BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048432
(354 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 165 bits (418), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 107/317 (33%), Positives = 159/317 (50%), Gaps = 45/317 (14%)
Query: 34 QLPLFSFSSVSTATNKFSDANKLGEGGFGPVYKGVLKNGDEIAVKRLSGRSGQG------ 87
QL FS + A++ FS+ N LG GGFG VYKG L +G +AVKRL QG
Sbjct: 24 QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQ 83
Query: 88 -------LRELKNKLRLLGCCIDKDEKILIYEYMPNKSLDFFL---------FDWVTRVR 131
+ +N LRL G C+ E++L+Y YM N S+ L DW R R
Sbjct: 84 TEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQR 143
Query: 132 IIEGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGR 191
I G A+GL YLH + +IIHRD+K +NILLD++ + DFG+A++ +
Sbjct: 144 IALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXA- 202
Query: 192 IVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGKKTTGFYRTYS---FTLLGYISE 248
+ GT +++PEY G S K+DVF +GV+LL++++G++ R + LL ++
Sbjct: 203 VRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVK- 261
Query: 249 NIYEFPSVDTHNVKTFGFLHLTIFKLFSISSVGLSNDIVCLCILRYVNIALLCVQESADD 308
G L KL ++ V L + + + + +ALLC Q S +
Sbjct: 262 ----------------GLLKEK--KLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPME 303
Query: 309 RPTMNDVVSMLTNEAAA 325
RP M++VV ML + A
Sbjct: 304 RPKMSEVVRMLEGDGLA 320
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 160 bits (406), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 105/317 (33%), Positives = 157/317 (49%), Gaps = 45/317 (14%)
Query: 34 QLPLFSFSSVSTATNKFSDANKLGEGGFGPVYKGVLKNGDEIAVKRLSGRSGQG------ 87
QL FS + A++ F + N LG GGFG VYKG L +G +AVKRL QG
Sbjct: 16 QLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQ 75
Query: 88 -------LRELKNKLRLLGCCIDKDEKILIYEYMPNKSLDFFL---------FDWVTRVR 131
+ +N LRL G C+ E++L+Y YM N S+ L DW R R
Sbjct: 76 TEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQR 135
Query: 132 IIEGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGR 191
I G A+GL YLH + +IIHRD+K +NILLD++ + DFG+A++ +
Sbjct: 136 IALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXA- 194
Query: 192 IVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGKKTTGFYRTYS---FTLLGYISE 248
+ G +++PEY G S K+DVF +GV+LL++++G++ R + LL ++
Sbjct: 195 VRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVK- 253
Query: 249 NIYEFPSVDTHNVKTFGFLHLTIFKLFSISSVGLSNDIVCLCILRYVNIALLCVQESADD 308
G L KL ++ V L + + + + +ALLC Q S +
Sbjct: 254 ----------------GLLKEK--KLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPME 295
Query: 309 RPTMNDVVSMLTNEAAA 325
RP M++VV ML + A
Sbjct: 296 RPKMSEVVRMLEGDGLA 312
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 147 bits (371), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 104/300 (34%), Positives = 166/300 (55%), Gaps = 46/300 (15%)
Query: 43 VSTATNKFSDANKLGEGGFGPVYKGVLKNGDEIAVKRLSGRSGQGLREL----------- 91
+ ATN F +G G FG VYKGVL++G ++A+KR + S QG+ E
Sbjct: 34 LEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCR 93
Query: 92 -KNKLRLLGCCIDKDEKILIYEYMPNKSLDFFLF---------DWVTRVRIIEGIAQGLL 141
+ + L+G C +++E ILIY+YM N +L L+ W R+ I G A+GL
Sbjct: 94 HPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLH 153
Query: 142 YLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNEL-QANTGRIV-GTYRYM 199
YLH + IIHRD+K NILLD++ PKI+DFGI++ +G EL Q + +V GT Y+
Sbjct: 154 YLHTRA---IIHRDVKSINILLDENFVPKITDFGISK--KGTELGQTHLXXVVKGTLGYI 208
Query: 200 SPEYAIQGIFSIKSDVFSFGVLLLKIVSGKKTTGFYRTYSFTLLGYISENIYEFPSVDTH 259
PEY I+G + KSDV+SFGV+L +++ + + ++ ++ N+ E+ +V++H
Sbjct: 209 DPEYFIKGRLTEKSDVYSFGVVLFEVLCAR--SAIVQSLPREMV-----NLAEW-AVESH 260
Query: 260 NVKTFGFLHLTIFKLFSISSVGLSNDIVCLCILRYVNIALLCVQESADDRPTMNDVVSML 319
N +L I L++ I + ++ + A+ C+ S++DRP+M DV+ L
Sbjct: 261 NNG----------QLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKL 310
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 147 bits (371), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 104/300 (34%), Positives = 166/300 (55%), Gaps = 46/300 (15%)
Query: 43 VSTATNKFSDANKLGEGGFGPVYKGVLKNGDEIAVKRLSGRSGQGLREL----------- 91
+ ATN F +G G FG VYKGVL++G ++A+KR + S QG+ E
Sbjct: 34 LEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCR 93
Query: 92 -KNKLRLLGCCIDKDEKILIYEYMPNKSLDFFLF---------DWVTRVRIIEGIAQGLL 141
+ + L+G C +++E ILIY+YM N +L L+ W R+ I G A+GL
Sbjct: 94 HPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLH 153
Query: 142 YLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNEL-QANTGRIV-GTYRYM 199
YLH + IIHRD+K NILLD++ PKI+DFGI++ +G EL Q + +V GT Y+
Sbjct: 154 YLHTRA---IIHRDVKSINILLDENFVPKITDFGISK--KGTELDQTHLXXVVKGTLGYI 208
Query: 200 SPEYAIQGIFSIKSDVFSFGVLLLKIVSGKKTTGFYRTYSFTLLGYISENIYEFPSVDTH 259
PEY I+G + KSDV+SFGV+L +++ + + ++ ++ N+ E+ +V++H
Sbjct: 209 DPEYFIKGRLTEKSDVYSFGVVLFEVLCAR--SAIVQSLPREMV-----NLAEW-AVESH 260
Query: 260 NVKTFGFLHLTIFKLFSISSVGLSNDIVCLCILRYVNIALLCVQESADDRPTMNDVVSML 319
N +L I L++ I + ++ + A+ C+ S++DRP+M DV+ L
Sbjct: 261 NNG----------QLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKL 310
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 138 bits (348), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 90/229 (39%), Positives = 120/229 (52%), Gaps = 35/229 (15%)
Query: 38 FSFSSVSTATNKFSD------ANKLGEGGFGPVYKGVLKNGDEIAVKRLSGRSGQGLREL 91
FSF + TN F + NK+GEGGFG VYKG + N +AVK+L+ EL
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 73
Query: 92 K----------------NKLRLLGCCIDKDEKILIYEYMPNKSLDFFL--------FDWV 127
K N + LLG D D+ L+Y YMPN SL L W
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 133
Query: 128 TRVRIIEGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQA 187
R +I +G A G+ +LH+ IHRD+K +NILLD+ KISDFG+AR
Sbjct: 134 MRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTV 190
Query: 188 NTGRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGKKTTGFYR 236
RIVGT YM+PE A++G + KSD++SFGV+LL+I++G +R
Sbjct: 191 MXSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHR 238
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 137 bits (346), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 90/229 (39%), Positives = 120/229 (52%), Gaps = 35/229 (15%)
Query: 38 FSFSSVSTATNKFSD------ANKLGEGGFGPVYKGVLKNGDEIAVKRLSGRSGQGLREL 91
FSF + TN F + NK+GEGGFG VYKG + N +AVK+L+ EL
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 73
Query: 92 K----------------NKLRLLGCCIDKDEKILIYEYMPNKSLDFFL--------FDWV 127
K N + LLG D D+ L+Y YMPN SL L W
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 133
Query: 128 TRVRIIEGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQA 187
R +I +G A G+ +LH+ IHRD+K +NILLD+ KISDFG+AR
Sbjct: 134 MRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTV 190
Query: 188 NTGRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGKKTTGFYR 236
RIVGT YM+PE A++G + KSD++SFGV+LL+I++G +R
Sbjct: 191 MXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHR 238
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 137 bits (346), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 90/229 (39%), Positives = 120/229 (52%), Gaps = 35/229 (15%)
Query: 38 FSFSSVSTATNKFSD------ANKLGEGGFGPVYKGVLKNGDEIAVKRLSGRSGQGLREL 91
FSF + TN F + NK+GEGGFG VYKG + N +AVK+L+ EL
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEEL 67
Query: 92 K----------------NKLRLLGCCIDKDEKILIYEYMPNKSLDFFL--------FDWV 127
K N + LLG D D+ L+Y YMPN SL L W
Sbjct: 68 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 127
Query: 128 TRVRIIEGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQA 187
R +I +G A G+ +LH+ IHRD+K +NILLD+ KISDFG+AR
Sbjct: 128 MRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXV 184
Query: 188 NTGRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGKKTTGFYR 236
RIVGT YM+PE A++G + KSD++SFGV+LL+I++G +R
Sbjct: 185 MXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHR 232
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 132 bits (331), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 102/318 (32%), Positives = 140/318 (44%), Gaps = 55/318 (17%)
Query: 38 FSFSSVSTATNKFSD------ANKLGEGGFGPVYKGVLKNGDEIAVKRLSGRSGQGLREL 91
FSF + TN F + NK GEGGFG VYKG + N +AVK+L+ EL
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEEL 64
Query: 92 K----------------NKLRLLGCCIDKDEKILIYEYMPNKSLDFFL--------FDWV 127
K N + LLG D D+ L+Y Y PN SL L W
Sbjct: 65 KQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWH 124
Query: 128 TRVRIIEGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQA 187
R +I +G A G+ +LH+ IHRD+K +NILLD+ KISDFG+AR
Sbjct: 125 XRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXV 181
Query: 188 NTGRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGKKTTGFYRTYSFTLLGYIS 247
RIVGT Y +PE A++G + KSD++SFGV+LL+I++G +R L
Sbjct: 182 XXSRIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEE 240
Query: 248 ENIYEFPSVDTHNVKTFGFLHLTIFKLFSISSVGLSNDIVCLCILRYVNIALLCVQESAD 307
E D + K ND + ++A C+ E +
Sbjct: 241 IEDEEKTIEDYIDKKX--------------------NDADSTSVEAXYSVASQCLHEKKN 280
Query: 308 DRPTMNDVVSMLTNEAAA 325
RP + V +L A+
Sbjct: 281 KRPDIKKVQQLLQEXTAS 298
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 135/286 (47%), Gaps = 55/286 (19%)
Query: 54 NKLGEGGFGPVYKGVLKNGDEIAVKRLSG--RSGQGLRELKN--------KLRLLGCCID 103
+LG G FG V+ G N ++AVK L S Q E N KL L +
Sbjct: 19 KRLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVT 78
Query: 104 KDEKI-LIYEYMPNKSL-DFFLFDWVTRV---RIIE---GIAQGLLYLHQYSRVRIIHRD 155
++E I +I EYM SL DF D +V ++I+ IA+G+ Y+ R IHRD
Sbjct: 79 REEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE---RKNYIHRD 135
Query: 156 LKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKSDV 215
L+ +N+L+ + + KI+DFG+AR+ NE A G ++ +PE G F+IKSDV
Sbjct: 136 LRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPI-KWTAPEAINFGCFTIKSDV 194
Query: 216 FSFGVLLLKIVSGKKTTGFYRTYSFTLLGYISENIYEFPSVDTHNVKTFGFLHLTIFKLF 275
+SFG+LL +IV+ K RT + ++ +S+ Y P V+
Sbjct: 195 WSFGILLYEIVTYGKIPYPGRTNA-DVMTALSQG-YRMPRVEN----------------- 235
Query: 276 SISSVGLSNDIVCLCILRYVNIALLCVQESADDRPTMNDVVSMLTN 321
C +I +C +E A++RPT + + S+L +
Sbjct: 236 --------------CPDELYDIMKMCWKEKAEERPTFDYLQSVLDD 267
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 87/285 (30%), Positives = 135/285 (47%), Gaps = 55/285 (19%)
Query: 55 KLGEGGFGPVYKGVLKNGDEIAVKRLSG--RSGQGLRELKN--------KLRLLGCCIDK 104
KLG G FG V+ G N ++AVK L S Q E N KL L + K
Sbjct: 19 KLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTK 78
Query: 105 DEKI-LIYEYMPNKSL-DFFLFDWVTRV---RIIE---GIAQGLLYLHQYSRVRIIHRDL 156
+E I +I E+M SL DF D +V ++I+ IA+G+ Y+ R IHRDL
Sbjct: 79 EEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE---RKNYIHRDL 135
Query: 157 KVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVF 216
+ +N+L+ + + KI+DFG+AR+ NE A G ++ +PE G F+IKS+V+
Sbjct: 136 RAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPI-KWTAPEAINFGCFTIKSNVW 194
Query: 217 SFGVLLLKIVSGKKTTGFYRTYSFTLLGYISENIYEFPSVDTHNVKTFGFLHLTIFKLFS 276
SFG+LL +IV+ K RT + ++ +S+ Y P ++
Sbjct: 195 SFGILLYEIVTYGKIPYPGRTNA-DVMSALSQG-YRMPRMEN------------------ 234
Query: 277 ISSVGLSNDIVCLCILRYVNIALLCVQESADDRPTMNDVVSMLTN 321
C +I +C +E A++RPT + + S+L +
Sbjct: 235 -------------CPDELYDIMKMCWKEKAEERPTFDYLQSVLDD 266
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 131/298 (43%), Gaps = 58/298 (19%)
Query: 55 KLGEGGFGPVYKGVLKNGDEIAVKRLSG---------RSGQGLRELK-NKLRLLGCCIDK 104
+LG G FG V+ G ++A+K L Q +++LK +KL L + +
Sbjct: 16 RLGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMKKLKHDKLVQLYAVVSE 75
Query: 105 DEKILIYEYMPNKSLDFFLFDWVTR-------VRIIEGIAQGLLYLHQYSRVRIIHRDLK 157
+ ++ EYM SL FL D R V + +A G+ Y+ R+ IHRDL+
Sbjct: 76 EPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIE---RMNYIHRDLR 132
Query: 158 VSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVFS 217
+NIL+ + KI+DFG+AR+ NE A G ++ +PE A+ G F+IKSDV+S
Sbjct: 133 SANILVGNGLICKIADFGLARLIEDNEXTARQGAKF-PIKWTAPEAALYGRFTIKSDVWS 191
Query: 218 FGVLLLKIVSGKKTTGFYRTYSFTLLGYISENIYEFPSVDTHNVKTFGFLHLTIFKLFSI 277
FG+LL ++V+ + +P ++ V +
Sbjct: 192 FGILLTELVTKGRVP--------------------YPGMNNREV---------------L 216
Query: 278 SSVGLSNDIVCL--CILRYVNIALLCVQESADDRPTMNDVVSMLTNEAAALLPPKQPA 333
V + C C + + + C ++ ++RPT + S L + A P QP
Sbjct: 217 EQVERGYRMPCPQDCPISLHELMIHCWKKDPEERPTFEYLQSFLEDYFTATEPQYQPG 274
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 104/190 (54%), Gaps = 21/190 (11%)
Query: 55 KLGEGGFGPVYKGVLKNGDEIAVKRLSG---------RSGQGLRELKN-KLRLLGCCIDK 104
KLG+G FG V+ G +A+K L + Q +++L++ KL L + +
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 105 DEKILIYEYMPNKSL-DFFLFDWVTRVRIIE------GIAQGLLYLHQYSRVRIIHRDLK 157
+ ++ EYM SL DF + +R+ + IA G+ Y+ R+ +HRDL+
Sbjct: 251 EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLR 307
Query: 158 VSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVFS 217
+NIL+ +++ K++DFG+AR+ NE A G ++ +PE A+ G F+IKSDV+S
Sbjct: 308 AANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWS 366
Query: 218 FGVLLLKIVS 227
FG+LL ++ +
Sbjct: 367 FGILLTELTT 376
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 104/190 (54%), Gaps = 21/190 (11%)
Query: 55 KLGEGGFGPVYKGVLKNGDEIAVKRLSG---------RSGQGLRELKN-KLRLLGCCIDK 104
KLG+G FG V+ G +A+K L + Q +++L++ KL L + +
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 105 DEKILIYEYMPNKSL-DFFLFDWVTRVRIIE------GIAQGLLYLHQYSRVRIIHRDLK 157
+ ++ EYM SL DF + +R+ + IA G+ Y+ R+ +HRDL+
Sbjct: 251 EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLR 307
Query: 158 VSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVFS 217
+NIL+ +++ K++DFG+AR+ NE A G ++ +PE A+ G F+IKSDV+S
Sbjct: 308 AANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWS 366
Query: 218 FGVLLLKIVS 227
FG+LL ++ +
Sbjct: 367 FGILLTELTT 376
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 104/190 (54%), Gaps = 21/190 (11%)
Query: 55 KLGEGGFGPVYKGVLKNGDEIAVKRLSG---------RSGQGLRELKN-KLRLLGCCIDK 104
KLG+G FG V+ G +A+K L + Q +++L++ KL L + +
Sbjct: 274 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 333
Query: 105 DEKILIYEYMPNKSL-DFFLFDWVTRVRIIE------GIAQGLLYLHQYSRVRIIHRDLK 157
+ ++ EYM SL DF + +R+ + IA G+ Y+ R+ +HRDL+
Sbjct: 334 EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLR 390
Query: 158 VSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVFS 217
+NIL+ +++ K++DFG+AR+ NE A G ++ +PE A+ G F+IKSDV+S
Sbjct: 391 AANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWS 449
Query: 218 FGVLLLKIVS 227
FG+LL ++ +
Sbjct: 450 FGILLTELTT 459
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 104/190 (54%), Gaps = 21/190 (11%)
Query: 55 KLGEGGFGPVYKGVLKNGDEIAVKRLSG---------RSGQGLRELKN-KLRLLGCCIDK 104
KLG+G FG V+ G +A+K L + Q +++L++ KL L + +
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 105 DEKILIYEYMPNKSL-DFFLFDWVTRVRIIE------GIAQGLLYLHQYSRVRIIHRDLK 157
+ ++ EYM SL DF + +R+ + IA G+ Y+ R+ +HRDL+
Sbjct: 251 EPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLR 307
Query: 158 VSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVFS 217
+NIL+ +++ K++DFG+AR+ NE A G ++ +PE A+ G F+IKSDV+S
Sbjct: 308 AANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWS 366
Query: 218 FGVLLLKIVS 227
FG+LL ++ +
Sbjct: 367 FGILLTELTT 376
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 104/190 (54%), Gaps = 21/190 (11%)
Query: 55 KLGEGGFGPVYKGVLKNGDEIAVKRLSG---------RSGQGLRELKN-KLRLLGCCIDK 104
KLG+G FG V+ G +A+K L + Q +++L++ KL L + +
Sbjct: 14 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 73
Query: 105 DEKILIYEYMPNKSL-DFFLFDWVTRVRIIE------GIAQGLLYLHQYSRVRIIHRDLK 157
+ ++ EYM SL DF + +R+ + IA G+ Y+ R+ +HRDL+
Sbjct: 74 EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLR 130
Query: 158 VSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVFS 217
+NIL+ +++ K++DFG+AR+ NE A G ++ +PE A+ G F+IKSDV+S
Sbjct: 131 AANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWS 189
Query: 218 FGVLLLKIVS 227
FG+LL ++ +
Sbjct: 190 FGILLTELTT 199
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 104/190 (54%), Gaps = 21/190 (11%)
Query: 55 KLGEGGFGPVYKGVLKNGDEIAVKRLSG---------RSGQGLRELKN-KLRLLGCCIDK 104
KLG+G FG V+ G +A+K L + Q +++L++ KL L + +
Sbjct: 16 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 75
Query: 105 DEKILIYEYMPNKSL-DFFLFDWVTRVRIIE------GIAQGLLYLHQYSRVRIIHRDLK 157
+ ++ EYM SL DF + +R+ + IA G+ Y+ R+ +HRDL+
Sbjct: 76 EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLR 132
Query: 158 VSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVFS 217
+NIL+ +++ K++DFG+AR+ NE A G ++ +PE A+ G F+IKSDV+S
Sbjct: 133 AANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWS 191
Query: 218 FGVLLLKIVS 227
FG+LL ++ +
Sbjct: 192 FGILLTELTT 201
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 104/190 (54%), Gaps = 21/190 (11%)
Query: 55 KLGEGGFGPVYKGVLKNGDEIAVKRLSG---------RSGQGLRELKN-KLRLLGCCIDK 104
KLG+G FG V+ G +A+K L + Q +++L++ KL L + +
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 105 DEKILIYEYMPNKSL-DFFLFDWVTRVRIIE------GIAQGLLYLHQYSRVRIIHRDLK 157
+ ++ EYM SL DF + +R+ + IA G+ Y+ R+ +HRDL+
Sbjct: 85 EPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLR 141
Query: 158 VSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVFS 217
+NIL+ +++ K++DFG+AR+ NE A G ++ +PE A+ G F+IKSDV+S
Sbjct: 142 AANILVGENLVCKVADFGLARLIEDNEXTARQGAKF-PIKWTAPEAALYGRFTIKSDVWS 200
Query: 218 FGVLLLKIVS 227
FG+LL ++ +
Sbjct: 201 FGILLTELTT 210
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 104/190 (54%), Gaps = 21/190 (11%)
Query: 55 KLGEGGFGPVYKGVLKNGDEIAVKRLSG---------RSGQGLRELKN-KLRLLGCCIDK 104
KLG+G FG V+ G +A+K L + Q +++L++ KL L + +
Sbjct: 15 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 74
Query: 105 DEKILIYEYMPNKSL-DFFLFDWVTRVRIIE------GIAQGLLYLHQYSRVRIIHRDLK 157
+ ++ EYM SL DF + +R+ + IA G+ Y+ R+ +HRDL+
Sbjct: 75 EPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLR 131
Query: 158 VSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVFS 217
+NIL+ +++ K++DFG+AR+ NE A G ++ +PE A+ G F+IKSDV+S
Sbjct: 132 AANILVGENLVCKVADFGLARLIEDNEXTARQGAKF-PIKWTAPEAALYGRFTIKSDVWS 190
Query: 218 FGVLLLKIVS 227
FG+LL ++ +
Sbjct: 191 FGILLTELTT 200
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 104/190 (54%), Gaps = 21/190 (11%)
Query: 55 KLGEGGFGPVYKGVLKNGDEIAVKRLSG---------RSGQGLRELKN-KLRLLGCCIDK 104
KLG+G FG V+ G +A+K L + Q +++L++ KL L + +
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 105 DEKILIYEYMPNKSL-DFFLFDWVTRVRIIE------GIAQGLLYLHQYSRVRIIHRDLK 157
+ ++ EYM SL DF + +R+ + IA G+ Y+ R+ +HRDL+
Sbjct: 85 EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLR 141
Query: 158 VSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVFS 217
+NIL+ +++ K++DFG+AR+ NE A G ++ +PE A+ G F+IKSDV+S
Sbjct: 142 AANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWS 200
Query: 218 FGVLLLKIVS 227
FG+LL ++ +
Sbjct: 201 FGILLTELTT 210
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 104/190 (54%), Gaps = 21/190 (11%)
Query: 55 KLGEGGFGPVYKGVLKNGDEIAVKRLSG---------RSGQGLRELKN-KLRLLGCCIDK 104
KLG+G FG V+ G +A+K L + Q +++L++ KL L + +
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 105 DEKILIYEYMPNKSL-DFFLFDWVTRVRIIE------GIAQGLLYLHQYSRVRIIHRDLK 157
+ ++ EYM SL DF + +R+ + IA G+ Y+ R+ +HRDL+
Sbjct: 85 EPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLR 141
Query: 158 VSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVFS 217
+NIL+ +++ K++DFG+AR+ NE A G ++ +PE A+ G F+IKSDV+S
Sbjct: 142 AANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWS 200
Query: 218 FGVLLLKIVS 227
FG+LL ++ +
Sbjct: 201 FGILLTELTT 210
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 104/190 (54%), Gaps = 21/190 (11%)
Query: 55 KLGEGGFGPVYKGVLKNGDEIAVKRLSG---------RSGQGLRELKN-KLRLLGCCIDK 104
KLG+G FG V+ G +A+K L + Q +++L++ KL L + +
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 105 DEKILIYEYMPNKSL-DFFLFDWVTRVRIIE------GIAQGLLYLHQYSRVRIIHRDLK 157
+ ++ EYM SL DF + +R+ + IA G+ Y+ R+ +HRDL+
Sbjct: 85 EPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLR 141
Query: 158 VSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVFS 217
+NIL+ +++ K++DFG+AR+ NE A G ++ +PE A+ G F+IKSDV+S
Sbjct: 142 AANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWS 200
Query: 218 FGVLLLKIVS 227
FG+LL ++ +
Sbjct: 201 FGILLTELTT 210
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 104/190 (54%), Gaps = 21/190 (11%)
Query: 55 KLGEGGFGPVYKGVLKNGDEIAVKRLSG---------RSGQGLRELKN-KLRLLGCCIDK 104
KLG+G FG V+ G +A+K L + Q +++L++ KL L + +
Sbjct: 18 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 77
Query: 105 DEKILIYEYMPNKSL-DFFLFDWVTRVRIIE------GIAQGLLYLHQYSRVRIIHRDLK 157
+ ++ EYM SL DF + +R+ + IA G+ Y+ R+ +HRDL+
Sbjct: 78 EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLR 134
Query: 158 VSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVFS 217
+NIL+ +++ K++DFG+AR+ NE A G ++ +PE A+ G F+IKSDV+S
Sbjct: 135 AANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWS 193
Query: 218 FGVLLLKIVS 227
FG+LL ++ +
Sbjct: 194 FGILLTELTT 203
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 104/190 (54%), Gaps = 21/190 (11%)
Query: 55 KLGEGGFGPVYKGVLKNGDEIAVKRLSG---------RSGQGLRELKN-KLRLLGCCIDK 104
KLG+G FG V+ G +A+K L + Q +++L++ KL L + +
Sbjct: 22 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 81
Query: 105 DEKILIYEYMPNKSL-DFFLFDWVTRVRIIE------GIAQGLLYLHQYSRVRIIHRDLK 157
+ ++ EYM SL DF + +R+ + IA G+ Y+ R+ +HRDL+
Sbjct: 82 EPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVE---RMNYVHRDLR 138
Query: 158 VSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVFS 217
+NIL+ +++ K++DFG+AR+ NE A G ++ +PE A+ G F+IKSDV+S
Sbjct: 139 AANILVGENLVCKVADFGLARLIEDNEWTARQGAKF-PIKWTAPEAALYGRFTIKSDVWS 197
Query: 218 FGVLLLKIVS 227
FG+LL ++ +
Sbjct: 198 FGILLTELTT 207
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 103/190 (54%), Gaps = 21/190 (11%)
Query: 55 KLGEGGFGPVYKGVLKNGDEIAVKRLSG---------RSGQGLRELKN-KLRLLGCCIDK 104
KLG+G FG V+ G +A+K L + Q +++L++ KL L + +
Sbjct: 192 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 251
Query: 105 DEKILIYEYMPNKSL-DFFLFDWVTRVRIIE------GIAQGLLYLHQYSRVRIIHRDLK 157
+ ++ EYM SL DF + +R+ + IA G+ Y+ R+ +HRDL+
Sbjct: 252 EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLR 308
Query: 158 VSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVFS 217
+NIL+ +++ K++DFG+ R+ NE A G ++ +PE A+ G F+IKSDV+S
Sbjct: 309 AANILVGENLVCKVADFGLGRLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWS 367
Query: 218 FGVLLLKIVS 227
FG+LL ++ +
Sbjct: 368 FGILLTELTT 377
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 104/190 (54%), Gaps = 21/190 (11%)
Query: 55 KLGEGGFGPVYKGVLKNGDEIAVKRLSG---------RSGQGLRELKN-KLRLLGCCIDK 104
KLG+G FG V+ G +A+K L + Q +++L++ KL L + +
Sbjct: 22 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 81
Query: 105 DEKILIYEYMPNKSL-DFFLFDWVTRVRIIE------GIAQGLLYLHQYSRVRIIHRDLK 157
+ ++ EYM SL DF + +R+ + IA G+ Y+ R+ +HRDL+
Sbjct: 82 EPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVE---RMNYVHRDLR 138
Query: 158 VSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVFS 217
+NIL+ +++ K++DFG+AR+ NE A G ++ +PE A+ G F+IKSDV+S
Sbjct: 139 AANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWS 197
Query: 218 FGVLLLKIVS 227
FG+LL ++ +
Sbjct: 198 FGILLTELTT 207
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 103/190 (54%), Gaps = 21/190 (11%)
Query: 55 KLGEGGFGPVYKGVLKNGDEIAVKRLSG---------RSGQGLRELKN-KLRLLGCCIDK 104
KLG+G FG V+ G +A+K L + Q +++L++ KL L + +
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 105 DEKILIYEYMPNKSL-DFFLFDWVTRVRIIE------GIAQGLLYLHQYSRVRIIHRDLK 157
+ ++ EYM SL DF + +R+ + IA G+ Y+ R+ +HRDL
Sbjct: 85 EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLA 141
Query: 158 VSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVFS 217
+NIL+ +++ K++DFG+AR+ NE A G ++ +PE A+ G F+IKSDV+S
Sbjct: 142 AANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWS 200
Query: 218 FGVLLLKIVS 227
FG+LL ++ +
Sbjct: 201 FGILLTELTT 210
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 104/190 (54%), Gaps = 21/190 (11%)
Query: 55 KLGEGGFGPVYKGVLKNGDEIAVKRLSG---------RSGQGLRELKN-KLRLLGCCIDK 104
KLG+G FG V+ G +A+K L + Q ++++++ KL L + +
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKIRHEKLVQLYAVVSE 84
Query: 105 DEKILIYEYMPNKSL-DFFLFDWVTRVRIIE------GIAQGLLYLHQYSRVRIIHRDLK 157
+ ++ EYM SL DF + +R+ + IA G+ Y+ R+ +HRDL+
Sbjct: 85 EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLR 141
Query: 158 VSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVFS 217
+NIL+ +++ K++DFG+AR+ NE A G ++ +PE A+ G F+IKSDV+S
Sbjct: 142 AANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWS 200
Query: 218 FGVLLLKIVS 227
FG+LL ++ +
Sbjct: 201 FGILLTELTT 210
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 103/190 (54%), Gaps = 21/190 (11%)
Query: 55 KLGEGGFGPVYKGVLKNGDEIAVKRLSG---------RSGQGLRELKN-KLRLLGCCIDK 104
KLG+G FG V+ G +A+K L + Q +++L++ KL L + +
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 105 DEKILIYEYMPNKSL-DFFLFDWVTRVRIIE------GIAQGLLYLHQYSRVRIIHRDLK 157
+ ++ EYM L DF + +R+ + IA G+ Y+ R+ +HRDL+
Sbjct: 85 EPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLR 141
Query: 158 VSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVFS 217
+NIL+ +++ K++DFG+AR+ NE A G ++ +PE A+ G F+IKSDV+S
Sbjct: 142 AANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWS 200
Query: 218 FGVLLLKIVS 227
FG+LL ++ +
Sbjct: 201 FGILLTELTT 210
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 103/190 (54%), Gaps = 21/190 (11%)
Query: 55 KLGEGGFGPVYKGVLKNGDEIAVKRLSG---------RSGQGLRELKN-KLRLLGCCIDK 104
KLG+G FG V+ G +A+K L + Q +++L++ KL L + +
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 105 DEKILIYEYMPNKSL-DFFLFDWVTRVRIIE------GIAQGLLYLHQYSRVRIIHRDLK 157
+ ++ EYM L DF + +R+ + IA G+ Y+ R+ +HRDL+
Sbjct: 85 EPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLR 141
Query: 158 VSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVFS 217
+NIL+ +++ K++DFG+AR+ NE A G ++ +PE A+ G F+IKSDV+S
Sbjct: 142 AANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWS 200
Query: 218 FGVLLLKIVS 227
FG+LL ++ +
Sbjct: 201 FGILLTELTT 210
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 101/191 (52%), Gaps = 21/191 (10%)
Query: 54 NKLGEGGFGPVYKGVLKNGDEIAVKRLSGRS---------GQGLRELKN-KLRLLGCCID 103
+LG G FG V+ G ++AVK L S +++L++ +L L +
Sbjct: 19 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 78
Query: 104 KDEKILIYEYMPNKSL-DFFLFDWVTRVRI------IEGIAQGLLYLHQYSRVRIIHRDL 156
++ +I EYM N SL DF ++ I IA+G+ ++ + + IHRDL
Sbjct: 79 QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDL 135
Query: 157 KVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVF 216
+ +NIL+ ++ KI+DFG+AR+ NE A G ++ +PE G F+IKSDV+
Sbjct: 136 RAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI-KWTAPEAINYGTFTIKSDVW 194
Query: 217 SFGVLLLKIVS 227
SFG+LL +IV+
Sbjct: 195 SFGILLTEIVT 205
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 101/191 (52%), Gaps = 21/191 (10%)
Query: 54 NKLGEGGFGPVYKGVLKNGDEIAVKRLSGRS---------GQGLRELKN-KLRLLGCCID 103
+LG G FG V+ G ++AVK L S +++L++ +L L +
Sbjct: 25 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 84
Query: 104 KDEKILIYEYMPNKSL-DFFLFDWVTRVRI------IEGIAQGLLYLHQYSRVRIIHRDL 156
++ +I EYM N SL DF ++ I IA+G+ ++ + + IHRDL
Sbjct: 85 QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDL 141
Query: 157 KVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVF 216
+ +NIL+ ++ KI+DFG+AR+ NE A G ++ +PE G F+IKSDV+
Sbjct: 142 RAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI-KWTAPEAINYGTFTIKSDVW 200
Query: 217 SFGVLLLKIVS 227
SFG+LL +IV+
Sbjct: 201 SFGILLTEIVT 211
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 101/191 (52%), Gaps = 21/191 (10%)
Query: 54 NKLGEGGFGPVYKGVLKNGDEIAVKRLSGRS---------GQGLRELKN-KLRLLGCCID 103
+LG G FG V+ G ++AVK L S +++L++ +L L +
Sbjct: 19 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 78
Query: 104 KDEKILIYEYMPNKSL-DFFLFDWVTRVRI------IEGIAQGLLYLHQYSRVRIIHRDL 156
++ +I EYM N SL DF ++ I IA+G+ ++ + + IHRDL
Sbjct: 79 QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDL 135
Query: 157 KVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVF 216
+ +NIL+ ++ KI+DFG+AR+ NE A G ++ +PE G F+IKSDV+
Sbjct: 136 RAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI-KWTAPEAINYGTFTIKSDVW 194
Query: 217 SFGVLLLKIVS 227
SFG+LL +IV+
Sbjct: 195 SFGILLTEIVT 205
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 101/191 (52%), Gaps = 21/191 (10%)
Query: 54 NKLGEGGFGPVYKGVLKNGDEIAVKRLSGRS---------GQGLRELKN-KLRLLGCCID 103
+LG G FG V+ G ++AVK L S +++L++ +L L +
Sbjct: 21 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 80
Query: 104 KDEKILIYEYMPNKSL-DFFLFDWVTRVRI------IEGIAQGLLYLHQYSRVRIIHRDL 156
++ +I EYM N SL DF ++ I IA+G+ ++ + + IHRDL
Sbjct: 81 QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDL 137
Query: 157 KVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVF 216
+ +NIL+ ++ KI+DFG+AR+ NE A G ++ +PE G F+IKSDV+
Sbjct: 138 RAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI-KWTAPEAINYGTFTIKSDVW 196
Query: 217 SFGVLLLKIVS 227
SFG+LL +IV+
Sbjct: 197 SFGILLTEIVT 207
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 101/191 (52%), Gaps = 21/191 (10%)
Query: 54 NKLGEGGFGPVYKGVLKNGDEIAVKRLSGRS---------GQGLRELKN-KLRLLGCCID 103
+LG G FG V+ G ++AVK L S +++L++ +L L +
Sbjct: 24 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 83
Query: 104 KDEKILIYEYMPNKSL-DFFLFDWVTRVRI------IEGIAQGLLYLHQYSRVRIIHRDL 156
++ +I EYM N SL DF ++ I IA+G+ ++ + + IHRDL
Sbjct: 84 QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDL 140
Query: 157 KVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVF 216
+ +NIL+ ++ KI+DFG+AR+ NE A G ++ +PE G F+IKSDV+
Sbjct: 141 RAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI-KWTAPEAINYGTFTIKSDVW 199
Query: 217 SFGVLLLKIVS 227
SFG+LL +IV+
Sbjct: 200 SFGILLTEIVT 210
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 101/191 (52%), Gaps = 21/191 (10%)
Query: 54 NKLGEGGFGPVYKGVLKNGDEIAVKRLSGRS---------GQGLRELKN-KLRLLGCCID 103
+LG G FG V+ G ++AVK L S +++L++ +L L +
Sbjct: 20 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 79
Query: 104 KDEKILIYEYMPNKSL-DFFLFDWVTRVRI------IEGIAQGLLYLHQYSRVRIIHRDL 156
++ +I EYM N SL DF ++ I IA+G+ ++ + + IHRDL
Sbjct: 80 QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDL 136
Query: 157 KVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVF 216
+ +NIL+ ++ KI+DFG+AR+ NE A G ++ +PE G F+IKSDV+
Sbjct: 137 RAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI-KWTAPEAINYGTFTIKSDVW 195
Query: 217 SFGVLLLKIVS 227
SFG+LL +IV+
Sbjct: 196 SFGILLTEIVT 206
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 101/191 (52%), Gaps = 21/191 (10%)
Query: 54 NKLGEGGFGPVYKGVLKNGDEIAVKRLSGRS---------GQGLRELKN-KLRLLGCCID 103
+LG G FG V+ G ++AVK L S +++L++ +L L +
Sbjct: 14 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 73
Query: 104 KDEKILIYEYMPNKSL-DFFLFDWVTRVRI------IEGIAQGLLYLHQYSRVRIIHRDL 156
++ +I EYM N SL DF ++ I IA+G+ ++ + + IHRDL
Sbjct: 74 QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDL 130
Query: 157 KVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVF 216
+ +NIL+ ++ KI+DFG+AR+ NE A G ++ +PE G F+IKSDV+
Sbjct: 131 RAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI-KWTAPEAINYGTFTIKSDVW 189
Query: 217 SFGVLLLKIVS 227
SFG+LL +IV+
Sbjct: 190 SFGILLTEIVT 200
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 101/191 (52%), Gaps = 21/191 (10%)
Query: 54 NKLGEGGFGPVYKGVLKNGDEIAVKRLSGRS---------GQGLRELKN-KLRLLGCCID 103
+LG G FG V+ G ++AVK L S +++L++ +L L +
Sbjct: 19 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 78
Query: 104 KDEKILIYEYMPNKSL-DFFLFDWVTRVRI------IEGIAQGLLYLHQYSRVRIIHRDL 156
++ +I EYM N SL DF ++ I IA+G+ ++ + + IHRDL
Sbjct: 79 QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDL 135
Query: 157 KVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVF 216
+ +NIL+ ++ KI+DFG+AR+ NE A G ++ +PE G F+IKSDV+
Sbjct: 136 RAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI-KWTAPEAINYGTFTIKSDVW 194
Query: 217 SFGVLLLKIVS 227
SFG+LL +IV+
Sbjct: 195 SFGILLTEIVT 205
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 101/191 (52%), Gaps = 21/191 (10%)
Query: 54 NKLGEGGFGPVYKGVLKNGDEIAVKRLSGRS---------GQGLRELKN-KLRLLGCCID 103
+LG G FG V+ G ++AVK L S +++L++ +L L +
Sbjct: 29 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 88
Query: 104 KDEKILIYEYMPNKSL-DFFLFDWVTRVRI------IEGIAQGLLYLHQYSRVRIIHRDL 156
++ +I EYM N SL DF ++ I IA+G+ ++ + + IHRDL
Sbjct: 89 QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDL 145
Query: 157 KVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVF 216
+ +NIL+ ++ KI+DFG+AR+ NE A G ++ +PE G F+IKSDV+
Sbjct: 146 RAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI-KWTAPEAINYGTFTIKSDVW 204
Query: 217 SFGVLLLKIVS 227
SFG+LL +IV+
Sbjct: 205 SFGILLTEIVT 215
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 101/191 (52%), Gaps = 21/191 (10%)
Query: 54 NKLGEGGFGPVYKGVLKNGDEIAVKRLSGRS---------GQGLRELKN-KLRLLGCCID 103
+LG G FG V+ G ++AVK L S +++L++ +L L +
Sbjct: 25 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 84
Query: 104 KDEKILIYEYMPNKSL-DFFLFDWVTRVRI------IEGIAQGLLYLHQYSRVRIIHRDL 156
++ +I EYM N SL DF ++ I IA+G+ ++ + + IHRDL
Sbjct: 85 QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDL 141
Query: 157 KVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVF 216
+ +NIL+ ++ KI+DFG+AR+ NE A G ++ +PE G F+IKSDV+
Sbjct: 142 RAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI-KWTAPEAINYGTFTIKSDVW 200
Query: 217 SFGVLLLKIVS 227
SFG+LL +IV+
Sbjct: 201 SFGILLTEIVT 211
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 101/191 (52%), Gaps = 21/191 (10%)
Query: 54 NKLGEGGFGPVYKGVLKNGDEIAVKRLSGRS---------GQGLRELKN-KLRLLGCCID 103
+LG G FG V+ G ++AVK L S +++L++ +L L +
Sbjct: 28 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 87
Query: 104 KDEKILIYEYMPNKSL-DFFLFDWVTRVRI------IEGIAQGLLYLHQYSRVRIIHRDL 156
++ +I EYM N SL DF ++ I IA+G+ ++ + + IHRDL
Sbjct: 88 QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDL 144
Query: 157 KVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVF 216
+ +NIL+ ++ KI+DFG+AR+ NE A G ++ +PE G F+IKSDV+
Sbjct: 145 RAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF-PIKWTAPEAINYGTFTIKSDVW 203
Query: 217 SFGVLLLKIVS 227
SFG+LL +IV+
Sbjct: 204 SFGILLTEIVT 214
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 101/191 (52%), Gaps = 21/191 (10%)
Query: 54 NKLGEGGFGPVYKGVLKNGDEIAVKRLSGRS---------GQGLRELKN-KLRLLGCCID 103
+LG G FG V+ G ++AVK L S +++L++ +L L +
Sbjct: 27 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 86
Query: 104 KDEKILIYEYMPNKSL-DFFLFDWVTRVRI------IEGIAQGLLYLHQYSRVRIIHRDL 156
++ +I EYM N SL DF ++ I IA+G+ ++ + + IHRDL
Sbjct: 87 QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDL 143
Query: 157 KVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVF 216
+ +NIL+ ++ KI+DFG+AR+ NE A G ++ +PE G F+IKSDV+
Sbjct: 144 RAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF-PIKWTAPEAINYGTFTIKSDVW 202
Query: 217 SFGVLLLKIVS 227
SFG+LL +IV+
Sbjct: 203 SFGILLTEIVT 213
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 99/191 (51%), Gaps = 21/191 (10%)
Query: 54 NKLGEGGFGPVYKGVLKNGDEIAVKRLSGRS---------GQGLRELK-NKLRLLGCCID 103
KLG G FG V+ ++AVK + S ++ L+ +KL L +
Sbjct: 21 KKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT 80
Query: 104 KDEKILIYEYMPNKSL-DFFLFDWVTR------VRIIEGIAQGLLYLHQYSRVRIIHRDL 156
K+ +I E+M SL DF D ++ + IA+G+ ++ Q + IHRDL
Sbjct: 81 KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN---YIHRDL 137
Query: 157 KVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVF 216
+ +NIL+ + KI+DFG+AR+ NE A G ++ +PE G F+IKSDV+
Sbjct: 138 RAANILVSASLVCKIADFGLARVIEDNEYTAREGAKF-PIKWTAPEAINFGSFTIKSDVW 196
