Query         048430
Match_columns 973
No_of_seqs    853 out of 6564
Neff          9.5 
Searched_HMMs 13730
Date          Mon Mar 25 16:25:28 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048430.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/048430hhsearch_scop -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d1sm2a_ d.144.1.7 (A:) Tyrosin 100.0 9.5E-50 6.9E-54  422.3  16.7  258  680-964     5-262 (263)
  2 d1uwha_ d.144.1.7 (A:) B-Raf k 100.0 1.8E-49 1.3E-53  421.8  18.3  263  679-966     7-275 (276)
  3 d1k2pa_ d.144.1.7 (A:) Bruton' 100.0 1.7E-48 1.2E-52  410.0  17.3  253  680-960     4-257 (258)
  4 d1jpaa_ d.144.1.7 (A:) ephb2 r 100.0 1.4E-48 1.1E-52  420.4  15.8  257  681-964    27-293 (299)
  5 d1yhwa1 d.144.1.7 (A:249-541)  100.0 4.6E-48 3.3E-52  413.5  19.2  250  680-957    20-270 (293)
  6 d1qpca_ d.144.1.7 (A:) Lymphoc 100.0 2.3E-48 1.7E-52  413.4  14.2  256  679-962    12-268 (272)
  7 d1nvra_ d.144.1.7 (A:) Cell cy 100.0 3.8E-48 2.8E-52  409.6  15.3  252  680-957     5-260 (271)
  8 d1u59a_ d.144.1.7 (A:) Tyrosin 100.0 1.1E-47 7.9E-52  409.7  17.8  260  681-968     9-276 (285)
  9 d2j4za1 d.144.1.7 (A:126-388)  100.0 5.8E-48 4.3E-52  406.7  14.1  246  680-957     6-255 (263)
 10 d1opja_ d.144.1.7 (A:) Abelson 100.0 5.7E-48 4.1E-52  413.1  14.0  258  678-962    15-274 (287)
 11 d2jfla1 d.144.1.7 (A:21-308) S 100.0 4.4E-48 3.2E-52  413.4  12.9  252  680-957    12-269 (288)
 12 d1mqba_ d.144.1.7 (A:) epha2 r 100.0 2.2E-47 1.6E-51  408.6  17.4  261  680-966     7-275 (283)
 13 d1xbba_ d.144.1.7 (A:) Tyrosin 100.0 2.7E-47   2E-51  405.6  16.5  255  686-969    13-275 (277)
 14 d2java1 d.144.1.7 (A:3-271) Se 100.0 3.2E-47 2.3E-51  402.8  13.1  253  680-957     4-266 (269)
 15 d1t4ha_ d.144.1.7 (A:) Protein 100.0 2.4E-46 1.8E-50  395.9  19.7  245  683-957    12-266 (270)
 16 d1s9ja_ d.144.1.7 (A:) Dual sp 100.0 5.1E-47 3.7E-51  413.6  12.5  271  679-957     5-298 (322)
 17 d1rjba_ d.144.1.7 (A:) Fl cyto 100.0 1.6E-46 1.2E-50  410.2  16.3  256  679-960    36-323 (325)
 18 d1mp8a_ d.144.1.7 (A:) Focal a 100.0 2.5E-46 1.8E-50  398.8  15.7  259  679-965     6-270 (273)
 19 d1a06a_ d.144.1.7 (A:) Calmodu 100.0 1.6E-46 1.2E-50  405.2  13.8  252  679-957     8-264 (307)
 20 d1koaa2 d.144.1.7 (A:5915-6264 100.0   1E-45 7.3E-50  405.8  20.1  253  679-957    25-280 (350)
 21 d1uu3a_ d.144.1.7 (A:) 3-phosp 100.0 8.8E-47 6.4E-51  402.9  11.3  249  680-957     8-261 (288)
 22 d1fmka3 d.144.1.7 (A:249-533)  100.0 3.3E-46 2.4E-50  397.8  14.7  256  679-962    16-272 (285)
 23 d1u5ra_ d.144.1.7 (A:) Serine/ 100.0 6.3E-46 4.6E-50  400.5  17.0  245  681-957    16-267 (309)
 24 d1koba_ d.144.1.7 (A:) Twitchi 100.0 1.5E-45 1.1E-49  404.7  20.2  253  679-957    28-283 (352)
 25 d1xkka_ d.144.1.7 (A:) EGF rec 100.0 1.5E-45 1.1E-49  401.2  16.8  260  680-967     9-276 (317)
 26 d1jksa_ d.144.1.7 (A:) Death-a 100.0 6.2E-45 4.5E-49  391.9  21.0  252  679-957     9-271 (293)
 27 d1lufa_ d.144.1.7 (A:) Musk ty 100.0 1.2E-45 8.5E-50  399.3  14.4  262  674-962     7-300 (301)
 28 d1byga_ d.144.1.7 (A:) Carboxy 100.0 9.1E-46 6.6E-50  389.6  12.2  250  680-963     7-259 (262)
 29 d1r0pa_ d.144.1.7 (A:) Hepatoc 100.0 4.6E-45 3.4E-49  394.8  17.3  258  685-968    32-298 (311)
 30 d1vjya_ d.144.1.7 (A:) Type I  100.0 8.8E-45 6.4E-49  391.8  18.9  278  680-964     3-298 (303)
 31 d1o6la_ d.144.1.7 (A:) Pkb kin 100.0 6.5E-45 4.8E-49  396.7  16.3  249  679-957     4-261 (337)
 32 d1ywna1 d.144.1.7 (A:818-1166) 100.0 1.6E-44 1.1E-48  390.7  19.2  264  675-964     8-297 (299)
 33 d1u46a_ d.144.1.7 (A:) Activat 100.0 2.5E-45 1.8E-49  389.5  11.5  255  680-961     8-272 (273)
 34 d1phka_ d.144.1.7 (A:) gamma-s 100.0 6.7E-44 4.9E-48  378.6  20.4  251  680-957     3-270 (277)
 35 d1fota_ d.144.1.7 (A:) cAMP-de 100.0 2.4E-44 1.8E-48  389.8  16.8  245  680-957     4-257 (316)
 36 d1o6ya_ d.144.1.7 (A:) Mycobac 100.0 2.5E-44 1.8E-48  384.4  15.5  259  679-962     6-275 (277)
 37 d1tkia_ d.144.1.7 (A:) Titin,  100.0 8.3E-44 6.1E-48  386.8  19.9  252  679-957     4-258 (321)
 38 d1t46a_ d.144.1.7 (A:) c-KIT r 100.0 1.1E-43 7.9E-48  385.4  20.8  261  679-964    22-308 (311)
 39 d1fvra_ d.144.1.7 (A:) Tie2 ki 100.0 2.3E-44 1.7E-48  390.3  13.7  257  680-965    10-287 (309)
 40 d1omwa3 d.144.1.7 (A:186-549)  100.0 1.7E-43 1.3E-47  390.6  19.3  250  679-957     3-265 (364)
 41 d1fgka_ d.144.1.7 (A:) Fibrobl 100.0 5.9E-44 4.3E-48  385.1  14.7  258  679-963    12-296 (299)
 42 d2ozaa1 d.144.1.7 (A:51-385) M 100.0 1.5E-43 1.1E-47  386.8  17.8  252  679-957    10-272 (335)
 43 d1rdqe_ d.144.1.7 (E:) cAMP-de 100.0 2.5E-43 1.8E-47  387.1  19.3  245  680-957    41-294 (350)
 44 d1xjda_ d.144.1.7 (A:) Protein 100.0 1.5E-43 1.1E-47  384.2  16.9  248  680-957     2-255 (320)
 45 d1gz8a_ d.144.1.7 (A:) Cyclin- 100.0 1.9E-43 1.4E-47  381.5  17.2  273  680-957     2-283 (298)
 46 d1ua2a_ d.144.1.7 (A:) Cell di 100.0 2.1E-43 1.5E-47  381.9  16.2  267  685-957     3-280 (299)
 47 d1p4oa_ d.144.1.7 (A:) Insulin 100.0 1.2E-43 8.5E-48  384.3  13.1  258  679-963    19-294 (308)
 48 d1ob3a_ d.144.1.7 (A:) Cyclin- 100.0 7.3E-43 5.3E-47  375.2  16.0  272  680-957     2-281 (286)
 49 d1xwsa_ d.144.1.7 (A:) Proto-o 100.0 1.5E-43 1.1E-47  376.6   8.8  240  680-957     4-255 (273)
 50 d1blxa_ d.144.1.7 (A:) Cyclin- 100.0 1.3E-42 9.7E-47  377.3  15.4  270  679-957     6-293 (305)
 51 d3blha1 d.144.1.7 (A:8-325) Ce 100.0 5.4E-41 3.9E-45  366.6  16.8  273  679-957     9-305 (318)
 52 d1csna_ d.144.1.7 (A:) Casein  100.0 3.1E-40 2.2E-44  354.8  21.9  262  680-965     5-280 (293)
 53 d1ckia_ d.144.1.7 (A:) Casein  100.0 1.8E-40 1.3E-44  358.9  20.2  259  680-963     7-278 (299)
 54 d1ogqa_ c.10.2.8 (A:) Polygala 100.0 9.9E-41 7.2E-45  364.3  17.9  287    1-303    10-303 (313)
 55 d1unla_ d.144.1.7 (A:) Cyclin- 100.0 1.5E-40 1.1E-44  359.0  18.1  272  680-957     2-283 (292)
 56 d1pmea_ d.144.1.7 (A:) MAP kin 100.0 1.2E-40 8.9E-45  367.1  17.6  273  679-957     7-295 (345)
 57 d1vzoa_ d.144.1.7 (A:) Ribosom 100.0 4.8E-41 3.5E-45  365.1  12.2  253  680-957    24-292 (322)
 58 d1q5ka_ d.144.1.7 (A:) Glycoge 100.0 2.8E-40 2.1E-44  364.9  18.0  267  681-957    21-303 (350)
 59 d3bqca1 d.144.1.7 (A:3-330) Pr 100.0 5.6E-40 4.1E-44  360.0  19.4  264  680-957    35-319 (328)
 60 d1cm8a_ d.144.1.7 (A:) MAP kin 100.0 7.3E-40 5.3E-44  361.8  19.4  265  679-957    17-301 (346)
 61 d2b1pa1 d.144.1.7 (A:46-400) c 100.0 2.4E-39 1.7E-43  358.2  18.2  268  680-957    17-311 (355)
 62 d2gfsa1 d.144.1.7 (A:5-352) MA 100.0 4.3E-39 3.1E-43  356.4  14.3  266  679-957    17-301 (348)
 63 d1q8ya_ d.144.1.7 (A:) Sky1p { 100.0 1.5E-34 1.1E-38  321.9  14.3  270  681-957    14-328 (362)
 64 d1ogqa_ c.10.2.8 (A:) Polygala 100.0 1.9E-32 1.4E-36  298.1  16.2  244  362-610    67-312 (313)
 65 d2omza2 c.10.2.1 (A:33-416) In 100.0 1.4E-28   1E-32  275.9  31.7  123  441-573   261-383 (384)
 66 d2omza2 c.10.2.1 (A:33-416) In 100.0   1E-28 7.4E-33  277.0  29.4  357  123-549    27-383 (384)
 67 d1xkua_ c.10.2.7 (A:) Decorin   99.9 4.5E-26 3.3E-30  246.4  29.5  253   28-337     5-257 (305)
 68 d1xkua_ c.10.2.7 (A:) Decorin   99.9 2.1E-25 1.6E-29  241.1  26.0  223  243-528    31-255 (305)
 69 d1ozna_ c.10.2.7 (A:) Reticulo  99.9 3.2E-25 2.4E-29  236.8  18.8  267  248-577    16-283 (284)
 70 d1ozna_ c.10.2.7 (A:) Reticulo  99.9 5.1E-25 3.7E-29  235.2  15.8  210  371-580    32-242 (284)
 71 d1p9ag_ c.10.2.7 (G:) von Will  99.9   4E-23 2.9E-27  217.8  18.1  202  369-577     8-209 (266)
 72 d1p9ag_ c.10.2.7 (G:) von Will  99.9 1.5E-22 1.1E-26  213.4  18.9  200   90-303     7-207 (266)
 73 d1jl5a_ c.10.2.6 (A:) Leucine   99.9 3.2E-20 2.3E-24  204.3  31.6   96   94-210    39-134 (353)
 74 d1jl5a_ c.10.2.6 (A:) Leucine   99.8   1E-19 7.3E-24  200.3  29.5   59  490-557   283-341 (353)
 75 d1zara2 d.144.1.9 (A:91-281) R  99.8 2.2E-21 1.6E-25  193.0   7.9  168  684-871     4-189 (191)
 76 d1xwdc1 c.10.2.7 (C:18-259) Fo  99.8 6.7E-19 4.9E-23  182.5  16.8  213   55-300    18-234 (242)
 77 d1z7xw1 c.10.1.1 (W:1-460) Rib  99.8 6.5E-22 4.7E-26  226.4  -9.5  160  370-529   254-440 (460)
 78 d1z7xw1 c.10.1.1 (W:1-460) Rib  99.8 5.3E-22 3.8E-26  227.2 -11.2  186  368-553   223-440 (460)
 79 d1h6ua2 c.10.2.1 (A:36-262) In  99.8 9.8E-19 7.1E-23  179.1  13.1  202   74-299    24-225 (227)
 80 d1xwdc1 c.10.2.7 (C:18-259) Fo  99.8 4.1E-18   3E-22  176.4  17.0  202  371-573    29-235 (242)
 81 d1w8aa_ c.10.2.7 (A:) Slit {Fr  99.8 2.1E-18 1.5E-22  171.4  13.1  157  420-580    30-187 (192)
 82 d1h6ua2 c.10.2.1 (A:36-262) In  99.7 2.4E-18 1.8E-22  176.1  13.7  148  369-528    61-208 (227)
 83 d1w8aa_ c.10.2.7 (A:) Slit {Fr  99.7 8.2E-18   6E-22  167.0  14.0  177  421-603    10-187 (192)
 84 d1h6ta2 c.10.2.1 (A:31-240) In  99.7 2.3E-17 1.7E-21  166.1  15.2  179   75-299    30-208 (210)
 85 d2omxa2 c.10.2.1 (A:37-235) In  99.7 4.4E-17 3.2E-21  162.6  15.3  118   75-209    24-141 (199)
 86 d1h6ta2 c.10.2.1 (A:31-240) In  99.7 4.9E-17 3.5E-21  163.8  14.9  181   50-276    29-209 (210)
 87 d2omxa2 c.10.2.1 (A:37-235) In  99.7 9.6E-17   7E-21  160.1  14.3  161  394-568    39-199 (199)
 88 d2astb2 c.10.1.3 (B:2136-2419)  99.5 4.2E-16   3E-20  164.7   2.0  211  118-343    46-267 (284)
 89 d1a9na_ c.10.2.4 (A:) Spliceso  99.5   6E-15 4.4E-19  140.8   8.4  125   91-226    16-145 (162)
 90 d2astb2 c.10.1.3 (B:2136-2419)  99.5 5.4E-15   4E-19  156.0   7.2  183  241-453    44-235 (284)
 91 d1dcea3 c.10.2.2 (A:444-567) R  99.5   6E-14 4.3E-18  127.1  12.2  102   72-180     1-103 (124)
 92 d1dcea3 c.10.2.2 (A:444-567) R  99.5 4.8E-14 3.5E-18  127.7  11.5  104   96-210     1-104 (124)
 93 d1a9na_ c.10.2.4 (A:) Spliceso  99.5 1.3E-14 9.6E-19  138.4   7.7  127  439-570    14-146 (162)
 94 d2ca6a1 c.10.1.2 (A:2-345) Rna  99.5 6.9E-16   5E-20  168.5  -1.7  252  285-576    25-315 (344)
 95 d2ca6a1 c.10.1.2 (A:2-345) Rna  99.5 2.9E-15 2.1E-19  163.4   1.2  199  261-480    25-256 (344)
 96 d1m9la_ c.10.3.1 (A:) Outer ar  99.3 3.4E-14 2.5E-18  140.6  -1.8  114  134-281    40-154 (198)
 97 d1m9la_ c.10.3.1 (A:) Outer ar  99.3 7.4E-14 5.4E-18  138.1  -1.5  114  411-529    40-154 (198)
 98 d2ifga3 c.10.2.7 (A:36-191) Hi  99.3 8.8E-12 6.4E-16  117.6  11.2   92   85-179    23-115 (156)
 99 d2ifga3 c.10.2.7 (A:36-191) Hi  99.2 7.8E-12 5.7E-16  118.0   9.6   67  485-552    50-116 (156)
100 d1koha1 c.10.2.3 (A:201-362) m  98.4 7.7E-09 5.6E-13   97.7  -2.6   83  487-569    61-152 (162)
101 d1koha1 c.10.2.3 (A:201-362) m  98.3 3.7E-08 2.7E-12   92.9   0.0   67  438-504    60-128 (162)
102 d1j7la_ d.144.1.6 (A:) Type II  98.3 1.9E-06 1.4E-10   88.2  12.2  150  673-829     7-213 (263)
103 d1pgva_ c.10.1.1 (A:) Tropomod  97.6 1.7E-05 1.3E-09   74.4   4.1   69  265-333    70-142 (167)
104 d1nd4a_ d.144.1.6 (A:) Aminogl  97.5 0.00011 7.8E-09   74.2   9.9  130  687-828    17-204 (255)
105 d1pgva_ c.10.1.1 (A:) Tropomod  97.5 3.7E-05 2.7E-09   72.0   5.1   88  369-456    13-113 (167)
106 d2pula1 d.144.1.6 (A:5-396) Me  96.9   0.001 7.3E-08   71.4   9.8   76  685-762    31-117 (392)
107 d1io0a_ c.10.1.1 (A:) Tropomod  96.7 4.2E-05 3.1E-09   71.6  -2.8   44  289-335    44-87  (166)
108 d1io0a_ c.10.1.1 (A:) Tropomod  96.6 0.00014   1E-08   67.9  -0.3   11  290-300    16-26  (166)
109 d1zyla1 d.144.1.6 (A:4-328) Rd  96.5  0.0021 1.5E-07   66.9   8.6  134  693-829    35-220 (325)
110 d2ppqa1 d.144.1.6 (A:5-320) Ho  96.2  0.0083 6.1E-07   61.9  10.6  157  669-828     2-212 (316)
111 d1nw1a_ d.144.1.8 (A:) Choline  95.6   0.013 9.2E-07   62.6   9.1   72  685-762    47-127 (395)
112 d1ntya1 a.87.1.1 (A:1231-1414)  23.8      46  0.0034   29.1   5.6   42  932-973   142-183 (184)

No 1  
>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=9.5e-50  Score=422.27  Aligned_cols=258  Identities=24%  Similarity=0.364  Sum_probs=203.8

Q ss_pred             cCCCCCccccccCceEEEEEEeCCCeEEEEEEEeccchhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEEEEecC
Q 048430          680 NGFGESNLLGSGSFDNVYKATLANGVSVAVKVFNLQEDRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALIMQYMP  759 (973)
Q Consensus       680 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~  759 (973)
                      ++|...+.||+|+||.||+|++.+++.||||+++... ...++|.+|++++++++||||++++|+|.+++..++||||++
T Consensus         5 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~~~   83 (263)
T d1sm2a_           5 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFME   83 (263)
T ss_dssp             SCEEEEEEEECCSSCCEEEEEETTTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCT
T ss_pred             HHcEEEEEEeeCCCeEEEEEEECCCCEEEEEEECCCc-CcHHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEEecC
Confidence            4677789999999999999999889999999987543 334689999999999999999999999999999999999999


Q ss_pred             CCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCCCCcccc
Q 048430          760 QGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGVDPVTQT  839 (973)
Q Consensus       760 ~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~  839 (973)
                      +|+|.+++......+++..+..++.|||+||+|||   +++|+||||||+||+++.++.+||+|||+++...........
T Consensus        84 ~g~L~~~l~~~~~~~~~~~~~~i~~qia~gl~~lH---~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~  160 (263)
T d1sm2a_          84 HGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST  160 (263)
T ss_dssp             TCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCTTCSGGGEEECGGGCEEECSCC--------------
T ss_pred             CCcHHHHhhccccCCCHHHHHHHHHHHHHHHHhhh---ccceeecccchhheeecCCCCeEecccchheeccCCCceeec
Confidence            99999999887778999999999999999999999   799999999999999999999999999999877544444444


Q ss_pred             cccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhcccccCCCCchhh
Q 048430          840 MTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLLSREDEED  919 (973)
Q Consensus       840 ~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  919 (973)
                      ...||+.|+|||.+....++.++|||||||++|||+|++.|+..... ...+...+.....                   
T Consensus       161 ~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~-~~~~~~~i~~~~~-------------------  220 (263)
T d1sm2a_         161 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS-NSEVVEDISTGFR-------------------  220 (263)
T ss_dssp             ----CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCC-HHHHHHHHHHTCC-------------------
T ss_pred             ceecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCC-HHHHHHHHHhcCC-------------------
Confidence            56789999999999999999999999999999999996555432111 1111111111100                   


Q ss_pred             hhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHHH
Q 048430          920 ADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIKKI  964 (973)
Q Consensus       920 ~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~~~  964 (973)
                         ...+..+++++.+++.+||+.||++||||+|++++|+++.+.
T Consensus       221 ---~~~p~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~i~es  262 (263)
T d1sm2a_         221 ---LYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAES  262 (263)
T ss_dssp             ---CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             ---CCCccccCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhC
Confidence               001123456789999999999999999999999999998763


No 2  
>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.8e-49  Score=421.83  Aligned_cols=263  Identities=27%  Similarity=0.434  Sum_probs=208.8

Q ss_pred             hcCCCCCccccccCceEEEEEEeCCCeEEEEEEEecc--chhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEEEE
Q 048430          679 TNGFGESNLLGSGSFDNVYKATLANGVSVAVKVFNLQ--EDRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALIMQ  756 (973)
Q Consensus       679 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  756 (973)
                      .++|...+.||+|+||+||+|+.+.  .||||+++..  .....+.|.+|+.++++++||||+++++++.+ +..++|||
T Consensus         7 ~~~~~~~~~lG~G~fg~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~~-~~~~lv~E   83 (276)
T d1uwha_           7 DGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA-PQLAIVTQ   83 (276)
T ss_dssp             TTCCCCCSEEEECSSCEEEEEESSS--EEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred             cccEEEEEEEeeCCCcEEEEEEECC--EEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEec-cEEEEEEe
Confidence            4678889999999999999998753  5999998654  34456789999999999999999999999865 46799999


Q ss_pred             ecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCCCC-
Q 048430          757 YMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGVDP-  835 (973)
Q Consensus       757 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~-  835 (973)
                      ||++|+|.+++...+..+++.++..|+.|||+||+|||   +++||||||||+|||++.++.+||+|||+|+....... 
T Consensus        84 y~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~gl~yLH---~~~ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~~~~~  160 (276)
T d1uwha_          84 WCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGS  160 (276)
T ss_dssp             CCCEEEHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETTSSEEECCCCCSCC-------
T ss_pred             cCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHh---cCCEeccccCHHHEEEcCCCCEEEccccceeeccccCCc
Confidence            99999999999877768999999999999999999999   78999999999999999999999999999987643322 


Q ss_pred             cccccccccccccCccCCCC---CCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhcccccC
Q 048430          836 VTQTMTLATIGYMAPEYGSE---GIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLL  912 (973)
Q Consensus       836 ~~~~~~~~~~~y~aPE~~~~---~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~  912 (973)
                      .......||+.|||||.+..   ..++.++|||||||++|||+||+.||....... .+...+......       +.. 
T Consensus       161 ~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~-~~~~~~~~~~~~-------p~~-  231 (276)
T d1uwha_         161 HQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD-QIIFMVGRGYLS-------PDL-  231 (276)
T ss_dssp             -----CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH-HHHHHHHHTSCC-------CCG-
T ss_pred             ccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHH-HHHHHHhcCCCC-------Ccc-
Confidence            23344579999999998753   458999999999999999999999997532221 111111111100       000 


Q ss_pred             CCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHHHHH
Q 048430          913 SREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIKKILT  966 (973)
Q Consensus       913 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~~~~~  966 (973)
                                ...+..+++++.+++.+||+.||++||||+|++++|+.+.+.++
T Consensus       232 ----------~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~il~~Le~l~~~~P  275 (276)
T d1uwha_         232 ----------SKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSLP  275 (276)
T ss_dssp             ----------GGSCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCC
T ss_pred             ----------hhccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHcCC
Confidence                      01122456789999999999999999999999999999987543


No 3  
>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.7e-48  Score=410.05  Aligned_cols=253  Identities=24%  Similarity=0.387  Sum_probs=215.1

Q ss_pred             cCCCCCccccccCceEEEEEEeCCCeEEEEEEEeccchhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEEEEecC
Q 048430          680 NGFGESNLLGSGSFDNVYKATLANGVSVAVKVFNLQEDRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALIMQYMP  759 (973)
Q Consensus       680 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~  759 (973)
                      ++|...++||+|+||+||+|+.++++.||||+++.... ..++|.+|+.++++++||||++++|+|.+++..++||||++
T Consensus         4 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~-~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey~~   82 (258)
T d1k2pa_           4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMA   82 (258)
T ss_dssp             CCCCCCCCCCEETTEEEEEEEETTTEEEEEEEEESSSS-CHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEECCT
T ss_pred             HHCEEeEEEecCCCeEEEEEEECCCCEEEEEEECcCcC-CHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEccC
Confidence            57889999999999999999999899999999976543 34689999999999999999999999999999999999999


Q ss_pred             CCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCCCCcccc
Q 048430          760 QGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGVDPVTQT  839 (973)
Q Consensus       760 ~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~  839 (973)
                      +|+|..++......+++..+.+++.|+|+||+|||   +.+|+||||||+||+++.++.+||+|||+++...........
T Consensus        83 ~g~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~~LH---~~~iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~  159 (258)
T d1k2pa_          83 NGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSV  159 (258)
T ss_dssp             TEEHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHH---HTTBCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSSCCCCC
T ss_pred             CCcHHHhhhccccCCcHHHHHHHHHHHHHHHHHHh---hcCcccccccceeEEEcCCCcEEECcchhheeccCCCceeec
Confidence            99999998877778999999999999999999999   789999999999999999999999999999876554444444


Q ss_pred             cccccccccCccCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCccccCcccHHHHHHhhCCcchhhhcccccCCCCchh
Q 048430          840 MTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFT-RRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLLSREDEE  918 (973)
Q Consensus       840 ~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  918 (973)
                      ...+|+.|+|||.+....++.++|||||||++|||+| |+.||......+  +...+..   +         ..      
T Consensus       160 ~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~--~~~~i~~---~---------~~------  219 (258)
T d1k2pa_         160 GSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE--TAEHIAQ---G---------LR------  219 (258)
T ss_dssp             CSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHH--HHHHHHT---T---------CC------
T ss_pred             ccCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHHH--HHHHHHh---C---------CC------
Confidence            5679999999999999999999999999999999998 798986543211  1111111   0         00      


Q ss_pred             hhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHH
Q 048430          919 DADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKK  960 (973)
Q Consensus       919 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~  960 (973)
                          ...+..+++++.+++.+||+.||++|||++|++++|.+
T Consensus       220 ----~~~p~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~d  257 (258)
T d1k2pa_         220 ----LYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILD  257 (258)
T ss_dssp             ----CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHC
T ss_pred             ----CCCcccccHHHHHHHHHHccCCHhHCcCHHHHHHHhhC
Confidence                01112345679999999999999999999999999864


No 4  
>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00  E-value=1.4e-48  Score=420.39  Aligned_cols=257  Identities=22%  Similarity=0.397  Sum_probs=200.7

Q ss_pred             CCCCCccccccCceEEEEEEeC-C---CeEEEEEEEecc-chhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEEE
Q 048430          681 GFGESNLLGSGSFDNVYKATLA-N---GVSVAVKVFNLQ-EDRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALIM  755 (973)
Q Consensus       681 ~~~~~~~lg~G~~g~Vy~~~~~-~---~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~  755 (973)
                      +|...++||+|+||+||+|+.. +   ...||||.+... .....+.|.+|++++++++|||||+++|+|.+++..++||
T Consensus        27 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~iv~  106 (299)
T d1jpaa_          27 CVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIIT  106 (299)
T ss_dssp             GEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred             hcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEEE
Confidence            3445689999999999999864 2   336899987654 3345678999999999999999999999999999999999


Q ss_pred             EecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCCCC
Q 048430          756 QYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGVDP  835 (973)
Q Consensus       756 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~  835 (973)
                      |||++|+|.+++......+++.++..++.|||+||+|||   +++|+||||||+|||++.++.+||+|||+|+.......
T Consensus       107 Ey~~~g~L~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~  183 (299)
T d1jpaa_         107 EFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLA---DMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTS  183 (299)
T ss_dssp             ECCTTEEHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC-----------
T ss_pred             EecCCCcceeeeccccCCCCHHHHHHHHHHHHHHHHHHh---hCCCccCccccceEEECCCCcEEECCcccceEccCCCC
Confidence            999999999999887768999999999999999999999   79999999999999999999999999999987643222


Q ss_pred             c----ccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCccccCcccHHHHHHhhCCcchhhhcccc
Q 048430          836 V----TQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFT-RRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDAN  910 (973)
Q Consensus       836 ~----~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  910 (973)
                      .    ......+|+.|||||.+.++.++.++|||||||++|||+| |+.||......  .+...+...            
T Consensus       184 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~--~~~~~i~~~------------  249 (299)
T d1jpaa_         184 DPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQ--DVINAIEQD------------  249 (299)
T ss_dssp             ------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHHHHHHTT------------
T ss_pred             cceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCCHH--HHHHHHHcC------------
Confidence            1    1122457899999999999999999999999999999998 89998653221  111111110            


Q ss_pred             cCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHHH
Q 048430          911 LLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIKKI  964 (973)
Q Consensus       911 l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~~~  964 (973)
                      .          +.+.+..+++++.+++.+||+.||++||||+|+++.|+++.+.
T Consensus       250 ~----------~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~L~~~l~~  293 (299)
T d1jpaa_         250 Y----------RLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIRN  293 (299)
T ss_dssp             C----------CCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred             C----------CCCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhcC
Confidence            0          0011224567799999999999999999999999999988653


No 5  
>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=4.6e-48  Score=413.55  Aligned_cols=250  Identities=24%  Similarity=0.327  Sum_probs=210.4

Q ss_pred             cCCCCCccccccCceEEEEEEe-CCCeEEEEEEEeccchhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEEEEec
Q 048430          680 NGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQEDRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALIMQYM  758 (973)
Q Consensus       680 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~  758 (973)
                      ++|...+.||+|+||+||+|+. .+|+.||||+++.......+.+.+|++++++++||||+++++++.+++..++|||||
T Consensus        20 ~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~   99 (293)
T d1yhwa1          20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL   99 (293)
T ss_dssp             TTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             cccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEEEec
Confidence            4699999999999999999985 579999999998766556678999999999999999999999999999999999999


Q ss_pred             CCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCCCCccc
Q 048430          759 PQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGVDPVTQ  838 (973)
Q Consensus       759 ~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~  838 (973)
                      ++|+|.+++...  .+++.++..++.||+.||+|||   +++||||||||+|||++.++.+||+|||+|+...... ...
T Consensus       100 ~gg~L~~~~~~~--~l~~~~~~~i~~qi~~aL~yLH---~~~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~-~~~  173 (293)
T d1yhwa1         100 AGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ-SKR  173 (293)
T ss_dssp             TTCBHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTT-CCB
T ss_pred             CCCcHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHH---HCCCcccCCcHHHeEECCCCcEeeccchhheeecccc-ccc
Confidence            999999988765  5999999999999999999999   7999999999999999999999999999998765432 233


Q ss_pred             ccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhcccccCCCCchh
Q 048430          839 TMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLLSREDEE  918 (973)
Q Consensus       839 ~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  918 (973)
                      ...+||+.|+|||.+.+..++.++||||+||++|||++|+.||......+ .+........+                  
T Consensus       174 ~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~-~~~~~~~~~~~------------------  234 (293)
T d1yhwa1         174 STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR-ALYLIATNGTP------------------  234 (293)
T ss_dssp             CCCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHHHHHHHCSC------------------
T ss_pred             cccccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHHH-HHHHHHhCCCC------------------
Confidence            45579999999999999999999999999999999999999996432111 11111111000                  


Q ss_pred             hhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430          919 DADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD  957 (973)
Q Consensus       919 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~  957 (973)
                         ....+..+++++.+++.+||+.||++|||++|+++|
T Consensus       235 ---~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~H  270 (293)
T d1yhwa1         235 ---ELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQH  270 (293)
T ss_dssp             ---CCSSGGGSCHHHHHHHHHHTCSSTTTSCCHHHHTTC
T ss_pred             ---CCCCcccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence               001122346678999999999999999999999875


No 6  
>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.3e-48  Score=413.42  Aligned_cols=256  Identities=25%  Similarity=0.410  Sum_probs=210.0

Q ss_pred             hcCCCCCccccccCceEEEEEEeCCCeEEEEEEEeccchhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEEEEec
Q 048430          679 TNGFGESNLLGSGSFDNVYKATLANGVSVAVKVFNLQEDRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALIMQYM  758 (973)
Q Consensus       679 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~  758 (973)
                      .++|...+.||+|+||.||+|++++++.||||+++... ...+.|.+|++++++++|||||++++++.+ +..++||||+
T Consensus        12 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~-~~~~iv~Ey~   89 (272)
T d1qpca_          12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYM   89 (272)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEECC
T ss_pred             HHHeEEeEEEecCCCcEEEEEEECCCCEEEEEEEccCc-CCHHHHHHHHHHHHhCCCCCEeEEEeeecc-CCeEEEEEeC
Confidence            45677889999999999999999889999999997543 334689999999999999999999998865 5678999999


Q ss_pred             CCCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCCCCcc
Q 048430          759 PQGSLEKWLYSHN-YSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGVDPVT  837 (973)
Q Consensus       759 ~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~  837 (973)
                      ++|+|.+++.... ..+++.++..|+.||++||.|||   +++|+||||||+|||+++++.+||+|||+|+.........
T Consensus        90 ~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH---~~~ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~~~~~  166 (272)
T d1qpca_          90 ENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTA  166 (272)
T ss_dssp             TTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEEC
T ss_pred             CCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCccchhheeeecccceeeccccceEEccCCcccc
Confidence            9999999876543 35899999999999999999999   7999999999999999999999999999999876544444


Q ss_pred             cccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhcccccCCCCch
Q 048430          838 QTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLLSREDE  917 (973)
Q Consensus       838 ~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~  917 (973)
                      .....||+.|+|||.+.++.++.++|||||||++|||+||+.|+...... ....+.+....                  
T Consensus       167 ~~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~-~~~~~~i~~~~------------------  227 (272)
T d1qpca_         167 REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN-PEVIQNLERGY------------------  227 (272)
T ss_dssp             CTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCH-HHHHHHHHTTC------------------
T ss_pred             ccccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCH-HHHHHHHHhcC------------------
Confidence            45567899999999998889999999999999999999976665432211 11111111100                  


Q ss_pred             hhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHH
Q 048430          918 EDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIK  962 (973)
Q Consensus       918 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~  962 (973)
                          +...+..+++++.+++.+||+.||++||||+|+++.|+.+-
T Consensus       228 ----~~~~p~~~~~~l~~li~~cl~~~P~~Rpt~~ei~~~L~~~f  268 (272)
T d1qpca_         228 ----RMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFF  268 (272)
T ss_dssp             ----CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             ----CCCCcccChHHHHHHHHHHcCCCHhHCcCHHHHHHHhhhhh
Confidence                00111235667899999999999999999999999998764


No 7  
>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=3.8e-48  Score=409.64  Aligned_cols=252  Identities=22%  Similarity=0.321  Sum_probs=205.1

Q ss_pred             cCCCCCccccccCceEEEEEEe-CCCeEEEEEEEeccch-hhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEEEEe
Q 048430          680 NGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQED-RALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALIMQY  757 (973)
Q Consensus       680 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  757 (973)
                      ++|...+.||+|+||+||+|+. .+|+.||||+++.... ...+.+.+|++++++++||||+++++++.+++..++||||
T Consensus         5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivmEy   84 (271)
T d1nvra_           5 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY   84 (271)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             cceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEEec
Confidence            5688899999999999999996 5799999999876532 3346789999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCCCC-c
Q 048430          758 MPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGVDP-V  836 (973)
Q Consensus       758 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~-~  836 (973)
                      +++|+|.+++.... .+++.++..++.||+.||+|||   +++|+||||||+|||+++++.+||+|||+|+....... .
T Consensus        85 ~~gg~L~~~l~~~~-~l~e~~~~~i~~qi~~al~ylH---~~~IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~~~~  160 (271)
T d1nvra_          85 CSGGELFDRIEPDI-GMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER  160 (271)
T ss_dssp             CTTEEGGGGSBTTT-BCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCEECEETTEEC
T ss_pred             cCCCcHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHH---HcCCccCcccHHHEEECCCCCEEEccchhheeeccCCccc
Confidence            99999999997654 7999999999999999999999   79999999999999999999999999999987643322 2


Q ss_pred             ccccccccccccCccCCCCCCC-CcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhcccccCCCC
Q 048430          837 TQTMTLATIGYMAPEYGSEGIV-SISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLLSRE  915 (973)
Q Consensus       837 ~~~~~~~~~~y~aPE~~~~~~~-~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~  915 (973)
                      .....+||+.|||||.+.+..+ +.++||||+||++|||++|+.||............+......               
T Consensus       161 ~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~~~~~~~~~---------------  225 (271)
T d1nvra_         161 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY---------------  225 (271)
T ss_dssp             CBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHHHHHTTCTT---------------
T ss_pred             cccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCC---------------
Confidence            2345679999999998877765 678999999999999999999997543332222221110000               


Q ss_pred             chhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430          916 DEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD  957 (973)
Q Consensus       916 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~  957 (973)
                             ......+++++.+++.+||+.||++|||++|+++|
T Consensus       226 -------~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~h  260 (271)
T d1nvra_         226 -------LNPWKKIDSAPLALLHKILVENPSARITIPDIKKD  260 (271)
T ss_dssp             -------STTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             -------CCccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence                   00112245668899999999999999999999875


No 8  
>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.1e-47  Score=409.73  Aligned_cols=260  Identities=21%  Similarity=0.360  Sum_probs=212.5

Q ss_pred             CCCCCc-cccccCceEEEEEEeC---CCeEEEEEEEeccc-hhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEEE
Q 048430          681 GFGESN-LLGSGSFDNVYKATLA---NGVSVAVKVFNLQE-DRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALIM  755 (973)
Q Consensus       681 ~~~~~~-~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~  755 (973)
                      +|...+ +||+|+||+||+|...   ++..||||+++... ....+.|.+|++++++++|||||+++|+|.. +..++||
T Consensus         9 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-~~~~lvm   87 (285)
T d1u59a_           9 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVM   87 (285)
T ss_dssp             GEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEE
T ss_pred             CeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeecc-CeEEEEE
Confidence            344455 4999999999999753   46689999997553 3446789999999999999999999999975 4679999


Q ss_pred             EecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCCCC
Q 048430          756 QYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGVDP  835 (973)
Q Consensus       756 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~  835 (973)
                      |||++|+|.+++...+..+++.++..++.|||+||+|||   +++|+||||||+||+++.++.+||+|||+|+.......
T Consensus        88 E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~ylH---~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~  164 (285)
T d1u59a_          88 EMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDS  164 (285)
T ss_dssp             ECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSC
T ss_pred             EeCCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCcCchhheeeccCCceeeccchhhhccccccc
Confidence            999999999998877668999999999999999999999   79999999999999999999999999999987754333


Q ss_pred             c--ccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCccccCcccHHHHHHhhCCcchhhhcccccC
Q 048430          836 V--TQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFT-RRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLL  912 (973)
Q Consensus       836 ~--~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~  912 (973)
                      .  ......||+.|+|||.+..+.++.++|||||||++|||+| |+.||......  .+...+....             
T Consensus       165 ~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~--~~~~~i~~~~-------------  229 (285)
T d1u59a_         165 YYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP--EVMAFIEQGK-------------  229 (285)
T ss_dssp             EECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH--HHHHHHHTTC-------------
T ss_pred             ccccccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCHH--HHHHHHHcCC-------------
Confidence            2  2234468999999999988899999999999999999998 89999753221  1222221100             


Q ss_pred             CCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHHHHHhh
Q 048430          913 SREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIKKILTQA  968 (973)
Q Consensus       913 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~~~~~~~  968 (973)
                               +...+..+++++.+++.+||+.+|++||||.+|++.|+.+...+...
T Consensus       230 ---------~~~~p~~~~~~l~~li~~cl~~~p~~RPs~~~i~~~L~~~~~~~~~~  276 (285)
T d1u59a_         230 ---------RMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASK  276 (285)
T ss_dssp             ---------CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHTT
T ss_pred             ---------CCCCCCcCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHHhhhc
Confidence                     00112345678999999999999999999999999999887665543


No 9  
>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=5.8e-48  Score=406.70  Aligned_cols=246  Identities=22%  Similarity=0.327  Sum_probs=207.1

Q ss_pred             cCCCCCccccccCceEEEEEEe-CCCeEEEEEEEeccc---hhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEEE
Q 048430          680 NGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQE---DRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALIM  755 (973)
Q Consensus       680 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~  755 (973)
                      ++|...+.||+|+||+||+|+. .+++.||+|++....   ....+.+.+|++++++++||||+++++++.+++..++||
T Consensus         6 ~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ivm   85 (263)
T d2j4za1           6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLIL   85 (263)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEEEEE
Confidence            5688889999999999999996 478999999987442   334577899999999999999999999999999999999


Q ss_pred             EecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCCCC
Q 048430          756 QYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGVDP  835 (973)
Q Consensus       756 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~  835 (973)
                      |||++|+|.+++.... .+++.++..++.||+.||+|||   +++||||||||+|||++.++.+||+|||+|+.....  
T Consensus        86 Ey~~~g~L~~~l~~~~-~l~e~~~~~i~~qi~~al~~lH---~~~ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~~--  159 (263)
T d2j4za1          86 EYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS--  159 (263)
T ss_dssp             ECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCCSCSCCCCC--
T ss_pred             eecCCCcHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeeeeeccccceecCCCCEeecccceeeecCCC--
Confidence            9999999999998765 6999999999999999999999   799999999999999999999999999999865432  


Q ss_pred             cccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhcccccCCCC
Q 048430          836 VTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLLSRE  915 (973)
Q Consensus       836 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~  915 (973)
                       ......||+.|||||.+.+..++.++|||||||++|||++|+.||.....     ...........        .    
T Consensus       160 -~~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~-----~~~~~~i~~~~--------~----  221 (263)
T d2j4za1         160 -RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY-----QETYKRISRVE--------F----  221 (263)
T ss_dssp             -CCEETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSH-----HHHHHHHHTTC--------C----
T ss_pred             -cccccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCH-----HHHHHHHHcCC--------C----
Confidence             23345799999999999999999999999999999999999999965221     11111111100        0    


Q ss_pred             chhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430          916 DEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD  957 (973)
Q Consensus       916 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~  957 (973)
                              ..+..+++++.+++.+||+.||++|||++|+++|
T Consensus       222 --------~~p~~~s~~~~~li~~~L~~dp~~R~t~~eil~h  255 (263)
T d2j4za1         222 --------TFPDFVTEGARDLISRLLKHNPSQRPMLREVLEH  255 (263)
T ss_dssp             --------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred             --------CCCccCCHHHHHHHHHHccCCHhHCcCHHHHHcC
Confidence                    0112245678899999999999999999999986


No 10 
>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00  E-value=5.7e-48  Score=413.15  Aligned_cols=258  Identities=22%  Similarity=0.378  Sum_probs=214.0

