGNLKNLDWLALARNAFQGPIPQSFGSLISLQSLDLSGNNISGEIPKSLEKLSR 564 (973)
Q Consensus 507 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 564 (973)
.|..++.+++|+.|+|++|.+.+.. ++|+.|+++.|+++|.+|.+++.+..
T Consensus 197 ~~~~~~~l~~L~~L~l~~N~~~~~~-------~~l~~l~~~~n~~~g~ip~~~~~~~~ 247 (272)
T 3rfs_A 197 PDGVFDRLTSLQYIWLHDNPWDCTC-------PGIRYLSEWINKHSGVVRNSAGSVAP 247 (272)
T ss_dssp CTTTTTTCTTCCEEECCSSCBCCCT-------TTTHHHHHHHHHTGGGBBCTTSCBCG
T ss_pred CHHHHhCCcCCCEEEccCCCccccC-------cHHHHHHHHHHhCCCcccCcccccCC
Confidence 7777888889999999999887544 46888888889998888888777654
No 331
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.91 E-value=1.1e-23 Score=227.44 Aligned_cols=208 Identities=23% Similarity=0.186 Sum_probs=184.9
Q ss_pred ccCCCCCCCEEEccCCcCCCCCchhhhccCcCCeeecCCccccCcCcccccCcCCCCeeeccCCCCCCCCcccccccccc
Q 048430 390 VLGKLQKLQGLDLNSNKLKGFIPTDLCKLEKLNTLLSNNNALQGQIPTCLANLTSLRHLDFRSNSLNSTIPSTFWSLKYI 469 (973)
Q Consensus 390 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 469 (973)
.+.++++++++++++|.++ .+|..+. ++++.|++++|.+++..+..|..+++|++|+|++|.+++..+. ..+++|
T Consensus 5 ~~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L 79 (290)
T 1p9a_G 5 EVSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVL 79 (290)
T ss_dssp EEECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTC
T ss_pred cccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcC
Confidence 4678899999999999999 5666554 6899999999999998899999999999999999999865443 789999
Q ss_pred cEEEecCCcccCCcCcCccCCCCCCeEEccCCcCcccCCcccccCCcCCEEEcccCccccCCCCCccccccccccccccc
Q 048430 470 LAVDFSLNSLSGSLPLNIGNLEALGGLNLTGNQLSGYIPSSIGNLKNLDWLALARNAFQGPIPQSFGSLISLQSLDLSGN 549 (973)
Q Consensus 470 ~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 549 (973)
+.|++++|+++ .+|..+..+++|+.|+|++|+|++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|
T Consensus 80 ~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 158 (290)
T 1p9a_G 80 GTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANN 158 (290)
T ss_dssp CEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTS
T ss_pred CEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCC
Confidence 99999999999 78889999999999999999999877789999999999999999999888888999999999999999
Q ss_pred ccCCCCCccccccccccccccCCCcccccCCCCCCCCccCccccccCcccccCC
Q 048430 550 NISGEIPKSLEKLSRLVDFNVSFNGLEGEIPSGGPFVNFTADSFKQNYALCGSS 603 (973)
Q Consensus 550 ~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~~c~~~ 603 (973)
+|++..+..|..+++|+.|+|++|+++..++.......+....+.+|++.|++.
T Consensus 159 ~l~~l~~~~~~~l~~L~~L~L~~N~l~~ip~~~~~~~~L~~l~L~~Np~~C~c~ 212 (290)
T 1p9a_G 159 NLTELPAGLLNGLENLDTLLLQENSLYTIPKGFFGSHLLPFAFLHGNPWLCNCE 212 (290)
T ss_dssp CCSCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCCCSEEECCSCCBCCSGG
T ss_pred cCCccCHHHhcCcCCCCEEECCCCcCCccChhhcccccCCeEEeCCCCccCcCc
Confidence 999777778899999999999999999544444555566777789999999874
No 332
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.90 E-value=5.8e-24 Score=224.97 Aligned_cols=193 Identities=19% Similarity=0.321 Sum_probs=163.1
Q ss_pred CCcceEEEEEeeCCCCcEEEEecCCCCCCCcCCCCCCCCCCCcEEEecCCCCCCCCCcccccccCCcEEEccCCCCCCCC
Q 048430 30 ASVCNWVGVTCSIRHGRVAALSLPNLSLGGTLPPHVGNLSFLVSLNISGNSFYDTLPNELWHMRRLKIIDFSSNSLSGSL 109 (973)
Q Consensus 30 ~~~c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~ 109 (973)
.+||.|.|.+|... .+.+++++++++ .+|+.+. +.|+.|+|++|++.+..|..|.++++|++|+|++|.++ .+
T Consensus 2 ~~Cp~~~gC~C~~~---~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~~ 74 (251)
T 3m19_A 2 KTCETVTGCTCNEG---KKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQ-TL 74 (251)
T ss_dssp --CHHHHSSEEEGG---GTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCC-CC
T ss_pred ccCCCCCceEcCCC---CeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCC-cc
Confidence 36899999999642 446899999998 7887665 68999999999999888889999999999999999998 46
Q ss_pred CccccCCCCCccEEEeeCcccCCCCCccccCCCCCCeEEccCccccccCCccccCCCCCccEEEcccccccccCCCCCCC
Q 048430 110 PGDMCNSFTQLESFDVSSNKITGEFPSAIVNISSLKSIRLDNNSLSGSFPTDLCTRLPSLVQLRLLGNNITGRIPNREIP 189 (973)
Q Consensus 110 p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~p 189 (973)
+...+..+++|++|+|++|++++..+..|.++++|++|+|++|+|+ .+|...|..+++|++|+|++|+|++. .+
T Consensus 75 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~-----~~ 148 (251)
T 3m19_A 75 SAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLK-SLPSGVFDRLTKLKELRLNTNQLQSI-----PA 148 (251)
T ss_dssp CTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCCC-----CT
T ss_pred CHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCC-CcChhHhccCCcccEEECcCCcCCcc-----CH
Confidence 6667788999999999999999877788999999999999999998 78888888999999999999999732 23
Q ss_pred ccccCCCCccEEEecCCcccCccccccccCCcceeEEeeccccccc
Q 048430 190 NEIGNLHNLKILDLGGNNIAGLIPSMIFNNSNMVAILLYGNHLSGH 235 (973)
Q Consensus 190 ~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~l~~n~l~~~ 235 (973)
..|+.+++|++|+|++|++++..+..+..+++|+.|++++|.++..
T Consensus 149 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 149 GAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp TTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred HHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 4688999999999999999988777888866677666666666544
No 333
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.90 E-value=9.4e-25 Score=255.65 Aligned_cols=186 Identities=17% Similarity=0.161 Sum_probs=145.3
Q ss_pred CCCCccccccCceEEEEEEeCCCeEEEEEEEeccc--------hhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEE
Q 048430 682 FGESNLLGSGSFDNVYKATLANGVSVAVKVFNLQE--------DRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKAL 753 (973)
Q Consensus 682 ~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--------~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 753 (973)
+...++||+|+||.||+|.. .++.+|+|...... ....+.+.+|++++++++||||+++..++...+..++
T Consensus 338 ~~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~l 416 (540)
T 3en9_A 338 KIPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRI 416 (540)
T ss_dssp ----------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEE
T ss_pred CCCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEE
Confidence 34467899999999999954 47889999764321 1124568999999999999999966666666777899
Q ss_pred EEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCC
Q 048430 754 IMQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGV 833 (973)
Q Consensus 754 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 833 (973)
||||+++++|.+++.. +..++.|+++||+||| +++|+||||||+|||++. .+||+|||+++.....
T Consensus 417 VmE~~~ggsL~~~l~~---------~~~i~~qi~~aL~~LH---~~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~ 482 (540)
T 3en9_A 417 MMSYINGKLAKDVIED---------NLDIAYKIGEIVGKLH---KNDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLD 482 (540)
T ss_dssp EEECCCSEEHHHHSTT---------CTHHHHHHHHHHHHHH---HTTEECTTCCTTSEEESS--SEEECCCTTCEECCCH
T ss_pred EEECCCCCCHHHHHHH---------HHHHHHHHHHHHHHHH---HCcCccCCCCHHHEEECC--eEEEEECccCEECCCc
Confidence 9999999999999976 4689999999999999 799999999999999999 9999999999977532
Q ss_pred CCcc------cccccccccccCccCCCC--CCCCcchhHHHHHHHHHHHHhCCCCCC
Q 048430 834 DPVT------QTMTLATIGYMAPEYGSE--GIVSISGDVYSFGILMMETFTRRKPTN 882 (973)
Q Consensus 834 ~~~~------~~~~~~~~~y~aPE~~~~--~~~~~~sDvws~Gvvl~elltg~~p~~ 882 (973)
.... .....||+.|||||.+.. ..|+..+|+|+..+-..+-+.++.+|.
T Consensus 483 ~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 483 EDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp HHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred cccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 2111 134579999999998776 557888999999999999888877763
No 334
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.90 E-value=2.2e-23 Score=218.85 Aligned_cols=203 Identities=19% Similarity=0.234 Sum_probs=116.9
Q ss_pred cCCCCCCCCCCCcEEEecCCCCCCCCCcccccccCCcEEEccCCC-CCCCCCccccCCCCCccEEEeeC-cccCCCCCcc
Q 048430 60 TLPPHVGNLSFLVSLNISGNSFYDTLPNELWHMRRLKIIDFSSNS-LSGSLPGDMCNSFTQLESFDVSS-NKITGEFPSA 137 (973)
Q Consensus 60 ~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~-l~~~~p~~~~~~l~~L~~L~Ls~-N~l~~~~p~~ 137 (973)
.+|. +. ..|++|+|++|++.+..+..|+.+++|++|++++|. +. .+|...|..+++|++|++++ |++++..+..
T Consensus 25 ~ip~-~~--~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~-~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~ 100 (239)
T 2xwt_C 25 RIPS-LP--PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQ-QLESHSFYNLSKVTHIEIRNTRNLTYIDPDA 100 (239)
T ss_dssp SCCC-CC--TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCC-EECTTTEESCTTCCEEEEEEETTCCEECTTS
T ss_pred ccCC-CC--CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcc-eeCHhHcCCCcCCcEEECCCCCCeeEcCHHH
Confidence 4555 32 267778888877765555567777777777777775 55 55555556666666666666 6666544455
Q ss_pred ccCCCCCCeEEccCccccccCCccccCCCCCcc---EEEcccc-cccccCCCCCCCccccCCCCcc-EEEecCCcccCcc
Q 048430 138 IVNISSLKSIRLDNNSLSGSFPTDLCTRLPSLV---QLRLLGN-NITGRIPNREIPNEIGNLHNLK-ILDLGGNNIAGLI 212 (973)
Q Consensus 138 ~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~---~L~L~~N-~l~~~~~~~~~p~~l~~l~~L~-~L~L~~N~l~~~~ 212 (973)
|.++++|++|++++|+++ .+|. +..+++|+ +|++++| ++++.. +..|.++++|+ +|++++|+++
T Consensus 101 f~~l~~L~~L~l~~n~l~-~lp~--~~~l~~L~~L~~L~l~~N~~l~~i~-----~~~~~~l~~L~~~L~l~~n~l~--- 169 (239)
T 2xwt_C 101 LKELPLLKFLGIFNTGLK-MFPD--LTKVYSTDIFFILEITDNPYMTSIP-----VNAFQGLCNETLTLKLYNNGFT--- 169 (239)
T ss_dssp EECCTTCCEEEEEEECCC-SCCC--CTTCCBCCSEEEEEEESCTTCCEEC-----TTTTTTTBSSEEEEECCSCCCC---
T ss_pred hCCCCCCCEEeCCCCCCc-cccc--cccccccccccEEECCCCcchhhcC-----cccccchhcceeEEEcCCCCCc---
Confidence 666666666666666665 3443 34444444 5555554 443211 12344444444 4444444444
Q ss_pred ccccccCCcceeEEeecccccccCCCCCCccccceeeecccc-ccccCcchhccc-CcccEEEeccccccccCCCccccc
Q 048430 213 PSMIFNNSNMVAILLYGNHLSGHLPSSIYLPNLENLFLWKNN-LSGIIPDSICNA-SEATILELSSNLFSGLVPNTFGNC 290 (973)
Q Consensus 213 ~~~~~~~~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L~~N~-l~~~~~~~l~~l-~~L~~L~L~~N~i~~~~~~~~~~l 290 (973)
...+..+..++|++|+|++|+ ++++.+..|..+ ++|+.|++++|+++++++. .+
T Consensus 170 ---------------------~i~~~~~~~~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~---~~ 225 (239)
T 2xwt_C 170 ---------------------SVQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK---GL 225 (239)
T ss_dssp ---------------------EECTTTTTTCEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT---TC
T ss_pred ---------------------ccCHhhcCCCCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccCChh---Hh
Confidence 222222223566777777773 666666666666 6777777777777655443 44
Q ss_pred ccceEEEccCC
Q 048430 291 RQLQILSLGDN 301 (973)
Q Consensus 291 ~~L~~L~L~~N 301 (973)
++|+.|+++++
T Consensus 226 ~~L~~L~l~~~ 236 (239)
T 2xwt_C 226 EHLKELIARNT 236 (239)
T ss_dssp TTCSEEECTTC
T ss_pred ccCceeeccCc
Confidence 56666666554
No 335
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.89 E-value=3.3e-24 Score=240.01 Aligned_cols=265 Identities=18% Similarity=0.176 Sum_probs=127.7
Q ss_pred EEecCCcccCccccccccCCcceeEEeecccccccCCCCCCccccceeeeccccccccCc----chhcccC-cccEEEec
Q 048430 201 LDLGGNNIAGLIPSMIFNNSNMVAILLYGNHLSGHLPSSIYLPNLENLFLWKNNLSGIIP----DSICNAS-EATILELS 275 (973)
Q Consensus 201 L~L~~N~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~----~~l~~l~-~L~~L~L~ 275 (973)
++|++|.+++.+|..+.. .++|++|+|++|.+++..+ +.+..++ +|++|+|+
T Consensus 3 ~~ls~n~~~~~~~~~~~~-----------------------~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls 59 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSI-----------------------PHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLS 59 (362)
T ss_dssp EECCCCTTCCHHHHHHTS-----------------------CTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECC
T ss_pred cccccccchHHHHHHHhC-----------------------CCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECc
Confidence 456666666666655544 2335555555555555444 4455555 56666666
Q ss_pred cccccccCCCccccc-----ccceEEEccCCcCCCCCCCcchhhhhhhccC-CcCcEEEccCCCCCCCCCCccccccccc
Q 048430 276 SNLFSGLVPNTFGNC-----RQLQILSLGDNQLTTGSSAQGQIFYSSLAKC-RYLRVLVLDTNPLKGVIPNSIGNLSTSL 349 (973)
Q Consensus 276 ~N~i~~~~~~~~~~l-----~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l-~~L~~L~L~~N~l~~~~p~~~~~l~~~l 349 (973)
+|.+++..+..|..+ ++|++|+|++|+++.... ..+...+..+ ++|++|++++|++++..+..+...
T Consensus 60 ~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~---~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~---- 132 (362)
T 3goz_A 60 GNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSS---DELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQA---- 132 (362)
T ss_dssp SSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCH---HHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHH----
T ss_pred CCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHH---HHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHH----
Confidence 666655555444443 555566665555543211 1122223333 455555555555543332222111
Q ss_pred ceeecccCCccccCCCCCCC-CCcccEEEeecCcccccc----CcccCCCC-CCCEEEccCCcCCCCCchhhhc----c-
Q 048430 350 ENFYAGSSQLSGGIPVGFGN-LSNLLVLSLVNNELAGAI----PTVLGKLQ-KLQGLDLNSNKLKGFIPTDLCK----L- 418 (973)
Q Consensus 350 ~~l~l~~n~l~~~~p~~~~~-l~~L~~L~Ls~n~l~~~~----p~~~~~l~-~L~~L~Ls~N~l~~~~~~~~~~----l- 418 (973)
+.. .++|++|+|++|.+++.. +..+..++ +|++|+|++|++++..+..+.. +
T Consensus 133 -----------------l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~ 195 (362)
T 3goz_A 133 -----------------FSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASKNCAELAKFLASIP 195 (362)
T ss_dssp -----------------HTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSC
T ss_pred -----------------HHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCC
Confidence 222 135555555555555322 22233333 5666666666555444433332 2
Q ss_pred CcCCeeecCCccccCc----CcccccC-cCCCCeeeccCCCCCCCCcccccccccccEEEecCCcccCCcCcCccCCCCC
Q 048430 419 EKLNTLLSNNNALQGQ----IPTCLAN-LTSLRHLDFRSNSLNSTIPSTFWSLKYILAVDFSLNSLSGSLPLNIGNLEAL 493 (973)
Q Consensus 419 ~~L~~L~l~~N~l~~~----~~~~~~~-l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L 493 (973)
++|+.|+|++|.+++. ++..+.. .++|++|+|++|++++..+..+ ...+..+++|
T Consensus 196 ~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l--------------------~~~~~~l~~L 255 (362)
T 3goz_A 196 ASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSLENL--------------------KLLKDSLKHL 255 (362)
T ss_dssp TTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCCHHHH--------------------HHTTTTTTTC
T ss_pred CCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHHHHHH--------------------HHHHhcCCCc
Confidence 3555555555555432 2222222 2345555555555543322111 1223444555
Q ss_pred CeEEccCCcCcc-------cCCcccccCCcCCEEEcccCccccCCC
Q 048430 494 GGLNLTGNQLSG-------YIPSSIGNLKNLDWLALARNAFQGPIP 532 (973)
Q Consensus 494 ~~L~Ls~N~l~~-------~~p~~~~~l~~L~~L~Ls~N~l~~~~p 532 (973)
+.|+|++|++++ .++..+..+++|+.|+|++|++.+..+
T Consensus 256 ~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~~~ 301 (362)
T 3goz_A 256 QTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSHS 301 (362)
T ss_dssp SEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGGGC
T ss_pred cEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCcch
Confidence 555555555332 123345566667777777777665433
No 336
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.89 E-value=3.5e-25 Score=250.62 Aligned_cols=265 Identities=17% Similarity=0.211 Sum_probs=163.0
Q ss_pred cceeeeccccccccCcchhcccCcccEEEeccccccccCC----CcccccccceEEEccCCcCCCCCCCcchhhhhhhcc
Q 048430 245 LENLFLWKNNLSGIIPDSICNASEATILELSSNLFSGLVP----NTFGNCRQLQILSLGDNQLTTGSSAQGQIFYSSLAK 320 (973)
Q Consensus 245 L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~----~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~ 320 (973)
|+...+....+. .++..+..+++|++|+|++|.++...+ ..|..+++|++|+|++|.+..
T Consensus 11 L~~~~l~~~~~~-~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~--------------- 74 (386)
T 2ca6_A 11 LKLDAITTEDEK-SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGR--------------- 74 (386)
T ss_dssp CEESSCCSHHHH-TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTS---------------
T ss_pred cccCCCCHHHHH-HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCc---------------
Confidence 333334444444 455667777777888888777775533 235566666666666655432
Q ss_pred CCcCcEEEccCCCCCCCCCCcccccccccceeecccCCccccCCCCCCCCCcccEEEeecCcccc----ccCcccCCCCC
Q 048430 321 CRYLRVLVLDTNPLKGVIPNSIGNLSTSLENFYAGSSQLSGGIPVGFGNLSNLLVLSLVNNELAG----AIPTVLGKLQK 396 (973)
Q Consensus 321 l~~L~~L~L~~N~l~~~~p~~~~~l~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~----~~p~~~~~l~~ 396 (973)
+.+.+|..+.. +...|..+++|++|+|++|.+++ .+|..+..+++
T Consensus 75 -------------l~~~~~~~~~~------------------l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~ 123 (386)
T 2ca6_A 75 -------------VKDEIPEALRL------------------LLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTP 123 (386)
T ss_dssp -------------CGGGSHHHHHH------------------HHHHHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTT
T ss_pred -------------cccchhHHHHH------------------HHHHHhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCC
Confidence 11222222211 11223556777777777777765 36667777777
Q ss_pred CCEEEccCCcCCCCCchhhhc----c---------CcCCeeecCCcccc-CcCc---ccccCcCCCCeeeccCCCCC--C
Q 048430 397 LQGLDLNSNKLKGFIPTDLCK----L---------EKLNTLLSNNNALQ-GQIP---TCLANLTSLRHLDFRSNSLN--S 457 (973)
Q Consensus 397 L~~L~Ls~N~l~~~~~~~~~~----l---------~~L~~L~l~~N~l~-~~~~---~~~~~l~~L~~L~L~~N~l~--~ 457 (973)
|++|+|++|.++...+..+.. + ++|+.|++++|+++ ..++ ..+..+++|++|++++|+++ +
T Consensus 124 L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g 203 (386)
T 2ca6_A 124 LEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEG 203 (386)
T ss_dssp CCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHH
T ss_pred CCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhH
Confidence 888888888776443333333 3 67777777777776 2333 34556677777777777775 2
Q ss_pred ---CCcccccccccccEEEecCCccc----CCcCcCccCCCCCCeEEccCCcCccc----CCccc--ccCCcCCEEEccc
Q 048430 458 ---TIPSTFWSLKYILAVDFSLNSLS----GSLPLNIGNLEALGGLNLTGNQLSGY----IPSSI--GNLKNLDWLALAR 524 (973)
Q Consensus 458 ---~~p~~~~~l~~L~~L~ls~N~l~----~~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~--~~l~~L~~L~Ls~ 524 (973)
..|..+..+++|+.|++++|.++ +.+|..+..+++|+.|+|++|++++. +|..+ +.+++|+.|+|++
T Consensus 204 ~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~ 283 (386)
T 2ca6_A 204 IEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQY 283 (386)
T ss_dssp HHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCS
T ss_pred HHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcC
Confidence 23336666777777777777774 45666667777777777777777654 44555 3367777777777
Q ss_pred Ccccc----CCCCCc-ccccccccccccccccCCCCC
Q 048430 525 NAFQG----PIPQSF-GSLISLQSLDLSGNNISGEIP 556 (973)
Q Consensus 525 N~l~~----~~p~~~-~~l~~L~~L~Ls~N~l~~~~p 556 (973)
|.+++ .+|..+ .++++|++|+|++|++++..+
T Consensus 284 n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 284 NEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDD 320 (386)
T ss_dssp SCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSH
T ss_pred CcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchh
Confidence 77775 366555 556777777777777776553
No 337
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.88 E-value=4e-23 Score=225.95 Aligned_cols=200 Identities=17% Similarity=0.162 Sum_probs=134.8
Q ss_pred CcccEEEeecCccccccCccc--CCCCCCCEEEccCCcCCCCCc----hhhhccCcCCeeecCCccccCcCcccccCcCC
Q 048430 371 SNLLVLSLVNNELAGAIPTVL--GKLQKLQGLDLNSNKLKGFIP----TDLCKLEKLNTLLSNNNALQGQIPTCLANLTS 444 (973)
Q Consensus 371 ~~L~~L~Ls~n~l~~~~p~~~--~~l~~L~~L~Ls~N~l~~~~~----~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~ 444 (973)
++|++|++++|.+.+..|..+ ..+++|++|+|++|.+++..+ ..+..+++|++|++++|.+.+..+..++.+++
T Consensus 91 ~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~ 170 (310)
T 4glp_A 91 SRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPA 170 (310)
T ss_dssp SCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTT
T ss_pred CceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCC
Confidence 456777777777776666666 667777777777777765443 33445667777777777777666667777777
Q ss_pred CCeeeccCCCCCCC--C--cccccccccccEEEecCCcccCCcCc----CccCCCCCCeEEccCCcCcccCCcccccC--
Q 048430 445 LRHLDFRSNSLNST--I--PSTFWSLKYILAVDFSLNSLSGSLPL----NIGNLEALGGLNLTGNQLSGYIPSSIGNL-- 514 (973)
Q Consensus 445 L~~L~L~~N~l~~~--~--p~~~~~l~~L~~L~ls~N~l~~~~p~----~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-- 514 (973)
|++|+|++|++.+. + +..+..+++|++|++++|+++ .++. .++.+++|++|+|++|++++..|..+..+
T Consensus 171 L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ 249 (310)
T 4glp_A 171 LTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMW 249 (310)
T ss_dssp CCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCC
T ss_pred CCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccC
Confidence 77777777776532 1 122356667777777777775 2332 24566777777777777776667666665
Q ss_pred -CcCCEEEcccCccccCCCCCcccccccccccccccccCCCCCccccccccccccccCCCccc
Q 048430 515 -KNLDWLALARNAFQGPIPQSFGSLISLQSLDLSGNNISGEIPKSLEKLSRLVDFNVSFNGLE 576 (973)
Q Consensus 515 -~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~ 576 (973)
++|+.|+|++|+|+ .+|..+. ++|+.|+|++|+|++. |. +..+++|+.|++++|+++
T Consensus 250 ~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~L~~N~l~ 307 (310)
T 4glp_A 250 SSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDNLTLDGNPFL 307 (310)
T ss_dssp CTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSCEECSSTTTS
T ss_pred cCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccEEECcCCCCC
Confidence 57778888888877 5666664 6788888888888753 33 567777888888888775
No 338
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.88 E-value=6.8e-25 Score=248.21 Aligned_cols=246 Identities=22% Similarity=0.252 Sum_probs=196.9
Q ss_pred hhhhhccCCcCcEEEccCCCCCCCCCCcccccccccceeecccCCccccCCCCCCCCCcccEEEeecC---ccccccCcc
Q 048430 314 FYSSLAKCRYLRVLVLDTNPLKGVIPNSIGNLSTSLENFYAGSSQLSGGIPVGFGNLSNLLVLSLVNN---ELAGAIPTV 390 (973)
Q Consensus 314 ~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n---~l~~~~p~~ 390 (973)
+...+..+++|+.|+|++|.+....+.. ++..|..+++|++|+|++| ++++.+|..
T Consensus 24 l~~~l~~~~~L~~L~L~~n~i~~~~~~~---------------------l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~ 82 (386)
T 2ca6_A 24 VFAVLLEDDSVKEIVLSGNTIGTEAARW---------------------LSENIASKKDLEIAEFSDIFTGRVKDEIPEA 82 (386)
T ss_dssp TSHHHHHCSCCCEEECTTSEECHHHHHH---------------------HHHTTTTCTTCCEEECCSCCTTSCGGGSHHH
T ss_pred HHHHHhcCCCccEEECCCCCCCHHHHHH---------------------HHHHHHhCCCccEEeCcccccCccccchhHH
Confidence 3445666677777777777666433322 2233667788888888885 444455554
Q ss_pred c-------CCCCCCCEEEccCCcCCC----CCchhhhccCcCCeeecCCccccCcCcccccC----c---------CCCC
Q 048430 391 L-------GKLQKLQGLDLNSNKLKG----FIPTDLCKLEKLNTLLSNNNALQGQIPTCLAN----L---------TSLR 446 (973)
Q Consensus 391 ~-------~~l~~L~~L~Ls~N~l~~----~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~----l---------~~L~ 446 (973)
+ ..+++|++|+|++|.+++ .+|..+..+++|+.|+|++|.++...+..+.. + ++|+
T Consensus 83 ~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~ 162 (386)
T 2ca6_A 83 LRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLR 162 (386)
T ss_dssp HHHHHHHHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCC
T ss_pred HHHHHHHHhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCc
Confidence 4 789999999999999997 47788999999999999999998655544443 3 8999
Q ss_pred eeeccCCCCC-CCCc---ccccccccccEEEecCCcccC-----CcCcCccCCCCCCeEEccCCcCc----ccCCccccc
Q 048430 447 HLDFRSNSLN-STIP---STFWSLKYILAVDFSLNSLSG-----SLPLNIGNLEALGGLNLTGNQLS----GYIPSSIGN 513 (973)
Q Consensus 447 ~L~L~~N~l~-~~~p---~~~~~l~~L~~L~ls~N~l~~-----~~p~~~~~l~~L~~L~Ls~N~l~----~~~p~~~~~ 513 (973)
+|++++|+++ +.++ ..+..+++|+.|++++|+++. ..|..+..+++|+.|+|++|+++ +.+|..+..
T Consensus 163 ~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~ 242 (386)
T 2ca6_A 163 SIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKS 242 (386)
T ss_dssp EEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGG
T ss_pred EEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHcc
Confidence 9999999997 4455 467789999999999999983 34547889999999999999996 578889999
Q ss_pred CCcCCEEEcccCccccC----CCCCc--ccccccccccccccccCC----CCCccc-cccccccccccCCCcccccCC
Q 048430 514 LKNLDWLALARNAFQGP----IPQSF--GSLISLQSLDLSGNNISG----EIPKSL-EKLSRLVDFNVSFNGLEGEIP 580 (973)
Q Consensus 514 l~~L~~L~Ls~N~l~~~----~p~~~--~~l~~L~~L~Ls~N~l~~----~~p~~~-~~l~~L~~l~ls~N~l~~~~p 580 (973)
+++|+.|+|++|.+++. +|..+ +.+++|++|+|++|+|++ .+|..+ .++++|+.|++++|++++..|
T Consensus 243 ~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 243 WPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDD 320 (386)
T ss_dssp CTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSH
T ss_pred CCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchh
Confidence 99999999999999876 56666 348999999999999997 488887 668999999999999986554
No 339
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.88 E-value=7.3e-23 Score=214.88 Aligned_cols=196 Identities=17% Similarity=0.194 Sum_probs=149.6
Q ss_pred cccEEEeecCccccccCcccCCCCCCCEEEccCCc-CCCCCchhhhccCcCCeeecCC-ccccCcCcccccCcCCCCeee
Q 048430 372 NLLVLSLVNNELAGAIPTVLGKLQKLQGLDLNSNK-LKGFIPTDLCKLEKLNTLLSNN-NALQGQIPTCLANLTSLRHLD 449 (973)
Q Consensus 372 ~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~~~~~~~l~~L~~L~l~~-N~l~~~~~~~~~~l~~L~~L~ 449 (973)
+|++|++++|++++..+..|..+++|++|++++|+ ++...+..|.++++|++|++++ |++++..+..|.++++|++|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~ 111 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLG 111 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEe
Confidence 68888888888887767788888888888888886 7766566778888888888887 888877777788888888888
Q ss_pred ccCCCCCCCCccccccccccc---EEEecCC-cccCCcCcCccCCCCCC-eEEccCCcCcccCCcccccCCcCCEEEccc
Q 048430 450 FRSNSLNSTIPSTFWSLKYIL---AVDFSLN-SLSGSLPLNIGNLEALG-GLNLTGNQLSGYIPSSIGNLKNLDWLALAR 524 (973)
Q Consensus 450 L~~N~l~~~~p~~~~~l~~L~---~L~ls~N-~l~~~~p~~~~~l~~L~-~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 524 (973)
+++|++++ +|. |..+++|+ .|++++| ++++..+..|.++++|+ .|++++|+++ .+|......++|+.|+|++
T Consensus 112 l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~~~~L~~L~L~~ 188 (239)
T 2xwt_C 112 IFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNGTKLDAVYLNK 188 (239)
T ss_dssp EEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTTTTTCEEEEEECTT
T ss_pred CCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhhcCCCCCCEEEcCC
Confidence 88888876 555 77777777 8888888 88766666688888888 8888888888 4444333337888888888
Q ss_pred Cc-cccCCCCCcccc-cccccccccccccCCCCCccccccccccccccCCC
Q 048430 525 NA-FQGPIPQSFGSL-ISLQSLDLSGNNISGEIPKSLEKLSRLVDFNVSFN 573 (973)
Q Consensus 525 N~-l~~~~p~~~~~l-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~ls~N 573 (973)
|+ +++..+..|..+ ++|+.|+|++|+|++. |.. .+++|+.|+++++
T Consensus 189 n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l-~~~--~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 189 NKYLTVIDKDAFGGVYSGPSLLDVSQTSVTAL-PSK--GLEHLKELIARNT 236 (239)
T ss_dssp CTTCCEECTTTTTTCSBCCSEEECTTCCCCCC-CCT--TCTTCSEEECTTC
T ss_pred CCCcccCCHHHhhccccCCcEEECCCCccccC-Chh--HhccCceeeccCc
Confidence 84 886667778888 8888888888888754 433 5667777777765
No 340
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.88 E-value=2.5e-22 Score=212.37 Aligned_cols=181 Identities=25% Similarity=0.256 Sum_probs=135.9
Q ss_pred CcccEEEeecCccccccCcccCCCCCCCEEEccCCcCCCCCchhhhccCcCCeeecCCccccCcCcccccCcCCCCeeec
Q 048430 371 SNLLVLSLVNNELAGAIPTVLGKLQKLQGLDLNSNKLKGFIPTDLCKLEKLNTLLSNNNALQGQIPTCLANLTSLRHLDF 450 (973)
Q Consensus 371 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L 450 (973)
.+.++++++++.++ .+|..+. ++|+.|+|++|++++..+..|.++++|++|++++|.+++..+..|.++++|++|+|
T Consensus 14 ~~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 90 (251)
T 3m19_A 14 EGKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGL 90 (251)
T ss_dssp GGGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEEC
Confidence 45678888888888 5565554 57888888888888777777888888888888888888777777788888888888
Q ss_pred cCCCCCCCCcccccccccccEEEecCCcccCCcCcCccCCCCCCeEEccCCcCcccCCcccccCCcCCEEEcccCccccC
Q 048430 451 RSNSLNSTIPSTFWSLKYILAVDFSLNSLSGSLPLNIGNLEALGGLNLTGNQLSGYIPSSIGNLKNLDWLALARNAFQGP 530 (973)
Q Consensus 451 ~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 530 (973)
++|++++..+..|..+++|+.|++++|+|++..+..|..+++|+.|+|++|+|++..+..|+.+++|+.|+|++|++++.
T Consensus 91 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 170 (251)
T 3m19_A 91 ANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSV 170 (251)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCcc
Confidence 88888776667777777777777777777755555567777777777777777755555677777777777777777766
Q ss_pred CCCCcccccccccccccccccCCC
Q 048430 531 IPQSFGSLISLQSLDLSGNNISGE 554 (973)
Q Consensus 531 ~p~~~~~l~~L~~L~Ls~N~l~~~ 554 (973)
.+..|..+++|+.|+|++|++++.
