Query 048431
Match_columns 396
No_of_seqs 183 out of 1684
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 16:26:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048431.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/048431hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3jur_A EXO-poly-alpha-D-galact 100.0 6.2E-64 2.1E-68 497.7 38.3 338 23-381 20-421 (448)
2 1rmg_A Rgase A, rhamnogalactur 100.0 1.1E-59 3.7E-64 465.6 40.6 333 26-386 16-357 (422)
3 1bhe_A PEHA, polygalacturonase 100.0 2.1E-58 7.3E-63 451.6 39.1 330 27-385 11-375 (376)
4 1czf_A Polygalacturonase II; b 100.0 8E-59 2.7E-63 450.3 33.1 322 28-384 27-358 (362)
5 2iq7_A Endopolygalacturonase; 100.0 3.8E-56 1.3E-60 429.2 33.5 319 45-385 6-334 (339)
6 2uvf_A Exopolygalacturonase; G 100.0 1E-55 3.6E-60 455.6 39.0 332 26-371 152-564 (608)
7 1nhc_A Polygalacturonase I; be 100.0 5E-56 1.7E-60 427.8 32.9 318 44-384 5-332 (336)
8 1ia5_A Polygalacturonase; glyc 100.0 1.7E-55 5.8E-60 424.3 34.5 315 46-384 11-335 (339)
9 1hg8_A Endopolygalacturonase; 100.0 2.6E-55 9E-60 424.3 35.7 318 46-384 7-345 (349)
10 1k5c_A Endopolygalacturonase; 100.0 6.9E-55 2.4E-59 418.5 24.9 310 47-385 8-330 (335)
11 2x6w_A Tail spike protein; vir 100.0 2.4E-47 8.2E-52 381.0 20.7 293 27-372 48-385 (600)
12 1x0c_A Isopullulanase; glycosi 100.0 2.7E-41 9.4E-46 342.4 16.6 300 35-370 147-520 (549)
13 1ogo_X Dextranase; hydrolase, 100.0 4.3E-39 1.5E-43 325.9 25.1 267 61-370 229-545 (574)
14 3gq8_A Preneck appendage prote 100.0 3E-38 1E-42 317.1 26.7 270 27-343 19-309 (609)
15 1h80_A IOTA-carrageenase; hydr 100.0 1.8E-37 6E-42 307.6 29.5 298 26-371 17-361 (464)
16 3gqn_A Preneck appendage prote 100.0 3.3E-38 1.1E-42 321.1 24.7 270 27-343 19-309 (772)
17 2pyg_A Poly(beta-D-mannuronate 100.0 8.1E-29 2.8E-33 242.8 27.7 298 30-371 2-360 (377)
18 2vbk_A Tailspike-protein; vira 100.0 8.8E-31 3E-35 248.8 11.6 211 28-276 49-287 (514)
19 3jur_A EXO-poly-alpha-D-galact 99.9 3.8E-25 1.3E-29 219.4 20.6 228 111-371 191-444 (448)
20 2uvf_A Exopolygalacturonase; G 99.9 3.9E-22 1.3E-26 205.5 26.8 247 111-394 332-608 (608)
21 3eqn_A Glucan 1,3-beta-glucosi 99.9 1.4E-21 4.8E-26 199.4 22.5 264 27-340 46-327 (758)
22 1ia5_A Polygalacturonase; glyc 99.9 5.2E-20 1.8E-24 176.9 28.5 203 152-380 66-307 (339)
23 1czf_A Polygalacturonase II; b 99.9 2.5E-20 8.5E-25 180.4 26.0 202 152-380 89-330 (362)
24 2iq7_A Endopolygalacturonase; 99.9 1E-19 3.6E-24 174.9 28.5 202 152-379 62-304 (339)
25 1nhc_A Polygalacturonase I; be 99.9 1.8E-19 6.1E-24 173.1 28.2 202 152-380 62-304 (336)
26 1bhe_A PEHA, polygalacturonase 99.9 2.3E-19 7.9E-24 175.1 27.3 218 88-343 110-364 (376)
27 1rmg_A Rgase A, rhamnogalactur 99.9 2.3E-18 7.7E-23 170.1 34.0 169 175-372 129-311 (422)
28 1k5c_A Endopolygalacturonase; 99.8 7.7E-19 2.6E-23 168.2 24.6 199 152-380 60-301 (335)
29 1hg8_A Endopolygalacturonase; 99.8 1.8E-18 6E-23 166.8 26.0 203 152-380 63-317 (349)
30 1x0c_A Isopullulanase; glycosi 99.8 1.3E-17 4.5E-22 169.0 21.9 250 61-343 220-521 (549)
31 1ogo_X Dextranase; hydrolase, 99.8 2.2E-17 7.6E-22 167.3 22.0 236 61-343 262-546 (574)
32 2inu_A Insulin fructotransfera 99.6 1.7E-14 5.9E-19 138.0 17.5 248 25-299 9-299 (410)
33 3gq8_A Preneck appendage prote 99.5 1.9E-11 6.4E-16 123.2 29.8 222 111-371 135-400 (609)
34 3gqn_A Preneck appendage prote 99.5 2.2E-11 7.6E-16 124.7 29.0 222 111-371 135-400 (772)
35 1h80_A IOTA-carrageenase; hydr 99.4 2.2E-12 7.4E-17 127.9 16.6 159 156-352 106-279 (464)
36 2pyg_A Poly(beta-D-mannuronate 99.4 5.1E-11 1.7E-15 116.1 22.2 172 151-352 173-368 (377)
37 1ru4_A Pectate lyase, PEL9A; p 99.3 6E-11 2.1E-15 115.9 20.7 251 25-311 11-299 (400)
38 2x6w_A Tail spike protein; vir 99.3 1.5E-11 5.1E-16 123.4 16.5 226 88-367 151-408 (600)
39 1dbg_A Chondroitinase B; beta 99.3 1.7E-10 5.7E-15 115.5 20.2 222 46-299 30-286 (506)
40 3eqn_A Glucan 1,3-beta-glucosi 99.2 3.4E-10 1.2E-14 116.0 15.8 93 27-129 397-498 (758)
41 1pcl_A Pectate lyase E; lyase 98.9 1.5E-07 5.2E-12 90.0 20.2 97 199-299 132-249 (355)
42 3uw0_A Pectinesterase; right-h 98.8 1.1E-07 3.6E-12 91.3 17.4 150 45-242 42-218 (364)
43 1gq8_A Pectinesterase; hydrola 98.7 4.7E-07 1.6E-11 85.4 15.6 199 46-304 18-243 (319)
44 1xg2_A Pectinesterase 1; prote 98.7 3.5E-07 1.2E-11 86.3 14.4 199 46-304 14-239 (317)
45 3zsc_A Pectate trisaccharide-l 98.6 6.3E-06 2.2E-10 78.0 22.1 115 180-298 89-215 (340)
46 2qy1_A Pectate lyase II; GAG l 98.6 1.1E-06 3.8E-11 83.4 16.5 99 175-274 87-204 (330)
47 1pxz_A Major pollen allergen J 98.6 1.3E-06 4.4E-11 83.5 15.8 116 152-274 107-226 (346)
48 2x3h_A K5 lyase, K5A lyase; ba 98.5 7.4E-05 2.5E-09 68.0 25.0 230 28-297 62-309 (542)
49 3vmv_A Pectate lyase; polysacc 98.5 5E-06 1.7E-10 78.4 17.9 140 176-338 97-249 (326)
50 1idk_A Pectin lyase A; signal, 98.5 4.6E-06 1.6E-10 79.9 17.5 114 175-300 125-257 (359)
51 1pe9_A Pectate lyase A; parall 98.4 3.2E-06 1.1E-10 80.9 13.9 95 180-274 112-238 (361)
52 1pxz_A Major pollen allergen J 98.3 3.8E-06 1.3E-10 80.1 12.8 133 158-304 87-226 (346)
53 2nsp_A Pectinesterase A; micha 98.3 2.3E-05 8E-10 74.6 18.2 176 46-274 17-230 (342)
54 1air_A Pectate lyase C, PELC; 98.3 6.6E-06 2.3E-10 78.6 13.7 119 174-300 103-238 (353)
55 1qcx_A Pectin lyase B; beta-he 98.3 1.6E-05 5.4E-10 76.2 16.2 134 153-308 126-283 (359)
56 1vbl_A Pectate lyase 47; PL 47 98.3 2.7E-06 9.3E-11 82.9 10.4 101 174-274 148-282 (416)
57 1air_A Pectate lyase C, PELC; 98.3 1.3E-05 4.6E-10 76.5 14.9 119 152-280 104-244 (353)
58 2o04_A Pectate lyase, PL; hexa 98.1 9E-06 3.1E-10 78.8 9.9 100 174-274 143-276 (399)
59 2inu_A Insulin fructotransfera 98.0 0.00012 3.9E-09 70.3 15.1 123 159-298 136-274 (410)
60 1qcx_A Pectin lyase B; beta-he 98.0 4.4E-05 1.5E-09 73.1 12.1 116 174-301 124-258 (359)
61 3zsc_A Pectate trisaccharide-l 98.0 0.00011 3.9E-09 69.4 14.2 104 153-273 85-215 (340)
62 2o04_A Pectate lyase, PL; hexa 97.8 0.00035 1.2E-08 67.7 15.2 112 152-274 144-298 (399)
63 1pcl_A Pectate lyase E; lyase 97.7 0.00066 2.3E-08 64.8 15.5 111 152-274 97-249 (355)
64 1vbl_A Pectate lyase 47; PL 47 97.6 0.00065 2.2E-08 66.1 13.0 113 152-274 149-304 (416)
65 1idk_A Pectin lyase A; signal, 97.6 0.00019 6.5E-09 68.6 9.1 135 153-309 126-284 (359)
66 1ru4_A Pectate lyase, PEL9A; p 97.6 0.00031 1.1E-08 68.3 10.3 109 152-274 109-230 (400)
67 2qy1_A Pectate lyase II; GAG l 97.5 0.0005 1.7E-08 65.1 11.4 135 152-299 87-249 (330)
68 3vmv_A Pectate lyase; polysacc 97.5 0.00075 2.6E-08 63.5 11.9 135 152-299 96-249 (326)
69 3grh_A YBHC, acyl-COA thioeste 97.4 0.011 3.7E-07 57.2 18.9 138 154-304 196-362 (422)
70 1pe9_A Pectate lyase A; parall 97.1 0.0022 7.5E-08 61.3 10.0 114 152-273 104-259 (361)
71 3t9g_A Pectate lyase; PL3, par 96.5 0.22 7.5E-06 42.4 16.8 129 183-341 53-184 (196)
72 1gq8_A Pectinesterase; hydrola 96.5 0.041 1.4E-06 51.6 13.6 116 176-305 89-210 (319)
73 1xg2_A Pectinesterase 1; prote 96.4 0.041 1.4E-06 51.5 12.9 116 176-305 85-206 (317)
74 2vbk_A Tailspike-protein; vira 96.2 0.0078 2.7E-07 58.0 7.1 72 151-245 196-286 (514)
75 3t9g_A Pectate lyase; PL3, par 96.1 0.2 6.8E-06 42.6 14.4 132 158-305 51-182 (196)
76 1ee6_A Pectate lyase; parallel 95.9 0.48 1.6E-05 40.4 15.6 108 159-276 48-155 (197)
77 3b4n_A Endo-pectate lyase; pec 95.6 0.77 2.6E-05 42.5 16.9 91 120-221 124-214 (344)
78 1dbg_A Chondroitinase B; beta 95.5 0.095 3.3E-06 52.2 11.5 142 157-305 226-392 (506)
79 2nsp_A Pectinesterase A; micha 95.2 0.16 5.6E-06 48.0 11.7 112 180-304 94-230 (342)
80 3uw0_A Pectinesterase; right-h 94.8 0.4 1.4E-05 45.6 13.2 113 180-304 120-255 (364)
81 1ee6_A Pectate lyase; parallel 94.6 0.62 2.1E-05 39.8 12.5 109 182-310 48-159 (197)
82 3grh_A YBHC, acyl-COA thioeste 91.3 2 6.8E-05 41.4 12.0 115 179-304 198-331 (422)
83 3b4n_A Endo-pectate lyase; pec 86.9 8.4 0.00029 35.6 12.1 53 182-241 158-211 (344)
84 3ju4_A Endo-N-acetylneuraminid 79.0 0.81 2.8E-05 43.7 2.1 38 36-77 4-42 (670)
85 2vfm_A Bifunctional tail prote 74.3 22 0.00077 33.1 10.2 68 231-301 269-353 (559)
86 3riq_A Tailspike protein; righ 72.3 22 0.00075 33.8 9.7 36 232-270 308-343 (543)
87 2v5i_A Salmonella typhimurium 69.5 21 0.00071 33.3 8.8 68 231-301 272-356 (559)
88 2xc1_A Bifunctional tail prote 64.4 48 0.0016 32.2 10.4 68 231-301 376-460 (666)
89 2vfm_A Bifunctional tail prote 61.8 58 0.002 30.3 10.2 80 209-304 270-373 (559)
90 2v5i_A Salmonella typhimurium 60.4 58 0.002 30.4 9.9 80 209-304 273-376 (559)
91 2xc1_A Bifunctional tail prote 54.4 84 0.0029 30.6 10.2 80 209-304 377-480 (666)
92 3riq_A Tailspike protein; righ 46.9 47 0.0016 31.6 7.1 70 231-303 262-346 (543)
93 1z65_A PRPLP, prion-like prote 34.4 20 0.00069 20.3 1.6 22 1-22 1-22 (30)
94 2w7z_A EFSQNR, pentapeptide re 29.6 1.1E+02 0.0036 25.9 6.4 12 329-340 151-162 (214)
95 2x3h_A K5 lyase, K5A lyase; ba 28.7 3.4E+02 0.012 24.8 19.1 144 152-311 130-295 (542)
96 2w7z_A EFSQNR, pentapeptide re 27.5 1.2E+02 0.0041 25.5 6.4 14 290-303 151-164 (214)
97 2yuh_A Tubulin-specific chaper 26.2 54 0.0018 27.4 3.7 11 153-163 71-81 (179)
98 4dz1_A DALS D-alanine transpor 22.5 28 0.00097 30.1 1.3 8 1-8 1-8 (259)
No 1
>3jur_A EXO-poly-alpha-D-galacturonosidase; beta-helix, cell WALL biogenesis/degradation, glycosidase; 2.05A {Thermotoga maritima}
Probab=100.00 E-value=6.2e-64 Score=497.69 Aligned_cols=338 Identities=23% Similarity=0.384 Sum_probs=297.9
Q ss_pred cccccccEEEeeccCccCCCCcccHHHHHHHHHHHhhcCCCcEEEecCceEEEeceeecccCCCCcEEEEEeeEEEeeCC
Q 048431 23 HSSATSTIYNVLRCGAKGNGITDSTQAFAKAWAAACASNESATIYVPKGRYLLGSVAFRSECKSPSITFLINGTLVAPTD 102 (396)
Q Consensus 23 ~~~~~~~~~~v~d~Ga~~dg~~d~t~aiq~Ai~~a~~~~~g~~v~iP~G~Y~~~~l~l~~~~~~~n~~l~~~G~l~~~~~ 102 (396)
.+..++..++|++|||++||.+|||+|||+||+ +|++.++++|+||+|+|++++|.|++ +++|+++|+|+++.+
T Consensus 20 ~p~~~~~~~~v~~~GA~gdg~tddt~Aiq~Ai~-~c~~~ggg~v~vP~G~yl~~~l~l~s-----~v~l~l~gtL~~s~d 93 (448)
T 3jur_A 20 EPQIPDREVNLLDFGARGDGRTDCSESFKRAIE-ELSKQGGGRLIVPEGVFLTGPIHLKS-----NIELHVKGTIKFIPD 93 (448)
T ss_dssp CCCCCSCEEEGGGGTCCCEEEEECHHHHHHHHH-HHHHHTCEEEEECSSEEEESCEECCT-----TEEEEESSEEEECCC
T ss_pred CCCCCCcEEEEEecccCCCCCeecHHHHHHHHH-hhhhcCCeEEEECCCcEEEeeeEeCC-----CcEEEEEEEEEecCC
Confidence 334467899999999999999999999999996 56767899999999999999999986 999999999999999
Q ss_pred cccc-CCC------------cceEEEeceeeEEEEc-eEEeCCC--CCcccccccC------------------------
Q 048431 103 YRVL-GQA------------NNWLSFEGVSHVSIIG-GALDAKG--TSLWACKTAA------------------------ 142 (396)
Q Consensus 103 ~~~~-~~~------------~~~i~~~~~~nv~I~G-g~idg~g--~~~w~~~~~~------------------------ 142 (396)
.++| +.. .+||.+.+++||+|.| |+|||+| +.||+.....
T Consensus 94 ~~~y~p~~~~~~~G~~~~~~~~lI~~~~~~ni~ItG~GtIDG~G~~~~ww~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 173 (448)
T 3jur_A 94 PERYLPVVLTRFEGIELYNYSPLVYALDCENVAITGSGVLDGSADNEHWWPWKGKKDFGWKEGLPNQQEDVKKLKEMAER 173 (448)
T ss_dssp GGGGCSCEEEEETTEEEEESCCSEEEESCEEEEEESSCEEECCCBTTBBGGGGCCGGGTCCTTSCCSHHHHHHHHHHHHH
T ss_pred HHHhCcccccccccccccCccceEEEeCcEeeEEEEeEEEECCCCchhhhhhcccccccccccccccccchhhhhhhhcc
Confidence 9988 321 3589999999999999 9999999 8899743210
Q ss_pred ---------CCCCCCCceEEEEEeecCeEEEEEEEecCCcceEEEeeeecEEEEeEEEEcCCCCCCCCCeeeeceeeEEE
Q 048431 143 ---------GSNCPNGATTLSITKSNNIRINGLLSLNSQMYHIVINRCQDVLVEGAKIIAAGDSPNTDGIHVQQSRNVII 213 (396)
Q Consensus 143 ---------~~~~~~~p~~i~~~~~~nv~i~~~~i~~~~~~~i~~~~~~nv~i~n~~i~~~~~~~~~DGi~~~~s~nv~I 213 (396)
+.....||++|.|.+|+|++|++++++|+|.|++++..|+|++|+|++|.++ ++|+|||++.+|+||+|
T Consensus 174 ~~p~~~~~~~~~~~~RP~~i~~~~~~nv~i~giti~nsp~~~i~~~~~~nv~i~~v~I~~~--~~NtDGidi~~s~nV~I 251 (448)
T 3jur_A 174 GTPVEERVFGKGHYLRPSFVQFYRCRNVLVEGVKIINSPMWCIHPVLSENVIIRNIEISST--GPNNDGIDPESCKYMLI 251 (448)
T ss_dssp TCCGGGCBCSTTCCCCCCSEEEESCEEEEEESCEEESCSSCSEEEESCEEEEEESCEEEEC--STTCCSBCCBSCEEEEE
T ss_pred cCcchhhhccccccCCceEEEEEcccceEEEeeEEEeCCCceEeeeccCCEEEEeEEEeec--cCCCccccccCCcCEEE
Confidence 0123578999999999999999999999999999999999999999999986 58999999999999999
Q ss_pred EecEEecCCceEEeCCC-----------CccEEEEeeeE--eCCc-eEEEeeccccCCCCCEEEEEEEeeEEeCCccEEE
Q 048431 214 KSSSIKTGDDCISIGPG-----------TNNLWIERVTC--GPGH-GISIGSLAKDLDEEGVQNVTVFKTVFTGTTNGLR 279 (396)
Q Consensus 214 ~n~~i~~~dD~i~i~~~-----------~~ni~i~n~~~--~~~~-gi~igs~g~~~~~~~~~ni~i~n~~~~~~~~gi~ 279 (396)
+||+|+++||||+++++ ++||+|+||+| ..+| |++|||+ ..++++||+|+||+|.++.+|++
T Consensus 252 ~n~~i~~gDDcIaiksg~~~dg~~~~~ps~nI~I~n~~~~~~~gh~gisiGS~----~~~~v~nV~v~n~~~~~t~~Gir 327 (448)
T 3jur_A 252 EKCRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSE----MSGGVRNVVARNNVYMNVERALR 327 (448)
T ss_dssp ESCEEEESSEEEEEBCCCHHHHHHHCCCEEEEEEESCEEECSSCSEEEEECSS----CTTCEEEEEEESCEEESCSEEEE
T ss_pred EeeEEEeCCCcEEeccCccccccccCCCceeEEEEEeEEecCCCcceEEECCc----ccCcEEEEEEEEEEEecccceEE
Confidence 99999999999999997 79999999999 6677 7999998 35789999999999999999999
Q ss_pred EEeecCCCCceEEcEEEEeeEeecCCccE-EEEeecCCCCCCCCCCCcceEEEeEEEEeEEEeeCCCeeEEEeeCCCCce
Q 048431 280 IKSWARPSNGFVRGIRFIDALMQNVQHPI-IIDQNYCPHNLNCPGQISGVKISDVIYQDIRGTSATPIAIKFDCSTKYPC 358 (396)
Q Consensus 280 i~~~~~~~~g~v~nI~~~ni~~~~~~~~i-~i~~~~~~~~~~~~~~~~~~~i~nI~~~ni~~~~~~~~~~~i~~~~~~~~ 358 (396)
||++.+ ++|.++||+|+|++|+++.+++ .|++.|.... ....+.++||+|+||+++. ...++.+.|.+..||
T Consensus 328 IKt~~g-~gG~v~nI~f~ni~m~~v~~~~i~I~~~Y~~~~-----~~~~~~i~nI~~~NI~~t~-~~~~i~i~g~~~~p~ 400 (448)
T 3jur_A 328 LKTNSR-RGGYMENIFFIDNVAVNVSEEVIRINLRYDNEE-----GEYLPVVRSVFVKNLKATG-GKYAVRIEGLENDYV 400 (448)
T ss_dssp EECCTT-TCSEEEEEEEESCEEEEESSEEEEEESCGGGCC-----CSCCCEEEEEEEESCEEEE-CSEEEEEECBTTBCE
T ss_pred EEEEcC-CCceEeeEEEEEEEEECCccccEEEEeeccCCC-----CCCCceEEEEEEEeEEEEe-cceEEEEEeCCCCCE
Confidence 999977 7799999999999999999988 8999887531 1234689999999999998 446999999999999
Q ss_pred ecEEEEeEEEEecCCcccceeee
Q 048431 359 KGIRLHNVHLRHLKQEAKSSCNN 381 (396)
Q Consensus 359 ~ni~~~ni~v~~~~~~~~~~c~~ 381 (396)
+||+|+||++.... ....|.+
T Consensus 401 ~~I~~~nv~i~~~~--~~~~~~~ 421 (448)
T 3jur_A 401 KDILISDTIIEGAK--ISVLLEF 421 (448)
T ss_dssp EEEEEEEEEEESCS--EEEEEEE
T ss_pred eeEEEEEEEEEccc--cceeEec
Confidence 99999999998543 2345555
No 2
>1rmg_A Rgase A, rhamnogalacturonase A; hydrolase, inverting, parallel beta-helix, glycosidase; HET: NAG BMA MAN GLC; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3
Probab=100.00 E-value=1.1e-59 Score=465.60 Aligned_cols=333 Identities=22% Similarity=0.402 Sum_probs=289.4
Q ss_pred ccccEEEeeccCccCCCCcccHHHHHHHHHHHhhcCCCcEEEecCceEEEec-eeecccCCCCcEEEEEeeEEEeeCCcc
Q 048431 26 ATSTIYNVLRCGAKGNGITDSTQAFAKAWAAACASNESATIYVPKGRYLLGS-VAFRSECKSPSITFLINGTLVAPTDYR 104 (396)
Q Consensus 26 ~~~~~~~v~d~Ga~~dg~~d~t~aiq~Ai~~a~~~~~g~~v~iP~G~Y~~~~-l~l~~~~~~~n~~l~~~G~l~~~~~~~ 104 (396)
++...++|++|||++||.+|||+|||+||+ +|+ ++++|+||+|+|++++ |.|++. + +++|+++|+++...+..
T Consensus 16 ~~~~~~~V~~~GA~~dg~tddT~Aiq~Ai~-ac~--~g~~V~vP~G~Yli~~~l~l~g~--s-~v~l~l~G~~l~~~~~~ 89 (422)
T 1rmg_A 16 GATKTCNILSYGAVADNSTDVGPAITSAWA-ACK--SGGLVYIPSGNYALNTWVTLTGG--S-ATAIQLDGIIYRTGTAS 89 (422)
T ss_dssp HHHCEEEGGGGTCCCSSSSBCHHHHHHHHH-HHT--BTCEEEECSSEEEECSCEEEESC--E-EEEEEECSEEEECCCCS
T ss_pred cCCcEEEeeeccccCCCCcccHHHHHHHHH-HCC--CCCEEEECCCeEEeCCceeecCC--C-eEEEEEcCcEEcccCCC
Confidence 346689999999999999999999999997 565 5899999999999986 999852 3 89999999887764421
Q ss_pred ccCCCcceEE---EeceeeEEEEc-eEEeCCCCCcccccccCCCCCCCCceEEEEEeecCeEEEEEEEecCCcceEEEee
Q 048431 105 VLGQANNWLS---FEGVSHVSIIG-GALDAKGTSLWACKTAAGSNCPNGATTLSITKSNNIRINGLLSLNSQMYHIVINR 180 (396)
Q Consensus 105 ~~~~~~~~i~---~~~~~nv~I~G-g~idg~g~~~w~~~~~~~~~~~~~p~~i~~~~~~nv~i~~~~i~~~~~~~i~~~~ 180 (396)
+.|+. ..+++++.|.| |+|||+|+.||... ..||.+|++.+|+|++|++++++|++.|++++..
T Consensus 90 -----~~~~~~~~~~~~~~i~i~G~G~IdG~G~~~w~~~-------~~rp~~i~~~~~~nv~I~~iti~nsp~~~i~i~~ 157 (422)
T 1rmg_A 90 -----GNMIAVTDTTDFELFSSTSKGAVQGFGYVYHAEG-------TYGARILRLTDVTHFSVHDIILVDAPAFHFTMDT 157 (422)
T ss_dssp -----SEEEEEEEEEEEEEECSSSCCEEECCTHHHHTTT-------CCCCEEEEEEEEEEEEEEEEEEECCSSCSEEEEE
T ss_pred -----CceEEEEecCceeEEeeccCEEEECCcchhhcCC-------CCCceEEEEcccceEEEECeEEECCCceEEEEeC
Confidence 33444 44556666779 99999999999531 2389999999999999999999999999999999
Q ss_pred eecEEEEeEEEEcCCCCCCCCCeeeeceeeEEEEecEEecCCceEEeCCCCccEEEEeeeEeCCceEEEeeccccCCCCC
Q 048431 181 CQDVLVEGAKIIAAGDSPNTDGIHVQQSRNVIIKSSSIKTGDDCISIGPGTNNLWIERVTCGPGHGISIGSLAKDLDEEG 260 (396)
Q Consensus 181 ~~nv~i~n~~i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~i~~~~~ni~i~n~~~~~~~gi~igs~g~~~~~~~ 260 (396)
|+|++|+|++|.+ .+.+++|||++.+ +||+|+||+|+++||||+++++++||+|+||+|..+||++|||+|.+ +.
T Consensus 158 ~~nv~I~n~~I~~-~d~~ntDGidi~~-~nV~I~n~~i~~gDD~Iai~s~~~nI~I~n~~~~~~~GisIGS~g~~---~~ 232 (422)
T 1rmg_A 158 CSDGEVYNMAIRG-GNEGGLDGIDVWG-SNIWVHDVEVTNKDECVTVKSPANNILVESIYCNWSGGCAMGSLGAD---TD 232 (422)
T ss_dssp EEEEEEEEEEEEC-CSSTTCCSEEEEE-EEEEEEEEEEESSSEEEEEEEEEEEEEEEEEEEESSSEEEEEEECTT---EE
T ss_pred cCCEEEEeEEEEC-CCCCCCccEeecC-CeEEEEeeEEeCCCCeEEeCCCCcCEEEEeEEEcCCcceeecccCCC---Cc
Confidence 9999999999999 4557999999999 99999999999999999999999999999999999999999998643 47
Q ss_pred EEEEEEEeeEEeCCccEEEEEeecCCCCceEEcEEEEeeEeecCCccEEEEeecCCCCCCCCCCCcceEEEeEEEEeEEE
Q 048431 261 VQNVTVFKTVFTGTTNGLRIKSWARPSNGFVRGIRFIDALMQNVQHPIIIDQNYCPHNLNCPGQISGVKISDVIYQDIRG 340 (396)
Q Consensus 261 ~~ni~i~n~~~~~~~~gi~i~~~~~~~~g~v~nI~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~nI~~~ni~~ 340 (396)
++||+|+||+|.++.+|++||++. +.|.++||+|+||+|+++.+++.|.+.|.... ......+.|+||+|+||++
T Consensus 233 v~nV~v~n~~~~~~~~Gi~Ikt~~--g~G~v~nI~~~NI~~~~v~~~i~i~~~y~~~~---~~~~~~~~i~nI~~~nI~g 307 (422)
T 1rmg_A 233 VTDIVYRNVYTWSSNQMYMIKSNG--GSGTVSNVLLENFIGHGNAYSLDIDGYWSSMT---AVAGDGVQLNNITVKNWKG 307 (422)
T ss_dssp EEEEEEEEEEEESSSCSEEEEEBB--CCEEEEEEEEEEEEEEEESCSEEEETBCTTSC---CBSSSCCEEEEEEEEEEEE
T ss_pred EEEEEEEeEEEeccceEEEEEecC--CCcEEEEEEEEeEEEECccccEEEEeeccCCC---cccCCCceEEEEEEEeEEE
Confidence 999999999999999999999975 45899999999999999999999999886532 1234567999999999999
Q ss_pred eeCC---CeeEEEeeCCCCceecEEEEeEEEEecCC-cccceeeeceecc
Q 048431 341 TSAT---PIAIKFDCSTKYPCKGIRLHNVHLRHLKQ-EAKSSCNNVIGEA 386 (396)
Q Consensus 341 ~~~~---~~~~~i~~~~~~~~~ni~~~ni~v~~~~~-~~~~~c~~~~~~~ 386 (396)
+... ..++.+.|.+..+|+||+|+||++...++ ...+.|.|++|..
T Consensus 308 t~~~g~~~~~i~i~~~~~~~~~ni~l~nv~i~~~~g~~~~~~C~n~~g~g 357 (422)
T 1rmg_A 308 TEANGATRPPIRVVCSDTAPCTDLTLEDIAIWTESGSSELYLCRSAYGSG 357 (422)
T ss_dssp EESCTTTSCSEEEECBTTBCEEEEEEEEEEEEESSSSCEEEEEESEEEES
T ss_pred EecccccceeEEEEeCCCCcEeeEEEEeEEEEcCCCCccceEEECCCccc
Confidence 9753 34899999999999999999999998764 5679999998753
No 3
>1bhe_A PEHA, polygalacturonase; family 28 glycosyl hydrolase, hydrolyses polygalacturonic acid, glycosidase; 1.90A {Pectobacterium carotovorum subsp} SCOP: b.80.1.3
Probab=100.00 E-value=2.1e-58 Score=451.60 Aligned_cols=330 Identities=29% Similarity=0.433 Sum_probs=289.0
Q ss_pred cccEEEeeccCccCCCCcccHHHHHHHHHHHhhcCCCcEEEecC---ceEEEeceeecccCCCCcEEEEEee--EEEeeC
Q 048431 27 TSTIYNVLRCGAKGNGITDSTQAFAKAWAAACASNESATIYVPK---GRYLLGSVAFRSECKSPSITFLING--TLVAPT 101 (396)
Q Consensus 27 ~~~~~~v~d~Ga~~dg~~d~t~aiq~Ai~~a~~~~~g~~v~iP~---G~Y~~~~l~l~~~~~~~n~~l~~~G--~l~~~~ 101 (396)
-+.+++|++|| .+|||+|||+||+ +|++ |++|+||+ |+|++++|.|++ +++|++++ +|+++.
T Consensus 11 ~p~~~~v~~~G-----~~~dT~aiq~Ai~-ac~~--Gg~v~~~~~~~g~yl~g~i~l~s-----~vtL~l~~Ga~L~~s~ 77 (376)
T 1bhe_A 11 TPSSCTTLKAD-----SSTATSTIQKALN-NCDQ--GKAVRLSAGSTSVFLSGPLSLPS-----GVSLLIDKGVTLRAVN 77 (376)
T ss_dssp CCCEEEEEECC-----SSBCHHHHHHHHT-TCCT--TCEEEEECSSSSEEEESCEECCT-----TCEEEECTTCEEEECS
T ss_pred CCCeEEECCCC-----CCccHHHHHHHHH-Hhcc--CCcEEEECCCCceEEEeEEEECC-----CCEEEECCCeEEEeCC
Confidence 34569999987 4799999999996 5764 66777765 799999999986 89999996 999999
Q ss_pred CccccCCC--------------cceEEEeceeeEEEEc-eEEeCCC--------CCcccccccC--CCCCCCCceEEEEE
Q 048431 102 DYRVLGQA--------------NNWLSFEGVSHVSIIG-GALDAKG--------TSLWACKTAA--GSNCPNGATTLSIT 156 (396)
Q Consensus 102 ~~~~~~~~--------------~~~i~~~~~~nv~I~G-g~idg~g--------~~~w~~~~~~--~~~~~~~p~~i~~~ 156 (396)
+...|+.. .+||.+.+++||+|.| |+|||+| +.||+..... ......||.+|.|.
T Consensus 78 ~~~~y~~~~~~~g~~~~~g~~~~~~I~~~~~~ni~I~G~G~IdG~G~~~~~~~~~~ww~~~~~~~~~~~~~~rp~~i~~~ 157 (376)
T 1bhe_A 78 NAKSFENAPSSCGVVDKNGKGCDAFITAVSTTNSGIYGPGTIDGQGGVKLQDKKVSWWELAADAKVKKLKQNTPRLIQIN 157 (376)
T ss_dssp CSGGGBSSTTCSSCEESCSCCBCCSEEEESCBSCEEECSSEEECCTTSCCSSSSSCTTHHHHHHHHHTCEECCCCSEEEE
T ss_pred CHHHCcCCCccccccccCCCCcccEEEEECCEeEEEEeCEEEECCCCcccCCCccccccccccccccCccCCCCeEEEEE
Confidence 98888632 3689999999999999 9999999 5789742100 01123589999999
Q ss_pred eecCeEEEEEEEecCCcceEEEeeeecEEEEeEEEEcCCCCCCCCCeeeeceeeEEEEecEEecCCceEEeCC-----CC
Q 048431 157 KSNNIRINGLLSLNSQMYHIVINRCQDVLVEGAKIIAAGDSPNTDGIHVQQSRNVIIKSSSIKTGDDCISIGP-----GT 231 (396)
Q Consensus 157 ~~~nv~i~~~~i~~~~~~~i~~~~~~nv~i~n~~i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~i~~-----~~ 231 (396)
+|+|++|++++++|+|.|++++..|++++|+|++|.++.+++|+|||++.+|+||+|+||+|.++||||++++ ++
T Consensus 158 ~~~nv~I~~iti~nsp~~~i~~~~~~~v~i~~v~I~~~~~~~NtDGid~~~s~nV~I~n~~i~~gDDcIaiks~~~~~~s 237 (376)
T 1bhe_A 158 KSKNFTLYNVSLINSPNFHVVFSDGDGFTAWKTTIKTPSTARNTDGIDPMSSKNITIAYSNIATGDDNVAIKAYKGRAET 237 (376)
T ss_dssp SCEEEEEEEEEEECCSSCSEEEESCEEEEEEEEEEECCTTCSSCCSEEEESCEEEEEESCEEECSSCSEEEEECTTSCCE
T ss_pred cceEEEEEeEEEECCCcEEEEEeCCCcEEEEeEEEECCCCCCCCceEeecCCceEEEEeCEEecCCCeEEEcccCCCCCc
Confidence 9999999999999999999999999999999999999888899999999999999999999999999999995 69
Q ss_pred ccEEEEeeeEeCCceEEEeeccccCCCCCEEEEEEEeeEEeCCccEEEEEeecCCCCceEEcEEEEeeEeecCCccEEEE
Q 048431 232 NNLWIERVTCGPGHGISIGSLAKDLDEEGVQNVTVFKTVFTGTTNGLRIKSWARPSNGFVRGIRFIDALMQNVQHPIIID 311 (396)
Q Consensus 232 ~ni~i~n~~~~~~~gi~igs~g~~~~~~~~~ni~i~n~~~~~~~~gi~i~~~~~~~~g~v~nI~~~ni~~~~~~~~i~i~ 311 (396)
+||+|+||+|..+||++|||+. . +++||+|+||+|.++.+|++||+|.+ ++|.++||+|+|++|+++.+|+.|+
T Consensus 238 ~nI~I~n~~~~~ghGisiGSe~----~-~v~nV~v~n~~~~~t~~GirIKt~~g-~~G~v~ni~f~ni~~~~v~~~i~i~ 311 (376)
T 1bhe_A 238 RNISILHNDFGTGHGMSIGSET----M-GVYNVTVDDLKMNGTTNGLRIKSDKS-AAGVVNGVRYSNVVMKNVAKPIVID 311 (376)
T ss_dssp EEEEEEEEEECSSSCEEEEEEE----S-SEEEEEEEEEEEESCSEEEEEECCTT-TCCEEEEEEEEEEEEESCSEEEEEE
T ss_pred eEEEEEeeEEEccccEEeccCC----c-cEeeEEEEeeEEeCCCcEEEEEEecC-CCceEeeEEEEeEEEeCCCceEEEE
Confidence 9999999999999999999983 3 89999999999999999999999977 8899999999999999999999999
Q ss_pred eecCCCCCCCCCCCcceEEEeEEEEeEEEeeCCCeeEEEeeCCCCceecEEEEeEEEEecCCcccceeeeceec
Q 048431 312 QNYCPHNLNCPGQISGVKISDVIYQDIRGTSATPIAIKFDCSTKYPCKGIRLHNVHLRHLKQEAKSSCNNVIGE 385 (396)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~i~nI~~~ni~~~~~~~~~~~i~~~~~~~~~ni~~~ni~v~~~~~~~~~~c~~~~~~ 385 (396)
+.|+... ....+.++||+|+||+++... ++.+.|.++.+|++|+|+||++... ..+.|+||...
T Consensus 312 ~~y~~~~-----~~~~~~i~ni~~~ni~gt~~~--~~~l~g~~~~~~~~I~l~nv~l~~~---~~~~~~~~~~~ 375 (376)
T 1bhe_A 312 TVYEKKE-----GSNVPDWSDITFKDVTSETKG--VVVLNGENAKKPIEVTMKNVKLTSD---STWQIKNVNVK 375 (376)
T ss_dssp TTSSCCC-----CCCCCEEEEEEEEEEEECSCC--EEEEECTTCSSCEEEEEEEEECCTT---CEEEEESEEEE
T ss_pred eeccCCC-----CCcCcEEEEEEEEEEEEEecc--eEEEEeCCCCCeeeEEEEeEEEecC---CCceEEEEEec
Confidence 9887532 123458999999999999765 7899999999999999999999855 36999999653
No 4
>1czf_A Polygalacturonase II; beta helix, hydrolase; HET: NAG; 1.68A {Aspergillus niger} SCOP: b.80.1.3
Probab=100.00 E-value=8e-59 Score=450.33 Aligned_cols=322 Identities=23% Similarity=0.391 Sum_probs=277.8
Q ss_pred ccEEEeeccCccCCCCcccHHHHHHHHHHHhhcCCCcEEEecCceEEEece-eecccCCCCcEEEEEeeEEEeeCCcccc
Q 048431 28 STIYNVLRCGAKGNGITDSTQAFAKAWAAACASNESATIYVPKGRYLLGSV-AFRSECKSPSITFLINGTLVAPTDYRVL 106 (396)
Q Consensus 28 ~~~~~v~d~Ga~~dg~~d~t~aiq~Ai~~a~~~~~g~~v~iP~G~Y~~~~l-~l~~~~~~~n~~l~~~G~l~~~~~~~~~ 106 (396)
..+++|++ ++|||+|++ +|++.++++|+||+|+|+. + .|++ +++|+++|.+.+. +..|
T Consensus 27 ~~~Ctv~~-----------~~aiq~ai~-~c~~~~g~~v~vP~G~~l~--l~~l~~-----~~~l~~~g~~~~~--~~~w 85 (362)
T 1czf_A 27 RDSCTFTT-----------AAAAKAGKA-KCSTITLNNIEVPAGTTLD--LTGLTS-----GTKVIFEGTTTFQ--YEEW 85 (362)
T ss_dssp -CEEEESS-----------HHHHHHHGG-GCSEEEEESCEECTTCCEE--ECSCCT-----TCEEEEESEEEEC--CCCS
T ss_pred CCEEEECC-----------HHHHHHHHH-HhhccCCCEEEECCCEEEE--eeccCC-----CeEEEEeCcEEec--cccC
Confidence 35688766 789999995 5777778999999999973 3 4443 8999999988763 3556
Q ss_pred CCCcceEEEeceeeEEEEc---eEEeCCCCCcccccccCCCCCCCCceEEEEEeecCeEEEEEEEecCCcceEEEeeeec
Q 048431 107 GQANNWLSFEGVSHVSIIG---GALDAKGTSLWACKTAAGSNCPNGATTLSITKSNNIRINGLLSLNSQMYHIVINRCQD 183 (396)
Q Consensus 107 ~~~~~~i~~~~~~nv~I~G---g~idg~g~~~w~~~~~~~~~~~~~p~~i~~~~~~nv~i~~~~i~~~~~~~i~~~~~~n 183 (396)
. ++|+.+. .+||+|.| |+|||+|+.||+.... +...||+++++.+|+|++|++++++|+|.|++++. |+|
T Consensus 86 ~--g~~i~~~-~~nv~I~G~~~g~IdG~G~~~w~~~~~---~~~~rP~~i~~~~~~nv~i~~iti~nsp~~~i~i~-~~n 158 (362)
T 1czf_A 86 A--GPLISMS-GEHITVTGASGHLINCDGARWWDGKGT---SGKKKPKFFYAHGLDSSSITGLNIKNTPLMAFSVQ-AND 158 (362)
T ss_dssp C--CCSEEEE-EESCEEEECTTCEEECCGGGTCCSCTT---SSSCCCCCEEEEEEETEEEESCEEECCSSCCEEEE-CSS
T ss_pred C--CcEEEEe-CccEEEEcCCCcEEECCCchhhcccCC---CCCCCCeEEEEeecccEEEEEEEEecCCccEEEEe-eCC
Confidence 5 4688885 59999999 8999999999986532 35679999999999999999999999999999999 999
Q ss_pred EEEEeEEEEcCC-C---CCCCCCeeeeceeeEEEEecEEecCCceEEeCCCCccEEEEeeeEeCCceEEEeeccccCCCC
Q 048431 184 VLVEGAKIIAAG-D---SPNTDGIHVQQSRNVIIKSSSIKTGDDCISIGPGTNNLWIERVTCGPGHGISIGSLAKDLDEE 259 (396)
Q Consensus 184 v~i~n~~i~~~~-~---~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~i~~~~~ni~i~n~~~~~~~gi~igs~g~~~~~~ 259 (396)
++|+|++|.++. + ++|+|||++.+|+||+|+||+|+++||||++++ .+||+|+||+|..+||++|||+|.+ ..+
T Consensus 159 v~i~~~~I~~~~~d~~~~~NtDGidi~~s~nV~I~n~~i~~gDDcIaiks-g~nI~i~n~~~~~ghGisiGS~G~~-~~~ 236 (362)
T 1czf_A 159 ITFTDVTINNADGDTQGGHNTDAFDVGNSVGVNIIKPWVHNQDDCLAVNS-GENIWFTGGTCIGGHGLSIGSVGDR-SNN 236 (362)
T ss_dssp EEEESCEEECGGGGTTTCCSCCSEEECSCEEEEEESCEEECSSCSEEESS-EEEEEEESCEEESSCCEEEEEECSS-SCC
T ss_pred EEEEEEEEECCccccccCCCCCceeecCcceEEEEeeEEecCCCEEEEeC-CeEEEEEEEEEeCCceeEEeecccc-CCC
Confidence 999999999863 3 789999999999999999999999999999999 5999999999999999999999766 457
Q ss_pred CEEEEEEEeeEEeCCccEEEEEeecCCCCceEEcEEEEeeEeecCC-ccEEEEeecCCCCCCCCCCCcceEEEeEEEEeE
Q 048431 260 GVQNVTVFKTVFTGTTNGLRIKSWARPSNGFVRGIRFIDALMQNVQ-HPIIIDQNYCPHNLNCPGQISGVKISDVIYQDI 338 (396)
Q Consensus 260 ~~~ni~i~n~~~~~~~~gi~i~~~~~~~~g~v~nI~~~ni~~~~~~-~~i~i~~~~~~~~~~~~~~~~~~~i~nI~~~ni 338 (396)
.++||+|+||+|.++.+|++||+|.+ +.|.++||+|+||+|+++. +|+.|++.|..... +..+...++|+||+|+||
T Consensus 237 ~v~nV~v~n~~~~~t~~GirIKt~~g-~~G~v~nI~~~ni~~~~v~~~~i~I~~~Y~~~~~-~~~p~~~~~i~nI~~~ni 314 (362)
T 1czf_A 237 VVKNVTIEHSTVSNSENAVRIKTISG-ATGSVSEITYSNIVMSGISDYGVVIQQDYEDGKP-TGKPTNGVTIQDVKLESV 314 (362)
T ss_dssp EEEEEEEEEEEEEEEEEEEEEEEETT-CCEEEEEEEEEEEEEEEEEEEEEEEEEEEETTEE-CSCCCSSEEEEEEEEEEE
T ss_pred CEEEEEEEeeEEECCceEEEEEEeCC-CCceEeeEEEEeEEEECcccccEEEEEecCCCCC-CCCCCCCceEEEEEEEEE
Confidence 89999999999999999999999987 7899999999999999997 79999999875321 112234579999999999
Q ss_pred EEeeCC-CeeEEEeeCCCCceecEEEEeEEEEecCCcccceeeecee
Q 048431 339 RGTSAT-PIAIKFDCSTKYPCKGIRLHNVHLRHLKQEAKSSCNNVIG 384 (396)
Q Consensus 339 ~~~~~~-~~~~~i~~~~~~~~~ni~~~ni~v~~~~~~~~~~c~~~~~ 384 (396)
+++... ..++.+.|+ ..+|+||+|+||++.. +.....|.|++.
T Consensus 315 ~gt~~~~~~~i~i~c~-~~~c~ni~~~nv~i~~--~~~~~~C~n~~~ 358 (362)
T 1czf_A 315 TGSVDSGATEIYLLCG-SGSCSDWTWDDVKVTG--GKKSTACKNFPS 358 (362)
T ss_dssp EEEECTTSEEEEEECC-TTTEEEEEEEEEEEES--SBCCSCCBSCCT
T ss_pred EEEecCCceEEEEEeC-CCcCcCEEEEeEEEEc--CCCcccCcCCCC
Confidence 999876 568999998 7899999999999984 455778999974
No 5
>2iq7_A Endopolygalacturonase; parallel beta helix, hydrolase; HET: NAG MAN PG4; 1.94A {Colletotrichum lupini}
Probab=100.00 E-value=3.8e-56 Score=429.16 Aligned_cols=319 Identities=25% Similarity=0.419 Sum_probs=275.3
Q ss_pred ccHHHHHHHHHHHhhcCCCcEEEecCceEEEece-eecccCCCCcEEEEEeeEEEeeCCccccCCCcceEEEeceeeEEE
Q 048431 45 DSTQAFAKAWAAACASNESATIYVPKGRYLLGSV-AFRSECKSPSITFLINGTLVAPTDYRVLGQANNWLSFEGVSHVSI 123 (396)
Q Consensus 45 d~t~aiq~Ai~~a~~~~~g~~v~iP~G~Y~~~~l-~l~~~~~~~n~~l~~~G~l~~~~~~~~~~~~~~~i~~~~~~nv~I 123 (396)
.||+|||+|++ +|++.++++|+||+|+|+. | .|++ +++|+++|.+.+. +..|. ++|+.+.+ +||+|
T Consensus 6 ~dt~aiq~ai~-~c~~~~g~~v~vP~G~~~~--l~~l~~-----~~~l~~~g~~~~~--~~~w~--g~~i~~~~-~nv~I 72 (339)
T 2iq7_A 6 TDAAAAIKGKA-SCTSIILNGIVVPAGTTLD--MTGLKS-----GTTVTFQGKTTFG--YKEWE--GPLISFSG-TNINI 72 (339)
T ss_dssp SCHHHHHHHGG-GCSEEEEESCEECTTCCEE--ECSCCT-----TCEEEEESEEEEC--CCCSC--CCSEEEEE-ESCEE
T ss_pred CCHHHHHHHHH-HhhccCCCeEEECCCEEEE--eeccCC-----CeEEEEeCcEEcc--ccccc--CcEEEEEc-ccEEE
Confidence 47999999995 5777778999999999974 3 4443 8999999988763 35555 46888865 99999
Q ss_pred Ec---eEEeCCCCCcccccccCCCCCCCCceEEEEEeecCeEEEEEEEecCCcceEEEeeeecEEEEeEEEEcCCC----
Q 048431 124 IG---GALDAKGTSLWACKTAAGSNCPNGATTLSITKSNNIRINGLLSLNSQMYHIVINRCQDVLVEGAKIIAAGD---- 196 (396)
Q Consensus 124 ~G---g~idg~g~~~w~~~~~~~~~~~~~p~~i~~~~~~nv~i~~~~i~~~~~~~i~~~~~~nv~i~n~~i~~~~~---- 196 (396)
.| |+|||+|+.||+.... .....||++|+|.+|+|++|++++++++|.|++++..|++++|+|++|.++.+
T Consensus 73 ~G~~gG~IdG~G~~~w~~~~~--~~~~~rp~~i~~~~~~nv~i~giti~nsp~~~i~i~~~~nv~i~~~~I~~~~~d~~~ 150 (339)
T 2iq7_A 73 NGASGHSIDCQGSRWWDSKGS--NGGKTKPKFFYAHSLKSSNIKGLNVLNTPVQAFSINSATTLGVYDVIIDNSAGDSAG 150 (339)
T ss_dssp EECTTCEEECCGGGTCCSCGG--GSSSCCCCCEEEEEEEEEEEECCEEECCSSCCEEEESCEEEEEESCEEECGGGGGTT
T ss_pred EcCCCCEEECCcccccccccc--cCCCCCCeEEEEeeeCcEEEEEEEEEeCCcceEEEeccCCEEEEEEEEECCcccccc
Confidence 99 6999999999986432 12456899999999999999999999999999999999999999999998743
Q ss_pred CCCCCCeeeeceeeEEEEecEEecCCceEEeCCCCccEEEEeeeEeCCceEEEeeccccCCCCCEEEEEEEeeEEeCCcc
Q 048431 197 SPNTDGIHVQQSRNVIIKSSSIKTGDDCISIGPGTNNLWIERVTCGPGHGISIGSLAKDLDEEGVQNVTVFKTVFTGTTN 276 (396)
Q Consensus 197 ~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~i~~~~~ni~i~n~~~~~~~gi~igs~g~~~~~~~~~ni~i~n~~~~~~~~ 276 (396)
++|+|||++.+|+||+|+||+|.++||||++++ .+||+|+||+|..+||++|||+|.+ ..+.++||+|+||+|.++.+
T Consensus 151 ~~ntDGid~~~s~nV~I~n~~i~~gDDciaiks-g~nI~i~n~~~~~ghGisiGSlg~~-~~~~v~nV~v~n~~~~~~~~ 228 (339)
T 2iq7_A 151 GHNTDAFDVGSSTGVYISGANVKNQDDCLAINS-GTNITFTGGTCSGGHGLSIGSVGGR-SDNTVKTVTISNSKIVNSDN 228 (339)
T ss_dssp CCSCCSEEEESCEEEEEESCEEECSSCSEEESS-EEEEEEESCEEESSCCEEEEEESSS-SCCEEEEEEEEEEEEESCSE
T ss_pred CCCCCcEEEcCcceEEEEecEEecCCCEEEEcC-CccEEEEeEEEECCceEEECcCCcc-cCCCEEEEEEEeeEEECCCc
Confidence 689999999999999999999999999999999 5999999999999999999998766 35789999999999999999
Q ss_pred EEEEEeecCCCCceEEcEEEEeeEeecCCc-cEEEEeecCCCCCCCCCCCcceEEEeEEEEeEEEeeCC-CeeEEEeeCC
Q 048431 277 GLRIKSWARPSNGFVRGIRFIDALMQNVQH-PIIIDQNYCPHNLNCPGQISGVKISDVIYQDIRGTSAT-PIAIKFDCST 354 (396)
Q Consensus 277 gi~i~~~~~~~~g~v~nI~~~ni~~~~~~~-~i~i~~~~~~~~~~~~~~~~~~~i~nI~~~ni~~~~~~-~~~~~i~~~~ 354 (396)
|++||+|.+ +.|.++||+|+|++|+++.. |+.|++.|..... +..+...+.|+||+|+||+++... ..++.+.|+
T Consensus 229 girIkt~~g-~~G~v~nI~~~ni~~~~v~~~~i~i~~~y~~~~~-~~~p~~~~~i~ni~~~ni~gt~~~~~~~~~i~c~- 305 (339)
T 2iq7_A 229 GVRIKTVSG-ATGSVSGVTYSGITLSNIAKYGIVIEQDYENGSP-TGTPTNGVPITGLTLSKITGSVASSGTNVYILCA- 305 (339)
T ss_dssp EEEEEEETT-CCCEEEEEEEEEEEEEEESSEEEEEEEEEETTEE-CSCCCSSSCEEEEEEEEEEEEECTTSEEEEEECC-
T ss_pred EEEEEEeCC-CCeEEEEEEEEeEEccCcccccEEEEeecCCCCC-CCCCCCCceEEEEEEEeEEEEeCCCCEEEEEEeC-
Confidence 999999977 78999999999999999986 9999999876311 112234578999999999999876 568999995
Q ss_pred CCceecEEEEeEEEEecCCcccceeeeceec
Q 048431 355 KYPCKGIRLHNVHLRHLKQEAKSSCNNVIGE 385 (396)
Q Consensus 355 ~~~~~ni~~~ni~v~~~~~~~~~~c~~~~~~ 385 (396)
..+|+||+|+||++.. +.....|.|++..
T Consensus 306 ~~~c~ni~~~nv~i~~--~~~~~~C~n~~~~ 334 (339)
T 2iq7_A 306 SGACSNWKWSGVSVTG--GKKSTKCSNIPSG 334 (339)
T ss_dssp TTCEEEEEEEEEEEES--SBCCSCCBCCCTT
T ss_pred CCcEecEEEEeEEEEc--CCCcccccCCCCC
Confidence 7899999999999984 3457789999754
No 6
>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A*
Probab=100.00 E-value=1e-55 Score=455.60 Aligned_cols=332 Identities=23% Similarity=0.349 Sum_probs=272.0
Q ss_pred ccccEEEeeccCccCCCCcccHHHHHHHHHHHhhcCCCcEEEecCceEEEeceeecccCCCCcEEEEEe--eEEEeeCCc
Q 048431 26 ATSTIYNVLRCGAKGNGITDSTQAFAKAWAAACASNESATIYVPKGRYLLGSVAFRSECKSPSITFLIN--GTLVAPTDY 103 (396)
Q Consensus 26 ~~~~~~~v~d~Ga~~dg~~d~t~aiq~Ai~~a~~~~~g~~v~iP~G~Y~~~~l~l~~~~~~~n~~l~~~--G~l~~~~~~ 103 (396)
+.+..++|++|||++||.+|||+|||+||+ +|+. |++|+||+|+|++++|.|++ +++|+++ ++|+++.+.