Q ss_pred             HhcCCCCCccccccCceEEEEEEeC-CCeEEEEEEEeccchhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEEEE
Q 048430          678 ATNGFGESNLLGSGSFDNVYKATLA-NGVSVAVKVFNLQEDRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALIMQ  756 (973)
Q Consensus       678 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  756 (973)
                      ..++|...+.||+|+||+||+|+.. +++.||||+++... ...++|.+|++++++++|||||+++++|.+++..++|||
T Consensus        15 ~~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~-~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv~E   93 (287)
T d1opja_          15 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE   93 (287)
T ss_dssp             CGGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTC-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred             cHHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCcc-chHHHHHHHHHHHHhCCCCCEecCCccEeeCCeeEEEee
Confidence            3457888899999999999999965 68999999986543 335789999999999999999999999999999999999


Q ss_pred             ecCCCCHHHHhhhC-CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCCCC
Q 048430          757 YMPQGSLEKWLYSH-NYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGVDP  835 (973)
Q Consensus       757 ~~~~gsL~~~l~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~  835 (973)
                      ||++|+|.+++... ...+++..+..++.|||+||+|||   +++|+||||||+|||+++++.+||+|||+|+.......
T Consensus        94 ~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH---~~~iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~~~~~  170 (287)
T d1opja_          94 FMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY  170 (287)
T ss_dssp             CCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCCCTTTCCSSSS
T ss_pred             cccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHH---HCCcccCccccCeEEECCCCcEEEccccceeecCCCCc
Confidence            99999999999764 357899999999999999999999   78999999999999999999999999999997765444


Q ss_pred             cccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhcccccCCCC
Q 048430          836 VTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLLSRE  915 (973)
Q Consensus       836 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~  915 (973)
                      .......|++.|+|||.+.+..++.++|||||||++|||++|+.||...... ..+...+..            ...   
T Consensus       171 ~~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~-~~~~~~i~~------------~~~---  234 (287)
T d1opja_         171 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL-SQVYELLEK------------DYR---  234 (287)
T ss_dssp             EEETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCH-HHHHHHHHT------------TCC---
T ss_pred             eeeccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcchH-HHHHHHHhc------------CCC---
Confidence            4445556899999999999999999999999999999999987776432111 111111111            110   


Q ss_pred             chhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHH
Q 048430          916 DEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIK  962 (973)
Q Consensus       916 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~  962 (973)
                             ...+..+++++.+++.+||+.||++|||++|+++.|+.+.
T Consensus       235 -------~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ei~~~L~~~~  274 (287)
T d1opja_         235 -------MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF  274 (287)
T ss_dssp             -------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred             -------CCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence                   0111235677999999999999999999999999998764


No 11 
>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=4.4e-48  Score=413.43  Aligned_cols=252  Identities=24%  Similarity=0.335  Sum_probs=208.6

Q ss_pred             cCCCCCccccccCceEEEEEEe-CCCeEEEEEEEeccchhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEEEEec
Q 048430          680 NGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQEDRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALIMQYM  758 (973)
Q Consensus       680 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~  758 (973)
                      +.|+..+.||+|+||+||+|+. .+++.||||+++.......+.+.+|++++++++||||+++++++.+++..++|||||
T Consensus        12 d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmEy~   91 (288)
T d2jfla1          12 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFC   91 (288)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             cCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEecC
Confidence            4578889999999999999996 578999999998766666788999999999999999999999999999999999999


Q ss_pred             CCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCCCCccc
Q 048430          759 PQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGVDPVTQ  838 (973)
Q Consensus       759 ~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~  838 (973)
                      ++|+|.+++......+++.++..++.||+.||.|||   +++||||||||+|||++.++.+||+|||+|+..... ....
T Consensus        92 ~~g~L~~~~~~~~~~l~e~~~~~i~~qi~~gL~ylH---~~~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~-~~~~  167 (288)
T d2jfla1          92 AGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRT-IQRR  167 (288)
T ss_dssp             TTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECHHH-HHHH
T ss_pred             CCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCEEEeecChhheeECCCCCEEEEechhhhccCCC-cccc
Confidence            999999998776557999999999999999999999   799999999999999999999999999999764321 1123


Q ss_pred             ccccccccccCccCC-----CCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhcccccCC
Q 048430          839 TMTLATIGYMAPEYG-----SEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLLS  913 (973)
Q Consensus       839 ~~~~~~~~y~aPE~~-----~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~  913 (973)
                      ....||+.|+|||.+     ....++.++|||||||++|||++|+.||......+ .+........+             
T Consensus       168 ~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~-~~~~i~~~~~~-------------  233 (288)
T d2jfla1         168 DSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMR-VLLKIAKSEPP-------------  233 (288)
T ss_dssp             TCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGG-HHHHHHHSCCC-------------
T ss_pred             cccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHH-HHHHHHcCCCC-------------
Confidence            346799999999976     34568999999999999999999999997543221 11111111000             


Q ss_pred             CCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430          914 REDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD  957 (973)
Q Consensus       914 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~  957 (973)
                              ....+..+++++.+++.+||+.||++|||++|+++|
T Consensus       234 --------~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~ell~h  269 (288)
T d2jfla1         234 --------TLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQH  269 (288)
T ss_dssp             --------CCSSGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred             --------CCCccccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence                    001122356778999999999999999999999985


No 12 
>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.2e-47  Score=408.62  Aligned_cols=261  Identities=25%  Similarity=0.418  Sum_probs=205.9

Q ss_pred             cCCCCCccccccCceEEEEEEeCCC-----eEEEEEEEeccc-hhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEE
Q 048430          680 NGFGESNLLGSGSFDNVYKATLANG-----VSVAVKVFNLQE-DRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKAL  753 (973)
Q Consensus       680 ~~~~~~~~lg~G~~g~Vy~~~~~~~-----~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l  753 (973)
                      +.|...++||+|+||.||+|.++..     ..||||+++... ....+.|.+|++++++++|||||+++|++.+.+..++
T Consensus         7 ~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~~~   86 (283)
T d1mqba_           7 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI   86 (283)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCceEE
Confidence            4577789999999999999986532     479999987543 3345679999999999999999999999999999999


Q ss_pred             EEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCC
Q 048430          754 IMQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGV  833 (973)
Q Consensus       754 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~  833 (973)
                      ||||+.+|++.+++......+++.++..++.||+.||+|||   +++|+||||||+|||++.++.+||+|||+++.....
T Consensus        87 v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~gl~~lH---~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~  163 (283)
T d1mqba_          87 ITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLA---NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD  163 (283)
T ss_dssp             EEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCCCC-------
T ss_pred             EEEecccCcchhhhhcccccccHHHHHHHHHHHHHhhhhcc---ccccccCccccceEEECCCCeEEEcccchhhcccCC
Confidence            99999999999999887778999999999999999999999   799999999999999999999999999999876433


Q ss_pred             CCc--ccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhccccc
Q 048430          834 DPV--TQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANL  911 (973)
Q Consensus       834 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l  911 (973)
                      ...  ......||+.|+|||.+..+.++.++|||||||++|||++|+.|+....... .+...+..            ..
T Consensus       164 ~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~-~~~~~i~~------------~~  230 (283)
T d1mqba_         164 PEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNH-EVMKAIND------------GF  230 (283)
T ss_dssp             ----------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-HHHHHHHT------------TC
T ss_pred             CccceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCCHH-HHHHHHhc------------cC
Confidence            222  2233468999999999999999999999999999999999777654322111 11111111            10


Q ss_pred             CCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHHHHH
Q 048430          912 LSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIKKILT  966 (973)
Q Consensus       912 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~~~~~  966 (973)
                      .          .+.+..++.++.+++.+||+.||++||+|.||++.|+++.+.-.
T Consensus       231 ~----------~~~~~~~~~~l~~li~~cl~~~p~~RPt~~eil~~L~~l~~~p~  275 (283)
T d1mqba_         231 R----------LPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPD  275 (283)
T ss_dssp             C----------CCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSGG
T ss_pred             C----------CCCchhhHHHHHHHHHHHCcCCHhHCcCHHHHHHHHHHHhhCcc
Confidence            0          01112356678999999999999999999999999999887543


No 13 
>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.7e-47  Score=405.60  Aligned_cols=255  Identities=24%  Similarity=0.357  Sum_probs=205.3

Q ss_pred             ccccccCceEEEEEEeC---CCeEEEEEEEecc--chhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEEEEecCC
Q 048430          686 NLLGSGSFDNVYKATLA---NGVSVAVKVFNLQ--EDRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALIMQYMPQ  760 (973)
Q Consensus       686 ~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~  760 (973)
                      ++||+|+||+||+|.+.   .++.||||+++..  .....+.|.+|++++++++||||++++++|.. +..++||||+++
T Consensus        13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~-~~~~lvmE~~~~   91 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL   91 (277)
T ss_dssp             EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred             CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEecc-CCEEEEEEcCCC
Confidence            57999999999999853   3578999998643  23345789999999999999999999999965 457899999999


Q ss_pred             CCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCCCCcc--c
Q 048430          761 GSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGVDPVT--Q  838 (973)
Q Consensus       761 gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~--~  838 (973)
                      |+|.+++.... .+++.++..++.||++||+|||   +++||||||||+||+++.++.+||+|||+++.........  .
T Consensus        92 g~L~~~l~~~~-~l~~~~~~~i~~qi~~gl~ylH---~~~iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~  167 (277)
T d1xbba_          92 GPLNKYLQQNR-HVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ  167 (277)
T ss_dssp             EEHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC-
T ss_pred             CcHHHHHhhcc-CCCHHHHHHHHHHHHHHHhhHH---hCCcccCCCcchhhcccccCcccccchhhhhhccccccccccc
Confidence            99999998765 7999999999999999999999   7899999999999999999999999999998765433322  2


Q ss_pred             ccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCccccCcccHHHHHHhhCCcchhhhcccccCCCCch
Q 048430          839 TMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFT-RRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLLSREDE  917 (973)
Q Consensus       839 ~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~  917 (973)
                      ....||+.|+|||.+.+..++.++|||||||++|||+| |+.||.+....  .+...+..   +.               
T Consensus       168 ~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~--~~~~~i~~---~~---------------  227 (277)
T d1xbba_         168 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS--EVTAMLEK---GE---------------  227 (277)
T ss_dssp             ---CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--HHHHHHHT---TC---------------
T ss_pred             cccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCHH--HHHHHHHc---CC---------------
Confidence            33468999999999988999999999999999999998 89998753211  11111111   00               


Q ss_pred             hhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHHHHHhhc
Q 048430          918 EDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIKKILTQAL  969 (973)
Q Consensus       918 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~~~~~~~~  969 (973)
                          +...+..+++++.+++.+||+.||++|||++||++.|+.+-.+.-++.
T Consensus       228 ----~~~~p~~~~~~~~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~~~~e~  275 (277)
T d1xbba_         228 ----RMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVNEG  275 (277)
T ss_dssp             ----CCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHHHHHH
T ss_pred             ----CCCCCcccCHHHHHHHHHHcCCCHhHCcCHHHHHHHhhCHHhhcCCCC
Confidence                011123456789999999999999999999999999988766554443


No 14 
>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=3.2e-47  Score=402.82  Aligned_cols=253  Identities=21%  Similarity=0.298  Sum_probs=193.7

Q ss_pred             cCCCCCccccccCceEEEEEEe-CCCeEEEEEEEeccc--hhhHHHHHHHHHHHHhccCCceeEEEeeeec--CCeeEEE
Q 048430          680 NGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQE--DRALKSFDTECEVMRRIRHRNLIKIVSSCSN--PGFKALI  754 (973)
Q Consensus       680 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~lv  754 (973)
                      ++|...+.||+|+||+||+|+. .+|+.||||+++...  +...+.+.+|++++++++||||+++++++.+  .+..++|
T Consensus         4 edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~iv   83 (269)
T d2java1           4 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIV   83 (269)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEEE
T ss_pred             hhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEEE
Confidence            5788899999999999999985 578999999987553  3445778999999999999999999999864  4568999


Q ss_pred             EEecCCCCHHHHhhhC---CCCCCHHHHHHHHHHHHHHHHHhhhcC--CCCeEEccCCCCcEEeCCCCcEEEeecccccc
Q 048430          755 MQYMPQGSLEKWLYSH---NYSLTIRQRLDIMIDVASALEYLHHGY--STPIIHCDLKPNNVLLDDDMVAHLGDFGIAKL  829 (973)
Q Consensus       755 ~e~~~~gsL~~~l~~~---~~~l~~~~~~~i~~~i~~~L~~LH~~~--~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~  829 (973)
                      ||||++|+|.+++...   ...+++..++.++.||+.||+|||+..  ..+||||||||+|||++.++.+||+|||+|+.
T Consensus        84 mEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a~~  163 (269)
T d2java1          84 MEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI  163 (269)
T ss_dssp             EECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHHHHHH
T ss_pred             EecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeeccceee
Confidence            9999999999998642   347999999999999999999999421  13499999999999999999999999999987


Q ss_pred             cCCCCCcccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhccc
Q 048430          830 LDGVDPVTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDA  909 (973)
Q Consensus       830 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  909 (973)
                      ..... .......||+.|||||.+.+..++.++|||||||++|||+||+.||.....  ..+...+..           .
T Consensus       164 ~~~~~-~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~--~~~~~~i~~-----------~  229 (269)
T d2java1         164 LNHDT-SFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ--KELAGKIRE-----------G  229 (269)
T ss_dssp             C------------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHHHH-----------T
T ss_pred             cccCC-CccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCCH--HHHHHHHHc-----------C
Confidence            65322 223446799999999999999999999999999999999999999965321  111111111           0


Q ss_pred             ccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430          910 NLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD  957 (973)
Q Consensus       910 ~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~  957 (973)
                      ....           .+..+++++.+++.+||+.||++|||++|+++|
T Consensus       230 ~~~~-----------~~~~~s~~l~~li~~~L~~dp~~Rps~~ell~h  266 (269)
T d2java1         230 KFRR-----------IPYRYSDELNEIITRMLNLKDYHRPSVEEILEN  266 (269)
T ss_dssp             CCCC-----------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             CCCC-----------CCcccCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence            0000           012345678999999999999999999999875


No 15 
>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.4e-46  Score=395.91  Aligned_cols=245  Identities=26%  Similarity=0.390  Sum_probs=196.9

Q ss_pred             CCCccccccCceEEEEEEe-CCCeEEEEEEEeccc--hhhHHHHHHHHHHHHhccCCceeEEEeeeec----CCeeEEEE
Q 048430          683 GESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQE--DRALKSFDTECEVMRRIRHRNLIKIVSSCSN----PGFKALIM  755 (973)
Q Consensus       683 ~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~~lv~  755 (973)
                      +..++||+|+||+||+|+. .+++.||+|++....  ....+.+.+|++++++++||||+++++++..    ....++||
T Consensus        12 ~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~ivm   91 (270)
T d1t4ha_          12 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT   91 (270)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEE
T ss_pred             EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEEE
Confidence            4456899999999999996 468899999987543  3445789999999999999999999999854    45679999


Q ss_pred             EecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCC--eEEccCCCCcEEeC-CCCcEEEeecccccccCC
Q 048430          756 QYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTP--IIHCDLKPNNVLLD-DDMVAHLGDFGIAKLLDG  832 (973)
Q Consensus       756 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~--ivH~dlk~~Nill~-~~~~~kl~Dfgla~~~~~  832 (973)
                      ||+++|+|.+++.... .+++.++..++.||++||+|||   +++  |+||||||+|||++ +++.+||+|||+|+....
T Consensus        92 E~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~gl~yLH---~~~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~~~  167 (270)
T d1t4ha_          92 ELMTSGTLKTYLKRFK-VMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA  167 (270)
T ss_dssp             ECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred             eCCCCCcHHHHHhccc-cccHHHHHHHHHHHHHHHHHHH---HCCCCEEeCCcChhhceeeCCCCCEEEeecCcceeccC
Confidence            9999999999998764 7999999999999999999999   666  99999999999996 578999999999986432


Q ss_pred             CCCcccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhcccccC
Q 048430          833 VDPVTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLL  912 (973)
Q Consensus       833 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~  912 (973)
                         ......+||+.|||||.+.+ .++.++|||||||++|||++|+.||.....    ..........+....       
T Consensus       168 ---~~~~~~~GT~~Y~aPE~~~~-~~~~~~DIwSlGvilyel~~g~~Pf~~~~~----~~~~~~~i~~~~~~~-------  232 (270)
T d1t4ha_         168 ---SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQN----AAQIYRRVTSGVKPA-------  232 (270)
T ss_dssp             ---TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSS----HHHHHHHHTTTCCCG-------
T ss_pred             ---CccCCcccCccccCHHHhCC-CCCCcCchhhHHHHHHHHHHCCCCCCCccc----HHHHHHHHHcCCCCc-------
Confidence               22334579999999998765 699999999999999999999999964321    112111111110000       


Q ss_pred             CCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430          913 SREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD  957 (973)
Q Consensus       913 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~  957 (973)
                                 ..+..+++++.+++.+||+.||++|||++|+++|
T Consensus       233 -----------~~~~~~~~~~~~li~~~l~~dp~~R~s~~ell~H  266 (270)
T d1t4ha_         233 -----------SFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH  266 (270)
T ss_dssp             -----------GGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             -----------ccCccCCHHHHHHHHHHccCCHhHCcCHHHHhCC
Confidence                       0112235568899999999999999999999875


No 16 
>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=5.1e-47  Score=413.56  Aligned_cols=271  Identities=22%  Similarity=0.294  Sum_probs=206.4

Q ss_pred             hcCCCCCccccccCceEEEEEEe-CCCeEEEEEEEeccc-hhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEEEE
Q 048430          679 TNGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQE-DRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALIMQ  756 (973)
Q Consensus       679 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  756 (973)
                      .++|...+.||+|+||+||+|+. .+|+.||+|+++... ....+.+.+|+.++++++|||||+++++|.+++..++|||
T Consensus         5 ~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iVmE   84 (322)
T d1s9ja_           5 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME   84 (322)
T ss_dssp             GGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             ccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEE
Confidence            46788999999999999999995 579999999997653 3345788999999999999999999999999999999999


Q ss_pred             ecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCCCCc
Q 048430          757 YMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGVDPV  836 (973)
Q Consensus       757 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~  836 (973)
                      ||++|+|.+++...+ .+++..+..++.|++.||.|||+  ..+|+||||||+|||++.++.+||+|||+|+....   .
T Consensus        85 y~~gg~L~~~l~~~~-~l~~~~~~~~~~qil~aL~yLH~--~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~---~  158 (322)
T d1s9ja_          85 HMDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID---S  158 (322)
T ss_dssp             CCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHH--HHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHH---H
T ss_pred             cCCCCcHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHH--hCCEEccccCHHHeeECCCCCEEEeeCCCccccCC---C
Confidence            999999999998765 69999999999999999999993  24899999999999999999999999999986532   1


Q ss_pred             ccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhh------cccc
Q 048430          837 TQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEV------VDAN  910 (973)
Q Consensus       837 ~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~------~d~~  910 (973)
                      .....+||+.|+|||.+.+..++.++||||+||++|||++|+.||......+..  ........+.....      ....
T Consensus       159 ~~~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~  236 (322)
T d1s9ja_         159 MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELE--LMFGCQVEGDAAETPPRPRTPGRP  236 (322)
T ss_dssp             TC---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHH--HHC---------------------
T ss_pred             ccccccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH--HHHHHHhcCCcccCCccccccccc
Confidence            223458999999999999999999999999999999999999999653221110  00000000000000      0000


Q ss_pred             -----cCCCCchhhhhhHH----------hHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430          911 -----LLSREDEEDADDFA----------TKKTCISYIMSLALKCSAEIPEERINVKDALAD  957 (973)
Q Consensus       911 -----l~~~~~~~~~~~~~----------~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~  957 (973)
                           ..............          ....++.++.+++.+||+.||++|||++|+++|
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~H  298 (322)
T d1s9ja_         237 LSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH  298 (322)
T ss_dssp             ---------CCCCHHHHHHHHHTSCCCCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             ccccccccccchhHHHHHhhhhccCCccCccccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence                 00000000000000          001135678999999999999999999999997


No 17 
>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.6e-46  Score=410.18  Aligned_cols=256  Identities=25%  Similarity=0.382  Sum_probs=207.1

Q ss_pred             hcCCCCCccccccCceEEEEEEeCC------CeEEEEEEEeccc-hhhHHHHHHHHHHHHhc-cCCceeEEEeeeecCCe
Q 048430          679 TNGFGESNLLGSGSFDNVYKATLAN------GVSVAVKVFNLQE-DRALKSFDTECEVMRRI-RHRNLIKIVSSCSNPGF  750 (973)
Q Consensus       679 ~~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~  750 (973)
                      .++|...++||+|+||+||+|+...      ...||||.+.... ......+.+|+.++.++ +|||||++++++.+.+.
T Consensus        36 ~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~  115 (325)
T d1rjba_          36 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGP  115 (325)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             HHHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCCe
Confidence            3578888999999999999998532      2469999886543 33456899999999998 89999999999999999


Q ss_pred             eEEEEEecCCCCHHHHhhhCC----------------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCC
Q 048430          751 KALIMQYMPQGSLEKWLYSHN----------------------YSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKP  808 (973)
Q Consensus       751 ~~lv~e~~~~gsL~~~l~~~~----------------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~  808 (973)
                      .++|||||++|+|.++++...                      ..+++..++.++.||++||+|||   +++||||||||
T Consensus       116 ~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH---~~~IiHRDlKp  192 (325)
T d1rjba_         116 IYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE---FKSCVHRDLAA  192 (325)
T ss_dssp             CEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHH---HTTEEETTCSG
T ss_pred             EEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCch
Confidence            999999999999999997653                      24889999999999999999999   78999999999


Q ss_pred             CcEEeCCCCcEEEeecccccccCCCCCc-ccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCcccc
Q 048430          809 NNVLLDDDMVAHLGDFGIAKLLDGVDPV-TQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFT-RRKPTNEMFT  886 (973)
Q Consensus       809 ~Nill~~~~~~kl~Dfgla~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~ellt-g~~p~~~~~~  886 (973)
                      +||+++.++.+||+|||+|+........ ......||+.|||||.+.++.++.++|||||||++|||+| |+.||.+...
T Consensus       193 ~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~  272 (325)
T d1rjba_         193 RNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPV  272 (325)
T ss_dssp             GGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC
T ss_pred             hccccccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCCCH
Confidence            9999999999999999999876543332 2334568999999999999999999999999999999998 8999875332


Q ss_pred             CcccHHHHHHhhCCcchhhhcccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHH
Q 048430          887 GEMSLKQWVAESLPGAVTEVVDANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKK  960 (973)
Q Consensus       887 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~  960 (973)
                      . ..+...+....                      +...+..+++++.+++.+||+.||++||||+||+++|..
T Consensus       273 ~-~~~~~~~~~~~----------------------~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~  323 (325)
T d1rjba_         273 D-ANFYKLIQNGF----------------------KMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGC  323 (325)
T ss_dssp             S-HHHHHHHHTTC----------------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             H-HHHHHHHhcCC----------------------CCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHhC
Confidence            2 12222222110                      001123456779999999999999999999999999863


No 18 
>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.5e-46  Score=398.84  Aligned_cols=259  Identities=24%  Similarity=0.358  Sum_probs=202.2

Q ss_pred             hcCCCCCccccccCceEEEEEEeC----CCeEEEEEEEeccc-hhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEE
Q 048430          679 TNGFGESNLLGSGSFDNVYKATLA----NGVSVAVKVFNLQE-DRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKAL  753 (973)
Q Consensus       679 ~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l  753 (973)
                      .++|...+.||+|+||.||+|+..    .+..||||.++... +...+.|.+|+.++++++||||+++++++. .+..++
T Consensus         6 ~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~i   84 (273)
T d1mp8a_           6 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI   84 (273)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEE
T ss_pred             HHHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCeEEE
Confidence            356788899999999999999854    24578899886443 344678999999999999999999999996 467899


Q ss_pred             EEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCC
Q 048430          754 IMQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGV  833 (973)
Q Consensus       754 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~  833 (973)
                      ||||+++|++.+++......+++..+..++.||++||+|||   +++|+||||||+||+++.++.+||+|||+|+.....
T Consensus        85 v~E~~~~g~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH---~~~iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~~~~  161 (273)
T d1mp8a_          85 IMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS  161 (273)
T ss_dssp             EEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECC----------
T ss_pred             EEEeccCCcHHhhhhccCCCCCHHHHHHHHHHHHHHhhhhc---ccCeeccccchhheeecCCCcEEEccchhheeccCC
Confidence            99999999999998887778999999999999999999999   899999999999999999999999999999876544


Q ss_pred             CCcccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCccccCcccHHHHHHhhCCcchhhhcccccC
Q 048430          834 DPVTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFT-RRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLL  912 (973)
Q Consensus       834 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~  912 (973)
                      .........||+.|+|||.+....++.++|||||||++|||++ |+.||......  .+...+.....            
T Consensus       162 ~~~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~--~~~~~i~~~~~------------  227 (273)
T d1mp8a_         162 TYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN--DVIGRIENGER------------  227 (273)
T ss_dssp             ---------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--GHHHHHHTTCC------------
T ss_pred             cceeccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCHH--HHHHHHHcCCC------------
Confidence            4444455678999999999999999999999999999999998 88888654322  22222211100            


Q ss_pred             CCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHHHH
Q 048430          913 SREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIKKIL  965 (973)
Q Consensus       913 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~~~~  965 (973)
                                .+.+..+++++.+++.+||+.||++|||++|++++|+.+.+.-
T Consensus       228 ----------~~~~~~~~~~~~~li~~cl~~dp~~Rps~~ei~~~L~~i~~~~  270 (273)
T d1mp8a_         228 ----------LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE  270 (273)
T ss_dssp             ----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             ----------CCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHHh
Confidence                      0112245677999999999999999999999999999987653


No 19 
>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=100.00  E-value=1.6e-46  Score=405.17  Aligned_cols=252  Identities=24%  Similarity=0.322  Sum_probs=191.7

Q ss_pred             hcCCCCCccccccCceEEEEEEe-CCCeEEEEEEEeccc-hhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEEEE
Q 048430          679 TNGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQE-DRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALIMQ  756 (973)
Q Consensus       679 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  756 (973)
                      .+.|...+.||+|+||+||+|+. .+++.||||++.... ....+.+.+|+.++++++||||+++++++.+++..|+|||
T Consensus         8 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lvmE   87 (307)
T d1a06a_           8 RDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQ   87 (307)
T ss_dssp             GGTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             ccceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence            46688899999999999999996 478999999987553 2334678899999999999999999999999999999999


Q ss_pred             ecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeC---CCCcEEEeecccccccCCC
Q 048430          757 YMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLD---DDMVAHLGDFGIAKLLDGV  833 (973)
Q Consensus       757 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~---~~~~~kl~Dfgla~~~~~~  833 (973)
                      ||++|+|.+++...+ .+++.++..++.||+.||+|||   +++||||||||+||++.   +++.+||+|||+|+.....
T Consensus        88 ~~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~al~ylH---~~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~~  163 (307)
T d1a06a_          88 LVSGGELFDRIVEKG-FYTERDASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG  163 (307)
T ss_dssp             CCCSCBHHHHHHTCS-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSTTCCEEECCC---------
T ss_pred             ccCCCcHHHhhhccc-CCCHHHHHHHHHHHHHHHHhhh---hceeeeEEecccceeecccCCCceEEEeccceeEEccCC
Confidence            999999999998754 7999999999999999999999   79999999999999994   5789999999999866432


Q ss_pred             CCcccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhcccccCC
Q 048430          834 DPVTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLLS  913 (973)
Q Consensus       834 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~  913 (973)
                      .  .....+||+.|||||.+.+..++.++||||+||++|||++|+.||.+....  .....+..   +.        ...
T Consensus       164 ~--~~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~--~~~~~i~~---~~--------~~~  228 (307)
T d1a06a_         164 S--VLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDA--KLFEQILK---AE--------YEF  228 (307)
T ss_dssp             -----------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHHHHT---TC--------CCC
T ss_pred             C--eeeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHH--HHHHHHhc---cC--------CCC
Confidence            2  233457999999999999999999999999999999999999999653211  11111111   00        000


Q ss_pred             CCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430          914 REDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD  957 (973)
Q Consensus       914 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~  957 (973)
                      .        ......+++++.+++.+||+.||++|||++|+++|
T Consensus       229 ~--------~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~h  264 (307)
T d1a06a_         229 D--------SPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQH  264 (307)
T ss_dssp             C--------TTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred             C--------CccccCCCHHHHHHHHHHccCCHhHCcCHHHHhcC
Confidence            0        00112345678999999999999999999999986


No 20 
>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}
Probab=100.00  E-value=1e-45  Score=405.85  Aligned_cols=253  Identities=21%  Similarity=0.288  Sum_probs=210.6

Q ss_pred             hcCCCCCccccccCceEEEEEEe-CCCeEEEEEEEeccchhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEEEEe
Q 048430          679 TNGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQEDRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALIMQY  757 (973)
Q Consensus       679 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  757 (973)
                      .++|...+.||+|+||.||+|+. .+|+.||||++........+.+.+|+.++++++||||+++++++.+++..++||||
T Consensus        25 l~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~  104 (350)
T d1koaa2          25 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF  104 (350)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             ccCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEc
Confidence            45799999999999999999985 57999999999776666678899999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCC--CCcEEEeecccccccCCCCC
Q 048430          758 MPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDD--DMVAHLGDFGIAKLLDGVDP  835 (973)
Q Consensus       758 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~--~~~~kl~Dfgla~~~~~~~~  835 (973)
                      |++|+|.+++......+++.++..++.||+.||+|||   +++||||||||+|||++.  ++.+||+|||+|+.....  
T Consensus       105 ~~gg~L~~~l~~~~~~l~e~~~~~i~~qi~~aL~ylH---~~~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~--  179 (350)
T d1koaa2         105 MSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK--  179 (350)
T ss_dssp             CCSCBHHHHHTCTTSCBCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSTTSCCEEECCCTTCEECCTT--
T ss_pred             CCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---hcCCeeeeechhHeeeccCCCCeEEEeecchheecccc--
Confidence            9999999999766667999999999999999999999   899999999999999964  578999999999876532  


Q ss_pred             cccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhcccccCCCC
Q 048430          836 VTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLLSRE  915 (973)
Q Consensus       836 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~  915 (973)
                      .......||+.|||||.+.+..++.++||||+||++|||++|+.||.+...     ........        ......  
T Consensus       180 ~~~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~-----~~~~~~i~--------~~~~~~--  244 (350)
T d1koaa2         180 QSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEND-----DETLRNVK--------SCDWNM--  244 (350)
T ss_dssp             SCEEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHHHH--------HTCCCS--
T ss_pred             cccceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCH-----HHHHHHHH--------hCCCCC--
Confidence            233446799999999999999999999999999999999999999965321     11111110        000000  


Q ss_pred             chhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430          916 DEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD  957 (973)
Q Consensus       916 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~  957 (973)
                      ..      .....+++++.+++.+||+.||++|||++|+++|
T Consensus       245 ~~------~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~h  280 (350)
T d1koaa2         245 DD------SAFSGISEDGKDFIRKLLLADPNTRMTIHQALEH  280 (350)
T ss_dssp             CC------GGGGGCCHHHHHHHHHHCCSSGGGSCCHHHHHHS
T ss_pred             Cc------ccccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            00      0111245678999999999999999999999986


No 21 
>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=8.8e-47  Score=402.91  Aligned_cols=249  Identities=24%  Similarity=0.317  Sum_probs=204.7

Q ss_pred             cCCCCCccccccCceEEEEEEe-CCCeEEEEEEEeccc---hhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEEE
Q 048430          680 NGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQE---DRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALIM  755 (973)
Q Consensus       680 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~  755 (973)
                      ++|...+.||+|+||+||+|+. .+|+.||||+++...   ....+.+.+|++++++++||||+++++++.+++..|+||
T Consensus         8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivm   87 (288)
T d1uu3a_           8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL   87 (288)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEEE
T ss_pred             CCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEEEE
Confidence            4688899999999999999996 579999999987542   334577999999999999999999999999999999999


Q ss_pred             EecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCCCC
Q 048430          756 QYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGVDP  835 (973)
Q Consensus       756 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~  835 (973)
                      ||+++|+|.+++...+ .+++..+..++.|++.||+|||   +++||||||||+|||+++++.+||+|||+|+.......
T Consensus        88 Ey~~gg~L~~~~~~~~-~l~e~~~~~~~~qi~~al~ylH---~~~iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~~  163 (288)
T d1uu3a_          88 SYAKNGELLKYIRKIG-SFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK  163 (288)
T ss_dssp             CCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECC----
T ss_pred             EccCCCCHHHhhhccC-CCCHHHHHHHHHHHHHHHHhhc---cccEEcCcCCccccccCCCceEEecccccceecccCCc
Confidence            9999999999988765 7999999999999999999999   89999999999999999999999999999987653322


Q ss_pred             -cccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhcccccCCC
Q 048430          836 -VTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLLSR  914 (973)
Q Consensus       836 -~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~  914 (973)
                       ......+||+.|+|||.+.+..++.++||||+||++|||++|+.||.....     .........+.        .   
T Consensus       164 ~~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~-----~~~~~~i~~~~--------~---  227 (288)
T d1uu3a_         164 QARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE-----YLIFQKIIKLE--------Y---  227 (288)
T ss_dssp             ------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHHHHTTC--------C---
T ss_pred             ccccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcCH-----HHHHHHHHcCC--------C---
Confidence             233445799999999999999999999999999999999999999965211     11111111110        0   


Q ss_pred             CchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430          915 EDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD  957 (973)
Q Consensus       915 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~  957 (973)
                               ..+..+++++.+++.+||+.||++|||++|++++
T Consensus       228 ---------~~p~~~s~~~~~li~~~L~~dP~~R~t~~e~~~~  261 (288)
T d1uu3a_         228 ---------DFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGY  261 (288)
T ss_dssp             ---------CCCTTCCHHHHHHHHTTSCSSGGGSTTSGGGTCH
T ss_pred             ---------CCCccCCHHHHHHHHHHccCCHhHCcCHHHHcCC
Confidence                     0011245668899999999999999999998665


No 22 
>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=3.3e-46  Score=397.83  Aligned_cols=256  Identities=25%  Similarity=0.413  Sum_probs=202.6

Q ss_pred             hcCCCCCccccccCceEEEEEEeCCCeEEEEEEEeccchhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEEEEec
Q 048430          679 TNGFGESNLLGSGSFDNVYKATLANGVSVAVKVFNLQEDRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALIMQYM  758 (973)
Q Consensus       679 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~  758 (973)
                      .++|+..+.||+|+||.||+|+.++++.||||+++... ...+.|.+|+.++++++|||||+++++|.+ +..++||||+
T Consensus        16 ~~~~~i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~~-~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~-~~~~lv~Ey~   93 (285)
T d1fmka3          16 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYM   93 (285)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCC
T ss_pred             HHHEEEeeEEeeCCCeEEEEEEECCCCEEEEEEECccc-CCHHHHHHHHHHHHhcccCCEeEEEEEEec-CCeEEEEEec
Confidence            35788899999999999999999888899999986543 334789999999999999999999999865 5678999999


Q ss_pred             CCCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCCCCcc
Q 048430          759 PQGSLEKWLYSHN-YSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGVDPVT  837 (973)
Q Consensus       759 ~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~  837 (973)
                      ++|+|..++.... ..+++.++..++.||+.||+|||   +.+|+||||||+|||++.++.+||+|||+|+.........
T Consensus        94 ~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH---~~~ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~~~~~  170 (285)
T d1fmka3          94 SKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA  170 (285)
T ss_dssp             TTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCCTTC---------
T ss_pred             CCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHh---hhheecccccceEEEECCCCcEEEcccchhhhccCCCcee
Confidence            9999999887543 46999999999999999999999   7899999999999999999999999999998765444444


Q ss_pred             cccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhcccccCCCCch
Q 048430          838 QTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLLSREDE  917 (973)
Q Consensus       838 ~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~  917 (973)
                      .....||+.|+|||++..+.++.++|||||||++|||++|+.|+...... .....++.....                 
T Consensus       171 ~~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~-~~~~~~i~~~~~-----------------  232 (285)
T d1fmka3         171 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN-REVLDQVERGYR-----------------  232 (285)
T ss_dssp             -----CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH-HHHHHHHHTTCC-----------------
T ss_pred             eccccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCH-HHHHHHHHhcCC-----------------
Confidence            45567999999999999999999999999999999999987775432211 111121111100                 


Q ss_pred             hhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHH
Q 048430          918 EDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIK  962 (973)
Q Consensus       918 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~  962 (973)
                           .+.+..+++++.+++.+||+.||++||+|++|++.|+.+.
T Consensus       233 -----~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~~~  272 (285)
T d1fmka3         233 -----MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF  272 (285)
T ss_dssp             -----CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTT
T ss_pred             -----CCCCcccCHHHHHHHHHHcccCHhHCcCHHHHHHHHhhhh
Confidence                 0111235667899999999999999999999998887643


No 23 
>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=100.00  E-value=6.3e-46  Score=400.50  Aligned_cols=245  Identities=25%  Similarity=0.345  Sum_probs=201.4

Q ss_pred             CCCCCccccccCceEEEEEEe-CCCeEEEEEEEeccc---hhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEEEE
Q 048430          681 GFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQE---DRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALIMQ  756 (973)
Q Consensus       681 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  756 (973)
                      .|...+.||+|+||+||+|+. .+++.||||+++...   ....+.+.+|++++++++|||||++++++.+++..++|||
T Consensus        16 ~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv~E   95 (309)
T d1u5ra_          16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME   95 (309)
T ss_dssp             HEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             hcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEEEE
Confidence            488889999999999999985 578999999987543   3345679999999999999999999999999999999999


Q ss_pred             ecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCCCCc
Q 048430          757 YMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGVDPV  836 (973)
Q Consensus       757 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~  836 (973)
                      ||++|++..++.... .+++.++..++.||+.||.|||   +++||||||||+|||++.++.+||+|||+|+....    
T Consensus        96 ~~~~g~l~~~~~~~~-~l~e~~~~~i~~qi~~aL~yLH---~~~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~----  167 (309)
T d1u5ra_          96 YCLGSASDLLEVHKK-PLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP----  167 (309)
T ss_dssp             CCSEEHHHHHHHHTS-CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS----
T ss_pred             ecCCCchHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHH---hCCEeccCCCcceEEECCCCCEEEeecccccccCC----
Confidence            999999987766554 7999999999999999999999   79999999999999999999999999999986532    


Q ss_pred             ccccccccccccCccCCC---CCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhcccccCC
Q 048430          837 TQTMTLATIGYMAPEYGS---EGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLLS  913 (973)
Q Consensus       837 ~~~~~~~~~~y~aPE~~~---~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~  913 (973)
                       .....||+.|||||.+.   .+.++.++|||||||++|||++|+.||.....    ...+.... ...     .+..  
T Consensus       168 -~~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~----~~~~~~i~-~~~-----~~~~--  234 (309)
T d1u5ra_         168 -ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA----MSALYHIA-QNE-----SPAL--  234 (309)
T ss_dssp             -BCCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH----HHHHHHHH-HSC-----CCCC--
T ss_pred             -CCccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCH----HHHHHHHH-hCC-----CCCC--
Confidence             23457999999999764   35689999999999999999999999865321    11111100 000     0000  


Q ss_pred             CCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430          914 REDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD  957 (973)
Q Consensus       914 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~  957 (973)
                                 .+..+++++.+++.+||+.||++|||++|+++|
T Consensus       235 -----------~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~H  267 (309)
T d1u5ra_         235 -----------QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH  267 (309)
T ss_dssp             -----------SCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred             -----------CCCCCCHHHHHHHHHHCcCChhHCcCHHHHHhC
Confidence                       011245678999999999999999999999874


No 24 
>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}
Probab=100.00  E-value=1.5e-45  Score=404.71  Aligned_cols=253  Identities=21%  Similarity=0.277  Sum_probs=210.9

Q ss_pred             hcCCCCCccccccCceEEEEEEe-CCCeEEEEEEEeccchhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEEEEe
Q 048430          679 TNGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQEDRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALIMQY  757 (973)
Q Consensus       679 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  757 (973)
                      .++|...+.||+|+||.||+|+. .+|+.||||+++.......+.+.+|++++++++||||+++++++.+++..++||||
T Consensus        28 ~d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE~  107 (352)
T d1koba_          28 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF  107 (352)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEc
Confidence            35688999999999999999995 57999999999876655567889999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeC--CCCcEEEeecccccccCCCCC
Q 048430          758 MPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLD--DDMVAHLGDFGIAKLLDGVDP  835 (973)
Q Consensus       758 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~--~~~~~kl~Dfgla~~~~~~~~  835 (973)
                      |++|+|.+++......+++.+++.|+.||+.||+|||   +++||||||||+|||++  .++.+||+|||+|+.....  
T Consensus       108 ~~gg~L~~~~~~~~~~l~e~~~~~i~~qi~~aL~ylH---~~~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~--  182 (352)
T d1koba_         108 LSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMH---EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPD--  182 (352)
T ss_dssp             CCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTT--
T ss_pred             CCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecccccccccccccCCCeEEEeecccceecCCC--
Confidence            9999999998877767999999999999999999999   79999999999999997  6789999999999887542  


Q ss_pred             cccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhcccccCCCC
Q 048430          836 VTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLLSRE  915 (973)
Q Consensus       836 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~  915 (973)
                      .......||+.|+|||.+.+..++.++||||+||++|||++|+.||.+....  .....+......         ...  
T Consensus       183 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~--~~~~~i~~~~~~---------~~~--  249 (352)
T d1koba_         183 EIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDL--ETLQNVKRCDWE---------FDE--  249 (352)
T ss_dssp             SCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH--HHHHHHHHCCCC---------CCS--
T ss_pred             CceeeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHhCCCC---------CCc--
Confidence            2334457999999999999999999999999999999999999999653211  111111110000         000  


Q ss_pred             chhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430          916 DEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD  957 (973)
Q Consensus       916 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~  957 (973)
                              .....+++++.+++.+||+.||++|||++|+++|
T Consensus       250 --------~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~H  283 (352)
T d1koba_         250 --------DAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH  283 (352)
T ss_dssp             --------STTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred             --------ccccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence                    0011245678999999999999999999999986


No 25 
>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.5e-45  Score=401.22  Aligned_cols=260  Identities=24%  Similarity=0.387  Sum_probs=208.2

Q ss_pred             cCCCCCccccccCceEEEEEEeC-CCe----EEEEEEEeccc-hhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEE
Q 048430          680 NGFGESNLLGSGSFDNVYKATLA-NGV----SVAVKVFNLQE-DRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKAL  753 (973)
Q Consensus       680 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l  753 (973)
                      .+|+..++||+|+||+||+|+.. +|+    +||+|.++... ....+.|.+|++++++++|||||+++|+|.++ ..++
T Consensus         9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~-~~~~   87 (317)
T d1xkka_           9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL   87 (317)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESS-SEEE
T ss_pred             HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC-CeeE
Confidence            46888999999999999999854 443    68888876443 34467899999999999999999999999865 5678


Q ss_pred             EEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCC
Q 048430          754 IMQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGV  833 (973)
Q Consensus       754 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~  833 (973)
                      |+||+.+|+|.+++......+++..+..++.|||+||+|||   +++||||||||+||+++.++.+||+|||+|+.....
T Consensus        88 v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~yLH---~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~  164 (317)
T d1xkka_          88 ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE  164 (317)
T ss_dssp             EEECCTTCBHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCCSHHHHTTTT
T ss_pred             EEEeccCCcccccccccccCCCHHHHHHHHHHHHHHHHHHH---HcCcccCcchhhcceeCCCCCeEeeccccceecccc
Confidence            89999999999999988778999999999999999999999   789999999999999999999999999999876543