T Consensus 171 ~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 171 PHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp CTTTTTTCTTCCEEECCSCCBCTT
T ss_pred CHHHHhCCCCCCEEEeeCCceeCC
Confidence 666777777777777777777654
No 341
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.88 E-value=3.6e-24 Score=239.68 Aligned_cols=262 Identities=21% Similarity=0.193 Sum_probs=157.7
Q ss_pred eeeeccccccccCcchhcccCcccEEEeccccccccCC----Ccccccc-cceEEEccCCcCCCCCCCcchhhhhhhccC
Q 048430 247 NLFLWKNNLSGIIPDSICNASEATILELSSNLFSGLVP----NTFGNCR-QLQILSLGDNQLTTGSSAQGQIFYSSLAKC 321 (973)
Q Consensus 247 ~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~----~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l 321 (973)
++.+++|.+++.+|..+...++|++|+|++|.+++..+ ..|..++ +|++|+|++|+++.... ..+...+...
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~---~~l~~~l~~~ 78 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNS---DELVQILAAI 78 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCH---HHHHHHHHTS
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHH---HHHHHHHhcc
Confidence 35677788887777777666678888888888777666 5666666 67777777777654221 1111222222
Q ss_pred -CcCcEEEccCCCCCCCCCCcccccccccceeecccCCccccCCCCCCCCCcccEEEeecCccccccCcccCCC-CCCCE
Q 048430 322 -RYLRVLVLDTNPLKGVIPNSIGNLSTSLENFYAGSSQLSGGIPVGFGNLSNLLVLSLVNNELAGAIPTVLGKL-QKLQG 399 (973)
Q Consensus 322 -~~L~~L~L~~N~l~~~~p~~~~~l~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l-~~L~~ 399 (973)
++|++|+|++|++++..+..+.. .+..+ ++|++
T Consensus 79 ~~~L~~L~Ls~n~l~~~~~~~l~~---------------------------------------------~l~~~~~~L~~ 113 (362)
T 3goz_A 79 PANVTSLNLSGNFLSYKSSDELVK---------------------------------------------TLAAIPFTITV 113 (362)
T ss_dssp CTTCCEEECCSSCGGGSCHHHHHH---------------------------------------------HHHTSCTTCCE
T ss_pred CCCccEEECcCCcCChHHHHHHHH---------------------------------------------HHHhCCCCccE
Confidence 45555555555544333322211 12222 44555
Q ss_pred EEccCCcCCCCCchhhhc-----cCcCCeeecCCccccCcCc----ccccCcC-CCCeeeccCCCCCCCCccccccc---
Q 048430 400 LDLNSNKLKGFIPTDLCK-----LEKLNTLLSNNNALQGQIP----TCLANLT-SLRHLDFRSNSLNSTIPSTFWSL--- 466 (973)
Q Consensus 400 L~Ls~N~l~~~~~~~~~~-----l~~L~~L~l~~N~l~~~~~----~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l--- 466 (973)
|+|++|++++..+..+.. .++|++|++++|.+++... ..+..++ +|++|+|++|++++..+..+...
T Consensus 114 L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~ 193 (362)
T 3goz_A 114 LDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASKNCAELAKFLAS 193 (362)
T ss_dssp EECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHT
T ss_pred EECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCchhhHHHHHHHHHh
Confidence 555555554443333322 1355555555555553222 2223333 66666666666665555444332
Q ss_pred --ccccEEEecCCcccCC----cCcCccC-CCCCCeEEccCCcCcccCC----cccccCCcCCEEEcccCccccC-----
Q 048430 467 --KYILAVDFSLNSLSGS----LPLNIGN-LEALGGLNLTGNQLSGYIP----SSIGNLKNLDWLALARNAFQGP----- 530 (973)
Q Consensus 467 --~~L~~L~ls~N~l~~~----~p~~~~~-l~~L~~L~Ls~N~l~~~~p----~~~~~l~~L~~L~Ls~N~l~~~----- 530 (973)
++|+.||+++|.+++. ++..+.. .++|+.|+|++|++++..+ ..+..+++|+.|+|++|.+.+.
T Consensus 194 ~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~ 273 (362)
T 3goz_A 194 IPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQC 273 (362)
T ss_dssp SCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHH
T ss_pred CCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHH
Confidence 4677777777777642 4444555 3589999999999986544 3457789999999999995533
Q ss_pred --CCCCcccccccccccccccccCCCCC
Q 048430 531 --IPQSFGSLISLQSLDLSGNNISGEIP 556 (973)
Q Consensus 531 --~p~~~~~l~~L~~L~Ls~N~l~~~~p 556 (973)
++..+..+++|+.|||++|++....+
T Consensus 274 ~~l~~~~~~l~~L~~LdL~~N~l~~~~~ 301 (362)
T 3goz_A 274 KALGAAFPNIQKIILVDKNGKEIHPSHS 301 (362)
T ss_dssp HHHHTTSTTCCEEEEECTTSCBCCGGGC
T ss_pred HHHHHHhccCCceEEEecCCCcCCCcch
Confidence 34578889999999999999986644
No 342
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.88 E-value=1.7e-22 Score=220.29 Aligned_cols=173 Identities=25% Similarity=0.350 Sum_probs=113.7
Q ss_pred CCCCCcccEEEeecCccccccCcccCCCCCCCEEEccCCcCCCCCchhhhccCcCCeeecCCccccCcCcccccCcCCCC
Q 048430 367 FGNLSNLLVLSLVNNELAGAIPTVLGKLQKLQGLDLNSNKLKGFIPTDLCKLEKLNTLLSNNNALQGQIPTCLANLTSLR 446 (973)
Q Consensus 367 ~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~ 446 (973)
+..+++|++|++++|.+++..+ +..+++|++|+|++|++++. + .+..+++|+.|++++|++++.. .+..+++|+
T Consensus 59 ~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~l~~n~l~~~~--~l~~l~~L~ 132 (308)
T 1h6u_A 59 VQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV-S-AIAGLQSIKTLDLTSTQITDVT--PLAGLSNLQ 132 (308)
T ss_dssp GGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC-G-GGTTCTTCCEEECTTSCCCCCG--GGTTCTTCC
T ss_pred hhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCc-h-hhcCCCCCCEEECCCCCCCCch--hhcCCCCCC
Confidence 3445566666666666664333 66666666666666666642 2 4666666666666666666432 266667777
Q ss_pred eeeccCCCCCCCCcccccccccccEEEecCCcccCCcCcCccCCCCCCeEEccCCcCcccCCcccccCCcCCEEEcccCc
Q 048430 447 HLDFRSNSLNSTIPSTFWSLKYILAVDFSLNSLSGSLPLNIGNLEALGGLNLTGNQLSGYIPSSIGNLKNLDWLALARNA 526 (973)
Q Consensus 447 ~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 526 (973)
+|++++|++++..+ +..+++|+.|++++|++++. +. +..+++|+.|+|++|++++..+ +..+++|+.|+|++|+
T Consensus 133 ~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~-~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~ 206 (308)
T 1h6u_A 133 VLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDL-TP-LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQ 206 (308)
T ss_dssp EEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSC
T ss_pred EEECCCCccCcCcc--ccCCCCccEEEccCCcCCCC-hh-hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCc
Confidence 77777777765433 66677777777777777643 33 6777777777777777774332 6777777777777777
Q ss_pred cccCCCCCcccccccccccccccccCC
Q 048430 527 FQGPIPQSFGSLISLQSLDLSGNNISG 553 (973)
Q Consensus 527 l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 553 (973)
+++..| +..+++|+.|+|++|++++
T Consensus 207 l~~~~~--l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 207 ISDVSP--LANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp CCBCGG--GTTCTTCCEEEEEEEEEEC
T ss_pred cCcccc--ccCCCCCCEEEccCCeeec
Confidence 775443 7777777888888887774
No 343
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.88 E-value=5.4e-22 Score=220.80 Aligned_cols=245 Identities=21% Similarity=0.201 Sum_probs=160.0
Q ss_pred CcceEEEEEeeCCCCcEEEEecCCCCCCCcCCCCCCCCCCCcEEEecCCCCCCCCCcccccccCCcEEEccCCCCCCCCC
Q 048430 31 SVCNWVGVTCSIRHGRVAALSLPNLSLGGTLPPHVGNLSFLVSLNISGNSFYDTLPNELWHMRRLKIIDFSSNSLSGSLP 110 (973)
Q Consensus 31 ~~c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p 110 (973)
+.|.|..|.|+. ++|+ ++|..+ .+++++|+|++|+|...-+..|.++++|++|+|++|++.+.+|
T Consensus 7 C~C~~~~v~C~~------------~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~ 71 (350)
T 4ay9_X 7 CHCSNRVFLCQE------------SKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIE 71 (350)
T ss_dssp SEEETTEEEEES------------TTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEEC
T ss_pred cEeeCCEEEecC------------CCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccC
Confidence 347788888854 3444 567655 3578888999888864444568888888888888888876788
Q ss_pred ccccCCCCCccE-EEeeCcccCCCCCccccCCCCCCeEEccCccccccCCccccCCCCCccEEEccc-ccccccCCCCCC
Q 048430 111 GDMCNSFTQLES-FDVSSNKITGEFPSAIVNISSLKSIRLDNNSLSGSFPTDLCTRLPSLVQLRLLG-NNITGRIPNREI 188 (973)
Q Consensus 111 ~~~~~~l~~L~~-L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~L~~-N~l~~~~~~~~~ 188 (973)
.+.|.++++|.+ ++++.|+++...|..|.++++|++|++++|+|+ .+|...+....++..|++.+ |++....
T Consensus 72 ~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~-~~~~~~~~~~~~l~~l~l~~~~~i~~l~----- 145 (350)
T 4ay9_X 72 ADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIK-HLPDVHKIHSLQKVLLDIQDNINIHTIE----- 145 (350)
T ss_dssp TTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCS-SCCCCTTCCBSSCEEEEEESCTTCCEEC-----
T ss_pred hhHhhcchhhhhhhcccCCcccccCchhhhhccccccccccccccc-cCCchhhcccchhhhhhhcccccccccc-----
Confidence 877888877664 666778888766778888888888888888887 66665555566667777654 4454211
Q ss_pred CccccCCC-CccEEEecCCcccCccccccccCCcceeEEeecccccccCCCCCCccccceeeec-cccccccCcchhccc
Q 048430 189 PNEIGNLH-NLKILDLGGNNIAGLIPSMIFNNSNMVAILLYGNHLSGHLPSSIYLPNLENLFLW-KNNLSGIIPDSICNA 266 (973)
Q Consensus 189 p~~l~~l~-~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L~-~N~l~~~~~~~l~~l 266 (973)
+..|..+. .+++|+|++|+|+.+ |...+. ..+|++|+++ +|.++.+.++.|..+
T Consensus 146 ~~~f~~~~~~l~~L~L~~N~i~~i-~~~~f~-----------------------~~~L~~l~l~~~n~l~~i~~~~f~~l 201 (350)
T 4ay9_X 146 RNSFVGLSFESVILWLNKNGIQEI-HNSAFN-----------------------GTQLDELNLSDNNNLEELPNDVFHGA 201 (350)
T ss_dssp TTSSTTSBSSCEEEECCSSCCCEE-CTTSST-----------------------TEEEEEEECTTCTTCCCCCTTTTTTE
T ss_pred ccchhhcchhhhhhccccccccCC-Chhhcc-----------------------ccchhHHhhccCCcccCCCHHHhccC
Confidence 12344443 466667777766633 333323 4566667765 355665555567777
Q ss_pred CcccEEEeccccccccCCCcccccccceEEEccCCcCCCCCCCcchhhhhhhccCCcCcEEEccC
Q 048430 267 SEATILELSSNLFSGLVPNTFGNCRQLQILSLGDNQLTTGSSAQGQIFYSSLAKCRYLRVLVLDT 331 (973)
Q Consensus 267 ~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~L~~L~L~~ 331 (973)
++|++|+|++|+|+.+++..|.++++|+.+++ +.++.+| .+.++++|+.+++.+
T Consensus 202 ~~L~~LdLs~N~l~~lp~~~~~~L~~L~~l~~--~~l~~lP---------~l~~l~~L~~l~l~~ 255 (350)
T 4ay9_X 202 SGPVILDISRTRIHSLPSYGLENLKKLRARST--YNLKKLP---------TLEKLVALMEASLTY 255 (350)
T ss_dssp ECCSEEECTTSCCCCCCSSSCTTCCEEECTTC--TTCCCCC---------CTTTCCSCCEEECSC
T ss_pred cccchhhcCCCCcCccChhhhccchHhhhccC--CCcCcCC---------CchhCcChhhCcCCC
Confidence 77777777777777776666665555555443 3333322 255667777777654
No 344
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.88 E-value=1.3e-22 Score=222.02 Aligned_cols=230 Identities=20% Similarity=0.210 Sum_probs=175.9
Q ss_pred ccceEEEccCCcCCCCCCCcchhhhhhhccCCcCcEEEccCCCCCCCCCCcccccccccceeecccCCccccCCCCCCCC
Q 048430 291 RQLQILSLGDNQLTTGSSAQGQIFYSSLAKCRYLRVLVLDTNPLKGVIPNSIGNLSTSLENFYAGSSQLSGGIPVGFGNL 370 (973)
Q Consensus 291 ~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~l~~l~l~~n~l~~~~p~~~~~l 370 (973)
..++.|.+.++.++... ......+..+++|++|++++|.+.+..|..+.. ..+
T Consensus 64 ~~l~~l~l~~~~~~~~~----~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~-----------------------~~~ 116 (310)
T 4glp_A 64 LRVRRLTVGAAQVPAQL----LVGALRVLAYSRLKELTLEDLKITGTMPPLPLE-----------------------ATG 116 (310)
T ss_dssp CCCCEEEECSCCCBHHH----HHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSS-----------------------CCC
T ss_pred cceeEEEEeCCcCCHHH----HHHHHHhcccCceeEEEeeCCEeccchhhhhhh-----------------------ccC
Confidence 34677888877765310 001112233466888888888777665544210 677
Q ss_pred CcccEEEeecCccccccC----cccCCCCCCCEEEccCCcCCCCCchhhhccCcCCeeecCCccccCc--C--cccccCc
Q 048430 371 SNLLVLSLVNNELAGAIP----TVLGKLQKLQGLDLNSNKLKGFIPTDLCKLEKLNTLLSNNNALQGQ--I--PTCLANL 442 (973)
Q Consensus 371 ~~L~~L~Ls~n~l~~~~p----~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~--~--~~~~~~l 442 (973)
++|++|++++|.+++..+ ..+..+++|++|+|++|++.+..+..+..+++|++|++++|++.+. + +..+..+
T Consensus 117 ~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l 196 (310)
T 4glp_A 117 LALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKF 196 (310)
T ss_dssp BCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSS
T ss_pred CCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcC
Confidence 888999999999886544 3456788999999999999888788888999999999999987652 2 2345788
Q ss_pred CCCCeeeccCCCCCCCCcc----cccccccccEEEecCCcccCCcCcCccCC---CCCCeEEccCCcCcccCCcccccCC
Q 048430 443 TSLRHLDFRSNSLNSTIPS----TFWSLKYILAVDFSLNSLSGSLPLNIGNL---EALGGLNLTGNQLSGYIPSSIGNLK 515 (973)
Q Consensus 443 ~~L~~L~L~~N~l~~~~p~----~~~~l~~L~~L~ls~N~l~~~~p~~~~~l---~~L~~L~Ls~N~l~~~~p~~~~~l~ 515 (973)
++|++|+|++|+++. ++. .+..+++|+.||+++|++++..|..+..+ ++|+.|+|++|+|+ .+|..+. +
T Consensus 197 ~~L~~L~Ls~N~l~~-l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~ 272 (310)
T 4glp_A 197 PAIQNLALRNTGMET-PTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--A 272 (310)
T ss_dssp CCCCSCBCCSSCCCC-HHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--S
T ss_pred CCCCEEECCCCCCCc-hHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--C
Confidence 999999999999973 333 35678999999999999998878888777 69999999999999 6787775 7
Q ss_pred cCCEEEcccCccccCCCCCcccccccccccccccccCC
Q 048430 516 NLDWLALARNAFQGPIPQSFGSLISLQSLDLSGNNISG 553 (973)
Q Consensus 516 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 553 (973)
+|+.|+|++|+|++. |. +..+++|+.|+|++|+|+.
T Consensus 273 ~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 273 KLRVLDLSSNRLNRA-PQ-PDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp CCSCEECCSCCCCSC-CC-TTSCCCCSCEECSSTTTSC
T ss_pred CCCEEECCCCcCCCC-ch-hhhCCCccEEECcCCCCCC
Confidence 999999999999954 44 7888999999999999974
No 345
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.87 E-value=2.7e-23 Score=230.48 Aligned_cols=252 Identities=18% Similarity=0.214 Sum_probs=119.6
Q ss_pred cceeeeccccccccCcchhccc--CcccEEEeccccccccCCCcccccccceEEEccCCcCCCCCCCcchhhhhhhccCC
Q 048430 245 LENLFLWKNNLSGIIPDSICNA--SEATILELSSNLFSGLVPNTFGNCRQLQILSLGDNQLTTGSSAQGQIFYSSLAKCR 322 (973)
Q Consensus 245 L~~L~L~~N~l~~~~~~~l~~l--~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~ 322 (973)
++.+++++|.+. +..+..+ ++++.|++++|.+.+..+. +..+++|++|++++|.++. ...+..
T Consensus 49 ~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~------~~~~~~----- 113 (336)
T 2ast_B 49 WQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEV------STLHGI----- 113 (336)
T ss_dssp SSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECH------HHHHHH-----
T ss_pred heeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCH------HHHHHH-----
Confidence 556666666655 3455555 6666666666666665544 3345556666665555432 001111
Q ss_pred cCcEEEccCCCCCCCCCCcccccccccceeecccCCccccCCCCCCCCCcccEEEeecCccccccCcccCCCCCCCEEEc
Q 048430 323 YLRVLVLDTNPLKGVIPNSIGNLSTSLENFYAGSSQLSGGIPVGFGNLSNLLVLSLVNNELAGAIPTVLGKLQKLQGLDL 402 (973)
Q Consensus 323 ~L~~L~L~~N~l~~~~p~~~~~l~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 402 (973)
+..+++|++|++++|.+++..+..+..+++|++|+|
T Consensus 114 --------------------------------------------~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L 149 (336)
T 2ast_B 114 --------------------------------------------LSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNL 149 (336)
T ss_dssp --------------------------------------------HTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEEC
T ss_pred --------------------------------------------HhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEEC
Confidence 233444444444444444444444555555555555
Q ss_pred cCC-cCCCC-CchhhhccCcCCeeecCCc-cccCc-CcccccCcC-CCCeeeccCCCCCCCCcccccccccccEEEecCC
Q 048430 403 NSN-KLKGF-IPTDLCKLEKLNTLLSNNN-ALQGQ-IPTCLANLT-SLRHLDFRSNSLNSTIPSTFWSLKYILAVDFSLN 477 (973)
Q Consensus 403 s~N-~l~~~-~~~~~~~l~~L~~L~l~~N-~l~~~-~~~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N 477 (973)
++| .+++. ++..+.++++|+.|++++| .+++. ++..+..++ +|++|++++|.+
T Consensus 150 ~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~---------------------- 207 (336)
T 2ast_B 150 SGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRK---------------------- 207 (336)
T ss_dssp TTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGG----------------------
T ss_pred CCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcc----------------------
Confidence 555 34421 3333444444555555444 44432 233344444 555555555421
Q ss_pred ccc-CCcCcCccCCCCCCeEEccCCc-CcccCCcccccCCcCCEEEcccCc-cccCCCCCcccccccccccccccccCCC
Q 048430 478 SLS-GSLPLNIGNLEALGGLNLTGNQ-LSGYIPSSIGNLKNLDWLALARNA-FQGPIPQSFGSLISLQSLDLSGNNISGE 554 (973)
Q Consensus 478 ~l~-~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 554 (973)
.++ +.+|..+..+++|+.|++++|. +++..+..++.+++|+.|+|++|. +.......++.+++|+.|+|++| ++
T Consensus 208 ~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~-i~-- 284 (336)
T 2ast_B 208 NLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI-VP-- 284 (336)
T ss_dssp GSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS-SC--
T ss_pred cCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc-cC--
Confidence 122 1233333444455555555554 443444445555555555555553 11111113455555555555555 22
Q ss_pred CCcccccc-ccccccccCCCcccccCCC
Q 048430 555 IPKSLEKL-SRLVDFNVSFNGLEGEIPS 581 (973)
Q Consensus 555 ~p~~~~~l-~~L~~l~ls~N~l~~~~p~ 581 (973)
...+..+ ..+..|++++|++++..|.
T Consensus 285 -~~~~~~l~~~l~~L~l~~n~l~~~~~~ 311 (336)
T 2ast_B 285 -DGTLQLLKEALPHLQINCSHFTTIARP 311 (336)
T ss_dssp -TTCHHHHHHHSTTSEESCCCSCCTTCS
T ss_pred -HHHHHHHHhhCcceEEecccCccccCC
Confidence 1233333 2355555666666666654
No 346
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.87 E-value=5.5e-22 Score=203.35 Aligned_cols=188 Identities=23% Similarity=0.343 Sum_probs=137.2
Q ss_pred CCCcceEEEEEeeCCCCcEEEEecCCCCCCCcCCCCCCCCCCCcEEEecCCCCCCCCCcccccccCCcEEEccCCCCCCC
Q 048430 29 SASVCNWVGVTCSIRHGRVAALSLPNLSLGGTLPPHVGNLSFLVSLNISGNSFYDTLPNELWHMRRLKIIDFSSNSLSGS 108 (973)
Q Consensus 29 ~~~~c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~ 108 (973)
....|.|.+|.|+.. +++ .+|..+ .++|++|+|++|++.+..+..++.+++|++|+|++|++. .
T Consensus 3 ~~C~C~~~~v~c~~~------------~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~ 66 (208)
T 2o6s_A 3 SRCSCSGTTVECYSQ------------GRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQ-S 66 (208)
T ss_dssp TTCEEETTEEECCSS------------CCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCC-C
T ss_pred CCCEECCCEEEecCC------------Ccc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccC-c
Confidence 345689999999753 222 345433 357888999999887666666788888888888888887 6
Q ss_pred CCccccCCCCCccEEEeeCcccCCCCCccccCCCCCCeEEccCccccccCCccccCCCCCccEEEcccccccccCCCCCC
Q 048430 109 LPGDMCNSFTQLESFDVSSNKITGEFPSAIVNISSLKSIRLDNNSLSGSFPTDLCTRLPSLVQLRLLGNNITGRIPNREI 188 (973)
Q Consensus 109 ~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 188 (973)
+|...|..+++|++|+|++|++++..+..|.++++|++|+|++|+|+ .+|...|..+++|++|+|++|++++. .
T Consensus 67 ~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~l~~N~l~~~-----~ 140 (208)
T 2o6s_A 67 LPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQ-SLPDGVFDKLTQLKDLRLYQNQLKSV-----P 140 (208)
T ss_dssp CCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCSCC-----C
T ss_pred cChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCc-ccCHhHhccCCcCCEEECCCCcccee-----C
Confidence 77777778888888888888888666666788888888888888887 66666666777777777777777632 1
Q ss_pred CccccCCCCccEEEecCCcccCccccccccCCcceeEEeecccccccCCCCCCccccceeeeccccccccCcchhcccCc
Q 048430 189 PNEIGNLHNLKILDLGGNNIAGLIPSMIFNNSNMVAILLYGNHLSGHLPSSIYLPNLENLFLWKNNLSGIIPDSICNASE 268 (973)
Q Consensus 189 p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~ 268 (973)
+..+..+++|++|+|++|.+.+. +++|++|+++.|+++|.+|+.++.++.
T Consensus 141 ~~~~~~l~~L~~L~l~~N~~~~~------------------------------~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 141 DGVFDRLTSLQYIWLHDNPWDCT------------------------------CPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp TTTTTTCTTCCEEECCSCCBCCC------------------------------TTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred HHHhccCCCccEEEecCCCeecC------------------------------CCCHHHHHHHHHhCCceeeccCccccC
Confidence 23466677777777777765532 567788888888888888887776654
No 347
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.87 E-value=3.2e-23 Score=229.86 Aligned_cols=179 Identities=21% Similarity=0.248 Sum_probs=124.2
Q ss_pred CCCCCCEEEccCCcCCCC-CchhhhccCcCCeeecCCccccCcCcccccCcCCCCeeeccCC-CCCC-CCcccccccccc
Q 048430 393 KLQKLQGLDLNSNKLKGF-IPTDLCKLEKLNTLLSNNNALQGQIPTCLANLTSLRHLDFRSN-SLNS-TIPSTFWSLKYI 469 (973)
Q Consensus 393 ~l~~L~~L~Ls~N~l~~~-~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N-~l~~-~~p~~~~~l~~L 469 (973)
.+++|++|+|++|.+++. ++..+..+++|+.|++++|.+++..+..++.+++|++|++++| .+++ .++..+..+++|
T Consensus 91 ~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L 170 (336)
T 2ast_B 91 SPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRL 170 (336)
T ss_dssp CCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTC
T ss_pred cCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCC
Confidence 344444444444444432 3444444555555555555544444555555556666666666 4443 244555666666
Q ss_pred cEEEecCC-cccCC-cCcCccCCC-CCCeEEccCC--cCc-ccCCcccccCCcCCEEEcccCc-cccCCCCCcccccccc
Q 048430 470 LAVDFSLN-SLSGS-LPLNIGNLE-ALGGLNLTGN--QLS-GYIPSSIGNLKNLDWLALARNA-FQGPIPQSFGSLISLQ 542 (973)
Q Consensus 470 ~~L~ls~N-~l~~~-~p~~~~~l~-~L~~L~Ls~N--~l~-~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~ 542 (973)
+.|++++| .+++. ++..+..++ +|+.|+|++| .++ +.+|..+..+++|+.|+|++|. +++..+..+..+++|+
T Consensus 171 ~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~ 250 (336)
T 2ast_B 171 DELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQ 250 (336)
T ss_dssp CEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCC
T ss_pred CEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCC
Confidence 66666666 66643 566678888 9999999999 565 4677888899999999999999 7778888999999999
Q ss_pred cccccccccCCCCCc---cccccccccccccCCC
Q 048430 543 SLDLSGNNISGEIPK---SLEKLSRLVDFNVSFN 573 (973)
Q Consensus 543 ~L~Ls~N~l~~~~p~---~~~~l~~L~~l~ls~N 573 (973)
+|+|++|. +..+. .+.++++|+.|++++|
T Consensus 251 ~L~l~~~~--~~~~~~~~~l~~~~~L~~L~l~~~ 282 (336)
T 2ast_B 251 HLSLSRCY--DIIPETLLELGEIPTLKTLQVFGI 282 (336)
T ss_dssp EEECTTCT--TCCGGGGGGGGGCTTCCEEECTTS
T ss_pred EeeCCCCC--CCCHHHHHHHhcCCCCCEEeccCc
Confidence 99999996 23344 6889999999999998
No 348
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.87 E-value=5.5e-22 Score=216.36 Aligned_cols=196 Identities=25% Similarity=0.377 Sum_probs=173.0
Q ss_pred CCCCCcccEEEeecCccccccCcccCCCCCCCEEEccCCcCCCCCchhhhccCcCCeeecCCccccCcCcccccCcCCCC
Q 048430 367 FGNLSNLLVLSLVNNELAGAIPTVLGKLQKLQGLDLNSNKLKGFIPTDLCKLEKLNTLLSNNNALQGQIPTCLANLTSLR 446 (973)
Q Consensus 367 ~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~ 446 (973)
+..+++|++|++++|.+.. ++ .+..+++|++|+|++|++++..+ +..+++|+.|++++|.+++. ..+..+++|+
T Consensus 37 ~~~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~--~~~~~l~~L~ 110 (308)
T 1h6u_A 37 QADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV--SAIAGLQSIK 110 (308)
T ss_dssp HHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC--GGGTTCTTCC
T ss_pred HHHcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCc--hhhcCCCCCC
Confidence 3457899999999999984 45 68899999999999999996544 99999999999999999864 3689999999
Q ss_pred eeeccCCCCCCCCcccccccccccEEEecCCcccCCcCcCccCCCCCCeEEccCCcCcccCCcccccCCcCCEEEcccCc
Q 048430 447 HLDFRSNSLNSTIPSTFWSLKYILAVDFSLNSLSGSLPLNIGNLEALGGLNLTGNQLSGYIPSSIGNLKNLDWLALARNA 526 (973)
Q Consensus 447 ~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 526 (973)
+|++++|++++. + .+..+++|+.|++++|++++..+ ++.+++|+.|+|++|++++ ++. +..+++|+.|+|++|+
T Consensus 111 ~L~l~~n~l~~~-~-~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~ 184 (308)
T 1h6u_A 111 TLDLTSTQITDV-T-PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSD-LTP-LANLSKLTTLKADDNK 184 (308)
T ss_dssp EEECTTSCCCCC-G-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSC
T ss_pred EEECCCCCCCCc-h-hhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCC-Chh-hcCCCCCCEEECCCCc
Confidence 999999999874 3 38999999999999999996544 8899999999999999995 444 9999999999999999
Q ss_pred cccCCCCCcccccccccccccccccCCCCCccccccccccccccCCCccccc
Q 048430 527 FQGPIPQSFGSLISLQSLDLSGNNISGEIPKSLEKLSRLVDFNVSFNGLEGE 578 (973)
Q Consensus 527 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~ 578 (973)
+++..+ +..+++|++|+|++|++++..| +..+++|+.|++++|++++.
T Consensus 185 l~~~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~~~ 232 (308)
T 1h6u_A 185 ISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITNQ 232 (308)
T ss_dssp CCCCGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEECC
T ss_pred cCcChh--hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeeecC
Confidence 996554 8999999999999999996653 89999999999999999863
No 349
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.86 E-value=4e-21 Score=213.78 Aligned_cols=241 Identities=19% Similarity=0.187 Sum_probs=156.6
Q ss_pred cEEEccCCCCCCCCCccccCCCCCccEEEeeCcccCCCCCccccCCCCCCeEEccCccccccCCccccCCCCCccE-EEc
Q 048430 96 KIIDFSSNSLSGSLPGDMCNSFTQLESFDVSSNKITGEFPSAIVNISSLKSIRLDNNSLSGSFPTDLCTRLPSLVQ-LRL 174 (973)
Q Consensus 96 ~~L~Ls~n~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~-L~L 174 (973)
+.++.++++++ .||.++ .+++++|+|++|+|+...+.+|.++++|++|+|++|++.+.+|.++|.++++|++ +.+
T Consensus 12 ~~v~C~~~~Lt-~iP~~l---~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~ 87 (350)
T 4ay9_X 12 RVFLCQESKVT-EIPSDL---PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIE 87 (350)
T ss_dssp TEEEEESTTCC-SCCTTC---CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEE
T ss_pred CEEEecCCCCC-ccCcCc---CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcc
Confidence 45566666666 566554 3466777777777764434466777777777777777665667666677766654 455
Q ss_pred ccccccccCCCCCCCccccCCCCccEEEecCCcccCccccccccCCcceeEEeec-ccccccCCCCC-C-ccccceeeec
Q 048430 175 LGNNITGRIPNREIPNEIGNLHNLKILDLGGNNIAGLIPSMIFNNSNMVAILLYG-NHLSGHLPSSI-Y-LPNLENLFLW 251 (973)
Q Consensus 175 ~~N~l~~~~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~l~~-n~l~~~~~~~~-~-l~~L~~L~L~ 251 (973)
+.|+|+.. .|..|..+++|++|++++|+|++..+..+....++..+++.+ |++....+..+ . ...+++|+|+
T Consensus 88 ~~N~l~~l-----~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~ 162 (350)
T 4ay9_X 88 KANNLLYI-----NPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLN 162 (350)
T ss_dssp EETTCCEE-----CTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECC
T ss_pred cCCccccc-----CchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccc
Confidence 56666532 245667777777777777777766666666666666666654 34444433332 2 3468889999
Q ss_pred cccccccCcchhcccCcccEEEec-cccccccCCCcccccccceEEEccCCcCCCCCCCcchhhhhhhccCCcCcEEEcc
Q 048430 252 KNNLSGIIPDSICNASEATILELS-SNLFSGLVPNTFGNCRQLQILSLGDNQLTTGSSAQGQIFYSSLAKCRYLRVLVLD 330 (973)
Q Consensus 252 ~N~l~~~~~~~l~~l~~L~~L~L~-~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~L~~L~L~ 330 (973)
+|+|+.+.+..| ...+|+.|+++ +|.++.++++.|.++++|++|++++|+|+.++.. .+.+|+.|.+.
T Consensus 163 ~N~i~~i~~~~f-~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~----------~~~~L~~L~~l 231 (350)
T 4ay9_X 163 KNGIQEIHNSAF-NGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSY----------GLENLKKLRAR 231 (350)
T ss_dssp SSCCCEECTTSS-TTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSS----------SCTTCCEEECT
T ss_pred cccccCCChhhc-cccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChh----------hhccchHhhhc
Confidence 999986555444 55678899987 4777777778889999999999999999876543 13445555544
Q ss_pred CCCCCCCCCCcccccccccceeecccCCccccCCCCCCCCCcccEEEeecCc
Q 048430 331 TNPLKGVIPNSIGNLSTSLENFYAGSSQLSGGIPVGFGNLSNLLVLSLVNNE 382 (973)
Q Consensus 331 ~N~l~~~~p~~~~~l~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~ 382 (973)
++.-.. .+| .+..+++|+.++++++.