Query: 217 SFGVLLLKIVS 227
SFG+LL++IV+
Sbjct: 197 SFGILLMEIVT 207
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 99/191 (51%), Gaps = 21/191 (10%)
Query: 54 NKLGEGGFGPVYKGVLKNGDEIAVKRLSGRS---------GQGLRELK-NKLRLLGCCID 103
KLG G FG V+ ++AVK + S ++ L+ +KL L +
Sbjct: 194 KKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT 253
Query: 104 KDEKILIYEYMPNKSL-DFFLFDWVTR------VRIIEGIAQGLLYLHQYSRVRIIHRDL 156
K+ +I E+M SL DF D ++ + IA+G+ ++ Q + IHRDL
Sbjct: 254 KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN---YIHRDL 310
Query: 157 KVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVF 216
+ +NIL+ + KI+DFG+AR+ NE A G ++ +PE G F+IKSDV+
Sbjct: 311 RAANILVSASLVCKIADFGLARVIEDNEYTAREGAKF-PIKWTAPEAINFGSFTIKSDVW 369
Query: 217 SFGVLLLKIVS 227
SFG+LL++IV+
Sbjct: 370 SFGILLMEIVT 380
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 101/191 (52%), Gaps = 21/191 (10%)
Query: 54 NKLGEGGFGPVYKGVLKNGDEIAVKRLSGRS---------GQGLRELKN-KLRLLGCCID 103
+LG G FG V+ G ++AVK L S +++L++ +L L +
Sbjct: 15 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 74
Query: 104 KDEKILIYEYMPNKSL-DFFLFDWVTRVRI------IEGIAQGLLYLHQYSRVRIIHRDL 156
++ +I EYM N SL DF ++ I IA+G+ ++ + + IHR+L
Sbjct: 75 QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRNL 131
Query: 157 KVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVF 216
+ +NIL+ ++ KI+DFG+AR+ NE A G ++ +PE G F+IKSDV+
Sbjct: 132 RAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKF-PIKWTAPEAINYGTFTIKSDVW 190
Query: 217 SFGVLLLKIVS 227
SFG+LL +IV+
Sbjct: 191 SFGILLTEIVT 201
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 100/199 (50%), Gaps = 32/199 (16%)
Query: 56 LGEGGFGPVYKGVLKNGD-----EIAVKRLS------------GRSG-QGLRELKNKLRL 97
+G G FG VYKG+LK +A+K L G +G G N +RL
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRL 111
Query: 98 LGCCIDKDEKILIYEYMPNKSLDFFL------FDWVTRVRIIEGIAQGLLYLHQYSRVRI 151
G ++I EYM N +LD FL F + V ++ GIA G+ YL + +
Sbjct: 112 EGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYL---ANMNY 168
Query: 152 IHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANT---GRIVGTYRYMSPEYAIQGI 208
+HRDL NIL++ ++ K+SDFG++R+ + T G+I R+ +PE
Sbjct: 169 VHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKI--PIRWTAPEAISYRK 226
Query: 209 FSIKSDVFSFGVLLLKIVS 227
F+ SDV+SFG+++ ++++
Sbjct: 227 FTSASDVWSFGIVMWEVMT 245
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 99/209 (47%), Gaps = 47/209 (22%)
Query: 56 LGEGGFGPVYKGVLKNGDEIAVKRLSGRSGQGLRELKNKLR----------------LLG 99
+G GGFG VY+ GDE+AVK + + + +R L G
Sbjct: 15 IGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRG 73
Query: 100 CCIDKDEKILIYEYMPNKSLDF----------FLFDWVTRVRIIEGIAQGLLYLHQYSRV 149
C+ + L+ E+ L+ L +W + IA+G+ YLH + V
Sbjct: 74 VCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQ------IARGMNYLHDEAIV 127
Query: 150 RIIHRDLKVSNILLDKDMNP--------KISDFGIAR-ICRGNELQANTGRIVGTYRYMS 200
IIHRDLK SNIL+ + + KI+DFG+AR R ++ A G Y +M+
Sbjct: 128 PIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSA-----AGAYAWMA 182
Query: 201 PEYAIQGIFSIKSDVFSFGVLLLKIVSGK 229
PE +FS SDV+S+GVLL ++++G+
Sbjct: 183 PEVIRASMFSKGSDVWSYGVLLWELLTGE 211
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 96/194 (49%), Gaps = 25/194 (12%)
Query: 54 NKLGEGGFGPVYKGVLKNGD-EIAVKRLSG---------RSGQGLRELK--NKLRLLGCC 101
+KLG G +G VY GV K +AVK L + ++E+K N ++LLG C
Sbjct: 38 HKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 97
Query: 102 IDKDEKILIYEYMPNKSLDFFLFDWVTRVRIIEGIAQGLLYL--------HQYSRVRIIH 153
+ ++ EYMP +L D++ E A LLY+ + IH
Sbjct: 98 TLEPPFYIVTEYMPYGNL----LDYLRECNREEVTAVVLLYMATQISSAMEYLEKKNFIH 153
Query: 154 RDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKS 213
RDL N L+ ++ K++DFG++R+ G+ A+ G ++ +PE FSIKS
Sbjct: 154 RDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNTFSIKS 212
Query: 214 DVFSFGVLLLKIVS 227
DV++FGVLL +I +
Sbjct: 213 DVWAFGVLLWEIAT 226
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 107/217 (49%), Gaps = 32/217 (14%)
Query: 37 LFSFSSVSTATNKFSDANKLGEGGFGPVYKGVLK--NGDEIAV-------------KR-- 79
+ F+ ATN S +G G FG V G LK + EI+V +R
Sbjct: 35 VHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 80 LSGRSGQGLRELKNKLRLLGCCIDKDEKILIYEYMPNKSLDFFL------FDWVTRVRII 133
L S G + N +RL G +++ EYM N SLD FL F + V ++
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML 153
Query: 134 EGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANT---G 190
GIA G+ YL S + +HRDL NIL++ ++ K+SDFG+AR+ + A T G
Sbjct: 154 RGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGG 210
Query: 191 RIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVS 227
+I R+ SPE F+ SDV+S+G++L +++S
Sbjct: 211 KI--PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 99/191 (51%), Gaps = 21/191 (10%)
Query: 54 NKLGEGGFGPVYKGVLKNGDEIAVKRLSGRS---------GQGLRELKN-KLRLLGCCID 103
+LG G G V+ G ++AVK L S +++L++ +L L +
Sbjct: 19 ERLGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 78
Query: 104 KDEKILIYEYMPNKSL-DFFLFDWVTRVRI------IEGIAQGLLYLHQYSRVRIIHRDL 156
++ +I EYM N SL DF ++ I IA+G+ ++ + + IHRDL
Sbjct: 79 QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDL 135
Query: 157 KVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVF 216
+ +NIL+ ++ KI+DFG+AR+ E A G ++ +PE G F+IKSDV+
Sbjct: 136 RAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKF-PIKWTAPEAINYGTFTIKSDVW 194
Query: 217 SFGVLLLKIVS 227
SFG+LL +IV+
Sbjct: 195 SFGILLTEIVT 205
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 100/198 (50%), Gaps = 31/198 (15%)
Query: 56 LGEGGFGPVYKGVLK--NGDEIAV-------------KR--LSGRSGQGLRELKNKLRLL 98
+G G FG V G LK + EI+V +R L S G + N +RL
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 99 GCCIDKDEKILIYEYMPNKSLDFFL------FDWVTRVRIIEGIAQGLLYLHQYSRVRII 152
G +++ EYM N SLD FL F + V ++ GIA G+ YL S + +
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGFV 169
Query: 153 HRDLKVSNILLDKDMNPKISDFGIARICRGNELQANT---GRIVGTYRYMSPEYAIQGIF 209
HRDL NIL++ ++ K+SDFG++R+ + A T G+I R+ SPE F
Sbjct: 170 HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI--PIRWTSPEAIAYRKF 227
Query: 210 SIKSDVFSFGVLLLKIVS 227
+ SDV+S+G++L +++S
Sbjct: 228 TSASDVWSYGIVLWEVMS 245
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 107/217 (49%), Gaps = 32/217 (14%)
Query: 37 LFSFSSVSTATNKFSDANKLGEGGFGPVYKGVLK--NGDEIAV-------------KR-- 79
+ F+ ATN S +G G FG V G LK + EI+V +R
Sbjct: 23 VHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 81
Query: 80 LSGRSGQGLRELKNKLRLLGCCIDKDEKILIYEYMPNKSLDFFL------FDWVTRVRII 133
L S G + N +RL G +++ EYM N SLD FL F + V ++
Sbjct: 82 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML 141
Query: 134 EGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANT---G 190
GIA G+ YL S + +HRDL NIL++ ++ K+SDFG++R+ + A T G
Sbjct: 142 RGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 198
Query: 191 RIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVS 227
+I R+ SPE F+ SDV+S+G++L +++S
Sbjct: 199 KI--PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 233
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 100/198 (50%), Gaps = 31/198 (15%)
Query: 56 LGEGGFGPVYKGVLK--NGDEIAV-------------KR--LSGRSGQGLRELKNKLRLL 98
+G G FG V G LK + EI+V +R L S G + N +RL
Sbjct: 24 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 83
Query: 99 GCCIDKDEKILIYEYMPNKSLDFFL------FDWVTRVRIIEGIAQGLLYLHQYSRVRII 152
G +++ EYM N SLD FL F + V ++ GIA G+ YL S + +
Sbjct: 84 GVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGYV 140
Query: 153 HRDLKVSNILLDKDMNPKISDFGIARICRGNELQANT---GRIVGTYRYMSPEYAIQGIF 209
HRDL NIL++ ++ K+SDFG++R+ + A T G+I R+ SPE F
Sbjct: 141 HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI--PIRWTSPEAIAYRKF 198
Query: 210 SIKSDVFSFGVLLLKIVS 227
+ SDV+S+G++L +++S
Sbjct: 199 TSASDVWSYGIVLWEVMS 216
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 107/217 (49%), Gaps = 32/217 (14%)
Query: 37 LFSFSSVSTATNKFSDANKLGEGGFGPVYKGVLK--NGDEIAV-------------KR-- 79
+ F+ ATN S +G G FG V G LK + EI+V +R
Sbjct: 33 VHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 91
Query: 80 LSGRSGQGLRELKNKLRLLGCCIDKDEKILIYEYMPNKSLDFFL------FDWVTRVRII 133
L S G + N +RL G +++ EYM N SLD FL F + V ++
Sbjct: 92 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML 151
Query: 134 EGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANT---G 190
GIA G+ YL S + +HRDL NIL++ ++ K+SDFG++R+ + A T G
Sbjct: 152 RGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 208
Query: 191 RIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVS 227
+I R+ SPE F+ SDV+S+G++L +++S
Sbjct: 209 KI--PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 243
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 107/217 (49%), Gaps = 32/217 (14%)
Query: 37 LFSFSSVSTATNKFSDANKLGEGGFGPVYKGVLK--NGDEIAV-------------KR-- 79
+ F+ ATN S +G G FG V G LK + EI+V +R
Sbjct: 35 VHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 80 LSGRSGQGLRELKNKLRLLGCCIDKDEKILIYEYMPNKSLDFFL------FDWVTRVRII 133
L S G + N +RL G +++ EYM N SLD FL F + V ++
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML 153
Query: 134 EGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANT---G 190
GIA G+ YL S + +HRDL NIL++ ++ K+SDFG++R+ + A T G
Sbjct: 154 RGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 210
Query: 191 RIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVS 227
+I R+ SPE F+ SDV+S+G++L +++S
Sbjct: 211 KI--PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 107/217 (49%), Gaps = 32/217 (14%)
Query: 37 LFSFSSVSTATNKFSDANKLGEGGFGPVYKGVLK--NGDEIAV-------------KR-- 79
+ F+ ATN S +G G FG V G LK + EI+V +R
Sbjct: 35 VHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 80 LSGRSGQGLRELKNKLRLLGCCIDKDEKILIYEYMPNKSLDFFL------FDWVTRVRII 133
L S G + N +RL G +++ EYM N SLD FL F + V ++
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML 153
Query: 134 EGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANT---G 190
GIA G+ YL S + +HRDL NIL++ ++ K+SDFG++R+ + A T G
Sbjct: 154 RGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 210
Query: 191 RIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVS 227
+I R+ SPE F+ SDV+S+G++L +++S
Sbjct: 211 KI--PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 107/217 (49%), Gaps = 32/217 (14%)
Query: 37 LFSFSSVSTATNKFSDANKLGEGGFGPVYKGVLK--NGDEIAV-------------KR-- 79
+ F+ ATN S +G G FG V G LK + EI+V +R
Sbjct: 35 VHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 80 LSGRSGQGLRELKNKLRLLGCCIDKDEKILIYEYMPNKSLDFFL------FDWVTRVRII 133
L S G + N +RL G +++ EYM N SLD FL F + V ++
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML 153
Query: 134 EGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANT---G 190
GIA G+ YL S + +HRDL NIL++ ++ K+SDFG++R+ + A T G
Sbjct: 154 RGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 210
Query: 191 RIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVS 227
+I R+ SPE F+ SDV+S+G++L +++S
Sbjct: 211 KI--PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 100/198 (50%), Gaps = 31/198 (15%)
Query: 56 LGEGGFGPVYKGVLK--NGDEIAV-------------KR--LSGRSGQGLRELKNKLRLL 98
+G G FG V G LK + EI+V +R L S G + N +RL
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 99 GCCIDKDEKILIYEYMPNKSLDFFL------FDWVTRVRIIEGIAQGLLYLHQYSRVRII 152
G +++ EYM N SLD FL F + V ++ GIA G+ YL S + +
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGYV 169
Query: 153 HRDLKVSNILLDKDMNPKISDFGIARICRGNELQANT---GRIVGTYRYMSPEYAIQGIF 209
HRDL NIL++ ++ K+SDFG++R+ + A T G+I R+ SPE F
Sbjct: 170 HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI--PIRWTSPEAIAYRKF 227
Query: 210 SIKSDVFSFGVLLLKIVS 227
+ SDV+S+G++L +++S
Sbjct: 228 TSASDVWSYGIVLWEVMS 245
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 101/199 (50%), Gaps = 27/199 (13%)
Query: 53 ANKLGEGGFGPVYKGVLKNGDEIAVKRL--SGRSGQGLRELKNKLRLLGCCID------- 103
++G G FG VYKG K ++AVK L + + Q L+ KN++ +L
Sbjct: 13 GQRIGSGSFGTVYKG--KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 70
Query: 104 ----KDEKILIYEYMPNKSLDFFL------FDWVTRVRIIEGIAQGLLYLHQYSRVRIIH 153
K + ++ ++ SL L F+ + + I AQG+ YLH S IIH
Sbjct: 71 GYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIH 127
Query: 154 RDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPE---YAIQGIFS 210
RDLK +NI L +D+ KI DFG+A + ++ G+ +M+PE + +S
Sbjct: 128 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 187
Query: 211 IKSDVFSFGVLLLKIVSGK 229
+SDV++FG++L ++++G+
Sbjct: 188 FQSDVYAFGIVLYELMTGQ 206
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 101/199 (50%), Gaps = 27/199 (13%)
Query: 53 ANKLGEGGFGPVYKGVLKNGDEIAVKRL--SGRSGQGLRELKNKLRLLGCCID------- 103
++G G FG VYKG K ++AVK L + + Q L+ KN++ +L
Sbjct: 18 GQRIGSGSFGTVYKG--KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 75
Query: 104 ----KDEKILIYEYMPNKSLDFFL------FDWVTRVRIIEGIAQGLLYLHQYSRVRIIH 153
K + ++ ++ SL L F+ + + I AQG+ YLH S IIH
Sbjct: 76 GYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIH 132
Query: 154 RDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPE---YAIQGIFS 210
RDLK +NI L +D+ KI DFG+A + ++ G+ +M+PE + +S
Sbjct: 133 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 192
Query: 211 IKSDVFSFGVLLLKIVSGK 229
+SDV++FG++L ++++G+
Sbjct: 193 FQSDVYAFGIVLYELMTGQ 211
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 101/199 (50%), Gaps = 27/199 (13%)
Query: 53 ANKLGEGGFGPVYKGVLKNGDEIAVKRL--SGRSGQGLRELKNKLRLLGCCID------- 103
++G G FG VYKG K ++AVK L + + Q L+ KN++ +L
Sbjct: 15 GQRIGSGSFGTVYKG--KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 72
Query: 104 ----KDEKILIYEYMPNKSLDFFL------FDWVTRVRIIEGIAQGLLYLHQYSRVRIIH 153
K + ++ ++ SL L F+ + + I AQG+ YLH S IIH
Sbjct: 73 GYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIH 129
Query: 154 RDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPE---YAIQGIFS 210
RDLK +NI L +D+ KI DFG+A + ++ G+ +M+PE + +S
Sbjct: 130 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 189
Query: 211 IKSDVFSFGVLLLKIVSGK 229
+SDV++FG++L ++++G+
Sbjct: 190 FQSDVYAFGIVLYELMTGQ 208
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 101/199 (50%), Gaps = 27/199 (13%)
Query: 53 ANKLGEGGFGPVYKGVLKNGDEIAVKRL--SGRSGQGLRELKNKLRLLGCCID------- 103
++G G FG VYKG K ++AVK L + + Q L+ KN++ +L
Sbjct: 18 GQRIGSGSFGTVYKG--KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 75
Query: 104 ----KDEKILIYEYMPNKSLDFFL------FDWVTRVRIIEGIAQGLLYLHQYSRVRIIH 153
K + ++ ++ SL L F+ + + I AQG+ YLH S IIH
Sbjct: 76 GYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIH 132
Query: 154 RDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPE---YAIQGIFS 210
RDLK +NI L +D+ KI DFG+A + ++ G+ +M+PE + +S
Sbjct: 133 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 192
Query: 211 IKSDVFSFGVLLLKIVSGK 229
+SDV++FG++L ++++G+
Sbjct: 193 FQSDVYAFGIVLYELMTGQ 211
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 106/217 (48%), Gaps = 32/217 (14%)
Query: 37 LFSFSSVSTATNKFSDANKLGEGGFGPVYKGVLK--NGDEIAV-------------KR-- 79
+ F+ ATN S +G G FG V G LK + EI+V +R
Sbjct: 35 VHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 80 LSGRSGQGLRELKNKLRLLGCCIDKDEKILIYEYMPNKSLDFFL------FDWVTRVRII 133
L S G + N +RL G +++ EYM N SLD FL F + V ++
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML 153
Query: 134 EGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANT---G 190
GIA G+ YL S + +HRDL NIL++ ++ K+SDFG+ R+ + A T G
Sbjct: 154 RGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGG 210
Query: 191 RIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVS 227
+I R+ SPE F+ SDV+S+G++L +++S
Sbjct: 211 KI--PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 99/194 (51%), Gaps = 21/194 (10%)
Query: 54 NKLGEGGFGPVYKGVLKNGDEIAVK--RLSGRSGQGL---RELKNKL------RLLGCCI 102
++G G FG V+ G N D++A+K R S + E+ KL +L G C+
Sbjct: 13 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 72
Query: 103 DKDEKILIYEYMPNKSLDFFL------FDWVTRVRIIEGIAQGLLYLHQYSRVRIIHRDL 156
++ L++E+M + L +L F T + + + +G+ YL + S +IHRDL
Sbjct: 73 EQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAS---VIHRDL 129
Query: 157 KVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVF 216
N L+ ++ K+SDFG+ R ++ ++TG ++ SPE +S KSDV+
Sbjct: 130 AARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV-KWASPEVFSFSRYSSKSDVW 188
Query: 217 SFGVLLLKIVSGKK 230
SFGVL+ ++ S K
Sbjct: 189 SFGVLMWEVFSEGK 202
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 101/199 (50%), Gaps = 27/199 (13%)
Query: 53 ANKLGEGGFGPVYKGVLKNGDEIAVKRL--SGRSGQGLRELKNKLRLLGCCID------- 103
++G G FG VYKG K ++AVK L + + Q L+ KN++ +L
Sbjct: 40 GQRIGSGSFGTVYKG--KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 97
Query: 104 ----KDEKILIYEYMPNKSLDFFL------FDWVTRVRIIEGIAQGLLYLHQYSRVRIIH 153
K + ++ ++ SL L F+ + + I AQG+ YLH S IIH
Sbjct: 98 GYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIH 154
Query: 154 RDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPE---YAIQGIFS 210
RDLK +NI L +D+ KI DFG+A + ++ G+ +M+PE + +S
Sbjct: 155 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 214
Query: 211 IKSDVFSFGVLLLKIVSGK 229
+SDV++FG++L ++++G+
Sbjct: 215 FQSDVYAFGIVLYELMTGQ 233
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 101/199 (50%), Gaps = 27/199 (13%)
Query: 53 ANKLGEGGFGPVYKGVLKNGDEIAVKRL--SGRSGQGLRELKNKLRLLGCCID------- 103
++G G FG VYKG K ++AVK L + + Q L+ KN++ +L
Sbjct: 41 GQRIGSGSFGTVYKG--KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 98
Query: 104 ----KDEKILIYEYMPNKSLDFFL------FDWVTRVRIIEGIAQGLLYLHQYSRVRIIH 153
K + ++ ++ SL L F+ + + I AQG+ YLH S IIH
Sbjct: 99 GYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIH 155
Query: 154 RDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPE---YAIQGIFS 210
RDLK +NI L +D+ KI DFG+A + ++ G+ +M+PE + +S
Sbjct: 156 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 215
Query: 211 IKSDVFSFGVLLLKIVSGK 229
+SDV++FG++L ++++G+
Sbjct: 216 FQSDVYAFGIVLYELMTGQ 234
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 102/203 (50%), Gaps = 29/203 (14%)
Query: 50 FSDANKLGEGGFGPVYKG-VLKNGDEIAVKRLSGRS---GQGLRELKNKLRLLGCCIDKD 105
F N LG+G F VY+ + G E+A+K + ++ ++ ++N++++ C +
Sbjct: 13 FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKI-HCQLKHP 71
Query: 106 EKILIYEYMPNKSLDFFLFDWV----------TRVR---------IIEGIAQGLLYLHQY 146
+ +Y Y + + + + + RV+ + I G+LYLH +
Sbjct: 72 SILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSH 131
Query: 147 SRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQ 206
I+HRDL +SN+LL ++MN KI+DFG+A + + T + GT Y+SPE A +
Sbjct: 132 G---ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT--LCGTPNYISPEIATR 186
Query: 207 GIFSIKSDVFSFGVLLLKIVSGK 229
++SDV+S G + ++ G+
Sbjct: 187 SAHGLESDVWSLGCMFYTLLIGR 209
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 104/203 (51%), Gaps = 35/203 (17%)
Query: 53 ANKLGEGGFGPVYKGVLKNGDEIAVKRL--SGRSGQGLRELKNKLRLLGCCID------- 103
++G G FG VYKG K ++AVK L + + Q L+ KN++ +L
Sbjct: 13 GQRIGSGSFGTVYKG--KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 70
Query: 104 ----KDEKILIYEYMPNKSLDFFL------FDWVTRVRIIEGIAQGLLYLHQYSRVRIIH 153
K + ++ ++ SL L F+ + + I AQG+ YLH S IIH
Sbjct: 71 GYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIH 127
Query: 154 RDLKVSNILLDKDMNPKISDFGIA----RICRGNELQANTGRIVGTYRYMSPE---YAIQ 206
RDLK +NI L +D+ KI DFG+A R ++ + +G I+ +M+PE +
Sbjct: 128 RDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSIL----WMAPEVIRMQDK 183
Query: 207 GIFSIKSDVFSFGVLLLKIVSGK 229
+S +SDV++FG++L ++++G+
Sbjct: 184 NPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 104/203 (51%), Gaps = 35/203 (17%)
Query: 53 ANKLGEGGFGPVYKGVLKNGDEIAVKRL--SGRSGQGLRELKNKLRLLGCCID------- 103
++G G FG VYKG K ++AVK L + + Q L+ KN++ +L
Sbjct: 33 GQRIGSGSFGTVYKG--KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 90
Query: 104 ----KDEKILIYEYMPNKSLDFFL------FDWVTRVRIIEGIAQGLLYLHQYSRVRIIH 153
K + ++ ++ SL L F+ + + I AQG+ YLH S IIH
Sbjct: 91 GYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIH 147
Query: 154 RDLKVSNILLDKDMNPKISDFGIA----RICRGNELQANTGRIVGTYRYMSPE---YAIQ 206
RDLK +NI L +D+ KI DFG+A R ++ + +G I+ +M+PE +
Sbjct: 148 RDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSIL----WMAPEVIRMQDK 203
Query: 207 GIFSIKSDVFSFGVLLLKIVSGK 229
+S +SDV++FG++L ++++G+
Sbjct: 204 NPYSFQSDVYAFGIVLYELMTGQ 226
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 96/194 (49%), Gaps = 25/194 (12%)
Query: 54 NKLGEGGFGPVYKGVLKNGD-EIAVKRLSG---------RSGQGLRELK--NKLRLLGCC 101
+KLG G FG VY+GV K +AVK L + ++E+K N ++LLG C
Sbjct: 17 HKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 76
Query: 102 IDKDEKILIYEYMPNKSLDFFLFDWVTRVRIIEGIAQGLLYL--------HQYSRVRIIH 153
+ +I E+M +L D++ E A LLY+ + IH
Sbjct: 77 TREPPFYIITEFMTYGNL----LDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH 132
Query: 154 RDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKS 213
RDL N L+ ++ K++DFG++R+ G+ A+ G ++ +PE FSIKS
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPI-KWTAPESLAYNKFSIKS 191
Query: 214 DVFSFGVLLLKIVS 227
DV++FGVLL +I +
Sbjct: 192 DVWAFGVLLWEIAT 205
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 104/203 (51%), Gaps = 35/203 (17%)
Query: 53 ANKLGEGGFGPVYKGVLKNGDEIAVKRL--SGRSGQGLRELKNKLRLLGCCID------- 103
++G G FG VYKG K ++AVK L + + Q L+ KN++ +L
Sbjct: 41 GQRIGSGSFGTVYKG--KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 98
Query: 104 ----KDEKILIYEYMPNKSLDFFL------FDWVTRVRIIEGIAQGLLYLHQYSRVRIIH 153
K + ++ ++ SL L F+ + + I AQG+ YLH S IIH
Sbjct: 99 GYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIH 155
Query: 154 RDLKVSNILLDKDMNPKISDFGIA----RICRGNELQANTGRIVGTYRYMSPE---YAIQ 206
RDLK +NI L +D+ KI DFG+A R ++ + +G I+ +M+PE +
Sbjct: 156 RDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSIL----WMAPEVIRMQDK 211
Query: 207 GIFSIKSDVFSFGVLLLKIVSGK 229
+S +SDV++FG++L ++++G+
Sbjct: 212 NPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 99/200 (49%), Gaps = 33/200 (16%)
Query: 56 LGEGGFGPVYKGVLKNGDE----IAVKRLSG-------------RSGQGLRELKNKLRLL 98
+G G FG V +G LK + +A+K L G S G E N +RL
Sbjct: 24 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 83
Query: 99 GCCIDKDEKILIYEYMPNKSLDFFL------FDWVTRVRIIEGIAQGLLYLHQYSRVRII 152
G + +++ E+M N +LD FL F + V ++ GIA G+ YL + S V
Sbjct: 84 GVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAEMSYV--- 140
Query: 153 HRDLKVSNILLDKDMNPKISDFGIARICRGN-----ELQANTGRIVGTYRYMSPEYAIQG 207
HRDL NIL++ ++ K+SDFG++R N E + G+I R+ +PE
Sbjct: 141 HRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKI--PIRWTAPEAIAFR 198
Query: 208 IFSIKSDVFSFGVLLLKIVS 227
F+ SD +S+G+++ +++S
Sbjct: 199 KFTSASDAWSYGIVMWEVMS 218
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 98/193 (50%), Gaps = 23/193 (11%)
Query: 54 NKLGEGGFGPVYKGVLKNGD-EIAVKRLSG---------RSGQGLRELK--NKLRLLGCC 101
+KLG G +G VY+GV K +AVK L + ++E+K N ++LLG C
Sbjct: 24 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 83
Query: 102 IDKDEKILIYEYMPNKSLDFFL-------FDWVTRVRIIEGIAQGLLYLHQYSRVRIIHR 154
+ +I E+M +L +L + V + + I+ + YL + IHR
Sbjct: 84 TREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL---EKKNFIHR 140
Query: 155 DLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKSD 214
DL N L+ ++ K++DFG++R+ G+ A+ G ++ +PE FSIKSD
Sbjct: 141 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSIKSD 199
Query: 215 VFSFGVLLLKIVS 227
V++FGVLL +I +
Sbjct: 200 VWAFGVLLWEIAT 212
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 102/201 (50%), Gaps = 31/201 (15%)
Query: 53 ANKLGEGGFGPVYKGVLKNGDEIAVKRL--SGRSGQGLRELKNKLRLLGCCIDKDEKILI 110
++G G FG VYKG K ++AVK L + + Q L+ KN++ +L + IL+
Sbjct: 13 GQRIGSGSFGTVYKG--KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT--RHVNILL 68
Query: 111 Y-------------EYMPNKSLDFFL------FDWVTRVRIIEGIAQGLLYLHQYSRVRI 151
+ ++ SL L F+ + + I AQG+ YLH S I
Sbjct: 69 FMGYSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---I 125
Query: 152 IHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPE---YAIQGI 208
IHRDLK +NI L +D+ KI DFG+A + ++ G+ +M+PE +
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 185
Query: 209 FSIKSDVFSFGVLLLKIVSGK 229
+S +SDV++FG++L ++++G+
Sbjct: 186 YSFQSDVYAFGIVLYELMTGQ 206
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 98/193 (50%), Gaps = 23/193 (11%)
Query: 54 NKLGEGGFGPVYKGVLKNGD-EIAVKRLSG---------RSGQGLRELK--NKLRLLGCC 101
+KLG G +G VY+GV K +AVK L + ++E+K N ++LLG C
Sbjct: 24 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 83
Query: 102 IDKDEKILIYEYMPNKSLDFFL-------FDWVTRVRIIEGIAQGLLYLHQYSRVRIIHR 154
+ +I E+M +L +L + V + + I+ + YL + IHR
Sbjct: 84 TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL---EKKNFIHR 140
Query: 155 DLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKSD 214
DL N L+ ++ K++DFG++R+ G+ A+ G ++ +PE FSIKSD
Sbjct: 141 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSIKSD 199
Query: 215 VFSFGVLLLKIVS 227
V++FGVLL +I +
Sbjct: 200 VWAFGVLLWEIAT 212
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 110/233 (47%), Gaps = 37/233 (15%)
Query: 50 FSDANKLGEGGFGPVYKGV-LKNGDEIAVKRLS---GRSGQGLRELKNKLRLL------- 98
FSD ++G G FG VY ++N + +A+K++S +S + +++ ++R L
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 99 -----GCCIDKDEKILIYEYMPNKSLDFF-----LFDWVTRVRIIEGIAQGLLYLHQYSR 148
GC + + L+ EY + D V + G QGL YLH ++
Sbjct: 116 TIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHN- 174
Query: 149 VRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAI--- 205
+IHRD+K NILL + K+ DFG A I A VGT +M+PE +
Sbjct: 175 --MIHRDVKAGNILLSEPGLVKLGDFGSASIM------APANXFVGTPYWMAPEVILAMD 226
Query: 206 QGIFSIKSDVFSFGVLLLKIVSGKKTTGFYRTYSFTLLGYISENIYEFPSVDT 258
+G + K DV+S G+ +++ K + + + L +I++N E P++ +
Sbjct: 227 EGQYDGKVDVWSLGITCIELAERKPP--LFNMNAMSALYHIAQN--ESPALQS 275
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 98/193 (50%), Gaps = 23/193 (11%)
Query: 54 NKLGEGGFGPVYKGVLKNGD-EIAVKRLSG---------RSGQGLRELK--NKLRLLGCC 101
+KLG G +G VY+GV K +AVK L + ++E+K N ++LLG C
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 78
Query: 102 IDKDEKILIYEYMPNKSLDFFL-------FDWVTRVRIIEGIAQGLLYLHQYSRVRIIHR 154
+ +I E+M +L +L + V + + I+ + YL + IHR
Sbjct: 79 TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL---EKKNFIHR 135
Query: 155 DLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKSD 214
DL N L+ ++ K++DFG++R+ G+ A+ G ++ +PE FSIKSD
Sbjct: 136 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSIKSD 194
Query: 215 VFSFGVLLLKIVS 227
V++FGVLL +I +
Sbjct: 195 VWAFGVLLWEIAT 207
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 110/233 (47%), Gaps = 37/233 (15%)
Query: 50 FSDANKLGEGGFGPVYKGV-LKNGDEIAVKRLS---GRSGQGLRELKNKLRLL------- 98
FSD ++G G FG VY ++N + +A+K++S +S + +++ ++R L
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 99 -----GCCIDKDEKILIYEYMPNKSLDFF-----LFDWVTRVRIIEGIAQGLLYLHQYSR 148
GC + + L+ EY + D V + G QGL YLH ++
Sbjct: 77 TIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHN- 135
Query: 149 VRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAI--- 205
+IHRD+K NILL + K+ DFG A I A VGT +M+PE +
Sbjct: 136 --MIHRDVKAGNILLSEPGLVKLGDFGSASIM------APANXFVGTPYWMAPEVILAMD 187
Query: 206 QGIFSIKSDVFSFGVLLLKIVSGKKTTGFYRTYSFTLLGYISENIYEFPSVDT 258
+G + K DV+S G+ +++ K + + + L +I++N E P++ +
Sbjct: 188 EGQYDGKVDVWSLGITCIELAERKPP--LFNMNAMSALYHIAQN--ESPALQS 236
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 98/201 (48%), Gaps = 26/201 (12%)
Query: 55 KLGEGGFGPVYKGVLKNGDEIAVKRL------SGRSGQGLRELKNKLRL--------LGC 100
K+G G FG V++ +G ++AVK L + R + LRE+ RL +G
Sbjct: 44 KIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGA 102
Query: 101 CIDKDEKILIYEYMPNKSLDFFL--------FDWVTRVRIIEGIAQGLLYLHQYSRVRII 152
++ EY+ SL L D R+ + +A+G+ YLH + I+
Sbjct: 103 VTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPP-IV 161
Query: 153 HRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIK 212
HRDLK N+L+DK K+ DFG++R+ L + GT +M+PE + K
Sbjct: 162 HRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXA--AGTPEWMAPEVLRDEPSNEK 219
Query: 213 SDVFSFGVLLLKIVSGKKTTG 233
SDV+SFGV+L ++ + ++ G
Sbjct: 220 SDVYSFGVILWELATLQQPWG 240
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 98/193 (50%), Gaps = 23/193 (11%)
Query: 54 NKLGEGGFGPVYKGVLKNGD-EIAVKRLSG---------RSGQGLRELK--NKLRLLGCC 101
+KLG G +G VY+GV K +AVK L + ++E+K N ++LLG C
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 78
Query: 102 IDKDEKILIYEYMPNKSLDFFL-------FDWVTRVRIIEGIAQGLLYLHQYSRVRIIHR 154
+ +I E+M +L +L + V + + I+ + YL + IHR
Sbjct: 79 TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL---EKKNFIHR 135
Query: 155 DLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKSD 214
DL N L+ ++ K++DFG++R+ G+ A+ G ++ +PE FSIKSD
Sbjct: 136 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSIKSD 194
Query: 215 VFSFGVLLLKIVS 227
V++FGVLL +I +
Sbjct: 195 VWAFGVLLWEIAT 207
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 98/193 (50%), Gaps = 23/193 (11%)
Query: 54 NKLGEGGFGPVYKGVLKNGD-EIAVKRLSG---------RSGQGLRELK--NKLRLLGCC 101
+KLG G +G VY+GV K +AVK L + ++E+K N ++LLG C
Sbjct: 23 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 82
Query: 102 IDKDEKILIYEYMPNKSLDFFL-------FDWVTRVRIIEGIAQGLLYLHQYSRVRIIHR 154
+ +I E+M +L +L + V + + I+ + YL + IHR
Sbjct: 83 TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL---EKKNFIHR 139
Query: 155 DLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKSD 214
DL N L+ ++ K++DFG++R+ G+ A+ G ++ +PE FSIKSD
Sbjct: 140 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSIKSD 198
Query: 215 VFSFGVLLLKIVS 227
V++FGVLL +I +
Sbjct: 199 VWAFGVLLWEIAT 211
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 98/193 (50%), Gaps = 23/193 (11%)
Query: 54 NKLGEGGFGPVYKGVLKNGD-EIAVKRLSG---------RSGQGLRELK--NKLRLLGCC 101
+KLG G +G VY+GV K +AVK L + ++E+K N ++LLG C
Sbjct: 32 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 91
Query: 102 IDKDEKILIYEYMPNKSLDFFL-------FDWVTRVRIIEGIAQGLLYLHQYSRVRIIHR 154
+ +I E+M +L +L + V + + I+ + YL + IHR
Sbjct: 92 TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL---EKKNFIHR 148
Query: 155 DLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKSD 214
DL N L+ ++ K++DFG++R+ G+ A+ G ++ +PE FSIKSD
Sbjct: 149 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSIKSD 207
Query: 215 VFSFGVLLLKIVS 227
V++FGVLL +I +
Sbjct: 208 VWAFGVLLWEIAT 220
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 96/194 (49%), Gaps = 25/194 (12%)
Query: 54 NKLGEGGFGPVYKGVLKNGD-EIAVKRLSG---------RSGQGLRELK--NKLRLLGCC 101
+KLG G +G VY+GV K +AVK L + ++E+K N ++LLG C
Sbjct: 17 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 76
Query: 102 IDKDEKILIYEYMPNKSLDFFLFDWVTRVRIIEGIAQGLLYL--------HQYSRVRIIH 153
+ +I E+M +L D++ E A LLY+ + IH
Sbjct: 77 TREPPFYIITEFMTYGNL----LDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH 132
Query: 154 RDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKS 213
RDL N L+ ++ K++DFG++R+ G+ A+ G ++ +PE FSIKS
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPI-KWTAPESLAYNKFSIKS 191
Query: 214 DVFSFGVLLLKIVS 227
DV++FGVLL +I +
Sbjct: 192 DVWAFGVLLWEIAT 205
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 96/194 (49%), Gaps = 25/194 (12%)
Query: 54 NKLGEGGFGPVYKGVLKNGD-EIAVKRLSG---------RSGQGLRELK--NKLRLLGCC 101
+KLG G +G VY+GV K +AVK L + ++E+K N ++LLG C
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 78
Query: 102 IDKDEKILIYEYMPNKSLDFFLFDWVTRVRIIEGIAQGLLYL--------HQYSRVRIIH 153
+ +I E+M +L D++ E A LLY+ + IH
Sbjct: 79 TREPPFYIITEFMTYGNL----LDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH 134
Query: 154 RDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKS 213
RDL N L+ ++ K++DFG++R+ G+ A+ G ++ +PE FSIKS
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSIKS 193
Query: 214 DVFSFGVLLLKIVS 227
DV++FGVLL +I +
Sbjct: 194 DVWAFGVLLWEIAT 207
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 98/194 (50%), Gaps = 21/194 (10%)
Query: 54 NKLGEGGFGPVYKGVLKNGDEIAVK--RLSGRSGQGL---RELKNKL------RLLGCCI 102
++G G FG V+ G N D++A+K R S + E+ KL +L G C+
Sbjct: 11 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 70
Query: 103 DKDEKILIYEYMPNKSLDFFL------FDWVTRVRIIEGIAQGLLYLHQYSRVRIIHRDL 156
++ L++E+M + L +L F T + + + +G+ YL + +IHRDL
Sbjct: 71 EQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDL 127
Query: 157 KVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVF 216
N L+ ++ K+SDFG+ R ++ ++TG ++ SPE +S KSDV+
Sbjct: 128 AARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV-KWASPEVFSFSRYSSKSDVW 186
Query: 217 SFGVLLLKIVSGKK 230
SFGVL+ ++ S K
Sbjct: 187 SFGVLMWEVFSEGK 200
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 98/193 (50%), Gaps = 23/193 (11%)
Query: 54 NKLGEGGFGPVYKGVLKNGD-EIAVKRLSG---------RSGQGLRELK--NKLRLLGCC 101
+KLG G +G VY+GV K +AVK L + ++E+K N ++LLG C
Sbjct: 24 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 83
Query: 102 IDKDEKILIYEYMPNKSLDFFL-------FDWVTRVRIIEGIAQGLLYLHQYSRVRIIHR 154
+ +I E+M +L +L + V + + I+ + YL + IHR
Sbjct: 84 TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL---EKKNFIHR 140
Query: 155 DLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKSD 214
DL N L+ ++ K++DFG++R+ G+ A+ G ++ +PE FSIKSD
Sbjct: 141 DLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPI-KWTAPESLAYNKFSIKSD 199
Query: 215 VFSFGVLLLKIVS 227
V++FGVLL +I +
Sbjct: 200 VWAFGVLLWEIAT 212
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 135/318 (42%), Gaps = 75/318 (23%)
Query: 38 FSFSSVSTATNKFS---DAN------KLGEGGFGPVYKGVLKNGDE----IAVKRL---- 80
F+F + A +F+ DA+ +G G FG V G LK + +A+K L
Sbjct: 10 FTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGY 69
Query: 81 ---------SGRSGQGLRELKNKLRLLGCCIDKDEKILIYEYMPNKSLDFFL------FD 125
S S G + N + L G ++I EYM N SLD FL F
Sbjct: 70 TDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFT 129
Query: 126 WVTRVRIIEGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNEL 185
+ V ++ GI G+ YL S V HRDL NIL++ ++ K+SDFG++R+ +
Sbjct: 130 VIQLVGMLRGIGSGMKYLSDMSAV---HRDLAARNILVNSNLVCKVSDFGMSRVLEDDPE 186
Query: 186 QANT---GRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVS-GKKTTGFYRTYSFT 241
A T G+I R+ +PE F+ SDV+S+G+++ +++S G++ ++ +
Sbjct: 187 AAYTTRGGKI--PIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP--YWDMSNQD 242
Query: 242 LLGYISENIYEFPSVDTHNVKTFGFLHLTIFKLFSISSVGLSNDIVCLCILRYVNIALLC 301
++ I E P +D C + + L C
Sbjct: 243 VIKAIEEGYRLPPPMD--------------------------------CPIALHQLMLDC 270
Query: 302 VQESADDRPTMNDVVSML 319
Q+ DRP +V+ML
Sbjct: 271 WQKERSDRPKFGQIVNML 288
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 96/194 (49%), Gaps = 25/194 (12%)
Query: 54 NKLGEGGFGPVYKGVLKNGD-EIAVKRLSG---------RSGQGLRELK--NKLRLLGCC 101
+KLG G +G VY+GV K +AVK L + ++E+K N ++LLG C
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 78
Query: 102 IDKDEKILIYEYMPNKSLDFFLFDWVTRVRIIEGIAQGLLYL--------HQYSRVRIIH 153
+ +I E+M +L D++ E A LLY+ + IH
Sbjct: 79 TREPPFYIIIEFMTYGNL----LDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH 134
Query: 154 RDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKS 213
RDL N L+ ++ K++DFG++R+ G+ A+ G ++ +PE FSIKS
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSIKS 193
Query: 214 DVFSFGVLLLKIVS 227
DV++FGVLL +I +
Sbjct: 194 DVWAFGVLLWEIAT 207
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 100/210 (47%), Gaps = 42/210 (20%)
Query: 56 LGEGGFGPVYKGVLKNGDEIAVKRLSGRSGQGLRELKNKLRL-------LGCCIDKDEKI 108
+G G +G VYKG L + +AVK S + Q KN R+ + I DE++
Sbjct: 21 IGRGRYGAVYKGSL-DERPVAVKVFSFANRQNFINEKNIYRVPLMEHDNIARFIVGDERV 79
Query: 109 ---------LIYEYMPNKSLDFFLF----DWVTRVRIIEGIAQGLLYLH------QYSRV 149
L+ EY PN SL +L DWV+ R+ + +GL YLH + +
Sbjct: 80 TADGRMEYLLVMEYYPNGSLXKYLSLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKP 139
Query: 150 RIIHRDLKVSNILLDKDMNPKISDFGIARICRGNEL----QANTGRI--VGTYRYMSPEY 203
I HRDL N+L+ D ISDFG++ GN L + + I VGT RYM+PE
Sbjct: 140 AISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPE- 198