Q ss_pred             CCcc-cccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCccccCcccHHHHHHhhCCcchhhhccccc
Q 048430          834 DPVT-QTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFT-RRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANL  911 (973)
Q Consensus       834 ~~~~-~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l  911 (973)
                      .... .....||+.|+|||.+.++.++.++|||||||++|||+| |+.||+.....  .+...+....            
T Consensus       165 ~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~--~~~~~i~~~~------------  230 (317)
T d1xkka_         165 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS--EISSILEKGE------------  230 (317)
T ss_dssp             CC--------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGG--GHHHHHHHTC------------
T ss_pred             cccccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHH--HHHHHHHcCC------------
Confidence            3322 233468999999999999999999999999999999999 78888653322  2222222110            


Q ss_pred             CCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHHHHHh
Q 048430          912 LSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIKKILTQ  967 (973)
Q Consensus       912 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~~~~~~  967 (973)
                                +...+..+++++.+++.+||+.||++|||++|++++|+.+.+...+
T Consensus       231 ----------~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~eil~~l~~~~~~~~~  276 (317)
T d1xkka_         231 ----------RLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQR  276 (317)
T ss_dssp             ----------CCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSHHH
T ss_pred             ----------CCCCCcccCHHHHHHHHHhCCCChhhCcCHHHHHHHHHHHHhChHh
Confidence                      0011234567799999999999999999999999999998765443


No 26 
>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=6.2e-45  Score=391.94  Aligned_cols=252  Identities=22%  Similarity=0.317  Sum_probs=207.7

Q ss_pred             hcCCCCCccccccCceEEEEEEe-CCCeEEEEEEEeccc------hhhHHHHHHHHHHHHhccCCceeEEEeeeecCCee
Q 048430          679 TNGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQE------DRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFK  751 (973)
Q Consensus       679 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~------~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~  751 (973)
                      .++|...+.||+|+||+||+|+. .+|+.||||+++...      ....+.+.+|+.++++++||||+++++++.+++..
T Consensus         9 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~   88 (293)
T d1jksa_           9 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV   88 (293)
T ss_dssp             GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             ccCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEE
Confidence            35788999999999999999996 579999999986432      12357899999999999999999999999999999


Q ss_pred             EEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCC----cEEEeecccc
Q 048430          752 ALIMQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDM----VAHLGDFGIA  827 (973)
Q Consensus       752 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~----~~kl~Dfgla  827 (973)
                      ++|||||++|+|.+++...+ .+++.+++.++.|++.||+|||   +.+||||||||+||+++.++    .+|++|||+|
T Consensus        89 ~iv~E~~~gg~L~~~i~~~~-~l~~~~~~~~~~qi~~al~yLH---~~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a  164 (293)
T d1jksa_          89 ILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA  164 (293)
T ss_dssp             EEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCSSSSSCCEEECCCTTC
T ss_pred             EEEEEcCCCccccchhcccc-ccchhHHHHHHHHHHHHHHhhh---hcceeecccccceEEEecCCCcccceEecchhhh
Confidence            99999999999999998765 7999999999999999999999   89999999999999998876    4999999999


Q ss_pred             cccCCCCCcccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhc
Q 048430          828 KLLDGVDPVTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVV  907 (973)
Q Consensus       828 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  907 (973)
                      +......  ......||+.|+|||.+.+..++.++||||+||++|||++|+.||.+....     +.........     
T Consensus       165 ~~~~~~~--~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~-----~~~~~i~~~~-----  232 (293)
T d1jksa_         165 HKIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ-----ETLANVSAVN-----  232 (293)
T ss_dssp             EECTTSC--BCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-----HHHHHHHTTC-----
T ss_pred             hhcCCCc--cccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCCHH-----HHHHHHHhcC-----
Confidence            8764322  234457899999999999999999999999999999999999999653211     1111110000     


Q ss_pred             ccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430          908 DANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD  957 (973)
Q Consensus       908 d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~  957 (973)
                         .  ..      ....+..++.++.+++.+||+.||++|||++|+++|
T Consensus       233 ---~--~~------~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~h  271 (293)
T d1jksa_         233 ---Y--EF------EDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH  271 (293)
T ss_dssp             ---C--CC------CHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             ---C--CC------CchhcCCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence               0  00      011122356778999999999999999999999976


No 27 
>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=100.00  E-value=1.2e-45  Score=399.29  Aligned_cols=262  Identities=24%  Similarity=0.408  Sum_probs=212.4

Q ss_pred             HHHHHhcCCCCCccccccCceEEEEEEeC------CCeEEEEEEEeccch-hhHHHHHHHHHHHHhccCCceeEEEeeee
Q 048430          674 ELQQATNGFGESNLLGSGSFDNVYKATLA------NGVSVAVKVFNLQED-RALKSFDTECEVMRRIRHRNLIKIVSSCS  746 (973)
Q Consensus       674 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~  746 (973)
                      +++...++|...+.||+|+||+||+|+..      +++.||||+++.... ...+.|.+|++++++++||||++++++|.
T Consensus         7 ~~e~p~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~   86 (301)
T d1lufa_           7 SLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCA   86 (301)
T ss_dssp             HTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC
T ss_pred             hccCCHHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceeeec
Confidence            44445678999999999999999999853      467899999875533 34578999999999999999999999999


Q ss_pred             cCCeeEEEEEecCCCCHHHHhhhCC-----------------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEE
Q 048430          747 NPGFKALIMQYMPQGSLEKWLYSHN-----------------------YSLTIRQRLDIMIDVASALEYLHHGYSTPIIH  803 (973)
Q Consensus       747 ~~~~~~lv~e~~~~gsL~~~l~~~~-----------------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH  803 (973)
                      ..+..++||||+++|+|.++++...                       ..+++..+..|+.|++.||+|||   +++|||
T Consensus        87 ~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH---~~~ivH  163 (301)
T d1lufa_          87 VGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLS---ERKFVH  163 (301)
T ss_dssp             SSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCC
T ss_pred             cCCceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcc---cCCeEe
Confidence            9999999999999999999997532                       24889999999999999999999   899999


Q ss_pred             ccCCCCcEEeCCCCcEEEeecccccccCCCCCc-ccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCC-CC
Q 048430          804 CDLKPNNVLLDDDMVAHLGDFGIAKLLDGVDPV-TQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRK-PT  881 (973)
Q Consensus       804 ~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~-p~  881 (973)
                      |||||+||+++.++.+||+|||+|+........ ......+++.|+|||.+.+..++.++|||||||++|||++|.. ||
T Consensus       164 rDlKp~NILld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~  243 (301)
T d1lufa_         164 RDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPY  243 (301)
T ss_dssp             SCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTT
T ss_pred             eEEcccceEECCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCCC
Confidence            999999999999999999999999866432222 2334568899999999999999999999999999999999964 56


Q ss_pred             CccccCcccHHHHHHhhCCcchhhhcccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHH
Q 048430          882 NEMFTGEMSLKQWVAESLPGAVTEVVDANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKI  961 (973)
Q Consensus       882 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~  961 (973)
                      ......  .+...+..   +.        .           ...+..+++++.+++.+||+.+|++||||.||++.|++|
T Consensus       244 ~~~~~~--e~~~~v~~---~~--------~-----------~~~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~~L~~i  299 (301)
T d1lufa_         244 YGMAHE--EVIYYVRD---GN--------I-----------LACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRM  299 (301)
T ss_dssp             TTSCHH--HHHHHHHT---TC--------C-----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHT
T ss_pred             CCCCHH--HHHHHHHc---CC--------C-----------CCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHh
Confidence            542211  11111111   10        0           011224566789999999999999999999999999987


Q ss_pred             H
Q 048430          962 K  962 (973)
Q Consensus       962 ~  962 (973)
                      .
T Consensus       300 ~  300 (301)
T d1lufa_         300 C  300 (301)
T ss_dssp             T
T ss_pred             c
Confidence            5


No 28 
>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=9.1e-46  Score=389.64  Aligned_cols=250  Identities=28%  Similarity=0.412  Sum_probs=198.3

Q ss_pred             cCCCCCccccccCceEEEEEEeCCCeEEEEEEEeccchhhHHHHHHHHHHHHhccCCceeEEEeeeec-CCeeEEEEEec
Q 048430          680 NGFGESNLLGSGSFDNVYKATLANGVSVAVKVFNLQEDRALKSFDTECEVMRRIRHRNLIKIVSSCSN-PGFKALIMQYM  758 (973)
Q Consensus       680 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~~~lv~e~~  758 (973)
                      ++|...+.||+|+||.||+|+.+ |+.||||+++.+  ...+.+.+|++++++++||||++++|+|.+ .+..++||||+
T Consensus         7 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~vAvK~i~~~--~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~ey~   83 (262)
T d1byga_           7 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM   83 (262)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCC--C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCC
T ss_pred             HHeEEeEEEecCCCeEEEEEEEC-CeEEEEEEECcH--HHHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEEEecc
Confidence            45667889999999999999985 889999998644  344789999999999999999999999855 56789999999


Q ss_pred             CCCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCCCCcc
Q 048430          759 PQGSLEKWLYSHN-YSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGVDPVT  837 (973)
Q Consensus       759 ~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~  837 (973)
                      ++|+|.+++.... ..+++..+++++.||+.||.|||   +.+|+||||||+||+++.++.+|++|||+++....    .
T Consensus        84 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH---~~~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~----~  156 (262)
T d1byga_          84 AKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS----T  156 (262)
T ss_dssp             TTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTSCEEECCCCC-----------
T ss_pred             CCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccc---cCceeccccchHhheecCCCCEeecccccceecCC----C
Confidence            9999999997643 35899999999999999999999   78999999999999999999999999999986542    2


Q ss_pred             cccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCccccCcccHHHHHHhhCCcchhhhcccccCCCCc
Q 048430          838 QTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFT-RRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLLSRED  916 (973)
Q Consensus       838 ~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~  916 (973)
                      .....+|..|+|||++.++.++.++|||||||++|||+| |+.||.....  ..+..++.....                
T Consensus       157 ~~~~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~--~~~~~~i~~~~~----------------  218 (262)
T d1byga_         157 QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL--KDVVPRVEKGYK----------------  218 (262)
T ss_dssp             -----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCG--GGHHHHHTTTCC----------------
T ss_pred             CccccccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCH--HHHHHHHHcCCC----------------
Confidence            233468899999999988999999999999999999998 6777654322  122222211000                


Q ss_pred             hhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHH
Q 048430          917 EEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIKK  963 (973)
Q Consensus       917 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~~  963 (973)
                            ...+..+++++.+++.+||+.||++||||.|++++|++++.
T Consensus       219 ------~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~l~~~L~~i~~  259 (262)
T d1byga_         219 ------MDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKT  259 (262)
T ss_dssp             ------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             ------CCCCccCCHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHh
Confidence                  01112345678999999999999999999999999998864


No 29 
>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=4.6e-45  Score=394.85  Aligned_cols=258  Identities=23%  Similarity=0.403  Sum_probs=208.7

Q ss_pred             CccccccCceEEEEEEeCC----CeEEEEEEEecc-chhhHHHHHHHHHHHHhccCCceeEEEeeeec-CCeeEEEEEec
Q 048430          685 SNLLGSGSFDNVYKATLAN----GVSVAVKVFNLQ-EDRALKSFDTECEVMRRIRHRNLIKIVSSCSN-PGFKALIMQYM  758 (973)
Q Consensus       685 ~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~~~lv~e~~  758 (973)
                      .++||+|+||+||+|++.+    ...||||+++.. .....++|.+|++++++++||||++++|++.+ ++..++|||||
T Consensus        32 ~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E~~  111 (311)
T d1r0pa_          32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM  111 (311)
T ss_dssp             EEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEECC
T ss_pred             ceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEEEEe
Confidence            4689999999999998643    236899998643 44556889999999999999999999999865 56889999999


Q ss_pred             CCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCCCCc--
Q 048430          759 PQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGVDPV--  836 (973)
Q Consensus       759 ~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~--  836 (973)
                      ++|+|.+++.......++..+..++.|+|+||.|+|   +.+|+||||||+|||+++++.+||+|||+++........  
T Consensus       112 ~~g~l~~~~~~~~~~~~~~~~~~i~~qia~gL~~lH---~~~iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~~~~~  188 (311)
T d1r0pa_         112 KHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSV  188 (311)
T ss_dssp             TTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTTCCCT
T ss_pred             ecCchhhhhccccccchHHHHHHHHHHHHHhhhhhc---ccCcccCCccHHhEeECCCCCEEEecccchhhccccccccc
Confidence            999999999987778889999999999999999999   799999999999999999999999999999876433222  


Q ss_pred             -ccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhcccccCCCC
Q 048430          837 -TQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLLSRE  915 (973)
Q Consensus       837 -~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~  915 (973)
                       ......||+.|+|||....+.++.++|||||||++|||+||+.||....... .+..++.....               
T Consensus       189 ~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~-~~~~~i~~g~~---------------  252 (311)
T d1r0pa_         189 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF-DITVYLLQGRR---------------  252 (311)
T ss_dssp             TCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC-------CHHHHHTTCC---------------
T ss_pred             eecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCHH-HHHHHHHcCCC---------------
Confidence             2233568999999999999999999999999999999999888876433221 11121111000               


Q ss_pred             chhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHHHHHhh
Q 048430          916 DEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIKKILTQA  968 (973)
Q Consensus       916 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~~~~~~~  968 (973)
                             ...+..+++++.+++.+||+.||++||+|.||+++|+++.+.+..+
T Consensus       253 -------~~~p~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~L~~i~~~~~~~  298 (311)
T d1r0pa_         253 -------LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGE  298 (311)
T ss_dssp             -------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCCSC
T ss_pred             -------CCCcccCcHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHhhhhh
Confidence                   0011234567899999999999999999999999999998765443


No 30 
>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=8.8e-45  Score=391.81  Aligned_cols=278  Identities=21%  Similarity=0.280  Sum_probs=201.3

Q ss_pred             cCCCCCccccccCceEEEEEEeCCCeEEEEEEEeccchhhHHHHHHHHHHHHhccCCceeEEEeeeecCC----eeEEEE
Q 048430          680 NGFGESNLLGSGSFDNVYKATLANGVSVAVKVFNLQEDRALKSFDTECEVMRRIRHRNLIKIVSSCSNPG----FKALIM  755 (973)
Q Consensus       680 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----~~~lv~  755 (973)
                      ++|...+.||+|+||.||+|+. +|+.||||+++..... ...+..|+..+.+++||||++++++|.+.+    ..++||
T Consensus         3 ~~~~l~~~iG~G~fg~Vy~~~~-~g~~vAvK~~~~~~~~-~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~lv~   80 (303)
T d1vjya_           3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREER-SWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS   80 (303)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEE-TTEEEEEEEECGGGHH-HHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred             cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccchh-HHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEEEE
Confidence            3566678999999999999997 4899999998644321 122334555556789999999999997543    678999


Q ss_pred             EecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhc-----CCCCeEEccCCCCcEEeCCCCcEEEeeccccccc
Q 048430          756 QYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHG-----YSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLL  830 (973)
Q Consensus       756 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~-----~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~  830 (973)
                      |||++|+|.++++..  .+++.++.+++.|+|.||+|+|..     ..++||||||||+|||++.++.+||+|||+++..
T Consensus        81 Ey~~~g~L~~~l~~~--~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DFGl~~~~  158 (303)
T d1vjya_          81 DYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH  158 (303)
T ss_dssp             ECCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEEE
T ss_pred             ecccCCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEEEecCccccc
Confidence            999999999999876  599999999999999999999942     1369999999999999999999999999999876


Q ss_pred             CCCCCc---ccccccccccccCccCCCCCC------CCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCc
Q 048430          831 DGVDPV---TQTMTLATIGYMAPEYGSEGI------VSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPG  901 (973)
Q Consensus       831 ~~~~~~---~~~~~~~~~~y~aPE~~~~~~------~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~  901 (973)
                      ......   ......||+.|+|||++....      ++.++|||||||++|||+||..||...............  ...
T Consensus       159 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~--~~~  236 (303)
T d1vjya_         159 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVP--SDP  236 (303)
T ss_dssp             ETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSC--SSC
T ss_pred             cCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhccc--ccc
Confidence            543322   223457999999999876542      678999999999999999999887543222111100000  000


Q ss_pred             chhhhcccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHHH
Q 048430          902 AVTEVVDANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIKKI  964 (973)
Q Consensus       902 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~~~  964 (973)
                      ......+....... ............+...+.+++.+||+.||++||||.||+++|+++.++
T Consensus       237 ~~~~~~~~~~~~~~-~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L~~i~~~  298 (303)
T d1vjya_         237 SVEEMRKVVCEQKL-RPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ  298 (303)
T ss_dssp             CHHHHHHHHTTSCC-CCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHhcccc-CCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHh
Confidence            00000000000000 001111122334667799999999999999999999999999988864


No 31 
>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=6.5e-45  Score=396.73  Aligned_cols=249  Identities=24%  Similarity=0.286  Sum_probs=208.6

Q ss_pred             hcCCCCCccccccCceEEEEEEe-CCCeEEEEEEEeccc---hhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEE
Q 048430          679 TNGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQE---DRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALI  754 (973)
Q Consensus       679 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv  754 (973)
                      .++|...+.||+|+||.||+|+. .+|+.||||+++...   ....+.+.+|+.++++++||||+++++++.+++..|+|
T Consensus         4 l~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~iv   83 (337)
T d1o6la_           4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV   83 (337)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hHhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeeccccccccc
Confidence            35788999999999999999995 579999999997542   33457789999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCCC
Q 048430          755 MQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGVD  834 (973)
Q Consensus       755 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~  834 (973)
                      ||||++|+|.+++...+ .+++..++.++.||+.||+|||   +++||||||||+|||++.+|.+||+|||+|+......
T Consensus        84 ~ey~~gg~L~~~~~~~~-~~~e~~~~~~~~qil~al~ylH---~~~iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~~~  159 (337)
T d1o6la_          84 MEYANGGELFFHLSRER-VFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG  159 (337)
T ss_dssp             EECCTTCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTT
T ss_pred             eeccCCCchhhhhhccc-CCcHHHHHHHHHHHhhhhhhhh---hcCccccccCHHHeEecCCCCEEEeecccccccccCC
Confidence            99999999999998765 7899999999999999999999   8999999999999999999999999999998654322


Q ss_pred             CcccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhcccccCCC
Q 048430          835 PVTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLLSR  914 (973)
Q Consensus       835 ~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~  914 (973)
                       ......+||+.|+|||.+.+..++.++||||+||++|||++|+.||.+...  ..+...+..   +.        .   
T Consensus       160 -~~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~--~~~~~~i~~---~~--------~---  222 (337)
T d1o6la_         160 -ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--ERLFELILM---EE--------I---  222 (337)
T ss_dssp             -CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHH---CC--------C---
T ss_pred             -cccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCH--HHHHHHHhc---CC--------C---
Confidence             233446799999999999999999999999999999999999999865321  111111111   00        0   


Q ss_pred             CchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCC-----HHHHHHH
Q 048430          915 EDEEDADDFATKKTCISYIMSLALKCSAEIPEERIN-----VKDALAD  957 (973)
Q Consensus       915 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt-----~~evl~~  957 (973)
                               ..+..+++++.+++.+||+.||++||+     ++|+++|
T Consensus       223 ---------~~p~~~s~~~~dli~~~L~~dP~~R~~~~~~~~~eil~H  261 (337)
T d1o6la_         223 ---------RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH  261 (337)
T ss_dssp             ---------CCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred             ---------CCCccCCHHHHHHHHhhccCCchhhcccccccHHHHHcC
Confidence                     011234567889999999999999995     8888876


No 32 
>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.6e-44  Score=390.74  Aligned_cols=264  Identities=23%  Similarity=0.363  Sum_probs=201.9

Q ss_pred             HHHHhcCCCCCccccccCceEEEEEEeC------CCeEEEEEEEeccc-hhhHHHHHHHHHHHHhc-cCCceeEEEeeee
Q 048430          675 LQQATNGFGESNLLGSGSFDNVYKATLA------NGVSVAVKVFNLQE-DRALKSFDTECEVMRRI-RHRNLIKIVSSCS  746 (973)
Q Consensus       675 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~  746 (973)
                      ++...++|...+.||+|+||.||+|+..      +++.||||+++... ....+.+.+|...+.++ +|+||+.+++++.
T Consensus         8 wei~~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~   87 (299)
T d1ywna1           8 WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACT   87 (299)
T ss_dssp             HBCCGGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             ccccHHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeeeeec
Confidence            3334467888999999999999999853      35789999987543 34456788888888877 6899999999876


Q ss_pred             c-CCeeEEEEEecCCCCHHHHhhhCC---------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCc
Q 048430          747 N-PGFKALIMQYMPQGSLEKWLYSHN---------------YSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNN  810 (973)
Q Consensus       747 ~-~~~~~lv~e~~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~N  810 (973)
                      + ....++|||||++|+|.++++...               ..+++.++..++.||++||+|||   +++||||||||+|
T Consensus        88 ~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH---~~~ivHrDlKp~N  164 (299)
T d1ywna1          88 KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARN  164 (299)
T ss_dssp             STTSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGG
T ss_pred             cCCCeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHH---hCCCcCCcCCccc
Confidence            5 456899999999999999997542               35899999999999999999999   7999999999999


Q ss_pred             EEeCCCCcEEEeecccccccCCCCCc-ccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCC-CCCCccccCc
Q 048430          811 VLLDDDMVAHLGDFGIAKLLDGVDPV-TQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRR-KPTNEMFTGE  888 (973)
Q Consensus       811 ill~~~~~~kl~Dfgla~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~-~p~~~~~~~~  888 (973)
                      ||++.++.+||+|||+|+........ ......||+.|+|||.+.+..++.++|||||||++|||+||. .||..... .
T Consensus       165 ILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~-~  243 (299)
T d1ywna1         165 ILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI-D  243 (299)
T ss_dssp             EEECGGGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCC-S
T ss_pred             eeECCCCcEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCCH-H
Confidence            99999999999999999876433322 334457999999999999999999999999999999999975 46654322 1


Q ss_pred             ccHHHHHHhhCCcchhhhcccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHHH
Q 048430          889 MSLKQWVAESLPGAVTEVVDANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIKKI  964 (973)
Q Consensus       889 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~~~  964 (973)
                      ..+...+.....                      ...+..+++++.+++.+||+.||++|||++|+++||+.+.+.
T Consensus       244 ~~~~~~~~~~~~----------------------~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~L~~ilq~  297 (299)
T d1ywna1         244 EEFCRRLKEGTR----------------------MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA  297 (299)
T ss_dssp             HHHHHHHHHTCC----------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhcCCC----------------------CCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence            222222221110                      001123456789999999999999999999999999998764


No 33 
>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.5e-45  Score=389.52  Aligned_cols=255  Identities=26%  Similarity=0.376  Sum_probs=197.7

Q ss_pred             cCCCCCccccccCceEEEEEEeC--C--CeEEEEEEEecc---chhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeE
Q 048430          680 NGFGESNLLGSGSFDNVYKATLA--N--GVSVAVKVFNLQ---EDRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKA  752 (973)
Q Consensus       680 ~~~~~~~~lg~G~~g~Vy~~~~~--~--~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~  752 (973)
                      ++|+..+.||+|+||.||+|+..  +  ...||||+++..   .+...+.|.+|+.++++++||||++++|+|.++ ..+
T Consensus         8 ~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~~-~~~   86 (273)
T d1u46a_           8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTP-PMK   86 (273)
T ss_dssp             GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS-SCE
T ss_pred             HHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeec-chh
Confidence            46788899999999999999853  2  347899988643   234467899999999999999999999999764 678


Q ss_pred             EEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCC
Q 048430          753 LIMQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDG  832 (973)
Q Consensus       753 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~  832 (973)
                      +||||+++|++.+++......+++..+..++.|||+||.|||   +++|+||||||+||+++.++.+||+|||+++....
T Consensus        87 lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH---~~~iiHrDikp~NIll~~~~~vkl~DfGl~~~~~~  163 (273)
T d1u46a_          87 MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ  163 (273)
T ss_dssp             EEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC
T ss_pred             eeeeeecCcchhhhhhcccCCCCHHHHHHHHHHHHHHHHHhh---hCCEeeeeecHHHhccccccceeeccchhhhhccc
Confidence            999999999999988876667999999999999999999999   79999999999999999999999999999998754


Q ss_pred             CCCc--ccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCccccCcccHHHHHHhhCCcchhhhccc
Q 048430          833 VDPV--TQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFT-RRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDA  909 (973)
Q Consensus       833 ~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  909 (973)
                      ....  ......+|..|+|||.+.+..++.++|||||||++|||+| |+.||.+....  ....++..   +        
T Consensus       164 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~--~~~~~i~~---~--------  230 (273)
T d1u46a_         164 NDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS--QILHKIDK---E--------  230 (273)
T ss_dssp             -CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHHHHHHT---S--------
T ss_pred             CCCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHH--HHHHHHHh---C--------
Confidence            3322  2234468889999999999999999999999999999998 89998643211  11111111   0        


Q ss_pred             ccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHH
Q 048430          910 NLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKI  961 (973)
Q Consensus       910 ~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~  961 (973)
                      ...          .+.+..++.++.+++.+||+.||++||||+||.+.|++.
T Consensus       231 ~~~----------~~~~~~~~~~l~~li~~cl~~dp~~RPt~~ei~~~L~~~  272 (273)
T d1u46a_         231 GER----------LPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEA  272 (273)
T ss_dssp             CCC----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCC----------CCCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence            000          011123456789999999999999999999999888764


No 34 
>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=100.00  E-value=6.7e-44  Score=378.58  Aligned_cols=251  Identities=24%  Similarity=0.332  Sum_probs=205.5

Q ss_pred             cCCCCCccccccCceEEEEEEe-CCCeEEEEEEEeccc---------hhhHHHHHHHHHHHHhcc-CCceeEEEeeeecC
Q 048430          680 NGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQE---------DRALKSFDTECEVMRRIR-HRNLIKIVSSCSNP  748 (973)
Q Consensus       680 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---------~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~  748 (973)
                      ++|...+.||+|+||+||+|+. .+|+.||||+++...         ....+.+.+|+.++++++ ||||+++++++.++
T Consensus         3 ~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~   82 (277)
T d1phka_           3 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETN   82 (277)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECS
T ss_pred             ccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecccC
Confidence            5788899999999999999985 579999999987542         122456889999999997 99999999999999


Q ss_pred             CeeEEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeeccccc
Q 048430          749 GFKALIMQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAK  828 (973)
Q Consensus       749 ~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~  828 (973)
                      +..|+|||||++|+|.+++.... .+++.+++.++.||++||+|||   +++|+||||||+||+++.++.+||+|||+++
T Consensus        83 ~~~~ivmE~~~~g~L~~~l~~~~-~l~e~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~  158 (277)
T d1phka_          83 TFFFLVFDLMKKGELFDYLTEKV-TLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSC  158 (277)
T ss_dssp             SEEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred             cceEEEEEcCCCchHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HcCCcccccccceEEEcCCCCeEEccchhee
Confidence            99999999999999999998765 7999999999999999999999   7899999999999999999999999999998


Q ss_pred             ccCCCCCcccccccccccccCccCCC------CCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcc
Q 048430          829 LLDGVDPVTQTMTLATIGYMAPEYGS------EGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGA  902 (973)
Q Consensus       829 ~~~~~~~~~~~~~~~~~~y~aPE~~~------~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~  902 (973)
                      ......  ......||+.|+|||.+.      ...++.++||||+||++|||++|+.||.+....  .....+...    
T Consensus       159 ~~~~~~--~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~--~~~~~i~~~----  230 (277)
T d1phka_         159 QLDPGE--KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQM--LMLRMIMSG----  230 (277)
T ss_dssp             ECCTTC--CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHT----
T ss_pred             EccCCC--ceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHH--HHHHHHHhC----
Confidence            765422  234457999999999653      345789999999999999999999999753211  111111110    


Q ss_pred             hhhhcccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430          903 VTEVVDANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD  957 (973)
Q Consensus       903 ~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~  957 (973)
                             ....        .......+++++.+++.+||++||++||+++||++|
T Consensus       231 -------~~~~--------~~~~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~h  270 (277)
T d1phka_         231 -------NYQF--------GSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAH  270 (277)
T ss_dssp             -------CCCC--------CTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred             -------CCCC--------CCcccccCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence                   0000        000112356779999999999999999999999876


No 35 
>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00  E-value=2.4e-44  Score=389.76  Aligned_cols=245  Identities=27%  Similarity=0.315  Sum_probs=206.0

Q ss_pred             cCCCCCccccccCceEEEEEEe-CCCeEEEEEEEeccc---hhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEEE
Q 048430          680 NGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQE---DRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALIM  755 (973)
Q Consensus       680 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~  755 (973)
                      ++|...+.||+|+||+||+|+. .+|+.||||+++...   ....+.+.+|+.++++++||||+++++++.+++..++||
T Consensus         4 ~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivm   83 (316)
T d1fota_           4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM   83 (316)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred             hHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeeeEe
Confidence            5688899999999999999996 579999999997542   334578999999999999999999999999999999999


Q ss_pred             EecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCCCC
Q 048430          756 QYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGVDP  835 (973)
Q Consensus       756 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~  835 (973)
                      |||++|++..++.... .+++..+..++.||+.||+|||   +++||||||||+|||++.++.+||+|||+|+.....  
T Consensus        84 E~~~gg~l~~~~~~~~-~~~~~~~~~~~~qi~~al~~lH---~~~iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~~--  157 (316)
T d1fota_          84 DYIEGGELFSLLRKSQ-RFPNPVAKFYAAEVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV--  157 (316)
T ss_dssp             CCCCSCBHHHHHHHTS-SCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSC--
T ss_pred             eecCCccccccccccc-cccccHHHHHHHHHHHhhhhhc---cCcEEccccCchheeEcCCCCEEEecCccceEeccc--
Confidence            9999999999988765 7889999999999999999999   899999999999999999999999999999876432  


Q ss_pred             cccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhcccccCCCC
Q 048430          836 VTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLLSRE  915 (973)
Q Consensus       836 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~  915 (973)
                        ....+||+.|||||.+.+..++.++||||+||++|||++|+.||.....     ........        ....    
T Consensus       158 --~~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~-----~~~~~~i~--------~~~~----  218 (316)
T d1fota_         158 --TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNT-----MKTYEKIL--------NAEL----  218 (316)
T ss_dssp             --BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH-----HHHHHHHH--------HCCC----
T ss_pred             --cccccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCH-----HHHHHHHH--------cCCC----
Confidence              2345799999999999999999999999999999999999999965221     11111110        0000    


Q ss_pred             chhhhhhHHhHHHHHHHHHHHHHhccccCCCCCC-----CHHHHHHH
Q 048430          916 DEEDADDFATKKTCISYIMSLALKCSAEIPEERI-----NVKDALAD  957 (973)
Q Consensus       916 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rp-----t~~evl~~  957 (973)
                              ..+..+++++.+++.+|++.||++|+     +++|+++|
T Consensus       219 --------~~p~~~s~~~~~li~~~L~~dp~~R~~~~r~t~~~il~H  257 (316)
T d1fota_         219 --------RFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH  257 (316)
T ss_dssp             --------CCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred             --------CCCCCCCHHHHHHHHHHhhhCHHhccccchhhHHHHHcC
Confidence                    00112356688999999999999996     89999886


No 36 
>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=100.00  E-value=2.5e-44  Score=384.40  Aligned_cols=259  Identities=23%  Similarity=0.357  Sum_probs=202.5

Q ss_pred             hcCCCCCccccccCceEEEEEEe-CCCeEEEEEEEeccc---hhhHHHHHHHHHHHHhccCCceeEEEeeeecCC----e
Q 048430          679 TNGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQE---DRALKSFDTECEVMRRIRHRNLIKIVSSCSNPG----F  750 (973)
Q Consensus       679 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----~  750 (973)
                      .++|...+.||+|+||.||+|+. .+|+.||||+++...   ....+.+.+|++++++++||||+++++++...+    .
T Consensus         6 ~drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~   85 (277)
T d1o6ya_           6 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL   85 (277)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEE
T ss_pred             cceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCce
Confidence            36788999999999999999985 579999999997542   344567999999999999999999999986543    4


Q ss_pred             eEEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeeccccccc
Q 048430          751 KALIMQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLL  830 (973)
Q Consensus       751 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~  830 (973)
                      .|+||||+++|+|.+++...+ .+++.++..++.||+.||+|||   +.+||||||||+||+++.++..+++|||.+...
T Consensus        86 ~~lvmE~~~g~~L~~~~~~~~-~l~~~~~~~i~~qi~~al~~lH---~~~iiHrDiKP~NIll~~~~~~~l~d~~~~~~~  161 (277)
T d1o6ya_          86 PYIVMEYVDGVTLRDIVHTEG-PMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAI  161 (277)
T ss_dssp             EEEEEECCCEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTSCEEECCCTTCEEC
T ss_pred             EEEEEECCCCCEehhhhcccC-CCCHHHHHHHHHHHHHHHHHHH---hCCccCccccCcccccCccccceeehhhhhhhh
Confidence            789999999999999988765 7999999999999999999999   799999999999999999999999999998765


Q ss_pred             CCCCC--cccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhcc
Q 048430          831 DGVDP--VTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVD  908 (973)
Q Consensus       831 ~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d  908 (973)
                      .....  ......+||+.|+|||.+.+..++.++||||+||++|||+||+.||......+ .....+..   ....    
T Consensus       162 ~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~-~~~~~~~~---~~~~----  233 (277)
T d1o6ya_         162 ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVS-VAYQHVRE---DPIP----  233 (277)
T ss_dssp             C----------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHC---CCCC----
T ss_pred             ccccccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcCHHH-HHHHHHhc---CCCC----
Confidence            33222  23344579999999999998899999999999999999999999996532111 11111110   0000    


Q ss_pred             cccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCC-CHHHHHHHHHHHH
Q 048430          909 ANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERI-NVKDALADLKKIK  962 (973)
Q Consensus       909 ~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rp-t~~evl~~L~~~~  962 (973)
                                   .......+++++.+++.+||+.||++|| +++|+++.|.+++
T Consensus       234 -------------~~~~~~~~s~~l~~li~~~L~~dp~~R~~sa~~l~~~l~r~~  275 (277)
T d1o6ya_         234 -------------PSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVH  275 (277)
T ss_dssp             -------------GGGTSSSCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred             -------------CchhccCCCHHHHHHHHHHccCCHhHCHhHHHHHHHHHHHHh
Confidence                         0001123456789999999999999999 8999999888764


No 37 
>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=8.3e-44  Score=386.78  Aligned_cols=252  Identities=19%  Similarity=0.284  Sum_probs=207.9

Q ss_pred             hcCCCCCccccccCceEEEEEEe-CCCeEEEEEEEeccchhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEEEEe
Q 048430          679 TNGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQEDRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALIMQY  757 (973)
Q Consensus       679 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  757 (973)
                      .++|...+.||+|+||+||+|+. .+++.||||+++.... ....+.+|++++++++||||+++++++.+++..|+||||
T Consensus         4 ~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~~-~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvmE~   82 (321)
T d1tkia_           4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGT-DQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF   82 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTH-HHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCcc-cHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEec
Confidence            46788999999999999999986 4789999999976543 335688999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCC--CcEEEeecccccccCCCCC
Q 048430          758 MPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDD--MVAHLGDFGIAKLLDGVDP  835 (973)
Q Consensus       758 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~--~~~kl~Dfgla~~~~~~~~  835 (973)
                      |++|+|.+++...+..+++.++..++.||+.||+|||   +.+|+||||||+|||++.+  ..+||+|||+++.....  
T Consensus        83 ~~gg~L~~~i~~~~~~l~e~~~~~i~~qi~~al~yLH---~~~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~--  157 (321)
T d1tkia_          83 ISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLH---SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPG--  157 (321)
T ss_dssp             CCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTT--
T ss_pred             CCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HcCCCcccccccceeecCCCceEEEEcccchhhccccC--
Confidence            9999999999877667999999999999999999999   7999999999999999854  58999999999876432  


Q ss_pred             cccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhcccccCCCC
Q 048430          836 VTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLLSRE  915 (973)
Q Consensus       836 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~  915 (973)
                      .......+|+.|+|||...+..++.++||||+||++|||++|+.||......     ..+..        +......  .
T Consensus       158 ~~~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~-----~~~~~--------i~~~~~~--~  222 (321)
T d1tkia_         158 DNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ-----QIIEN--------IMNAEYT--F  222 (321)
T ss_dssp             CEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHH-----HHHHH--------HHHTCCC--C
T ss_pred             CcccccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCHH-----HHHHH--------HHhCCCC--C
Confidence            2234457899999999999999999999999999999999999999653211     11111        0000000  0


Q ss_pred             chhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430          916 DEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD  957 (973)
Q Consensus       916 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~  957 (973)
                            .......+++++.+++.+|++.||++|||++|+++|
T Consensus       223 ------~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~h  258 (321)
T d1tkia_         223 ------DEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQH  258 (321)
T ss_dssp             ------CHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             ------ChhhccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence                  001112346678999999999999999999999986


No 38 
>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.1e-43  Score=385.36  Aligned_cols=261  Identities=22%  Similarity=0.357  Sum_probs=213.0

Q ss_pred             hcCCCCCccccccCceEEEEEEe------CCCeEEEEEEEeccc-hhhHHHHHHHHHHHHhc-cCCceeEEEeeeecCCe
Q 048430          679 TNGFGESNLLGSGSFDNVYKATL------ANGVSVAVKVFNLQE-DRALKSFDTECEVMRRI-RHRNLIKIVSSCSNPGF  750 (973)
Q Consensus       679 ~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~  750 (973)
                      .++|...++||+|+||.||+|++      .+++.||||+++... ......+.+|+.+++++ +|||||+++++|.+++.
T Consensus        22 ~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~~~  101 (311)
T d1t46a_          22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP  101 (311)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             HHHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeCCE
Confidence            35777789999999999999985      356789999997653 34456799999999999 69999999999999999


Q ss_pred             eEEEEEecCCCCHHHHhhhCC-----------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEe
Q 048430          751 KALIMQYMPQGSLEKWLYSHN-----------------YSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLL  813 (973)
Q Consensus       751 ~~lv~e~~~~gsL~~~l~~~~-----------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill  813 (973)
                      .++|||||++|+|.++++...                 ..+++..+..++.||++||+|||   +++||||||||+||++
T Consensus       102 ~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH---~~~ivHrDLKp~NIl~  178 (311)
T d1t46a_         102 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNILL  178 (311)
T ss_dssp             CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEE
T ss_pred             EEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccccccccc
Confidence            999999999999999997643                 35899999999999999999999   7999999999999999


Q ss_pred             CCCCcEEEeecccccccCCCCC-cccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHH
Q 048430          814 DDDMVAHLGDFGIAKLLDGVDP-VTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLK  892 (973)
Q Consensus       814 ~~~~~~kl~Dfgla~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~  892 (973)
                      +.++.+|++|||.++....... .......||+.|+|||.+.++.++.++|||||||++|||+|++.|+.........+.
T Consensus       179 ~~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~~~~~  258 (311)
T d1t46a_         179 THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFY  258 (311)
T ss_dssp             ETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHH
T ss_pred             cccCcccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence            9999999999999987654333 233456789999999999999999999999999999999996555433333322233


Q ss_pred             HHHHhhCCcchhhhcccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHHH
Q 048430          893 QWVAESLPGAVTEVVDANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIKKI  964 (973)
Q Consensus       893 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~~~  964 (973)
                      ..+.....            .          ..+..+++++.+|+.+||+.||++||||+|+++.|+++...
T Consensus       259 ~~i~~~~~------------~----------~~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~~L~~~i~~  308 (311)
T d1t46a_         259 KMIKEGFR------------M----------LSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISE  308 (311)
T ss_dssp             HHHHHTCC------------C----------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHhcCCC------------C----------CCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhhcc
Confidence            33322111            0          01122456789999999999999999999999999877543


No 39 
>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.3e-44  Score=390.32  Aligned_cols=257  Identities=26%  Similarity=0.470  Sum_probs=203.9

Q ss_pred             cCCCCCccccccCceEEEEEEeC-CCe--EEEEEEEecc-chhhHHHHHHHHHHHHhc-cCCceeEEEeeeecCCeeEEE
Q 048430          680 NGFGESNLLGSGSFDNVYKATLA-NGV--SVAVKVFNLQ-EDRALKSFDTECEVMRRI-RHRNLIKIVSSCSNPGFKALI  754 (973)
Q Consensus       680 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~--~vavK~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv  754 (973)
                      ++|...++||+|+||.||+|++. ++.  .||||.++.. .....+.|.+|+++++++ +||||++++++|.+.+..++|
T Consensus        10 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~iV   89 (309)
T d1fvra_          10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA   89 (309)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred             HHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeEEE
Confidence            56777899999999999999864 444  4777877543 233456899999999998 799999999999999999999


Q ss_pred             EEecCCCCHHHHhhhC---------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcE
Q 048430          755 MQYMPQGSLEKWLYSH---------------NYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVA  819 (973)
Q Consensus       755 ~e~~~~gsL~~~l~~~---------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~  819 (973)
                      |||+++|+|.++++..               ...+++.++..++.|||.||.|+|   +++|+||||||+|||++.++.+
T Consensus        90 ~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH---~~~iiHrDlkp~NIL~~~~~~~  166 (309)
T d1fvra_          90 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVA  166 (309)
T ss_dssp             ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGGGCE
T ss_pred             EEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhh---cCCccccccccceEEEcCCCce
Confidence            9999999999999754               257999999999999999999999   7999999999999999999999


Q ss_pred             EEeecccccccCCCCCcccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCC-CCCccccCcccHHHHHHhh
Q 048430          820 HLGDFGIAKLLDGVDPVTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRK-PTNEMFTGEMSLKQWVAES  898 (973)
Q Consensus       820 kl~Dfgla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~-p~~~~~~~~~~~~~~~~~~  898 (973)
                      ||+|||+|+.....  .......||..|+|||.+..+.++.++|||||||++|||++|.. ||...     ...+.....
T Consensus       167 kl~DfG~a~~~~~~--~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~-----~~~~~~~~i  239 (309)
T d1fvra_         167 KIADFGLSRGQEVY--VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGM-----TCAELYEKL  239 (309)
T ss_dssp             EECCTTCEESSCEE--CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTC-----CHHHHHHHG
T ss_pred             EEcccccccccccc--ccccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCC-----CHHHHHHHH
Confidence            99999999865321  12233468999999999999999999999999999999999765 55432     112221111


Q ss_pred             CCcchhhhcccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHHHH
Q 048430          899 LPGAVTEVVDANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIKKIL  965 (973)
Q Consensus       899 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~~~~  965 (973)
                      ..+         .          +...+..+++++.+++.+||+.||++||||+||+++|+++.+..
T Consensus       240 ~~~---------~----------~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~L~~i~~~~  287 (309)
T d1fvra_         240 PQG---------Y----------RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEER  287 (309)
T ss_dssp             GGT---------C----------CCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred             Hhc---------C----------CCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhcC
Confidence            100         0          01112235677999999999999999999999999999987643


No 40 
>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}
Probab=100.00  E-value=1.7e-43  Score=390.60  Aligned_cols=250  Identities=20%  Similarity=0.268  Sum_probs=200.7

Q ss_pred             hcCCCCCccccccCceEEEEEEe-CCCeEEEEEEEeccc---hhhHHHHHHH---HHHHHhccCCceeEEEeeeecCCee
Q 048430          679 TNGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQE---DRALKSFDTE---CEVMRRIRHRNLIKIVSSCSNPGFK  751 (973)
Q Consensus       679 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e---~~~l~~l~h~niv~l~~~~~~~~~~  751 (973)
                      .++|...++||+|+||.||+|+. .+|+.||||++....   ......+.+|   +.+++.++||||+++++++.+++..
T Consensus         3 lddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~~   82 (364)
T d1omwa3           3 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL   82 (364)
T ss_dssp             STTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred             HHhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCEE
Confidence            36788999999999999999996 479999999986432   1122334444   5666677899999999999999999