T Consensus 152 ~~~~~~~v~~~Ga~~dg~~ddt~aiq~Ai~-~c~~--g~~v~vP~G~y~~g~i~lks-----~v~L~l~~gatL~~s~d~ 223 (608)
T 2uvf_A 152 AKPQIVNVRDFGAIDDGKTLNTKAIQQAID-SCKP--GCRVEIPAGTYKSGALWLKS-----DMTLNLQAGAILLGSENP 223 (608)
T ss_dssp CCCCEEEGGGGTCCSSSSCCCHHHHHHHHH-TCCT--TEEEEECSEEEEECCEECCS-----SEEEEECTTEEEEECSCG
T ss_pred cCCCEEecccccccCCCCccCHHHHHHHHH-hcCC--CCEEEECCCceEecceeccC-----ceEEEecCCcEEEecCCH
Confidence 346689999999999999999999999996 5653 89999999999999999986 8999994 699999988
Q ss_pred cccCCC------------cceEEEec--------eeeEEEEc-eEEeCCCCCcccccc---c-C----------------
Q 048431 104 RVLGQA------------NNWLSFEG--------VSHVSIIG-GALDAKGTSLWACKT---A-A---------------- 142 (396)
Q Consensus 104 ~~~~~~------------~~~i~~~~--------~~nv~I~G-g~idg~g~~~w~~~~---~-~---------------- 142 (396)
.+|+.. .++|.+.+ ++||+|.| |+|||+|..||.... . +
T Consensus 224 ~~y~~~~~~~~~~~~~~~~~lI~~~~~~~~~~g~~~ni~I~G~GtIDG~G~~~~~~~~~~~~~g~~~p~~~~~~~~~~~~ 303 (608)
T 2uvf_A 224 DDYPAGYRLYPYSTIERPASLINAIDPNNSKPGTFRNIRITGSGVIDGNGWLRAKTAEITDELGRSLPQYVASKNSKVHE 303 (608)
T ss_dssp GGSCEEECSSTTCCSCEECCSEEECCSSCCCTTSEEEEEEESSCEEECCCBCEEEEEEEECTTSCEEEEECCCCTTTHHH
T ss_pred HHCcCcceeeeccccccccceEEeeccccccccceeeEEEEeeEEEcCcccccccccccccccccccccccccccccccc
Confidence 887621 24678776 79999999 999999998874310 0 0
Q ss_pred ---------------CCC-----CCCCceEEEEEeecCeEEEEEEEecCCcceEEEeeeecEEEEeEEEEcCCCCCCCCC
Q 048431 143 ---------------GSN-----CPNGATTLSITKSNNIRINGLLSLNSQMYHIVINRCQDVLVEGAKIIAAGDSPNTDG 202 (396)
Q Consensus 143 ---------------~~~-----~~~~p~~i~~~~~~nv~i~~~~i~~~~~~~i~~~~~~nv~i~n~~i~~~~~~~~~DG 202 (396)
+.. ...||.+|.|.+|+|++|+++++++++.|++++..|+|++|+|+++.. .+++|+||
T Consensus 304 ~~~~~~~~~~~~~~~g~~~~~~~~~~rP~~i~~~~~~nv~I~giti~ns~~~~i~~~~~~nv~i~~v~i~~-~~~~NtDG 382 (608)
T 2uvf_A 304 DGILAKNQVEKAVSDGMDLKNAYGQRRSSLMTLRGVENVYLAGFTVRNPAFHGIMNLENHNVVANGLIHQT-YDANNGDG 382 (608)
T ss_dssp HBSHHHHHHHHHHHTTCCHHHHHHHSSCCSEEEESEEEEEEESCEEECCSSCSEEEESCEEEEEESCEEEC-TTCTTCCS
T ss_pred cccccccccccccccccccccccccCCCeEEEEEeeeeEEEeCcEEecCCCCEEEEecCCCEEEeeEEEcC-CCCCCCCe
Confidence 000 114899999999999999999999999999999999999999999875 45689999
Q ss_pred eeeeceeeEEEEecEEecCCceEEeCCC----------CccEEEEeeeEeCCce-EEEeeccccCCCCCEEEEEEEeeEE
Q 048431 203 IHVQQSRNVIIKSSSIKTGDDCISIGPG----------TNNLWIERVTCGPGHG-ISIGSLAKDLDEEGVQNVTVFKTVF 271 (396)
Q Consensus 203 i~~~~s~nv~I~n~~i~~~dD~i~i~~~----------~~ni~i~n~~~~~~~g-i~igs~g~~~~~~~~~ni~i~n~~~ 271 (396)
|++.+|+||+|+||+|.++||||+++++ ++||+|+||+|.++|| +.|||+ ..++++||+|+||+|
T Consensus 383 idi~~s~nV~I~n~~i~~gDD~Iaiksg~~~~g~~~~~s~nI~I~n~~~~~ghg~~~iGS~----~~~~v~nI~v~n~~~ 458 (608)
T 2uvf_A 383 IEFGNSQNVMVFNNFFDTGDDCINFAAGTGEKAQEQEPMKGAWLFNNYFRMGHGAIVTGSH----TGAWIEDILAENNVM 458 (608)
T ss_dssp EEEESCEEEEEESCEEECSSCSEEEECCCSGGGGGSCCEEEEEEESCEECSSSCSEEEESC----CTTCEEEEEEESCEE
T ss_pred EEecCCceEEEEeeEEecCCceEEecCCcCccccccccccCEEEEeEEEeCCCCeEEEccc----CCCCEEEEEEEeEEE
Confidence 9999999999999999999999999876 7999999999999998 568996 567899999999999
Q ss_pred eCCccEEEEEeecCCCCceEEcEEEEeeEeecC-CccEEEEeecCCCCCC-C-CCCCcceEEEeEEEEeEEEeeCCC--e
Q 048431 272 TGTTNGLRIKSWARPSNGFVRGIRFIDALMQNV-QHPIIIDQNYCPHNLN-C-PGQISGVKISDVIYQDIRGTSATP--I 346 (396)
Q Consensus 272 ~~~~~gi~i~~~~~~~~g~v~nI~~~ni~~~~~-~~~i~i~~~~~~~~~~-~-~~~~~~~~i~nI~~~ni~~~~~~~--~ 346 (396)
.++.+|++||++.+ ++|.++||+|+|++|+++ ++||.|++.|+..... . ......+.+++|+|+||+...... .
T Consensus 459 ~~t~~GirIKt~~g-~gG~v~nI~~~ni~m~~v~~~~i~I~~~y~~~~~~~~~~~~~~~~~~~~V~i~nI~~~n~~gt~~ 537 (608)
T 2uvf_A 459 YLTDIGLRAKSTST-IGGGARNVTFRNNAMRDLAKQVMVMTLDYADSNANIDYPPAKIPAQFYDFTLKNVTVDNSTGKNP 537 (608)
T ss_dssp ESCSEEEEEEEETT-TCCEEEEEEEEEEEEEEESSEEEEEEEECCCCSCCCSSCCCSSCCEEEEEEEEEEEEEEECSSSC
T ss_pred ECCCceEEEeeecC-CCceEECcEEEeeEEEccccccEEEEeccCCCCcccccCCcCCCCccccEEEEeEEEEeeeceEE
Confidence 99999999999977 779999999999999999 5999999999754320 0 000112345666666665543321 2
Q ss_pred eEEEe--eCCCCceecEEEEeEEEEec
Q 048431 347 AIKFD--CSTKYPCKGIRLHNVHLRHL 371 (396)
Q Consensus 347 ~~~i~--~~~~~~~~ni~~~ni~v~~~ 371 (396)
++.+. |.+..+|+||+|+||++...
T Consensus 538 ~i~i~g~~~~~~p~~ni~~~nv~i~~~ 564 (608)
T 2uvf_A 538 SIEIKGDTANKAWHRLVHVNNVQLNNV 564 (608)
T ss_dssp SEEEECBGGGTBCEEEEEEEEEEEESC
T ss_pred eEEEEEEcCCCCccccEEEEeEEEEcc
Confidence 44444 45556788888888887654
No 7
>1nhc_A Polygalacturonase I; beta-helix, hydrolase; HET: MAN NAG BMA; 1.70A {Aspergillus niger} SCOP: b.80.1.3
Probab=100.00 E-value=5e-56 Score=427.80 Aligned_cols=318 Identities=23% Similarity=0.402 Sum_probs=274.3
Q ss_pred cccHHHHHHHHHHHhhcCCCcEEEecCceEEEece-eecccCCCCcEEEEEeeEEEeeCCccccCCCcceEEEeceeeEE
Q 048431 44 TDSTQAFAKAWAAACASNESATIYVPKGRYLLGSV-AFRSECKSPSITFLINGTLVAPTDYRVLGQANNWLSFEGVSHVS 122 (396)
Q Consensus 44 ~d~t~aiq~Ai~~a~~~~~g~~v~iP~G~Y~~~~l-~l~~~~~~~n~~l~~~G~l~~~~~~~~~~~~~~~i~~~~~~nv~ 122 (396)
..||+|||+|++ +|++.++++|+||+|+|+. | .|++ +++|+++|.+.+. +..|. ++|+.+. .+||+
T Consensus 5 ~~~t~aiq~ai~-~c~~~gg~~v~vP~G~~~~--l~~l~~-----~~~l~~~g~~~~~--~~~w~--g~li~~~-~~nv~ 71 (336)
T 1nhc_A 5 FTSASEASESIS-SCSDVVLSSIEVPAGETLD--LSDAAD-----GSTITFEGTTSFG--YKEWK--GPLIRFG-GKDLT 71 (336)
T ss_dssp ESSHHHHHHHGG-GCSEEEEESCEECTTCCEE--CTTCCT-----TCEEEEESEEEEC--CCCSC--CCSEECC-EESCE
T ss_pred ECCHHHHHHHHH-HhhccCCCeEEECCCEEEE--eeccCC-----CeEEEEeceEEcc--ccccc--CcEEEEe-cCCEE
Confidence 357999999995 5787778999999999973 3 3443 8999999988763 34554 4588776 49999
Q ss_pred EEc---eEEeCCCCCcccccccCCCCCCCCceEEEEEeecCeEEEEEEEecCCcceEEEeeeecEEEEeEEEEcCCC---
Q 048431 123 IIG---GALDAKGTSLWACKTAAGSNCPNGATTLSITKSNNIRINGLLSLNSQMYHIVINRCQDVLVEGAKIIAAGD--- 196 (396)
Q Consensus 123 I~G---g~idg~g~~~w~~~~~~~~~~~~~p~~i~~~~~~nv~i~~~~i~~~~~~~i~~~~~~nv~i~n~~i~~~~~--- 196 (396)
|.| |+|||+|+.||+.... .....||++++|.+|+|++|++++++++|.|++++. |++++|+|++|.++.+
T Consensus 72 I~G~~gG~IdG~G~~~w~~~~~--~~~~~rp~~i~~~~~~nv~i~~i~i~nsp~~~i~i~-~~nv~i~~~~I~~~~~d~~ 148 (336)
T 1nhc_A 72 VTMADGAVIDGDGSRWWDSKGT--NGGKTKPKFMYIHDVEDSTFKGINIKNTPVQAISVQ-ATNVHLNDFTIDNSDGDDN 148 (336)
T ss_dssp EEECTTCEEECCGGGTCCSCTT--TSSSCCCCCEEEEEEEEEEEESCEEECCSSCCEEEE-EEEEEEESCEEECTTHHHH
T ss_pred EEcCCCeEEECCccccccccCc--CCCCCCceEEEEeeeCcEEEEEEEEEeCCccEEEEE-eCCEEEEEEEEECCCcccc
Confidence 999 5999999999986432 224668999999999999999999999999999999 9999999999999753
Q ss_pred -CCCCCCeeeeceeeEEEEecEEecCCceEEeCCCCccEEEEeeeEeCCceEEEeeccccCCCCCEEEEEEEeeEEeCCc
Q 048431 197 -SPNTDGIHVQQSRNVIIKSSSIKTGDDCISIGPGTNNLWIERVTCGPGHGISIGSLAKDLDEEGVQNVTVFKTVFTGTT 275 (396)
Q Consensus 197 -~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~i~~~~~ni~i~n~~~~~~~gi~igs~g~~~~~~~~~ni~i~n~~~~~~~ 275 (396)
++|+|||++.+|+||+|+||+|.++||||++++ .+||+|+||+|.++||++|||+|.+ ..+.++||+|+||+|.++.
T Consensus 149 ~~~ntDGidi~~s~nV~I~n~~i~~gDDciaiks-g~nI~i~n~~~~~ghGisiGS~g~~-~~~~v~nV~v~n~~~~~t~ 226 (336)
T 1nhc_A 149 GGHNTDGFDISESTGVYISGATVKNQDDCIAINS-GESISFTGGTCSGGHGLSIGSVGGR-DDNTVKNVTISDSTVSNSA 226 (336)
T ss_dssp TCCSCCSEEECSCEEEEEESCEEESSSEEEEESS-EEEEEEESCEEESSSEEEEEEESSS-SCCEEEEEEEEEEEEESCS
T ss_pred cCCCCCcEEecCCCeEEEEeCEEEcCCCEEEEeC-CeEEEEEeEEEECCcCceEccCccc-cCCCEEEEEEEeeEEECCC
Confidence 789999999999999999999999999999999 5999999999999999999998766 3578999999999999999
Q ss_pred cEEEEEeecCCCCceEEcEEEEeeEeecCCc-cEEEEeecCCCCCCCCCCCcceEEEeEEEEeEEEeeCC-CeeEEEeeC
Q 048431 276 NGLRIKSWARPSNGFVRGIRFIDALMQNVQH-PIIIDQNYCPHNLNCPGQISGVKISDVIYQDIRGTSAT-PIAIKFDCS 353 (396)
Q Consensus 276 ~gi~i~~~~~~~~g~v~nI~~~ni~~~~~~~-~i~i~~~~~~~~~~~~~~~~~~~i~nI~~~ni~~~~~~-~~~~~i~~~ 353 (396)
+|++||+|.+ ++|.++||+|+|++|+++.. |+.|++.|.... .+..+...++++||+|+||+++... ..++.+.|+
T Consensus 227 ~girIkt~~g-~~G~v~nI~~~ni~~~~v~~~~i~i~~~y~~~~-~~~~p~~~~~i~~i~~~ni~gt~~~~~~~v~i~c~ 304 (336)
T 1nhc_A 227 NGVRIKTIYK-ETGDVSEITYSNIQLSGITDYGIVIEQDYENGS-PTGTPSTGIPITDVTVDGVTGTLEDDATQVYILCG 304 (336)
T ss_dssp EEEEEEEETT-CCCEEEEEEEEEEEEEEESSEEEEEEEEEETTE-ECSCCCSSSCEEEEEEEEEEEEECTTCEEEEEECC
T ss_pred cEEEEEEECC-CCCEEeeeEEeeEEeeccccccEEEEeecCCCC-CCCCCCCCceEEEEEEEeEEEEeCCCCEEEEEEcC
Confidence 9999999977 78999999999999999986 999999987631 1112224578999999999999876 568999995
Q ss_pred CCCceecEEEEeEEEEecCCcccceeeecee
Q 048431 354 TKYPCKGIRLHNVHLRHLKQEAKSSCNNVIG 384 (396)
Q Consensus 354 ~~~~~~ni~~~ni~v~~~~~~~~~~c~~~~~ 384 (396)
..+|+||+|+||++.. +.....|.|++.
T Consensus 305 -~~~c~ni~~~nv~i~~--~~~~~~C~n~~~ 332 (336)
T 1nhc_A 305 -DGSCSDWTWSGVDLSG--GKTSDKCENVPS 332 (336)
T ss_dssp -TTCEEEEEEEEEEEES--SBCCSCCBSCCT
T ss_pred -CCcEecEEEEeEEEEc--CCCCcccCCCCC
Confidence 8899999999999984 345788999975
No 8
>1ia5_A Polygalacturonase; glycosylhydrolase, hydrolase; HET: MAN NAG; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3 PDB: 1ib4_A*
Probab=100.00 E-value=1.7e-55 Score=424.31 Aligned_cols=315 Identities=22% Similarity=0.423 Sum_probs=272.7
Q ss_pred cHHHHHHHHHHHhhcCCCcEEEecCceEEEece-eecccCCCCcEEEEEeeEEEeeCCccccCCCcceEEEeceeeEEEE
Q 048431 46 STQAFAKAWAAACASNESATIYVPKGRYLLGSV-AFRSECKSPSITFLINGTLVAPTDYRVLGQANNWLSFEGVSHVSII 124 (396)
Q Consensus 46 ~t~aiq~Ai~~a~~~~~g~~v~iP~G~Y~~~~l-~l~~~~~~~n~~l~~~G~l~~~~~~~~~~~~~~~i~~~~~~nv~I~ 124 (396)
-++|||+|++ +|+..++++|+||+|+|+. | .|++ +++|+++|.+.+. +..|. ++|+.+.+ +||+|.
T Consensus 11 g~~aiq~ai~-~c~~~gg~~v~vP~G~~l~--l~~l~~-----~~~l~~~g~~~~~--~~~w~--g~li~~~~-~nv~I~ 77 (339)
T 1ia5_A 11 GASSASKSKT-SCSTIVLSNVAVPSGTTLD--LTKLND-----GTHVIFSGETTFG--YKEWS--GPLISVSG-SDLTIT 77 (339)
T ss_dssp HHHHHHHHGG-GCSEEEEESCEECTTCCEE--ECSCCT-----TCEEEEESEEEEC--CCCSC--CCSEEEEE-ESCEEE
T ss_pred chHHHHHHHH-HhhccCCCeEEECCCEEEE--eeccCC-----CeEEEEeCcEEcc--ccccc--CcEEEEEc-CcEEEE
Confidence 3679999995 5787778999999999974 3 4443 8999999988763 34554 46888865 999999
Q ss_pred c---eEEeCCCCCcccccccCCCCCCCCceEEEEEeecCeEEEEEEEecCCcceEEEeeeecEEEEeEEEEcCC-C---C
Q 048431 125 G---GALDAKGTSLWACKTAAGSNCPNGATTLSITKSNNIRINGLLSLNSQMYHIVINRCQDVLVEGAKIIAAG-D---S 197 (396)
Q Consensus 125 G---g~idg~g~~~w~~~~~~~~~~~~~p~~i~~~~~~nv~i~~~~i~~~~~~~i~~~~~~nv~i~n~~i~~~~-~---~ 197 (396)
| |+|||+|+.||+.... .....||++|+|.+|+|++|++++++++|.|++++..|++++|+|++|.++. + +
T Consensus 78 G~~gG~IdG~G~~~w~~~~~--~~~~~rp~~i~~~~~~nv~i~~i~i~nsp~~~i~i~~~~nv~i~~~~I~~~~~d~~~~ 155 (339)
T 1ia5_A 78 GASGHSINGDGSRWWDGEGG--NGGKTKPKFFAAHSLTNSVISGLKIVNSPVQVFSVAGSDYLTLKDITIDNSDGDDNGG 155 (339)
T ss_dssp ECTTCEEECCGGGTCSSCTT--TSSSCCCCCEEEEEEEEEEEESCEEECCSSCCEEEESCEEEEEESCEEECGGGTTTTC
T ss_pred cCCCeEEeCCCCcccccccc--CCCCCCCeEEEEeecCcEEEEEEEEEcCCcceEEEecccCeEEeeEEEECCccccccC
Confidence 9 5999999999986432 2246689999999999999999999999999999999999999999999864 2 6
Q ss_pred CCCCCeeeeceeeEEEEecEEecCCceEEeCCCCccEEEEeeeEeCCceEEEeeccccCCCCCEEEEEEEeeEEeCCccE
Q 048431 198 PNTDGIHVQQSRNVIIKSSSIKTGDDCISIGPGTNNLWIERVTCGPGHGISIGSLAKDLDEEGVQNVTVFKTVFTGTTNG 277 (396)
Q Consensus 198 ~~~DGi~~~~s~nv~I~n~~i~~~dD~i~i~~~~~ni~i~n~~~~~~~gi~igs~g~~~~~~~~~ni~i~n~~~~~~~~g 277 (396)
+|+|||++.+|+||+|+||+|.++||||++++ .+||+|+||+|.++||++|||+|.+ ..+.++||+|+||+|.++.+|
T Consensus 156 ~ntDGid~~~s~nV~I~n~~i~~gDDcIaiks-g~nI~i~n~~~~~ghGisiGS~g~~-~~~~v~nV~v~n~~~~~t~~g 233 (339)
T 1ia5_A 156 HNTDAFDIGTSTYVTISGATVYNQDDCVAVNS-GENIYFSGGYCSGGHGLSIGSVGGR-SDNTVKNVTFVDSTIINSDNG 233 (339)
T ss_dssp CSCCSEEEESCEEEEEESCEEECSSCSEEESS-EEEEEEESCEEESSSCEEEEEECSS-SCCEEEEEEEEEEEEESCSEE
T ss_pred CCCCcEEecCCceEEEEeeEEEcCCCeEEEeC-CeEEEEEeEEEECCceEEECcCCcc-cCCCEEEEEEEeeEEECCCcE
Confidence 89999999999999999999999999999999 5999999999999999999998766 357899999999999999999
Q ss_pred EEEEeecCCCCceEEcEEEEeeEeecCCc-cEEEEeecCCCCCCCCCCCcceEEEeEEEEeEEEeeCC-CeeEEEeeCCC
Q 048431 278 LRIKSWARPSNGFVRGIRFIDALMQNVQH-PIIIDQNYCPHNLNCPGQISGVKISDVIYQDIRGTSAT-PIAIKFDCSTK 355 (396)
Q Consensus 278 i~i~~~~~~~~g~v~nI~~~ni~~~~~~~-~i~i~~~~~~~~~~~~~~~~~~~i~nI~~~ni~~~~~~-~~~~~i~~~~~ 355 (396)
++||+|.+ +.|.++||+|+||+|+++.. |+.|++.|.. .. ..+...+.|+||+|+||+++... ..++.+.|+ .
T Consensus 234 irIKt~~g-~~G~v~nI~~~ni~~~~v~~~~i~i~~~y~~-~~--~~p~~~~~i~ni~~~ni~gt~~~~~~~v~i~c~-~ 308 (339)
T 1ia5_A 234 VRIKTNID-TTGSVSDVTYKDITLTSIAKYGIVVQQNYGD-TS--STPTTGVPITDFVLDNVHGSVVSSGTNILISCG-S 308 (339)
T ss_dssp EEEEEETT-CCCEEEEEEEEEEEEEEESSEEEEEEEEETC-TT--SCCCSSSCEEEEEEEEEEEEECTTSEEEEEECC-T
T ss_pred EEEEEeCC-CCcEEEeeEEEEEEEECcccccEEEEccCCC-CC--CCCcCCceEEEEEEEeEEEEeCCCCEEEEEEeC-C
Confidence 99999977 78999999999999999986 9999999842 21 12234578999999999999876 568999995 7
Q ss_pred CceecEEEEeEEEEecCCcccceeeecee
Q 048431 356 YPCKGIRLHNVHLRHLKQEAKSSCNNVIG 384 (396)
Q Consensus 356 ~~~~ni~~~ni~v~~~~~~~~~~c~~~~~ 384 (396)
.+|+||+|+||++.. +.....|.|++.
T Consensus 309 ~~c~ni~~~nv~i~~--~~~~~~C~n~~~ 335 (339)
T 1ia5_A 309 GSCSDWTWTDVSVSG--GKTSSKCTNVPS 335 (339)
T ss_dssp TCEEEEEEEEEEEES--SBCCSCCBSCCT
T ss_pred CCEecEEEEeEEEEC--CCCCeeeECCCC
Confidence 899999999999984 455788999974
No 9
>1hg8_A Endopolygalacturonase; hydrolase, pectin degradation; HET: NAG; 1.73A {Fusarium moniliforme} SCOP: b.80.1.3
Probab=100.00 E-value=2.6e-55 Score=424.29 Aligned_cols=318 Identities=22% Similarity=0.387 Sum_probs=272.8
Q ss_pred cHHHHHHHHHHHhhcCCCcEEEecCceEEEece-eecccCCCCcEEEEEeeEEEeeCCccccCCCcceEEEeceeeEEEE
Q 048431 46 STQAFAKAWAAACASNESATIYVPKGRYLLGSV-AFRSECKSPSITFLINGTLVAPTDYRVLGQANNWLSFEGVSHVSII 124 (396)
Q Consensus 46 ~t~aiq~Ai~~a~~~~~g~~v~iP~G~Y~~~~l-~l~~~~~~~n~~l~~~G~l~~~~~~~~~~~~~~~i~~~~~~nv~I~ 124 (396)
||+|||+|++ +|++.++++|+||+|+|+. + .|+ + +++|+++|.+.+. +..|. .++|+.+.+ +||+|.
T Consensus 7 ~t~aiq~ai~-~c~~~gg~~v~vP~G~~l~--l~~l~----~-~~~l~~~g~~~~~--~~~w~-~g~~i~~~~-~ni~I~ 74 (349)
T 1hg8_A 7 EYSGLATAVS-SCKNIVLNGFQVPTGKQLD--LSSLQ----N-DSTVTFKGTTTFA--TTADN-DFNPIVISG-SNITIT 74 (349)
T ss_dssp SGGGHHHHHH-HCSEEEECCCEECTTCCEE--ETTCC----T-TCEEEECSEEEEC--CCCCT-TCCSEEEEE-ESCEEE
T ss_pred CHHHHHHHHH-hccccCCCEEEECCCEEEE--eeccC----C-CeEEEEcCceecc--ccccc-CCceEEEEC-ccEEEE
Confidence 6899999995 5777778999999999974 3 344 3 8999999987763 34552 256888864 999999
Q ss_pred c---eEEeCCCCCcccccccCCCCCC-CCceEEEE-E-eecCeEEEEEEEecCCcceEEEeeeecEEEEeEEEEcCC-C-
Q 048431 125 G---GALDAKGTSLWACKTAAGSNCP-NGATTLSI-T-KSNNIRINGLLSLNSQMYHIVINRCQDVLVEGAKIIAAG-D- 196 (396)
Q Consensus 125 G---g~idg~g~~~w~~~~~~~~~~~-~~p~~i~~-~-~~~nv~i~~~~i~~~~~~~i~~~~~~nv~i~n~~i~~~~-~- 196 (396)
| |+|||+|+.||+.... .... .||++|.| . .++|++|++++++|+|.|++++..|++++|+|++|.++. +
T Consensus 75 G~~~G~IdG~G~~ww~~~~~--~~~~~~rP~~i~~~~~~~~nv~I~giti~nsp~~~i~i~~~~nv~i~~~~I~~~~~~~ 152 (349)
T 1hg8_A 75 GASGHVIDGNGQAYWDGKGS--NSNSNQKPDHFIVVQKTTGNSKITNLNIQNWPVHCFDITGSSQLTISGLILDNRAGDK 152 (349)
T ss_dssp ECTTCEEECCGGGTCCSCTT--CTTSCCCCSEEEEEEEEESSEEEESCEEECCSSEEEEEESCEEEEEEEEEEECGGGSS
T ss_pred ecCCCEEcCCcchhhhcccc--cCCCCCCCeEEEEeecCcCcEEEEEEEEEcCCCceEEEeccCCEEEEEEEEECCCCcc
Confidence 9 8999999999986532 1122 68999999 7 788999999999999999999999999999999999852 2
Q ss_pred ----------CCCCCCeeeeceeeEEEEecEEecCCceEEeCCCCccEEEEeeeEeCCceEEEeeccccCCCCCEEEEEE
Q 048431 197 ----------SPNTDGIHVQQSRNVIIKSSSIKTGDDCISIGPGTNNLWIERVTCGPGHGISIGSLAKDLDEEGVQNVTV 266 (396)
Q Consensus 197 ----------~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~i~~~~~ni~i~n~~~~~~~gi~igs~g~~~~~~~~~ni~i 266 (396)
++|+|||++.+|+||+|+||+|.++||||++++ ++||+|+||+|.++||++|||+|.+ ..+.++||+|
T Consensus 153 ~~~~~~~~~~~~NtDGid~~~s~nV~I~n~~i~~gDDcIaiks-g~nI~i~n~~~~~ghGisiGS~G~~-~~~~v~nV~v 230 (349)
T 1hg8_A 153 PNAKSGSLPAAHNTDGFDISSSDHVTLDNNHVYNQDDCVAVTS-GTNIVVSNMYCSGGHGLSIGSVGGK-SDNVVDGVQF 230 (349)
T ss_dssp CCTTTTTSCSCCSCCSEEEESCEEEEEEEEEEECSSCSEEESS-EEEEEEEEEEEESSCCEEEEEESSS-SCCEEEEEEE
T ss_pred ccccccccccCCCCCeEEEccccEEEEEeeEEecCCCeEEeeC-CeEEEEEeEEEeCCcceEEcccccc-ccCCEEEEEE
Confidence 589999999999999999999999999999999 6999999999999999999999876 4678999999
Q ss_pred EeeEEeCCccEEEEEeecCCCCceEEcEEEEeeEeecCC-ccEEEEeecCCCCCCCCCCCcceEEEeEEEEeEEEeeCC-
Q 048431 267 FKTVFTGTTNGLRIKSWARPSNGFVRGIRFIDALMQNVQ-HPIIIDQNYCPHNLNCPGQISGVKISDVIYQDIRGTSAT- 344 (396)
Q Consensus 267 ~n~~~~~~~~gi~i~~~~~~~~g~v~nI~~~ni~~~~~~-~~i~i~~~~~~~~~~~~~~~~~~~i~nI~~~ni~~~~~~- 344 (396)
+||+|.++.+|++||++.+ ++|.++||+|+||+|+++. +|+.|++.|.... .+..+...+.|+||+|+||+++...
T Consensus 231 ~n~~~~~~~~GirIKt~~g-~~G~v~nI~~~ni~~~~v~~~~i~i~~~Y~~~~-~~~~p~~~~~i~~I~~~ni~gt~~~~ 308 (349)
T 1hg8_A 231 LSSQVVNSQNGCRIKSNSG-ATGTINNVTYQNIALTNISTYGVDVQQDYLNGG-PTGKPTNGVKISNIKFIKVTGTVASS 308 (349)
T ss_dssp EEEEEEEEEEEEEEEEETT-CCEEEEEEEEEEEEEEEEEEEEEEEEEEECSSS-BCSCCCSSEEEEEEEEEEEEEEECTT
T ss_pred EEEEEECCCcEEEEEecCC-CCccccceEEEEEEEEccccccEEEEeeccCCC-CCCcccCCceEEEEEEEeEEEEeCCC
Confidence 9999999999999999977 7899999999999999997 6999999997632 1222234579999999999999876
Q ss_pred CeeEEEeeCCCCceecEEEEeEEEEecCCcccceeeecee
Q 048431 345 PIAIKFDCSTKYPCKGIRLHNVHLRHLKQEAKSSCNNVIG 384 (396)
Q Consensus 345 ~~~~~i~~~~~~~~~ni~~~ni~v~~~~~~~~~~c~~~~~ 384 (396)
..++.+.|+ ..+|+||+|+||++.. +.....|.|++.
T Consensus 309 ~~~v~i~c~-~~~c~ni~~~nv~i~~--~~~~~~C~n~~~ 345 (349)
T 1hg8_A 309 AQDWFILCG-DGSCSGFTFSGNAITG--GGKTSSCNYPTN 345 (349)
T ss_dssp SEEEEEECC-SSCEEEEEEESCEEEC--CSSCCEECSSSS
T ss_pred CEEEEEEeC-CCcCcCEEEEeEEEEc--CCCCeeeeCCCC
Confidence 568999998 5999999999999984 345678999976
No 10
>1k5c_A Endopolygalacturonase; beta helical structure, glycoside hydrolase, silver-LEAF IND substance, hydrolase; HET: NAG; 0.96A {Chondrostereum purpureum} SCOP: b.80.1.3 PDB: 1kcc_A* 1kcd_A*
Probab=100.00 E-value=6.9e-55 Score=418.51 Aligned_cols=310 Identities=22% Similarity=0.339 Sum_probs=265.9
Q ss_pred HHHHHHHHHHHhhcCCCcEEEecCceEEEeceeecccCCCCcEEEEEeeEEEeeCCccccCCCcceEEEeceeeEEEEc-
Q 048431 47 TQAFAKAWAAACASNESATIYVPKGRYLLGSVAFRSECKSPSITFLINGTLVAPTDYRVLGQANNWLSFEGVSHVSIIG- 125 (396)
Q Consensus 47 t~aiq~Ai~~a~~~~~g~~v~iP~G~Y~~~~l~l~~~~~~~n~~l~~~G~l~~~~~~~~~~~~~~~i~~~~~~nv~I~G- 125 (396)
++|||+ + ++|++.++++|+||+|+|+ .|.|++ +++|+++|++.+. +..|. ++|+.+. .+||+|.|
T Consensus 8 ~~aiq~-i-~aC~~~gg~~v~vP~G~~l--~l~l~~-----~~~l~~~g~~~~~--~~~w~--~~~i~~~-~~ni~I~G~ 73 (335)
T 1k5c_A 8 VDDAKD-I-AGCSAVTLNGFTVPAGNTL--VLNPDK-----GATVTMAGDITFA--KTTLD--GPLFTID-GTGINFVGA 73 (335)
T ss_dssp TTGGGG-C-TTCSEEEECCEEECTTCCE--EECCCT-----TCEEEECSCEEEC--CCCSC--SCSEEEE-EEEEEEECT
T ss_pred HHHhHH-H-HhcccCCCCEEEECCCEEE--EEEeCC-----CeEEEEeccEecc--ccccc--CcEEEEE-ccCEEEEeC
Confidence 678999 7 5688888899999999997 345554 8999999988763 35565 4688887 59999999
Q ss_pred -eEEeCCCCCcccccccCCCCCCCCceEEEEEeecCeEEEEEEEecCCcceEEEeeeec-EEEEeEEEEcCCC-----CC
Q 048431 126 -GALDAKGTSLWACKTAAGSNCPNGATTLSITKSNNIRINGLLSLNSQMYHIVINRCQD-VLVEGAKIIAAGD-----SP 198 (396)
Q Consensus 126 -g~idg~g~~~w~~~~~~~~~~~~~p~~i~~~~~~nv~i~~~~i~~~~~~~i~~~~~~n-v~i~n~~i~~~~~-----~~ 198 (396)
|+|||+|+.||+.... .....||++++|..|+ ++|++++++|+|.|++++..|+| |+|+|++|.++.+ ++
T Consensus 74 ~G~idG~G~~ww~~~~~--~~~~~rP~~i~~~~~~-v~i~giti~nsp~~~i~i~~~~n~v~i~~v~I~~~~~d~~~~~~ 150 (335)
T 1k5c_A 74 DHIFDGNGALYWDGKGT--NNGTHKPHPFLKIKGS-GTYKKFEVLNSPAQAISVGPTDAHLTLDGITVDDFAGDTKNLGH 150 (335)
T ss_dssp TCEEECCGGGTCCSCTT--TSSSCCCCCSEEEEEE-EEEESCEEESCSSCCEEEEEEEEEEEEESCEEECGGGGGGGCCC
T ss_pred ccEEcCChhHhhhcccc--cCCCCCCeEEEEeceE-EEEEEEEEECCCcceEEEEccCCeEEEEEEEEECCCCcccccCC
Confidence 8999999999986533 2246799999999999 99999999999999999999999 9999999999743 78
Q ss_pred CCCCeeeeceeeEEEEecEEecCCceEEeCCCCccEEEEeeeEeCCceEEEeeccccCCCCCEEEEEEEeeEEeCCccEE
Q 048431 199 NTDGIHVQQSRNVIIKSSSIKTGDDCISIGPGTNNLWIERVTCGPGHGISIGSLAKDLDEEGVQNVTVFKTVFTGTTNGL 278 (396)
Q Consensus 199 ~~DGi~~~~s~nv~I~n~~i~~~dD~i~i~~~~~ni~i~n~~~~~~~gi~igs~g~~~~~~~~~ni~i~n~~~~~~~~gi 278 (396)
|+|||++ +|+||+|+||+|+++||||+++++ +||+|+||+|..+||++|||++. .+.++||+|+||+|.++.+|+
T Consensus 151 NtDGidi-~s~nV~I~n~~i~~gDDcIaiksg-~nI~i~n~~~~~ghGisIGS~g~---~~~v~nV~v~n~~~~~t~~gi 225 (335)
T 1k5c_A 151 NTDGFDV-SANNVTIQNCIVKNQDDCIAINDG-NNIRFENNQCSGGHGISIGSIAT---GKHVSNVVIKGNTVTRSMYGV 225 (335)
T ss_dssp SCCSEEE-ECSSEEEESCEEESSSCSEEEEEE-EEEEEESCEEESSCCEEEEEECT---TCEEEEEEEESCEEEEEEEEE
T ss_pred CCCeEcc-cCCeEEEEeeEEEcCCCEEEeeCC-eeEEEEEEEEECCccCeEeeccC---CCCEEEEEEEeeEEECCCceE
Confidence 9999999 999999999999999999999995 99999999999999999999953 468999999999999999999
Q ss_pred EEEeecCCCC-ceEEcEEEEeeEeecCC-ccEEEEeecCCCCCCCCCCCcceEEEeEEEEeEE--EeeCC-CeeEEEeeC
Q 048431 279 RIKSWARPSN-GFVRGIRFIDALMQNVQ-HPIIIDQNYCPHNLNCPGQISGVKISDVIYQDIR--GTSAT-PIAIKFDCS 353 (396)
Q Consensus 279 ~i~~~~~~~~-g~v~nI~~~ni~~~~~~-~~i~i~~~~~~~~~~~~~~~~~~~i~nI~~~ni~--~~~~~-~~~~~i~~~ 353 (396)
+||++.+ ++ |.++||+|+||+|+++. +|+.|++.|.. +. ..+.+.+.|+||+|+||+ ++... ..++.+.|+
T Consensus 226 rIKt~~g-~~~G~v~nI~f~ni~~~~v~~~~i~i~~~Y~~-~~--~~p~~~~~i~nI~~~nI~~~Gt~~~~~~~i~i~c~ 301 (335)
T 1k5c_A 226 RIKAQRT-ATSASVSGVTYDANTISGIAKYGVLISQSYPD-DV--GNPGTGAPFSDVNFTGGATTIKVNNAATRVTVECG 301 (335)
T ss_dssp EEEEETT-CCSCEEEEEEEESCEEEEEEEEEEEEEEEETS-SS--SSCCSSSCEEEEEECSSCEEEEECTTCEEEEEECS
T ss_pred EEEEeCC-CCcceEeeeEEEEEEEEccccccEEEEeeCCC-CC--CCCCCCceEEEEEEEEEEEeeEEcCCceEEEEECC
Confidence 9999987 66 99999999999999997 69999999842 21 122245789999999999 77665 568999998
Q ss_pred CCCceecEEEEeEEEEecCCcccceeeeceec
Q 048431 354 TKYPCKGIRLHNVHLRHLKQEAKSSCNNVIGE 385 (396)
Q Consensus 354 ~~~~~~ni~~~ni~v~~~~~~~~~~c~~~~~~ 385 (396)
+ +|+||+|+||++...+ ...+.|.++...
T Consensus 302 ~--~c~ni~~~nv~i~~~~-~~~~~~~~~~~~ 330 (335)
T 1k5c_A 302 N--CSGNWNWSQLTVTGGK-AGTIKSDKAKIT 330 (335)
T ss_dssp S--EESEEEEEEEEEESSB-CCCEECTTCEEE
T ss_pred C--cCCCEEEEeEEEEcCC-CCceEeEEeEee
Confidence 6 9999999999998754 334666666544
No 11
>2x6w_A Tail spike protein; viral protein, beta-helix, hydrolase; HET: RAM GLC GLA NAG NDG; 1.35A {Enterobacteria phage HK620} PDB: 2vji_A 2vjj_A* 2x85_A* 2x6x_A* 2x6y_A*
Probab=100.00 E-value=2.4e-47 Score=380.95 Aligned_cols=293 Identities=15% Similarity=0.142 Sum_probs=245.9
Q ss_pred cccEEEeeccCccCCCCcccHHHHHHHHHHHhhcCCCcEEEecCc-eEEE------------eceeecccCCCCcEEEEE
Q 048431 27 TSTIYNVLRCGAKGNGITDSTQAFAKAWAAACASNESATIYVPKG-RYLL------------GSVAFRSECKSPSITFLI 93 (396)
Q Consensus 27 ~~~~~~v~d~Ga~~dg~~d~t~aiq~Ai~~a~~~~~g~~v~iP~G-~Y~~------------~~l~l~~~~~~~n~~l~~ 93 (396)
.+.+++|++|||++| ||+|||+||+ +|++.++++|+||+| +|++ ++|.|++ +++|++
T Consensus 48 ~~~~~nV~dfGA~gD----dT~AIqkAId-aCs~~GGgtV~VPaG~tYLt~sv~~gp~~~~sGpI~LkS-----nVtL~L 117 (600)
T 2x6w_A 48 CDPSGNVIQPGPNVD----SRQYLQAAID-YVSSNGGGTITIPAGYTWYLGSYGVGGIAGHSGIIQLRS-----NVNLNI 117 (600)
T ss_dssp BCTTSCBCCCCTTCC----CHHHHHHHHH-HHHHTTCEEEEECTTCEEEECSCCCGGGGGGTEEEECCT-----TEEEEE
T ss_pred CCcEEeeecCCCCcc----CHHHHHHHHH-HhhhcCCCEEEECCCCEEEecccccccccccccceEEcC-----ceEEee
Confidence 356899999999998 9999999996 578789999999999 9999 8899986 999999
Q ss_pred eeEEEeeCCccccCCC-------cceEEEeceeeEEEEc-eEEeCCCCCcccccccCCCCCCCCceEEEEEeecCeEEEE
Q 048431 94 NGTLVAPTDYRVLGQA-------NNWLSFEGVSHVSIIG-GALDAKGTSLWACKTAAGSNCPNGATTLSITKSNNIRING 165 (396)
Q Consensus 94 ~G~l~~~~~~~~~~~~-------~~~i~~~~~~nv~I~G-g~idg~g~~~w~~~~~~~~~~~~~p~~i~~~~~~nv~i~~ 165 (396)
+|+|+++.+.++|+.. .+++.+.+++||+|.| |+|||+|+.||.... ....||+ +.+.+|+ |+|
T Consensus 118 dGtL~as~d~~~yp~~~~v~~~w~slI~~~~~~NItItG~GtIDGqG~~wW~~~~----~~~~RP~-l~f~~c~---I~G 189 (600)
T 2x6w_A 118 EGRIHLSPFFDLKPFQVFVGFDNGDPASSGNLENCHIYGHGVVDFGGYEFGASSQ----LRNGVAF-GRSYNCS---VTG 189 (600)
T ss_dssp CSEEEECGGGTTSCEEEEECCSSSSGGGCCCEEEEEEESSCEEECTTCCCSSTTC----CEEEEEC-CSEEEEE---EES
T ss_pred ecEEEEcCChHHCcccccccccccceEEEecceeEEEecceeeeCCccccccccc----cCCCCCE-EEEeeeE---EeC
Confidence 9999999998888641 2337788899999999 999999999996321 1113677 8888888 999
Q ss_pred EEEecC-CcceEEE---eeeecEEEEeEE----EEcCCCCCCCCCeeeeceeeEEEEecEEecCCceEEe-CCCCc-cEE
Q 048431 166 LLSLNS-QMYHIVI---NRCQDVLVEGAK----IIAAGDSPNTDGIHVQQSRNVIIKSSSIKTGDDCISI-GPGTN-NLW 235 (396)
Q Consensus 166 ~~i~~~-~~~~i~~---~~~~nv~i~n~~----i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~i-~~~~~-ni~ 235 (396)
++++|+ |.|++++ ..|+||+|+|++ |.+ ++|+||| |+|+||+|.++||||++ |+++. ++.
T Consensus 190 ITi~NSDP~w~I~iG~~~~c~NVtI~nvtfi~aI~s---spNTDGI-------V~I~nc~I~tGDDCIAI~KSGs~~ni~ 259 (600)
T 2x6w_A 190 ITFQNGDVTWAITLGWNGYGSNCYVRKCRFINLVNS---SVNADHS-------TVYVNCPYSGVESCYFSMSSSFARNIA 259 (600)
T ss_dssp CEEESCCCSCSEEECBTTBEEEEEEESCEEECCCCC---SSCCCEE-------EEEECSSSEEEESCEEECCCTTHHHHE
T ss_pred eEEECCCCccEEEeCCCCCcccEEEeCeEEcceEec---CCCCCEE-------EEEEeeEEecCCcEEEEecCCCcCCeE
Confidence 999999 9999999 999999999999 776 6899999 99999999999999999 99864 467
Q ss_pred EEeeeEeCCc-eEEEeeccccCCCCCEEEEEEEeeEEeCCccEEEEEeecCCCCceEEcEEEEeeEeecCCccEEEEeec
Q 048431 236 IERVTCGPGH-GISIGSLAKDLDEEGVQNVTVFKTVFTGTTNGLRIKSWARPSNGFVRGIRFIDALMQNVQHPIIIDQNY 314 (396)
Q Consensus 236 i~n~~~~~~~-gi~igs~g~~~~~~~~~ni~i~n~~~~~~~~gi~i~~~~~~~~g~v~nI~~~ni~~~~~~~~i~i~~~~ 314 (396)
++ .|..+| |++|||+ ..+.++||+|+| +||++.+ ++|.++||+|+||+|+++..++.+.+..
T Consensus 260 ~e--~~~~GHgGISIGSe----~~ggV~NV~V~N----------rIKt~~G-~GG~V~NItfeNI~m~nV~~~I~i~q~~ 322 (600)
T 2x6w_A 260 CS--VQLHQHDTFYRGST----VNGYCRGAYVVM----------HAAEAAG-AGSYAYNMQVENNIAVIYGQFVILGSDV 322 (600)
T ss_dssp EE--EEECSSSEEEESCE----EEEESEEEEEEE----------CGGGCTT-TCSEEEEEEEESCEEEESSEEEEEEECB
T ss_pred EE--EEcCCCCcEEeccc----ccCcEEEEEEEE----------EEEeecC-CCceEEEEEEEEEEEEccceEEEeCCCC
Confidence 77 677777 8999997 356799999999 5666655 7799999999999999999888887651
Q ss_pred CCCCCCCCCCCcceEEEeEEEEeEEEeeCCCe------eEEEeeCC-------CCceecEEEEeEEEEecC
Q 048431 315 CPHNLNCPGQISGVKISDVIYQDIRGTSATPI------AIKFDCST-------KYPCKGIRLHNVHLRHLK 372 (396)
Q Consensus 315 ~~~~~~~~~~~~~~~i~nI~~~ni~~~~~~~~------~~~i~~~~-------~~~~~ni~~~ni~v~~~~ 372 (396)
...+.+.|+||+|+||+++..... ...+.+.| +.++++|+|+|+++..++
T Consensus 323 --------~~~s~~~IsnItfkNItgTsas~aav~~~~g~~i~g~p~~~~~~~~~~Ie~V~~~~~~~~~~~ 385 (600)
T 2x6w_A 323 --------TATVSGHLNDVIVSGNIVSIGERAAFSAPFGAFIDIGPDNSGASNVQDIQRVLVTGNSFYAPA 385 (600)
T ss_dssp --------CSSCBCEEEEEEEESCEEEECSCCTTSSSCEEEEEECCCTTCCSSSCCEEEEEEESCEEECCT
T ss_pred --------CCCCCceEEEEEEEeEEEEeccccccccccceEEEecCcccccccccceeEEEEeceEEEcCC
Confidence 123556999999999999975421 25666655 368999999999997654
No 12
>1x0c_A Isopullulanase; glycoside hydrolase family 49, glycoprotein, hydro; HET: NAG; 1.70A {Aspergillus niger} PDB: 1wmr_A* 2z8g_A*
Probab=100.00 E-value=2.7e-41 Score=342.37 Aligned_cols=300 Identities=12% Similarity=0.085 Sum_probs=233.8
Q ss_pred ccCccCCCCcccHHHHHHHHHHHhhc-------------------------CCCcEEEecCceEEE---eceeecccCCC
Q 048431 35 RCGAKGNGITDSTQAFAKAWAAACAS-------------------------NESATIYVPKGRYLL---GSVAFRSECKS 86 (396)
Q Consensus 35 d~Ga~~dg~~d~t~aiq~Ai~~a~~~-------------------------~~g~~v~iP~G~Y~~---~~l~l~~~~~~ 86 (396)
.|||.+||.+|.+.+|. +++++|.. .++++|+||+|+|++ |++.|++
T Consensus 147 ~~~~~~dg~~~~~~~l~-ifa~p~~~~~~~P~~~~~~~~~~~~g~~~~~~~~ggg~v~vP~G~yl~g~~G~i~l~s---- 221 (549)
T 1x0c_A 147 LISLAPSGARQPENALL-IFASPFENSSTKPQPGSPNSIAPAPGRVLGLNTTSASTVVFNPGVYYFTGHDHMVLSS---- 221 (549)
T ss_dssp EEEETTTTEEEESEEEE-EEEECCCCTTTSCCTTCSSEECCCSEECCCTTTCCCSEEEECSEEEECCTTCCEEECT----
T ss_pred cccccccCcCCCcceEE-EEcCChhhccCCCCcCCCCceeeccccccccccCCCCEEEECCeEEecCCceEEEecC----
Confidence 68899999988888776 55443332 468999999999997 5899987
Q ss_pred CcEE-EEEe-e-EEEeeCCccccCCCcceEEEeceeeEEEEc-eEEeCCCCCcccccccC-CCCCCCCceEEEE------
Q 048431 87 PSIT-FLIN-G-TLVAPTDYRVLGQANNWLSFEGVSHVSIIG-GALDAKGTSLWACKTAA-GSNCPNGATTLSI------ 155 (396)
Q Consensus 87 ~n~~-l~~~-G-~l~~~~~~~~~~~~~~~i~~~~~~nv~I~G-g~idg~g~~~w~~~~~~-~~~~~~~p~~i~~------ 155 (396)
+++ |+++ | +|++ ++....+++||+|.| |+|||+|..||...... ......+|++|.|
T Consensus 222 -~~~~L~l~~GA~L~g-----------s~~~~~~~~nv~ItG~GtIDG~G~~ww~~~~~~~~~~~~~rp~~i~~~~~~~~ 289 (549)
T 1x0c_A 222 -SVTWVYFAPGAYVKG-----------AVEFLSTASEVKASGHGVLSGEQYVWYADPDEGYQKASGANNNGLRMWRGTLG 289 (549)
T ss_dssp -TCCEEEECTTEEEES-----------CEEECCCSSEEEEESSCEEECTTSCTTEEGGGTTEECGGGCSCCCCSEEEECC
T ss_pred -CCCeEecCCCCEEEE-----------EEEEecCceeEEEEeeEEEECCCceecccCcccccccccCCCceEEEeecccc
Confidence 899 9997 5 4443 122222799999999 99999999999532110 0012236777777
Q ss_pred EeecCeEEEEEEEecCCcceEEEe-ee-ec--EEEEeEEEEcCCCCCCCCCeeeeceeeEEEEecEEecCCceEEeCCCC
Q 048431 156 TKSNNIRINGLLSLNSQMYHIVIN-RC-QD--VLVEGAKIIAAGDSPNTDGIHVQQSRNVIIKSSSIKTGDDCISIGPGT 231 (396)
Q Consensus 156 ~~~~nv~i~~~~i~~~~~~~i~~~-~~-~n--v~i~n~~i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~i~~~~ 231 (396)
.+|+|++|+|++++|+|.|++++. .| ++ ++|+|+++.++. .+++|||++. +||+|+||+|+++||||++++
T Consensus 290 ~~c~nV~I~Giti~Nsp~w~i~i~~~~~~ni~V~I~n~~i~~~~-~~NTDGidi~--~nV~I~n~~i~~gDDcIaIks-- 364 (549)
T 1x0c_A 290 NSSQTFVLNGVTVSAPPFNSMDWSGNSLDLITCRVDDYKQVGAF-YGQTDGLEMY--PGTILQDVFYHTDDDGLKMYY-- 364 (549)
T ss_dssp SSCEEEEEESCEEECCSSCSEEEECSCGGGEEEEEEEEEEECCC-BTTCCCCBCC--TTCEEEEEEEEESSCCEECCS--
T ss_pred CCceEEEEECcEEECCCceeEEeeccCCCCCeEEEEeeEeEcCC-CCCCCccccc--CCEEEEeeEEeCCCCEEEECC--
Confidence 999999999999999999999966 56 69 999999998754 3689999998 999999999999999999998
Q ss_pred ccEEEEeeeEeC--Cce-EEEeeccccCCCCCEEEEEEEeeEEeCCcc------EEEEEee--c--C------CCCceEE
Q 048431 232 NNLWIERVTCGP--GHG-ISIGSLAKDLDEEGVQNVTVFKTVFTGTTN------GLRIKSW--A--R------PSNGFVR 292 (396)
Q Consensus 232 ~ni~i~n~~~~~--~~g-i~igs~g~~~~~~~~~ni~i~n~~~~~~~~------gi~i~~~--~--~------~~~g~v~ 292 (396)
+||+|+||+|.. +++ |++||. .+.++||+|+||+|.++.. +..|++. . + ...|.++
T Consensus 365 ~NI~I~n~~~~~~~g~~~IsiGs~-----~~~V~NV~v~n~~i~~s~~~k~~~~g~iI~~~~~~~~g~~~~~~d~~G~i~ 439 (549)
T 1x0c_A 365 SNVTARNIVMWKESVAPVVEFGWT-----PRNTENVLFDNVDVIHQAYANAGNNPGIFGAVNNYLYAPDGLSSNHSTGNS 439 (549)
T ss_dssp SSEEEEEEEEEECSSSCSEECCBS-----CCCEEEEEEEEEEEEECCCCSGGGCCCSEEECCBTTTCTTSCCSCCCCBEE
T ss_pred CCEEEEeeEEEcCCCCceEEECCC-----CCcEEEEEEEeeEEECccccccccceEEEecccccccCccccCcCCCceEc
Confidence 999999999975 457 999984 4789999999999998763 4447761 1 1 1367899
Q ss_pred cEEEEeeEeecCC-ccEEEEeecCCCCCCCCCCCcceEEEeEEEEeEEEeeCC-----CeeEEEeeCCC------Cceec
Q 048431 293 GIRFIDALMQNVQ-HPIIIDQNYCPHNLNCPGQISGVKISDVIYQDIRGTSAT-----PIAIKFDCSTK------YPCKG 360 (396)
Q Consensus 293 nI~~~ni~~~~~~-~~i~i~~~~~~~~~~~~~~~~~~~i~nI~~~ni~~~~~~-----~~~~~i~~~~~------~~~~n 360 (396)
||+|+||+|+++. +++.+...+. .++..++||+|+||+++... ..+..+.+.+. .+|+|
T Consensus 440 nI~f~NI~i~nv~~~g~~~~~~~g---------~pg~~I~nI~i~NI~i~~~~~~~~~~~~~~i~G~~~~~~~~~~~v~n 510 (549)
T 1x0c_A 440 NMTVRNITWSNFRAEGSSSALFRI---------NPIQNLDNISIKNVSIESFEPLSINTTESWMPVWYDLNNGKQITVTD 510 (549)
T ss_dssp EEEEEEEEEEEEEEEEEECCSEEE---------CCSEEEEEEEEEEEEEEEECCGGGTCSCEEECCCBBTTTCCBCCEEE
T ss_pred cEEEEeEEEEeEEEeceEEeeecC---------CCCCcCccEEEEEEEEEccccccccccceEEeCCCccccccceeeee
Confidence 9999999999987 5655443321 13447999999999987654 33455665433 68999
Q ss_pred EEEEeEEEEe
Q 048431 361 IRLHNVHLRH 370 (396)
Q Consensus 361 i~~~ni~v~~ 370 (396)
|+|+||++..
T Consensus 511 I~f~NV~i~G 520 (549)
T 1x0c_A 511 FSIEGFTVGN 520 (549)
T ss_dssp EEEEEEEETT
T ss_pred EEEEeEEEeC
Confidence 9999999863
No 13
>1ogo_X Dextranase; hydrolase, dextran degradation, glycosidase; HET: BGC GLC; 1.65A {Penicillium minioluteum} SCOP: b.133.1.1 b.80.1.10 PDB: 1ogm_X*
Probab=100.00 E-value=4.3e-39 Score=325.93 Aligned_cols=267 Identities=12% Similarity=0.115 Sum_probs=214.9
Q ss_pred CCCcEEEecCceEEE-------------eceeecccCCCCcEE-EEEe-e-EEEeeCCccccCCCcceEEEeceeeEEEE
Q 048431 61 NESATIYVPKGRYLL-------------GSVAFRSECKSPSIT-FLIN-G-TLVAPTDYRVLGQANNWLSFEGVSHVSII 124 (396)
Q Consensus 61 ~~g~~v~iP~G~Y~~-------------~~l~l~~~~~~~n~~-l~~~-G-~l~~~~~~~~~~~~~~~i~~~~~~nv~I~ 124 (396)
.++++||||+|+|++ |+|.|++ +++ |+++ | +|++ ++.+.+++|++|.
T Consensus 229 ~ggg~v~vP~G~yl~~~~~~~gpc~~g~G~i~lkS-----nvt~L~L~~GA~l~g------------~i~~~~~~nv~It 291 (574)
T 1ogo_X 229 GAKSILYFPPGVYWMNQDQSGNSGKLGSNHIRLNS-----NTYWVYLAPGAYVKG------------AIEYFTKQNFYAT 291 (574)
T ss_dssp CSSSEEEECSEEEEECBCTTCCBSCSSSCCEECCT-----TCCEEEECTTEEEES------------CEEECCSSCEEEE
T ss_pred CCCCEEEECCcEEEEeccccCCcccccceEEEecC-----CCceEEecCCcEEEc------------cEEEeCceeEEEE
Confidence 578999999999999 5688886 898 9997 5 4442 4778889999999
Q ss_pred c-eEEeCCCCCcccccccCCCCCCCCceEEEEE------eecCeEEEEEEEecCCcceEEEeeeecE--EEEeEEEEcCC
Q 048431 125 G-GALDAKGTSLWACKTAAGSNCPNGATTLSIT------KSNNIRINGLLSLNSQMYHIVINRCQDV--LVEGAKIIAAG 195 (396)
Q Consensus 125 G-g~idg~g~~~w~~~~~~~~~~~~~p~~i~~~------~~~nv~i~~~~i~~~~~~~i~~~~~~nv--~i~n~~i~~~~ 195 (396)
| |+|||+|+.||......-.....||.++.|. +|+|++|+|++++|++.|++++..|+++ +|+|+++.++.
T Consensus 292 G~GtIDG~G~~ww~~~~~~~~~~~~rp~~i~~~~~~~~~~c~NV~I~Giti~NSp~w~i~~~~c~nV~~~I~nv~i~~~~ 371 (574)
T 1ogo_X 292 GHGILSGENYVYQANAGDNYIAVKSDSTSLRMWWHNNLGGGQTWYCVGPTINAPPFNTMDFNGNSGISSQISDYKQVGAF 371 (574)
T ss_dssp SSCEEECTTSCTTCBTTTTTBSCCCTTTBCCSEEECSCCSSEEEEEESCEEECCSSCSEEECSSSCEEEEEEEEEEECCC
T ss_pred eCEEEeCCCcccccccccccccccCCcceEEEEeccccCCceeEEEECeEEECCCCcEEeecCCCChhhEEEeeEeeCCC
Confidence 9 9999999999964321111233478888887 9999999999999999999999999999 99999998743
Q ss_pred CCCCCCCeeeeceeeEEEEecEEecCCceEEeCCCCccEEEEeeeEeCC--ce-EEEeeccccCCCCCEEEEEEEeeEEe
Q 048431 196 DSPNTDGIHVQQSRNVIIKSSSIKTGDDCISIGPGTNNLWIERVTCGPG--HG-ISIGSLAKDLDEEGVQNVTVFKTVFT 272 (396)
Q Consensus 196 ~~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~i~~~~~ni~i~n~~~~~~--~g-i~igs~g~~~~~~~~~ni~i~n~~~~ 272 (396)
.+++|||++. +||+|+||+|+++||||++++ +||+|+||+|..+ |+ +++||. .+.++||+|+||+|.