Query: 204 AIQGIFSIKS--------DVFSFGVLLLKI 225
++G +++ D+++ G++ +I
Sbjct: 199 VLEGAVNLRDXESALKQVDMYALGLIYWEI 228
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 96/198 (48%), Gaps = 29/198 (14%)
Query: 56 LGEGGFGPVYKGVLKNGDE----IAVKRLSG-------------RSGQGLRELKNKLRLL 98
+G G FG V +G LK + +A+K L G S G E N +RL
Sbjct: 22 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 81
Query: 99 GCCIDKDEKILIYEYMPNKSLDFFL------FDWVTRVRIIEGIAQGLLYLHQYSRVRII 152
G + +++ E+M N +LD FL F + V ++ GIA G+ YL + S V
Sbjct: 82 GVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAEMSYV--- 138
Query: 153 HRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVG---TYRYMSPEYAIQGIF 209
HRDL NIL++ ++ K+SDFG++R N +G R+ +PE F
Sbjct: 139 HRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFRKF 198
Query: 210 SIKSDVFSFGVLLLKIVS 227
+ SD +S+G+++ +++S
Sbjct: 199 TSASDAWSYGIVMWEVMS 216
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 98/193 (50%), Gaps = 23/193 (11%)
Query: 54 NKLGEGGFGPVYKGVLKNGD-EIAVKRLSG---------RSGQGLRELK--NKLRLLGCC 101
+KLG G +G VY+GV K +AVK L + ++E+K N ++LLG C
Sbjct: 21 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 80
Query: 102 IDKDEKILIYEYMPNKSLDFFL-------FDWVTRVRIIEGIAQGLLYLHQYSRVRIIHR 154
+ +I E+M +L +L + V + + I+ + YL + IHR
Sbjct: 81 TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL---EKKNFIHR 137
Query: 155 DLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKSD 214
DL N L+ ++ K++DFG++R+ G+ A+ G ++ +PE FSIKSD
Sbjct: 138 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSIKSD 196
Query: 215 VFSFGVLLLKIVS 227
V++FGVLL +I +
Sbjct: 197 VWAFGVLLWEIAT 209
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 98/194 (50%), Gaps = 21/194 (10%)
Query: 54 NKLGEGGFGPVYKGVLKNGDEIAVK--RLSGRSGQGL---RELKNKL------RLLGCCI 102
++G G FG V+ G N D++A+K R S + E+ KL +L G C+
Sbjct: 13 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 72
Query: 103 DKDEKILIYEYMPNKSLDFFL------FDWVTRVRIIEGIAQGLLYLHQYSRVRIIHRDL 156
++ L++E+M + L +L F T + + + +G+ YL + +IHRDL
Sbjct: 73 EQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDL 129
Query: 157 KVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVF 216
N L+ ++ K+SDFG+ R ++ ++TG ++ SPE +S KSDV+
Sbjct: 130 AARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV-KWASPEVFSFSRYSSKSDVW 188
Query: 217 SFGVLLLKIVSGKK 230
SFGVL+ ++ S K
Sbjct: 189 SFGVLMWEVFSEGK 202
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 91/176 (51%), Gaps = 16/176 (9%)
Query: 63 PVYKGVLKNGDEIAVKR--LSGRSGQGLRELKNKLRLLGCCIDKDEKILIYEYMPNKSLD 120
PV LK G +R LS S G + N +RL G +++ EYM N SLD
Sbjct: 79 PVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLD 138
Query: 121 FFL------FDWVTRVRIIEGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDF 174
FL F + V ++ G+ G+ YL S + +HRDL N+L+D ++ K+SDF
Sbjct: 139 TFLRTHDGQFTIMQLVGMLRGVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDF 195
Query: 175 GIARICRGNELQANT---GRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVS 227
G++R+ + A T G+I R+ +PE FS SDV+SFGV++ ++++
Sbjct: 196 GLSRVLEDDPDAAXTTTGGKI--PIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 99/194 (51%), Gaps = 21/194 (10%)
Query: 54 NKLGEGGFGPVYKGVLKNGDEIAVKRLSGRS---------GQGLRELKNK--LRLLGCCI 102
++G G FG V+ G N D++A+K + S + + +L + ++L G C+
Sbjct: 33 QEIGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCL 92
Query: 103 DKDEKILIYEYMPNKSLDFFL------FDWVTRVRIIEGIAQGLLYLHQYSRVRIIHRDL 156
++ L++E+M + L +L F T + + + +G+ YL + +IHRDL
Sbjct: 93 EQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDL 149
Query: 157 KVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVF 216
N L+ ++ K+SDFG+ R ++ ++TG ++ SPE +S KSDV+
Sbjct: 150 AARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV-KWASPEVFSFSRYSSKSDVW 208
Query: 217 SFGVLLLKIVSGKK 230
SFGVL+ ++ S K
Sbjct: 209 SFGVLMWEVFSEGK 222
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 127/291 (43%), Gaps = 66/291 (22%)
Query: 56 LGEGGFGPVYKGVLK--NGDEIAV-------------KR--LSGRSGQGLRELKNKLRLL 98
+G G FG V G LK + EI+V +R L S G + N +RL
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 99 GCCIDKDEKILIYEYMPNKSLDFFL------FDWVTRVRIIEGIAQGLLYLHQYSRVRII 152
G +++ E M N SLD FL F + V ++ GIA G+ YL S + +
Sbjct: 113 GVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGAV 169
Query: 153 HRDLKVSNILLDKDMNPKISDFGIARICRGNELQANT---GRIVGTYRYMSPEYAIQGIF 209
HRDL NIL++ ++ K+SDFG++R+ + A T G+I R+ SPE F
Sbjct: 170 HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI--PIRWTSPEAIAYRKF 227
Query: 210 SIKSDVFSFGVLLLKIVS-GKKTTGFYRTYSFTLLGYISENIYEFPSVDTHNVKTFGFLH 268
+ SDV+S+G++L +++S G++ ++ + ++ + E P +D
Sbjct: 228 TSASDVWSYGIVLWEVMSYGERP--YWEMSNQDVIKAVDEGYRLPPPMD----------- 274
Query: 269 LTIFKLFSISSVGLSNDIVCLCILRYVNIALLCVQESADDRPTMNDVVSML 319
C + L C Q+ ++RP +VS+L
Sbjct: 275 ---------------------CPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 98/193 (50%), Gaps = 23/193 (11%)
Query: 54 NKLGEGGFGPVYKGVLKNGD-EIAVKRLSG---------RSGQGLRELK--NKLRLLGCC 101
+KLG G +G VY+GV K +AVK L + ++E+K N ++LLG C
Sbjct: 21 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 80
Query: 102 IDKDEKILIYEYMPNKSLDFFL-------FDWVTRVRIIEGIAQGLLYLHQYSRVRIIHR 154
+ +I E+M +L +L + V + + I+ + YL + IHR
Sbjct: 81 TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL---EKKNFIHR 137
Query: 155 DLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKSD 214
DL N L+ ++ K++DFG++R+ G+ A+ G ++ +PE FSIKSD
Sbjct: 138 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSIKSD 196
Query: 215 VFSFGVLLLKIVS 227
V++FGVLL +I +
Sbjct: 197 VWAFGVLLWEIAT 209
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 96/194 (49%), Gaps = 25/194 (12%)
Query: 54 NKLGEGGFGPVYKGVLKNGD-EIAVKRLSG---------RSGQGLRELK--NKLRLLGCC 101
+KLG G +G VY+GV K +AVK L + ++E+K N ++LLG C
Sbjct: 17 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 76
Query: 102 IDKDEKILIYEYMPNKSLDFFLFDWVTRVRIIEGIAQGLLYL--------HQYSRVRIIH 153
+ +I E+M +L D++ E A LLY+ + IH
Sbjct: 77 TREPPFYIIIEFMTYGNL----LDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH 132
Query: 154 RDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKS 213
RDL N L+ ++ K++DFG++R+ G+ A+ G ++ +PE FSIKS
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPI-KWTAPESLAYNKFSIKS 191
Query: 214 DVFSFGVLLLKIVS 227
DV++FGVLL +I +
Sbjct: 192 DVWAFGVLLWEIAT 205
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 98/193 (50%), Gaps = 23/193 (11%)
Query: 54 NKLGEGGFGPVYKGVLKNGD-EIAVKRLSG---------RSGQGLRELK--NKLRLLGCC 101
+KLG G +G VY+GV K +AVK L + ++E+K N ++LLG C
Sbjct: 20 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 79
Query: 102 IDKDEKILIYEYMPNKSLDFFL-------FDWVTRVRIIEGIAQGLLYLHQYSRVRIIHR 154
+ +I E+M +L +L + V + + I+ + YL + IHR
Sbjct: 80 TREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL---EKKNFIHR 136
Query: 155 DLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKSD 214
DL N L+ ++ K++DFG++R+ G+ A+ G ++ +PE FSIKSD
Sbjct: 137 DLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPI-KWTAPESLAYNKFSIKSD 195
Query: 215 VFSFGVLLLKIVS 227
V++FGVLL +I +
Sbjct: 196 VWAFGVLLWEIAT 208
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 98/193 (50%), Gaps = 23/193 (11%)
Query: 54 NKLGEGGFGPVYKGVLKNGD-EIAVKRLSG---------RSGQGLRELK--NKLRLLGCC 101
+KLG G +G VY+GV K +AVK L + ++E+K N ++LLG C
Sbjct: 24 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 83
Query: 102 IDKDEKILIYEYMPNKSLDFFL-------FDWVTRVRIIEGIAQGLLYLHQYSRVRIIHR 154
+ +I E+M +L +L + V + + I+ + YL + IHR
Sbjct: 84 TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL---EKKNFIHR 140
Query: 155 DLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKSD 214
DL N L+ ++ K++DFG++R+ G+ A+ G ++ +PE FSIKSD
Sbjct: 141 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSIKSD 199
Query: 215 VFSFGVLLLKIVS 227
V++FGVLL +I +
Sbjct: 200 VWAFGVLLWEIAT 212
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 99/201 (49%), Gaps = 26/201 (12%)
Query: 55 KLGEGGFGPVYKGVLKNGDEIAVKRL------SGRSGQGLRELKNKLRL--------LGC 100
K+G G FG V++ +G ++AVK L + R + LRE+ RL +G
Sbjct: 44 KIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGA 102
Query: 101 CIDKDEKILIYEYMPNKSLDFFL--------FDWVTRVRIIEGIAQGLLYLHQYSRVRII 152
++ EY+ SL L D R+ + +A+G+ YLH + I+
Sbjct: 103 VTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPP-IV 161
Query: 153 HRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIK 212
HR+LK N+L+DK K+ DFG++R+ L + + GT +M+PE + K
Sbjct: 162 HRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSA--AGTPEWMAPEVLRDEPSNEK 219
Query: 213 SDVFSFGVLLLKIVSGKKTTG 233
SDV+SFGV+L ++ + ++ G
Sbjct: 220 SDVYSFGVILWELATLQQPWG 240
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 96/194 (49%), Gaps = 25/194 (12%)
Query: 54 NKLGEGGFGPVYKGVLKNGD-EIAVKRLSG---------RSGQGLRELK--NKLRLLGCC 101
+KLG G +G VY+GV K +AVK L + ++E+K N ++LLG C
Sbjct: 24 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 83
Query: 102 IDKDEKILIYEYMPNKSLDFFLFDWVTRVRIIEGIAQGLLYL--------HQYSRVRIIH 153
+ +I E+M +L D++ E A LLY+ + IH
Sbjct: 84 TREPPFYIITEFMTYGNL----LDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH 139
Query: 154 RDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKS 213
RDL N L+ ++ K++DFG++R+ G+ A+ G ++ +PE FSIKS
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSIKS 198
Query: 214 DVFSFGVLLLKIVS 227
DV++FGVLL +I +
Sbjct: 199 DVWAFGVLLWEIAT 212
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 98/194 (50%), Gaps = 21/194 (10%)
Query: 54 NKLGEGGFGPVYKGVLKNGDEIAVK--RLSGRSGQGL---RELKNKL------RLLGCCI 102
++G G FG V+ G N D++A+K R S + E+ KL +L G C+
Sbjct: 16 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 75
Query: 103 DKDEKILIYEYMPNKSLDFFL------FDWVTRVRIIEGIAQGLLYLHQYSRVRIIHRDL 156
++ L++E+M + L +L F T + + + +G+ YL + +IHRDL
Sbjct: 76 EQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDL 132
Query: 157 KVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVF 216
N L+ ++ K+SDFG+ R ++ ++TG ++ SPE +S KSDV+
Sbjct: 133 AARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV-KWASPEVFSFSRYSSKSDVW 191
Query: 217 SFGVLLLKIVSGKK 230
SFGVL+ ++ S K
Sbjct: 192 SFGVLMWEVFSEGK 205
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 96/194 (49%), Gaps = 25/194 (12%)
Query: 54 NKLGEGGFGPVYKGVLKNGD-EIAVKRLSG---------RSGQGLRELK--NKLRLLGCC 101
+KLG G +G VY+GV K +AVK L + ++E+K N ++LLG C
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 78
Query: 102 IDKDEKILIYEYMPNKSLDFFLFDWVTRVRIIEGIAQGLLYL--------HQYSRVRIIH 153
+ +I E+M +L D++ E A LLY+ + IH
Sbjct: 79 TREPPFYIITEFMTYGNL----LDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH 134
Query: 154 RDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKS 213
RDL N L+ ++ K++DFG++R+ G+ A+ G ++ +PE FSIKS
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSIKS 193
Query: 214 DVFSFGVLLLKIVS 227
DV++FGVLL +I +
Sbjct: 194 DVWAFGVLLWEIAT 207
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 96/194 (49%), Gaps = 25/194 (12%)
Query: 54 NKLGEGGFGPVYKGVLKNGD-EIAVKRLSG---------RSGQGLRELK--NKLRLLGCC 101
+KLG G +G VY+GV K +AVK L + ++E+K N ++LLG C
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 78
Query: 102 IDKDEKILIYEYMPNKSLDFFLFDWVTRVRIIEGIAQGLLYL--------HQYSRVRIIH 153
+ +I E+M +L D++ E A LLY+ + IH
Sbjct: 79 TREPPFYIIIEFMTYGNL----LDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH 134
Query: 154 RDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKS 213
RDL N L+ ++ K++DFG++R+ G+ A+ G ++ +PE FSIKS
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSIKS 193
Query: 214 DVFSFGVLLLKIVS 227
DV++FGVLL +I +
Sbjct: 194 DVWAFGVLLWEIAT 207
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 99/198 (50%), Gaps = 31/198 (15%)
Query: 56 LGEGGFGPVYKGVLK--NGDEIAV-------------KR--LSGRSGQGLRELKNKLRLL 98
+G G FG V G LK + EI+V +R L S G + N +RL
Sbjct: 24 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 83
Query: 99 GCCIDKDEKILIYEYMPNKSLDFFL------FDWVTRVRIIEGIAQGLLYLHQYSRVRII 152
G +++ E M N SLD FL F + V ++ GIA G+ YL S + +
Sbjct: 84 GVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGYV 140
Query: 153 HRDLKVSNILLDKDMNPKISDFGIARICRGNELQANT---GRIVGTYRYMSPEYAIQGIF 209
HRDL NIL++ ++ K+SDFG++R+ + A T G+I R+ SPE F
Sbjct: 141 HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI--PIRWTSPEAIAYRKF 198
Query: 210 SIKSDVFSFGVLLLKIVS 227
+ SDV+S+G++L +++S
Sbjct: 199 TSASDVWSYGIVLWEVMS 216
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 91/176 (51%), Gaps = 16/176 (9%)
Query: 63 PVYKGVLKNGDEIAVKR--LSGRSGQGLRELKNKLRLLGCCIDKDEKILIYEYMPNKSLD 120
PV LK G +R LS S G + N +RL G +++ EYM N SLD
Sbjct: 79 PVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLD 138
Query: 121 FFL------FDWVTRVRIIEGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDF 174
FL F + V ++ G+ G+ YL S + +HRDL N+L+D ++ K+SDF
Sbjct: 139 TFLRTHDGQFTIMQLVGMLRGVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDF 195
Query: 175 GIARICRGNELQANT---GRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVS 227
G++R+ + A T G+I R+ +PE FS SDV+SFGV++ ++++
Sbjct: 196 GLSRVLEDDPDAAYTTTGGKI--PIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 106/217 (48%), Gaps = 32/217 (14%)
Query: 37 LFSFSSVSTATNKFSDANKLGEGGFGPVYKGVLK--NGDEIAV-------------KR-- 79
+ F+ ATN S +G G FG V G LK + EI+V +R
Sbjct: 35 VHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 80 LSGRSGQGLRELKNKLRLLGCCIDKDEKILIYEYMPNKSLDFFL------FDWVTRVRII 133
L S G + N +RL G +++ E M N SLD FL F + V ++
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGML 153
Query: 134 EGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANT---G 190
GIA G+ YL S + +HRDL NIL++ ++ K+SDFG++R+ + A T G
Sbjct: 154 RGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 210
Query: 191 RIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVS 227
+I R+ SPE F+ SDV+S+G++L +++S
Sbjct: 211 KI--PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 105/214 (49%), Gaps = 30/214 (14%)
Query: 37 LFSFSSVSTATNKFSDANKLGEGGFGPVYKGV-LKNGDEIAVKRLSGRSGQG-------- 87
L S SV K++ K+G+G G VY + + G E+A+++++ +
Sbjct: 9 LRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEI 68
Query: 88 --LRELKNK--LRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTRVRIIEG-IA----- 137
+RE KN + L + DE ++ EY+ SL D VT + EG IA
Sbjct: 69 LVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT----DVVTETCMDEGQIAAVCRE 124
Query: 138 --QGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGT 195
Q L +LH ++IHRD+K NILL D + K++DFG + Q+ +VGT
Sbjct: 125 CLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFC--AQITPEQSKRSEMVGT 179
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGK 229
+M+PE + + K D++S G++ ++++ G+
Sbjct: 180 PYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 105/214 (49%), Gaps = 30/214 (14%)
Query: 37 LFSFSSVSTATNKFSDANKLGEGGFGPVYKGV-LKNGDEIAVKRLSGRSGQG-------- 87
L S SV K++ K+G+G G VY + + G E+A+++++ +
Sbjct: 9 LRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEI 68
Query: 88 --LRELKNK--LRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTRVRIIEG-IA----- 137
+RE KN + L + DE ++ EY+ SL D VT + EG IA
Sbjct: 69 LVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT----DVVTETCMDEGQIAAVCRE 124
Query: 138 --QGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGT 195
Q L +LH ++IHRD+K NILL D + K++DFG + Q+ +VGT
Sbjct: 125 CLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFC--AQITPEQSKRSXMVGT 179
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGK 229
+M+PE + + K D++S G++ ++++ G+
Sbjct: 180 PYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 105/214 (49%), Gaps = 30/214 (14%)
Query: 37 LFSFSSVSTATNKFSDANKLGEGGFGPVYKGV-LKNGDEIAVKRLSGRSGQG-------- 87
L S SV K++ K+G+G G VY + + G E+A+++++ +
Sbjct: 10 LRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEI 69
Query: 88 --LRELKNK--LRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTRVRIIEG-IA----- 137
+RE KN + L + DE ++ EY+ SL D VT + EG IA
Sbjct: 70 LVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT----DVVTETCMDEGQIAAVCRE 125
Query: 138 --QGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGT 195
Q L +LH ++IHRD+K NILL D + K++DFG + Q+ +VGT
Sbjct: 126 CLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFC--AQITPEQSKRSXMVGT 180
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGK 229
+M+PE + + K D++S G++ ++++ G+
Sbjct: 181 PYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 214
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 105/214 (49%), Gaps = 30/214 (14%)
Query: 37 LFSFSSVSTATNKFSDANKLGEGGFGPVYKGV-LKNGDEIAVKRLSGRSGQG-------- 87
L S SV K++ K+G+G G VY + + G E+A+++++ +
Sbjct: 9 LRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEI 68
Query: 88 --LRELKNK--LRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTRVRIIEG-IA----- 137
+RE KN + L + DE ++ EY+ SL D VT + EG IA
Sbjct: 69 LVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT----DVVTETCMDEGQIAAVCRE 124
Query: 138 --QGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGT 195
Q L +LH ++IHRD+K NILL D + K++DFG + Q+ +VGT
Sbjct: 125 CLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFC--AQITPEQSKRSTMVGT 179
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGK 229
+M+PE + + K D++S G++ ++++ G+
Sbjct: 180 PYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 97/193 (50%), Gaps = 23/193 (11%)
Query: 54 NKLGEGGFGPVYKGVLKNGD-EIAVKRLSG---------RSGQGLRELK--NKLRLLGCC 101
+KLG G +G VY+GV K +AVK L + ++E+K N ++LLG C
Sbjct: 21 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 80
Query: 102 IDKDEKILIYEYMPNKSLDFFL-------FDWVTRVRIIEGIAQGLLYLHQYSRVRIIHR 154
+ +I E+M +L +L + V + + I+ + YL + IHR
Sbjct: 81 TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL---EKKNFIHR 137
Query: 155 DLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKSD 214
DL N L+ ++ K++DFG++R+ G+ A G ++ +PE FSIKSD
Sbjct: 138 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPI-KWTAPESLAYNKFSIKSD 196
Query: 215 VFSFGVLLLKIVS 227
V++FGVLL +I +
Sbjct: 197 VWAFGVLLWEIAT 209
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 97/193 (50%), Gaps = 23/193 (11%)
Query: 54 NKLGEGGFGPVYKGVLKNGD-EIAVKRLSG---------RSGQGLRELK--NKLRLLGCC 101
+KLG G +G VY+GV K +AVK L + ++E+K N ++LLG C
Sbjct: 20 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 79
Query: 102 IDKDEKILIYEYMPNKSLDFFL-------FDWVTRVRIIEGIAQGLLYLHQYSRVRIIHR 154
+ +I E+M +L +L + V + + I+ + YL + IHR
Sbjct: 80 TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHR 136
Query: 155 DLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKSD 214
DL N L+ ++ K++DFG++R+ G+ A G ++ +PE FSIKSD
Sbjct: 137 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPI-KWTAPESLAYNKFSIKSD 195
Query: 215 VFSFGVLLLKIVS 227
V++FGVLL +I +
Sbjct: 196 VWAFGVLLWEIAT 208
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 94/218 (43%), Gaps = 37/218 (16%)
Query: 44 STATNKFSDANKLGEGGFGPVY----KGVLKNGDEIAVKRLSGRSGQGLRE--------- 90
A K + + +LG+G FG VY KGV+K+ E V + +RE
Sbjct: 15 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 74
Query: 91 ------LKNKLRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTR--------------- 129
+ +RLLG ++I E M L +L
Sbjct: 75 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 134
Query: 130 VRIIEGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANT 189
+++ IA G+ YL+ + +HRDL N ++ +D KI DFG+ R +
Sbjct: 135 IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKG 191
Query: 190 GRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVS 227
G+ + R+MSPE G+F+ SDV+SFGV+L +I +
Sbjct: 192 GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 94/218 (43%), Gaps = 37/218 (16%)
Query: 44 STATNKFSDANKLGEGGFGPVY----KGVLKNGDEIAVKRLSGRSGQGLRE--------- 90
A K + + +LG+G FG VY KGV+K+ E V + +RE
Sbjct: 6 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 65
Query: 91 ------LKNKLRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTR--------------- 129
+ +RLLG ++I E M L +L
Sbjct: 66 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 125
Query: 130 VRIIEGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANT 189
+++ IA G+ YL+ + +HRDL N ++ +D KI DFG+ R +
Sbjct: 126 IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKG 182
Query: 190 GRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVS 227
G+ + R+MSPE G+F+ SDV+SFGV+L +I +
Sbjct: 183 GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 220
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 124/291 (42%), Gaps = 66/291 (22%)
Query: 56 LGEGGFGPVYKGVLKNGDE----IAVKRL-------------SGRSGQGLRELKNKLRLL 98
+G G FG V G LK + +A+K L S S G + N + L
Sbjct: 22 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 81
Query: 99 GCCIDKDEKILIYEYMPNKSLDFFL------FDWVTRVRIIEGIAQGLLYLHQYSRVRII 152
G ++I EYM N SLD FL F + V ++ GI G+ YL S V
Sbjct: 82 GVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSYV--- 138
Query: 153 HRDLKVSNILLDKDMNPKISDFGIARICRGNELQANT---GRIVGTYRYMSPEYAIQGIF 209
HRDL NIL++ ++ K+SDFG++R+ + A T G+I R+ +PE F
Sbjct: 139 HRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKI--PIRWTAPEAIAYRKF 196
Query: 210 SIKSDVFSFGVLLLKIVS-GKKTTGFYRTYSFTLLGYISENIYEFPSVDTHNVKTFGFLH 268
+ SDV+S+G+++ +++S G++ ++ + ++ I E P +D
Sbjct: 197 TSASDVWSYGIVMWEVMSYGERP--YWDMSNQDVIKAIEEGYRLPPPMD----------- 243
Query: 269 LTIFKLFSISSVGLSNDIVCLCILRYVNIALLCVQESADDRPTMNDVVSML 319
C + + L C Q+ DRP +V+ML
Sbjct: 244 ---------------------CPIALHQLMLDCWQKERSDRPKFGQIVNML 273
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 124/291 (42%), Gaps = 66/291 (22%)
Query: 56 LGEGGFGPVYKGVLKNGDE----IAVKRL-------------SGRSGQGLRELKNKLRLL 98
+G G FG V G LK + +A+K L S S G + N + L
Sbjct: 16 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 75
Query: 99 GCCIDKDEKILIYEYMPNKSLDFFL------FDWVTRVRIIEGIAQGLLYLHQYSRVRII 152
G ++I EYM N SLD FL F + V ++ GI G+ YL S V
Sbjct: 76 GVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSYV--- 132
Query: 153 HRDLKVSNILLDKDMNPKISDFGIARICRGNELQANT---GRIVGTYRYMSPEYAIQGIF 209
HRDL NIL++ ++ K+SDFG++R+ + A T G+I R+ +PE F
Sbjct: 133 HRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKI--PIRWTAPEAIAYRKF 190
Query: 210 SIKSDVFSFGVLLLKIVS-GKKTTGFYRTYSFTLLGYISENIYEFPSVDTHNVKTFGFLH 268
+ SDV+S+G+++ +++S G++ ++ + ++ I E P +D
Sbjct: 191 TSASDVWSYGIVMWEVMSYGERP--YWDMSNQDVIKAIEEGYRLPPPMD----------- 237
Query: 269 LTIFKLFSISSVGLSNDIVCLCILRYVNIALLCVQESADDRPTMNDVVSML 319
C + + L C Q+ DRP +V+ML
Sbjct: 238 ---------------------CPIALHQLMLDCWQKERSDRPKFGQIVNML 267
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 121/257 (47%), Gaps = 65/257 (25%)
Query: 15 IELPVNSNLTKRSKKKEVDQLPLFSFSSVSTATNKFSDANKLGEGGFGPVYKGVL----- 69
+E+P+ N K++K KE+ S S+V +F + +LGE FG VYKG L
Sbjct: 7 MEMPL-INQHKQAKLKEI------SLSAV-----RFME--ELGEDRFGKVYKGHLFGPAP 52
Query: 70 -KNGDEIAVKRLSGRSGQGLRE-------LKNKLR------LLGCCIDKDEKI-LIYEYM 114
+ +A+K L ++ LRE L+ +L+ LLG + KD+ + +I+ Y
Sbjct: 53 GEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLG-VVTKDQPLSMIFSYC 111
Query: 115 PNKSLDFFLFDWVTR------------------------VRIIEGIAQGLLYLHQYSRVR 150
+ L FL V R V ++ IA G+ YL S
Sbjct: 112 SHGDLHEFL---VMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYL---SSHH 165
Query: 151 IIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFS 210
++H+DL N+L+ +N KISD G+ R + G + R+M+PE + G FS
Sbjct: 166 VVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFS 225
Query: 211 IKSDVFSFGVLLLKIVS 227
I SD++S+GV+L ++ S
Sbjct: 226 IDSDIWSYGVVLWEVFS 242
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 96/216 (44%), Gaps = 39/216 (18%)
Query: 55 KLGEGGFGPVYKGVLKN----GDEI--AVKRLSGRSGQGLRELKNKLRLL---------- 98
+LGEG FG V+ N D+I AVK L S ++ + LL
Sbjct: 20 ELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVK 79
Query: 99 --GCCIDKDEKILIYEYMPNKSLDFFL------------------FDWVTRVRIIEGIAQ 138
G C++ D I+++EYM + L+ FL + I + IA
Sbjct: 80 FYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAA 139
Query: 139 GLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRY 198
G++YL + +HRDL N L+ +++ KI DFG++R + G + R+
Sbjct: 140 GMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRW 196
Query: 199 MSPEYAIQGIFSIKSDVFSFGVLLLKIVSGKKTTGF 234
M PE + F+ +SDV+S GV+L +I + K +
Sbjct: 197 MPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWY 232
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 96/225 (42%), Gaps = 37/225 (16%)
Query: 37 LFSFSSVSTATNKFSDANKLGEGGFGPVY----KGVLKNGDEIAVKRLSGRSGQGLRE-- 90
+F A K + + +LG+G FG VY KGV+K+ E V + +RE
Sbjct: 5 VFVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 64
Query: 91 -------------LKNKLRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTR-------- 129
+ +RLLG ++I E M L +L
Sbjct: 65 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 124
Query: 130 -------VRIIEGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRG 182
+++ IA G+ YL+ + +HRDL N ++ +D KI DFG+ R
Sbjct: 125 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 181
Query: 183 NELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVS 227
+ G+ + R+MSPE G+F+ SDV+SFGV+L +I +
Sbjct: 182 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 226
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 97/194 (50%), Gaps = 21/194 (10%)
Query: 54 NKLGEGGFGPVYKGVLKNGDEIAVK--RLSGRSGQGL---RELKNKL------RLLGCCI 102
++G G FG V+ G N D++A+K R S + E+ KL +L G C+
Sbjct: 14 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 73
Query: 103 DKDEKILIYEYMPNKSLDFFL------FDWVTRVRIIEGIAQGLLYLHQYSRVRIIHRDL 156
++ L+ E+M + L +L F T + + + +G+ YL + +IHRDL
Sbjct: 74 EQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDL 130
Query: 157 KVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVF 216
N L+ ++ K+SDFG+ R ++ ++TG ++ SPE +S KSDV+
Sbjct: 131 AARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV-KWASPEVFSFSRYSSKSDVW 189
Query: 217 SFGVLLLKIVSGKK 230
SFGVL+ ++ S K
Sbjct: 190 SFGVLMWEVFSEGK 203
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 94/218 (43%), Gaps = 37/218 (16%)
Query: 44 STATNKFSDANKLGEGGFGPVY----KGVLKNGDEIAVKRLSGRSGQGLRE--------- 90
A K + + +LG+G FG VY KGV+K+ E V + +RE
Sbjct: 43 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 102
Query: 91 ------LKNKLRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTR--------------- 129
+ +RLLG ++I E M L +L
Sbjct: 103 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 162
Query: 130 VRIIEGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANT 189
+++ IA G+ YL+ + +HRDL N ++ +D KI DFG+ R +
Sbjct: 163 IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKG 219
Query: 190 GRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVS 227
G+ + R+MSPE G+F+ SDV+SFGV+L +I +
Sbjct: 220 GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 257
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 94/218 (43%), Gaps = 37/218 (16%)
Query: 44 STATNKFSDANKLGEGGFGPVY----KGVLKNGDEIAVKRLSGRSGQGLRE--------- 90
A K + + +LG+G FG VY KGV+K+ E V + +RE
Sbjct: 14 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 73
Query: 91 ------LKNKLRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTR--------------- 129
+ +RLLG ++I E M L +L
Sbjct: 74 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 133
Query: 130 VRIIEGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANT 189
+++ IA G+ YL+ + +HRDL N ++ +D KI DFG+ R +
Sbjct: 134 IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKG 190
Query: 190 GRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVS 227
G+ + R+MSPE G+F+ SDV+SFGV+L +I +
Sbjct: 191 GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 94/218 (43%), Gaps = 37/218 (16%)
Query: 44 STATNKFSDANKLGEGGFGPVY----KGVLKNGDEIAVKRLSGRSGQGLRE--------- 90
A K + + +LG+G FG VY KGV+K+ E V + +RE
Sbjct: 21 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 80
Query: 91 ------LKNKLRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTR--------------- 129
+ +RLLG ++I E M L +L
Sbjct: 81 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 140
Query: 130 VRIIEGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANT 189
+++ IA G+ YL+ + +HRDL N ++ +D KI DFG+ R +
Sbjct: 141 IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKG 197
Query: 190 GRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVS 227
G+ + R+MSPE G+F+ SDV+SFGV+L +I +
Sbjct: 198 GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 98/193 (50%), Gaps = 23/193 (11%)
Query: 54 NKLGEGGFGPVYKGVLKNGD-EIAVKRLSG---------RSGQGLRELK--NKLRLLGCC 101
+KLG G +G VY+GV K +AVK L + ++E+K N ++LLG C
Sbjct: 223 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 282
Query: 102 IDKDEKILIYEYMPNKSLDFFL-------FDWVTRVRIIEGIAQGLLYLHQYSRVRIIHR 154
+ +I E+M +L +L + V + + I+ + YL + IHR
Sbjct: 283 TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL---EKKNFIHR 339
Query: 155 DLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKSD 214
+L N L+ ++ K++DFG++R+ G+ A+ G ++ +PE FSIKSD
Sbjct: 340 NLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAYNKFSIKSD 398
Query: 215 VFSFGVLLLKIVS 227
V++FGVLL +I +
Sbjct: 399 VWAFGVLLWEIAT 411
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 94/218 (43%), Gaps = 37/218 (16%)
Query: 44 STATNKFSDANKLGEGGFGPVY----KGVLKNGDEIAVKRLSGRSGQGLRE--------- 90
A K + + +LG+G FG VY KGV+K+ E V + +RE
Sbjct: 15 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 74
Query: 91 ------LKNKLRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTR--------------- 129
+ +RLLG ++I E M L +L
Sbjct: 75 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 134
Query: 130 VRIIEGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANT 189
+++ IA G+ YL+ + +HRDL N ++ +D KI DFG+ R +
Sbjct: 135 IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKG 191
Query: 190 GRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVS 227
G+ + R+MSPE G+F+ SDV+SFGV+L +I +
Sbjct: 192 GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 94/218 (43%), Gaps = 37/218 (16%)
Query: 44 STATNKFSDANKLGEGGFGPVY----KGVLKNGDEIAVKRLSGRSGQGLRE--------- 90
A K + + +LG+G FG VY KGV+K+ E V + +RE
Sbjct: 14 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 73
Query: 91 ------LKNKLRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTR--------------- 129
+ +RLLG ++I E M L +L
Sbjct: 74 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 133
Query: 130 VRIIEGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANT 189
+++ IA G+ YL+ + +HRDL N ++ +D KI DFG+ R +
Sbjct: 134 IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKG 190
Query: 190 GRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVS 227
G+ + R+MSPE G+F+ SDV+SFGV+L +I +
Sbjct: 191 GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 98/194 (50%), Gaps = 25/194 (12%)
Query: 54 NKLGEGGFGPVYKGVLKNGD-EIAVKRLSG---------RSGQGLRELK--NKLRLLGCC 101
+KLG G +G VY+GV K +AVK L + ++E+K N ++LLG C
Sbjct: 226 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 285
Query: 102 IDKDEKILIYEYMPNKSLDFFLFDWVTRVRIIEGIAQGLLYLH-------QY-SRVRIIH 153
+ +I E+M +L D++ E A LLY+ +Y + IH
Sbjct: 286 TREPPFYIITEFMTYGNL----LDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH 341
Query: 154 RDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKS 213
R+L N L+ ++ K++DFG++R+ G+ A+ G ++ +PE FSIKS
Sbjct: 342 RNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSIKS 400
Query: 214 DVFSFGVLLLKIVS 227
DV++FGVLL +I +
Sbjct: 401 DVWAFGVLLWEIAT 414
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 97/191 (50%), Gaps = 31/191 (16%)
Query: 54 NKLGEGGFGPVYKGVLKNGDEIAVKRLSGRS---------GQGLRELK-NKLRLLGCCID 103
KLG G FG V+ ++AVK + S ++ L+ +KL L +
Sbjct: 188 KKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT 247
Query: 104 KDEKILIYEYMPNKSL-DFFLFDWVTR------VRIIEGIAQGLLYLHQYSRVRIIHRDL 156
K+ +I E+M SL DF D ++ + IA+G+ ++ Q + IHRDL
Sbjct: 248 KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN---YIHRDL 304
Query: 157 KVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVF 216
+ +NIL+ + KI+DFG+AR+ G + ++ +PE G F+IKSDV+
Sbjct: 305 RAANILVSASLVCKIADFGLARV--GAKF---------PIKWTAPEAINFGSFTIKSDVW 353
Query: 217 SFGVLLLKIVS 227
SFG+LL++IV+
Sbjct: 354 SFGILLMEIVT 364
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 98/193 (50%), Gaps = 23/193 (11%)
Query: 54 NKLGEGGFGPVYKGVLKNGD-EIAVKRLSG---------RSGQGLRELK--NKLRLLGCC 101
+KLG G +G VY+GV K +AVK L + ++E+K N ++LLG C
Sbjct: 265 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 324
Query: 102 IDKDEKILIYEYMPNKSLDFFL-------FDWVTRVRIIEGIAQGLLYLHQYSRVRIIHR 154
+ +I E+M +L +L + V + + I+ + YL + IHR
Sbjct: 325 TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL---EKKNFIHR 381
Query: 155 DLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKSD 214
+L N L+ ++ K++DFG++R+ G+ A+ G ++ +PE FSIKSD
Sbjct: 382 NLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAYNKFSIKSD 440
Query: 215 VFSFGVLLLKIVS 227
V++FGVLL +I +
Sbjct: 441 VWAFGVLLWEIAT 453
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 94/218 (43%), Gaps = 37/218 (16%)
Query: 44 STATNKFSDANKLGEGGFGPVY----KGVLKNGDEIAVKRLSGRSGQGLRE--------- 90
A K + + +LG+G FG VY KGV+K+ E V + +RE
Sbjct: 8 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 67
Query: 91 ------LKNKLRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTR--------------- 129
+ +RLLG ++I E M L +L
Sbjct: 68 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 127
Query: 130 VRIIEGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANT 189
+++ IA G+ YL+ + +HRDL N ++ +D KI DFG+ R +
Sbjct: 128 IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKG 184
Query: 190 GRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVS 227
G+ + R+MSPE G+F+ SDV+SFGV+L +I +
Sbjct: 185 GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 126/290 (43%), Gaps = 64/290 (22%)
Query: 56 LGEGGFGPVYKGVLKNGDE----IAVKRLS-GRSGQGLREL------------KNKLRLL 98
+G G FG V G LK + +A+K L G + + R+ N + L
Sbjct: 30 IGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLE 89
Query: 99 GCCIDKDEKILIYEYMPNKSLDFFL------FDWVTRVRIIEGIAQGLLYLHQYSRVRII 152
G +++ EYM N SLD FL F + V ++ GI+ G+ YL S + +
Sbjct: 90 GVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYL---SDMGYV 146
Query: 153 HRDLKVSNILLDKDMNPKISDFGIARICRGNELQANT---GRIVGTYRYMSPEYAIQGIF 209
HRDL NIL++ ++ K+SDFG++R+ + A T G+I R+ +PE F
Sbjct: 147 HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI--PIRWTAPEAIAFRKF 204
Query: 210 SIKSDVFSFGVLLLKIVSGKKTTGFYRTYSFTLLGYISENIYEFPSVDTHNVKTFGFLHL 269
+ SDV+S+G+++ ++VS Y +E + D G+
Sbjct: 205 TSASDVWSYGIVMWEVVS-----------------YGERPYWEMTNQDVIKAVEEGYR-- 245
Query: 270 TIFKLFSISSVGLSNDIVCLCILRYVNIALLCVQESADDRPTMNDVVSML 319
L + + C L + L C Q+ + RP +++V+ML
Sbjct: 246 ------------LPSPMDCPAAL--YQLMLDCWQKERNSRPKFDEIVNML 281
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 94/218 (43%), Gaps = 37/218 (16%)
Query: 44 STATNKFSDANKLGEGGFGPVY----KGVLKNGDEIAVKRLSGRSGQGLRE--------- 90
A K + + +LG+G FG VY KGV+K+ E V + +RE
Sbjct: 21 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 80
Query: 91 ------LKNKLRLLGCCIDKDEKILIYEYMPNKSLDFFLFDW---------------VTR 129
+ +RLLG ++I E M L +L
Sbjct: 81 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKM 140
Query: 130 VRIIEGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANT 189
+++ IA G+ YL+ + +HRDL N ++ +D KI DFG+ R +
Sbjct: 141 IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKG 197
Query: 190 GRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVS 227
G+ + R+MSPE G+F+ SDV+SFGV+L +I +
Sbjct: 198 GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 94/218 (43%), Gaps = 37/218 (16%)
Query: 44 STATNKFSDANKLGEGGFGPVY----KGVLKNGDEIAVKRLSGRSGQGLRE--------- 90
A K + + +LG+G FG VY KGV+K+ E V + +RE
Sbjct: 11 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 70
Query: 91 ------LKNKLRLLGCCIDKDEKILIYEYMPNKSLDFFLFDW---------------VTR 129
+ +RLLG ++I E M L +L
Sbjct: 71 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKM 130
Query: 130 VRIIEGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANT 189