Q ss_pred             EEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccC
Q 048430          752 ALIMQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLD  831 (973)
Q Consensus       752 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~  831 (973)
                      |+||||+++|+|.+++.... .+++.++..++.||+.||+|||   +++||||||||+|||++.++.+||+|||+|+...
T Consensus        83 ~ivmE~~~gg~L~~~l~~~~-~~~e~~~~~~~~qi~~aL~ylH---~~~iiHrDlKP~NILl~~~g~iKl~DFGla~~~~  158 (364)
T d1omwa3          83 SFILDLMNGGDLHYHLSQHG-VFSEADMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFS  158 (364)
T ss_dssp             EEEECCCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECSSSCEEECCCTTCEECS
T ss_pred             EEEEEecCCCcHHHHHHhcc-cccHHHHHHHHHHHHHHHHHHH---HCCccceeeccceeEEcCCCcEEEeeeceeeecC
Confidence            99999999999999998765 6899999999999999999999   8999999999999999999999999999998764


Q ss_pred             CCCCcccccccccccccCccCCCC-CCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhcccc
Q 048430          832 GVDPVTQTMTLATIGYMAPEYGSE-GIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDAN  910 (973)
Q Consensus       832 ~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  910 (973)
                      ..   ......||+.|+|||.+.. ..++.++|||||||++|||+||+.||......+  .............       
T Consensus       159 ~~---~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~--~~~~~~~~~~~~~-------  226 (364)
T d1omwa3         159 KK---KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD--KHEIDRMTLTMAV-------  226 (364)
T ss_dssp             SS---CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSC--HHHHHHHSSSCCC-------
T ss_pred             CC---cccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHhcccCCC-------
Confidence            32   2334579999999998764 568999999999999999999999997643222  1111111111100       


Q ss_pred             cCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCC-----HHHHHHH
Q 048430          911 LLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERIN-----VKDALAD  957 (973)
Q Consensus       911 l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt-----~~evl~~  957 (973)
                                   ..+..+++++.+++.+||+.||++|||     ++|+++|
T Consensus       227 -------------~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~H  265 (364)
T d1omwa3         227 -------------ELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKES  265 (364)
T ss_dssp             -------------CCCSSSCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHTS
T ss_pred             -------------CCCCCCCHHHHHHHHHHcccCHHHhCCCcccCHHHHHcC
Confidence                         001124567899999999999999999     6888876


No 41 
>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=5.9e-44  Score=385.14  Aligned_cols=258  Identities=28%  Similarity=0.460  Sum_probs=205.5

Q ss_pred             hcCCCCCccccccCceEEEEEEeC--------CCeEEEEEEEeccch-hhHHHHHHHHHHHHhc-cCCceeEEEeeeecC
Q 048430          679 TNGFGESNLLGSGSFDNVYKATLA--------NGVSVAVKVFNLQED-RALKSFDTECEVMRRI-RHRNLIKIVSSCSNP  748 (973)
Q Consensus       679 ~~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~  748 (973)
                      .++|...+.||+|+||.||+|+..        ++..||||+++.... .....+.+|+..+.++ +||||++++++|.++
T Consensus        12 ~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~~   91 (299)
T d1fgka_          12 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD   91 (299)
T ss_dssp             GGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             HHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEecccccccC
Confidence            356777899999999999999842        235799999876543 4457889999999888 799999999999999


Q ss_pred             CeeEEEEEecCCCCHHHHhhhCC---------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEe
Q 048430          749 GFKALIMQYMPQGSLEKWLYSHN---------------YSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLL  813 (973)
Q Consensus       749 ~~~~lv~e~~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill  813 (973)
                      +..++||||+++|+|.+++....               ..+++.+++.++.||+.||+|||   +.+||||||||+|||+
T Consensus        92 ~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH---~~~ivHrDiKp~NiLl  168 (299)
T d1fgka_          92 GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLV  168 (299)
T ss_dssp             SSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEE
T ss_pred             CeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhh---hCCEEeeeecccceee
Confidence            99999999999999999997653               35899999999999999999999   8999999999999999


Q ss_pred             CCCCcEEEeecccccccCCCCCc-ccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCccccCcccH
Q 048430          814 DDDMVAHLGDFGIAKLLDGVDPV-TQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFT-RRKPTNEMFTGEMSL  891 (973)
Q Consensus       814 ~~~~~~kl~Dfgla~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~ellt-g~~p~~~~~~~~~~~  891 (973)
                      +.++.+||+|||+++........ ......+++.|+|||.+.++.++.++|||||||++|||++ |..||......  .+
T Consensus       169 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~~--~~  246 (299)
T d1fgka_         169 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE--EL  246 (299)
T ss_dssp             CTTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--HH
T ss_pred             cCCCCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCCCHH--HH
Confidence            99999999999999876543322 2344568999999999999999999999999999999998 67777542211  11


Q ss_pred             HHHHHhhCCcchhhhcccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHH
Q 048430          892 KQWVAESLPGAVTEVVDANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIKK  963 (973)
Q Consensus       892 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~~  963 (973)
                      ...+...            ..          ...+..+++++.+++.+||+.||++||||.||++.|+++.+
T Consensus       247 ~~~i~~~------------~~----------~~~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~~L~~i~a  296 (299)
T d1fgka_         247 FKLLKEG------------HR----------MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA  296 (299)
T ss_dssp             HHHHHTT------------CC----------CCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHcC------------CC----------CCCCccchHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHhh
Confidence            1111110            00          01112345679999999999999999999999999998864


No 42 
>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.5e-43  Score=386.81  Aligned_cols=252  Identities=21%  Similarity=0.257  Sum_probs=199.6

Q ss_pred             hcCCCCCc-cccccCceEEEEEEe-CCCeEEEEEEEeccchhhHHHHHHHHHHHHhc-cCCceeEEEeeeec----CCee
Q 048430          679 TNGFGESN-LLGSGSFDNVYKATL-ANGVSVAVKVFNLQEDRALKSFDTECEVMRRI-RHRNLIKIVSSCSN----PGFK  751 (973)
Q Consensus       679 ~~~~~~~~-~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~----~~~~  751 (973)
                      .++|.+.. +||+|+||.||+|+. .+++.||||+++..     +.+.+|+.++.++ +||||++++++|.+    ....
T Consensus        10 ~~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~-----~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~   84 (335)
T d2ozaa1          10 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL   84 (335)
T ss_dssp             GGTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred             ccCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECCc-----HHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEE
Confidence            45787764 699999999999985 57999999998633     4577899987655 89999999999864    4678


Q ss_pred             EEEEEecCCCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCC---CCcEEEeecccc
Q 048430          752 ALIMQYMPQGSLEKWLYSHN-YSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDD---DMVAHLGDFGIA  827 (973)
Q Consensus       752 ~lv~e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~---~~~~kl~Dfgla  827 (973)
                      |+|||||++|+|.+++.... ..+++.+++.++.||+.||+|||   +.+|+||||||+||+++.   ++.+||+|||+|
T Consensus        85 ~ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH---~~~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a  161 (335)
T d2ozaa1          85 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFA  161 (335)
T ss_dssp             EEEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred             EEEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHH---HcCCcccccccccccccccccccccccccccee
Confidence            99999999999999998753 46999999999999999999999   899999999999999985   567999999999


Q ss_pred             cccCCCCCcccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhc
Q 048430          828 KLLDGVDPVTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVV  907 (973)
Q Consensus       828 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  907 (973)
                      +......  ......||+.|+|||.+.+..++.++||||+||++|||+||+.||.+..... ........          
T Consensus       162 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~-~~~~~~~~----------  228 (335)
T d2ozaa1         162 KETTSHN--SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA-ISPGMKTR----------  228 (335)
T ss_dssp             EECCCCC--CCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC---------C----------
T ss_pred             eeccCCC--ccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHH-HHHHHHHH----------
Confidence            8765332  2344679999999999999999999999999999999999999996532211 11111000          


Q ss_pred             ccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430          908 DANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD  957 (973)
Q Consensus       908 d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~  957 (973)
                         ........   .......+++++.+++.+||+.||++|||+.|+++|
T Consensus       229 ---i~~~~~~~---~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~h  272 (335)
T d2ozaa1         229 ---IRMGQYEF---PNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH  272 (335)
T ss_dssp             ---CCSCSSSC---CTTHHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             ---HhcCCCCC---CCcccccCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence               00000000   001223467789999999999999999999999886


No 43 
>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00  E-value=2.5e-43  Score=387.08  Aligned_cols=245  Identities=22%  Similarity=0.249  Sum_probs=206.1

Q ss_pred             cCCCCCccccccCceEEEEEEe-CCCeEEEEEEEeccc---hhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEEE
Q 048430          680 NGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQE---DRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALIM  755 (973)
Q Consensus       680 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~  755 (973)
                      ++|...+.||+|+||.||+|+. .+|+.||||+++...   ....+.+.+|++++++++||||+++++++.+....++||
T Consensus        41 d~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~v~  120 (350)
T d1rdqe_          41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM  120 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeeccccccccccccccc
Confidence            5788899999999999999986 579999999986542   234567899999999999999999999999999999999


Q ss_pred             EecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCCCC
Q 048430          756 QYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGVDP  835 (973)
Q Consensus       756 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~  835 (973)
                      ||+.+|+|.+++...+ .+++..+..++.||+.||.|||   +++||||||||+|||++.++.+||+|||+|+.....  
T Consensus       121 e~~~~g~l~~~l~~~~-~l~e~~~~~i~~qi~~aL~yLH---~~~iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~~--  194 (350)
T d1rdqe_         121 EYVAGGEMFSHLRRIG-RFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--  194 (350)
T ss_dssp             ECCTTCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC--
T ss_pred             ccccccchhhhHhhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCEecCcCCHHHcccCCCCCEEeeeceeeeecccc--
Confidence            9999999999998765 7999999999999999999999   899999999999999999999999999999876432  


Q ss_pred             cccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhcccccCCCC
Q 048430          836 VTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLLSRE  915 (973)
Q Consensus       836 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~  915 (973)
                        .....||+.|||||.+.+..++.++|||||||++|||+||+.||.+..     .........        ....    
T Consensus       195 --~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~-----~~~~~~~i~--------~~~~----  255 (350)
T d1rdqe_         195 --TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ-----PIQIYEKIV--------SGKV----  255 (350)
T ss_dssp             --BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHH--------HCCC----
T ss_pred             --cccccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcC-----HHHHHHHHh--------cCCC----
Confidence              234579999999999999999999999999999999999999996521     111111110        0000    


Q ss_pred             chhhhhhHHhHHHHHHHHHHHHHhccccCCCCCC-----CHHHHHHH
Q 048430          916 DEEDADDFATKKTCISYIMSLALKCSAEIPEERI-----NVKDALAD  957 (973)
Q Consensus       916 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rp-----t~~evl~~  957 (973)
                              ..+..+++++.+++.+||+.||++|+     +++|+++|
T Consensus       256 --------~~p~~~s~~~~~li~~~L~~dP~kR~~~~r~t~~ell~H  294 (350)
T d1rdqe_         256 --------RFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH  294 (350)
T ss_dssp             --------CCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTS
T ss_pred             --------CCCccCCHHHHHHHHHHhhhCHHhccccccccHHHHHcC
Confidence                    00112456788999999999999994     89999875


No 44 
>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.5e-43  Score=384.19  Aligned_cols=248  Identities=24%  Similarity=0.287  Sum_probs=203.8

Q ss_pred             cCCCCCccccccCceEEEEEEe-CCCeEEEEEEEeccc---hhhHHHHHHHHHHHH-hccCCceeEEEeeeecCCeeEEE
Q 048430          680 NGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQE---DRALKSFDTECEVMR-RIRHRNLIKIVSSCSNPGFKALI  754 (973)
Q Consensus       680 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~-~l~h~niv~l~~~~~~~~~~~lv  754 (973)
                      ++|...+.||+|+||+||+|+. .+++.||||+++...   ....+.+..|..++. .++||||+++++++.+++..|+|
T Consensus         2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yiv   81 (320)
T d1xjda_           2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV   81 (320)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred             CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEE
Confidence            5788899999999999999986 479999999997542   333456777777765 68999999999999999999999


Q ss_pred             EEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCCC
Q 048430          755 MQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGVD  834 (973)
Q Consensus       755 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~  834 (973)
                      ||||++|+|.+++.... .+++.++..++.||+.||+|||   +++|+||||||+|||++.++.+||+|||+++..... 
T Consensus        82 mEy~~~g~L~~~i~~~~-~~~e~~~~~~~~qi~~al~ylH---~~~iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~~~-  156 (320)
T d1xjda_          82 MEYLNGGDLMYHIQSCH-KFDLSRATFYAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLG-  156 (320)
T ss_dssp             EECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT-
T ss_pred             EeecCCCcHHHHhhccC-CCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCcccceeecCCCceeccccchhhhcccc-
Confidence            99999999999998765 6899999999999999999999   789999999999999999999999999999865432 


Q ss_pred             CcccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhcccccCCC
Q 048430          835 PVTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVDANLLSR  914 (973)
Q Consensus       835 ~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~  914 (973)
                      ........||+.|+|||.+.+..++.++||||+||++|||++|+.||.+...  ..+...+....+              
T Consensus       157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~--~~~~~~i~~~~~--------------  220 (320)
T d1xjda_         157 DAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDE--EELFHSIRMDNP--------------  220 (320)
T ss_dssp             TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHCCC--------------
T ss_pred             cccccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCH--HHHHHHHHcCCC--------------
Confidence            2333446799999999999999999999999999999999999999965321  111111111000              


Q ss_pred             CchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHH-HHHHH
Q 048430          915 EDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVK-DALAD  957 (973)
Q Consensus       915 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~-evl~~  957 (973)
                               ..+..+++++.+++.+||+.||++||++. |+++|
T Consensus       221 ---------~~p~~~s~~~~dli~~~L~~dP~~R~s~~~~l~~h  255 (320)
T d1xjda_         221 ---------FYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQH  255 (320)
T ss_dssp             ---------CCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGGS
T ss_pred             ---------CCCccCCHHHHHHHHHhcccCCCCCcCHHHHHHhC
Confidence                     01122456789999999999999999995 77653


No 45 
>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.9e-43  Score=381.47  Aligned_cols=273  Identities=23%  Similarity=0.256  Sum_probs=203.7

Q ss_pred             cCCCCCccccccCceEEEEEEe-CCCeEEEEEEEeccc--hhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEEEE
Q 048430          680 NGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQE--DRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALIMQ  756 (973)
Q Consensus       680 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  756 (973)
                      ++|...+.||+|+||+||+|+. .+|+.||||+++...  +...+.+.+|++++++++||||+++++++.+++..|+|||
T Consensus         2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~e   81 (298)
T d1gz8a_           2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE   81 (298)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEEEe
Confidence            5788999999999999999995 679999999986543  2235789999999999999999999999999999999999


Q ss_pred             ecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCCCCc
Q 048430          757 YMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGVDPV  836 (973)
Q Consensus       757 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~  836 (973)
                      |+.++.+..........+++.++..++.||+.||+|||   +++||||||||+|||++.++.+||+|||.|+..... ..
T Consensus        82 ~~~~~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH---~~~IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~-~~  157 (298)
T d1gz8a_          82 FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VR  157 (298)
T ss_dssp             CCSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSTTHHHHHCCC-SB
T ss_pred             ecCCchhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhh---cCCEEccccCchheeecccCcceeccCCcceeccCC-cc
Confidence            99764444443444567999999999999999999999   799999999999999999999999999999876432 23


Q ss_pred             ccccccccccccCccCCCCC-CCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhC-Cc-chhhhccc--cc
Q 048430          837 TQTMTLATIGYMAPEYGSEG-IVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESL-PG-AVTEVVDA--NL  911 (973)
Q Consensus       837 ~~~~~~~~~~y~aPE~~~~~-~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~-~~-~~~~~~d~--~l  911 (973)
                      ......||+.|+|||..... .++.++||||+||++|||++|+.||.+....+ .+........ +. ........  ..
T Consensus       158 ~~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~  236 (298)
T d1gz8a_         158 TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID-QLFRIFRTLGTPDEVVWPGVTSMPDY  236 (298)
T ss_dssp             CTTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCTTTSTTGGGSTTC
T ss_pred             cceeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHHH-HHHHHHHhcCCCchhhcccccccccc
Confidence            34445799999999976554 46899999999999999999999997532211 1222222111 11 11110000  00


Q ss_pred             CCCC-chhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430          912 LSRE-DEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD  957 (973)
Q Consensus       912 ~~~~-~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~  957 (973)
                      .... .............+++++.+++.+|++.||++|||++|+++|
T Consensus       237 ~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H  283 (298)
T d1gz8a_         237 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH  283 (298)
T ss_dssp             CTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             ccccccccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence            0000 000001111112345778999999999999999999999987


No 46 
>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.1e-43  Score=381.93  Aligned_cols=267  Identities=23%  Similarity=0.250  Sum_probs=196.9

Q ss_pred             CccccccCceEEEEEEe-CCCeEEEEEEEeccch-----hhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEEEEec
Q 048430          685 SNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQED-----RALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALIMQYM  758 (973)
Q Consensus       685 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~  758 (973)
                      .++||+|+||+||+|+. .+|+.||||+++....     ...+.+.+|+.++++++||||+++++++..++..++||||+
T Consensus         3 l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~~   82 (299)
T d1ua2a_           3 LDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFM   82 (299)
T ss_dssp             EEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEECC
T ss_pred             ceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhhhh
Confidence            57899999999999995 5799999999865432     12356889999999999999999999999999999999999


Q ss_pred             CCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCCCCccc
Q 048430          759 PQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGVDPVTQ  838 (973)
Q Consensus       759 ~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~  838 (973)
                      .++++..+.. ....+++.++..++.||+.||+|||   +++|+||||||+|||++.++.+||+|||+|+...... ...
T Consensus        83 ~~~~~~~~~~-~~~~l~~~~~~~~~~qil~aL~~lH---~~~iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~-~~~  157 (299)
T d1ua2a_          83 ETDLEVIIKD-NSLVLTPSHIKAYMLMTLQGLEYLH---QHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPN-RAY  157 (299)
T ss_dssp             SEEHHHHHTT-CCSSCCSSHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCC-CCC
T ss_pred             cchHHhhhhh-cccCCCHHHHHHHHHHHHHHHHHhh---ccceecccCCcceEEecCCCccccccCccccccCCCc-ccc
Confidence            8876666554 3447999999999999999999999   8999999999999999999999999999998765332 223


Q ss_pred             ccccccccccCccCCCC-CCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCC---cchhhhccccc-CC
Q 048430          839 TMTLATIGYMAPEYGSE-GIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLP---GAVTEVVDANL-LS  913 (973)
Q Consensus       839 ~~~~~~~~y~aPE~~~~-~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~d~~l-~~  913 (973)
                      ...+||+.|+|||.+.. ..++.++||||+||++|||++|+.||......+ .+.........   ..+........ ..
T Consensus       158 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~-~l~~i~~~~~~~~~~~~~~~~~~~~~~~  236 (299)
T d1ua2a_         158 THQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLD-QLTRIFETLGTPTEEQWPDMCSLPDYVT  236 (299)
T ss_dssp             CCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCTTTSSSTTSSTTCCC
T ss_pred             cceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHH-HHHHHHHhcCCCChhhccchhccchhhh
Confidence            34579999999998764 467999999999999999999999986532211 11111111110   00000000000 00


Q ss_pred             CCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430          914 REDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD  957 (973)
Q Consensus       914 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~  957 (973)
                      ................++++.+++.+||+.||++|||++|+++|
T Consensus       237 ~~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~H  280 (299)
T d1ua2a_         237 FKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM  280 (299)
T ss_dssp             CCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred             hccCCCCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhCC
Confidence            00000000011112345779999999999999999999999986


No 47 
>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.2e-43  Score=384.26  Aligned_cols=258  Identities=24%  Similarity=0.409  Sum_probs=209.4

Q ss_pred             hcCCCCCccccccCceEEEEEEeC------CCeEEEEEEEeccc-hhhHHHHHHHHHHHHhccCCceeEEEeeeecCCee
Q 048430          679 TNGFGESNLLGSGSFDNVYKATLA------NGVSVAVKVFNLQE-DRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFK  751 (973)
Q Consensus       679 ~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~  751 (973)
                      .++|...+.||+|+||.||+|.+.      +++.||||+++... ......|.+|+.++++++||||++++++|..++..
T Consensus        19 ~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~   98 (308)
T d1p4oa_          19 REKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPT   98 (308)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSC
T ss_pred             HHHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEEecCCce
Confidence            356777899999999999999853      36789999997543 34456799999999999999999999999999999


Q ss_pred             EEEEEecCCCCHHHHhhhCC---------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEe
Q 048430          752 ALIMQYMPQGSLEKWLYSHN---------YSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLG  822 (973)
Q Consensus       752 ~lv~e~~~~gsL~~~l~~~~---------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~  822 (973)
                      ++||||+++|+|.+++....         ..+++..+.+++.|+|+||.|||   +++|+||||||+|||++.++.+||+
T Consensus        99 ~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH---~~~ivHrDlk~~NiLld~~~~~Kl~  175 (308)
T d1p4oa_          99 LVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIG  175 (308)
T ss_dssp             EEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCSGGGEEECTTCCEEEC
T ss_pred             eEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHh---hCCeeeceEcCCceeecCCceEEEe
Confidence            99999999999999987532         35789999999999999999999   7899999999999999999999999


Q ss_pred             ecccccccCCCCCc-ccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCC-CCCCccccCcccHHHHHHhhCC
Q 048430          823 DFGIAKLLDGVDPV-TQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRR-KPTNEMFTGEMSLKQWVAESLP  900 (973)
Q Consensus       823 Dfgla~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~-~p~~~~~~~~~~~~~~~~~~~~  900 (973)
                      |||+|+........ ......+|+.|+|||.+.+..++.++|||||||++|||+||+ .||...     ...++......
T Consensus       176 DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~-----~~~~~~~~i~~  250 (308)
T d1p4oa_         176 DFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL-----SNEQVLRFVME  250 (308)
T ss_dssp             CTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTS-----CHHHHHHHHHT
T ss_pred             ecccceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCC-----CHHHHHHHHHh
Confidence            99999876433222 233346899999999999999999999999999999999985 555432     22222221111


Q ss_pred             cchhhhcccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHH
Q 048430          901 GAVTEVVDANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIKK  963 (973)
Q Consensus       901 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~~  963 (973)
                      +.        .           ...+..+++.+.+++.+||+.+|++||||.||+++|++..+
T Consensus       251 ~~--------~-----------~~~p~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~~~  294 (308)
T d1p4oa_         251 GG--------L-----------LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME  294 (308)
T ss_dssp             TC--------C-----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred             CC--------C-----------CCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence            11        0           01112356679999999999999999999999999987643


No 48 
>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}
Probab=100.00  E-value=7.3e-43  Score=375.22  Aligned_cols=272  Identities=19%  Similarity=0.219  Sum_probs=203.4

Q ss_pred             cCCCCCccccccCceEEEEEEeCCCeEEEEEEEeccc--hhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEEEEe
Q 048430          680 NGFGESNLLGSGSFDNVYKATLANGVSVAVKVFNLQE--DRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALIMQY  757 (973)
Q Consensus       680 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  757 (973)
                      ++|...++||+|+||+||+|+.++|+.||||+++...  +...+.+.+|+.++++++||||+++++++..++..++|+|+
T Consensus         2 ~~Y~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e~   81 (286)
T d1ob3a_           2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH   81 (286)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             CCceeccEEecCCCcEEEEEEeCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEEEe
Confidence            5788899999999999999999999999999996543  23357899999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCCCCcc
Q 048430          758 MPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGVDPVT  837 (973)
Q Consensus       758 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~  837 (973)
                      +.++.+..+... ...+++..+..++.||+.||+|||   +.+||||||||+|||++.++.+|++|||.+....... ..
T Consensus        82 ~~~~~~~~~~~~-~~~l~~~~~~~i~~qi~~~L~~LH---~~~IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~~-~~  156 (286)
T d1ob3a_          82 LDQDLKKLLDVC-EGGLESVTAKSFLLQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPV-RK  156 (286)
T ss_dssp             CSEEHHHHHHTS-TTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-----
T ss_pred             ehhhhHHHHHhh-cCCcchhhhHHHHHHHHHHHHHhc---cCcEEecCCCCceeeEcCCCCEEecccccceecccCc-cc
Confidence            987666555544 458999999999999999999999   7899999999999999999999999999998765322 22


Q ss_pred             cccccccccccCccCCCC-CCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCC---cchhhhccc-ccC
Q 048430          838 QTMTLATIGYMAPEYGSE-GIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLP---GAVTEVVDA-NLL  912 (973)
Q Consensus       838 ~~~~~~~~~y~aPE~~~~-~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~d~-~l~  912 (973)
                      .....+++.|+|||.+.. ..++.++||||+||++|||++|+.||......+ .+.........   ..+...... ...
T Consensus       157 ~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~  235 (286)
T d1ob3a_         157 YTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEAD-QLMRIFRILGTPNSKNWPNVTELPKYD  235 (286)
T ss_dssp             -----CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCTTTSTTGGGSTTCC
T ss_pred             cceecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHH-HHHHHHHhhCCCChhhccchhhhhhcc
Confidence            344568999999997765 457999999999999999999999997532211 11221111111   001111000 000


Q ss_pred             -CCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430          913 -SREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD  957 (973)
Q Consensus       913 -~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~  957 (973)
                       .................++++.+++.+|++.||++|||++|+++|
T Consensus       236 ~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~H  281 (286)
T d1ob3a_         236 PNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH  281 (286)
T ss_dssp             TTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             cccccccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence             000000011111112345678999999999999999999999875


No 49 
>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.5e-43  Score=376.59  Aligned_cols=240  Identities=21%  Similarity=0.277  Sum_probs=197.3

Q ss_pred             cCCCCCccccccCceEEEEEEe-CCCeEEEEEEEeccch------hhHHHHHHHHHHHHhcc--CCceeEEEeeeecCCe
Q 048430          680 NGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQED------RALKSFDTECEVMRRIR--HRNLIKIVSSCSNPGF  750 (973)
Q Consensus       680 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~------~~~~~~~~e~~~l~~l~--h~niv~l~~~~~~~~~  750 (973)
                      ++|...+.||+|+||+||+|+. .+|+.||||+++....      .....+.+|+.++++++  ||||+++++++.+++.
T Consensus         4 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~~   83 (273)
T d1xwsa_           4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS   83 (273)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSE
T ss_pred             CeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCCe
Confidence            5788899999999999999995 5799999999875421      12234678999999996  8999999999999999


Q ss_pred             eEEEEEecCC-CCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCC-CCcEEEeeccccc
Q 048430          751 KALIMQYMPQ-GSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDD-DMVAHLGDFGIAK  828 (973)
Q Consensus       751 ~~lv~e~~~~-gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~-~~~~kl~Dfgla~  828 (973)
                      .++||||+.+ +++.+++.... .+++.+++.++.||+.||+|||   +++|+||||||+||+++. ++.+||+|||+|+
T Consensus        84 ~~lv~e~~~~~~~l~~~~~~~~-~l~e~~~~~~~~qi~~al~~lH---~~~iiHrDiKp~NIll~~~~~~vkl~DFG~a~  159 (273)
T d1xwsa_          84 FVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGA  159 (273)
T ss_dssp             EEEEEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred             EEEEEEeccCcchHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCCccccCcccceEEecCCCeEEECccccce
Confidence            9999999976 68888887654 7999999999999999999999   899999999999999985 4799999999998


Q ss_pred             ccCCCCCcccccccccccccCccCCCCCCC-CcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhc
Q 048430          829 LLDGVDPVTQTMTLATIGYMAPEYGSEGIV-SISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVV  907 (973)
Q Consensus       829 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  907 (973)
                      ....   .......||+.|+|||++.+..+ +.++||||+||++|||++|+.||....       .....          
T Consensus       160 ~~~~---~~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~-------~i~~~----------  219 (273)
T d1xwsa_         160 LLKD---TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE-------EIIRG----------  219 (273)
T ss_dssp             ECCS---SCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH-------HHHHC----------
T ss_pred             eccc---ccccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCch-------HHhhc----------
Confidence            6542   23344679999999998876655 677999999999999999999986421       11110          


Q ss_pred             ccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430          908 DANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD  957 (973)
Q Consensus       908 d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~  957 (973)
                        ...            .+..+++++.+++.+||+.||++|||++|+++|
T Consensus       220 --~~~------------~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~h  255 (273)
T d1xwsa_         220 --QVF------------FRQRVSSECQHLIRWCLALRPSDRPTFEEIQNH  255 (273)
T ss_dssp             --CCC------------CSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             --ccC------------CCCCCCHHHHHHHHHHccCCHhHCcCHHHHhcC
Confidence              000            001235678999999999999999999999986


No 50 
>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.3e-42  Score=377.26  Aligned_cols=270  Identities=23%  Similarity=0.286  Sum_probs=202.4

Q ss_pred             hcCCCCCccccccCceEEEEEEe-CC-CeEEEEEEEeccc--hhhHHHHHHHHHHHHhc---cCCceeEEEeeee-----
Q 048430          679 TNGFGESNLLGSGSFDNVYKATL-AN-GVSVAVKVFNLQE--DRALKSFDTECEVMRRI---RHRNLIKIVSSCS-----  746 (973)
Q Consensus       679 ~~~~~~~~~lg~G~~g~Vy~~~~-~~-~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l---~h~niv~l~~~~~-----  746 (973)
                      .++|...+.||+|+||+||+|+. ++ ++.||||+++...  +.....+.+|+.+++.+   +||||++++++|.     
T Consensus         6 ~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~   85 (305)
T d1blxa_           6 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD   85 (305)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECS
T ss_pred             cCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeecccccc
Confidence            46899999999999999999986 34 6789999986542  22234566788877766   7999999999984     


Q ss_pred             cCCeeEEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeeccc
Q 048430          747 NPGFKALIMQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGI  826 (973)
Q Consensus       747 ~~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl  826 (973)
                      .....+++|||++++++..........+++..++.++.|++.||+|||   +++||||||||+|||++.++.+||+|||.
T Consensus        86 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH---~~~ivHrDiKp~NILi~~~~~~kl~dfg~  162 (305)
T d1blxa_          86 RETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGL  162 (305)
T ss_dssp             SEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECSCCS
T ss_pred             cCceEEEEEEeccCCchhhhhhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCEEecCCCccEEEEcCCCCeeecchhh
Confidence            335789999999988776666666667999999999999999999999   79999999999999999999999999999


Q ss_pred             ccccCCCCCcccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhh
Q 048430          827 AKLLDGVDPVTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEV  906 (973)
Q Consensus       827 a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  906 (973)
                      ++....  ........||+.|+|||.+.+..++.++||||+||++|||++|+.||...... ..+...............
T Consensus       163 ~~~~~~--~~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~  239 (305)
T d1blxa_         163 ARIYSF--QMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV-DQLGKILDVIGLPGEEDW  239 (305)
T ss_dssp             CCCCCG--GGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCCCCGGGS
T ss_pred             hhhhcc--cccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCHH-HHHHHHHHhhCCCchhcc
Confidence            876432  22344567999999999999999999999999999999999999999753221 112222221111000000


Q ss_pred             ------cccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430          907 ------VDANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD  957 (973)
Q Consensus       907 ------~d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~  957 (973)
                            ......... ..  .........++.+.+|+.+||+.||++|||++|+++|
T Consensus       240 ~~~~~~~~~~~~~~~-~~--~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~H  293 (305)
T d1blxa_         240 PRDVALPRQAFHSKS-AQ--PIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH  293 (305)
T ss_dssp             CTTCSSCGGGSCCCC-CC--CGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             cccccchhhhhcccc-cc--chhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence                  000000000 00  0011112345678899999999999999999999986


No 51 
>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=5.4e-41  Score=366.64  Aligned_cols=273  Identities=22%  Similarity=0.299  Sum_probs=198.8

Q ss_pred             hcCCCCCccccccCceEEEEEEe-CCCeEEEEEEEeccc--hhhHHHHHHHHHHHHhccCCceeEEEeeeec--------
Q 048430          679 TNGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQE--DRALKSFDTECEVMRRIRHRNLIKIVSSCSN--------  747 (973)
Q Consensus       679 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--------  747 (973)
                      .++|...+.||+|+||+||+|+. .+|+.||||++....  +...+.+.+|+.++++++||||+++++++..        
T Consensus         9 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~   88 (318)
T d3blha1           9 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC   88 (318)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC--------
T ss_pred             cCCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeeccccccccc
Confidence            36788999999999999999996 579999999986542  3345778999999999999999999998754        


Q ss_pred             CCeeEEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccc
Q 048430          748 PGFKALIMQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIA  827 (973)
Q Consensus       748 ~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla  827 (973)
                      .+..++||||+.++.+..+. .....++...++.+++|++.||.|||   +.+|+||||||+|||++.++.+|++|||++
T Consensus        89 ~~~~~iv~e~~~~~~~~~~~-~~~~~~~~~~~~~i~~qil~~l~~lH---~~~ivHrDlKp~NILl~~~~~~kl~dfg~~  164 (318)
T d3blha1          89 KGSIYLVFDFCEHDLAGLLS-NVLVKFTLSEIKRVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLA  164 (318)
T ss_dssp             --CEEEEEECCCEEHHHHHT-CTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTC
T ss_pred             CceEEEEEeccCCCccchhh-hcccccccHHHHHHHHHHHHHHHHhc---cCCEEecCcCchheeecCCCcEEeeeccee
Confidence            35689999999876655444 44457999999999999999999999   899999999999999999999999999999


Q ss_pred             cccCCCCCc---ccccccccccccCccCCCCC-CCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHh-h--CC
Q 048430          828 KLLDGVDPV---TQTMTLATIGYMAPEYGSEG-IVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAE-S--LP  900 (973)
Q Consensus       828 ~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~-~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~-~--~~  900 (973)
                      +........   .....+||+.|+|||.+... .++.++||||+||++|||++|+.||.....  ......+.. .  ..
T Consensus       165 ~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~--~~~~~~i~~~~~~~~  242 (318)
T d3blha1         165 RAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTE--QHQLALISQLCGSIT  242 (318)
T ss_dssp             EECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHHHHHHCCCC
T ss_pred             eecccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCH--HHHHHHHHHhcCCCC
Confidence            766432221   22335799999999987654 689999999999999999999999965321  111111111 1  11


Q ss_pred             cchhhhcc-cccC----CCCc-hhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430          901 GAVTEVVD-ANLL----SRED-EEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD  957 (973)
Q Consensus       901 ~~~~~~~d-~~l~----~~~~-~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~  957 (973)
                      .......+ ....    .... ..............+++.+|+.+||++||++|||++|+++|
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~H  305 (318)
T d3blha1         243 PEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH  305 (318)
T ss_dssp             TTTSTTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             hhhccccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHcC
Confidence            11111111 0000    0000 00111111222345678899999999999999999999986


No 52 
>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=100.00  E-value=3.1e-40  Score=354.81  Aligned_cols=262  Identities=15%  Similarity=0.140  Sum_probs=209.6

Q ss_pred             cCCCCCccccccCceEEEEEEe-CCCeEEEEEEEeccchhhHHHHHHHHHHHHhccC-CceeEEEeeeecCCeeEEEEEe
Q 048430          680 NGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQEDRALKSFDTECEVMRRIRH-RNLIKIVSSCSNPGFKALIMQY  757 (973)
Q Consensus       680 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h-~niv~l~~~~~~~~~~~lv~e~  757 (973)
                      ++|.+.+.||+|+||+||+|+. .+|+.||||++.....  .+.+.+|++.++.++| +|++.+++++......++||||
T Consensus         5 ~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme~   82 (293)
T d1csna_           5 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD--APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDL   82 (293)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT--SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEEC
T ss_pred             CceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEccccC--cHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEEEe
Confidence            5788899999999999999995 4799999998865432  2457789999999975 8999999999999999999999


Q ss_pred             cCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCC-----CCcEEEeecccccccCC
Q 048430          758 MPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDD-----DMVAHLGDFGIAKLLDG  832 (973)
Q Consensus       758 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~-----~~~~kl~Dfgla~~~~~  832 (973)
                      + +++|.+++......+++.++..++.|++.||+|||   +++|+||||||+||+++.     ++.+||+|||+|+....
T Consensus        83 ~-~~~l~~~~~~~~~~~~~~~~~~i~~q~~~~l~~lH---~~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~  158 (293)
T d1csna_          83 L-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIH---EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRD  158 (293)
T ss_dssp             C-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBC
T ss_pred             c-CCCHHHHHHhhccchhhHHHHHHHHHHHHHHHHHH---HCCceeccCCccceeecCcccccCCceEEcccceeEEccc
Confidence            9 67999999887778999999999999999999999   899999999999999974     57899999999987643


Q ss_pred             CCCc------ccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHH-HHHHhhCCcchhh
Q 048430          833 VDPV------TQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLK-QWVAESLPGAVTE  905 (973)
Q Consensus       833 ~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~-~~~~~~~~~~~~~  905 (973)
                      ....      .....+||+.|||||.+.+..++.++|||||||++|||++|+.||........... ..+....     .
T Consensus       159 ~~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~-----~  233 (293)
T d1csna_         159 PVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKK-----Q  233 (293)
T ss_dssp             TTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHH-----H
T ss_pred             CccccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHHHHHhcc-----C
Confidence            2211      22345799999999999999999999999999999999999999975432221110 0010000     0


Q ss_pred             hcccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHHHH
Q 048430          906 VVDANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIKKIL  965 (973)
Q Consensus       906 ~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~~~~  965 (973)
                                   ..........+++++.+++..|++.+|++||+++.+.+.|+++.++.
T Consensus       234 -------------~~~~~~l~~~~p~~l~~ii~~~~~~~~~~rP~y~~l~~~l~~~~~~~  280 (293)
T d1csna_         234 -------------STPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERL  280 (293)
T ss_dssp             -------------HSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred             -------------CCChHHhcCCCCHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHHHc
Confidence                         00000111235677999999999999999999999998888876543


No 53 
>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=100.00  E-value=1.8e-40  Score=358.89  Aligned_cols=259  Identities=19%  Similarity=0.217  Sum_probs=202.4

Q ss_pred             cCCCCCccccccCceEEEEEEe-CCCeEEEEEEEeccchhhHHHHHHHHHHHHhccCCc-eeEEEeeeecCCeeEEEEEe
Q 048430          680 NGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQEDRALKSFDTECEVMRRIRHRN-LIKIVSSCSNPGFKALIMQY  757 (973)
Q Consensus       680 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~l~~~~~~~~~~~lv~e~  757 (973)
                      ++|...+.||+|+||.||+|+. .+|+.||||++......  +.+..|++++++++|+| |+.+.+++.+.+..++||||
T Consensus         7 ~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~--~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme~   84 (299)
T d1ckia_           7 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH--PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMEL   84 (299)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCTTS--CCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred             CEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhccC--HHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEEE
Confidence            4688899999999999999985 57899999998755332  45789999999998766 55556666788899999999


Q ss_pred             cCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCC---CCcEEEeecccccccCCCC
Q 048430          758 MPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDD---DMVAHLGDFGIAKLLDGVD  834 (973)
Q Consensus       758 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~---~~~~kl~Dfgla~~~~~~~  834 (973)
                      + ++++.+.+......+++..+..++.|++.||+|||   +++||||||||+||+++.   +..+|++|||+|+......
T Consensus        85 ~-~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~~  160 (299)
T d1ckia_          85 L-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDAR  160 (299)
T ss_dssp             C-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCTT
T ss_pred             c-CCchhhhhhhccCCCcHHHHHHHHHHHHHHHHHHH---HCCeeeccCCHhhccccccCCCceeeeeccCcceeccccc
Confidence            9 55787777776668999999999999999999999   899999999999999864   5579999999998765332


Q ss_pred             Cc------ccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCccc--HHHHHHhhCCcchhhh
Q 048430          835 PV------TQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMS--LKQWVAESLPGAVTEV  906 (973)
Q Consensus       835 ~~------~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~  906 (973)
                      ..      ......||+.|+|||.+.+..++.++|||||||++|||++|+.||.........  ...+.......     
T Consensus       161 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~-----  235 (299)
T d1ckia_         161 THQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMST-----  235 (299)
T ss_dssp             TCCBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHHHHHHS-----
T ss_pred             cccceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhhcccCCC-----
Confidence            21      223457999999999999989999999999999999999999999764332211  11111000000     


Q ss_pred             cccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHH
Q 048430          907 VDANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALADLKKIKK  963 (973)
Q Consensus       907 ~d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~~  963 (973)
                                    ........+++++.+++..||+.+|++||+++++.+.|+.+..
T Consensus       236 --------------~~~~~~~~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~~~  278 (299)
T d1ckia_         236 --------------PIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFH  278 (299)
T ss_dssp             --------------CHHHHTTTSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHH
T ss_pred             --------------ChhHhccCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHH
Confidence                          0001112456789999999999999999999999988887654


No 54 
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=100.00  E-value=9.9e-41  Score=364.27  Aligned_cols=287  Identities=27%  Similarity=0.479  Sum_probs=256.0

Q ss_pred             ChHHHHhhhccCCCcccCCCCCCCCCCCCCCcc--eEEEEEeeCCC--CcEEEEecCCCCCCC--cCCCCCCCCCCCcEE
Q 048430            1 ALVQLKARISLDPHNFFANNWNLSPTNTSASVC--NWVGVTCSIRH--GRVAALSLPNLSLGG--TLPPHVGNLSFLVSL   74 (973)
Q Consensus         1 al~~~k~~~~~~~~~~~~~~w~~~~~~~~~~~c--~w~gv~C~~~~--~~v~~l~l~~~~l~g--~~~~~l~~l~~L~~L   74 (973)
                      ||++||++|+ || ..+++ |..     ++|||  .|+||+|+..+  +||++|||+++++.|  .+|+++++|++|++|
T Consensus        10 aLl~~k~~~~-~~-~~l~s-W~~-----~~d~C~~~w~gv~C~~~~~~~~v~~L~L~~~~l~g~~~lp~~l~~L~~L~~L   81 (313)
T d1ogqa_          10 ALLQIKKDLG-NP-TTLSS-WLP-----TTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFL   81 (313)
T ss_dssp             HHHHHHHHTT-CC-GGGTT-CCT-----TSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTCSEE
T ss_pred             HHHHHHHHCC-CC-CcCCC-CCC-----CCCCCCCcCCCeEEeCCCCcEEEEEEECCCCCCCCCCCCChHHhcCcccccc
Confidence            7999999997 55 35775 764     68999  49999998754  499999999999999  589999999999999


Q ss_pred             EecC-CCCCCCCCcccccccCCcEEEccCCCCCCCCCccccCCCCCccEEEeeCcccCCCCCccccCCCCCCeEEccCcc
Q 048430           75 NISG-NSFYDTLPNELWHMRRLKIIDFSSNSLSGSLPGDMCNSFTQLESFDVSSNKITGEFPSAIVNISSLKSIRLDNNS  153 (973)
Q Consensus        75 ~L~~-n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~  153 (973)
                      +|++ |++.|.+|++|++|++|++|+|++|++.+..| ..+..+..|+++++++|.+.+.+|..|+++++|+.+++++|.
T Consensus        82 ~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~-~~~~~~~~L~~l~l~~N~~~~~~p~~l~~l~~L~~l~l~~n~  160 (313)
T d1ogqa_          82 YIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIP-DFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNR  160 (313)
T ss_dssp             EEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECC-GGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSC
T ss_pred             ccccccccccccccccccccccchhhhcccccccccc-ccccchhhhcccccccccccccCchhhccCcccceeeccccc
Confidence            9997 89999999999999999999999999996544 556889999999999999999999999999999999999999