T Consensus 232 ~~~~l~-------------------------~lP-~l~~l~~L~~l~l~~~~ 257 (350)
T 4ay9_X 232 STYNLK-------------------------KLP-TLEKLVALMEASLTYPS 257 (350)
T ss_dssp TCTTCC-------------------------CCC-CTTTCCSCCEEECSCHH
T ss_pred cCCCcC-------------------------cCC-CchhCcChhhCcCCCCc
Confidence 432221 233 26677888888887654
No 350
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.86 E-value=2.8e-22 Score=234.26 Aligned_cols=210 Identities=25% Similarity=0.332 Sum_probs=155.4
Q ss_pred CCCcc-----eEEEE-EeeCCCCcEEEEecCCCCCCCcCCCCCCCCCCCcEEEecCCCCCCCCCcccccccCCcEEEccC
Q 048430 29 SASVC-----NWVGV-TCSIRHGRVAALSLPNLSLGGTLPPHVGNLSFLVSLNISGNSFYDTLPNELWHMRRLKIIDFSS 102 (973)
Q Consensus 29 ~~~~c-----~w~gv-~C~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~ 102 (973)
+.++| .|.|+ .|.. ++++.|+++++++++ +|+.+. ++|++|+|++|+|. .+| ..+++|++|+|++
T Consensus 39 ~~~~~~~~~~~~~~l~~C~~--~~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~ 109 (571)
T 3cvr_A 39 QALPGENRNEAVSLLKECLI--NQFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYLDACD 109 (571)
T ss_dssp TCCTTCCHHHHHHHHHHHHH--TTCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEEECCS
T ss_pred cCCccccccchhhhcccccc--CCccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEEEccC
Confidence 34556 79999 7864 479999999999987 888774 88999999999996 678 5578999999999
Q ss_pred CCCCCCCCccccCCCCCccEEEeeCcccCCCCCccccCCCCCCeEEccCccccccCCccccCCCCCccEEEccccccccc
Q 048430 103 NSLSGSLPGDMCNSFTQLESFDVSSNKITGEFPSAIVNISSLKSIRLDNNSLSGSFPTDLCTRLPSLVQLRLLGNNITGR 182 (973)
Q Consensus 103 n~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~ 182 (973)
|+|++ +|. + .. +|++|+|++|+|++ +|. .+++|+.|+|++|+|+ .+|. .+++|++|+|++|+|++
T Consensus 110 N~l~~-ip~-l-~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~-~lp~----~l~~L~~L~Ls~N~L~~- 174 (571)
T 3cvr_A 110 NRLST-LPE-L-PA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLT-MLPE----LPTSLEVLSVRNNQLTF- 174 (571)
T ss_dssp SCCSC-CCC-C-CT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCS-CCCC----CCTTCCEEECCSSCCSC-
T ss_pred CCCCC-cch-h-hc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccC-cCCC----cCCCcCEEECCCCCCCC-
Confidence 99985 887 4 33 89999999999996 676 6889999999999998 5776 47889999999999874
Q ss_pred CCCCCCCccccCCCCccEEEecCCcccCccccccccCCcceeEEeecccccccCCCCCCccccceeeeccccccccCcch
Q 048430 183 IPNREIPNEIGNLHNLKILDLGGNNIAGLIPSMIFNNSNMVAILLYGNHLSGHLPSSIYLPNLENLFLWKNNLSGIIPDS 262 (973)
Q Consensus 183 ~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 262 (973)
+|. |. ++|++|+|++|+|+ .+|. +.. +| ....+.|++|+|++|+|+ .+|..
T Consensus 175 -----lp~-l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L----------------~~~~~~L~~L~Ls~N~l~-~lp~~ 225 (571)
T 3cvr_A 175 -----LPE-LP--ESLEALDVSTNLLE-SLPA-VPV--RN----------------HHSEETEIFFRCRENRIT-HIPEN 225 (571)
T ss_dssp -----CCC-CC--TTCCEEECCSSCCS-SCCC-CC--------------------------CCEEEECCSSCCC-CCCGG
T ss_pred -----cch-hh--CCCCEEECcCCCCC-chhh-HHH--hh----------------hcccccceEEecCCCcce-ecCHH
Confidence 455 55 78999999999988 4454 432 33 000233466666666666 35555
Q ss_pred hcccCcccEEEeccccccccCCCcccccc
Q 048430 263 ICNASEATILELSSNLFSGLVPNTFGNCR 291 (973)
Q Consensus 263 l~~l~~L~~L~L~~N~i~~~~~~~~~~l~ 291 (973)
+..+++|+.|+|++|++++.+|..|..+.
T Consensus 226 l~~l~~L~~L~L~~N~l~~~~p~~l~~l~ 254 (571)
T 3cvr_A 226 ILSLDPTCTIILEDNPLSSRIRESLSQQT 254 (571)
T ss_dssp GGGSCTTEEEECCSSSCCHHHHHHHHHHH
T ss_pred HhcCCCCCEEEeeCCcCCCcCHHHHHHhh
Confidence 66666677777777776666666555543
No 351
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.85 E-value=1.1e-20 Score=193.71 Aligned_cols=181 Identities=23% Similarity=0.235 Sum_probs=118.7
Q ss_pred cEEEeecCccccccCcccCCCCCCCEEEccCCcCCCCCchhhhccCcCCeeecCCccccCcCcccccCcCCCCeeeccCC
Q 048430 374 LVLSLVNNELAGAIPTVLGKLQKLQGLDLNSNKLKGFIPTDLCKLEKLNTLLSNNNALQGQIPTCLANLTSLRHLDFRSN 453 (973)
Q Consensus 374 ~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N 453 (973)
+.++.+++.++ .+|..+ .++|++|+|++|++++..+..|..+++|++|++++|++++..+..|..+++|++|++++|
T Consensus 10 ~~v~c~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 86 (208)
T 2o6s_A 10 TTVECYSQGRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTN 86 (208)
T ss_dssp TEEECCSSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCcc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCC
Confidence 45666777776 344333 346777777777777655556667777777777777777665556667777777777777
Q ss_pred CCCCCCcccccccccccEEEecCCcccCCcCcCccCCCCCCeEEccCCcCcccCCcccccCCcCCEEEcccCccccCCCC
Q 048430 454 SLNSTIPSTFWSLKYILAVDFSLNSLSGSLPLNIGNLEALGGLNLTGNQLSGYIPSSIGNLKNLDWLALARNAFQGPIPQ 533 (973)
Q Consensus 454 ~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 533 (973)
++++..+..|..+++|+.|++++|++++..+..+..+++|+.|+|++|++++..+..|..+++|+.|+|++|.+.+.
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~--- 163 (208)
T 2o6s_A 87 QLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT--- 163 (208)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCC---
T ss_pred cCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecC---
Confidence 77765555566666677777777766655555566667777777777777655555566667777777777766532
Q ss_pred CcccccccccccccccccCCCCCcccccccc
Q 048430 534 SFGSLISLQSLDLSGNNISGEIPKSLEKLSR 564 (973)
Q Consensus 534 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 564 (973)
+++|+.|+++.|+++|.+|.+++.++.
T Consensus 164 ----~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 164 ----CPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp ----TTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred ----CCCHHHHHHHHHhCCceeeccCccccC
Confidence 335666666666666666666655543
No 352
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.84 E-value=1.5e-21 Score=209.31 Aligned_cols=150 Identities=15% Similarity=0.141 Sum_probs=118.8
Q ss_pred HHHHhcCCCCCccccccCceEEEEEEeCCCeEEEEEEEeccch------------------hhHHHHHHHHHHHHhccCC
Q 048430 675 LQQATNGFGESNLLGSGSFDNVYKATLANGVSVAVKVFNLQED------------------RALKSFDTECEVMRRIRHR 736 (973)
Q Consensus 675 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~------------------~~~~~~~~e~~~l~~l~h~ 736 (973)
+......|...+.||+|+||.||+|...+|+.||||+++.... .....+.+|+.++++++|
T Consensus 85 ~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~~- 163 (282)
T 1zar_A 85 LVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQG- 163 (282)
T ss_dssp HHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTT-
T ss_pred HHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhccC-
Confidence 3334455666799999999999999998899999999864321 134678999999999984
Q ss_pred ceeEEEeeeecCCeeEEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCC
Q 048430 737 NLIKIVSSCSNPGFKALIMQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDD 816 (973)
Q Consensus 737 niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~ 816 (973)
+++.+++.. +..++||||+++|+|.+ +.. .....++.|++.||.||| +.+|+||||||+|||++ +
T Consensus 164 --~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~-------~~~~~i~~qi~~~l~~lH---~~giiHrDlkp~NILl~-~ 228 (282)
T 1zar_A 164 --LAVPKVYAW-EGNAVLMELIDAKELYR-VRV-------ENPDEVLDMILEEVAKFY---HRGIVHGDLSQYNVLVS-E 228 (282)
T ss_dssp --SSSCCEEEE-ETTEEEEECCCCEEGGG-CCC-------SCHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEEE-T
T ss_pred --CCcCeEEec-cceEEEEEecCCCcHHH-cch-------hhHHHHHHHHHHHHHHHH---HCCCEeCCCCHHHEEEE-C
Confidence 555554433 45699999999999998 432 224579999999999999 89999999999999999 9
Q ss_pred CcEEEeecccccccCCCCCcccccccccccccCccCCC
Q 048430 817 MVAHLGDFGIAKLLDGVDPVTQTMTLATIGYMAPEYGS 854 (973)
Q Consensus 817 ~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~y~aPE~~~ 854 (973)
+.+||+|||+|+.. ..|+|||++.
T Consensus 229 ~~vkl~DFG~a~~~--------------~~~~a~e~l~ 252 (282)
T 1zar_A 229 EGIWIIDFPQSVEV--------------GEEGWREILE 252 (282)
T ss_dssp TEEEECCCTTCEET--------------TSTTHHHHHH
T ss_pred CcEEEEECCCCeEC--------------CCCCHHHHHH
Confidence 99999999998743 3467888653
No 353
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.83 E-value=2.8e-20 Score=217.37 Aligned_cols=189 Identities=22% Similarity=0.318 Sum_probs=112.4
Q ss_pred CCcEEEccCCCCCCCCCccccCCCCCccEEEeeCcccCCCCCccccCCCCCCeEEccCccccccCCccccCCCCCccEEE
Q 048430 94 RLKIIDFSSNSLSGSLPGDMCNSFTQLESFDVSSNKITGEFPSAIVNISSLKSIRLDNNSLSGSFPTDLCTRLPSLVQLR 173 (973)
Q Consensus 94 ~L~~L~Ls~n~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~ 173 (973)
+|+.|+|++|.+++ +|..+ +++|++|+|++|+|+ .+| ..+++|++|+|++|+|+ .+|. + .. +|++|+
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l---~~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~-~ip~-l-~~--~L~~L~ 126 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNL---PPQITVLEITQNALI-SLP---ELPASLEYLDACDNRLS-TLPE-L-PA--SLKHLD 126 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCC---CTTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCS-CCCC-C-CT--TCCEEE
T ss_pred CccEEEeCCCCCCc-cCHhH---cCCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCC-Ccch-h-hc--CCCEEE
Confidence 55555555555552 55443 245555555555555 344 23455555555555555 2554 2 11 555555
Q ss_pred cccccccccCCCCCCCccccCCCCccEEEecCCcccCccccccccCCcceeEEeecccccccCCCCCCccccceeeeccc
Q 048430 174 LLGNNITGRIPNREIPNEIGNLHNLKILDLGGNNIAGLIPSMIFNNSNMVAILLYGNHLSGHLPSSIYLPNLENLFLWKN 253 (973)
Q Consensus 174 L~~N~l~~~~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L~~N 253 (973)
|++|+|++ +|. .+++|++|+|++|+|++ +|. .+++|+.|++++|++++ +|. +. ++|++|+|++|
T Consensus 127 Ls~N~l~~------lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~-~~L~~L~Ls~N 190 (571)
T 3cvr_A 127 VDNNQLTM------LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP-ESLEALDVSTN 190 (571)
T ss_dssp CCSSCCSC------CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC-TTCCEEECCSS
T ss_pred CCCCcCCC------CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh-CCCCEEECcCC
Confidence 55555542 233 34555666666666554 333 34556666666666655 333 22 78888888888
Q ss_pred cccccCcchhcccCcc-------cEEEeccccccccCCCcccccccceEEEccCCcCCCCCCCcchhhhhhhccCCc
Q 048430 254 NLSGIIPDSICNASEA-------TILELSSNLFSGLVPNTFGNCRQLQILSLGDNQLTTGSSAQGQIFYSSLAKCRY 323 (973)
Q Consensus 254 ~l~~~~~~~l~~l~~L-------~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~ 323 (973)
+|+ .+|. +.. +| +.|+|++|+|+.+ |..+..+++|+.|+|++|++++ ..+..+..++.
T Consensus 191 ~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~~l-p~~l~~l~~L~~L~L~~N~l~~-------~~p~~l~~l~~ 255 (571)
T 3cvr_A 191 LLE-SLPA-VPV--RNHHSEETEIFFRCRENRITHI-PENILSLDPTCTIILEDNPLSS-------RIRESLSQQTA 255 (571)
T ss_dssp CCS-SCCC-CC----------CCEEEECCSSCCCCC-CGGGGGSCTTEEEECCSSSCCH-------HHHHHHHHHHH
T ss_pred CCC-chhh-HHH--hhhcccccceEEecCCCcceec-CHHHhcCCCCCEEEeeCCcCCC-------cCHHHHHHhhc
Confidence 888 4555 544 66 9999999999965 6667779999999999999985 34555555444
No 354
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.83 E-value=6e-20 Score=190.86 Aligned_cols=163 Identities=23% Similarity=0.288 Sum_probs=122.8
Q ss_pred CCCCCCcceEEEEEeeCCCCcEEEEecCCCCCCCcCCCCCCCCCCCcEEEecCCCCCCCCCcccccccCCcEEEccCCCC
Q 048430 26 TNTSASVCNWVGVTCSIRHGRVAALSLPNLSLGGTLPPHVGNLSFLVSLNISGNSFYDTLPNELWHMRRLKIIDFSSNSL 105 (973)
Q Consensus 26 ~~~~~~~c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l 105 (973)
|+.+.+.|+|.+|.|+.. +++ .+|..+. ++|++|+|++|++.+..|..|..+++|++|+|++|++
T Consensus 12 ~~~~~~~Cs~~~v~c~~~------------~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l 76 (229)
T 3e6j_A 12 ACPSQCSCSGTTVDCRSK------------RHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQL 76 (229)
T ss_dssp CCCTTCEEETTEEECTTS------------CCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred cCCCCCEEeCCEeEccCC------------CcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCC
Confidence 445788999999999642 232 5665443 7889999999999888888899999999999999998
Q ss_pred CCCCCccccCCCCCccEEEeeCcccCCCCCccccCCCCCCeEEccCccccccCCccccCCCCCccEEEcccccccccCCC
Q 048430 106 SGSLPGDMCNSFTQLESFDVSSNKITGEFPSAIVNISSLKSIRLDNNSLSGSFPTDLCTRLPSLVQLRLLGNNITGRIPN 185 (973)
Q Consensus 106 ~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~ 185 (973)
. .+|...|..+++|++|+|++|+|++..+..|..+++|++|+|++|+|+ .+|..+ ..+++|++|+|++|+|++.
T Consensus 77 ~-~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~-~~l~~L~~L~L~~N~l~~~--- 150 (229)
T 3e6j_A 77 G-ALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGI-ERLTHLTHLALDQNQLKSI--- 150 (229)
T ss_dssp C-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTG-GGCTTCSEEECCSSCCCCC---
T ss_pred C-CcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCccc-ccCCCCCEEECCCCcCCcc---
Confidence 6 777777788888888888888888766666788888888888888887 677655 5667777777777777632
Q ss_pred CCCCccccCCCCccEEEecCCcccCc
Q 048430 186 REIPNEIGNLHNLKILDLGGNNIAGL 211 (973)
Q Consensus 186 ~~~p~~l~~l~~L~~L~L~~N~l~~~ 211 (973)
.+..|..+++|++|+|++|.+...
T Consensus 151 --~~~~~~~l~~L~~L~l~~N~~~c~ 174 (229)
T 3e6j_A 151 --PHGAFDRLSSLTHAYLFGNPWDCE 174 (229)
T ss_dssp --CTTTTTTCTTCCEEECTTSCBCTT
T ss_pred --CHHHHhCCCCCCEEEeeCCCccCC
Confidence 123466667777777777766643
No 355
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.81 E-value=6.1e-21 Score=231.70 Aligned_cols=205 Identities=20% Similarity=0.238 Sum_probs=116.2
Q ss_pred CCCcceEEEEEeeCCCCcEEEEecCCCCCCCcCCCCCCCCCCCcE-----EEecCCCCCCCCCcccccccCCcEEEccCC
Q 048430 29 SASVCNWVGVTCSIRHGRVAALSLPNLSLGGTLPPHVGNLSFLVS-----LNISGNSFYDTLPNELWHMRRLKIIDFSSN 103 (973)
Q Consensus 29 ~~~~c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~-----L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n 103 (973)
.+..+.|.+++++. .+++.|+|.++++.+ ++..+.....|.. ++++.|.+. ..|..+..++.|+.|+|++|
T Consensus 159 ~~~~~~~~~~~~s~--~~~~~l~L~~n~~~~-~~~~~l~~l~Ls~~~i~~~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n 234 (727)
T 4b8c_D 159 STPSGTATNSAVST--PLTPKIELFANGKDE-ANQALLQHKKLSQYSIDEDDDIENRMV-MPKDSKYDDQLWHALDLSNL 234 (727)
T ss_dssp -------------------------------------------------------------------CCCCCCEEECTTS
T ss_pred CCccccCCCceecC--CccceEEeeCCCCCc-chhhHhhcCccCcccccCcccccccee-cChhhhccCCCCcEEECCCC
Confidence 45667899999964 789999999999886 3444332222222 223334442 45788999999999999999
Q ss_pred CCCCCCCccccCCCCCccEEEeeCcccCCCCCccccCCCCCCeEEccCccccccCCccccCCCCCccEEEcccccccccC
Q 048430 104 SLSGSLPGDMCNSFTQLESFDVSSNKITGEFPSAIVNISSLKSIRLDNNSLSGSFPTDLCTRLPSLVQLRLLGNNITGRI 183 (973)
Q Consensus 104 ~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~ 183 (973)
.+. .+|..++ .+++|++|+|++|.|+ .+|..|++|++|+.|+|++|+|+ .+|..+ ..+++|++|+|++|.|+
T Consensus 235 ~l~-~l~~~~~-~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~-~~l~~L~~L~L~~N~l~--- 306 (727)
T 4b8c_D 235 QIF-NISANIF-KYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAEL-GSCFQLKYFYFFDNMVT--- 306 (727)
T ss_dssp CCS-CCCGGGG-GCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSG-GGGTTCSEEECCSSCCC---
T ss_pred CCC-CCChhhc-CCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhh-cCCCCCCEEECCCCCCC---
Confidence 998 8998886 7999999999999999 88999999999999999999998 888775 67999999999999996
Q ss_pred CCCCCCccccCCCCccEEEecCCcccCccccccccCCc-ceeEEeecccccccCCCCCCccccceeeeccc
Q 048430 184 PNREIPNEIGNLHNLKILDLGGNNIAGLIPSMIFNNSN-MVAILLYGNHLSGHLPSSIYLPNLENLFLWKN 253 (973)
Q Consensus 184 ~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~-L~~L~l~~n~l~~~~~~~~~l~~L~~L~L~~N 253 (973)
.+|..|+++++|++|+|++|.|++.+|..+..+.. +..++|++|.+++.+| ..|+.|++++|
T Consensus 307 ---~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p-----~~l~~l~l~~n 369 (727)
T 4b8c_D 307 ---TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLP-----HERRFIEINTD 369 (727)
T ss_dssp ---CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCC-----CC---------
T ss_pred ---ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCc-----cccceeEeecc
Confidence 67888999999999999999999988888766422 2235666666666554 34555556555
No 356
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.81 E-value=4.1e-20 Score=190.72 Aligned_cols=136 Identities=21% Similarity=0.224 Sum_probs=74.5
Q ss_pred CCeeeccCCCCCCCCc-ccccccccccEEEecCCcccCCcCcCccCCCCCCeEEccCCcCcccCCcccccCCcCCEEEcc
Q 048430 445 LRHLDFRSNSLNSTIP-STFWSLKYILAVDFSLNSLSGSLPLNIGNLEALGGLNLTGNQLSGYIPSSIGNLKNLDWLALA 523 (973)
Q Consensus 445 L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 523 (973)
+++|+|++|++++..+ ..|..+++|+.|++++|+|++..+..|.++++|+.|+|++|+|++..+..|..+++|++|+|+
T Consensus 34 ~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 113 (220)
T 2v70_A 34 TAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLR 113 (220)
T ss_dssp CSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECT
T ss_pred CCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECC
Confidence 3444444444443322 234445555555555555554444455555555555555555555445555555666666666
Q ss_pred cCccccCCCCCcccccccccccccccccCCCCCccccccccccccccCCCcccccCC
Q 048430 524 RNAFQGPIPQSFGSLISLQSLDLSGNNISGEIPKSLEKLSRLVDFNVSFNGLEGEIP 580 (973)
Q Consensus 524 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p 580 (973)
+|+|++..|..|..+++|++|+|++|+|++..|..|..+++|+.|++++|++++..+
T Consensus 114 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 114 SNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp TSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred CCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 666655555556666666666666666665555556666666666666666655443
No 357
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.79 E-value=1.6e-19 Score=201.65 Aligned_cols=177 Identities=24% Similarity=0.228 Sum_probs=133.3
Q ss_pred cEEEeecCccccccCcccCCCCCCCEEEccCCcCCCCCchhhh-ccCcCCeeecCCccccCcCcccccCcCCCCeeeccC
Q 048430 374 LVLSLVNNELAGAIPTVLGKLQKLQGLDLNSNKLKGFIPTDLC-KLEKLNTLLSNNNALQGQIPTCLANLTSLRHLDFRS 452 (973)
Q Consensus 374 ~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~-~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~ 452 (973)
+.+++++++++ .+|..+. +.++.|+|++|+|++..+..+. ++++|+.|+|++|+|++..+..|.++++|++|+|++
T Consensus 21 ~~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 68899999888 5665554 3588899999998877777776 888888888888888877777888888888888888
Q ss_pred CCCCCCCcccccccccccEEEecCCcccCCcCcCccCCCCCCeEEccCCcCcccCCccc---ccCCcCCEEEcccCcccc
Q 048430 453 NSLNSTIPSTFWSLKYILAVDFSLNSLSGSLPLNIGNLEALGGLNLTGNQLSGYIPSSI---GNLKNLDWLALARNAFQG 529 (973)
Q Consensus 453 N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~---~~l~~L~~L~Ls~N~l~~ 529 (973)
|+|++..+..|..+++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..+..| ..+++|+.|+|++|+|++
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 177 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKK 177 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCC
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCc
Confidence 88887767777788888888888888877667777778888888888888874333334 457777777777777775
Q ss_pred CCCCCcccccc--cccccccccccCC
Q 048430 530 PIPQSFGSLIS--LQSLDLSGNNISG 553 (973)
Q Consensus 530 ~~p~~~~~l~~--L~~L~Ls~N~l~~ 553 (973)
..+..|..++. |+.|+|++|.+..
T Consensus 178 l~~~~~~~l~~~~l~~l~l~~N~~~C 203 (361)
T 2xot_A 178 LPLTDLQKLPAWVKNGLYLHNNPLEC 203 (361)
T ss_dssp CCHHHHHHSCHHHHTTEECCSSCEEC
T ss_pred cCHHHhhhccHhhcceEEecCCCccC
Confidence 55566666665 3677777777764
No 358
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.79 E-value=3.7e-19 Score=183.55 Aligned_cols=152 Identities=22% Similarity=0.301 Sum_probs=80.1
Q ss_pred CEEEccCCcCCCCCchhhhccCcCCeeecCCccccCcCcccccCcCCCCeeeccCCCCCCCCcccccccccccEEEecCC
Q 048430 398 QGLDLNSNKLKGFIPTDLCKLEKLNTLLSNNNALQGQIPTCLANLTSLRHLDFRSNSLNSTIPSTFWSLKYILAVDFSLN 477 (973)
Q Consensus 398 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N 477 (973)
+.+++++|.++ .+|..+. ++|+.|++++|.|++..+..|..+++|++|+|++|++++..|..|.++++|+.|++++|
T Consensus 14 ~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 45666666666 3444332 45566666666665555555555555555555555555554555555555555555555
Q ss_pred cccCCcCcCccCCCCCCeEEccCCcCcccCCcccccCCcCCEEEcccCccccCCCCCcccccccccccccccccC
Q 048430 478 SLSGSLPLNIGNLEALGGLNLTGNQLSGYIPSSIGNLKNLDWLALARNAFQGPIPQSFGSLISLQSLDLSGNNIS 552 (973)
Q Consensus 478 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 552 (973)
+|+...+..|.++++|+.|+|++|+|++..|..|..+++|+.|+|++|+|++..+..|..+++|++|+|++|.+.
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFI 165 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEE
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcC
Confidence 555333333444555555555555555444444555555555555555555444444444555555555555444
No 359
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.79 E-value=4.4e-19 Score=191.54 Aligned_cols=172 Identities=23% Similarity=0.357 Sum_probs=119.0
Q ss_pred CCCCcccEEEeecCccccccCcccCCCCCCCEEEccCCcCCCCCchhhhccCcCCeeecCCccccCcCcccccCcCCCCe
Q 048430 368 GNLSNLLVLSLVNNELAGAIPTVLGKLQKLQGLDLNSNKLKGFIPTDLCKLEKLNTLLSNNNALQGQIPTCLANLTSLRH 447 (973)
Q Consensus 368 ~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~ 447 (973)
..+++|+.|++++|.+... + .+..+++|++|+|++|++++..+ +..+++|+.|++++|.+++. ..+..+++|++
T Consensus 43 ~~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~ 116 (291)
T 1h6t_A 43 NELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKDL--SSLKDLKKLKS 116 (291)
T ss_dssp HHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCG--GGGTTCTTCCE
T ss_pred hhcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCCC--hhhccCCCCCE
Confidence 3466778888888877743 3 36777888888888888875433 77777788888888877752 23777777777
Q ss_pred eeccCCCCCCCCcccccccccccEEEecCCcccCCcCcCccCCCCCCeEEccCCcCcccCCcccccCCcCCEEEcccCcc
Q 048430 448 LDFRSNSLNSTIPSTFWSLKYILAVDFSLNSLSGSLPLNIGNLEALGGLNLTGNQLSGYIPSSIGNLKNLDWLALARNAF 527 (973)
Q Consensus 448 L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 527 (973)
|++++|++++. ..+..+++|+.|++++|++++. ..++.+++|+.|+|++|++++..| +..+++|+.|+|++|++
T Consensus 117 L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i 190 (291)
T 1h6t_A 117 LSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHI 190 (291)
T ss_dssp EECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCC
T ss_pred EECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcC
Confidence 77777777653 3566677777777777777643 456677777777777777764433 66777777777777777
Q ss_pred ccCCCCCcccccccccccccccccCC
Q 048430 528 QGPIPQSFGSLISLQSLDLSGNNISG 553 (973)
Q Consensus 528 ~~~~p~~~~~l~~L~~L~Ls~N~l~~ 553 (973)
++ +| .+..+++|+.|+|++|+++.
T Consensus 191 ~~-l~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 191 SD-LR-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp CB-CG-GGTTCTTCSEEEEEEEEEEC
T ss_pred CC-Ch-hhccCCCCCEEECcCCcccC
Confidence 64 33 36667777777777777764
No 360
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.79 E-value=5.1e-19 Score=191.04 Aligned_cols=172 Identities=25% Similarity=0.363 Sum_probs=88.0
Q ss_pred ccccCCcEEEccCCCCCCCCCccccCCCCCccEEEeeCcccCCCCCccccCCCCCCeEEccCccccccCCccccCCCCCc
Q 048430 90 WHMRRLKIIDFSSNSLSGSLPGDMCNSFTQLESFDVSSNKITGEFPSAIVNISSLKSIRLDNNSLSGSFPTDLCTRLPSL 169 (973)
Q Consensus 90 ~~l~~L~~L~Ls~n~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L 169 (973)
..+++|+.|++++|.+. .+|. +..+++|++|+|++|++++..| +.++++|++|+|++|+++ .+|. +..+++|
T Consensus 43 ~~l~~L~~L~l~~~~i~-~~~~--~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~-~~~~--l~~l~~L 114 (291)
T 1h6t_A 43 NELNSIDQIIANNSDIK-SVQG--IQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVK-DLSS--LKDLKKL 114 (291)
T ss_dssp HHHHTCCEEECTTSCCC-CCTT--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC-CGGG--GTTCTTC
T ss_pred hhcCcccEEEccCCCcc-cChh--HhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCC-CChh--hccCCCC
Confidence 45555555555555554 3432 3445555555555555554322 555555555555555555 3332 3455555
Q ss_pred cEEEcccccccccCCCCCCCccccCCCCccEEEecCCcccCccccccccCCcceeEEeecccccccCCCCCCccccceee
Q 048430 170 VQLRLLGNNITGRIPNREIPNEIGNLHNLKILDLGGNNIAGLIPSMIFNNSNMVAILLYGNHLSGHLPSSIYLPNLENLF 249 (973)
Q Consensus 170 ~~L~L~~N~l~~~~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~ 249 (973)
++|+|++|+|++ + ..+..+++|++|++++|++++. ..+..+++|+.|++++|++++..+ ...+++|++|+
T Consensus 115 ~~L~L~~n~i~~------~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~-l~~l~~L~~L~ 184 (291)
T 1h6t_A 115 KSLSLEHNGISD------I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP-LAGLTKLQNLY 184 (291)
T ss_dssp CEEECTTSCCCC------C-GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG-GTTCTTCCEEE
T ss_pred CEEECCCCcCCC------C-hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh-hcCCCccCEEE
Confidence 566666555542 2 2455556666666666666543 334444444444444443333222 22355555555
Q ss_pred eccccccccCcchhcccCcccEEEeccccccc
Q 048430 250 LWKNNLSGIIPDSICNASEATILELSSNLFSG 281 (973)
Q Consensus 250 L~~N~l~~~~~~~l~~l~~L~~L~L~~N~i~~ 281 (973)
+++|++++. + .+..+++|+.|++++|+++.
T Consensus 185 L~~N~i~~l-~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 185 LSKNHISDL-R-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp CCSSCCCBC-G-GGTTCTTCSEEEEEEEEEEC
T ss_pred CCCCcCCCC-h-hhccCCCCCEEECcCCcccC
Confidence 555555542 2 25555556666666655554
No 361
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.78 E-value=1.7e-19 Score=213.41 Aligned_cols=178 Identities=25% Similarity=0.336 Sum_probs=83.1
Q ss_pred ccccCCcEEEccCCCCCCCCCccccCCCCCccEEEeeCcccCCCCCccccCCCCCCeEEccCccccccCCccccCCCCCc
Q 048430 90 WHMRRLKIIDFSSNSLSGSLPGDMCNSFTQLESFDVSSNKITGEFPSAIVNISSLKSIRLDNNSLSGSFPTDLCTRLPSL 169 (973)
Q Consensus 90 ~~l~~L~~L~Ls~n~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L 169 (973)
..|++|+.|+|++|.+. .+|. +..+++|+.|+|++|++++..| +..+++|+.|+|++|.|+ .+| .+..+++|
T Consensus 40 ~~L~~L~~L~l~~n~i~-~l~~--l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~-~l~--~l~~l~~L 111 (605)
T 1m9s_A 40 NELNSIDQIIANNSDIK-SVQG--IQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIK-DLS--SLKDLKKL 111 (605)
T ss_dssp HHHTTCCCCBCTTCCCC-CCTT--GGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCC-CCT--TSTTCTTC
T ss_pred hcCCCCCEEECcCCCCC-CChH--HccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCC-CCh--hhccCCCC
Confidence 34444444444444444 3332 2344444444444444443222 444444444444444444 232 12344445
Q ss_pred cEEEcccccccccCCCCCCCccccCCCCccEEEecCCcccCccccccccCCcceeEEeecccccccCCCCCCccccceee
Q 048430 170 VQLRLLGNNITGRIPNREIPNEIGNLHNLKILDLGGNNIAGLIPSMIFNNSNMVAILLYGNHLSGHLPSSIYLPNLENLF 249 (973)
Q Consensus 170 ~~L~L~~N~l~~~~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~ 249 (973)
++|+|++|+|++ + ..+..+++|+.|+|++|+|++. ..+..+++|+.|+|++|.+++..| ...+++|++|+
T Consensus 112 ~~L~Ls~N~l~~------l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~-l~~l~~L~~L~ 181 (605)
T 1m9s_A 112 KSLSLEHNGISD------I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP-LAGLTKLQNLY 181 (605)
T ss_dssp CEEECTTSCCCC------C-GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG-GTTCTTCCEEE
T ss_pred CEEEecCCCCCC------C-ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh-hccCCCCCEEE
Confidence 555555554431 1 2344455555555555555433 233343333333333333333322 22356666666
Q ss_pred eccccccccCcchhcccCcccEEEeccccccccCCCcc
Q 048430 250 LWKNNLSGIIPDSICNASEATILELSSNLFSGLVPNTF 287 (973)
Q Consensus 250 L~~N~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~ 287 (973)
|++|+|+++ ..+..+++|+.|+|++|++.+.+...+
T Consensus 182 Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~p~~~~ 217 (605)
T 1m9s_A 182 LSKNHISDL--RALAGLKNLDVLELFSQECLNKPINHQ 217 (605)
T ss_dssp CCSSCCCBC--GGGTTCTTCSEEECCSEEEECCCCCCC
T ss_pred CcCCCCCCC--hHHccCCCCCEEEccCCcCcCCccccc
Confidence 666666643 245666666666666666665444333
No 362
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.78 E-value=6.7e-19 Score=181.61 Aligned_cols=157 Identities=24% Similarity=0.277 Sum_probs=93.1
Q ss_pred cEEEeecCccccccCcccCCCCCCCEEEccCCcCCCCCchhhhccCcCCeeecCCccccCcCcccccCcCCCCeeeccCC
Q 048430 374 LVLSLVNNELAGAIPTVLGKLQKLQGLDLNSNKLKGFIPTDLCKLEKLNTLLSNNNALQGQIPTCLANLTSLRHLDFRSN 453 (973)
Q Consensus 374 ~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N 453 (973)
+.+++++|.++ .+|..+. ..+++|+|++|++++..+. ..|..+++|++|+|++|
T Consensus 14 ~~l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~-----------------------~~~~~l~~L~~L~L~~N 67 (220)
T 2v70_A 14 TTVDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEAT-----------------------GIFKKLPQLRKINFSNN 67 (220)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECCC-----------------------CCGGGCTTCCEEECCSS
T ss_pred CEeEeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCch-----------------------hhhccCCCCCEEECCCC
Confidence 46666666666 3444332 2345666666666644332 22344444555555555
Q ss_pred CCCCCCcccccccccccEEEecCCcccCCcCcCccCCCCCCeEEccCCcCcccCCcccccCCcCCEEEcccCccccCCCC
Q 048430 454 SLNSTIPSTFWSLKYILAVDFSLNSLSGSLPLNIGNLEALGGLNLTGNQLSGYIPSSIGNLKNLDWLALARNAFQGPIPQ 533 (973)
Q Consensus 454 ~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 533 (973)
+|++..+..|..+++|+.|++++|++++..+..|.++++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..|.