+++ IA G+ YL+ + +HRDL N ++ +D KI DFG+ R +
Sbjct: 131 IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKG 187
Query: 190 GRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVS 227
G+ + R+MSPE G+F+ SDV+SFGV+L +I +
Sbjct: 188 GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 225
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 103/201 (51%), Gaps = 30/201 (14%)
Query: 50 FSDANKLGEGGFGPVYKGVLKN-GDEIAVKRLSGRSGQGLRELKNKLRLLGCCIDKDEKI 108
F KLGEG +G VYK + K G +A+K++ S L+E+ ++ ++ C D +
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESD--LQEIIKEISIMQQC-DSPHVV 87
Query: 109 LIY-EYMPNKSLDFFLFDW--------VTRVR-----------IIEGIAQGLLYLHQYSR 148
Y Y N L + + ++ + R+R I++ +GL YLH
Sbjct: 88 KYYGSYFKNTDL-WIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLH---F 143
Query: 149 VRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGI 208
+R IHRD+K NILL+ + + K++DFG+A + + A ++GT +M+PE +
Sbjct: 144 MRKIHRDIKAGNILLNTEGHAKLADFGVA--GQLTDXMAKRNXVIGTPFWMAPEVIQEIG 201
Query: 209 FSIKSDVFSFGVLLLKIVSGK 229
++ +D++S G+ +++ GK
Sbjct: 202 YNCVADIWSLGITAIEMAEGK 222
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 93/218 (42%), Gaps = 37/218 (16%)
Query: 44 STATNKFSDANKLGEGGFGPVY----KGVLKNGDEIAVKRLSGRSGQGLRE--------- 90
A K + + +LG+G FG VY KGV+K+ E V + +RE
Sbjct: 8 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 67
Query: 91 ------LKNKLRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTR--------------- 129
+ +RLLG ++I E M L +L
Sbjct: 68 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 127
Query: 130 VRIIEGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANT 189
+++ IA G+ YL+ + +HRDL N + +D KI DFG+ R +
Sbjct: 128 IQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKG 184
Query: 190 GRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVS 227
G+ + R+MSPE G+F+ SDV+SFGV+L +I +
Sbjct: 185 GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 42/211 (19%)
Query: 56 LGEGGFGPVYKGVLKNGDE-----IAVKRLSGRSG-------------QGLRELKNKLRL 97
LG G FG VYKG+ E +A+K L+ +G + + +RL
Sbjct: 23 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 82
Query: 98 LGCCIDKDEKILIYEYMPNKSL------------DFFLFDWVTRVRIIEGIAQGLLYLHQ 145
LG C+ + L+ + MP+ L L +W + IA+G++YL +
Sbjct: 83 LGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQ------IAKGMMYLEE 135
Query: 146 YSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAI 205
R++HRDL N+L+ + KI+DFG+AR+ G+E + N ++M+ E
Sbjct: 136 R---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIH 192
Query: 206 QGIFSIKSDVFSFGVLLLKIVS--GKKTTGF 234
F+ +SDV+S+GV + ++++ GK G
Sbjct: 193 YRKFTHQSDVWSYGVTIWELMTFGGKPYDGI 223
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 128/316 (40%), Gaps = 74/316 (23%)
Query: 55 KLGEGGFGPVYKG----VLKNGDEIAVKRLSGRSGQGLRE---------------LKNKL 95
+LG+G FG VY+G ++K E V + LRE + +
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 96 RLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTR---------------VRIIEGIAQGL 140
RLLG +++ E M + L +L +++ IA G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 141 LYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMS 200
YL+ + +HRDL N ++ D KI DFG+ R + G+ + R+M+
Sbjct: 144 AYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMA 200
Query: 201 PEYAIQGIFSIKSDVFSFGVLLLKIVSGKKTTGFYRTYSFTLLGYISENIYEFPSVDTHN 260
PE G+F+ SD++SFGV+L +I S + + Y G +E + +F
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEITSLAE-----QPYQ----GLSNEQVLKF------- 244
Query: 261 VKTFGFLHLTIFKLFSISSVGLSNDIVCLCILRYVNIALLCVQESADDRPTMNDVVSMLT 320
V G+L D C R ++ +C Q + + RPT ++V++L
Sbjct: 245 VMDGGYL-----------------DQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLK 287
Query: 321 NEAAALLPPKQPAFSY 336
++ L P P S+
Sbjct: 288 DD----LHPSFPEVSF 299
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 101/218 (46%), Gaps = 51/218 (23%)
Query: 54 NKLGEGGFGPVYKGVL------KNGDEIAVKRLSGRSGQGLRE-------LKNKLR---- 96
+LGE FG VYKG L + +A+K L ++ LRE L+ +L+
Sbjct: 15 EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNV 74
Query: 97 --LLGCCIDKDEKI-LIYEYMPNKSLDFFLFDWVTR------------------------ 129
LLG + KD+ + +I+ Y + L FL V R
Sbjct: 75 VCLLG-VVTKDQPLSMIFSYCSHGDLHEFL---VMRSPHSDVGSTDDDRTVKSALEPPDF 130
Query: 130 VRIIEGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANT 189
V ++ IA G+ YL S ++H+DL N+L+ +N KISD G+ R +
Sbjct: 131 VHLVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLL 187
Query: 190 GRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVS 227
G + R+M+PE + G FSI SD++S+GV+L ++ S
Sbjct: 188 GNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 42/211 (19%)
Query: 56 LGEGGFGPVYKGVLKNGDE-----IAVKRLSGRSG-------------QGLRELKNKLRL 97
LG G FG VYKG+ E +A+K L+ +G + + +RL
Sbjct: 46 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 105
Query: 98 LGCCIDKDEKILIYEYMPNKSL------------DFFLFDWVTRVRIIEGIAQGLLYLHQ 145
LG C+ + L+ + MP+ L L +W + IA+G++YL +
Sbjct: 106 LGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQ------IAKGMMYLEE 158
Query: 146 YSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAI 205
R++HRDL N+L+ + KI+DFG+AR+ G+E + N ++M+ E
Sbjct: 159 R---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIH 215
Query: 206 QGIFSIKSDVFSFGVLLLKIVS--GKKTTGF 234
F+ +SDV+S+GV + ++++ GK G
Sbjct: 216 YRKFTHQSDVWSYGVTIWELMTFGGKPYDGI 246
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 99/218 (45%), Gaps = 41/218 (18%)
Query: 55 KLGEGGFGPVY----KGVLKNGDE--IAVKRLSGRSGQGLRELKNK------------LR 96
+LGEG FG V+ +L D+ +AVK L S ++ + + +R
Sbjct: 25 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 84
Query: 97 LLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTRVRIIEG--------------------I 136
G C + ++++EYM + L+ FL +++ G +
Sbjct: 85 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 144
Query: 137 AQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTY 196
A G++YL + + +HRDL N L+ + + KI DFG++R + GR +
Sbjct: 145 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 201
Query: 197 RYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGKKTTGF 234
R+M PE + F+ +SDV+SFGV+L +I + K +
Sbjct: 202 RWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWY 239
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 99/218 (45%), Gaps = 41/218 (18%)
Query: 55 KLGEGGFGPVY----KGVLKNGDE--IAVKRLSGRSGQGLRELKNK------------LR 96
+LGEG FG V+ +L D+ +AVK L S ++ + + +R
Sbjct: 19 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 78
Query: 97 LLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTRVRIIEG--------------------I 136
G C + ++++EYM + L+ FL +++ G +
Sbjct: 79 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 138
Query: 137 AQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTY 196
A G++YL + + +HRDL N L+ + + KI DFG++R + GR +
Sbjct: 139 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 195
Query: 197 RYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGKKTTGF 234
R+M PE + F+ +SDV+SFGV+L +I + K +
Sbjct: 196 RWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWY 233
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 99/218 (45%), Gaps = 41/218 (18%)
Query: 55 KLGEGGFGPVY----KGVLKNGDE--IAVKRLSGRSGQGLRELKNK------------LR 96
+LGEG FG V+ +L D+ +AVK L S ++ + + +R
Sbjct: 48 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 107
Query: 97 LLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTRVRIIEG--------------------I 136
G C + ++++EYM + L+ FL +++ G +
Sbjct: 108 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 167
Query: 137 AQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTY 196
A G++YL + + +HRDL N L+ + + KI DFG++R + GR +
Sbjct: 168 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 224
Query: 197 RYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGKKTTGF 234
R+M PE + F+ +SDV+SFGV+L +I + K +
Sbjct: 225 RWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWY 262
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 99/199 (49%), Gaps = 27/199 (13%)
Query: 53 ANKLGEGGFGPVYKGVLKNGDEIAVKRL--SGRSGQGLRELKNKLRLLGCCID------- 103
++G G FG VYKG +GD +AVK L + + Q L+ KN++ +L
Sbjct: 17 GQRIGSGSFGTVYKGKW-HGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 74
Query: 104 ----KDEKILIYEYMPNKSLDFFL------FDWVTRVRIIEGIAQGLLYLHQYSRVRIIH 153
K + ++ ++ SL L F+ + I A+G+ YLH S IIH
Sbjct: 75 GYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS---IIH 131
Query: 154 RDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPE---YAIQGIFS 210
RDLK +NI L +D KI DFG+A + ++ G+ +M+PE +S
Sbjct: 132 RDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYS 191
Query: 211 IKSDVFSFGVLLLKIVSGK 229
+SDV++FG++L ++++G+
Sbjct: 192 FQSDVYAFGIVLYELMTGQ 210
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 127/316 (40%), Gaps = 74/316 (23%)
Query: 55 KLGEGGFGPVYKG----VLKNGDEIAVKRLSGRSGQGLRE---------------LKNKL 95
+LG+G FG VY+G ++K E V + LRE + +
Sbjct: 21 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 80
Query: 96 RLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTR---------------VRIIEGIAQGL 140
RLLG +++ E M + L +L +++ IA G+
Sbjct: 81 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 140
Query: 141 LYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMS 200
YL+ + +HRDL N ++ D KI DFG+ R + G+ + R+M+
Sbjct: 141 AYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMA 197
Query: 201 PEYAIQGIFSIKSDVFSFGVLLLKIVSGKKTTGFYRTYSFTLLGYISENIYEFPSVDTHN 260
PE G+F+ SD++SFGV+L +I S + + Y G +E + +F
Sbjct: 198 PESLKDGVFTTSSDMWSFGVVLWEITSLAE-----QPYQ----GLSNEQVLKF------- 241
Query: 261 VKTFGFLHLTIFKLFSISSVGLSNDIVCLCILRYVNIALLCVQESADDRPTMNDVVSMLT 320
V G+L D C R ++ +C Q + RPT ++V++L
Sbjct: 242 VMDGGYL-----------------DQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 284
Query: 321 NEAAALLPPKQPAFSY 336
++ L P P S+
Sbjct: 285 DD----LHPSFPEVSF 296
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 95/219 (43%), Gaps = 42/219 (19%)
Query: 55 KLGEGGFGPVYKGVLKNGDE------IAVKRLSGRSGQGLRELKNKLRLL---------- 98
+LGEG FG V+ N +AVK L + ++ + + LL
Sbjct: 22 ELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVK 81
Query: 99 --GCCIDKDEKILIYEYMPNKSLDFFL----------FDWVTR-----------VRIIEG 135
G C D D I+++EYM + L+ FL D R + I
Sbjct: 82 FYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQ 141
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGT 195
IA G++YL + +HRDL N L+ ++ KI DFG++R + G +
Sbjct: 142 IASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLP 198
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGKKTTGF 234
R+M PE + F+ +SDV+SFGV+L +I + K F
Sbjct: 199 IRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWF 237
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 127/316 (40%), Gaps = 74/316 (23%)
Query: 55 KLGEGGFGPVYKG----VLKNGDEIAVKRLSGRSGQGLRE---------------LKNKL 95
+LG+G FG VY+G ++K E V + LRE + +
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 96 RLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTR---------------VRIIEGIAQGL 140
RLLG +++ E M + L +L +++ IA G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 141 LYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMS 200
YL+ + +HRDL N ++ D KI DFG+ R + G+ + R+M+
Sbjct: 144 AYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMA 200
Query: 201 PEYAIQGIFSIKSDVFSFGVLLLKIVSGKKTTGFYRTYSFTLLGYISENIYEFPSVDTHN 260
PE G+F+ SD++SFGV+L +I S + + Y G +E + +F
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEITSLAE-----QPYQ----GLSNEQVLKF------- 244
Query: 261 VKTFGFLHLTIFKLFSISSVGLSNDIVCLCILRYVNIALLCVQESADDRPTMNDVVSMLT 320
V G+L D C R ++ +C Q + RPT ++V++L
Sbjct: 245 VMDGGYL-----------------DQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 287
Query: 321 NEAAALLPPKQPAFSY 336
++ L P P S+
Sbjct: 288 DD----LHPSFPEVSF 299
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 56/93 (60%), Gaps = 3/93 (3%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGT 195
I L YLH IIHRDLK NILL++DM+ +I+DFG A++ QA VGT
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 197
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
+Y+SPE + S SD+++ G ++ ++V+G
Sbjct: 198 AQYVSPELLTEKSASKSSDLWALGCIIYQLVAG 230
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 103/209 (49%), Gaps = 30/209 (14%)
Query: 42 SVSTATNKFSDANKLGEGGFGPVYKGV-LKNGDEIAVKRLSGRSGQG----------LRE 90
SV K++ K+G+G G VY + + G E+A+++++ + +RE
Sbjct: 15 SVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRE 74
Query: 91 LKNK--LRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTRVRIIEG-IA-------QGL 140
KN + L + DE ++ EY+ SL D VT + EG IA Q L
Sbjct: 75 NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT----DVVTETCMDEGQIAAVCRECLQAL 130
Query: 141 LYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMS 200
+LH ++IHR++K NILL D + K++DFG + Q+ +VGT +M+
Sbjct: 131 EFLHSN---QVIHRNIKSDNILLGMDGSVKLTDFGFC--AQITPEQSKRSTMVGTPYWMA 185
Query: 201 PEYAIQGIFSIKSDVFSFGVLLLKIVSGK 229
PE + + K D++S G++ ++++ G+
Sbjct: 186 PEVVTRKAYGPKVDIWSLGIMAIEMIEGE 214
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 102/203 (50%), Gaps = 35/203 (17%)
Query: 53 ANKLGEGGFGPVYKGVLKNGDEIAVKRL--SGRSGQGLRELKNKLRLLGCCID------- 103
++G G FG VYKG +GD +AVK L + + Q L+ KN++ +L
Sbjct: 29 GQRIGSGSFGTVYKGKW-HGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 86
Query: 104 ----KDEKILIYEYMPNKSLDFFL------FDWVTRVRIIEGIAQGLLYLHQYSRVRIIH 153
K + ++ ++ SL L F+ + I A+G+ YLH S IIH
Sbjct: 87 GYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS---IIH 143
Query: 154 RDLKVSNILLDKDMNPKISDFGIA----RICRGNELQANTGRIVGTYRYMSPE---YAIQ 206
RDLK +NI L +D KI DFG+A R ++ + +G I+ +M+PE
Sbjct: 144 RDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSIL----WMAPEVIRMQDS 199
Query: 207 GIFSIKSDVFSFGVLLLKIVSGK 229
+S +SDV++FG++L ++++G+
Sbjct: 200 NPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 101/198 (51%), Gaps = 23/198 (11%)
Query: 50 FSDANKLGEGGFGPVYKGVLKNGDEI-AVKRLS-GRSGQGLRELKNKLRLLGCCID---- 103
F+ K+G+G FG V+KG+ ++ A+K + + + +++ ++ +L C
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 88
Query: 104 -------KDEKI-LIYEYMPNKS-LDFF---LFDWVTRVRIIEGIAQGLLYLHQYSRVRI 151
KD K+ +I EY+ S LD D I+ I +GL YLH +
Sbjct: 89 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKK--- 145
Query: 152 IHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSI 211
IHRD+K +N+LL + K++DFG+A +++ NT VGT +M+PE Q +
Sbjct: 146 IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT--FVGTPFWMAPEVIKQSAYDS 203
Query: 212 KSDVFSFGVLLLKIVSGK 229
K+D++S G+ +++ G+
Sbjct: 204 KADIWSLGITAIELARGE 221
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 101/198 (51%), Gaps = 23/198 (11%)
Query: 50 FSDANKLGEGGFGPVYKGVLKNGDEI-AVKRLS-GRSGQGLRELKNKLRLLGCCID---- 103
F+ K+G+G FG V+KG+ ++ A+K + + + +++ ++ +L C
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 104 -------KDEKI-LIYEYMPNKS-LDFF---LFDWVTRVRIIEGIAQGLLYLHQYSRVRI 151
KD K+ +I EY+ S LD D I+ I +GL YLH +
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKK--- 125
Query: 152 IHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSI 211
IHRD+K +N+LL + K++DFG+A +++ NT VGT +M+PE Q +
Sbjct: 126 IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT--FVGTPFWMAPEVIKQSAYDS 183
Query: 212 KSDVFSFGVLLLKIVSGK 229
K+D++S G+ +++ G+
Sbjct: 184 KADIWSLGITAIELARGE 201
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 105/212 (49%), Gaps = 44/212 (20%)
Query: 48 NKFSDANKLGEGGFGPVYKGV-LKNGDEI----AVKRL-SGRSGQGLRELKNK------- 94
+F LG G FG VYKG+ + G+++ A+K L S + +E+ ++
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 75
Query: 95 -----LRLLGCCIDKDEKILIYEYMP-NKSLDF-----------FLFDWVTRVRIIEGIA 137
RLLG C+ + LI + MP LD+ +L +W + IA
Sbjct: 76 DNPHVCRLLGICLTSTVQ-LIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQ------IA 128
Query: 138 QGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARI--CRGNELQANTGRIVGT 195
+G+ YL R++HRDL N+L+ + KI+DFG+A++ E A G++
Sbjct: 129 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--P 183
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVS 227
++M+ E + I++ +SDV+S+GV + ++++
Sbjct: 184 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 104/225 (46%), Gaps = 38/225 (16%)
Query: 38 FSFSSVSTATNKFSDA---------NKLGEGGFGPVYKGVLKNGDE----IAVKRL-SGR 83
F+F + A +F+ +G G FG V G LK + +A+K L SG
Sbjct: 14 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 73
Query: 84 SGQGLREL------------KNKLRLLGCCIDKDEKILIYEYMPNKSLDFFL------FD 125
+ + R+ N + L G ++I E+M N SLD FL F
Sbjct: 74 TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFT 133
Query: 126 WVTRVRIIEGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNEL 185
+ V ++ GIA G+ YL + + +HRDL NIL++ ++ K+SDFG++R +
Sbjct: 134 VIQLVGMLRGIAAGMKYL---ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTS 190
Query: 186 QANTGRIVG---TYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVS 227
+G R+ +PE F+ SDV+S+G+++ +++S
Sbjct: 191 DPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 235
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 102/198 (51%), Gaps = 23/198 (11%)
Query: 50 FSDANKLGEGGFGPVYKGVLKNGDEI-AVKRLS-GRSGQGLRELKNKLRLLGCC------ 101
F+ ++G+G FG V+KG+ ++ A+K + + + +++ ++ +L C
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVT 84
Query: 102 ------IDKDEKILIYEYMPNKS-LDFFL---FDWVTRVRIIEGIAQGLLYLHQYSRVRI 151
+ + +I EY+ S LD FD +++ I +GL YLH +
Sbjct: 85 KYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKEILKGLDYLHSEKK--- 141
Query: 152 IHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSI 211
IHRD+K +N+LL + + K++DFG+A +++ NT VGT +M+PE Q +
Sbjct: 142 IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNT--FVGTPFWMAPEVIQQSAYDS 199
Query: 212 KSDVFSFGVLLLKIVSGK 229
K+D++S G+ +++ G+
Sbjct: 200 KADIWSLGITAIELAKGE 217
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 105/217 (48%), Gaps = 33/217 (15%)
Query: 37 LFSFSSVSTATNKFSDANKLGEGGFGPVYKGVLK-NGDEIAVKRLSGRSGQGLRELKNKL 95
+F S + ++++ LG+G FG V K G E AVK +S R + + ++ L
Sbjct: 15 MFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLL 74
Query: 96 RLLGCC--IDKDEKILIYEYMPNKSLDFFL-------------------FDWVTRVRIIE 134
R + +D + +YE+ +K F+L F V RII
Sbjct: 75 REVQLLKQLDHPNIMKLYEFFEDKGY-FYLVGEVYTGGELFDEIISRKRFSEVDAARIIR 133
Query: 135 GIAQGLLYLHQYSRVRIIHRDLKVSNILLD---KDMNPKISDFGIARICRGNELQANTGR 191
+ G+ Y+H + +I+HRDLK N+LL+ KD N +I DFG++ ++ +
Sbjct: 134 QVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK-- 188
Query: 192 IVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
+GT Y++PE + G + K DV+S GV+L ++SG
Sbjct: 189 -IGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 96/198 (48%), Gaps = 23/198 (11%)
Query: 50 FSDANKLGEGGFGPVYKGVLKNGDEI-AVKRLSGRSGQGLRELKNK-------------L 95
F+ +++G+G FG VYKG+ + E+ A+K + + E +
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 80
Query: 96 RLLGCCIDKDEKILIYEYMPNKS-LDFF---LFDWVTRVRIIEGIAQGLLYLHQYSRVRI 151
R G + + +I EY+ S LD + I+ I +GL YLH R
Sbjct: 81 RYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYIATILREILKGLDYLHSE---RK 137
Query: 152 IHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSI 211
IHRD+K +N+LL + + K++DFG+A +++ N VGT +M+PE Q +
Sbjct: 138 IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNX--FVGTPFWMAPEVIKQSAYDF 195
Query: 212 KSDVFSFGVLLLKIVSGK 229
K+D++S G+ +++ G+
Sbjct: 196 KADIWSLGITAIELAKGE 213
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 132/334 (39%), Gaps = 74/334 (22%)
Query: 37 LFSFSSVSTATNKFSDANKLGEGGFGPVYKG----VLKNGDEIAVKRLSGRSGQGLRE-- 90
+F + K + +LG+G FG VY+G ++K E V + LRE
Sbjct: 6 VFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 65
Query: 91 -------------LKNKLRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTR-------- 129
+ +RLLG +++ E M + L +L
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 130 -------VRIIEGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRG 182
+++ IA G+ YL+ + +HRDL N ++ D KI DFG+ R
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYE 182
Query: 183 NELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGKKTTGFYRTYSFTL 242
+ G+ + R+M+PE G+F+ SD++SFGV+L +I S + + Y
Sbjct: 183 TDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAE-----QPYQ--- 234
Query: 243 LGYISENIYEFPSVDTHNVKTFGFLHLTIFKLFSISSVGLSNDIVCLCILRYVNIALLCV 302
G +E + +F V G+L D C R ++ +C
Sbjct: 235 -GLSNEQVLKF-------VMDGGYL-----------------DQPDNCPERVTDLMRMCW 269
Query: 303 QESADDRPTMNDVVSMLTNEAAALLPPKQPAFSY 336
Q + RPT ++V++L ++ L P P S+
Sbjct: 270 QFNPKMRPTFLEIVNLLKDD----LHPSFPEVSF 299
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 105/212 (49%), Gaps = 44/212 (20%)
Query: 48 NKFSDANKLGEGGFGPVYKGV-LKNGDEI----AVKRL-SGRSGQGLRELKNK------- 94
+F LG G FG VYKG+ + G+++ A+K L S + +E+ ++
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 95 -----LRLLGCCIDKDEKILIYEYMP-NKSLDF-----------FLFDWVTRVRIIEGIA 137
RLLG C+ + LI + MP LD+ +L +W + IA
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQ------IA 127
Query: 138 QGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARI--CRGNELQANTGRIVGT 195
+G+ YL R++HRDL N+L+ + KI+DFG+A++ E A G++
Sbjct: 128 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--P 182
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVS 227
++M+ E + I++ +SDV+S+GV + ++++
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 70/135 (51%), Gaps = 11/135 (8%)
Query: 101 CIDKDEKILI-YEYMPNKSLDFFL-----FDWV-TRVRIIEGIAQGLLYLHQYSRVRIIH 153
C DEK+ Y N L ++ FD TR E I L YLH IIH
Sbjct: 105 CFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE-IVSALEYLHGKG---IIH 160
Query: 154 RDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKS 213
RDLK NILL++DM+ +I+DFG A++ QA VGT +Y+SPE + S
Sbjct: 161 RDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS 220
Query: 214 DVFSFGVLLLKIVSG 228
D+++ G ++ ++V+G
Sbjct: 221 DLWALGCIIYQLVAG 235
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 136/311 (43%), Gaps = 72/311 (23%)
Query: 44 STATNKFSDANKLGEGGFGPVYKG-VLKNGDEIAVKRLSGRSGQGLREL----------- 91
+ A N+ ++G+GGFG V+KG ++K+ +A+K L +G E+
Sbjct: 15 TLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREV 74
Query: 92 --------KNKLRLLGCCIDKDEKILIYEYMPNKSLDFFLFD------WVTRVRIIEGIA 137
N ++L G + ++ E++P L L D W ++R++ IA
Sbjct: 75 FIMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIA 132
Query: 138 QGLLYLHQYSRVRIIHRDLKVSNILLDK-DMN----PKISDFGIARICRGNELQANTGRI 192
G+ Y+ Q I+HRDL+ NI L D N K++DFG+++ + + +G +
Sbjct: 133 LGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ----QSVHSVSG-L 186
Query: 193 VGTYRYMSPEY--AIQGIFSIKSDVFSFGVLLLKIVSGKKTTGFYRTYSFTLLGYISENI 250
+G +++M+PE A + ++ K+D +SF ++L I++G+ G + YS+ + +I+
Sbjct: 187 LGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGE---GPFDEYSYGKIKFIN--- 240
Query: 251 YEFPSVDTHNVKTFGFLHLTIFKLFSISSVGLSNDIVCLCILRYVNIALLCVQESADDRP 310
I GL I C R N+ LC RP
Sbjct: 241 -------------------------MIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRP 275
Query: 311 TMNDVVSMLTN 321
+ +V L+
Sbjct: 276 HFSYIVKELSE 286
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 105/212 (49%), Gaps = 44/212 (20%)
Query: 48 NKFSDANKLGEGGFGPVYKGV-LKNGDEI----AVKRL-SGRSGQGLRELKNK------- 94
+F LG G FG VYKG+ + G+++ A+K L S + +E+ ++
Sbjct: 12 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 71
Query: 95 -----LRLLGCCIDKDEKILIYEYMPNKSL-DF-----------FLFDWVTRVRIIEGIA 137
RLLG C+ + LI + MP L D+ +L +W + IA
Sbjct: 72 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 124
Query: 138 QGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARI--CRGNELQANTGRIVGT 195
+G+ YL R++HRDL N+L+ + KI+DFG+A++ E A G++
Sbjct: 125 EGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--P 179
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVS 227
++M+ E + I++ +SDV+S+GV + ++++
Sbjct: 180 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 211
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 105/217 (48%), Gaps = 33/217 (15%)
Query: 37 LFSFSSVSTATNKFSDANKLGEGGFGPVYKGVLK-NGDEIAVKRLSGRSGQGLRELKNKL 95
+F S + ++++ LG+G FG V K G E AVK +S R + + ++ L
Sbjct: 21 MFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLL 80
Query: 96 RLLGCC--IDKDEKILIYEYMPNKSLDFFL-------------------FDWVTRVRIIE 134
R + +D + +YE+ +K F+L F V RII
Sbjct: 81 REVQLLKQLDHPNIMKLYEFFEDKGY-FYLVGEVYTGGELFDEIISRKRFSEVDAARIIR 139
Query: 135 GIAQGLLYLHQYSRVRIIHRDLKVSNILLD---KDMNPKISDFGIARICRGNELQANTGR 191
+ G+ Y+H + +I+HRDLK N+LL+ KD N +I DFG++ ++ +
Sbjct: 140 QVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK-- 194
Query: 192 IVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
+GT Y++PE + G + K DV+S GV+L ++SG
Sbjct: 195 -IGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 229
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 105/212 (49%), Gaps = 44/212 (20%)
Query: 48 NKFSDANKLGEGGFGPVYKGV-LKNGDEI----AVKRL-SGRSGQGLRELKNK------- 94
+F LG G FG VYKG+ + G+++ A+K L S + +E+ ++
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 75
Query: 95 -----LRLLGCCIDKDEKILIYEYMPNKSL-DF-----------FLFDWVTRVRIIEGIA 137
RLLG C+ + LI + MP L D+ +L +W + IA
Sbjct: 76 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 128
Query: 138 QGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARI--CRGNELQANTGRIVGT 195
+G+ YL R++HRDL N+L+ + KI+DFG+A++ E A G++
Sbjct: 129 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--P 183
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVS 227
++M+ E + I++ +SDV+S+GV + ++++
Sbjct: 184 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 100/201 (49%), Gaps = 31/201 (15%)
Query: 53 ANKLGEGGFGPVYKGVLKNGDEIAVKRLSGRSGQGLRELKNKLRLLGCC----------- 101
+ ++G G FG VYKG + + ++ + + + +N++ +L
Sbjct: 41 STRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGY 100
Query: 102 IDKDEKILIYEYMPNKSLDFFLFDWVTRVRIIEGI------AQGLLYLHQYSRVRIIHRD 155
+ KD ++ ++ SL L T+ ++ + I AQG+ YLH + IIHRD
Sbjct: 101 MTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKN---IIHRD 157
Query: 156 LKVSNILLDKDMNPKISDFGIA----RICRGNELQANTGRIVGTYRYMSPE---YAIQGI 208
+K +NI L + + KI DFG+A R +++ TG ++ +M+PE
Sbjct: 158 MKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVL----WMAPEVIRMQDNNP 213
Query: 209 FSIKSDVFSFGVLLLKIVSGK 229
FS +SDV+S+G++L ++++G+
Sbjct: 214 FSFQSDVYSYGIVLYELMTGE 234
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 127/316 (40%), Gaps = 74/316 (23%)
Query: 55 KLGEGGFGPVYKG----VLKNGDEIAVKRLSGRSGQGLRE---------------LKNKL 95
+LG+G FG VY+G ++K E V + LRE + +
Sbjct: 23 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 82
Query: 96 RLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTR---------------VRIIEGIAQGL 140
RLLG +++ E M + L +L +++ IA G+
Sbjct: 83 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 142
Query: 141 LYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMS 200
YL+ + +HRDL N ++ D KI DFG+ R + G+ + R+M+
Sbjct: 143 AYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 199
Query: 201 PEYAIQGIFSIKSDVFSFGVLLLKIVSGKKTTGFYRTYSFTLLGYISENIYEFPSVDTHN 260
PE G+F+ SD++SFGV+L +I S + + Y G +E + +F
Sbjct: 200 PESLKDGVFTTSSDMWSFGVVLWEITSLAE-----QPYQ----GLSNEQVLKF------- 243
Query: 261 VKTFGFLHLTIFKLFSISSVGLSNDIVCLCILRYVNIALLCVQESADDRPTMNDVVSMLT 320
V G+L D C R ++ +C Q + RPT ++V++L
Sbjct: 244 VMDGGYL-----------------DQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 286
Query: 321 NEAAALLPPKQPAFSY 336
++ L P P S+
Sbjct: 287 DD----LHPSFPEVSF 298
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 105/212 (49%), Gaps = 44/212 (20%)
Query: 48 NKFSDANKLGEGGFGPVYKGV-LKNGDEI----AVKRL-SGRSGQGLRELKNK------- 94
+F LG G FG VYKG+ + G+++ A+K L S + +E+ ++
Sbjct: 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 68
Query: 95 -----LRLLGCCIDKDEKILIYEYMPNKSL-DF-----------FLFDWVTRVRIIEGIA 137
RLLG C+ + LI + MP L D+ +L +W + IA
Sbjct: 69 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 121
Query: 138 QGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARI--CRGNELQANTGRIVGT 195
+G+ YL R++HRDL N+L+ + KI+DFG+A++ E A G++
Sbjct: 122 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--P 176
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVS 227
++M+ E + I++ +SDV+S+GV + ++++
Sbjct: 177 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 208
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 103/223 (46%), Gaps = 58/223 (26%)
Query: 49 KFSDANKLGEGGFGPVYKGVLKNGD---EIAVKRLSGRSGQG--------------LREL 91
KF D +GEG FG V K +K + A+KR+ + + L
Sbjct: 28 KFQDV--IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHH 85
Query: 92 KNKLRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTRVRIIE----------------- 134
N + LLG C + L EY P+ +L D++ + R++E
Sbjct: 86 PNIINLLGACEHRGYLYLAIEYAPHGNL----LDFLRKSRVLETDPAFAIANSTASTLSS 141
Query: 135 --------GIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNE-- 184
+A+G+ YL S+ + IHRDL NIL+ ++ KI+DFG++ RG E
Sbjct: 142 QQLLHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLS---RGQEVY 195
Query: 185 LQANTGRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVS 227
++ GR+ R+M+ E +++ SDV+S+GVLL +IVS
Sbjct: 196 VKKTMGRL--PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 103/223 (46%), Gaps = 58/223 (26%)
Query: 49 KFSDANKLGEGGFGPVYKGVLKNGD---EIAVKRLSGRSGQG--------------LREL 91
KF D +GEG FG V K +K + A+KR+ + + L
Sbjct: 18 KFQDV--IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHH 75
Query: 92 KNKLRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTRVRIIE----------------- 134
N + LLG C + L EY P+ +L D++ + R++E
Sbjct: 76 PNIINLLGACEHRGYLYLAIEYAPHGNL----LDFLRKSRVLETDPAFAIANSTASTLSS 131
Query: 135 --------GIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNE-- 184
+A+G+ YL S+ + IHRDL NIL+ ++ KI+DFG++ RG E
Sbjct: 132 QQLLHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLS---RGQEVY 185
Query: 185 LQANTGRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVS 227
++ GR+ R+M+ E +++ SDV+S+GVLL +IVS
Sbjct: 186 VKKTMGRL--PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 105/212 (49%), Gaps = 44/212 (20%)
Query: 48 NKFSDANKLGEGGFGPVYKGV-LKNGDEI----AVKRL-SGRSGQGLRELKNK------- 94
+F LG G FG VYKG+ + G+++ A+K L S + +E+ ++
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 95 -----LRLLGCCIDKDEKILIYEYMPNKSL-DF-----------FLFDWVTRVRIIEGIA 137
RLLG C+ + LI + MP L D+ +L +W + IA
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 127
Query: 138 QGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARI--CRGNELQANTGRIVGT 195
+G+ YL R++HRDL N+L+ + KI+DFG+A++ E A G++
Sbjct: 128 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--P 182
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVS 227
++M+ E + I++ +SDV+S+GV + ++++
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 55/93 (59%), Gaps = 3/93 (3%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGT 195
I L YLH IIHRDLK NILL++DM+ +I+DFG A++ QA VGT
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
+Y+SPE + SD+++ G ++ ++V+G
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 55/93 (59%), Gaps = 3/93 (3%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGT 195
I L YLH IIHRDLK NILL++DM+ +I+DFG A++ QA VGT
Sbjct: 142 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 198
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
+Y+SPE + SD+++ G ++ ++V+G
Sbjct: 199 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 55/93 (59%), Gaps = 3/93 (3%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGT 195
I L YLH IIHRDLK NILL++DM+ +I+DFG A++ QA VGT
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
+Y+SPE + SD+++ G ++ ++V+G
Sbjct: 198 AQYVSPELLTEKSAXKSSDLWALGCIIYQLVAG 230
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 65/121 (53%), Gaps = 5/121 (4%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGT 195
I L YLH IIHRDLK NILL++DM+ +I+DFG A++ QA VGT
Sbjct: 144 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 200
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGKKTTGFYRTYSFTLLGYISENIYEFPS 255
+Y+SPE + SD+++ G ++ ++V+G F + + I + Y+FP+
Sbjct: 201 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG--LPPFRAGNEYLIFQKIIKLEYDFPA 258
Query: 256 V 256
Sbjct: 259 A 259
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 55/93 (59%), Gaps = 3/93 (3%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGT 195
I L YLH IIHRDLK NILL++DM+ +I+DFG A++ QA VGT
Sbjct: 139 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
+Y+SPE + SD+++ G ++ ++V+G
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 55/93 (59%), Gaps = 3/93 (3%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGT 195
I L YLH IIHRDLK NILL++DM+ +I+DFG A++ QA VGT
Sbjct: 116 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 172
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
+Y+SPE + SD+++ G ++ ++V+G
Sbjct: 173 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 205
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 55/93 (59%), Gaps = 3/93 (3%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGT 195
I L YLH IIHRDLK NILL++DM+ +I+DFG A++ QA VGT
Sbjct: 119 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 175
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
+Y+SPE + SD+++ G ++ ++V+G
Sbjct: 176 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 208
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 105/212 (49%), Gaps = 44/212 (20%)
Query: 48 NKFSDANKLGEGGFGPVYKGV-LKNGDEI----AVKRL-SGRSGQGLRELKNK------- 94
+F LG G FG VYKG+ + G+++ A+K L S + +E+ ++
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 95 -----LRLLGCCIDKDEKILIYEYMPNKSL-DF-----------FLFDWVTRVRIIEGIA 137
RLLG C+ + LI + MP L D+ +L +W + IA
Sbjct: 77 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 129
Query: 138 QGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARI--CRGNELQANTGRIVGT 195
+G+ YL R++HRDL N+L+ + KI+DFG+A++ E A G++
Sbjct: 130 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--P 184
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVS 227
++M+ E + I++ +SDV+S+GV + ++++
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 55/93 (59%), Gaps = 3/93 (3%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGT 195
I L YLH IIHRDLK NILL++DM+ +I+DFG A++ QA VGT
Sbjct: 139 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
+Y+SPE + SD+++ G ++ ++V+G
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 105/212 (49%), Gaps = 44/212 (20%)
Query: 48 NKFSDANKLGEGGFGPVYKGV-LKNGDEI----AVKRL-SGRSGQGLRELKNK------- 94
+F LG G FG VYKG+ + G+++ A+K L S + +E+ ++
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 95 -----LRLLGCCIDKDEKILIYEYMPNKSL-DF-----------FLFDWVTRVRIIEGIA 137
RLLG C+ + LI + MP L D+ +L +W + IA
Sbjct: 78 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 130
Query: 138 QGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARI--CRGNELQANTGRIVGT 195
+G+ YL R++HRDL N+L+ + KI+DFG+A++ E A G++
Sbjct: 131 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--P 185
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVS 227
++M+ E + I++ +SDV+S+GV + ++++
Sbjct: 186 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 55/93 (59%), Gaps = 3/93 (3%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGT 195
I L YLH IIHRDLK NILL++DM+ +I+DFG A++ QA VGT
Sbjct: 139 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
+Y+SPE + SD+++ G ++ ++V+G
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 55/93 (59%), Gaps = 3/93 (3%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGT 195
I L YLH IIHRDLK NILL++DM+ +I+DFG A++ QA VGT
Sbjct: 142 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 198
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
+Y+SPE + SD+++ G ++ ++V+G
Sbjct: 199 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 55/93 (59%), Gaps = 3/93 (3%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGT 195
I L YLH IIHRDLK NILL++DM+ +I+DFG A++ QA VGT
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
+Y+SPE + SD+++ G ++ ++V+G
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 105/212 (49%), Gaps = 44/212 (20%)
Query: 48 NKFSDANKLGEGGFGPVYKGV-LKNGDEI----AVKRL-SGRSGQGLRELKNK------- 94
+F LG G FG VYKG+ + G+++ A+K L S + +E+ ++