T Consensus 372 -~~nTDGIDi~--~NV~I~nc~I~~gDDcIaIks--~NI~I~nc~i~~g~g~g~IsIGS~-----~g~V~NV~v~N~~i~ 441 (574)
T 1ogo_X 372 -FFQTDGPEIY--PNSVVHDVFWHVNDDAIKIYY--SGASVSRATIWKCHNDPIIQMGWT-----SRDISGVTIDTLNVI 441 (574)
T ss_dssp -STTCCCCBCC--TTCEEEEEEEEESSCSEECCS--TTCEEEEEEEEECSSSCSEECCSS-----CCCEEEEEEEEEEEE
T ss_pred -CCCCccCccc--CCEEEEeeEEECCCCEEEECC--ccEEEEeEEEECCCCCceEEEcCC-----CCcEEEEEEEeEEEE
Confidence 3569999998 999999999999999999998 9999999998754 56 999983 578999999999998
Q ss_pred CCcc--------EEEEEeec--------CCCCceEEcEEEEeeEeecCCccEEEEeecCCCCCCCCCCCcceEEEeEEEE
Q 048431 273 GTTN--------GLRIKSWA--------RPSNGFVRGIRFIDALMQNVQHPIIIDQNYCPHNLNCPGQISGVKISDVIYQ 336 (396)
Q Consensus 273 ~~~~--------gi~i~~~~--------~~~~g~v~nI~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~nI~~~ 336 (396)
++.. +..+.+.. ..+.+ + ||+|+||+++++..++ +.. + +...++||+|+
T Consensus 442 ~~~~~~~~~~~~g~iiGs~~~y~~~~~~~~g~g-V-NI~f~NI~~~~v~~~i-i~i-~-----------p~~~I~nI~~~ 506 (574)
T 1ogo_X 442 HTRYIKSETVVPSAIIGASPFYASGMSPDSRKS-I-SMTVSNVVCEGLCPSL-FRI-T-----------PLQNYKNFVVK 506 (574)
T ss_dssp ECCCSSCCTTTTCEEEEECCCSSSSCCCEEEEE-E-EEEEEEEEECSSBCEE-EEE-C-----------CSEEEEEEEEE
T ss_pred CCcccceeccccceeeccccccccccccCCCce-E-EEEEEeEEEEceeEee-EEE-C-----------CCCCEEEEEEE
Confidence 8653 33322110 00234 8 9999999999998885 332 1 23479999999
Q ss_pred eEEEee------CCCeeEEEeeCCCCceecEEEEeEEEEe
Q 048431 337 DIRGTS------ATPIAIKFDCSTKYPCKGIRLHNVHLRH 370 (396)
Q Consensus 337 ni~~~~------~~~~~~~i~~~~~~~~~ni~~~ni~v~~ 370 (396)
||++++ ....+..+.+.+ .+|+||+|+||++..
T Consensus 507 NI~i~g~~~~~~~~~~~~~i~G~~-~~v~nI~~~NV~i~g 545 (574)
T 1ogo_X 507 NVAFPDGLQTNSIGTGESIIPAAS-GLTMGLAISAWTIGG 545 (574)
T ss_dssp EEEETTCBCCSTTCTTCEEECCCT-TCCEEEEEEEEEETT
T ss_pred eEEEeCccccccccccceeEecCC-CccceEEEEeEEEeC
Confidence 999876 222345566776 899999999999953
No 14
>3gq8_A Preneck appendage protein; beta helix, viral protein; HET: NHE; 2.00A {Bacillus phage PHI29} PDB: 3gq7_A* 3gq9_A* 3gqa_A
Probab=100.00 E-value=3e-38 Score=317.07 Aligned_cols=270 Identities=18% Similarity=0.179 Sum_probs=205.9
Q ss_pred cccEEEeeccCccCCCCcccHHHHHHHHHHHhhcCCCcEEEecCceEEE-eceeecccCCCCcEEEEEee----EEEeeC
Q 048431 27 TSTIYNVLRCGAKGNGITDSTQAFAKAWAAACASNESATIYVPKGRYLL-GSVAFRSECKSPSITFLING----TLVAPT 101 (396)
Q Consensus 27 ~~~~~~v~d~Ga~~dg~~d~t~aiq~Ai~~a~~~~~g~~v~iP~G~Y~~-~~l~l~~~~~~~n~~l~~~G----~l~~~~ 101 (396)
++..++|+||||++||.+|||+|||+||++ |++|+||+|+|++ ++|.|++ +++|.+++ +|+++.
T Consensus 19 ~~~~~nV~dfGA~gDG~tDdT~Aiq~Ai~~------Gg~V~iP~GtYlis~~l~l~s-----nv~L~g~g~~~t~L~~~~ 87 (609)
T 3gq8_A 19 KQFGVSVKTYGAKGDGVTDDIRAFEKAIES------GFPVYVPYGTFMVSRGIKLPS-----NTVLTGAGKRNAVIRFMD 87 (609)
T ss_dssp CSSSEEGGGGTCCCEEEEECHHHHHHHHHT------SSCEEECSEEEEESSCEEECS-----SEEEEESCTTTEEEEECT
T ss_pred CCcEEEeEecccCCCCCchhHHHHHHHHHc------CCEEEECCccEEEeCceEECC-----CcEEEEeeCCCCEEEeCC
Confidence 457899999999999999999999999963 3899999999999 8999986 89999985 677665
Q ss_pred CccccCCC-cceEEEeceeeEEEEceEEeCCCCCcccccccCCCCCCCCceEEEEEeecCeEEEEEEEecCCcceEEEee
Q 048431 102 DYRVLGQA-NNWLSFEGVSHVSIIGGALDAKGTSLWACKTAAGSNCPNGATTLSITKSNNIRINGLLSLNSQMYHIVINR 180 (396)
Q Consensus 102 ~~~~~~~~-~~~i~~~~~~nv~I~Gg~idg~g~~~w~~~~~~~~~~~~~p~~i~~~~~~nv~i~~~~i~~~~~~~i~~~~ 180 (396)
+...|... .+++.+.+++||+|+|++|||+++.||.... .....||.+|.|.+|+|++|+++++++++.+++.+..
T Consensus 88 ~~p~~~~li~~lI~a~~~~NItItG~TIDGNG~~~g~~~~---~~g~~RP~lI~f~~c~NV~I~gVti~NSp~~gI~I~~ 164 (609)
T 3gq8_A 88 SVGRGESLMYNENVTTGNENIFLSSFTLDGNNKRLGQGIS---GIGGSRESNLSIRACHNVYIRDIEAVDCTLHGIDITC 164 (609)
T ss_dssp TCCSSCCSEEESCTTTCCEEEEEEEEEEECCGGGGCSSCC---CSSTTTTCSEEEESCEEEEEEEEEEESCSSCSEEEEC
T ss_pred CCCCCCceeeeeeeecccccEEEEeeEEECCccccCcccc---cCCCCCccEEEEEeeceEEEEeeEEEeCCCCCeEEeC
Confidence 54433211 1234567899999999999999985443211 1234689999999999999999999999986655443
Q ss_pred eecEEEEeEEEEcCCCCCCCCCeeeec------eeeEEEEecEE-ecCCceEEeCCCCccEEEEeeeEeC------CceE
Q 048431 181 CQDVLVEGAKIIAAGDSPNTDGIHVQQ------SRNVIIKSSSI-KTGDDCISIGPGTNNLWIERVTCGP------GHGI 247 (396)
Q Consensus 181 ~~nv~i~n~~i~~~~~~~~~DGi~~~~------s~nv~I~n~~i-~~~dD~i~i~~~~~ni~i~n~~~~~------~~gi 247 (396)
+. + + ||+++++ |+||+|+||+| .++||||++++ ++||+|+||+|.. ++|+
T Consensus 165 ~~-------------~--N-DGid~DGi~fd~~S~NV~I~Nc~I~~tGDDcIaIks-seNI~I~Nc~~~gp~G~S~~~GI 227 (609)
T 3gq8_A 165 GG-------------L--D-YPYLGDGTTAPNPSENIWIENCEATGFGDDGITTHH-SQYINILNCYSHDPRLTANCNGF 227 (609)
T ss_dssp SS-------------S--S-CCCCCTTCCCSSCCEEEEEESCEEESCSSCSEEECS-CEEEEEESCEEECCSSCSSCCSE
T ss_pred CC-------------C--C-ccccCCCccccccceeEEEEeeEEEecCCCEEEecC-CeeEEEEeEEEECCCCCCCcccE
Confidence 32 2 2 5555555 99999999999 55999999988 9999999999953 3689
Q ss_pred EEeeccccCCCCCEEEEEEEeeEEeCCccEEEEEeecCCCCceEEcEEEEee-EeecCC-ccEEEEeecCCCCCCCCCCC
Q 048431 248 SIGSLAKDLDEEGVQNVTVFKTVFTGTTNGLRIKSWARPSNGFVRGIRFIDA-LMQNVQ-HPIIIDQNYCPHNLNCPGQI 325 (396)
Q Consensus 248 ~igs~g~~~~~~~~~ni~i~n~~~~~~~~gi~i~~~~~~~~g~v~nI~~~ni-~~~~~~-~~i~i~~~~~~~~~~~~~~~ 325 (396)
+||+. .+||+|+||++.++.+|++||++. ..+.++||.++|. .++++. +.+....++.. .++
T Consensus 228 sIGsg--------s~NVtV~Nc~i~nt~~GIrIKt~~--~~~~v~NV~I~n~vs~~nvrsyn~r~iG~~~a------~dp 291 (609)
T 3gq8_A 228 EIDDG--------SRHVVLSNNRSKGCYGGIEIKAHG--DAPAAYNISINGHMSVEDVRSYNFRHIGHHAA------TAP 291 (609)
T ss_dssp EECTT--------CEEEEEESEEEESSSEEEEEEECT--TSCCCEEEEEEEEEEESCSEEEEEEETTSCST------TSC
T ss_pred EccCC--------cccEEEEeeEEECCCCEEEEEecC--CCCccccEEEECCEeecCceEecceEEccccC------CCC
Confidence 99742 399999999999999999999864 5678999999985 555532 23333233221 111
Q ss_pred cceEEEeEEEEeEEEeeC
Q 048431 326 SGVKISDVIYQDIRGTSA 343 (396)
Q Consensus 326 ~~~~i~nI~~~ni~~~~~ 343 (396)
.....+||.++|+....+
T Consensus 292 ~s~~a~nV~l~n~~~~~p 309 (609)
T 3gq8_A 292 QSVSAKNIVASNLVSIRP 309 (609)
T ss_dssp CCSSCEEEEEEEEEEESC
T ss_pred CcceecceEeecceEEee
Confidence 223567888888876544
No 15
>1h80_A IOTA-carrageenase; hydrolase, IOTA-carrageenan double helix degradation; 1.6A {Alteromonas SP} SCOP: b.80.1.8 PDB: 1ktw_A* 3lmw_A
Probab=100.00 E-value=1.8e-37 Score=307.56 Aligned_cols=298 Identities=14% Similarity=0.156 Sum_probs=223.2
Q ss_pred ccccEEE-eeccCccCCCCcccHHHHHHHHHHHhhcC-CCcEEEecCceEEEeceeecccCCCCcEEEEEe--eEEEeeC
Q 048431 26 ATSTIYN-VLRCGAKGNGITDSTQAFAKAWAAACASN-ESATIYVPKGRYLLGSVAFRSECKSPSITFLIN--GTLVAPT 101 (396)
Q Consensus 26 ~~~~~~~-v~d~Ga~~dg~~d~t~aiq~Ai~~a~~~~-~g~~v~iP~G~Y~~~~l~l~~~~~~~n~~l~~~--G~l~~~~ 101 (396)
.+...++ |++|||++||.+|||+|||+||+ +|++. ++++|+||+|+|++++|.|++ +++|+++ ++|+++.
T Consensus 17 ~~~~~~~~V~dfGA~gDG~tDdT~Aiq~Aid-ac~~~~ggg~V~vP~GtYl~g~I~lks-----~v~L~l~~GatL~~s~ 90 (464)
T 1h80_A 17 QQDVNYDLVDDFGANGNDTSDDSNALQRAIN-AISRKPNGGTLLIPNGTYHFLGIQMKS-----NVHIRVESDVIIKPTW 90 (464)
T ss_dssp CCSEEEEHHHHHCCCTTSSSBCHHHHHHHHH-HHHTSTTCEEEEECSSEEEECSEECCT-----TEEEEECTTCEEEECC
T ss_pred CCcceeeehhccCcCCCCCchhHHHHHHHHH-HHhhccCCcEEEECCCeEEEeeEeccC-----ceEEEEcCCcEEEecc
Confidence 3466788 99999999999999999999996 46665 789999999999999999986 8999998 4888776
Q ss_pred C--ccccCCCcceEEE---eceeeEEEEc-e---EEeCCCCCcccccccCCCCCCCCceEEEEEeecCeEEEEEEEecCC
Q 048431 102 D--YRVLGQANNWLSF---EGVSHVSIIG-G---ALDAKGTSLWACKTAAGSNCPNGATTLSITKSNNIRINGLLSLNSQ 172 (396)
Q Consensus 102 ~--~~~~~~~~~~i~~---~~~~nv~I~G-g---~idg~g~~~w~~~~~~~~~~~~~p~~i~~~~~~nv~i~~~~i~~~~ 172 (396)
+ ...|+ ++.+ .+++|++|.| | +|||+|.. ..+|.++.|.+|+|++|++++++|
T Consensus 91 ~td~~~y~----~~~~~~~~~~~nItI~G~Gg~~~iDG~G~~------------~~rp~~i~~~~~~Nv~I~gIti~n-- 152 (464)
T 1h80_A 91 NGDGKNHR----LFEVGVNNIVRNFSFQGLGNGFLVDFKDSR------------DKNLAVFKLGDVRNYKISNFTIDD-- 152 (464)
T ss_dssp CTTCSCEE----EEEESSSSCEEEEEEEECTTCEEEECTTCS------------CCBEEEEEECSEEEEEEEEEEEEC--
T ss_pred CCCcccCC----ceEeecccCccceEEECcCcceEEeCCCCC------------CCCceEEEEEeeccEEEeeeEEec--
Confidence 3 44443 3333 6799999999 8 88888752 247899999999999999999999
Q ss_pred cceEEEeeeecEEEEeEEEEcCCCCCCCCCeeeeceeeEEEEecEEecCCceEE--eCCCCccEEEEeeeEeCCceEEEe
Q 048431 173 MYHIVINRCQDVLVEGAKIIAAGDSPNTDGIHVQQSRNVIIKSSSIKTGDDCIS--IGPGTNNLWIERVTCGPGHGISIG 250 (396)
Q Consensus 173 ~~~i~~~~~~nv~i~n~~i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~--i~~~~~ni~i~n~~~~~~~gi~ig 250 (396)
.|.++ .|.++.+ .++||+++ .|+||+|+||.|.++||++. ...+++||+|+||+|.+++|+.|+
T Consensus 153 ~w~ih--~s~~V~i-----------~NtDGi~i-~s~nV~I~n~~I~~gddgiGs~~~~~~~NV~V~n~~~~gg~GIrIk 218 (464)
T 1h80_A 153 NKTIF--ASILVDV-----------TERNGRLH-WSRNGIIERIKQNNALFGYGLIQTYGADNILFRNLHSEGGIALRME 218 (464)
T ss_dssp CSCBS--CSEEECE-----------EEETTEEE-EEEEEEEEEEEEESCCTTCEEEEESEEEEEEEEEEEEESSEEEEEE
T ss_pred cceEe--eceeeee-----------ecCCCcee-eccCEEEeceEEecCCCeEEecccCCEeEEEEEeeEEECCCEEEEE
Confidence 45533 3333322 15799998 88999999999999998774 234589999999999998899987
Q ss_pred ecc----ccCCCCCEEEEEEEeeEEeCCccEEEEEeecCCCCceEEcEEEEeeEeecCCccEEEEeecCCCCCCCCCCCc
Q 048431 251 SLA----KDLDEEGVQNVTVFKTVFTGTTNGLRIKSWARPSNGFVRGIRFIDALMQNVQHPIIIDQNYCPHNLNCPGQIS 326 (396)
Q Consensus 251 s~g----~~~~~~~~~ni~i~n~~~~~~~~gi~i~~~~~~~~g~v~nI~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~ 326 (396)
+.+ .. ..+.++||+|+||+|.+...++.|++. .+.++||+|+||++.++..++.+.+.|.+... +.
T Consensus 219 tg~d~IG~~-~~g~v~NI~~~Ni~~~nv~~~I~I~p~----~~~isnItfeNI~~t~~~~aI~i~q~y~~~fd-----~~ 288 (464)
T 1h80_A 219 TDNLLMKNY-KQGGIRNIFADNIRCSKGLAAVMFGPH----FMKNGDVQVTNVSSVSCGSAVRSDSGFVELFS-----PT 288 (464)
T ss_dssp CCCHHHHHH-TCCEEEEEEEEEEEEESSSEEEEEECT----TCBCCCEEEEEEEEESSSCSEEECCCCCEECC-------
T ss_pred eCCceeccC-CCCcEEEEEEEeEEEECCceeEEEeCC----CceEeEEEEEEEEEEccceeEEEecCcccccC-----cc
Confidence 541 11 246799999999999999999999942 35789999999999999999999988775322 12
Q ss_pred ceEEEeEEEEeEE------Eee---------CCCeeEEEeeC-------------CCCceecEEEEeEEEEec
Q 048431 327 GVKISDVIYQDIR------GTS---------ATPIAIKFDCS-------------TKYPCKGIRLHNVHLRHL 371 (396)
Q Consensus 327 ~~~i~nI~~~ni~------~~~---------~~~~~~~i~~~-------------~~~~~~ni~~~ni~v~~~ 371 (396)
+....+..|+|.. +.. ....++.+.|. +....++++++||++...
T Consensus 289 ~~~~~~~~~~~~~e~~~~~G~~~~~~~~~ng~~~~~~~i~~~~~~~~~~~~~~~~~~g~~~~~~~~nv~~~~g 361 (464)
T 1h80_A 289 DEVHTRQSWKQAVESKLGRGCAQTPYARGNGGTRWAARVTQKDACLDKAKLEYGIEPGSFGTVKVFDVTARFG 361 (464)
T ss_dssp -------------------CCBCCC----------CEEBCSCHHHHHHHHHHTCCCCCBCSSEEEEEEEEECC
T ss_pred ccccccceeccccccccccCceeEEEeccCCcccCceEEccccceeccccccccccCCceEEEEEEEEEeccC
Confidence 2256677777665 221 11245666664 566788999999999763
No 16
>3gqn_A Preneck appendage protein; beta helix, beta barrel, ATP binding, viral protein; HET: ATP; 2.15A {Bacillus phage PHI29} PDB: 3suc_A*
Probab=100.00 E-value=3.3e-38 Score=321.14 Aligned_cols=270 Identities=18% Similarity=0.193 Sum_probs=204.5
Q ss_pred cccEEEeeccCccCCCCcccHHHHHHHHHHHhhcCCCcEEEecCceEEE-eceeecccCCCCcEEEEEee----EEEeeC
Q 048431 27 TSTIYNVLRCGAKGNGITDSTQAFAKAWAAACASNESATIYVPKGRYLL-GSVAFRSECKSPSITFLING----TLVAPT 101 (396)
Q Consensus 27 ~~~~~~v~d~Ga~~dg~~d~t~aiq~Ai~~a~~~~~g~~v~iP~G~Y~~-~~l~l~~~~~~~n~~l~~~G----~l~~~~ 101 (396)
++..++|++|||++||.+|||+|||+||++ |++|+||+|+|++ ++|.|++ +++|.+++ +|+++.
T Consensus 19 ~~~~~nV~dfGA~gDG~tDdT~Aiq~Ai~a------Gg~V~IPaGtYlisg~I~L~s-----nv~L~Geg~~~t~Lk~~~ 87 (772)
T 3gqn_A 19 KQFGVSVKTYGAKGDGVTDDIRAFEKAIES------GFPVYVPYGTFMVSRGIKLPS-----NTVLTGAGKRNAVIRFMD 87 (772)
T ss_dssp CSSSEESGGGTCCCEEEEECHHHHHHHHHT------TSCEEECSEEEEESSCEEECS-----SCEEEEEEEEEEEEEECT
T ss_pred CCcEEEeEecccCCCCChhHHHHHHHHHHc------CCEEEECCccEEEEeEEEECC-----CcEEEEecCCCCEEEeCC
Confidence 467899999999999999999999999962 3899999999999 8999986 89999886 566665
Q ss_pred CccccCCC-cceEEEeceeeEEEEceEEeCCCCCcccccccCCCCCCCCceEEEEEeecCeEEEEEEEecCCcceEEEee
Q 048431 102 DYRVLGQA-NNWLSFEGVSHVSIIGGALDAKGTSLWACKTAAGSNCPNGATTLSITKSNNIRINGLLSLNSQMYHIVINR 180 (396)
Q Consensus 102 ~~~~~~~~-~~~i~~~~~~nv~I~Gg~idg~g~~~w~~~~~~~~~~~~~p~~i~~~~~~nv~i~~~~i~~~~~~~i~~~~ 180 (396)
+...+... .+|+.+.+++||+|.|++|||+++.||.... .....||.+|.|.+|+|++|++++++|++.+++.+
T Consensus 88 d~p~~~~li~~lI~a~gveNItItG~TIDGNG~~~g~~~~---~~g~~RP~lI~f~~ckNV~I~gVti~NSp~~gI~I-- 162 (772)
T 3gqn_A 88 SVGRGESLMYNENVTTGNENIFLSSFTLDGNNKRLGQGIS---GIGGSRESNLSIRACHNVYIRDIEAVDCTLHGIDI-- 162 (772)
T ss_dssp TCCSSCCSEEESCTTTCCEEEEEEEEEEECCGGGGCSSCC---CSSTTTTCSEEEESCEEEEEEEEEEESCSSCSEEE--
T ss_pred CCCCCCceeeeeeeccCceeEEEEeeEEeCCccccCcccc---cCCCCCccEEEEEeeceEEEEeEEEEeCCCCCEEE--
Confidence 54433211 1234567899999999999999994443211 12346899999999999999999999999865544
Q ss_pred eecEEEEeEEEEcCCCCCCCCCeeeec------eeeEEEEecEE-ecCCceEEeCCCCccEEEEeeeEeC------CceE
Q 048431 181 CQDVLVEGAKIIAAGDSPNTDGIHVQQ------SRNVIIKSSSI-KTGDDCISIGPGTNNLWIERVTCGP------GHGI 247 (396)
Q Consensus 181 ~~nv~i~n~~i~~~~~~~~~DGi~~~~------s~nv~I~n~~i-~~~dD~i~i~~~~~ni~i~n~~~~~------~~gi 247 (396)
.++.+ | ||+++++ |+||+|+||+| .++||||++++ ++||+|+||+|.. ++|+
T Consensus 163 -----------~np~~--N-DGid~DGi~fdi~S~NV~I~Nc~I~ntGDDcIAIks-SeNI~I~Nc~c~gphG~S~~~GI 227 (772)
T 3gqn_A 163 -----------TCGGL--D-YPYLGDGTTAPNPSENIWIENCEATGFGDDGITTHH-SQYINILNCYSHDPRLTANCNGF 227 (772)
T ss_dssp -----------ECSSS--S-CCCCCTTCCCSSCCEEEEEESCEEESCSSCSEEECS-CEEEEEESCEEECCSSSSSCCSE
T ss_pred -----------eCCCc--C-CcCCCcCcccccccceEEEEeeEEEecCcCeEEecC-CceEEEEeEEEECCCCCCCcccE
Confidence 33332 2 5555555 99999999999 45999999988 9999999999953 3689
Q ss_pred EEeeccccCCCCCEEEEEEEeeEEeCCccEEEEEeecCCCCceEEcEEEEe-eEeecCC-ccEEEEeecCCCCCCCCCCC
Q 048431 248 SIGSLAKDLDEEGVQNVTVFKTVFTGTTNGLRIKSWARPSNGFVRGIRFID-ALMQNVQ-HPIIIDQNYCPHNLNCPGQI 325 (396)
Q Consensus 248 ~igs~g~~~~~~~~~ni~i~n~~~~~~~~gi~i~~~~~~~~g~v~nI~~~n-i~~~~~~-~~i~i~~~~~~~~~~~~~~~ 325 (396)
+||+. .+||+|+||++.++.+|++||++. +++.++||.+.| +.++++. +.+....++.. .++
T Consensus 228 sIGsg--------s~NVtV~Nc~~~nT~nGIRIKt~~--~gg~v~NV~I~gnis~~dvrsynir~iG~h~a------~dp 291 (772)
T 3gqn_A 228 EIDDG--------SRHVVLSNNRSKGCYGGIEIKAHG--DAPAAYNISINGHMSVEDVRSYNFRHIGHHAA------TAP 291 (772)
T ss_dssp EECTT--------CEEEEEEEEEEESSSEEEEECCCT--TSCCCEEEEEEEEEEESCSEEEEECCTTSCSS------SSC
T ss_pred EecCC--------cccEEEEceEEECCCcEEEEEEeC--CCCccccEEEECCEEeccCeEecceEEccccC------CCC
Confidence 99742 399999999999999999999763 677899999985 6666542 22222122111 111
Q ss_pred cceEEEeEEEEeEEEeeC
Q 048431 326 SGVKISDVIYQDIRGTSA 343 (396)
Q Consensus 326 ~~~~i~nI~~~ni~~~~~ 343 (396)
......||.++|+.....
T Consensus 292 ~s~~a~nV~l~n~~~~~P 309 (772)
T 3gqn_A 292 QSVSAKNIVASNLVSIRP 309 (772)
T ss_dssp CCSSCEEEEEEEEEEESC
T ss_pred CCccCccEEeecceEEcc
Confidence 223567888888776544
No 17
>2pyg_A Poly(beta-D-mannuronate) C5 epimerase 4; beta-helix, isomerase; 2.10A {Azotobacter vinelandii} PDB: 2pyh_A*
Probab=99.97 E-value=8.1e-29 Score=242.77 Aligned_cols=298 Identities=14% Similarity=0.193 Sum_probs=183.7
Q ss_pred EEEeeccCccCCCCcccHHHHHHHHHHHhhcCCCcEEEecCceEEE--------eceeecccCCCCcEEEEEee----EE
Q 048431 30 IYNVLRCGAKGNGITDSTQAFAKAWAAACASNESATIYVPKGRYLL--------GSVAFRSECKSPSITFLING----TL 97 (396)
Q Consensus 30 ~~~v~d~Ga~~dg~~d~t~aiq~Ai~~a~~~~~g~~v~iP~G~Y~~--------~~l~l~~~~~~~n~~l~~~G----~l 97 (396)
.++|++|||++||.+|||+|||+||++||+ .++++|+||+|+|++ ++|.+++ +++|.++| +|
T Consensus 2 ~~~v~~~ga~~dg~~ddt~aiq~Ai~~a~~-~gg~~v~~p~G~y~~~~~~~~~~g~l~~~~-----~v~l~g~g~~~t~l 75 (377)
T 2pyg_A 2 DYNVKDFGALGDGVSDDRASIQAAIDAAYA-AGGGTVYLPAGEYRVSAAGEPGDGCLMLKD-----GVYLAGAGMGETVI 75 (377)
T ss_dssp CEEGGGGTCCCEEEEECHHHHHHHHHHHHH-TTSEEEEECSEEEEECCCSSGGGCSEECCT-----TEEEEESSBTTEEE
T ss_pred EeeeeecCCCCCCCcchHHHHHHHHHHHHh-cCCCEEEECCeEEEEcccccCCcccEEecC-----CeEEEEcCCCCcEE
Confidence 589999999999999999999999988754 578999999999998 4788876 99999985 44
Q ss_pred EeeCCccccCCC------cceEEEeceeeEEEEc------eEEeCCCCCcccccccCCCCCCCCceEEEEEeecCeEEEE
Q 048431 98 VAPTDYRVLGQA------NNWLSFEGVSHVSIIG------GALDAKGTSLWACKTAAGSNCPNGATTLSITKSNNIRING 165 (396)
Q Consensus 98 ~~~~~~~~~~~~------~~~i~~~~~~nv~I~G------g~idg~g~~~w~~~~~~~~~~~~~p~~i~~~~~~nv~i~~ 165 (396)
++..+...++.. +.-....+.+|++|.| |++|| ||...... .+..|++++|++
T Consensus 76 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~I~G~~~~~~G~idG----w~~~~~~~-----------~~~~~~nv~I~~ 140 (377)
T 2pyg_A 76 KLIDGSDQKITGMVRSAYGEETSNFGMRDLTLDGNRDNTSGKVDG----WFNGYIPG-----------GDGADRDVTIER 140 (377)
T ss_dssp EECTTCBSCEEEEEECCTTSCCEEEEEEEEEEECCGGGCBSCEEE----EEECSCTT-----------SSCCEEEEEEEE
T ss_pred EecCCCccCccceEeccCCCcceEEEEEEEEEECCCccCCccccc----eecccCcc-----------ccccccceEEEe
Confidence 555443322110 1011334678889988 45665 78643210 124689999999
Q ss_pred EEEecCCcceEEEeeee-cEEEEeEEEEcCCC-------------------CCCCCCeeeec-eeeEEEEecEEecCCce
Q 048431 166 LLSLNSQMYHIVINRCQ-DVLVEGAKIIAAGD-------------------SPNTDGIHVQQ-SRNVIIKSSSIKTGDDC 224 (396)
Q Consensus 166 ~~i~~~~~~~i~~~~~~-nv~i~n~~i~~~~~-------------------~~~~DGi~~~~-s~nv~I~n~~i~~~dD~ 224 (396)
+++++++.|++++..|. +++++|+.+..... .++.|||++.. |++++|+|+.+...+++
T Consensus 141 ~~i~n~~~~gi~~~~~~~~~~i~n~~~~~~~~dGI~~~~s~~~~i~~N~~~~~~~~GI~~~~~s~~v~I~nN~i~~~~~g 220 (377)
T 2pyg_A 141 VEVREMSGYGFDPHEQTINLTIRDSVAHDNGLDGFVADYLVDSVFENNVAYANDRHGFNVVTSTHDFVMTNNVAYGNGSS 220 (377)
T ss_dssp EEEECCSSCSEEECSSEEEEEEESCEEESCSSCSEEEESEEEEEEESCEEESCSSCSEEEETTCEEEEEESCEEESCSSC
T ss_pred EEEEecccceEEeecccCCeEEEeEEeecCCCCceeEeccCCcEEECcEEEccccCcEEEEeccCCeEEECCEEECccCc
Confidence 99999999999998764 78888887754110 12345555443 45555555555554444
Q ss_pred EEeC-------CCCccEEEEeeeEeC--CceEEEeeccccCCCCCEEEEEEEeeEEeCC-ccEEEEEeecCCCCceEEcE
Q 048431 225 ISIG-------PGTNNLWIERVTCGP--GHGISIGSLAKDLDEEGVQNVTVFKTVFTGT-TNGLRIKSWARPSNGFVRGI 294 (396)
Q Consensus 225 i~i~-------~~~~ni~i~n~~~~~--~~gi~igs~g~~~~~~~~~ni~i~n~~~~~~-~~gi~i~~~~~~~~g~v~nI 294 (396)
+.+. ..+++++|+++.+.. ++|+.+. .+++++|+|+++.++ ..|++|+. .+++
T Consensus 221 ~~~~~~g~~~~~~s~nv~i~~N~~~~n~~~Gi~~~---------~~~~v~i~~N~i~~~~~~GI~i~g--------~~~~ 283 (377)
T 2pyg_A 221 GLVVQRGLEDLALPSNILIDGGAYYDNAREGVLLK---------MTSDITLQNADIHGNGSSGVRVYG--------AQDV 283 (377)
T ss_dssp SEEEECCSSCCCCCEEEEEESCEEESCSSCSEEEE---------EEEEEEEESCEEESCSSCSEEEEE--------EEEE
T ss_pred eEEEeccccCCCCCccEEEECCEEEcCccCceEec---------cccCeEEECCEEECCCCceEEEec--------CCCc
Confidence 4441 224555555555443 2344432 246777777777776 66777762 5677
Q ss_pred EEEeeEeecCCc----cEEEEeecCCCCCCCCCCCcceEEEeEEEEeEEEeeC--CCeeEEEeeCCCCceecEEEEeEEE
Q 048431 295 RFIDALMQNVQH----PIIIDQNYCPHNLNCPGQISGVKISDVIYQDIRGTSA--TPIAIKFDCSTKYPCKGIRLHNVHL 368 (396)
Q Consensus 295 ~~~ni~~~~~~~----~i~i~~~~~~~~~~~~~~~~~~~i~nI~~~ni~~~~~--~~~~~~i~~~~~~~~~ni~~~ni~v 368 (396)
+|+|.++.+... +..+.+.|........ ....-+++++++.++... ....+.+.+ ..+++++|+|..+
T Consensus 284 ~i~~N~i~~n~~~~~~~~v~~~~~~~~~~~~~---~~~~~~~~~i~~N~i~g~~~~~~~i~~~~---~~~~~~~i~~n~i 357 (377)
T 2pyg_A 284 QILDNQIHDNAQAAAVPEVLLQSFDDTAGASG---TYYTTLNTRIEGNTISGSANSTYGIQERN---DGTDYSSLIDNDI 357 (377)
T ss_dssp EEESCEEESCCSSSSCCSEEEECEEETTSSSC---EEECCBCCEEESCEEECCSSCCEEEEECS---SSCBCCEEESCEE
T ss_pred EEECcEEECCcccccccceEEEEecCCCccce---eeeeccCeEEECCEEECcCCCccceEEcc---CCCccEEEECcEE
Confidence 777777776532 2222222322110000 000124555555555542 223444433 4567888888888
Q ss_pred Eec
Q 048431 369 RHL 371 (396)
Q Consensus 369 ~~~ 371 (396)
...
T Consensus 358 ~~~ 360 (377)
T 2pyg_A 358 AGV 360 (377)
T ss_dssp ESS
T ss_pred eCC
Confidence 744
No 18
>2vbk_A Tailspike-protein; viral adhesion protein, viral protein, hydrolase, endorhamnosidase, right-handed parallel beta-helix; 1.25A {Enterobacteria phage SF6} PDB: 2vbe_A 2vbm_A*
Probab=99.97 E-value=8.8e-31 Score=248.83 Aligned_cols=211 Identities=16% Similarity=0.190 Sum_probs=162.5
Q ss_pred ccEEEeeccCccCCCCcccHHHHHHHHHHHhhcCCCcEEEecCc----eEEEe-ceeecccCCCCcEEEEEee--EEEee
Q 048431 28 STIYNVLRCGAKGNGITDSTQAFAKAWAAACASNESATIYVPKG----RYLLG-SVAFRSECKSPSITFLING--TLVAP 100 (396)
Q Consensus 28 ~~~~~v~d~Ga~~dg~~d~t~aiq~Ai~~a~~~~~g~~v~iP~G----~Y~~~-~l~l~~~~~~~n~~l~~~G--~l~~~ 100 (396)
+..++|+||||++||.+|||+|||+||++||+..+|++||||+| +|+++ ++.|++ +++|.+++ .+.++
T Consensus 49 s~~~NVkDFGAkGDGvTDDTaAIQkAIdaA~a~~GGGtVyVPaG~~~~tYlvt~tI~LkS-----nV~L~Ge~~AtIl~s 123 (514)
T 2vbk_A 49 KEAISILDFGVIDDGVTDNYQAIQNAIDAVASLPSGGELFIPASNQAVGYIVGSTLLIPG-----GVNIRGVGKASQLRA 123 (514)
T ss_dssp TTCCBGGGGCCCCSSSSCCHHHHHHHHHHHHTSTTCEEEECCCCSSTTCEEESSCEEECT-----TEEEECCSTTSEEEE
T ss_pred CcEEEeeccCcCCCCCcccHHHHHHHHHHHhhcCCCeEEEECCCCcceeEEECCeEEecC-----CeEEEEecCceEeec
Confidence 46899999999999999999999999998877668899999999 99885 688886 99999985 44432
Q ss_pred CCc-cc-c--CCCcceEEEeceeeEEEEc-eEEeCCCCCcccccccCCCCCCCCceEEEEEeecCeEEEEEEE--ecCCc
Q 048431 101 TDY-RV-L--GQANNWLSFEGVSHVSIIG-GALDAKGTSLWACKTAAGSNCPNGATTLSITKSNNIRINGLLS--LNSQM 173 (396)
Q Consensus 101 ~~~-~~-~--~~~~~~i~~~~~~nv~I~G-g~idg~g~~~w~~~~~~~~~~~~~p~~i~~~~~~nv~i~~~~i--~~~~~ 173 (396)
... .. . +.-.+++.+.+++|++|.| |+|||++..|+.. . ...|+ .....++++.+++++. .+++.
T Consensus 124 ~~~I~GtIia~~y~s~I~~~~VeNIaITG~GTIDG~g~n~t~e-~-----~~~Rq--~~~~~fdnV~Vn~Vt~~v~~Sg~ 195 (514)
T 2vbk_A 124 KSGLTGSVLRLSYDSDTIGRYLRNIRVTGNNTCNGIDTNITAE-D-----SVIRQ--VYGWVFDNVMVNEVETAYLMQGL 195 (514)
T ss_dssp CTTCCSEEEEECCCSCCSCEEEESCEEECCSSSEEEEESCCTT-C-----SSCCC--EESEEEESCEEEEEEEEEEEESE
T ss_pred cccccccEEeccCCccccccCceEEEEECCCeEeCCCCCcccc-c-----eeeec--cceEEeeeEEEEeEEEeEeccCc
Confidence 211 00 0 0012356677899999999 9999987654211 1 01122 2222367999999965 46788
Q ss_pred ceEEEeeeecEEEE-eEEEEcCCCCCCCCCeeeeceeeEEEEecEEecCCceEEeCCC-----------CccEEEEeeeE
Q 048431 174 YHIVINRCQDVLVE-GAKIIAAGDSPNTDGIHVQQSRNVIIKSSSIKTGDDCISIGPG-----------TNNLWIERVTC 241 (396)
Q Consensus 174 ~~i~~~~~~nv~i~-n~~i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~i~~~-----------~~ni~i~n~~~ 241 (396)
|++++..|++++++ ++++. .+|+||+|.||.|+.|||||++++| ++|+.
T Consensus 196 WTIhPi~Cqnvt~r~gL~f~-------------eSCrNV~IsnC~FsVGDdciaiksGk~~~~~~~~~~se~~~------ 256 (514)
T 2vbk_A 196 WHSKFIACQAGTCRVGLHFL-------------GQCVSVSVSSCHFSRGNYSADESFGIRIQPQTYAWSSEAVR------ 256 (514)
T ss_dssp EEEEEESCEEEEEEEEEEEE-------------SCCEEEEEESCEEECTTSCCTTCEEEEEECBCCTTTSSCBC------
T ss_pred EEEeEeccCceecccCcccc-------------CCCCeEEEeccEEecCcceeeeecCceecccccCCcchhcc------
Confidence 99999999999988 55554 3799999999999999999999996 56665
Q ss_pred eCCce-EEEeeccccCCCCCEEE-EEEEeeEEeCCcc
Q 048431 242 GPGHG-ISIGSLAKDLDEEGVQN-VTVFKTVFTGTTN 276 (396)
Q Consensus 242 ~~~~g-i~igs~g~~~~~~~~~n-i~i~n~~~~~~~~ 276 (396)
|| +.|||+. +.++++| +++++|.|.+++.
T Consensus 257 ---hgav~igSE~---m~~Gvk~~v~v~~Clf~~td~ 287 (514)
T 2vbk_A 257 ---SEAIILDSET---MCIGFKNAVYVHDCLDLHMEQ 287 (514)
T ss_dssp ---CEEEEEESSE---EEESCSEEEEESCCEEEEEES
T ss_pred ---cccEEECchh---hcccccccEEEEeeeccCCcc
Confidence 76 9999974 3468999 9999999998753
No 19
>3jur_A EXO-poly-alpha-D-galacturonosidase; beta-helix, cell WALL biogenesis/degradation, glycosidase; 2.05A {Thermotoga maritima}
Probab=99.93 E-value=3.8e-25 Score=219.42 Aligned_cols=228 Identities=13% Similarity=0.176 Sum_probs=179.7
Q ss_pred ceEEEeceeeEEEEc-eEEeCCCCCcccccccCCCCCCCCceEEEEEeecCeEEEEEEEecC--CcceEEEeeeecEEEE
Q 048431 111 NWLSFEGVSHVSIIG-GALDAKGTSLWACKTAAGSNCPNGATTLSITKSNNIRINGLLSLNS--QMYHIVINRCQDVLVE 187 (396)
Q Consensus 111 ~~i~~~~~~nv~I~G-g~idg~g~~~w~~~~~~~~~~~~~p~~i~~~~~~nv~i~~~~i~~~--~~~~i~~~~~~nv~i~ 187 (396)
.++.+.+++|++|+| ...+.. .+.+++..|+|++|+++++.++ ..+++++..|+||+|+
T Consensus 191 ~~i~~~~~~nv~i~giti~nsp------------------~~~i~~~~~~nv~i~~v~I~~~~~NtDGidi~~s~nV~I~ 252 (448)
T 3jur_A 191 SFVQFYRCRNVLVEGVKIINSP------------------MWCIHPVLSENVIIRNIEISSTGPNNDGIDPESCKYMLIE 252 (448)
T ss_dssp CSEEEESCEEEEEESCEEESCS------------------SCSEEEESCEEEEEESCEEEECSTTCCSBCCBSCEEEEEE
T ss_pred eEEEEEcccceEEEeeEEEeCC------------------CceEeeeccCCEEEEeEEEeeccCCCccccccCCcCEEEE
Confidence 468999999999999 444431 2368999999999999999984 4578999999999999
Q ss_pred eEEEEcCCC------CCCCCCeeeec-eeeEEEEecEE--ecCCceEEeCCC----CccEEEEeeeEeCC-ceEEEeecc
Q 048431 188 GAKIIAAGD------SPNTDGIHVQQ-SRNVIIKSSSI--KTGDDCISIGPG----TNNLWIERVTCGPG-HGISIGSLA 253 (396)
Q Consensus 188 n~~i~~~~~------~~~~DGi~~~~-s~nv~I~n~~i--~~~dD~i~i~~~----~~ni~i~n~~~~~~-~gi~igs~g 253 (396)
|++|.+.+| +.+.||+++.. |+||+|+||++ ..+++|+++++. .+||+|+||++.+. +|+.|++..
T Consensus 253 n~~i~~gDDcIaiksg~~~dg~~~~~ps~nI~I~n~~~~~~~gh~gisiGS~~~~~v~nV~v~n~~~~~t~~GirIKt~~ 332 (448)
T 3jur_A 253 KCRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSEMSGGVRNVVARNNVYMNVERALRLKTNS 332 (448)
T ss_dssp SCEEEESSEEEEEBCCCHHHHHHHCCCEEEEEEESCEEECSSCSEEEEECSSCTTCEEEEEEESCEEESCSEEEEEECCT
T ss_pred eeEEEeCCCcEEeccCccccccccCCCceeEEEEEeEEecCCCcceEEECCcccCcEEEEEEEEEEEecccceEEEEEEc
Confidence 999998553 12334444432 89999999999 456669999874 59999999999876 699999864
Q ss_pred ccCCCCCEEEEEEEeeEEeCCccEE-EEEeecC----CCCceEEcEEEEeeEeecCCccEEEEeecCCCCCCCCCCCcce
Q 048431 254 KDLDEEGVQNVTVFKTVFTGTTNGL-RIKSWAR----PSNGFVRGIRFIDALMQNVQHPIIIDQNYCPHNLNCPGQISGV 328 (396)
Q Consensus 254 ~~~~~~~~~ni~i~n~~~~~~~~gi-~i~~~~~----~~~g~v~nI~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~ 328 (396)
.+ .+.++||+|+|++|.+..+++ .|+.... ...+.++||+|+||+.++...++.+... +..
T Consensus 333 g~--gG~v~nI~f~ni~m~~v~~~~i~I~~~Y~~~~~~~~~~i~nI~~~NI~~t~~~~~i~i~g~------------~~~ 398 (448)
T 3jur_A 333 RR--GGYMENIFFIDNVAVNVSEEVIRINLRYDNEEGEYLPVVRSVFVKNLKATGGKYAVRIEGL------------END 398 (448)
T ss_dssp TT--CSEEEEEEEESCEEEEESSEEEEEESCGGGCCCSCCCEEEEEEEESCEEEECSEEEEEECB------------TTB
T ss_pred CC--CceEeeEEEEEEEEECCccccEEEEeeccCCCCCCCceEEEEEEEeEEEEecceEEEEEeC------------CCC
Confidence 33 367999999999999998888 8987542 2456899999999999987778777532 234
Q ss_pred EEEeEEEEeEEEeeCCCeeEEEee----CCCCceecEEEEeEEEEec
Q 048431 329 KISDVIYQDIRGTSATPIAIKFDC----STKYPCKGIRLHNVHLRHL 371 (396)
Q Consensus 329 ~i~nI~~~ni~~~~~~~~~~~i~~----~~~~~~~ni~~~ni~v~~~ 371 (396)
+++||+|+||+++.... +..+.. .+...++||+|+||+|..+
T Consensus 399 p~~~I~~~nv~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~nv~ing~ 444 (448)
T 3jur_A 399 YVKDILISDTIIEGAKI-SVLLEFGQLGMENVIMNGSRFEKLYIEGK 444 (448)
T ss_dssp CEEEEEEEEEEEESCSE-EEEEEEEEEEEEEEEETTEEEEEEEEEEE
T ss_pred CEeeEEEEEEEEEcccc-ceeEeccccccccceecccEEEEEEEcCE
Confidence 79999999999997754 444433 3445689999999999743
No 20
>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A*
Probab=99.90 E-value=3.9e-22 Score=205.51 Aligned_cols=247 Identities=13% Similarity=0.122 Sum_probs=195.3
Q ss_pred ceEEEeceeeEEEEc-eEEeCCCCCcccccccCCCCCCCCceEEEEEeecCeEEEEEEEec--C-CcceEEEeeeecEEE
Q 048431 111 NWLSFEGVSHVSIIG-GALDAKGTSLWACKTAAGSNCPNGATTLSITKSNNIRINGLLSLN--S-QMYHIVINRCQDVLV 186 (396)
Q Consensus 111 ~~i~~~~~~nv~I~G-g~idg~g~~~w~~~~~~~~~~~~~p~~i~~~~~~nv~i~~~~i~~--~-~~~~i~~~~~~nv~i 186 (396)
.++.+.+++|++|+| ...+.. .+.+++.+|+|++|+++++.. + ..+++++..|+||+|
T Consensus 332 ~~i~~~~~~nv~I~giti~ns~------------------~~~i~~~~~~nv~i~~v~i~~~~~~NtDGidi~~s~nV~I 393 (608)
T 2uvf_A 332 SLMTLRGVENVYLAGFTVRNPA------------------FHGIMNLENHNVVANGLIHQTYDANNGDGIEFGNSQNVMV 393 (608)
T ss_dssp CSEEEESEEEEEEESCEEECCS------------------SCSEEEESCEEEEEESCEEECTTCTTCCSEEEESCEEEEE
T ss_pred eEEEEEeeeeEEEeCcEEecCC------------------CCEEEEecCCCEEEeeEEEcCCCCCCCCeEEecCCceEEE
Confidence 468899999999999 444321 246899999999999999875 2 357899999999999
Q ss_pred EeEEEEcCCC------CCCCCCeeeeceeeEEEEecEEecCCceEEeCCC----CccEEEEeeeEeCC-ceEEEeecccc
Q 048431 187 EGAKIIAAGD------SPNTDGIHVQQSRNVIIKSSSIKTGDDCISIGPG----TNNLWIERVTCGPG-HGISIGSLAKD 255 (396)
Q Consensus 187 ~n~~i~~~~~------~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~i~~~----~~ni~i~n~~~~~~-~gi~igs~g~~ 255 (396)
+|++|.+.+| +++.||++...|+||+|+||++..+++++++++. .+||+|+||++.+. +|++|++...+
T Consensus 394 ~n~~i~~gDD~Iaiksg~~~~g~~~~~s~nI~I~n~~~~~ghg~~~iGS~~~~~v~nI~v~n~~~~~t~~GirIKt~~g~ 473 (608)
T 2uvf_A 394 FNNFFDTGDDCINFAAGTGEKAQEQEPMKGAWLFNNYFRMGHGAIVTGSHTGAWIEDILAENNVMYLTDIGLRAKSTSTI 473 (608)
T ss_dssp ESCEEECSSCSEEEECCCSGGGGGSCCEEEEEEESCEECSSSCSEEEESCCTTCEEEEEEESCEEESCSEEEEEEEETTT
T ss_pred EeeEEecCCceEEecCCcCccccccccccCEEEEeEEEeCCCCeEEEcccCCCCEEEEEEEeEEEECCCceEEEeeecCC
Confidence 9999998665 2456677766799999999999999998888773 59999999999876 69999986433
Q ss_pred CCCCCEEEEEEEeeEEeCC-ccEEEEEeecCC-----------CCceEEcEEEEeeEeecCC---ccEEEEeecCCCCCC
Q 048431 256 LDEEGVQNVTVFKTVFTGT-TNGLRIKSWARP-----------SNGFVRGIRFIDALMQNVQ---HPIIIDQNYCPHNLN 320 (396)
Q Consensus 256 ~~~~~~~ni~i~n~~~~~~-~~gi~i~~~~~~-----------~~g~v~nI~~~ni~~~~~~---~~i~i~~~~~~~~~~ 320 (396)
.+.++||+|+|++|.+. ..++.|+..... ..+.+++|+|+||+++++. .++.|... +.
T Consensus 474 --gG~v~nI~~~ni~m~~v~~~~i~I~~~y~~~~~~~~~~~~~~~~~~~~V~i~nI~~~n~~gt~~~i~i~g~-~~---- 546 (608)
T 2uvf_A 474 --GGGARNVTFRNNAMRDLAKQVMVMTLDYADSNANIDYPPAKIPAQFYDFTLKNVTVDNSTGKNPSIEIKGD-TA---- 546 (608)
T ss_dssp --CCEEEEEEEEEEEEEEESSEEEEEEEECCCCSCCCSSCCCSSCCEEEEEEEEEEEEEEECSSSCSEEEECB-GG----
T ss_pred --CceEECcEEEeeEEEccccccEEEEeccCCCCcccccCCcCCCCccccEEEEeEEEEeeeceEEeEEEEEE-cC----
Confidence 35699999999999998 599999876531 2467999999999999875 36666632 21
Q ss_pred CCCCCcceEEEeEEEEeEEEeeCCCeeEEEeeCCCCceecEEEEeEEEEecCCcccceeeeceecccceecCCC
Q 048431 321 CPGQISGVKISDVIYQDIRGTSATPIAIKFDCSTKYPCKGIRLHNVHLRHLKQEAKSSCNNVIGEALGLVQPNS 394 (396)
Q Consensus 321 ~~~~~~~~~i~nI~~~ni~~~~~~~~~~~i~~~~~~~~~ni~~~ni~v~~~~~~~~~~c~~~~~~~~~~~~~~~ 394 (396)
...+++||+|+||+++... +..+. .|++++|+||++...++...+.|.++.+..+.-+.|.|
T Consensus 547 -----~~~p~~ni~~~nv~i~~~~--~~~i~-----~~~~~~~~nv~i~~~~~~~~~~~~~v~~~~~~~v~~~p 608 (608)
T 2uvf_A 547 -----NKAWHRLVHVNNVQLNNVT--PTAIS-----DLRDSEFNKVTFTELRGDTPWHFSEVKNVKVDGKPVAP 608 (608)
T ss_dssp -----GTBCEEEEEEEEEEEESCC--CCEEE-----SEESCEEEEEEEESCSSSCSCCEESCBSCCBTTCCC--
T ss_pred -----CCCccccEEEEeEEEEccC--ceeEE-----eccCceEEeEEEeCCCCCccEEEEeeeceEEcceEeCC
Confidence 3347999999999999765 44443 57899999999986654457999999998753355655
No 21
>3eqn_A Glucan 1,3-beta-glucosidase; tandem beta-helix domains, glycosidase, hydrolase; HET: NAG BMA; 1.70A {Phanerochaete chrysosporium} PDB: 3eqo_A*
Probab=99.88 E-value=1.4e-21 Score=199.37 Aligned_cols=264 Identities=16% Similarity=0.179 Sum_probs=182.8
Q ss_pred cccEEEeeccCccCCCCcccHHHHHHHHHHHhhcCCC---------cEEEecCceEEEe-ceeecccCCCCcEEEEEee-
Q 048431 27 TSTIYNVLRCGAKGNGITDSTQAFAKAWAAACASNES---------ATIYVPKGRYLLG-SVAFRSECKSPSITFLING- 95 (396)
Q Consensus 27 ~~~~~~v~d~Ga~~dg~~d~t~aiq~Ai~~a~~~~~g---------~~v~iP~G~Y~~~-~l~l~~~~~~~n~~l~~~G- 95 (396)
.+..++|+||||++||.+|||+|||+||+++ ++.++ ++||||+|+|++. +|.+++ ++.|.+++
T Consensus 46 y~v~~nV~dfGA~GDG~tDDT~Aiq~Ai~~a-~~~Gggc~~st~~~~~V~~P~GtYlvs~tI~l~~-----~t~L~G~~~ 119 (758)
T 3eqn_A 46 YPVFRNVKNYGAKGDGNTDDTAAIQAAINAG-GRCGQGCDSTTTQPALVYFPPGTYKVSSPLVVLY-----QTQLIGDAK 119 (758)
T ss_dssp CCSEEEGGGGTCCCEEEEECHHHHHHHHHTT-SCSCTTCCCCSSSCEEEEECSSEEEESSCEECCT-----TEEEEECSS
T ss_pred CeEEEEHHHcCcCCCCCchhHHHHHHHHHHh-hhcccccccccccceEEEECCceEEEcccEEccC-----CeEEEecCC
Confidence 3557899999999999999999999999764 43333 5999999999875 799986 99999985
Q ss_pred ---EEEeeCCccccCCCcceEEEeceeeEEEEceEEeCCCCCcccccccCCCCCCCCceEEEEEeecCeEEEEEEEecCC
Q 048431 96 ---TLVAPTDYRVLGQANNWLSFEGVSHVSIIGGALDAKGTSLWACKTAAGSNCPNGATTLSITKSNNIRINGLLSLNSQ 172 (396)
Q Consensus 96 ---~l~~~~~~~~~~~~~~~i~~~~~~nv~I~Gg~idg~g~~~w~~~~~~~~~~~~~p~~i~~~~~~nv~i~~~~i~~~~ 172 (396)
+|++.+. |... .+ |.+...+++|..||.... ..+...+|+.|+ ++..++.
T Consensus 120 ~~pvIka~~~---F~G~-~l----------i~~d~y~~~G~~w~~~~~------------~F~r~irNlviD-~t~~~~~ 172 (758)
T 3eqn_A 120 NLPTLLAAPN---FSGI-AL----------IDADPYLAGGAQYYVNQN------------NFFRSVRNFVID-LRQVSGS 172 (758)
T ss_dssp SCCEEEECTT---CCSS-CS----------EESSCBCGGGCBSSCGGG------------CCCEEEEEEEEE-CTTCSSC
T ss_pred CCCeEecCCC---CCCc-ce----------eeccccCCCCcccccccc------------ceeeeecceEEe-ccccCCC
Confidence 6665433 2111 11 233344566677774432 234556777777 5555556
Q ss_pred cceEEEeeeecEEEEeEEEEcCCCCC-CCCCeeeeceeeEEEEecEEecCCceEEeCCCCccEEEEeeeEeCCc-eEEEe
Q 048431 173 MYHIVINRCQDVLVEGAKIIAAGDSP-NTDGIHVQQSRNVIIKSSSIKTGDDCISIGPGTNNLWIERVTCGPGH-GISIG 250 (396)
Q Consensus 173 ~~~i~~~~~~nv~i~n~~i~~~~~~~-~~DGi~~~~s~nv~I~n~~i~~~dD~i~i~~~~~ni~i~n~~~~~~~-gi~ig 250 (396)
..++++..|++..|+||.|..+.... .++||++...+...|+|++|..|+-++.++. +-.+++|.+|.++. +|.+-
T Consensus 173 ~~gIhw~vaQatsL~Nv~i~m~~~sg~~~~GI~~e~GSgg~i~Dl~f~GG~~G~~~gn--QQfT~rnltF~~~~taI~~~ 250 (758)
T 3eqn_A 173 ATGIHWQVSQATSLINIVFQMSTAAGNQHQGIFMENGSGGFLGDLVFNGGNIGATFGN--QQFTVRNLTFNNANTAINAI 250 (758)
T ss_dssp EEEEECCCCSSEEEEEEEEECCCSTTCCEEEEEECSCCCCEEEEEEEESCSEEEEEEC--SCCEEEEEEEESCSEEEEEE
T ss_pred ceEEEEEecCceEEEEEEEEecCCCCCcceeEEecCCCceEEEeeEEeCCceEEEcCC--cceEEeccEEeChHHHHhhh
Confidence 78999999999999999999976543 4899999988899999999999999988855 45666666666543 55553
Q ss_pred eccccCCCCCEEEEEEEeeEEeCCccEEEEEeecCC--CCceEEcEEEEeeEeecCCccEEEEeecCCCCCCCCCCCcce
Q 048431 251 SLAKDLDEEGVQNVTVFKTVFTGTTNGLRIKSWARP--SNGFVRGIRFIDALMQNVQHPIIIDQNYCPHNLNCPGQISGV 328 (396)
Q Consensus 251 s~g~~~~~~~~~ni~i~n~~~~~~~~gi~i~~~~~~--~~g~v~nI~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~ 328 (396)
... ..++.+++|.++..||.+...... ....+--+++.|.+++++..++.. .+.... ......
T Consensus 251 w~w---------gwt~~~~~i~nc~vGi~~~~g~~~~~~~q~vGsv~l~Ds~~~n~~~~i~t--~~~~~~----~~~~sl 315 (758)
T 3eqn_A 251 WNW---------GWTFQRITINNCQVGFDLTQGGTSNTGAQGVGAEAIIDAVVTNTQTFVRW--SGASSG----HLQGSL 315 (758)
T ss_dssp EBS---------CEEEEEEEEESCSEEEEECCCCSSTTSCCCBCEEEEEEEEEESCSEEEEE--SSCCCS----SCSSEE
T ss_pred cCc---------eEEEEEeEEECCCccEEEcCCCCCcccCcceeeEEEEEeeEEcccceEEe--ccCCCC----CCcceE
Confidence 211 245556666666668877652110 123567788999999988755443 222211 112356
Q ss_pred EEEeEEEEeEEE
Q 048431 329 KISDVIYQDIRG 340 (396)
Q Consensus 329 ~i~nI~~~ni~~ 340 (396)
.++||.++|+..