T Consensus 68 ~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 147 (220)
T 2v70_A 68 KITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPG 147 (220)
T ss_dssp CCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTT
T ss_pred cCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHH
Confidence 55444444555555555555555555545555566666666666666666666666667777777777777777766677
Q ss_pred CcccccccccccccccccCCCCC
Q 048430 534 SFGSLISLQSLDLSGNNISGEIP 556 (973)
Q Consensus 534 ~~~~l~~L~~L~Ls~N~l~~~~p 556 (973)
.|..+++|+.|+|++|.+++..+
T Consensus 148 ~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 148 AFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp TTTTCTTCCEEECCSCCEECSGG
T ss_pred HhcCCCCCCEEEecCcCCcCCCc
Confidence 77777777777777777765443
No 363
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.78 E-value=1.3e-18 Score=180.87 Aligned_cols=153 Identities=25% Similarity=0.283 Sum_probs=83.5
Q ss_pred CCEEEccCCcCCCCCchhhhccCcCCeeecCCccccCcCcccccCcCCCCeeeccCCCCCCCCcccccccccccEEEecC
Q 048430 397 LQGLDLNSNKLKGFIPTDLCKLEKLNTLLSNNNALQGQIPTCLANLTSLRHLDFRSNSLNSTIPSTFWSLKYILAVDFSL 476 (973)
Q Consensus 397 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~ 476 (973)
-+.++.+++.++ .+|..+. ++|+.|++++|.+++..+..|.++++|++|+|++|+|.+..+..|..+++|+.|++++
T Consensus 21 ~~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~ 97 (229)
T 3e6j_A 21 GTTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGT 97 (229)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCC
Confidence 345666666666 4444332 5566666666666655555566666666666666666544444455555555555555
Q ss_pred CcccCCcCcCccCCCCCCeEEccCCcCcccCCcccccCCcCCEEEcccCccccCCCCCcccccccccccccccccCC
Q 048430 477 NSLSGSLPLNIGNLEALGGLNLTGNQLSGYIPSSIGNLKNLDWLALARNAFQGPIPQSFGSLISLQSLDLSGNNISG 553 (973)
Q Consensus 477 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 553 (973)
|+|++..+..|..+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|+|++..+..|..+++|+.|+|++|.+++
T Consensus 98 N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 173 (229)
T 3e6j_A 98 NQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDC 173 (229)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCT
T ss_pred CcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccC
Confidence 5555444444455555555555555555 445555555555555555555554444445555555555555555543
No 364
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.78 E-value=9.8e-19 Score=180.36 Aligned_cols=152 Identities=22% Similarity=0.278 Sum_probs=91.3
Q ss_pred cEEEeecCccccccCcccCCCCCCCEEEccCCcCCCCCchhhhccCcCCeeecCCccccCcCcccccCcCCCCeeeccCC
Q 048430 374 LVLSLVNNELAGAIPTVLGKLQKLQGLDLNSNKLKGFIPTDLCKLEKLNTLLSNNNALQGQIPTCLANLTSLRHLDFRSN 453 (973)
Q Consensus 374 ~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N 453 (973)
+.+++++++++ .+|..+. ++|++|+|++|+|++..+..|..+++|+.|+|++|++++..|..|.++++|++|+|++|
T Consensus 14 ~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 45566666665 3444333 45666666666666555555666666666666666666555666666666666666666
Q ss_pred CCCCCCcccccccccccEEEecCCcccCCcCcCccCCCCCCeEEccCCcCcccCCcccccCCcCCEEEcccCccc
Q 048430 454 SLNSTIPSTFWSLKYILAVDFSLNSLSGSLPLNIGNLEALGGLNLTGNQLSGYIPSSIGNLKNLDWLALARNAFQ 528 (973)
Q Consensus 454 ~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 528 (973)
+|++..+..|..+++|+.|++++|+|++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|.+.
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFI 165 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEE
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcC
Confidence 666555555566666666666666666555556666666666666666666555555666666666666666665
No 365
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.77 E-value=4.5e-19 Score=197.99 Aligned_cols=175 Identities=21% Similarity=0.194 Sum_probs=85.0
Q ss_pred eeecccCCccccCCCCCCCCCcccEEEeecCccccccCcccC-CCCCCCEEEccCCcCCCCCchhhhccCcCCeeecCCc
Q 048430 351 NFYAGSSQLSGGIPVGFGNLSNLLVLSLVNNELAGAIPTVLG-KLQKLQGLDLNSNKLKGFIPTDLCKLEKLNTLLSNNN 429 (973)
Q Consensus 351 ~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N 429 (973)
.++..++.++. +|..+. ..++.|+|++|++++..+..|. .+++|++|+|++|+|++..+..|.++++|+.|+|++|
T Consensus 22 ~l~c~~~~l~~-iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 98 (361)
T 2xot_A 22 ILSCSKQQLPN-VPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSN 98 (361)
T ss_dssp EEECCSSCCSS-CCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EEEeCCCCcCc-cCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCC
Confidence 44444444442 333332 2345555555555544444444 5555555555555555444444555555555555555
Q ss_pred cccCcCcccccCcCCCCeeeccCCCCCCCCcccccccccccEEEecCCcccCCcCcCc---cCCCCCCeEEccCCcCccc
Q 048430 430 ALQGQIPTCLANLTSLRHLDFRSNSLNSTIPSTFWSLKYILAVDFSLNSLSGSLPLNI---GNLEALGGLNLTGNQLSGY 506 (973)
Q Consensus 430 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~---~~l~~L~~L~Ls~N~l~~~ 506 (973)
+++...+..|..+++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..+..| ..+++|+.|+|++|+|++.
T Consensus 99 ~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~l 178 (361)
T 2xot_A 99 HLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKL 178 (361)
T ss_dssp CCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCCC
T ss_pred cCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCcc
Confidence 5554444445555555555555555554445555555555555555555553222222 3445555555555555533
Q ss_pred CCcccccCCc--CCEEEcccCccc
Q 048430 507 IPSSIGNLKN--LDWLALARNAFQ 528 (973)
Q Consensus 507 ~p~~~~~l~~--L~~L~Ls~N~l~ 528 (973)
.+..+..++. |+.|+|++|.+.
T Consensus 179 ~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 179 PLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp CHHHHHHSCHHHHTTEECCSSCEE
T ss_pred CHHHhhhccHhhcceEEecCCCcc
Confidence 3344444444 244555555554
No 366
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.77 E-value=7.1e-19 Score=208.09 Aligned_cols=186 Identities=22% Similarity=0.308 Sum_probs=133.7
Q ss_pred CCCCCcccEEEeecCccccccCcccCCCCCCCEEEccCCcCCCCCchhhhccCcCCeeecCCccccCcCcccccCcCCCC
Q 048430 367 FGNLSNLLVLSLVNNELAGAIPTVLGKLQKLQGLDLNSNKLKGFIPTDLCKLEKLNTLLSNNNALQGQIPTCLANLTSLR 446 (973)
Q Consensus 367 ~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~ 446 (973)
+..+++|+.|++++|.+.. ++ .+..+++|+.|+|++|++.+..+ +..+++|+.|+|++|.+.+. ..+..+++|+
T Consensus 39 ~~~L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~ 112 (605)
T 1m9s_A 39 QNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKDL--SSLKDLKKLK 112 (605)
T ss_dssp HHHHTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCC--TTSTTCTTCC
T ss_pred hhcCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCCC--hhhccCCCCC
Confidence 3456677778888888773 33 47777888888888888875544 77788888888888887752 2577778888
Q ss_pred eeeccCCCCCCCCcccccccccccEEEecCCcccCCcCcCccCCCCCCeEEccCCcCcccCCcccccCCcCCEEEcccCc
Q 048430 447 HLDFRSNSLNSTIPSTFWSLKYILAVDFSLNSLSGSLPLNIGNLEALGGLNLTGNQLSGYIPSSIGNLKNLDWLALARNA 526 (973)
Q Consensus 447 ~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 526 (973)
.|+|++|++.+. ..+..+++|+.|+|++|++++. ..+..+++|+.|+|++|+|++..| +..+++|+.|+|++|+
T Consensus 113 ~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~ 186 (605)
T 1m9s_A 113 SLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNH 186 (605)
T ss_dssp EEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSC
T ss_pred EEEecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCC
Confidence 888888887753 3577778888888888888754 457777888888888888876555 7778888888888888
Q ss_pred cccCCCCCcccccccccccccccccCCCCCcccccccccc
Q 048430 527 FQGPIPQSFGSLISLQSLDLSGNNISGEIPKSLEKLSRLV 566 (973)
Q Consensus 527 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 566 (973)
|++. | .+..+++|+.|+|++|++++.....+..+..+.
T Consensus 187 i~~l-~-~l~~l~~L~~L~L~~N~l~~~p~~~~~~l~~~~ 224 (605)
T 1m9s_A 187 ISDL-R-ALAGLKNLDVLELFSQECLNKPINHQSNLVVPN 224 (605)
T ss_dssp CCBC-G-GGTTCTTCSEEECCSEEEECCCCCCCSSCEEEC
T ss_pred CCCC-h-HHccCCCCCEEEccCCcCcCCcccccccEEecc
Confidence 8753 3 577788888888888888765444444443333
No 367
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.75 E-value=1.9e-20 Score=220.33 Aligned_cols=191 Identities=21% Similarity=0.200 Sum_probs=119.0
Q ss_pred CCCCcccEEEeecCccccccCcccCCCCCCCEEEccCCc-------------CCCCCchhhhccCcCCeee-cCCccccC
Q 048430 368 GNLSNLLVLSLVNNELAGAIPTVLGKLQKLQGLDLNSNK-------------LKGFIPTDLCKLEKLNTLL-SNNNALQG 433 (973)
Q Consensus 368 ~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~-------------l~~~~~~~~~~l~~L~~L~-l~~N~l~~ 433 (973)
..+++|+.|+|++|+++ .+|..++.+++|+.|++++|. +.+.+|..+..+++|+.|+ ++.|.+.
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~- 423 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLD- 423 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHH-
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccc-
Confidence 45667777777777776 667777777777777776654 4445566666666666666 4544332
Q ss_pred cCcccccCcCCCCeeeccCCCCCCCCcccccccccccEEEecCCcccCCcCcCccCCCCCCeEEccCCcCcccCCccccc
Q 048430 434 QIPTCLANLTSLRHLDFRSNSLNSTIPSTFWSLKYILAVDFSLNSLSGSLPLNIGNLEALGGLNLTGNQLSGYIPSSIGN 513 (973)
Q Consensus 434 ~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 513 (973)
+|+.+.+++|.+++..+ ..|+.|++++|+|++ +|. ++.+++|+.|+|++|+|+ .+|..|+.
T Consensus 424 ----------~L~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~ 484 (567)
T 1dce_A 424 ----------DLRSKFLLENSVLKMEY------ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAA 484 (567)
T ss_dssp ----------HHHHHHHHHHHHHHHHH------TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGG
T ss_pred ----------hhhhhhhhcccccccCc------cCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhc
Confidence 22333333343332111 135666666666664 454 666666666666666666 56666666
Q ss_pred CCcCCEEEcccCccccCCCCCcccccccccccccccccCCCC-CccccccccccccccCCCcccccCCC
Q 048430 514 LKNLDWLALARNAFQGPIPQSFGSLISLQSLDLSGNNISGEI-PKSLEKLSRLVDFNVSFNGLEGEIPS 581 (973)
Q Consensus 514 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~l~ls~N~l~~~~p~ 581 (973)
+++|+.|+|++|+|++ +| .|+.+++|+.|+|++|+|++.+ |..+..+++|+.|+|++|++++.+|.
T Consensus 485 l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~ 551 (567)
T 1dce_A 485 LRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGI 551 (567)
T ss_dssp CTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSC
T ss_pred CCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccH
Confidence 6666777777766664 45 5666666777777777666655 66666666677777777766666554
No 368
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.74 E-value=2.7e-20 Score=219.03 Aligned_cols=36 Identities=14% Similarity=0.050 Sum_probs=27.1
Q ss_pred ccccceeeeccccccccCcchhcccCcccEEEecccc
Q 048430 242 LPNLENLFLWKNNLSGIIPDSICNASEATILELSSNL 278 (973)
Q Consensus 242 l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~ 278 (973)
.++|+.|+|++|+++ .+|+.++.+++|+.|++++|.
T Consensus 348 ~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~ 383 (567)
T 1dce_A 348 DEQLFRCELSVEKST-VLQSELESCKELQELEPENKW 383 (567)
T ss_dssp TTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHH
T ss_pred CccceeccCChhhHH-hhHHHHHHHHHHHHhccccch
Confidence 677788888888887 567777777777777776654
No 369
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.74 E-value=9.5e-19 Score=212.48 Aligned_cols=191 Identities=23% Similarity=0.258 Sum_probs=94.0
Q ss_pred EEeecCccccccCcccCCCCCCCEEEccCCcCCCCCchhhhccCcCCeeecCCccccCcCcccccCcCCCCeeeccCCCC
Q 048430 376 LSLVNNELAGAIPTVLGKLQKLQGLDLNSNKLKGFIPTDLCKLEKLNTLLSNNNALQGQIPTCLANLTSLRHLDFRSNSL 455 (973)
Q Consensus 376 L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 455 (973)
++++.|.+. ..++.|..+++|+.|+|++|.+. .+|..+..+++|+.|+|++|.|+ .+|..|+++++|++|+|++|+|
T Consensus 206 ~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l 282 (727)
T 4b8c_D 206 DDDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRL 282 (727)
T ss_dssp -----------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCC
T ss_pred cccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcC
Confidence 344445555 55666777777777777777777 55666667777777777777776 5666677777777777777777
Q ss_pred CCCCcccccccccccEEEecCCcccCCcCcCccCCCCCCeEEccCCcCcccCCcccccCCc-CCEEEcccCccccCCCCC
Q 048430 456 NSTIPSTFWSLKYILAVDFSLNSLSGSLPLNIGNLEALGGLNLTGNQLSGYIPSSIGNLKN-LDWLALARNAFQGPIPQS 534 (973)
Q Consensus 456 ~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~-L~~L~Ls~N~l~~~~p~~ 534 (973)
+ .+|..|..+++|+.|+|++|.|+ .+|..|+.+++|+.|+|++|+|++.+|..+..+.. +..|+|++|.+++.+|..
T Consensus 283 ~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~ 360 (727)
T 4b8c_D 283 T-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE 360 (727)
T ss_dssp S-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_pred C-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccc
Confidence 6 55666667777777777777666 56666667777777777777776666666654322 223566666666666653
Q ss_pred ccccccccccccccc--------ccCCCCCccccccccccccccCCCcccc
Q 048430 535 FGSLISLQSLDLSGN--------NISGEIPKSLEKLSRLVDFNVSFNGLEG 577 (973)
Q Consensus 535 ~~~l~~L~~L~Ls~N--------~l~~~~p~~~~~l~~L~~l~ls~N~l~~ 577 (973)
|+.|++++| .|.+..+..+..+..+....+++|-+++
T Consensus 361 ------l~~l~l~~n~~~~~~~~~l~~~~~~~~~~l~~~~~~~ls~Nil~~ 405 (727)
T 4b8c_D 361 ------RRFIEINTDGEPQREYDSLQQSTEHLATDLAKRTFTVLSYNTLCQ 405 (727)
T ss_dssp -----------------------------------------------CCCG
T ss_pred ------cceeEeecccccccccCCccccccchhhcccccceeeeecccccc
Confidence 344455555 3333333344445555555555555543
No 370
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.74 E-value=1.7e-18 Score=183.82 Aligned_cols=170 Identities=20% Similarity=0.252 Sum_probs=112.6
Q ss_pred CCCCCcEEEecCCCCCCCCCcccccccCCcEEEccCCCCCCCCCccccCCCCCccEEEeeCcccCCCCCccccCCCCCCe
Q 048430 67 NLSFLVSLNISGNSFYDTLPNELWHMRRLKIIDFSSNSLSGSLPGDMCNSFTQLESFDVSSNKITGEFPSAIVNISSLKS 146 (973)
Q Consensus 67 ~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 146 (973)
.+..+..++++.|.+.+ ++ .+..+++|+.|++++|.+. .+| . +..+++|++|+|++|++++.. . +.++++|++
T Consensus 17 ~l~~l~~l~l~~~~i~~-~~-~~~~l~~L~~L~l~~n~i~-~l~-~-l~~l~~L~~L~L~~N~i~~~~-~-l~~l~~L~~ 89 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTD-LV-SQKELSGVQNFNGDNSNIQ-SLA-G-MQFFTNLKELHLSHNQISDLS-P-LKDLTKLEE 89 (263)
T ss_dssp HHHHHHHHHHTCSCTTS-EE-CHHHHTTCSEEECTTSCCC-CCT-T-GGGCTTCCEEECCSSCCCCCG-G-GTTCSSCCE
T ss_pred HHHHHHHHHhcCCCccc-cc-chhhcCcCcEEECcCCCcc-cch-H-HhhCCCCCEEECCCCccCCCh-h-hccCCCCCE
Confidence 45666777777777753 33 5777888888888888887 566 2 467788888888888888543 3 778888888
Q ss_pred EEccCccccccCCccccCCCCCccEEEcccccccccCCCCCCCccccCCCCccEEEecCCcccCccccccccCCcceeEE
Q 048430 147 IRLDNNSLSGSFPTDLCTRLPSLVQLRLLGNNITGRIPNREIPNEIGNLHNLKILDLGGNNIAGLIPSMIFNNSNMVAIL 226 (973)
Q Consensus 147 L~L~~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~ 226 (973)
|+|++|+++ .+|.... ++|++|+|++|+|++ ++ .++.+++|++|+|++|+|++. + .+..+++|+.|+
T Consensus 90 L~L~~N~l~-~l~~~~~---~~L~~L~L~~N~l~~------~~-~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~ 156 (263)
T 1xeu_A 90 LSVNRNRLK-NLNGIPS---ACLSRLFLDNNELRD------TD-SLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLD 156 (263)
T ss_dssp EECCSSCCS-CCTTCCC---SSCCEEECCSSCCSB------SG-GGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEE
T ss_pred EECCCCccC-CcCcccc---CcccEEEccCCccCC------Ch-hhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEE
Confidence 888888887 5554332 778888888888863 22 477788888888888888754 2 455555555555
Q ss_pred eecccccccCCCCCCccccceeeeccccccc
Q 048430 227 LYGNHLSGHLPSSIYLPNLENLFLWKNNLSG 257 (973)
Q Consensus 227 l~~n~l~~~~~~~~~l~~L~~L~L~~N~l~~ 257 (973)
+++|++++. +....+++|++|++++|.+.+
T Consensus 157 L~~N~i~~~-~~l~~l~~L~~L~l~~N~~~~ 186 (263)
T 1xeu_A 157 LHGNEITNT-GGLTRLKKVNWIDLTGQKCVN 186 (263)
T ss_dssp CTTSCCCBC-TTSTTCCCCCEEEEEEEEEEC
T ss_pred CCCCcCcch-HHhccCCCCCEEeCCCCcccC
Confidence 555555443 222334555555555555543
No 371
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.74 E-value=1.7e-18 Score=183.86 Aligned_cols=171 Identities=21% Similarity=0.289 Sum_probs=111.8
Q ss_pred CCCcccEEEeecCccccccCcccCCCCCCCEEEccCCcCCCCCchhhhccCcCCeeecCCccccCcCcccccCcCCCCee
Q 048430 369 NLSNLLVLSLVNNELAGAIPTVLGKLQKLQGLDLNSNKLKGFIPTDLCKLEKLNTLLSNNNALQGQIPTCLANLTSLRHL 448 (973)
Q Consensus 369 ~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L 448 (973)
.+.++..+++++|.+++. + .+..+++|++|++++|.++. ++ .+..+++|+.|++++|++++..+ +..+++|++|
T Consensus 17 ~l~~l~~l~l~~~~i~~~-~-~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L 90 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTDL-V-SQKELSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHHTCSCTTSE-E-CHHHHTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEE
T ss_pred HHHHHHHHHhcCCCcccc-c-chhhcCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEE
Confidence 345566667777777633 2 46667777777777777773 34 56677777777777777775544 6677777777
Q ss_pred eccCCCCCCCCcccccccccccEEEecCCcccCCcCcCccCCCCCCeEEccCCcCcccCCcccccCCcCCEEEcccCccc
Q 048430 449 DFRSNSLNSTIPSTFWSLKYILAVDFSLNSLSGSLPLNIGNLEALGGLNLTGNQLSGYIPSSIGNLKNLDWLALARNAFQ 528 (973)
Q Consensus 449 ~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 528 (973)
++++|++++. |... . ++|+.|++++|++++ ++ .+..+++|+.|+|++|++++ ++ .++.+++|+.|+|++|+++
T Consensus 91 ~L~~N~l~~l-~~~~-~-~~L~~L~L~~N~l~~-~~-~l~~l~~L~~L~Ls~N~i~~-~~-~l~~l~~L~~L~L~~N~i~ 163 (263)
T 1xeu_A 91 SVNRNRLKNL-NGIP-S-ACLSRLFLDNNELRD-TD-SLIHLKNLEILSIRNNKLKS-IV-MLGFLSKLEVLDLHGNEIT 163 (263)
T ss_dssp ECCSSCCSCC-TTCC-C-SSCCEEECCSSCCSB-SG-GGTTCTTCCEEECTTSCCCB-CG-GGGGCTTCCEEECTTSCCC
T ss_pred ECCCCccCCc-Cccc-c-CcccEEEccCCccCC-Ch-hhcCcccccEEECCCCcCCC-Ch-HHccCCCCCEEECCCCcCc
Confidence 7777777653 2221 2 667777777777764 22 46667777777777777764 33 5666777777777777776
Q ss_pred cCCCCCcccccccccccccccccCCC
Q 048430 529 GPIPQSFGSLISLQSLDLSGNNISGE 554 (973)
Q Consensus 529 ~~~p~~~~~l~~L~~L~Ls~N~l~~~ 554 (973)
+. ..+..+++|+.|+|++|++++.
T Consensus 164 ~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 164 NT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp BC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred ch--HHhccCCCCCEEeCCCCcccCC
Confidence 54 5566677777777777777654
No 372
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.73 E-value=8.2e-18 Score=170.40 Aligned_cols=151 Identities=13% Similarity=0.187 Sum_probs=83.6
Q ss_pred cCcCCeeecCCccccCcCcccccCcCCCCeeeccCCCCCCCCcccccccccccEEEecCCcccCCcCcCccCCCCCCeEE
Q 048430 418 LEKLNTLLSNNNALQGQIPTCLANLTSLRHLDFRSNSLNSTIPSTFWSLKYILAVDFSLNSLSGSLPLNIGNLEALGGLN 497 (973)
Q Consensus 418 l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ 497 (973)
+++|+.|++++|.++ .+| .+..+++|++|++++|.++ .+..+..+++|+.|++++|++++..|..++.+++|+.|+
T Consensus 43 l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~ 118 (197)
T 4ezg_A 43 MNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLD 118 (197)
T ss_dssp HHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEE
T ss_pred cCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEE
Confidence 344444444444444 222 3444455555555555443 223455555555555555555555555566666666666
Q ss_pred ccCCcCcccCCcccccCCcCCEEEcccCc-cccCCCCCcccccccccccccccccCCCCCccccccccccccccCCCccc
Q 048430 498 LTGNQLSGYIPSSIGNLKNLDWLALARNA-FQGPIPQSFGSLISLQSLDLSGNNISGEIPKSLEKLSRLVDFNVSFNGLE 576 (973)
Q Consensus 498 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~ 576 (973)
|++|++++..|..++.+++|+.|+|++|+ ++ .+| .+..+++|+.|+|++|++++ ++ .+..+++|+.|++++|++.
T Consensus 119 Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~N~i~ 194 (197)
T 4ezg_A 119 ISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLYAFSQTIG 194 (197)
T ss_dssp CCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEEECBC---
T ss_pred ecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEEeeCcccC
Confidence 66666665556666666666666666666 43 444 46666666666666666664 23 5666666666666666654
No 373
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.73 E-value=6.5e-18 Score=171.17 Aligned_cols=151 Identities=17% Similarity=0.197 Sum_probs=81.9
Q ss_pred CCCCEEEccCCcCCCCCchhhhccCcCCeeecCCccccCcCcccccCcCCCCeeeccCCCCCCCCcccccccccccEEEe
Q 048430 395 QKLQGLDLNSNKLKGFIPTDLCKLEKLNTLLSNNNALQGQIPTCLANLTSLRHLDFRSNSLNSTIPSTFWSLKYILAVDF 474 (973)
Q Consensus 395 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 474 (973)
++|++|++++|.++ .+| .+..+++|+.|++++|.++ .+..+..+++|++|++++|++++..+..+..+++|+.|++
T Consensus 44 ~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L 119 (197)
T 4ezg_A 44 NSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDI 119 (197)
T ss_dssp HTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEEC
T ss_pred CCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEe
Confidence 33444444444444 222 2344444444444444332 1123444555555555555555445555555555555566
Q ss_pred cCCcccCCcCcCccCCCCCCeEEccCCc-CcccCCcccccCCcCCEEEcccCccccCCCCCcccccccccccccccccCC
Q 048430 475 SLNSLSGSLPLNIGNLEALGGLNLTGNQ-LSGYIPSSIGNLKNLDWLALARNAFQGPIPQSFGSLISLQSLDLSGNNISG 553 (973)
Q Consensus 475 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 553 (973)
++|++++..|..++.+++|+.|+|++|+ ++ .+| .+..+++|+.|++++|++++ ++ .+..+++|++|++++|+|.+
T Consensus 120 s~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~N~i~~ 195 (197)
T 4ezg_A 120 SHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLYAFSQTIGG 195 (197)
T ss_dssp CSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEEECBC----
T ss_pred cCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEEeeCcccCC
Confidence 6666655555566666666777777766 44 444 56667777777777777764 33 56777777777777777653
No 374
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.71 E-value=5.2e-17 Score=163.60 Aligned_cols=113 Identities=24% Similarity=0.279 Sum_probs=71.4
Q ss_pred CCCeeeccCCCCCCCCcc-cccccccccEEEecCCcccCCcCcCccCCCCCCeEEccCCcCcccCCcccccCCcCCEEEc
Q 048430 444 SLRHLDFRSNSLNSTIPS-TFWSLKYILAVDFSLNSLSGSLPLNIGNLEALGGLNLTGNQLSGYIPSSIGNLKNLDWLAL 522 (973)
Q Consensus 444 ~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 522 (973)
+|++|++++|++++..+. .|..+++|+.|++++|+|++..|..|.++++|+.|+|++|+|++..|..|..+++|+.|+|
T Consensus 30 ~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 109 (192)
T 1w8a_A 30 HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNL 109 (192)
T ss_dssp TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEEC
T ss_pred CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEEC
Confidence 555566666665544443 3555666666666666666555666666666666666666666655666666666666666
Q ss_pred ccCccccCCCCCcccccccccccccccccCCCCC
Q 048430 523 ARNAFQGPIPQSFGSLISLQSLDLSGNNISGEIP 556 (973)
Q Consensus 523 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 556 (973)
++|+|++.+|..|..+++|++|+|++|.+++..+
T Consensus 110 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 110 YDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred CCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 6666666666666666666677777776665544
No 375
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.70 E-value=6.5e-17 Score=162.86 Aligned_cols=153 Identities=23% Similarity=0.262 Sum_probs=95.6
Q ss_pred cCCeeecCCccccCcCcc-cccCcCCCCeeeccCCCCCCCCcccccccccccEEEecCCcccCCcCcCccCCCCCCeEEc
Q 048430 420 KLNTLLSNNNALQGQIPT-CLANLTSLRHLDFRSNSLNSTIPSTFWSLKYILAVDFSLNSLSGSLPLNIGNLEALGGLNL 498 (973)
Q Consensus 420 ~L~~L~l~~N~l~~~~~~-~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L 498 (973)
+|+.|++++|.+++..+. .|..+++|++|+|++|+|++..|..|..+++|+.|++++|+|++..+..|.++++|+.|+|
T Consensus 30 ~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 109 (192)
T 1w8a_A 30 HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNL 109 (192)
T ss_dssp TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEEC
T ss_pred CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEEC
Confidence 444445555554444332 3556666666666666666666666666667777777777777666666778888888888
Q ss_pred cCCcCcccCCcccccCCcCCEEEcccCccccCCCCCcccc-cccccccccccccCCCCCccccccccccccccCCCcccc
Q 048430 499 TGNQLSGYIPSSIGNLKNLDWLALARNAFQGPIPQSFGSL-ISLQSLDLSGNNISGEIPKSLEKLSRLVDFNVSFNGLEG 577 (973)
Q Consensus 499 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~ 577 (973)
++|+|++..|..|..+++|+.|+|++|.+++..+- ..+ ..++...+..+......|..+.. ....+++.+.+..
T Consensus 110 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l--~~~~~~l~~~~~~~~~~~C~~P~~l~~---~~l~~l~~~~~~C 184 (192)
T 1w8a_A 110 YDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHL--AWFAEWLRKKSLNGGAARCGAPSKVRD---VQIKDLPHSEFKC 184 (192)
T ss_dssp CSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGG--HHHHHHHHHHCCSGGGCBBCSSTTTTT---SBGGGSCTTTCCC
T ss_pred CCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcc--hHHHHHHHHcCCCCCCCCCCCChHHcC---CChhhCcHhhcCc
Confidence 88888877788888888888888888888865542 111 12333344445444444544333 3344555555543
No 376
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.70 E-value=2.1e-17 Score=174.77 Aligned_cols=137 Identities=20% Similarity=0.274 Sum_probs=107.1
Q ss_pred CCCCccccccCceEEEEEEe-CCCeE--EEEEEEeccch------------------------hhHHHHHHHHHHHHhcc
Q 048430 682 FGESNLLGSGSFDNVYKATL-ANGVS--VAVKVFNLQED------------------------RALKSFDTECEVMRRIR 734 (973)
Q Consensus 682 ~~~~~~lg~G~~g~Vy~~~~-~~~~~--vavK~~~~~~~------------------------~~~~~~~~e~~~l~~l~ 734 (973)
|...+.||+|+||.||+|.. .+|+. ||||+++.... .....+.+|++++.+++
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 45678999999999999997 68999 99998754311 11236889999999998
Q ss_pred CCce--eEEEeeeecCCeeEEEEEecCC-C----CHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCC
Q 048430 735 HRNL--IKIVSSCSNPGFKALIMQYMPQ-G----SLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLK 807 (973)
Q Consensus 735 h~ni--v~l~~~~~~~~~~~lv~e~~~~-g----sL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk 807 (973)
|+++ ..++++ +..++||||+.+ | +|.++... .++..+..++.|++.||.|||+ +.+|+|||||
T Consensus 129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~----~~~~~~~~i~~qi~~~l~~lH~--~~givHrDlk 198 (258)
T 1zth_A 129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE----LKELDVEGIFNDVVENVKRLYQ--EAELVHADLS 198 (258)
T ss_dssp HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG----GGGSCHHHHHHHHHHHHHHHHH--TSCEECSSCS
T ss_pred hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc----cChHHHHHHHHHHHHHHHHHHH--HCCEEeCCCC
Confidence 8754 334432 356899999942 3 77776543 2344677899999999999995 4799999999
Q ss_pred CCcEEeCCCCcEEEeeccccccc
Q 048430 808 PNNVLLDDDMVAHLGDFGIAKLL 830 (973)
Q Consensus 808 ~~Nill~~~~~~kl~Dfgla~~~ 830 (973)
|+|||++. .++|+|||+|...
T Consensus 199 p~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 199 EYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp TTSEEESS--SEEECCCTTCEET
T ss_pred HHHEEEcC--cEEEEECcccccC
Confidence 99999998 9999999999754
No 377
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.67 E-value=2.9e-17 Score=180.94 Aligned_cols=39 Identities=15% Similarity=0.263 Sum_probs=25.4
Q ss_pred cCcccEEEeccccccccCCCcccccccceEEEccCCcCCC
Q 048430 266 ASEATILELSSNLFSGLVPNTFGNCRQLQILSLGDNQLTT 305 (973)
Q Consensus 266 l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~ 305 (973)
+++|+.|+|.+ .++.+.+.+|.++++|+.|++++|.++.