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 78
Query: 95 -----LRLLGCCIDKDEKILIYEYMPNKSL-DF-----------FLFDWVTRVRIIEGIA 137
RLLG C+ + LI + MP L D+ +L +W + IA
Sbjct: 79 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 131
Query: 138 QGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARI--CRGNELQANTGRIVGT 195
+G+ YL R++HRDL N+L+ + KI+DFG+A++ E A G++
Sbjct: 132 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--P 186
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVS 227
++M+ E + I++ +SDV+S+GV + ++++
Sbjct: 187 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 55/93 (59%), Gaps = 3/93 (3%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGT 195
I L YLH IIHRDLK NILL++DM+ +I+DFG A++ QA VGT
Sbjct: 118 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 174
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
+Y+SPE + SD+++ G ++ ++V+G
Sbjct: 175 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 207
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 126/316 (39%), Gaps = 74/316 (23%)
Query: 55 KLGEGGFGPVYKG----VLKNGDEIAVKRLSGRSGQGLRE---------------LKNKL 95
+LG+G FG VY+G ++K E V + LRE + +
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 96 RLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTR---------------VRIIEGIAQGL 140
RLLG +++ E M + L +L +++ IA G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 141 LYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMS 200
YL+ + +HRDL N ++ D KI DFG+ R G+ + R+M+
Sbjct: 144 AYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWMA 200
Query: 201 PEYAIQGIFSIKSDVFSFGVLLLKIVSGKKTTGFYRTYSFTLLGYISENIYEFPSVDTHN 260
PE G+F+ SD++SFGV+L +I S + + Y G +E + +F
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEITSLAE-----QPYQ----GLSNEQVLKF------- 244
Query: 261 VKTFGFLHLTIFKLFSISSVGLSNDIVCLCILRYVNIALLCVQESADDRPTMNDVVSMLT 320
V G+L D C R ++ +C Q + RPT ++V++L
Sbjct: 245 VMDGGYL-----------------DQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 287
Query: 321 NEAAALLPPKQPAFSY 336
++ L P P S+
Sbjct: 288 DD----LHPSFPEVSF 299
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 55/93 (59%), Gaps = 3/93 (3%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGT 195
I L YLH IIHRDLK NILL++DM+ +I+DFG A++ QA VGT
Sbjct: 117 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 173
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
+Y+SPE + SD+++ G ++ ++V+G
Sbjct: 174 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 206
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 55/93 (59%), Gaps = 3/93 (3%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGT 195
I L YLH IIHRDLK NILL++DM+ +I+DFG A++ QA VGT
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
+Y+SPE + SD+++ G ++ ++V+G
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 55/93 (59%), Gaps = 3/93 (3%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGT 195
I L YLH IIHRDLK NILL++DM+ +I+DFG A++ QA VGT
Sbjct: 139 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGT 195
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
+Y+SPE + SD+++ G ++ ++V+G
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 105/212 (49%), Gaps = 44/212 (20%)
Query: 48 NKFSDANKLGEGGFGPVYKGV-LKNGDEI----AVKRL-SGRSGQGLRELKNK------- 94
+F LG G FG VYKG+ + G+++ A+K L S + +E+ ++
Sbjct: 21 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 80
Query: 95 -----LRLLGCCIDKDEKILIYEYMPNKSL-DF-----------FLFDWVTRVRIIEGIA 137
RLLG C+ + LI + MP L D+ +L +W + IA
Sbjct: 81 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 133
Query: 138 QGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARI--CRGNELQANTGRIVGT 195
+G+ YL R++HRDL N+L+ + KI+DFG+A++ E A G++
Sbjct: 134 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--P 188
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVS 227
++M+ E + I++ +SDV+S+GV + ++++
Sbjct: 189 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 220
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 55/93 (59%), Gaps = 3/93 (3%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGT 195
I L YLH IIHRDLK NILL++DM+ +I+DFG A++ QA VGT
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
+Y+SPE + SD+++ G ++ ++V+G
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 55/93 (59%), Gaps = 3/93 (3%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGT 195
I L YLH IIHRDLK NILL++DM+ +I+DFG A++ QA VGT
Sbjct: 123 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 179
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
+Y+SPE + SD+++ G ++ ++V+G
Sbjct: 180 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 212
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 105/212 (49%), Gaps = 44/212 (20%)
Query: 48 NKFSDANKLGEGGFGPVYKGV-LKNGDEI----AVKRL-SGRSGQGLRELKNK------- 94
+F LG G FG VYKG+ + G+++ A+K L S + +E+ ++
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 95 -----LRLLGCCIDKDEKILIYEYMPNKSL-DF-----------FLFDWVTRVRIIEGIA 137
RLLG C+ + LI + MP L D+ +L +W + IA
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 127
Query: 138 QGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARI--CRGNELQANTGRIVGT 195
+G+ YL R++HRDL N+L+ + KI+DFG+A++ E A G++
Sbjct: 128 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--P 182
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVS 227
++M+ E + I++ +SDV+S+GV + ++++
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 105/212 (49%), Gaps = 44/212 (20%)
Query: 48 NKFSDANKLGEGGFGPVYKGV-LKNGDEI----AVKRL-SGRSGQGLRELKNK------- 94
+F LG G FG VYKG+ + G+++ A+K L S + +E+ ++
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 95 -----LRLLGCCIDKDEKILIYEYMPNKSL-DF-----------FLFDWVTRVRIIEGIA 137
RLLG C+ + LI + MP L D+ +L +W + IA
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 127
Query: 138 QGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARI--CRGNELQANTGRIVGT 195
+G+ YL R++HRDL N+L+ + KI+DFG+A++ E A G++
Sbjct: 128 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--P 182
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVS 227
++M+ E + I++ +SDV+S+GV + ++++
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 105/212 (49%), Gaps = 44/212 (20%)
Query: 48 NKFSDANKLGEGGFGPVYKGV-LKNGDEI----AVKRL-SGRSGQGLRELKNK------- 94
+F LG G FG VYKG+ + G+++ A+K L S + +E+ ++
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 95 -----LRLLGCCIDKDEKILIYEYMPNKSL-DF-----------FLFDWVTRVRIIEGIA 137
RLLG C+ + LI + MP L D+ +L +W + IA
Sbjct: 78 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 130
Query: 138 QGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARI--CRGNELQANTGRIVGT 195
+G+ YL R++HRDL N+L+ + KI+DFG+A++ E A G++
Sbjct: 131 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--P 185
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVS 227
++M+ E + I++ +SDV+S+GV + ++++
Sbjct: 186 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 105/212 (49%), Gaps = 44/212 (20%)
Query: 48 NKFSDANKLGEGGFGPVYKGV-LKNGDEI----AVKRL-SGRSGQGLRELKNK------- 94
+F LG G FG VYKG+ + G+++ A+K L S + +E+ ++
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 95 -----LRLLGCCIDKDEKILIYEYMPNKSL-DF-----------FLFDWVTRVRIIEGIA 137
RLLG C+ + LI + MP L D+ +L +W + IA
Sbjct: 78 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 130
Query: 138 QGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARI--CRGNELQANTGRIVGT 195
+G+ YL R++HRDL N+L+ + KI+DFG+A++ E A G++
Sbjct: 131 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--P 185
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVS 227
++M+ E + I++ +SDV+S+GV + ++++
Sbjct: 186 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 105/217 (48%), Gaps = 33/217 (15%)
Query: 37 LFSFSSVSTATNKFSDANKLGEGGFGPVYKGVLK-NGDEIAVKRLSGRSGQGLRELKNKL 95
+F S + ++++ LG+G FG V K G E AVK +S R + + ++ L
Sbjct: 38 MFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLL 97
Query: 96 RLLGCC--IDKDEKILIYEYMPNKSLDFFL-------------------FDWVTRVRIIE 134
R + +D + +YE+ +K F+L F V RII
Sbjct: 98 REVQLLKQLDHPNIMKLYEFFEDKGY-FYLVGEVYTGGELFDEIISRKRFSEVDAARIIR 156
Query: 135 GIAQGLLYLHQYSRVRIIHRDLKVSNILLD---KDMNPKISDFGIARICRGNELQANTGR 191
+ G+ Y+H + +I+HRDLK N+LL+ KD N +I DFG++ ++ +
Sbjct: 157 QVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK-- 211
Query: 192 IVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
+GT Y++PE + G + K DV+S GV+L ++SG
Sbjct: 212 -IGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 246
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 105/212 (49%), Gaps = 44/212 (20%)
Query: 48 NKFSDANKLGEGGFGPVYKGV-LKNGDEI----AVKRL-SGRSGQGLRELKNK------- 94
+F LG G FG VYKG+ + G+++ A+K L S + +E+ ++
Sbjct: 25 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 84
Query: 95 -----LRLLGCCIDKDEKILIYEYMPNKSL-DF-----------FLFDWVTRVRIIEGIA 137
RLLG C+ + LI + MP L D+ +L +W + IA
Sbjct: 85 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 137
Query: 138 QGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARI--CRGNELQANTGRIVGT 195
+G+ YL R++HRDL N+L+ + KI+DFG+A++ E A G++
Sbjct: 138 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--P 192
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVS 227
++M+ E + I++ +SDV+S+GV + ++++
Sbjct: 193 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 224
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 105/212 (49%), Gaps = 44/212 (20%)
Query: 48 NKFSDANKLGEGGFGPVYKGV-LKNGDEI----AVKRL-SGRSGQGLRELKNK------- 94
+F LG G FG VYKG+ + G+++ A+K L S + +E+ ++
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 95 -----LRLLGCCIDKDEKILIYEYMPNKSL-DF-----------FLFDWVTRVRIIEGIA 137
RLLG C+ + LI + MP L D+ +L +W + IA
Sbjct: 77 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 129
Query: 138 QGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARI--CRGNELQANTGRIVGT 195
+G+ YL R++HRDL N+L+ + KI+DFG+A++ E A G++
Sbjct: 130 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--P 184
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVS 227
++M+ E + I++ +SDV+S+GV + ++++
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 55/93 (59%), Gaps = 3/93 (3%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGT 195
I L YLH IIHRDLK NILL++DM+ +I+DFG A++ QA VGT
Sbjct: 138 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 194
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
+Y+SPE + SD+++ G ++ ++V+G
Sbjct: 195 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 55/93 (59%), Gaps = 3/93 (3%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGT 195
I L YLH IIHRDLK NILL++DM+ +I+DFG A++ QA VGT
Sbjct: 138 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 194
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
+Y+SPE + SD+++ G ++ ++V+G
Sbjct: 195 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 105/212 (49%), Gaps = 44/212 (20%)
Query: 48 NKFSDANKLGEGGFGPVYKGV-LKNGDEI----AVKRL-SGRSGQGLRELKNK------- 94
+F LG G FG VYKG+ + G+++ A+K L S + +E+ ++
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 95 -----LRLLGCCIDKDEKILIYEYMPNKSL-DF-----------FLFDWVTRVRIIEGIA 137
RLLG C+ + LI + MP L D+ +L +W + IA
Sbjct: 78 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 130
Query: 138 QGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARI--CRGNELQANTGRIVGT 195
+G+ YL R++HRDL N+L+ + KI+DFG+A++ E A G++
Sbjct: 131 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--P 185
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVS 227
++M+ E + I++ +SDV+S+GV + ++++
Sbjct: 186 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 135/311 (43%), Gaps = 72/311 (23%)
Query: 44 STATNKFSDANKLGEGGFGPVYKG-VLKNGDEIAVKRLSGRSGQGLREL----------- 91
+ A N+ ++G+GGFG V+KG ++K+ +A+K L +G E+
Sbjct: 15 TLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREV 74
Query: 92 --------KNKLRLLGCCIDKDEKILIYEYMPNKSLDFFLFD------WVTRVRIIEGIA 137
N ++L G + ++ E++P L L D W ++R++ IA
Sbjct: 75 FIMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIA 132
Query: 138 QGLLYLHQYSRVRIIHRDLKVSNILLDK-DMN----PKISDFGIARICRGNELQANTGRI 192
G+ Y+ Q I+HRDL+ NI L D N K++DFG ++ + + +G +
Sbjct: 133 LGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ----QSVHSVSG-L 186
Query: 193 VGTYRYMSPEY--AIQGIFSIKSDVFSFGVLLLKIVSGKKTTGFYRTYSFTLLGYISENI 250
+G +++M+PE A + ++ K+D +SF ++L I++G+ G + YS+ + +I+
Sbjct: 187 LGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGE---GPFDEYSYGKIKFIN--- 240
Query: 251 YEFPSVDTHNVKTFGFLHLTIFKLFSISSVGLSNDIVCLCILRYVNIALLCVQESADDRP 310
I GL I C R N+ LC RP
Sbjct: 241 -------------------------MIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRP 275
Query: 311 TMNDVVSMLTN 321
+ +V L+
Sbjct: 276 HFSYIVKELSE 286
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 105/217 (48%), Gaps = 33/217 (15%)
Query: 37 LFSFSSVSTATNKFSDANKLGEGGFGPVYKGVLK-NGDEIAVKRLSGRSGQGLRELKNKL 95
+F S + ++++ LG+G FG V K G E AVK +S R + + ++ L
Sbjct: 39 MFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLL 98
Query: 96 RLLGCC--IDKDEKILIYEYMPNKSLDFFL-------------------FDWVTRVRIIE 134
R + +D + +YE+ +K F+L F V RII
Sbjct: 99 REVQLLKQLDHPNIMKLYEFFEDKGY-FYLVGEVYTGGELFDEIISRKRFSEVDAARIIR 157
Query: 135 GIAQGLLYLHQYSRVRIIHRDLKVSNILLD---KDMNPKISDFGIARICRGNELQANTGR 191
+ G+ Y+H + +I+HRDLK N+LL+ KD N +I DFG++ ++ +
Sbjct: 158 QVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK-- 212
Query: 192 IVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
+GT Y++PE + G + K DV+S GV+L ++SG
Sbjct: 213 -IGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 247
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 105/212 (49%), Gaps = 44/212 (20%)
Query: 48 NKFSDANKLGEGGFGPVYKGV-LKNGDEI----AVKRL-SGRSGQGLRELKNK------- 94
+F LG G FG VYKG+ + G+++ A+K L S + +E+ ++
Sbjct: 40 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 99
Query: 95 -----LRLLGCCIDKDEKILIYEYMPNKSL-DF-----------FLFDWVTRVRIIEGIA 137
RLLG C+ + LI + MP L D+ +L +W + IA
Sbjct: 100 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 152
Query: 138 QGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARI--CRGNELQANTGRIVGT 195
+G+ YL R++HRDL N+L+ + KI+DFG+A++ E A G++
Sbjct: 153 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--P 207
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVS 227
++M+ E + I++ +SDV+S+GV + ++++
Sbjct: 208 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 239
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 128/316 (40%), Gaps = 74/316 (23%)
Query: 55 KLGEGGFGPVYKG----VLKNGDEIAVKRLSGRSGQGLRE---------------LKNKL 95
+LG+G FG VY+G ++K E V + LRE + +
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 96 RLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTR---------------VRIIEGIAQGL 140
RLLG +++ E M + L +L +++ IA G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 141 LYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMS 200
YL+ + +HR+L N ++ D KI DFG+ R + G+ + R+M+
Sbjct: 144 AYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 200
Query: 201 PEYAIQGIFSIKSDVFSFGVLLLKIVSGKKTTGFYRTYSFTLLGYISENIYEFPSVDTHN 260
PE G+F+ SD++SFGV+L +I S + + Y G +E + +F
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEITSLAE-----QPYQ----GLSNEQVLKF------- 244
Query: 261 VKTFGFLHLTIFKLFSISSVGLSNDIVCLCILRYVNIALLCVQESADDRPTMNDVVSMLT 320
V G+L D C R ++ +C Q + + RPT ++V++L
Sbjct: 245 VMDGGYL-----------------DQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLK 287
Query: 321 NEAAALLPPKQPAFSY 336
++ L P P S+
Sbjct: 288 DD----LHPSFPEVSF 299
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 105/212 (49%), Gaps = 44/212 (20%)
Query: 48 NKFSDANKLGEGGFGPVYKGV-LKNGDEI----AVKRL-SGRSGQGLRELKNK------- 94
+F LG G FG VYKG+ + G+++ A+K L S + +E+ ++
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 95 -----LRLLGCCIDKDEKILIYEYMPNKSL-DF-----------FLFDWVTRVRIIEGIA 137
RLLG C+ + LI + MP L D+ +L +W + IA
Sbjct: 82 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 134
Query: 138 QGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARI--CRGNELQANTGRIVGT 195
+G+ YL R++HRDL N+L+ + KI+DFG+A++ E A G++
Sbjct: 135 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--P 189
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVS 227
++M+ E + I++ +SDV+S+GV + ++++
Sbjct: 190 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 128/316 (40%), Gaps = 74/316 (23%)
Query: 55 KLGEGGFGPVYKG----VLKNGDEIAVKRLSGRSGQGLRE---------------LKNKL 95
+LG+G FG VY+G ++K E V + LRE + +
Sbjct: 25 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 84
Query: 96 RLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTR---------------VRIIEGIAQGL 140
RLLG +++ E M + L +L +++ IA G+
Sbjct: 85 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 144
Query: 141 LYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMS 200
YL+ + +HR+L N ++ D KI DFG+ R + G+ + R+M+
Sbjct: 145 AYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 201
Query: 201 PEYAIQGIFSIKSDVFSFGVLLLKIVSGKKTTGFYRTYSFTLLGYISENIYEFPSVDTHN 260
PE G+F+ SD++SFGV+L +I S + + Y G +E + +F
Sbjct: 202 PESLKDGVFTTSSDMWSFGVVLWEITSLAE-----QPYQ----GLSNEQVLKF------- 245
Query: 261 VKTFGFLHLTIFKLFSISSVGLSNDIVCLCILRYVNIALLCVQESADDRPTMNDVVSMLT 320
V G+L D C R ++ +C Q + + RPT ++V++L
Sbjct: 246 VMDGGYL-----------------DQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLK 288
Query: 321 NEAAALLPPKQPAFSY 336
++ L P P S+
Sbjct: 289 DD----LHPSFPEVSF 300
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 103/205 (50%), Gaps = 39/205 (19%)
Query: 53 ANKLGEGGFGPVYKGVLKNGDEIAVKRL--SGRSGQGLRELKNKLRLLGCCIDKDEKILI 110
++G G FG VYKG +GD +AVK L + + Q L+ KN++ +L + IL+
Sbjct: 29 GQRIGSGSFGTVYKGKW-HGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKT--RHVNILL 84
Query: 111 Y-------------EYMPNKSLDFFL------FDWVTRVRIIEGIAQGLLYLHQYSRVRI 151
+ ++ SL L F+ + I A+G+ YLH S I
Sbjct: 85 FMGYSTAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS---I 141
Query: 152 IHRDLKVSNILLDKDMNPKISDFGIA----RICRGNELQANTGRIVGTYRYMSPE---YA 204
IHRDLK +NI L +D KI DFG+A R ++ + +G I+ +M+PE
Sbjct: 142 IHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSIL----WMAPEVIRMQ 197
Query: 205 IQGIFSIKSDVFSFGVLLLKIVSGK 229
+S +SDV++FG++L ++++G+
Sbjct: 198 DSNPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 126/298 (42%), Gaps = 65/298 (21%)
Query: 56 LGEGGFG--------PVYKGVLKNGDEIAVKRLSGRSG----QGLRELKNKLRLL----- 98
LGEG FG P G G+ +AVK L G G ++ + LR L
Sbjct: 22 LGEGHFGKVSLYCYDPTNDG---TGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHI 78
Query: 99 ----GCCIDKDEK--ILIYEYMPNKSLDFFLFDWVTRVRI--------IEGIAQGLLYLH 144
GCC D+ EK L+ EY+P SL D++ R I + I +G+ YLH
Sbjct: 79 IKYKGCCEDQGEKSLQLVMEYVPLGSLR----DYLPRHSIGLAQLLLFAQQICEGMAYLH 134
Query: 145 QYSRVRIIHRDLKVSNILLDKDMNPKISDFGIAR-ICRGNELQANTGRIVGTYRYMSPEY 203
IHR+L N+LLD D KI DFG+A+ + G+E + +PE
Sbjct: 135 S---QHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPEC 191
Query: 204 AIQGIFSIKSDVFSFGVLLLKIVSGKKTTGFYRTYSFTLLGYISENIYEFPSVDTHNVKT 263
+ F SDV+SFGV L ++++ ++ T L+G I++
Sbjct: 192 LKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIG-IAQG-------------- 236
Query: 264 FGFLHLTIFKLFSISSVG--LSNDIVCLCILRYVNIALLCVQESADDRPTMNDVVSML 319
+T+ +L + G L C C + ++ C + A RPT +++ +L
Sbjct: 237 ----QMTVLRLTELLERGERLPRPDKCPCEV--YHLMKNCWETEASFRPTFENLIPIL 288
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 122/294 (41%), Gaps = 57/294 (19%)
Query: 56 LGEGGFG--------PVYKGVLKNGDEIAVKRLSGRSGQGLRELKNK----LRLL----- 98
LGEG FG P G G+ +AVK L G LR + LR L
Sbjct: 16 LGEGHFGKVSLYCYDPTNDG---TGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHI 72
Query: 99 ----GCCIDKDEK--ILIYEYMPNKSL-DFFLFDWVTRVRII---EGIAQGLLYLHQYSR 148
GCC D+ EK L+ EY+P SL D+ V +++ + I +G+ YLH
Sbjct: 73 VKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLFAQQICEGMAYLHA--- 129
Query: 149 VRIIHRDLKVSNILLDKDMNPKISDFGIAR-ICRGNELQANTGRIVGTYRYMSPEYAIQG 207
IHR L N+LLD D KI DFG+A+ + G+E + +PE +
Sbjct: 130 QHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEC 189
Query: 208 IFSIKSDVFSFGVLLLKIVSGKKTTGFYRTYSFTLLGYISENIYEFPSVDTHNVKTFGFL 267
F SDV+SFGV L ++++ + T L+G+
Sbjct: 190 KFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQGQ------------------ 231
Query: 268 HLTIFKLFSISSVG--LSNDIVCLCILRYVNIALLCVQESADDRPTMNDVVSML 319
+T+ +L + G L C C + ++ C + A RPT ++V +L
Sbjct: 232 -MTVLRLTELLERGERLPRPDRCPCEI--YHLMKNCWETEASFRPTFQNLVPIL 282
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 122/294 (41%), Gaps = 57/294 (19%)
Query: 56 LGEGGFG--------PVYKGVLKNGDEIAVKRLSGRSGQGLRELKNK----LRLL----- 98
LGEG FG P G G+ +AVK L G LR + LR L
Sbjct: 17 LGEGHFGKVSLYCYDPTNDG---TGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHI 73
Query: 99 ----GCCIDKDEK--ILIYEYMPNKSL-DFFLFDWVTRVRII---EGIAQGLLYLHQYSR 148
GCC D+ EK L+ EY+P SL D+ V +++ + I +G+ YLH
Sbjct: 74 VKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLFAQQICEGMAYLHA--- 130
Query: 149 VRIIHRDLKVSNILLDKDMNPKISDFGIAR-ICRGNELQANTGRIVGTYRYMSPEYAIQG 207
IHR L N+LLD D KI DFG+A+ + G+E + +PE +
Sbjct: 131 QHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEC 190
Query: 208 IFSIKSDVFSFGVLLLKIVSGKKTTGFYRTYSFTLLGYISENIYEFPSVDTHNVKTFGFL 267
F SDV+SFGV L ++++ + T L+G+
Sbjct: 191 KFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQGQ------------------ 232
Query: 268 HLTIFKLFSISSVG--LSNDIVCLCILRYVNIALLCVQESADDRPTMNDVVSML 319
+T+ +L + G L C C + ++ C + A RPT ++V +L
Sbjct: 233 -MTVLRLTELLERGERLPRPDRCPCEI--YHLMKNCWETEASFRPTFQNLVPIL 283
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 126/298 (42%), Gaps = 65/298 (21%)
Query: 56 LGEGGFG--------PVYKGVLKNGDEIAVKRLSGRSG----QGLRELKNKLRLL----- 98
LGEG FG P G G+ +AVK L G G ++ + LR L
Sbjct: 22 LGEGHFGKVSLYCYDPTNDG---TGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHI 78
Query: 99 ----GCCIDKDEK--ILIYEYMPNKSLDFFLFDWVTRVRI--------IEGIAQGLLYLH 144
GCC D+ EK L+ EY+P SL D++ R I + I +G+ YLH
Sbjct: 79 IKYKGCCEDQGEKSLQLVMEYVPLGSLR----DYLPRHSIGLAQLLLFAQQICEGMAYLH 134
Query: 145 QYSRVRIIHRDLKVSNILLDKDMNPKISDFGIAR-ICRGNELQANTGRIVGTYRYMSPEY 203
IHR+L N+LLD D KI DFG+A+ + G+E + +PE
Sbjct: 135 A---QHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPEC 191
Query: 204 AIQGIFSIKSDVFSFGVLLLKIVSGKKTTGFYRTYSFTLLGYISENIYEFPSVDTHNVKT 263
+ F SDV+SFGV L ++++ ++ T L+G I++
Sbjct: 192 LKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIG-IAQG-------------- 236
Query: 264 FGFLHLTIFKLFSISSVG--LSNDIVCLCILRYVNIALLCVQESADDRPTMNDVVSML 319
+T+ +L + G L C C + ++ C + A RPT +++ +L
Sbjct: 237 ----QMTVLRLTELLERGERLPRPDKCPCEV--YHLMKNCWETEASFRPTFENLIPIL 288
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 100/198 (50%), Gaps = 23/198 (11%)
Query: 50 FSDANKLGEGGFGPVYKGVLKNGDEI-AVKRLS-GRSGQGLRELKNKLRLLGCCID---- 103
F+ K+G+G FG V+KG+ ++ A+K + + + +++ ++ +L C
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83
Query: 104 -------KDEKI-LIYEYMPNKS-LDFF---LFDWVTRVRIIEGIAQGLLYLHQYSRVRI 151
KD K+ +I EY+ S LD D I+ I +GL YLH +
Sbjct: 84 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKK--- 140
Query: 152 IHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSI 211
IHRD+K +N+LL + K++DFG+A +++ N VGT +M+PE Q +
Sbjct: 141 IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNX--FVGTPFWMAPEVIKQSAYDS 198
Query: 212 KSDVFSFGVLLLKIVSGK 229
K+D++S G+ +++ G+
Sbjct: 199 KADIWSLGITAIELARGE 216
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 100/198 (50%), Gaps = 23/198 (11%)
Query: 50 FSDANKLGEGGFGPVYKGVLKNGDEI-AVKRLS-GRSGQGLRELKNKLRLLGCCID---- 103
F+ K+G+G FG V+KG+ ++ A+K + + + +++ ++ +L C
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 104 -------KDEKI-LIYEYMPNKS-LDFF---LFDWVTRVRIIEGIAQGLLYLHQYSRVRI 151
KD K+ +I EY+ S LD D I+ I +GL YLH +
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKK--- 125
Query: 152 IHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSI 211
IHRD+K +N+LL + K++DFG+A +++ N VGT +M+PE Q +
Sbjct: 126 IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNX--FVGTPFWMAPEVIKQSAYDS 183
Query: 212 KSDVFSFGVLLLKIVSGK 229
K+D++S G+ +++ G+
Sbjct: 184 KADIWSLGITAIELARGE 201
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 95/200 (47%), Gaps = 29/200 (14%)
Query: 54 NKLGEGGFGPV----YKGVLKN-GDEIAVKRLSGRSGQGLRELKNKLRLL---------- 98
+LG+G FG V Y + N G+ +AVK+L + + LR+ + ++ +L
Sbjct: 47 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 106
Query: 99 --GCCIDKDEK--ILIYEYMPNKSLDFFL------FDWVTRVRIIEGIAQGLLYLHQYSR 148
G C + LI EY+P SL +L D + ++ I +G+ YL
Sbjct: 107 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GT 163
Query: 149 VRIIHRDLKVSNILLDKDMNPKISDFGIARIC-RGNELQANTGRIVGTYRYMSPEYAIQG 207
R IHRDL NIL++ + KI DFG+ ++ + E + +PE +
Sbjct: 164 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 223
Query: 208 IFSIKSDVFSFGVLLLKIVS 227
FS+ SDV+SFGV+L ++ +
Sbjct: 224 KFSVASDVWSFGVVLYELFT 243
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 95/200 (47%), Gaps = 29/200 (14%)
Query: 54 NKLGEGGFGPV----YKGVLKN-GDEIAVKRLSGRSGQGLRELKNKLRLL---------- 98
+LG+G FG V Y + N G+ +AVK+L + + LR+ + ++ +L
Sbjct: 19 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 99 --GCCIDKDEK--ILIYEYMPNKSLDFFL------FDWVTRVRIIEGIAQGLLYLHQYSR 148
G C + LI EY+P SL +L D + ++ I +G+ YL
Sbjct: 79 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYL---GT 135
Query: 149 VRIIHRDLKVSNILLDKDMNPKISDFGIARIC-RGNELQANTGRIVGTYRYMSPEYAIQG 207
R IHRDL NIL++ + KI DFG+ ++ + E + +PE +
Sbjct: 136 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 195
Query: 208 IFSIKSDVFSFGVLLLKIVS 227
FS+ SDV+SFGV+L ++ +
Sbjct: 196 KFSVASDVWSFGVVLYELFT 215
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 95/200 (47%), Gaps = 29/200 (14%)
Query: 54 NKLGEGGFGPV----YKGVLKN-GDEIAVKRLSGRSGQGLRELKNKLRLL---------- 98
+LG+G FG V Y + N G+ +AVK+L + + LR+ + ++ +L
Sbjct: 14 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 73
Query: 99 --GCCIDKDEK--ILIYEYMPNKSLDFFL------FDWVTRVRIIEGIAQGLLYLHQYSR 148
G C + LI EY+P SL +L D + ++ I +G+ YL
Sbjct: 74 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GT 130
Query: 149 VRIIHRDLKVSNILLDKDMNPKISDFGIARIC-RGNELQANTGRIVGTYRYMSPEYAIQG 207
R IHRDL NIL++ + KI DFG+ ++ + E + +PE +
Sbjct: 131 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 190
Query: 208 IFSIKSDVFSFGVLLLKIVS 227
FS+ SDV+SFGV+L ++ +
Sbjct: 191 KFSVASDVWSFGVVLYELFT 210
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 95/200 (47%), Gaps = 29/200 (14%)
Query: 54 NKLGEGGFGPV----YKGVLKN-GDEIAVKRLSGRSGQGLRELKNKLRLL---------- 98
+LG+G FG V Y + N G+ +AVK+L + + LR+ + ++ +L
Sbjct: 15 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 74
Query: 99 --GCCIDKDEK--ILIYEYMPNKSLDFFL------FDWVTRVRIIEGIAQGLLYLHQYSR 148
G C + LI EY+P SL +L D + ++ I +G+ YL
Sbjct: 75 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GT 131
Query: 149 VRIIHRDLKVSNILLDKDMNPKISDFGIARIC-RGNELQANTGRIVGTYRYMSPEYAIQG 207
R IHRDL NIL++ + KI DFG+ ++ + E + +PE +
Sbjct: 132 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 191
Query: 208 IFSIKSDVFSFGVLLLKIVS 227
FS+ SDV+SFGV+L ++ +
Sbjct: 192 KFSVASDVWSFGVVLYELFT 211
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 107/225 (47%), Gaps = 40/225 (17%)
Query: 56 LGEGGFGPVYKGVLK-NGDEIAVKRLSGRSGQG------LRELK--------NKLRLLGC 100
LG+G FG V K + E AVK ++ S + LRE++ N ++L
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 101 CIDKDEKILIYEYMPNKSLDFFLFDWVTR---------VRIIEGIAQGLLYLHQYSRVRI 151
D ++ E L FD + + RII+ + G+ Y+H+++ I
Sbjct: 90 LEDSSSFYIVGELYTGGEL----FDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN---I 142
Query: 152 IHRDLKVSNILL---DKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGI 208
+HRDLK NILL +KD + KI DFG++ + N + +GT Y++PE ++G
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDR---IGTAYYIAPE-VLRGT 198
Query: 209 FSIKSDVFSFGVLLLKIVSGKKTTGFYRTYSFTLLGYISENIYEF 253
+ K DV+S GV+L ++SG T FY + +L + Y F
Sbjct: 199 YDEKCDVWSAGVILYILLSG--TPPFYGKNEYDILKRVETGKYAF 241
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 95/200 (47%), Gaps = 29/200 (14%)
Query: 54 NKLGEGGFGPV----YKGVLKN-GDEIAVKRLSGRSGQGLRELKNKLRLL---------- 98
+LG+G FG V Y + N G+ +AVK+L + + LR+ + ++ +L
Sbjct: 21 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 80
Query: 99 --GCCIDKDEK--ILIYEYMPNKSLDFFL------FDWVTRVRIIEGIAQGLLYLHQYSR 148
G C + LI EY+P SL +L D + ++ I +G+ YL
Sbjct: 81 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GT 137
Query: 149 VRIIHRDLKVSNILLDKDMNPKISDFGIARIC-RGNELQANTGRIVGTYRYMSPEYAIQG 207
R IHRDL NIL++ + KI DFG+ ++ + E + +PE +
Sbjct: 138 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 197
Query: 208 IFSIKSDVFSFGVLLLKIVS 227
FS+ SDV+SFGV+L ++ +
Sbjct: 198 KFSVASDVWSFGVVLYELFT 217
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 95/200 (47%), Gaps = 29/200 (14%)
Query: 54 NKLGEGGFGPV----YKGVLKN-GDEIAVKRLSGRSGQGLRELKNKLRLL---------- 98
+LG+G FG V Y + N G+ +AVK+L + + LR+ + ++ +L
Sbjct: 22 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 81
Query: 99 --GCCIDKDEK--ILIYEYMPNKSLDFFL------FDWVTRVRIIEGIAQGLLYLHQYSR 148
G C + LI EY+P SL +L D + ++ I +G+ YL
Sbjct: 82 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GT 138
Query: 149 VRIIHRDLKVSNILLDKDMNPKISDFGIARIC-RGNELQANTGRIVGTYRYMSPEYAIQG 207
R IHRDL NIL++ + KI DFG+ ++ + E + +PE +
Sbjct: 139 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 198
Query: 208 IFSIKSDVFSFGVLLLKIVS 227
FS+ SDV+SFGV+L ++ +
Sbjct: 199 KFSVASDVWSFGVVLYELFT 218
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 95/200 (47%), Gaps = 29/200 (14%)
Query: 54 NKLGEGGFGPV----YKGVLKN-GDEIAVKRLSGRSGQGLRELKNKLRLL---------- 98
+LG+G FG V Y + N G+ +AVK+L + + LR+ + ++ +L
Sbjct: 20 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 79
Query: 99 --GCCIDKDEK--ILIYEYMPNKSLDFFL------FDWVTRVRIIEGIAQGLLYLHQYSR 148
G C + LI EY+P SL +L D + ++ I +G+ YL
Sbjct: 80 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GT 136
Query: 149 VRIIHRDLKVSNILLDKDMNPKISDFGIARIC-RGNELQANTGRIVGTYRYMSPEYAIQG 207
R IHRDL NIL++ + KI DFG+ ++ + E + +PE +
Sbjct: 137 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 196
Query: 208 IFSIKSDVFSFGVLLLKIVS 227
FS+ SDV+SFGV+L ++ +
Sbjct: 197 KFSVASDVWSFGVVLYELFT 216
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 95/200 (47%), Gaps = 29/200 (14%)
Query: 54 NKLGEGGFGPV----YKGVLKN-GDEIAVKRLSGRSGQGLRELKNKLRLL---------- 98
+LG+G FG V Y + N G+ +AVK+L + + LR+ + ++ +L
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 99 --GCCIDKDEK--ILIYEYMPNKSLDFFL------FDWVTRVRIIEGIAQGLLYLHQYSR 148
G C + LI EY+P SL +L D + ++ I +G+ YL
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GT 132
Query: 149 VRIIHRDLKVSNILLDKDMNPKISDFGIARIC-RGNELQANTGRIVGTYRYMSPEYAIQG 207
R IHRDL NIL++ + KI DFG+ ++ + E + +PE +
Sbjct: 133 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 192
Query: 208 IFSIKSDVFSFGVLLLKIVS 227
FS+ SDV+SFGV+L ++ +
Sbjct: 193 KFSVASDVWSFGVVLYELFT 212
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 104/212 (49%), Gaps = 44/212 (20%)
Query: 48 NKFSDANKLGEGGFGPVYKGV-LKNGDEI----AVKRL-SGRSGQGLRELKNK------- 94
+F LG G FG VYKG+ + G+++ A+K L S + +E+ ++
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 78
Query: 95 -----LRLLGCCIDKDEKILIYEYMPNKSL-DF-----------FLFDWVTRVRIIEGIA 137
RLLG C+ + LI + MP L D+ +L +W + IA
Sbjct: 79 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 131
Query: 138 QGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARI--CRGNELQANTGRIVGT 195
+G+ YL R++HRDL N+L+ + KI+DFG A++ E A G++
Sbjct: 132 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV--P 186
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVS 227
++M+ E + I++ +SDV+S+GV + ++++
Sbjct: 187 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 95/200 (47%), Gaps = 29/200 (14%)
Query: 54 NKLGEGGFGPV----YKGVLKN-GDEIAVKRLSGRSGQGLRELKNKLRLL---------- 98
+LG+G FG V Y + N G+ +AVK+L + + LR+ + ++ +L
Sbjct: 23 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 82
Query: 99 --GCCIDKDEK--ILIYEYMPNKSLDFFL------FDWVTRVRIIEGIAQGLLYLHQYSR 148
G C + LI EY+P SL +L D + ++ I +G+ YL
Sbjct: 83 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GT 139
Query: 149 VRIIHRDLKVSNILLDKDMNPKISDFGIARIC-RGNELQANTGRIVGTYRYMSPEYAIQG 207
R IHRDL NIL++ + KI DFG+ ++ + E + +PE +
Sbjct: 140 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 199
Query: 208 IFSIKSDVFSFGVLLLKIVS 227
FS+ SDV+SFGV+L ++ +
Sbjct: 200 KFSVASDVWSFGVVLYELFT 219
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 103/223 (46%), Gaps = 58/223 (26%)
Query: 49 KFSDANKLGEGGFGPVYKGVLKNGD---EIAVKRLSGRSGQG--------------LREL 91
KF D +GEG FG V K +K + A+KR+ + + L
Sbjct: 25 KFQDV--IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHH 82
Query: 92 KNKLRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTRVRIIE----------------- 134
N + LLG C + L EY P+ +L D++ + R++E
Sbjct: 83 PNIINLLGACEHRGYLYLAIEYAPHGNL----LDFLRKSRVLETDPAFAIANSTASTLSS 138
Query: 135 --------GIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNE-- 184
+A+G+ YL S+ + IHR+L NIL+ ++ KI+DFG++ RG E
Sbjct: 139 QQLLHFAADVARGMDYL---SQKQFIHRNLAARNILVGENYVAKIADFGLS---RGQEVY 192
Query: 185 LQANTGRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVS 227
++ GR+ R+M+ E +++ SDV+S+GVLL +IVS
Sbjct: 193 VKKTMGRL--PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 104/212 (49%), Gaps = 44/212 (20%)
Query: 48 NKFSDANKLGEGGFGPVYKGV-LKNGDEI----AVKRL-SGRSGQGLRELKNK------- 94
+F LG G FG VYKG+ + G+++ A+K L S + +E+ ++
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 95 -----LRLLGCCIDKDEKILIYEYMPNKSL-DF-----------FLFDWVTRVRIIEGIA 137
RLLG C+ + LI + MP L D+ +L +W + IA
Sbjct: 77 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 129
Query: 138 QGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARI--CRGNELQANTGRIVGT 195
+G+ YL R++HRDL N+L+ + KI+DFG A++ E A G++
Sbjct: 130 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV--P 184
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVS 227
++M+ E + I++ +SDV+S+GV + ++++
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 95/200 (47%), Gaps = 29/200 (14%)
Query: 54 NKLGEGGFGPV----YKGVLKN-GDEIAVKRLSGRSGQGLRELKNKLRLL---------- 98
+LG+G FG V Y + N G+ +AVK+L + + LR+ + ++ +L
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 99 --GCCIDKDEK--ILIYEYMPNKSLDFFL------FDWVTRVRIIEGIAQGLLYLHQYSR 148
G C + LI EY+P SL +L D + ++ I +G+ YL
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GT 132
Query: 149 VRIIHRDLKVSNILLDKDMNPKISDFGIARIC-RGNELQANTGRIVGTYRYMSPEYAIQG 207
R IHRDL NIL++ + KI DFG+ ++ + E + +PE +
Sbjct: 133 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 192
Query: 208 IFSIKSDVFSFGVLLLKIVS 227
FS+ SDV+SFGV+L ++ +
Sbjct: 193 KFSVASDVWSFGVVLYELFT 212
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 95/200 (47%), Gaps = 29/200 (14%)
Query: 54 NKLGEGGFGPV----YKGVLKN-GDEIAVKRLSGRSGQGLRELKNKLRLL---------- 98
+LG+G FG V Y + N G+ +AVK+L + + LR+ + ++ +L
Sbjct: 19 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 99 --GCCIDKDEK--ILIYEYMPNKSLDFFL------FDWVTRVRIIEGIAQGLLYLHQYSR 148
G C + LI EY+P SL +L D + ++ I +G+ YL
Sbjct: 79 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GT 135
Query: 149 VRIIHRDLKVSNILLDKDMNPKISDFGIARIC-RGNELQANTGRIVGTYRYMSPEYAIQG 207
R IHRDL NIL++ + KI DFG+ ++ + E + +PE +
Sbjct: 136 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 195
Query: 208 IFSIKSDVFSFGVLLLKIVS 227
FS+ SDV+SFGV+L ++ +
Sbjct: 196 KFSVASDVWSFGVVLYELFT 215
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 135/311 (43%), Gaps = 72/311 (23%)
Query: 44 STATNKFSDANKLGEGGFGPVYKG-VLKNGDEIAVKRLSGRSGQGLREL----------- 91
+ A N+ ++G+GGFG V+KG ++K+ +A+K L +G E+
Sbjct: 15 TLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREV 74
Query: 92 --------KNKLRLLGCCIDKDEKILIYEYMPNKSLDFFLFD------WVTRVRIIEGIA 137
N ++L G + ++ E++P L L D W ++R++ IA
Sbjct: 75 FIMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIA 132
Query: 138 QGLLYLHQYSRVRIIHRDLKVSNILLDK-DMN----PKISDFGIARICRGNELQANTGRI 192
G+ Y+ Q I+HRDL+ NI L D N K++DF +++ + + +G +
Sbjct: 133 LGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ----QSVHSVSG-L 186