Q ss_pred             ccccCCccccCCCCCccEEEcccccccccCCCCCCCccccCCCCccEEEecCCcccCccccccccCCcceeEEeeccccc
Q 048430          154 LSGSFPTDLCTRLPSLVQLRLLGNNITGRIPNREIPNEIGNLHNLKILDLGGNNIAGLIPSMIFNNSNMVAILLYGNHLS  233 (973)
Q Consensus       154 l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~l~~n~l~  233 (973)
                      +.|.+|..++.....++.+++++|+++|.     .|..++++.. ..+++++|...+.+|..+..+++++.+++++|.+.
T Consensus       161 l~~~ip~~~~~l~~l~~~l~~~~n~l~~~-----~~~~~~~l~~-~~l~l~~~~~~~~~~~~~~~~~~l~~l~~~~~~l~  234 (313)
T d1ogqa_         161 ISGAIPDSYGSFSKLFTSMTISRNRLTGK-----IPPTFANLNL-AFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLA  234 (313)
T ss_dssp             CEEECCGGGGCCCTTCCEEECCSSEEEEE-----CCGGGGGCCC-SEEECCSSEEEECCGGGCCTTSCCSEEECCSSEEC
T ss_pred             ccccccccccccccccccccccccccccc-----cccccccccc-ccccccccccccccccccccccccccccccccccc
Confidence            99999988764444459999999999975     4567777754 47999999999999999999999999999999999


Q ss_pred             ccCCCCCCccccceeeeccccccccCcchhcccCcccEEEeccccccccCCCcccccccceEEEccCCcC
Q 048430          234 GHLPSSIYLPNLENLFLWKNNLSGIIPDSICNASEATILELSSNLFSGLVPNTFGNCRQLQILSLGDNQL  303 (973)
Q Consensus       234 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l  303 (973)
                      +.++....+++|++|+|++|+++|.+|+.|+.+++|++|+|++|+|+|.+|. ++++++|+.+++++|+.
T Consensus       235 ~~~~~~~~~~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~Ls~N~l~g~iP~-~~~L~~L~~l~l~~N~~  303 (313)
T d1ogqa_         235 FDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQ-GGNLQRFDVSAYANNKC  303 (313)
T ss_dssp             CBGGGCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCC-STTGGGSCGGGTCSSSE
T ss_pred             ccccccccccccccccCccCeecccCChHHhCCCCCCEEECcCCcccccCCC-cccCCCCCHHHhCCCcc
Confidence            9888877899999999999999999999999999999999999999988874 67889999999999874


No 55 
>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.5e-40  Score=359.04  Aligned_cols=272  Identities=18%  Similarity=0.222  Sum_probs=207.4

Q ss_pred             cCCCCCccccccCceEEEEEEe-CCCeEEEEEEEeccc--hhhHHHHHHHHHHHHhccCCceeEEEeeeecCCeeEEEEE
Q 048430          680 NGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQE--DRALKSFDTECEVMRRIRHRNLIKIVSSCSNPGFKALIMQ  756 (973)
Q Consensus       680 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  756 (973)
                      ++|+..+.||+|+||+||+|+. .+++.||||+++...  +...+.+.+|+.+++.++||||+++++++.++...++|+|
T Consensus         2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~~   81 (292)
T d1unla_           2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE   81 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEEee
Confidence            5788999999999999999995 578999999986543  3446789999999999999999999999999999999999


Q ss_pred             ecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCCCCCc
Q 048430          757 YMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDGVDPV  836 (973)
Q Consensus       757 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~  836 (973)
                      ++.++++..++...+ .+++..+..++.|++.||+|||   +++||||||||+|||++.++.+||+|||.|+...... .
T Consensus        82 ~~~~~~l~~~~~~~~-~~~~~~~~~~~~q~~~aL~~lH---~~~IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~~-~  156 (292)
T d1unla_          82 FCDQDLKKYFDSCNG-DLDPEIVKSFLFQLLKGLGFCH---SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPV-R  156 (292)
T ss_dssp             CCSEEHHHHHHHTTT-CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSCC-S
T ss_pred             ecccccccccccccc-ccchhHHHHHHHHHHHHHHHhh---cCCEeeecccCcccccccCCceeeeecchhhcccCCC-c
Confidence            999988888777654 7899999999999999999999   7999999999999999999999999999998765332 2


Q ss_pred             ccccccccccccCccCCCCC-CCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCC---cch---hhhccc
Q 048430          837 TQTMTLATIGYMAPEYGSEG-IVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLP---GAV---TEVVDA  909 (973)
Q Consensus       837 ~~~~~~~~~~y~aPE~~~~~-~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~---~~~---~~~~d~  909 (973)
                      ......+++.|+|||.+... .++.++||||+||++|||++|+.||...................   ...   ....+.
T Consensus       157 ~~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (292)
T d1unla_         157 CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDY  236 (292)
T ss_dssp             CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTC
T ss_pred             cceeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhhhhhhhcccc
Confidence            33344678899999977655 46999999999999999999999974322211112211111111   000   011110


Q ss_pred             ccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430          910 NLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD  957 (973)
Q Consensus       910 ~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~  957 (973)
                      .-... ..............++++.+++.+|++.||++|||++|+++|
T Consensus       237 ~~~~~-~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~H  283 (292)
T d1unla_         237 KPYPM-YPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH  283 (292)
T ss_dssp             CCCCC-CCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred             ccccc-ccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            00000 000001111122345678899999999999999999999876


No 56 
>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.2e-40  Score=367.11  Aligned_cols=273  Identities=24%  Similarity=0.254  Sum_probs=197.8

Q ss_pred             hcCCCCCccccccCceEEEEEEe-CCCeEEEEEEEeccc-hhhHHHHHHHHHHHHhccCCceeEEEeeeecCC----eeE
Q 048430          679 TNGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQE-DRALKSFDTECEVMRRIRHRNLIKIVSSCSNPG----FKA  752 (973)
Q Consensus       679 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----~~~  752 (973)
                      .++|...++||+|+||+||+|+. .+|+.||||+++... ....+.+.+|+.+|++++||||+++++++....    ..+
T Consensus         7 ~~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~   86 (345)
T d1pmea_           7 GPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV   86 (345)
T ss_dssp             CTTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred             CCCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccceE
Confidence            35688899999999999999985 589999999996543 344678999999999999999999999986543    234


Q ss_pred             EEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccccCC
Q 048430          753 LIMQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLLDG  832 (973)
Q Consensus       753 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~  832 (973)
                      ++++++.+|+|.+++...  .+++..++.++.|++.||+|||   +++||||||||+|||++.++.+||+|||+|.....
T Consensus        87 ~l~~~~~~g~L~~~l~~~--~l~~~~i~~i~~qil~al~yLH---~~~iiHRDIKp~NILl~~~~~~kl~DfG~a~~~~~  161 (345)
T d1pmea_          87 YLVTHLMGADLYKLLKTQ--HLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADP  161 (345)
T ss_dssp             EEEEECCCEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECCG
T ss_pred             EEEEeecCCchhhhhhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCcceEEECCCCCEEEcccCceeeccC
Confidence            555667799999999875  5999999999999999999999   79999999999999999999999999999986543


Q ss_pred             CCC--cccccccccccccCccCCCC-CCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhcc-
Q 048430          833 VDP--VTQTMTLATIGYMAPEYGSE-GIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVD-  908 (973)
Q Consensus       833 ~~~--~~~~~~~~~~~y~aPE~~~~-~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d-  908 (973)
                      ...  ......+||+.|+|||.+.. ..++.++||||+||++|||++|+.||......+. .................. 
T Consensus       162 ~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~  240 (345)
T d1pmea_         162 DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ-LNHILGILGSPSQEDLNCI  240 (345)
T ss_dssp             GGCBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHHCSCCHHHHHTC
T ss_pred             CCccceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHH-HHHHhhhccCCChhhhhhh
Confidence            221  12344579999999998744 5678999999999999999999999965332211 111111111000000000 


Q ss_pred             ------cccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430          909 ------ANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD  957 (973)
Q Consensus       909 ------~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~  957 (973)
                            .....................+.++.+++.+|++.||++|||++|+++|
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~h  295 (345)
T d1pmea_         241 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH  295 (345)
T ss_dssp             CCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             hhhhhhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence                  0000000000000000111234578999999999999999999999987


No 57 
>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=4.8e-41  Score=365.06  Aligned_cols=253  Identities=23%  Similarity=0.284  Sum_probs=204.1

Q ss_pred             cCCCCCccccccCceEEEEEEe----CCCeEEEEEEEecc----chhhHHHHHHHHHHHHhccC-CceeEEEeeeecCCe
Q 048430          680 NGFGESNLLGSGSFDNVYKATL----ANGVSVAVKVFNLQ----EDRALKSFDTECEVMRRIRH-RNLIKIVSSCSNPGF  750 (973)
Q Consensus       680 ~~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~----~~~~~~~~~~e~~~l~~l~h-~niv~l~~~~~~~~~  750 (973)
                      ++|...++||+|+||+||+|+.    .+|+.||||+++..    .....+.+.+|++++++++| |||+++++++.+...
T Consensus        24 ~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~~  103 (322)
T d1vzoa_          24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK  103 (322)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred             hceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCCc
Confidence            5688999999999999999984    25899999998543    22335678899999999976 899999999999999


Q ss_pred             eEEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeeccccccc
Q 048430          751 KALIMQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLL  830 (973)
Q Consensus       751 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~  830 (973)
                      .++||||+.+|+|.+++...+ .+++..+..++.|++.|++|+|   +.+||||||||+||+++.++.+||+|||+++..
T Consensus       104 ~~~v~e~~~~~~L~~~i~~~~-~~~e~~~~~~~~Qi~~al~~lH---~~~ivHrDiKp~Nill~~~~~vkL~DFG~a~~~  179 (322)
T d1vzoa_         104 LHLILDYINGGELFTHLSQRE-RFTEHEVQIYVGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEF  179 (322)
T ss_dssp             EEEEECCCCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEESCSSEEEEC
T ss_pred             eeeeeecccccHHHHHHHhcc-cccHHHHHHHHHHHHHHHHHhh---cCCEEeccCCccceeecCCCCEEEeeccchhhh
Confidence            999999999999999998776 6788999999999999999999   799999999999999999999999999999876


Q ss_pred             CCCCCcccccccccccccCccCCCCC--CCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCcchhhhcc
Q 048430          831 DGVDPVTQTMTLATIGYMAPEYGSEG--IVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPGAVTEVVD  908 (973)
Q Consensus       831 ~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d  908 (973)
                      ............|++.|+|||.....  .++.++||||+||++|||++|+.||......+. .........        .
T Consensus       180 ~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~-~~~i~~~~~--------~  250 (322)
T d1vzoa_         180 VADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNS-QAEISRRIL--------K  250 (322)
T ss_dssp             CGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCC-HHHHHHHHH--------H
T ss_pred             cccccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHhcc--------c
Confidence            54444444556799999999977543  478899999999999999999999976433322 111111110        0


Q ss_pred             cccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCC-----CHHHHHHH
Q 048430          909 ANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERI-----NVKDALAD  957 (973)
Q Consensus       909 ~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rp-----t~~evl~~  957 (973)
                      ...            ..+..+++++.+++.+||++||++||     |++|+++|
T Consensus       251 ~~~------------~~~~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~H  292 (322)
T d1vzoa_         251 SEP------------PYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH  292 (322)
T ss_dssp             CCC------------CCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred             CCC------------CCcccCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHcC
Confidence            000            01123567799999999999999999     58899875


No 58 
>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.8e-40  Score=364.91  Aligned_cols=267  Identities=23%  Similarity=0.255  Sum_probs=193.7

Q ss_pred             CCCCCccccccCceEEEEEEe-CCCeEEEEEEEeccchhhHHHHHHHHHHHHhccCCceeEEEeeeec------CCeeEE
Q 048430          681 GFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQEDRALKSFDTECEVMRRIRHRNLIKIVSSCSN------PGFKAL  753 (973)
Q Consensus       681 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~------~~~~~l  753 (973)
                      +|...++||+|+||+||+|+. .+|+.||||+++....    ...+|++++++++||||++++++|..      ..+.++
T Consensus        21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~----~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~l   96 (350)
T d1q5ka_          21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL   96 (350)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS----SCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEE
T ss_pred             CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccch----HHHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEE
Confidence            577788999999999999996 4799999999875432    23479999999999999999999843      345789


Q ss_pred             EEEecCCCCHHHHhh--hCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCC-cEEEeeccccccc
Q 048430          754 IMQYMPQGSLEKWLY--SHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDM-VAHLGDFGIAKLL  830 (973)
Q Consensus       754 v~e~~~~gsL~~~l~--~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~-~~kl~Dfgla~~~  830 (973)
                      |||||+++.+..+..  .....+++.+++.++.||+.||+|||   +++|+||||||+|||++.++ .+||+|||+++..
T Consensus        97 v~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH---~~~IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~  173 (350)
T d1q5ka_          97 VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL  173 (350)
T ss_dssp             EEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECTTTCCEEECCCTTCEEC
T ss_pred             EEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHH---hcCCcccCCCcceEEEecCCCceeEecccchhhc
Confidence            999998754333322  23457999999999999999999999   89999999999999999775 8999999999876


Q ss_pred             CCCCCcccccccccccccCccCCC-CCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCCc--chhhhc
Q 048430          831 DGVDPVTQTMTLATIGYMAPEYGS-EGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLPG--AVTEVV  907 (973)
Q Consensus       831 ~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~  907 (973)
                      ....  ......|++.|+|||.+. ...++.++||||+||++|||++|+.||...... ..+...+......  ......
T Consensus       174 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~-~~l~~i~~~~g~~~~~~~~~~  250 (350)
T d1q5ka_         174 VRGE--PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV-DQLVEIIKVLGTPTREQIREM  250 (350)
T ss_dssp             CTTS--CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHH-HHHHHHHHHHCCCCHHHHHHH
T ss_pred             cCCc--ccccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHH-HHHHHHHHHhCCChHHhhhhh
Confidence            4322  233457999999999765 457899999999999999999999999653221 1122222111110  000000


Q ss_pred             ccccCCCCchh---hhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430          908 DANLLSREDEE---DADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD  957 (973)
Q Consensus       908 d~~l~~~~~~~---~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~  957 (973)
                      .+.........   ...........++++.+|+.+||+.||++|||++|+++|
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H  303 (350)
T d1q5ka_         251 NPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH  303 (350)
T ss_dssp             CC---CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             ccchhhccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            11100000000   000000112345678999999999999999999999986


No 59 
>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}
Probab=100.00  E-value=5.6e-40  Score=360.00  Aligned_cols=264  Identities=19%  Similarity=0.279  Sum_probs=198.4

Q ss_pred             cCCCCCccccccCceEEEEEEe-CCCeEEEEEEEeccchhhHHHHHHHHHHHHhcc-CCceeEEEeeeec--CCeeEEEE
Q 048430          680 NGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQEDRALKSFDTECEVMRRIR-HRNLIKIVSSCSN--PGFKALIM  755 (973)
Q Consensus       680 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~--~~~~~lv~  755 (973)
                      ++|...++||+|+||+||+|+. .+|+.||||+++...   .+.+.+|+.+|++++ ||||+++++++..  ....++||
T Consensus        35 d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~~---~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v~  111 (328)
T d3bqca1          35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF  111 (328)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSSC---HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEEE
T ss_pred             cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHHH---HHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeEEE
Confidence            5788999999999999999995 579999999986443   367889999999995 9999999999864  46789999


Q ss_pred             EecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCC-cEEEeecccccccCCCC
Q 048430          756 QYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDM-VAHLGDFGIAKLLDGVD  834 (973)
Q Consensus       756 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~-~~kl~Dfgla~~~~~~~  834 (973)
                      ||+.+++|..+.+    .+++.+++.++.||+.||+|||   +++||||||||+|||++.++ .+||+|||+|+......
T Consensus       112 e~~~~~~L~~~~~----~l~e~~i~~i~~qil~aL~~LH---~~gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~~~  184 (328)
T d3bqca1         112 EHVNNTDFKQLYQ----TLTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ  184 (328)
T ss_dssp             ECCCSCBGGGTTT----SCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEECCGGGCEECCTTC
T ss_pred             eecCCCcHHHHhc----CCCHHHHHHHHHHHHHHHHHHh---hcccccccccccceEEcCCCCeeeecccccceeccCCC
Confidence            9999999977643    5899999999999999999999   89999999999999998655 69999999998765322


Q ss_pred             CcccccccccccccCccCCCCC-CCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHH------------hhCCc
Q 048430          835 PVTQTMTLATIGYMAPEYGSEG-IVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVA------------ESLPG  901 (973)
Q Consensus       835 ~~~~~~~~~~~~y~aPE~~~~~-~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~------------~~~~~  901 (973)
                        ......+|+.|+|||..... .++.++||||+||++|||++|+.||...............            .....
T Consensus       185 --~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~  262 (328)
T d3bqca1         185 --EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE  262 (328)
T ss_dssp             --CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCC
T ss_pred             --cccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhcccc
Confidence              23445789999999986654 5799999999999999999999998653221111111110            00000


Q ss_pred             c---hhhhcccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430          902 A---VTEVVDANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD  957 (973)
Q Consensus       902 ~---~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~  957 (973)
                      .   .........  ...............+++++.+|+.+|++.||++|||++|+++|
T Consensus       263 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~H  319 (328)
T d3bqca1         263 LDPRFNDILGRHS--RKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH  319 (328)
T ss_dssp             CCGGGGGTCCCCC--CCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             cCcccchhccccc--ccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            0   000000000  00000011111222356778999999999999999999999975


No 60 
>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=7.3e-40  Score=361.76  Aligned_cols=265  Identities=23%  Similarity=0.275  Sum_probs=196.3

Q ss_pred             hcCCCCCccccccCceEEEEEEe-CCCeEEEEEEEecc--chhhHHHHHHHHHHHHhccCCceeEEEeeeecCC------
Q 048430          679 TNGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQ--EDRALKSFDTECEVMRRIRHRNLIKIVSSCSNPG------  749 (973)
Q Consensus       679 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------  749 (973)
                      .++|...+.||+|+||+||+|+. .+|+.||||+++..  .+...+.+.+|+++|++++|||||+++++|...+      
T Consensus        17 ~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~~   96 (346)
T d1cm8a_          17 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT   96 (346)
T ss_dssp             BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred             CCcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccccccc
Confidence            46788899999999999999995 57999999998753  2344578899999999999999999999997654      


Q ss_pred             eeEEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecccccc
Q 048430          750 FKALIMQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKL  829 (973)
Q Consensus       750 ~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~  829 (973)
                      +.|+||||+ +.+|..+.+..  .+++..++.++.||+.||+|||   +++||||||||+|||++.++.+|++|||.|+.
T Consensus        97 ~~~lv~e~~-~~~l~~~~~~~--~l~~~~~~~~~~qi~~aL~~LH---~~~IiHrDiKp~NIL~~~~~~~kl~Dfg~a~~  170 (346)
T d1cm8a_          97 DFYLVMPFM-GTDLGKLMKHE--KLGEDRIQFLVYQMLKGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLARQ  170 (346)
T ss_dssp             CCEEEEECC-SEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred             eEEEEEecc-cccHHHHHHhc--cccHHHHHHHHHHHHHHHHHHH---hCCCcccccCcchhhcccccccccccccceec
Confidence            579999999 56888887664  5999999999999999999999   89999999999999999999999999999987


Q ss_pred             cCCCCCcccccccccccccCccCCCC-CCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhC--Ccchhhh
Q 048430          830 LDGVDPVTQTMTLATIGYMAPEYGSE-GIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESL--PGAVTEV  906 (973)
Q Consensus       830 ~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~  906 (973)
                      ...    ..+...||+.|+|||.+.+ ..++.++||||+||++|||++|+.||..... ...+........  +......
T Consensus       171 ~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~  245 (346)
T d1cm8a_         171 ADS----EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDH-LDQLKEIMKVTGTPPAEFVQR  245 (346)
T ss_dssp             CCS----SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHHHCCCCHHHHHT
T ss_pred             cCC----ccccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCCh-HHHHHHHHhccCCCcHHHHhh
Confidence            643    2244579999999998765 4679999999999999999999999865321 111111111111  1000000


Q ss_pred             --------cccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430          907 --------VDANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD  957 (973)
Q Consensus       907 --------~d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~  957 (973)
                              ....+........   .......++++.+|+.+||+.||++|||++|+++|
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~H  301 (346)
T d1cm8a_         246 LQSDEAKNYMKGLPELEKKDF---ASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH  301 (346)
T ss_dssp             CSCHHHHHHHHHSCCCCCCCG---GGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             hcchhhhhhhccCCcccccch---HHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence                    0000100000000   00112345678899999999999999999999987


No 61 
>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.4e-39  Score=358.23  Aligned_cols=268  Identities=23%  Similarity=0.189  Sum_probs=193.0

Q ss_pred             cCCCCCccccccCceEEEEEEeC-CCeEEEEEEEeccc--hhhHHHHHHHHHHHHhccCCceeEEEeeeec------CCe
Q 048430          680 NGFGESNLLGSGSFDNVYKATLA-NGVSVAVKVFNLQE--DRALKSFDTECEVMRRIRHRNLIKIVSSCSN------PGF  750 (973)
Q Consensus       680 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~------~~~  750 (973)
                      ++|.+.++||+|+||+||+|+.. +|+.||||++....  ....+.+.+|+.++++++||||++++++|..      ..+
T Consensus        17 ~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~~   96 (355)
T d2b1pa1          17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQD   96 (355)
T ss_dssp             TTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCE
T ss_pred             CCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCce
Confidence            67889999999999999999964 79999999997542  3445678999999999999999999999853      468


Q ss_pred             eEEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeeccccccc
Q 048430          751 KALIMQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLL  830 (973)
Q Consensus       751 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~  830 (973)
                      .|+||||+.++ +.+.+..   .+++..++.++.||+.||+|||   +.+|+||||||+|||++.++.+|++|||+++..
T Consensus        97 ~~iv~Ey~~~~-l~~~~~~---~~~~~~i~~~~~qil~gl~~LH---~~giiHrDlKP~Nil~~~~~~~kl~df~~~~~~  169 (355)
T d2b1pa1          97 VYLVMELMDAN-LCQVIQM---ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA  169 (355)
T ss_dssp             EEEEEECCSEE-HHHHHTS---CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCCCC----
T ss_pred             eEEEEeccchH-HHHhhhc---CCCHHHHHHHHHHHHHHHHHhh---hcccccccCCccccccccccceeeechhhhhcc
Confidence            89999999765 4444432   5899999999999999999999   799999999999999999999999999998865


Q ss_pred             CCCCCcccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCC----------
Q 048430          831 DGVDPVTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLP----------  900 (973)
Q Consensus       831 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~----------  900 (973)
                      ..  ........+|+.|+|||.+.+..++.++||||+||+++||++|+.||.+.... ......+.....          
T Consensus       170 ~~--~~~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~-~~~~~i~~~~~~~~~~~~~~~~  246 (355)
T d2b1pa1         170 GT--SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYI-DQWNKVIEQLGTPCPEFMKKLQ  246 (355)
T ss_dssp             -------------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCCCCHHHHTTSC
T ss_pred             cc--ccccccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHH-HHHHHHHHhccCCCHHHHHHhh
Confidence            42  22334557899999999999999999999999999999999999998643211 111111111110          


Q ss_pred             cchhhhcccccCCCCc--------hhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430          901 GAVTEVVDANLLSRED--------EEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD  957 (973)
Q Consensus       901 ~~~~~~~d~~l~~~~~--------~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~  957 (973)
                      .......+........        .............++++.+|+.+|++.||++|||++|+++|
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~H  311 (355)
T d2b1pa1         247 PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH  311 (355)
T ss_dssp             HHHHHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             hhHHHHhhcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence            0011111111000000        00011112234567889999999999999999999999977


No 62 
>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=4.3e-39  Score=356.41  Aligned_cols=266  Identities=23%  Similarity=0.228  Sum_probs=196.8

Q ss_pred             hcCCCCCccccccCceEEEEEEe-CCCeEEEEEEEeccc--hhhHHHHHHHHHHHHhccCCceeEEEeeeec-----CCe
Q 048430          679 TNGFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQE--DRALKSFDTECEVMRRIRHRNLIKIVSSCSN-----PGF  750 (973)
Q Consensus       679 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-----~~~  750 (973)
                      .++|...++||+|+||+||+|+. .+|+.||||+++...  ....+.+.+|++++++++||||+++++++..     ...
T Consensus        17 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~   96 (348)
T d2gfsa1          17 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN   96 (348)
T ss_dssp             ETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCC
T ss_pred             CCCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccCc
Confidence            46799999999999999999985 579999999987542  3345678899999999999999999999853     334


Q ss_pred             eEEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeeccccccc
Q 048430          751 KALIMQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKLL  830 (973)
Q Consensus       751 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~  830 (973)
                      .++|+||+.+|+|.+++...  .+++.+++.++.||+.||+|||   +++|+||||||+|||++.++.+|++|||.+...
T Consensus        97 ~~~i~~~~~gg~L~~~~~~~--~l~e~~~~~i~~qil~aL~~LH---~~giiHrDiKp~NILi~~~~~~kl~dfg~a~~~  171 (348)
T d2gfsa1          97 DVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHT  171 (348)
T ss_dssp             CCEEEEECCSEEHHHHHTTC--CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECCC----CC
T ss_pred             eEEEEEeecCCchhhhcccc--cccHHHHHHHHHHHHHHHHHHH---hCCCcccccCCccccccccccccccccchhccc
Confidence            46777888899999999764  5999999999999999999999   799999999999999999999999999998754


Q ss_pred             CCCCCcccccccccccccCccCCCC-CCCCcchhHHHHHHHHHHHHhCCCCCCccccCcccHHHHHHhhCC--cchhhh-
Q 048430          831 DGVDPVTQTMTLATIGYMAPEYGSE-GIVSISGDVYSFGILMMETFTRRKPTNEMFTGEMSLKQWVAESLP--GAVTEV-  906 (973)
Q Consensus       831 ~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~-  906 (973)
                      .    .......|++.|+|||.... ..++.++||||+||++|||++|+.||.+..... ...........  ...... 
T Consensus       172 ~----~~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~-~~~~i~~~~~~~~~~~~~~~  246 (348)
T d2gfsa1         172 D----DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID-QLKLILRLVGTPGAELLKKI  246 (348)
T ss_dssp             T----GGGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCHHHHTTC
T ss_pred             C----cccccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHH-HHHHHHHhcCCCChHHhhhc
Confidence            3    23344578999999997555 457899999999999999999999996532111 11111111110  000000 


Q ss_pred             -------cccccCCCCchhhhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 048430          907 -------VDANLLSREDEEDADDFATKKTCISYIMSLALKCSAEIPEERINVKDALAD  957 (973)
Q Consensus       907 -------~d~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl~~  957 (973)
                             ...........   .........++++.+|+.+|++.||++|||++|+++|
T Consensus       247 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~H  301 (348)
T d2gfsa1         247 SSESARNYIQSLTQMPKM---NFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH  301 (348)
T ss_dssp             CCHHHHHHHTTSCCCCCC---CHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             cchhhhhhhhhcccCCCc---chhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhcC
Confidence                   00000000000   0001112345678999999999999999999999986


No 63 
>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00  E-value=1.5e-34  Score=321.91  Aligned_cols=270  Identities=18%  Similarity=0.198  Sum_probs=191.1

Q ss_pred             CCCCCccccccCceEEEEEEe-CCCeEEEEEEEeccchhhHHHHHHHHHHHHhcc-----------CCceeEEEeeeec-
Q 048430          681 GFGESNLLGSGSFDNVYKATL-ANGVSVAVKVFNLQEDRALKSFDTECEVMRRIR-----------HRNLIKIVSSCSN-  747 (973)
Q Consensus       681 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-----------h~niv~l~~~~~~-  747 (973)
                      +|...++||+|+||+||+|+. .+|+.||||+++... ...+.+.+|+.+++.++           |+||+++++++.. 
T Consensus        14 rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~-~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~~   92 (362)
T d1q8ya_          14 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHK   92 (362)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEE
T ss_pred             cEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeccc-cchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeeec
Confidence            488899999999999999995 579999999997543 23467788999888875           5789999988754 


Q ss_pred             -CCeeEEEEEecCCCCH-HHH-hhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCC------c
Q 048430          748 -PGFKALIMQYMPQGSL-EKW-LYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDM------V  818 (973)
Q Consensus       748 -~~~~~lv~e~~~~gsL-~~~-l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~------~  818 (973)
                       ....++|++++..+.. ... .......+++..+..++.||+.|++|||+  ..+|+||||||+|||++.++      .
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~--~~~IvHrDlKp~NIll~~~~~~~~~~~  170 (362)
T d1q8ya_          93 GPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHR--RCGIIHTDIKPENVLMEIVDSPENLIQ  170 (362)
T ss_dssp             ETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHH--TTCEECSCCSGGGEEEEEEETTTTEEE
T ss_pred             cccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhh--hcCcccccCChhHeeeeccCcccccce
Confidence             4566677777655432 222 22333578999999999999999999994  48899999999999998665      3


Q ss_pred             EEEeecccccccCCCCCcccccccccccccCccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccCc-----ccHHH
Q 048430          819 AHLGDFGIAKLLDGVDPVTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILMMETFTRRKPTNEMFTGE-----MSLKQ  893 (973)
Q Consensus       819 ~kl~Dfgla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl~elltg~~p~~~~~~~~-----~~~~~  893 (973)
                      ++++|||.+.....    .....+||+.|+|||......++.++||||+||+++||++|+.||.......     ..+..
T Consensus       171 ~kl~dfg~s~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~~  246 (362)
T d1q8ya_         171 IKIADLGNACWYDE----HYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQ  246 (362)
T ss_dssp             EEECCCTTCEETTB----CCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHH
T ss_pred             eeEeeccccccccc----ccccccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCCCCccccccchhHHHHH
Confidence            99999999876432    2234579999999999888899999999999999999999999986532211     11111


Q ss_pred             HHHhhC--Ccch-------hhhcccc-----cCCCCchh----hhhhHHhHHHHHHHHHHHHHhccccCCCCCCCHHHHH
Q 048430          894 WVAESL--PGAV-------TEVVDAN-----LLSREDEE----DADDFATKKTCISYIMSLALKCSAEIPEERINVKDAL  955 (973)
Q Consensus       894 ~~~~~~--~~~~-------~~~~d~~-----l~~~~~~~----~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~evl  955 (973)
                      .+....  +...       ....+..     ........    ...........++++.+|+.+|++.||++|||++|++
T Consensus       247 ~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L  326 (362)
T d1q8ya_         247 IIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLV  326 (362)
T ss_dssp             HHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHH
T ss_pred             HHHHhCCCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHHHh
Confidence            111111  1100       0011100     00000000    0011122345678899999999999999999999999


Q ss_pred             HH
Q 048430          956 AD  957 (973)
Q Consensus       956 ~~  957 (973)
                      +|
T Consensus       327 ~H  328 (362)
T d1q8ya_         327 NH  328 (362)
T ss_dssp             TC
T ss_pred             cC
Confidence            86


No 64 
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.97  E-value=1.9e-32  Score=298.11  Aligned_cols=244  Identities=34%  Similarity=0.558  Sum_probs=227.6

Q ss_pred             cCCCCCCCCCcccEEEeec-CccccccCcccCCCCCCCEEEccCCcCCCCCchhhhccCcCCeeecCCccccCcCccccc
Q 048430          362 GIPVGFGNLSNLLVLSLVN-NELAGAIPTVLGKLQKLQGLDLNSNKLKGFIPTDLCKLEKLNTLLSNNNALQGQIPTCLA  440 (973)
Q Consensus       362 ~~p~~~~~l~~L~~L~Ls~-n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~  440 (973)
                      .+|..++++++|++|+|++ |+++|.+|..|+++++|++|+|++|++.+..+..+..+.+|+.+++++|.+.+.+|..+.
T Consensus        67 ~lp~~l~~L~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~l~~N~~~~~~p~~l~  146 (313)
T d1ogqa_          67 PIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSIS  146 (313)
T ss_dssp             ECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGG
T ss_pred             CCChHHhcCccccccccccccccccccccccccccccchhhhccccccccccccccchhhhcccccccccccccCchhhc
Confidence            3677788999999999997 899999999999999999999999999999999999999999999999999999999999


Q ss_pred             CcCCCCeeeccCCCCCCCCcccccccccc-cEEEecCCcccCCcCcCccCCCCCCeEEccCCcCcccCCcccccCCcCCE
Q 048430          441 NLTSLRHLDFRSNSLNSTIPSTFWSLKYI-LAVDFSLNSLSGSLPLNIGNLEALGGLNLTGNQLSGYIPSSIGNLKNLDW  519 (973)
Q Consensus       441 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L-~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~  519 (973)
                      +++.|+.+++++|.+.+.+|..+..+..+ +.++++.|++++..|..+..+..+ .+++++|.+.+.+|..++.+++|+.
T Consensus       147 ~l~~L~~l~l~~n~l~~~ip~~~~~l~~l~~~l~~~~n~l~~~~~~~~~~l~~~-~l~l~~~~~~~~~~~~~~~~~~l~~  225 (313)
T d1ogqa_         147 SLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLA-FVDLSRNMLEGDASVLFGSDKNTQK  225 (313)
T ss_dssp             GCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCS-EEECCSSEEEECCGGGCCTTSCCSE
T ss_pred             cCcccceeeccccccccccccccccccccccccccccccccccccccccccccc-ccccccccccccccccccccccccc
Confidence            99999999999999999999999998886 889999999999999888887655 7999999999999999999999999


Q ss_pred             EEcccCccccCCCCCcccccccccccccccccCCCCCccccccccccccccCCCcccccCCCCCCCCccCccccccCccc
Q 048430          520 LALARNAFQGPIPQSFGSLISLQSLDLSGNNISGEIPKSLEKLSRLVDFNVSFNGLEGEIPSGGPFVNFTADSFKQNYAL  599 (973)
Q Consensus       520 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~~  599 (973)
                      |++++|.+.+.+| .++.+++|+.|+|++|+|+|.+|..|+++++|++|||++|+|+|.+|+.+.+.++....+.+|+.+
T Consensus       226 l~~~~~~l~~~~~-~~~~~~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~~~L~~L~~l~l~~N~~l  304 (313)
T d1ogqa_         226 IHLAKNSLAFDLG-KVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCL  304 (313)
T ss_dssp             EECCSSEECCBGG-GCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCSTTGGGSCGGGTCSSSEE
T ss_pred             ccccccccccccc-ccccccccccccCccCeecccCChHHhCCCCCCEEECcCCcccccCCCcccCCCCCHHHhCCCccc
Confidence            9999999997765 689999999999999999999999999999999999999999999999888999999999999999


Q ss_pred             ccCCccCCCCc
Q 048430          600 CGSSRLQVPPC  610 (973)
Q Consensus       600 c~~~~~~~~~c  610 (973)
                      ||.|   .|+|
T Consensus       305 ~g~p---lp~c  312 (313)
T d1ogqa_         305 CGSP---LPAC  312 (313)
T ss_dssp             ESTT---SSCC
T ss_pred             cCCC---CCCC
Confidence            9987   3566


No 65 
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.96  E-value=1.4e-28  Score=275.88  Aligned_cols=123  Identities=25%  Similarity=0.363  Sum_probs=59.8

Q ss_pred             CcCCCCeeeccCCCCCCCCcccccccccccEEEecCCcccCCcCcCccCCCCCCeEEccCCcCcccCCcccccCCcCCEE
Q 048430          441 NLTSLRHLDFRSNSLNSTIPSTFWSLKYILAVDFSLNSLSGSLPLNIGNLEALGGLNLTGNQLSGYIPSSIGNLKNLDWL  520 (973)
Q Consensus       441 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L  520 (973)
                      .+++|+.|++++|++++..  .+..+..++.++++.|++++ + ..+..+++++.|++++|++++..  .+..+++|+.|
T Consensus       261 ~~~~L~~L~l~~~~l~~~~--~~~~~~~l~~l~~~~n~l~~-~-~~~~~~~~l~~L~ls~n~l~~l~--~l~~l~~L~~L  334 (384)
T d2omza2         261 GLTKLTELKLGANQISNIS--PLAGLTALTNLELNENQLED-I-SPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL  334 (384)
T ss_dssp             TCTTCSEEECCSSCCCCCG--GGTTCTTCSEEECCSSCCSC-C-GGGGGCTTCSEEECCSSCCSCCG--GGGGCTTCCEE
T ss_pred             ccccCCEeeccCcccCCCC--cccccccccccccccccccc-c-cccchhcccCeEECCCCCCCCCc--ccccCCCCCEE
Confidence            3344444444444443321  13344444444444444442 1 12444555555555555555322  24555555555


Q ss_pred             EcccCccccCCCCCcccccccccccccccccCCCCCccccccccccccccCCC
Q 048430          521 ALARNAFQGPIPQSFGSLISLQSLDLSGNNISGEIPKSLEKLSRLVDFNVSFN  573 (973)
Q Consensus       521 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~ls~N  573 (973)
                      +|++|+|++ ++ .|+++++|++|+|++|+|++.+|  +.++++|+.|++++|
T Consensus       335 ~L~~n~l~~-l~-~l~~l~~L~~L~l~~N~l~~l~~--l~~l~~L~~L~L~~N  383 (384)
T d2omza2         335 FFANNKVSD-VS-SLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQ  383 (384)
T ss_dssp             ECCSSCCCC-CG-GGGGCTTCCEEECCSSCCCBCGG--GTTCTTCSEEECCCE
T ss_pred             ECCCCCCCC-Ch-hHcCCCCCCEEECCCCcCCCChh--hccCCCCCEeeCCCC
Confidence            555555552 22 35555555555555555554433  555555666665555


No 66 
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.96  E-value=1e-28  Score=277.04  Aligned_cols=357  Identities=26%  Similarity=0.385  Sum_probs=265.0

Q ss_pred             EEeeCcccCCCCCccccCCCCCCeEEccCccccccCCccccCCCCCccEEEcccccccccCCCCCCCccccCCCCccEEE
Q 048430          123 FDVSSNKITGEFPSAIVNISSLKSIRLDNNSLSGSFPTDLCTRLPSLVQLRLLGNNITGRIPNREIPNEIGNLHNLKILD  202 (973)
Q Consensus       123 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~p~~l~~l~~L~~L~  202 (973)
                      .+++.+.+++.++  ...+.+|++|++++|.|+ .++ + ++.+++|++|+|++|+|+      .+| .++++++|++|+
T Consensus        27 ~~l~~~~~~~~~~--~~~l~~l~~L~l~~~~I~-~l~-g-l~~L~nL~~L~Ls~N~l~------~l~-~l~~L~~L~~L~   94 (384)
T d2omza2          27 TVLGKTNVTDTVS--QTDLDQVTTLQADRLGIK-SID-G-VEYLNNLTQINFSNNQLT------DIT-PLKNLTKLVDIL   94 (384)
T ss_dssp             HHTTCSSTTSEEC--HHHHTTCCEEECCSSCCC-CCT-T-GGGCTTCCEEECCSSCCC------CCG-GGTTCTTCCEEE
T ss_pred             HHhCCCCCCCccC--HHHhCCCCEEECCCCCCC-Ccc-c-cccCCCCCEEeCcCCcCC------CCc-cccCCccccccc
Confidence            4566777776544  356778999999999988 553 3 357889999999999987      344 388899999999


Q ss_pred             ecCCcccCccccccccCCcceeEEeecccccccCCCCCCccccceeeeccccccccCcchhcccCcccEEEecccccccc
Q 048430          203 LGGNNIAGLIPSMIFNNSNMVAILLYGNHLSGHLPSSIYLPNLENLFLWKNNLSGIIPDSICNASEATILELSSNLFSGL  282 (973)
Q Consensus       203 L~~N~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~i~~~  282 (973)
                      +++|++.+..+  +..+++|+.|++++|.+++..+ ......+..+....|.+....+..................+   
T Consensus        95 L~~n~i~~i~~--l~~l~~L~~L~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~---  168 (384)
T d2omza2          95 MNNNQIADITP--LANLTNLTGLTLFNNQITDIDP-LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDL---  168 (384)
T ss_dssp             CCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG-GTTCTTCSEEEEEEEEECCCGGGTTCTTCSEEEEEESCCCC---
T ss_pred             ccccccccccc--cccccccccccccccccccccc-ccccccccccccccccccccccccccccccccccccccchh---
Confidence            99999986533  7777888888888887775443 23355667777777777654433333333333333322222   


Q ss_pred             CCCcccccccceEEEccCCcCCCCCCCcchhhhhhhccCCcCcEEEccCCCCCCCCCCcccccccccceeecccCCcccc
Q 048430          283 VPNTFGNCRQLQILSLGDNQLTTGSSAQGQIFYSSLAKCRYLRVLVLDTNPLKGVIPNSIGNLSTSLENFYAGSSQLSGG  362 (973)
Q Consensus       283 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~l~~l~l~~n~l~~~  362 (973)
                        ..+.............|....         ......+++++.+++++|.+++..|                       
T Consensus       169 --~~~~~~~~~~~~~~~~~~~~~---------~~~~~~l~~~~~l~l~~n~i~~~~~-----------------------  214 (384)
T d2omza2         169 --KPLANLTTLERLDISSNKVSD---------ISVLAKLTNLESLIATNNQISDITP-----------------------  214 (384)
T ss_dssp             --GGGTTCTTCCEEECCSSCCCC---------CGGGGGCTTCSEEECCSSCCCCCGG-----------------------
T ss_pred             --hhhcccccccccccccccccc---------ccccccccccceeeccCCccCCCCc-----------------------
Confidence              234445555556666665542         3345667777888888777765432                       


Q ss_pred             CCCCCCCCCcccEEEeecCccccccCcccCCCCCCCEEEccCCcCCCCCchhhhccCcCCeeecCCccccCcCcccccCc
Q 048430          363 IPVGFGNLSNLLVLSLVNNELAGAIPTVLGKLQKLQGLDLNSNKLKGFIPTDLCKLEKLNTLLSNNNALQGQIPTCLANL  442 (973)
Q Consensus       363 ~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l  442 (973)
                          +...++|+.|++++|.++. + ..+..+++|+.|++++|.+++..  .+..+++|+.|++++|++++..  .+..+
T Consensus       215 ----~~~~~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~l~~n~l~~~~--~~~~~~~L~~L~l~~~~l~~~~--~~~~~  284 (384)
T d2omza2         215 ----LGILTNLDELSLNGNQLKD-I-GTLASLTNLTDLDLANNQISNLA--PLSGLTKLTELKLGANQISNIS--PLAGL  284 (384)
T ss_dssp             ----GGGCTTCCEEECCSSCCCC-C-GGGGGCTTCSEEECCSSCCCCCG--GGTTCTTCSEEECCSSCCCCCG--GGTTC
T ss_pred             ----ccccCCCCEEECCCCCCCC-c-chhhcccccchhccccCccCCCC--cccccccCCEeeccCcccCCCC--ccccc
Confidence                3345789999999999984 3 46788999999999999999654  3788999999999999998654  36788


Q ss_pred             CCCCeeeccCCCCCCCCcccccccccccEEEecCCcccCCcCcCccCCCCCCeEEccCCcCcccCCcccccCCcCCEEEc
Q 048430          443 TSLRHLDFRSNSLNSTIPSTFWSLKYILAVDFSLNSLSGSLPLNIGNLEALGGLNLTGNQLSGYIPSSIGNLKNLDWLAL  522 (973)
Q Consensus       443 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L  522 (973)
                      +.++.++++.|.+.+  ...+..++.++.|++++|++++..  .+..+++|+.|++++|+|++ ++ .++++++|++|+|
T Consensus       285 ~~l~~l~~~~n~l~~--~~~~~~~~~l~~L~ls~n~l~~l~--~l~~l~~L~~L~L~~n~l~~-l~-~l~~l~~L~~L~l  358 (384)
T d2omza2         285 TALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRLFFANNKVSD-VS-SLANLTNINWLSA  358 (384)
T ss_dssp             TTCSEEECCSSCCSC--CGGGGGCTTCSEEECCSSCCSCCG--GGGGCTTCCEEECCSSCCCC-CG-GGGGCTTCCEEEC
T ss_pred             ccccccccccccccc--ccccchhcccCeEECCCCCCCCCc--ccccCCCCCEEECCCCCCCC-Ch-hHcCCCCCCEEEC
Confidence            899999999999875  345788899999999999999653  37889999999999999984 44 6899999999999