T Consensus 100 ~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~ 138 (329)
T 3sb4_A 100 KQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPN 138 (329)
T ss_dssp CTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCE
T ss_pred cCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccc
Confidence 66677777766 6666666666666666666666666654
No 378
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.67 E-value=4.1e-17 Score=179.71 Aligned_cols=199 Identities=13% Similarity=0.069 Sum_probs=115.4
Q ss_pred CCCCCCcccEEEeecCccccccCcccCCCCCCCEEEccCCc----CCCCCchhhhccCcCC-eeecCCccccCcCcccc-
Q 048430 366 GFGNLSNLLVLSLVNNELAGAIPTVLGKLQKLQGLDLNSNK----LKGFIPTDLCKLEKLN-TLLSNNNALQGQIPTCL- 439 (973)
Q Consensus 366 ~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~----l~~~~~~~~~~l~~L~-~L~l~~N~l~~~~~~~~- 439 (973)
+|.++++|+.|++++|.+..+.+.+|..+.++..+.+..+. ........|.++..|+ .+.+.... .++..+
T Consensus 119 aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~~~i~~~~~~---~l~~~~~ 195 (329)
T 3sb4_A 119 AFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLETTIQVGAMG---KLEDEIM 195 (329)
T ss_dssp TTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCEEEEEECTTC---CHHHHHH
T ss_pred HhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccceeEEecCCC---cHHHHHh
Confidence 35566666666666666655555666665555555544421 1222233344444444 22222211 111111
Q ss_pred ---cCcCCCCeeeccCCCCCCCCcccccccccccEEEecCCcccCCcCcCccCCCCCCeEEccCCcCcccCCcccccCCc
Q 048430 440 ---ANLTSLRHLDFRSNSLNSTIPSTFWSLKYILAVDFSLNSLSGSLPLNIGNLEALGGLNLTGNQLSGYIPSSIGNLKN 516 (973)
Q Consensus 440 ---~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 516 (973)
....+++.+.+.++-...........+++|+.+++++|+++...+..|.++.+|+.|+|++| ++...+..|.++++
T Consensus 196 ~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~ 274 (329)
T 3sb4_A 196 KAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGR 274 (329)
T ss_dssp HTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTT
T ss_pred hcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChh
Confidence 12344555555544211111111112567777777777777555566777777777777777 66555667777777
Q ss_pred CC-EEEcccCccccCCCCCcccccccccccccccccCCCCCccccccccccccc
Q 048430 517 LD-WLALARNAFQGPIPQSFGSLISLQSLDLSGNNISGEIPKSLEKLSRLVDFN 569 (973)
Q Consensus 517 L~-~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~ 569 (973)
|+ .|++.+ .++.+.+.+|.++++|+.|++++|+++...+..|..+++|+.++
T Consensus 275 L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 275 LAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp CCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEE
T ss_pred ccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhc
Confidence 87 777777 66656667788888888888877777766666777777777765
No 379
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.66 E-value=6.8e-16 Score=153.32 Aligned_cols=135 Identities=23% Similarity=0.364 Sum_probs=92.8
Q ss_pred CCcceEEEEEeeCCCCcEEEEecCCCCCCCcCCCCCCCCCCCcEEEecCCCCCCCCCcccccccCCcEEEccCCCCCCCC
Q 048430 30 ASVCNWVGVTCSIRHGRVAALSLPNLSLGGTLPPHVGNLSFLVSLNISGNSFYDTLPNELWHMRRLKIIDFSSNSLSGSL 109 (973)
Q Consensus 30 ~~~c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~ 109 (973)
...|.|.+|.|+.. +++ .+|..+ .++|++|+|++|++.+..+..++.+++|++|+|++|+++ .+
T Consensus 4 ~C~C~~~~l~~~~~------------~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~~ 67 (177)
T 2o6r_A 4 RCSCSGTEIRCNSK------------GLT-SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQ-SL 67 (177)
T ss_dssp TCEEETTEEECCSS------------CCS-SCCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCC-CC
T ss_pred CCEeCCCEEEecCC------------CCc-cCCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcce-Ee
Confidence 44588999988643 333 345433 257888888888887665666777888888888888887 56
Q ss_pred CccccCCCCCccEEEeeCcccCCCCCccccCCCCCCeEEccCccccccCCccccCCCCCccEEEcccccccc
Q 048430 110 PGDMCNSFTQLESFDVSSNKITGEFPSAIVNISSLKSIRLDNNSLSGSFPTDLCTRLPSLVQLRLLGNNITG 181 (973)
Q Consensus 110 p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~ 181 (973)
|...+..+++|++|+|++|++++..+..|.++++|++|+|++|+++ .+|...+..+++|++|+|++|.+++
T Consensus 68 ~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~~~~~~~~l~~L~~L~l~~N~~~~ 138 (177)
T 2o6r_A 68 PDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLK-SVPDGIFDRLTSLQKIWLHTNPWDC 138 (177)
T ss_dssp CTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCS-CCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred ChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcce-EeCHHHhcCCcccCEEEecCCCeec
Confidence 6666677777777777777777665556677777777777777776 5665555555666666666665543
No 380
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.64 E-value=2.9e-16 Score=154.50 Aligned_cols=133 Identities=20% Similarity=0.169 Sum_probs=97.7
Q ss_pred CCCCeeeccCCCCC-CCCcccccccccccEEEecCCcccCCcCcCccCCCCCCeEEccCCcCcccCCcccccCCcCCEEE
Q 048430 443 TSLRHLDFRSNSLN-STIPSTFWSLKYILAVDFSLNSLSGSLPLNIGNLEALGGLNLTGNQLSGYIPSSIGNLKNLDWLA 521 (973)
Q Consensus 443 ~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 521 (973)
++|++|++++|.++ +.+|..+..+++|+.|++++|.+++. ..+..+++|+.|+|++|++++.+|..+..+++|+.|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 56777777777776 56666677777777777777777754 5677777888888888888766777777788888888
Q ss_pred cccCccccCC-CCCcccccccccccccccccCCCCC---ccccccccccccccCCCcccc
Q 048430 522 LARNAFQGPI-PQSFGSLISLQSLDLSGNNISGEIP---KSLEKLSRLVDFNVSFNGLEG 577 (973)
Q Consensus 522 Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~l~ls~N~l~~ 577 (973)
|++|++++.. +..+..+++|+.|+|++|++++..+ ..+..+++|+.|++++|.+..
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~ 161 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQE 161 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCB
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChhh
Confidence 8888887432 2677778888888888888876554 477778888888888887753
No 381
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.64 E-value=1.4e-15 Score=152.88 Aligned_cols=125 Identities=27% Similarity=0.409 Sum_probs=95.2
Q ss_pred EecCCCCCCCcCCCCCCCCCCCcEEEecCCCCCCCCCcccccccCCcEEEccCCCCCCCCCccccCCCCCccEEEeeCcc
Q 048430 50 LSLPNLSLGGTLPPHVGNLSFLVSLNISGNSFYDTLPNELWHMRRLKIIDFSSNSLSGSLPGDMCNSFTQLESFDVSSNK 129 (973)
Q Consensus 50 l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~~l~~L~~L~Ls~N~ 129 (973)
+++++++++ .+|..+. +.|++|+|++|++. .+|..|.++++|+.|+|++|.++ .++...|..+++|++|+|++|+
T Consensus 15 l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~-~i~~~~f~~l~~L~~L~Ls~N~ 89 (193)
T 2wfh_A 15 VRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRIS-TLSNQSFSNMTQLLTLILSYNR 89 (193)
T ss_dssp EECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSC
T ss_pred EEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCC-EeCHhHccCCCCCCEEECCCCc
Confidence 344455555 5666543 57888888888884 77888888888888888888888 5666667788888888888888
Q ss_pred cCCCCCccccCCCCCCeEEccCccccccCCccccCCCCCccEEEccccccc
Q 048430 130 ITGEFPSAIVNISSLKSIRLDNNSLSGSFPTDLCTRLPSLVQLRLLGNNIT 180 (973)
Q Consensus 130 l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~ 180 (973)
|++..|..|.++++|+.|+|++|+|+ .+|...|..+++|+.|+|++|.+.
T Consensus 90 l~~i~~~~f~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 90 LRCIPPRTFDGLKSLRLLSLHGNDIS-VVPEGAFNDLSALSHLAIGANPLY 139 (193)
T ss_dssp CCBCCTTTTTTCTTCCEEECCSSCCC-BCCTTTTTTCTTCCEEECCSSCEE
T ss_pred cCEeCHHHhCCCCCCCEEECCCCCCC-eeChhhhhcCccccEEEeCCCCee
Confidence 88777777888888888888888887 677766667777777777777665
No 382
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.63 E-value=8.6e-16 Score=154.55 Aligned_cols=109 Identities=27% Similarity=0.331 Sum_probs=62.3
Q ss_pred cccEEEecCCcccCCcCcCccCCCCCCeEEccCCcCcccCCcccccCCcCCEEEcccCccccCCCCCccccccccccccc
Q 048430 468 YILAVDFSLNSLSGSLPLNIGNLEALGGLNLTGNQLSGYIPSSIGNLKNLDWLALARNAFQGPIPQSFGSLISLQSLDLS 547 (973)
Q Consensus 468 ~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 547 (973)
+|+.|++++|+|+ .+|..|.++++|+.|+|++|+|++..+..|.++++|+.|+|++|+|++..|..|..+++|++|+|+
T Consensus 32 ~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~ 110 (193)
T 2wfh_A 32 DVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLH 110 (193)
T ss_dssp TCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECC
T ss_pred CCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEECC
Confidence 4455555555554 444555555555555555555555445555556666666666666665555556666666666666
Q ss_pred ccccCCCCCccccccccccccccCCCcccc
Q 048430 548 GNNISGEIPKSLEKLSRLVDFNVSFNGLEG 577 (973)
Q Consensus 548 ~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~ 577 (973)
+|+|++..+..|..+++|+.|++++|++.+
T Consensus 111 ~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 111 GNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp SSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 666654444455556666666666665554
No 383
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.63 E-value=9.3e-16 Score=150.89 Aligned_cols=132 Identities=21% Similarity=0.177 Sum_probs=61.2
Q ss_pred CCCCEEEccCCcCC-CCCchhhhccCcCCeeecCCccccCcCcccccCcCCCCeeeccCCCCCCCCcccccccccccEEE
Q 048430 395 QKLQGLDLNSNKLK-GFIPTDLCKLEKLNTLLSNNNALQGQIPTCLANLTSLRHLDFRSNSLNSTIPSTFWSLKYILAVD 473 (973)
Q Consensus 395 ~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 473 (973)
++|++|++++|+++ +.+|..+..+++|+.|++++|.+++. ..+..+++|++|++++|++++.+|..+..+++|+.|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 34555555555544 33444444444444444444444433 3444555555555555555544444444444444444
Q ss_pred ecCCcccCCc-CcCccCCCCCCeEEccCCcCcccCC---cccccCCcCCEEEcccCccc
Q 048430 474 FSLNSLSGSL-PLNIGNLEALGGLNLTGNQLSGYIP---SSIGNLKNLDWLALARNAFQ 528 (973)
Q Consensus 474 ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~Ls~N~l~ 528 (973)
+++|++++.. +..+..+++|+.|++++|++++..+ ..+..+++|+.|++++|.+.
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 4444444321 1344444444555555554443222 24444444444444444444
No 384
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.61 E-value=3.3e-16 Score=150.77 Aligned_cols=127 Identities=19% Similarity=0.203 Sum_probs=83.9
Q ss_pred CCCCeeeccCCCCC-CCCcccccccccccEEEecCCcccCCcCcCccCCCCCCeEEccCCcCcccCCcccccCCcCCEEE
Q 048430 443 TSLRHLDFRSNSLN-STIPSTFWSLKYILAVDFSLNSLSGSLPLNIGNLEALGGLNLTGNQLSGYIPSSIGNLKNLDWLA 521 (973)
Q Consensus 443 ~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 521 (973)
++|+.|++++|.++ +.+|..+..+++|+.|++++|.+++. ..++.+++|+.|+|++|++++.+|..++.+++|+.|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 45566666666655 45555555666666666666666543 5566677777777777777755666666677777777
Q ss_pred cccCccccC-CCCCcccccccccccccccccCCCCC---ccccccccccccccC
Q 048430 522 LARNAFQGP-IPQSFGSLISLQSLDLSGNNISGEIP---KSLEKLSRLVDFNVS 571 (973)
Q Consensus 522 Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~l~ls 571 (973)
+++|++++. .|..++.+++|++|++++|++++..+ ..+..+++|+.||++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 777777642 23667777777777777777776554 467777777777765
No 385
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.61 E-value=1.7e-15 Score=150.47 Aligned_cols=113 Identities=21% Similarity=0.235 Sum_probs=61.1
Q ss_pred cccEEEecCCcccCCcCcCccCCCCCCeEEccCCcCcccCCcccccCCcCCEEEcccCccccCCCCCccccccccccccc
Q 048430 468 YILAVDFSLNSLSGSLPLNIGNLEALGGLNLTGNQLSGYIPSSIGNLKNLDWLALARNAFQGPIPQSFGSLISLQSLDLS 547 (973)
Q Consensus 468 ~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 547 (973)
+|+.|++++|++++..+..++.+++|+.|+|++|++++..+..|+.+++|+.|+|++|++++..+..|..+++|++|+|+
T Consensus 29 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 108 (177)
T 2o6r_A 29 SATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALD 108 (177)
T ss_dssp TCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEECc
Confidence 44455555555554334444555555555555555554444445555555555555555554444455555555555555
Q ss_pred ccccCCCCCccccccccccccccCCCcccccCC
Q 048430 548 GNNISGEIPKSLEKLSRLVDFNVSFNGLEGEIP 580 (973)
Q Consensus 548 ~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p 580 (973)
+|+|++..+..+..+++|+.|++++|++++.+|
T Consensus 109 ~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 109 TNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp SSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 555554444445555556666666665555444
No 386
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.59 E-value=1e-15 Score=147.21 Aligned_cols=126 Identities=23% Similarity=0.262 Sum_probs=65.7
Q ss_pred cCCeeecCCcccc-CcCcccccCcCCCCeeeccCCCCCCCCcccccccccccEEEecCCcccCCcCcCccCCCCCCeEEc
Q 048430 420 KLNTLLSNNNALQ-GQIPTCLANLTSLRHLDFRSNSLNSTIPSTFWSLKYILAVDFSLNSLSGSLPLNIGNLEALGGLNL 498 (973)
Q Consensus 420 ~L~~L~l~~N~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L 498 (973)
+|+.|++++|.++ +.+|..+..+++|++|++++|.+++. ..+..+++|+.|++++|++++.+|..++.+++|+.|++
T Consensus 18 ~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l 95 (149)
T 2je0_A 18 DVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNL 95 (149)
T ss_dssp GCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEEC
T ss_pred cCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEEC
Confidence 3444444444444 33444444444455555555544433 34444555555555555555444544555555666666
Q ss_pred cCCcCccc-CCcccccCCcCCEEEcccCccccCCC---CCccccccccccccc
Q 048430 499 TGNQLSGY-IPSSIGNLKNLDWLALARNAFQGPIP---QSFGSLISLQSLDLS 547 (973)
Q Consensus 499 s~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~Ls 547 (973)
++|++++. .+..++.+++|+.|++++|.+++..+ ..+..+++|+.||++
T Consensus 96 s~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 96 SGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp TTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred CCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 66666532 23556666666666666666664433 356666666666665
No 387
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.59 E-value=4.2e-14 Score=158.88 Aligned_cols=172 Identities=16% Similarity=0.198 Sum_probs=86.1
Q ss_pred cCCcEEEccCCCCCCCCCccccCCCCCccEEEeeCcccCCCCCccccCCCCCCeEEccCccccccCCccccCCCCCccEE
Q 048430 93 RRLKIIDFSSNSLSGSLPGDMCNSFTQLESFDVSSNKITGEFPSAIVNISSLKSIRLDNNSLSGSFPTDLCTRLPSLVQL 172 (973)
Q Consensus 93 ~~L~~L~Ls~n~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L 172 (973)
..++.+.+.++ +. .|+...|.+. +|+.+++.+| ++..-..+|.+. +|+.+.+.+ .++ .|+...|.++++|+.+
T Consensus 113 ~~l~~i~ip~~-i~-~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~-~I~~~aF~~c~~L~~l 185 (401)
T 4fdw_A 113 KGYNEIILPNS-VK-SIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLE-QLKEDIFYYCYNLKKA 185 (401)
T ss_dssp SSCSEEECCTT-CC-EECTTTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCC-EECSSTTTTCTTCCEE
T ss_pred CCccEEEECCc-cC-EehHhhcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-Ccc-EehHHHhhCcccCCee
Confidence 34444444332 22 3444444432 4555554444 333333344442 355555443 333 4444444444444444
Q ss_pred EcccccccccCCCCCCCccccCCCCccEEEecCCcccCccccccccCCcceeEEeecccccccCCCCCCccccceeeecc
Q 048430 173 RLLGNNITGRIPNREIPNEIGNLHNLKILDLGGNNIAGLIPSMIFNNSNMVAILLYGNHLSGHLPSSIYLPNLENLFLWK 252 (973)
Q Consensus 173 ~L~~N~l~~~~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L~~ 252 (973)
+|.+|+++ .+|......++|+.+.|..+ ++.+...+|.+ +++|+.+++..
T Consensus 186 ~l~~n~l~------~I~~~aF~~~~L~~l~lp~~-l~~I~~~aF~~-----------------------~~~L~~l~l~~ 235 (401)
T 4fdw_A 186 DLSKTKIT------KLPASTFVYAGIEEVLLPVT-LKEIGSQAFLK-----------------------TSQLKTIEIPE 235 (401)
T ss_dssp ECTTSCCS------EECTTTTTTCCCSEEECCTT-CCEECTTTTTT-----------------------CTTCCCEECCT
T ss_pred ecCCCcce------EechhhEeecccCEEEeCCc-hheehhhHhhC-----------------------CCCCCEEecCC
Confidence 44444443 22222112344444444422 33333333333 55666666655
Q ss_pred ccccccCcchhcccCcccEEEeccccccccCCCcccccccceEEEccCCcCC
Q 048430 253 NNLSGIIPDSICNASEATILELSSNLFSGLVPNTFGNCRQLQILSLGDNQLT 304 (973)
Q Consensus 253 N~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~ 304 (973)
| ++.+...+|.+ ++|+.+.+ .|.++.+...+|.++++|+.+.+.+|.+.
T Consensus 236 ~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~ 284 (401)
T 4fdw_A 236 N-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFN 284 (401)
T ss_dssp T-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCC
T ss_pred C-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCcccc
Confidence 3 44455566666 67777777 45566677777888888888877777654
No 388
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.58 E-value=1.8e-14 Score=161.90 Aligned_cols=201 Identities=11% Similarity=0.137 Sum_probs=105.9
Q ss_pred CCCCCcccEEEeecCccccccCcccCCCCCCCEEEccCCcCCCCCchhhhccCcCCeeecCCccccCcCcccccCcCCCC
Q 048430 367 FGNLSNLLVLSLVNNELAGAIPTVLGKLQKLQGLDLNSNKLKGFIPTDLCKLEKLNTLLSNNNALQGQIPTCLANLTSLR 446 (973)
Q Consensus 367 ~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~ 446 (973)
|.++++|+.+++++|+++.....+|. ..+|+.+.|..+ ++.+....|.++++|+.+.+..| ++.....+|.+ .+|+
T Consensus 176 F~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~ 251 (401)
T 4fdw_A 176 FYYCYNLKKADLSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGIT 251 (401)
T ss_dssp TTTCTTCCEEECTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCS
T ss_pred hhCcccCCeeecCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCcc
Confidence 34444444444444444433333333 244444444422 33333334444444444444432 33233334444 4455
Q ss_pred eeeccCCCCCCCCcccccccccccEEEecCCccc-----CCcCcCccCCCCCCeEEccCCcCcccCCcccccCCcCCEEE
Q 048430 447 HLDFRSNSLNSTIPSTFWSLKYILAVDFSLNSLS-----GSLPLNIGNLEALGGLNLTGNQLSGYIPSSIGNLKNLDWLA 521 (973)
Q Consensus 447 ~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~-----~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 521 (973)
.+.+ .|.++.....+|.++++|+.+++.+|.+. ...+..|.++++|+.++|. +.++......|.++.+|+.++
T Consensus 252 ~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~ 329 (401)
T 4fdw_A 252 TVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLT 329 (401)
T ss_dssp EEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEE
T ss_pred EEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEE
Confidence 5555 23344344445555555555555555443 2344566777777777777 346545556677777777777
Q ss_pred cccCccccCCCCCcccccccccccccccccCCCCCccccccc-cccccccCCCcc
Q 048430 522 LARNAFQGPIPQSFGSLISLQSLDLSGNNISGEIPKSLEKLS-RLVDFNVSFNGL 575 (973)
Q Consensus 522 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~l~ls~N~l 575 (973)
|..| ++.+-+.+|.++ +|+.+++++|.+....+..|..++ .+..+++..|.+
T Consensus 330 lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~ 382 (401)
T 4fdw_A 330 IPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESV 382 (401)
T ss_dssp ECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGH
T ss_pred ECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHH
Confidence 7544 554556677777 777777777777655556666663 455666655543
No 389
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.56 E-value=1.3e-15 Score=166.54 Aligned_cols=137 Identities=13% Similarity=0.189 Sum_probs=101.6
Q ss_pred CCCCCccccccCceEEEEEEeCCCeEEEEEEEeccch--------------h--------hHHHHHHHHHHHHhccCCce
Q 048430 681 GFGESNLLGSGSFDNVYKATLANGVSVAVKVFNLQED--------------R--------ALKSFDTECEVMRRIRHRNL 738 (973)
Q Consensus 681 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--------------~--------~~~~~~~e~~~l~~l~h~ni 738 (973)
-|.+.++||+|+||.||+|...+|+.||||+++.... . ......+|...+.++.+..+
T Consensus 96 iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv 175 (397)
T 4gyi_A 96 VYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGF 175 (397)
T ss_dssp CSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 3778899999999999999998999999998753210 0 01123456777777755443
Q ss_pred e--EEEeeeecCCeeEEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCC
Q 048430 739 I--KIVSSCSNPGFKALIMQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDD 816 (973)
Q Consensus 739 v--~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~ 816 (973)
. ..+++ ...++||||+++++|.++... .....++.|++.+|.||| ..+||||||||.|||++++
T Consensus 176 ~vp~p~~~----~~~~LVME~i~G~~L~~l~~~-------~~~~~l~~qll~~l~~lH---~~gIVHrDLKp~NILl~~d 241 (397)
T 4gyi_A 176 PVPEPIAQ----SRHTIVMSLVDALPMRQVSSV-------PDPASLYADLIALILRLA---KHGLIHGDFNEFNILIREE 241 (397)
T ss_dssp SCCCEEEE----ETTEEEEECCSCEEGGGCCCC-------SCHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEEEEE
T ss_pred CCCeeeec----cCceEEEEecCCccHhhhccc-------HHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHEEEeCC
Confidence 2 22222 123799999999888765432 234568899999999999 7899999999999999887
Q ss_pred C----------cEEEeecccccccC
Q 048430 817 M----------VAHLGDFGIAKLLD 831 (973)
Q Consensus 817 ~----------~~kl~Dfgla~~~~ 831 (973)
+ .+.|+||+-+....
T Consensus 242 gd~~d~~~~~~~~~iID~~Q~V~~~ 266 (397)
T 4gyi_A 242 KDAEDPSSITLTPIIIXFPQMVSMD 266 (397)
T ss_dssp ECSSCTTSEEEEEEECCCTTCEETT
T ss_pred CCcccccccccceEEEEeCCcccCC
Confidence 6 38999999876543
No 390
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.55 E-value=8.1e-14 Score=157.40 Aligned_cols=144 Identities=12% Similarity=0.128 Sum_probs=58.5
Q ss_pred CcccEEEeecCccccccCcccCCCCCCCEEEccCCcCCCCCchhhhccCcCCeeecCCccccCcCcccccCcCCCCeeec
Q 048430 371 SNLLVLSLVNNELAGAIPTVLGKLQKLQGLDLNSNKLKGFIPTDLCKLEKLNTLLSNNNALQGQIPTCLANLTSLRHLDF 450 (973)
Q Consensus 371 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L 450 (973)
.+|+.+.+..+ ++......|..+..|+.+.+..+... .....|..+..++.+....+.+ ....|..+.+|+.+.+
T Consensus 230 ~~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i---~~~~F~~~~~L~~i~l 304 (394)
T 4fs7_A 230 TGVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIV---PEKTFYGCSSLTEVKL 304 (394)
T ss_dssp CCCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEE---CTTTTTTCTTCCEEEE
T ss_pred CCCceEEECCC-ceecccccccccccceeEEcCCCcce-eeccccccccccceeccCceee---cccccccccccccccc
Confidence 34444444332 22233444555555555555544333 3334444444554444443322 1223444555555555
Q ss_pred cCCCCCCCCcccccccccccEEEecCCcccCCcCcCccCCCCCCeEEccCCcCcccCCcccccCCcCCEEEc
Q 048430 451 RSNSLNSTIPSTFWSLKYILAVDFSLNSLSGSLPLNIGNLEALGGLNLTGNQLSGYIPSSIGNLKNLDWLAL 522 (973)
Q Consensus 451 ~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 522 (973)
..+ ++.+-..+|.++.+|+.+++..+ ++.....+|.++.+|+.+++..| ++..-...|.++.+|+.+++
T Consensus 305 ~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~l 373 (394)
T 4fs7_A 305 LDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVEL 373 (394)
T ss_dssp CTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEE
T ss_pred ccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEE
Confidence 433 33222333333344444433322 22222333444444444444333 33222333444444444444
No 391
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.54 E-value=5.5e-15 Score=146.48 Aligned_cols=134 Identities=21% Similarity=0.178 Sum_probs=101.3
Q ss_pred cccCcCCCCeeeccCCCCCCCCcccccccc-cccEEEecCCcccCCcCcCccCCCCCCeEEccCCcCcccCCcccccCCc
Q 048430 438 CLANLTSLRHLDFRSNSLNSTIPSTFWSLK-YILAVDFSLNSLSGSLPLNIGNLEALGGLNLTGNQLSGYIPSSIGNLKN 516 (973)
Q Consensus 438 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 516 (973)
.+.++.+|++|++++|+++. +|. +..+. +|+.|++++|.+++. ..++.+++|+.|+|++|+|++..+..|+.+++
T Consensus 14 ~~~~~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 89 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPD 89 (176)
T ss_dssp EEECTTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTT
T ss_pred hcCCcCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCC
Confidence 34566777777777777774 343 44443 788888888888753 56788888888888888888554455688888
Q ss_pred CCEEEcccCccccCCCC--CcccccccccccccccccCCCCCcc----ccccccccccccCCCcccc
Q 048430 517 LDWLALARNAFQGPIPQ--SFGSLISLQSLDLSGNNISGEIPKS----LEKLSRLVDFNVSFNGLEG 577 (973)
Q Consensus 517 L~~L~Ls~N~l~~~~p~--~~~~l~~L~~L~Ls~N~l~~~~p~~----~~~l~~L~~l~ls~N~l~~ 577 (973)
|+.|+|++|+|+ .+|. .+..+++|+.|+|++|+++ .+|.. +..+++|+.||+++|....
T Consensus 90 L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~~ 154 (176)
T 1a9n_A 90 LTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLKE 154 (176)
T ss_dssp CCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHHH
T ss_pred CCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHHH
Confidence 888888888886 5665 7888888888888888887 45654 8888889999998887653
No 392
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.52 E-value=2.8e-13 Score=152.95 Aligned_cols=145 Identities=14% Similarity=0.141 Sum_probs=87.2
Q ss_pred CCCCCcccEEEeecCccccccCcccCCCCCCCEEEccCCcCCCCCchhhhccCcCCeeecCCccccCcCcccccCcCCCC
Q 048430 367 FGNLSNLLVLSLVNNELAGAIPTVLGKLQKLQGLDLNSNKLKGFIPTDLCKLEKLNTLLSNNNALQGQIPTCLANLTSLR 446 (973)
Q Consensus 367 ~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~ 446 (973)
|.++..|+.+.+..+... .....|..+..++.+.+..+.+. ...|..+.+|+.+.+.++ +..+...+|.++++|+
T Consensus 249 f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~ 323 (394)
T 4fs7_A 249 FYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLV 323 (394)
T ss_dssp TTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCC
T ss_pred ccccccceeEEcCCCcce-eeccccccccccceeccCceeec---cccccccccccccccccc-cceechhhhcCCCCCC
Confidence 555566666666555433 44556666666666666554332 234556666666666544 4444555666677777
Q ss_pred eeeccCCCCCCCCcccccccccccEEEecCCcccCCcCcCccCCCCCCeEEccCCcCcccCCcccccCCcCCEE
Q 048430 447 HLDFRSNSLNSTIPSTFWSLKYILAVDFSLNSLSGSLPLNIGNLEALGGLNLTGNQLSGYIPSSIGNLKNLDWL 520 (973)
Q Consensus 447 ~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 520 (973)
.++|..+ ++.+-..+|.++.+|+.+++..| ++.....+|.++.+|+.+++..+ ++ .+...|.++++|+.+
T Consensus 324 ~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~-~~-~~~~~F~~c~~L~~I 393 (394)
T 4fs7_A 324 SIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR-LE-QYRYDFEDTTKFKWI 393 (394)
T ss_dssp EECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG-GG-GGGGGBCTTCEEEEE
T ss_pred EEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC-CE-EhhheecCCCCCcEE
Confidence 7777543 55455566777777777777665 55455567777788888877654 33 344567667666654
No 393
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.52 E-value=9.4e-17 Score=162.70 Aligned_cols=134 Identities=22% Similarity=0.305 Sum_probs=64.4
Q ss_pred CCCCCCCEEEccCCcCCCCCch------hhhccCcCCeeecCCccccCcCcccccCcCCCCeeeccCCCCCCCCcccccc
Q 048430 392 GKLQKLQGLDLNSNKLKGFIPT------DLCKLEKLNTLLSNNNALQGQIPTCLANLTSLRHLDFRSNSLNSTIPSTFWS 465 (973)
Q Consensus 392 ~~l~~L~~L~Ls~N~l~~~~~~------~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 465 (973)
.....++.++++.|.+.+..|. .+..+++|++|++++|.+++ +| .+..+++|++|++++|+++ .+|..+..
T Consensus 15 ~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~ 91 (198)
T 1ds9_A 15 EERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAV 91 (198)
T ss_dssp HHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHH
T ss_pred HhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhc
Confidence 3344555555555555555444 55555555555555555554 33 4555555555555555554 34444444
Q ss_pred cccccEEEecCCcccCCcCcCccCCCCCCeEEccCCcCcccCC-cccccCCcCCEEEcccCccccC
Q 048430 466 LKYILAVDFSLNSLSGSLPLNIGNLEALGGLNLTGNQLSGYIP-SSIGNLKNLDWLALARNAFQGP 530 (973)
Q Consensus 466 l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~ 530 (973)
+++|+.|++++|++++ +| .+..+++|+.|+|++|++++..+ ..+..+++|+.|++++|.+++.
T Consensus 92 ~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~ 155 (198)
T 1ds9_A 92 ADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYND 155 (198)
T ss_dssp HHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHH
T ss_pred CCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccc
Confidence 4455555555555442 22 34444444444444444442111 2344444444444444444433
No 394
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.51 E-value=2.1e-16 Score=160.15 Aligned_cols=155 Identities=19% Similarity=0.285 Sum_probs=100.7
Q ss_pred hhccCcCCeeecCCccccCcCcc------cccCcCCCCeeeccCCCCCCCCcccccccccccEEEecCCcccCCcCcCcc
Q 048430 415 LCKLEKLNTLLSNNNALQGQIPT------CLANLTSLRHLDFRSNSLNSTIPSTFWSLKYILAVDFSLNSLSGSLPLNIG 488 (973)
Q Consensus 415 ~~~l~~L~~L~l~~N~l~~~~~~------~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~ 488 (973)
+.....++.++++.+.+.+..|. .+..+++|++|++++|++++ +| .+..+++|+.|++++|+++ .+|..+.
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~ 90 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDA 90 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhh
Confidence 44455666666777777666665 66667777777777777765 44 6666777777777777776 5566566
Q ss_pred CCCCCCeEEccCCcCcccCCcccccCCcCCEEEcccCccccCCC-CCcccccccccccccccccCCCCCcc---------
Q 048430 489 NLEALGGLNLTGNQLSGYIPSSIGNLKNLDWLALARNAFQGPIP-QSFGSLISLQSLDLSGNNISGEIPKS--------- 558 (973)
Q Consensus 489 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~--------- 558 (973)
.+++|+.|+|++|++++ +| .++.+++|+.|+|++|++++..+ ..+..+++|++|++++|++++.+|..
T Consensus 91 ~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~ 168 (198)
T 1ds9_A 91 VADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIE 168 (198)
T ss_dssp HHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHH
T ss_pred cCCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHH
Confidence 66677777777777764 44 46667777777777777763222 35666777777777777776555542
Q ss_pred -ccccccccccccCCCccc
Q 048430 559 -LEKLSRLVDFNVSFNGLE 576 (973)
Q Consensus 559 -~~~l~~L~~l~ls~N~l~ 576 (973)
+..+++|+.|| +|.++
T Consensus 169 ~~~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 169 VVKRLPNLKKLD--GMPVD 185 (198)
T ss_dssp HHHHCSSCSEEC--CGGGT
T ss_pred HHHhCCCcEEEC--CcccC
Confidence 56667777665 55544
No 395
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.50 E-value=2.9e-14 Score=141.28 Aligned_cols=132 Identities=20% Similarity=0.215 Sum_probs=62.6
Q ss_pred cCCCCCCCEEEccCCcCCCCCchhhhccC-cCCeeecCCccccCcCcccccCcCCCCeeeccCCCCCCCCcccccccccc
Q 048430 391 LGKLQKLQGLDLNSNKLKGFIPTDLCKLE-KLNTLLSNNNALQGQIPTCLANLTSLRHLDFRSNSLNSTIPSTFWSLKYI 469 (973)
Q Consensus 391 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~-~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 469 (973)
+..+.+|++|++++|+++. +|. +..+. +|+.|++++|.+++. ..+..+++|++|++++|++++..+..|
T Consensus 15 ~~~~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~------ 84 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLD------ 84 (176)
T ss_dssp EECTTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHH------
T ss_pred cCCcCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchh------
Confidence 3444555555555555552 232 22222 455555555544432 334445555555555555543322333
Q ss_pred cEEEecCCcccCCcCcCccCCCCCCeEEccCCcCcccCCc--ccccCCcCCEEEcccCccccCCCCC----ccccccccc
Q 048430 470 LAVDFSLNSLSGSLPLNIGNLEALGGLNLTGNQLSGYIPS--SIGNLKNLDWLALARNAFQGPIPQS----FGSLISLQS 543 (973)
Q Consensus 470 ~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~--~~~~l~~L~~L~Ls~N~l~~~~p~~----~~~l~~L~~ 543 (973)
..+++|+.|+|++|+|+ .+|. .++.+++|+.|++++|.++ .+|.. +..+++|+.
T Consensus 85 ------------------~~l~~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~ 144 (176)
T 1a9n_A 85 ------------------QALPDLTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRV 144 (176)
T ss_dssp ------------------HHCTTCCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSE
T ss_pred ------------------hcCCCCCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccce
Confidence 44444444444444443 2333 4455555555555555554 33432 555555555
Q ss_pred ccccccccC
Q 048430 544 LDLSGNNIS 552 (973)
Q Consensus 544 L~Ls~N~l~ 552 (973)
||+++|.+.
T Consensus 145 Ld~~~n~~~ 153 (176)
T 1a9n_A 145 LDFQKVKLK 153 (176)
T ss_dssp ETTEECCHH
T ss_pred eCCCcCCHH
Confidence 555555543
No 396
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.50 E-value=4.9e-14 Score=138.52 Aligned_cols=89 Identities=21% Similarity=0.229 Sum_probs=42.9
Q ss_pred CCCCeEEccCCcCcccCCcccccCCcCCEEEcccCccccCCCCCcccccccccccccccccCCCCCcccccccccccccc
Q 048430 491 EALGGLNLTGNQLSGYIPSSIGNLKNLDWLALARNAFQGPIPQSFGSLISLQSLDLSGNNISGEIPKSLEKLSRLVDFNV 570 (973)
Q Consensus 491 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~l 570 (973)
++|+.|+|++|+|++..|..|..+++|+.|+|++|+|++..+..|..+++|++|+|++|+|++..+..|..+++|+.|+|
T Consensus 30 ~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 109 (170)
T 3g39_A 30 TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHIWL 109 (170)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCccCEeCHHHhcCCCCCCEEEe
Confidence 44444444444444444444444455555555555554444444444555555555555554444444444555555555
Q ss_pred CCCcccccC
Q 048430 571 SFNGLEGEI 579 (973)
Q Consensus 571 s~N~l~~~~ 579 (973)
++|++++..