T Consensus 316 vleNv~~~nv~~ 327 (758)
T 3eqn_A 316 VLNNIQLTNVPV 327 (758)
T ss_dssp EEEEEEEEEEEE
T ss_pred EEEeEEeeCCCe
Confidence 788888888754
No 22
>1ia5_A Polygalacturonase; glycosylhydrolase, hydrolase; HET: MAN NAG; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3 PDB: 1ib4_A*
Probab=99.87 E-value=5.2e-20 Score=176.90 Aligned_cols=203 Identities=22% Similarity=0.310 Sum_probs=163.6
Q ss_pred EEEEEeecCeEEEEE---EEecC--Ccc-------------eEEEeeeecEEEEeEEEEcCCCCCCCCCeeeeceeeEEE
Q 048431 152 TLSITKSNNIRINGL---LSLNS--QMY-------------HIVINRCQDVLVEGAKIIAAGDSPNTDGIHVQQSRNVII 213 (396)
Q Consensus 152 ~i~~~~~~nv~i~~~---~i~~~--~~~-------------~i~~~~~~nv~i~n~~i~~~~~~~~~DGi~~~~s~nv~I 213 (396)
++.+.. +|++|.|. +|... ..| .+.+..|+|++|+++++.++. .+++++..|++|+|
T Consensus 66 li~~~~-~nv~I~G~~gG~IdG~G~~~w~~~~~~~~~~rp~~i~~~~~~nv~i~~i~i~nsp----~~~i~i~~~~nv~i 140 (339)
T 1ia5_A 66 LISVSG-SDLTITGASGHSINGDGSRWWDGEGGNGGKTKPKFFAAHSLTNSVISGLKIVNSP----VQVFSVAGSDYLTL 140 (339)
T ss_dssp SEEEEE-ESCEEEECTTCEEECCGGGTCSSCTTTSSSCCCCCEEEEEEEEEEEESCEEECCS----SCCEEEESCEEEEE
T ss_pred EEEEEc-CcEEEEcCCCeEEeCCCCccccccccCCCCCCCeEEEEeecCcEEEEEEEEEcCC----cceEEEecccCeEE
Confidence 566654 99999997 66533 223 489999999999999999853 47899999999999
Q ss_pred EecEEecC---------CceEEeCCCCccEEEEeeeEeCCc-eEEEeeccccCCCCCEEEEEEEeeEEeCCccEEEEEee
Q 048431 214 KSSSIKTG---------DDCISIGPGTNNLWIERVTCGPGH-GISIGSLAKDLDEEGVQNVTVFKTVFTGTTNGLRIKSW 283 (396)
Q Consensus 214 ~n~~i~~~---------dD~i~i~~~~~ni~i~n~~~~~~~-gi~igs~g~~~~~~~~~ni~i~n~~~~~~~~gi~i~~~ 283 (396)
+++.|.+. .|+|.+.+ ++||+|+||++..++ ++++++. +||+|+||++.+. +|+.|++.
T Consensus 141 ~~~~I~~~~~d~~~~~ntDGid~~~-s~nV~I~n~~i~~gDDcIaiksg---------~nI~i~n~~~~~g-hGisiGS~ 209 (339)
T 1ia5_A 141 KDITIDNSDGDDNGGHNTDAFDIGT-STYVTISGATVYNQDDCVAVNSG---------ENIYFSGGYCSGG-HGLSIGSV 209 (339)
T ss_dssp ESCEEECGGGTTTTCCSCCSEEEES-CEEEEEESCEEECSSCSEEESSE---------EEEEEESCEEESS-SCEEEEEE
T ss_pred eeEEEECCccccccCCCCCcEEecC-CceEEEEeeEEEcCCCeEEEeCC---------eEEEEEeEEEECC-ceEEECcC
Confidence 99999862 57899888 999999999998775 6999762 8999999999986 68999986
Q ss_pred cCCCCceEEcEEEEeeEeecCCccEEEEeecCCCCCCCCCCCcceEEEeEEEEeEEEeeCCCeeEEEee-------CC--
Q 048431 284 ARPSNGFVRGIRFIDALMQNVQHPIIIDQNYCPHNLNCPGQISGVKISDVIYQDIRGTSATPIAIKFDC-------ST-- 354 (396)
Q Consensus 284 ~~~~~g~v~nI~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~nI~~~ni~~~~~~~~~~~i~~-------~~-- 354 (396)
.....+.++||+|+|+++.+..+++.|+.... ..+.++||+|+||++......++.++. .|
T Consensus 210 g~~~~~~v~nV~v~n~~~~~t~~girIKt~~g----------~~G~v~nI~~~ni~~~~v~~~~i~i~~~y~~~~~~p~~ 279 (339)
T 1ia5_A 210 GGRSDNTVKNVTFVDSTIINSDNGVRIKTNID----------TTGSVSDVTYKDITLTSIAKYGIVVQQNYGDTSSTPTT 279 (339)
T ss_dssp CSSSCCEEEEEEEEEEEEESCSEEEEEEEETT----------CCCEEEEEEEEEEEEEEESSEEEEEEEEETCTTSCCCS
T ss_pred CcccCCCEEEEEEEeeEEECCCcEEEEEEeCC----------CCcEEEeeEEEEEEEECcccccEEEEccCCCCCCCCcC
Confidence 43355889999999999999999999997532 235899999999999976544766653 12
Q ss_pred CCceecEEEEeEEEEecC--Ccccceee
Q 048431 355 KYPCKGIRLHNVHLRHLK--QEAKSSCN 380 (396)
Q Consensus 355 ~~~~~ni~~~ni~v~~~~--~~~~~~c~ 380 (396)
..+++||+|+||+.+... .+..+.|+
T Consensus 280 ~~~i~ni~~~ni~gt~~~~~~~v~i~c~ 307 (339)
T 1ia5_A 280 GVPITDFVLDNVHGSVVSSGTNILISCG 307 (339)
T ss_dssp SSCEEEEEEEEEEEEECTTSEEEEEECC
T ss_pred CceEEEEEEEeEEEEeCCCCEEEEEEeC
Confidence 357999999999998875 34455663
No 23
>1czf_A Polygalacturonase II; beta helix, hydrolase; HET: NAG; 1.68A {Aspergillus niger} SCOP: b.80.1.3
Probab=99.87 E-value=2.5e-20 Score=180.39 Aligned_cols=202 Identities=15% Similarity=0.211 Sum_probs=160.8
Q ss_pred EEEEEeecCeEEEE---EEEecC--Ccc------------eEEEeeeecEEEEeEEEEcCCCCCCCCCeeeeceeeEEEE
Q 048431 152 TLSITKSNNIRING---LLSLNS--QMY------------HIVINRCQDVLVEGAKIIAAGDSPNTDGIHVQQSRNVIIK 214 (396)
Q Consensus 152 ~i~~~~~~nv~i~~---~~i~~~--~~~------------~i~~~~~~nv~i~n~~i~~~~~~~~~DGi~~~~s~nv~I~ 214 (396)
++.+ +.+|++|.| -+|... ..| .+.+..|+|++|+++++.++. ..++++. |+||+|+
T Consensus 89 ~i~~-~~~nv~I~G~~~g~IdG~G~~~w~~~~~~~~~rP~~i~~~~~~nv~i~~iti~nsp----~~~i~i~-~~nv~i~ 162 (362)
T 1czf_A 89 LISM-SGEHITVTGASGHLINCDGARWWDGKGTSGKKKPKFFYAHGLDSSSITGLNIKNTP----LMAFSVQ-ANDITFT 162 (362)
T ss_dssp SEEE-EEESCEEEECTTCEEECCGGGTCCSCTTSSSCCCCCEEEEEEETEEEESCEEECCS----SCCEEEE-CSSEEEE
T ss_pred EEEE-eCccEEEEcCCCcEEECCCchhhcccCCCCCCCCeEEEEeecccEEEEEEEEecCC----ccEEEEe-eCCEEEE
Confidence 5666 559999999 455432 223 489999999999999999853 2469999 9999999
Q ss_pred ecEEec---------CCceEEeCCCCccEEEEeeeEeCCc-eEEEeeccccCCCCCEEEEEEEeeEEeCCccEEEEEeec
Q 048431 215 SSSIKT---------GDDCISIGPGTNNLWIERVTCGPGH-GISIGSLAKDLDEEGVQNVTVFKTVFTGTTNGLRIKSWA 284 (396)
Q Consensus 215 n~~i~~---------~dD~i~i~~~~~ni~i~n~~~~~~~-gi~igs~g~~~~~~~~~ni~i~n~~~~~~~~gi~i~~~~ 284 (396)
|++|.+ ..|++.+.+ ++||+|+||++..++ +++|++. +||+|+||++.+. +|+.|++..
T Consensus 163 ~~~I~~~~~d~~~~~NtDGidi~~-s~nV~I~n~~i~~gDDcIaiksg---------~nI~i~n~~~~~g-hGisiGS~G 231 (362)
T 1czf_A 163 DVTINNADGDTQGGHNTDAFDVGN-SVGVNIIKPWVHNQDDCLAVNSG---------ENIWFTGGTCIGG-HGLSIGSVG 231 (362)
T ss_dssp SCEEECGGGGTTTCCSCCSEEECS-CEEEEEESCEEECSSCSEEESSE---------EEEEEESCEEESS-CCEEEEEEC
T ss_pred EEEEECCccccccCCCCCceeecC-cceEEEEeeEEecCCCEEEEeCC---------eEEEEEEEEEeCC-ceeEEeecc
Confidence 999987 257888887 999999999999886 5999762 8999999999986 689999873
Q ss_pred CCCCceEEcEEEEeeEeecCCccEEEEeecCCCCCCCCCCCcceEEEeEEEEeEEEeeCCCeeEEEee---------CC-
Q 048431 285 RPSNGFVRGIRFIDALMQNVQHPIIIDQNYCPHNLNCPGQISGVKISDVIYQDIRGTSATPIAIKFDC---------ST- 354 (396)
Q Consensus 285 ~~~~g~v~nI~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~nI~~~ni~~~~~~~~~~~i~~---------~~- 354 (396)
....+.++||+|+|+++.+..+++.|+.... ..+.++||+|+||++......++.++. .|
T Consensus 232 ~~~~~~v~nV~v~n~~~~~t~~GirIKt~~g----------~~G~v~nI~~~ni~~~~v~~~~i~I~~~Y~~~~~~~~p~ 301 (362)
T 1czf_A 232 DRSNNVVKNVTIEHSTVSNSENAVRIKTISG----------ATGSVSEITYSNIVMSGISDYGVVIQQDYEDGKPTGKPT 301 (362)
T ss_dssp SSSCCEEEEEEEEEEEEEEEEEEEEEEEETT----------CCEEEEEEEEEEEEEEEEEEEEEEEEEEEETTEECSCCC
T ss_pred ccCCCCEEEEEEEeeEEECCceEEEEEEeCC----------CCceEeeEEEEeEEEECcccccEEEEEecCCCCCCCCCC
Confidence 3256899999999999999999999997532 245899999999998876434666642 12
Q ss_pred -CCceecEEEEeEEEEecC--Ccccceee
Q 048431 355 -KYPCKGIRLHNVHLRHLK--QEAKSSCN 380 (396)
Q Consensus 355 -~~~~~ni~~~ni~v~~~~--~~~~~~c~ 380 (396)
..+++||+|+||+.+..+ .+..+.|+
T Consensus 302 ~~~~i~nI~~~ni~gt~~~~~~~i~i~c~ 330 (362)
T 1czf_A 302 NGVTIQDVKLESVTGSVDSGATEIYLLCG 330 (362)
T ss_dssp SSEEEEEEEEEEEEEEECTTSEEEEEECC
T ss_pred CCceEEEEEEEEEEEEecCCceEEEEEeC
Confidence 246999999999998775 23445554
No 24
>2iq7_A Endopolygalacturonase; parallel beta helix, hydrolase; HET: NAG MAN PG4; 1.94A {Colletotrichum lupini}
Probab=99.87 E-value=1e-19 Score=174.90 Aligned_cols=202 Identities=16% Similarity=0.250 Sum_probs=162.8
Q ss_pred EEEEEeecCeEEEEE---EEecC--Ccc-------------eEEEeeeecEEEEeEEEEcCCCCCCCCCeeeeceeeEEE
Q 048431 152 TLSITKSNNIRINGL---LSLNS--QMY-------------HIVINRCQDVLVEGAKIIAAGDSPNTDGIHVQQSRNVII 213 (396)
Q Consensus 152 ~i~~~~~~nv~i~~~---~i~~~--~~~-------------~i~~~~~~nv~i~n~~i~~~~~~~~~DGi~~~~s~nv~I 213 (396)
++.+.. +|++|.|. +|... ..| .+.+..|+|++|+++++.++. ..++++..|++|+|
T Consensus 62 ~i~~~~-~nv~I~G~~gG~IdG~G~~~w~~~~~~~~~~rp~~i~~~~~~nv~i~giti~nsp----~~~i~i~~~~nv~i 136 (339)
T 2iq7_A 62 LISFSG-TNININGASGHSIDCQGSRWWDSKGSNGGKTKPKFFYAHSLKSSNIKGLNVLNTP----VQAFSINSATTLGV 136 (339)
T ss_dssp SEEEEE-ESCEEEECTTCEEECCGGGTCCSCGGGSSSCCCCCEEEEEEEEEEEECCEEECCS----SCCEEEESCEEEEE
T ss_pred EEEEEc-ccEEEEcCCCCEEECCcccccccccccCCCCCCeEEEEeeeCcEEEEEEEEEeCC----cceEEEeccCCEEE
Confidence 566654 99999997 66433 223 488999999999999999853 47899999999999
Q ss_pred EecEEecC---------CceEEeCCCCccEEEEeeeEeCCc-eEEEeeccccCCCCCEEEEEEEeeEEeCCccEEEEEee
Q 048431 214 KSSSIKTG---------DDCISIGPGTNNLWIERVTCGPGH-GISIGSLAKDLDEEGVQNVTVFKTVFTGTTNGLRIKSW 283 (396)
Q Consensus 214 ~n~~i~~~---------dD~i~i~~~~~ni~i~n~~~~~~~-gi~igs~g~~~~~~~~~ni~i~n~~~~~~~~gi~i~~~ 283 (396)
+|+.|.+. .|+|.+.+ ++||+|+||++..++ ++++++. +||+|+||++.+. +|+.|++.
T Consensus 137 ~~~~I~~~~~d~~~~~ntDGid~~~-s~nV~I~n~~i~~gDDciaiksg---------~nI~i~n~~~~~g-hGisiGSl 205 (339)
T 2iq7_A 137 YDVIIDNSAGDSAGGHNTDAFDVGS-STGVYISGANVKNQDDCLAINSG---------TNITFTGGTCSGG-HGLSIGSV 205 (339)
T ss_dssp ESCEEECGGGGGTTCCSCCSEEEES-CEEEEEESCEEECSSCSEEESSE---------EEEEEESCEEESS-CCEEEEEE
T ss_pred EEEEEECCccccccCCCCCcEEEcC-cceEEEEecEEecCCCEEEEcCC---------ccEEEEeEEEECC-ceEEECcC
Confidence 99999863 57898888 999999999998775 6999762 8999999999986 58999986
Q ss_pred cCCCCceEEcEEEEeeEeecCCccEEEEeecCCCCCCCCCCCcceEEEeEEEEeEEEeeCCCeeEEEee---------CC
Q 048431 284 ARPSNGFVRGIRFIDALMQNVQHPIIIDQNYCPHNLNCPGQISGVKISDVIYQDIRGTSATPIAIKFDC---------ST 354 (396)
Q Consensus 284 ~~~~~g~v~nI~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~nI~~~ni~~~~~~~~~~~i~~---------~~ 354 (396)
.....+.++||+|+|+++.+..+++.|+.... ..+.++||+|+||++......++.++. .|
T Consensus 206 g~~~~~~v~nV~v~n~~~~~~~~girIkt~~g----------~~G~v~nI~~~ni~~~~v~~~~i~i~~~y~~~~~~~~p 275 (339)
T 2iq7_A 206 GGRSDNTVKTVTISNSKIVNSDNGVRIKTVSG----------ATGSVSGVTYSGITLSNIAKYGIVIEQDYENGSPTGTP 275 (339)
T ss_dssp SSSSCCEEEEEEEEEEEEESCSEEEEEEEETT----------CCCEEEEEEEEEEEEEEESSEEEEEEEEEETTEECSCC
T ss_pred CcccCCCEEEEEEEeeEEECCCcEEEEEEeCC----------CCeEEEEEEEEeEEccCcccccEEEEeecCCCCCCCCC
Confidence 43356899999999999999999999997532 235899999999999976544666642 12
Q ss_pred --CCceecEEEEeEEEEecC--Cccccee
Q 048431 355 --KYPCKGIRLHNVHLRHLK--QEAKSSC 379 (396)
Q Consensus 355 --~~~~~ni~~~ni~v~~~~--~~~~~~c 379 (396)
..+++||+|+||+.+..+ .+..+.|
T Consensus 276 ~~~~~i~ni~~~ni~gt~~~~~~~~~i~c 304 (339)
T 2iq7_A 276 TNGVPITGLTLSKITGSVASSGTNVYILC 304 (339)
T ss_dssp CSSSCEEEEEEEEEEEEECTTSEEEEEEC
T ss_pred CCCceEEEEEEEeEEEEeCCCCEEEEEEe
Confidence 247999999999999875 2444555
No 25
>1nhc_A Polygalacturonase I; beta-helix, hydrolase; HET: MAN NAG BMA; 1.70A {Aspergillus niger} SCOP: b.80.1.3
Probab=99.86 E-value=1.8e-19 Score=173.09 Aligned_cols=202 Identities=17% Similarity=0.269 Sum_probs=161.5
Q ss_pred EEEEEeecCeEEEEE---EEecC--Ccc-------------eEEEeeeecEEEEeEEEEcCCCCCCCCCeeeeceeeEEE
Q 048431 152 TLSITKSNNIRINGL---LSLNS--QMY-------------HIVINRCQDVLVEGAKIIAAGDSPNTDGIHVQQSRNVII 213 (396)
Q Consensus 152 ~i~~~~~~nv~i~~~---~i~~~--~~~-------------~i~~~~~~nv~i~n~~i~~~~~~~~~DGi~~~~s~nv~I 213 (396)
++.+ ..+|++|.|. +|... ..| .+.+..|+|++|+++++.++. ..++++. |++|+|
T Consensus 62 li~~-~~~nv~I~G~~gG~IdG~G~~~w~~~~~~~~~~rp~~i~~~~~~nv~i~~i~i~nsp----~~~i~i~-~~nv~i 135 (336)
T 1nhc_A 62 LIRF-GGKDLTVTMADGAVIDGDGSRWWDSKGTNGGKTKPKFMYIHDVEDSTFKGINIKNTP----VQAISVQ-ATNVHL 135 (336)
T ss_dssp SEEC-CEESCEEEECTTCEEECCGGGTCCSCTTTSSSCCCCCEEEEEEEEEEEESCEEECCS----SCCEEEE-EEEEEE
T ss_pred EEEE-ecCCEEEEcCCCeEEECCccccccccCcCCCCCCceEEEEeeeCcEEEEEEEEEeCC----ccEEEEE-eCCEEE
Confidence 4555 4599999996 66432 223 488999999999999999853 3479999 999999
Q ss_pred EecEEecC---------CceEEeCCCCccEEEEeeeEeCCc-eEEEeeccccCCCCCEEEEEEEeeEEeCCccEEEEEee
Q 048431 214 KSSSIKTG---------DDCISIGPGTNNLWIERVTCGPGH-GISIGSLAKDLDEEGVQNVTVFKTVFTGTTNGLRIKSW 283 (396)
Q Consensus 214 ~n~~i~~~---------dD~i~i~~~~~ni~i~n~~~~~~~-gi~igs~g~~~~~~~~~ni~i~n~~~~~~~~gi~i~~~ 283 (396)
+|+.|.+. .|+|.+.+ ++||+|+||++..++ +++|++. +||+|+||++.+. +|+.|++.
T Consensus 136 ~~~~I~~~~~d~~~~~ntDGidi~~-s~nV~I~n~~i~~gDDciaiksg---------~nI~i~n~~~~~g-hGisiGS~ 204 (336)
T 1nhc_A 136 NDFTIDNSDGDDNGGHNTDGFDISE-STGVYISGATVKNQDDCIAINSG---------ESISFTGGTCSGG-HGLSIGSV 204 (336)
T ss_dssp ESCEEECTTHHHHTCCSCCSEEECS-CEEEEEESCEEESSSEEEEESSE---------EEEEEESCEEESS-SEEEEEEE
T ss_pred EEEEEECCCcccccCCCCCcEEecC-CCeEEEEeCEEEcCCCEEEEeCC---------eEEEEEeEEEECC-cCceEccC
Confidence 99999873 58899988 999999999998776 5999762 8999999999986 68999986
Q ss_pred cCCCCceEEcEEEEeeEeecCCccEEEEeecCCCCCCCCCCCcceEEEeEEEEeEEEeeCCCeeEEEee---------CC
Q 048431 284 ARPSNGFVRGIRFIDALMQNVQHPIIIDQNYCPHNLNCPGQISGVKISDVIYQDIRGTSATPIAIKFDC---------ST 354 (396)
Q Consensus 284 ~~~~~g~v~nI~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~nI~~~ni~~~~~~~~~~~i~~---------~~ 354 (396)
.....+.++||+|+|+++.+..+++.|+.... ..+.++||+|+||++......++.++. .|
T Consensus 205 g~~~~~~v~nV~v~n~~~~~t~~girIkt~~g----------~~G~v~nI~~~ni~~~~v~~~~i~i~~~y~~~~~~~~p 274 (336)
T 1nhc_A 205 GGRDDNTVKNVTISDSTVSNSANGVRIKTIYK----------ETGDVSEITYSNIQLSGITDYGIVIEQDYENGSPTGTP 274 (336)
T ss_dssp SSSSCCEEEEEEEEEEEEESCSEEEEEEEETT----------CCCEEEEEEEEEEEEEEESSEEEEEEEEEETTEECSCC
T ss_pred ccccCCCEEEEEEEeeEEECCCcEEEEEEECC----------CCCEEeeeEEeeEEeeccccccEEEEeecCCCCCCCCC
Confidence 43345799999999999999999999997532 234899999999999987654666642 12
Q ss_pred --CCceecEEEEeEEEEecC--Ccccceee
Q 048431 355 --KYPCKGIRLHNVHLRHLK--QEAKSSCN 380 (396)
Q Consensus 355 --~~~~~ni~~~ni~v~~~~--~~~~~~c~ 380 (396)
..+++||+|+||+.+... .+..+.|+
T Consensus 275 ~~~~~i~~i~~~ni~gt~~~~~~~v~i~c~ 304 (336)
T 1nhc_A 275 STGIPITDVTVDGVTGTLEDDATQVYILCG 304 (336)
T ss_dssp CSSSCEEEEEEEEEEEEECTTCEEEEEECC
T ss_pred CCCceEEEEEEEeEEEEeCCCCEEEEEEcC
Confidence 247999999999999876 23455663
No 26
>1bhe_A PEHA, polygalacturonase; family 28 glycosyl hydrolase, hydrolyses polygalacturonic acid, glycosidase; 1.90A {Pectobacterium carotovorum subsp} SCOP: b.80.1.3
Probab=99.85 E-value=2.3e-19 Score=175.12 Aligned_cols=218 Identities=14% Similarity=0.153 Sum_probs=169.8
Q ss_pred cEEEEEeeEEEeeCCc-------cccCC------------CcceEEEeceeeEEEEceEEeCCCCCcccccccCCCCCCC
Q 048431 88 SITFLINGTLVAPTDY-------RVLGQ------------ANNWLSFEGVSHVSIIGGALDAKGTSLWACKTAAGSNCPN 148 (396)
Q Consensus 88 n~~l~~~G~l~~~~~~-------~~~~~------------~~~~i~~~~~~nv~I~Gg~idg~g~~~w~~~~~~~~~~~~ 148 (396)
|++|.+.|+|.+.... ..|.. ...++.+.+++|++|+|-++....
T Consensus 110 ni~I~G~G~IdG~G~~~~~~~~~~ww~~~~~~~~~~~~~~rp~~i~~~~~~nv~I~~iti~nsp---------------- 173 (376)
T 1bhe_A 110 NSGIYGPGTIDGQGGVKLQDKKVSWWELAADAKVKKLKQNTPRLIQINKSKNFTLYNVSLINSP---------------- 173 (376)
T ss_dssp SCEEECSSEEECCTTSCCSSSSSCTTHHHHHHHHHTCEECCCCSEEEESCEEEEEEEEEEECCS----------------
T ss_pred eEEEEeCEEEECCCCcccCCCccccccccccccccCccCCCCeEEEEEcceEEEEEeEEEECCC----------------
Confidence 8999998999876531 22320 134688999999999994443221
Q ss_pred CceEEEEEeecCeEEEEEEEecC----CcceEEEeeeecEEEEeEEEEcCCCCCCCCCeeee------ceeeEEEEecEE
Q 048431 149 GATTLSITKSNNIRINGLLSLNS----QMYHIVINRCQDVLVEGAKIIAAGDSPNTDGIHVQ------QSRNVIIKSSSI 218 (396)
Q Consensus 149 ~p~~i~~~~~~nv~i~~~~i~~~----~~~~i~~~~~~nv~i~n~~i~~~~~~~~~DGi~~~------~s~nv~I~n~~i 218 (396)
.+.+.+..|+|++|++++|.++ ..+++++.+|+||+|+|++|.+. .|+|.+. .|+||+|+||.+
T Consensus 174 -~~~i~~~~~~~v~i~~v~I~~~~~~~NtDGid~~~s~nV~I~n~~i~~g-----DDcIaiks~~~~~~s~nI~I~n~~~ 247 (376)
T 1bhe_A 174 -NFHVVFSDGDGFTAWKTTIKTPSTARNTDGIDPMSSKNITIAYSNIATG-----DDNVAIKAYKGRAETRNISILHNDF 247 (376)
T ss_dssp -SCSEEEESCEEEEEEEEEEECCTTCSSCCSEEEESCEEEEEESCEEECS-----SCSEEEEECTTSCCEEEEEEEEEEE
T ss_pred -cEEEEEeCCCcEEEEeEEEECCCCCCCCceEeecCCceEEEEeCEEecC-----CCeEEEcccCCCCCceEEEEEeeEE
Confidence 1357889999999999999875 35789999999999999999974 3788887 599999999999
Q ss_pred ecCCceEEeCC---CCccEEEEeeeEeCC-ceEEEeeccccCCCCCEEEEEEEeeEEeCCccEEEEEeecC----CCCce
Q 048431 219 KTGDDCISIGP---GTNNLWIERVTCGPG-HGISIGSLAKDLDEEGVQNVTVFKTVFTGTTNGLRIKSWAR----PSNGF 290 (396)
Q Consensus 219 ~~~dD~i~i~~---~~~ni~i~n~~~~~~-~gi~igs~g~~~~~~~~~ni~i~n~~~~~~~~gi~i~~~~~----~~~g~ 290 (396)
..+. ++++++ +.+||+|+||++.+. .|+.|++... ..+.++||+|+|++|.+...++.|..... ...+.
T Consensus 248 ~~gh-GisiGSe~~~v~nV~v~n~~~~~t~~GirIKt~~g--~~G~v~ni~f~ni~~~~v~~~i~i~~~y~~~~~~~~~~ 324 (376)
T 1bhe_A 248 GTGH-GMSIGSETMGVYNVTVDDLKMNGTTNGLRIKSDKS--AAGVVNGVRYSNVVMKNVAKPIVIDTVYEKKEGSNVPD 324 (376)
T ss_dssp CSSS-CEEEEEEESSEEEEEEEEEEEESCSEEEEEECCTT--TCCEEEEEEEEEEEEESCSEEEEEETTSSCCCCCCCCE
T ss_pred Eccc-cEEeccCCccEeeEEEEeeEEeCCCcEEEEEEecC--CCceEeeEEEEeEEEeCCCceEEEEeeccCCCCCcCcE
Confidence 9764 688865 579999999999876 5899998532 24669999999999999999999986442 12467
Q ss_pred EEcEEEEeeEeecCCccEEEEeecCCCCCCCCCCCcceEEEeEEEEeEEEeeC
Q 048431 291 VRGIRFIDALMQNVQHPIIIDQNYCPHNLNCPGQISGVKISDVIYQDIRGTSA 343 (396)
Q Consensus 291 v~nI~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~nI~~~ni~~~~~ 343 (396)
++||+|+||+.++.. ++.+.. . +..++++|+|+||+++..
T Consensus 325 i~ni~~~ni~gt~~~-~~~l~g---~---------~~~~~~~I~l~nv~l~~~ 364 (376)
T 1bhe_A 325 WSDITFKDVTSETKG-VVVLNG---E---------NAKKPIEVTMKNVKLTSD 364 (376)
T ss_dssp EEEEEEEEEEECSCC-EEEEEC---T---------TCSSCEEEEEEEEECCTT
T ss_pred EEEEEEEEEEEEecc-eEEEEe---C---------CCCCeeeEEEEeEEEecC
Confidence 999999999998754 555542 1 122568999999998755
No 27
>1rmg_A Rgase A, rhamnogalacturonase A; hydrolase, inverting, parallel beta-helix, glycosidase; HET: NAG BMA MAN GLC; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3
Probab=99.85 E-value=2.3e-18 Score=170.07 Aligned_cols=169 Identities=14% Similarity=0.183 Sum_probs=143.3
Q ss_pred eEEEeeeecEEEEeEEEEcCCCCCCCCCeeeeceeeEEEEecEEec----CCceEEeCCCCccEEEEeeeEeCCc-eEEE
Q 048431 175 HIVINRCQDVLVEGAKIIAAGDSPNTDGIHVQQSRNVIIKSSSIKT----GDDCISIGPGTNNLWIERVTCGPGH-GISI 249 (396)
Q Consensus 175 ~i~~~~~~nv~i~n~~i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~----~dD~i~i~~~~~ni~i~n~~~~~~~-gi~i 249 (396)
.+++..|+|++|+|+++.++. ..+|++..|+||+|+|+.|.+ +.|+|.+.+ +||+|+||++..++ +|+|
T Consensus 129 ~i~~~~~~nv~I~~iti~nsp----~~~i~i~~~~nv~I~n~~I~~~d~~ntDGidi~~--~nV~I~n~~i~~gDD~Iai 202 (422)
T 1rmg_A 129 ILRLTDVTHFSVHDIILVDAP----AFHFTMDTCSDGEVYNMAIRGGNEGGLDGIDVWG--SNIWVHDVEVTNKDECVTV 202 (422)
T ss_dssp EEEEEEEEEEEEEEEEEECCS----SCSEEEEEEEEEEEEEEEEECCSSTTCCSEEEEE--EEEEEEEEEEESSSEEEEE
T ss_pred EEEEcccceEEEECeEEECCC----ceEEEEeCcCCEEEEeEEEECCCCCCCccEeecC--CeEEEEeeEEeCCCCeEEe
Confidence 688999999999999999853 368999999999999999997 468999987 89999999999876 5999
Q ss_pred eeccccCCCCCEEEEEEEeeEEeCCccEEEEEeecCCCCceEEcEEEEeeEeecCCccEEEEeecCCCCCCCCCCCcceE
Q 048431 250 GSLAKDLDEEGVQNVTVFKTVFTGTTNGLRIKSWARPSNGFVRGIRFIDALMQNVQHPIIIDQNYCPHNLNCPGQISGVK 329 (396)
Q Consensus 250 gs~g~~~~~~~~~ni~i~n~~~~~~~~gi~i~~~~~~~~g~v~nI~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~ 329 (396)
++ +.+||+|+||++... +|++|++. + ..+.++||+|+|+++.+..+++.|+.. . ..+.
T Consensus 203 ~s--------~~~nI~I~n~~~~~~-~GisIGS~-g-~~~~v~nV~v~n~~~~~~~~Gi~Ikt~-~----------g~G~ 260 (422)
T 1rmg_A 203 KS--------PANNILVESIYCNWS-GGCAMGSL-G-ADTDVTDIVYRNVYTWSSNQMYMIKSN-G----------GSGT 260 (422)
T ss_dssp EE--------EEEEEEEEEEEEESS-SEEEEEEE-C-TTEEEEEEEEEEEEEESSSCSEEEEEB-B----------CCEE
T ss_pred CC--------CCcCEEEEeEEEcCC-cceeeccc-C-CCCcEEEEEEEeEEEeccceEEEEEec-C----------CCcE
Confidence 87 458999999999876 59999986 3 457899999999999999999999872 1 1248
Q ss_pred EEeEEEEeEEEeeCCCeeEEEeeC---------CCCceecEEEEeEEEEecC
Q 048431 330 ISDVIYQDIRGTSATPIAIKFDCS---------TKYPCKGIRLHNVHLRHLK 372 (396)
Q Consensus 330 i~nI~~~ni~~~~~~~~~~~i~~~---------~~~~~~ni~~~ni~v~~~~ 372 (396)
++||+|+||++..... ++.++.. +..+++||+|+||+....+
T Consensus 261 v~nI~~~NI~~~~v~~-~i~i~~~y~~~~~~~~~~~~i~nI~~~nI~gt~~~ 311 (422)
T 1rmg_A 261 VSNVLLENFIGHGNAY-SLDIDGYWSSMTAVAGDGVQLNNITVKNWKGTEAN 311 (422)
T ss_dssp EEEEEEEEEEEEEESC-SEEEETBCTTSCCBSSSCCEEEEEEEEEEEEEESC
T ss_pred EEEEEEEeEEEECccc-cEEEEeeccCCCcccCCCceEEEEEEEeEEEEecc
Confidence 9999999999987765 6777531 3457999999999998753
No 28
>1k5c_A Endopolygalacturonase; beta helical structure, glycoside hydrolase, silver-LEAF IND substance, hydrolase; HET: NAG; 0.96A {Chondrostereum purpureum} SCOP: b.80.1.3 PDB: 1kcc_A* 1kcd_A*
Probab=99.83 E-value=7.7e-19 Score=168.19 Aligned_cols=199 Identities=12% Similarity=0.172 Sum_probs=156.6
Q ss_pred EEEEEeecCeEEEEE--EEecC--Ccc-------------eEEEeeeecEEEEeEEEEcCCCCCCCCCeeeeceee-EEE
Q 048431 152 TLSITKSNNIRINGL--LSLNS--QMY-------------HIVINRCQDVLVEGAKIIAAGDSPNTDGIHVQQSRN-VII 213 (396)
Q Consensus 152 ~i~~~~~~nv~i~~~--~i~~~--~~~-------------~i~~~~~~nv~i~n~~i~~~~~~~~~DGi~~~~s~n-v~I 213 (396)
++.+. .+|++|.|- +|... ..| .+.+..|+ ++|+++++.++. ...+++..|++ |+|
T Consensus 60 ~i~~~-~~ni~I~G~~G~idG~G~~ww~~~~~~~~~~rP~~i~~~~~~-v~i~giti~nsp----~~~i~i~~~~n~v~i 133 (335)
T 1k5c_A 60 LFTID-GTGINFVGADHIFDGNGALYWDGKGTNNGTHKPHPFLKIKGS-GTYKKFEVLNSP----AQAISVGPTDAHLTL 133 (335)
T ss_dssp SEEEE-EEEEEEECTTCEEECCGGGTCCSCTTTSSSCCCCCSEEEEEE-EEEESCEEESCS----SCCEEEEEEEEEEEE
T ss_pred EEEEE-ccCEEEEeCccEEcCChhHhhhcccccCCCCCCeEEEEeceE-EEEEEEEEECCC----cceEEEEccCCeEEE
Confidence 56665 699999983 55322 112 37888999 999999999854 35799999999 999
Q ss_pred EecEEecC----------CceEEeCCCCccEEEEeeeEeCCc-eEEEeeccccCCCCCEEEEEEEeeEEeCCccEEEEEe
Q 048431 214 KSSSIKTG----------DDCISIGPGTNNLWIERVTCGPGH-GISIGSLAKDLDEEGVQNVTVFKTVFTGTTNGLRIKS 282 (396)
Q Consensus 214 ~n~~i~~~----------dD~i~i~~~~~ni~i~n~~~~~~~-gi~igs~g~~~~~~~~~ni~i~n~~~~~~~~gi~i~~ 282 (396)
+|+.|.+. .|++.+ + ++||+|+||++..++ .++|++- +||+|+||++... +|+.|++
T Consensus 134 ~~v~I~~~~~d~~~~~~NtDGidi-~-s~nV~I~n~~i~~gDDcIaiksg---------~nI~i~n~~~~~g-hGisIGS 201 (335)
T 1k5c_A 134 DGITVDDFAGDTKNLGHNTDGFDV-S-ANNVTIQNCIVKNQDDCIAINDG---------NNIRFENNQCSGG-HGISIGS 201 (335)
T ss_dssp ESCEEECGGGGGGGCCCSCCSEEE-E-CSSEEEESCEEESSSCSEEEEEE---------EEEEEESCEEESS-CCEEEEE
T ss_pred EEEEEECCCCcccccCCCCCeEcc-c-CCeEEEEeeEEEcCCCEEEeeCC---------eeEEEEEEEEECC-ccCeEee
Confidence 99999873 578999 5 999999999999876 5999872 8999999999986 6899998
Q ss_pred ecCCCCceEEcEEEEeeEeecCCccEEEEeecCCCCCCCCCCCcc-eEEEeEEEEeEEEeeCCCeeEEEee-------CC
Q 048431 283 WARPSNGFVRGIRFIDALMQNVQHPIIIDQNYCPHNLNCPGQISG-VKISDVIYQDIRGTSATPIAIKFDC-------ST 354 (396)
Q Consensus 283 ~~~~~~g~v~nI~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~-~~i~nI~~~ni~~~~~~~~~~~i~~-------~~ 354 (396)
.. ..+.|+||+|+|+++.+..++++|+.... .. +.++||+|+||+++.....|+.++. .|
T Consensus 202 ~g--~~~~v~nV~v~n~~~~~t~~girIKt~~g----------~~~G~v~nI~f~ni~~~~v~~~~i~i~~~Y~~~~~~p 269 (335)
T 1k5c_A 202 IA--TGKHVSNVVIKGNTVTRSMYGVRIKAQRT----------ATSASVSGVTYDANTISGIAKYGVLISQSYPDDVGNP 269 (335)
T ss_dssp EC--TTCEEEEEEEESCEEEEEEEEEEEEEETT----------CCSCEEEEEEEESCEEEEEEEEEEEEEEEETSSSSSC
T ss_pred cc--CCCCEEEEEEEeeEEECCCceEEEEEeCC----------CCcceEeeeEEEEEEEEccccccEEEEeeCCCCCCCC
Confidence 73 26899999999999999999999997643 22 4899999999999876534777763 12
Q ss_pred --CCceecEEEEeEE--EEecC--Ccccceee
Q 048431 355 --KYPCKGIRLHNVH--LRHLK--QEAKSSCN 380 (396)
Q Consensus 355 --~~~~~ni~~~ni~--v~~~~--~~~~~~c~ 380 (396)
..+++||+|+||+ ....+ .+..+.|+
T Consensus 270 ~~~~~i~nI~~~nI~~~Gt~~~~~~~i~i~c~ 301 (335)
T 1k5c_A 270 GTGAPFSDVNFTGGATTIKVNNAATRVTVECG 301 (335)
T ss_dssp CSSSCEEEEEECSSCEEEEECTTCEEEEEECS
T ss_pred CCCceEEEEEEEEEEEeeEEcCCceEEEEECC
Confidence 3579999999999 44443 23445554
No 29
>1hg8_A Endopolygalacturonase; hydrolase, pectin degradation; HET: NAG; 1.73A {Fusarium moniliforme} SCOP: b.80.1.3
Probab=99.83 E-value=1.8e-18 Score=166.80 Aligned_cols=203 Identities=18% Similarity=0.239 Sum_probs=159.0
Q ss_pred EEEEEeecCeEEEE---EEEecCC--c--------------ceEEE-e-eeecEEEEeEEEEcCCCCCCCCCeeeeceee
Q 048431 152 TLSITKSNNIRING---LLSLNSQ--M--------------YHIVI-N-RCQDVLVEGAKIIAAGDSPNTDGIHVQQSRN 210 (396)
Q Consensus 152 ~i~~~~~~nv~i~~---~~i~~~~--~--------------~~i~~-~-~~~nv~i~n~~i~~~~~~~~~DGi~~~~s~n 210 (396)
+|.+. .+|++|.| -+|.... . ..+.+ . .|+|++|+++++.++. ..++++..|++
T Consensus 63 ~i~~~-~~ni~I~G~~~G~IdG~G~~ww~~~~~~~~~~~rP~~i~~~~~~~~nv~I~giti~nsp----~~~i~i~~~~n 137 (349)
T 1hg8_A 63 PIVIS-GSNITITGASGHVIDGNGQAYWDGKGSNSNSNQKPDHFIVVQKTTGNSKITNLNIQNWP----VHCFDITGSSQ 137 (349)
T ss_dssp SEEEE-EESCEEEECTTCEEECCGGGTCCSCTTCTTSCCCCSEEEEEEEEESSEEEESCEEECCS----SEEEEEESCEE
T ss_pred eEEEE-CccEEEEecCCCEEcCCcchhhhcccccCCCCCCCeEEEEeecCcCcEEEEEEEEEcCC----CceEEEeccCC
Confidence 56664 59999999 5664321 1 15777 6 7889999999999853 46799999999
Q ss_pred EEEEecEEecC-----------------CceEEeCCCCccEEEEeeeEeCCc-eEEEeeccccCCCCCEEEEEEEeeEEe
Q 048431 211 VIIKSSSIKTG-----------------DDCISIGPGTNNLWIERVTCGPGH-GISIGSLAKDLDEEGVQNVTVFKTVFT 272 (396)
Q Consensus 211 v~I~n~~i~~~-----------------dD~i~i~~~~~ni~i~n~~~~~~~-gi~igs~g~~~~~~~~~ni~i~n~~~~ 272 (396)
|+|+|+.|.+. .|+|.+.+ ++||+|+||++..++ +++|++- +||+|+||++.
T Consensus 138 v~i~~~~I~~~~~~~~~~~~~~~~~~~NtDGid~~~-s~nV~I~n~~i~~gDDcIaiksg---------~nI~i~n~~~~ 207 (349)
T 1hg8_A 138 LTISGLILDNRAGDKPNAKSGSLPAAHNTDGFDISS-SDHVTLDNNHVYNQDDCVAVTSG---------TNIVVSNMYCS 207 (349)
T ss_dssp EEEEEEEEECGGGSSCCTTTTTSCSCCSCCSEEEES-CEEEEEEEEEEECSSCSEEESSE---------EEEEEEEEEEE
T ss_pred EEEEEEEEECCCCccccccccccccCCCCCeEEEcc-ccEEEEEeeEEecCCCeEEeeCC---------eEEEEEeEEEe
Confidence 99999999862 57888877 999999999998775 6999762 89999999998
Q ss_pred CCccEEEEEeecCCCCceEEcEEEEeeEeecCCccEEEEeecCCCCCCCCCCCcceEEEeEEEEeEEEeeCCCeeEEEee
Q 048431 273 GTTNGLRIKSWARPSNGFVRGIRFIDALMQNVQHPIIIDQNYCPHNLNCPGQISGVKISDVIYQDIRGTSATPIAIKFDC 352 (396)
Q Consensus 273 ~~~~gi~i~~~~~~~~g~v~nI~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~nI~~~ni~~~~~~~~~~~i~~ 352 (396)
+. +|+.|++......+.++||+|+|+++.+..+++.|+.... ..+.++||+|+||++......++.++.
T Consensus 208 ~g-hGisiGS~G~~~~~~v~nV~v~n~~~~~~~~GirIKt~~g----------~~G~v~nI~~~ni~~~~v~~~~i~i~~ 276 (349)
T 1hg8_A 208 GG-HGLSIGSVGGKSDNVVDGVQFLSSQVVNSQNGCRIKSNSG----------ATGTINNVTYQNIALTNISTYGVDVQQ 276 (349)
T ss_dssp SS-CCEEEEEESSSSCCEEEEEEEEEEEEEEEEEEEEEEEETT----------CCEEEEEEEEEEEEEEEEEEEEEEEEE
T ss_pred CC-cceEEccccccccCCEEEEEEEEEEEECCCcEEEEEecCC----------CCccccceEEEEEEEEccccccEEEEe
Confidence 75 6899998733245889999999999999999999997532 245899999999998876433666643
Q ss_pred C---------CC--CceecEEEEeEEEEecC--Ccccceee
Q 048431 353 S---------TK--YPCKGIRLHNVHLRHLK--QEAKSSCN 380 (396)
Q Consensus 353 ~---------~~--~~~~ni~~~ni~v~~~~--~~~~~~c~ 380 (396)
. |. .+++||+|+||+.+... .+..+.|+
T Consensus 277 ~Y~~~~~~~~p~~~~~i~~I~~~ni~gt~~~~~~~v~i~c~ 317 (349)
T 1hg8_A 277 DYLNGGPTGKPTNGVKISNIKFIKVTGTVASSAQDWFILCG 317 (349)
T ss_dssp EECSSSBCSCCCSSEEEEEEEEEEEEEEECTTSEEEEEECC
T ss_pred eccCCCCCCcccCCceEEEEEEEeEEEEeCCCCEEEEEEeC
Confidence 1 11 36999999999998765 24456664
No 30
>1x0c_A Isopullulanase; glycoside hydrolase family 49, glycoprotein, hydro; HET: NAG; 1.70A {Aspergillus niger} PDB: 1wmr_A* 2z8g_A*
Probab=99.78 E-value=1.3e-17 Score=168.99 Aligned_cols=250 Identities=14% Similarity=0.165 Sum_probs=170.9
Q ss_pred CCCcE-EEecCceEEEeceeecccCCCCcEEEEEeeEEEeeCCc------cccCC----CcceEEE------eceeeEEE
Q 048431 61 NESAT-IYVPKGRYLLGSVAFRSECKSPSITFLINGTLVAPTDY------RVLGQ----ANNWLSF------EGVSHVSI 123 (396)
Q Consensus 61 ~~g~~-v~iP~G~Y~~~~l~l~~~~~~~n~~l~~~G~l~~~~~~------~~~~~----~~~~i~~------~~~~nv~I 123 (396)
+++.+ |++++|.++.+++.+.+.+ . |++|.+.|+|.+.... ..|.. ....+.+ .+++||.|
T Consensus 220 ~s~~~~L~l~~GA~L~gs~~~~~~~-~-nv~ItG~GtIDG~G~~ww~~~~~~~~~~~~~rp~~i~~~~~~~~~~c~nV~I 297 (549)
T 1x0c_A 220 SSSVTWVYFAPGAYVKGAVEFLSTA-S-EVKASGHGVLSGEQYVWYADPDEGYQKASGANNNGLRMWRGTLGNSSQTFVL 297 (549)
T ss_dssp CTTCCEEEECTTEEEESCEEECCCS-S-EEEEESSCEEECTTSCTTEEGGGTTEECGGGCSCCCCSEEEECCSSCEEEEE
T ss_pred cCCCCeEecCCCCEEEEEEEEecCc-e-eEEEEeeEEEECCCceecccCcccccccccCCCceEEEeeccccCCceEEEE
Confidence 56777 9999999999988877422 2 8999999999876431 11211 0112333 78999999
Q ss_pred Ec-eEEeCCCCCcccccccCCCCCCCCceEEEEE-ee-cC--eEEEEEEEecCC---cceEEEeeeecEEEEeEEEEcCC
Q 048431 124 IG-GALDAKGTSLWACKTAAGSNCPNGATTLSIT-KS-NN--IRINGLLSLNSQ---MYHIVINRCQDVLVEGAKIIAAG 195 (396)
Q Consensus 124 ~G-g~idg~g~~~w~~~~~~~~~~~~~p~~i~~~-~~-~n--v~i~~~~i~~~~---~~~i~~~~~~nv~i~n~~i~~~~ 195 (396)
+| ...+.. .+.+++. .| ++ ++|+++++.++. .+++++. +||+|+||+|.+.+
T Consensus 298 ~Giti~Nsp------------------~w~i~i~~~~~~ni~V~I~n~~i~~~~~~NTDGidi~--~nV~I~n~~i~~gD 357 (549)
T 1x0c_A 298 NGVTVSAPP------------------FNSMDWSGNSLDLITCRVDDYKQVGAFYGQTDGLEMY--PGTILQDVFYHTDD 357 (549)
T ss_dssp ESCEEECCS------------------SCSEEEECSCGGGEEEEEEEEEEECCCBTTCCCCBCC--TTCEEEEEEEEESS
T ss_pred ECcEEECCC------------------ceeEEeeccCCCCCeEEEEeeEeEcCCCCCCCccccc--CCEEEEeeEEeCCC
Confidence 99 555432 2246644 45 69 999999997643 4678888 99999999999854
Q ss_pred CCCCCCCeeeeceeeEEEEecEEecCC-ce-EEeCC---CCccEEEEeeeEeCCc-------eEEEeecccc--C-----
Q 048431 196 DSPNTDGIHVQQSRNVIIKSSSIKTGD-DC-ISIGP---GTNNLWIERVTCGPGH-------GISIGSLAKD--L----- 256 (396)
Q Consensus 196 ~~~~~DGi~~~~s~nv~I~n~~i~~~d-D~-i~i~~---~~~ni~i~n~~~~~~~-------gi~igs~g~~--~----- 256 (396)
|+|.+.+ +||+|+||.+..+. .+ |.+++ ..+||+|+||++.... |..|++...+ +
T Consensus 358 -----DcIaIks-~NI~I~n~~~~~~~g~~~IsiGs~~~~V~NV~v~n~~i~~s~~~k~~~~g~iI~~~~~~~~g~~~~~ 431 (549)
T 1x0c_A 358 -----DGLKMYY-SNVTARNIVMWKESVAPVVEFGWTPRNTENVLFDNVDVIHQAYANAGNNPGIFGAVNNYLYAPDGLS 431 (549)
T ss_dssp -----CCEECCS-SSEEEEEEEEEECSSSCSEECCBSCCCEEEEEEEEEEEEECCCCSGGGCCCSEEECCBTTTCTTSCC
T ss_pred -----CEEEECC-CCEEEEeeEEEcCCCCceEEECCCCCcEEEEEEEeeEEECccccccccceEEEecccccccCccccC
Confidence 7888887 99999999998754 35 88874 4799999999996543 4225542111 1
Q ss_pred -C-CCCEEEEEEEeeEEeCCc-cEEEEEeecCCCCceEEcEEEEeeEeecCC-----ccEEEEeecCCCCCCCCCCCcce
Q 048431 257 -D-EEGVQNVTVFKTVFTGTT-NGLRIKSWARPSNGFVRGIRFIDALMQNVQ-----HPIIIDQNYCPHNLNCPGQISGV 328 (396)
Q Consensus 257 -~-~~~~~ni~i~n~~~~~~~-~gi~i~~~~~~~~g~v~nI~~~ni~~~~~~-----~~i~i~~~~~~~~~~~~~~~~~~ 328 (396)
+ .+.++||+|+|++|.+.. .|..+....+..++.++||+|+||++++.. ....+...+..- .|. ...
T Consensus 432 ~d~~G~i~nI~f~NI~i~nv~~~g~~~~~~~g~pg~~I~nI~i~NI~i~~~~~~~~~~~~~~i~G~~~~--~~~---~~~ 506 (549)
T 1x0c_A 432 SNHSTGNSNMTVRNITWSNFRAEGSSSALFRINPIQNLDNISIKNVSIESFEPLSINTTESWMPVWYDL--NNG---KQI 506 (549)
T ss_dssp SCCCCBEEEEEEEEEEEEEEEEEEEECCSEEECCSEEEEEEEEEEEEEEEECCGGGTCSCEEECCCBBT--TTC---CBC
T ss_pred cCCCceEccEEEEeEEEEeEEEeceEEeeecCCCCCcCccEEEEEEEEEccccccccccceEEeCCCcc--ccc---cce
Confidence 2 457999999999998865 554332222324567999999999998775 222222222210 011 123
Q ss_pred EEEeEEEEeEEEeeC
Q 048431 329 KISDVIYQDIRGTSA 343 (396)
Q Consensus 329 ~i~nI~~~ni~~~~~ 343 (396)
.++||+|+||++.+.
T Consensus 507 ~v~nI~f~NV~i~G~ 521 (549)
T 1x0c_A 507 TVTDFSIEGFTVGNT 521 (549)
T ss_dssp CEEEEEEEEEEETTE
T ss_pred eeeeEEEEeEEEeCe
Confidence 699999999998654
No 31
>1ogo_X Dextranase; hydrolase, dextran degradation, glycosidase; HET: BGC GLC; 1.65A {Penicillium minioluteum} SCOP: b.133.1.1 b.80.1.10 PDB: 1ogm_X*
Probab=99.77 E-value=2.2e-17 Score=167.29 Aligned_cols=236 Identities=13% Similarity=0.113 Sum_probs=168.6
Q ss_pred CCCcE-EEecCceEEEeceeecccCCCCcEEEEEeeEEEeeCCc------cccCC---CcceEEEe------ceeeEEEE
Q 048431 61 NESAT-IYVPKGRYLLGSVAFRSECKSPSITFLINGTLVAPTDY------RVLGQ---ANNWLSFE------GVSHVSII 124 (396)
Q Consensus 61 ~~g~~-v~iP~G~Y~~~~l~l~~~~~~~n~~l~~~G~l~~~~~~------~~~~~---~~~~i~~~------~~~nv~I~ 124 (396)
+.+-+ |++++|.++.+++.+.+. . |++|.+.|+|.+.... ..|+. ....+.+. +++||.|+
T Consensus 262 kSnvt~L~L~~GA~l~g~i~~~~~--~-nv~ItG~GtIDG~G~~ww~~~~~~~~~~~~rp~~i~~~~~~~~~~c~NV~I~ 338 (574)
T 1ogo_X 262 NSNTYWVYLAPGAYVKGAIEYFTK--Q-NFYATGHGILSGENYVYQANAGDNYIAVKSDSTSLRMWWHNNLGGGQTWYCV 338 (574)
T ss_dssp CTTCCEEEECTTEEEESCEEECCS--S-CEEEESSCEEECTTSCTTCBTTTTTBSCCCTTTBCCSEEECSCCSSEEEEEE
T ss_pred cCCCceEEecCCcEEEccEEEeCc--e-eEEEEeCEEEeCCCcccccccccccccccCCcceEEEEeccccCCceeEEEE
Confidence 45667 999999999999888763 3 8999999998765321 11110 01123333 79999999
Q ss_pred c-eEEeCCCCCcccccccCCCCCCCCceEEEEEeecCe--EEEEEEEecCC---cceEEEeeeecEEEEeEEEEcCCCCC
Q 048431 125 G-GALDAKGTSLWACKTAAGSNCPNGATTLSITKSNNI--RINGLLSLNSQ---MYHIVINRCQDVLVEGAKIIAAGDSP 198 (396)
Q Consensus 125 G-g~idg~g~~~w~~~~~~~~~~~~~p~~i~~~~~~nv--~i~~~~i~~~~---~~~i~~~~~~nv~i~n~~i~~~~~~~ 198 (396)
| ...+.. .+.+++.+|+|| +|+++++.+++ .+++++. +||+|+||+|.+.+
T Consensus 339 Giti~NSp------------------~w~i~~~~c~nV~~~I~nv~i~~~~~~nTDGIDi~--~NV~I~nc~I~~gD--- 395 (574)
T 1ogo_X 339 GPTINAPP------------------FNTMDFNGNSGISSQISDYKQVGAFFFQTDGPEIY--PNSVVHDVFWHVND--- 395 (574)
T ss_dssp SCEEECCS------------------SCSEEECSSSCEEEEEEEEEEECCCSTTCCCCBCC--TTCEEEEEEEEESS---
T ss_pred CeEEECCC------------------CcEEeecCCCChhhEEEeeEeeCCCCCCCccCccc--CCEEEEeeEEECCC---
Confidence 9 665531 225788999999 99999988653 4579888 99999999999854
Q ss_pred CCCCeeeeceeeEEEEecEEecCCc-e-EEeCC---CCccEEEEeeeEeCCc---------eEEEeeccccCC------C
Q 048431 199 NTDGIHVQQSRNVIIKSSSIKTGDD-C-ISIGP---GTNNLWIERVTCGPGH---------GISIGSLAKDLD------E 258 (396)
Q Consensus 199 ~~DGi~~~~s~nv~I~n~~i~~~dD-~-i~i~~---~~~ni~i~n~~~~~~~---------gi~igs~g~~~~------~ 258 (396)
|+|.+.+ +||+|+||.+..+.. + |.+++ ..+||+|+||++...+ +..||++..+.. .
T Consensus 396 --DcIaIks-~NI~I~nc~i~~g~g~g~IsIGS~~g~V~NV~v~N~~i~~~~~~~~~~~~~g~iiGs~~~y~~~~~~~~g 472 (574)
T 1ogo_X 396 --DAIKIYY-SGASVSRATIWKCHNDPIIQMGWTSRDISGVTIDTLNVIHTRYIKSETVVPSAIIGASPFYASGMSPDSR 472 (574)
T ss_dssp --CSEECCS-TTCEEEEEEEEECSSSCSEECCSSCCCEEEEEEEEEEEEECCCSSCCTTTTCEEEEECCCSSSSCCCEEE
T ss_pred --CEEEECC-ccEEEEeEEEECCCCCceEEEcCCCCcEEEEEEEeEEEECCcccceeccccceeeccccccccccccCCC
Confidence 7888877 999999999998753 4 88875 4799999999996432 444555432210 1
Q ss_pred CCEEEEEEEeeEEeCCccEEEEEeecCCCCceEEcEEEEeeEeec------CCc-cEEEEeecCCCCCCCCCCCcceEEE
Q 048431 259 EGVQNVTVFKTVFTGTTNGLRIKSWARPSNGFVRGIRFIDALMQN------VQH-PIIIDQNYCPHNLNCPGQISGVKIS 331 (396)
Q Consensus 259 ~~~~ni~i~n~~~~~~~~gi~i~~~~~~~~g~v~nI~~~ni~~~~------~~~-~i~i~~~~~~~~~~~~~~~~~~~i~ 331 (396)
.++ ||+|+|++|.+...++ |... ..+.++||+|+|+++++ ... +..+.. + . ..++
T Consensus 473 ~gV-NI~f~NI~~~~v~~~i-i~i~---p~~~I~nI~~~NI~i~g~~~~~~~~~~~~~i~G-~-----------~-~~v~ 534 (574)
T 1ogo_X 473 KSI-SMTVSNVVCEGLCPSL-FRIT---PLQNYKNFVVKNVAFPDGLQTNSIGTGESIIPA-A-----------S-GLTM 534 (574)
T ss_dssp EEE-EEEEEEEEECSSBCEE-EEEC---CSEEEEEEEEEEEEETTCBCCSTTCTTCEEECC-C-----------T-TCCE
T ss_pred ceE-EEEEEeEEEEceeEee-EEEC---CCCCEEEEEEEeEEEeCccccccccccceeEec-C-----------C-Cccc
Confidence 128 9999999999988875 4432 45689999999999986 211 111111 0 1 3679
Q ss_pred eEEEEeEEEeeC
Q 048431 332 DVIYQDIRGTSA 343 (396)
Q Consensus 332 nI~~~ni~~~~~ 343 (396)
||+|+||++.+.