Query: 193 VGTYRYMSPEY--AIQGIFSIKSDVFSFGVLLLKIVSGKKTTGFYRTYSFTLLGYISENI 250
+G +++M+PE A + ++ K+D +SF ++L I++G+ G + YS+ + +I+
Sbjct: 187 LGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGE---GPFDEYSYGKIKFIN--- 240
Query: 251 YEFPSVDTHNVKTFGFLHLTIFKLFSISSVGLSNDIVCLCILRYVNIALLCVQESADDRP 310
I GL I C R N+ LC RP
Sbjct: 241 -------------------------MIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRP 275
Query: 311 TMNDVVSMLTN 321
+ +V L+
Sbjct: 276 HFSYIVKELSE 286
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 100/221 (45%), Gaps = 45/221 (20%)
Query: 45 TATNKFSDANKLGE----GGFGPVYKGV-LKNGDEIAVKRLSGRSGQGL-------RELK 92
T + SD +LGE GG V+ L++ ++AVK L + RE +
Sbjct: 5 TTPSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQ 64
Query: 93 NKLRLLGCCIDKDEKILIYEY----MPNKSLDFFLFDWV---------------TRVRII 133
N L I + +Y+ P L + + ++V T R I
Sbjct: 65 NAAALNHPAI-----VAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAI 119
Query: 134 EGIA---QGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARIC--RGNELQAN 188
E IA Q L + HQ IIHRD+K +NIL+ K+ DFGIAR GN +
Sbjct: 120 EVIADACQALNFSHQNG---IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVX-Q 175
Query: 189 TGRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGK 229
T ++GT +Y+SPE A +SDV+S G +L ++++G+
Sbjct: 176 TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 95/200 (47%), Gaps = 29/200 (14%)
Query: 54 NKLGEGGFGPV----YKGVLKN-GDEIAVKRLSGRSGQGLRELKNKLRLL---------- 98
+LG+G FG V Y + N G+ +AVK+L + + LR+ + ++ +L
Sbjct: 34 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 93
Query: 99 --GCCIDKDEK--ILIYEYMPNKSLDFFL------FDWVTRVRIIEGIAQGLLYLHQYSR 148
G C + LI EY+P SL +L D + ++ I +G+ YL
Sbjct: 94 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GT 150
Query: 149 VRIIHRDLKVSNILLDKDMNPKISDFGIARIC-RGNELQANTGRIVGTYRYMSPEYAIQG 207
R IHRDL NIL++ + KI DFG+ ++ + E + +PE +
Sbjct: 151 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 210
Query: 208 IFSIKSDVFSFGVLLLKIVS 227
FS+ SDV+SFGV+L ++ +
Sbjct: 211 KFSVASDVWSFGVVLYELFT 230
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 104/212 (49%), Gaps = 44/212 (20%)
Query: 48 NKFSDANKLGEGGFGPVYKGV-LKNGDEI----AVKRL-SGRSGQGLRELKNK------- 94
+F LG G FG VYKG+ + G+++ A+K L S + +E+ ++
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 95 -----LRLLGCCIDKDEKILIYEYMPNKSL-DF-----------FLFDWVTRVRIIEGIA 137
RLLG C+ + LI + MP L D+ +L +W + IA
Sbjct: 77 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 129
Query: 138 QGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARI--CRGNELQANTGRIVGT 195
+G+ YL R++HRDL N+L+ + KI+DFG A++ E A G++
Sbjct: 130 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV--P 184
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVS 227
++M+ E + I++ +SDV+S+GV + ++++
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 104/212 (49%), Gaps = 44/212 (20%)
Query: 48 NKFSDANKLGEGGFGPVYKGV-LKNGDEI----AVKRL-SGRSGQGLRELKNK------- 94
+F LG G FG VYKG+ + G+++ A+K L S + +E+ ++
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 95 -----LRLLGCCIDKDEKILIYEYMPNKSL-DF-----------FLFDWVTRVRIIEGIA 137
RLLG C+ + LI + MP L D+ +L +W + IA
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 127
Query: 138 QGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARI--CRGNELQANTGRIVGT 195
+G+ YL R++HRDL N+L+ + KI+DFG A++ E A G++
Sbjct: 128 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV--P 182
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVS 227
++M+ E + I++ +SDV+S+GV + ++++
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 95/200 (47%), Gaps = 29/200 (14%)
Query: 54 NKLGEGGFGPV----YKGVLKN-GDEIAVKRLSGRSGQGLRELKNKLRLL---------- 98
+LG+G FG V Y + N G+ +AVK+L + + LR+ + ++ +L
Sbjct: 34 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 93
Query: 99 --GCCIDKDEK--ILIYEYMPNKSLDFFL------FDWVTRVRIIEGIAQGLLYLHQYSR 148
G C + LI EY+P SL +L D + ++ I +G+ YL
Sbjct: 94 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GT 150
Query: 149 VRIIHRDLKVSNILLDKDMNPKISDFGIARIC-RGNELQANTGRIVGTYRYMSPEYAIQG 207
R IHRDL NIL++ + KI DFG+ ++ + E + +PE +
Sbjct: 151 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 210
Query: 208 IFSIKSDVFSFGVLLLKIVS 227
FS+ SDV+SFGV+L ++ +
Sbjct: 211 KFSVASDVWSFGVVLYELFT 230
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 104/212 (49%), Gaps = 44/212 (20%)
Query: 48 NKFSDANKLGEGGFGPVYKGV-LKNGDEI----AVKRL-SGRSGQGLRELKNK------- 94
+F LG G FG VYKG+ + G+++ A+K L S + +E+ ++
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 95 -----LRLLGCCIDKDEKILIYEYMPNKSL-DF-----------FLFDWVTRVRIIEGIA 137
RLLG C+ + LI + MP L D+ +L +W + IA
Sbjct: 82 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 134
Query: 138 QGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARI--CRGNELQANTGRIVGT 195
+G+ YL R++HRDL N+L+ + KI+DFG A++ E A G++
Sbjct: 135 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV--P 189
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVS 227
++M+ E + I++ +SDV+S+GV + ++++
Sbjct: 190 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 101/221 (45%), Gaps = 38/221 (17%)
Query: 56 LGEGGFGPVYKGVLKNGDEIAVKRLSGRSGQG-----LRELK--------NKLRLLGCCI 102
LG+G FG K + E+ V + R + L+E+K N L+ +G +
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGV-L 76
Query: 103 DKDEKI-LIYEYMPNKSLDFFL------FDWVTRVRIIEGIAQGLLYLHQYSRVRIIHRD 155
KD+++ I EY+ +L + + W RV + IA G+ YLH + IIHRD
Sbjct: 77 YKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHS---MNIIHRD 133
Query: 156 LKVSNILLDKDMNPKISDFGIARICRGNELQANTGR------------IVGTYRYMSPEY 203
L N L+ ++ N ++DFG+AR+ + Q R +VG +M+PE
Sbjct: 134 LNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEM 193
Query: 204 AIQGIFSIKSDVFSFGVLLLKIVSGKKTTGFY--RTYSFTL 242
+ K DVFSFG++L +I+ Y RT F L
Sbjct: 194 INGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGL 234
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 95/198 (47%), Gaps = 29/198 (14%)
Query: 56 LGEGGFGPVYKGVLKNGDE----IAVKRL-SGRSGQGLREL------------KNKLRLL 98
+G G FG V G LK + +A+K L SG + + R+ N + L
Sbjct: 15 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLE 74
Query: 99 GCCIDKDEKILIYEYMPNKSLDFFL------FDWVTRVRIIEGIAQGLLYLHQYSRVRII 152
G ++I E+M N SLD FL F + V ++ GIA G+ YL + + +
Sbjct: 75 GVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYL---ADMNYV 131
Query: 153 HRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVG---TYRYMSPEYAIQGIF 209
HR L NIL++ ++ K+SDFG++R + +G R+ +PE F
Sbjct: 132 HRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKF 191
Query: 210 SIKSDVFSFGVLLLKIVS 227
+ SDV+S+G+++ +++S
Sbjct: 192 TSASDVWSYGIVMWEVMS 209
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 104/212 (49%), Gaps = 44/212 (20%)
Query: 48 NKFSDANKLGEGGFGPVYKGV-LKNGDEI----AVKRL-SGRSGQGLRELKNK------- 94
+F LG G FG VYKG+ + G+++ A+ L S + +E+ ++
Sbjct: 49 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASV 108
Query: 95 -----LRLLGCCIDKDEKILIYEYMPNKSL-DF-----------FLFDWVTRVRIIEGIA 137
RLLG C+ + LI + MP L D+ +L +W + IA
Sbjct: 109 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 161
Query: 138 QGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARI--CRGNELQANTGRIVGT 195
+G+ YL R++HRDL N+L+ + KI+DFG+A++ E A G++
Sbjct: 162 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--P 216
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVS 227
++M+ E + I++ +SDV+S+GV + ++++
Sbjct: 217 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 248
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 102/215 (47%), Gaps = 37/215 (17%)
Query: 43 VSTATNKFSDANK----LGEGGFGPVYKGVLK-NGDEIAVKRLSGRSGQGLRELKNKLRL 97
V +T FSD K LG+G FG V K G E AVK +S R + + ++ LR
Sbjct: 17 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLRE 76
Query: 98 LGCC--IDKDEKILIYEYMPNKSLDFFL-------------------FDWVTRVRIIEGI 136
+ +D +YE+ +K F+L F V RII +
Sbjct: 77 VQLLKQLDHPNIXKLYEFFEDKGY-FYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQV 135
Query: 137 AQGLLYLHQYSRVRIIHRDLKVSNILLD---KDMNPKISDFGIARICRGNELQANTGRIV 193
G+ Y H + +I+HRDLK N+LL+ KD N +I DFG++ ++ + +
Sbjct: 136 LSGITYXH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDK---I 189
Query: 194 GTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
GT Y++PE + G + K DV+S GV+L ++SG
Sbjct: 190 GTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 104/212 (49%), Gaps = 44/212 (20%)
Query: 48 NKFSDANKLGEGGFGPVYKGV-LKNGDEI----AVKRL-SGRSGQGLRELKNK------- 94
+F LG G FG VYKG+ + G+++ A+K L S + +E+ ++
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 95 -----LRLLGCCIDKDEKILIYEYMPNKSL-DF-----------FLFDWVTRVRIIEGIA 137
RLLG C+ + LI + MP L D+ +L +W + IA
Sbjct: 77 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 129
Query: 138 QGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARI--CRGNELQANTGRIVGT 195
+G+ YL R++HRDL N+L+ + KI+DFG A++ E A G++
Sbjct: 130 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV--P 184
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVS 227
++M+ E + I++ +SDV+S+GV + ++++
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 111/232 (47%), Gaps = 32/232 (13%)
Query: 45 TATNKFSDANKLGEGGFGPVYKGVLK-NGDEIAVKRLSGRSGQG------LRELK----- 92
T +++ LG+G FG V K + E AVK ++ S + LRE++
Sbjct: 19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL 78
Query: 93 ---NKLRLLGCCIDKDEKILIYE-YMPNKSLDFFL----FDWVTRVRIIEGIAQGLLYLH 144
N ++L D ++ E Y + D + F RII+ + G+ Y+H
Sbjct: 79 DHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMH 138
Query: 145 QYSRVRIIHRDLKVSNILL---DKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSP 201
+++ I+HRDLK NILL +KD + KI DFG++ + N + +GT Y++P
Sbjct: 139 KHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDR---IGTAYYIAP 192
Query: 202 EYAIQGIFSIKSDVFSFGVLLLKIVSGKKTTGFYRTYSFTLLGYISENIYEF 253
E ++G + K DV+S GV+L ++SG T FY + +L + Y F
Sbjct: 193 E-VLRGTYDEKCDVWSAGVILYILLSG--TPPFYGKNEYDILKRVETGKYAF 241
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 104/212 (49%), Gaps = 44/212 (20%)
Query: 48 NKFSDANKLGEGGFGPVYKGV-LKNGDEI----AVKRL-SGRSGQGLRELKNK------- 94
+F L G FG VYKG+ + G+++ A+K L S + +E+ ++
Sbjct: 15 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 95 -----LRLLGCCIDKDEKILIYEYMPNKSL-DF-----------FLFDWVTRVRIIEGIA 137
RLLG C+ + LI + MP L D+ +L +W + IA
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 127
Query: 138 QGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARI--CRGNELQANTGRIVGT 195
+G+ YL R++HRDL N+L+ + KI+DFG+A++ E A G++
Sbjct: 128 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--P 182
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVS 227
++M+ E + I++ +SDV+S+GV + ++++
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 110/226 (48%), Gaps = 42/226 (18%)
Query: 56 LGEGGFGPVYKGVLK-NGDEIAVKRLSGRSGQG------LRELKNKLRLLGCCIDKDEKI 108
LG+G FG V K + E AVK ++ S + LRE++ +L D +
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL-----DHPNIM 84
Query: 109 LIYEYMPNKSLDFF---------LFDWVTR---------VRIIEGIAQGLLYLHQYSRVR 150
++E + + S + LFD + + RII+ + G+ Y+H+++
Sbjct: 85 KLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN--- 141
Query: 151 IIHRDLKVSNILL---DKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQG 207
I+HRDLK NILL +KD + KI DFG++ + N + +GT Y++PE ++G
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDR---IGTAYYIAPE-VLRG 197
Query: 208 IFSIKSDVFSFGVLLLKIVSGKKTTGFYRTYSFTLLGYISENIYEF 253
+ K DV+S GV+L ++SG T FY + +L + Y F
Sbjct: 198 TYDEKCDVWSAGVILYILLSG--TPPFYGKNEYDILKRVETGKYAF 241
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 95/200 (47%), Gaps = 29/200 (14%)
Query: 54 NKLGEGGFGPV----YKGVLKN-GDEIAVKRLSGRSGQGLRELKNKLRLL---------- 98
+LG+G FG V Y + N G+ +AVK+L + + LR+ + ++ +L
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 99 --GCCIDKDEK--ILIYEYMPNKSLDFFL------FDWVTRVRIIEGIAQGLLYLHQYSR 148
G C + LI EY+P SL +L D + ++ I +G+ YL
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GT 132
Query: 149 VRIIHRDLKVSNILLDKDMNPKISDFGIARIC-RGNELQANTGRIVGTYRYMSPEYAIQG 207
R IHRDL NIL++ + KI DFG+ ++ + E + +PE +
Sbjct: 133 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTES 192
Query: 208 IFSIKSDVFSFGVLLLKIVS 227
FS+ SDV+SFGV+L ++ +
Sbjct: 193 KFSVASDVWSFGVVLYELFT 212
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 108/216 (50%), Gaps = 40/216 (18%)
Query: 46 ATNKFSDANKLGEGGFGPVYKGV-LKNGDE-IAVKRLSGRSGQG------------LREL 91
A ++ ++GEG +G V+K LKNG +A+KR+ ++G+ LR L
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 92 K-----NKLRLLGCCI----DKDEKI-LIYEYMPNKSLDFFLFDWV--------TRVRII 133
+ N +RL C D++ K+ L++E++ ++ L +L D V T ++
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYL-DKVPEPGVPTETIKDMM 126
Query: 134 EGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIV 193
+ +GL +LH + R++HRDLK NIL+ K++DFG+ARI Q +V
Sbjct: 127 FQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARI---YSFQMALTSVV 180
Query: 194 GTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGK 229
T Y +PE +Q ++ D++S G + ++ K
Sbjct: 181 VTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 104/212 (49%), Gaps = 44/212 (20%)
Query: 48 NKFSDANKLGEGGFGPVYKGV-LKNGDEI----AVKRL-SGRSGQGLRELKNK------- 94
+F L G FG VYKG+ + G+++ A+K L S + +E+ ++
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 95 -----LRLLGCCIDKDEKILIYEYMPNKSL-DF-----------FLFDWVTRVRIIEGIA 137
RLLG C+ + LI + MP L D+ +L +W + IA
Sbjct: 82 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 134
Query: 138 QGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARI--CRGNELQANTGRIVGT 195
+G+ YL R++HRDL N+L+ + KI+DFG+A++ E A G++
Sbjct: 135 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--P 189
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVS 227
++M+ E + I++ +SDV+S+GV + ++++
Sbjct: 190 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 100/221 (45%), Gaps = 45/221 (20%)
Query: 45 TATNKFSDANKLGE----GGFGPVYKGV-LKNGDEIAVKRLSGRSGQGL-------RELK 92
T + SD +LGE GG V+ L++ ++AVK L + RE +
Sbjct: 5 TTPSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQ 64
Query: 93 NKLRLLGCCIDKDEKILIYEY----MPNKSLDFFLFDWV---------------TRVRII 133
N L I + +Y+ P L + + ++V T R I
Sbjct: 65 NAAALNHPAI-----VAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAI 119
Query: 134 EGIA---QGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARIC--RGNELQAN 188
E IA Q L + HQ IIHRD+K +NI++ K+ DFGIAR GN +
Sbjct: 120 EVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSV-TQ 175
Query: 189 TGRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGK 229
T ++GT +Y+SPE A +SDV+S G +L ++++G+
Sbjct: 176 TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 104/212 (49%), Gaps = 44/212 (20%)
Query: 48 NKFSDANKLGEGGFGPVYKGV-LKNGDEI----AVKRL-SGRSGQGLRELKNK------- 94
+F L G FG VYKG+ + G+++ A+K L S + +E+ ++
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 95 -----LRLLGCCIDKDEKILIYEYMPNKSL-DF-----------FLFDWVTRVRIIEGIA 137
RLLG C+ + LI + MP L D+ +L +W + IA
Sbjct: 82 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 134
Query: 138 QGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARI--CRGNELQANTGRIVGT 195
+G+ YL R++HRDL N+L+ + KI+DFG+A++ E A G++
Sbjct: 135 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--P 189
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVS 227
++M+ E + I++ +SDV+S+GV + ++++
Sbjct: 190 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 100/221 (45%), Gaps = 45/221 (20%)
Query: 45 TATNKFSDANKLGE----GGFGPVYKGV-LKNGDEIAVKRLSGRSGQGL-------RELK 92
T + SD +LGE GG V+ L++ ++AVK L + RE +
Sbjct: 5 TTPSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQ 64
Query: 93 NKLRLLGCCIDKDEKILIYEY----MPNKSLDFFLFDWV---------------TRVRII 133
N L I + +Y+ P L + + ++V T R I
Sbjct: 65 NAAALNHPAI-----VAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAI 119
Query: 134 EGIA---QGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARIC--RGNELQAN 188
E IA Q L + HQ IIHRD+K +NI++ K+ DFGIAR GN +
Sbjct: 120 EVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSV-TQ 175
Query: 189 TGRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGK 229
T ++GT +Y+SPE A +SDV+S G +L ++++G+
Sbjct: 176 TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 95/199 (47%), Gaps = 31/199 (15%)
Query: 56 LGEGGFGPVYKGVLKNGD----EIAVKRLS-----GRSGQGLRE--------LKNKLRLL 98
+G G FG VY G L + D AVK L+ G Q L E N L LL
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 99 GCCIDKD-EKILIYEYMPNKSLDFFLFDWVTRVRIIE------GIAQGLLYLHQYSRVRI 151
G C+ + +++ YM + L F+ + + + +A+G+ YL + +
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---ASKKF 154
Query: 152 IHRDLKVSNILLDKDMNPKISDFGIARICRGNE---LQANTGRIVGTYRYMSPEYAIQGI 208
+HRDL N +LD+ K++DFG+AR E + TG + ++M+ E
Sbjct: 155 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV-KWMALESLQTQK 213
Query: 209 FSIKSDVFSFGVLLLKIVS 227
F+ KSDV+SFGVLL ++++
Sbjct: 214 FTTKSDVWSFGVLLWELMT 232
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 95/199 (47%), Gaps = 31/199 (15%)
Query: 56 LGEGGFGPVYKGVLKNGD----EIAVKRLS-----GRSGQGLRE--------LKNKLRLL 98
+G G FG VY G L + D AVK L+ G Q L E N L LL
Sbjct: 57 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 116
Query: 99 GCCIDKD-EKILIYEYMPNKSLDFFLFDWVTRVRIIE------GIAQGLLYLHQYSRVRI 151
G C+ + +++ YM + L F+ + + + +A+G+ YL + +
Sbjct: 117 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---ASKKF 173
Query: 152 IHRDLKVSNILLDKDMNPKISDFGIARICRGNE---LQANTGRIVGTYRYMSPEYAIQGI 208
+HRDL N +LD+ K++DFG+AR E + TG + ++M+ E
Sbjct: 174 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV-KWMALESLQTQK 232
Query: 209 FSIKSDVFSFGVLLLKIVS 227
F+ KSDV+SFGVLL ++++
Sbjct: 233 FTTKSDVWSFGVLLWELMT 251
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 95/199 (47%), Gaps = 31/199 (15%)
Query: 56 LGEGGFGPVYKGVLKNGD----EIAVKRLS-----GRSGQGLRE--------LKNKLRLL 98
+G G FG VY G L + D AVK L+ G Q L E N L LL
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 99 GCCIDKD-EKILIYEYMPNKSLDFFLFDWVTRVRIIE------GIAQGLLYLHQYSRVRI 151
G C+ + +++ YM + L F+ + + + +A+G+ YL + +
Sbjct: 97 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---ASKKF 153
Query: 152 IHRDLKVSNILLDKDMNPKISDFGIARICRGNE---LQANTGRIVGTYRYMSPEYAIQGI 208
+HRDL N +LD+ K++DFG+AR E + TG + ++M+ E
Sbjct: 154 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPV-KWMALESLQTQK 212
Query: 209 FSIKSDVFSFGVLLLKIVS 227
F+ KSDV+SFGVLL ++++
Sbjct: 213 FTTKSDVWSFGVLLWELMT 231
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 108/216 (50%), Gaps = 40/216 (18%)
Query: 46 ATNKFSDANKLGEGGFGPVYKGV-LKNGDE-IAVKRLSGRSGQG------------LREL 91
A ++ ++GEG +G V+K LKNG +A+KR+ ++G+ LR L
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 92 K-----NKLRLLGCCI----DKDEKI-LIYEYMPNKSLDFFLFDWV--------TRVRII 133
+ N +RL C D++ K+ L++E++ ++ L +L D V T ++
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYL-DKVPEPGVPTETIKDMM 126
Query: 134 EGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIV 193
+ +GL +LH + R++HRDLK NIL+ K++DFG+ARI Q +V
Sbjct: 127 FQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARI---YSFQMALTSVV 180
Query: 194 GTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGK 229
T Y +PE +Q ++ D++S G + ++ K
Sbjct: 181 VTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 95/199 (47%), Gaps = 31/199 (15%)
Query: 56 LGEGGFGPVYKGVLKNGD----EIAVKRLS-----GRSGQGLRE--------LKNKLRLL 98
+G G FG VY G L + D AVK L+ G Q L E N L LL
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 99 GCCIDKD-EKILIYEYMPNKSLDFFLFDWVTRVRIIE------GIAQGLLYLHQYSRVRI 151
G C+ + +++ YM + L F+ + + + +A+G+ YL + +
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---ASKKF 154
Query: 152 IHRDLKVSNILLDKDMNPKISDFGIARICRGNE---LQANTGRIVGTYRYMSPEYAIQGI 208
+HRDL N +LD+ K++DFG+AR E + TG + ++M+ E
Sbjct: 155 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV-KWMALESLQTQK 213
Query: 209 FSIKSDVFSFGVLLLKIVS 227
F+ KSDV+SFGVLL ++++
Sbjct: 214 FTTKSDVWSFGVLLWELMT 232
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 95/199 (47%), Gaps = 31/199 (15%)
Query: 56 LGEGGFGPVYKGVLKNGD----EIAVKRLS-----GRSGQGLRE--------LKNKLRLL 98
+G G FG VY G L + D AVK L+ G Q L E N L LL
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 99 GCCIDKD-EKILIYEYMPNKSLDFFLFDWVTRVRIIE------GIAQGLLYLHQYSRVRI 151
G C+ + +++ YM + L F+ + + + +A+G+ YL + +
Sbjct: 97 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---ASKKF 153
Query: 152 IHRDLKVSNILLDKDMNPKISDFGIARICRGNE---LQANTGRIVGTYRYMSPEYAIQGI 208
+HRDL N +LD+ K++DFG+AR E + TG + ++M+ E
Sbjct: 154 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV-KWMALESLQTQK 212
Query: 209 FSIKSDVFSFGVLLLKIVS 227
F+ KSDV+SFGVLL ++++
Sbjct: 213 FTTKSDVWSFGVLLWELMT 231
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 95/199 (47%), Gaps = 31/199 (15%)
Query: 56 LGEGGFGPVYKGVLKNGD----EIAVKRLS-----GRSGQGLRE--------LKNKLRLL 98
+G G FG VY G L + D AVK L+ G Q L E N L LL
Sbjct: 33 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 92
Query: 99 GCCIDKD-EKILIYEYMPNKSLDFFLFDWVTRVRIIE------GIAQGLLYLHQYSRVRI 151
G C+ + +++ YM + L F+ + + + +A+G+ YL + +
Sbjct: 93 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---ASKKF 149
Query: 152 IHRDLKVSNILLDKDMNPKISDFGIARICRGNE---LQANTGRIVGTYRYMSPEYAIQGI 208
+HRDL N +LD+ K++DFG+AR E + TG + ++M+ E
Sbjct: 150 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV-KWMALESLQTQK 208
Query: 209 FSIKSDVFSFGVLLLKIVS 227
F+ KSDV+SFGVLL ++++
Sbjct: 209 FTTKSDVWSFGVLLWELMT 227
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 108/216 (50%), Gaps = 40/216 (18%)
Query: 46 ATNKFSDANKLGEGGFGPVYKGV-LKNGDE-IAVKRLSGRSGQG------------LREL 91
A ++ ++GEG +G V+K LKNG +A+KR+ ++G+ LR L
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 92 K-----NKLRLLGCCI----DKDEKI-LIYEYMPNKSLDFFLFDWV--------TRVRII 133
+ N +RL C D++ K+ L++E++ ++ L +L D V T ++
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYL-DKVPEPGVPTETIKDMM 126
Query: 134 EGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIV 193
+ +GL +LH + R++HRDLK NIL+ K++DFG+ARI Q +V
Sbjct: 127 FQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARI---YSFQMALTSVV 180
Query: 194 GTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGK 229
T Y +PE +Q ++ D++S G + ++ K
Sbjct: 181 VTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 95/199 (47%), Gaps = 29/199 (14%)
Query: 55 KLGEGGFGPV----YKGVLKN-GDEIAVKRLSGRSGQGLRELKNKLRLL----------- 98
+LG+G FG V Y + N G+ +AVK+L + + LR+ + ++ +L
Sbjct: 20 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 99 -GCCIDKDEK--ILIYEYMPNKSLDFFL------FDWVTRVRIIEGIAQGLLYLHQYSRV 149
G C + LI E++P SL +L D + ++ I +G+ YL
Sbjct: 80 KGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYL---GTK 136
Query: 150 RIIHRDLKVSNILLDKDMNPKISDFGIARIC-RGNELQANTGRIVGTYRYMSPEYAIQGI 208
R IHRDL NIL++ + KI DFG+ ++ + E + +PE +
Sbjct: 137 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 196
Query: 209 FSIKSDVFSFGVLLLKIVS 227
FS+ SDV+SFGV+L ++ +
Sbjct: 197 FSVASDVWSFGVVLYELFT 215
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 95/199 (47%), Gaps = 31/199 (15%)
Query: 56 LGEGGFGPVYKGVLKNGD----EIAVKRLS-----GRSGQGLRE--------LKNKLRLL 98
+G G FG VY G L + D AVK L+ G Q L E N L LL
Sbjct: 56 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 115
Query: 99 GCCIDKD-EKILIYEYMPNKSLDFFLFDWVTRVRIIE------GIAQGLLYLHQYSRVRI 151
G C+ + +++ YM + L F+ + + + +A+G+ YL + +
Sbjct: 116 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---ASKKF 172
Query: 152 IHRDLKVSNILLDKDMNPKISDFGIARICRGNE---LQANTGRIVGTYRYMSPEYAIQGI 208
+HRDL N +LD+ K++DFG+AR E + TG + ++M+ E
Sbjct: 173 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV-KWMALESLQTQK 231
Query: 209 FSIKSDVFSFGVLLLKIVS 227
F+ KSDV+SFGVLL ++++
Sbjct: 232 FTTKSDVWSFGVLLWELMT 250
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 95/199 (47%), Gaps = 31/199 (15%)
Query: 56 LGEGGFGPVYKGVLKNGD----EIAVKRLS-----GRSGQGLRE--------LKNKLRLL 98
+G G FG VY G L + D AVK L+ G Q L E N L LL
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 99 GCCIDKD-EKILIYEYMPNKSLDFFLFDWVTRVRIIE------GIAQGLLYLHQYSRVRI 151
G C+ + +++ YM + L F+ + + + +A+G+ YL + +
Sbjct: 96 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---ASKKF 152
Query: 152 IHRDLKVSNILLDKDMNPKISDFGIARICRGNE---LQANTGRIVGTYRYMSPEYAIQGI 208
+HRDL N +LD+ K++DFG+AR E + TG + ++M+ E
Sbjct: 153 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV-KWMALESLQTQK 211
Query: 209 FSIKSDVFSFGVLLLKIVS 227
F+ KSDV+SFGVLL ++++
Sbjct: 212 FTTKSDVWSFGVLLWELMT 230
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 95/199 (47%), Gaps = 31/199 (15%)
Query: 56 LGEGGFGPVYKGVLKNGD----EIAVKRLS-----GRSGQGLRE--------LKNKLRLL 98
+G G FG VY G L + D AVK L+ G Q L E N L LL
Sbjct: 35 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 94
Query: 99 GCCIDKD-EKILIYEYMPNKSLDFFLFDWVTRVRIIE------GIAQGLLYLHQYSRVRI 151
G C+ + +++ YM + L F+ + + + +A+G+ YL + +
Sbjct: 95 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---ASKKF 151
Query: 152 IHRDLKVSNILLDKDMNPKISDFGIARICRGNE---LQANTGRIVGTYRYMSPEYAIQGI 208
+HRDL N +LD+ K++DFG+AR E + TG + ++M+ E
Sbjct: 152 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV-KWMALESLQTQK 210
Query: 209 FSIKSDVFSFGVLLLKIVS 227
F+ KSDV+SFGVLL ++++
Sbjct: 211 FTTKSDVWSFGVLLWELMT 229
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 95/199 (47%), Gaps = 31/199 (15%)
Query: 56 LGEGGFGPVYKGVLKNGD----EIAVKRLS-----GRSGQGLRE--------LKNKLRLL 98
+G G FG VY G L + D AVK L+ G Q L E N L LL
Sbjct: 30 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 89
Query: 99 GCCIDKD-EKILIYEYMPNKSLDFFLFDWVTRVRIIE------GIAQGLLYLHQYSRVRI 151
G C+ + +++ YM + L F+ + + + +A+G+ YL + +
Sbjct: 90 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---ASKKF 146
Query: 152 IHRDLKVSNILLDKDMNPKISDFGIARICRGNE---LQANTGRIVGTYRYMSPEYAIQGI 208
+HRDL N +LD+ K++DFG+AR E + TG + ++M+ E
Sbjct: 147 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV-KWMALESLQTQK 205
Query: 209 FSIKSDVFSFGVLLLKIVS 227
F+ KSDV+SFGVLL ++++
Sbjct: 206 FTTKSDVWSFGVLLWELMT 224
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 97/198 (48%), Gaps = 31/198 (15%)
Query: 56 LGEGGFGPVYKGVLK----NGDEIAVKRLS-GRSGQGLREL------------KNKLRLL 98
+G G FG V G LK +A+K L G + + R+ N + L
Sbjct: 51 IGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLE 110
Query: 99 GCCIDKDEKILIYEYMPNKSLDFFL------FDWVTRVRIIEGIAQGLLYLHQYSRVRII 152
G +++ E+M N +LD FL F + V ++ GIA G+ YL + + +
Sbjct: 111 GVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYL---ADMGYV 167
Query: 153 HRDLKVSNILLDKDMNPKISDFGIARICRGNELQANT---GRIVGTYRYMSPEYAIQGIF 209
HRDL NIL++ ++ K+SDFG++R+ + T G+I R+ +PE F
Sbjct: 168 HRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKI--PVRWTAPEAIQYRKF 225
Query: 210 SIKSDVFSFGVLLLKIVS 227
+ SDV+S+G+++ +++S
Sbjct: 226 TSASDVWSYGIVMWEVMS 243
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 96/228 (42%), Gaps = 51/228 (22%)
Query: 48 NKFSDANKLGEGGFGPVYK----GVL--KNGDEIAVKRLSGRSGQGL-----REL----- 91
N +GEG FG V++ G+L + +AVK L + + RE
Sbjct: 47 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAE 106
Query: 92 ---KNKLRLLGCCIDKDEKILIYEYMPNKSLDFFL-------------FDWVTRVR---- 131
N ++LLG C L++EYM L+ FL D TR R
Sbjct: 107 FDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSP 166
Query: 132 ------------IIEGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARI 179
I +A G+ YL S + +HRDL N L+ ++M KI+DFG++R
Sbjct: 167 GPPPLSCAEQLCIARQVAAGMAYL---SERKFVHRDLATRNCLVGENMVVKIADFGLSRN 223
Query: 180 CRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVS 227
+ G R+M PE ++ +SDV+++GV+L +I S
Sbjct: 224 IYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 91/191 (47%), Gaps = 21/191 (10%)
Query: 54 NKLGEGGFGPVYKGVLKNGDEIAVKRL---SGRSGQGLRELK-------NKL-RLLGCCI 102
+LG G FG V G + ++A+K + S + + E K KL +L G C
Sbjct: 10 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 69
Query: 103 DKDEKILIYEYMPNKSLDFFLFDWVTR------VRIIEGIAQGLLYLHQYSRVRIIHRDL 156
+ +I EYM N L +L + R + + + + + + YL + +HRDL
Sbjct: 70 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLES---KQFLHRDL 126
Query: 157 KVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVF 216
N L++ K+SDFG++R +E ++ G R+ PE + FS KSD++
Sbjct: 127 AARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPV-RWSPPEVLMYSKFSSKSDIW 185
Query: 217 SFGVLLLKIVS 227
+FGVL+ +I S
Sbjct: 186 AFGVLMWEIYS 196
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 121/296 (40%), Gaps = 61/296 (20%)
Query: 56 LGEGGFG--------PVYKGVLKNGDEIAVKRLSGRSG----QGLRELKNKLRLL----- 98
LGEG FG P G G+ +AVK L +G G ++ + LR L
Sbjct: 39 LGEGHFGKVSLYCYDPTNDG---TGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHI 95
Query: 99 ----GCCIDKDEK--ILIYEYMPNKSLDFFLFDWVTRVRI--------IEGIAQGLLYLH 144
GCC D L+ EY+P SL D++ R I + I +G+ YLH
Sbjct: 96 IKYKGCCEDAGAASLQLVMEYVPLGSLR----DYLPRHSIGLAQLLLFAQQICEGMAYLH 151
Query: 145 QYSRVRIIHRDLKVSNILLDKDMNPKISDFGIAR-ICRGNELQANTGRIVGTYRYMSPEY 203
IHRDL N+LLD D KI DFG+A+ + G+E + +PE
Sbjct: 152 A---QHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPEC 208
Query: 204 AIQGIFSIKSDVFSFGVLLLKIVSGKKTTGFYRTYSFTLLGYISENIYEFPSVDTHNVKT 263
+ F SDV+SFGV L ++++ ++ T L+G I++
Sbjct: 209 LKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIG-IAQG-------------- 253
Query: 264 FGFLHLTIFKLFSISSVGLSNDIVCLCILRYVNIALLCVQESADDRPTMNDVVSML 319
+T+ +L + G C ++ C + A RPT +++ +L
Sbjct: 254 ----QMTVLRLTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPIL 305
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 95/199 (47%), Gaps = 31/199 (15%)
Query: 56 LGEGGFGPVYKGVLKNGD----EIAVKRLS-----GRSGQGLRE--------LKNKLRLL 98
+G G FG VY G L + D AVK L+ G Q L E N L LL
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 99 GCCIDKD-EKILIYEYMPNKSLDFFLFDWVTRVRIIE------GIAQGLLYLHQYSRVRI 151
G C+ + +++ YM + L F+ + + + +A+G+ +L + +
Sbjct: 96 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---ASKKF 152
Query: 152 IHRDLKVSNILLDKDMNPKISDFGIARICRGNELQA---NTGRIVGTYRYMSPEYAIQGI 208
+HRDL N +LD+ K++DFG+AR E + TG + ++M+ E
Sbjct: 153 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV-KWMALESLQTQK 211
Query: 209 FSIKSDVFSFGVLLLKIVS 227
F+ KSDV+SFGVLL ++++
Sbjct: 212 FTTKSDVWSFGVLLWELMT 230
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 95/199 (47%), Gaps = 31/199 (15%)
Query: 56 LGEGGFGPVYKGVLKNGD----EIAVKRLS-----GRSGQGLRE--------LKNKLRLL 98
+G G FG VY G L + D AVK L+ G Q L E N L LL
Sbjct: 43 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 102
Query: 99 GCCIDKD-EKILIYEYMPNKSLDFFLFDWVTRVRIIE------GIAQGLLYLHQYSRVRI 151
G C+ + +++ YM + L F+ + + + +A+G+ +L + +
Sbjct: 103 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---ASKKF 159
Query: 152 IHRDLKVSNILLDKDMNPKISDFGIARICRGNELQA---NTGRIVGTYRYMSPEYAIQGI 208
+HRDL N +LD+ K++DFG+AR E + TG + ++M+ E
Sbjct: 160 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV-KWMALESLQTQK 218
Query: 209 FSIKSDVFSFGVLLLKIVS 227
F+ KSDV+SFGVLL ++++
Sbjct: 219 FTTKSDVWSFGVLLWELMT 237
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 91/191 (47%), Gaps = 21/191 (10%)
Query: 54 NKLGEGGFGPVYKGVLKNGDEIAVKRL---SGRSGQGLRELK-------NKL-RLLGCCI 102
+LG G FG V G + ++A+K + S + + E K KL +L G C
Sbjct: 14 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 73
Query: 103 DKDEKILIYEYMPNKSLDFFLFDWVTR------VRIIEGIAQGLLYLHQYSRVRIIHRDL 156
+ +I EYM N L +L + R + + + + + + YL + +HRDL
Sbjct: 74 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLES---KQFLHRDL 130
Query: 157 KVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVF 216
N L++ K+SDFG++R +E ++ G R+ PE + FS KSD++
Sbjct: 131 AARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPV-RWSPPEVLMYSKFSSKSDIW 189
Query: 217 SFGVLLLKIVS 227
+FGVL+ +I S
Sbjct: 190 AFGVLMWEIYS 200
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 95/199 (47%), Gaps = 31/199 (15%)
Query: 56 LGEGGFGPVYKGVLKNGD----EIAVKRLS-----GRSGQGLRE--------LKNKLRLL 98
+G G FG VY G L + D AVK L+ G Q L E N L LL
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 99 GCCIDKD-EKILIYEYMPNKSLDFFLFDWVTRVRIIE------GIAQGLLYLHQYSRVRI 151
G C+ + +++ YM + L F+ + + + +A+G+ +L + +
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---ASKKF 154
Query: 152 IHRDLKVSNILLDKDMNPKISDFGIARICRGNELQA---NTGRIVGTYRYMSPEYAIQGI 208
+HRDL N +LD+ K++DFG+AR E + TG + ++M+ E
Sbjct: 155 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV-KWMALESLQTQK 213
Query: 209 FSIKSDVFSFGVLLLKIVS 227
F+ KSDV+SFGVLL ++++
Sbjct: 214 FTTKSDVWSFGVLLWELMT 232
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 91/191 (47%), Gaps = 21/191 (10%)
Query: 54 NKLGEGGFGPVYKGVLKNGDEIAVKRL---SGRSGQGLRELK-------NKL-RLLGCCI 102
+LG G FG V G + ++A+K + S + + E K KL +L G C
Sbjct: 30 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 89
Query: 103 DKDEKILIYEYMPNKSLDFFLFDWVTR------VRIIEGIAQGLLYLHQYSRVRIIHRDL 156
+ +I EYM N L +L + R + + + + + + YL + +HRDL
Sbjct: 90 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLES---KQFLHRDL 146
Query: 157 KVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVF 216
N L++ K+SDFG++R +E ++ G R+ PE + FS KSD++
Sbjct: 147 AARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPV-RWSPPEVLMYSKFSSKSDIW 205
Query: 217 SFGVLLLKIVS 227
+FGVL+ +I S
Sbjct: 206 AFGVLMWEIYS 216
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 95/200 (47%), Gaps = 29/200 (14%)
Query: 54 NKLGEGGFGPV----YKGVLKN-GDEIAVKRLSGRSGQGLRELKNKLRLL---------- 98
+LG+G FG V Y + N G+ +AVK+L + + LR+ + ++ +L
Sbjct: 17 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 76
Query: 99 --GCCIDKDEK--ILIYEYMPNKSLDFFL------FDWVTRVRIIEGIAQGLLYLHQYSR 148
G C + LI EY+P SL +L D + ++ I +G+ YL
Sbjct: 77 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GT 133
Query: 149 VRIIHRDLKVSNILLDKDMNPKISDFGIARIC-RGNELQANTGRIVGTYRYMSPEYAIQG 207
R IHR+L NIL++ + KI DFG+ ++ + E + +PE +
Sbjct: 134 KRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTES 193
Query: 208 IFSIKSDVFSFGVLLLKIVS 227
FS+ SDV+SFGV+L ++ +
Sbjct: 194 KFSVASDVWSFGVVLYELFT 213
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 95/199 (47%), Gaps = 31/199 (15%)
Query: 56 LGEGGFGPVYKGVLKNGD----EIAVKRLS-----GRSGQGLRE--------LKNKLRLL 98
+G G FG VY G L + D AVK L+ G Q L E N L LL
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 99 GCCIDKD-EKILIYEYMPNKSLDFFLFDWVTRVRIIE------GIAQGLLYLHQYSRVRI 151
G C+ + +++ YM + L F+ + + + +A+G+ +L + +
Sbjct: 99 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---ASKKF 155
Query: 152 IHRDLKVSNILLDKDMNPKISDFGIARICRGNELQA---NTGRIVGTYRYMSPEYAIQGI 208
+HRDL N +LD+ K++DFG+AR E + TG + ++M+ E
Sbjct: 156 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV-KWMALESLQTQK 214
Query: 209 FSIKSDVFSFGVLLLKIVS 227
F+ KSDV+SFGVLL ++++
Sbjct: 215 FTTKSDVWSFGVLLWELMT 233
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 105/244 (43%), Gaps = 53/244 (21%)
Query: 33 DQLPL--------FSFSSVSTATNKFSDANKLGEGGFGPVYK----GVLKNGDE--IAVK 78
D+LPL + S ++ LG G FG V + G+ K +AVK
Sbjct: 6 DELPLDEHCERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVK 65
Query: 79 RL-SGRSGQGLRELKNKLR-------------LLGCCIDKDEKILIY------------- 111
L G + R L ++L+ LLG C +++
Sbjct: 66 MLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 125
Query: 112 -----EYMPNKSLDFFLFDWVTRVRIIE---GIAQGLLYLHQYSRVRIIHRDLKVSNILL 163
E++P K D + D++T +I +A+G+ +L + + IHRDL NILL
Sbjct: 126 RSKRNEFVPYKPEDLYK-DFLTLEHLIXYSFQVAKGMEFL---ASRKXIHRDLAARNILL 181
Query: 164 DKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLL 223
+ KI DFG+AR + G ++M+PE +++I+SDV+SFGVLL
Sbjct: 182 SEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLW 241
Query: 224 KIVS 227
+I S
Sbjct: 242 EIFS 245
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 95/199 (47%), Gaps = 31/199 (15%)
Query: 56 LGEGGFGPVYKGVLKNGD----EIAVKRLS-----GRSGQGLRE--------LKNKLRLL 98
+G G FG VY G L + D AVK L+ G Q L E N L LL
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 99 GCCIDKD-EKILIYEYMPNKSLDFFLFDWVTRVRIIE------GIAQGLLYLHQYSRVRI 151
G C+ + +++ YM + L F+ + + + +A+G+ +L + +