T Consensus 110 ~~N~~~c~c 118 (170)
T 3g39_A 110 LNNPWDCAC 118 (170)
T ss_dssp CSSCBCTTB
T ss_pred CCCCCCCCc
Confidence 555444433
No 397
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.46 E-value=1.2e-13 Score=136.23 Aligned_cols=104 Identities=19% Similarity=0.195 Sum_probs=53.8
Q ss_pred CeeeccCCCCCCCCcccccccccccEEEecCCcccCCcCcCccCCCCCCeEEccCCcCcccCCcccccCCcCCEEEcccC
Q 048430 446 RHLDFRSNSLNSTIPSTFWSLKYILAVDFSLNSLSGSLPLNIGNLEALGGLNLTGNQLSGYIPSSIGNLKNLDWLALARN 525 (973)
Q Consensus 446 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 525 (973)
+.+++++|+++ .+|..+. ++|+.|++++|+|++..|..|+++++|+.|+|++|+|++..+..|..+++|+.|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 45666666664 3343332 45555555555555444555555555555555555555433334455555555555555
Q ss_pred ccccCCCCCcccccccccccccccccC
Q 048430 526 AFQGPIPQSFGSLISLQSLDLSGNNIS 552 (973)
Q Consensus 526 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 552 (973)
+|++..+..|..+++|++|+|++|++.
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcc
Confidence 555433334555555555555555554
No 398
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.42 E-value=5e-13 Score=131.29 Aligned_cols=108 Identities=23% Similarity=0.218 Sum_probs=85.3
Q ss_pred CCeeeccCCCCCCCCcccccccccccEEEecCCcccCCcCcCccCCCCCCeEEccCCcCcccCCcccccCCcCCEEEccc
Q 048430 445 LRHLDFRSNSLNSTIPSTFWSLKYILAVDFSLNSLSGSLPLNIGNLEALGGLNLTGNQLSGYIPSSIGNLKNLDWLALAR 524 (973)
Q Consensus 445 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 524 (973)
.+.+++++|+++. +|..+ .++|+.|++++|+|++..|..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++
T Consensus 11 ~~~l~~s~n~l~~-ip~~~--~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLAS-VPTGI--PTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCSS-CCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcCc-cCccC--CCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 4677777777764 45444 26777888888888877777888888888888888888876666778888888888888
Q ss_pred CccccCCCCCcccccccccccccccccCCCC
Q 048430 525 NAFQGPIPQSFGSLISLQSLDLSGNNISGEI 555 (973)
Q Consensus 525 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 555 (973)
|+|++..+..|..+++|++|+|++|.+++..
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c 118 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDCAC 118 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCTTB
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCCCc
Confidence 8888777777888888999999999888653
No 399
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.41 E-value=1e-12 Score=129.46 Aligned_cols=104 Identities=25% Similarity=0.363 Sum_probs=77.1
Q ss_pred EEEecCCCCCCCcCCCCCCCCCCCcEEEecCCCCCCCCCcccccccCCcEEEccCCCCCCCCCccccCCCCCccEEEeeC
Q 048430 48 AALSLPNLSLGGTLPPHVGNLSFLVSLNISGNSFYDTLPNELWHMRRLKIIDFSSNSLSGSLPGDMCNSFTQLESFDVSS 127 (973)
Q Consensus 48 ~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~~l~~L~~L~Ls~ 127 (973)
+.+++++++++ .+|..+. +.|++|+|++|++.+..|..|+++++|++|+|++|+|+ .+|..+|..+++|++|+|++
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLT-AIPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCC-ccChhHhCCcchhhEEECCC
Confidence 35677777774 6777664 77888888888887777777888888888888888887 56766667777777777777
Q ss_pred cccCCCCCccccCCCCCCeEEccCcccc
Q 048430 128 NKITGEFPSAIVNISSLKSIRLDNNSLS 155 (973)
Q Consensus 128 N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 155 (973)
|+|++..+..|.++++|++|+|++|.+.
T Consensus 91 N~l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 91 NHLKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp SCCCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred CccceeCHHHhccccCCCEEEeCCCCcc
Confidence 7777555455777777777777777776
No 400
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.29 E-value=2.1e-10 Score=129.33 Aligned_cols=131 Identities=11% Similarity=0.174 Sum_probs=56.0
Q ss_pred CCCCCCcccEEEeecCccccccCcccCCCCCCCEEEccCCcCCCCCchhhhccCcCCeeecCCccccCcCcccccCcCCC
Q 048430 366 GFGNLSNLLVLSLVNNELAGAIPTVLGKLQKLQGLDLNSNKLKGFIPTDLCKLEKLNTLLSNNNALQGQIPTCLANLTSL 445 (973)
Q Consensus 366 ~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L 445 (973)
+|.++..|+.+.+.++-.. +...+|.++++|+.+.+. +.++.+....|.++.+|+.+.+..+ ++.+...+|.++++|
T Consensus 260 aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L 336 (394)
T 4gt6_A 260 AFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQL 336 (394)
T ss_dssp TTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTC
T ss_pred eeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCC
Confidence 4555555555555444332 444455555555555554 2333233334444445554444432 332333344444444
Q ss_pred CeeeccCCCCCCCCcccccccccccEEEecCCcccCCcCcCccCCCCCCeEEccCCcCcccCCcccccCCcCCEEEcccC
Q 048430 446 RHLDFRSNSLNSTIPSTFWSLKYILAVDFSLNSLSGSLPLNIGNLEALGGLNLTGNQLSGYIPSSIGNLKNLDWLALARN 525 (973)
Q Consensus 446 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 525 (973)
+ .+.+..+ ++.....+|.++.+|+.+++.+|.... ..+....+|+.+.+..|
T Consensus 337 ~------------------------~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~~---~~~~~~~~L~~i~i~~~ 388 (394)
T 4gt6_A 337 E------------------------RIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQW---NAISTDSGLQNLPVAPG 388 (394)
T ss_dssp C------------------------EEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHHH---HTCBCCCCC--------
T ss_pred C------------------------EEEECcc-cCEEhHhHhhCCCCCCEEEECCceeeh---hhhhccCCCCEEEeCCC
Confidence 4 4444332 332333445555555555555554331 23444555555555544
Q ss_pred cc
Q 048430 526 AF 527 (973)
Q Consensus 526 ~l 527 (973)
.+
T Consensus 389 ~~ 390 (394)
T 4gt6_A 389 SI 390 (394)
T ss_dssp --
T ss_pred CE
Confidence 43
No 401
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.26 E-value=7.2e-14 Score=155.46 Aligned_cols=66 Identities=20% Similarity=0.188 Sum_probs=32.7
Q ss_pred cCCCCCCeEEccCCcCccc----CCcccccCCcCCEEEcccCccccC----CCCCcccccccccccccccccCC
Q 048430 488 GNLEALGGLNLTGNQLSGY----IPSSIGNLKNLDWLALARNAFQGP----IPQSFGSLISLQSLDLSGNNISG 553 (973)
Q Consensus 488 ~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~ 553 (973)
..+++|++|+|++|+|++. ++..+...++|+.|+|++|.|+.. ++..+...++|++|||++|.|+.
T Consensus 180 ~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~ 253 (372)
T 3un9_A 180 AGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSS 253 (372)
T ss_dssp HTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCH
T ss_pred hcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCH
Confidence 4445555555555555422 233444455555566665555432 22223334555666666665553
No 402
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.25 E-value=7.3e-14 Score=155.38 Aligned_cols=166 Identities=18% Similarity=0.147 Sum_probs=124.2
Q ss_pred CCcccEEEeecCccccccCcccCC-----CCCCCEEEccCCcCCCCCchhhh-ccCcCCeeecCCccccCcCccccc---
Q 048430 370 LSNLLVLSLVNNELAGAIPTVLGK-----LQKLQGLDLNSNKLKGFIPTDLC-KLEKLNTLLSNNNALQGQIPTCLA--- 440 (973)
Q Consensus 370 l~~L~~L~Ls~n~l~~~~p~~~~~-----l~~L~~L~Ls~N~l~~~~~~~~~-~l~~L~~L~l~~N~l~~~~~~~~~--- 440 (973)
++.|+.|+|++|.++......+.. .++|++|+|++|.++......+. .+++|+.|+|++|.++......+.
T Consensus 71 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L 150 (372)
T 3un9_A 71 LSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLL 150 (372)
T ss_dssp HTTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHH
T ss_pred HhhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHH
Confidence 357889999999988544433332 26899999999998754333333 467899999999999865555442
Q ss_pred --CcCCCCeeeccCCCCCC----CCcccccccccccEEEecCCcccCC----cCcCccCCCCCCeEEccCCcCccc----
Q 048430 441 --NLTSLRHLDFRSNSLNS----TIPSTFWSLKYILAVDFSLNSLSGS----LPLNIGNLEALGGLNLTGNQLSGY---- 506 (973)
Q Consensus 441 --~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~---- 506 (973)
..++|++|+|++|.|+. .++..+...++|++|||++|.|++. ++..+...++|+.|+|++|.|++.
T Consensus 151 ~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~ 230 (372)
T 3un9_A 151 LHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALA 230 (372)
T ss_dssp HSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHH
T ss_pred HhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHH
Confidence 45789999999999864 2444557788999999999999853 255667788999999999999853
Q ss_pred CCcccccCCcCCEEEcccCccccCCCCCc
Q 048430 507 IPSSIGNLKNLDWLALARNAFQGPIPQSF 535 (973)
Q Consensus 507 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 535 (973)
++..+...+.|+.|+|++|.|+......+
T Consensus 231 l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L 259 (372)
T 3un9_A 231 LARAAREHPSLELLHLYFNELSSEGRQVL 259 (372)
T ss_dssp HHHHHHHCSSCCEEECTTSSCCHHHHHHH
T ss_pred HHHHHHhCCCCCEEeccCCCCCHHHHHHH
Confidence 34455667999999999999985444333
No 403
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.24 E-value=8.4e-12 Score=138.33 Aligned_cols=133 Identities=19% Similarity=0.129 Sum_probs=99.0
Q ss_pred CeeeccCC-CCCCCCcccccccccccEEEecC-CcccCCcCcCccCCCCCCeEEccCCcCcccCCcccccCCcCCEEEcc
Q 048430 446 RHLDFRSN-SLNSTIPSTFWSLKYILAVDFSL-NSLSGSLPLNIGNLEALGGLNLTGNQLSGYIPSSIGNLKNLDWLALA 523 (973)
Q Consensus 446 ~~L~L~~N-~l~~~~p~~~~~l~~L~~L~ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 523 (973)
..++++++ +|++ +|. +..+++|+.|+|++ |+|++..+..|+++++|+.|+|++|+|++..|..|+++++|+.|+|+
T Consensus 11 ~~v~~~~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 11 SGLRCTRDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp SCEECCSSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CEEEcCCCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 45688887 7874 666 88888899999986 88887777788889999999999999988888888889999999999
Q ss_pred cCccccCCCCCcccccccccccccccccCCCCC-ccccccccccccccCCCcccccCCC
Q 048430 524 RNAFQGPIPQSFGSLISLQSLDLSGNNISGEIP-KSLEKLSRLVDFNVSFNGLEGEIPS 581 (973)
Q Consensus 524 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~l~ls~N~l~~~~p~ 581 (973)
+|+|++..+..|..+. |+.|+|++|++...-. .+|..+.+.....+..+.+.+.-|.
T Consensus 89 ~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c~c~l~~~~~~~~~~~~~l~~~~~~C~~~~ 146 (347)
T 2ifg_A 89 FNALESLSWKTVQGLS-LQELVLSGNPLHCSCALRWLQRWEEEGLGGVPEQKLQCHGQG 146 (347)
T ss_dssp SSCCSCCCSTTTCSCC-CCEEECCSSCCCCCGGGHHHHHHHHTTCSSCGGGCCCCSSSS
T ss_pred CCccceeCHHHcccCC-ceEEEeeCCCccCCCccHHHHHHHHhCcccccccCCCCCCCh
Confidence 9999866666676665 8899999998875432 2333333333344444555555554
No 404
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.23 E-value=3.6e-10 Score=127.40 Aligned_cols=334 Identities=11% Similarity=0.159 Sum_probs=169.3
Q ss_pred CccccCCC-CCCeEEccCccccccCCccccCCCCCccEEEcccccccccCCCCCC-CccccCCCCccEEEecCCcccCcc
Q 048430 135 PSAIVNIS-SLKSIRLDNNSLSGSFPTDLCTRLPSLVQLRLLGNNITGRIPNREI-PNEIGNLHNLKILDLGGNNIAGLI 212 (973)
Q Consensus 135 p~~~~~l~-~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~-p~~l~~l~~L~~L~L~~N~l~~~~ 212 (973)
..+|.++. .|+.+.+..+ ++ .|...+|.++.+|+.+.+..|.-+.. ..+ ..+|.++.+|+.+.+..+ ++...
T Consensus 56 ~~aF~~~~~~L~sI~iP~s-vt-~Ig~~AF~~C~~L~~i~~~~n~p~~l---~~Ig~~aF~~c~~L~~i~~~~~-~~~I~ 129 (394)
T 4gt6_A 56 DRVFCNYKYVLTSVQIPDT-VT-EIGSNAFYNCTSLKRVTIQDNKPSCV---KKIGRQAFMFCSELTDIPILDS-VTEID 129 (394)
T ss_dssp TTTTTTCCSCCCEEEECTT-CC-EECTTTTTTCTTCCEEEEGGGCCCCC---CEECTTTTTTCTTCCBCGGGTT-CSEEC
T ss_pred HhhccCCCCcCEEEEECCC-ee-EEhHHHhhCCccCceEeecCCCCCee---eEechhhchhcccceeeccCCc-cceeh
Confidence 45676664 5888888654 55 77777777778888887776642110 011 234666666666665543 33333
Q ss_pred ccccccCCcceeEEeecccccccCCCCCCccccceeeeccccccccCcchhcccCcccEEEeccccccccCCCccccccc
Q 048430 213 PSMIFNNSNMVAILLYGNHLSGHLPSSIYLPNLENLFLWKNNLSGIIPDSICNASEATILELSSNLFSGLVPNTFGNCRQ 292 (973)
Q Consensus 213 ~~~~~~~~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~ 292 (973)
..+|..+. +|+.+.+..+ +..+....|..+..|+.+.+..+ +..+...+|.+ .+
T Consensus 130 ~~aF~~c~-----------------------~L~~i~lp~~-~~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~~-~~ 183 (394)
T 4gt6_A 130 SEAFHHCE-----------------------ELDTVTIPEG-VTSVADGMFSYCYSLHTVTLPDS-VTAIEERAFTG-TA 183 (394)
T ss_dssp TTTTTTCT-----------------------TCCEEECCTT-CCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTT-CC
T ss_pred hhhhhhhc-----------------------ccccccccce-eeeecccceecccccccccccce-eeEeccccccc-cc
Confidence 44455544 4444444322 22233445555555555555433 33344444543 34
Q ss_pred ceEEEccCCcCCCCCCCcchhhhhhhccCCcCcEEEccCCCCCCCCCCcccccccccceeecccCCccccCCCCCCCCCc
Q 048430 293 LQILSLGDNQLTTGSSAQGQIFYSSLAKCRYLRVLVLDTNPLKGVIPNSIGNLSTSLENFYAGSSQLSGGIPVGFGNLSN 372 (973)
Q Consensus 293 L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~l~~l~l~~n~l~~~~p~~~~~l~~ 372 (973)
|+.+.+..+-.. +....+..+..++......+..... ...+... +.........+.....
T Consensus 184 l~~i~ip~~~~~--------i~~~af~~c~~l~~~~~~~~~~~~~-~~~~~~~-----------~~~~~~~~~~~~~~~~ 243 (394)
T 4gt6_A 184 LTQIHIPAKVTR--------IGTNAFSECFALSTITSDSESYPAI-DNVLYEK-----------SANGDYALIRYPSQRE 243 (394)
T ss_dssp CSEEEECTTCCE--------ECTTTTTTCTTCCEEEECCSSSCBS-SSCEEEE-----------CTTSCEEEEECCTTCC
T ss_pred eeEEEECCcccc--------cccchhhhccccceecccccccccc-cceeecc-----------cccccccccccccccc
Confidence 555555433221 1123344555555555444333211 1110000 0000000000111122
Q ss_pred ccEEEeecCccccccCcccCCCCCCCEEEccCCcCCCCCchhhhccCcCCeeecCCccccCcCcccccCcCCCCeeeccC
Q 048430 373 LLVLSLVNNELAGAIPTVLGKLQKLQGLDLNSNKLKGFIPTDLCKLEKLNTLLSNNNALQGQIPTCLANLTSLRHLDFRS 452 (973)
Q Consensus 373 L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~ 452 (973)
+..+.+. +.++.....+|..+.+|+.+.+ .++... ....+|.++++|+.+.+.
T Consensus 244 ~~~~~ip-~~v~~i~~~aF~~c~~L~~i~l------------------------p~~~~~-I~~~aF~~c~~L~~i~l~- 296 (394)
T 4gt6_A 244 DPAFKIP-NGVARIETHAFDSCAYLASVKM------------------------PDSVVS-IGTGAFMNCPALQDIEFS- 296 (394)
T ss_dssp CSEEECC-TTEEEECTTTTTTCSSCCEEEC------------------------CTTCCE-ECTTTTTTCTTCCEEECC-
T ss_pred cceEEcC-CcceEcccceeeecccccEEec------------------------ccccce-ecCcccccccccccccCC-
Confidence 2222222 1222233344444444544444 433222 334455556666666664
Q ss_pred CCCCCCCcccccccccccEEEecCCcccCCcCcCccCCCCCCeEEccCCcCcccCCcccccCCcCCEEEcccCccccCCC
Q 048430 453 NSLNSTIPSTFWSLKYILAVDFSLNSLSGSLPLNIGNLEALGGLNLTGNQLSGYIPSSIGNLKNLDWLALARNAFQGPIP 532 (973)
Q Consensus 453 N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 532 (973)
+.++.....+|.++.+|+.+++..+ ++.....+|.++.+|+.+.|..+ ++..-...|.++++|+.+++.+|....
T Consensus 297 ~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~~--- 371 (394)
T 4gt6_A 297 SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQW--- 371 (394)
T ss_dssp TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHHH---
T ss_pred CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceeeh---
Confidence 3344444556666667777776654 44455678999999999999765 664556789999999999999987652
Q ss_pred CCcccccccccccccccccC
Q 048430 533 QSFGSLISLQSLDLSGNNIS 552 (973)
Q Consensus 533 ~~~~~l~~L~~L~Ls~N~l~ 552 (973)
..|....+|+.+.+..|.+.
T Consensus 372 ~~~~~~~~L~~i~i~~~~~~ 391 (394)
T 4gt6_A 372 NAISTDSGLQNLPVAPGSID 391 (394)
T ss_dssp HTCBCCCCC-----------
T ss_pred hhhhccCCCCEEEeCCCCEE
Confidence 46788889999999887654
No 405
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.22 E-value=1.4e-11 Score=136.66 Aligned_cols=132 Identities=16% Similarity=0.099 Sum_probs=84.3
Q ss_pred eeecCCc-cccCcCcccccCcCCCCeeeccC-CCCCCCCcccccccccccEEEecCCcccCCcCcCccCCCCCCeEEccC
Q 048430 423 TLLSNNN-ALQGQIPTCLANLTSLRHLDFRS-NSLNSTIPSTFWSLKYILAVDFSLNSLSGSLPLNIGNLEALGGLNLTG 500 (973)
Q Consensus 423 ~L~l~~N-~l~~~~~~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 500 (973)
.++++++ .++. +|. +..+++|++|+|++ |+|++..+..|..+++|+.|+|++|+|++..|..|.++++|+.|+|++
T Consensus 12 ~v~~~~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 4566666 6663 555 77777777777775 777766667777777777777777777776677777777777777777
Q ss_pred CcCcccCCcccccCCcCCEEEcccCccccCCC-CCcccccccccccccccccCCCCCc
Q 048430 501 NQLSGYIPSSIGNLKNLDWLALARNAFQGPIP-QSFGSLISLQSLDLSGNNISGEIPK 557 (973)
Q Consensus 501 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~ 557 (973)
|+|++..+..|..++ |+.|+|++|.+...-. .+|..+.......+..++++...|.
T Consensus 90 N~l~~~~~~~~~~~~-L~~l~l~~N~~~c~c~l~~~~~~~~~~~~~l~~~~~~C~~~~ 146 (347)
T 2ifg_A 90 NALESLSWKTVQGLS-LQELVLSGNPLHCSCALRWLQRWEEEGLGGVPEQKLQCHGQG 146 (347)
T ss_dssp SCCSCCCSTTTCSCC-CCEEECCSSCCCCCGGGHHHHHHHHTTCSSCGGGCCCCSSSS
T ss_pred CccceeCHHHcccCC-ceEEEeeCCCccCCCccHHHHHHHHhCcccccccCCCCCCCh
Confidence 777755555555555 7777777777764322 1222222233334444555554444
No 406
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.13 E-value=1.1e-10 Score=123.77 Aligned_cols=148 Identities=16% Similarity=0.132 Sum_probs=116.0
Q ss_pred HHHHHhcCCCCCccccccCceEEEEEEeCCCeEEEEEEEeccchhhHHHHHHHHHHHHhcc-CCceeEEEeeeecCCeeE
Q 048430 674 ELQQATNGFGESNLLGSGSFDNVYKATLANGVSVAVKVFNLQEDRALKSFDTECEVMRRIR-HRNLIKIVSSCSNPGFKA 752 (973)
Q Consensus 674 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~ 752 (973)
.+.....+|......+.|+.+.||++... ++.+++|+...........+.+|+++++.+. +..+.++++++...+..+
T Consensus 8 ~l~~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~ 86 (263)
T 3tm0_A 8 ELKKLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSN 86 (263)
T ss_dssp HHHHHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEE
T ss_pred HHHHHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceE
Confidence 34455677888888898999999999865 6899999986532222346889999999985 677888999998888999
Q ss_pred EEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhc------------------------------------
Q 048430 753 LIMQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHG------------------------------------ 796 (973)
Q Consensus 753 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~------------------------------------ 796 (973)
+||||++|.++.+.+.. ......++.+++++++.||.-
T Consensus 87 lv~e~i~G~~l~~~~~~------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (263)
T 3tm0_A 87 LLMSEADGVLCSEEYED------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEE 160 (263)
T ss_dssp EEEECCSSEEHHHHCCT------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGST
T ss_pred EEEEecCCeehhhccCC------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccc
Confidence 99999999999876421 122347889999999999951
Q ss_pred --------------------CCCCeEEccCCCCcEEeCCCCcEEEeeccccc
Q 048430 797 --------------------YSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAK 828 (973)
Q Consensus 797 --------------------~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~ 828 (973)
....++|+|+++.||+++++..+.|+||+.+.
T Consensus 161 ~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 161 DTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp TCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred cccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 01448999999999999877667899999875
No 407
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=98.99 E-value=5e-10 Score=118.52 Aligned_cols=137 Identities=16% Similarity=0.151 Sum_probs=101.2
Q ss_pred CCCCCccccccCceEEEEEEeCCCeEEEEEEEeccchhhHHHHHHHHHHHHhccCCc--eeEEEeeeecCCeeEEEEEec
Q 048430 681 GFGESNLLGSGSFDNVYKATLANGVSVAVKVFNLQEDRALKSFDTECEVMRRIRHRN--LIKIVSSCSNPGFKALIMQYM 758 (973)
Q Consensus 681 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~l~~~~~~~~~~~lv~e~~ 758 (973)
++....+.+.|..+.||++...+|+.+++|+.... ....+.+|+.+++.+.+.+ +.+++++...++..++||||+
T Consensus 21 ~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i 97 (264)
T 1nd4_A 21 GYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEV 97 (264)
T ss_dssp TCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECC
T ss_pred CCceEecccCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEec
Confidence 44433333455669999998877888999987543 2246788999999986544 556888888778889999999
Q ss_pred CCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcC-----------------------------------------
Q 048430 759 PQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGY----------------------------------------- 797 (973)
Q Consensus 759 ~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~----------------------------------------- 797 (973)
+|.++. ... .+ ...++.++++.+..||...
T Consensus 98 ~G~~l~--~~~----~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (264)
T 1nd4_A 98 PGQDLL--SSH----LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPA 168 (264)
T ss_dssp SSEETT--TSC----CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHH
T ss_pred CCcccC--cCc----CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHH
Confidence 998884 211 12 2367888888899998421
Q ss_pred --------------CCCeEEccCCCCcEEeCCCCcEEEeecccccc
Q 048430 798 --------------STPIIHCDLKPNNVLLDDDMVAHLGDFGIAKL 829 (973)
Q Consensus 798 --------------~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~ 829 (973)
...++|+|++|.||+++++..+.|+|||.+..
T Consensus 169 ~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 169 ELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp HHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 01299999999999998876678999998763
No 408
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.96 E-value=4.2e-08 Score=109.82 Aligned_cols=45 Identities=11% Similarity=0.153 Sum_probs=19.5
Q ss_pred CCccEEEeeCcccCCCCCccccCCCCCCeEEccCccccccCCccccCC
Q 048430 118 TQLESFDVSSNKITGEFPSAIVNISSLKSIRLDNNSLSGSFPTDLCTR 165 (973)
Q Consensus 118 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~ 165 (973)
.+|+.+.+... ++..-..+|.++.+|+.+.|..+ ++ .|+..+|.+
T Consensus 46 ~~i~~v~ip~~-vt~Ig~~aF~~C~~L~~I~lp~~-v~-~Ig~~aF~~ 90 (379)
T 4h09_A 46 DRISEVRVNSG-ITSIGEANFNSCYNMTKVTVAST-VT-SIGDGAFAD 90 (379)
T ss_dssp GGCSEEEECTT-EEEECTTTTTTCTTCCEEEECTT-CC-EECTTTTTT
T ss_pred cCCEEEEeCCC-ccChHHHHhhCCCCCCEEEeCCc-ce-EechhhhcC
Confidence 44555554432 33233344555555555555432 33 444444443
No 409
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.93 E-value=7.5e-08 Score=107.77 Aligned_cols=285 Identities=9% Similarity=0.027 Sum_probs=122.6
Q ss_pred ccccceeeeccccccccCcchhcccCcccEEEeccccccccCCCcccccccceEEEccCCcCCCCCCCcchhhhhhhccC
Q 048430 242 LPNLENLFLWKNNLSGIIPDSICNASEATILELSSNLFSGLVPNTFGNCRQLQILSLGDNQLTTGSSAQGQIFYSSLAKC 321 (973)
Q Consensus 242 l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l 321 (973)
..+|+.+.+.. .++.+...+|.++++|+.++|..+ ++.+...+|.++ +|+.+.+..+ ++.+. ...+..+
T Consensus 45 ~~~i~~v~ip~-~vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~-------~~aF~~~ 113 (379)
T 4h09_A 45 RDRISEVRVNS-GITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFG-------DYVFQGT 113 (379)
T ss_dssp GGGCSEEEECT-TEEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEEC-------TTTTTTC
T ss_pred ccCCEEEEeCC-CccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEec-------cceeccC
Confidence 34566666643 355555666777777777777543 666666677666 5666665433 33221 1223333
Q ss_pred CcCcEEEccCCCCCCCCCCcccccccccceeecccCCccccCCCCCCCCCcccEEEeecCcccc------------ccCc
Q 048430 322 RYLRVLVLDTNPLKGVIPNSIGNLSTSLENFYAGSSQLSGGIPVGFGNLSNLLVLSLVNNELAG------------AIPT 389 (973)
Q Consensus 322 ~~L~~L~L~~N~l~~~~p~~~~~l~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~------------~~p~ 389 (973)
+|+.+.+..+- .......+.+. .+....+- ..++..-...|..+.+++.+.+..+.... ....
T Consensus 114 -~L~~i~lp~~~-~~i~~~~F~~~--~l~~~~~~-~~v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (379)
T 4h09_A 114 -DLDDFEFPGAT-TEIGNYIFYNS--SVKRIVIP-KSVTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILE 188 (379)
T ss_dssp -CCSEEECCTTC-CEECTTTTTTC--CCCEEEEC-TTCCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEE
T ss_pred -CcccccCCCcc-ccccccccccc--eeeeeecc-ceeeccccchhcccccccccccccccceeecccceecccccceec
Confidence 56666665432 21112222111 12222211 11222233345555555555554433221 1111
Q ss_pred ccCCCCCCCEEEccCCcCCCCCchhhhccCcCCeeecCCccccCcCcccccCcCCCCeeeccCCCCCCCCcccccccccc
Q 048430 390 VLGKLQKLQGLDLNSNKLKGFIPTDLCKLEKLNTLLSNNNALQGQIPTCLANLTSLRHLDFRSNSLNSTIPSTFWSLKYI 469 (973)
Q Consensus 390 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 469 (973)
.+.....+..+.+..+... .....+....+|+.+.+..+ +......+|.++..|+.+.+..+ ++..-...|.....|
T Consensus 189 ~~~~~~~~~~~~~~~~~~~-i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l 265 (379)
T 4h09_A 189 SYPAAKTGTEFTIPSTVKT-VTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTAL 265 (379)
T ss_dssp ECCTTCCCSEEECCTTCCE-ECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTC
T ss_pred cccccccccccccccceeE-Eeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehh
Confidence 2223333333333332221 22333444444444444333 22233334444455555554433 333333444444444
Q ss_pred cEEEecCCcccCCcCcCccCCCCCCeEEccCCcCcccCCcccccCCcCCEEEcccCccccCCCCCccccccccccccc
Q 048430 470 LAVDFSLNSLSGSLPLNIGNLEALGGLNLTGNQLSGYIPSSIGNLKNLDWLALARNAFQGPIPQSFGSLISLQSLDLS 547 (973)
Q Consensus 470 ~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 547 (973)
+.+.+..+ ++......|.++.+|+.+.+.++.++......|.++.+|+.+.|..+ ++.+-..+|.++.+|+.+.+.
T Consensus 266 ~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip 341 (379)
T 4h09_A 266 KTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYP 341 (379)
T ss_dssp CEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCC
T ss_pred cccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEEC
Confidence 44444332 22222333444444444444444444333334444444444444332 332333444444444444443
No 410
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.91 E-value=7.5e-10 Score=121.82 Aligned_cols=58 Identities=21% Similarity=0.316 Sum_probs=26.8
Q ss_pred CCCCCccEEEeeCcccCCCCCccccCCCCCCeEEccCccccccCCcccc-CCCCCccEEEcc
Q 048430 115 NSFTQLESFDVSSNKITGEFPSAIVNISSLKSIRLDNNSLSGSFPTDLC-TRLPSLVQLRLL 175 (973)
Q Consensus 115 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~-~~l~~L~~L~L~ 175 (973)
..+|+|+.|+|++|.-. .+|. +. +++|++|+|..|.+.......+. ..+|+|++|+|+
T Consensus 169 ~~~P~L~~L~L~g~~~l-~l~~-~~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~ 227 (362)
T 2ra8_A 169 DAMPLLNNLKIKGTNNL-SIGK-KP-RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLY 227 (362)
T ss_dssp HTCTTCCEEEEECCBTC-BCCS-CB-CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEE
T ss_pred hcCCCCcEEEEeCCCCc-eecc-cc-CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEe
Confidence 44556666666555211 1222 22 55666666665555422111111 245555555553
No 411
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.85 E-value=6e-10 Score=122.59 Aligned_cols=159 Identities=15% Similarity=0.172 Sum_probs=94.8
Q ss_pred CchhhhccCcCCeeecCCccccCcCcccccCcCCCCeeeccCCCCCCCCccccc--ccccccEEEecC--CcccCC----
Q 048430 411 IPTDLCKLEKLNTLLSNNNALQGQIPTCLANLTSLRHLDFRSNSLNSTIPSTFW--SLKYILAVDFSL--NSLSGS---- 482 (973)
Q Consensus 411 ~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~--~l~~L~~L~ls~--N~l~~~---- 482 (973)
+...+..+++|+.|.+++|.-. .++. +. +++|+.|+|..+.+.......+. .+++|+.|+|+. |...+.
T Consensus 164 L~~ll~~~P~L~~L~L~g~~~l-~l~~-~~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~ 240 (362)
T 2ra8_A 164 LSPVLDAMPLLNNLKIKGTNNL-SIGK-KP-RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMN 240 (362)
T ss_dssp CHHHHHTCTTCCEEEEECCBTC-BCCS-CB-CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGG
T ss_pred HHHHHhcCCCCcEEEEeCCCCc-eecc-cc-CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHH
Confidence 3445556667777777665211 1222 22 56777777777766433222333 567777777653 221111
Q ss_pred -cCcCc--cCCCCCCeEEccCCcCcccCCcccc---cCCcCCEEEcccCccccC----CCCCcccccccccccccccccC
Q 048430 483 -LPLNI--GNLEALGGLNLTGNQLSGYIPSSIG---NLKNLDWLALARNAFQGP----IPQSFGSLISLQSLDLSGNNIS 552 (973)
Q Consensus 483 -~p~~~--~~l~~L~~L~Ls~N~l~~~~p~~~~---~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~ 552 (973)
+...+ ..+++|+.|+|++|.+++..+..+. .+++|+.|+|+.|.+++. ++..+..+++|+.|+|++|.|+
T Consensus 241 ~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~ 320 (362)
T 2ra8_A 241 VFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLS 320 (362)
T ss_dssp GTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCC
T ss_pred HHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCC
Confidence 11112 2468899999988888754433332 478899999999988763 4555567788999999999887
Q ss_pred CCCCccccc-cccccccccCCCc
Q 048430 553 GEIPKSLEK-LSRLVDFNVSFNG 574 (973)
Q Consensus 553 ~~~p~~~~~-l~~L~~l~ls~N~ 574 (973)
...-..+.. + ...+++++|+
T Consensus 321 d~~~~~l~~al--g~~~~~~~~~ 341 (362)
T 2ra8_A 321 DEMKKELQKSL--PMKIDVSDSQ 341 (362)
T ss_dssp HHHHHHHHHHC--CSEEECCSBC
T ss_pred HHHHHHHHHHc--CCEEEecCCc
Confidence 433333332 2 2457787776
No 412
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.80 E-value=1e-08 Score=113.93 Aligned_cols=142 Identities=15% Similarity=0.218 Sum_probs=107.0
Q ss_pred CCccccccCceEEEEEEeCCCeEEEEEEEe--ccc-hhhHHHHHHHHHHHHhcc--CCceeEEEeeeecC---CeeEEEE
Q 048430 684 ESNLLGSGSFDNVYKATLANGVSVAVKVFN--LQE-DRALKSFDTECEVMRRIR--HRNLIKIVSSCSNP---GFKALIM 755 (973)
Q Consensus 684 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~--~~~-~~~~~~~~~e~~~l~~l~--h~niv~l~~~~~~~---~~~~lv~ 755 (973)
..+.++.|.++.||+....+ ..+++|+.. ... ......+.+|+++++.+. +..+.+++.++.+. +..++||
T Consensus 42 ~~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vm 120 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIM 120 (359)
T ss_dssp EEEECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEE
T ss_pred eEEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEE
Confidence 45789999999999998764 578888765 222 122356888999999997 45678888888766 4589999
Q ss_pred EecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcC--------------------------------------
Q 048430 756 QYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGY-------------------------------------- 797 (973)
Q Consensus 756 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~-------------------------------------- 797 (973)
||++|..+.+.. ...++..++..++.++++.|+.||...