T Consensus 535 nI~~~NV~i~g~ 546 (574)
T 1ogo_X 535 GLAISAWTIGGQ 546 (574)
T ss_dssp EEEEEEEEETTE
T ss_pred eEEEEeEEEeCE
Confidence 999999998644
No 32
>2inu_A Insulin fructotransferase; right-handed parallel beta-helix, lyase; 1.80A {Bacillus SP} PDB: 2inv_A*
Probab=99.61 E-value=1.7e-14 Score=137.97 Aligned_cols=248 Identities=14% Similarity=0.166 Sum_probs=170.4
Q ss_pred cccccEEEeecc----CccCCCCcccHHHHHHHHHHHhh------cCCCcEEEecCceEEE-eceeecccCCCCcEEEEE
Q 048431 25 SATSTIYNVLRC----GAKGNGITDSTQAFAKAWAAACA------SNESATIYVPKGRYLL-GSVAFRSECKSPSITFLI 93 (396)
Q Consensus 25 ~~~~~~~~v~d~----Ga~~dg~~d~t~aiq~Ai~~a~~------~~~g~~v~iP~G~Y~~-~~l~l~~~~~~~n~~l~~ 93 (396)
.+....|+|++| +|++++.+|++++|+++|++..+ .++|++|+||||+|.+ +++.+.. + .++|.+
T Consensus 9 ~~~~~~~~vt~~~~~~~~~~~~~~d~~~~i~~~ia~~~~~~~~~~A~pGdvI~L~~G~Y~l~g~ivIdk---p-~LtL~G 84 (410)
T 2inu_A 9 LNSPNTYDVTTWRIKAHPEVTAQSDIGAVINDIIADIKQRQTSPDARPGAAIIIPPGDYDLHTQVVVDV---S-YLTIAG 84 (410)
T ss_dssp ---CCEEETTTCCBTTBTTCCHHHHHHHHHHHHHHHHHHHCCCTTSCCCEEEECCSEEEEECSCEEECC---T-TEEEEC
T ss_pred cccCceEEEEEecccCCCcCCCchhHHHHHHHHHHHhhcccccccCCCCCEEEECCCeeccCCcEEEec---C-cEEEEe
Confidence 345789999999 89999999999999999987743 3689999999999985 8888864 1 488888
Q ss_pred ee--E----EEeeCCcccc---CCCcceEEEec-----------------eeeEEEEceEEeCCCCCcccccccCCCCCC
Q 048431 94 NG--T----LVAPTDYRVL---GQANNWLSFEG-----------------VSHVSIIGGALDAKGTSLWACKTAAGSNCP 147 (396)
Q Consensus 94 ~G--~----l~~~~~~~~~---~~~~~~i~~~~-----------------~~nv~I~Gg~idg~g~~~w~~~~~~~~~~~ 147 (396)
++ + |........| .+.+..+.+.. .++|+|.|-.|+|....-|- ....
T Consensus 85 ~~~g~~s~~Id~~~~~~g~~~~~g~Gs~I~V~a~~~~g~a~~V~~~g~~r~s~V~~~~v~I~G~~~~~~G------~s~~ 158 (410)
T 2inu_A 85 FGHGFFSRSILDNSNPTGWQNLQPGASHIRVLTSPSAPQAFLVKRAGDPRLSGIVFRDFCLDGVGFTPGK------NSYH 158 (410)
T ss_dssp SCCCCCCHHHHHTSCCTTCSCCSCCSEEEEECCCTTSCEEEEECCCSSSCEECCEEESCEEECCCCSSST------TSCC
T ss_pred cCCCcceeEEecccccCcccccCCCCcEEEEeccccccceeEEeeccCcccCCcEECCEEEECCEeecCC------CCcc
Confidence 64 2 3311011121 11122233322 27777777667665222111 1122
Q ss_pred CCceEEEEEe-ecCeEEEEEEEecCCcceEEEeeeecEEEEeEEEEcCCCCCCCCCeeeec-eeeEEEEecEEecCCce-
Q 048431 148 NGATTLSITK-SNNIRINGLLSLNSQMYHIVINRCQDVLVEGAKIIAAGDSPNTDGIHVQQ-SRNVIIKSSSIKTGDDC- 224 (396)
Q Consensus 148 ~~p~~i~~~~-~~nv~i~~~~i~~~~~~~i~~~~~~nv~i~n~~i~~~~~~~~~DGi~~~~-s~nv~I~n~~i~~~dD~- 224 (396)
.....|.+.. .++++|+++.|.+. .+++.+..+++.+|++..|.. ...||++++ ++...|+++.+...+||
T Consensus 159 ~~dAGI~v~~~~d~~~I~nn~i~~~-~fGI~l~~a~~~~I~~N~I~e-----~GNgI~L~G~~~~~~I~~N~i~~~~dG~ 232 (410)
T 2inu_A 159 NGKTGIEVASDNDSFHITGMGFVYL-EHALIVRGADALRVNDNMIAE-----CGNCVELTGAGQATIVSGNHMGAGPDGV 232 (410)
T ss_dssp CSCEEEEECSCEESCEEESCEEESC-SEEEEETTEESCEEESCEEES-----SSEEEEECSCEESCEEESCEEECCTTSE
T ss_pred cCceeEEEeccCCeEEEECCEEecc-cEEEEEccCCCcEEECCEEEe-----cCCceeeccccccceEecceeeecCCCC
Confidence 3345777775 88999999999886 589999999999999999994 346788887 88889999999988887
Q ss_pred -EEeCCCCccEEEEeeeE-eCC-ceEEEeeccccCCCCCEEEEEEEeeEEeCCccEEEEEeecCCCCceEEcEEEEee
Q 048431 225 -ISIGPGTNNLWIERVTC-GPG-HGISIGSLAKDLDEEGVQNVTVFKTVFTGTTNGLRIKSWARPSNGFVRGIRFIDA 299 (396)
Q Consensus 225 -i~i~~~~~ni~i~n~~~-~~~-~gi~igs~g~~~~~~~~~ni~i~n~~~~~~~~gi~i~~~~~~~~g~v~nI~~~ni 299 (396)
|.+.. +++.+|+++.+ ..+ +|+-+- ...+-.|+++++.+...|+.+-.... ....+++.+|...
T Consensus 233 gIyl~n-s~~~~I~~N~i~~~~R~gIh~m---------~s~~~~i~~N~f~~~~~Gi~~M~s~~-~~n~v~~N~f~~~ 299 (410)
T 2inu_A 233 TLLAEN-HEGLLVTGNNLFPRGRSLIEFT---------GCNRCSVTSNRLQGFYPGMLRLLNGC-KENLITANHIRRT 299 (410)
T ss_dssp EEEEES-EESCEEESCEECSCSSEEEEEE---------SCBSCEEESCEEEESSSCSEEEESSC-BSCEEESCEEEEE
T ss_pred EEEEEe-CCCCEEECCCcccCcceEEEEE---------ccCCCEEECCEEecceeEEEEEEcCC-CCCEEECCEEecc
Confidence 77776 78888888866 433 577662 22456788888888888875543211 1344554444444
No 33
>3gq8_A Preneck appendage protein; beta helix, viral protein; HET: NHE; 2.00A {Bacillus phage PHI29} PDB: 3gq7_A* 3gq9_A* 3gqa_A
Probab=99.50 E-value=1.9e-11 Score=123.22 Aligned_cols=222 Identities=13% Similarity=0.122 Sum_probs=145.6
Q ss_pred ceEEEeceeeEEEEceEEeCCCCCcccccccCCCCCCCCceEEEEEeecCeEEEEEEEecCCcceEEEee------eecE
Q 048431 111 NWLSFEGVSHVSIIGGALDAKGTSLWACKTAAGSNCPNGATTLSITKSNNIRINGLLSLNSQMYHIVINR------CQDV 184 (396)
Q Consensus 111 ~~i~~~~~~nv~I~Gg~idg~g~~~w~~~~~~~~~~~~~p~~i~~~~~~nv~i~~~~i~~~~~~~i~~~~------~~nv 184 (396)
.++.+.+++|++|++-.+..... +.+.+....+ | ++++++. |+||
T Consensus 135 ~lI~f~~c~NV~I~gVti~NSp~-----------------~gI~I~~~~~---------N---DGid~DGi~fd~~S~NV 185 (609)
T 3gq8_A 135 SNLSIRACHNVYIRDIEAVDCTL-----------------HGIDITCGGL---------D---YPYLGDGTTAPNPSENI 185 (609)
T ss_dssp CSEEEESCEEEEEEEEEEESCSS-----------------CSEEEECSSS---------S---CCCCCTTCCCSSCCEEE
T ss_pred cEEEEEeeceEEEEeeEEEeCCC-----------------CCeEEeCCCC---------C---ccccCCCccccccceeE
Confidence 46888899999999944322111 1122222211 1 3455555 9999
Q ss_pred EEEeEEEEcCCCCCCCCCeeeeceeeEEEEecEEecC-----CceEEeCCCCccEEEEeeeEeCC-ceEEEeeccccCCC
Q 048431 185 LVEGAKIIAAGDSPNTDGIHVQQSRNVIIKSSSIKTG-----DDCISIGPGTNNLWIERVTCGPG-HGISIGSLAKDLDE 258 (396)
Q Consensus 185 ~i~n~~i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~~-----dD~i~i~~~~~ni~i~n~~~~~~-~gi~igs~g~~~~~ 258 (396)
+|+||+|.+. ..|||.+.+|+||+|+||++... ..++.++++++||+|+||++.+. .|+.|++.+ +.
T Consensus 186 ~I~Nc~I~~t----GDDcIaIksseNI~I~Nc~~~gp~G~S~~~GIsIGsgs~NVtV~Nc~i~nt~~GIrIKt~~---~~ 258 (609)
T 3gq8_A 186 WIENCEATGF----GDDGITTHHSQYINILNCYSHDPRLTANCNGFEIDDGSRHVVLSNNRSKGCYGGIEIKAHG---DA 258 (609)
T ss_dssp EEESCEEESC----SSCSEEECSCEEEEEESCEEECCSSCSSCCSEEECTTCEEEEEESEEEESSSEEEEEEECT---TS
T ss_pred EEEeeEEEec----CCCEEEecCCeeEEEEeEEEECCCCCCCcccEEccCCcccEEEEeeEEECCCCEEEEEecC---CC
Confidence 9999999763 34899999999999999999543 57899998889999999999876 489999763 23
Q ss_pred CCEEEEEEEeeEEeCCccEEEEEeecC-----CCCceEEcEEEEeeEeecCC-c----------cEEEEe----------
Q 048431 259 EGVQNVTVFKTVFTGTTNGLRIKSWAR-----PSNGFVRGIRFIDALMQNVQ-H----------PIIIDQ---------- 312 (396)
Q Consensus 259 ~~~~ni~i~n~~~~~~~~gi~i~~~~~-----~~~g~v~nI~~~ni~~~~~~-~----------~i~i~~---------- 312 (396)
..++||+|.|+...+......+..... +......||+++|++..... + ++++..
T Consensus 259 ~~v~NV~I~n~vs~~nvrsyn~r~iG~~~a~dp~s~~a~nV~l~n~~~~~p~~~~~~y~~~~~r~l~vs~~~~v~i~~~~ 338 (609)
T 3gq8_A 259 PAAYNISINGHMSVEDVRSYNFRHIGHHAATAPQSVSAKNIVASNLVSIRPNNKRGFQDNATPRVLAVSAYYGVVINGLT 338 (609)
T ss_dssp CCCEEEEEEEEEEESCSEEEEEEETTSCSTTSCCCSSCEEEEEEEEEEESCCCTTCHHHHCCCEEEEEESCEEEEEEEEE
T ss_pred CccccEEEECCEeecCceEecceEEccccCCCCCcceecceEeecceEEeecccCceeeCCCcceEEEEcCCCeEEcCce
Confidence 468999999987776655444443211 23446889999999886542 1 333321
Q ss_pred ecCCCCCCCCCCCcce----EEEeEEEEeEEEeeCC--CeeEEEeeCCCCceecEEEEeEEEEec
Q 048431 313 NYCPHNLNCPGQISGV----KISDVIYQDIRGTSAT--PIAIKFDCSTKYPCKGIRLHNVHLRHL 371 (396)
Q Consensus 313 ~~~~~~~~~~~~~~~~----~i~nI~~~ni~~~~~~--~~~~~i~~~~~~~~~ni~~~ni~v~~~ 371 (396)
.+.++.. ... .+.. .-+|+++++|.+++-. ...+++.|.+ ..++.|+++|+++...
T Consensus 339 ~~~d~~y-~~~-~~~~~~q~~~~~~~l~~~~i~gf~~a~~~i~~~gg~-~~~~~v~i~n~~i~~s 400 (609)
T 3gq8_A 339 GYTDDPN-LLT-ETVVSVQFRARNCSLNGVVLTGFSNSENGIYVIGGS-RGGDAVNISNVTLNNS 400 (609)
T ss_dssp EECSCTT-SCC-SEEEEEETTCEEEEEEEEEEESCTTCSEEEEECCCC-CTTCCEEEEEEEEESC
T ss_pred EccCCcc-ccC-CceEEEEEecceeEEcceEEecccCCCCCeEEeCCC-CcCCeEEEeccEEeec
Confidence 1111111 011 1222 2479999999988653 3467776664 5567777777777643
No 34
>3gqn_A Preneck appendage protein; beta helix, beta barrel, ATP binding, viral protein; HET: ATP; 2.15A {Bacillus phage PHI29} PDB: 3suc_A*
Probab=99.49 E-value=2.2e-11 Score=124.70 Aligned_cols=222 Identities=13% Similarity=0.121 Sum_probs=141.2
Q ss_pred ceEEEeceeeEEEEceEEeCCCCCcccccccCCCCCCCCceEEEEEeecCeEEEEEEEecCCcceEEEee------eecE
Q 048431 111 NWLSFEGVSHVSIIGGALDAKGTSLWACKTAAGSNCPNGATTLSITKSNNIRINGLLSLNSQMYHIVINR------CQDV 184 (396)
Q Consensus 111 ~~i~~~~~~nv~I~Gg~idg~g~~~w~~~~~~~~~~~~~p~~i~~~~~~nv~i~~~~i~~~~~~~i~~~~------~~nv 184 (396)
.++.+.+++|++|++-++..... +.+.+....+ | ++++++. |+||
T Consensus 135 ~lI~f~~ckNV~I~gVti~NSp~-----------------~gI~I~np~~---------N---DGid~DGi~fdi~S~NV 185 (772)
T 3gqn_A 135 SNLSIRACHNVYIRDIEAVDCTL-----------------HGIDITCGGL---------D---YPYLGDGTTAPNPSENI 185 (772)
T ss_dssp CSEEEESCEEEEEEEEEEESCSS-----------------CSEEEECSSS---------S---CCCCCTTCCCSSCCEEE
T ss_pred cEEEEEeeceEEEEeEEEEeCCC-----------------CCEEEeCCCc---------C---CcCCCcCcccccccceE
Confidence 46888899999999943322111 1122222111 1 3455555 9999
Q ss_pred EEEeEEEEcCCCCCCCCCeeeeceeeEEEEecEEecC-----CceEEeCCCCccEEEEeeeEeCCc-eEEEeeccccCCC
Q 048431 185 LVEGAKIIAAGDSPNTDGIHVQQSRNVIIKSSSIKTG-----DDCISIGPGTNNLWIERVTCGPGH-GISIGSLAKDLDE 258 (396)
Q Consensus 185 ~i~n~~i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~~-----dD~i~i~~~~~ni~i~n~~~~~~~-gi~igs~g~~~~~ 258 (396)
+|+||+|.+. ..|||.+.+|+||+|+||++... ..++.++++++||+|+||++.+.. |+.|++.+ ..
T Consensus 186 ~I~Nc~I~nt----GDDcIAIksSeNI~I~Nc~c~gphG~S~~~GIsIGsgs~NVtV~Nc~~~nT~nGIRIKt~~---~g 258 (772)
T 3gqn_A 186 WIENCEATGF----GDDGITTHHSQYINILNCYSHDPRLTANCNGFEIDDGSRHVVLSNNRSKGCYGGIEIKAHG---DA 258 (772)
T ss_dssp EEESCEEESC----SSCSEEECSCEEEEEESCEEECCSSSSSCCSEEECTTCEEEEEEEEEEESSSEEEEECCCT---TS
T ss_pred EEEeeEEEec----CcCeEEecCCceEEEEeEEEECCCCCCCcccEEecCCcccEEEEceEEECCCcEEEEEEeC---CC
Confidence 9999999763 34899999999999999999543 578999988899999999998764 89998764 23
Q ss_pred CCEEEEEEEeeEEeCCccEEEEEeecC-----CCCceEEcEEEEeeEeecCC-c----------cEEEEe----------
Q 048431 259 EGVQNVTVFKTVFTGTTNGLRIKSWAR-----PSNGFVRGIRFIDALMQNVQ-H----------PIIIDQ---------- 312 (396)
Q Consensus 259 ~~~~ni~i~n~~~~~~~~gi~i~~~~~-----~~~g~v~nI~~~ni~~~~~~-~----------~i~i~~---------- 312 (396)
+.++||+|.++..........+..... +..-...||++.|++..... + ++++..
T Consensus 259 g~v~NV~I~gnis~~dvrsynir~iG~h~a~dp~s~~a~nV~l~n~~~~~P~~~~~ly~~~~praL~vsay~~v~i~~~~ 338 (772)
T 3gqn_A 259 PAAYNISINGHMSVEDVRSYNFRHIGHHAATAPQSVSAKNIVASNLVSIRPNNKRGFQDNATPRVLAVSAYYGVVINGLT 338 (772)
T ss_dssp CCCEEEEEEEEEEESCSEEEEECCTTSCSSSSCCCSSCEEEEEEEEEEESCCCSSCHHHHCCCEEEEEESCEEEEEEEEE
T ss_pred CccccEEEECCEEeccCeEecceEEccccCCCCCCccCccEEeecceEEcccccCceeeCCCcceEEEEcCCCcEecCce
Confidence 569999999866665433333322111 12236788999988876532 1 233321
Q ss_pred ecCCCCCCCCCCCcce----EEEeEEEEeEEEeeCC--CeeEEEeeCCCCceecEEEEeEEEEec
Q 048431 313 NYCPHNLNCPGQISGV----KISDVIYQDIRGTSAT--PIAIKFDCSTKYPCKGIRLHNVHLRHL 371 (396)
Q Consensus 313 ~~~~~~~~~~~~~~~~----~i~nI~~~ni~~~~~~--~~~~~i~~~~~~~~~ni~~~ni~v~~~ 371 (396)
.+.++.. ... .+.. .-+|+++++|.+++-. ...+++.|.+ ..++.|+++|+++...
T Consensus 339 ~igd~~y-~~~-~~~i~~q~~~~~~~ln~i~i~gf~~a~~~i~v~gg~-~~~~~v~i~n~~i~~s 400 (772)
T 3gqn_A 339 GYTDDPN-LLT-ETVVSVQFRARNCSLNGVVLTGFSNSENGIYVIGGS-RGGDAVNISNVTLNNS 400 (772)
T ss_dssp EECSCTT-SCC-SEEEEEETTCEEEEEEEEEEESCTTCSEEEEECCST-TCCEEEEEEEEEEESC
T ss_pred eccCccc-ccC-CceEEEEEecceeEEcceEEecccCCCCCeEEeCCC-CCCCeEEEeccEEeec
Confidence 1111111 001 1111 2479999999988653 3467776664 5567777777777643
No 35
>1h80_A IOTA-carrageenase; hydrolase, IOTA-carrageenan double helix degradation; 1.6A {Alteromonas SP} SCOP: b.80.1.8 PDB: 1ktw_A* 3lmw_A
Probab=99.43 E-value=2.2e-12 Score=127.91 Aligned_cols=159 Identities=18% Similarity=0.134 Sum_probs=119.6
Q ss_pred EeecCeEEEEE----EEecC-----CcceEEEeeeecEEEEeEEEEcCCCCCCCCCeeeeceeeEEEEecEEecCCceEE
Q 048431 156 TKSNNIRINGL----LSLNS-----QMYHIVINRCQDVLVEGAKIIAAGDSPNTDGIHVQQSRNVIIKSSSIKTGDDCIS 226 (396)
Q Consensus 156 ~~~~nv~i~~~----~i~~~-----~~~~i~~~~~~nv~i~n~~i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~ 226 (396)
.+.+|++|.|- ++... ....+.+..|+|++|+|+++.+.+. + ..+.+|.+. +.|++.
T Consensus 106 ~~~~nItI~G~Gg~~~iDG~G~~~~rp~~i~~~~~~Nv~I~gIti~n~w~------i--h~s~~V~i~------NtDGi~ 171 (464)
T 1h80_A 106 NIVRNFSFQGLGNGFLVDFKDSRDKNLAVFKLGDVRNYKISNFTIDDNKT------I--FASILVDVT------ERNGRL 171 (464)
T ss_dssp SCEEEEEEEECTTCEEEECTTCSCCBEEEEEECSEEEEEEEEEEEECCSC------B--SCSEEECEE------EETTEE
T ss_pred cCccceEEECcCcceEEeCCCCCCCCceEEEEEeeccEEEeeeEEeccce------E--eeceeeeee------cCCCce
Confidence 46778888875 33321 1235788899999999999997431 2 234444443 357777
Q ss_pred eCCCCccEEEEeeeEeCCc-eEEEeeccccCCCCCEEEEEEEeeEEeCCccEEEEEee-----cCCCCceEEcEEEEeeE
Q 048431 227 IGPGTNNLWIERVTCGPGH-GISIGSLAKDLDEEGVQNVTVFKTVFTGTTNGLRIKSW-----ARPSNGFVRGIRFIDAL 300 (396)
Q Consensus 227 i~~~~~ni~i~n~~~~~~~-gi~igs~g~~~~~~~~~ni~i~n~~~~~~~~gi~i~~~-----~~~~~g~v~nI~~~ni~ 300 (396)
+ .++||+|+||++..++ ++ |+. ....++||+|+||+|.+ .+|++|+++ .+ ..+.++||+|+|++
T Consensus 172 i--~s~nV~I~n~~I~~gddgi--Gs~----~~~~~~NV~V~n~~~~g-g~GIrIktg~d~IG~~-~~g~v~NI~~~Ni~ 241 (464)
T 1h80_A 172 H--WSRNGIIERIKQNNALFGY--GLI----QTYGADNILFRNLHSEG-GIALRMETDNLLMKNY-KQGGIRNIFADNIR 241 (464)
T ss_dssp E--EEEEEEEEEEEEESCCTTC--EEE----EESEEEEEEEEEEEEES-SEEEEEECCCHHHHHH-TCCEEEEEEEEEEE
T ss_pred e--eccCEEEeceEEecCCCeE--Eec----ccCCEeEEEEEeeEEEC-CCEEEEEeCCceeccC-CCCcEEEEEEEeEE
Confidence 7 4899999999999876 45 221 23578999999999999 899999987 44 67899999999999
Q ss_pred eecCCccEEEEeecCCCCCCCCCCCcceEEEeEEEEeEEEeeCCCeeEEEee
Q 048431 301 MQNVQHPIIIDQNYCPHNLNCPGQISGVKISDVIYQDIRGTSATPIAIKFDC 352 (396)
Q Consensus 301 ~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~nI~~~ni~~~~~~~~~~~i~~ 352 (396)
|+++..++.|+.. ...++||+|+||+++... .++.+..
T Consensus 242 ~~nv~~~I~I~p~-------------~~~isnItfeNI~~t~~~-~aI~i~q 279 (464)
T 1h80_A 242 CSKGLAAVMFGPH-------------FMKNGDVQVTNVSSVSCG-SAVRSDS 279 (464)
T ss_dssp EESSSEEEEEECT-------------TCBCCCEEEEEEEEESSS-CSEEECC
T ss_pred EECCceeEEEeCC-------------CceEeEEEEEEEEEEccc-eeEEEec
Confidence 9999999998721 136899999999999865 3666653
No 36
>2pyg_A Poly(beta-D-mannuronate) C5 epimerase 4; beta-helix, isomerase; 2.10A {Azotobacter vinelandii} PDB: 2pyh_A*
Probab=99.38 E-value=5.1e-11 Score=116.13 Aligned_cols=172 Identities=9% Similarity=0.099 Sum_probs=122.1
Q ss_pred eEEEEEeecCeEEEEEEEecCCcceEEEee-eecEEEEeEEEEcCCCCCCCCCeee--------eceeeEEEEecEEec-
Q 048431 151 TTLSITKSNNIRINGLLSLNSQMYHIVINR-CQDVLVEGAKIIAAGDSPNTDGIHV--------QQSRNVIIKSSSIKT- 220 (396)
Q Consensus 151 ~~i~~~~~~nv~i~~~~i~~~~~~~i~~~~-~~nv~i~n~~i~~~~~~~~~DGi~~--------~~s~nv~I~n~~i~~- 220 (396)
..|.+..+++.+|++.++.+...+++++.. +++++|++..+.. +.+|+.+ ..+++++|+++.+..
T Consensus 173 dGI~~~~s~~~~i~~N~~~~~~~~GI~~~~~s~~v~I~nN~i~~-----~~~g~~~~~~g~~~~~~s~nv~i~~N~~~~n 247 (377)
T 2pyg_A 173 DGFVADYLVDSVFENNVAYANDRHGFNVVTSTHDFVMTNNVAYG-----NGSSGLVVQRGLEDLALPSNILIDGGAYYDN 247 (377)
T ss_dssp CSEEEESEEEEEEESCEEESCSSCSEEEETTCEEEEEESCEEES-----CSSCSEEEECCSSCCCCCEEEEEESCEEESC
T ss_pred CceeEeccCCcEEECcEEEccccCcEEEEeccCCeEEECCEEEC-----ccCceEEEeccccCCCCCccEEEECCEEEcC
Confidence 457778888888998877777789999888 9999999999996 4466766 678999999999875
Q ss_pred CCceEEeCCCCccEEEEeeeEeCC--ceEEEeeccccCCCCCEEEEEEEeeEEeCCcc-----EEEEEeecCCCCc---e
Q 048431 221 GDDCISIGPGTNNLWIERVTCGPG--HGISIGSLAKDLDEEGVQNVTVFKTVFTGTTN-----GLRIKSWARPSNG---F 290 (396)
Q Consensus 221 ~dD~i~i~~~~~ni~i~n~~~~~~--~gi~igs~g~~~~~~~~~ni~i~n~~~~~~~~-----gi~i~~~~~~~~g---~ 290 (396)
...++.+.. +++++|+++++... .|+.+. ..++++|+|++|.+... .+.+..+.+ ..+ .
T Consensus 248 ~~~Gi~~~~-~~~v~i~~N~i~~~~~~GI~i~---------g~~~~~i~~N~i~~n~~~~~~~~v~~~~~~~-~~~~~~~ 316 (377)
T 2pyg_A 248 AREGVLLKM-TSDITLQNADIHGNGSSGVRVY---------GAQDVQILDNQIHDNAQAAAVPEVLLQSFDD-TAGASGT 316 (377)
T ss_dssp SSCSEEEEE-EEEEEEESCEEESCSSCSEEEE---------EEEEEEEESCEEESCCSSSSCCSEEEECEEE-TTSSSCE
T ss_pred ccCceEecc-ccCeEEECCEEECCCCceEEEe---------cCCCcEEECcEEECCcccccccceEEEEecC-CCcccee
Confidence 456788777 89999999999764 688884 25899999999998643 233333222 111 1
Q ss_pred ---EEcEEEEeeEeecCCc-cEEEEeecCCCCCCCCCCCcceEEEeEEEEeEEEeeCCCeeEEEee
Q 048431 291 ---VRGIRFIDALMQNVQH-PIIIDQNYCPHNLNCPGQISGVKISDVIYQDIRGTSATPIAIKFDC 352 (396)
Q Consensus 291 ---v~nI~~~ni~~~~~~~-~i~i~~~~~~~~~~~~~~~~~~~i~nI~~~ni~~~~~~~~~~~i~~ 352 (396)
-++++++++++.+... +..|... . . ..+++++++..+..... ++.+.+
T Consensus 317 ~~~~~~~~i~~N~i~g~~~~~~~i~~~-~---~---------~~~~~~i~~n~i~~~~~-~v~~~g 368 (377)
T 2pyg_A 317 YYTTLNTRIEGNTISGSANSTYGIQER-N---D---------GTDYSSLIDNDIAGVQQ-PIQLYG 368 (377)
T ss_dssp EECCBCCEEESCEEECCSSCCEEEEEC-S---S---------SCBCCEEESCEEESSSE-EEECCC
T ss_pred eeeccCeEEECCEEECcCCCccceEEc-c---C---------CCccEEEECcEEeCCcc-ceEEEc
Confidence 3789999999998753 2233321 1 0 12466666666665543 455443
No 37
>1ru4_A Pectate lyase, PEL9A; parallel beta-helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.9
Probab=99.35 E-value=6e-11 Score=115.87 Aligned_cols=251 Identities=17% Similarity=0.141 Sum_probs=161.6
Q ss_pred cccccEEEeeccCcc-CCC-CcccHHHHHHHHHHHhhcCCCcEEEecCceEE--E-----eceeeccc-CCCCcEEEEEe
Q 048431 25 SATSTIYNVLRCGAK-GNG-ITDSTQAFAKAWAAACASNESATIYVPKGRYL--L-----GSVAFRSE-CKSPSITFLIN 94 (396)
Q Consensus 25 ~~~~~~~~v~d~Ga~-~dg-~~d~t~aiq~Ai~~a~~~~~g~~v~iP~G~Y~--~-----~~l~l~~~-~~~~n~~l~~~ 94 (396)
.+.+.++.|..-|.. ++| .....-.||+|++.| ++|++|+|.+|+|. + ..+.+... ...+.++|...
T Consensus 11 ~~~~~~~yVsp~Gsd~~~G~t~~~P~tiq~Ai~~a---~pGdtI~l~~GtY~~~~~e~~~~~i~~~~sGt~~~pIti~~~ 87 (400)
T 1ru4_A 11 ISTKRIYYVAPNGNSSNNGSSFNAPMSFSAAMAAV---NPGELILLKPGTYTIPYTQGKGNTITFNKSGKDGAPIYVAAA 87 (400)
T ss_dssp CCCSCEEEECTTCCTTCCSSSTTSCBCHHHHHHHC---CTTCEEEECSEEEECCCBTTBCCCEEECCCCBTTBCEEEEEG
T ss_pred ccCccEEEEcCCCCCCCCCccccCCccHHHHHhhC---CCCCEEEECCCeEccccccccceeEEecCCCCCCCCEEEEEe
Confidence 445678888776643 333 222222799999876 78999999999998 2 34554320 00113777775
Q ss_pred e----EEEeeCCcc-ccCCCcceEEEeceeeEEEEceEEeCCCCCcccccccCCCCCCCCceEEEEEeecCeEEEEEEEe
Q 048431 95 G----TLVAPTDYR-VLGQANNWLSFEGVSHVSIIGGALDAKGTSLWACKTAAGSNCPNGATTLSITKSNNIRINGLLSL 169 (396)
Q Consensus 95 G----~l~~~~~~~-~~~~~~~~i~~~~~~nv~I~Gg~idg~g~~~w~~~~~~~~~~~~~p~~i~~~~~~nv~i~~~~i~ 169 (396)
+ +|. ..... .+......+.+ ..++++|+|-.+...+. + .|.+.. .+.+|+++++.
T Consensus 88 ~g~~~vI~-~~~~~g~~~~~~~~i~i-~~~~~~i~gl~I~n~g~----------------~-GI~v~g-s~~~i~n~~i~ 147 (400)
T 1ru4_A 88 NCGRAVFD-FSFPDSQWVQASYGFYV-TGDYWYFKGVEVTRAGY----------------Q-GAYVIG-SHNTFENTAFH 147 (400)
T ss_dssp GGCCEEEE-CCCCTTCCCTTCCSEEE-CSSCEEEESEEEESCSS----------------C-SEEECS-SSCEEESCEEE
T ss_pred cCCCCEEe-CCccCCccccceeEEEE-ECCeEEEEeEEEEeCCC----------------C-cEEEeC-CCcEEEeEEEE
Confidence 2 333 21100 01000022444 46778888855544332 1 456655 78899999999
Q ss_pred cCCcceEEEeee-ecEEEEeEEEEcCCC----CCCCCCeeeec--eeeEEEEecEEec-CCceEEeCCCCccEEEEeeeE
Q 048431 170 NSQMYHIVINRC-QDVLVEGAKIIAAGD----SPNTDGIHVQQ--SRNVIIKSSSIKT-GDDCISIGPGTNNLWIERVTC 241 (396)
Q Consensus 170 ~~~~~~i~~~~~-~nv~i~n~~i~~~~~----~~~~DGi~~~~--s~nv~I~n~~i~~-~dD~i~i~~~~~ni~i~n~~~ 241 (396)
+....++.+... .+.+|+++++....+ +.+.|||.+.. .++.+|++|++.. .||++.+......++|+||..
T Consensus 148 ~n~~~GI~l~~~~s~n~I~nn~i~~N~d~~~~g~~~dG~~~~~~~g~Gn~~~~~~~~~N~ddGidl~~~~~~v~i~nn~a 227 (400)
T 1ru4_A 148 HNRNTGLEINNGGSYNTVINSDAYRNYDPKKNGSMADGFGPKQKQGPGNRFVGCRAWENSDDGFDLFDSPQKVVIENSWA 227 (400)
T ss_dssp SCSSCSEEECTTCCSCEEESCEEECCCCTTTTTSSCCSEEECTTCCSCCEEESCEEESCSSCSEECTTCCSCCEEESCEE
T ss_pred CCCceeEEEEcccCCeEEEceEEEcccCccccCcccceEEEEecccCCeEEECCEEeecCCCcEEEEecCCCEEEEeEEE
Confidence 987778998864 488999999997543 24679998864 3788999999865 689999977677899999987
Q ss_pred eC--------------CceEEEeeccccCCCCCEEEEEEEeeEEeCC-ccEEEEEeecCCCCceEEcEEEEeeEeecCCc
Q 048431 242 GP--------------GHGISIGSLAKDLDEEGVQNVTVFKTVFTGT-TNGLRIKSWARPSNGFVRGIRFIDALMQNVQH 306 (396)
Q Consensus 242 ~~--------------~~gi~igs~g~~~~~~~~~ni~i~n~~~~~~-~~gi~i~~~~~~~~g~v~nI~~~ni~~~~~~~ 306 (396)
+. +.|+.+|.+ ....+.+++||...+. .+|+...... .+++++|.++.+...
T Consensus 228 ~~Ng~~~~~~n~~~gngnGf~lgg~------~~~~~~~v~nn~a~~N~~~G~~~n~~~-------~~~~i~nNt~~~N~~ 294 (400)
T 1ru4_A 228 FRNGINYWNDSAFAGNGNGFKLGGN------QAVGNHRITRSVAFGNVSKGFDQNNNA-------GGVTVINNTSYKNGI 294 (400)
T ss_dssp ESTTCCCSCCTTCCCCCCSEECCCT------TCCCCCEEESCEEESCSSEEEECTTCS-------SCCEEESCEEESSSE
T ss_pred ECCccccccccccccCCCCEEEecc------CCcCCEEEEeeEEECCcCcCEeecCCC-------CCEEEECeEEECCcc
Confidence 42 236777654 2345778899988875 4576553221 236777777766655
Q ss_pred cEEEE
Q 048431 307 PIIID 311 (396)
Q Consensus 307 ~i~i~ 311 (396)
.+.+.
T Consensus 295 ~~~~~ 299 (400)
T 1ru4_A 295 NYGFG 299 (400)
T ss_dssp EEEEC
T ss_pred ceEEe
Confidence 55553
No 38
>2x6w_A Tail spike protein; viral protein, beta-helix, hydrolase; HET: RAM GLC GLA NAG NDG; 1.35A {Enterobacteria phage HK620} PDB: 2vji_A 2vjj_A* 2x85_A* 2x6x_A* 2x6y_A*
Probab=99.35 E-value=1.5e-11 Score=123.37 Aligned_cols=226 Identities=11% Similarity=0.000 Sum_probs=149.4
Q ss_pred cEEEEEeeEEEeeCCccccCC-----CcceEEEeceeeEEEEceEEeCCCCCcccccccCCCCCCCCceEEEE---Eeec
Q 048431 88 SITFLINGTLVAPTDYRVLGQ-----ANNWLSFEGVSHVSIIGGALDAKGTSLWACKTAAGSNCPNGATTLSI---TKSN 159 (396)
Q Consensus 88 n~~l~~~G~l~~~~~~~~~~~-----~~~~i~~~~~~nv~I~Gg~idg~g~~~w~~~~~~~~~~~~~p~~i~~---~~~~ 159 (396)
|++|.+.|+|.+... ..|+. .++.+.+.+++ |+|-++... + ..+.+++ ..|+
T Consensus 151 NItItG~GtIDGqG~-~wW~~~~~~~~RP~l~f~~c~---I~GITi~NS-D---------------P~w~I~iG~~~~c~ 210 (600)
T 2x6w_A 151 NCHIYGHGVVDFGGY-EFGASSQLRNGVAFGRSYNCS---VTGITFQNG-D---------------VTWAITLGWNGYGS 210 (600)
T ss_dssp EEEEESSCEEECTTC-CCSSTTCCEEEEECCSEEEEE---EESCEEESC-C---------------CSCSEEECBTTBEE
T ss_pred eEEEecceeeeCCcc-ccccccccCCCCCEEEEeeeE---EeCeEEECC-C---------------CccEEEeCCCCCcc
Confidence 788888889887433 22321 12234444444 777333322 0 1236788 8999
Q ss_pred CeEEEEEE----EecCC-cceEEEeeeecEEEEeEEEEcCCCCCCCCCeee-ecee--eEEEEecEEecCCceEEeCC--
Q 048431 160 NIRINGLL----SLNSQ-MYHIVINRCQDVLVEGAKIIAAGDSPNTDGIHV-QQSR--NVIIKSSSIKTGDDCISIGP-- 229 (396)
Q Consensus 160 nv~i~~~~----i~~~~-~~~i~~~~~~nv~i~n~~i~~~~~~~~~DGi~~-~~s~--nv~I~n~~i~~~dD~i~i~~-- 229 (396)
||+|++++ |.+++ .+++ |+|+||+|.+.+ |+|.+ .+.+ ++.++ .+..+..+|++++
T Consensus 211 NVtI~nvtfi~aI~sspNTDGI-------V~I~nc~I~tGD-----DCIAI~KSGs~~ni~~e--~~~~GHgGISIGSe~ 276 (600)
T 2x6w_A 211 NCYVRKCRFINLVNSSVNADHS-------TVYVNCPYSGVE-----SCYFSMSSSFARNIACS--VQLHQHDTFYRGSTV 276 (600)
T ss_dssp EEEEESCEEECCCCCSSCCCEE-------EEEECSSSEEEE-----SCEEECCCTTHHHHEEE--EEECSSSEEEESCEE
T ss_pred cEEEeCeEEcceEecCCCCCEE-------EEEEeeEEecCC-----cEEEEecCCCcCCeEEE--EEcCCCCcEEecccc
Confidence 99999999 77643 3666 999999999743 78888 6432 45666 5666777999987
Q ss_pred --CCccEEEEeeeEeCCceEEEeeccccCCCCCEEEEEEEeeEEeCCccEEEEEeec-CCCCceEEcEEEEeeEeecCCc
Q 048431 230 --GTNNLWIERVTCGPGHGISIGSLAKDLDEEGVQNVTVFKTVFTGTTNGLRIKSWA-RPSNGFVRGIRFIDALMQNVQH 306 (396)
Q Consensus 230 --~~~ni~i~n~~~~~~~gi~igs~g~~~~~~~~~ni~i~n~~~~~~~~gi~i~~~~-~~~~g~v~nI~~~ni~~~~~~~ 306 (396)
+.+||+|+| .+. +.. +..+.++||+|+|++|.+...++.+.... +...+.++||+|+||+.+....
T Consensus 277 ~ggV~NV~V~N-rIK--------t~~--G~GG~V~NItfeNI~m~nV~~~I~i~q~~~~~s~~~IsnItfkNItgTsas~ 345 (600)
T 2x6w_A 277 NGYCRGAYVVM-HAA--------EAA--GAGSYAYNMQVENNIAVIYGQFVILGSDVTATVSGHLNDVIVSGNIVSIGER 345 (600)
T ss_dssp EEESEEEEEEE-CGG--------GCT--TTCSEEEEEEEESCEEEESSEEEEEEECBCSSCBCEEEEEEEESCEEEECSC
T ss_pred cCcEEEEEEEE-EEE--------eec--CCCceEEEEEEEEEEEEccceEEEeCCCCCCCCCceEEEEEEEeEEEEeccc
Confidence 368888888 332 221 12356999999999999998888887642 2356799999999999986542
Q ss_pred c-------EEEEeecCCCCCCCCCCCcceEEEeEEEEeEEEeeCC----CeeEEEeeCCCCceecEEEEeEE
Q 048431 307 P-------IIIDQNYCPHNLNCPGQISGVKISDVIYQDIRGTSAT----PIAIKFDCSTKYPCKGIRLHNVH 367 (396)
Q Consensus 307 ~-------i~i~~~~~~~~~~~~~~~~~~~i~nI~~~ni~~~~~~----~~~~~i~~~~~~~~~ni~~~ni~ 367 (396)
+ ..+..... .| .......|++|+|+|++..... .+++.+ ...+++|+|.+=.
T Consensus 346 aav~~~~g~~i~g~p~----~~-~~~~~~~Ie~V~~~~~~~~~~~~~~~~~~~~~----~~~~~g~~~~~~~ 408 (600)
T 2x6w_A 346 AAFSAPFGAFIDIGPD----NS-GASNVQDIQRVLVTGNSFYAPANITDSAAITL----RANLNGCTFIANN 408 (600)
T ss_dssp CTTSSSCEEEEEECCC----TT-CCSSSCCEEEEEEESCEEECCTTCSSEEEEEE----CSCBSCEEEESCE
T ss_pred cccccccceEEEecCc----cc-ccccccceeEEEEeceEEEcCCccCCCcceee----eccccceEEecCc
Confidence 1 34443211 11 1123458999999999987643 223333 3456788887765
No 39
>1dbg_A Chondroitinase B; beta helix, polysaccharide lyase, dematan sulfate; HET: MAN RAM GCU MXY G4D BGC; 1.70A {Pedobacter heparinus} SCOP: b.80.1.4 PDB: 1dbo_A* 1ofl_A* 1ofm_A*
Probab=99.29 E-value=1.7e-10 Score=115.48 Aligned_cols=222 Identities=9% Similarity=0.035 Sum_probs=132.3
Q ss_pred cHHHHHHHHHHHhhcCCCcEEEecCceEEEeceeeccc-CCCCcEEEEEe--e--EEEeeCCccccCCCcceEEEeceee
Q 048431 46 STQAFAKAWAAACASNESATIYVPKGRYLLGSVAFRSE-CKSPSITFLIN--G--TLVAPTDYRVLGQANNWLSFEGVSH 120 (396)
Q Consensus 46 ~t~aiq~Ai~~a~~~~~g~~v~iP~G~Y~~~~l~l~~~-~~~~n~~l~~~--G--~l~~~~~~~~~~~~~~~i~~~~~~n 120 (396)
+.+.||+||++| ++|++|+|++|+|.-..+.+... ...+.++|..+ + +|.+. ..+.+. .++
T Consensus 30 ~~~~Lq~Ai~~A---~pGDtI~L~~GtY~~~~i~i~~sGt~~~pItl~~~~~~~~vi~G~----------~~l~i~-g~~ 95 (506)
T 1dbg_A 30 SNETLYQVVKEV---KPGGLVQIADGTYKDVQLIVSNSGKSGLPITIKALNPGKVFFTGD----------AKVELR-GEH 95 (506)
T ss_dssp SHHHHHHHHHHC---CTTCEEEECSEEEETCEEEECCCCBTTBCEEEEESSTTSEEEEES----------CEEEEC-SSS
T ss_pred CHHHHHHHHHhC---CCCCEEEECCCEEecceEEEecCCcCCCCEEEECCCCCccEEeCC----------ceEEEE-cCC
Confidence 466899999876 78999999999997545665210 00125777765 2 22221 123443 477
Q ss_pred EEEEceEEeCCCCCcccccccCCCCCCCCceEEEEEeecCeEEEEEEEecCCcc-eEEEe--------eeecEEEEeEEE
Q 048431 121 VSIIGGALDAKGTSLWACKTAAGSNCPNGATTLSITKSNNIRINGLLSLNSQMY-HIVIN--------RCQDVLVEGAKI 191 (396)
Q Consensus 121 v~I~Gg~idg~g~~~w~~~~~~~~~~~~~p~~i~~~~~~nv~i~~~~i~~~~~~-~i~~~--------~~~nv~i~n~~i 191 (396)
++|+|-++.+.+..... .. ...+..+.+. .++++|+++.|.+...- .+.+. ..++.+|++++|
T Consensus 96 v~i~GL~i~~~~~~~~~-~~------~~~~~~iav~-G~~~~I~nn~I~~~~~gd~i~i~~~~~~~~l~g~~n~I~~N~I 167 (506)
T 1dbg_A 96 LILEGIWFKDGNRAIQA-WK------SHGPGLVAIY-GSYNRITACVFDCFDEANSAYITTSLTEDGKVPQHCRIDHCSF 167 (506)
T ss_dssp EEEESCEEEEECCCTTT-CC------TTSCCSEEEC-SSSCEEESCEEESCCSSCSCSEEECCCTTCCCCCSCEEESCEE
T ss_pred EEEECeEEECCCcceee-ee------cccccceEEe-cCCeEEEeeEEEcCCCCceeeEeecccceeeeccccEEECcEE
Confidence 88888555443321000 00 0012233333 58899999999876331 13332 567789999999
Q ss_pred EcCCCCCCCC----Ceeeec-------eeeEEEEecEEecC------CceEEeCC---CCccEEEEeeeEeCCc-eEEEe
Q 048431 192 IAAGDSPNTD----GIHVQQ-------SRNVIIKSSSIKTG------DDCISIGP---GTNNLWIERVTCGPGH-GISIG 250 (396)
Q Consensus 192 ~~~~~~~~~D----Gi~~~~-------s~nv~I~n~~i~~~------dD~i~i~~---~~~ni~i~n~~~~~~~-gi~ig 250 (396)
.+..+..... ||+++. +.+.+|+++.|... -+.+.++. .+++.+|+++.+...+ |.++-
T Consensus 168 ~Gk~~~G~~i~gnngI~l~~~~~~~~~~~~~~I~nN~f~~~~~~~N~~e~iR~G~h~m~s~~~~VenN~f~~~~gg~aim 247 (506)
T 1dbg_A 168 TDKITFDQVINLNNTARAIKDGSVGGPGMYHRVDHCFFSNPQKPGNAGGGIRIGYYRNDIGRCLVDSNLFMRQDSEAEII 247 (506)
T ss_dssp ECCCSSSCSEEECSSCCCSCCCSCCCCCCCCEEESCEEEECCCSSSCCCSEEECSSTTCBCCCEEESCEEEEECSSSEEE
T ss_pred ECCcCcceEEecCceeEeccCcccccccCCeEEeCcEEcccccCCCccccEEEEEEecccCCcEEECCEEEeccCcEEEE
Confidence 9854333333 777775 36899999999853 34555542 2578899999887544 23332
Q ss_pred eccccCCCCCEEEEEEEeeEEeCCccEEEEEeecCCCCceEEcEEEEee
Q 048431 251 SLAKDLDEEGVQNVTVFKTVFTGTTNGLRIKSWARPSNGFVRGIRFIDA 299 (396)
Q Consensus 251 s~g~~~~~~~~~ni~i~n~~~~~~~~gi~i~~~~~~~~g~v~nI~~~ni 299 (396)
+. ...+.+|+++++.++..++.+... ....|++-+|.+.
T Consensus 248 ~s-------kS~~n~i~~N~~~~~~ggi~l~~~---~~s~I~~N~f~gN 286 (506)
T 1dbg_A 248 TS-------KSQENVYYGNTYLNCQGTMNFRHG---DHQVAINNFYIGN 286 (506)
T ss_dssp EE-------ESBSCEEESCEEESCSSEEEEEEC---SSCEEESCEEEEC
T ss_pred EE-------ecCCEEEECCEEEcccCcEEEeec---CccEEECCEEECC
Confidence 21 001358889999888878777642 3345555555543
No 40
>3eqn_A Glucan 1,3-beta-glucosidase; tandem beta-helix domains, glycosidase, hydrolase; HET: NAG BMA; 1.70A {Phanerochaete chrysosporium} PDB: 3eqo_A*
Probab=99.17 E-value=3.4e-10 Score=115.95 Aligned_cols=93 Identities=19% Similarity=0.288 Sum_probs=69.9
Q ss_pred cccEEEeeccCccCCCCcccHHHHHHHHHHHhhcCCCcEEEecCceEEEe-ceeecccCCCCcEEEEEee--EEEeeCCc
Q 048431 27 TSTIYNVLRCGAKGNGITDSTQAFAKAWAAACASNESATIYVPKGRYLLG-SVAFRSECKSPSITFLING--TLVAPTDY 103 (396)
Q Consensus 27 ~~~~~~v~d~Ga~~dg~~d~t~aiq~Ai~~a~~~~~g~~v~iP~G~Y~~~-~l~l~~~~~~~n~~l~~~G--~l~~~~~~ 103 (396)
....++|+||||++||.+|||+|||+||+++ .++++||||+|+|++. .|.++. ++.|.+++ +|....
T Consensus 397 ~~~~vnVkd~GA~GDG~tDDT~Ai~~al~aa---~~g~~v~~P~G~Y~vt~Ti~ip~-----~~~ivG~~~~~I~~~G-- 466 (758)
T 3eqn_A 397 PSDFVSVRSQGAKGDGHTDDTQAIKNVFAKY---AGCKIIFFDAGTYIVTDTIQIPA-----GTQIVGEVWSVIMGTG-- 466 (758)
T ss_dssp GGGEEETTTTTCCCEEEEECHHHHHHHHHHH---TTTSEEECCSEEEEESSCEEECT-----TCEEECCSSEEEEECS--
T ss_pred ccceEEeeeccccCCCCchhHHHHHHHHHHh---cCCCEEEECCCEeEECCeEEcCC-----CCEEEecccceEecCC--
Confidence 3568999999999999999999999999855 5789999999999876 688885 89999997 555432
Q ss_pred ccc---CCCcceEEE---eceeeEEEEceEEe
Q 048431 104 RVL---GQANNWLSF---EGVSHVSIIGGALD 129 (396)
Q Consensus 104 ~~~---~~~~~~i~~---~~~~nv~I~Gg~id 129 (396)
..| ..+.+.+.+ .+...+.|.|-.++
T Consensus 467 ~~F~d~~~P~pvv~VG~~gd~G~veisdl~~~ 498 (758)
T 3eqn_A 467 SKFTDYNNPQPVIQVGAPGSSGVVEITDMIFT 498 (758)
T ss_dssp GGGCCTTSCEEEEEESCTTCBSCEEEESCEEE
T ss_pred ccccCCCCCeeeEEeCCCCCCCeEEEEeEEEE
Confidence 222 223455655 23456777774444
No 41
>1pcl_A Pectate lyase E; lyase (acting on polysaccharides); 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1
Probab=98.88 E-value=1.5e-07 Score=90.04 Aligned_cols=97 Identities=21% Similarity=0.270 Sum_probs=64.1
Q ss_pred CCCCeeeeceeeEEEEecEEecC------------------CceEEeCCCCccEEEEeeeEeCCc-eEEEeeccccC-CC
Q 048431 199 NTDGIHVQQSRNVIIKSSSIKTG------------------DDCISIGPGTNNLWIERVTCGPGH-GISIGSLAKDL-DE 258 (396)
Q Consensus 199 ~~DGi~~~~s~nv~I~n~~i~~~------------------dD~i~i~~~~~ni~i~n~~~~~~~-gi~igs~g~~~-~~ 258 (396)
..|+|.+..+++|.|++|.+..+ |..+.++.++++|+|++|.+...+ ++-+|+...+. ..
T Consensus 132 ~~DaI~i~~s~nVWIDH~s~s~~~~~d~~~~~~~G~~~~~~Dgl~Di~~~s~~VTiS~n~f~~h~k~~LiG~sd~~~~~d 211 (355)
T 1pcl_A 132 EWDAAVIDNSTNVWVDHVTISDGSFTDDKYTTKDGEKYVQHDGALDIKKGSDYVTISYSRFELHDKTILIGHSDSNGSQD 211 (355)
T ss_pred cCceEEecCCCcEEEEeeEEeccccCccccccccCccccccccceeeecCCCcEEEEeeEEcCCCceEEeCCCCCCcccc
Confidence 46889998899999999999863 555667777899999999997643 46666642211 11
Q ss_pred CCEEEEEEEeeEEeCCc-cEEEEEeecCCCCceEEcEEEEee
Q 048431 259 EGVQNVTVFKTVFTGTT-NGLRIKSWARPSNGFVRGIRFIDA 299 (396)
Q Consensus 259 ~~~~ni~i~n~~~~~~~-~gi~i~~~~~~~~g~v~nI~~~ni 299 (396)
.+..+|++.++.+.+.. +.-+++ . +...+.|..|+|.
T Consensus 212 ~g~~~vT~hhN~f~~~~~R~PrvR---~-G~~Hv~NN~~~~~ 249 (355)
T 1pcl_A 212 SGKLRVTFHNNVFDRVTERAPRVR---F-GSIHAYNNVYLGD 249 (355)
T ss_pred cCcceEEEECcEEeCCcccCCcee---c-ceEEEEcceEEcc
Confidence 23458999999998742 222332 1 2244555555544
No 42
>3uw0_A Pectinesterase; right-handed beta-helix, carbohydrate esterase, hydrolase; 3.50A {Yersinia enterocolitica subsp}
Probab=98.84 E-value=1.1e-07 Score=91.28 Aligned_cols=150 Identities=15% Similarity=0.220 Sum_probs=84.3
Q ss_pred ccHHHHHHHHHHHhhcCCCc---EEEecCceEEEeceeecccCCCCcEEEEEee---EEEeeCCccccCCCcceEEEece
Q 048431 45 DSTQAFAKAWAAACASNESA---TIYVPKGRYLLGSVAFRSECKSPSITFLING---TLVAPTDYRVLGQANNWLSFEGV 118 (396)
Q Consensus 45 d~t~aiq~Ai~~a~~~~~g~---~v~iP~G~Y~~~~l~l~~~~~~~n~~l~~~G---~l~~~~~~~~~~~~~~~i~~~~~ 118 (396)
-+-..||+||+++ +.+. +|+|++|+|.- .+.+.. . +++|.++| ++..-.+..
T Consensus 42 g~f~TIq~Ai~aa---~~~~~~~~I~I~~G~Y~E-~v~I~k---~-~itl~G~g~~~TiIt~~~~~-------------- 99 (364)
T 3uw0_A 42 DEFSSINAALKSA---PKDDTPFIIFLKNGVYTE-RLEVAR---S-HVTLKGENRDGTVIGANTAA-------------- 99 (364)
T ss_dssp --CCCHHHHHHHS---CSSSSCEEEEECSEEECC-CEEECS---T-TEEEEESCTTTEEEEECCCT--------------
T ss_pred CCcccHHHHHhhc---ccCCCcEEEEEeCCEEEE-EEEEcC---C-eEEEEecCCCCeEEEccccc--------------
Confidence 3456699999876 3344 89999999963 344542 2 78888776 222111100
Q ss_pred eeEEEEceEEeCCCCCcccccccCCCCCCCCceEEEEEeecCeEEEEEEEecCCc------------------c--eEEE
Q 048431 119 SHVSIIGGALDAKGTSLWACKTAAGSNCPNGATTLSITKSNNIRINGLLSLNSQM------------------Y--HIVI 178 (396)
Q Consensus 119 ~nv~I~Gg~idg~g~~~w~~~~~~~~~~~~~p~~i~~~~~~nv~i~~~~i~~~~~------------------~--~i~~ 178 (396)
+.....+.. |. ..+...+. ...++++++|++|+|... . .+.+
T Consensus 100 -------~~~~~~g~~-~g---------t~~saTv~-V~a~~f~a~nitf~Nt~~~~~~~~~~~~~p~~~~~~QAvAl~v 161 (364)
T 3uw0_A 100 -------GMLNPQGEK-WG---------TSGSSTVL-VNAPNFTAENLTIRNDFDFPANKKKADTDPTKLKDTQAVALLL 161 (364)
T ss_dssp -------TSBCTTCSB-CC---------TTTCCSEE-ECSTTCEEEEEEEEECCCHHHHHHSCTTCTTCCSCCCCCSEEE
T ss_pred -------ccccccccc-cc---------ccCeeEEE-EECCCEEEEeeeeEcCCcccccccccccccccccCCccEEEEE
Confidence 000000000 00 00111233 357889999999988742 1 2433
Q ss_pred e-eeecEEEEeEEEEcCCCCCCCCCeeeeceeeEEEEecEEecCCceEEeCCCCccEEEEeeeEe
Q 048431 179 N-RCQDVLVEGAKIIAAGDSPNTDGIHVQQSRNVIIKSSSIKTGDDCISIGPGTNNLWIERVTCG 242 (396)
Q Consensus 179 ~-~~~nv~i~n~~i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~i~~~~~ni~i~n~~~~ 242 (396)
. ..+...+.+|+|.+ ..|.+......+..+++|+|...-|-|.-. -...+++|.+.