Q ss_pred             ccCccccCCCCCccccccccccccccc
Q 048430          523 ARNAFQGPIPQSFGSLISLQSLDLSGN  549 (973)
Q Consensus       523 s~N~l~~~~p~~~~~l~~L~~L~Ls~N  549 (973)
                      ++|+|++..|  +.++++|+.|+|++|
T Consensus       359 ~~N~l~~l~~--l~~l~~L~~L~L~~N  383 (384)
T d2omza2         359 GHNQISDLTP--LANLTRITQLGLNDQ  383 (384)
T ss_dssp             CSSCCCBCGG--GTTCTTCSEEECCCE
T ss_pred             CCCcCCCChh--hccCCCCCEeeCCCC
Confidence            9999997665  899999999999998


No 67 
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.95  E-value=4.5e-26  Score=246.43  Aligned_cols=253  Identities=21%  Similarity=0.338  Sum_probs=181.4

Q ss_pred             CCCCcceEEEEEeeCCCCcEEEEecCCCCCCCcCCCCCCCCCCCcEEEecCCCCCCCCCcccccccCCcEEEccCCCCCC
Q 048430           28 TSASVCNWVGVTCSIRHGRVAALSLPNLSLGGTLPPHVGNLSFLVSLNISGNSFYDTLPNELWHMRRLKIIDFSSNSLSG  107 (973)
Q Consensus        28 ~~~~~c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~  107 (973)
                      +..+-|.|.+|.|+.            .+|+ ++|+.+.  +.+++|+|++|++....+..|.++++|++|++++|.+. 
T Consensus         5 p~~c~c~~~~~~C~~------------~~L~-~lP~~l~--~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~-   68 (305)
T d1xkua_           5 PFRCQCHLRVVQCSD------------LGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKIS-   68 (305)
T ss_dssp             CTTCEEETTEEECTT------------SCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCC-
T ss_pred             CCCCEecCCEEEecC------------CCCC-ccCCCCC--CCCCEEECcCCcCCCcChhHhhcccccccccccccccc-
Confidence            345558899999964            3455 6777653  57888888888886544457888888888888888888 


Q ss_pred             CCCccccCCCCCccEEEeeCcccCCCCCccccCCCCCCeEEccCccccccCCccccCCCCCccEEEcccccccccCCCCC
Q 048430          108 SLPGDMCNSFTQLESFDVSSNKITGEFPSAIVNISSLKSIRLDNNSLSGSFPTDLCTRLPSLVQLRLLGNNITGRIPNRE  187 (973)
Q Consensus       108 ~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~  187 (973)
                      .+++..|..+++|++|++++|+++ .+|..+  ...|+.|++.+|.+. .++...+.....+..++...|......   .
T Consensus        69 ~i~~~~f~~l~~L~~L~l~~n~l~-~l~~~~--~~~l~~L~~~~n~l~-~l~~~~~~~~~~~~~l~~~~n~~~~~~---~  141 (305)
T d1xkua_          69 KISPGAFAPLVKLERLYLSKNQLK-ELPEKM--PKTLQELRVHENEIT-KVRKSVFNGLNQMIVVELGTNPLKSSG---I  141 (305)
T ss_dssp             CBCTTTTTTCTTCCEEECCSSCCS-BCCSSC--CTTCCEEECCSSCCC-BBCHHHHTTCTTCCEEECCSSCCCGGG---B
T ss_pred             ccchhhhhCCCccCEecccCCccC-cCccch--hhhhhhhhccccchh-hhhhhhhhccccccccccccccccccC---C
Confidence            566666778888888888888888 455543  357788888888887 667666677777777777777543221   2


Q ss_pred             CCccccCCCCccEEEecCCcccCccccccccCCcceeEEeecccccccCCCCCCccccceeeeccccccccCcchhcccC
Q 048430          188 IPNEIGNLHNLKILDLGGNNIAGLIPSMIFNNSNMVAILLYGNHLSGHLPSSIYLPNLENLFLWKNNLSGIIPDSICNAS  267 (973)
Q Consensus       188 ~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~  267 (973)
                      .+..+..+++|+++++++|.++. +|..+                         +++|++|++++|.+.+..+..+..++
T Consensus       142 ~~~~~~~l~~L~~l~l~~n~l~~-l~~~~-------------------------~~~L~~L~l~~n~~~~~~~~~~~~~~  195 (305)
T d1xkua_         142 ENGAFQGMKKLSYIRIADTNITT-IPQGL-------------------------PPSLTELHLDGNKITKVDAASLKGLN  195 (305)
T ss_dssp             CTTGGGGCTTCCEEECCSSCCCS-CCSSC-------------------------CTTCSEEECTTSCCCEECTGGGTTCT
T ss_pred             CccccccccccCccccccCCccc-cCccc-------------------------CCccCEEECCCCcCCCCChhHhhccc
Confidence            34566777777777777777663 23221                         56778888888888877777888888


Q ss_pred             cccEEEeccccccccCCCcccccccceEEEccCCcCCCCCCCcchhhhhhhccCCcCcEEEccCCCCCCC
Q 048430          268 EATILELSSNLFSGLVPNTFGNCRQLQILSLGDNQLTTGSSAQGQIFYSSLAKCRYLRVLVLDTNPLKGV  337 (973)
Q Consensus       268 ~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~  337 (973)
                      .+++|++++|.+.++.+..|.++++|++|+|++|+|++++        ..+.++++|++|+|++|+|+.+
T Consensus       196 ~l~~L~~s~n~l~~~~~~~~~~l~~L~~L~L~~N~L~~lp--------~~l~~l~~L~~L~Ls~N~i~~i  257 (305)
T d1xkua_         196 NLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVKVP--------GGLADHKYIQVVYLHNNNISAI  257 (305)
T ss_dssp             TCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCSSCC--------TTTTTCSSCCEEECCSSCCCCC
T ss_pred             cccccccccccccccccccccccccceeeecccccccccc--------cccccccCCCEEECCCCccCcc
Confidence            8888888888888887888888888888888888877643        2355666666666666666643


No 68 
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.94  E-value=2.1e-25  Score=241.05  Aligned_cols=223  Identities=23%  Similarity=0.295  Sum_probs=115.4

Q ss_pred             cccceeeeccccccccCcchhcccCcccEEEeccccccccCCCcccccccceEEEccCCcCCCCCCCcchhhhhhhccCC
Q 048430          243 PNLENLFLWKNNLSGIIPDSICNASEATILELSSNLFSGLVPNTFGNCRQLQILSLGDNQLTTGSSAQGQIFYSSLAKCR  322 (973)
Q Consensus       243 ~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~  322 (973)
                      +++++|+|++|+|+.+.+.+|.++++|++|++++|.+..+.|..|.++++|+.|++++|+++.++..          .  
T Consensus        31 ~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l~~n~l~~l~~~----------~--   98 (305)
T d1xkua_          31 PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLKELPEK----------M--   98 (305)
T ss_dssp             TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCSBCCSS----------C--
T ss_pred             CCCCEEECcCCcCCCcChhHhhccccccccccccccccccchhhhhCCCccCEecccCCccCcCccc----------h--
Confidence            5677777777777766556777777777777777777777777777777777777777777653321          0  


Q ss_pred             cCcEEEccCCCCCCCCCCcccccccccceeecccCCccccCCCCCCCCCcccEEEeecCccccccCcccCCCCCCCEEEc
Q 048430          323 YLRVLVLDTNPLKGVIPNSIGNLSTSLENFYAGSSQLSGGIPVGFGNLSNLLVLSLVNNELAGAIPTVLGKLQKLQGLDL  402 (973)
Q Consensus       323 ~L~~L~L~~N~l~~~~p~~~~~l~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L  402 (973)
                                                                     ...+..|++++|.+.+..+..+.....+..++.
T Consensus        99 -----------------------------------------------~~~l~~L~~~~n~l~~l~~~~~~~~~~~~~l~~  131 (305)
T d1xkua_          99 -----------------------------------------------PKTLQELRVHENEITKVRKSVFNGLNQMIVVEL  131 (305)
T ss_dssp             -----------------------------------------------CTTCCEEECCSSCCCBBCHHHHTTCTTCCEEEC
T ss_pred             -----------------------------------------------hhhhhhhhccccchhhhhhhhhhcccccccccc
Confidence                                                           123444444444444333334444444455555


Q ss_pred             cCCcCC--CCCchhhhccCcCCeeecCCccccCcCcccccCcCCCCeeeccCCCCCCCCcccccccccccEEEecCCccc
Q 048430          403 NSNKLK--GFIPTDLCKLEKLNTLLSNNNALQGQIPTCLANLTSLRHLDFRSNSLNSTIPSTFWSLKYILAVDFSLNSLS  480 (973)
Q Consensus       403 s~N~l~--~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~  480 (973)
                      ..|...  ...+..+..+++|+.+.+++|.+.. ++..  .+++|+.|++++|.+++..+..|..++.++.|++++|.++
T Consensus       132 ~~n~~~~~~~~~~~~~~l~~L~~l~l~~n~l~~-l~~~--~~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~s~n~l~  208 (305)
T d1xkua_         132 GTNPLKSSGIENGAFQGMKKLSYIRIADTNITT-IPQG--LPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSIS  208 (305)
T ss_dssp             CSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS-CCSS--CCTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCC
T ss_pred             ccccccccCCCccccccccccCccccccCCccc-cCcc--cCCccCEEECCCCcCCCCChhHhhcccccccccccccccc
Confidence            444332  1122334444444444444444432 2221  1234455555555444444444444444444444444444


Q ss_pred             CCcCcCccCCCCCCeEEccCCcCcccCCcccccCCcCCEEEcccCccc
Q 048430          481 GSLPLNIGNLEALGGLNLTGNQLSGYIPSSIGNLKNLDWLALARNAFQ  528 (973)
Q Consensus       481 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~  528 (973)
                      +..+..+.++++|++|+|++|+|+ .+|..|..+++|+.|+|++|+|+
T Consensus       209 ~~~~~~~~~l~~L~~L~L~~N~L~-~lp~~l~~l~~L~~L~Ls~N~i~  255 (305)
T d1xkua_         209 AVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNIS  255 (305)
T ss_dssp             EECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCC
T ss_pred             ccccccccccccceeeeccccccc-ccccccccccCCCEEECCCCccC
Confidence            333444444444444444444444 33444444444444444444444


No 69 
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.92  E-value=3.2e-25  Score=236.76  Aligned_cols=267  Identities=25%  Similarity=0.279  Sum_probs=175.2

Q ss_pred             eeeccccccccCcchhcccCcccEEEeccccccccCCCcccccccceEEEccCCcCCCCCCCcchhhhhhhccCCcCcEE
Q 048430          248 LFLWKNNLSGIIPDSICNASEATILELSSNLFSGLVPNTFGNCRQLQILSLGDNQLTTGSSAQGQIFYSSLAKCRYLRVL  327 (973)
Q Consensus       248 L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~L~~L  327 (973)
                      ++.++++++ .+|..+.  +.+++|+|++|+|+.+++..|.++++|++|++++|++..++.                   
T Consensus        16 v~c~~~~L~-~iP~~ip--~~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~-------------------   73 (284)
T d1ozna_          16 TSCPQQGLQ-AVPVGIP--AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDA-------------------   73 (284)
T ss_dssp             EECCSSCCS-SCCTTCC--TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECT-------------------
T ss_pred             EEcCCCCCC-ccCCCCC--CCCCEEECcCCcCCCCCHHHhhcccccccccccccccccccc-------------------
Confidence            455555565 3444332  456677777777776666667777777777776666654221                   


Q ss_pred             EccCCCCCCCCCCcccccccccceeecccCCccccCCCCCCCCCcccEEEee-cCccccccCcccCCCCCCCEEEccCCc
Q 048430          328 VLDTNPLKGVIPNSIGNLSTSLENFYAGSSQLSGGIPVGFGNLSNLLVLSLV-NNELAGAIPTVLGKLQKLQGLDLNSNK  406 (973)
Q Consensus       328 ~L~~N~l~~~~p~~~~~l~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls-~n~l~~~~p~~~~~l~~L~~L~Ls~N~  406 (973)
                                                           ..+..+..++.+... .|.++...+..|.++++|++|++++|.
T Consensus        74 -------------------------------------~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~l~~L~~L~l~~n~  116 (284)
T d1ozna_          74 -------------------------------------AAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCG  116 (284)
T ss_dssp             -------------------------------------TTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSC
T ss_pred             -------------------------------------ccccccccccccccccccccccccchhhcccccCCEEecCCcc
Confidence                                                 113333444444433 344444445566666666666666666


Q ss_pred             CCCCCchhhhccCcCCeeecCCccccCcCcccccCcCCCCeeeccCCCCCCCCcccccccccccEEEecCCcccCCcCcC
Q 048430          407 LKGFIPTDLCKLEKLNTLLSNNNALQGQIPTCLANLTSLRHLDFRSNSLNSTIPSTFWSLKYILAVDFSLNSLSGSLPLN  486 (973)
Q Consensus       407 l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~  486 (973)
                      +....+..+....+|+.+++++|++++..+..|..+++|+.|++++|++++..+..|.++++|+.+++++|++++..|..
T Consensus       117 ~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l~~N~l~~l~~~~f~~l~~L~~l~l~~N~l~~i~~~~  196 (284)
T d1ozna_         117 LQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHA  196 (284)
T ss_dssp             CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTT
T ss_pred             cccccccccchhcccchhhhccccccccChhHhccccchhhcccccCcccccchhhhccccccchhhhhhccccccChhH
Confidence            66555555666666666666666666555666667777777777777777666777777777777777777777777778


Q ss_pred             ccCCCCCCeEEccCCcCcccCCcccccCCcCCEEEcccCccccCCCCCcccccccccccccccccCCCCCcccccccccc
Q 048430          487 IGNLEALGGLNLTGNQLSGYIPSSIGNLKNLDWLALARNAFQGPIPQSFGSLISLQSLDLSGNNISGEIPKSLEKLSRLV  566 (973)
Q Consensus       487 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~  566 (973)
                      |.++++|++|++++|++++..|..|+.+++|+.|+|++|.+.+.-+ .-.-...++.+....+++....|..+.+   +.
T Consensus       197 f~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~l~~N~l~C~C~-~~~l~~~l~~~~~~~~~~~C~~p~~l~g---~~  272 (284)
T d1ozna_         197 FRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCR-ARPLWAWLQKFRGSSSEVPCSLPQRLAG---RD  272 (284)
T ss_dssp             TTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGG-GHHHHHHHHHCCSEECCCBEEESGGGTT---CB
T ss_pred             hhhhhhcccccccccccccccccccccccccCEEEecCCCCCCCcc-chHHHHHHHhCcCCCCceEeCCchHHcC---Cc
Confidence            8888888888888888887777788888888888888888875433 1222345777777788887777776654   34


Q ss_pred             ccccCCCcccc
Q 048430          567 DFNVSFNGLEG  577 (973)
Q Consensus       567 ~l~ls~N~l~~  577 (973)
                      ..+++.+.|+|
T Consensus       273 l~~l~~~~l~g  283 (284)
T d1ozna_         273 LKRLAANDLQG  283 (284)
T ss_dssp             GGGSCGGGSCC
T ss_pred             cccCCHHHCCC
Confidence            55667776665


No 70 
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.92  E-value=5.1e-25  Score=235.20  Aligned_cols=210  Identities=23%  Similarity=0.216  Sum_probs=167.4

Q ss_pred             CcccEEEeecCccccccCcccCCCCCCCEEEccCCcCCCCCchhhhccCcCCeeec-CCccccCcCcccccCcCCCCeee
Q 048430          371 SNLLVLSLVNNELAGAIPTVLGKLQKLQGLDLNSNKLKGFIPTDLCKLEKLNTLLS-NNNALQGQIPTCLANLTSLRHLD  449 (973)
Q Consensus       371 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l-~~N~l~~~~~~~~~~l~~L~~L~  449 (973)
                      +++++|+|++|+|+...+..|.++++|++|++++|++..+.+..+..+..+..+.. ..|.++...+..|.++++|++|+
T Consensus        32 ~~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~l~~L~~L~  111 (284)
T d1ozna_          32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLH  111 (284)
T ss_dssp             TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEE
T ss_pred             CCCCEEECcCCcCCCCCHHHhhccccccccccccccccccccccccccccccccccccccccccccchhhcccccCCEEe
Confidence            45778888888887666667888888888888888888777777777777777754 45666666677788888888888


Q ss_pred             ccCCCCCCCCcccccccccccEEEecCCcccCCcCcCccCCCCCCeEEccCCcCcccCCcccccCCcCCEEEcccCcccc
Q 048430          450 FRSNSLNSTIPSTFWSLKYILAVDFSLNSLSGSLPLNIGNLEALGGLNLTGNQLSGYIPSSIGNLKNLDWLALARNAFQG  529 (973)
Q Consensus       450 L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~  529 (973)
                      +++|.+....+..+....+|+.+++++|++++..+..|..+++|+.|++++|++++..+..|.++++|+.+++++|++++
T Consensus       112 l~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l~~N~l~~l~~~~f~~l~~L~~l~l~~N~l~~  191 (284)
T d1ozna_         112 LDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAH  191 (284)
T ss_dssp             CTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCE
T ss_pred             cCCcccccccccccchhcccchhhhccccccccChhHhccccchhhcccccCcccccchhhhccccccchhhhhhccccc
Confidence            88888877777777778888888888888886666778888888888888888887777788888888888888888888


Q ss_pred             CCCCCcccccccccccccccccCCCCCccccccccccccccCCCcccccCC
Q 048430          530 PIPQSFGSLISLQSLDLSGNNISGEIPKSLEKLSRLVDFNVSFNGLEGEIP  580 (973)
Q Consensus       530 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p  580 (973)
                      ..|..|..+++|++||+++|++++..|..|..+++|++|++++|++.+..+
T Consensus       192 i~~~~f~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~l~~N~l~C~C~  242 (284)
T d1ozna_         192 VHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCR  242 (284)
T ss_dssp             ECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGG
T ss_pred             cChhHhhhhhhcccccccccccccccccccccccccCEEEecCCCCCCCcc
Confidence            888888888888888888888888777888888888888888888877654


No 71 
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.89  E-value=4e-23  Score=217.79  Aligned_cols=202  Identities=25%  Similarity=0.232  Sum_probs=153.1

Q ss_pred             CCCcccEEEeecCccccccCcccCCCCCCCEEEccCCcCCCCCchhhhccCcCCeeecCCccccCcCcccccCcCCCCee
Q 048430          369 NLSNLLVLSLVNNELAGAIPTVLGKLQKLQGLDLNSNKLKGFIPTDLCKLEKLNTLLSNNNALQGQIPTCLANLTSLRHL  448 (973)
Q Consensus       369 ~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L  448 (973)
                      ....+.+++.++++++ .+|..+.  +++++|+|++|+|++..+..|.++++|++|+|++|+|+.. + .++.+++|++|
T Consensus         8 ~~~~~~~v~C~~~~L~-~iP~~lp--~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~~l-~-~~~~l~~L~~L   82 (266)
T d1p9ag_           8 KVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKL-Q-VDGTLPVLGTL   82 (266)
T ss_dssp             CSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEE-E-CCSCCTTCCEE
T ss_pred             ccCCCeEEEccCCCCC-eeCcCcC--cCCCEEECcCCcCCCcCHHHhhcccccccccccccccccc-c-ccccccccccc
Confidence            3455666777778877 4565543  4678888888888766566777888888888888887733 3 34677888888


Q ss_pred             eccCCCCCCCCcccccccccccEEEecCCcccCCcCcCccCCCCCCeEEccCCcCcccCCcccccCCcCCEEEcccCccc
Q 048430          449 DFRSNSLNSTIPSTFWSLKYILAVDFSLNSLSGSLPLNIGNLEALGGLNLTGNQLSGYIPSSIGNLKNLDWLALARNAFQ  528 (973)
Q Consensus       449 ~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~  528 (973)
                      +|++|++++ .+..+..+++|+.|++++|.+.+..+..+..+.+++.|++++|.++...+..+..++.|+.|++++|+|+
T Consensus        83 ~Ls~N~l~~-~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~l~~L~l~~n~l~~l~~~~~~~l~~l~~l~l~~N~l~  161 (266)
T d1p9ag_          83 DLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLT  161 (266)
T ss_dssp             ECCSSCCSS-CCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCS
T ss_pred             ccccccccc-cccccccccccccccccccccceeeccccccccccccccccccccceeccccccccccchhccccccccc
Confidence            888888764 4667777888888888888887777777777888888888888888666667777888888888888888


Q ss_pred             cCCCCCcccccccccccccccccCCCCCccccccccccccccCCCcccc
Q 048430          529 GPIPQSFGSLISLQSLDLSGNNISGEIPKSLEKLSRLVDFNVSFNGLEG  577 (973)
Q Consensus       529 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~  577 (973)
                      +..+..|..+++|++|+|++|+|+ .+|..+..+++|+.|+|++|++.+
T Consensus       162 ~~~~~~~~~l~~L~~L~Ls~N~L~-~lp~~~~~~~~L~~L~L~~Np~~C  209 (266)
T d1p9ag_         162 ELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLC  209 (266)
T ss_dssp             CCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCC
T ss_pred             ccCccccccccccceeecccCCCc-ccChhHCCCCCCCEEEecCCCCCC
Confidence            777777888888888888888887 677777788888888888776654


No 72 
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.88  E-value=1.5e-22  Score=213.38  Aligned_cols=200  Identities=22%  Similarity=0.264  Sum_probs=125.3

Q ss_pred             ccccCCcEEEccCCCCCCCCCccccCCCCCccEEEeeCcccCCCCCccccCCCCCCeEEccCccccccCCccccCCCCCc
Q 048430           90 WHMRRLKIIDFSSNSLSGSLPGDMCNSFTQLESFDVSSNKITGEFPSAIVNISSLKSIRLDNNSLSGSFPTDLCTRLPSL  169 (973)
Q Consensus        90 ~~l~~L~~L~Ls~n~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L  169 (973)
                      .+.+.+...|.+++.++ .+|.++.   ++|++|||++|+|++..+.+|.++++|++|+|++|+|+ .+|.  +..+++|
T Consensus         7 ~~~~~~~~v~C~~~~L~-~iP~~lp---~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~-~l~~--~~~l~~L   79 (266)
T d1p9ag_           7 SKVASHLEVNCDKRNLT-ALPPDLP---KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELT-KLQV--DGTLPVL   79 (266)
T ss_dssp             ECSTTCCEEECTTSCCS-SCCSCCC---TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCC-EEEC--CSCCTTC
T ss_pred             cccCCCeEEEccCCCCC-eeCcCcC---cCCCEEECcCCcCCCcCHHHhhcccccccccccccccc-cccc--ccccccc
Confidence            44556666778887777 6776552   56788888888888655567888888888888888887 6654  3467888


Q ss_pred             cEEEcccccccccCCCCCCCccccCCCCccEEEecCCcccCccccccccCCcceeEEeecccccccCCCCC-Ccccccee
Q 048430          170 VQLRLLGNNITGRIPNREIPNEIGNLHNLKILDLGGNNIAGLIPSMIFNNSNMVAILLYGNHLSGHLPSSI-YLPNLENL  248 (973)
Q Consensus       170 ~~L~L~~N~l~~~~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~-~l~~L~~L  248 (973)
                      ++|+|++|+++      ..+..+.++++|++|++++|.+.+..+..+..+.+++.|++++|.++...+... .+++|+.|
T Consensus        80 ~~L~Ls~N~l~------~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~l~~L~l~~n~l~~l~~~~~~~l~~l~~l  153 (266)
T d1p9ag_          80 GTLDLSHNQLQ------SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKL  153 (266)
T ss_dssp             CEEECCSSCCS------SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEE
T ss_pred             ccccccccccc------ccccccccccccccccccccccceeeccccccccccccccccccccceeccccccccccchhc
Confidence            88888888886      445677788888888888888877666666664444444444444443333322 24455555


Q ss_pred             eeccccccccCcchhcccCcccEEEeccccccccCCCcccccccceEEEccCCcC
Q 048430          249 FLWKNNLSGIIPDSICNASEATILELSSNLFSGLVPNTFGNCRQLQILSLGDNQL  303 (973)
Q Consensus       249 ~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l  303 (973)
                      ++++|+++++.++.|..+++|++|+|++|+|+. +|..+..+++|+.|+|++|.+
T Consensus       154 ~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~L~~-lp~~~~~~~~L~~L~L~~Np~  207 (266)
T d1p9ag_         154 SLANNNLTELPAGLLNGLENLDTLLLQENSLYT-IPKGFFGSHLLPFAFLHGNPW  207 (266)
T ss_dssp             ECTTSCCSCCCTTTTTTCTTCCEEECCSSCCCC-CCTTTTTTCCCSEEECCSCCB
T ss_pred             ccccccccccCccccccccccceeecccCCCcc-cChhHCCCCCCCEEEecCCCC
Confidence            555555554444445555555555555555552 233333444555555555544


No 73 
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.87  E-value=3.2e-20  Score=204.32  Aligned_cols=96  Identities=34%  Similarity=0.495  Sum_probs=60.5

Q ss_pred             CCcEEEccCCCCCCCCCccccCCCCCccEEEeeCcccCCCCCccccCCCCCCeEEccCccccccCCccccCCCCCccEEE
Q 048430           94 RLKIIDFSSNSLSGSLPGDMCNSFTQLESFDVSSNKITGEFPSAIVNISSLKSIRLDNNSLSGSFPTDLCTRLPSLVQLR  173 (973)
Q Consensus        94 ~L~~L~Ls~n~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~  173 (973)
                      +++.|||++|.++ .+|+    .+++|++|+|++|+|+ .+|+.+   .+|+.|++++|+++ .++. +   .+.|++|+
T Consensus        39 ~l~~LdLs~~~L~-~lp~----~~~~L~~L~Ls~N~l~-~lp~~~---~~L~~L~l~~n~l~-~l~~-l---p~~L~~L~  104 (353)
T d1jl5a_          39 QAHELELNNLGLS-SLPE----LPPHLESLVASCNSLT-ELPELP---QSLKSLLVDNNNLK-ALSD-L---PPLLEYLG  104 (353)
T ss_dssp             TCSEEECTTSCCS-CCCS----CCTTCSEEECCSSCCS-SCCCCC---TTCCEEECCSSCCS-CCCS-C---CTTCCEEE
T ss_pred             CCCEEEeCCCCCC-CCCC----CCCCCCEEECCCCCCc-ccccch---hhhhhhhhhhcccc-hhhh-h---cccccccc
Confidence            4666777777766 5663    2456777777777776 556543   45677777777776 5542 1   23577777


Q ss_pred             cccccccccCCCCCCCccccCCCCccEEEecCCcccC
Q 048430          174 LLGNNITGRIPNREIPNEIGNLHNLKILDLGGNNIAG  210 (973)
Q Consensus       174 L~~N~l~~~~~~~~~p~~l~~l~~L~~L~L~~N~l~~  210 (973)
                      +++|.|+      .+|. ++.+++|++|++++|.+..
T Consensus       105 L~~n~l~------~lp~-~~~l~~L~~L~l~~~~~~~  134 (353)
T d1jl5a_         105 VSNNQLE------KLPE-LQNSSFLKIIDVDNNSLKK  134 (353)
T ss_dssp             CCSSCCS------SCCC-CTTCTTCCEEECCSSCCSC
T ss_pred             ccccccc------cccc-hhhhccceeeccccccccc
Confidence            7777765      3443 5667777777777776653


No 74 
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.85  E-value=1e-19  Score=200.27  Aligned_cols=59  Identities=25%  Similarity=0.376  Sum_probs=33.3

Q ss_pred             CCCCCeEEccCCcCcccCCcccccCCcCCEEEcccCccccCCCCCcccccccccccccccccCCCCCc
Q 048430          490 LEALGGLNLTGNQLSGYIPSSIGNLKNLDWLALARNAFQGPIPQSFGSLISLQSLDLSGNNISGEIPK  557 (973)
Q Consensus       490 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~  557 (973)
                      +++|++|+|++|+|+ .+|..   +++|+.|+|++|+|+ .+|..   +.+|++|+|++|+|+ .+|.
T Consensus       283 ~~~L~~L~Ls~N~l~-~lp~~---~~~L~~L~L~~N~L~-~l~~~---~~~L~~L~L~~N~L~-~lp~  341 (353)
T d1jl5a_         283 PPSLEELNVSNNKLI-ELPAL---PPRLERLIASFNHLA-EVPEL---PQNLKQLHVEYNPLR-EFPD  341 (353)
T ss_dssp             CTTCCEEECCSSCCS-CCCCC---CTTCCEEECCSSCCS-CCCCC---CTTCCEEECCSSCCS-SCCC
T ss_pred             CCCCCEEECCCCccC-ccccc---cCCCCEEECCCCcCC-ccccc---cCCCCEEECcCCcCC-CCCc
Confidence            355666666666665 44432   345666666666665 45532   345666666666665 4444


No 75 
>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=99.83  E-value=2.2e-21  Score=193.03  Aligned_cols=168  Identities=15%  Similarity=0.156  Sum_probs=120.2

Q ss_pred             CCccccccCceEEEEEEeCCCeEEEEEEEeccc------------------hhhHHHHHHHHHHHHhccCCceeEEEeee
Q 048430          684 ESNLLGSGSFDNVYKATLANGVSVAVKVFNLQE------------------DRALKSFDTECEVMRRIRHRNLIKIVSSC  745 (973)
Q Consensus       684 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~------------------~~~~~~~~~e~~~l~~l~h~niv~l~~~~  745 (973)
                      ..++||+|+||+||+|+..+|+.||||+++...                  ........+|...+.++.|.+++..+++.
T Consensus         4 vg~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~~~   83 (191)
T d1zara2           4 IGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYAWE   83 (191)
T ss_dssp             EEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEEEE
T ss_pred             hCCEeeeCcceEEEEEECCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEEec
Confidence            457899999999999998899999999875321                  01123456788999999999999888664


Q ss_pred             ecCCeeEEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCcEEeCCCCcEEEeecc
Q 048430          746 SNPGFKALIMQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHGYSTPIIHCDLKPNNVLLDDDMVAHLGDFG  825 (973)
Q Consensus       746 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg  825 (973)
                      .    .++||||+++..+.+        ++......++.|+++|++|||   ..+|+||||||+|||++++ .++++|||
T Consensus        84 ~----~~lvme~~~~~~~~~--------l~~~~~~~i~~ql~~~l~~lH---~~giiHrDiKP~NILv~~~-~~~liDFG  147 (191)
T d1zara2          84 G----NAVLMELIDAKELYR--------VRVENPDEVLDMILEEVAKFY---HRGIVHGDLSQYNVLVSEE-GIWIIDFP  147 (191)
T ss_dssp             T----TEEEEECCCCEEGGG--------CCCSCHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEEETT-EEEECCCT
T ss_pred             C----CEEEEEeeccccccc--------hhhHHHHHHHHHHHHHHHHHh---hCCEEEccCChhheeeeCC-CEEEEECC
Confidence            2    379999998865433        334456789999999999999   7999999999999999976 58999999


Q ss_pred             cccccCCCCCcccccccccccccCccCCCCCCCCcchhHHHHHHHH
Q 048430          826 IAKLLDGVDPVTQTMTLATIGYMAPEYGSEGIVSISGDVYSFGILM  871 (973)
Q Consensus       826 la~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws~Gvvl  871 (973)
                      .|..........  ........ -.++ ..+.++.++||||..--+
T Consensus       148 ~a~~~~~~~~~~--~l~rd~~~-~~~~-f~r~y~~~~d~~s~~~~~  189 (191)
T d1zara2         148 QSVEVGEEGWRE--ILERDVRN-IITY-FSRTYRTEKDINSAIDRI  189 (191)
T ss_dssp             TCEETTSTTHHH--HHHHHHHH-HHHH-HHHHHCCCCCHHHHHHHH
T ss_pred             CcccCCCCCcHH--HHHHHHHH-HHHH-HcCCCCCcccHHHHHHHH
Confidence            997654221110  00000000 0011 135577889999975433


No 76 
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.78  E-value=6.7e-19  Score=182.49  Aligned_cols=213  Identities=17%  Similarity=0.195  Sum_probs=125.9

Q ss_pred             CCCCCcCCCCCCCCCCCcEEEecCCCCCCCCCcccccccCCcEEEccCCCCCCCCCccccCCCCCccEEEeeC-cccCCC
Q 048430           55 LSLGGTLPPHVGNLSFLVSLNISGNSFYDTLPNELWHMRRLKIIDFSSNSLSGSLPGDMCNSFTQLESFDVSS-NKITGE  133 (973)
Q Consensus        55 ~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~~l~~L~~L~Ls~-N~l~~~  133 (973)
                      .+++ ++|+.+-  +++++|+|++|++....+..|.++++|++|+|++|.+...+|...|..++++++|++.. |.+...
T Consensus        18 ~~l~-~iP~~l~--~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~~n~l~~~   94 (242)
T d1xwdc1          18 SKVT-EIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYI   94 (242)
T ss_dssp             CSCS-SCCSCSC--SCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEECCTTCCEE
T ss_pred             CCCC-CcCCCCC--CCCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeecccccccccccccccccccccccc
Confidence            4455 6665542  46777888877775433345777777777777777776556666666677777776653 556555


Q ss_pred             CCccccCCCCCCeEEccCccccccCCc-cccCCCCCccEEEcccccccccCCCCCCCccccCCCCccEEEecCCcccCcc
Q 048430          134 FPSAIVNISSLKSIRLDNNSLSGSFPT-DLCTRLPSLVQLRLLGNNITGRIPNREIPNEIGNLHNLKILDLGGNNIAGLI  212 (973)
Q Consensus       134 ~p~~~~~l~~L~~L~L~~N~l~~~ip~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~  212 (973)
                      .+..|.++++|++|++++|.+. .++. ..+..+..+..+...++.+                             ....
T Consensus        95 ~~~~~~~l~~L~~l~l~~~~l~-~~~~~~~~~~l~~l~~~~~~n~~l-----------------------------~~i~  144 (242)
T d1xwdc1          95 NPEAFQNLPNLQYLLISNTGIK-HLPDVHKIHSLQKVLLDIQDNINI-----------------------------HTIE  144 (242)
T ss_dssp             CTTSEECCTTCCEEEEESCCCC-SCCCCTTTCBSSCEEEEEESCTTC-----------------------------CEEC
T ss_pred             ccccccccccccccccchhhhc-cccccccccccccccccccccccc-----------------------------cccc
Confidence            5566666677777777776665 3322 2222333344444444444                             3333


Q ss_pred             ccccccCC-cceeEEeecccccccCCCCCCcccccee-eeccccccccCcchhcccCcccEEEeccccccccCCCccccc
Q 048430          213 PSMIFNNS-NMVAILLYGNHLSGHLPSSIYLPNLENL-FLWKNNLSGIIPDSICNASEATILELSSNLFSGLVPNTFGNC  290 (973)
Q Consensus       213 ~~~~~~~~-~L~~L~l~~n~l~~~~~~~~~l~~L~~L-~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l  290 (973)
                      +..+.+++ .++.|++++|+++...+..+..++++++ ++++|+++.+.++.|..+++|++|+|++|+|+.+++..|.++
T Consensus       145 ~~~~~~~~~~l~~L~l~~n~l~~i~~~~~~~~~l~~~~~l~~n~l~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l  224 (242)
T d1xwdc1         145 RNSFVGLSFESVILWLNKNGIQEIHNCAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENL  224 (242)
T ss_dssp             TTSSTTSBSSCEEEECCSSCCCEECTTTTTTCCEEEEECTTCTTCCCCCTTTTTTSCCCSEEECTTSCCCCCCSSSCTTC
T ss_pred             ccccccccccceeeecccccccccccccccchhhhccccccccccccccHHHhcCCCCCCEEECCCCcCCccCHHHHcCC
Confidence            33333321 3334444444444333333334454444 457777776656667888888888888888887777777777


Q ss_pred             ccceEEEccC
Q 048430          291 RQLQILSLGD  300 (973)
Q Consensus       291 ~~L~~L~L~~  300 (973)
                      ++|+.|++.+
T Consensus       225 ~~L~~l~~~~  234 (242)
T d1xwdc1         225 KKLRARSTYN  234 (242)
T ss_dssp             CEEESSSEES
T ss_pred             cccccCcCCC
Confidence            7777776643


No 77 
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.77  E-value=6.5e-22  Score=226.44  Aligned_cols=160  Identities=19%  Similarity=0.115  Sum_probs=79.4

Q ss_pred             CCcccEEEeecCccccc----cCcccCCCCCCCEEEccCCcCCCCCchhhh-----ccCcCCeeecCCccccCcCcccc-
Q 048430          370 LSNLLVLSLVNNELAGA----IPTVLGKLQKLQGLDLNSNKLKGFIPTDLC-----KLEKLNTLLSNNNALQGQIPTCL-  439 (973)
Q Consensus       370 l~~L~~L~Ls~n~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~-----~l~~L~~L~l~~N~l~~~~~~~~-  439 (973)
                      ...++.|++++|.+...    ....+...+.++.+++++|.++......+.     ....|+.+++++|.++......+ 
T Consensus       254 ~~~l~~l~l~~n~i~~~~~~~~~~~l~~~~~l~~l~l~~n~i~~~~~~~l~~~l~~~~~~L~~l~l~~~~l~~~~~~~l~  333 (460)
T d1z7xw1         254 SSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFS  333 (460)
T ss_dssp             TCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHH
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccchhhccccccccccccccccccchhhhhhhhcc
Confidence            34455555555555421    122233455555566665555422111111     12345566666665554332222 


Q ss_pred             ---cCcCCCCeeeccCCCCCCC----Cccccc-ccccccEEEecCCcccCC----cCcCccCCCCCCeEEccCCcCcccC
Q 048430          440 ---ANLTSLRHLDFRSNSLNST----IPSTFW-SLKYILAVDFSLNSLSGS----LPLNIGNLEALGGLNLTGNQLSGYI  507 (973)
Q Consensus       440 ---~~l~~L~~L~L~~N~l~~~----~p~~~~-~l~~L~~L~ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~  507 (973)
                         ....+|++|+|++|+++..    ++..+. ..+.|++|++++|.|+..    ++..+..+++|++|+|++|+|+...
T Consensus       334 ~~~~~~~~L~~L~Ls~N~i~~~g~~~l~~~l~~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g  413 (460)
T d1z7xw1         334 SVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAG  413 (460)
T ss_dssp             HHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCHHH
T ss_pred             cccccccchhhhheeeecccCcccchhhhhhhcccCCCCEEECCCCCCChHHHHHHHHHHhcCCCCCEEECCCCcCCHHH
Confidence               2334566666666665421    122222 234566666666666532    3334455567777777777776432


Q ss_pred             Cccc----c-cCCcCCEEEcccCcccc
Q 048430          508 PSSI----G-NLKNLDWLALARNAFQG  529 (973)
Q Consensus       508 p~~~----~-~l~~L~~L~Ls~N~l~~  529 (973)
                      ...+    . +...|+.|++++|.+..
T Consensus       414 ~~~l~~~l~~~~~~L~~l~l~~~~~~~  440 (460)
T d1z7xw1         414 ILQLVESVRQPGCLLEQLVLYDIYWSE  440 (460)
T ss_dssp             HHHHHHHHTSTTCCCCEEECTTCCCCH
T ss_pred             HHHHHHHHHhCCCccCEEECCCCCCCH
Confidence            2222    1 23357777777777664


No 78 
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.77  E-value=5.3e-22  Score=227.22  Aligned_cols=186  Identities=21%  Similarity=0.129  Sum_probs=107.1

Q ss_pred             CCCCcccEEEeecCcccc-----ccCcccCCCCCCCEEEccCCcCCCCC----chhhhccCcCCeeecCCccccCcCccc
Q 048430          368 GNLSNLLVLSLVNNELAG-----AIPTVLGKLQKLQGLDLNSNKLKGFI----PTDLCKLEKLNTLLSNNNALQGQIPTC  438 (973)
Q Consensus       368 ~~l~~L~~L~Ls~n~l~~-----~~p~~~~~l~~L~~L~Ls~N~l~~~~----~~~~~~l~~L~~L~l~~N~l~~~~~~~  438 (973)
                      ...+.++.+++++|.+..     ..+..+.....++.+++++|.+....    ...+...+.++.+++++|.++......
T Consensus       223 ~~~~~~~~l~~~~n~~~~~~~~~~~~~~~~~~~~l~~l~l~~n~i~~~~~~~~~~~l~~~~~l~~l~l~~n~i~~~~~~~  302 (460)
T d1z7xw1         223 ASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARL  302 (460)
T ss_dssp             HHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHH
T ss_pred             cccccccccchhhccccccccchhhcccccccccccccccccccccccccccccccccccccccccccccccccccccch
Confidence            345677888888887642     23344555677888888888876332    233455677888888888776433222


Q ss_pred             c-----cCcCCCCeeeccCCCCCCCCccc----ccccccccEEEecCCcccCC----cCcCcc-CCCCCCeEEccCCcCc
Q 048430          439 L-----ANLTSLRHLDFRSNSLNSTIPST----FWSLKYILAVDFSLNSLSGS----LPLNIG-NLEALGGLNLTGNQLS  504 (973)
Q Consensus       439 ~-----~~l~~L~~L~L~~N~l~~~~p~~----~~~l~~L~~L~ls~N~l~~~----~p~~~~-~l~~L~~L~Ls~N~l~  504 (973)
                      +     .....|+.+++++|.++......    +...++|+.|||++|++++.    ++..+. ..+.|+.|+|++|+|+
T Consensus       303 l~~~l~~~~~~L~~l~l~~~~l~~~~~~~l~~~~~~~~~L~~L~Ls~N~i~~~g~~~l~~~l~~~~~~L~~L~Ls~n~i~  382 (460)
T d1z7xw1         303 LCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVS  382 (460)
T ss_dssp             HHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCC
T ss_pred             hhccccccccccccccccccchhhhhhhhcccccccccchhhhheeeecccCcccchhhhhhhcccCCCCEEECCCCCCC
Confidence            2     12346778888887776432222    23345677777777776532    222222 3455677777777775


Q ss_pred             cc----CCcccccCCcCCEEEcccCccccCCCCCcc-----cccccccccccccccCC
Q 048430          505 GY----IPSSIGNLKNLDWLALARNAFQGPIPQSFG-----SLISLQSLDLSGNNISG  553 (973)
Q Consensus       505 ~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-----~l~~L~~L~Ls~N~l~~  553 (973)
                      ..    ++..+..+++|++|+|++|+|+......|.     ....|+.|++++|.+..
T Consensus       383 ~~~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~l~~~l~~~~~~L~~l~l~~~~~~~  440 (460)
T d1z7xw1         383 DSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYWSE  440 (460)
T ss_dssp             HHHHHHHHHHHHHCCCCCEEECCSSSCCHHHHHHHHHHHTSTTCCCCEEECTTCCCCH
T ss_pred             hHHHHHHHHHHhcCCCCCEEECCCCcCCHHHHHHHHHHHHhCCCccCEEECCCCCCCH
Confidence            32    334455566677777777766532222221     12246666666666654


No 79 
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.76  E-value=9.8e-19  Score=179.12  Aligned_cols=202  Identities=21%  Similarity=0.315  Sum_probs=90.4

Q ss_pred             EEecCCCCCCCCCcccccccCCcEEEccCCCCCCCCCccccCCCCCccEEEeeCcccCCCCCccccCCCCCCeEEccCcc
Q 048430           74 LNISGNSFYDTLPNELWHMRRLKIIDFSSNSLSGSLPGDMCNSFTQLESFDVSSNKITGEFPSAIVNISSLKSIRLDNNS  153 (973)
Q Consensus        74 L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~  153 (973)
                      ++++.+++.+.+  .+..+.+|+.|++++|.++ .++.  ++.+++|++|++++|++++..|  +.++++|+.+++++|.
T Consensus        24 ~~l~~~~~~d~~--~~~~l~~L~~L~l~~~~i~-~l~~--l~~l~~L~~L~ls~n~i~~~~~--l~~l~~l~~l~~~~n~   96 (227)
T d1h6ua2          24 IAAGKSNVTDTV--TQADLDGITTLSAFGTGVT-TIEG--VQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNP   96 (227)
T ss_dssp             HHTTCSSTTSEE--CHHHHHTCCEEECTTSCCC-CCTT--GGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCC
T ss_pred             HHhCCCCcCCcC--CHHHcCCcCEEECCCCCCC-cchh--HhcCCCCcEeecCCceeecccc--cccccccccccccccc
Confidence            344444444322  3344555555555555555 3432  3445555555555555553322  5555555555555555