T Consensus 121 e~v~G~~l~~~~---~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (359)
T 3dxp_A 121 EFVSGRVLWDQS---LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAM 197 (359)
T ss_dssp ECCCCBCCCCTT---CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHH
T ss_pred EecCCeecCCCc---cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHH
Confidence 999997774421 124678888999999999999999510
Q ss_pred -----------------CCCeEEccCCCCcEEeCCCCc--EEEeecccccc
Q 048430 798 -----------------STPIIHCDLKPNNVLLDDDMV--AHLGDFGIAKL 829 (973)
Q Consensus 798 -----------------~~~ivH~dlk~~Nill~~~~~--~kl~Dfgla~~ 829 (973)
...++|+|+++.||+++.++. +.++||+.+..
T Consensus 198 ~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 198 DSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 256899999999999997753 68999998875
No 413
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.78 E-value=8.6e-11 Score=122.41 Aligned_cols=168 Identities=20% Similarity=0.198 Sum_probs=95.5
Q ss_pred CcceEEEEEeeCCCCcEEEEecCC---CCCCCcCCCC-CCCCCCCcEEEecCCCCCCCCCc-ccccccCCcE--EEccCC
Q 048430 31 SVCNWVGVTCSIRHGRVAALSLPN---LSLGGTLPPH-VGNLSFLVSLNISGNSFYDTLPN-ELWHMRRLKI--IDFSSN 103 (973)
Q Consensus 31 ~~c~w~gv~C~~~~~~v~~l~l~~---~~l~g~~~~~-l~~l~~L~~L~L~~n~~~~~~p~-~~~~l~~L~~--L~Ls~n 103 (973)
..|+|.|+.|+....+|+.+...+ ..+.|.++++ +..|+. .|....|...+.++- .+...+.|+. ++++.|
T Consensus 76 ~l~~~~g~i~~~~~~ki~~~v~~~~~~~~~~~~l~~~~~~~Lk~--~l~~ryn~~~~~LdLs~l~~dp~L~~~~l~l~~N 153 (267)
T 3rw6_A 76 ALKAVNYKILDRENRRISIIINSSAPPHTILNELKPEQVEQLKL--IMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLN 153 (267)
T ss_dssp HHHHTTSSCBCTTSCBCCCEEEECCCCHHHHTSCCHHHHHHHHH--HHHHTEETTTTEEECTTGGGCHHHHHTTCCCCTT
T ss_pred HHHhcCcEEECCCCCEEEEEEecCCCcccccccCCHHHHHHHHH--HHHhccchhccccCHHHcCCCcchhhcCccccCC
Confidence 348999999998777887776655 3444555432 222221 111222222222221 1444445554 566666
Q ss_pred CCCCCCCc---cccCCCCCccEEEeeCcccCC--CCCccccCCCCCCeEEccCccccccCCccccCCCCCccEEEccccc
Q 048430 104 SLSGSLPG---DMCNSFTQLESFDVSSNKITG--EFPSAIVNISSLKSIRLDNNSLSGSFPTDLCTRLPSLVQLRLLGNN 178 (973)
Q Consensus 104 ~l~~~~p~---~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~L~~N~ 178 (973)
... .++. -+...+++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++.-..+.+..+ +|++|+|++|.
T Consensus 154 ~~~-~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~~~l~~l~~l-~L~~L~L~~Np 231 (267)
T 3rw6_A 154 RRS-CMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGL-KLEELWLDGNS 231 (267)
T ss_dssp SHH-HHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSGGGGGGGTTS-CCSEEECTTST
T ss_pred HHH-HHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCchhhhhcccC-CcceEEccCCc
Confidence 433 2221 112457788888888888876 4456667788888888888888743122222333 78888888888
Q ss_pred ccccCCCC--CCCccccCCCCccEEE
Q 048430 179 ITGRIPNR--EIPNEIGNLHNLKILD 202 (973)
Q Consensus 179 l~~~~~~~--~~p~~l~~l~~L~~L~ 202 (973)
+++.+|.. .....+..+++|+.||
T Consensus 232 l~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 232 LCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp TGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred CccccCcchhHHHHHHHHCcccCeEC
Confidence 87543310 0012366778888775
No 414
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.77 E-value=5e-09 Score=113.41 Aligned_cols=186 Identities=18% Similarity=0.190 Sum_probs=123.7
Q ss_pred CccccccCceEEEEEEeCCCeEEEEEEEeccchhhHHHHHHHHHHHHhcc-CCc--eeEEEeeeecCC---eeEEEEEec
Q 048430 685 SNLLGSGSFDNVYKATLANGVSVAVKVFNLQEDRALKSFDTECEVMRRIR-HRN--LIKIVSSCSNPG---FKALIMQYM 758 (973)
Q Consensus 685 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~n--iv~l~~~~~~~~---~~~lv~e~~ 758 (973)
.+.++.|....||+.. ..+++|+.... .....+.+|+++++.+. +.. +.+++......+ ..++|||++
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i 98 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKI 98 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEccc
Confidence 4668999999999863 46888986432 33567889999998883 322 445555543332 457899999
Q ss_pred CCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhc------------------------------------------
Q 048430 759 PQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHG------------------------------------------ 796 (973)
Q Consensus 759 ~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~------------------------------------------ 796 (973)
+|.++.+.... .++..++..++.++++.++.||..
T Consensus 99 ~G~~l~~~~~~---~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 175 (304)
T 3sg8_A 99 KGVPLTPLLLN---NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDD 175 (304)
T ss_dssp CCEECCHHHHH---TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHHH
T ss_pred CCeECCccccc---cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHHH
Confidence 99888754332 467888888999999999999841
Q ss_pred -------------CCCCeEEccCCCCcEEeCC--CCcEEEeecccccccCCCCCccccc-------------cccccccc
Q 048430 797 -------------YSTPIIHCDLKPNNVLLDD--DMVAHLGDFGIAKLLDGVDPVTQTM-------------TLATIGYM 848 (973)
Q Consensus 797 -------------~~~~ivH~dlk~~Nill~~--~~~~kl~Dfgla~~~~~~~~~~~~~-------------~~~~~~y~ 848 (973)
....++|+|+++.||++++ +..+.++||+.+...++........ .....++.
T Consensus 176 ~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~~~ 255 (304)
T 3sg8_A 176 FYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYKHK 255 (304)
T ss_dssp HHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHHTCS
T ss_pred HHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHcCCC
Confidence 0134799999999999998 5568899999987643211100000 00000111
Q ss_pred C-ccCCCCCCCCcchhHHHHHHHHHHHHhCCCCC
Q 048430 849 A-PEYGSEGIVSISGDVYSFGILMMETFTRRKPT 881 (973)
Q Consensus 849 a-PE~~~~~~~~~~sDvws~Gvvl~elltg~~p~ 881 (973)
. |+... ......+.|++|.++|++.+|..+|
T Consensus 256 ~~~~~~~--r~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 256 DIPTVLE--KYRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp CHHHHHH--HHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred CcHHHHH--HHHHHHHHHHHHHHHHHHHcCCHHH
Confidence 1 22111 0122368999999999999998764
No 415
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.43 E-value=1.2e-08 Score=106.31 Aligned_cols=80 Identities=25% Similarity=0.394 Sum_probs=47.3
Q ss_pred cCCCCCCeEEccCCcCcc--cCCcccccCCcCCEEEcccCccccCCCCCccccc--ccccccccccccCCCCCc------
Q 048430 488 GNLEALGGLNLTGNQLSG--YIPSSIGNLKNLDWLALARNAFQGPIPQSFGSLI--SLQSLDLSGNNISGEIPK------ 557 (973)
Q Consensus 488 ~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~--~L~~L~Ls~N~l~~~~p~------ 557 (973)
.++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|+.|+|++|.+++.+|.
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~ 244 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYIS 244 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHH
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHH
Confidence 345666666666666665 3345556666666777776666643 2234444 666667777766655542
Q ss_pred -cccccccccccc
Q 048430 558 -SLEKLSRLVDFN 569 (973)
Q Consensus 558 -~~~~l~~L~~l~ 569 (973)
.+..+++|+.||
T Consensus 245 ~il~~~P~L~~LD 257 (267)
T 3rw6_A 245 AIRERFPKLLRLD 257 (267)
T ss_dssp HHHHHCTTCCEES
T ss_pred HHHHHCcccCeEC
Confidence 355566666654
No 416
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.41 E-value=1.1e-06 Score=95.57 Aligned_cols=137 Identities=21% Similarity=0.239 Sum_probs=103.3
Q ss_pred CCCCCccccccCceEEEEEEeCCCeEEEEEEEeccchhhHHHHHHHHHHHHhccC----CceeEEEeeeecCCeeEEEEE
Q 048430 681 GFGESNLLGSGSFDNVYKATLANGVSVAVKVFNLQEDRALKSFDTECEVMRRIRH----RNLIKIVSSCSNPGFKALIMQ 756 (973)
Q Consensus 681 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h----~niv~l~~~~~~~~~~~lv~e 756 (973)
.+...+.++.|....||+. ++.+++|+.... .....+.+|+++++.+.+ ..+.+++++ +..++|||
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~--~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme 107 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKRD--SVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMK 107 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESSH--HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEE
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCcH--HHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEe
Confidence 5666788999999999998 667888976432 223568899999998865 224455554 56789999
Q ss_pred ecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCC--------------------------------------
Q 048430 757 YMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYS-------------------------------------- 798 (973)
Q Consensus 757 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~-------------------------------------- 798 (973)
|++|.++...... .++..++..++.++++.++.||....
T Consensus 108 ~i~G~~l~~~~~~---~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (320)
T 3r70_A 108 YIKGERITYEQYH---KLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDE 184 (320)
T ss_dssp CCCCBCCCHHHHT---TSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCHH
T ss_pred ecCCccccccccc---cCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhccccccc
Confidence 9999888643322 46777788888899999988884211
Q ss_pred ----------------------CCeEEccCCCCcEEeCCCCcEEEeeccccccc
Q 048430 799 ----------------------TPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLL 830 (973)
Q Consensus 799 ----------------------~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~ 830 (973)
..++|+|++|.||+++.+..+.++||+.+...
T Consensus 185 ~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~ 238 (320)
T 3r70_A 185 MLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVG 238 (320)
T ss_dssp HHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEE
T ss_pred chHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccC
Confidence 23599999999999999767799999998653
No 417
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.27 E-value=1.5e-07 Score=93.17 Aligned_cols=47 Identities=9% Similarity=0.039 Sum_probs=25.2
Q ss_pred ccCcccCCCCCCCEEEccCC-cCCCCC----chhhhccCcCCeeecCCcccc
Q 048430 386 AIPTVLGKLQKLQGLDLNSN-KLKGFI----PTDLCKLEKLNTLLSNNNALQ 432 (973)
Q Consensus 386 ~~p~~~~~l~~L~~L~Ls~N-~l~~~~----~~~~~~l~~L~~L~l~~N~l~ 432 (973)
.+...+...++|++|+|++| .+.... ...+...++|++|+|++|.|.
T Consensus 27 ~l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~ 78 (185)
T 1io0_A 27 TLKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSN 78 (185)
T ss_dssp HHHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCC
T ss_pred HHHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCC
Confidence 34455666777777777777 666321 222333344555555555444
No 418
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.26 E-value=1.9e-07 Score=92.43 Aligned_cols=91 Identities=20% Similarity=0.169 Sum_probs=65.7
Q ss_pred CCCCCCcccEEEeecC-cccc----ccCcccCCCCCCCEEEccCCcCCCCC----chhhhccCcCCeeecCCccccCc--
Q 048430 366 GFGNLSNLLVLSLVNN-ELAG----AIPTVLGKLQKLQGLDLNSNKLKGFI----PTDLCKLEKLNTLLSNNNALQGQ-- 434 (973)
Q Consensus 366 ~~~~l~~L~~L~Ls~n-~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~----~~~~~~l~~L~~L~l~~N~l~~~-- 434 (973)
.+...+.|++|+|++| .+.. .+...+...++|++|+|++|+|...- ...+...++|++|+|++|.|...
T Consensus 31 ~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~ 110 (185)
T 1io0_A 31 IQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGI 110 (185)
T ss_dssp HHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHH
T ss_pred HHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHH
Confidence 3567889999999999 8874 34566777899999999999998432 33444557788888888877754
Q ss_pred --CcccccCcCCCCeeec--cCCCCC
Q 048430 435 --IPTCLANLTSLRHLDF--RSNSLN 456 (973)
Q Consensus 435 --~~~~~~~l~~L~~L~L--~~N~l~ 456 (973)
+...+...++|++|+| ++|.|.
T Consensus 111 ~~l~~~L~~n~~L~~L~L~~~~N~i~ 136 (185)
T 1io0_A 111 LALVEALQSNTSLIELRIDNQSQPLG 136 (185)
T ss_dssp HHHHHGGGGCSSCCEEECCCCSSCCC
T ss_pred HHHHHHHHhCCCceEEEecCCCCCCC
Confidence 2444555566777777 667665
No 419
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.17 E-value=7.9e-06 Score=88.03 Aligned_cols=136 Identities=16% Similarity=0.161 Sum_probs=97.7
Q ss_pred CccccccCceEEEEEEeCCCeEEEEEEEeccchhhHHHHHHHHHHHHhccCC---ceeEEEeeee-cCCeeEEEEEecCC
Q 048430 685 SNLLGSGSFDNVYKATLANGVSVAVKVFNLQEDRALKSFDTECEVMRRIRHR---NLIKIVSSCS-NPGFKALIMQYMPQ 760 (973)
Q Consensus 685 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~l~~~~~-~~~~~~lv~e~~~~ 760 (973)
.+.++.|....||+. +..+++|+.. .......+.+|+++++.+.+. .+.+.+.++. ..+..++||||++|
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~--~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G 97 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPK--SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQG 97 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEES--SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCS
T ss_pred eeecCCCcceeEEEE----CCEEEEEecC--CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCC
Confidence 456888888899988 5678888853 223456789999999999642 3556666663 45667899999999
Q ss_pred CCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhc--------------------------------------------
Q 048430 761 GSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHG-------------------------------------------- 796 (973)
Q Consensus 761 gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~-------------------------------------------- 796 (973)
.++.+.... .++..++..++.++++.|+.||.-
T Consensus 98 ~~l~~~~~~---~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 174 (306)
T 3tdw_A 98 QILGEDGMA---VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLTL 174 (306)
T ss_dssp EECHHHHHT---TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHHH
T ss_pred eECchhhhh---hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHHH
Confidence 888763221 245566666677777776666631
Q ss_pred -------------CCCCeEEccCCCCcEEeCC---CCc-EEEeecccccc
Q 048430 797 -------------YSTPIIHCDLKPNNVLLDD---DMV-AHLGDFGIAKL 829 (973)
Q Consensus 797 -------------~~~~ivH~dlk~~Nill~~---~~~-~kl~Dfgla~~ 829 (973)
....++|+|+.+.||+++. ++. +.|+||+.+..
T Consensus 175 ~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 175 RFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 1234699999999999987 455 58999998764
No 420
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.14 E-value=1.4e-05 Score=84.61 Aligned_cols=135 Identities=16% Similarity=0.110 Sum_probs=99.1
Q ss_pred cccccCce-EEEEEEeC-CCeEEEEEEEeccchhhHHHHHHHHHHHHhcc-CCceeEEEeeeecCCeeEEEEEecCCCCH
Q 048430 687 LLGSGSFD-NVYKATLA-NGVSVAVKVFNLQEDRALKSFDTECEVMRRIR-HRNLIKIVSSCSNPGFKALIMQYMPQGSL 763 (973)
Q Consensus 687 ~lg~G~~g-~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~~gsL 763 (973)
.+..|..+ .||+.... ++..+++|+-... ....+.+|+..++.+. +--+.++++++.+.+..++|||++++.++
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~ 107 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTA 107 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEH
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccc
Confidence 45556555 68987754 4677899986532 3456888999998884 33467888888888999999999999888
Q ss_pred HHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhc-----------------------------------------------
Q 048430 764 EKWLYSHNYSLTIRQRLDIMIDVASALEYLHHG----------------------------------------------- 796 (973)
Q Consensus 764 ~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~----------------------------------------------- 796 (973)
.+..... ......++.+++..+..||.-
T Consensus 108 ~~~~~~~-----~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (272)
T 4gkh_A 108 FQVLEEY-----PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKE 182 (272)
T ss_dssp HHHHHHC-----GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHHH
T ss_pred cccccCC-----HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHHH
Confidence 7765432 123445677777777777730
Q ss_pred --------CCCCeEEccCCCCcEEeCCCCcEEEeecccccc
Q 048430 797 --------YSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKL 829 (973)
Q Consensus 797 --------~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~ 829 (973)
....++|+|+.+.||+++.++.+-|+||+.+..
T Consensus 183 l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 183 MHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp HHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 012278999999999999887778999998763
No 421
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.11 E-value=1.2e-05 Score=85.41 Aligned_cols=76 Identities=14% Similarity=0.145 Sum_probs=60.7
Q ss_pred CCccccccCceEEEEEEeCCCeEEEEEEEeccchhhHHHHHHHHHHHHhccCC---ceeEEEeeeecCCeeEEEEEecCC
Q 048430 684 ESNLLGSGSFDNVYKATLANGVSVAVKVFNLQEDRALKSFDTECEVMRRIRHR---NLIKIVSSCSNPGFKALIMQYMPQ 760 (973)
Q Consensus 684 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~l~~~~~~~~~~~lv~e~~~~ 760 (973)
..+.++.|.++.||++...+|+.++||+...........|.+|++.++.+++. .+.+++++. ..++||||+++
T Consensus 19 ~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~g 94 (288)
T 3d1u_A 19 AVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDE 94 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCC
T ss_pred ceeeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEeccc
Confidence 45789999999999999888999999986543322346789999999999765 577777764 36899999998
Q ss_pred CCH
Q 048430 761 GSL 763 (973)
Q Consensus 761 gsL 763 (973)
+++
T Consensus 95 ~~~ 97 (288)
T 3d1u_A 95 RPP 97 (288)
T ss_dssp CCC
T ss_pred CCC
Confidence 864
No 422
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=97.95 E-value=2.9e-05 Score=85.53 Aligned_cols=142 Identities=14% Similarity=0.179 Sum_probs=89.8
Q ss_pred CCCccccccCceEEEEEEeCCCeEEEEEEEeccchhhHHHHHHHHHHHHhccCCc--eeEEEeeeecC-CeeEEEEEecC
Q 048430 683 GESNLLGSGSFDNVYKATLANGVSVAVKVFNLQEDRALKSFDTECEVMRRIRHRN--LIKIVSSCSNP-GFKALIMQYMP 759 (973)
Q Consensus 683 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~l~~~~~~~-~~~~lv~e~~~ 759 (973)
...+.++.|....+|+... +++.+++|+.... ..+.+|+.+++.+.... +.++++++... +..++||||++
T Consensus 44 ~~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~ 117 (362)
T 3ovc_A 44 SDLMQLSEGEESRAFSFDV-GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQ 117 (362)
T ss_dssp EEEEEEEECSSEEEEEEEE-TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCC
T ss_pred ceEEECCCCCcceEEEEEE-CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecC
Confidence 3456788999999999886 4788999987432 25888999999886433 55677766554 67899999998
Q ss_pred CCCHHHH------------------hhhCC-C---C------------CCHHHH---------------------HHHHH
Q 048430 760 QGSLEKW------------------LYSHN-Y---S------------LTIRQR---------------------LDIMI 784 (973)
Q Consensus 760 ~gsL~~~------------------l~~~~-~---~------------l~~~~~---------------------~~i~~ 784 (973)
|.++.+. ++... . . -+|... .....
T Consensus 118 G~~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 197 (362)
T 3ovc_A 118 GVTLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVSASVAQ 197 (362)
T ss_dssp SEETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTHHHHHH
T ss_pred CCCcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhcccccchH
Confidence 7654311 11110 0 0 001100 01111
Q ss_pred HHHHHHHHhhhc-CCCCeEEccCCCCcEEeCCCCcEEEeeccccccc
Q 048430 785 DVASALEYLHHG-YSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLL 830 (973)
Q Consensus 785 ~i~~~L~~LH~~-~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~ 830 (973)
.+...++++... ....++|+|+.+.||+++.++.+.|+||+.+..-
T Consensus 198 ~~~~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~g 244 (362)
T 3ovc_A 198 ALDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMFG 244 (362)
T ss_dssp HHHHHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEEE
T ss_pred HHHHHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCcccccC
Confidence 122222233210 0145799999999999988878889999998754
No 423
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=97.91 E-value=1.2e-05 Score=88.81 Aligned_cols=79 Identities=14% Similarity=0.076 Sum_probs=55.7
Q ss_pred ccc-cccCceEEEEEEeC-------CCeEEEEEEEeccc---hhhHHHHHHHHHHHHhcc-C--CceeEEEeeeecC---
Q 048430 686 NLL-GSGSFDNVYKATLA-------NGVSVAVKVFNLQE---DRALKSFDTECEVMRRIR-H--RNLIKIVSSCSNP--- 748 (973)
Q Consensus 686 ~~l-g~G~~g~Vy~~~~~-------~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~-h--~niv~l~~~~~~~--- 748 (973)
+.| +.|....+|+.... +++.+++|+..... ......+.+|+.+++.+. + -.+.++++++.+.
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~ 105 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL 105 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence 567 88889999988754 26788999765332 001245778999988884 3 3567788877654
Q ss_pred CeeEEEEEecCCCCHH
Q 048430 749 GFKALIMQYMPQGSLE 764 (973)
Q Consensus 749 ~~~~lv~e~~~~gsL~ 764 (973)
+..++||||++|..+.
T Consensus 106 g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 106 GTPFFLMDYVEGVVPP 121 (357)
T ss_dssp SSCEEEEECCCCBCCC
T ss_pred CCceEEEEecCCCChh
Confidence 4578999999987654
No 424
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.66 E-value=2.6e-05 Score=75.02 Aligned_cols=92 Identities=11% Similarity=0.082 Sum_probs=67.5
Q ss_pred CCCCCCCCCcccEEEeecCccccccCcccCCCCCCCEEEccCCc-CCCCCchhhhcc----CcCCeeecCCcc-ccCcCc
Q 048430 363 IPVGFGNLSNLLVLSLVNNELAGAIPTVLGKLQKLQGLDLNSNK-LKGFIPTDLCKL----EKLNTLLSNNNA-LQGQIP 436 (973)
Q Consensus 363 ~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~~~~~~~l----~~L~~L~l~~N~-l~~~~~ 436 (973)
+|.....-..|+.||++++.++..--..+..+++|++|+|++|. |+..--..++.+ ++|+.|++++|. ++...-
T Consensus 53 LP~~~~~~~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl 132 (176)
T 3e4g_A 53 LPTGPLDKYKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGI 132 (176)
T ss_dssp SCCCSTTCCCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHH
T ss_pred CCcccCCCceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHH
Confidence 34444344579999999999887666677889999999999985 664444455554 368888888874 776555
Q ss_pred ccccCcCCCCeeeccCCC
Q 048430 437 TCLANLTSLRHLDFRSNS 454 (973)
Q Consensus 437 ~~~~~l~~L~~L~L~~N~ 454 (973)
..+..+++|++|+++++.
T Consensus 133 ~~L~~~~~L~~L~L~~c~ 150 (176)
T 3e4g_A 133 IALHHFRNLKYLFLSDLP 150 (176)
T ss_dssp HHGGGCTTCCEEEEESCT
T ss_pred HHHhcCCCCCEEECCCCC
Confidence 667778888888888875
No 425
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.56 E-value=0.00032 Score=76.72 Aligned_cols=138 Identities=15% Similarity=0.149 Sum_probs=79.8
Q ss_pred ccccccCceEEEEEEeCCCeEEEEEEEeccchhhHHHHHHHHHHHHhccC--CceeEEEe------eeecCCeeEEEEEe
Q 048430 686 NLLGSGSFDNVYKATLANGVSVAVKVFNLQEDRALKSFDTECEVMRRIRH--RNLIKIVS------SCSNPGFKALIMQY 757 (973)
Q Consensus 686 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~l~~------~~~~~~~~~lv~e~ 757 (973)
+.++.|..+.||+....+| .+++|+..... ..+..|+.+++.+.. -.+.+++. +....+..++||||
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~~----~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~ 112 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRPE----KKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDW 112 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECSCH----HHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEEC
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCCCH----HHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEe
Confidence 4566677899999987655 58899886421 233455565555531 12333333 11245678899999
Q ss_pred cCCCCHH--------------HHhhh--CCC-----------CCCHHHH-------------------------------
Q 048430 758 MPQGSLE--------------KWLYS--HNY-----------SLTIRQR------------------------------- 779 (973)
Q Consensus 758 ~~~gsL~--------------~~l~~--~~~-----------~l~~~~~------------------------------- 779 (973)
++|..+. ..++. ... ...|...
T Consensus 113 i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 192 (346)
T 2q83_A 113 IEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEI 192 (346)
T ss_dssp CCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHH
T ss_pred ecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHH
Confidence 9986432 11111 100 0122110
Q ss_pred HHHHHHHHHHHHHhhh----------cCCCCeEEccCCCCcEEeCCCCcEEEeeccccc
Q 048430 780 LDIMIDVASALEYLHH----------GYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAK 828 (973)
Q Consensus 780 ~~i~~~i~~~L~~LH~----------~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~ 828 (973)
..+...+.+++.+|+. .....++|+|+.+.||+++.++.+.++||+.+.
T Consensus 193 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 193 DGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 0111224445666652 125789999999999999888899999999875
No 426
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.54 E-value=0.00026 Score=79.31 Aligned_cols=75 Identities=11% Similarity=0.124 Sum_probs=49.5
Q ss_pred CccccccCceEEEEEEeC-CCeEEEEEEEeccch-------hhHHHHHHHHHHHHhccC--C-ceeEEEeeeecCCeeEE
Q 048430 685 SNLLGSGSFDNVYKATLA-NGVSVAVKVFNLQED-------RALKSFDTECEVMRRIRH--R-NLIKIVSSCSNPGFKAL 753 (973)
Q Consensus 685 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-------~~~~~~~~e~~~l~~l~h--~-niv~l~~~~~~~~~~~l 753 (973)
.+.+|.|..+.||++... +++.|+||....... .....+..|+++++.+.. + .+.+++.+. .+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~d--~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD--TEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEE--TTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEEc--CCccEE
Confidence 467999999999999754 468899997643211 123456789999888742 3 344555543 345689
Q ss_pred EEEecCCC
Q 048430 754 IMQYMPQG 761 (973)
Q Consensus 754 v~e~~~~g 761 (973)
|||++++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999763
No 427
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.50 E-value=1.6e-05 Score=76.51 Aligned_cols=84 Identities=13% Similarity=0.033 Sum_probs=51.3
Q ss_pred ccccEEEecCCcccCCcCcCccCCCCCCeEEccCCc-CcccCCcccccC----CcCCEEEcccCc-cccCCCCCcccccc
Q 048430 467 KYILAVDFSLNSLSGSLPLNIGNLEALGGLNLTGNQ-LSGYIPSSIGNL----KNLDWLALARNA-FQGPIPQSFGSLIS 540 (973)
Q Consensus 467 ~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l----~~L~~L~Ls~N~-l~~~~p~~~~~l~~ 540 (973)
.+|+.||++++.++..--..+.++++|+.|+|++|. +++.--..++.+ ++|++|+|++|. ++..--..+..+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 356666776666665544556677777777777774 554333344443 357777777764 65433344566677
Q ss_pred cccccccccc
Q 048430 541 LQSLDLSGNN 550 (973)
Q Consensus 541 L~~L~Ls~N~ 550 (973)
|++|+|+++.
T Consensus 141 L~~L~L~~c~ 150 (176)
T 3e4g_A 141 LKYLFLSDLP 150 (176)
T ss_dssp CCEEEEESCT
T ss_pred CCEEECCCCC
Confidence 7777777663
No 428
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.41 E-value=0.00017 Score=81.33 Aligned_cols=80 Identities=13% Similarity=0.071 Sum_probs=50.9
Q ss_pred CCCeEEccCCCCcEEeCCCCcEEEeecccccccCCCCCcccccccccccccCccCCCCC---CCCcchhHHHHHHHHHHH
Q 048430 798 STPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGVDPVTQTMTLATIGYMAPEYGSEG---IVSISGDVYSFGILMMET 874 (973)
Q Consensus 798 ~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~sDvws~Gvvl~el 874 (973)
...++|+|+++.|||++.++ ++++||+.+..-.+..........-...|++|+..... ......++.+....+|+.
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWNL 309 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHHH
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHHH
Confidence 67799999999999999876 99999999875431111000000012346666654321 223345667888888888
Q ss_pred HhCC
Q 048430 875 FTRR 878 (973)
Q Consensus 875 ltg~ 878 (973)
++++
T Consensus 310 y~~~ 313 (420)
T 2pyw_A 310 FNKR 313 (420)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8764
No 429
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.29 E-value=0.0011 Score=70.97 Aligned_cols=137 Identities=15% Similarity=0.134 Sum_probs=91.5
Q ss_pred CCccccccCceEEEEEEeCCCeEEEEEEEeccchhhHHHHHHHHHHHHhcc---CCceeEEEeeeecCCeeEEEEEecCC
Q 048430 684 ESNLLGSGSFDNVYKATLANGVSVAVKVFNLQEDRALKSFDTECEVMRRIR---HRNLIKIVSSCSNPGFKALIMQYMPQ 760 (973)
Q Consensus 684 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~l~~~~~~~~~~~lv~e~~~~ 760 (973)
..+.|+.|....+|+.... +..+++|+.... ....+.+|++.++.+. ...+.++++++...+..++||||+++
T Consensus 40 ~~~~l~gG~~n~~y~v~~~-~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G 115 (312)
T 3jr1_A 40 HKEKLYSGEMNEIWLINDE-VQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNK 115 (312)
T ss_dssp EEEEECCSSSSEEEEEESS-SCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCC
T ss_pred eeEEeCCccceeeeEEEEC-CCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccC
Confidence 3467899999999999864 678889987533 2467889999998884 35688888888878889999999998
Q ss_pred CCHH--------H---HhhhCCC---------------------CCCHHHHH---HHH----------------HHHH-H
Q 048430 761 GSLE--------K---WLYSHNY---------------------SLTIRQRL---DIM----------------IDVA-S 788 (973)
Q Consensus 761 gsL~--------~---~l~~~~~---------------------~l~~~~~~---~i~----------------~~i~-~ 788 (973)
..+. + .++.... .-+|.... ++. ..++ +
T Consensus 116 ~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~ 195 (312)
T 3jr1_A 116 SKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQI 195 (312)
T ss_dssp CCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHH
T ss_pred CCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHH
Confidence 7541 1 1222110 01343321 111 1111 1
Q ss_pred HHHHhh-hcCCCCeEEccCCCCcEEeCCCCcEEEeecc
Q 048430 789 ALEYLH-HGYSTPIIHCDLKPNNVLLDDDMVAHLGDFG 825 (973)
Q Consensus 789 ~L~~LH-~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 825 (973)
....|. ......+||+|+.+.|++++.++ +.+.|+.
T Consensus 196 l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 196 VADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 122342 12246799999999999999887 8898974
No 430
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.25 E-value=0.0013 Score=69.98 Aligned_cols=78 Identities=14% Similarity=0.150 Sum_probs=56.8
Q ss_pred CCCCCccccccCceEEEEEEeCCCeEEEEEEEeccchhhHHHHHHHHHHHHhccC---CceeEEEeeeecCCeeEEEEEe
Q 048430 681 GFGESNLLGSGSFDNVYKATLANGVSVAVKVFNLQEDRALKSFDTECEVMRRIRH---RNLIKIVSSCSNPGFKALIMQY 757 (973)
Q Consensus 681 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h---~niv~l~~~~~~~~~~~lv~e~ 757 (973)
.....+.+|.|..+.||+.+..+|+.|++|+...........|.+|++.|+.+.- --+.+++++. ..++||||
T Consensus 16 ~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e~ 91 (288)
T 3f7w_A 16 EVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEW 91 (288)
T ss_dssp CEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEEC
T ss_pred CeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEEe
Confidence 3445678999999999999999999999998654433333568899999998842 1344555542 24789999
Q ss_pred cCCCC
Q 048430 758 MPQGS 762 (973)
Q Consensus 758 ~~~gs 762 (973)
++++.
T Consensus 92 l~~~~ 96 (288)
T 3f7w_A 92 VDERP 96 (288)
T ss_dssp CCCCC
T ss_pred ecccC
Confidence 98764
No 431
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.14 E-value=0.00013 Score=71.61 Aligned_cols=92 Identities=9% Similarity=0.085 Sum_probs=52.0
Q ss_pred cccceeeecccccccc----CcchhcccCcccEEEeccccccccC----CCcccccccceEEEccCCcCCCCCCCcchhh
Q 048430 243 PNLENLFLWKNNLSGI----IPDSICNASEATILELSSNLFSGLV----PNTFGNCRQLQILSLGDNQLTTGSSAQGQIF 314 (973)
Q Consensus 243 ~~L~~L~L~~N~l~~~----~~~~l~~l~~L~~L~L~~N~i~~~~----~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~ 314 (973)
..|+.|+|++|+|... +.+.+..-+.|++|+|++|.|+... ..++..-+.|++|+|++|....+.......+
T Consensus 70 ~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~i 149 (197)
T 1pgv_A 70 KHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDM 149 (197)
T ss_dssp SCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHH
T ss_pred CCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCCcCcCcCHHHHHHH
Confidence 4555666666665532 2233444566777777777766321 2234455668888887653312222222345
Q ss_pred hhhhccCCcCcEEEccCCCC
Q 048430 315 YSSLAKCRYLRVLVLDTNPL 334 (973)
Q Consensus 315 ~~~l~~l~~L~~L~L~~N~l 334 (973)
...+..-+.|+.|+++.|.+
T Consensus 150 a~aL~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 150 MMAIEENESLLRVGISFASM 169 (197)
T ss_dssp HHHHHHCSSCCEEECCCCCH
T ss_pred HHHHHhCCCcCeEeccCCCc
Confidence 55677778888888876654
No 432
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.07 E-value=0.00013 Score=71.49 Aligned_cols=17 Identities=6% Similarity=0.091 Sum_probs=8.4
Q ss_pred cccCcccEEEeccc-ccc
Q 048430 264 CNASEATILELSSN-LFS 280 (973)
Q Consensus 264 ~~l~~L~~L~L~~N-~i~ 280 (973)
.+-+.|+.|+|++| +|.