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---ASKKF 154
Query: 152 IHRDLKVSNILLDKDMNPKISDFGIARICRGNELQA---NTGRIVGTYRYMSPEYAIQGI 208
+HRDL N +LD+ K++DFG+AR E + TG + ++M+ E
Sbjct: 155 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV-KWMALESLQTQK 213
Query: 209 FSIKSDVFSFGVLLLKIVS 227
F+ KSDV+SFGVLL ++++
Sbjct: 214 FTTKSDVWSFGVLLWELMT 232
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 91/191 (47%), Gaps = 21/191 (10%)
Query: 54 NKLGEGGFGPVYKGVLKNGDEIAVKRL---SGRSGQGLRELK-------NKL-RLLGCCI 102
+LG G FG V G + ++A+K + S + + E K KL +L G C
Sbjct: 15 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 74
Query: 103 DKDEKILIYEYMPNKSLDFFLFDWVTR------VRIIEGIAQGLLYLHQYSRVRIIHRDL 156
+ +I EYM N L +L + R + + + + + + YL + +HRDL
Sbjct: 75 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLES---KQFLHRDL 131
Query: 157 KVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVF 216
N L++ K+SDFG++R +E ++ G R+ PE + FS KSD++
Sbjct: 132 AARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPV-RWSPPEVLMYSKFSSKSDIW 190
Query: 217 SFGVLLLKIVS 227
+FGVL+ +I S
Sbjct: 191 AFGVLMWEIYS 201
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 105/204 (51%), Gaps = 44/204 (21%)
Query: 56 LGEGGFGPVYKGV-LKNGD----EIAVKRL-SGRSGQGLRELKNKL------------RL 97
LG G FG VYKG+ + +G+ +A+K L S + +E+ ++ RL
Sbjct: 25 LGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRL 84
Query: 98 LGCCIDKDEKILIYEYMPNKSL-DFF-----------LFDWVTRVRIIEGIAQGLLYLHQ 145
LG C+ + L+ + MP L D L +W + IA+G+ YL
Sbjct: 85 LGICLTSTVQ-LVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQ------IAKGMSYLED 137
Query: 146 YSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQ--ANTGRIVGTYRYMSPEY 203
VR++HRDL N+L+ + KI+DFG+AR+ +E + A+ G++ ++M+ E
Sbjct: 138 ---VRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKV--PIKWMALES 192
Query: 204 AIQGIFSIKSDVFSFGVLLLKIVS 227
++ F+ +SDV+S+GV + ++++
Sbjct: 193 ILRRRFTHQSDVWSYGVTVWELMT 216
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 91/191 (47%), Gaps = 21/191 (10%)
Query: 54 NKLGEGGFGPVYKGVLKNGDEIAVKRL---SGRSGQGLRELK-------NKL-RLLGCCI 102
+LG G FG V G + ++A+K + S + + E K KL +L G C
Sbjct: 21 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 80
Query: 103 DKDEKILIYEYMPNKSLDFFLFDWVTR------VRIIEGIAQGLLYLHQYSRVRIIHRDL 156
+ +I EYM N L +L + R + + + + + + YL + +HRDL
Sbjct: 81 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLES---KQFLHRDL 137
Query: 157 KVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVF 216
N L++ K+SDFG++R +E ++ G R+ PE + FS KSD++
Sbjct: 138 AARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPV-RWSPPEVLMYSKFSSKSDIW 196
Query: 217 SFGVLLLKIVS 227
+FGVL+ +I S
Sbjct: 197 AFGVLMWEIYS 207
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 95/199 (47%), Gaps = 31/199 (15%)
Query: 56 LGEGGFGPVYKGVLKNGD----EIAVKRLS-----GRSGQGLRE--------LKNKLRLL 98
+G G FG VY G L + D AVK L+ G Q L E N L LL
Sbjct: 97 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 156
Query: 99 GCCIDKD-EKILIYEYMPNKSLDFFLFDWVTRVRIIE------GIAQGLLYLHQYSRVRI 151
G C+ + +++ YM + L F+ + + + +A+G+ +L + +
Sbjct: 157 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---ASKKF 213
Query: 152 IHRDLKVSNILLDKDMNPKISDFGIARICRGNELQA---NTGRIVGTYRYMSPEYAIQGI 208
+HRDL N +LD+ K++DFG+AR E + TG + ++M+ E
Sbjct: 214 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV-KWMALESLQTQK 272
Query: 209 FSIKSDVFSFGVLLLKIVS 227
F+ KSDV+SFGVLL ++++
Sbjct: 273 FTTKSDVWSFGVLLWELMT 291
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 95/199 (47%), Gaps = 31/199 (15%)
Query: 56 LGEGGFGPVYKGVLKNGD----EIAVKRLS-----GRSGQGLRE--------LKNKLRLL 98
+G G FG VY G L + D AVK L+ G Q L E N L LL
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 99 GCCIDKD-EKILIYEYMPNKSLDFFLFDWVTRVRIIE------GIAQGLLYLHQYSRVRI 151
G C+ + +++ YM + L F+ + + + +A+G+ +L + +
Sbjct: 99 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---ASKKF 155
Query: 152 IHRDLKVSNILLDKDMNPKISDFGIARICRGNELQA---NTGRIVGTYRYMSPEYAIQGI 208
+HRDL N +LD+ K++DFG+AR E + TG + ++M+ E
Sbjct: 156 VHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPV-KWMALESLQTQK 214
Query: 209 FSIKSDVFSFGVLLLKIVS 227
F+ KSDV+SFGVLL ++++
Sbjct: 215 FTTKSDVWSFGVLLWELMT 233
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 106/244 (43%), Gaps = 52/244 (21%)
Query: 33 DQLPL--------FSFSSVSTATNKFSDANKLGEGGFGPVYK----GVLKNGD--EIAVK 78
D+LPL + S ++ + LG G FG V + G+ K +AVK
Sbjct: 5 DELPLDEHCERLPYDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVK 64
Query: 79 RL-SGRSGQGLRELKNKLR-------------LLGCCIDKDEKILIY------------- 111
L G + R L ++L+ LLG C +++
Sbjct: 65 MLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 124
Query: 112 -----EYMPNKSLDFFLFDWVTRVRIIE---GIAQGLLYLHQYSRVRIIHRDLKVSNILL 163
E++P K+ + D++T +I +A+G+ +L + + IHRDL NILL
Sbjct: 125 RSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILL 181
Query: 164 DKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLL 223
+ KI DFG+AR + G ++M+PE +++I+SDV+SFGVLL
Sbjct: 182 SEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLW 241
Query: 224 KIVS 227
+I S
Sbjct: 242 EIFS 245
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 62/108 (57%), Gaps = 9/108 (8%)
Query: 127 VTRVRIIEGIA---QGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARIC--R 181
+T R IE IA Q L + HQ IIHRD+K +NI++ K+ DFGIAR
Sbjct: 113 MTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADS 169
Query: 182 GNELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGK 229
GN + T ++GT +Y+SPE A +SDV+S G +L ++++G+
Sbjct: 170 GNSV-TQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 62/108 (57%), Gaps = 9/108 (8%)
Query: 127 VTRVRIIEGIA---QGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARIC--R 181
+T R IE IA Q L + HQ IIHRD+K +NI++ K+ DFGIAR
Sbjct: 113 MTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADS 169
Query: 182 GNELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGK 229
GN + T ++GT +Y+SPE A +SDV+S G +L ++++G+
Sbjct: 170 GNSV-TQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 98/203 (48%), Gaps = 27/203 (13%)
Query: 49 KFSDANKLGEGGFGPVY--KGVLKNGDEIAVKRL--SGRSGQGL-----RELKNKLRL-- 97
++ +KLG GG VY + + N ++A+K + R + RE+ N +L
Sbjct: 12 RYKIVDKLGGGGMSTVYLAEDTILNI-KVAIKAIFIPPREKEETLKRFEREVHNSSQLSH 70
Query: 98 --LGCCIDKDEK----ILIYEYMPNKSLDFFL-----FDWVTRVRIIEGIAQGLLYLHQY 146
+ ID DE+ L+ EY+ +L ++ T + I G+ + H
Sbjct: 71 QNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHD- 129
Query: 147 SRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQ 206
+RI+HRD+K NIL+D + KI DFGIA+ L T ++GT +Y SPE A
Sbjct: 130 --MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSL-TQTNHVLGTVQYFSPEQAKG 186
Query: 207 GIFSIKSDVFSFGVLLLKIVSGK 229
+D++S G++L +++ G+
Sbjct: 187 EATDECTDIYSIGIVLYEMLVGE 209
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 91/191 (47%), Gaps = 21/191 (10%)
Query: 54 NKLGEGGFGPVYKGVLKNGDEIAVKRL---SGRSGQGLRELK-------NKL-RLLGCCI 102
+LG G FG V G + ++A+K + S + + E K KL +L G C
Sbjct: 15 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 74
Query: 103 DKDEKILIYEYMPNKSLDFFLFDWVTR------VRIIEGIAQGLLYLHQYSRVRIIHRDL 156
+ +I EYM N L +L + R + + + + + + YL + +HRDL
Sbjct: 75 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLES---KQFLHRDL 131
Query: 157 KVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVF 216
N L++ K+SDFG++R +E ++ G R+ PE + FS KSD++
Sbjct: 132 AARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPV-RWSPPEVLMYSKFSSKSDIW 190
Query: 217 SFGVLLLKIVS 227
+FGVL+ +I S
Sbjct: 191 AFGVLMWEIYS 201
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 112/254 (44%), Gaps = 45/254 (17%)
Query: 40 FSSVSTATNKFSDA----NKLGEGGFGPVYKGVLKNGDE------IAVKRLSGRSGQGLR 89
F ++T T +F+D +LG+G F V + V K + I K+LS R Q L
Sbjct: 20 FQXMATCT-RFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLE 78
Query: 90 ELKNKLRLLGCCIDKDEKIL-IYEYMPNKSLDFFLFDWVTRVRIIEGIA----------- 137
RLL K I+ +++ + + + +FD VT + E I
Sbjct: 79 REARICRLL-----KHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADAS 133
Query: 138 -------QGLLYLHQYSRVRIIHRDLKVSNILLD---KDMNPKISDFGIARICRGNELQA 187
+ + ++HQ+ I+HRDLK N+LL K K++DFG+A +G E QA
Sbjct: 134 HCIHQILESVNHIHQHD---IVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQG-EQQA 189
Query: 188 NTGRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGKKTTGFYRTYSFTLLGYIS 247
G GT Y+SPE + + D+++ GV+L ++ G F+ L I
Sbjct: 190 WFG-FAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPP--FWDEDQHKLYQQIK 246
Query: 248 ENIYEFPSVDTHNV 261
Y+FPS + V
Sbjct: 247 AGAYDFPSPEWDTV 260
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 91/191 (47%), Gaps = 21/191 (10%)
Query: 54 NKLGEGGFGPVYKGVLKNGDEIAVKRL---SGRSGQGLRELK-------NKL-RLLGCCI 102
+LG G FG V G + ++A+K + S + + E K KL +L G C
Sbjct: 30 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 89
Query: 103 DKDEKILIYEYMPNKSLDFFLFDWVTR------VRIIEGIAQGLLYLHQYSRVRIIHRDL 156
+ +I EYM N L +L + R + + + + + + YL + +HRDL
Sbjct: 90 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLES---KQFLHRDL 146
Query: 157 KVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVF 216
N L++ K+SDFG++R +E ++ G R+ PE + FS KSD++
Sbjct: 147 AARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPV-RWSPPEVLMYSKFSSKSDIW 205
Query: 217 SFGVLLLKIVS 227
+FGVL+ +I S
Sbjct: 206 AFGVLMWEIYS 216
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 108/245 (44%), Gaps = 40/245 (16%)
Query: 45 TATNKFSDANKLGEGGFGPVYKGV-LKNGDEIAVK-----RLSGRSGQGLRELKNKLRLL 98
+ T+++ +G+G F V + V L G E A K +LS R Q L RLL
Sbjct: 1 SMTDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLL 60
Query: 99 GCCIDKDEKIL-IYEYMPNKSLDFFLFDWVT------------------RVRIIEGIAQG 139
K I+ +++ + + + +FD VT I+ I +
Sbjct: 61 -----KHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEA 115
Query: 140 LLYLHQYSRVRIIHRDLKVSNILLD---KDMNPKISDFGIARICRGNELQANTGRIVGTY 196
+L+ HQ ++HRDLK N+LL K K++DFG+A +G++ QA G GT
Sbjct: 116 VLHCHQMG---VVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQ-QAWFG-FAGTP 170
Query: 197 RYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGKKTTGFYRTYSFTLLGYISENIYEFPSV 256
Y+SPE + + D+++ GV+L ++ G F+ L I Y+FPS
Sbjct: 171 GYLSPEVLRKEAYGKPVDIWACGVILYILLVG--YPPFWDEDQHKLYQQIKAGAYDFPSP 228
Query: 257 DTHNV 261
+ V
Sbjct: 229 EWDTV 233
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 93/194 (47%), Gaps = 27/194 (13%)
Query: 56 LGEGGFGPVYKGVLKNGDEIAVKRLSGRSGQG-----LREL-----KNKLRLLGCCIDKD 105
+G G FG V K + D +A+K++ S + LR+L N ++L G C++
Sbjct: 17 VGRGAFGVVCKAKWRAKD-VAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACLNP- 74
Query: 106 EKILIYEYMPNKSLDFFL-----FDWVTRVRIIEGI---AQGLLYLHQYSRVRIIHRDLK 157
L+ EY SL L + T + +QG+ YLH +IHRDLK
Sbjct: 75 -VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLK 133
Query: 158 VSNILLDKDMNP-KISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVF 216
N+LL KI DFG A C ++Q + G+ +M+PE +S K DVF
Sbjct: 134 PPNLLLVAGGTVLKICDFGTA--C---DIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVF 188
Query: 217 SFGVLLLKIVSGKK 230
S+G++L ++++ +K
Sbjct: 189 SWGIILWEVITRRK 202
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 100/216 (46%), Gaps = 35/216 (16%)
Query: 56 LGEGGFGPVYKGVLKNGDEIAVKRLSGRSGQGL---RELKNKLRL-----LGCCIDKD-- 105
+G+G +G V++G + G+ +AVK S R + EL N + L LG I D
Sbjct: 45 VGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGF-IASDMT 102
Query: 106 ------EKILIYEYMPNKSLDFFL----FDWVTRVRIIEGIAQGLLYLH-----QYSRVR 150
+ LI Y SL +L D V+ +RI+ IA GL +LH +
Sbjct: 103 SRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPA 162
Query: 151 IIHRDLKVSNILLDKDMNPKISDFGIARICRG--NELQANTGRIVGTYRYMSPEYAIQGI 208
I HRDLK NIL+ K+ I+D G+A + N+L VGT RYM+PE + I
Sbjct: 163 IAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETI 222
Query: 209 ------FSIKSDVFSFGVLLLKIVSGKKTTGFYRTY 238
+ D+++FG++L ++ + G Y
Sbjct: 223 QVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDY 258
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 93/194 (47%), Gaps = 27/194 (13%)
Query: 56 LGEGGFGPVYKGVLKNGDEIAVKRLSGRSGQG-----LREL-----KNKLRLLGCCIDKD 105
+G G FG V K + D +A+K++ S + LR+L N ++L G C++
Sbjct: 16 VGRGAFGVVCKAKWRAKD-VAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACLNP- 73
Query: 106 EKILIYEYMPNKSLDFFL-----FDWVTRVRIIEGI---AQGLLYLHQYSRVRIIHRDLK 157
L+ EY SL L + T + +QG+ YLH +IHRDLK
Sbjct: 74 -VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLK 132
Query: 158 VSNILLDKDMNP-KISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVF 216
N+LL KI DFG A C ++Q + G+ +M+PE +S K DVF
Sbjct: 133 PPNLLLVAGGTVLKICDFGTA--C---DIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVF 187
Query: 217 SFGVLLLKIVSGKK 230
S+G++L ++++ +K
Sbjct: 188 SWGIILWEVITRRK 201
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 62/108 (57%), Gaps = 9/108 (8%)
Query: 127 VTRVRIIEGIA---QGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARIC--R 181
+T R IE IA Q L + HQ IIHRD+K +NI++ K+ DFGIAR
Sbjct: 130 MTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADS 186
Query: 182 GNELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGK 229
GN + T ++GT +Y+SPE A +SDV+S G +L ++++G+
Sbjct: 187 GNSV-TQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 233
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 104/227 (45%), Gaps = 35/227 (15%)
Query: 45 TATNKFSDANKLGEGGFGPVYKGVLKNGDEIAVKRLSGRSGQGL---RELKNKLRL---- 97
T ++ + +G+G +G V++G + G+ +AVK S R + EL N + L
Sbjct: 5 TVAHQITLLECVGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFRETELYNTVMLRHEN 63
Query: 98 -LGCCIDKD--------EKILIYEYMPNKSLDFFL----FDWVTRVRIIEGIAQGLLYLH 144
LG I D + LI Y SL +L D V+ +RI+ IA GL +LH
Sbjct: 64 ILGF-IASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLH 122
Query: 145 -----QYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRG--NELQANTGRIVGTYR 197
+ I HRDLK NIL+ K+ I+D G+A + N+L VGT R
Sbjct: 123 IEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKR 182
Query: 198 YMSPEYAIQGI------FSIKSDVFSFGVLLLKIVSGKKTTGFYRTY 238
YM+PE + I + D+++FG++L ++ + G Y
Sbjct: 183 YMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDY 229
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 115/235 (48%), Gaps = 34/235 (14%)
Query: 48 NKFSDANKLGEGGFGPVYKGVLKNGDEIAVKRL------SGRSGQGLREL--------KN 93
K+ K+GEG +G VYK G +A+KR+ G +RE+ N
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPN 80
Query: 94 KLRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVT-----RVRI-IEGIAQGLLYLHQYS 147
+ L+ + L++E+M K L L + T +++I + + +G+ + HQ+
Sbjct: 81 IVSLIDVIHSERCLTLVFEFM-EKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQH- 138
Query: 148 RVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAI-Q 206
RI+HRDLK N+L++ D K++DFG+AR G +++ T +V T Y +P+ +
Sbjct: 139 --RILHRDLKPQNLLINSDGALKLADFGLAR-AFGIPVRSYTHEVV-TLWYRAPDVLMGS 194
Query: 207 GIFSIKSDVFSFGVLLLKIVSGKK-----TTGFYRTYSFTLLGYISENIYEFPSV 256
+S D++S G + ++++GK T F++LG + N E+P V
Sbjct: 195 KKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILG--TPNPREWPQV 247
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 58/95 (61%), Gaps = 7/95 (7%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNEL-QANTGRIVG 194
I GL +LH I++RDLK+ NILLDKD + KI+DFG +C+ N L A T G
Sbjct: 128 IILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFG---MCKENMLGDAKTNEFCG 181
Query: 195 TYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGK 229
T Y++PE + ++ D +SFGVLL +++ G+
Sbjct: 182 TPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 216
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 100/216 (46%), Gaps = 35/216 (16%)
Query: 56 LGEGGFGPVYKGVLKNGDEIAVKRLSGRSGQGL---RELKNKLRL-----LGCCIDKD-- 105
+G+G +G V++G + G+ +AVK S R + EL N + L LG I D
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGF-IASDMT 73
Query: 106 ------EKILIYEYMPNKSLDFFL----FDWVTRVRIIEGIAQGLLYLH-----QYSRVR 150
+ LI Y SL +L D V+ +RI+ IA GL +LH +
Sbjct: 74 SRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPA 133
Query: 151 IIHRDLKVSNILLDKDMNPKISDFGIARICRG--NELQANTGRIVGTYRYMSPEYAIQGI 208
I HRDLK NIL+ K+ I+D G+A + N+L VGT RYM+PE + I
Sbjct: 134 IAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETI 193
Query: 209 ------FSIKSDVFSFGVLLLKIVSGKKTTGFYRTY 238
+ D+++FG++L ++ + G Y
Sbjct: 194 QVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDY 229
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 115/235 (48%), Gaps = 34/235 (14%)
Query: 48 NKFSDANKLGEGGFGPVYKGVLKNGDEIAVKRL------SGRSGQGLREL--------KN 93
K+ K+GEG +G VYK G +A+KR+ G +RE+ N
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPN 80
Query: 94 KLRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVT-----RVRI-IEGIAQGLLYLHQYS 147
+ L+ + L++E+M K L L + T +++I + + +G+ + HQ+
Sbjct: 81 IVSLIDVIHSERCLTLVFEFM-EKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQH- 138
Query: 148 RVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAI-Q 206
RI+HRDLK N+L++ D K++DFG+AR G +++ T +V T Y +P+ +
Sbjct: 139 --RILHRDLKPQNLLINSDGALKLADFGLAR-AFGIPVRSYTHEVV-TLWYRAPDVLMGS 194
Query: 207 GIFSIKSDVFSFGVLLLKIVSGKK-----TTGFYRTYSFTLLGYISENIYEFPSV 256
+S D++S G + ++++GK T F++LG + N E+P V
Sbjct: 195 KKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILG--TPNPREWPQV 247
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 53/92 (57%), Gaps = 3/92 (3%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGT 195
+A+G+ +L S + IHRDL NILL ++ KI DFG+AR N G
Sbjct: 208 VARGMEFL---SSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLP 264
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVS 227
++M+PE I+S KSDV+S+GVLL +I S
Sbjct: 265 LKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 95/199 (47%), Gaps = 49/199 (24%)
Query: 56 LGEGGFGPVYKGV-LKNGDEIAVK-----RLSGRSGQG--------LRELKNK--LRLLG 99
LGEG FG V G ++A+K L+ QG LR L++ ++L
Sbjct: 12 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 71
Query: 100 CCIDKDEKILIYEYMPNKSLDFFLFDWVTRV---------RIIEGIAQGLLYLHQYSRVR 150
KDE I++ EY N+ LFD++ + R + I + Y H++ +
Sbjct: 72 VIKSKDEIIMVIEYAGNE-----LFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH---K 123
Query: 151 IIHRDLKVSNILLDKDMNPKISDFGIARICR-GNELQANTGRIVGTYRYMSPEYAIQGIF 209
I+HRDLK N+LLD+ +N KI+DFG++ I GN L+ + G SP YA +
Sbjct: 124 IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCG---------SPNYAAPEVI 174
Query: 210 SIK------SDVFSFGVLL 222
S K DV+S GV+L
Sbjct: 175 SGKLYAGPEVDVWSCGVIL 193
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 95/199 (47%), Gaps = 49/199 (24%)
Query: 56 LGEGGFGPVYKGV-LKNGDEIAVK-----RLSGRSGQG--------LRELKNK--LRLLG 99
LGEG FG V G ++A+K L+ QG LR L++ ++L
Sbjct: 22 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 81
Query: 100 CCIDKDEKILIYEYMPNKSLDFFLFDWVTRV---------RIIEGIAQGLLYLHQYSRVR 150
KDE I++ EY N+ LFD++ + R + I + Y H++ +
Sbjct: 82 VIKSKDEIIMVIEYAGNE-----LFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH---K 133
Query: 151 IIHRDLKVSNILLDKDMNPKISDFGIARI-CRGNELQANTGRIVGTYRYMSPEYAIQGIF 209
I+HRDLK N+LLD+ +N KI+DFG++ I GN L+ + G SP YA +
Sbjct: 134 IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCG---------SPNYAAPEVI 184
Query: 210 SIK------SDVFSFGVLL 222
S K DV+S GV+L
Sbjct: 185 SGKLYAGPEVDVWSCGVIL 203
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 95/199 (47%), Gaps = 49/199 (24%)
Query: 56 LGEGGFGPVYKGV-LKNGDEIAVK-----RLSGRSGQG--------LRELKNK--LRLLG 99
LGEG FG V G ++A+K L+ QG LR L++ ++L
Sbjct: 21 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 80
Query: 100 CCIDKDEKILIYEYMPNKSLDFFLFDWVTRV---------RIIEGIAQGLLYLHQYSRVR 150
KDE I++ EY N+ LFD++ + R + I + Y H++ +
Sbjct: 81 VIKSKDEIIMVIEYAGNE-----LFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH---K 132
Query: 151 IIHRDLKVSNILLDKDMNPKISDFGIARICR-GNELQANTGRIVGTYRYMSPEYAIQGIF 209
I+HRDLK N+LLD+ +N KI+DFG++ I GN L+ + G SP YA +
Sbjct: 133 IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCG---------SPNYAAPEVI 183
Query: 210 SIK------SDVFSFGVLL 222
S K DV+S GV+L
Sbjct: 184 SGKLYAGPEVDVWSCGVIL 202
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 95/200 (47%), Gaps = 22/200 (11%)
Query: 54 NKLGEGGFGPVYKGVLKNGDEIAVKRLSGRS---------GQGLRELKNK--LRLLGCCI 102
+LG G FG V G K ++AVK + S Q + +L + ++ G C
Sbjct: 14 KELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCS 73
Query: 103 DKDEKILIYEYMPNKSLDFFL------FDWVTRVRIIEGIAQGLLYLHQYSRVRIIHRDL 156
+ ++ EY+ N L +L + + + + +G+ +L + + IHRDL
Sbjct: 74 KEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDL 130
Query: 157 KVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVF 216
N L+D+D+ K+SDFG+ R ++ ++ G ++ +PE +S KSDV+
Sbjct: 131 AARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPV-KWSAPEVFHYFKYSSKSDVW 189
Query: 217 SFGVLLLKIVS-GKKTTGFY 235
+FG+L+ ++ S GK Y
Sbjct: 190 AFGILMWEVFSLGKMPYDLY 209
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 98/198 (49%), Gaps = 34/198 (17%)
Query: 55 KLGEGGFGPVYKGVLKN-GDEIAVKRLSGRSGQGLRELK-------------NKLRLLGC 100
K+GEG G V K+ G ++AVK + R Q REL N + +
Sbjct: 52 KIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQR-RELLFNEVVIMRDYQHFNVVEMYKS 110
Query: 101 CIDKDEKILIYEYMPNKSLDFFLFDWVTRVR--------IIEGIAQGLLYLHQYSRVRII 152
+ +E ++ E++ +L D V++VR + E + Q L YLH +I
Sbjct: 111 YLVGEELWVLMEFLQGGALT----DIVSQVRLNEEQIATVCEAVLQALAYLHAQG---VI 163
Query: 153 HRDLKVSNILLDKDMNPKISDFGI-ARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSI 211
HRD+K +ILL D K+SDFG A+I + +VGT +M+PE + +++
Sbjct: 164 HRDIKSDSILLTLDGRVKLSDFGFCAQISKDV---PKRKXLVGTPYWMAPEVISRSLYAT 220
Query: 212 KSDVFSFGVLLLKIVSGK 229
+ D++S G++++++V G+
Sbjct: 221 EVDIWSLGIMVIEMVDGE 238
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 58/95 (61%), Gaps = 7/95 (7%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNEL-QANTGRIVG 194
I GL +LH I++RDLK+ NILLDKD + KI+DFG +C+ N L A T G
Sbjct: 127 IILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFG---MCKENMLGDAKTNXFCG 180
Query: 195 TYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGK 229
T Y++PE + ++ D +SFGVLL +++ G+
Sbjct: 181 TPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 215
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 106/218 (48%), Gaps = 46/218 (21%)
Query: 45 TATNKFSDANKLGEGGFGPVYKGVLKN-GDEIAVKRLSGRSGQG-----------LRELK 92
+++++F KLG G + VYKG+ K G +A+K + S +G ++ELK
Sbjct: 2 SSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELK 61
Query: 93 --NKLRLLGCCIDKDEKILIYEYMPN---------------KSLDFFL---FDWVTRVRI 132
N +RL +++ L++E+M N + L+ L F W
Sbjct: 62 HENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQW------ 115
Query: 133 IEGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRI 192
+ QGL + H+ +I+HRDLK N+L++K K+ DFG+AR G + + +
Sbjct: 116 --QLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLAR-AFGIPVNTFSSEV 169
Query: 193 VGTYRYMSPEYAIQG-IFSIKSDVFSFGVLLLKIVSGK 229
V T Y +P+ + +S D++S G +L ++++GK
Sbjct: 170 V-TLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 99/199 (49%), Gaps = 34/199 (17%)
Query: 123 LFDWVTRVRIIEGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGI-ARICR 181
+ D T I+ + +GL YLH+ + IHRD+K NILL +D + +I+DFG+ A +
Sbjct: 117 VLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLAT 173
Query: 182 GNELQANTGR--IVGTYRYMSPEY--AIQGIFSIKSDVFSFGVLLLKIVSGKKTTGFYRT 237
G ++ N R VGT +M+PE ++G + K+D++SFG+ +++ +G +++
Sbjct: 174 GGDITRNKVRKTFVGTPCWMAPEVMEQVRG-YDFKADIWSFGITAIELATG--AAPYHKY 230
Query: 238 YSFTLLGYISENIYEFPSVDTHNVKTFGFLHLTIFKLFSISSVGLSNDIVCLCILRYVNI 297
+L +N + PS++T G + K + S + +
Sbjct: 231 PPMKVLMLTLQN--DPPSLET------GVQDKEMLKKYGKS---------------FRKM 267
Query: 298 ALLCVQESADDRPTMNDVV 316
LC+Q+ + RPT +++
Sbjct: 268 ISLCLQKDPEKRPTAAELL 286
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 88/195 (45%), Gaps = 23/195 (11%)
Query: 53 ANKLGEGGFGPVYKGVLKNGDE-IAVKR--------LSGRSGQGLRELK-----NKLRLL 98
++G G FG V+ G L+ + +AVK L + Q R LK N +RL+
Sbjct: 119 GEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLI 178
Query: 99 GCCIDKDEKILIYEYMPNKSLDFFLFDWVTRVRI------IEGIAQGLLYLHQYSRVRII 152
G C K ++ E + FL R+R+ + A G+ YL I
Sbjct: 179 GVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC---CI 235
Query: 153 HRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIK 212
HRDL N L+ + KISDFG++R A+ G ++ +PE G +S +
Sbjct: 236 HRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRYSSE 295
Query: 213 SDVFSFGVLLLKIVS 227
SDV+SFG+LL + S
Sbjct: 296 SDVWSFGILLWETFS 310
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 128/275 (46%), Gaps = 60/275 (21%)
Query: 73 DEIAVKRLSGRSGQ-GLRELKNKLRLLGCC------------IDKDEKILIYEYMPNKS- 118
+++A+KR++ Q + EL +++ + C + KDE L+ + + S
Sbjct: 36 EKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSV 95
Query: 119 LDFF------------LFDWVTRVRIIEGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKD 166
LD + D T I+ + +GL YLH+ + IHRD+K NILL +D
Sbjct: 96 LDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGED 152
Query: 167 MNPKISDFGI-ARICRGNELQANTGR--IVGTYRYMSPEY--AIQGIFSIKSDVFSFGVL 221
+ +I+DFG+ A + G ++ N R VGT +M+PE ++G + K+D++SFG+
Sbjct: 153 GSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRG-YDFKADIWSFGIT 211
Query: 222 LLKIVSGKKTTGFYRTYSFTLLGYISENIYEFPSVDTHNVKTFGFLHLTIFKLFSISSVG 281
+++ +G +++ +L +N + PS++T G + K + S
Sbjct: 212 AIELATG--AAPYHKYPPMKVLMLTLQN--DPPSLET------GVQDKEMLKKYGKS--- 258
Query: 282 LSNDIVCLCILRYVNIALLCVQESADDRPTMNDVV 316
+ + LC+Q+ + RPT +++
Sbjct: 259 ------------FRKMISLCLQKDPEKRPTAAELL 281
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 95/199 (47%), Gaps = 49/199 (24%)
Query: 56 LGEGGFGPVYKGV-LKNGDEIAVK-----RLSGRSGQG--------LRELKNK--LRLLG 99
LGEG FG V G ++A+K L+ QG LR L++ ++L
Sbjct: 16 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 75
Query: 100 CCIDKDEKILIYEYMPNKSLDFFLFDWVTRV---------RIIEGIAQGLLYLHQYSRVR 150
KDE I++ EY N+ LFD++ + R + I + Y H++ +
Sbjct: 76 VIKSKDEIIMVIEYAGNE-----LFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH---K 127
Query: 151 IIHRDLKVSNILLDKDMNPKISDFGIARICR-GNELQANTGRIVGTYRYMSPEYAIQGIF 209
I+HRDLK N+LLD+ +N KI+DFG++ I GN L+ + G SP YA +
Sbjct: 128 IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCG---------SPNYAAPEVI 178
Query: 210 SIK------SDVFSFGVLL 222
S K DV+S GV+L
Sbjct: 179 SGKLYAGPEVDVWSCGVIL 197
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 88/195 (45%), Gaps = 23/195 (11%)
Query: 53 ANKLGEGGFGPVYKGVLKNGDE-IAVKR--------LSGRSGQGLRELK-----NKLRLL 98
++G G FG V+ G L+ + +AVK L + Q R LK N +RL+
Sbjct: 119 GEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLI 178
Query: 99 GCCIDKDEKILIYEYMPNKSLDFFLFDWVTRVRI------IEGIAQGLLYLHQYSRVRII 152
G C K ++ E + FL R+R+ + A G+ YL I
Sbjct: 179 GVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC---CI 235
Query: 153 HRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIK 212
HRDL N L+ + KISDFG++R A+ G ++ +PE G +S +
Sbjct: 236 HRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSE 295
Query: 213 SDVFSFGVLLLKIVS 227
SDV+SFG+LL + S
Sbjct: 296 SDVWSFGILLWETFS 310
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 107/263 (40%), Gaps = 45/263 (17%)
Query: 7 NLKANNVNIELPVNSNLTKRSKKKEVDQLPLFSFSSVSTATNKFSDANK--------LGE 58
L+A + ++ P R+ D P +SF+ +++ + + + LG
Sbjct: 8 ELQAMQMELQSPEYKLSKLRTSTIMTDYNPNYSFAGKTSSISDLKEVPRKNITLIRGLGH 67
Query: 59 GGFGPVYKGVLKNGD------EIAVKRLSGRSGQG-----LREL--------KNKLRLLG 99
G FG VY+G + ++AVK L + L E +N +R +G
Sbjct: 68 GAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIG 127
Query: 100 CCIDKDEKILIYEYMPNKSLDFFLFDWVTR------------VRIIEGIAQGLLYLHQYS 147
+ + ++ E M L FL + R + + IA G YL +
Sbjct: 128 VSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN- 186
Query: 148 RVRIIHRDLKVSNILLD---KDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYA 204
IHRD+ N LL KI DFG+AR G + ++M PE
Sbjct: 187 --HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAF 244
Query: 205 IQGIFSIKSDVFSFGVLLLKIVS 227
++GIF+ K+D +SFGVLL +I S
Sbjct: 245 MEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 94/220 (42%), Gaps = 51/220 (23%)
Query: 56 LGEGGFGPVYK----GVLKNGD--EIAVKRLSGRSGQGLREL--------------KNKL 95
LG G FG V G+ K G ++AVK L ++ RE +N +
Sbjct: 53 LGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIV 112
Query: 96 RLLGCCIDKDEKILIYEYMPNKSLDFFL-----------FDWVTRVRIIE---------- 134
LLG C LI+EY L +L ++ + R+ E
Sbjct: 113 NLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFE 172
Query: 135 -------GIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQA 187
+A+G+ +L S +HRDL N+L+ KI DFG+AR +
Sbjct: 173 DLLCFAYQVAKGMEFLEFKS---CVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYV 229
Query: 188 NTGRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVS 227
G ++M+PE +GI++IKSDV+S+G+LL +I S
Sbjct: 230 VRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 100/202 (49%), Gaps = 27/202 (13%)
Query: 50 FSDANKLGEGGFGPVYKGVLK-NGDEIAVKRL------SGRSGQGLREL--------KNK 94
F K+GEG +G VYK K G+ +A+K++ G +RE+ N
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 95 LRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTRVRI------IEGIAQGLLYLHQYSR 148
++LL +++ L++E++ DF +T + + + + QGL + H +
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 122
Query: 149 VRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQ-G 207
R++HRDLK N+L++ + K++DFG+AR G ++ +V T Y +PE +
Sbjct: 123 -RVLHRDLKPENLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVV-TLWYRAPEILLGCK 179
Query: 208 IFSIKSDVFSFGVLLLKIVSGK 229
+S D++S G + ++V+ +
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 118/272 (43%), Gaps = 56/272 (20%)
Query: 56 LGEGGFGPVYKGVLKNGD----EIAVK--RLSGRSGQGLREL------------KNKLRL 97
LGEG FG V +G LK D ++AVK +L S + + E N +RL
Sbjct: 42 LGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRL 101
Query: 98 LGCCIDKDEK-----ILIYEYMPNKSLDFFLF-----------DWVTRVRIIEGIAQGLL 141
LG CI+ + ++I +M L +L T ++ + IA G+
Sbjct: 102 LGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGME 161
Query: 142 YLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIA-RICRGNELQANTGRIVGT-YRYM 199
YL S +HRDL N +L DM ++DFG++ +I G+ + GRI +++
Sbjct: 162 YL---SNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYR--QGRIAKMPVKWI 216
Query: 200 SPEYAIQGIFSIKSDVFSFGVLLLKIVSGKKT----TGFYRTYSFTLLGY---------- 245
+ E +++ KSDV++FGV + +I + T + Y + L G+
Sbjct: 217 AIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGHRLKQPEDCLD 276
Query: 246 -ISENIYEFPSVDTHNVKTFGFLHLTIFKLFS 276
+ E +Y D + TF L L + KL
Sbjct: 277 ELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLE 308
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 100/202 (49%), Gaps = 27/202 (13%)
Query: 50 FSDANKLGEGGFGPVYKGVLK-NGDEIAVKRL------SGRSGQGLREL--------KNK 94
F K+GEG +G VYK K G+ +A+K++ G +RE+ N
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 95 LRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTRVRI------IEGIAQGLLYLHQYSR 148
++LL +++ L++E++ F +T + + + + QGL + H +
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 122
Query: 149 VRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAI-QG 207
R++HRDLK N+L++ + K++DFG+AR G ++ T +V T Y +PE +
Sbjct: 123 -RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVV-TLWYRAPEILLGXK 179
Query: 208 IFSIKSDVFSFGVLLLKIVSGK 229
+S D++S G + ++V+ +
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 103/243 (42%), Gaps = 53/243 (21%)
Query: 33 DQLPL--------FSFSSVSTATNKFSDANKLGEGGFGPVYK----GVLKNGDE--IAVK 78
D+LPL + S ++ + LG G FG V + G+ K +AVK
Sbjct: 4 DELPLDEHCERLPYDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVK 63
Query: 79 RL-SGRSGQGLRELKNKLR-------------LLGCCIDKDEKILIY------------- 111
L G + R L ++L+ LLG C +++
Sbjct: 64 MLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 123
Query: 112 -----EYMPNKSL--DFFLFDWVTRVRIIEGIAQGLLYLHQYSRVRIIHRDLKVSNILLD 164
E++P K L DF + + +A+G+ +L + + IHRDL NILL
Sbjct: 124 RSKRNEFVPYKDLYKDFLTLEHLIXYSF--QVAKGMEFL---ASRKXIHRDLAARNILLS 178
Query: 165 KDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLK 224
+ KI DFG+AR + G ++M+PE +++I+SDV+SFGVLL +
Sbjct: 179 EKNVVKIXDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE 238
Query: 225 IVS 227
I S
Sbjct: 239 IFS 241
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 99/200 (49%), Gaps = 27/200 (13%)
Query: 50 FSDANKLGEGGFGPVYKGVLK-NGDEIAVKRL------SGRSGQGLREL--------KNK 94
F K+GEG +G VYK K G+ +A+K++ G +RE+ N
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 71
Query: 95 LRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTRVRI------IEGIAQGLLYLHQYSR 148
++LL +++ L++E++ F +T + + + + QGL + H +
Sbjct: 72 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 129
Query: 149 VRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAI-QG 207
R++HRDLK N+L++ + K++DFG+AR G ++ T +V T Y +PE +
Sbjct: 130 -RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVV-TLWYRAPEILLGXK 186
Query: 208 IFSIKSDVFSFGVLLLKIVS 227
+S D++S G + ++V+
Sbjct: 187 YYSTAVDIWSLGCIFAEMVT 206
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 93/194 (47%), Gaps = 23/194 (11%)
Query: 56 LGEGGFGPVYKGVLKNGDE-IAVKRLSGRSGQGLRELKNKLRLLGCCIDKDEKILIYEYM 114
LGEG +G V V + +E +AVK + + E K + ++ + + Y +
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYGHR 74
Query: 115 PNKSLDFFLFDWVT------RV------------RIIEGIAQGLLYLHQYSRVRIIHRDL 156
++ + ++ + R+ R + G++YLH + I HRD+
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDI 131
Query: 157 KVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKS-DV 215
K N+LLD+ N KISDFG+A + R N + ++ GT Y++PE + F + DV
Sbjct: 132 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDV 191
Query: 216 FSFGVLLLKIVSGK 229
+S G++L +++G+
Sbjct: 192 WSCGIVLTAMLAGE 205
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 100/202 (49%), Gaps = 27/202 (13%)
Query: 50 FSDANKLGEGGFGPVYKGVLK-NGDEIAVKRL------SGRSGQGLREL--------KNK 94
F K+GEG +G VYK K G+ +A+K++ G +RE+ N
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 95 LRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTRVRI------IEGIAQGLLYLHQYSR 148
++LL +++ L++E++ F +T + + + + QGL + H +
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 122
Query: 149 VRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQ-G 207
R++HRDLK N+L++ + K++DFG+AR G ++ T +V T Y +PE +
Sbjct: 123 -RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVV-TLWYRAPEILLGCK 179
Query: 208 IFSIKSDVFSFGVLLLKIVSGK 229
+S D++S G + ++V+ +
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 99/200 (49%), Gaps = 27/200 (13%)
Query: 50 FSDANKLGEGGFGPVYKGVLK-NGDEIAVKRL------SGRSGQGLREL--------KNK 94
F K+GEG +G VYK K G+ +A+K++ G +RE+ N
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 95 LRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTRVRI------IEGIAQGLLYLHQYSR 148
++LL +++ L++E++ F +T + + + + QGL + H +
Sbjct: 66 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 123
Query: 149 VRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQ-G 207
R++HRDLK N+L++ + K++DFG+AR G ++ T +V T Y +PE +
Sbjct: 124 -RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVV-TLWYRAPEILLGCK 180
Query: 208 IFSIKSDVFSFGVLLLKIVS 227
+S D++S G + ++V+
Sbjct: 181 YYSTAVDIWSLGCIFAEMVT 200
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 100/202 (49%), Gaps = 27/202 (13%)
Query: 50 FSDANKLGEGGFGPVYKGVLK-NGDEIAVKRL------SGRSGQGLREL--------KNK 94
F K+GEG +G VYK K G+ +A+K++ G +RE+ N
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 95 LRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTRVRI------IEGIAQGLLYLHQYSR 148
++LL +++ L++E++ F +T + + + + QGL + H +
Sbjct: 64 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 121
Query: 149 VRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQ-G 207
R++HRDLK N+L++ + K++DFG+AR G ++ T +V T Y +PE +
Sbjct: 122 -RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVV-TLWYRAPEILLGCK 178
Query: 208 IFSIKSDVFSFGVLLLKIVSGK 229
+S D++S G + ++V+ +
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 100/202 (49%), Gaps = 27/202 (13%)
Query: 50 FSDANKLGEGGFGPVYKGVLK-NGDEIAVKRL------SGRSGQGLREL--------KNK 94