T Consensus 162 ~~~~D~~~f~~C~f~G-----~QDTLy~~~~gr~yf~~c~I~GtvDFIFG~---a~a~f~~c~i~ 218 (364)
T 3uw0_A 162 AENSDKARFKAVKLEG-----YQDTLYSKTGSRSYFSDCEISGHVDFIFGS---GITVFDNCNIV 218 (364)
T ss_dssp CTTCEEEEEEEEEEEC-----SBSCEEECTTCEEEEESCEEEESEEEEEES---SEEEEESCEEE
T ss_pred ecCCCeEEEEeeEEEe-----cccceEeCCCCCEEEEcCEEEcCCCEECCc---ceEEEEeeEEE
Confidence 3 46777788888876 345666553456777788887655544332 25777777764
No 43
>1gq8_A Pectinesterase; hydrolase, carboxylic ester hydrolase; 1.75A {Daucus carota} SCOP: b.80.1.5
Probab=98.67 E-value=4.7e-07 Score=85.45 Aligned_cols=199 Identities=16% Similarity=0.153 Sum_probs=122.8
Q ss_pred cHHHHHHHHHHHhhcCCCc----EEEecCceEEEeceeecccCCCCcEEEEEeeEEEeeCCccccCCCcceEEEeceeeE
Q 048431 46 STQAFAKAWAAACASNESA----TIYVPKGRYLLGSVAFRSECKSPSITFLINGTLVAPTDYRVLGQANNWLSFEGVSHV 121 (396)
Q Consensus 46 ~t~aiq~Ai~~a~~~~~g~----~v~iP~G~Y~~~~l~l~~~~~~~n~~l~~~G~l~~~~~~~~~~~~~~~i~~~~~~nv 121 (396)
+-..||+||+++ +.+. +|+|++|+|. ..+.++.. |. +++|.++|. +..
T Consensus 18 ~f~TIq~AI~aa---p~~~~~~~~I~I~~G~Y~-E~V~I~~~-k~-~Itl~G~g~----------------------~~t 69 (319)
T 1gq8_A 18 DYKTVSEAVAAA---PEDSKTRYVIRIKAGVYR-ENVDVPKK-KK-NIMFLGDGR----------------------TST 69 (319)
T ss_dssp SBSSHHHHHHHS---CSSCSSCEEEEECSEEEE-CCEEECTT-CC-SEEEEESCT----------------------TTE
T ss_pred CccCHHHHHHhc---cccCCceEEEEEcCCeEe-eeeeccCC-Cc-cEEEEEcCC----------------------Ccc
Confidence 445599999876 4455 8999999996 45556421 12 678877651 112
Q ss_pred EEEc-eE-EeCCCCCcccccccCCCCCCCCceEEEEEeecCeEEEEEEEecCCc------ceEEEeeeecEEEEeEEEEc
Q 048431 122 SIIG-GA-LDAKGTSLWACKTAAGSNCPNGATTLSITKSNNIRINGLLSLNSQM------YHIVINRCQDVLVEGAKIIA 193 (396)
Q Consensus 122 ~I~G-g~-idg~g~~~w~~~~~~~~~~~~~p~~i~~~~~~nv~i~~~~i~~~~~------~~i~~~~~~nv~i~n~~i~~ 193 (396)
.|.+ +. .++.+ . .+...+.+ ..++++++|++|+|... -.+.+ .++++.+.||+|.+
T Consensus 70 iI~~~~~~~~g~~-----t---------~~satv~v-~a~~f~~~nlt~~Nt~g~~~~qAvAl~v-~~d~~~f~~c~f~g 133 (319)
T 1gq8_A 70 IITASKNVQDGST-----T---------FNSATVAA-VGAGFLARDITFQNTAGAAKHQAVALRV-GSDLSAFYRCDILA 133 (319)
T ss_dssp EEEECCCTTTTCC-----T---------GGGCSEEE-CSTTCEEEEEEEEECCCGGGCCCCSEEE-CCTTEEEEEEEEEC
T ss_pred EEEecccccCCCC-----c---------cceEEEEE-ECCCEEEEEeEeEccCCCcCCceEEEEe-cCCcEEEEEeEECc
Confidence 2222 00 00000 0 01123444 48999999999998632 23554 57899999999997
Q ss_pred CCCCCCCCCeeeeceeeEEEEecEEecCCceEEeCCCCccEEEEeeeEeC-----C-ce-EEEeeccccCCCCCEEEEEE
Q 048431 194 AGDSPNTDGIHVQQSRNVIIKSSSIKTGDDCISIGPGTNNLWIERVTCGP-----G-HG-ISIGSLAKDLDEEGVQNVTV 266 (396)
Q Consensus 194 ~~~~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~i~~~~~ni~i~n~~~~~-----~-~g-i~igs~g~~~~~~~~~ni~i 266 (396)
..|++.....+ ..+++|.|...-|-|.-. ....+++|.+.. + .+ |.--+. ..........|
T Consensus 134 -----~QDTLy~~~~r-~~~~~c~I~G~vDFIfG~---~~a~f~~c~i~~~~~~~~~~~~itA~~r---~~~~~~~G~vf 201 (319)
T 1gq8_A 134 -----YQDSLYVHSNR-QFFINCFIAGTVDFIFGN---AAVVLQDCDIHARRPGSGQKNMVTAQGR---TDPNQNTGIVI 201 (319)
T ss_dssp -----STTCEEECSSE-EEEESCEEEESSSCEEES---CEEEEESCEEEECCCSTTCCEEEEEECC---CSTTCCCEEEE
T ss_pred -----cceeeeecCcc-EEEEecEEEeeeeEEecC---CcEEEEeeEEEEecCCCCCceEEEeCCC---CCCCCCceEEE
Confidence 45778777655 599999999877766532 358999998853 1 23 332111 12234567899
Q ss_pred EeeEEeCCcc--------EEEEEeecCCCCceEEcEEEEeeEeecC
Q 048431 267 FKTVFTGTTN--------GLRIKSWARPSNGFVRGIRFIDALMQNV 304 (396)
Q Consensus 267 ~n~~~~~~~~--------gi~i~~~~~~~~g~v~nI~~~ni~~~~~ 304 (396)
.||++..... ...+. +.-+....++|.+..|.+.
T Consensus 202 ~~c~i~~~~~~~~~~~~~~~yLG----RpW~~~sr~v~~~t~~~~~ 243 (319)
T 1gq8_A 202 QKSRIGATSDLQPVQSSFPTYLG----RPWKEYSRTVVMQSSITNV 243 (319)
T ss_dssp ESCEEEECTTTGGGGGGSCEEEE----CCSSTTCEEEEESCEECTT
T ss_pred ECCEEecCCCccccccceeEEec----ccCCCcceEEEEeccCCCc
Confidence 9999987542 23333 1223344688888888765
No 44
>1xg2_A Pectinesterase 1; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Solanum lycopersicum}
Probab=98.66 E-value=3.5e-07 Score=86.27 Aligned_cols=199 Identities=15% Similarity=0.163 Sum_probs=121.8
Q ss_pred cHHHHHHHHHHHhhcCCCc----EEEecCceEEEeceeecccCCCCcEEEEEeeEEEeeCCccccCCCcceEEEeceeeE
Q 048431 46 STQAFAKAWAAACASNESA----TIYVPKGRYLLGSVAFRSECKSPSITFLINGTLVAPTDYRVLGQANNWLSFEGVSHV 121 (396)
Q Consensus 46 ~t~aiq~Ai~~a~~~~~g~----~v~iP~G~Y~~~~l~l~~~~~~~n~~l~~~G~l~~~~~~~~~~~~~~~i~~~~~~nv 121 (396)
+-..||+||+++ +.+. +|+|++|+|. ..+.++.. |. +++|.++|. +..
T Consensus 14 ~f~TIq~AI~aa---p~~~~~~~~I~I~~G~Y~-E~V~I~~~-k~-~Itl~G~g~----------------------~~t 65 (317)
T 1xg2_A 14 DYQTLAEAVAAA---PDKSKTRYVIYVKRGTYK-ENVEVASN-KM-NLMIVGDGM----------------------YAT 65 (317)
T ss_dssp SBSSHHHHHHHS---CSSCSSCEEEEECSEEEE-CCEEECTT-SC-SEEEEESCT----------------------TTE
T ss_pred CcccHHHHHhhc---ccCCCceEEEEEcCCEEe-eeeecCCC-CC-cEEEEEcCC----------------------CCc
Confidence 344599999876 4455 8999999996 45556421 12 688877651 112
Q ss_pred EEEc-eE-EeCCCCCcccccccCCCCCCCCceEEEEEeecCeEEEEEEEecCCc------ceEEEeeeecEEEEeEEEEc
Q 048431 122 SIIG-GA-LDAKGTSLWACKTAAGSNCPNGATTLSITKSNNIRINGLLSLNSQM------YHIVINRCQDVLVEGAKIIA 193 (396)
Q Consensus 122 ~I~G-g~-idg~g~~~w~~~~~~~~~~~~~p~~i~~~~~~nv~i~~~~i~~~~~------~~i~~~~~~nv~i~n~~i~~ 193 (396)
.|.+ .. .++.+ . .+...+.+ ..++++++|++|+|... -.+.+ .++++.+.||+|.+
T Consensus 66 iI~~~~~~~~g~~-----t---------~~satv~v-~a~~f~~~~lt~~Nt~g~~~~qAvAl~v-~~d~~~f~~c~f~g 129 (317)
T 1xg2_A 66 TITGSLNVVDGST-----T---------FRSATLAA-VGQGFILQDICIQNTAGPAKDQAVALRV-GADMSVINRCRIDA 129 (317)
T ss_dssp EEEECCCTTTTCC-----S---------GGGCSEEE-CSTTCEEESCEEEECCCGGGCCCCSEEE-CCTTEEEESCEEEC
T ss_pred EEEecccccCCCc-----c---------cceeEEEE-ECCCEEEEEeEEecccCCccCceEEEEE-eCCcEEEEEeEeCc
Confidence 2222 00 00100 0 01123444 68899999999998632 23554 57889999999997
Q ss_pred CCCCCCCCCeeeeceeeEEEEecEEecCCceEEeCCCCccEEEEeeeEeC-----C-ce-EEEeeccccCCCCCEEEEEE
Q 048431 194 AGDSPNTDGIHVQQSRNVIIKSSSIKTGDDCISIGPGTNNLWIERVTCGP-----G-HG-ISIGSLAKDLDEEGVQNVTV 266 (396)
Q Consensus 194 ~~~~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~i~~~~~ni~i~n~~~~~-----~-~g-i~igs~g~~~~~~~~~ni~i 266 (396)
..|++.....+ -.+++|.|...-|-|.-. ....+++|.+.. + .+ +.--+. ..........|
T Consensus 130 -----~QDTLy~~~~r-~~~~~c~I~G~vDFIfG~---~~avf~~c~i~~~~~~~~~~~~itA~~r---~~~~~~~G~vf 197 (317)
T 1xg2_A 130 -----YQDTLYAHSQR-QFYRDSYVTGTVDFIFGN---AAVVFQKCQLVARKPGKYQQNMVTAQGR---TDPNQATGTSI 197 (317)
T ss_dssp -----STTCEEECSSE-EEEESCEEEESSSCEEEC---CEEEEESCEEEECCCSTTCCEEEEEECC---CCTTSCCEEEE
T ss_pred -----cccceeecCcc-EEEEeeEEEeceeEEcCC---ceEEEeeeEEEEeccCCCCccEEEecCc---CCCCCCcEEEE
Confidence 45777777655 488999999877766532 358999998853 1 23 332111 12234567899
Q ss_pred EeeEEeCCcc--------EEEEEeecCCCCceEEcEEEEeeEeecC
Q 048431 267 FKTVFTGTTN--------GLRIKSWARPSNGFVRGIRFIDALMQNV 304 (396)
Q Consensus 267 ~n~~~~~~~~--------gi~i~~~~~~~~g~v~nI~~~ni~~~~~ 304 (396)
.||++..... ...+. +.-+....++|.+..|.+.
T Consensus 198 ~~c~i~~~~~~~~~~~~~~~yLG----RpW~~~sr~v~~~t~~~~~ 239 (317)
T 1xg2_A 198 QFCNIIASSDLEPVLKEFPTYLG----RPWKEYSRTVVMESYLGGL 239 (317)
T ss_dssp ESCEEEECTTTGGGTTTSCEEEE----CCSSTTCEEEEESCEECTT
T ss_pred ECCEEecCCCccccccceeEEee----cccCCCceEEEEecccCCc
Confidence 9999986532 23333 1222334688888888765
No 45
>3zsc_A Pectate trisaccharide-lyase; hydrolase; HET: ADA AQA; 1.94A {Thermotoga maritima}
Probab=98.63 E-value=6.3e-06 Score=78.04 Aligned_cols=115 Identities=18% Similarity=0.152 Sum_probs=73.4
Q ss_pred eeecEEEEeEEEEcCC--C-----CCCCCCeeeeceeeEEEEecEEecCCc-eEEeCCCCccEEEEeeeEeCCc-eEEEe
Q 048431 180 RCQDVLVEGAKIIAAG--D-----SPNTDGIHVQQSRNVIIKSSSIKTGDD-CISIGPGTNNLWIERVTCGPGH-GISIG 250 (396)
Q Consensus 180 ~~~nv~i~n~~i~~~~--~-----~~~~DGi~~~~s~nv~I~n~~i~~~dD-~i~i~~~~~ni~i~n~~~~~~~-gi~ig 250 (396)
.++||.|+|++|+... + ....|+|.+..++||.|++|.+....| .+.++.++.+|+|++|.+.... ++-+|
T Consensus 89 ~a~NVIIrnl~i~~~~~~~~~~~~~~~~DaI~i~~s~nVWIDHcs~s~~~Dg~idi~~~s~~vTISnn~f~~h~k~~LiG 168 (340)
T 3zsc_A 89 DAQNVIIRNIHFEGFYMEDDPRGKKYDFDYINVENSHHIWIDHITFVNGNDGAVDIKKYSNYITVSWNKFVDHDKVSLVG 168 (340)
T ss_dssp SCEEEEEESCEEECCCCTTCTTSCSSCCCSEEEESCEEEEEESCEEESCSSCSEEEETTCEEEEEESCEEESCSBCCEEC
T ss_pred cCceEEEeCeEEECCccccCccCCcCCCCeEEEecCCcEEEEeeeeccCCccceEEecCCceEEEECcEeccCceeeEeC
Confidence 4455666666666431 1 126799999999999999999988644 5888877999999999998643 46666
Q ss_pred eccccC--CCCCEEEEEEEeeEEeCCc-cEEEEEeecCCCCceEEcEEEEe
Q 048431 251 SLAKDL--DEEGVQNVTVFKTVFTGTT-NGLRIKSWARPSNGFVRGIRFID 298 (396)
Q Consensus 251 s~g~~~--~~~~~~ni~i~n~~~~~~~-~gi~i~~~~~~~~g~v~nI~~~n 298 (396)
+..... ...+-.+|++.++.+.+.. +.-+++ . +...+-|..|.|
T Consensus 169 ~sd~~~~~~d~g~~~vT~hhN~f~~~~~R~Pr~r---~-G~~Hv~NN~~~n 215 (340)
T 3zsc_A 169 SSDKEDPEQAGQAYKVTYHHNYFKNLIQRMPRIR---F-GMAHVFNNFYSM 215 (340)
T ss_dssp CCTTSCHHHHHHSCEEEEESCEEESCCBCTTEEE---S-SEEEEESCEEEC
T ss_pred cCCCCccccccCCcEEEEECeEecCCCCCCCccc---C-CeEEEEccEEEC
Confidence 541100 0001248999999998752 222333 1 233455555555
No 46
>2qy1_A Pectate lyase II; GAG lyase; 1.90A {Xanthomonas campestris PV} PDB: 2qxz_A 2qx3_A
Probab=98.61 E-value=1.1e-06 Score=83.44 Aligned_cols=99 Identities=12% Similarity=0.170 Sum_probs=61.5
Q ss_pred eEEEe-eeecEEEEeEEEEcCCCCCCCCCeeee-----ceeeEEEEecEEecC------------CceEEeCCCCccEEE
Q 048431 175 HIVIN-RCQDVLVEGAKIIAAGDSPNTDGIHVQ-----QSRNVIIKSSSIKTG------------DDCISIGPGTNNLWI 236 (396)
Q Consensus 175 ~i~~~-~~~nv~i~n~~i~~~~~~~~~DGi~~~-----~s~nv~I~n~~i~~~------------dD~i~i~~~~~ni~i 236 (396)
++.+. .++||.|+|++|+........|+|.+. .++||.|++|.+..+ |..+.++.++.+|+|
T Consensus 87 gl~i~~~~~NVIIrnl~i~~~~~~~~~DaI~i~g~~~~~s~nVWIDH~s~s~~~~~~~~~~~~~~Dg~idi~~~s~~VTI 166 (330)
T 2qy1_A 87 GIRVVGNAHNVIIQNMTIGLLQGGEDADSISLEGNSSGEPSKIWVDHNTVFASLTKCSGAGDASFDGGIDMKKGVHHVTV 166 (330)
T ss_dssp EEEEESSCEEEEEESCEEESCSSGGGCCSEEEECBTTBCCEEEEEESCEEECCCCCCTTCTTCSSCCSEEEESSCEEEEE
T ss_pred eEEEeCCCCeEEEeCeEEeCCCCCCCCcceeeccccCcccccEEEEeEEEEccccccccCCcceeecccccccCcceEEE
Confidence 34444 456666666666653322356888887 488888888888532 445677777888888
Q ss_pred EeeeEeCCc-eEEEeeccccCCCCCEEEEEEEeeEEeCC
Q 048431 237 ERVTCGPGH-GISIGSLAKDLDEEGVQNVTVFKTVFTGT 274 (396)
Q Consensus 237 ~n~~~~~~~-gi~igs~g~~~~~~~~~ni~i~n~~~~~~ 274 (396)
++|.+...+ ++-+|+....... ...+|+|.++.+.+.
T Consensus 167 Snn~f~~h~k~~L~G~sd~~~~~-~~~~vT~h~N~f~~~ 204 (330)
T 2qy1_A 167 SYNYVYNYQKVALNGYSDSDTKN-SAARTTYHHNRFENV 204 (330)
T ss_dssp ESCEEEEEEECCEESSSTTCGGG-GGCEEEEESCEEEEE
T ss_pred EcceeccCCeEEEECCCCccccC-CCceEEEECcEEcCC
Confidence 888886432 3555553111101 124788888888663
No 47
>1pxz_A Major pollen allergen JUN A 1; parallel beta-helix, cedar pollen; 1.70A {Juniperus ashei} SCOP: b.80.1.1
Probab=98.57 E-value=1.3e-06 Score=83.46 Aligned_cols=116 Identities=15% Similarity=0.142 Sum_probs=72.1
Q ss_pred EEEEEeecCeEEEEEEEecCC-cceEEEeeeecEEEEeEEEEcCCCCCCCCCeeeeceeeEEEEecEEecCCceE-EeCC
Q 048431 152 TLSITKSNNIRINGLLSLNSQ-MYHIVINRCQDVLVEGAKIIAAGDSPNTDGIHVQQSRNVIIKSSSIKTGDDCI-SIGP 229 (396)
Q Consensus 152 ~i~~~~~~nv~i~~~~i~~~~-~~~i~~~~~~nv~i~n~~i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~~dD~i-~i~~ 229 (396)
.|.+..++||.|++++|++.. .+.-.+...+.-. .-.. .....|||.+..+++|.|++|.+....|++ .++.
T Consensus 107 gi~i~~a~NVIIrnl~i~~~~~~~~~~I~~~~~~~---~g~~---~~~~~DaI~i~~s~nVwIDHcs~s~~~Dg~id~~~ 180 (346)
T 1pxz_A 107 CLFMRKVSHVILHSLHIHGCNTSVLGDVLVSESIG---VEPV---HAQDGDAITMRNVTNAWIDHNSLSDCSDGLIDVTL 180 (346)
T ss_dssp CEEEESCEEEEEESCEEECCCCCCSEEEEEETTTE---EEEE---CCCCCCSEEEESCEEEEEESCEEECCSSEEEEEES
T ss_pred eEEEEccCCEEEEeeEEEeeccCCCceEEeccCcc---cccc---cCCCCCEEEEecCceEEEEeeEEecCCCCcEeecc
Confidence 355667778888888877652 1111010000000 0000 124679999999999999999999887776 5666
Q ss_pred CCccEEEEeeeEeCCc-eEEEeeccccCCCCCEEEEEEEeeEE-eCC
Q 048431 230 GTNNLWIERVTCGPGH-GISIGSLAKDLDEEGVQNVTVFKTVF-TGT 274 (396)
Q Consensus 230 ~~~ni~i~n~~~~~~~-gi~igs~g~~~~~~~~~ni~i~n~~~-~~~ 274 (396)
++++|+|++|.+..-+ ++-+|+..... .....+|++.++.+ .+.
T Consensus 181 ~s~~vTISnn~f~~H~k~~l~G~sd~~~-~d~~~~vT~~~N~f~~~~ 226 (346)
T 1pxz_A 181 GSTGITISNNHFFNHHKVMLLGHDDTYD-DDKSMKVTVAFNQFGPNA 226 (346)
T ss_dssp SCEEEEEESCEEESEEEEEEESCCSSCG-GGGGCEEEEESCEECSSE
T ss_pred CcceEEEEeeEEecCCceeEECCCCccc-cCCceEEEEEeeEEeCCc
Confidence 6899999999998533 56666642211 11235889999998 553
No 48
>2x3h_A K5 lyase, K5A lyase; bacteriophage, glycosaminoglycan; 1.60A {Enterobacteria phage k1-5}
Probab=98.52 E-value=7.4e-05 Score=67.98 Aligned_cols=230 Identities=13% Similarity=0.156 Sum_probs=144.0
Q ss_pred ccEEEeeccCccCCCCcccHHHHHHHHHHHhhcCCCcEEEecCceEEEeceeecccCCCCcEEEEEe--eEEEeeCCccc
Q 048431 28 STIYNVLRCGAKGNGITDSTQAFAKAWAAACASNESATIYVPKGRYLLGSVAFRSECKSPSITFLIN--GTLVAPTDYRV 105 (396)
Q Consensus 28 ~~~~~v~d~Ga~~dg~~d~t~aiq~Ai~~a~~~~~g~~v~iP~G~Y~~~~l~l~~~~~~~n~~l~~~--G~l~~~~~~~~ 105 (396)
+++..+++|||.++-.+||+++|.+.|+. ...|.+|+|+|....+.+. ...|++. |+|.-....
T Consensus 62 arvls~k~fga~~~~~~d~~~~~~~sl~s------~~~v~i~~gvf~ss~i~~~------~c~l~g~g~g~~~~~~~~-- 127 (542)
T 2x3h_A 62 ARVLTSKPFGAAGDATTDDTEVIAASLNS------QKAVTISDGVFSSSGINSN------YCNLDGRGSGVLSHRSST-- 127 (542)
T ss_dssp HHBCBSSCTTCCCBSSSCCHHHHHHHHTS------SSCEECCSEEEEECCEEES------CCEEECTTTEEEEECSSS--
T ss_pred heeeecccccccCCcccCcHHHHHhhhcc------cccEecccccccccccccc------cccccccCCceeeeecCC--
Confidence 56788899999999999999999999853 4679999999988766663 4567775 477654332
Q ss_pred cCCCcceEEEec-----eeeEEEEceEEeCCCCCcccccccCCCCCCCCceEEEEEeecCeEEEEEEEecCCcceEEEee
Q 048431 106 LGQANNWLSFEG-----VSHVSIIGGALDAKGTSLWACKTAAGSNCPNGATTLSITKSNNIRINGLLSLNSQMYHIVINR 180 (396)
Q Consensus 106 ~~~~~~~i~~~~-----~~nv~I~Gg~idg~g~~~w~~~~~~~~~~~~~p~~i~~~~~~nv~i~~~~i~~~~~~~i~~~~ 180 (396)
+..+.|.. ..+++|+| +.. ......+.+.|....+|+++++.+.|...-++.+..
T Consensus 128 ----gn~lvfn~p~~g~ls~~ti~~-----nk~-----------~ds~qg~qvs~~gg~dvsv~~i~fsn~~g~gfslia 187 (542)
T 2x3h_A 128 ----GNYLVFNNPRTGRLSNITVES-----NKA-----------TDTTQGQQVSLAGGSDVTVSDVNFSNVKGTGFSLIA 187 (542)
T ss_dssp ----SCCEEEESCEEEEEEEEEEEC-----CCS-----------STTCBCCSEEEESCEEEEEEEEEEEEECSBEEEEEE
T ss_pred ----CCEEEEeCCCCcceeeEEEec-----ccC-----------CccccceEEEecCCCcceEeeeeeeecCCCceeEEE
Confidence 22333332 46666665 211 011224468889999999999999987776666543
Q ss_pred e------ecEEEEeEEEEcCCCCCC-CCCee-eeceeeEEEEecEEecC--CceEEeCCCCccEEEEeeeEeCC-ceEEE
Q 048431 181 C------QDVLVEGAKIIAAGDSPN-TDGIH-VQQSRNVIIKSSSIKTG--DDCISIGPGTNNLWIERVTCGPG-HGISI 249 (396)
Q Consensus 181 ~------~nv~i~n~~i~~~~~~~~-~DGi~-~~~s~nv~I~n~~i~~~--dD~i~i~~~~~ni~i~n~~~~~~-~gi~i 249 (396)
- +...|++++=.-..++.| .-|.. ++++.|-+|++...++. -.++.++...+.-.+.|..=..+ |=..-
T Consensus 188 yp~~~~p~g~~i~~irg~y~g~a~nk~agcvl~dss~nslid~via~nypqfgavelk~~a~ynivsnvig~~cqhv~yn 267 (542)
T 2x3h_A 188 YPNDAPPDGLMIKGIRGSYSGYATNKAAGCVLADSSVNSLIDNVIAKNYPQFGAVELKGTASYNIVSNVIGADCQHVTYN 267 (542)
T ss_dssp ECSSSCCBSCEEEEEEEEECSCCTTCSEEEEEEESCBSCEEEEEEEESCCTTEEEEEETTCBSCEEEEEEEESCSEEEEE
T ss_pred cCCCCCCCceEEeccccceeccccccccceEEeccchhhhhhhhhhhcCCccceEEeecceeeehhhhhhhccceeEEEC
Confidence 2 356777777664444333 22443 46788999999988884 35677777544444555443333 33555
Q ss_pred eeccccCCCCCEEEEEEEeeEEeCCccEEEEEeecCCCCceEEcEEEE
Q 048431 250 GSLAKDLDEEGVQNVTVFKTVFTGTTNGLRIKSWARPSNGFVRGIRFI 297 (396)
Q Consensus 250 gs~g~~~~~~~~~ni~i~n~~~~~~~~gi~i~~~~~~~~g~v~nI~~~ 297 (396)
|.++.-. + .|-.|+.+--.+..++..+.. .+ .+..|.+|.++
T Consensus 268 gte~~~a---p-snn~i~~vmannpkyaavv~g-kg-s~nlisdvlvd 309 (542)
T 2x3h_A 268 GTEGPIA---P-SNNLIKGVMANNPKYAAVVAG-KG-STNLISDVLVD 309 (542)
T ss_dssp ECSSSCC---C-CSCEEEEEEEESCSSEEEECC-SC-BSCEEEEEEEE
T ss_pred CccCCcC---C-ccchhhHhhcCCCceEEEEEe-cC-ccceehheeee
Confidence 6664322 2 233445554455555544432 12 44566666653
No 49
>3vmv_A Pectate lyase; polysaccharide lyase family 1, beta-helix, pectolytic, polygalacturonate; 1.54A {Bacillus} PDB: 3vmw_A*
Probab=98.51 E-value=5e-06 Score=78.41 Aligned_cols=140 Identities=12% Similarity=0.143 Sum_probs=88.1
Q ss_pred EEEeeeecEEEEeEEEEcCCCCCCCCCeeeec-eeeEEEEecEEec----------CCceEEeCCCCccEEEEeeeEeCC
Q 048431 176 IVINRCQDVLVEGAKIIAAGDSPNTDGIHVQQ-SRNVIIKSSSIKT----------GDDCISIGPGTNNLWIERVTCGPG 244 (396)
Q Consensus 176 i~~~~~~nv~i~n~~i~~~~~~~~~DGi~~~~-s~nv~I~n~~i~~----------~dD~i~i~~~~~ni~i~n~~~~~~ 244 (396)
+.+..++||.|+|++|+... ....|+|.+.. +++|.|++|.+.. .|..+.++.++.+|+|++|.|..-
T Consensus 97 l~i~~a~NVIIrNl~i~~~~-~~~~DaI~i~~~s~nVWIDH~s~s~~~~g~~~~~~~Dgl~di~~~s~~VTISnn~f~~h 175 (326)
T 3vmv_A 97 IRLSNAHNIIIQNVSIHHVR-EGEGTAIEVTDDSKNVWIDHNEFYSEFPGNGDSDYYDGLVDMKRNAEYITVSWNKFENH 175 (326)
T ss_dssp EEEESEEEEEEESCEEECCC-STTSCSEEEETTCEEEEEESCEEECCSSTTSCTTSSCCSEEECTTCEEEEEESCEEEEE
T ss_pred EEEEecceEEEECeEEEcCC-CCCCCeEEEecCCCcEEEEeeEEeccccCCcCccccCcceEecCCCceEEEEceEEecC
Confidence 34445567777777777543 24679999996 8999999999963 356688888899999999999753
Q ss_pred c-eEEEeeccccCCCCCEEEEEEEeeEEeCCc-cEEEEEeecCCCCceEEcEEEEeeEeecCCccEEEEeecCCCCCCCC
Q 048431 245 H-GISIGSLAKDLDEEGVQNVTVFKTVFTGTT-NGLRIKSWARPSNGFVRGIRFIDALMQNVQHPIIIDQNYCPHNLNCP 322 (396)
Q Consensus 245 ~-gi~igs~g~~~~~~~~~ni~i~n~~~~~~~-~gi~i~~~~~~~~g~v~nI~~~ni~~~~~~~~i~i~~~~~~~~~~~~ 322 (396)
+ ++-+|+..... ..-.+|++.++.+.+.. +.-+++ . +...+.|..|.|... +++....
T Consensus 176 ~k~~LiG~sd~~~--~~~~~vT~~~N~f~~~~~R~Pr~r---~-G~~Hv~NN~~~n~~~----~~~~~~~---------- 235 (326)
T 3vmv_A 176 WKTMLVGHTDNAS--LAPDKITYHHNYFNNLNSRVPLIR---Y-ADVHMFNNYFKDIND----TAINSRV---------- 235 (326)
T ss_dssp EECEEECSSSCGG--GCCEEEEEESCEEEEEEECTTEEE---S-CEEEEESCEEEEESS----CSEEEET----------
T ss_pred ceEEEECCCCCCc--ccCccEEEEeeEecCCcCcCCccc---C-CcEEEEccEEECCCc----eEEeecC----------
Confidence 2 46666642111 11258999999987631 111333 1 234555666665532 3333321
Q ss_pred CCCcceEEEeEEEEeE
Q 048431 323 GQISGVKISDVIYQDI 338 (396)
Q Consensus 323 ~~~~~~~i~nI~~~ni 338 (396)
.....+++-.|++.
T Consensus 236 --~a~v~~e~N~F~~~ 249 (326)
T 3vmv_A 236 --GARVFVENNYFDNV 249 (326)
T ss_dssp --TCEEEEESCEEEEE
T ss_pred --CcEEEEEceEEECC
Confidence 13457788888877
No 50
>1idk_A Pectin lyase A; signal, glycoprotein, multigene family; 1.93A {Aspergillus niger} SCOP: b.80.1.2 PDB: 1idj_A
Probab=98.50 E-value=4.6e-06 Score=79.90 Aligned_cols=114 Identities=12% Similarity=0.119 Sum_probs=74.5
Q ss_pred eEEEe-eeecEEEEeEEEEcC--CCCCCCCCeeeeceeeEEEEecEEec-CCceEEe-CCCCccEEEEeeeEeCC-----
Q 048431 175 HIVIN-RCQDVLVEGAKIIAA--GDSPNTDGIHVQQSRNVIIKSSSIKT-GDDCISI-GPGTNNLWIERVTCGPG----- 244 (396)
Q Consensus 175 ~i~~~-~~~nv~i~n~~i~~~--~~~~~~DGi~~~~s~nv~I~n~~i~~-~dD~i~i-~~~~~ni~i~n~~~~~~----- 244 (396)
++.+. .++||.|+|++|+.. ...+..|+|.+..+++|.|++|.+.. +|..+.. ..++++|+|++|.+...
T Consensus 125 gl~i~~~a~NVIIrnL~i~~~~~~~~~g~DaI~i~~s~nVwIDHcs~s~~~d~~~~~g~~~s~~VTISnn~f~~~~~~s~ 204 (359)
T 1idk_A 125 GLRIVSGAENIIIQNIAVTDINPKYVWGGDAITLDDCDLVWIDHVTTARIGRQHYVLGTSADNRVSLTNNYIDGVSDYSA 204 (359)
T ss_dssp CEEECTTCEEEEEESCEEEEECTTEETSCCSEEECSCEEEEEESCEEEEESSCSEEECCCTTCEEEEESCEEECBCSCBT
T ss_pred eEEEecCCCcEEEeCeEEEcccccccccCCceeecCCCcEEEEeeEeecCCCCcEEecccCcceEEEECcEecCCccccc
Confidence 35555 567888888888863 11246799999999999999999986 5555654 45689999999999642
Q ss_pred -----c--eEEE-eeccccCCCCCEEEEEEEeeEEeCCc-cEEEEEeecCCCCceEEcEEEEeeE
Q 048431 245 -----H--GISI-GSLAKDLDEEGVQNVTVFKTVFTGTT-NGLRIKSWARPSNGFVRGIRFIDAL 300 (396)
Q Consensus 245 -----~--gi~i-gs~g~~~~~~~~~ni~i~n~~~~~~~-~gi~i~~~~~~~~g~v~nI~~~ni~ 300 (396)
| +..+ |+ -.+++|.++.+.+.. +.-++. ......+.|..|.|..
T Consensus 205 ~~~G~h~~~~~L~G~---------sd~vT~hhN~f~~~~~R~Pr~r---~g~~~hv~NN~~~n~~ 257 (359)
T 1idk_A 205 TCDGYHYWAIYLDGD---------ADLVTMKGNYIYHTSGRSPKVQ---DNTLLHAVNNYWYDIS 257 (359)
T ss_dssp TSSSBBSCCEEECCS---------SCEEEEESCEEESBCSCTTEEC---TTCEEEEESCEEEEEE
T ss_pred ccCccccceEEEEec---------CCCeEEEceEeecCcccCcccc---CCceEEEECCEEeccc
Confidence 1 2333 22 138999999998642 111221 1012456666666654
No 51
>1pe9_A Pectate lyase A; parallel beta helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1ooc_A 1jta_A 1jrg_A
Probab=98.41 E-value=3.2e-06 Score=80.90 Aligned_cols=95 Identities=21% Similarity=0.353 Sum_probs=64.3
Q ss_pred eeecEEEEeEEEEcCCCC-----------CCCCCeeeec-eeeEEEEecEEecC------------------CceEEeCC
Q 048431 180 RCQDVLVEGAKIIAAGDS-----------PNTDGIHVQQ-SRNVIIKSSSIKTG------------------DDCISIGP 229 (396)
Q Consensus 180 ~~~nv~i~n~~i~~~~~~-----------~~~DGi~~~~-s~nv~I~n~~i~~~------------------dD~i~i~~ 229 (396)
.++||.|+|++|+...+. ...|+|.+.. ++||.|++|.+..+ |..+.++.
T Consensus 112 ~~~NVIIrNl~i~~~~d~~p~~~~~~g~~~~~DaI~i~~~s~nVWIDHcs~s~~~~~~~~~~~~~G~~~~~~DgllDi~~ 191 (361)
T 1pe9_A 112 GTNNVIIRNVYIQTPIDVEPHYEKGDGWNAEWDAMNITNGAHHVWIDHVTISDGNFTDDMYTTKDGETYVQHDGALDIKR 191 (361)
T ss_dssp TCEEEEEESCEEECCCCSSCEEETTTEEECCCCSEEEETTCEEEEEESCEEECTTSCGGGCCEETTEECCCCCCSEEECT
T ss_pred CCceEEEeCeEEEcCcccccccccccCcccCCceEEeecCCceEEEEccEeecccccccccccccCcceeeccceeeeec
Confidence 445666666666543210 2478999998 99999999999863 66688888
Q ss_pred CCccEEEEeeeEeCCc-eEEEeeccccC-CCCCEEEEEEEeeEEeCC
Q 048431 230 GTNNLWIERVTCGPGH-GISIGSLAKDL-DEEGVQNVTVFKTVFTGT 274 (396)
Q Consensus 230 ~~~ni~i~n~~~~~~~-gi~igs~g~~~-~~~~~~ni~i~n~~~~~~ 274 (396)
++.+|+|++|.|..-. ++-+|+...+. .+.+-.+|++.++.+.+.
T Consensus 192 ~s~~VTiS~n~f~~h~k~~LiG~sd~~~~~d~g~~~vT~hhN~f~~~ 238 (361)
T 1pe9_A 192 GSDYVTISNSLIDQHDKTMLIGHSDSNGSQDKGKLHVTLFNNVFNRV 238 (361)
T ss_dssp TCEEEEEESCEEEEEEECEEESCCTTCHHHHTTCCEEEEESCEEEEE
T ss_pred CCCcEEEEeeEEcCCCceeEecCCCCCcccccCcceEEEECeEEcCc
Confidence 8999999999997532 45566541110 011234799999998753
No 52
>1pxz_A Major pollen allergen JUN A 1; parallel beta-helix, cedar pollen; 1.70A {Juniperus ashei} SCOP: b.80.1.1
Probab=98.35 E-value=3.8e-06 Score=80.13 Aligned_cols=133 Identities=14% Similarity=0.159 Sum_probs=79.3
Q ss_pred ecCeEEEEEE----EecCCcceEEEeeeecEEEEeEEEEcCCCCCCCCCeeeeceeeEEEEecEEecCCceEEeCCCCcc
Q 048431 158 SNNIRINGLL----SLNSQMYHIVINRCQDVLVEGAKIIAAGDSPNTDGIHVQQSRNVIIKSSSIKTGDDCISIGPGTNN 233 (396)
Q Consensus 158 ~~nv~i~~~~----i~~~~~~~i~~~~~~nv~i~n~~i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~i~~~~~n 233 (396)
.++++|.+.. |.. ...++.+..++||.|+|++|+.... ...+ ++...+.-. ....-...+|+|.+.. ++|
T Consensus 87 ~sn~TI~G~ga~~~i~G-~G~gi~i~~a~NVIIrnl~i~~~~~--~~~~-~I~~~~~~~-~g~~~~~~~DaI~i~~-s~n 160 (346)
T 1pxz_A 87 AGHKTIDGRGADVHLGN-GGPCLFMRKVSHVILHSLHIHGCNT--SVLG-DVLVSESIG-VEPVHAQDGDAITMRN-VTN 160 (346)
T ss_dssp CSSEEEECTTSCEEEET-TSCCEEEESCEEEEEESCEEECCCC--CCSE-EEEEETTTE-EEEECCCCCCSEEEES-CEE
T ss_pred cCCeEEEccCCceEEeC-CcceEEEEccCCEEEEeeEEEeecc--CCCc-eEEeccCcc-cccccCCCCCEEEEec-Cce
Confidence 4577777742 221 1357888889999999999986421 1111 000000000 0011224678999986 899
Q ss_pred EEEEeeeEeCC-ce-EEEeeccccCCCCCEEEEEEEeeEEeCCccEEEEEeecCCCCceEEcEEEEeeEe-ecC
Q 048431 234 LWIERVTCGPG-HG-ISIGSLAKDLDEEGVQNVTVFKTVFTGTTNGLRIKSWARPSNGFVRGIRFIDALM-QNV 304 (396)
Q Consensus 234 i~i~n~~~~~~-~g-i~igs~g~~~~~~~~~ni~i~n~~~~~~~~gi~i~~~~~~~~g~v~nI~~~ni~~-~~~ 304 (396)
|.|++|++..+ +| +.+. ....+|+|+||.|.+...++.+.+..........+|||.+..+ ++.
T Consensus 161 VwIDHcs~s~~~Dg~id~~--------~~s~~vTISnn~f~~H~k~~l~G~sd~~~~d~~~~vT~~~N~f~~~~ 226 (346)
T 1pxz_A 161 AWIDHNSLSDCSDGLIDVT--------LGSTGITISNNHFFNHHKVMLLGHDDTYDDDKSMKVTVAFNQFGPNA 226 (346)
T ss_dssp EEEESCEEECCSSEEEEEE--------SSCEEEEEESCEEESEEEEEEESCCSSCGGGGGCEEEEESCEECSSE
T ss_pred EEEEeeEEecCCCCcEeec--------cCcceEEEEeeEEecCCceeEECCCCccccCCceEEEEEeeEEeCCc
Confidence 99999999865 46 3452 2457999999999998777777543210001123567777766 443
No 53
>2nsp_A Pectinesterase A; michaelis complex, hydrolase; HET: M8C ADA; 1.70A {Erwinia chrysanthemi} PDB: 2nst_A* 2nt6_A* 2nt9_A* 2ntp_A* 2ntb_A* 2ntq_A* 1qjv_A
Probab=98.34 E-value=2.3e-05 Score=74.57 Aligned_cols=176 Identities=13% Similarity=0.208 Sum_probs=100.1
Q ss_pred cHHHHHHHHHHHhhcCCCc---EEEecCceEEEeceeecccCCCCcEEEEEee---EEEeeCCccccCCCcceEEEecee
Q 048431 46 STQAFAKAWAAACASNESA---TIYVPKGRYLLGSVAFRSECKSPSITFLING---TLVAPTDYRVLGQANNWLSFEGVS 119 (396)
Q Consensus 46 ~t~aiq~Ai~~a~~~~~g~---~v~iP~G~Y~~~~l~l~~~~~~~n~~l~~~G---~l~~~~~~~~~~~~~~~i~~~~~~ 119 (396)
+-..||+||+++ +.+. +|+|++|+|.- .+.++. . +++|.++| ++..-.+..
T Consensus 17 ~f~TIq~Ai~aa---p~~~~~~~I~I~~G~Y~E-~V~I~k---~-~Itl~G~g~~~tiI~~~~~~--------------- 73 (342)
T 2nsp_A 17 TFKTIADAIASA---PAGSTPFVILIKNGVYNE-RLTITR---N-NLHLKGESRNGAVIAAATAA--------------- 73 (342)
T ss_dssp CBSSHHHHHHTS---CSSSSCEEEEECSEEEEC-CEEECS---T-TEEEEESCTTTEEEEECCCT---------------
T ss_pred CcchHHHHHHhc---ccCCCcEEEEEeCCEEEE-EEEEec---C-eEEEEecCCCCeEEEecccc---------------
Confidence 344599999865 3444 89999999974 455543 2 78888775 222111100
Q ss_pred eEEEEceEEeCCCCCcccccccCCCCCCCCceEEEEEeecCeEEEEEEEecCCc------------------ceEEE---
Q 048431 120 HVSIIGGALDAKGTSLWACKTAAGSNCPNGATTLSITKSNNIRINGLLSLNSQM------------------YHIVI--- 178 (396)
Q Consensus 120 nv~I~Gg~idg~g~~~w~~~~~~~~~~~~~p~~i~~~~~~nv~i~~~~i~~~~~------------------~~i~~--- 178 (396)
+.....+.. |... +...+.+ .++++++++++|+|... ..+.+
T Consensus 74 ------~~~~~~g~~-~gT~---------~satv~v-~a~~f~a~nlt~~Nt~~~~~~~~~~~~~~~~~~~~QAvAl~v~ 136 (342)
T 2nsp_A 74 ------GTLKSDGSK-WGTA---------GSSTITI-SAKDFSAQSLTIRNDFDFPANQAKSDSDSSKIKDTQAVALYVT 136 (342)
T ss_dssp ------TCBCTTSCB-CHHH---------HTCSEEE-CSBSCEEEEEEEEECCCHHHHHHSCTTCTTCCSCCCCCSEEEC
T ss_pred ------cccccccCc-cccc---------ceeEEEE-ECCCEEEEeeEEEccccccccccccccCCccccCCceEEEEEe
Confidence 000000000 0000 0112333 47899999999988641 12222
Q ss_pred eeeecEEEEeEEEEcCCCCCCCCCeeeeceeeEEEEecEEecCCceEEeCCCCccEEEEeeeEeCC----------ce-E
Q 048431 179 NRCQDVLVEGAKIIAAGDSPNTDGIHVQQSRNVIIKSSSIKTGDDCISIGPGTNNLWIERVTCGPG----------HG-I 247 (396)
Q Consensus 179 ~~~~nv~i~n~~i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~i~~~~~ni~i~n~~~~~~----------~g-i 247 (396)
..++++.+.+|.|.+ ..|.+.... .+..++||.|...-|-|.-. -...+++|.+..- .| |
T Consensus 137 v~~d~~~f~~c~f~G-----~QDTLy~~~-gr~~~~~c~I~G~vDFIFG~---a~a~f~~c~i~~~~~~~~~~~~~~g~I 207 (342)
T 2nsp_A 137 KSGDRAYFKDVSLVG-----YQATLYVSG-GRSFFSDCRISGTVDFIFGD---GTALFNNCDLVSRYRADVKSGNVSGYL 207 (342)
T ss_dssp TTCBSEEEEEEEEEC-----STTCEEECS-SEEEEESCEEEESEEEEEES---SEEEEESCEEEECCCTTSCTTSCCEEE
T ss_pred eccCcEEEEeeEEec-----ccceEEECC-CCEEEEcCEEEeceEEEeCC---ceEEEecCEEEEecCcccccccCceEE
Confidence 357888888888886 346666654 46788888888766644322 2588888877421 03 3
Q ss_pred EEeeccccCCCCCEEEEEEEeeEEeCC
Q 048431 248 SIGSLAKDLDEEGVQNVTVFKTVFTGT 274 (396)
Q Consensus 248 ~igs~g~~~~~~~~~ni~i~n~~~~~~ 274 (396)
.-.+. ....-..+.|.||++...
T Consensus 208 tA~~~----~~~~~~G~vf~~c~i~~~ 230 (342)
T 2nsp_A 208 TAPST----NINQKYGLVITNSRVIRE 230 (342)
T ss_dssp EEECC----BTTCSCCEEEESCEEEES
T ss_pred EccCC----CCCCCCEEEEEcCEEecC
Confidence 22221 112234578888888764
No 54
>1air_A Pectate lyase C, PELC; pectate cleavage, pectinolyitc activity, trans-elimination; 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1o88_A 1o8d_A 1o8e_A 1o8f_A 1o8g_A 1o8h_A 1o8i_A 1o8j_A 1o8k_A 1o8l_A 1o8m_A 1plu_A 2pec_A 2ewe_A*
Probab=98.32 E-value=6.6e-06 Score=78.61 Aligned_cols=119 Identities=17% Similarity=0.164 Sum_probs=77.4
Q ss_pred ceEEEeeeecEEEEeEEEEcCCC-CCCCCCeeeeceeeEEEEecEEecC--------------CceEEeCCCCccEEEEe
Q 048431 174 YHIVINRCQDVLVEGAKIIAAGD-SPNTDGIHVQQSRNVIIKSSSIKTG--------------DDCISIGPGTNNLWIER 238 (396)
Q Consensus 174 ~~i~~~~~~nv~i~n~~i~~~~~-~~~~DGi~~~~s~nv~I~n~~i~~~--------------dD~i~i~~~~~ni~i~n 238 (396)
.++.+..++||.|+|++|+..+. ....|+|.+..++||.|++|.+..+ |..+.++.++.+|+|++
T Consensus 103 ~gl~i~~~~NVIIrnl~i~~~~~~~~~~DaI~i~~s~nVWIDH~s~s~~~~~~~g~~~~~~~~DGl~di~~~s~~VTISn 182 (353)
T 1air_A 103 FGIWIKKSSDVVVQNMRIGYLPGGAKDGDMIRVDDSPNVWVDHNELFAANHECDGTPDNDTTFESAVDIKGASNTVTVSY 182 (353)
T ss_dssp SEEEEESCCSEEEESCEEESCSCGGGTCCSEEEESCCSEEEESCEEECCSCCCTTCGGGCCSSCCSEEEESSCCEEEEES
T ss_pred ceEEEeccCcEEEeccEEEeCCCCCCCCCeEEeeCCCcEEEEeeEEecCCcccccccccccccccceeeecccCcEEEEe
Confidence 45666677788888888875321 2467899999899999999998642 44567777789999999
Q ss_pred eeEeCCc-eEEEeeccccCCCCCEEEEEEEeeEEeCCc-cEEEEEeecCCCCceEEcEEEEeeE
Q 048431 239 VTCGPGH-GISIGSLAKDLDEEGVQNVTVFKTVFTGTT-NGLRIKSWARPSNGFVRGIRFIDAL 300 (396)
Q Consensus 239 ~~~~~~~-gi~igs~g~~~~~~~~~ni~i~n~~~~~~~-~gi~i~~~~~~~~g~v~nI~~~ni~ 300 (396)
|.+...+ +.-+|+...+ .. .+|+|.++.+.+.. +.-+++ . +...+.|..|.|..
T Consensus 183 n~f~~h~k~~LiG~sd~~---~g-~~vT~hhN~f~~~~~R~Pr~r---~-G~~Hv~NN~~~n~~ 238 (353)
T 1air_A 183 NYIHGVKKVGLDGSSSSD---TG-RNITYHHNYYNDVNARLPLQR---G-GLVHAYNNLYTNIT 238 (353)
T ss_dssp CEEEEEEECCEESSSTTC---CC-CEEEEESCEEEEEEECSCEEE---S-SEEEEESCEEEEES
T ss_pred eEEcCCCceeEECCCcCC---CC-ceEEEEceEEcCCcCCCCCCc---C-ceEEEEccEEECCC
Confidence 9997543 3445554211 12 68999999887632 112332 1 23345566666553
No 55
>1qcx_A Pectin lyase B; beta-helix protein, plant cell WALL; 1.70A {Aspergillus niger} SCOP: b.80.1.2
Probab=98.31 E-value=1.6e-05 Score=76.24 Aligned_cols=134 Identities=11% Similarity=0.094 Sum_probs=87.3
Q ss_pred EEEE-eecCeEEEEEEEecCC------cceEEEeeeecEEEEeEEEEcCCCCCCCCCee---eeceeeEEEEecEEecCC
Q 048431 153 LSIT-KSNNIRINGLLSLNSQ------MYHIVINRCQDVLVEGAKIIAAGDSPNTDGIH---VQQSRNVIIKSSSIKTGD 222 (396)
Q Consensus 153 i~~~-~~~nv~i~~~~i~~~~------~~~i~~~~~~nv~i~n~~i~~~~~~~~~DGi~---~~~s~nv~I~n~~i~~~d 222 (396)
|.+. .++||.|++++|++.. .+++.+..+++|.|++|++... .|+.. ...+++|+|++|.|....
T Consensus 126 l~i~~~a~NVIIrnl~i~~~~~~~~~~~DaI~i~~s~nvwIDHcs~s~~-----~d~~~~~~~~~s~~vTISnn~f~~~~ 200 (359)
T 1qcx_A 126 LRVVSGAKNVIIQNIAVTDINPKYVWGGDAITVDDSDLVWIDHVTTARI-----GRQHIVLGTSADNRVTISYSLIDGRS 200 (359)
T ss_dssp EEEETTCCCEEEESCEEEEECTTEETSCCSEEEESCCCEEEESCEEEEE-----SSCSEEECSSCCEEEEEESCEEECBC
T ss_pred EEEecCCCCEEEeCcEEEecCCcccccCceeEecCCceEEEEeeEeecc-----CcCceeecccccccEEEECcEecCCc
Confidence 6677 8899999999999742 3679999999999999999963 34432 336899999999997431
Q ss_pred -----------ceEEeCCCCccEEEEeeeEeCCce--EEEeeccccCCCCCEEEEEEEeeEEeCC-ccEEEEEeecCCCC
Q 048431 223 -----------DCISIGPGTNNLWIERVTCGPGHG--ISIGSLAKDLDEEGVQNVTVFKTVFTGT-TNGLRIKSWARPSN 288 (396)
Q Consensus 223 -----------D~i~i~~~~~ni~i~n~~~~~~~g--i~igs~g~~~~~~~~~ni~i~n~~~~~~-~~gi~i~~~~~~~~ 288 (396)
....+...+.++++.++.+....+ =.+ ..-..+++.|+.+.+. .+++... ..
T Consensus 201 ~~s~~~~G~H~~~~~l~G~sd~vT~~~N~f~~~~~R~Pr~---------r~~~~~hv~NN~~~n~~~~a~~~~-----~~ 266 (359)
T 1qcx_A 201 DYSATCNGHHYWGVYLDGSNDMVTLKGNYFYNLSGRMPKV---------QGNTLLHAVNNLFHNFDGHAFEIG-----TG 266 (359)
T ss_dssp SSBTTSSSBBSCCEEECCSSEEEEEESCEEESBCSCTTEE---------CSSEEEEEESCEEEEEEEEEEEEC-----TT
T ss_pred cccccCcccccceeEEecCCCCeehcccEeccCcccCcee---------cCCceEEEEccEEECccCeEEecC-----CC
Confidence 133333336789999998863211 111 0113688999998874 2344322 11
Q ss_pred ceEEcEEEEeeEeecCCccE
Q 048431 289 GFVRGIRFIDALMQNVQHPI 308 (396)
Q Consensus 289 g~v~nI~~~ni~~~~~~~~i 308 (396)
..|.+|+..+++...|+
T Consensus 267 ---~~i~~e~N~F~~~~~~~ 283 (359)
T 1qcx_A 267 ---GYVLAEGNVFQDVNVVV 283 (359)
T ss_dssp ---EEEEEESCEEEEEEEEE
T ss_pred ---ceEEEEeeEEECCCccc
Confidence 23555555555555553
No 56
>1vbl_A Pectate lyase 47; PL 47, thermostable, bacillus subtilis, pectin, calcium ION; 1.91A {Bacillus SP}
Probab=98.29 E-value=2.7e-06 Score=82.88 Aligned_cols=101 Identities=17% Similarity=0.271 Sum_probs=73.3
Q ss_pred ceEEEeeeecEEEEeEEEEcCCC---------------CCCCCCeeeeceeeEEEEecEEecC-----------------
Q 048431 174 YHIVINRCQDVLVEGAKIIAAGD---------------SPNTDGIHVQQSRNVIIKSSSIKTG----------------- 221 (396)
Q Consensus 174 ~~i~~~~~~nv~i~n~~i~~~~~---------------~~~~DGi~~~~s~nv~I~n~~i~~~----------------- 221 (396)
.++.+..++||.|+|++|+...+ ....|+|.+..++||.|++|.|..+
T Consensus 148 ~gl~i~~~~NVIIrNl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i~~s~nVWIDHcs~s~~~~~d~~~~~~~Gr~~~~ 227 (416)
T 1vbl_A 148 GGFLIKNVDNVIIRNIEFEAPLDYFPEWDPTDGTLGEWNSEYDSISIEGSSHIWIDHNTFTDGDHPDRSLGTYFGRPFQQ 227 (416)
T ss_dssp CEEEEESCEEEEEESCEEECCCCSSCEEETTSTTTCEEECCCCSEEEESCEEEEEESCEEECTTCCGGGSCEETTEECCC
T ss_pred CEEEeecCceEEEeCeEEEcCccccccccccccccccccCCCceEEecCCceEEEEccEEecCCCcccccccccCcceee
Confidence 45667778888888888886432 1256999999999999999999864
Q ss_pred -CceEEeCCCCccEEEEeeeEeCCc-eEEEeeccccCCCCCEEEEEEEeeEEeCC
Q 048431 222 -DDCISIGPGTNNLWIERVTCGPGH-GISIGSLAKDLDEEGVQNVTVFKTVFTGT 274 (396)
Q Consensus 222 -dD~i~i~~~~~ni~i~n~~~~~~~-gi~igs~g~~~~~~~~~ni~i~n~~~~~~ 274 (396)
|..+.++.++.+|+|++|.|...+ ++-+|+...+....+..+|+|.++.+.+.
T Consensus 228 ~DGl~Di~~~s~~VTISnn~f~~h~k~~LiG~sd~~~~d~g~~~VT~hhN~f~~~ 282 (416)
T 1vbl_A 228 HDGALDIKNSSDFITISYNVFTNHDKVTLIGASDSRMADSGHLRVTLHHNYYKNV 282 (416)
T ss_dssp CCCSEEEESSCEEEEEESCEEEEEEECCEECSCTTCGGGTTCCCEEEESCEEEEE
T ss_pred cccceeeecCCCcEEEEeeEEcCCCceeEeCCCCCCcccCCceEEEEECcEecCC
Confidence 556778878999999999997543 46666642211112234799999998763
No 57
>1air_A Pectate lyase C, PELC; pectate cleavage, pectinolyitc activity, trans-elimination; 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1o88_A 1o8d_A 1o8e_A 1o8f_A 1o8g_A 1o8h_A 1o8i_A 1o8j_A 1o8k_A 1o8l_A 1o8m_A 1plu_A 2pec_A 2ewe_A*
Probab=98.28 E-value=1.3e-05 Score=76.49 Aligned_cols=119 Identities=14% Similarity=0.128 Sum_probs=81.5
Q ss_pred EEEEEeecCeEEEEEEEecCC-----cceEEEeeeecEEEEeEEEEcCCCC--------CCCCCe-eee-ceeeEEEEec
Q 048431 152 TLSITKSNNIRINGLLSLNSQ-----MYHIVINRCQDVLVEGAKIIAAGDS--------PNTDGI-HVQ-QSRNVIIKSS 216 (396)
Q Consensus 152 ~i~~~~~~nv~i~~~~i~~~~-----~~~i~~~~~~nv~i~n~~i~~~~~~--------~~~DGi-~~~-~s~nv~I~n~ 216 (396)
.|.+..++||.|++++|+..+ .+.+.+..++||.|++|.+....+. ...||. ++. .+++|||++|
T Consensus 104 gl~i~~~~NVIIrnl~i~~~~~~~~~~DaI~i~~s~nVWIDH~s~s~~~~~~~g~~~~~~~~DGl~di~~~s~~VTISnn 183 (353)
T 1air_A 104 GIWIKKSSDVVVQNMRIGYLPGGAKDGDMIRVDDSPNVWVDHNELFAANHECDGTPDNDTTFESAVDIKGASNTVTVSYN 183 (353)
T ss_dssp EEEEESCCSEEEESCEEESCSCGGGTCCSEEEESCCSEEEESCEEECCSCCCTTCGGGCCSSCCSEEEESSCCEEEEESC
T ss_pred eEEEeccCcEEEeccEEEeCCCCCCCCCeEEeeCCCcEEEEeeEEecCCcccccccccccccccceeeecccCcEEEEee
Confidence 577889999999999999654 3679999999999999999853210 123654 553 6899999999
Q ss_pred EEecCCceEEeCCC----CccEEEEeeeEeCCc--eEEEeeccccCCCCCEEEEEEEeeEEeCC-ccEEEE
Q 048431 217 SIKTGDDCISIGPG----TNNLWIERVTCGPGH--GISIGSLAKDLDEEGVQNVTVFKTVFTGT-TNGLRI 280 (396)
Q Consensus 217 ~i~~~dD~i~i~~~----~~ni~i~n~~~~~~~--gi~igs~g~~~~~~~~~ni~i~n~~~~~~-~~gi~i 280 (396)
.|...+-+.-+++. ..+|++.++.+.... .=.+. .-.+++.|+.+.+. .+++..