Q ss_pred             ccccCCccccCCCCCccEEEcccccccccCCCCCCCccccCCCCccEEEecCCcccCccccccccCCcceeEEeeccccc
Q 048430          154 LSGSFPTDLCTRLPSLVQLRLLGNNITGRIPNREIPNEIGNLHNLKILDLGGNNIAGLIPSMIFNNSNMVAILLYGNHLS  233 (973)
Q Consensus       154 l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~l~~n~l~  233 (973)
                      ++ .++.  +.++++|+.|+++++...+.       ..+...+.++.+.++.+.+....  .+...++|+.|++++|.++
T Consensus        97 ~~-~i~~--l~~l~~L~~l~l~~~~~~~~-------~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~L~~L~l~~n~~~  164 (227)
T d1h6ua2          97 LK-NVSA--IAGLQSIKTLDLTSTQITDV-------TPLAGLSNLQVLYLDLNQITNIS--PLAGLTNLQYLSIGNAQVS  164 (227)
T ss_dssp             CS-CCGG--GTTCTTCCEEECTTSCCCCC-------GGGTTCTTCCEEECCSSCCCCCG--GGGGCTTCCEEECCSSCCC
T ss_pred             cc-cccc--cccccccccccccccccccc-------chhccccchhhhhchhhhhchhh--hhccccccccccccccccc
Confidence            54 3331  23455555555555554321       12344455555555555554321  1333333333333333322


Q ss_pred             ccCCCCCCccccceeeeccccccccCcchhcccCcccEEEeccccccccCCCcccccccceEEEcc
Q 048430          234 GHLPSSIYLPNLENLFLWKNNLSGIIPDSICNASEATILELSSNLFSGLVPNTFGNCRQLQILSLG  299 (973)
Q Consensus       234 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~  299 (973)
                      +..+ ...+++|++|+|++|+++++ + .++.+++|++|+|++|+++++.|  ++++++|++|+++
T Consensus       165 ~~~~-l~~l~~L~~L~Ls~n~l~~l-~-~l~~l~~L~~L~Ls~N~lt~i~~--l~~l~~L~~L~ls  225 (227)
T d1h6ua2         165 DLTP-LANLSKLTTLKADDNKISDI-S-PLASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLT  225 (227)
T ss_dssp             CCGG-GTTCTTCCEEECCSSCCCCC-G-GGGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEE
T ss_pred             cchh-hcccccceecccCCCccCCC-h-hhcCCCCCCEEECcCCcCCCCcc--cccCCCCCEEEee
Confidence            1111 11244455555555554432 1 24444455555555555444322  4444444444443


No 80 
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.76  E-value=4.1e-18  Score=176.42  Aligned_cols=202  Identities=18%  Similarity=0.121  Sum_probs=154.4

Q ss_pred             CcccEEEeecCccccccCcccCCCCCCCEEEccCCcCCCCC-chhhhccCcCCeeecC-CccccCcCcccccCcCCCCee
Q 048430          371 SNLLVLSLVNNELAGAIPTVLGKLQKLQGLDLNSNKLKGFI-PTDLCKLEKLNTLLSN-NNALQGQIPTCLANLTSLRHL  448 (973)
Q Consensus       371 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-~~~~~~l~~L~~L~l~-~N~l~~~~~~~~~~l~~L~~L  448 (973)
                      +++++|++++|.++...+..|.++++|++|+|++|.+...+ +..|.++++++.+.+. .|.+....+..|.++++|+++
T Consensus        29 ~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~~n~l~~~~~~~~~~l~~L~~l  108 (242)
T d1xwdc1          29 RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYL  108 (242)
T ss_dssp             SCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEECCTTCCEECTTSEECCTTCCEE
T ss_pred             CCCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeecccccccccccccccccccccccccccccccccccccc
Confidence            46888899999888666667888899999999998887544 4467788888888765 467777777888889999999


Q ss_pred             eccCCCCCCCCc-ccccccccccEEEecCCcccCCcCcCccCCC-CCCeEEccCCcCcccCCcccccCCcCC-EEEcccC
Q 048430          449 DFRSNSLNSTIP-STFWSLKYILAVDFSLNSLSGSLPLNIGNLE-ALGGLNLTGNQLSGYIPSSIGNLKNLD-WLALARN  525 (973)
Q Consensus       449 ~L~~N~l~~~~p-~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~-~L~Ls~N  525 (973)
                      ++++|++....+ ..+..+..+..+..+++.+....+..+.+++ .++.|++++|+++...+..| ...++. .+++++|
T Consensus       109 ~l~~~~l~~~~~~~~~~~l~~l~~~~~~n~~l~~i~~~~~~~~~~~l~~L~l~~n~l~~i~~~~~-~~~~l~~~~~l~~n  187 (242)
T d1xwdc1         109 LISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNCAF-NGTQLDELNLSDNN  187 (242)
T ss_dssp             EEESCCCCSCCCCTTTCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCEECTTTT-TTCCEEEEECTTCT
T ss_pred             ccchhhhcccccccccccccccccccccccccccccccccccccccceeeecccccccccccccc-cchhhhcccccccc
Confidence            999998875433 2345567777778888888765566676664 78889999999985444444 445544 4467888


Q ss_pred             ccccCCCCCcccccccccccccccccCCCCCccccccccccccccCCC
Q 048430          526 AFQGPIPQSFGSLISLQSLDLSGNNISGEIPKSLEKLSRLVDFNVSFN  573 (973)
Q Consensus       526 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~ls~N  573 (973)
                      +++...+..|.++++|++|+|++|+|+...+..|.++++|+.+++.+.
T Consensus       188 ~l~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~l~~~~l  235 (242)
T d1xwdc1         188 NLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARSTYNL  235 (242)
T ss_dssp             TCCCCCTTTTTTSCCCSEEECTTSCCCCCCSSSCTTCCEEESSSEESS
T ss_pred             ccccccHHHhcCCCCCCEEECCCCcCCccCHHHHcCCcccccCcCCCC
Confidence            898555667899999999999999999666677899999998887643


No 81 
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.75  E-value=2.1e-18  Score=171.40  Aligned_cols=157  Identities=22%  Similarity=0.227  Sum_probs=92.7

Q ss_pred             cCCeeecCCccccC-cCcccccCcCCCCeeeccCCCCCCCCcccccccccccEEEecCCcccCCcCcCccCCCCCCeEEc
Q 048430          420 KLNTLLSNNNALQG-QIPTCLANLTSLRHLDFRSNSLNSTIPSTFWSLKYILAVDFSLNSLSGSLPLNIGNLEALGGLNL  498 (973)
Q Consensus       420 ~L~~L~l~~N~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L  498 (973)
                      ++++|+|++|+|++ ..+..|.++++|++|+|++|.+.+..+..|..+++|+.|++++|+|++..|..|.++++|++|+|
T Consensus        30 ~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~N~l~~l~~~~F~~l~~L~~L~L  109 (192)
T d1w8aa_          30 HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNL  109 (192)
T ss_dssp             TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEEC
T ss_pred             CCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeeeccccccccCHHHHhCCCccccccc
Confidence            34444444444433 22334455555666666666655555555555556666666666666555556666777777777


Q ss_pred             cCCcCcccCCcccccCCcCCEEEcccCccccCCCCCcccccccccccccccccCCCCCccccccccccccccCCCccccc
Q 048430          499 TGNQLSGYIPSSIGNLKNLDWLALARNAFQGPIPQSFGSLISLQSLDLSGNNISGEIPKSLEKLSRLVDFNVSFNGLEGE  578 (973)
Q Consensus       499 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~  578 (973)
                      ++|+|++..|..|..+++|++|+|++|.+....+ ...-...++.+.+..|.++...|..+   ..++.++|+.|.|.+.
T Consensus       110 ~~N~l~~i~~~~f~~l~~L~~l~L~~N~~~~~~~-~~~~~~~l~~~~l~~~~~~c~~p~~l---~~~~l~~L~~n~l~C~  185 (192)
T d1w8aa_         110 YDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH-LAWFAEWLRKKSLNGGAARCGAPSKV---RDVQIKDLPHSEFKCS  185 (192)
T ss_dssp             CSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG-GHHHHHHHHHHCCSGGGCBBCSSTTT---TTSBGGGSCTTTCCCC
T ss_pred             CCccccccCHHHhcCCcccccccccccccccccc-hHHHhhhhhhhcccCCCeEeCCChhh---cCCEeeecCHhhCcCC
Confidence            7777776666667777777777777777764332 22223346667777777776666544   3455667777777644


Q ss_pred             CC
Q 048430          579 IP  580 (973)
Q Consensus       579 ~p  580 (973)
                      .+
T Consensus       186 ~~  187 (192)
T d1w8aa_         186 SE  187 (192)
T ss_dssp             CC
T ss_pred             CC
Confidence            33


No 82 
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.75  E-value=2.4e-18  Score=176.14  Aligned_cols=148  Identities=27%  Similarity=0.372  Sum_probs=57.5

Q ss_pred             CCCcccEEEeecCccccccCcccCCCCCCCEEEccCCcCCCCCchhhhccCcCCeeecCCccccCcCcccccCcCCCCee
Q 048430          369 NLSNLLVLSLVNNELAGAIPTVLGKLQKLQGLDLNSNKLKGFIPTDLCKLEKLNTLLSNNNALQGQIPTCLANLTSLRHL  448 (973)
Q Consensus       369 ~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L  448 (973)
                      .+++|++|++++|.+++..|  +..+++|+++++++|.++. ++ .+.++++|+.+.++++...+.  ..+...+.++.+
T Consensus        61 ~l~~L~~L~ls~n~i~~~~~--l~~l~~l~~l~~~~n~~~~-i~-~l~~l~~L~~l~l~~~~~~~~--~~~~~~~~~~~l  134 (227)
T d1h6ua2          61 YLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTLDLTSTQITDV--TPLAGLSNLQVL  134 (227)
T ss_dssp             GCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEECTTSCCCCC--GGGTTCTTCCEE
T ss_pred             cCCCCcEeecCCceeecccc--ccccccccccccccccccc-cc-ccccccccccccccccccccc--chhccccchhhh
Confidence            34444444444444443222  4444444444444444442 11 233444444444444433321  112333444444


Q ss_pred             eccCCCCCCCCcccccccccccEEEecCCcccCCcCcCccCCCCCCeEEccCCcCcccCCcccccCCcCCEEEcccCccc
Q 048430          449 DFRSNSLNSTIPSTFWSLKYILAVDFSLNSLSGSLPLNIGNLEALGGLNLTGNQLSGYIPSSIGNLKNLDWLALARNAFQ  528 (973)
Q Consensus       449 ~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~  528 (973)
                      .++.+.+...  ..+...++|+.|++++|.+++..  .++++++|+.|+|++|++++ ++ .++.+++|++|+|++|+++
T Consensus       135 ~~~~~~~~~~--~~~~~~~~L~~L~l~~n~~~~~~--~l~~l~~L~~L~Ls~n~l~~-l~-~l~~l~~L~~L~Ls~N~lt  208 (227)
T d1h6ua2         135 YLDLNQITNI--SPLAGLTNLQYLSIGNAQVSDLT--PLANLSKLTTLKADDNKISD-IS-PLASLPNLIEVHLKNNQIS  208 (227)
T ss_dssp             ECCSSCCCCC--GGGGGCTTCCEEECCSSCCCCCG--GGTTCTTCCEEECCSSCCCC-CG-GGGGCTTCCEEECTTSCCC
T ss_pred             hchhhhhchh--hhhccccccccccccccccccch--hhcccccceecccCCCccCC-Ch-hhcCCCCCCEEECcCCcCC
Confidence            4444443321  11233333334444333333211  13344444444444444442 21 1344444444444444444


No 83 
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.73  E-value=8.2e-18  Score=166.96  Aligned_cols=177  Identities=20%  Similarity=0.223  Sum_probs=144.4

Q ss_pred             CCeeecCCccccCcCcccccCcCCCCeeeccCCCCCC-CCcccccccccccEEEecCCcccCCcCcCccCCCCCCeEEcc
Q 048430          421 LNTLLSNNNALQGQIPTCLANLTSLRHLDFRSNSLNS-TIPSTFWSLKYILAVDFSLNSLSGSLPLNIGNLEALGGLNLT  499 (973)
Q Consensus       421 L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls  499 (973)
                      .++++.++++++ .+|..+.  +++++|+|++|+|++ ..+..|..+++|+.|++++|++++..+..+..+++|+.|+|+
T Consensus        10 ~~~v~Cs~~~L~-~iP~~lp--~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls   86 (192)
T d1w8aa_          10 GTTVDCTGRGLK-EIPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLG   86 (192)
T ss_dssp             TTEEECTTSCCS-SCCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred             CCEEEEeCCCcC-ccCCCCC--CCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeeec
Confidence            346777777777 4555543  689999999999986 446788999999999999999999999999999999999999


Q ss_pred             CCcCcccCCcccccCCcCCEEEcccCccccCCCCCcccccccccccccccccCCCCCccccccccccccccCCCcccccC
Q 048430          500 GNQLSGYIPSSIGNLKNLDWLALARNAFQGPIPQSFGSLISLQSLDLSGNNISGEIPKSLEKLSRLVDFNVSFNGLEGEI  579 (973)
Q Consensus       500 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~  579 (973)
                      +|+|++..|..|.++++|++|+|++|+|++..|..|..+++|++|+|++|.+....+..+ -...++.+.+..|.+.+..
T Consensus        87 ~N~l~~l~~~~F~~l~~L~~L~L~~N~l~~i~~~~f~~l~~L~~l~L~~N~~~~~~~~~~-~~~~l~~~~l~~~~~~c~~  165 (192)
T d1w8aa_          87 ENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAW-FAEWLRKKSLNGGAARCGA  165 (192)
T ss_dssp             SCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHH-HHHHHHHHCCSGGGCBBCS
T ss_pred             cccccccCHHHHhCCCcccccccCCccccccCHHHhcCCcccccccccccccccccchHH-HhhhhhhhcccCCCeEeCC
Confidence            999998888899999999999999999998889999999999999999999986543322 2334677888889998877


Q ss_pred             CCCCCCCccCccccccCcccccCC
Q 048430          580 PSGGPFVNFTADSFKQNYALCGSS  603 (973)
Q Consensus       580 p~~~~~~~~~~~~~~~n~~~c~~~  603 (973)
                      |.  .+....-..+..|..-|.++
T Consensus       166 p~--~l~~~~l~~L~~n~l~C~~~  187 (192)
T d1w8aa_         166 PS--KVRDVQIKDLPHSEFKCSSE  187 (192)
T ss_dssp             ST--TTTTSBGGGSCTTTCCCCCC
T ss_pred             Ch--hhcCCEeeecCHhhCcCCCC
Confidence            75  34444444556666566544


No 84 
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.72  E-value=2.3e-17  Score=166.14  Aligned_cols=179  Identities=25%  Similarity=0.362  Sum_probs=88.7

Q ss_pred             EecCCCCCCCCCcccccccCCcEEEccCCCCCCCCCccccCCCCCccEEEeeCcccCCCCCccccCCCCCCeEEccCccc
Q 048430           75 NISGNSFYDTLPNELWHMRRLKIIDFSSNSLSGSLPGDMCNSFTQLESFDVSSNKITGEFPSAIVNISSLKSIRLDNNSL  154 (973)
Q Consensus        75 ~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l  154 (973)
                      ++..+.+.+.++.  ..+.+|++|++++|.+. .++.  ++.+++|++|+|++|+|++. + .++++++|++|++++|+|
T Consensus        30 ~l~~~~~~~~~~~--~~L~~L~~L~l~~~~i~-~l~~--l~~l~~L~~L~L~~n~i~~l-~-~~~~l~~L~~L~l~~n~i  102 (210)
T d1h6ta2          30 NLKKKSVTDAVTQ--NELNSIDQIIANNSDIK-SVQG--IQYLPNVTKLFLNGNKLTDI-K-PLANLKNLGWLFLDENKV  102 (210)
T ss_dssp             HTTCSCTTSEECH--HHHHTCCEEECTTSCCC-CCTT--GGGCTTCCEEECCSSCCCCC-G-GGTTCTTCCEEECCSSCC
T ss_pred             HhCcCccCCccCH--HHhcCccEEECcCCCCC-Cchh--HhhCCCCCEEeCCCccccCc-c-ccccCccccccccccccc
Confidence            3444444333322  24555566666666555 3332  24455666666666665532 2 245555666666666655


Q ss_pred             cccCCccccCCCCCccEEEcccccccccCCCCCCCccccCCCCccEEEecCCcccCccccccccCCcceeEEeecccccc
Q 048430          155 SGSFPTDLCTRLPSLVQLRLLGNNITGRIPNREIPNEIGNLHNLKILDLGGNNIAGLIPSMIFNNSNMVAILLYGNHLSG  234 (973)
Q Consensus       155 ~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~l~~n~l~~  234 (973)
                      + .+|.  +..+++|+.|++++|.+.      .+ ..+..+++|+.+++++|.+++.  ..+..                
T Consensus       103 ~-~l~~--l~~l~~L~~L~l~~~~~~------~~-~~l~~l~~l~~l~~~~n~l~~~--~~~~~----------------  154 (210)
T d1h6ta2         103 K-DLSS--LKDLKKLKSLSLEHNGIS------DI-NGLVHLPQLESLYLGNNKITDI--TVLSR----------------  154 (210)
T ss_dssp             C-CGGG--GTTCTTCCEEECTTSCCC------CC-GGGGGCTTCCEEECCSSCCCCC--GGGGG----------------
T ss_pred             c-cccc--cccccccccccccccccc------cc-cccccccccccccccccccccc--ccccc----------------
Confidence            5 3432  334555555555555543      11 2345555555555555555422  11222                


Q ss_pred             cCCCCCCccccceeeeccccccccCcchhcccCcccEEEeccccccccCCCcccccccceEEEcc
Q 048430          235 HLPSSIYLPNLENLFLWKNNLSGIIPDSICNASEATILELSSNLFSGLVPNTFGNCRQLQILSLG  299 (973)
Q Consensus       235 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~  299 (973)
                             +++|+++++++|+++++ + .++++++|+.|+|++|+|+.+ + .|.++++|++|+|+
T Consensus       155 -------l~~L~~l~l~~n~l~~i-~-~l~~l~~L~~L~Ls~N~i~~l-~-~l~~l~~L~~L~Ls  208 (210)
T d1h6ta2         155 -------LTKLDTLSLEDNQISDI-V-PLAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLELF  208 (210)
T ss_dssp             -------CTTCSEEECCSSCCCCC-G-GGTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEEEE
T ss_pred             -------ccccccccccccccccc-c-cccCCCCCCEEECCCCCCCCC-h-hhcCCCCCCEEEcc
Confidence                   45555555555555532 1 255555555555555555543 1 35555555555554


No 85 
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.70  E-value=4.4e-17  Score=162.61  Aligned_cols=118  Identities=25%  Similarity=0.410  Sum_probs=58.8

Q ss_pred             EecCCCCCCCCCcccccccCCcEEEccCCCCCCCCCccccCCCCCccEEEeeCcccCCCCCccccCCCCCCeEEccCccc
Q 048430           75 NISGNSFYDTLPNELWHMRRLKIIDFSSNSLSGSLPGDMCNSFTQLESFDVSSNKITGEFPSAIVNISSLKSIRLDNNSL  154 (973)
Q Consensus        75 ~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l  154 (973)
                      .++.+.+.+.+  ....+.++++|++++|.+. .++.  ++.+++|++|+|++|++++..|  ++++++|++|++++|.+
T Consensus        24 ~l~~~~~~~~~--~~~~l~~l~~L~l~~~~i~-~l~~--l~~l~nL~~L~Ls~N~l~~~~~--l~~l~~L~~L~l~~n~~   96 (199)
T d2omxa2          24 VLGKTNVTDTV--SQTDLDQVTTLQADRLGIK-SIDG--VEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQI   96 (199)
T ss_dssp             HTTCSSTTSEE--CHHHHTTCCEEECTTSCCC-CCTT--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCC
T ss_pred             HhCCCCCCCcc--CHHHhcCCCEEECCCCCCC-Cccc--cccCCCcCcCccccccccCccc--ccCCccccccccccccc
Confidence            34444444332  2234555556666666555 3432  2445566666666666553221  55556666666666555


Q ss_pred             cccCCccccCCCCCccEEEcccccccccCCCCCCCccccCCCCccEEEecCCccc
Q 048430          155 SGSFPTDLCTRLPSLVQLRLLGNNITGRIPNREIPNEIGNLHNLKILDLGGNNIA  209 (973)
Q Consensus       155 ~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~p~~l~~l~~L~~L~L~~N~l~  209 (973)
                      . .++.  +..++.|+.|++++|.+..       ...+..+++|+.|++++|++.
T Consensus        97 ~-~~~~--l~~l~~L~~L~l~~~~~~~-------~~~~~~l~~L~~L~l~~n~l~  141 (199)
T d2omxa2          97 A-DITP--LANLTNLTGLTLFNNQITD-------IDPLKNLTNLNRLELSSNTIS  141 (199)
T ss_dssp             C-CCGG--GTTCTTCSEEECCSSCCCC-------CGGGTTCTTCSEEECCSSCCC
T ss_pred             c-cccc--ccccccccccccccccccc-------ccccchhhhhHHhhhhhhhhc
Confidence            4 3332  3445555555555555431       122444555555555555554


No 86 
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.70  E-value=4.9e-17  Score=163.77  Aligned_cols=181  Identities=23%  Similarity=0.356  Sum_probs=140.3

Q ss_pred             EecCCCCCCCcCCCCCCCCCCCcEEEecCCCCCCCCCcccccccCCcEEEccCCCCCCCCCccccCCCCCccEEEeeCcc
Q 048430           50 LSLPNLSLGGTLPPHVGNLSFLVSLNISGNSFYDTLPNELWHMRRLKIIDFSSNSLSGSLPGDMCNSFTQLESFDVSSNK  129 (973)
Q Consensus        50 l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~~l~~L~~L~Ls~N~  129 (973)
                      .++....+++.++.  ..|..|++|++++|.+.+ ++ .+..+++|++|+|++|+++ .++.  ++.+++|++|++++|+
T Consensus        29 ~~l~~~~~~~~~~~--~~L~~L~~L~l~~~~i~~-l~-~l~~l~~L~~L~L~~n~i~-~l~~--~~~l~~L~~L~l~~n~  101 (210)
T d1h6ta2          29 DNLKKKSVTDAVTQ--NELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLT-DIKP--LANLKNLGWLFLDENK  101 (210)
T ss_dssp             HHTTCSCTTSEECH--HHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCC-CCGG--GTTCTTCCEEECCSSC
T ss_pred             HHhCcCccCCccCH--HHhcCccEEECcCCCCCC-ch-hHhhCCCCCEEeCCCcccc-Cccc--cccCcccccccccccc
Confidence            45666666666553  467889999999999964 33 4889999999999999998 4654  4789999999999999


Q ss_pred             cCCCCCccccCCCCCCeEEccCccccccCCccccCCCCCccEEEcccccccccCCCCCCCccccCCCCccEEEecCCccc
Q 048430          130 ITGEFPSAIVNISSLKSIRLDNNSLSGSFPTDLCTRLPSLVQLRLLGNNITGRIPNREIPNEIGNLHNLKILDLGGNNIA  209 (973)
Q Consensus       130 l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~p~~l~~l~~L~~L~L~~N~l~  209 (973)
                      +++ +| .+.++++|+.|++++|.+. .++  .+..+++|+.+++++|.+++       +..+..+++|+++++++|+++
T Consensus       102 i~~-l~-~l~~l~~L~~L~l~~~~~~-~~~--~l~~l~~l~~l~~~~n~l~~-------~~~~~~l~~L~~l~l~~n~l~  169 (210)
T d1h6ta2         102 VKD-LS-SLKDLKKLKSLSLEHNGIS-DIN--GLVHLPQLESLYLGNNKITD-------ITVLSRLTKLDTLSLEDNQIS  169 (210)
T ss_dssp             CCC-GG-GGTTCTTCCEEECTTSCCC-CCG--GGGGCTTCCEEECCSSCCCC-------CGGGGGCTTCSEEECCSSCCC
T ss_pred             ccc-cc-ccccccccccccccccccc-ccc--cccccccccccccccccccc-------ccccccccccccccccccccc
Confidence            984 55 5899999999999999987 554  34678999999999999963       345788999999999999998


Q ss_pred             CccccccccCCcceeEEeecccccccCCCCCCccccceeeeccccccccCcchhcccCcccEEEecc
Q 048430          210 GLIPSMIFNNSNMVAILLYGNHLSGHLPSSIYLPNLENLFLWKNNLSGIIPDSICNASEATILELSS  276 (973)
Q Consensus       210 ~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~  276 (973)
                      +..+  +.+                       +++|++|+|++|+|+.+ + .+..+++|++|+|++
T Consensus       170 ~i~~--l~~-----------------------l~~L~~L~Ls~N~i~~l-~-~l~~l~~L~~L~Ls~  209 (210)
T d1h6ta2         170 DIVP--LAG-----------------------LTKLQNLYLSKNHISDL-R-ALAGLKNLDVLELFS  209 (210)
T ss_dssp             CCGG--GTT-----------------------CTTCCEEECCSSCCCBC-G-GGTTCTTCSEEEEEE
T ss_pred             cccc--ccC-----------------------CCCCCEEECCCCCCCCC-h-hhcCCCCCCEEEccC
Confidence            6432  555                       56666666666666643 3 466677777777653


No 87 
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.68  E-value=9.6e-17  Score=160.15  Aligned_cols=161  Identities=26%  Similarity=0.377  Sum_probs=86.1

Q ss_pred             CCCCCEEEccCCcCCCCCchhhhccCcCCeeecCCccccCcCcccccCcCCCCeeeccCCCCCCCCcccccccccccEEE
Q 048430          394 LQKLQGLDLNSNKLKGFIPTDLCKLEKLNTLLSNNNALQGQIPTCLANLTSLRHLDFRSNSLNSTIPSTFWSLKYILAVD  473 (973)
Q Consensus       394 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~  473 (973)
                      +.++++|++++|.+.. + +.+..+++|++|++++|++++..+  ++++++|++|++++|.+... + .+..++.|+.|+
T Consensus        39 l~~l~~L~l~~~~i~~-l-~~l~~l~nL~~L~Ls~N~l~~~~~--l~~l~~L~~L~l~~n~~~~~-~-~l~~l~~L~~L~  112 (199)
T d2omxa2          39 LDQVTTLQADRLGIKS-I-DGVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADI-T-PLANLTNLTGLT  112 (199)
T ss_dssp             HTTCCEEECTTSCCCC-C-TTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC-G-GGTTCTTCSEEE
T ss_pred             hcCCCEEECCCCCCCC-c-cccccCCCcCcCccccccccCccc--ccCCcccccccccccccccc-c-cccccccccccc
Confidence            3445555555555542 1 124445555555555555543322  44555555555555555422 1 244555555555


Q ss_pred             ecCCcccCCcCcCccCCCCCCeEEccCCcCcccCCcccccCCcCCEEEcccCccccCCCCCcccccccccccccccccCC
Q 048430          474 FSLNSLSGSLPLNIGNLEALGGLNLTGNQLSGYIPSSIGNLKNLDWLALARNAFQGPIPQSFGSLISLQSLDLSGNNISG  553 (973)
Q Consensus       474 ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~  553 (973)
                      +++|.+...  ..+..+++|+.|++++|++. .++ .+..+++|+.|++++|++++. + .|+++++|++|+|++|+++.
T Consensus       113 l~~~~~~~~--~~~~~l~~L~~L~l~~n~l~-~~~-~l~~~~~L~~L~l~~n~l~~l-~-~l~~l~~L~~L~ls~N~i~~  186 (199)
T d2omxa2         113 LFNNQITDI--DPLKNLTNLNRLELSSNTIS-DIS-ALSGLTSLQQLNFSSNQVTDL-K-PLANLTTLERLDISSNKVSD  186 (199)
T ss_dssp             CCSSCCCCC--GGGTTCTTCSEEECCSSCCC-CCG-GGTTCTTCSEEECCSSCCCCC-G-GGTTCTTCCEEECCSSCCCC
T ss_pred             ccccccccc--cccchhhhhHHhhhhhhhhc-ccc-cccccccccccccccccccCC-c-cccCCCCCCEEECCCCCCCC
Confidence            555555432  22555666666666666665 222 456666666666666666643 2 26666677777777776663


Q ss_pred             CCCcccccccccccc
Q 048430          554 EIPKSLEKLSRLVDF  568 (973)
Q Consensus       554 ~~p~~~~~l~~L~~l  568 (973)
                       ++ .++++++|+.|
T Consensus       187 -i~-~l~~L~~L~~L  199 (199)
T d2omxa2         187 -IS-VLAKLTNLESL  199 (199)
T ss_dssp             -CG-GGGGCTTCSEE
T ss_pred             -Cc-cccCCCCCCcC
Confidence             33 35566665543


No 88 
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.54  E-value=4.2e-16  Score=164.74  Aligned_cols=211  Identities=17%  Similarity=0.181  Sum_probs=103.9

Q ss_pred             CCccEEEeeCcccCCC-CCccccCCCCCCeEEccCccccccCCccccCCCCCccEEEcccc-cccccCCCCCCCccccCC
Q 048430          118 TQLESFDVSSNKITGE-FPSAIVNISSLKSIRLDNNSLSGSFPTDLCTRLPSLVQLRLLGN-NITGRIPNREIPNEIGNL  195 (973)
Q Consensus       118 ~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~L~~N-~l~~~~~~~~~p~~l~~l  195 (973)
                      .+|++|||++|.+++. ++..+.++++|++|+|++|.+++..+..+ ..+++|++|+|+++ .++..    .+..-...+
T Consensus        46 ~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~~~l~~~~~~~l-~~~~~L~~L~Ls~c~~itd~----~l~~l~~~~  120 (284)
T d2astb2          46 FRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTL-AKNSNLVRLNLSGCSGFSEF----ALQTLLSSC  120 (284)
T ss_dssp             BCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHH-TTCTTCSEEECTTCBSCCHH----HHHHHHHHC
T ss_pred             CCCCEEECCCCccCHHHHHHHHHhCCCcccccccccCCCcHHHHHH-hcCCCCcCcccccccccccc----ccchhhHHH
Confidence            3455555555544421 22234445555555555555443333222 33455555555552 33210    011112345


Q ss_pred             CCccEEEecCC-cccCc-ccccccc-CCcceeEEeeccc--ccc-cCCCC-CCccccceeeeccc-cccccCcchhcccC
Q 048430          196 HNLKILDLGGN-NIAGL-IPSMIFN-NSNMVAILLYGNH--LSG-HLPSS-IYLPNLENLFLWKN-NLSGIIPDSICNAS  267 (973)
Q Consensus       196 ~~L~~L~L~~N-~l~~~-~~~~~~~-~~~L~~L~l~~n~--l~~-~~~~~-~~l~~L~~L~L~~N-~l~~~~~~~l~~l~  267 (973)
                      ++|++|+++++ .++.. +...+.. .++|+.|+++++.  ++. .+... ..+++|++|++++| .+++.....+..++
T Consensus       121 ~~L~~L~ls~c~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~i~~~~l~~l~~~~~~L~~L~L~~~~~itd~~~~~l~~~~  200 (284)
T d2astb2         121 SRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLN  200 (284)
T ss_dssp             TTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCT
T ss_pred             HhccccccccccccccccchhhhcccccccchhhhcccccccccccccccccccccccccccccccCCCchhhhhhcccC
Confidence            55666666554 23211 1111222 2345555554431  211 11111 12677888888775 46666666777778


Q ss_pred             cccEEEeccc-cccccCCCcccccccceEEEccCCcCCCCCCCcchhhhhhhccCCcCcEEEccCCCCCCCCCCccc
Q 048430          268 EATILELSSN-LFSGLVPNTFGNCRQLQILSLGDNQLTTGSSAQGQIFYSSLAKCRYLRVLVLDTNPLKGVIPNSIG  343 (973)
Q Consensus       268 ~L~~L~L~~N-~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~  343 (973)
                      +|++|+|++| .+++.....++++++|+.|+++++ ++.   ..   .......+++|+   +..+.++...++.++
T Consensus       201 ~L~~L~L~~C~~i~~~~l~~L~~~~~L~~L~l~~~-~~d---~~---l~~l~~~lp~L~---i~~~~ls~~~~~~~~  267 (284)
T d2astb2         201 YLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI-VPD---GT---LQLLKEALPHLQ---INCSHFTTIARPTIG  267 (284)
T ss_dssp             TCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS-SCT---TC---HHHHHHHSTTSE---ESCCCSCCTTCSSCS
T ss_pred             cCCEEECCCCCCCChHHHHHHhcCCCCCEEeeeCC-CCH---HH---HHHHHHhCcccc---ccCccCCCCCCCccC
Confidence            8888888874 566655566777788888888776 322   10   111123345544   456666665555544


No 89 
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.52  E-value=6e-15  Score=140.80  Aligned_cols=125  Identities=18%  Similarity=0.314  Sum_probs=59.3

Q ss_pred             cccCCcEEEccCCCCCCCCCccccCCCCCccEEEeeCcccCCCCCccccCCCCCCeEEccCccccccCCccccCCCCCcc
Q 048430           91 HMRRLKIIDFSSNSLSGSLPGDMCNSFTQLESFDVSSNKITGEFPSAIVNISSLKSIRLDNNSLSGSFPTDLCTRLPSLV  170 (973)
Q Consensus        91 ~l~~L~~L~Ls~n~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~  170 (973)
                      +..+|+.|||++|+|+ .+| .++..+++|++|||++|+|+. ++ .|..+++|++|++++|+++ .+|..++..+++|+
T Consensus        16 n~~~lr~L~L~~n~I~-~i~-~~~~~l~~L~~L~Ls~N~i~~-l~-~~~~l~~L~~L~ls~N~i~-~l~~~~~~~l~~L~   90 (162)
T d1a9na_          16 NAVRDRELDLRGYKIP-VIE-NLGATLDQFDAIDFSDNEIRK-LD-GFPLLRRLKTLLVNNNRIC-RIGEGLDQALPDLT   90 (162)
T ss_dssp             CTTSCEEEECTTSCCC-SCC-CGGGGTTCCSEEECCSSCCCE-EC-CCCCCSSCCEEECCSSCCC-EECSCHHHHCTTCC
T ss_pred             CcCcCcEEECCCCCCC-ccC-ccccccccCCEEECCCCCCCc-cC-CcccCcchhhhhccccccc-CCCccccccccccc
Confidence            4444455555555554 343 223344555555555555542 22 3445555555555555554 44444444455555


Q ss_pred             EEEcccccccccCCCCCCC--ccccCCCCccEEEecCCcccCcc---ccccccCCcceeEE
Q 048430          171 QLRLLGNNITGRIPNREIP--NEIGNLHNLKILDLGGNNIAGLI---PSMIFNNSNMVAIL  226 (973)
Q Consensus       171 ~L~L~~N~l~~~~~~~~~p--~~l~~l~~L~~L~L~~N~l~~~~---~~~~~~~~~L~~L~  226 (973)
                      +|++++|+|+.      ++  ..+..+++|++|++++|.++...   +..+..+++|+.|+
T Consensus        91 ~L~L~~N~i~~------~~~l~~l~~l~~L~~L~l~~N~i~~~~~~r~~~i~~lp~L~~LD  145 (162)
T d1a9na_          91 ELILTNNSLVE------LGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLD  145 (162)
T ss_dssp             EEECCSCCCCC------GGGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEET
T ss_pred             cceeccccccc------cccccccccccccchhhcCCCccccccchHHHHHHHCCCcCeeC
Confidence            55555555531      12  23455555555555555554321   12344455555544


No 90 
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.51  E-value=5.4e-15  Score=156.03  Aligned_cols=183  Identities=17%  Similarity=0.154  Sum_probs=97.6

Q ss_pred             Cccccceeeecccccccc-CcchhcccCcccEEEeccccccccCCCcccccccceEEEccCC-cCCCCCCCcchhhhhhh
Q 048430          241 YLPNLENLFLWKNNLSGI-IPDSICNASEATILELSSNLFSGLVPNTFGNCRQLQILSLGDN-QLTTGSSAQGQIFYSSL  318 (973)
Q Consensus       241 ~l~~L~~L~L~~N~l~~~-~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N-~l~~~~~~~~~~~~~~l  318 (973)
                      ...+|++|++++|.+... +...+..+++|++|+|++|.+++..+..++.+++|++|+++++ .++.      .-....+
T Consensus        44 ~~~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~Ls~c~~itd------~~l~~l~  117 (284)
T d2astb2          44 SPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSE------FALQTLL  117 (284)
T ss_dssp             CCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCH------HHHHHHH
T ss_pred             cCCCCCEEECCCCccCHHHHHHHHHhCCCcccccccccCCCcHHHHHHhcCCCCcCccccccccccc------cccchhh
Confidence            356777888887777543 3345666777788888777777666666777777777777774 3432      1111223


Q ss_pred             ccCCcCcEEEccCCC-CCCC-CCCcccccccccceeecccCCccccCCCCCCCCCcccEEEeecC--cccc-ccCcccCC
Q 048430          319 AKCRYLRVLVLDTNP-LKGV-IPNSIGNLSTSLENFYAGSSQLSGGIPVGFGNLSNLLVLSLVNN--ELAG-AIPTVLGK  393 (973)
Q Consensus       319 ~~l~~L~~L~L~~N~-l~~~-~p~~~~~l~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n--~l~~-~~p~~~~~  393 (973)
                      ..+++|++|+++++. ++.. +...+                        ....++|+.|+++++  .++. .+...+..
T Consensus       118 ~~~~~L~~L~ls~c~~~~~~~~~~~~------------------------~~~~~~L~~L~l~~~~~~i~~~~l~~l~~~  173 (284)
T d2astb2         118 SSCSRLDELNLSWCFDFTEKHVQVAV------------------------AHVSETITQLNLSGYRKNLQKSDLSTLVRR  173 (284)
T ss_dssp             HHCTTCCEEECCCCTTCCHHHHHHHH------------------------HHSCTTCCEEECCSCGGGSCHHHHHHHHHH
T ss_pred             HHHHhccccccccccccccccchhhh------------------------cccccccchhhhcccccccccccccccccc
Confidence            456677777776642 2210 00000                        011245566666543  2221 12222344


Q ss_pred             CCCCCEEEccCCc-CCCCCchhhhccCcCCeeecCCc-cccCcCcccccCcCCCCeeeccCC
Q 048430          394 LQKLQGLDLNSNK-LKGFIPTDLCKLEKLNTLLSNNN-ALQGQIPTCLANLTSLRHLDFRSN  453 (973)
Q Consensus       394 l~~L~~L~Ls~N~-l~~~~~~~~~~l~~L~~L~l~~N-~l~~~~~~~~~~l~~L~~L~L~~N  453 (973)
                      +++|++|++++|. +++.....+.++++|++|++++| .+++.....++++++|+.|+++++
T Consensus       174 ~~~L~~L~L~~~~~itd~~~~~l~~~~~L~~L~L~~C~~i~~~~l~~L~~~~~L~~L~l~~~  235 (284)
T d2astb2         174 CPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI  235 (284)
T ss_dssp             CTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS
T ss_pred             cccccccccccccCCCchhhhhhcccCcCCEEECCCCCCCChHHHHHHhcCCCCCEEeeeCC
Confidence            5566666666543 44444445555555555555553 344444444555555555555554


No 91 
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.49  E-value=6e-14  Score=127.05  Aligned_cols=102  Identities=25%  Similarity=0.373  Sum_probs=58.3

Q ss_pred             cEEEecCCCCCCCCCcccccccCCcEEEccCCCCCCCCCccccCCCCCccEEEeeCcccCCCCCccccCCCCCCeEEccC
Q 048430           72 VSLNISGNSFYDTLPNELWHMRRLKIIDFSSNSLSGSLPGDMCNSFTQLESFDVSSNKITGEFPSAIVNISSLKSIRLDN  151 (973)
Q Consensus        72 ~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~  151 (973)
                      +.|+|++|+++ .+| .+.++++|++||+++|+++ .+|+.+ +.+++|++|++++|+|++ +| .++++++|++|++++
T Consensus         1 R~L~Ls~n~l~-~l~-~l~~l~~L~~L~ls~N~l~-~lp~~~-~~l~~L~~L~l~~N~i~~-l~-~~~~l~~L~~L~l~~   74 (124)
T d1dcea3           1 RVLHLAHKDLT-VLC-HLEQLLLVTHLDLSHNRLR-ALPPAL-AALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCN   74 (124)
T ss_dssp             SEEECTTSCCS-SCC-CGGGGTTCCEEECCSSCCC-CCCGGG-GGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCS
T ss_pred             CEEEcCCCCCC-CCc-ccccCCCCCEEECCCCccC-cchhhh-hhhhcccccccccccccc-cC-ccccccccCeEECCC
Confidence            35666666664 333 3566666666666666665 555443 456666666666666663 33 356666666666666


Q ss_pred             ccccccCCc-cccCCCCCccEEEccccccc
Q 048430          152 NSLSGSFPT-DLCTRLPSLVQLRLLGNNIT  180 (973)
Q Consensus       152 N~l~~~ip~-~~~~~l~~L~~L~L~~N~l~  180 (973)
                      |+|+ .+|. ..+..+++|++|++++|.++
T Consensus        75 N~i~-~~~~~~~l~~~~~L~~L~l~~N~i~  103 (124)
T d1dcea3          75 NRLQ-QSAAIQPLVSCPRLVLLNLQGNSLC  103 (124)
T ss_dssp             SCCC-SSSTTGGGGGCTTCCEEECTTSGGG
T ss_pred             CccC-CCCCchhhcCCCCCCEEECCCCcCC
Confidence            6665 3432 33445555555555555554


No 92 
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.49  E-value=4.8e-14  Score=127.66  Aligned_cols=104  Identities=20%  Similarity=0.392  Sum_probs=83.2

Q ss_pred             cEEEccCCCCCCCCCccccCCCCCccEEEeeCcccCCCCCccccCCCCCCeEEccCccccccCCccccCCCCCccEEEcc
Q 048430           96 KIIDFSSNSLSGSLPGDMCNSFTQLESFDVSSNKITGEFPSAIVNISSLKSIRLDNNSLSGSFPTDLCTRLPSLVQLRLL  175 (973)
Q Consensus        96 ~~L~Ls~n~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~L~  175 (973)
                      |.|||++|+++ .+|.  ++.+++|++||+++|+|+ .+|+.|+.+++|+.|++++|+|+ .+|.  +..+++|++|+++
T Consensus         1 R~L~Ls~n~l~-~l~~--l~~l~~L~~L~ls~N~l~-~lp~~~~~l~~L~~L~l~~N~i~-~l~~--~~~l~~L~~L~l~   73 (124)
T d1dcea3           1 RVLHLAHKDLT-VLCH--LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALE-NVDG--VANLPRLQELLLC   73 (124)
T ss_dssp             SEEECTTSCCS-SCCC--GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC-CCGG--GTTCSSCCEEECC
T ss_pred             CEEEcCCCCCC-CCcc--cccCCCCCEEECCCCccC-cchhhhhhhhccccccccccccc-ccCc--cccccccCeEECC
Confidence            57899999998 6764  578899999999999998 57878888999999999999998 6653  5678888888888


Q ss_pred             cccccccCCCCCCCccccCCCCccEEEecCCcccC
Q 048430          176 GNNITGRIPNREIPNEIGNLHNLKILDLGGNNIAG  210 (973)
Q Consensus       176 ~N~l~~~~~~~~~p~~l~~l~~L~~L~L~~N~l~~  210 (973)
                      +|+|+...    ....++.+++|++|++++|.++.
T Consensus        74 ~N~i~~~~----~~~~l~~~~~L~~L~l~~N~i~~  104 (124)
T d1dcea3          74 NNRLQQSA----AIQPLVSCPRLVLLNLQGNSLCQ  104 (124)
T ss_dssp             SSCCCSSS----TTGGGGGCTTCCEEECTTSGGGG
T ss_pred             CCccCCCC----CchhhcCCCCCCEEECCCCcCCc
Confidence            88886321    12457888888888888888863