T Consensus 38 ~~n~~L~~L~L~~nn~ig 55 (197)
T 1pgv_A 38 EDDTDLKEVNINNMKRVS 55 (197)
T ss_dssp TTCSSCCEEECTTCCSSC
T ss_pred hcCCCccEEECCCCCCCC
Confidence 33445555555553 443
No 433
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=96.81 E-value=0.0033 Score=67.82 Aligned_cols=158 Identities=15% Similarity=0.196 Sum_probs=90.0
Q ss_pred CCCCHHHHHHHhcCCCC-----CccccccCceEEEEEEeCCCeEEEEEEEeccchhhHHHHHHHHHHHHhccCCc--eeE
Q 048430 668 SRISYHELQQATNGFGE-----SNLLGSGSFDNVYKATLANGVSVAVKVFNLQEDRALKSFDTECEVMRRIRHRN--LIK 740 (973)
Q Consensus 668 ~~~~~~~~~~~~~~~~~-----~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~ 740 (973)
..++.+++......|.. .+.|+.|....+|+....+| .+++|+..... ..+.+..|+.+++.+.... +.+
T Consensus 5 ~~~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~--~~~~l~~e~~~l~~L~~~g~~vP~ 81 (322)
T 2ppq_A 5 TDITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPL 81 (322)
T ss_dssp CCCCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCC
T ss_pred ccCCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCC--CHHHHHHHHHHHHHHHHCCCCCCc
Confidence 34566777777776764 24566788899999987755 67889876421 1234566777777764222 233
Q ss_pred EEee------eecCCeeEEEEEecCCCCHHH--------------HhhhC--C--CC----C---CHHHHHH--------
Q 048430 741 IVSS------CSNPGFKALIMQYMPQGSLEK--------------WLYSH--N--YS----L---TIRQRLD-------- 781 (973)
Q Consensus 741 l~~~------~~~~~~~~lv~e~~~~gsL~~--------------~l~~~--~--~~----l---~~~~~~~-------- 781 (973)
++.. ....+..++|++|++|..+.. .++.. . .. . .|.....
T Consensus 82 ~~~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~ 161 (322)
T 2ppq_A 82 PLPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADE 161 (322)
T ss_dssp BCCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGG
T ss_pred ccCCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHh
Confidence 3321 112356789999998754310 01110 0 00 1 1221100
Q ss_pred ----HHHHHHHHHHHhhh----cCCCCeEEccCCCCcEEeCCCCcEEEeeccccc
Q 048430 782 ----IMIDVASALEYLHH----GYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAK 828 (973)
Q Consensus 782 ----i~~~i~~~L~~LH~----~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~ 828 (973)
+...+.+.++++++ .....++|+|+.+.||+++.+..+.++||+.+.
T Consensus 162 ~~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 162 VEKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp TSTTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred hhhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 01123444555542 123568999999999999987666899999875
No 434
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=96.73 E-value=0.0033 Score=67.16 Aligned_cols=129 Identities=14% Similarity=0.170 Sum_probs=75.3
Q ss_pred CccccccCceEEEEEEeCCCeEEEEEEEeccchhhHHHHHHHHHHHHhccCCce-eEEEeeeecCCeeEEEEEec-CCCC
Q 048430 685 SNLLGSGSFDNVYKATLANGVSVAVKVFNLQEDRALKSFDTECEVMRRIRHRNL-IKIVSSCSNPGFKALIMQYM-PQGS 762 (973)
Q Consensus 685 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~e~~-~~gs 762 (973)
.+.|+.|....+|+. ..+++|+....... .....+|+.+++.+....+ .++++++ ++.-++|+||+ ++.+
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~-~~~r~~E~~~l~~l~~~g~~P~~~~~~--~~~~~~v~e~i~~g~~ 94 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEE-YINRANEAVAAREAAKAGVSPEVLHVD--PATGVMVTRYIAGAQT 94 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEEC--TTTCCEEEECCTTCEE
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccc-eeCHHHHHHHHHHHHHcCCCCceEEEE--CCCCEEEEeecCCCcc
Confidence 678989999999998 46888887543211 1223568888877742222 4555544 33346899999 5544
Q ss_pred HHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhh-----------------------------------------------
Q 048430 763 LEKWLYSHNYSLTIRQRLDIMIDVASALEYLHH----------------------------------------------- 795 (973)
Q Consensus 763 L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~----------------------------------------------- 795 (973)
+...-... +..++.++++.|+-||.
T Consensus 95 l~~~~~~~--------~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l 166 (301)
T 3dxq_A 95 MSPEKFKT--------RPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSAL 166 (301)
T ss_dssp CCHHHHHH--------STTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHHHHHHHH
T ss_pred CCHhhHhh--------hHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHH
Confidence 32100000 00012222222222221
Q ss_pred ---cCCCCeEEccCCCCcEEeCCCCcEEEeeccccccc
Q 048430 796 ---GYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLL 830 (973)
Q Consensus 796 ---~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~ 830 (973)
.....++|+|+.+.||+ ..++.+.++||..+..-
T Consensus 167 ~~~~~~~~l~HgDl~~~Nil-~~~~~~~lID~e~a~~g 203 (301)
T 3dxq_A 167 AAHPLPLAACHCDPLCENFL-DTGERMWIVDWEYSGMN 203 (301)
T ss_dssp HSSCCCCEEECSCCCGGGEE-ECSSCEEECCCTTCEEE
T ss_pred HhcCCCceeeccCCCcCCEE-ECCCCEEEEecccccCC
Confidence 11344799999999999 55667899999988643
No 435
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.55 E-value=0.0032 Score=57.56 Aligned_cols=55 Identities=25% Similarity=0.382 Sum_probs=28.8
Q ss_pred EEEeeCcccC-CCCCccccCCCCCCeEEccCccccccCCccccCCCCCccEEEcccccc
Q 048430 122 SFDVSSNKIT-GEFPSAIVNISSLKSIRLDNNSLSGSFPTDLCTRLPSLVQLRLLGNNI 179 (973)
Q Consensus 122 ~L~Ls~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~L~~N~l 179 (973)
.++.+++.++ ..+|..+. ++|++|+|++|+|+ .+|.++|..+++|+.|+|++|.+
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~-~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLT-ALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCS-SCCTTTGGGCTTCCEEECCSSCC
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCC-ccChhhhhhccccCEEEecCCCe
Confidence 3444444443 23343321 24556666666665 56655555566666666666554
No 436
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.52 E-value=0.0044 Score=68.10 Aligned_cols=140 Identities=13% Similarity=0.168 Sum_probs=82.5
Q ss_pred CccccccCceEEEEEEeC--------CCeEEEEEEEeccchhhHHHHHHHHHHHHhcc-CCceeEEEeeeecCCeeEEEE
Q 048430 685 SNLLGSGSFDNVYKATLA--------NGVSVAVKVFNLQEDRALKSFDTECEVMRRIR-HRNLIKIVSSCSNPGFKALIM 755 (973)
Q Consensus 685 ~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ 755 (973)
.+.+..|-...+|+.... +++.+++|+.... ......+.+|.++++.+. +.-..++++++.+ .+||
T Consensus 55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~ 129 (379)
T 3feg_A 55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLE 129 (379)
T ss_dssp CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEE
T ss_pred EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEE
Confidence 356777888899998864 3578999986322 122456678999998885 3333566766653 2899
Q ss_pred EecCCCCHHH--------------H---hhhCC----CCCC--HHHHHHHHHHHHH-------------------HHHHh
Q 048430 756 QYMPQGSLEK--------------W---LYSHN----YSLT--IRQRLDIMIDVAS-------------------ALEYL 793 (973)
Q Consensus 756 e~~~~gsL~~--------------~---l~~~~----~~l~--~~~~~~i~~~i~~-------------------~L~~L 793 (973)
||++|..+.. . ++... .... +.++.++..++.. .+..|
T Consensus 130 e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L 209 (379)
T 3feg_A 130 QYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNL 209 (379)
T ss_dssp ECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHH
T ss_pred EEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHH
Confidence 9998754421 0 11111 1122 3444444443322 23333
Q ss_pred h----h-cCCCCeEEccCCCCcEEeCCC----CcEEEeecccccc
Q 048430 794 H----H-GYSTPIIHCDLKPNNVLLDDD----MVAHLGDFGIAKL 829 (973)
Q Consensus 794 H----~-~~~~~ivH~dlk~~Nill~~~----~~~kl~Dfgla~~ 829 (973)
. . .....++|+|+.+.||+++.+ +.+.++||..+..
T Consensus 210 ~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 210 RKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 2 1 123458899999999999876 7899999998763
No 437
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=96.48 E-value=0.015 Score=62.72 Aligned_cols=158 Identities=12% Similarity=0.154 Sum_probs=89.9
Q ss_pred CCCCHHHHHHHhcCCCC-----CccccccCceEEEEEEeCCCeEEEEEEEeccchhhHHHHHHHHHHHHhccCC--ceeE
Q 048430 668 SRISYHELQQATNGFGE-----SNLLGSGSFDNVYKATLANGVSVAVKVFNLQEDRALKSFDTECEVMRRIRHR--NLIK 740 (973)
Q Consensus 668 ~~~~~~~~~~~~~~~~~-----~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~--niv~ 740 (973)
...+.+++..+...|.. ...++ |....||+....+|+.+++|...... .....+..|..+++.+... .+.+
T Consensus 9 ~~l~~~~i~~~l~~~g~~~~~~~~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~vp~ 86 (328)
T 1zyl_A 9 QTLHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAA 86 (328)
T ss_dssp CCCCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCC
T ss_pred CCCCHHHHHHHHHHcCCCCCceEEeec-CcccceEEEEcCCCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCeecc
Confidence 34455556555554432 34566 88889999887778789999986331 1234667788888777422 2334
Q ss_pred EEee-----eecCCeeEEEEEecCCCCHH-----H------H---hhh----C----CCCCCHHHH----HHH-------
Q 048430 741 IVSS-----CSNPGFKALIMQYMPQGSLE-----K------W---LYS----H----NYSLTIRQR----LDI------- 782 (973)
Q Consensus 741 l~~~-----~~~~~~~~lv~e~~~~gsL~-----~------~---l~~----~----~~~l~~~~~----~~i------- 782 (973)
++.. ....+..++||||++|..+. . . ++. . ...+++... ..+
T Consensus 87 ~~~~~g~~~~~~~g~~~~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 166 (328)
T 1zyl_A 87 PVAFNGQTLLNHQGFYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLI 166 (328)
T ss_dssp CCCBTTBSCEEETTEEEEEEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSS
T ss_pred eeecCCcEEEEECCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcC
Confidence 4432 12245667899999875321 1 0 111 0 011222211 001
Q ss_pred --------HHHHHHHHHHhhh----cCCCCeEEccCCCCcEEeCCCCcEEEeecccccc
Q 048430 783 --------MIDVASALEYLHH----GYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKL 829 (973)
Q Consensus 783 --------~~~i~~~L~~LH~----~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~ 829 (973)
...+...++.+.. .....++|+|+++.||+++ + .+.++||+.+..
T Consensus 167 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 167 PSGLKAAFLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp CTTTHHHHHHHHHHHHHHHHHHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 1111122233321 1245688999999999999 5 899999998764
No 438
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.47 E-value=0.0042 Score=56.77 Aligned_cols=55 Identities=15% Similarity=0.277 Sum_probs=25.4
Q ss_pred EEEecCCCCC-CCCCcccccccCCcEEEccCCCCCCCCCccccCCCCCccEEEeeCccc
Q 048430 73 SLNISGNSFY-DTLPNELWHMRRLKIIDFSSNSLSGSLPGDMCNSFTQLESFDVSSNKI 130 (973)
Q Consensus 73 ~L~L~~n~~~-~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~~l~~L~~L~Ls~N~l 130 (973)
.++.++++++ ..+|..+. .+|++|+|++|+|+ .+|.++|..+++|++|+|++|.+
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~-~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLT-ALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCS-SCCTTTGGGCTTCCEEECCSSCC
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCC-ccChhhhhhccccCEEEecCCCe
Confidence 4555555552 14443322 23445555555554 44444444444444444444443
No 439
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.44 E-value=0.0037 Score=70.32 Aligned_cols=72 Identities=15% Similarity=0.223 Sum_probs=49.1
Q ss_pred CccccccCceEEEEEEeCC--------CeEEEEEEEeccchhhHHHHHHHHHHHHhccCCc-eeEEEeeeecCCeeEEEE
Q 048430 685 SNLLGSGSFDNVYKATLAN--------GVSVAVKVFNLQEDRALKSFDTECEVMRRIRHRN-LIKIVSSCSNPGFKALIM 755 (973)
Q Consensus 685 ~~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~l~~~~~~~~~~~lv~ 755 (973)
.+.|+.|....||+....+ ++.+++|+...... .+.+.+|..+++.+...+ ..++++.+.+ .+|+
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~~--~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~ 151 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPET--ESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLE 151 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCCC--HHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEE
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCCc--HHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEE
Confidence 3568888889999998653 57899998843211 144557999988885333 3566766542 3899
Q ss_pred EecCCCC
Q 048430 756 QYMPQGS 762 (973)
Q Consensus 756 e~~~~gs 762 (973)
||++|.+
T Consensus 152 e~l~G~~ 158 (429)
T 1nw1_A 152 EYIPSRP 158 (429)
T ss_dssp CCCCEEE
T ss_pred EEeCCcc
Confidence 9998643
No 440
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.44 E-value=0.014 Score=63.14 Aligned_cols=140 Identities=12% Similarity=0.106 Sum_probs=74.1
Q ss_pred ccccccCceE-EEEEEeCCCeEEEEEEEeccchhhHHHHHHHHHHHHhccC--CceeEEEeeeecCCeeEEEEEecCCCC
Q 048430 686 NLLGSGSFDN-VYKATLANGVSVAVKVFNLQEDRALKSFDTECEVMRRIRH--RNLIKIVSSCSNPGFKALIMQYMPQGS 762 (973)
Q Consensus 686 ~~lg~G~~g~-Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~l~~~~~~~~~~~lv~e~~~~gs 762 (973)
+.++.|+... +|+....++..+++|....... ..+..|+.+++.+.. -.+.+++.+..+.+ ++|||++.+..
T Consensus 24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~---~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~~~ 98 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG---GDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGDAL 98 (333)
T ss_dssp CC--------CCEEEECTTCCEEEEEECCTTTT---CCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCSCB
T ss_pred eECCCCCCCceEEEEEcCCCCeEEEEECCCCCC---ccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCCcc
Confidence 4565555544 6677654467777776543211 234556777766642 23456666644443 68999997766
Q ss_pred HHHHhhhCC-------------------------CCCCHHHHHH--------H------------HHHHHHHHHHhh---
Q 048430 763 LEKWLYSHN-------------------------YSLTIRQRLD--------I------------MIDVASALEYLH--- 794 (973)
Q Consensus 763 L~~~l~~~~-------------------------~~l~~~~~~~--------i------------~~~i~~~L~~LH--- 794 (973)
+.+++.... ..++...... + ...+...++.+.
T Consensus 99 l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~ 178 (333)
T 3csv_A 99 FTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQ 178 (333)
T ss_dssp HHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhc
Confidence 654443210 0122111000 0 011112222221
Q ss_pred hcCCCCeEEccCCCCcEEeCCC----CcEEEeeccccccc
Q 048430 795 HGYSTPIIHCDLKPNNVLLDDD----MVAHLGDFGIAKLL 830 (973)
Q Consensus 795 ~~~~~~ivH~dlk~~Nill~~~----~~~kl~Dfgla~~~ 830 (973)
......++|||+.+.||+++.+ +.+.++||+.+..-
T Consensus 179 ~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G 218 (333)
T 3csv_A 179 LEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG 218 (333)
T ss_dssp CCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred ccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence 1124579999999999999875 68999999988754
No 441
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.11 E-value=0.012 Score=66.58 Aligned_cols=73 Identities=12% Similarity=0.188 Sum_probs=47.5
Q ss_pred CccccccCceEEEEEEeCC-CeEEEEEEEeccchhhHHHHHHHHHHHHhccCCce-eEEEeeeecCCeeEEEEEecCCCC
Q 048430 685 SNLLGSGSFDNVYKATLAN-GVSVAVKVFNLQEDRALKSFDTECEVMRRIRHRNL-IKIVSSCSNPGFKALIMQYMPQGS 762 (973)
Q Consensus 685 ~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~e~~~~gs 762 (973)
.+.|+.|-...+|+....+ +..+++|+....... .....+|..+++.+...++ .++++++. + .+||||++|.+
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~-~idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~~ 187 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDE-IINREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGYA 187 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCS-CSCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSEE
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhh-hcCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCcc
Confidence 4568888889999998765 578899987432211 1123588899988864444 56777663 2 25999998744
No 442
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=95.99 E-value=0.06 Score=52.91 Aligned_cols=119 Identities=17% Similarity=0.113 Sum_probs=76.9
Q ss_pred CHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCCCCcccccc
Q 048430 762 SLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGVDPVTQTMT 841 (973)
Q Consensus 762 sL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~ 841 (973)
+|.+++...+.++++++++.++.|.+++|.-+-.+ ... ..+=+.|..|++..+|.|...+ ..+.
T Consensus 34 SL~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~~-~~~-~~~i~~~~~i~l~~dG~V~f~~-~~s~------------- 97 (229)
T 2yle_A 34 SLEEILRLYNQPINEEQAWAVCYQCCGSLRAAARR-RQP-RHRVRSAAQIRVWRDGAVTLAP-AADD------------- 97 (229)
T ss_dssp EHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT-TCC-CCCCCSGGGEEEETTSCEEECC-C----------------
T ss_pred cHHHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhhc-ccC-CceecCCcceEEecCCceeccc-cccc-------------
Confidence 89999999888999999999999999998877211 011 1233457889999999988764 1111
Q ss_pred cccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHh
Q 048430 842 LATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAE 897 (973)
Q Consensus 842 ~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~ 897 (973)
.....+.|||... ...+.+.=|||+|+++|.-+--..|-+....-...+.+.+..
T Consensus 98 ~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~e~eE~eLS~~LE~LL~~ 152 (229)
T 2yle_A 98 AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLKENEERELSPPLEQLIDH 152 (229)
T ss_dssp ---------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCCTTEEECCCHHHHHHHHH
T ss_pred ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCCcccchhhCHHHHHHHHH
Confidence 0122456888653 456788999999999999988666644332223344444443
No 443
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=95.78 E-value=0.037 Score=60.02 Aligned_cols=33 Identities=21% Similarity=0.312 Sum_probs=28.5
Q ss_pred CCCeEEccCCCCcEEeCCCCcEEEeeccccccc
Q 048430 798 STPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLL 830 (973)
Q Consensus 798 ~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~ 830 (973)
...++|+|+.+.||+++.++.+.++||+.+...
T Consensus 205 ~~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~~ 237 (339)
T 3i1a_A 205 KYVLCHSDIHAGNVLVGNEESIYIIDWDEPMLA 237 (339)
T ss_dssp GCEEECSCCCGGGEEECGGGCEEECCCSSCEEE
T ss_pred CceeEeCCCCcCCEEEeCCCeEEEEECCCCeeC
Confidence 356899999999999998888999999887643
No 444
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=95.74 E-value=0.012 Score=64.93 Aligned_cols=72 Identities=14% Similarity=0.245 Sum_probs=43.8
Q ss_pred ccccccCceEEEEEEeCC---------CeEEEEEEEeccchhhHHHHHHHHHHHHhccCCc-eeEEEeeeecCCeeEEEE
Q 048430 686 NLLGSGSFDNVYKATLAN---------GVSVAVKVFNLQEDRALKSFDTECEVMRRIRHRN-LIKIVSSCSNPGFKALIM 755 (973)
Q Consensus 686 ~~lg~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~l~~~~~~~~~~~lv~ 755 (973)
+.++.|....+|+....+ ++.+++|+....... ......|.++++.+.... +.++++... -++||
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~-~~~~~~E~~~l~~L~~~g~~P~~~~~~~----~~~v~ 113 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDE-LYNTISEFEVYKTMSKYKIAPQLLNTFN----GGRIE 113 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGG-TSCHHHHHHHHHHHHHTTSSCCEEEEET----TEEEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccc-eecHHHHHHHHHHHHhcCCCCceEEecC----CcEEE
Confidence 467778888999998654 268889987543221 123467888888775333 345665442 26899
Q ss_pred EecCCCC
Q 048430 756 QYMPQGS 762 (973)
Q Consensus 756 e~~~~gs 762 (973)
||++|..
T Consensus 114 e~i~G~~ 120 (369)
T 3c5i_A 114 EWLYGDP 120 (369)
T ss_dssp ECCCSEE
T ss_pred EEecCCc
Confidence 9998753
No 445
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.08 E-value=0.048 Score=60.03 Aligned_cols=140 Identities=14% Similarity=0.164 Sum_probs=81.6
Q ss_pred ccccccCceEEEEEEeCC--------CeEEEEEEEeccchh------------------hHHHHHHHHHHHHhcc-CCce
Q 048430 686 NLLGSGSFDNVYKATLAN--------GVSVAVKVFNLQEDR------------------ALKSFDTECEVMRRIR-HRNL 738 (973)
Q Consensus 686 ~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~------------------~~~~~~~e~~~l~~l~-h~ni 738 (973)
+.+..|-...+|+....+ +..|.+++.-...+. ..+....|..+++.+. +.-.
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 456667888999988653 367888886432211 0112335888888885 4445
Q ss_pred eEEEeeeecCCeeEEEEEecCCCCHHH--------------H---hhhCC----CCCC--HHHHHHHHHHHH--------
Q 048430 739 IKIVSSCSNPGFKALIMQYMPQGSLEK--------------W---LYSHN----YSLT--IRQRLDIMIDVA-------- 787 (973)
Q Consensus 739 v~l~~~~~~~~~~~lv~e~~~~gsL~~--------------~---l~~~~----~~l~--~~~~~~i~~~i~-------- 787 (973)
.++++++... +|+||+++.+|.. . ++... .... +..+.++..++.
T Consensus 138 Pkl~~~~~~G----~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~ 213 (401)
T 3f2s_A 138 PKLYGIFPQG----RLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEES 213 (401)
T ss_dssp CCEEEEETTE----EEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHH
T ss_pred CeEEEEeCCC----eEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchh
Confidence 5677776432 8999998644311 0 11111 1122 223333333221
Q ss_pred --------------HHH----HHhhh-cCCCCeEEccCCCCcEEeCCC------CcEEEeecccccc
Q 048430 788 --------------SAL----EYLHH-GYSTPIIHCDLKPNNVLLDDD------MVAHLGDFGIAKL 829 (973)
Q Consensus 788 --------------~~L----~~LH~-~~~~~ivH~dlk~~Nill~~~------~~~kl~Dfgla~~ 829 (973)
.-+ ++|.. .....++|+|+.+.||+++.+ +.+.++||..|..
T Consensus 214 ~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~~ 280 (401)
T 3f2s_A 214 RIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCEE
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCCc
Confidence 112 22321 123458899999999999887 7899999998763
No 446
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=93.49 E-value=0.092 Score=58.40 Aligned_cols=73 Identities=11% Similarity=0.208 Sum_probs=47.7
Q ss_pred CccccccCceEEEEEEeCC--------CeEEEEEEEeccchhhHHHHHHHHHHHHhcc-CCceeEEEeeeecCCeeEEEE
Q 048430 685 SNLLGSGSFDNVYKATLAN--------GVSVAVKVFNLQEDRALKSFDTECEVMRRIR-HRNLIKIVSSCSNPGFKALIM 755 (973)
Q Consensus 685 ~~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ 755 (973)
.+.+..|-...+|+....+ ++.+++|+..... ....+..+|.++++.+. +.-..++++.+. -++|+
T Consensus 75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t-~~~idR~~E~~~l~~L~~~gi~P~l~~~~~----~~~I~ 149 (424)
T 3mes_A 75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV-GKFYDSKVELDVFRYLSNINIAPNIIADFP----EGRIE 149 (424)
T ss_dssp EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC--CCCCHHHHHHHHHHHHHTTSSCCEEEEET----TEEEE
T ss_pred EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc-chhcCHHHHHHHHHHHHhcCCCCCEEEEcC----CCEEE
Confidence 3567778888999998753 5789999864332 11223467888888875 332345555442 26899
Q ss_pred EecCCCC
Q 048430 756 QYMPQGS 762 (973)
Q Consensus 756 e~~~~gs 762 (973)
||++|..
T Consensus 150 efI~G~~ 156 (424)
T 3mes_A 150 EFIDGEP 156 (424)
T ss_dssp ECCCSEE
T ss_pred EEeCCcc
Confidence 9998864
No 447
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=87.43 E-value=1 Score=49.75 Aligned_cols=29 Identities=28% Similarity=0.380 Sum_probs=24.9
Q ss_pred eEEccCCCCcEEe------CCCCcEEEeecccccc
Q 048430 801 IIHCDLKPNNVLL------DDDMVAHLGDFGIAKL 829 (973)
Q Consensus 801 ivH~dlk~~Nill------~~~~~~kl~Dfgla~~ 829 (973)
++|+|+.+.||++ +++..++++||.+|..
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 5799999999999 4567899999998864
No 448
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=68.80 E-value=8.2 Score=37.79 Aligned_cols=121 Identities=13% Similarity=0.170 Sum_probs=80.2
Q ss_pred cCCceeEEEeeeecCCeeEEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEe
Q 048430 734 RHRNLIKIVSSCSNPGFKALIMQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLL 813 (973)
Q Consensus 734 ~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill 813 (973)
.||+.+.. .+-.+.+...+.|+.-+ +...|-.- ...+...+++++.+|+....+++ . =+|--+.|+|+++
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~--~~~~f~~i--k~~~~~eKlr~l~ni~~l~~~~~---~--r~tf~L~P~NL~f 112 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDIND--NHTPFDNI--KSFTKNEKLRYLLNIKNLEEVNR---T--RYTFVLAPDELFF 112 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCT--TSEEGGGG--GGSCHHHHHHHHHHGGGGGGGGG---S--SEECCCSGGGEEE
T ss_pred cCCcccce-EEEEcccEEEEEEEcCc--ccCCHHHH--HhcCHHHHHHHHHHHHHHHHHhc---C--ceEEEEecceEEE
Confidence 57877755 34455566555555433 22222221 14778999999999999887766 2 3678899999999
Q ss_pred CCCCcEEEeecccccccCCCCCcccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccC
Q 048430 814 DDDMVAHLGDFGIAKLLDGVDPVTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTG 887 (973)
Q Consensus 814 ~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~ 887 (973)
+.++.+++.=.|+...+. |. ..+...=.-.+=+++..+++++..|+....+
T Consensus 113 ~~~~~p~i~~RGik~~l~------------------P~-----~~~ee~fL~qyKAliiall~~K~~Fe~l~~G 163 (215)
T 4ann_A 113 TRDGLPIAKTRGLQNVVD------------------PL-----PVSEAEFLTRYKALVICAFNEKQSFDALVEG 163 (215)
T ss_dssp CTTSCEEESCCEETTTBS------------------CC-----CCCHHHHHHHHHHHHHHHHCTTCCHHHHHHS
T ss_pred cCCCCEEEEEccCccCCC------------------CC-----CCCHHHHHHHHHHHHHHHHcCCCCHHHHHcC
Confidence 999999998777644332 21 1233334446677888899999888664443
No 449
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=66.85 E-value=18 Score=35.54 Aligned_cols=115 Identities=9% Similarity=0.072 Sum_probs=76.8
Q ss_pred cCCceeEEEeeeecCCeeEEEEEecCCC-CHHHHhhhCCCCCCHHHHHHHHHHHHHHHH-HhhhcCCCCeEEccCCCCcE
Q 048430 734 RHRNLIKIVSSCSNPGFKALIMQYMPQG-SLEKWLYSHNYSLTIRQRLDIMIDVASALE-YLHHGYSTPIIHCDLKPNNV 811 (973)
Q Consensus 734 ~h~niv~l~~~~~~~~~~~lv~e~~~~g-sL~~~l~~~~~~l~~~~~~~i~~~i~~~L~-~LH~~~~~~ivH~dlk~~Ni 811 (973)
.||+. -...-.+.+...+.|+.-+++ ++.. ++ ..+..++++++.+|+.... +++ .-+|--+.|+|+
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~-i~----~~~~~eKlrll~nl~~L~~~~~~-----~r~tf~l~P~NL 115 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAA-IR----KTTLLSRIRAAIHLVSKVKHHSA-----RRLIFIVCPENL 115 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHH-HH----TSCHHHHHHHHHHHHHHHSSCCS-----SSEECCCCGGGE
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHH-HH----hcCHHHHHHHHHHHHHHHHHhhh-----CceeEEEeCceE
Confidence 57777 333345667777777765333 3443 32 4788999999999988777 665 356778999999
Q ss_pred EeCCCCcEEEeecccccccCCCCCcccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCc
Q 048430 812 LLDDDMVAHLGDFGIAKLLDGVDPVTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNE 883 (973)
Q Consensus 812 ll~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~ 883 (973)
+++.++.+++.=.|+-..+ +|.- .+..-=.-.+=+++..++.++..|+.
T Consensus 116 ~f~~~~~p~i~hRGi~~~l------------------pP~e-----~~ee~fl~qyKali~all~~K~~Fe~ 164 (219)
T 4ano_A 116 MFNRALEPFFLHVGVKESL------------------PPDE-----WDDERLLREVKATVLALTEGEYRFDE 164 (219)
T ss_dssp EECTTCCEEESCCEETTTB------------------SSCS-----CCHHHHHHHHHHHHHHHTTCSSCHHH
T ss_pred EEeCCCcEEEEEcCCcccC------------------CCCC-----CCHHHHHHHHHHHHHHHHcCCCCHHH
Confidence 9999999999877764432 2221 22222334566777888888776643
No 450
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=66.55 E-value=0.63 Score=52.40 Aligned_cols=59 Identities=10% Similarity=0.073 Sum_probs=16.7
Q ss_pred CCccccccCceEEEEEEeCC-CeEEEE------EEEeccc--hhhHHHHHHHHHHHHhccCCceeEEEeee
Q 048430 684 ESNLLGSGSFDNVYKATLAN-GVSVAV------KVFNLQE--DRALKSFDTECEVMRRIRHRNLIKIVSSC 745 (973)
Q Consensus 684 ~~~~lg~G~~g~Vy~~~~~~-~~~vav------K~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~ 745 (973)
..+.+| ||.||+|.+.. ..+||| |..+... .+....+.+|..+++..+|||+++.+++.
T Consensus 146 l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~ 213 (463)
T 3cxl_A 146 IYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFK 213 (463)
T ss_dssp STTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEE
T ss_pred ccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceE
Confidence 345676 99999999753 467888 6654322 22345788899999999999999987764
No 451
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=33.87 E-value=8.9 Score=26.70 Aligned_cols=7 Identities=71% Similarity=0.933 Sum_probs=2.8
Q ss_pred hhhhhhh
Q 048430 643 IILIRRR 649 (973)
Q Consensus 643 ~~~~~~~ 649 (973)
.++.|||
T Consensus 32 ~~~~RRR 38 (44)
T 2jwa_A 32 GILIKRR 38 (44)
T ss_dssp HHHHHHH
T ss_pred Hhheehh
Confidence 3344443
No 452
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=32.40 E-value=42 Score=28.22 Aligned_cols=45 Identities=18% Similarity=0.276 Sum_probs=21.5
Q ss_pred ccccCcchhcccCcccEEEeccccccccCCCcccccccceEEEccC
Q 048430 255 LSGIIPDSICNASEATILELSSNLFSGLVPNTFGNCRQLQILSLGD 300 (973)
Q Consensus 255 l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~ 300 (973)
++.+....|.++++|+.+.+-.+ ++.+...+|.++.+|+.+.+..
T Consensus 8 vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 8 VVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred cCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 33344445555555555555432 3334444555555555555443
No 453
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=28.75 E-value=4.9e+02 Score=30.27 Aligned_cols=45 Identities=22% Similarity=0.194 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHH--HHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeeccccc
Q 048430 777 RQRLDIMIDVAS--ALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAK 828 (973)
Q Consensus 777 ~~~~~i~~~i~~--~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~ 828 (973)
..+..+++++|- .+.|+= . =+|=.++|||++.+|.+.=+|||.+-
T Consensus 529 ~ar~nF~~SlA~~Svv~YIL---G----lGDRH~~NILid~tG~v~HIDFG~~f 575 (696)
T 2x6h_A 529 EVMDTYIKSCAGYCVITYLL---G----VGDRHLDNLLLTTNGKLFHIDFGYIL 575 (696)
T ss_dssp HHHHHHHHHHHHHHHHHHHH---T----CCCCCTTTEEECTTSCEEECCCCSCT
T ss_pred HHHHHHHHHHHHHHHHHHHc---c----CCCCCCcceEEeCCCCEEEEeehhhh
Confidence 455566665543 344444 1 25888999999999999999999874
No 454
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=25.74 E-value=1.3e+02 Score=25.10 Aligned_cols=37 Identities=14% Similarity=0.106 Sum_probs=14.8
Q ss_pred CCCCCCcccEEEeecCccccccCcccCCCCCCCEEEcc
Q 048430 366 GFGNLSNLLVLSLVNNELAGAIPTVLGKLQKLQGLDLN 403 (973)
Q Consensus 366 ~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls 403 (973)
+|.++.+|+.+.+..+ ++.+-..+|.++.+|+.+.+.
T Consensus 15 aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~ 51 (100)
T 2lz0_A 15 LFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILT 51 (100)
T ss_dssp TTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEEC
T ss_pred HhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEc
Confidence 3444444444444332 222333344444444444443
Done!