T Consensus 184 ~f~~h~k~~LiG~sd~~~g~~vT~hhN~f~~~~~R~Pr~r----------~G~~Hv~NN~~~n~~~~~~~~ 244 (353)
T 1air_A 184 YIHGVKKVGLDGSSSSDTGRNITYHHNYYNDVNARLPLQR----------GGLVHAYNNLYTNITGSGLNV 244 (353)
T ss_dssp EEEEEEECCEESSSTTCCCCEEEEESCEEEEEEECSCEEE----------SSEEEEESCEEEEESSCSEEE
T ss_pred EEcCCCceeEECCCcCCCCceEEEEceEEcCCcCCCCCCc----------CceEEEEccEEECCCCceecc
Confidence 99865444334331 147999999885321 11111 01578889988873 345544
No 58
>2o04_A Pectate lyase, PL; hexasaccharide compound II, calciums; HET: ADA; 1.70A {Bacillus subtilis} PDB: 2nzm_A* 2o0v_A* 2o0w_A 2o17_A* 2o1d_A* 2bsp_A 1bn8_A 3krg_A*
Probab=98.11 E-value=9e-06 Score=78.84 Aligned_cols=100 Identities=15% Similarity=0.247 Sum_probs=72.7
Q ss_pred ceEEEeeeecEEEEeEEEEcCCC---------------CCCCCCeeeeceeeEEEEecEEecC-----------------
Q 048431 174 YHIVINRCQDVLVEGAKIIAAGD---------------SPNTDGIHVQQSRNVIIKSSSIKTG----------------- 221 (396)
Q Consensus 174 ~~i~~~~~~nv~i~n~~i~~~~~---------------~~~~DGi~~~~s~nv~I~n~~i~~~----------------- 221 (396)
.++.+.. +||.|+|++|+...+ ....|+|.+..++||.|++|.+..+
T Consensus 143 ~gl~i~~-~NVIIrnl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i~~s~nVWIDHcs~s~~~~~d~~~~~~~G~~~~~ 221 (399)
T 2o04_A 143 GNFQIKS-DNVIIRNIEFQDAYDYFPQWDPTDGSSGNWNSQYDNITINGGTHIWIDHCTFNDGSRPDSTSPKYYGRKYQH 221 (399)
T ss_dssp CEEEECS-EEEEEESCEEECCCCSSCEEETTSSTTCEEECCCCSEEEESCEEEEEESCEEECTTCCGGGSCEETTEECCC
T ss_pred CEEEeeC-CCEEEeCeEEecCccccccccccccccccccCCCCeEEecCCCcEEEEeeeeecCCCccccccccccceeec
Confidence 4566667 889999999986432 1356999999999999999999864
Q ss_pred -CceEEeCCCCccEEEEeeeEeCCc-eEEEeeccccCCCCCEEEEEEEeeEEeCC
Q 048431 222 -DDCISIGPGTNNLWIERVTCGPGH-GISIGSLAKDLDEEGVQNVTVFKTVFTGT 274 (396)
Q Consensus 222 -dD~i~i~~~~~ni~i~n~~~~~~~-gi~igs~g~~~~~~~~~ni~i~n~~~~~~ 274 (396)
|..+.++.++.+|+|++|.|...+ ++-+|+...+....+..+|+|.++.+.+.
T Consensus 222 ~Dgl~Di~~~s~~VTISnn~f~~h~k~~LiG~sd~~~~d~g~~~vT~h~N~f~~~ 276 (399)
T 2o04_A 222 HDGQTDASNGANYITMSYNYYHDHDKSSIFGSSDSKTSDDGKLKITLHHNRYKNI 276 (399)
T ss_dssp CCCSEEEETTCEEEEEESCEEEEEEECCEESCCTTCGGGTTCCCEEEESCEEEEE
T ss_pred cccceeeeccCCcEEEEeeEEcCCCceeEeCCCCCCccccCceeEEEECcEecCC
Confidence 556788888999999999997533 46666642211112235899999998753
No 59
>2inu_A Insulin fructotransferase; right-handed parallel beta-helix, lyase; 1.80A {Bacillus SP} PDB: 2inv_A*
Probab=98.01 E-value=0.00012 Score=70.34 Aligned_cols=123 Identities=10% Similarity=0.135 Sum_probs=92.5
Q ss_pred cCeEEEEEEEecC-----C------cceEEEee-eecEEEEeEEEEcCCCCCCCCCeeeeceeeEEEEecEEecCCceEE
Q 048431 159 NNIRINGLLSLNS-----Q------MYHIVINR-CQDVLVEGAKIIAAGDSPNTDGIHVQQSRNVIIKSSSIKTGDDCIS 226 (396)
Q Consensus 159 ~nv~i~~~~i~~~-----~------~~~i~~~~-~~nv~i~n~~i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~ 226 (396)
++|+|++++|++. . .-++.+.. .+++.|+++.+.. +.-||.+..+++.+|++++|.....||.
T Consensus 136 s~V~~~~v~I~G~~~~~~G~s~~~~dAGI~v~~~~d~~~I~nn~i~~-----~~fGI~l~~a~~~~I~~N~I~e~GNgI~ 210 (410)
T 2inu_A 136 SGIVFRDFCLDGVGFTPGKNSYHNGKTGIEVASDNDSFHITGMGFVY-----LEHALIVRGADALRVNDNMIAECGNCVE 210 (410)
T ss_dssp ECCEEESCEEECCCCSSSTTSCCCSCEEEEECSCEESCEEESCEEES-----CSEEEEETTEESCEEESCEEESSSEEEE
T ss_pred CCcEECCEEEECCEeecCCCCcccCceeEEEeccCCeEEEECCEEec-----ccEEEEEccCCCcEEECCEEEecCCcee
Confidence 5666666666655 2 23688875 8899999999997 4568999999999999999998788999
Q ss_pred eCCCCccEEEEeeeEeCC-ce--EEEeeccccCCCCCEEEEEEEeeEE-eCCccEEEEEeecCCCCceEEcEEEEe
Q 048431 227 IGPGTNNLWIERVTCGPG-HG--ISIGSLAKDLDEEGVQNVTVFKTVF-TGTTNGLRIKSWARPSNGFVRGIRFID 298 (396)
Q Consensus 227 i~~~~~ni~i~n~~~~~~-~g--i~igs~g~~~~~~~~~ni~i~n~~~-~~~~~gi~i~~~~~~~~g~v~nI~~~n 298 (396)
++..++...|+++.+..+ +| |.+. ...+.+|+++.+ ...++|+.+... ....+++.+|++
T Consensus 211 L~G~~~~~~I~~N~i~~~~dG~gIyl~---------ns~~~~I~~N~i~~~~R~gIh~m~s---~~~~i~~N~f~~ 274 (410)
T 2inu_A 211 LTGAGQATIVSGNHMGAGPDGVTLLAE---------NHEGLLVTGNNLFPRGRSLIEFTGC---NRCSVTSNRLQG 274 (410)
T ss_dssp ECSCEESCEEESCEEECCTTSEEEEEE---------SEESCEEESCEECSCSSEEEEEESC---BSCEEESCEEEE
T ss_pred eccccccceEecceeeecCCCCEEEEE---------eCCCCEEECCCcccCcceEEEEEcc---CCCEEECCEEec
Confidence 988778999999998754 34 6653 446788999977 558899988753 233444444443
No 60
>1qcx_A Pectin lyase B; beta-helix protein, plant cell WALL; 1.70A {Aspergillus niger} SCOP: b.80.1.2
Probab=98.00 E-value=4.4e-05 Score=73.12 Aligned_cols=116 Identities=16% Similarity=0.099 Sum_probs=79.5
Q ss_pred ceEEEe-eeecEEEEeEEEEcCCC--CCCCCCeeeeceeeEEEEecEEecC-CceEE-eCCCCccEEEEeeeEeCC----
Q 048431 174 YHIVIN-RCQDVLVEGAKIIAAGD--SPNTDGIHVQQSRNVIIKSSSIKTG-DDCIS-IGPGTNNLWIERVTCGPG---- 244 (396)
Q Consensus 174 ~~i~~~-~~~nv~i~n~~i~~~~~--~~~~DGi~~~~s~nv~I~n~~i~~~-dD~i~-i~~~~~ni~i~n~~~~~~---- 244 (396)
.++.+. .++||.|+|++|+.... .+..|||.+..+++|.|++|.+... |..+. ...++++|+|++|.+...
T Consensus 124 ~gl~i~~~a~NVIIrnl~i~~~~~~~~~~~DaI~i~~s~nvwIDHcs~s~~~d~~~~~~~~~s~~vTISnn~f~~~~~~s 203 (359)
T 1qcx_A 124 KGLRVVSGAKNVIIQNIAVTDINPKYVWGGDAITVDDSDLVWIDHVTTARIGRQHIVLGTSADNRVTISYSLIDGRSDYS 203 (359)
T ss_dssp CCEEEETTCCCEEEESCEEEEECTTEETSCCSEEEESCCCEEEESCEEEEESSCSEEECSSCCEEEEEESCEEECBCSSB
T ss_pred ceEEEecCCCCEEEeCcEEEecCCcccccCceeEecCCceEEEEeeEeeccCcCceeecccccccEEEECcEecCCcccc
Confidence 357776 78999999999997432 2467999999999999999999864 44443 355689999999999742
Q ss_pred ------c--eEEE-eeccccCCCCCEEEEEEEeeEEeCCcc-EEEEEeecCCCCceEEcEEEEeeEe
Q 048431 245 ------H--GISI-GSLAKDLDEEGVQNVTVFKTVFTGTTN-GLRIKSWARPSNGFVRGIRFIDALM 301 (396)
Q Consensus 245 ------~--gi~i-gs~g~~~~~~~~~ni~i~n~~~~~~~~-gi~i~~~~~~~~g~v~nI~~~ni~~ 301 (396)
| +..+ |+ -.++++.++.+.+... .-+++. + ....+.|..|.|...
T Consensus 204 ~~~~G~H~~~~~l~G~---------sd~vT~~~N~f~~~~~R~Pr~r~--~-~~~hv~NN~~~n~~~ 258 (359)
T 1qcx_A 204 ATCNGHHYWGVYLDGS---------NDMVTLKGNYFYNLSGRMPKVQG--N-TLLHAVNNLFHNFDG 258 (359)
T ss_dssp TTSSSBBSCCEEECCS---------SEEEEEESCEEESBCSCTTEECS--S-EEEEEESCEEEEEEE
T ss_pred ccCcccccceeEEecC---------CCCeehcccEeccCcccCceecC--C-ceEEEEccEEECccC
Confidence 3 2222 22 2489999999987422 112221 0 124567777777643
No 61
>3zsc_A Pectate trisaccharide-lyase; hydrolase; HET: ADA AQA; 1.94A {Thermotoga maritima}
Probab=97.97 E-value=0.00011 Score=69.42 Aligned_cols=104 Identities=13% Similarity=0.192 Sum_probs=73.8
Q ss_pred EEEEeecCeEEEEEEEecC-----------CcceEEEeeeecEEEEeEEEEcCCCCCCCCC-eeee-ceeeEEEEecEEe
Q 048431 153 LSITKSNNIRINGLLSLNS-----------QMYHIVINRCQDVLVEGAKIIAAGDSPNTDG-IHVQ-QSRNVIIKSSSIK 219 (396)
Q Consensus 153 i~~~~~~nv~i~~~~i~~~-----------~~~~i~~~~~~nv~i~n~~i~~~~~~~~~DG-i~~~-~s~nv~I~n~~i~ 219 (396)
|.+.+++||.|++++|++. ..+++.+..++||.|++|++... .|| +++. .+++|+|.+|.|.
T Consensus 85 i~I~~a~NVIIrnl~i~~~~~~~~~~~~~~~~DaI~i~~s~nVWIDHcs~s~~-----~Dg~idi~~~s~~vTISnn~f~ 159 (340)
T 3zsc_A 85 LVIKDAQNVIIRNIHFEGFYMEDDPRGKKYDFDYINVENSHHIWIDHITFVNG-----NDGAVDIKKYSNYITVSWNKFV 159 (340)
T ss_dssp EEEESCEEEEEESCEEECCCCTTCTTSCSSCCCSEEEESCEEEEEESCEEESC-----SSCSEEEETTCEEEEEESCEEE
T ss_pred eEEEcCceEEEeCeEEECCccccCccCCcCCCCeEEEecCCcEEEEeeeeccC-----CccceEEecCCceEEEECcEec
Confidence 4445567777777777653 34678888999999999999963 566 5665 5899999999999
Q ss_pred cCCceEEeCCCC----------ccEEEEeeeEeCCce----EEEeeccccCCCCCEEEEEEEeeEEeC
Q 048431 220 TGDDCISIGPGT----------NNLWIERVTCGPGHG----ISIGSLAKDLDEEGVQNVTVFKTVFTG 273 (396)
Q Consensus 220 ~~dD~i~i~~~~----------~ni~i~n~~~~~~~g----i~igs~g~~~~~~~~~ni~i~n~~~~~ 273 (396)
..+-+.-+++.. .+|++.++.+....+ +.. -.+++-|+.+.+
T Consensus 160 ~h~k~~LiG~sd~~~~~~d~g~~~vT~hhN~f~~~~~R~Pr~r~------------G~~Hv~NN~~~n 215 (340)
T 3zsc_A 160 DHDKVSLVGSSDKEDPEQAGQAYKVTYHHNYFKNLIQRMPRIRF------------GMAHVFNNFYSM 215 (340)
T ss_dssp SCSBCCEECCCTTSCHHHHHHSCEEEEESCEEESCCBCTTEEES------------SEEEEESCEEEC
T ss_pred cCceeeEeCcCCCCccccccCCcEEEEECeEecCCCCCCCcccC------------CeEEEEccEEEC
Confidence 766555555421 379999998864321 321 156888999988
No 62
>2o04_A Pectate lyase, PL; hexasaccharide compound II, calciums; HET: ADA; 1.70A {Bacillus subtilis} PDB: 2nzm_A* 2o0v_A* 2o0w_A 2o17_A* 2o1d_A* 2bsp_A 1bn8_A 3krg_A*
Probab=97.83 E-value=0.00035 Score=67.69 Aligned_cols=112 Identities=13% Similarity=0.197 Sum_probs=76.2
Q ss_pred EEEEEeecCeEEEEEEEecC-------------------CcceEEEeeeecEEEEeEEEEcCCCC------------CCC
Q 048431 152 TLSITKSNNIRINGLLSLNS-------------------QMYHIVINRCQDVLVEGAKIIAAGDS------------PNT 200 (396)
Q Consensus 152 ~i~~~~~~nv~i~~~~i~~~-------------------~~~~i~~~~~~nv~i~n~~i~~~~~~------------~~~ 200 (396)
.|.+.. +||.|++++|++. ..++|.+..++||.|++|++....+. .-.
T Consensus 144 gl~i~~-~NVIIrnl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i~~s~nVWIDHcs~s~~~~~d~~~~~~~G~~~~~~ 222 (399)
T 2o04_A 144 NFQIKS-DNVIIRNIEFQDAYDYFPQWDPTDGSSGNWNSQYDNITINGGTHIWIDHCTFNDGSRPDSTSPKYYGRKYQHH 222 (399)
T ss_dssp EEEECS-EEEEEESCEEECCCCSSCEEETTSSTTCEEECCCCSEEEESCEEEEEESCEEECTTCCGGGSCEETTEECCCC
T ss_pred EEEeeC-CCEEEeCeEEecCccccccccccccccccccCCCCeEEecCCCcEEEEeeeeecCCCccccccccccceeecc
Confidence 466666 8888888888753 23568889999999999999964210 124
Q ss_pred CCe-eee-ceeeEEEEecEEecCCceEEeCCC--------CccEEEEeeeEeCCc--eEEEeeccccCCCCCEEEEEEEe
Q 048431 201 DGI-HVQ-QSRNVIIKSSSIKTGDDCISIGPG--------TNNLWIERVTCGPGH--GISIGSLAKDLDEEGVQNVTVFK 268 (396)
Q Consensus 201 DGi-~~~-~s~nv~I~n~~i~~~dD~i~i~~~--------~~ni~i~n~~~~~~~--gi~igs~g~~~~~~~~~ni~i~n 268 (396)
||. ++. .+++|||.+|.|...+-+.-+++. -.+|++.++.+.+.. .=.+ .. -.+++.|
T Consensus 223 Dgl~Di~~~s~~VTISnn~f~~h~k~~LiG~sd~~~~d~g~~~vT~h~N~f~~~~~R~Pr~--------R~--G~~Hv~N 292 (399)
T 2o04_A 223 DGQTDASNGANYITMSYNYYHDHDKSSIFGSSDSKTSDDGKLKITLHHNRYKNIVQAAPRV--------RF--GQVHVYN 292 (399)
T ss_dssp CCSEEEETTCEEEEEESCEEEEEEECCEESCCTTCGGGTTCCCEEEESCEEEEEEECTTEE--------SS--CEEEEES
T ss_pred ccceeeeccCCcEEEEeeEEcCCCceeEeCCCCCCccccCceeEEEECcEecCCcccCCCc--------cc--ceEEEEc
Confidence 664 555 689999999999976555555542 127999999885321 1111 01 1488999
Q ss_pred eEEeCC
Q 048431 269 TVFTGT 274 (396)
Q Consensus 269 ~~~~~~ 274 (396)
+.+.+.
T Consensus 293 N~~~n~ 298 (399)
T 2o04_A 293 NYYEGS 298 (399)
T ss_dssp CEEECC
T ss_pred ceEECC
Confidence 999764
No 63
>1pcl_A Pectate lyase E; lyase (acting on polysaccharides); 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1
Probab=97.75 E-value=0.00066 Score=64.79 Aligned_cols=111 Identities=19% Similarity=0.249 Sum_probs=78.4
Q ss_pred EEEEEeecCeEEEEEEEecCC---------------cceEEEeeeecEEEEeEEEEcCCC---------CC---CCCCe-
Q 048431 152 TLSITKSNNIRINGLLSLNSQ---------------MYHIVINRCQDVLVEGAKIIAAGD---------SP---NTDGI- 203 (396)
Q Consensus 152 ~i~~~~~~nv~i~~~~i~~~~---------------~~~i~~~~~~nv~i~n~~i~~~~~---------~~---~~DGi- 203 (396)
.|.+..++||.|++++|++.. .+++.+..++||.|++|++....+ +. -.||.
T Consensus 97 gl~i~~~~NVIIrnl~i~~~~~~~p~~~~~~g~~~~~DaI~i~~s~nVWIDH~s~s~~~~~d~~~~~~~G~~~~~~Dgl~ 176 (355)
T 1pcl_A 97 SLVIKGVKNVILRNLYIETPVDVAPHYESGDGWNAEWDAAVIDNSTNVWVDHVTISDGSFTDDKYTTKDGEKYVQHDGAL 176 (355)
T ss_pred EEEEecCCeEEEeeeEEEcCcccccccccccCccccCceEEecCCCcEEEEeeEEeccccCccccccccCccccccccce
Confidence 466778999999999998531 357899999999999999996321 00 14663
Q ss_pred eee-ceeeEEEEecEEecCCceEEeCCC---------CccEEEEeeeEeCCc--e--EEEeeccccCCCCCEEEEEEEee
Q 048431 204 HVQ-QSRNVIIKSSSIKTGDDCISIGPG---------TNNLWIERVTCGPGH--G--ISIGSLAKDLDEEGVQNVTVFKT 269 (396)
Q Consensus 204 ~~~-~s~nv~I~n~~i~~~dD~i~i~~~---------~~ni~i~n~~~~~~~--g--i~igs~g~~~~~~~~~ni~i~n~ 269 (396)
++. .+++|||++|.|...+-+.-+++. ..+|++.+|.+.+.. . +.. -.+++.|+
T Consensus 177 Di~~~s~~VTiS~n~f~~h~k~~LiG~sd~~~~~d~g~~~vT~hhN~f~~~~~R~PrvR~------------G~~Hv~NN 244 (355)
T 1pcl_A 177 DIKKGSDYVTISYSRFELHDKTILIGHSDSNGSQDSGKLRVTFHNNVFDRVTERAPRVRF------------GSIHAYNN 244 (355)
T ss_pred eeecCCCcEEEEeeEEcCCCceEEeCCCCCCcccccCcceEEEECcEEeCCcccCCceec------------ceEEEEcc
Confidence 455 689999999999986666555542 126999999886432 1 221 13788899
Q ss_pred EEeCC
Q 048431 270 VFTGT 274 (396)
Q Consensus 270 ~~~~~ 274 (396)
.+.+.
T Consensus 245 ~~~~~ 249 (355)
T 1pcl_A 245 VYLGD 249 (355)
T ss_pred eEEcc
Confidence 88754
No 64
>1vbl_A Pectate lyase 47; PL 47, thermostable, bacillus subtilis, pectin, calcium ION; 1.91A {Bacillus SP}
Probab=97.59 E-value=0.00065 Score=66.12 Aligned_cols=113 Identities=12% Similarity=0.150 Sum_probs=78.5
Q ss_pred EEEEEeecCeEEEEEEEecC-------------------CcceEEEeeeecEEEEeEEEEcCCCC------------CCC
Q 048431 152 TLSITKSNNIRINGLLSLNS-------------------QMYHIVINRCQDVLVEGAKIIAAGDS------------PNT 200 (396)
Q Consensus 152 ~i~~~~~~nv~i~~~~i~~~-------------------~~~~i~~~~~~nv~i~n~~i~~~~~~------------~~~ 200 (396)
.|.+..++||.|++++|++. ..++|.+..++||.|++|++....+. .-.
T Consensus 149 gl~i~~~~NVIIrNl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i~~s~nVWIDHcs~s~~~~~d~~~~~~~Gr~~~~~ 228 (416)
T 1vbl_A 149 GFLIKNVDNVIIRNIEFEAPLDYFPEWDPTDGTLGEWNSEYDSISIEGSSHIWIDHNTFTDGDHPDRSLGTYFGRPFQQH 228 (416)
T ss_dssp EEEEESCEEEEEESCEEECCCCSSCEEETTSTTTCEEECCCCSEEEESCEEEEEESCEEECTTCCGGGSCEETTEECCCC
T ss_pred EEEeecCceEEEeCeEEEcCccccccccccccccccccCCCceEEecCCceEEEEccEEecCCCcccccccccCcceeec
Confidence 57777899999999999753 23578999999999999999964210 124
Q ss_pred CCe-eee-ceeeEEEEecEEecCCceEEeCCCC--------ccEEEEeeeEeCCc--eEEEeeccccCCCCCEEEEEEEe
Q 048431 201 DGI-HVQ-QSRNVIIKSSSIKTGDDCISIGPGT--------NNLWIERVTCGPGH--GISIGSLAKDLDEEGVQNVTVFK 268 (396)
Q Consensus 201 DGi-~~~-~s~nv~I~n~~i~~~dD~i~i~~~~--------~ni~i~n~~~~~~~--gi~igs~g~~~~~~~~~ni~i~n 268 (396)
||. ++. .+++|||.+|.|...+-+.-+++.. -+|++.++.+.+.. .=.+ .. -.+++.|
T Consensus 229 DGl~Di~~~s~~VTISnn~f~~h~k~~LiG~sd~~~~d~g~~~VT~hhN~f~~~~~R~Pr~--------R~--G~~Hv~N 298 (416)
T 1vbl_A 229 DGALDIKNSSDFITISYNVFTNHDKVTLIGASDSRMADSGHLRVTLHHNYYKNVTQRLPRV--------RF--GQVHIYN 298 (416)
T ss_dssp CCSEEEESSCEEEEEESCEEEEEEECCEECSCTTCGGGTTCCCEEEESCEEEEEEECSSEE--------SS--CEEEEES
T ss_pred ccceeeecCCCcEEEEeeEEcCCCceeEeCCCCCCcccCCceEEEEECcEecCCccCCccc--------cc--ceEEEEc
Confidence 664 455 6899999999999765555555421 25999999885321 1111 01 1488999
Q ss_pred eEEeCC
Q 048431 269 TVFTGT 274 (396)
Q Consensus 269 ~~~~~~ 274 (396)
+.+.+.
T Consensus 299 N~~~n~ 304 (416)
T 1vbl_A 299 NYYEFS 304 (416)
T ss_dssp CEEEEC
T ss_pred ceEECC
Confidence 999853
No 65
>1idk_A Pectin lyase A; signal, glycoprotein, multigene family; 1.93A {Aspergillus niger} SCOP: b.80.1.2 PDB: 1idj_A
Probab=97.58 E-value=0.00019 Score=68.65 Aligned_cols=135 Identities=12% Similarity=0.105 Sum_probs=87.7
Q ss_pred EEEE-eecCeEEEEEEEecC------CcceEEEeeeecEEEEeEEEEcCCCCCCCCCee---eeceeeEEEEecEEecCC
Q 048431 153 LSIT-KSNNIRINGLLSLNS------QMYHIVINRCQDVLVEGAKIIAAGDSPNTDGIH---VQQSRNVIIKSSSIKTGD 222 (396)
Q Consensus 153 i~~~-~~~nv~i~~~~i~~~------~~~~i~~~~~~nv~i~n~~i~~~~~~~~~DGi~---~~~s~nv~I~n~~i~~~d 222 (396)
|.+. .++||.|++++|++. ..++|.+..+++|.|++|++... .|++. ...+++|||++|.|...+
T Consensus 126 l~i~~~a~NVIIrnL~i~~~~~~~~~g~DaI~i~~s~nVwIDHcs~s~~-----~d~~~~~g~~~s~~VTISnn~f~~~~ 200 (359)
T 1idk_A 126 LRIVSGAENIIIQNIAVTDINPKYVWGGDAITLDDCDLVWIDHVTTARI-----GRQHYVLGTSADNRVSLTNNYIDGVS 200 (359)
T ss_dssp EEECTTCEEEEEESCEEEEECTTEETSCCSEEECSCEEEEEESCEEEEE-----SSCSEEECCCTTCEEEEESCEEECBC
T ss_pred EEEecCCCcEEEeCeEEEcccccccccCCceeecCCCcEEEEeeEeecC-----CCCcEEecccCcceEEEECcEecCCc
Confidence 6666 789999999999973 23679999999999999999963 34443 346899999999997432
Q ss_pred ---------c--eEEeCCCCccEEEEeeeEeCCce--EEEeeccccCCCCCEEEEEEEeeEEeCC-ccEEEEEeecCCCC
Q 048431 223 ---------D--CISIGPGTNNLWIERVTCGPGHG--ISIGSLAKDLDEEGVQNVTVFKTVFTGT-TNGLRIKSWARPSN 288 (396)
Q Consensus 223 ---------D--~i~i~~~~~ni~i~n~~~~~~~g--i~igs~g~~~~~~~~~ni~i~n~~~~~~-~~gi~i~~~~~~~~ 288 (396)
+ ...+...+.++++.++.+....+ =.+ ..-..+++.|+.+.+. .+++.+.. + .
T Consensus 201 ~~s~~~~G~h~~~~~L~G~sd~vT~hhN~f~~~~~R~Pr~---------r~g~~~hv~NN~~~n~~~~~i~~~~--~-~- 267 (359)
T 1idk_A 201 DYSATCDGYHYWAIYLDGDADLVTMKGNYIYHTSGRSPKV---------QDNTLLHAVNNYWYDISGHAFEIGE--G-G- 267 (359)
T ss_dssp SCBTTSSSBBSCCEEECCSSCEEEEESCEEESBCSCTTEE---------CTTCEEEEESCEEEEEEEEEEEECT--T-C-
T ss_pred ccccccCccccceEEEEecCCCeEEEceEeecCcccCccc---------cCCceEEEECCEEecccceEEeccC--C-c-
Confidence 1 23343336799999999864321 111 0112688899988873 34444321 1 2
Q ss_pred ceEEcEEEEeeEeecCCccEE
Q 048431 289 GFVRGIRFIDALMQNVQHPII 309 (396)
Q Consensus 289 g~v~nI~~~ni~~~~~~~~i~ 309 (396)
.+.+|+..+++...|+.
T Consensus 268 ----~i~~e~N~F~~~~~p~~ 284 (359)
T 1idk_A 268 ----YVLAEGNVFQNVDTVLE 284 (359)
T ss_dssp ----EEEEESCEEEEEEEEEE
T ss_pred ----EEEEEccEEECCCCcee
Confidence 24455555554444543
No 66
>1ru4_A Pectate lyase, PEL9A; parallel beta-helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.9
Probab=97.55 E-value=0.00031 Score=68.32 Aligned_cols=109 Identities=7% Similarity=0.016 Sum_probs=82.7
Q ss_pred EEEEEeecCeEEEEEEEecCCcceEEEeeeecEEEEeEEEEcCCCCCCCCCeeeece-eeEEEEecEEecC---------
Q 048431 152 TLSITKSNNIRINGLLSLNSQMYHIVINRCQDVLVEGAKIIAAGDSPNTDGIHVQQS-RNVIIKSSSIKTG--------- 221 (396)
Q Consensus 152 ~i~~~~~~nv~i~~~~i~~~~~~~i~~~~~~nv~i~n~~i~~~~~~~~~DGi~~~~s-~nv~I~n~~i~~~--------- 221 (396)
.+.+ ..++++|++++|++....++.+.. .+.+|++|+|... ...||.+... .+.+|+||.+...
T Consensus 109 ~i~i-~~~~~~i~gl~I~n~g~~GI~v~g-s~~~i~n~~i~~n----~~~GI~l~~~~s~n~I~nn~i~~N~d~~~~g~~ 182 (400)
T 1ru4_A 109 GFYV-TGDYWYFKGVEVTRAGYQGAYVIG-SHNTFENTAFHHN----RNTGLEINNGGSYNTVINSDAYRNYDPKKNGSM 182 (400)
T ss_dssp SEEE-CSSCEEEESEEEESCSSCSEEECS-SSCEEESCEEESC----SSCSEEECTTCCSCEEESCEEECCCCTTTTTSS
T ss_pred EEEE-ECCeEEEEeEEEEeCCCCcEEEeC-CCcEEEeEEEECC----CceeEEEEcccCCeEEEceEEEcccCccccCcc
Confidence 3555 689999999999988777888886 7889999999973 2349999864 4899999999764
Q ss_pred CceEEeCCC-CccEEEEeeeEeCC--ceEEEeeccccCCCCCEEEEEEEeeEEeCC
Q 048431 222 DDCISIGPG-TNNLWIERVTCGPG--HGISIGSLAKDLDEEGVQNVTVFKTVFTGT 274 (396)
Q Consensus 222 dD~i~i~~~-~~ni~i~n~~~~~~--~gi~igs~g~~~~~~~~~ni~i~n~~~~~~ 274 (396)
.|+++++.. .+..+|++|.++.. +|+.+.. ....++|+||...+.
T Consensus 183 ~dG~~~~~~~g~Gn~~~~~~~~~N~ddGidl~~--------~~~~v~i~nn~a~~N 230 (400)
T 1ru4_A 183 ADGFGPKQKQGPGNRFVGCRAWENSDDGFDLFD--------SPQKVVIENSWAFRN 230 (400)
T ss_dssp CCSEEECTTCCSCCEEESCEEESCSSCSEECTT--------CCSCCEEESCEEEST
T ss_pred cceEEEEecccCCeEEECCEEeecCCCcEEEEe--------cCCCEEEEeEEEECC
Confidence 267887642 47889999998743 5777631 123479999998765
No 67
>2qy1_A Pectate lyase II; GAG lyase; 1.90A {Xanthomonas campestris PV} PDB: 2qxz_A 2qx3_A
Probab=97.55 E-value=0.0005 Score=65.09 Aligned_cols=135 Identities=12% Similarity=0.130 Sum_probs=88.4
Q ss_pred EEEEE-eecCeEEEEEEEecCC----cceEEEe-----eeecEEEEeEEEEcCCC------CCCCCC-eeee-ceeeEEE
Q 048431 152 TLSIT-KSNNIRINGLLSLNSQ----MYHIVIN-----RCQDVLVEGAKIIAAGD------SPNTDG-IHVQ-QSRNVII 213 (396)
Q Consensus 152 ~i~~~-~~~nv~i~~~~i~~~~----~~~i~~~-----~~~nv~i~n~~i~~~~~------~~~~DG-i~~~-~s~nv~I 213 (396)
.|.+. .++||.|++++|++.. .+++.+. .++||.|++|++....+ ....|| +++. .+++|||
T Consensus 87 gl~i~~~~~NVIIrnl~i~~~~~~~~~DaI~i~g~~~~~s~nVWIDH~s~s~~~~~~~~~~~~~~Dg~idi~~~s~~VTI 166 (330)
T 2qy1_A 87 GIRVVGNAHNVIIQNMTIGLLQGGEDADSISLEGNSSGEPSKIWVDHNTVFASLTKCSGAGDASFDGGIDMKKGVHHVTV 166 (330)
T ss_dssp EEEEESSCEEEEEESCEEESCSSGGGCCSEEEECBTTBCCEEEEEESCEEECCCCCCTTCTTCSSCCSEEEESSCEEEEE
T ss_pred eEEEeCCCCeEEEeCeEEeCCCCCCCCcceeeccccCcccccEEEEeEEEEccccccccCCcceeecccccccCcceEEE
Confidence 57777 8999999999999864 5679998 59999999999974321 112255 4654 5899999
Q ss_pred EecEEecCCceEEeCCC-------CccEEEEeeeEeCCce--EEEeeccccCCCCCEEEEEEEeeEEeCC-ccEEEEEee
Q 048431 214 KSSSIKTGDDCISIGPG-------TNNLWIERVTCGPGHG--ISIGSLAKDLDEEGVQNVTVFKTVFTGT-TNGLRIKSW 283 (396)
Q Consensus 214 ~n~~i~~~dD~i~i~~~-------~~ni~i~n~~~~~~~g--i~igs~g~~~~~~~~~ni~i~n~~~~~~-~~gi~i~~~ 283 (396)
++|.|.+.+-+.-+++. ..+|++.++.+....+ =.+. .+ .+++.|+.+.+. .+++....
T Consensus 167 Snn~f~~h~k~~L~G~sd~~~~~~~~~vT~h~N~f~~~~~R~Pr~r--------~G--~~hv~NN~~~n~~~~~i~~~~- 235 (330)
T 2qy1_A 167 SYNYVYNYQKVALNGYSDSDTKNSAARTTYHHNRFENVESRVPLQR--------FG--LSHIYNNYFNNVTTSGINVRM- 235 (330)
T ss_dssp ESCEEEEEEECCEESSSTTCGGGGGCEEEEESCEEEEEEECTTEEE--------SS--EEEEESCEEEEECSCSEEEET-
T ss_pred EcceeccCCeEEEECCCCccccCCCceEEEECcEEcCCCCCCCcee--------cc--eEEEEeeEEEcccceEeccCC-
Confidence 99999876555555542 1589999998853211 1110 11 478889988874 45654432
Q ss_pred cCCCCceEEcEEEEee
Q 048431 284 ARPSNGFVRGIRFIDA 299 (396)
Q Consensus 284 ~~~~~g~v~nI~~~ni 299 (396)
+ ..-.+++..|++.
T Consensus 236 -~-~~i~~e~N~F~~~ 249 (330)
T 2qy1_A 236 -G-GIAKIESNYFENI 249 (330)
T ss_dssp -T-CEEEEESCEEEEE
T ss_pred -C-cEEEEEccEEECC
Confidence 1 2233444444443
No 68
>3vmv_A Pectate lyase; polysaccharide lyase family 1, beta-helix, pectolytic, polygalacturonate; 1.54A {Bacillus} PDB: 3vmw_A*
Probab=97.51 E-value=0.00075 Score=63.53 Aligned_cols=135 Identities=13% Similarity=0.186 Sum_probs=91.5
Q ss_pred EEEEEeecCeEEEEEEEecCC---cceEEEee-eecEEEEeEEEEcCC----CCCCCCCe-eee-ceeeEEEEecEEecC
Q 048431 152 TLSITKSNNIRINGLLSLNSQ---MYHIVINR-CQDVLVEGAKIIAAG----DSPNTDGI-HVQ-QSRNVIIKSSSIKTG 221 (396)
Q Consensus 152 ~i~~~~~~nv~i~~~~i~~~~---~~~i~~~~-~~nv~i~n~~i~~~~----~~~~~DGi-~~~-~s~nv~I~n~~i~~~ 221 (396)
.|.+..++||.|++++|++.. .+++.+.. ++||.|++|++...- +....||+ ++. .+++|||.+|.|...
T Consensus 96 gl~i~~a~NVIIrNl~i~~~~~~~~DaI~i~~~s~nVWIDH~s~s~~~~g~~~~~~~Dgl~di~~~s~~VTISnn~f~~h 175 (326)
T 3vmv_A 96 GIRLSNAHNIIIQNVSIHHVREGEGTAIEVTDDSKNVWIDHNEFYSEFPGNGDSDYYDGLVDMKRNAEYITVSWNKFENH 175 (326)
T ss_dssp CEEEESEEEEEEESCEEECCCSTTSCSEEEETTCEEEEEESCEEECCSSTTSCTTSSCCSEEECTTCEEEEEESCEEEEE
T ss_pred EEEEEecceEEEECeEEEcCCCCCCCeEEEecCCCcEEEEeeEEeccccCCcCccccCcceEecCCCceEEEEceEEecC
Confidence 366778999999999999864 56799996 999999999998421 11234654 554 489999999999976
Q ss_pred CceEEeCCC------CccEEEEeeeEeCCc--eEEEeeccccCCCCCEEEEEEEeeEEeCC-ccEEEEEeecCCCCceEE
Q 048431 222 DDCISIGPG------TNNLWIERVTCGPGH--GISIGSLAKDLDEEGVQNVTVFKTVFTGT-TNGLRIKSWARPSNGFVR 292 (396)
Q Consensus 222 dD~i~i~~~------~~ni~i~n~~~~~~~--gi~igs~g~~~~~~~~~ni~i~n~~~~~~-~~gi~i~~~~~~~~g~v~ 292 (396)
+-+.-+++. -.+|++.++.+.... .=.+. ...+++.|+.+.+. .+++.... + ..-.++
T Consensus 176 ~k~~LiG~sd~~~~~~~~vT~~~N~f~~~~~R~Pr~r----------~G~~Hv~NN~~~n~~~~~~~~~~--~-a~v~~e 242 (326)
T 3vmv_A 176 WKTMLVGHTDNASLAPDKITYHHNYFNNLNSRVPLIR----------YADVHMFNNYFKDINDTAINSRV--G-ARVFVE 242 (326)
T ss_dssp EECEEECSSSCGGGCCEEEEEESCEEEEEEECTTEEE----------SCEEEEESCEEEEESSCSEEEET--T-CEEEEE
T ss_pred ceEEEECCCCCCcccCccEEEEeeEecCCcCcCCccc----------CCcEEEEccEEECCCceEEeecC--C-cEEEEE
Confidence 555555552 136999999885321 11110 11578899998874 45655432 2 334566
Q ss_pred cEEEEee
Q 048431 293 GIRFIDA 299 (396)
Q Consensus 293 nI~~~ni 299 (396)
+..|++.
T Consensus 243 ~N~F~~~ 249 (326)
T 3vmv_A 243 NNYFDNV 249 (326)
T ss_dssp SCEEEEE
T ss_pred ceEEECC
Confidence 6666666
No 69
>3grh_A YBHC, acyl-COA thioester hydrolase YBGC; beta-helix, periplasmic, lipoprotein, outer membrane, carbohydrate esterase family 8; 1.70A {Escherichia coli k-12}
Probab=97.43 E-value=0.011 Score=57.20 Aligned_cols=138 Identities=9% Similarity=0.077 Sum_probs=76.0
Q ss_pred EEEeecCeEEEEEEEecCCcc--------eEEE-eeeecEEEEeEEEEcCCCCCCCCCeee-----------eceeeEEE
Q 048431 154 SITKSNNIRINGLLSLNSQMY--------HIVI-NRCQDVLVEGAKIIAAGDSPNTDGIHV-----------QQSRNVII 213 (396)
Q Consensus 154 ~~~~~~nv~i~~~~i~~~~~~--------~i~~-~~~~nv~i~n~~i~~~~~~~~~DGi~~-----------~~s~nv~I 213 (396)
.....+++.+++++|.|.... .+.+ ...+...+.+|.|.+..| -+.. ....+-.+
T Consensus 196 ~~V~g~~F~a~niTf~Ntag~~~~~~~~QAVAL~v~gDr~~fy~C~f~G~QD-----TLy~~~~~~~~~~~~d~~gRqyy 270 (422)
T 3grh_A 196 FWSQNNGLQLQNLTIENTLGDSVDAGNHPAVALRTDGDQVQINNVNILGRQN-----TFFVTNSGVQNRLETNRQPRTLV 270 (422)
T ss_dssp EEECCTTCEEEEEEEEETTGGGSCSSCCCCCSEEECCSSEEEEEEEEECSTT-----CEEECCCCTTCSCCSSCCCEEEE
T ss_pred EEEECCCEEEEeeEEEeCCCCCCCCCCCceEEEEecCCcEEEEeeEEEeecc-----eeeeccccccccccccccccEEE
Confidence 345578999999999886321 1222 255778888888886432 2222 12345677
Q ss_pred EecEEecCCceEEeCCCCccEEEEeeeEeCC------ce-EEEeeccccCCCCCEEEEEEEeeEEeCCc-cEEEEE-eec
Q 048431 214 KSSSIKTGDDCISIGPGTNNLWIERVTCGPG------HG-ISIGSLAKDLDEEGVQNVTVFKTVFTGTT-NGLRIK-SWA 284 (396)
Q Consensus 214 ~n~~i~~~dD~i~i~~~~~ni~i~n~~~~~~------~g-i~igs~g~~~~~~~~~ni~i~n~~~~~~~-~gi~i~-~~~ 284 (396)
++|.|...-|-|.-. -...+++|.+..- .| |.-.+. ....-..+.|.||++.... ....+. .|.
T Consensus 271 ~~CyIeGtVDFIFG~---a~AvFe~C~I~s~~~~~~~~g~ITA~~t----~~~~~~Gfvf~nC~ita~~~~~~yLGRPW~ 343 (422)
T 3grh_A 271 TNSYIEGDVDIVSGR---GAVVFDNTEFRVVNSRTQQEAYVFAPAT----LSNIYYGFLAVNSRFNAFGDGVAQLGRSLD 343 (422)
T ss_dssp ESCEEEESEEEEEES---SEEEEESCEEEECCSSCSSCCEEEEECC----BTTCCCCEEEESCEEEECSSSCBEEEEEEC
T ss_pred EecEEeccccEEccC---ceEEEEeeEEEEecCCCCCceEEEecCC----CCCCCCEEEEECCEEEeCCCCCEEcCCCCC
Confidence 888888765554432 3677888877421 23 333322 1223346678888887421 122333 232
Q ss_pred CCCCceEEcEEEEeeEeecC
Q 048431 285 RPSNGFVRGIRFIDALMQNV 304 (396)
Q Consensus 285 ~~~~g~v~nI~~~ni~~~~~ 304 (396)
. ..-..-.++|.|..|.+.
T Consensus 344 ~-ysrt~~qVVf~~s~l~~~ 362 (422)
T 3grh_A 344 V-DANTNGQVVIRDSAINEG 362 (422)
T ss_dssp C-STTBCCEEEEESCEECTT
T ss_pred C-cCCcCccEEEEeCcccCc
Confidence 1 111223477777777664
No 70
>1pe9_A Pectate lyase A; parallel beta helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1ooc_A 1jta_A 1jrg_A
Probab=97.08 E-value=0.0022 Score=61.27 Aligned_cols=114 Identities=19% Similarity=0.255 Sum_probs=74.2
Q ss_pred EEEE---EeecCeEEEEEEEecC---------------CcceEEEee-eecEEEEeEEEEcCCCC------------CCC
Q 048431 152 TLSI---TKSNNIRINGLLSLNS---------------QMYHIVINR-CQDVLVEGAKIIAAGDS------------PNT 200 (396)
Q Consensus 152 ~i~~---~~~~nv~i~~~~i~~~---------------~~~~i~~~~-~~nv~i~n~~i~~~~~~------------~~~ 200 (396)
.|.+ .+++||.|++++|++. ..++|.+.. ++||.|++|++....+. .-.
T Consensus 104 gl~i~~~~~~~NVIIrNl~i~~~~d~~p~~~~~~g~~~~~DaI~i~~~s~nVWIDHcs~s~~~~~~~~~~~~~G~~~~~~ 183 (361)
T 1pe9_A 104 SLIIDGTDGTNNVIIRNVYIQTPIDVEPHYEKGDGWNAEWDAMNITNGAHHVWIDHVTISDGNFTDDMYTTKDGETYVQH 183 (361)
T ss_dssp EEEEEGGGTCEEEEEESCEEECCCCSSCEEETTTEEECCCCSEEEETTCEEEEEESCEEECTTSCGGGCCEETTEECCCC
T ss_pred EEEEecCCCCceEEEeCeEEEcCcccccccccccCcccCCceEEeecCCceEEEEccEeecccccccccccccCcceeec
Confidence 3555 4677888888888753 135788998 99999999999963210 124
Q ss_pred CC-eeee-ceeeEEEEecEEecCCceEEeCCCC---------ccEEEEeeeEeCCceEEEeeccccCCCCCEEEEEEEee
Q 048431 201 DG-IHVQ-QSRNVIIKSSSIKTGDDCISIGPGT---------NNLWIERVTCGPGHGISIGSLAKDLDEEGVQNVTVFKT 269 (396)
Q Consensus 201 DG-i~~~-~s~nv~I~n~~i~~~dD~i~i~~~~---------~ni~i~n~~~~~~~gi~igs~g~~~~~~~~~ni~i~n~ 269 (396)
|| +++. .+++|||.+|.|...+-+.-+++.. -+|++.++.+.+... +.... .. -.+++.|+
T Consensus 184 DgllDi~~~s~~VTiS~n~f~~h~k~~LiG~sd~~~~~d~g~~~vT~hhN~f~~~~~-R~Pr~-----R~--G~~Hv~NN 255 (361)
T 1pe9_A 184 DGALDIKRGSDYVTISNSLIDQHDKTMLIGHSDSNGSQDKGKLHVTLFNNVFNRVTE-RAPRV-----RY--GSIHSFNN 255 (361)
T ss_dssp CCSEEECTTCEEEEEESCEEEEEEECEEESCCTTCHHHHTTCCEEEEESCEEEEEEE-CSSEE-----SS--CEEEEESC
T ss_pred cceeeeecCCCcEEEEeeEEcCCCceeEecCCCCCcccccCcceEEEECeEEcCccc-cCccc-----cc--ceEEEEcc
Confidence 66 4555 5899999999998755555555421 259999998853211 00000 01 14788999
Q ss_pred EEeC
Q 048431 270 VFTG 273 (396)
Q Consensus 270 ~~~~ 273 (396)
.+.+
T Consensus 256 ~~~~ 259 (361)
T 1pe9_A 256 VFKG 259 (361)
T ss_dssp EEEE
T ss_pred eEec
Confidence 9864
No 71
>3t9g_A Pectate lyase; PL3, parallel beta-helix; HET: GOL; 1.50A {Caldicellulosiruptor bescii}
Probab=96.53 E-value=0.22 Score=42.38 Aligned_cols=129 Identities=14% Similarity=0.182 Sum_probs=62.7
Q ss_pred cEEEEeEEEEcCCCCCCCCCeeeeceeeEEEEecEEec-CCceEEeCCCCccEEEEeeeEeCCce--EEEeeccccCCCC
Q 048431 183 DVLVEGAKIIAAGDSPNTDGIHVQQSRNVIIKSSSIKT-GDDCISIGPGTNNLWIERVTCGPGHG--ISIGSLAKDLDEE 259 (396)
Q Consensus 183 nv~i~n~~i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~-~dD~i~i~~~~~ni~i~n~~~~~~~g--i~igs~g~~~~~~ 259 (396)
..+++|+.|-. +..||||..+ +.+|+|+.... +.|++++++ ...++|.+.-...+.. +.. .
T Consensus 53 GaTLkNvIIG~----~~~dGIHC~G--~ctl~NVwwedVcEDA~T~kg-~g~~~I~GGgA~~A~DKV~Q~---------N 116 (196)
T 3t9g_A 53 GANLKNVIIGA----PGCDGIHCYG--DNVVENVVWEDVGEDALTVKS-EGVVEVIGGSAKEAADKVFQL---------N 116 (196)
T ss_dssp TCEEEEEEECS----CCTTCEEECS--SEEEEEEEESSCCSCSEEECS-SEEEEEESCEEEEEEEEEEEE---------C
T ss_pred CCEEEEEEECC----CCcCcEEEcC--CEeEEEEEeeeeeceeeEEcC-CCeEEEECCCccCCCceEEEE---------C
Confidence 44555555543 2456666643 35666666643 566666664 4455555554443322 222 1
Q ss_pred CEEEEEEEeeEEeCCccEEEEEeecCCCCceEEcEEEEeeEeecCCccEEEEeecCCCCCCCCCCCcceEEEeEEEEeEE
Q 048431 260 GVQNVTVFKTVFTGTTNGLRIKSWARPSNGFVRGIRFIDALMQNVQHPIIIDQNYCPHNLNCPGQISGVKISDVIYQDIR 339 (396)
Q Consensus 260 ~~~ni~i~n~~~~~~~~gi~i~~~~~~~~g~v~nI~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~nI~~~ni~ 339 (396)
+.-.+.|+|-+..+ .|--..+..+ -..-|+|.++|+++.+.+..+. +.+- +.....+.|+.+.|+.
T Consensus 117 g~Gtv~I~nF~~~~--~GKl~RSCGn--c~~~r~v~i~~v~~~n~k~~l~-rtdS---------~~~~~~~~n~~~~~~~ 182 (196)
T 3t9g_A 117 APCTFKVKNFTATN--IGKLVRQNGN--TTFKVVIYLEDVTLNNVKSCVA-KSDS---------PVSELWYHNLNVNNCK 182 (196)
T ss_dssp SSEEEEEEEEEEEE--EEEEEEECTT--CCSCEEEEEEEEEEEEEEEEEE-ECCC---------TTCEEEEEEEEEEEEE
T ss_pred CCceEEEeeEEEcc--CCEEEEcCCC--CCceeEEEEeCeEEeCCEEEEE-EcCC---------CCCEEEEecceecCCC
Confidence 11245555555543 2333333321 1233666677776666543322 2211 1245567777777766
Q ss_pred Ee
Q 048431 340 GT 341 (396)
Q Consensus 340 ~~ 341 (396)
-.
T Consensus 183 ~~ 184 (196)
T 3t9g_A 183 TL 184 (196)
T ss_dssp EE
T ss_pred cc
Confidence 43
No 72
>1gq8_A Pectinesterase; hydrolase, carboxylic ester hydrolase; 1.75A {Daucus carota} SCOP: b.80.1.5
Probab=96.49 E-value=0.041 Score=51.59 Aligned_cols=116 Identities=9% Similarity=0.046 Sum_probs=80.0
Q ss_pred EEEeeeecEEEEeEEEEcCCCC--CCCCCeeeeceeeEEEEecEEecCCceEEeCCCCccEEEEeeeEeCCceEEEeecc
Q 048431 176 IVINRCQDVLVEGAKIIAAGDS--PNTDGIHVQQSRNVIIKSSSIKTGDDCISIGPGTNNLWIERVTCGPGHGISIGSLA 253 (396)
Q Consensus 176 i~~~~~~nv~i~n~~i~~~~~~--~~~DGi~~~~s~nv~I~n~~i~~~dD~i~i~~~~~ni~i~n~~~~~~~gi~igs~g 253 (396)
+.+ ..++++++|++|.+.... ...-++.+. ++++.++||.|....|.+.... .+ ..+++|.+.+.-.+-+|..
T Consensus 89 v~v-~a~~f~~~nlt~~Nt~g~~~~qAvAl~v~-~d~~~f~~c~f~g~QDTLy~~~-~r-~~~~~c~I~G~vDFIfG~~- 163 (319)
T 1gq8_A 89 VAA-VGAGFLARDITFQNTAGAAKHQAVALRVG-SDLSAFYRCDILAYQDSLYVHS-NR-QFFINCFIAGTVDFIFGNA- 163 (319)
T ss_dssp EEE-CSTTCEEEEEEEEECCCGGGCCCCSEEEC-CTTEEEEEEEEECSTTCEEECS-SE-EEEESCEEEESSSCEEESC-
T ss_pred EEE-ECCCEEEEEeEeEccCCCcCCceEEEEec-CCcEEEEEeEECccceeeeecC-cc-EEEEecEEEeeeeEEecCC-
Confidence 444 478999999999986432 234466664 5889999999999989998876 33 5999999987666666542
Q ss_pred ccCCCCCEEEEEEEeeEEeCCcc----EEEEEeecCCCCceEEcEEEEeeEeecCC
Q 048431 254 KDLDEEGVQNVTVFKTVFTGTTN----GLRIKSWARPSNGFVRGIRFIDALMQNVQ 305 (396)
Q Consensus 254 ~~~~~~~~~ni~i~n~~~~~~~~----gi~i~~~~~~~~g~v~nI~~~ni~~~~~~ 305 (396)
...|+||++..... .-.|..........-...+|.|+++....
T Consensus 164 ---------~a~f~~c~i~~~~~~~~~~~~itA~~r~~~~~~~G~vf~~c~i~~~~ 210 (319)
T 1gq8_A 164 ---------AVVLQDCDIHARRPGSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATS 210 (319)
T ss_dssp ---------EEEEESCEEEECCCSTTCCEEEEEECCCSTTCCCEEEEESCEEEECT
T ss_pred ---------cEEEEeeEEEEecCCCCCceEEEeCCCCCCCCCceEEEECCEEecCC
Confidence 47899999875321 11233221112334456889999997654
No 73
>1xg2_A Pectinesterase 1; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Solanum lycopersicum}
Probab=96.39 E-value=0.041 Score=51.54 Aligned_cols=116 Identities=9% Similarity=0.061 Sum_probs=80.0
Q ss_pred EEEeeeecEEEEeEEEEcCCCC--CCCCCeeeeceeeEEEEecEEecCCceEEeCCCCccEEEEeeeEeCCceEEEeecc
Q 048431 176 IVINRCQDVLVEGAKIIAAGDS--PNTDGIHVQQSRNVIIKSSSIKTGDDCISIGPGTNNLWIERVTCGPGHGISIGSLA 253 (396)
Q Consensus 176 i~~~~~~nv~i~n~~i~~~~~~--~~~DGi~~~~s~nv~I~n~~i~~~dD~i~i~~~~~ni~i~n~~~~~~~gi~igs~g 253 (396)
+.+ .+++++++|++|.+.... ...-++.+. ++++.++||.|....|.+.... .+ -.+++|.+.+.-.+-+|..
T Consensus 85 v~v-~a~~f~~~~lt~~Nt~g~~~~qAvAl~v~-~d~~~f~~c~f~g~QDTLy~~~-~r-~~~~~c~I~G~vDFIfG~~- 159 (317)
T 1xg2_A 85 LAA-VGQGFILQDICIQNTAGPAKDQAVALRVG-ADMSVINRCRIDAYQDTLYAHS-QR-QFYRDSYVTGTVDFIFGNA- 159 (317)
T ss_dssp EEE-CSTTCEEESCEEEECCCGGGCCCCSEEEC-CTTEEEESCEEECSTTCEEECS-SE-EEEESCEEEESSSCEEECC-
T ss_pred EEE-ECCCEEEEEeEEecccCCccCceEEEEEe-CCcEEEEEeEeCccccceeecC-cc-EEEEeeEEEeceeEEcCCc-
Confidence 444 678999999999986432 234566664 5889999999999989988877 33 4999999987666666542
Q ss_pred ccCCCCCEEEEEEEeeEEeCCcc----EEEEEeecCCCCceEEcEEEEeeEeecCC
Q 048431 254 KDLDEEGVQNVTVFKTVFTGTTN----GLRIKSWARPSNGFVRGIRFIDALMQNVQ 305 (396)
Q Consensus 254 ~~~~~~~~~ni~i~n~~~~~~~~----gi~i~~~~~~~~g~v~nI~~~ni~~~~~~ 305 (396)
...|+||++..... .-.|..........-...+|.|+++....