No 93 
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.49  E-value=1.3e-14  Score=138.41  Aligned_cols=127  Identities=23%  Similarity=0.228  Sum_probs=94.6

Q ss_pred             ccCcCCCCeeeccCCCCCCCCcccccccccccEEEecCCcccCCcCcCccCCCCCCeEEccCCcCcccCCcccccCCcCC
Q 048430          439 LANLTSLRHLDFRSNSLNSTIPSTFWSLKYILAVDFSLNSLSGSLPLNIGNLEALGGLNLTGNQLSGYIPSSIGNLKNLD  518 (973)
Q Consensus       439 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~  518 (973)
                      +.+..+|++|+|++|+|+. ++..+..+++|+.||+++|+|+ .++ .+..+++|+.|++++|+++...+..+..+++|+
T Consensus        14 ~~n~~~lr~L~L~~n~I~~-i~~~~~~l~~L~~L~Ls~N~i~-~l~-~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~L~   90 (162)
T d1a9na_          14 YTNAVRDRELDLRGYKIPV-IENLGATLDQFDAIDFSDNEIR-KLD-GFPLLRRLKTLLVNNNRICRIGEGLDQALPDLT   90 (162)
T ss_dssp             EECTTSCEEEECTTSCCCS-CCCGGGGTTCCSEEECCSSCCC-EEC-CCCCCSSCCEEECCSSCCCEECSCHHHHCTTCC
T ss_pred             ccCcCcCcEEECCCCCCCc-cCccccccccCCEEECCCCCCC-ccC-CcccCcchhhhhcccccccCCCccccccccccc
Confidence            4566678888888888874 4666677788888888888887 443 477888888888888888855555567788888


Q ss_pred             EEEcccCccccCCC--CCcccccccccccccccccCCCCCc----ccccccccccccc
Q 048430          519 WLALARNAFQGPIP--QSFGSLISLQSLDLSGNNISGEIPK----SLEKLSRLVDFNV  570 (973)
Q Consensus       519 ~L~Ls~N~l~~~~p--~~~~~l~~L~~L~Ls~N~l~~~~p~----~~~~l~~L~~l~l  570 (973)
                      .|+|++|+|+. ++  ..+..+++|++|++++|.++. .|.    .+..+++|++||-
T Consensus        91 ~L~L~~N~i~~-~~~l~~l~~l~~L~~L~l~~N~i~~-~~~~r~~~i~~lp~L~~LD~  146 (162)
T d1a9na_          91 ELILTNNSLVE-LGDLDPLASLKSLTYLCILRNPVTN-KKHYRLYVIYKVPQVRVLDF  146 (162)
T ss_dssp             EEECCSCCCCC-GGGGGGGGGCTTCCEEECCSSGGGG-STTHHHHHHHHCTTCSEETT
T ss_pred             cceeccccccc-cccccccccccccchhhcCCCcccc-ccchHHHHHHHCCCcCeeCC
Confidence            88888888873 33  457788888888888888873 342    4677888888774


No 94 
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=99.49  E-value=6.9e-16  Score=168.50  Aligned_cols=252  Identities=16%  Similarity=0.180  Sum_probs=119.8

Q ss_pred             CcccccccceEEEccCCcCCCCCCCcchhhhhhhccCCcCcEEEccCCCCCCCC---CCcccccccccceeecccCCccc
Q 048430          285 NTFGNCRQLQILSLGDNQLTTGSSAQGQIFYSSLAKCRYLRVLVLDTNPLKGVI---PNSIGNLSTSLENFYAGSSQLSG  361 (973)
Q Consensus       285 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~---p~~~~~l~~~l~~l~l~~n~l~~  361 (973)
                      ..+.....|++|+|++|.+...   ....+...+...++|+.++++++......   |..+.                  
T Consensus        25 ~~L~~~~~l~~L~Ls~n~i~~~---~~~~l~~~l~~~~~L~~l~l~~~~~~~~~~~~~~~~~------------------   83 (344)
T d2ca6a1          25 AVLLEDDSVKEIVLSGNTIGTE---AARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALR------------------   83 (344)
T ss_dssp             HHHHHCSCCCEEECTTSEECHH---HHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHH------------------
T ss_pred             HHHhhCCCCCEEECcCCcCCHH---HHHHHHHHHHhCCCCCEEECCCCcccccccccchHHH------------------
Confidence            4456677788888888877531   11223345666777888887776554221   11111                  


Q ss_pred             cCCCCCCCCCcccEEEeecCccccc----cCcccCCCCCCCEEEccCCcCCCCCchhh-------------hccCcCCee
Q 048430          362 GIPVGFGNLSNLLVLSLVNNELAGA----IPTVLGKLQKLQGLDLNSNKLKGFIPTDL-------------CKLEKLNTL  424 (973)
Q Consensus       362 ~~p~~~~~l~~L~~L~Ls~n~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~-------------~~l~~L~~L  424 (973)
                      .+...+...++|++|+|++|.++..    +...+...++|++|++++|.+.......+             ...+.|+.+
T Consensus        84 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~~~~~~~~~~L~~l  163 (344)
T d2ca6a1          84 LLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSI  163 (344)
T ss_dssp             HHHHHHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEE
T ss_pred             HHHHHHhhCCCcccccccccccccccccchhhhhcccccchheecccccccccccccccccccccccccccccCccccee
Confidence            1112244556677777777776543    23334456677777777776642111111             123344555


Q ss_pred             ecCCccccCcC----cccccCcCCCCeeeccCCCCCCCCcccccccccccEEEecCCcccCCcCcCccCCCCCCeEEccC
Q 048430          425 LSNNNALQGQI----PTCLANLTSLRHLDFRSNSLNSTIPSTFWSLKYILAVDFSLNSLSGSLPLNIGNLEALGGLNLTG  500 (973)
Q Consensus       425 ~l~~N~l~~~~----~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~  500 (973)
                      .+++|.++...    ...+...+.|++|+|++|++...-.                   ...+...+..+++|+.|+|++
T Consensus       164 ~l~~n~i~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~g~-------------------~~~l~~~l~~~~~L~~L~Ls~  224 (344)
T d2ca6a1         164 ICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGI-------------------EHLLLEGLAYCQELKVLDLQD  224 (344)
T ss_dssp             ECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHH-------------------HHHHHTTGGGCTTCCEEECCS
T ss_pred             ecccccccccccccccchhhhhhhhccccccccccccccc-------------------ccchhhhhcchhhhccccccc
Confidence            55555443221    1122334445555555554431100                   001122344445555555555


Q ss_pred             CcCccc----CCcccccCCcCCEEEcccCccccCCCCCc----c--cccccccccccccccCCC----CCcccc-ccccc
Q 048430          501 NQLSGY----IPSSIGNLKNLDWLALARNAFQGPIPQSF----G--SLISLQSLDLSGNNISGE----IPKSLE-KLSRL  565 (973)
Q Consensus       501 N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~----~--~l~~L~~L~Ls~N~l~~~----~p~~~~-~l~~L  565 (973)
                      |.++..    +...+..+++|++|+|++|.|++.....+    .  ....|++|||++|+|+..    +...+. ++++|
T Consensus       225 N~i~~~g~~~L~~~l~~~~~L~~L~Ls~n~i~~~g~~~l~~~l~~~~~~~L~~L~ls~N~i~~~~~~~l~~~l~~~~~~L  304 (344)
T d2ca6a1         225 NTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDL  304 (344)
T ss_dssp             SCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTC
T ss_pred             ccccccccccccccccccccchhhhhhcCccCchhhHHHHHHhhhccCCCCCEEECCCCcCChHHHHHHHHHHHccCCCC
Confidence            555421    22334455555555555555543211111    1  123455666666655432    122222 34556


Q ss_pred             cccccCCCccc
Q 048430          566 VDFNVSFNGLE  576 (973)
Q Consensus       566 ~~l~ls~N~l~  576 (973)
                      +.|++++|.+.
T Consensus       305 ~~L~l~~N~~~  315 (344)
T d2ca6a1         305 LFLELNGNRFS  315 (344)
T ss_dssp             CEEECTTSBSC
T ss_pred             CEEECCCCcCC
Confidence            66666666553


No 95 
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=99.46  E-value=2.9e-15  Score=163.39  Aligned_cols=199  Identities=17%  Similarity=0.157  Sum_probs=106.2

Q ss_pred             chhcccCcccEEEecccccccc----CCCcccccccceEEEccCCcCCCCCCCc---chhhhhhhccCCcCcEEEccCCC
Q 048430          261 DSICNASEATILELSSNLFSGL----VPNTFGNCRQLQILSLGDNQLTTGSSAQ---GQIFYSSLAKCRYLRVLVLDTNP  333 (973)
Q Consensus       261 ~~l~~l~~L~~L~L~~N~i~~~----~~~~~~~l~~L~~L~L~~N~l~~~~~~~---~~~~~~~l~~l~~L~~L~L~~N~  333 (973)
                      ..+.....|+.|+|++|.|...    +...+...++|+.|+++++.........   ...+...+..+++|+.|+|++|.
T Consensus        25 ~~L~~~~~l~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~l~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~L~~L~L~~n~  104 (344)
T d2ca6a1          25 AVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNA  104 (344)
T ss_dssp             HHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCC
T ss_pred             HHHhhCCCCCEEECcCCcCCHHHHHHHHHHHHhCCCCCEEECCCCcccccccccchHHHHHHHHHhhCCCcccccccccc
Confidence            4455556666666666665422    1223455566666666666544322111   12234445566777777777776


Q ss_pred             CCCCCCCcccccccccceeecccCCccccCCCCCCCCCcccEEEeecCccccccCc-------------ccCCCCCCCEE
Q 048430          334 LKGVIPNSIGNLSTSLENFYAGSSQLSGGIPVGFGNLSNLLVLSLVNNELAGAIPT-------------VLGKLQKLQGL  400 (973)
Q Consensus       334 l~~~~p~~~~~l~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~-------------~~~~l~~L~~L  400 (973)
                      +.......+.                     ..+...++|++|++++|.+......             .....+.|+.+
T Consensus       105 i~~~~~~~l~---------------------~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~~~~~~~~~~L~~l  163 (344)
T d2ca6a1         105 FGPTAQEPLI---------------------DFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSI  163 (344)
T ss_dssp             CCTTTHHHHH---------------------HHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEE
T ss_pred             cccccccchh---------------------hhhcccccchheecccccccccccccccccccccccccccccCccccee
Confidence            6543111111                     1123345667777777665421110             11345667777


Q ss_pred             EccCCcCCCCC----chhhhccCcCCeeecCCccccCc-----CcccccCcCCCCeeeccCCCCCCC----Ccccccccc
Q 048430          401 DLNSNKLKGFI----PTDLCKLEKLNTLLSNNNALQGQ-----IPTCLANLTSLRHLDFRSNSLNST----IPSTFWSLK  467 (973)
Q Consensus       401 ~Ls~N~l~~~~----~~~~~~l~~L~~L~l~~N~l~~~-----~~~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~  467 (973)
                      ++++|++....    ...+...+.|+.|++++|.+...     +...+..+++|+.|+|++|.++..    +...+...+
T Consensus       164 ~l~~n~i~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~~~l~~~~  243 (344)
T d2ca6a1         164 ICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWP  243 (344)
T ss_dssp             ECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCT
T ss_pred             ecccccccccccccccchhhhhhhhcccccccccccccccccchhhhhcchhhhcccccccccccccccccccccccccc
Confidence            77777776332    23344567788888888877642     233456667777777777776421    222334444


Q ss_pred             cccEEEecCCccc
Q 048430          468 YILAVDFSLNSLS  480 (973)
Q Consensus       468 ~L~~L~ls~N~l~  480 (973)
                      +|++|++++|.|+
T Consensus       244 ~L~~L~Ls~n~i~  256 (344)
T d2ca6a1         244 NLRELGLNDCLLS  256 (344)
T ss_dssp             TCCEEECTTCCCC
T ss_pred             cchhhhhhcCccC
Confidence            5555555555544


No 96 
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=99.32  E-value=3.4e-14  Score=140.56  Aligned_cols=114  Identities=23%  Similarity=0.246  Sum_probs=53.5

Q ss_pred             CCccccCCCCCCeEEccCccccccCCccccCCCCCccEEEcccccccccCCCCCCCccccCCCCccEEEecCCcccCccc
Q 048430          134 FPSAIVNISSLKSIRLDNNSLSGSFPTDLCTRLPSLVQLRLLGNNITGRIPNREIPNEIGNLHNLKILDLGGNNIAGLIP  213 (973)
Q Consensus       134 ~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~  213 (973)
                      +|.++..+++|++|+|++|+|+ .++.  +..+++|++|+|++|+|+      .+|..+..+++|++|++++|+|+.. +
T Consensus        40 l~~sl~~L~~L~~L~Ls~n~I~-~i~~--l~~l~~L~~L~Ls~N~i~------~i~~~~~~~~~L~~L~l~~N~i~~l-~  109 (198)
T d1m9la_          40 MDATLSTLKACKHLALSTNNIE-KISS--LSGMENLRILSLGRNLIK------KIENLDAVADTLEELWISYNQIASL-S  109 (198)
T ss_dssp             CHHHHHHTTTCCEEECSEEEES-CCCC--HHHHTTCCEEECCEEEEC------SCSSHHHHHHHCCEEECSEEECCCH-H
T ss_pred             hhhHHhcccccceeECcccCCC-Cccc--ccCCccccChhhcccccc------ccccccccccccccccccccccccc-c
Confidence            3445555555555555555555 3431  234445555555555543      2333333334455555555554421 1


Q ss_pred             cccccCCcceeEEeecccccccCCCCCCccccceeeeccccccccCc-chhcccCcccEEEeccccccc
Q 048430          214 SMIFNNSNMVAILLYGNHLSGHLPSSIYLPNLENLFLWKNNLSGIIP-DSICNASEATILELSSNLFSG  281 (973)
Q Consensus       214 ~~~~~~~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~l~~l~~L~~L~L~~N~i~~  281 (973)
                       .+..                       +++|++|++++|+|+.... +.+..+++|+.|+|++|++..
T Consensus       110 -~~~~-----------------------l~~L~~L~L~~N~i~~~~~~~~l~~l~~L~~L~L~~N~l~~  154 (198)
T d1m9la_         110 -GIEK-----------------------LVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYN  154 (198)
T ss_dssp             -HHHH-----------------------HHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSSHHHH
T ss_pred             -cccc-----------------------cccccccccccchhccccccccccCCCccceeecCCCcccc
Confidence             1222                       4455555555555543211 234555555555555555543


No 97 
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=99.29  E-value=7.4e-14  Score=138.08  Aligned_cols=114  Identities=21%  Similarity=0.276  Sum_probs=62.2

Q ss_pred             CchhhhccCcCCeeecCCccccCcCcccccCcCCCCeeeccCCCCCCCCcccccccccccEEEecCCcccCCcCcCccCC
Q 048430          411 IPTDLCKLEKLNTLLSNNNALQGQIPTCLANLTSLRHLDFRSNSLNSTIPSTFWSLKYILAVDFSLNSLSGSLPLNIGNL  490 (973)
Q Consensus       411 ~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l  490 (973)
                      ++..+..+++|+.|+|++|+|+.. + .+..+++|+.|+|++|+|+ .+|..+..+++|+.|++++|+++. ++ .+..+
T Consensus        40 l~~sl~~L~~L~~L~Ls~n~I~~i-~-~l~~l~~L~~L~Ls~N~i~-~i~~~~~~~~~L~~L~l~~N~i~~-l~-~~~~l  114 (198)
T d1m9la_          40 MDATLSTLKACKHLALSTNNIEKI-S-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-LS-GIEKL  114 (198)
T ss_dssp             CHHHHHHTTTCCEEECSEEEESCC-C-CHHHHTTCCEEECCEEEEC-SCSSHHHHHHHCCEEECSEEECCC-HH-HHHHH
T ss_pred             hhhHHhcccccceeECcccCCCCc-c-cccCCccccChhhcccccc-cccccccccccccccccccccccc-cc-ccccc
Confidence            344555556666666666665532 2 3555666666666666654 234444444555566666665552 22 24555


Q ss_pred             CCCCeEEccCCcCcccCC-cccccCCcCCEEEcccCcccc
Q 048430          491 EALGGLNLTGNQLSGYIP-SSIGNLKNLDWLALARNAFQG  529 (973)
Q Consensus       491 ~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~  529 (973)
                      ++|+.|+|++|+|+.... ..+..+++|+.|+|++|.+..
T Consensus       115 ~~L~~L~L~~N~i~~~~~~~~l~~l~~L~~L~L~~N~l~~  154 (198)
T d1m9la_         115 VNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYN  154 (198)
T ss_dssp             HHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSSHHHH
T ss_pred             ccccccccccchhccccccccccCCCccceeecCCCcccc
Confidence            666666666666652211 345566666666666666653


No 98 
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.26  E-value=8.8e-12  Score=117.61  Aligned_cols=92  Identities=21%  Similarity=0.193  Sum_probs=56.2

Q ss_pred             CCcccccccCCcEEEccCCC-CCCCCCccccCCCCCccEEEeeCcccCCCCCccccCCCCCCeEEccCccccccCCcccc
Q 048430           85 LPNELWHMRRLKIIDFSSNS-LSGSLPGDMCNSFTQLESFDVSSNKITGEFPSAIVNISSLKSIRLDNNSLSGSFPTDLC  163 (973)
Q Consensus        85 ~p~~~~~l~~L~~L~Ls~n~-l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~  163 (973)
                      +|..+..+++|+.|++++|+ ++ .++.+.|.++++|+.|+|++|+|+...|.+|.++++|++|+|++|+|+ .+|.++|
T Consensus        23 ~p~~l~~l~~l~~L~l~~n~~l~-~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~N~l~-~l~~~~~  100 (156)
T d2ifga3          23 SLHHLPGAENLTELYIENQQHLQ-HLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALE-SLSWKTV  100 (156)
T ss_dssp             TTTTSCSCSCCSEEECCSCSSCC-EECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCS-CCCSTTT
T ss_pred             CcccccCccccCeeecCCCcccc-ccCchhhccccccCcceeeccccCCcccccccccccccceeccCCCCc-ccChhhh
Confidence            34445555556666665443 44 566555666666666666666666555666667777777777777776 6666665


Q ss_pred             CCCCCccEEEcccccc
Q 048430          164 TRLPSLVQLRLLGNNI  179 (973)
Q Consensus       164 ~~l~~L~~L~L~~N~l  179 (973)
                      ..+ +|++|+|++|.+
T Consensus       101 ~~~-~l~~L~L~~Np~  115 (156)
T d2ifga3         101 QGL-SLQELVLSGNPL  115 (156)
T ss_dssp             CSC-CCCEEECCSSCC
T ss_pred             ccc-cccccccCCCcc
Confidence            433 456666666655


No 99 
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.24  E-value=7.8e-12  Score=117.98  Aligned_cols=67  Identities=27%  Similarity=0.296  Sum_probs=30.6

Q ss_pred             cCccCCCCCCeEEccCCcCcccCCcccccCCcCCEEEcccCccccCCCCCcccccccccccccccccC
Q 048430          485 LNIGNLEALGGLNLTGNQLSGYIPSSIGNLKNLDWLALARNAFQGPIPQSFGSLISLQSLDLSGNNIS  552 (973)
Q Consensus       485 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~  552 (973)
                      ..|.++++|+.|+|++|+|+...|..|..+++|+.|+|++|+|+...+..|.. .+|+.|+|++|.+.
T Consensus        50 ~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~-~~l~~L~L~~Np~~  116 (156)
T d2ifga3          50 RDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQG-LSLQELVLSGNPLH  116 (156)
T ss_dssp             GGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCSCCCSTTTCS-CCCCEEECCSSCCC
T ss_pred             hhhccccccCcceeeccccCCcccccccccccccceeccCCCCcccChhhhcc-ccccccccCCCccc
Confidence            33444444444555555544444444445555555555555554222222322 24555555555443


No 100
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.39  E-value=7.7e-09  Score=97.72  Aligned_cols=83  Identities=25%  Similarity=0.317  Sum_probs=49.1

Q ss_pred             ccCCCCCCeEEccCCcCccc--CCcccccCCcCCEEEcccCccccCCCCCcccccccccccccccccCCCCCc-------
Q 048430          487 IGNLEALGGLNLTGNQLSGY--IPSSIGNLKNLDWLALARNAFQGPIPQSFGSLISLQSLDLSGNNISGEIPK-------  557 (973)
Q Consensus       487 ~~~l~~L~~L~Ls~N~l~~~--~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-------  557 (973)
                      +..+++|++|+|++|+|+..  ++..+..+++|+.|+|++|.|+...+-.+....+|+.|+|++|.++.....       
T Consensus        61 ~~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~~l~~l~~l~~~~L~~L~L~~Npl~~~~~~~~~y~~~  140 (162)
T d1koha1          61 EENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLSDTFRDQSTYISA  140 (162)
T ss_dssp             HHHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCCCGGGHHHHTTCCCSSCCCTTSTTSSSSSSHHHHHHH
T ss_pred             HHhCCCCCEeeCCCccccCCchhHHHHhhCCcccccccccCccccchhhhhhhccccceeecCCCCcCcCcccchhHHHH
Confidence            34566677777777777632  233455667777777777777633222333344567777777777654442       


Q ss_pred             cccccccccccc
Q 048430          558 SLEKLSRLVDFN  569 (973)
Q Consensus       558 ~~~~l~~L~~l~  569 (973)
                      .+..+|+|+.||
T Consensus       141 i~~~~P~L~~LD  152 (162)
T d1koha1         141 IRERFPKLLRLD  152 (162)
T ss_dssp             HHTTSTTCCEET
T ss_pred             HHHHCCCCCEEC
Confidence            245567777665


No 101
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.31  E-value=3.7e-08  Score=92.90  Aligned_cols=67  Identities=25%  Similarity=0.185  Sum_probs=29.0

Q ss_pred             cccCcCCCCeeeccCCCCCCCC--cccccccccccEEEecCCcccCCcCcCccCCCCCCeEEccCCcCc
Q 048430          438 CLANLTSLRHLDFRSNSLNSTI--PSTFWSLKYILAVDFSLNSLSGSLPLNIGNLEALGGLNLTGNQLS  504 (973)
Q Consensus       438 ~~~~l~~L~~L~L~~N~l~~~~--p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~  504 (973)
                      .+.++++|++|+|++|+|+...  +..+..+++|+.||+++|+|+...+..+.....|+.|++++|.++
T Consensus        60 ~~~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~~l~~l~~l~~~~L~~L~L~~Npl~  128 (162)
T d1koha1          60 IEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLS  128 (162)
T ss_dssp             HHHHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCCCGGGHHHHTTCCCSSCCCTTSTTS
T ss_pred             HHHhCCCCCEeeCCCccccCCchhHHHHhhCCcccccccccCccccchhhhhhhccccceeecCCCCcC
Confidence            3345566666666666665421  223333444444444444444211111112223444455555444


No 102
>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}
Probab=98.26  E-value=1.9e-06  Score=88.19  Aligned_cols=150  Identities=16%  Similarity=0.128  Sum_probs=105.0

Q ss_pred             HHHHHHhcCCCCCccccccCceEEEEEEeCCCeEEEEEEEeccchhhHHHHHHHHHHHHhcc-CCceeEEEeeeecCCee
Q 048430          673 HELQQATNGFGESNLLGSGSFDNVYKATLANGVSVAVKVFNLQEDRALKSFDTECEVMRRIR-HRNLIKIVSSCSNPGFK  751 (973)
Q Consensus       673 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~  751 (973)
                      .++....+.|...+..+-++.+.||+.... ++.+++|+...........+.+|...+..+. +--+.+++.++..++..
T Consensus         7 ~~l~~~~~~~~~~~~~~G~s~~~v~rv~~~-~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~   85 (263)
T d1j7la_           7 PELKKLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWS   85 (263)
T ss_dssp             HHHHHHHTTSEEEECSCCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEE
T ss_pred             HHHHHhhhceEEEEcCCCCCCCcEEEEEeC-CCeEEEEEcCCCcccchhhHHHHHHHHHHHhccCCCCcEEEEEecCCce
Confidence            356666677776655444445789988754 5667788876554444456788888888774 43466778888888899


Q ss_pred             EEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhhc-----------------------------------
Q 048430          752 ALIMQYMPQGSLEKWLYSHNYSLTIRQRLDIMIDVASALEYLHHG-----------------------------------  796 (973)
Q Consensus       752 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~-----------------------------------  796 (973)
                      ++||+++++.++.+......      ....++.++++.++.||+.                                   
T Consensus        86 ~lv~~~l~G~~~~~~~~~~~------~~~~~~~~l~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (263)
T d1j7la_          86 NLLMSEADGVLCSEEYEDEQ------SPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWE  159 (263)
T ss_dssp             EEEEECCSSEEHHHHTTTCS------CHHHHHHHHHHHHHHHHTSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCCGGGGS
T ss_pred             EEEEEecccccccccccccc------cHHHHHHHHHHHHHHHhccCccccccCcchhhhhhhHHHHHHHHhhhhhhhccc
Confidence            99999999988766543221      2334566677777777731                                   


Q ss_pred             ---------------------CCCCeEEccCCCCcEEeCCCCcEEEeecccccc
Q 048430          797 ---------------------YSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAKL  829 (973)
Q Consensus       797 ---------------------~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~  829 (973)
                                           ....++|+|+.|.||++++++.+-++||+.+..
T Consensus       160 ~~~~~~~~~~~~~~l~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDwe~a~~  213 (263)
T d1j7la_         160 EDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR  213 (263)
T ss_dssp             TTCSCSSHHHHHHHHHHSCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred             ccccchHHHHHHHHHHhcCCcCCcEEEEeeccCcceeecCCceEEEeechhccc
Confidence                                 112378999999999999877777999998763


No 103
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=97.57  E-value=1.7e-05  Score=74.35  Aligned_cols=69  Identities=6%  Similarity=0.033  Sum_probs=40.0

Q ss_pred             ccCcccEEEecccccccc----CCCcccccccceEEEccCCcCCCCCCCcchhhhhhhccCCcCcEEEccCCC
Q 048430          265 NASEATILELSSNLFSGL----VPNTFGNCRQLQILSLGDNQLTTGSSAQGQIFYSSLAKCRYLRVLVLDTNP  333 (973)
Q Consensus       265 ~l~~L~~L~L~~N~i~~~----~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~  333 (973)
                      ..+.|+.|+|++|.|+..    +..++...++|++|++++|++..+.......+...+...+.|+.|+++.+.
T Consensus        70 ~n~~L~~L~L~~n~i~~~g~~~l~~aL~~n~sL~~L~l~~n~~~~~g~~~~~~l~~~L~~n~sL~~l~l~~~~  142 (167)
T d1pgva_          70 TSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFAS  142 (167)
T ss_dssp             HCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCC
T ss_pred             hcccccceeeehhhcchHHHHHHHHHHHhCCcCCEEECCCCcCCCccHHHHHHHHHHHHhCCCccEeeCcCCC
Confidence            344555555555555422    122345556677777777766554333334456667777888888876654


No 104
>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}
Probab=97.54  E-value=0.00011  Score=74.19  Aligned_cols=130  Identities=16%  Similarity=0.166  Sum_probs=86.7

Q ss_pred             cccccCc-eEEEEEEeCCCeEEEEEEEeccchhhHHHHHHHHHHHHhccC--CceeEEEeeeecCCeeEEEEEecCCCCH
Q 048430          687 LLGSGSF-DNVYKATLANGVSVAVKVFNLQEDRALKSFDTECEVMRRIRH--RNLIKIVSSCSNPGFKALIMQYMPQGSL  763 (973)
Q Consensus       687 ~lg~G~~-g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~l~~~~~~~~~~~lv~e~~~~gsL  763 (973)
                      .+..|.. +.||+....++..+++|......   ...+..|+..++.+..  -.+.++++++.+++..++|||+++|.++
T Consensus        17 ~~~~G~s~~~v~r~~~~~~~~~vlK~~~~~~---~~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~G~~~   93 (255)
T d1nd4a_          17 QQTIGCSDAAVFRLSAQGRPVLFVKTDLSGA---LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDL   93 (255)
T ss_dssp             ECSCTTSSCEEEEEECTTSCCEEEEEECSCT---TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEET
T ss_pred             EcCCcccCCeEEEEEeCCCCEEEEEeCCccC---HhHHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEeeecccc
Confidence            4455553 67999998888889999865432   2346778888877742  3366778888888889999999987654


Q ss_pred             HHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhh------------------------------------------------
Q 048430          764 EKWLYSHNYSLTIRQRLDIMIDVASALEYLHH------------------------------------------------  795 (973)
Q Consensus       764 ~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~------------------------------------------------  795 (973)
                      .+.      ..+.   ...+.++++.++-||.                                                
T Consensus        94 ~~~------~~~~---~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (255)
T d1nd4a_          94 LSS------HLAP---AEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFAR  164 (255)
T ss_dssp             TTS------CCCH---HHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHH
T ss_pred             ccc------cccH---HHHHHHHHHHHHHHccCChhhCCCcccchhhHHHHHHHHHHhhhccccccchhhhhHHHHHHHH
Confidence            321      0111   1122333334444441                                                


Q ss_pred             -------cCCCCeEEccCCCCcEEeCCCCcEEEeeccccc
Q 048430          796 -------GYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAK  828 (973)
Q Consensus       796 -------~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~  828 (973)
                             .....++|+|+.|.||+++++..+-|+||+.+.
T Consensus       165 l~~~~~~~~~~~liHgD~~~~Nvl~~~~~~~~iID~~~~~  204 (255)
T d1nd4a_         165 LKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG  204 (255)
T ss_dssp             HHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred             HHHhCCccCCceEEeCCCCCcceEEeCCceEEEEEchhcc
Confidence                   012237999999999999988777899999875


No 105
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=97.49  E-value=3.7e-05  Score=72.02  Aligned_cols=88  Identities=9%  Similarity=0.083  Sum_probs=56.2

Q ss_pred             CCCcccEEEeecC-ccccc----cCcccCCCCCCCEEEccCCcCCCC----CchhhhccCcCCeeecCCccccCcC----
Q 048430          369 NLSNLLVLSLVNN-ELAGA----IPTVLGKLQKLQGLDLNSNKLKGF----IPTDLCKLEKLNTLLSNNNALQGQI----  435 (973)
Q Consensus       369 ~l~~L~~L~Ls~n-~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~l~~N~l~~~~----  435 (973)
                      +.+.|++|+|+++ .++..    +...+...+.|++|+|++|.+...    +...+...+.|+.|++++|.++...    
T Consensus        13 n~~~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~~l   92 (167)
T d1pgva_          13 DDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARL   92 (167)
T ss_dssp             TCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHH
T ss_pred             CCCCCcEEEeCCCCCCCHHHHHHHHHHHhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcchHHHHHH
Confidence            4577888888864 45432    334566777888888888887632    2233445567777777777776532    


Q ss_pred             cccccCcCCCCeeeccCCCCC
Q 048430          436 PTCLANLTSLRHLDFRSNSLN  456 (973)
Q Consensus       436 ~~~~~~l~~L~~L~L~~N~l~  456 (973)
                      ...+...++|++|++++|++.
T Consensus        93 ~~aL~~n~sL~~L~l~~n~~~  113 (167)
T d1pgva_          93 LRSTLVTQSIVEFKADNQRQS  113 (167)
T ss_dssp             HHHTTTTCCCSEEECCCCSSC
T ss_pred             HHHHHhCCcCCEEECCCCcCC
Confidence            223455566777777777654


No 106
>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}
Probab=96.93  E-value=0.001  Score=71.41  Aligned_cols=76  Identities=12%  Similarity=0.148  Sum_probs=48.9

Q ss_pred             CccccccCceEEEEEEeC-CCeEEEEEEEeccc-------hhhHHHHHHHHHHHHhcc-C--CceeEEEeeeecCCeeEE
Q 048430          685 SNLLGSGSFDNVYKATLA-NGVSVAVKVFNLQE-------DRALKSFDTECEVMRRIR-H--RNLIKIVSSCSNPGFKAL  753 (973)
Q Consensus       685 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-------~~~~~~~~~e~~~l~~l~-h--~niv~l~~~~~~~~~~~l  753 (973)
                      .+.||.|....||+.... +++.|+||.-....       .........|++.++.+. +  ..+.+++.+.  ++..++
T Consensus        31 ~~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~d--~~~~~l  108 (392)
T d2pula1          31 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD--TEMAVT  108 (392)
T ss_dssp             EEECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEE--TTTTEE
T ss_pred             EEEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEEEc--CCCCEE
Confidence            457899999999999864 46789999653211       112334567888887763 2  3455666554  445678


Q ss_pred             EEEecCCCC
Q 048430          754 IMQYMPQGS  762 (973)
Q Consensus       754 v~e~~~~gs  762 (973)
                      |||++++..
T Consensus       109 vmE~L~~~~  117 (392)
T d2pula1         109 VMEDLSHLK  117 (392)
T ss_dssp             EECCCTTSE
T ss_pred             EEeccCCcc
Confidence            999997653


No 107
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=96.75  E-value=4.2e-05  Score=71.61  Aligned_cols=44  Identities=11%  Similarity=0.076  Sum_probs=18.7

Q ss_pred             ccccceEEEccCCcCCCCCCCcchhhhhhhccCCcCcEEEccCCCCC
Q 048430          289 NCRQLQILSLGDNQLTTGSSAQGQIFYSSLAKCRYLRVLVLDTNPLK  335 (973)
Q Consensus       289 ~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~  335 (973)
                      ..++|++|++++|.++..   ....+...+...+.++.+++++|.+.
T Consensus        44 ~n~~L~~L~Ls~n~l~~~---~~~~L~~~l~~~~~l~~l~l~~~~~~   87 (166)
T d1io0a_          44 TNTYVKKFSIVGTRSNDP---VAFALAEMLKVNNTLKSLNVESNFIS   87 (166)
T ss_dssp             TCCSCCEEECTTSCCCHH---HHHHHHHHHHHCSSCCEEECCSSCCC
T ss_pred             cCCccCeeeccCCcccHH---HHHHHHHHHhhcccchhhhhcccccc
Confidence            344455555555544321   11122233444455555555554443


No 108
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=96.60  E-value=0.00014  Score=67.87  Aligned_cols=11  Identities=18%  Similarity=0.277  Sum_probs=5.1

Q ss_pred             cccceEEEccC
Q 048430          290 CRQLQILSLGD  300 (973)
Q Consensus       290 l~~L~~L~L~~  300 (973)
                      .++|++|+|++
T Consensus        16 ~~~L~~L~L~~   26 (166)
T d1io0a_          16 DPDLEEVNLNN   26 (166)
T ss_dssp             CTTCCEEECTT
T ss_pred             CCCCcEEEcCC
Confidence            34444444443


No 109
>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}
Probab=96.55  E-value=0.0021  Score=66.87  Aligned_cols=134  Identities=11%  Similarity=0.133  Sum_probs=77.9

Q ss_pred             ceEEEEEEeCCCeEEEEEEEeccchhhHHHHHHHHHHHHhccCCce--eEEEe-----eeecCCeeEEEEEecCCCCH--
Q 048430          693 FDNVYKATLANGVSVAVKVFNLQEDRALKSFDTECEVMRRIRHRNL--IKIVS-----SCSNPGFKALIMQYMPQGSL--  763 (973)
Q Consensus       693 ~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni--v~l~~-----~~~~~~~~~lv~e~~~~gsL--  763 (973)
                      --.||++..++|+.|++|+.+... ...+++..|...+..+....+  +..+.     .+...+..+.|+++++|..+  
T Consensus        35 EN~vy~v~~~dg~~~VlK~~rp~~-~s~~~i~~E~~~l~~L~~~gipv~~p~~~~g~~~~~~~~~~~~l~~~~~G~~~~~  113 (325)
T d1zyla1          35 ENRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGGRQFEA  113 (325)
T ss_dssp             SSEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCCEECCS
T ss_pred             cceeEEEEcCCCCEEEEEEeCCCC-CCHHHHHHHHHHHHHHHhcCCCCCCceecCCCeeeeeeeEEEEEEeecCCcCCCC
Confidence            358999999999999999986542 234667888888888752222  11111     12345677889999876421  


Q ss_pred             ----------------HHHhhhC----CCCCC-------------------HHHHHHHHHHHHHHHHHhh----hcCCCC
Q 048430          764 ----------------EKWLYSH----NYSLT-------------------IRQRLDIMIDVASALEYLH----HGYSTP  800 (973)
Q Consensus       764 ----------------~~~l~~~----~~~l~-------------------~~~~~~i~~~i~~~L~~LH----~~~~~~  800 (973)
                                      +......    +...+                   ...+..+...+.+.++.+.    +....+
T Consensus       114 ~~~~~~~~lG~~LA~lH~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~p~~  193 (325)
T d1zyla1         114 DNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWREDFTVL  193 (325)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHCCSCSCCE
T ss_pred             CCHHHHHHHHHHHHHHHhhcccCCccccCCCCHHHHhhhhHHHHHHcCcCCHHHHHHHHHHHHHHHHHHHHhccccCCce
Confidence                            1111100    01111                   1111112222222333332    223456


Q ss_pred             eEEccCCCCcEEeCCCCcEEEeecccccc
Q 048430          801 IIHCDLKPNNVLLDDDMVAHLGDFGIAKL  829 (973)
Q Consensus       801 ivH~dlk~~Nill~~~~~~kl~Dfgla~~  829 (973)
                      +||+|+.+.|||++++  ..++||+.+..
T Consensus       194 liHgDlh~~NvL~~~~--~~~IDFdd~~~  220 (325)
T d1zyla1         194 RLHGDCHAGNILWRDG--PMFVDLDDARN  220 (325)
T ss_dssp             ECCSSCSGGGEEESSS--EEECCCTTCCE
T ss_pred             eecCCCCcccEEEeCC--ceEEechhccc
Confidence            8999999999999754  45899998864


No 110
>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}
Probab=96.17  E-value=0.0083  Score=61.86  Aligned_cols=157  Identities=14%  Similarity=0.142  Sum_probs=85.1

Q ss_pred             CCCHHHHHHHhcCCCCCcc-----ccccCceEEEEEEeCCCeEEEEEEEeccchhhHHHHHHHHHHHHhccCCce--eEE
Q 048430          669 RISYHELQQATNGFGESNL-----LGSGSFDNVYKATLANGVSVAVKVFNLQEDRALKSFDTECEVMRRIRHRNL--IKI  741 (973)
Q Consensus       669 ~~~~~~~~~~~~~~~~~~~-----lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni--v~l  741 (973)
                      ..+.++++....+|...+.     |..|---+.|+.+..+|+ +++|++....+  .++...|+.++..+...++  ...
T Consensus         2 ~ls~~el~~~l~~Y~lg~~~~~~~i~~G~~N~ny~v~t~~g~-yVLri~~~~~~--~~~l~~~~~~l~~L~~~g~pvp~p   78 (316)
T d2ppqa1           2 DITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKDP-LILTLYEKRVE--KNDLPFFLGLMQHLAAKGLSCPLP   78 (316)
T ss_dssp             CCCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSCC-EEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCB
T ss_pred             CCCHHHHHHHHHhCCCCCceEeecCCCCcccCeEEEEECCCc-EEEEEcCCCCC--HHHHHHHHHHHHhhhhcccccccc
Confidence            3566788888888876543     345666788999887664 88998854322  2345556667766642221  111


Q ss_pred             Ee------eeecCCeeEEEEEecCCCCHH--------------HHhhh----CC----CC------------------CC
Q 048430          742 VS------SCSNPGFKALIMQYMPQGSLE--------------KWLYS----HN----YS------------------LT  775 (973)
Q Consensus       742 ~~------~~~~~~~~~lv~e~~~~gsL~--------------~~l~~----~~----~~------------------l~  775 (973)
                      +.      +....+....++.+..+....              ..++.    ..    ..                  ..
T Consensus        79 i~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (316)
T d2ppqa1          79 LPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEV  158 (316)
T ss_dssp             CCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGT
T ss_pred             ceecCCCcceeeecccceeeeecccccccccchhHHHHHHHHHHhhhhhhhhcccccccccchhhcchhhhHHHHhhhhc
Confidence            11      112234556677776654211              00000    00    00                  00


Q ss_pred             HHHHHHHHHHHHHHHHHhh-hcCCCCeEEccCCCCcEEeCCCCcEEEeeccccc
Q 048430          776 IRQRLDIMIDVASALEYLH-HGYSTPIIHCDLKPNNVLLDDDMVAHLGDFGIAK  828 (973)
Q Consensus       776 ~~~~~~i~~~i~~~L~~LH-~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~  828 (973)
                      .......+..+...+.-.+ .....++||+|+.+.||+++.+...-++||+.+.
T Consensus       159 ~~~~~~~l~~~~~~~~~~~~~~L~~giIHgDl~~dNvl~~~~~v~gvIDF~~~~  212 (316)
T d2ppqa1         159 EKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC  212 (316)
T ss_dssp             STTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred             chhHHHHHHHHHHhhhccCccccccccccCCcchhhhhcccccceeEecccccc
Confidence            0111112222222222222 2345779999999999999998877899999876


No 111
>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}
Probab=95.58  E-value=0.013  Score=62.58  Aligned_cols=72  Identities=13%  Similarity=0.196  Sum_probs=49.2

Q ss_pred             CccccccCceEEEEEEeCC--------CeEEEEEEEeccchhhHHHHHHHHHHHHhcc-CCceeEEEeeeecCCeeEEEE
Q 048430          685 SNLLGSGSFDNVYKATLAN--------GVSVAVKVFNLQEDRALKSFDTECEVMRRIR-HRNLIKIVSSCSNPGFKALIM  755 (973)
Q Consensus       685 ~~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~  755 (973)
                      .+.|+.|-.-.+|+....+        .+.|.+++.. .... .....+|..+++.+. +.-..++++++.+    .+|+
T Consensus        47 v~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g-~~~~-~idr~~E~~i~~~ls~~gl~Pkll~~~~~----g~I~  120 (395)
T d1nw1a_          47 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYF-NPET-ESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLE  120 (395)
T ss_dssp             EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEEC-SCCC-HHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEE
T ss_pred             EEEcCCccccceEEEEeCCCCccccCCCCcEEEEecC-Ccch-hhHHHHHHHHHHHHHhCCCCCeEEEEcCC----ceEE
Confidence            3568888889999998653        3567777764 2222 245668999998885 4334577777753    5899


Q ss_pred             EecCCCC
Q 048430          756 QYMPQGS  762 (973)
Q Consensus       756 e~~~~gs  762 (973)
                      ||+++..
T Consensus       121 efi~g~~  127 (395)
T d1nw1a_         121 EYIPSRP  127 (395)
T ss_dssp             CCCCEEE
T ss_pred             EEecccc
Confidence            9998643


No 112
>d1ntya1 a.87.1.1 (A:1231-1414) Triple functional domain protein TRIO {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.77  E-value=46  Score=29.11  Aligned_cols=42  Identities=21%  Similarity=0.180  Sum_probs=33.9

Q ss_pred             HHHHHHHhccccCCCCCCCHHHHHHHHHHHHHHHHhhcccCC
Q 048430          932 YIMSLALKCSAEIPEERINVKDALADLKKIKKILTQALHLTK  973 (973)
Q Consensus       932 ~l~~l~~~cl~~~P~~Rpt~~evl~~L~~~~~~~~~~~~~~~  973 (973)
                      ...-++..++..-|++.|..+++++.++++.+...+.+|++.
T Consensus       142 rY~lLL~~llk~T~~~~~dl~~al~~i~~v~~~ine~~~~s~  183 (184)
T d1ntya1         142 KYQLLLKELLTCCEEGKGEIKDGLEVMLSVPKRANDAMHLSM  183 (184)
T ss_dssp             HHHHHHHHHHHTSCTTCTTHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            344455556666688899999999999999999999999873


Done!