T Consensus 160 ---------~avf~~c~i~~~~~~~~~~~~itA~~r~~~~~~~G~vf~~c~i~~~~ 206 (317)
T 1xg2_A 160 ---------AVVFQKCQLVARKPGKYQQNMVTAQGRTDPNQATGTSIQFCNIIASS 206 (317)
T ss_dssp ---------EEEEESCEEEECCCSTTCCEEEEEECCCCTTSCCEEEEESCEEEECT
T ss_pred ---------eEEEeeeEEEEeccCCCCccEEEecCcCCCCCCcEEEEECCEEecCC
Confidence 47899999875321 11232221112234456889999997654
No 74
>2vbk_A Tailspike-protein; viral adhesion protein, viral protein, hydrolase, endorhamnosidase, right-handed parallel beta-helix; 1.25A {Enterobacteria phage SF6} PDB: 2vbe_A 2vbm_A*
Probab=96.25 E-value=0.0078 Score=58.04 Aligned_cols=72 Identities=14% Similarity=0.110 Sum_probs=51.7
Q ss_pred eEEEEEeecCeEEE-EEEEecCCcceEEEeeeecEEEEeEEEEcCCCCCCCCCeeee------------ceeeEEEEecE
Q 048431 151 TTLSITKSNNIRIN-GLLSLNSQMYHIVINRCQDVLVEGAKIIAAGDSPNTDGIHVQ------------QSRNVIIKSSS 217 (396)
Q Consensus 151 ~~i~~~~~~nv~i~-~~~i~~~~~~~i~~~~~~nv~i~n~~i~~~~~~~~~DGi~~~------------~s~nv~I~n~~ 217 (396)
+.+++..|++++++ ++.+. .+|+||.|.||+|...+| .|.+. +|++++
T Consensus 196 WTIhPi~Cqnvt~r~gL~f~---------eSCrNV~IsnC~FsVGDd-----ciaiksGk~~~~~~~~~~se~~~----- 256 (514)
T 2vbk_A 196 WHSKFIACQAGTCRVGLHFL---------GQCVSVSVSSCHFSRGNY-----SADESFGIRIQPQTYAWSSEAVR----- 256 (514)
T ss_dssp EEEEEESCEEEEEEEEEEEE---------SCCEEEEEESCEEECTTS-----CCTTCEEEEEECBCCTTTSSCBC-----
T ss_pred EEEeEeccCceecccCcccc---------CCCCeEEEeccEEecCcc-----eeeeecCceecccccCCcchhcc-----
Confidence 47899999999987 66663 389999999999998664 23222 245444
Q ss_pred EecCCceEEeCCC-----Ccc-EEEEeeeEeCCc
Q 048431 218 IKTGDDCISIGPG-----TNN-LWIERVTCGPGH 245 (396)
Q Consensus 218 i~~~dD~i~i~~~-----~~n-i~i~n~~~~~~~ 245 (396)
+.++.++|. .+| +++++|.+...+
T Consensus 257 ----hgav~igSE~m~~Gvk~~v~v~~Clf~~td 286 (514)
T 2vbk_A 257 ----SEAIILDSETMCIGFKNAVYVHDCLDLHME 286 (514)
T ss_dssp ----CEEEEEESSEEEESCSEEEEESCCEEEEEE
T ss_pred ----cccEEECchhhcccccccEEEEeeeccCCc
Confidence 456777663 688 999999876543
No 75
>3t9g_A Pectate lyase; PL3, parallel beta-helix; HET: GOL; 1.50A {Caldicellulosiruptor bescii}
Probab=96.13 E-value=0.2 Score=42.61 Aligned_cols=132 Identities=12% Similarity=0.058 Sum_probs=92.8
Q ss_pred ecCeEEEEEEEecCCcceEEEeeeecEEEEeEEEEcCCCCCCCCCeeeeceeeEEEEecEEecCCceEEeCCCCccEEEE
Q 048431 158 SNNIRINGLLSLNSQMYHIVINRCQDVLVEGAKIIAAGDSPNTDGIHVQQSRNVIIKSSSIKTGDDCISIGPGTNNLWIE 237 (396)
Q Consensus 158 ~~nv~i~~~~i~~~~~~~i~~~~~~nv~i~n~~i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~i~~~~~ni~i~ 237 (396)
-+..+++|+.|-.....++|.. -+.+|+|++.+.. ..|.+.+.++..++|.+.-.++.+|=+.-..+...+.|+
T Consensus 51 e~GaTLkNvIIG~~~~dGIHC~--G~ctl~NVwwedV----cEDA~T~kg~g~~~I~GGgA~~A~DKV~Q~Ng~Gtv~I~ 124 (196)
T 3t9g_A 51 EKGANLKNVIIGAPGCDGIHCY--GDNVVENVVWEDV----GEDALTVKSEGVVEVIGGSAKEAADKVFQLNAPCTFKVK 124 (196)
T ss_dssp CTTCEEEEEEECSCCTTCEEEC--SSEEEEEEEESSC----CSCSEEECSSEEEEEESCEEEEEEEEEEEECSSEEEEEE
T ss_pred cCCCEEEEEEECCCCcCcEEEc--CCEeEEEEEeeee----eceeeEEcCCCeEEEECCCccCCCceEEEECCCceEEEe
Confidence 4789999999987778899886 4788999999874 468888887778999999999887776655667788898
Q ss_pred eeeEeCCceEEEeeccccCCCCCEEEEEEEeeEEeCCccEEEEEeecCCCCceEEcEEEEeeEeecCC
Q 048431 238 RVTCGPGHGISIGSLAKDLDEEGVQNVTVFKTVFTGTTNGLRIKSWARPSNGFVRGIRFIDALMQNVQ 305 (396)
Q Consensus 238 n~~~~~~~gi~igs~g~~~~~~~~~ni~i~n~~~~~~~~gi~i~~~~~~~~g~v~nI~~~ni~~~~~~ 305 (396)
|.+... .|--.-|-|. ...-++|.++|+++.+....+ +++... -..+++.|+++.++.
T Consensus 125 nF~~~~-~GKl~RSCGn---c~~~r~v~i~~v~~~n~k~~l-~rtdS~-----~~~~~~~n~~~~~~~ 182 (196)
T 3t9g_A 125 NFTATN-IGKLVRQNGN---TTFKVVIYLEDVTLNNVKSCV-AKSDSP-----VSELWYHNLNVNNCK 182 (196)
T ss_dssp EEEEEE-EEEEEEECTT---CCSCEEEEEEEEEEEEEEEEE-EECCCT-----TCEEEEEEEEEEEEE
T ss_pred eEEEcc-CCEEEEcCCC---CCceeEEEEeCeEEeCCEEEE-EEcCCC-----CCEEEEecceecCCC
Confidence 887652 3422233332 123589999999998874443 232211 234566666666654
No 76
>1ee6_A Pectate lyase; parallel beta-helix, high-alkaline, low-molecular-weight; 2.30A {Bacillus SP} SCOP: b.80.1.1
Probab=95.86 E-value=0.48 Score=40.42 Aligned_cols=108 Identities=8% Similarity=0.009 Sum_probs=57.4
Q ss_pred cCeEEEEEEEecCCcceEEEeeeecEEEEeEEEEcCCCCCCCCCeeeeceeeEEEEecEEecCCceEEeCCCCccEEEEe
Q 048431 159 NNIRINGLLSLNSQMYHIVINRCQDVLVEGAKIIAAGDSPNTDGIHVQQSRNVIIKSSSIKTGDDCISIGPGTNNLWIER 238 (396)
Q Consensus 159 ~nv~i~~~~i~~~~~~~i~~~~~~nv~i~n~~i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~i~~~~~ni~i~n 238 (396)
+..+++++.|-.+...++|... +.+|+|++.+.. ..|.+.+.++..++|.+.-.++.+|=+.-..+...+.|+|
T Consensus 48 ~GaTLkNvIIG~~~~dGIHC~G--~CtleNVwwedV----cEDA~T~k~~g~~~I~GGgA~~A~DKV~Q~Ng~Gtv~I~n 121 (197)
T 1ee6_A 48 AGASLKNVVIGAPAADGVHCYG--DCTITNVIWEDV----GEDALTLKSSGTVNISGGAAYKAYDKVFQINAAGTINIRN 121 (197)
T ss_dssp TTEEEEEEEECSSCTTCEEEES--CEEEEEEEESSC----CSCSEEEEESEEEEEESCEEEEEEEEEEEECSSEEEEEES
T ss_pred CCCEEEEEEEcCCCcccEEEcC--ceeEEEEEeeec----cccccEEcCCCeEEEECCCccCCCccEEEecCCceEEEee
Confidence 5677777777655566666653 466666666653 3466666655556666666666555544444445566666
Q ss_pred eeEeCCceEEEeeccccCCCCCEEEEEEEeeEEeCCcc
Q 048431 239 VTCGPGHGISIGSLAKDLDEEGVQNVTVFKTVFTGTTN 276 (396)
Q Consensus 239 ~~~~~~~gi~igs~g~~~~~~~~~ni~i~n~~~~~~~~ 276 (396)
.+.. ..|=-.-|-|.- ..-++|.++|+++.+...
T Consensus 122 F~~~-~~GKl~RScGnc---~~~r~v~i~~v~~~~~k~ 155 (197)
T 1ee6_A 122 FRAD-DIGKLVRQNGGT---TYKVVMNVENCNISRVKD 155 (197)
T ss_dssp CEEE-EEEEEEEECTTC---CSCEEEEEESCEEEEEEE
T ss_pred EEEc-cCCEEEEcCCCC---ccceEEEEeceEEECceE
Confidence 4442 122111122211 122566666666655433
No 77
>3b4n_A Endo-pectate lyase; pectin, galacturonic acid, right-handed parallel beta helix fold; 1.45A {Erwinia chrysanthemi} PDB: 3b8y_A* 3b90_A
Probab=95.56 E-value=0.77 Score=42.49 Aligned_cols=91 Identities=10% Similarity=0.083 Sum_probs=46.2
Q ss_pred eEEEEceEEeCCCCCcccccccCCCCCCCCceEEEEEeecCeEEEEEEEecCCcceEEEeeeecEEEEeEEEEcCCCCCC
Q 048431 120 HVSIIGGALDAKGTSLWACKTAAGSNCPNGATTLSITKSNNIRINGLLSLNSQMYHIVINRCQDVLVEGAKIIAAGDSPN 199 (396)
Q Consensus 120 nv~I~Gg~idg~g~~~w~~~~~~~~~~~~~p~~i~~~~~~nv~i~~~~i~~~~~~~i~~~~~~nv~i~n~~i~~~~~~~~ 199 (396)
.-+|.|+++||.+.+| .. ..++..... ..++.+. +..+++++.|-.....++|... .+.+|+|++.+.. .
T Consensus 124 ~~~i~g~t~Dgg~k~~-~~-~c~~q~E~q-~~vF~le--~GatlkNvIiG~~~~dGIHC~~-G~CtleNVwwedV----c 193 (344)
T 3b4n_A 124 GATFENRTVDCGGVTI-GT-SCPNDSDKQ-KPLIILK--NATVKNLRISASGGADGIHCDS-GNCTIENVIWEDI----C 193 (344)
T ss_dssp TEEEESSEEECTTCEE-CC-CCCTTCSCC-CCSEEEE--SCEEEEEEECTTCCTTCEEEEE-SEEEEEEEEESSC----S
T ss_pred ceeEecceEcCCCcEE-CC-CCCCccccC-ccEEEEc--cCcEEEEEEecCCCccceEEcc-CCeeEEEEeehhc----c
Confidence 3466788889988765 21 111111112 2234444 3456666666555555665541 1355666665542 3
Q ss_pred CCCeeeeceeeEEEEecEEecC
Q 048431 200 TDGIHVQQSRNVIIKSSSIKTG 221 (396)
Q Consensus 200 ~DGi~~~~s~nv~I~n~~i~~~ 221 (396)
.|.+.+.+ ..++|.+.-.++.
T Consensus 194 EDA~T~kg-~~~~I~GGgA~~a 214 (344)
T 3b4n_A 194 EDAATNNG-KTMTIVGGIAHNA 214 (344)
T ss_dssp SCSEEECS-SEEEEESCEEEEC
T ss_pred cccceecC-ceEEEECchhccc
Confidence 35555543 3455555555444
No 78
>1dbg_A Chondroitinase B; beta helix, polysaccharide lyase, dematan sulfate; HET: MAN RAM GCU MXY G4D BGC; 1.70A {Pedobacter heparinus} SCOP: b.80.1.4 PDB: 1dbo_A* 1ofl_A* 1ofm_A*
Probab=95.47 E-value=0.095 Score=52.25 Aligned_cols=142 Identities=7% Similarity=0.058 Sum_probs=93.8
Q ss_pred eecCeEEEEEEEecC-CcceEEEeeeecEEEEeEEEEcCCCCCCCCCeeeeceeeEEEEecEEecCC-----ceEEeCCC
Q 048431 157 KSNNIRINGLLSLNS-QMYHIVINRCQDVLVEGAKIIAAGDSPNTDGIHVQQSRNVIIKSSSIKTGD-----DCISIGPG 230 (396)
Q Consensus 157 ~~~nv~i~~~~i~~~-~~~~i~~~~~~nv~i~n~~i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~~d-----D~i~i~~~ 230 (396)
...+.+|++-.+.+. ....+....+.+.+|++.++... ..||.+..+.+.+|++..+.... .|+.+..
T Consensus 226 ~s~~~~VenN~f~~~~gg~aim~skS~~n~i~~N~~~~~-----~ggi~l~~~~~s~I~~N~f~gN~~~~~~~Gi~i~~- 299 (506)
T 1dbg_A 226 DIGRCLVDSNLFMRQDSEAEIITSKSQENVYYGNTYLNC-----QGTMNFRHGDHQVAINNFYIGNDQRFGYGGMFVWG- 299 (506)
T ss_dssp CBCCCEEESCEEEEECSSSEEEEEESBSCEEESCEEESC-----SSEEEEEECSSCEEESCEEEECSSSSCBCCEEECS-
T ss_pred ccCCcEEECCEEEeccCcEEEEEEecCCEEEECCEEEcc-----cCcEEEeecCccEEECCEEECCcCccCceEEEEEC-
Confidence 356788887666654 33445555666789999999963 34788888888899999887653 5777755
Q ss_pred CccEEEEeeeEeCCc--------eEEEeeccccCCCCCEEEEEEEeeEEeCCcc-EEEEE----------eecCCCCceE
Q 048431 231 TNNLWIERVTCGPGH--------GISIGSLAKDLDEEGVQNVTVFKTVFTGTTN-GLRIK----------SWARPSNGFV 291 (396)
Q Consensus 231 ~~ni~i~n~~~~~~~--------gi~igs~g~~~~~~~~~ni~i~n~~~~~~~~-gi~i~----------~~~~~~~g~v 291 (396)
..+ +|+|+.+.... |+.+..-........+++++|++++|.++.. |+.+. .........=
T Consensus 300 ~~~-~I~nN~f~~~~g~~~~~~~GI~i~~G~~~~~~~~~~~~~I~~Ntfi~n~~~gI~~~~~~~~~~~~~~g~~~~~~~p 378 (506)
T 1dbg_A 300 SRH-VIACNYFELSETIKSRGNAALYLNPGAMASEHALAFDMLIANNAFINVNGYAIHFNPLDERRKEYCAANRLKFETP 378 (506)
T ss_dssp BSC-EEESCEEEESSBCGGGTSEEEEECCBCTTSTTCCCBSEEEESCEEESCSSEEEESSTTHHHHHHHHHHTTCCCBCC
T ss_pred CCC-EEECCEEECCcCccccccccEEEecCCCccccccccCcEEECCEEECCccccEEEcccccccccccccccccccCC
Confidence 444 99999886532 6666311100112357899999999999987 99888 1111111334
Q ss_pred EcEEEEeeEeecCC
Q 048431 292 RGIRFIDALMQNVQ 305 (396)
Q Consensus 292 ~nI~~~ni~~~~~~ 305 (396)
.|++|.|.-+.+..
T Consensus 379 ~~~~~~nN~i~~~~ 392 (506)
T 1dbg_A 379 HQLMLKGNLFFKDK 392 (506)
T ss_dssp CSEEEESCEEECCS
T ss_pred CcEEEEccEEEcCC
Confidence 57788777666544
No 79
>2nsp_A Pectinesterase A; michaelis complex, hydrolase; HET: M8C ADA; 1.70A {Erwinia chrysanthemi} PDB: 2nst_A* 2nt6_A* 2nt9_A* 2ntp_A* 2ntb_A* 2ntq_A* 1qjv_A
Probab=95.19 E-value=0.16 Score=47.98 Aligned_cols=112 Identities=7% Similarity=0.008 Sum_probs=76.6
Q ss_pred eeecEEEEeEEEEcCCC----------------CCCCCCeee-eceeeEEEEecEEecCCceEEeCCCCccEEEEeeeEe
Q 048431 180 RCQDVLVEGAKIIAAGD----------------SPNTDGIHV-QQSRNVIIKSSSIKTGDDCISIGPGTNNLWIERVTCG 242 (396)
Q Consensus 180 ~~~nv~i~n~~i~~~~~----------------~~~~DGi~~-~~s~nv~I~n~~i~~~dD~i~i~~~~~ni~i~n~~~~ 242 (396)
.+++++++|++|.+... ....-++.+ ..++++.++||.|...-|.+.... ....+++|.+.
T Consensus 94 ~a~~f~a~nlt~~Nt~~~~~~~~~~~~~~~~~~~~QAvAl~v~v~~d~~~f~~c~f~G~QDTLy~~~--gr~~~~~c~I~ 171 (342)
T 2nsp_A 94 SAKDFSAQSLTIRNDFDFPANQAKSDSDSSKIKDTQAVALYVTKSGDRAYFKDVSLVGYQATLYVSG--GRSFFSDCRIS 171 (342)
T ss_dssp CSBSCEEEEEEEEECCCHHHHHHSCTTCTTCCSCCCCCSEEECTTCBSEEEEEEEEECSTTCEEECS--SEEEEESCEEE
T ss_pred ECCCEEEEeeEEEccccccccccccccCCccccCCceEEEEEeeccCcEEEEeeEEecccceEEECC--CCEEEEcCEEE
Confidence 47899999999998651 112224421 246899999999999889988876 37999999998
Q ss_pred CCceEEEeeccccCCCCCEEEEEEEeeEEeCCcc---E-----EEEEeecCCCCceEEcEEEEeeEeecC
Q 048431 243 PGHGISIGSLAKDLDEEGVQNVTVFKTVFTGTTN---G-----LRIKSWARPSNGFVRGIRFIDALMQNV 304 (396)
Q Consensus 243 ~~~gi~igs~g~~~~~~~~~ni~i~n~~~~~~~~---g-----i~i~~~~~~~~g~v~nI~~~ni~~~~~ 304 (396)
+.-.+=+|.. ...|+||++.-... + -.|... ......-..+.|.|+++...
T Consensus 172 G~vDFIFG~a----------~a~f~~c~i~~~~~~~~~~~~~~g~ItA~-~~~~~~~~G~vf~~c~i~~~ 230 (342)
T 2nsp_A 172 GTVDFIFGDG----------TALFNNCDLVSRYRADVKSGNVSGYLTAP-STNINQKYGLVITNSRVIRE 230 (342)
T ss_dssp ESEEEEEESS----------EEEEESCEEEECCCTTSCTTSCCEEEEEE-CCBTTCSCCEEEESCEEEES
T ss_pred eceEEEeCCc----------eEEEecCEEEEecCcccccccCceEEEcc-CCCCCCCCEEEEEcCEEecC
Confidence 7777777653 57899999875321 0 123221 11122233488999999865
No 80
>3uw0_A Pectinesterase; right-handed beta-helix, carbohydrate esterase, hydrolase; 3.50A {Yersinia enterocolitica subsp}
Probab=94.80 E-value=0.4 Score=45.61 Aligned_cols=113 Identities=11% Similarity=0.030 Sum_probs=79.2
Q ss_pred eeecEEEEeEEEEcCCC----------------CCCCCCeeee-ceeeEEEEecEEecCCceEEeCCCCccEEEEeeeEe
Q 048431 180 RCQDVLVEGAKIIAAGD----------------SPNTDGIHVQ-QSRNVIIKSSSIKTGDDCISIGPGTNNLWIERVTCG 242 (396)
Q Consensus 180 ~~~nv~i~n~~i~~~~~----------------~~~~DGi~~~-~s~nv~I~n~~i~~~dD~i~i~~~~~ni~i~n~~~~ 242 (396)
.+++++++|++|.+... ....-++.+. ..++..++||.|...-|.+.... .....+++|.+.
T Consensus 120 ~a~~f~a~nitf~Nt~~~~~~~~~~~~~p~~~~~~QAvAl~v~~~~D~~~f~~C~f~G~QDTLy~~~-~gr~yf~~c~I~ 198 (364)
T 3uw0_A 120 NAPNFTAENLTIRNDFDFPANKKKADTDPTKLKDTQAVALLLAENSDKARFKAVKLEGYQDTLYSKT-GSRSYFSDCEIS 198 (364)
T ss_dssp CSTTCEEEEEEEEECCCHHHHHHSCTTCTTCCSCCCCCSEEECTTCEEEEEEEEEEECSBSCEEECT-TCEEEEESCEEE
T ss_pred ECCCEEEEeeeeEcCCcccccccccccccccccCCccEEEEEecCCCeEEEEeeEEEecccceEeCC-CCCEEEEcCEEE
Confidence 56899999999998642 1123355554 47899999999999999998873 458999999999
Q ss_pred CCceEEEeeccccCCCCCEEEEEEEeeEEeCCc------cEEEEEeecCCCCceEEcEEEEeeEeecC
Q 048431 243 PGHGISIGSLAKDLDEEGVQNVTVFKTVFTGTT------NGLRIKSWARPSNGFVRGIRFIDALMQNV 304 (396)
Q Consensus 243 ~~~gi~igs~g~~~~~~~~~ni~i~n~~~~~~~------~gi~i~~~~~~~~g~v~nI~~~ni~~~~~ 304 (396)
+.-.+=+|.. ...|+||++.-.. .+-.|... ......-..++|.|+++...
T Consensus 199 GtvDFIFG~a----------~a~f~~c~i~~~~~~~~~~~~g~ITA~-~~~~~~~~G~vf~~c~i~~~ 255 (364)
T 3uw0_A 199 GHVDFIFGSG----------ITVFDNCNIVARDRSDIEPPYGYITAP-STLTTSPYGLIFINSRLTKE 255 (364)
T ss_dssp ESEEEEEESS----------EEEEESCEEEECCCSSCSSCCEEEEEE-CCCTTCSCCEEEESCEEEEC
T ss_pred cCCCEECCcc----------eEEEEeeEEEEeccCcccCCccEEEeC-CcCCCCCcEEEEEeeEEecC
Confidence 8777777753 5789999987431 11233322 21222234589999999864
No 81
>1ee6_A Pectate lyase; parallel beta-helix, high-alkaline, low-molecular-weight; 2.30A {Bacillus SP} SCOP: b.80.1.1
Probab=94.64 E-value=0.62 Score=39.76 Aligned_cols=109 Identities=13% Similarity=0.196 Sum_probs=68.5
Q ss_pred ecEEEEeEEEEcCCCCCCCCCeeeeceeeEEEEecEEec-CCceEEeCCCCccEEEEeeeEeCCce--EEEeeccccCCC
Q 048431 182 QDVLVEGAKIIAAGDSPNTDGIHVQQSRNVIIKSSSIKT-GDDCISIGPGTNNLWIERVTCGPGHG--ISIGSLAKDLDE 258 (396)
Q Consensus 182 ~nv~i~n~~i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~-~dD~i~i~~~~~ni~i~n~~~~~~~g--i~igs~g~~~~~ 258 (396)
...+++|+.|-. +..||||..+ +.+|+|+.+.. +.|++++++ ...++|.+.-...... +..
T Consensus 48 ~GaTLkNvIIG~----~~~dGIHC~G--~CtleNVwwedVcEDA~T~k~-~g~~~I~GGgA~~A~DKV~Q~--------- 111 (197)
T 1ee6_A 48 AGASLKNVVIGA----PAADGVHCYG--DCTITNVIWEDVGEDALTLKS-SGTVNISGGAAYKAYDKVFQI--------- 111 (197)
T ss_dssp TTEEEEEEEECS----SCTTCEEEES--CEEEEEEEESSCCSCSEEEEE-SEEEEEESCEEEEEEEEEEEE---------
T ss_pred CCCEEEEEEEcC----CCcccEEEcC--ceeEEEEEeeeccccccEEcC-CCeEEEECCCccCCCccEEEe---------
Confidence 478999999975 4689999976 48999999875 789999986 4556666665544333 222
Q ss_pred CCEEEEEEEeeEEeCCccEEEEEeecCCCCceEEcEEEEeeEeecCCccEEE
Q 048431 259 EGVQNVTVFKTVFTGTTNGLRIKSWARPSNGFVRGIRFIDALMQNVQHPIII 310 (396)
Q Consensus 259 ~~~~ni~i~n~~~~~~~~gi~i~~~~~~~~g~v~nI~~~ni~~~~~~~~i~i 310 (396)
.+.-.+.|+|-+..+ .|=-..+..+ - ..-|+|.++|+++.+....+..
T Consensus 112 Ng~Gtv~I~nF~~~~--~GKl~RScGn-c-~~~r~v~i~~v~~~~~k~~i~~ 159 (197)
T 1ee6_A 112 NAAGTINIRNFRADD--IGKLVRQNGG-T-TYKVVMNVENCNISRVKDAILR 159 (197)
T ss_dssp CSSEEEEEESCEEEE--EEEEEEECTT-C-CSCEEEEEESCEEEEEEEEEEE
T ss_pred cCCceEEEeeEEEcc--CCEEEEcCCC-C-ccceEEEEeceEEECceEEEEE
Confidence 122356666655542 2333333322 1 1236778888877776554433
No 82
>3grh_A YBHC, acyl-COA thioester hydrolase YBGC; beta-helix, periplasmic, lipoprotein, outer membrane, carbohydrate esterase family 8; 1.70A {Escherichia coli k-12}
Probab=91.34 E-value=2 Score=41.43 Aligned_cols=115 Identities=10% Similarity=0.055 Sum_probs=77.4
Q ss_pred eeeecEEEEeEEEEcCCCC----CCCCCeeee-ceeeEEEEecEEecCCceEEeCC----------CCccEEEEeeeEeC
Q 048431 179 NRCQDVLVEGAKIIAAGDS----PNTDGIHVQ-QSRNVIIKSSSIKTGDDCISIGP----------GTNNLWIERVTCGP 243 (396)
Q Consensus 179 ~~~~nv~i~n~~i~~~~~~----~~~DGi~~~-~s~nv~I~n~~i~~~dD~i~i~~----------~~~ni~i~n~~~~~ 243 (396)
...+++.++|++|.+.... .....+.+. ..++..+.+|.|....|.+.... -...-.+++|.+.+
T Consensus 198 V~g~~F~a~niTf~Ntag~~~~~~~~QAVAL~v~gDr~~fy~C~f~G~QDTLy~~~~~~~~~~~~d~~gRqyy~~CyIeG 277 (422)
T 3grh_A 198 SQNNGLQLQNLTIENTLGDSVDAGNHPAVALRTDGDQVQINNVNILGRQNTFFVTNSGVQNRLETNRQPRTLVTNSYIEG 277 (422)
T ss_dssp ECCTTCEEEEEEEEETTGGGSCSSCCCCCSEEECCSSEEEEEEEEECSTTCEEECCCCTTCSCCSSCCCEEEEESCEEEE
T ss_pred EECCCEEEEeeEEEeCCCCCCCCCCCceEEEEecCCcEEEEeeEEEeecceeeeccccccccccccccccEEEEecEEec
Confidence 3468899999999986431 122333332 35889999999999999988743 14578999999988
Q ss_pred CceEEEeeccccCCCCCEEEEEEEeeEEeCCcc----EEEEEeecCCCCceEEcEEEEeeEeecC
Q 048431 244 GHGISIGSLAKDLDEEGVQNVTVFKTVFTGTTN----GLRIKSWARPSNGFVRGIRFIDALMQNV 304 (396)
Q Consensus 244 ~~gi~igs~g~~~~~~~~~ni~i~n~~~~~~~~----gi~i~~~~~~~~g~v~nI~~~ni~~~~~ 304 (396)
.-.+=+|.. ...|++|++.-... +-.|... ......-..++|.|+++...
T Consensus 278 tVDFIFG~a----------~AvFe~C~I~s~~~~~~~~g~ITA~-~t~~~~~~Gfvf~nC~ita~ 331 (422)
T 3grh_A 278 DVDIVSGRG----------AVVFDNTEFRVVNSRTQQEAYVFAP-ATLSNIYYGFLAVNSRFNAF 331 (422)
T ss_dssp SEEEEEESS----------EEEEESCEEEECCSSCSSCCEEEEE-CCBTTCCCCEEEESCEEEEC
T ss_pred cccEEccCc----------eEEEEeeEEEEecCCCCCceEEEec-CCCCCCCCEEEEECCEEEeC
Confidence 777777743 67899999874321 1223222 11223345688999999854
No 83
>3b4n_A Endo-pectate lyase; pectin, galacturonic acid, right-handed parallel beta helix fold; 1.45A {Erwinia chrysanthemi} PDB: 3b8y_A* 3b90_A
Probab=86.89 E-value=8.4 Score=35.64 Aligned_cols=53 Identities=15% Similarity=0.131 Sum_probs=39.3
Q ss_pred ecEEEEeEEEEcCCCCCCCCCeeeeceeeEEEEecEEec-CCceEEeCCCCccEEEEeeeE
Q 048431 182 QDVLVEGAKIIAAGDSPNTDGIHVQQSRNVIIKSSSIKT-GDDCISIGPGTNNLWIERVTC 241 (396)
Q Consensus 182 ~nv~i~n~~i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~-~dD~i~i~~~~~ni~i~n~~~ 241 (396)
...+++|+.|-. +..||||... -+.+|+|+.... +.|++.++. ..++|.+.-.
T Consensus 158 ~GatlkNvIiG~----~~~dGIHC~~-G~CtleNVwwedVcEDA~T~kg--~~~~I~GGgA 211 (344)
T 3b4n_A 158 NATVKNLRISAS----GGADGIHCDS-GNCTIENVIWEDICEDAATNNG--KTMTIVGGIA 211 (344)
T ss_dssp SCEEEEEEECTT----CCTTCEEEEE-SEEEEEEEEESSCSSCSEEECS--SEEEEESCEE
T ss_pred cCcEEEEEEecC----CCccceEEcc-CCeeEEEEeehhcccccceecC--ceEEEECchh
Confidence 357888888854 4689999983 258999999875 789999995 3566655544
No 84
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=79.04 E-value=0.81 Score=43.74 Aligned_cols=38 Identities=34% Similarity=0.464 Sum_probs=26.8
Q ss_pred cCccCCCCcccHHHHHHHHHHHhhcCCCcEEEecCc-eEEEec
Q 048431 36 CGAKGNGITDSTQAFAKAWAAACASNESATIYVPKG-RYLLGS 77 (396)
Q Consensus 36 ~Ga~~dg~~d~t~aiq~Ai~~a~~~~~g~~v~iP~G-~Y~~~~ 77 (396)
=||++||++|||+|+.+||.++ ++|..| =-.| ||.+..
T Consensus 4 ~~a~gdgvtddt~a~~~~l~~~---~~~~~I-DG~G~T~kVs~ 42 (670)
T 3ju4_A 4 GSAKGDGVTDDTAALTSALNDT---PVGQKI-NGNGKTYKVTS 42 (670)
T ss_dssp CCCCCEEEEECHHHHHHHHHHS---CTTSCE-ECTTCEEECSS
T ss_pred CcccCCCccCcHHHHHHHhccC---CCCeEE-eCCCceEEeee
Confidence 4799999999999999999654 333333 3333 566554
No 85
>2vfm_A Bifunctional tail protein; P22 tailspike protein, salmonella bacteriophage P22, protein folding, protein stability; 1.50A {Enterobacteria phage P22} PDB: 2vfp_A 2vfo_A 2vfq_A 2vfn_A 1tsp_A 1qrb_A 1qq1_A 1qrc_A 1tyu_A* 1tyv_A 1tyw_A* 1tyx_A* 1qa2_A 1clw_A 1qa3_A 1qa1_A
Probab=74.29 E-value=22 Score=33.06 Aligned_cols=68 Identities=15% Similarity=0.042 Sum_probs=39.8
Q ss_pred CccEEEEeeeEeCC--ceEEEeeccc---------------cCCCCCEEEEEEEeeEEeCCccEEEEEeecCCCCceEEc
Q 048431 231 TNNLWIERVTCGPG--HGISIGSLAK---------------DLDEEGVQNVTVFKTVFTGTTNGLRIKSWARPSNGFVRG 293 (396)
Q Consensus 231 ~~ni~i~n~~~~~~--~gi~igs~g~---------------~~~~~~~~ni~i~n~~~~~~~~gi~i~~~~~~~~g~v~n 293 (396)
+.|+.+|+...-.. +|+.+|+... |....-..|=.|.|..+.++ -|+.+... + .+++|+|
T Consensus 269 nYNLQFRdS~~l~pVWDGFDLGaD~~m~pE~dRPGD~P~sqYP~HqLP~NHliDnllv~gs-LGVG~GMD-G-~G~YVSN 345 (559)
T 2vfm_A 269 NYNLQFRDSVVIYPVWDGFDLGADTDMNPELDRPGDYPITQYPLHQLPLNHLIDNLLVRGA-LGVGFGMD-G-KGMYVSN 345 (559)
T ss_dssp CBSCEEEEEEEESCSSCSEEECCSCSSSCCSCCTTSCCTTTSCTTCCCCCCEEEEEEEECC-SSEEEEEE-E-ESCEEEE
T ss_pred ccceEeecceEEeeccccccccCCCCCCCCCCCCCCcccccCchhhCcchhhhhhheeecc-cceeeeec-C-CCceEee
Confidence 57888888865432 4677776411 11112234556777777775 24444433 3 5678888
Q ss_pred EEEEeeEe
Q 048431 294 IRFIDALM 301 (396)
Q Consensus 294 I~~~ni~~ 301 (396)
|+++++.-
T Consensus 346 itv~DCAG 353 (559)
T 2vfm_A 346 ITVEDCAG 353 (559)
T ss_dssp EEEESCSS
T ss_pred eEehhccC
Confidence 88777743
No 86
>3riq_A Tailspike protein; right handed beta-helix, endorhamnosidase, lipopolysaccharide, viral protein; 1.50A {Siphovirus 9na}
Probab=72.32 E-value=22 Score=33.83 Aligned_cols=36 Identities=14% Similarity=0.130 Sum_probs=25.5
Q ss_pred ccEEEEeeeEeCCceEEEeeccccCCCCCEEEEEEEeeE
Q 048431 232 NNLWIERVTCGPGHGISIGSLAKDLDEEGVQNVTVFKTV 270 (396)
Q Consensus 232 ~ni~i~n~~~~~~~gi~igs~g~~~~~~~~~ni~i~n~~ 270 (396)
.|-.|+|.....+.|+.+|.-|+ .+.++||++++|.
T Consensus 308 ~nHii~Ni~~~~~lGVG~~~DG~---~~~v~ni~~~dca 343 (543)
T 3riq_A 308 TQHIIRNIITRDCMGIGAWWDGQ---KNIIDNVVTYEAH 343 (543)
T ss_dssp CCCEEEEEEEESCSSCSSEECSS---SCEEEEEEEESCS
T ss_pred hhhhhhhhheeccceeeeeecCC---CCeEeeEEeeccc
Confidence 56778888888888887766542 3467777776664
No 87
>2v5i_A Salmonella typhimurium DB7155 bacteriophage DET7 tailspike; O-antigen binding and hydrolysis, beta-helix, viral protein; 1.60A {Bacteriophage}
Probab=69.51 E-value=21 Score=33.30 Aligned_cols=68 Identities=18% Similarity=0.112 Sum_probs=39.1
Q ss_pred CccEEEEeeeEeCC--ceEEEeeccc---------------cCCCCCEEEEEEEeeEEeCCccEEEEEeecCCCCceEEc
Q 048431 231 TNNLWIERVTCGPG--HGISIGSLAK---------------DLDEEGVQNVTVFKTVFTGTTNGLRIKSWARPSNGFVRG 293 (396)
Q Consensus 231 ~~ni~i~n~~~~~~--~gi~igs~g~---------------~~~~~~~~ni~i~n~~~~~~~~gi~i~~~~~~~~g~v~n 293 (396)
+.|+.+|+...-.. +|+.+|+... |....-..|=.|.|..+.++ -|+.+... + .+++|+|
T Consensus 272 nYNLQFRdS~~l~pVWDGFDLGaD~~m~pE~dRPGD~P~sqYP~HqLP~NHliDnllv~gs-LGVG~GMD-G-~G~YVSN 348 (559)
T 2v5i_A 272 NYNLQFRDSVALSPVWDGFDLGSDPGMAPEPDRPGDLPVSEYPFHQLPNNHLVDNILVMNS-LGVGLGMD-G-SGGYVSN 348 (559)
T ss_dssp CBSCEEEEEEEESCSSCSEECCSSCTTCCSSSCTTSCCTTTSCTTCCCCCCEEEEEEEESC-SSEEEEEE-E-ESCEEEE
T ss_pred ccceEeecceEEeeccccccccCCCCCCCCCCCCCCcccccCchhhCcchhhhhhheeecc-cceeeeec-C-CCceEee
Confidence 57888888865432 4677765311 11112234556777777776 24444433 3 5678888
Q ss_pred EEEEeeEe
Q 048431 294 IRFIDALM 301 (396)
Q Consensus 294 I~~~ni~~ 301 (396)
|+++++.-
T Consensus 349 itv~DCAG 356 (559)
T 2v5i_A 349 VTVQDCAG 356 (559)
T ss_dssp EEEESCSS
T ss_pred eEehhccC
Confidence 88777743
No 88
>2xc1_A Bifunctional tail protein; hydrolase, endoglycosidase, salmonella phage P22; HET: PE4; 1.65A {Enterobacteria phage P22} PDB: 1lkt_A
Probab=64.42 E-value=48 Score=32.23 Aligned_cols=68 Identities=15% Similarity=0.042 Sum_probs=39.2
Q ss_pred CccEEEEeeeEeCC--ceEEEeeccc---------------cCCCCCEEEEEEEeeEEeCCccEEEEEeecCCCCceEEc
Q 048431 231 TNNLWIERVTCGPG--HGISIGSLAK---------------DLDEEGVQNVTVFKTVFTGTTNGLRIKSWARPSNGFVRG 293 (396)
Q Consensus 231 ~~ni~i~n~~~~~~--~gi~igs~g~---------------~~~~~~~~ni~i~n~~~~~~~~gi~i~~~~~~~~g~v~n 293 (396)
+.|+.+|+...-.. +|+.+|+... |....-..|=.|+|..+.++ -|+.+... + .+++|+|
T Consensus 376 nynlqfrds~~~~pvwdgfdlg~d~~m~pe~drpgd~p~~~yp~h~lp~nhlidn~~v~~s-lgvg~gmd-g-~g~yvsn 452 (666)
T 2xc1_A 376 NYNLQFRDSVVIYPVWDGFDLGADTDMNPELDRPGDYPITQYPLHQLPLNHLIDNLLVRGA-LGVGFGMD-G-KGMYVSN 452 (666)
T ss_dssp CBSCEEEEEEEECCSSCSEEECCSCSSCTTCCCTTSCCTTTSCTTCCCCCCEEEEEEEESC-SSEEEEEE-E-ESCEEEE
T ss_pred ccceeeecceEEeeccccccccCCCCCCCCCCCCCCcccccCchhhCcchhhhhhheeecc-cceeeeec-C-CCceEee
Confidence 57888888865432 4677766411 11112234556777777775 24444432 3 5678888
Q ss_pred EEEEeeEe
Q 048431 294 IRFIDALM 301 (396)
Q Consensus 294 I~~~ni~~ 301 (396)
|++++|.-
T Consensus 453 itv~dcag 460 (666)
T 2xc1_A 453 ITVEDCAG 460 (666)
T ss_dssp EEEESCSS
T ss_pred eEehhccC
Confidence 87777743
No 89
>2vfm_A Bifunctional tail protein; P22 tailspike protein, salmonella bacteriophage P22, protein folding, protein stability; 1.50A {Enterobacteria phage P22} PDB: 2vfp_A 2vfo_A 2vfq_A 2vfn_A 1tsp_A 1qrb_A 1qq1_A 1qrc_A 1tyu_A* 1tyv_A 1tyw_A* 1tyx_A* 1qa2_A 1clw_A 1qa3_A 1qa1_A
Probab=61.77 E-value=58 Score=30.33 Aligned_cols=80 Identities=19% Similarity=0.198 Sum_probs=51.4
Q ss_pred eeEEEEecEEe-cCCceEEeCCC-----------------------CccEEEEeeeEeCCceEEEeeccccCCCCCEEEE
Q 048431 209 RNVIIKSSSIK-TGDDCISIGPG-----------------------TNNLWIERVTCGPGHGISIGSLAKDLDEEGVQNV 264 (396)
Q Consensus 209 ~nv~I~n~~i~-~~dD~i~i~~~-----------------------~~ni~i~n~~~~~~~gi~igs~g~~~~~~~~~ni 264 (396)
-|..+++...- .-.|++.+++. -.|-.|.|....++-|+.+|..|+ .+++.||
T Consensus 270 YNLQFRdS~~l~pVWDGFDLGaD~~m~pE~dRPGD~P~sqYP~HqLP~NHliDnllv~gsLGVG~GMDG~---G~YVSNi 346 (559)
T 2vfm_A 270 YNLQFRDSVVIYPVWDGFDLGADTDMNPELDRPGDYPITQYPLHQLPLNHLIDNLLVRGALGVGFGMDGK---GMYVSNI 346 (559)
T ss_dssp BSCEEEEEEEESCSSCSEEECCSCSSSCCSCCTTSCCTTTSCTTCCCCCCEEEEEEEECCSSEEEEEEEE---SCEEEEE
T ss_pred cceEeecceEEeeccccccccCCCCCCCCCCCCCCcccccCchhhCcchhhhhhheeecccceeeeecCC---CceEeee
Confidence 34566665543 34678877763 367889999888888888876653 3467777
Q ss_pred EEEeeEEeCCccEEEEEeecCCCCceEEcEEEEeeEeecC
Q 048431 265 TVFKTVFTGTTNGLRIKSWARPSNGFVRGIRFIDALMQNV 304 (396)
Q Consensus 265 ~i~n~~~~~~~~gi~i~~~~~~~~g~v~nI~~~ni~~~~~ 304 (396)
++++|- ..|..+-++ +-+|.||++.+.
T Consensus 347 tv~DCA----GsG~~~~t~---------~~~FtNi~vID~ 373 (559)
T 2vfm_A 347 TVEDCA----GSGAYLLTH---------ESVFTNIAIIDT 373 (559)
T ss_dssp EEESCS----SEEEEEEEE---------SCEEEEEEEESC
T ss_pred Eehhcc----CcceEEeec---------cceeeeeEEEec
Confidence 777764 235544443 246777777654
No 90
>2v5i_A Salmonella typhimurium DB7155 bacteriophage DET7 tailspike; O-antigen binding and hydrolysis, beta-helix, viral protein; 1.60A {Bacteriophage}
Probab=60.40 E-value=58 Score=30.36 Aligned_cols=80 Identities=19% Similarity=0.231 Sum_probs=51.6
Q ss_pred eeEEEEecEEe-cCCceEEeCCC-----------------------CccEEEEeeeEeCCceEEEeeccccCCCCCEEEE
Q 048431 209 RNVIIKSSSIK-TGDDCISIGPG-----------------------TNNLWIERVTCGPGHGISIGSLAKDLDEEGVQNV 264 (396)
Q Consensus 209 ~nv~I~n~~i~-~~dD~i~i~~~-----------------------~~ni~i~n~~~~~~~gi~igs~g~~~~~~~~~ni 264 (396)
-|..+++...- .-.|++.+++. -.|-.|.|....++-|+.+|..|+ .+++.||
T Consensus 273 YNLQFRdS~~l~pVWDGFDLGaD~~m~pE~dRPGD~P~sqYP~HqLP~NHliDnllv~gsLGVG~GMDG~---G~YVSNi 349 (559)
T 2v5i_A 273 YNLQFRDSVALSPVWDGFDLGSDPGMAPEPDRPGDLPVSEYPFHQLPNNHLVDNILVMNSLGVGLGMDGS---GGYVSNV 349 (559)
T ss_dssp BSCEEEEEEEESCSSCSEECCSSCTTCCSSSCTTSCCTTTSCTTCCCCCCEEEEEEEESCSSEEEEEEEE---SCEEEEE
T ss_pred cceEeecceEEeeccccccccCCCCCCCCCCCCCCcccccCchhhCcchhhhhhheeecccceeeeecCC---CceEeee
Confidence 34566665543 34678877762 367889999888888888876653 3467777
Q ss_pred EEEeeEEeCCccEEEEEeecCCCCceEEcEEEEeeEeecC
Q 048431 265 TVFKTVFTGTTNGLRIKSWARPSNGFVRGIRFIDALMQNV 304 (396)
Q Consensus 265 ~i~n~~~~~~~~gi~i~~~~~~~~g~v~nI~~~ni~~~~~ 304 (396)
++++|- ..|..+-++ +-+|.||++.+.
T Consensus 350 tv~DCA----GsG~~~~t~---------~~~FtNi~vID~ 376 (559)
T 2v5i_A 350 TVQDCA----GAGMLAHTY---------NRVFSNITVIDC 376 (559)
T ss_dssp EEESCS----SEEEEEEEE---------SCEEEEEEEESC
T ss_pred Eehhcc----CcceEEeec---------cceeeeeEEEec
Confidence 777764 235544443 246777777654
No 91
>2xc1_A Bifunctional tail protein; hydrolase, endoglycosidase, salmonella phage P22; HET: PE4; 1.65A {Enterobacteria phage P22} PDB: 1lkt_A
Probab=54.41 E-value=84 Score=30.56 Aligned_cols=80 Identities=19% Similarity=0.198 Sum_probs=51.6
Q ss_pred eeEEEEecEEe-cCCceEEeCCC-----------------------CccEEEEeeeEeCCceEEEeeccccCCCCCEEEE
Q 048431 209 RNVIIKSSSIK-TGDDCISIGPG-----------------------TNNLWIERVTCGPGHGISIGSLAKDLDEEGVQNV 264 (396)
Q Consensus 209 ~nv~I~n~~i~-~~dD~i~i~~~-----------------------~~ni~i~n~~~~~~~gi~igs~g~~~~~~~~~ni 264 (396)
-|..+++.... .-.|++.+++. -.|-+|+|....++-|+.+|..|+ .+++.||
T Consensus 377 ynlqfrds~~~~pvwdgfdlg~d~~m~pe~drpgd~p~~~yp~h~lp~nhlidn~~v~~slgvg~gmdg~---g~yvsni 453 (666)
T 2xc1_A 377 YNLQFRDSVVIYPVWDGFDLGADTDMNPELDRPGDYPITQYPLHQLPLNHLIDNLLVRGALGVGFGMDGK---GMYVSNI 453 (666)
T ss_dssp BSCEEEEEEEECCSSCSEEECCSCSSCTTCCCTTSCCTTTSCTTCCCCCCEEEEEEEESCSSEEEEEEEE---SCEEEEE
T ss_pred cceeeecceEEeeccccccccCCCCCCCCCCCCCCcccccCchhhCcchhhhhhheeecccceeeeecCC---CceEeee
Confidence 34566666543 35678888763 367889999888888888876653 3467777
Q ss_pred EEEeeEEeCCccEEEEEeecCCCCceEEcEEEEeeEeecC
Q 048431 265 TVFKTVFTGTTNGLRIKSWARPSNGFVRGIRFIDALMQNV 304 (396)
Q Consensus 265 ~i~n~~~~~~~~gi~i~~~~~~~~g~v~nI~~~ni~~~~~ 304 (396)
++++|- ..|..+-++ +-+|.||++.+.
T Consensus 454 tv~dca----g~g~~~~~~---------~~~ftni~vid~ 480 (666)
T 2xc1_A 454 TVEDCA----GSGAYLLTH---------ESVFTNIAIIDT 480 (666)
T ss_dssp EEESCS----SEEEEEEEE---------SCEEEEEEEESC
T ss_pred Eehhcc----CcceEEeec---------cceeeeeEEEec
Confidence 777764 234444443 245777776654
No 92
>3riq_A Tailspike protein; right handed beta-helix, endorhamnosidase, lipopolysaccharide, viral protein; 1.50A {Siphovirus 9na}
Probab=46.85 E-value=47 Score=31.62 Aligned_cols=70 Identities=9% Similarity=-0.004 Sum_probs=40.9
Q ss_pred CccEEEEeeeEeCC--ceEEEeeccc-------------cCCCCCEEEEEEEeeEEeCCccEEEEEeecCCCCceEEcEE
Q 048431 231 TNNLWIERVTCGPG--HGISIGSLAK-------------DLDEEGVQNVTVFKTVFTGTTNGLRIKSWARPSNGFVRGIR 295 (396)
Q Consensus 231 ~~ni~i~n~~~~~~--~gi~igs~g~-------------~~~~~~~~ni~i~n~~~~~~~~gi~i~~~~~~~~g~v~nI~ 295 (396)
+.|+++++...-.. +|+-+++-.. |+-..-..|=.|+|+..+++ .|+.+. ..+.+++++||+
T Consensus 262 nYnLqF~d~~~i~~~~DG~Dl~aD~g~pe~R~~D~~laqYp~~qLP~nHii~Ni~~~~~-lGVG~~--~DG~~~~v~ni~ 338 (543)
T 3riq_A 262 NYRLVFDNITTIQCYYDGIDVNADTGSPTERVDDYTLAEYPWFQLPTQHIIRNIITRDC-MGIGAW--WDGQKNIIDNVV 338 (543)
T ss_dssp CBSCEEEEEEEESCSSCSCEECSCCSSCCCCSSSCCTTTSCTTCCCCCCEEEEEEEESC-SSCSSE--ECSSSCEEEEEE
T ss_pred eeeEEEeccceEEEeecceeccCCCCCCccCCCCcchhhCchhhCchhhhhhhhheecc-ceeeee--ecCCCCeEeeEE
Confidence 68999999875433 4677765211 11111133445677776665 244333 233788999999
Q ss_pred EEeeEeec
Q 048431 296 FIDALMQN 303 (396)
Q Consensus 296 ~~ni~~~~ 303 (396)
.+++.-.+
T Consensus 339 ~~dcag~G 346 (543)
T 3riq_A 339 TYEAHKEG 346 (543)
T ss_dssp EESCSSCS
T ss_pred eeccccCc
Confidence 87775443
No 93
>1z65_A PRPLP, prion-like protein doppel, doppelganger; transmembrane helix, DHPC, mouse doppel, unknown function; NMR {Synthetic}
Probab=34.43 E-value=20 Score=20.31 Aligned_cols=22 Identities=27% Similarity=0.252 Sum_probs=14.6
Q ss_pred CcchhhHHHHHHHHHHhhcccc
Q 048431 1 MDKFFSTLLYAFLLVLGTNNLL 22 (396)
Q Consensus 1 ~~~~~~~~~~~~l~~l~~~~~~ 22 (396)
|+|-+-.+|++++++|.++...
T Consensus 1 MrkhLG~~wlai~c~LLfs~Ls 22 (30)
T 1z65_A 1 MKNRLGTWWVAILCMLLASHLS 22 (30)
T ss_dssp CCSSCSSHHHHHHHHHHHHHTT
T ss_pred CcchhhhhHHHHHHHHHHhhHH
Confidence 6777777777776666655433
No 94
>2w7z_A EFSQNR, pentapeptide repeat family protein; glutaraldehyde, gyrase inhibitor, cyclic pentylation, chemic modification; HET: LP6; 1.60A {Enterococcus faecalis}
Probab=29.57 E-value=1.1e+02 Score=25.90 Aligned_cols=12 Identities=0% Similarity=-0.008 Sum_probs=5.4
Q ss_pred EEEeEEEEeEEE
Q 048431 329 KISDVIYQDIRG 340 (396)
Q Consensus 329 ~i~nI~~~ni~~ 340 (396)
.+++..|++...
T Consensus 151 ~L~~a~f~~~~L 162 (214)
T 2w7z_A 151 TWXXLLLEACDL 162 (214)
T ss_dssp EEEEEEEESCBC
T ss_pred EEEEEEEEeccc
Confidence 344444444433
No 95
>2x3h_A K5 lyase, K5A lyase; bacteriophage, glycosaminoglycan; 1.60A {Enterobacteria phage k1-5}
Probab=28.65 E-value=3.4e+02 Score=24.75 Aligned_cols=144 Identities=14% Similarity=0.101 Sum_probs=79.3
Q ss_pred EEEEEeecCeEEEEEEEec-----C-CcceEEEeeeecEEEEeEEEEcCCCCCCCCCeeeec------eeeEEEEecEE-
Q 048431 152 TLSITKSNNIRINGLLSLN-----S-QMYHIVINRCQDVLVEGAKIIAAGDSPNTDGIHVQQ------SRNVIIKSSSI- 218 (396)
Q Consensus 152 ~i~~~~~~nv~i~~~~i~~-----~-~~~~i~~~~~~nv~i~n~~i~~~~~~~~~DGi~~~~------s~nv~I~n~~i- 218 (396)
.+.|..-+.-.++++++.. + ..+.+.+....+|++.|+++.+... -|+.+.. -+...|++.+=
T Consensus 130 ~lvfn~p~~g~ls~~ti~~nk~~ds~qg~qvs~~gg~dvsv~~i~fsn~~g----~gfsliayp~~~~p~g~~i~~irg~ 205 (542)
T 2x3h_A 130 YLVFNNPRTGRLSNITVESNKATDTTQGQQVSLAGGSDVTVSDVNFSNVKG----TGFSLIAYPNDAPPDGLMIKGIRGS 205 (542)
T ss_dssp CEEEESCEEEEEEEEEEECCCSSTTCBCCSEEEESCEEEEEEEEEEEEECS----BEEEEEEECSSSCCBSCEEEEEEEE
T ss_pred EEEEeCCCCcceeeEEEecccCCccccceEEEecCCCcceEeeeeeeecCC----CceeEEEcCCCCCCCceEEeccccc
Confidence 4566666666677777653 2 3456888888999999999997321 2222210 12233333332
Q ss_pred ----ec-C-CceEEeCCCCccEEEEeeeEeC--Cce-EEEeeccccCCCCCEEEEEEEeeEEeCCccEEEEEeecCCCCc
Q 048431 219 ----KT-G-DDCISIGPGTNNLWIERVTCGP--GHG-ISIGSLAKDLDEEGVQNVTVFKTVFTGTTNGLRIKSWARPSNG 289 (396)
Q Consensus 219 ----~~-~-dD~i~i~~~~~ni~i~n~~~~~--~~g-i~igs~g~~~~~~~~~ni~i~n~~~~~~~~gi~i~~~~~~~~g 289 (396)
.+ . ..|+-+.+ +.|-+|++....+ .-| +.++....+. -+.||.=++| .+-..=.+. ..-
T Consensus 206 y~g~a~nk~agcvl~ds-s~nslid~via~nypqfgavelk~~a~yn---ivsnvig~~c-----qhv~yngte---~~~ 273 (542)
T 2x3h_A 206 YSGYATNKAAGCVLADS-SVNSLIDNVIAKNYPQFGAVELKGTASYN---IVSNVIGADC-----QHVTYNGTE---GPI 273 (542)
T ss_dssp ECSCCTTCSEEEEEEES-CBSCEEEEEEEESCCTTEEEEEETTCBSC---EEEEEEEESC-----SEEEEEECS---SSC
T ss_pred eeccccccccceEEecc-chhhhhhhhhhhcCCccceEEeecceeee---hhhhhhhccc-----eeEEECCcc---CCc
Confidence 11 1 34555555 8899999987653 334 7776653332 3555554444 333322222 111
Q ss_pred eEEcEEEEeeEeecCCccEEEE
Q 048431 290 FVRGIRFIDALMQNVQHPIIID 311 (396)
Q Consensus 290 ~v~nI~~~ni~~~~~~~~i~i~ 311 (396)
.-.|..++.+...+.+++..+.
T Consensus 274 apsnn~i~~vmannpkyaavv~ 295 (542)
T 2x3h_A 274 APSNNLIKGVMANNPKYAAVVA 295 (542)
T ss_dssp CCCSCEEEEEEEESCSSEEEEC
T ss_pred CCccchhhHhhcCCCceEEEEE
Confidence 2245666777777777665553
No 96
>2w7z_A EFSQNR, pentapeptide repeat family protein; glutaraldehyde, gyrase inhibitor, cyclic pentylation, chemic modification; HET: LP6; 1.60A {Enterococcus faecalis}
Probab=27.48 E-value=1.2e+02 Score=25.51 Aligned_cols=14 Identities=0% Similarity=-0.142 Sum_probs=7.0
Q ss_pred eEEcEEEEeeEeec
Q 048431 290 FVRGIRFIDALMQN 303 (396)
Q Consensus 290 ~v~nI~~~ni~~~~ 303 (396)
..+++.|++..+.+
T Consensus 151 ~L~~a~f~~~~L~~ 164 (214)
T 2w7z_A 151 TWXXLLLEACDLTE 164 (214)
T ss_dssp EEEEEEEESCBCTT
T ss_pred EEEEEEEEeccccc
Confidence 34455555555544
No 97
>2yuh_A Tubulin-specific chaperone C; microtubule, beta-tubulin folding, beta-roll, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=26.16 E-value=54 Score=27.43 Aligned_cols=11 Identities=0% Similarity=0.157 Sum_probs=5.9
Q ss_pred EEEEeecCeEE
Q 048431 153 LSITKSNNIRI 163 (396)
Q Consensus 153 i~~~~~~nv~i 163 (396)
+.+.+|++++|
T Consensus 71 v~i~~C~~~~i 81 (179)
T 2yuh_A 71 VFLEDCSDCVL 81 (179)
T ss_dssp EEEESCBSCEE
T ss_pred EEEEeCCceEE
Confidence 45555555544
No 98
>4dz1_A DALS D-alanine transporter; D-alanine binding, periplasmic, transport protein; 1.90A {Salmonella enterica} PDB: 3r39_A 4f3s_A
Probab=22.53 E-value=28 Score=30.08 Aligned_cols=8 Identities=25% Similarity=-0.251 Sum_probs=0.0
Q ss_pred CcchhhHH
Q 048431 1 MDKFFSTL 8 (396)
Q Consensus 1 ~~~~~~~~ 8 (396)
|||.+.++
T Consensus 1 Mmk~~~~~ 8 (259)
T 4dz1_A 1 MLSKKFGL 8 (259)
T ss_dssp --------
T ss_pred CcHHHHHH
Confidence 66655433
Done!