F K+GEG +G VYK K G+ +A+K++ G +RE+ N
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 95 LRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTRVRI------IEGIAQGLLYLHQYSR 148
++LL +++ L++E++ F +T + + + + QGL + H +
Sbjct: 64 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 121
Query: 149 VRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQ-G 207
R++HRDLK N+L++ + K++DFG+AR G ++ T +V T Y +PE +
Sbjct: 122 -RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVV-TLWYRAPEILLGCK 178
Query: 208 IFSIKSDVFSFGVLLLKIVSGK 229
+S D++S G + ++V+ +
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 101/201 (50%), Gaps = 27/201 (13%)
Query: 49 KFSDANKLGEGGFGPVYKGVLKNGDEIAVKRLS-GRSGQG-----------LRELK--NK 94
K+ K+GEG +G VYK G+ A+K++ + +G L+ELK N
Sbjct: 3 KYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNI 62
Query: 95 LRLLGCCIDKDEKILIYEYMPNKSLDFFL------FDWVTRVRIIEGIAQGLLYLHQYSR 148
++L K +L++E++ ++ L L + VT + + G+ Y H
Sbjct: 63 VKLYDVIHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR-- 119
Query: 149 VRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAI-QG 207
R++HRDLK N+L++++ KI+DFG+AR G ++ T IV T Y +P+ +
Sbjct: 120 -RVLHRDLKPQNLLINREGELKIADFGLAR-AFGIPVRKYTHEIV-TLWYRAPDVLMGSK 176
Query: 208 IFSIKSDVFSFGVLLLKIVSG 228
+S D++S G + ++V+G
Sbjct: 177 KYSTTIDIWSVGCIFAEMVNG 197
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 99/200 (49%), Gaps = 27/200 (13%)
Query: 50 FSDANKLGEGGFGPVYKGVLK-NGDEIAVKRL------SGRSGQGLREL--------KNK 94
F K+GEG +G VYK K G+ +A+K++ G +RE+ N
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 95 LRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTRVRI------IEGIAQGLLYLHQYSR 148
++LL +++ L++E++ F +T + + + + QGL + H +
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 122
Query: 149 VRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQ-G 207
R++HRDLK N+L++ + K++DFG+AR G ++ T +V T Y +PE +
Sbjct: 123 -RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVV-TLWYRAPEILLGCK 179
Query: 208 IFSIKSDVFSFGVLLLKIVS 227
+S D++S G + ++V+
Sbjct: 180 YYSTAVDIWSLGCIFAEMVT 199
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 99/200 (49%), Gaps = 27/200 (13%)
Query: 50 FSDANKLGEGGFGPVYKGVLK-NGDEIAVKRL------SGRSGQGLREL--------KNK 94
F K+GEG +G VYK K G+ +A+K++ G +RE+ N
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 71
Query: 95 LRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTRVRI------IEGIAQGLLYLHQYSR 148
++LL +++ L++E++ F +T + + + + QGL + H +
Sbjct: 72 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 129
Query: 149 VRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQ-G 207
R++HRDLK N+L++ + K++DFG+AR G ++ T +V T Y +PE +
Sbjct: 130 -RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVV-TLWYRAPEILLGCK 186
Query: 208 IFSIKSDVFSFGVLLLKIVS 227
+S D++S G + ++V+
Sbjct: 187 YYSTAVDIWSLGCIFAEMVT 206
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 59/100 (59%), Gaps = 4/100 (4%)
Query: 131 RIIEGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTG 190
R + G++YLH + I HRD+K N+LLD+ N KISDFG+A + R N +
Sbjct: 108 RFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 164
Query: 191 RIVGTYRYMSPEYAIQGIFSIKS-DVFSFGVLLLKIVSGK 229
++ GT Y++PE + F + DV+S G++L +++G+
Sbjct: 165 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 100/244 (40%), Gaps = 45/244 (18%)
Query: 26 RSKKKEVDQLPLFSFSSVSTATNKFSDANK--------LGEGGFGPVYKGVLKNGD---- 73
R+ D P +SF+ +++ + + + LG G FG VY+G +
Sbjct: 1 RTSTIMTDYNPNYSFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPS 60
Query: 74 --EIAVKRLSGRSGQG-----LREL--------KNKLRLLGCCIDKDEKILIYEYMPNKS 118
++AVK L + L E +N +R +G + + ++ E M
Sbjct: 61 PLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGD 120
Query: 119 LDFFLFDWVTR------------VRIIEGIAQGLLYLHQYSRVRIIHRDLKVSNILL--- 163
L FL + R + + IA G YL + IHRD+ N LL
Sbjct: 121 LKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCP 177
Query: 164 DKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLL 223
KI DFG+AR G + ++M PE ++GIF+ K+D +SFGVLL
Sbjct: 178 GPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLW 237
Query: 224 KIVS 227
+I S
Sbjct: 238 EIFS 241
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 59/100 (59%), Gaps = 4/100 (4%)
Query: 131 RIIEGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTG 190
R + G++YLH + I HRD+K N+LLD+ N KISDFG+A + R N +
Sbjct: 108 RFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 164
Query: 191 RIVGTYRYMSPEYAIQGIFSIKS-DVFSFGVLLLKIVSGK 229
++ GT Y++PE + F + DV+S G++L +++G+
Sbjct: 165 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 100/244 (40%), Gaps = 45/244 (18%)
Query: 26 RSKKKEVDQLPLFSFSSVSTATNKFSDANK--------LGEGGFGPVYKGVLKNGD---- 73
R+ D P +SF+ +++ + + + LG G FG VY+G +
Sbjct: 1 RTSTIMTDYNPNYSFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPS 60
Query: 74 --EIAVKRLSGRSGQG-----LREL--------KNKLRLLGCCIDKDEKILIYEYMPNKS 118
++AVK L + L E +N +R +G + + ++ E M
Sbjct: 61 PLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGD 120
Query: 119 LDFFLFDWVTR------------VRIIEGIAQGLLYLHQYSRVRIIHRDLKVSNILL--- 163
L FL + R + + IA G YL + IHRD+ N LL
Sbjct: 121 LKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCP 177
Query: 164 DKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLL 223
KI DFG+AR G + ++M PE ++GIF+ K+D +SFGVLL
Sbjct: 178 GPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLW 237
Query: 224 KIVS 227
+I S
Sbjct: 238 EIFS 241
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 59/100 (59%), Gaps = 4/100 (4%)
Query: 131 RIIEGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTG 190
R + G++YLH + I HRD+K N+LLD+ N KISDFG+A + R N +
Sbjct: 109 RFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 165
Query: 191 RIVGTYRYMSPEYAIQGIFSIKS-DVFSFGVLLLKIVSGK 229
++ GT Y++PE + F + DV+S G++L +++G+
Sbjct: 166 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 59/100 (59%), Gaps = 4/100 (4%)
Query: 131 RIIEGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTG 190
R + G++YLH + I HRD+K N+LLD+ N KISDFG+A + R N +
Sbjct: 107 RFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 163
Query: 191 RIVGTYRYMSPEYAIQGIFSIKS-DVFSFGVLLLKIVSGK 229
++ GT Y++PE + F + DV+S G++L +++G+
Sbjct: 164 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 203
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 100/202 (49%), Gaps = 27/202 (13%)
Query: 50 FSDANKLGEGGFGPVYKGVLK-NGDEIAVKRL------SGRSGQGLREL--------KNK 94
F K+GEG +G VYK K G+ +A+K++ G +RE+ N
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 95 LRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTRVRI------IEGIAQGLLYLHQYSR 148
++LL +++ L++E++ DF +T + + + + QGL + H +
Sbjct: 67 VKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 124
Query: 149 VRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQ-G 207
R++HRDLK N+L++ + K++DFG+AR G ++ +V T Y +PE +
Sbjct: 125 -RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVV-TLWYRAPEILLGCK 181
Query: 208 IFSIKSDVFSFGVLLLKIVSGK 229
+S D++S G + ++V+ +
Sbjct: 182 YYSTAVDIWSLGCIFAEMVTRR 203
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 59/100 (59%), Gaps = 4/100 (4%)
Query: 131 RIIEGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTG 190
R + G++YLH + I HRD+K N+LLD+ N KISDFG+A + R N +
Sbjct: 108 RFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 164
Query: 191 RIVGTYRYMSPEYAIQGIFSIKS-DVFSFGVLLLKIVSGK 229
++ GT Y++PE + F + DV+S G++L +++G+
Sbjct: 165 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 59/100 (59%), Gaps = 4/100 (4%)
Query: 131 RIIEGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTG 190
R + G++YLH + I HRD+K N+LLD+ N KISDFG+A + R N +
Sbjct: 108 RFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 164
Query: 191 RIVGTYRYMSPEYAIQGIFSIKS-DVFSFGVLLLKIVSGK 229
++ GT Y++PE + F + DV+S G++L +++G+
Sbjct: 165 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 59/100 (59%), Gaps = 4/100 (4%)
Query: 131 RIIEGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTG 190
R + G++YLH + I HRD+K N+LLD+ N KISDFG+A + R N +
Sbjct: 108 RFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 164
Query: 191 RIVGTYRYMSPEYAIQGIFSIKS-DVFSFGVLLLKIVSGK 229
++ GT Y++PE + F + DV+S G++L +++G+
Sbjct: 165 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 100/202 (49%), Gaps = 27/202 (13%)
Query: 50 FSDANKLGEGGFGPVYKGVLK-NGDEIAVKRL------SGRSGQGLREL--------KNK 94
F K+GEG +G VYK K G+ +A+K++ G +RE+ N
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 95 LRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTRVRI------IEGIAQGLLYLHQYSR 148
++LL +++ L++E++ DF +T + + + + QGL + H +
Sbjct: 68 VKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 125
Query: 149 VRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQ-G 207
R++HRDLK N+L++ + K++DFG+AR G ++ +V T Y +PE +
Sbjct: 126 -RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVV-TLWYRAPEILLGCK 182
Query: 208 IFSIKSDVFSFGVLLLKIVSGK 229
+S D++S G + ++V+ +
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 100/244 (40%), Gaps = 45/244 (18%)
Query: 26 RSKKKEVDQLPLFSFSSVSTATNKFSDANK--------LGEGGFGPVYKGVLKNGD---- 73
R+ D P +SF+ +++ + + + LG G FG VY+G +
Sbjct: 7 RTSTIMTDYNPNYSFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPS 66
Query: 74 --EIAVKRLSGRSGQG-----LREL--------KNKLRLLGCCIDKDEKILIYEYMPNKS 118
++AVK L + L E +N +R +G + + ++ E M
Sbjct: 67 PLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGD 126
Query: 119 LDFFLFDWVTR------------VRIIEGIAQGLLYLHQYSRVRIIHRDLKVSNILL--- 163
L FL + R + + IA G YL + IHRD+ N LL
Sbjct: 127 LKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCP 183
Query: 164 DKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLL 223
KI DFG+AR G + ++M PE ++GIF+ K+D +SFGVLL
Sbjct: 184 GPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLW 243
Query: 224 KIVS 227
+I S
Sbjct: 244 EIFS 247
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 59/100 (59%), Gaps = 4/100 (4%)
Query: 131 RIIEGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTG 190
R + G++YLH + I HRD+K N+LLD+ N KISDFG+A + R N +
Sbjct: 109 RFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 165
Query: 191 RIVGTYRYMSPEYAIQGIFSIKS-DVFSFGVLLLKIVSGK 229
++ GT Y++PE + F + DV+S G++L +++G+
Sbjct: 166 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 59/100 (59%), Gaps = 4/100 (4%)
Query: 131 RIIEGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTG 190
R + G++YLH + I HRD+K N+LLD+ N KISDFG+A + R N +
Sbjct: 109 RFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 165
Query: 191 RIVGTYRYMSPEYAIQGIFSIKS-DVFSFGVLLLKIVSGK 229
++ GT Y++PE + F + DV+S G++L +++G+
Sbjct: 166 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 59/100 (59%), Gaps = 4/100 (4%)
Query: 131 RIIEGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTG 190
R + G++YLH + I HRD+K N+LLD+ N KISDFG+A + R N +
Sbjct: 109 RFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 165
Query: 191 RIVGTYRYMSPEYAIQGIFSIKS-DVFSFGVLLLKIVSGK 229
++ GT Y++PE + F + DV+S G++L +++G+
Sbjct: 166 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 59/100 (59%), Gaps = 4/100 (4%)
Query: 131 RIIEGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTG 190
R + G++YLH + I HRD+K N+LLD+ N KISDFG+A + R N +
Sbjct: 108 RFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 164
Query: 191 RIVGTYRYMSPEYAIQGIFSIKS-DVFSFGVLLLKIVSGK 229
++ GT Y++PE + F + DV+S G++L +++G+
Sbjct: 165 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 59/100 (59%), Gaps = 4/100 (4%)
Query: 131 RIIEGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTG 190
R + G++YLH + I HRD+K N+LLD+ N KISDFG+A + R N +
Sbjct: 109 RFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 165
Query: 191 RIVGTYRYMSPEYAIQGIFSIKS-DVFSFGVLLLKIVSGK 229
++ GT Y++PE + F + DV+S G++L +++G+
Sbjct: 166 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 59/100 (59%), Gaps = 4/100 (4%)
Query: 131 RIIEGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTG 190
R + G++YLH + I HRD+K N+LLD+ N KISDFG+A + R N +
Sbjct: 109 RFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 165
Query: 191 RIVGTYRYMSPEYAIQGIFSIKS-DVFSFGVLLLKIVSGK 229
++ GT Y++PE + F + DV+S G++L +++G+
Sbjct: 166 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 59/100 (59%), Gaps = 4/100 (4%)
Query: 131 RIIEGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTG 190
R + G++YLH + I HRD+K N+LLD+ N KISDFG+A + R N +
Sbjct: 108 RFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 164
Query: 191 RIVGTYRYMSPEYAIQGIFSIKS-DVFSFGVLLLKIVSGK 229
++ GT Y++PE + F + DV+S G++L +++G+
Sbjct: 165 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 59/100 (59%), Gaps = 4/100 (4%)
Query: 131 RIIEGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTG 190
R + G++YLH + I HRD+K N+LLD+ N KISDFG+A + R N +
Sbjct: 108 RFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 164
Query: 191 RIVGTYRYMSPEYAIQGIFSIKS-DVFSFGVLLLKIVSGK 229
++ GT Y++PE + F + DV+S G++L +++G+
Sbjct: 165 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 100/202 (49%), Gaps = 27/202 (13%)
Query: 50 FSDANKLGEGGFGPVYKGVLK-NGDEIAVKRL------SGRSGQGLREL--------KNK 94
F K+GEG +G VYK K G+ +A+K++ G +RE+ N
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 68
Query: 95 LRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTRVRI------IEGIAQGLLYLHQYSR 148
++LL +++ L++E++ F +T + + + + QGL + H +
Sbjct: 69 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 126
Query: 149 VRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQ-G 207
R++HRDLK N+L++ + K++DFG+AR G ++ T +V T Y +PE +
Sbjct: 127 -RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVV-TLWYRAPEILLGCK 183
Query: 208 IFSIKSDVFSFGVLLLKIVSGK 229
+S D++S G + ++V+ +
Sbjct: 184 YYSTAVDIWSLGCIFAEMVTRR 205
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 103/243 (42%), Gaps = 53/243 (21%)
Query: 33 DQLPL--------FSFSSVSTATNKFSDANKLGEGGFGPVYK----GVLKNGDE--IAVK 78
D+LPL + S ++ + LG G FG V + G+ K +AVK
Sbjct: 4 DELPLDEHCERLPYDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVK 63
Query: 79 RL-SGRSGQGLRELKNKLR-------------LLGCCIDKDEKILIY------------- 111
L G + R L ++L+ LLG C +++
Sbjct: 64 MLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 123
Query: 112 -----EYMPNKSL--DFFLFDWVTRVRIIEGIAQGLLYLHQYSRVRIIHRDLKVSNILLD 164
E++P K L DF + + +A+G+ +L + + IHRDL NILL
Sbjct: 124 RSKRNEFVPYKDLYKDFLTLEHLICYSF--QVAKGMEFL---ASRKXIHRDLAARNILLS 178
Query: 165 KDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLK 224
+ KI DFG+AR + G ++M+PE +++I+SDV+SFGVLL +
Sbjct: 179 EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE 238
Query: 225 IVS 227
I S
Sbjct: 239 IFS 241
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 101/201 (50%), Gaps = 27/201 (13%)
Query: 49 KFSDANKLGEGGFGPVYKGVLKNGDEIAVKRLS-GRSGQG-----------LRELK--NK 94
K+ K+GEG +G VYK G+ A+K++ + +G L+ELK N
Sbjct: 3 KYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNI 62
Query: 95 LRLLGCCIDKDEKILIYEYMPNKSLDFFL------FDWVTRVRIIEGIAQGLLYLHQYSR 148
++L K +L++E++ ++ L L + VT + + G+ Y H
Sbjct: 63 VKLYDVIHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR-- 119
Query: 149 VRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAI-QG 207
R++HRDLK N+L++++ KI+DFG+AR G ++ T +V T Y +P+ +
Sbjct: 120 -RVLHRDLKPQNLLINREGELKIADFGLAR-AFGIPVRKYTHEVV-TLWYRAPDVLMGSK 176
Query: 208 IFSIKSDVFSFGVLLLKIVSG 228
+S D++S G + ++V+G
Sbjct: 177 KYSTTIDIWSVGCIFAEMVNG 197
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 59/100 (59%), Gaps = 4/100 (4%)
Query: 131 RIIEGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTG 190
R + G++YLH + I HRD+K N+LLD+ N KISDFG+A + R N +
Sbjct: 109 RFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 165
Query: 191 RIVGTYRYMSPEYAIQGIFSIKS-DVFSFGVLLLKIVSGK 229
++ GT Y++PE + F + DV+S G++L +++G+
Sbjct: 166 KMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 59/100 (59%), Gaps = 4/100 (4%)
Query: 131 RIIEGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTG 190
R + G++YLH + I HRD+K N+LLD+ N KISDFG+A + R N +
Sbjct: 108 RFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 164
Query: 191 RIVGTYRYMSPEYAIQGIFSIKS-DVFSFGVLLLKIVSGK 229
++ GT Y++PE + F + DV+S G++L +++G+
Sbjct: 165 KMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 59/100 (59%), Gaps = 4/100 (4%)
Query: 131 RIIEGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTG 190
R + G++YLH + I HRD+K N+LLD+ N KISDFG+A + R N +
Sbjct: 108 RFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 164
Query: 191 RIVGTYRYMSPEYAIQGIFSIKS-DVFSFGVLLLKIVSGK 229
++ GT Y++PE + F + DV+S G++L +++G+
Sbjct: 165 KMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 106/229 (46%), Gaps = 38/229 (16%)
Query: 53 ANKLGEGGFGPVYKGVLK-NGDEIAVKRLSGRS-------GQGLRELKNK--------LR 96
+ LG G FG V G + G ++AVK L+ + G+ RE++N ++
Sbjct: 21 GDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIK 80
Query: 97 LLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTR---------VRIIEGIAQGLLYLHQYS 147
L + ++ EY+ L FD++ + R+ + I G+ Y H++
Sbjct: 81 LYQVISTPSDIFMVMEYVSGGEL----FDYICKNGRLDEKESRRLFQQILSGVDYCHRHM 136
Query: 148 RVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQG 207
++HRDLK N+LLD MN KI+DFG++ + E + G+ Y +PE
Sbjct: 137 ---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXS---CGSPNYAAPEVISGR 190
Query: 208 IFS-IKSDVFSFGVLLLKIVSGKKTTGFYRTYSFTLLGYISENIYEFPS 255
+++ + D++S GV+L ++ G T F + TL I + I+ P
Sbjct: 191 LYAGPEVDIWSSGVILYALLCG--TLPFDDDHVPTLFKKICDGIFYTPQ 237
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 59/100 (59%), Gaps = 4/100 (4%)
Query: 131 RIIEGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTG 190
R + G++YLH + I HRD+K N+LLD+ N KISDFG+A + R N +
Sbjct: 108 RFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 164
Query: 191 RIVGTYRYMSPEYAIQGIFSIKS-DVFSFGVLLLKIVSGK 229
++ GT Y++PE + F + DV+S G++L +++G+
Sbjct: 165 KMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 59/100 (59%), Gaps = 4/100 (4%)
Query: 131 RIIEGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTG 190
R + G++YLH + I HRD+K N+LLD+ N KISDFG+A + R N +
Sbjct: 108 RFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 164
Query: 191 RIVGTYRYMSPEYAIQGIFSIKS-DVFSFGVLLLKIVSGK 229
++ GT Y++PE + F + DV+S G++L +++G+
Sbjct: 165 KMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 101/201 (50%), Gaps = 27/201 (13%)
Query: 49 KFSDANKLGEGGFGPVYKGVLKNGDEIAVKRLS-GRSGQG-----------LRELK--NK 94
K+ K+GEG +G VYK G+ A+K++ + +G L+ELK N
Sbjct: 3 KYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNI 62
Query: 95 LRLLGCCIDKDEKILIYEYMPNKSLDFFL------FDWVTRVRIIEGIAQGLLYLHQYSR 148
++L K +L++E++ ++ L L + VT + + G+ Y H
Sbjct: 63 VKLYDVIHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR-- 119
Query: 149 VRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAI-QG 207
R++HRDLK N+L++++ KI+DFG+AR G ++ T +V T Y +P+ +
Sbjct: 120 -RVLHRDLKPQNLLINREGELKIADFGLAR-AFGIPVRKYTHEVV-TLWYRAPDVLMGSK 176
Query: 208 IFSIKSDVFSFGVLLLKIVSG 228
+S D++S G + ++V+G
Sbjct: 177 KYSTTIDIWSVGCIFAEMVNG 197
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 100/202 (49%), Gaps = 27/202 (13%)
Query: 50 FSDANKLGEGGFGPVYKGVLK-NGDEIAVKRL------SGRSGQGLREL--------KNK 94
F K+GEG +G VYK K G+ +A+K++ G +RE+ N
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 95 LRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTRVRI------IEGIAQGLLYLHQYSR 148
++LL +++ L++E++ F +T + + + + QGL + H +
Sbjct: 64 VKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 121
Query: 149 VRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQ-G 207
R++HRDLK N+L++ + K++DFG+AR G ++ T +V T Y +PE +
Sbjct: 122 -RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVV-TLWYRAPEILLGCK 178
Query: 208 IFSIKSDVFSFGVLLLKIVSGK 229
+S D++S G + ++V+ +
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 100/202 (49%), Gaps = 27/202 (13%)
Query: 50 FSDANKLGEGGFGPVYKGVLK-NGDEIAVKRL------SGRSGQGLREL--------KNK 94
F K+GEG +G VYK K G+ +A+K++ G +RE+ N
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 95 LRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTRVRI------IEGIAQGLLYLHQYSR 148
++LL +++ L++E++ F +T + + + + QGL + H +
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSH-- 122
Query: 149 VRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQ-G 207
R++HRDLK N+L++ + K++DFG+AR G ++ T +V T Y +PE +
Sbjct: 123 -RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVV-TLWYRAPEILLGCK 179
Query: 208 IFSIKSDVFSFGVLLLKIVSGK 229
+S D++S G + ++V+ +
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 105/245 (42%), Gaps = 53/245 (21%)
Query: 33 DQLPL--------FSFSSVSTATNKFSDANKLGEGGFGPVYK----GVLKNGD--EIAVK 78
D+LPL + S ++ LG G FG V + G+ K +AVK
Sbjct: 4 DELPLDEHCERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVK 63
Query: 79 RL-SGRSGQGLRELKNKLR-------------LLGCCIDKDEKILIY------------- 111
L G + R L ++L+ LLG C +++
Sbjct: 64 MLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 123
Query: 112 -----EYMPNKSLDFFLF-DWVTRVRIIE---GIAQGLLYLHQYSRVRIIHRDLKVSNIL 162
E++P K L+ D++T +I +A+G+ +L + + IHRDL NIL
Sbjct: 124 RSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNIL 180
Query: 163 LDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLL 222
L + KI DFG+AR + G ++M+PE +++I+SDV+SFGVLL
Sbjct: 181 LSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLL 240
Query: 223 LKIVS 227
+I S
Sbjct: 241 WEIFS 245
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 64/120 (53%), Gaps = 13/120 (10%)
Query: 138 QGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYR 197
QG+ YLH R+IHRDLK+ N+ L+ DM+ KI DFG+A + + T + GT
Sbjct: 153 QGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKT--LCGTPN 207
Query: 198 YMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGK---KTTGFYRTYSFTLLGYISENIYEFP 254
Y++PE + S + D++S G +L ++ GK +T+ TY I +N Y P
Sbjct: 208 YIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYI-----RIKKNEYSVP 262
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 99/193 (51%), Gaps = 33/193 (17%)
Query: 56 LGEGGFGPVYKGVLKNGDEIAVKRLSGRS--------GQGLRELK--NKLRLLGCCIDKD 105
+G+G FG V G + G+++AVK + + + +L+ N ++LLG +++
Sbjct: 20 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEK 78
Query: 106 EKI-LIYEYMPNKSLDFFLFDWVTRVRIIEG----------IAQGLLYLHQYSRVRIIHR 154
+ ++ EYM SL +L +R R + G + + + YL + +HR
Sbjct: 79 GGLYIVTEYMAKGSLVDYLR---SRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHR 132
Query: 155 DLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKSD 214
DL N+L+ +D K+SDFG+ + + +TG++ ++ +PE + FS KSD
Sbjct: 133 DLAARNVLVSEDNVAKVSDFGLTKEASSTQ---DTGKL--PVKWTAPEALREAAFSTKSD 187
Query: 215 VFSFGVLLLKIVS 227
V+SFG+LL +I S
Sbjct: 188 VWSFGILLWEIYS 200
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 65/112 (58%), Gaps = 9/112 (8%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARIC--RGNELQANTGRIV 193
I+QG+ YL + ++++HRDL NIL+ + KISDFG++R + ++ + GRI
Sbjct: 159 ISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRI- 214
Query: 194 GTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVS--GKKTTGFYRTYSFTLL 243
++M+ E I++ +SDV+SFGVLL +IV+ G G F LL
Sbjct: 215 -PVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLL 265
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 92/202 (45%), Gaps = 36/202 (17%)
Query: 59 GGFGPVYKGVLKNGDEIAVKRLSGRSGQGLR-----------ELKNKLRLLGC-----CI 102
G FG V+K L N + +AVK + Q + + +N L+ +G +
Sbjct: 35 GRFGCVWKAQLLN-EYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSV 93
Query: 103 DKDEKILIYEYMPNKSLDFFL----FDWVTRVRIIEGIAQGLLYLHQ-------YSRVRI 151
D D LI + SL FL W I E +A+GL YLH+ + I
Sbjct: 94 DVD-LWLITAFHEKGSLSDFLKANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAI 152
Query: 152 IHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSI 211
HRD+K N+LL ++ I+DFG+A + +T VGT RYM+PE ++G +
Sbjct: 153 SHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPE-VLEGAINF 211
Query: 212 KSDVF------SFGVLLLKIVS 227
+ D F + G++L ++ S
Sbjct: 212 QRDAFLRIDMYAMGLVLWELAS 233
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 104/247 (42%), Gaps = 65/247 (26%)
Query: 31 EVDQLPLFSFSSVSTATNKFSDANKLGEGGFGPVY--------KGVLKNGDEIAVKRLSG 82
E+ + P + F +K + LGEG FG V K K +AVK L
Sbjct: 23 ELPEDPKWEFPR-----DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD 77
Query: 83 RSGQ-GLREL-------------KNKLRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVT 128
+ + L +L KN + LLG C +I EY +L +L
Sbjct: 78 DATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL----- 132
Query: 129 RVRIIEG--------------------------IAQGLLYLHQYSRVRIIHRDLKVSNIL 162
R R G +A+G+ YL + + IHRDL N+L
Sbjct: 133 RARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVL 189
Query: 163 LDKDMNPKISDFGIARICRGNELQANT--GRIVGTYRYMSPEYAIQGIFSIKSDVFSFGV 220
+ ++ KI+DFG+AR + NT GR+ ++M+PE +++ +SDV+SFGV
Sbjct: 190 VTENNVMKIADFGLARDINNIDYYKNTTNGRL--PVKWMAPEALFDRVYTHQSDVWSFGV 247
Query: 221 LLLKIVS 227
L+ +I +
Sbjct: 248 LMWEIFT 254
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 97/233 (41%), Gaps = 37/233 (15%)
Query: 46 ATNKFSDANKLGEGGFGPVYKGVLKNGDEI-AVKRL-------SGRSGQGLRELK----- 92
A F LG+G FG VY K I A+K L +G Q RE++
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 93 ---NKLRLLGCCIDKDEKILIYEYMPNKSLDFFL-----FDWVTRVRIIEGIAQGLLYLH 144
N LRL G D LI EY P ++ L FD I +A L Y H
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 126
Query: 145 QYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYA 204
R+IHRD+K N+LL KI+DFG + C + T + GT Y+ PE
Sbjct: 127 S---KRVIHRDIKPENLLLGSAGELKIADFGWS--CHAPSSRRTT--LSGTLDYLPPEMI 179
Query: 205 IQGIFSIKSDVFSFGVLLLKIVSGK---KTTGFYRTY------SFTLLGYISE 248
+ K D++S GVL + + GK + + TY FT +++E
Sbjct: 180 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 232
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 65/112 (58%), Gaps = 9/112 (8%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNE--LQANTGRIV 193
I+QG+ YL + ++++HRDL NIL+ + KISDFG++R + ++ + GRI
Sbjct: 159 ISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRI- 214
Query: 194 GTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVS--GKKTTGFYRTYSFTLL 243
++M+ E I++ +SDV+SFGVLL +IV+ G G F LL
Sbjct: 215 -PVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLL 265
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 64/112 (57%), Gaps = 9/112 (8%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARIC--RGNELQANTGRIV 193
I+QG+ YL + S ++HRDL NIL+ + KISDFG++R + ++ + GRI
Sbjct: 159 ISQGMQYLAEMS---LVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRI- 214
Query: 194 GTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVS--GKKTTGFYRTYSFTLL 243
++M+ E I++ +SDV+SFGVLL +IV+ G G F LL
Sbjct: 215 -PVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLL 265
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 105/245 (42%), Gaps = 53/245 (21%)
Query: 33 DQLPL--------FSFSSVSTATNKFSDANKLGEGGFGPVYK----GVLKNGD--EIAVK 78
D+LPL + S ++ LG G FG V + G+ K +AVK
Sbjct: 6 DELPLDEHCERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVK 65
Query: 79 RL-SGRSGQGLRELKNKLR-------------LLGCCIDKDEKILIY------------- 111
L G + R L ++L+ LLG C +++
Sbjct: 66 MLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 125
Query: 112 -----EYMPNKSLDFFLF-DWVTRVRIIE---GIAQGLLYLHQYSRVRIIHRDLKVSNIL 162
E++P K L+ D++T +I +A+G+ +L + + IHRDL NIL
Sbjct: 126 RSKRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNIL 182
Query: 163 LDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLL 222
L + KI DFG+AR + G ++M+PE +++I+SDV+SFGVLL
Sbjct: 183 LSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLL 242
Query: 223 LKIVS 227
+I S
Sbjct: 243 WEIFS 247
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 105/245 (42%), Gaps = 53/245 (21%)
Query: 33 DQLPL--------FSFSSVSTATNKFSDANKLGEGGFGPVYK----GVLKNGD--EIAVK 78
D+LPL + S ++ LG G FG V + G+ K +AVK
Sbjct: 4 DELPLDEHCERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVK 63
Query: 79 RL-SGRSGQGLRELKNKLR-------------LLGCCIDKDEKILIY------------- 111
L G + R L ++L+ LLG C +++
Sbjct: 64 MLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 123
Query: 112 -----EYMPNKSLDFFLF-DWVTRVRIIE---GIAQGLLYLHQYSRVRIIHRDLKVSNIL 162
E++P K L+ D++T +I +A+G+ +L + + IHRDL NIL
Sbjct: 124 RSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNIL 180
Query: 163 LDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLL 222
L + KI DFG+AR + G ++M+PE +++I+SDV+SFGVLL
Sbjct: 181 LSEKNVVKICDFGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLL 240
Query: 223 LKIVS 227
+I S
Sbjct: 241 WEIFS 245
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 53/92 (57%), Gaps = 3/92 (3%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGT 195
+A+G+ +L + + IHRDL NILL + KI DFG+AR + G
Sbjct: 148 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP 204
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVS 227
++M+PE +++I+SDV+SFGVLL +I S
Sbjct: 205 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 101/222 (45%), Gaps = 44/222 (19%)
Query: 42 SVSTAT-NKFSDANKLGEGGFGPVYKGVLKN-GDEIAVKR----LSGRSGQ--------- 86
S+ T T + +LG GGFG V + + ++ G+++A+K+ LS ++ +
Sbjct: 8 SLPTQTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIM 67
Query: 87 ---------GLRELKNKLRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTRVRIIEG-- 135
RE+ + L+ L D +L EY L +L + + EG
Sbjct: 68 KKLNHPNVVSAREVPDGLQKLA---PNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPI 124
Query: 136 ------IAQGLLYLHQYSRVRIIHRDLKVSNILLD---KDMNPKISDFGIARICRGNELQ 186
I+ L YLH+ RIIHRDLK NI+L + + KI D G A+ EL
Sbjct: 125 RTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGEL- 180
Query: 187 ANTGRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
VGT +Y++PE Q +++ D +SFG L + ++G
Sbjct: 181 --CTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITG 220
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 107/243 (44%), Gaps = 49/243 (20%)
Query: 22 NLTKRSKKKEVDQLPLFSFSSVSTATNKFSDANKLGEGGFGPVYKGVLKNGDEIAVKRLS 81
++ S + +D++ L S++ F +G G +G VYKG ++A ++
Sbjct: 1 SMASDSPARSLDEIDL---SALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVM 57
Query: 82 GRSGQGLRELKNKLRLL-------------GCCIDK------DEKILIYEY--------- 113
+G E+K ++ +L G I K D+ L+ E+
Sbjct: 58 DVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDL 117
Query: 114 MPNKSLDFFLFDWVTRVRIIEGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISD 173
+ N + +W+ I I +GL +LHQ+ ++IHRD+K N+LL ++ K+ D
Sbjct: 118 IKNTKGNTLKEEWI--AYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVD 172
Query: 174 FGIARICRGNELQANTGR---IVGTYRYMSPEYAI-----QGIFSIKSDVFSFGVLLLKI 225
FG++ +L GR +GT +M+PE + KSD++S G+ +++
Sbjct: 173 FGVS-----AQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEM 227
Query: 226 VSG 228
G
Sbjct: 228 AEG 230
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 101/222 (45%), Gaps = 44/222 (19%)
Query: 42 SVSTAT-NKFSDANKLGEGGFGPVYKGVLKN-GDEIAVKR----LSGRSGQ--------- 86
S+ T T + +LG GGFG V + + ++ G+++A+K+ LS ++ +
Sbjct: 7 SLPTQTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIM 66
Query: 87 ---------GLRELKNKLRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTRVRIIEG-- 135
RE+ + L+ L D +L EY L +L + + EG
Sbjct: 67 KKLNHPNVVSAREVPDGLQKLA---PNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPI 123
Query: 136 ------IAQGLLYLHQYSRVRIIHRDLKVSNILLD---KDMNPKISDFGIARICRGNELQ 186
I+ L YLH+ RIIHRDLK NI+L + + KI D G A+ EL
Sbjct: 124 RTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGEL- 179
Query: 187 ANTGRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
VGT +Y++PE Q +++ D +SFG L + ++G
Sbjct: 180 --CTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITG 219
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 48/77 (62%), Gaps = 2/77 (2%)
Query: 151 IIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFS 210
++HRDLK +N+ LD N K+ DFG+ARI +E A VGT YMSPE + ++
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAK--EFVGTPYYMSPEQMNRMSYN 194
Query: 211 IKSDVFSFGVLLLKIVS 227
KSD++S G LL ++ +
Sbjct: 195 EKSDIWSLGCLLYELCA 211
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 53/92 (57%), Gaps = 3/92 (3%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGT 195
+A+G+ +L + + IHRDL NILL + KI DFG+AR + G
Sbjct: 148 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP 204
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVS 227
++M+PE +++I+SDV+SFGVLL +I S
Sbjct: 205 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 66/121 (54%), Gaps = 15/121 (12%)
Query: 138 QGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIA-RICRGNELQANTGRIVGTY 196
QG+ YLH R+IHRDLK+ N+ L+ DM+ KI DFG+A +I E + + + GT
Sbjct: 153 QGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKD---LCGTP 206
Query: 197 RYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGK---KTTGFYRTYSFTLLGYISENIYEF 253
Y++PE + S + D++S G +L ++ GK +T+ TY I +N Y
Sbjct: 207 NYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYI-----RIKKNEYSV 261
Query: 254 P 254
P
Sbjct: 262 P 262
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 86/206 (41%), Gaps = 37/206 (17%)
Query: 56 LGEGGFGPVYKGVLKNGD------EIAVKRLSGRSGQG-----LREL--------KNKLR 96
LG G FG VY+G + ++AVK L + L E +N +R
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 97 LLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTR------------VRIIEGIAQGLLYLH 144
+G + + ++ E M L FL + R + + IA G YL
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 145 QYSRVRIIHRDLKVSNILL---DKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSP 201
+ IHRD+ N LL KI DFG+AR G + ++M P
Sbjct: 173 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 202 EYAIQGIFSIKSDVFSFGVLLLKIVS 227
E ++GIF+ K+D +SFGVLL +I S
Sbjct: 230 EAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 105/245 (42%), Gaps = 53/245 (21%)
Query: 33 DQLPL--------FSFSSVSTATNKFSDANKLGEGGFGPVYK----GVLKNGD--EIAVK 78
D+LPL + S ++ LG G FG V + G+ K +AVK
Sbjct: 4 DELPLDEHCERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVK 63
Query: 79 RL-SGRSGQGLRELKNKLR-------------LLGCCIDKDEKILIY------------- 111
L G + R L ++L+ LLG C +++
Sbjct: 64 MLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 123
Query: 112 -----EYMPNKSLDFFLF-DWVTRVRIIE---GIAQGLLYLHQYSRVRIIHRDLKVSNIL 162
E++P K L+ D++T +I +A+G+ +L + + IHRDL NIL
Sbjct: 124 RSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNIL 180
Query: 163 LDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLL 222
L + KI DFG+AR + G ++M+PE +++I+SDV+SFGVLL
Sbjct: 181 LSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLL 240
Query: 223 LKIVS 227
+I S
Sbjct: 241 WEIFS 245
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 86/206 (41%), Gaps = 37/206 (17%)
Query: 56 LGEGGFGPVYKGVLKNGD------EIAVKRLSGRSGQG-----LREL--------KNKLR 96
LG G FG VY+G + ++AVK L + L E +N +R
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 97 LLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTR------------VRIIEGIAQGLLYLH 144
+G + + ++ E M L FL + R + + IA G YL
Sbjct: 98 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 145 QYSRVRIIHRDLKVSNILL---DKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSP 201
+ IHRD+ N LL KI DFG+AR G + ++M P
Sbjct: 158 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 214
Query: 202 EYAIQGIFSIKSDVFSFGVLLLKIVS 227
E ++GIF+ K+D +SFGVLL +I S
Sbjct: 215 EAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 48/77 (62%), Gaps = 2/77 (2%)
Query: 151 IIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFS 210
++HRDLK +N+ LD N K+ DFG+ARI + A T VGT YMSPE + ++
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKT--FVGTPYYMSPEQMNRMSYN 194
Query: 211 IKSDVFSFGVLLLKIVS 227
KSD++S G LL ++ +
Sbjct: 195 EKSDIWSLGCLLYELCA 211
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 100/243 (41%), Gaps = 43/243 (17%)
Query: 39 SFSSVSTATNKFSDANKLGEGGFGPVYKGVLKNGDEI-AVKRL-------SGRSGQGLRE 90
+ S A F LG+G FG VY K I A+K L +G Q RE
Sbjct: 2 AMGSRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 61
Query: 91 LK--------NKLRLLGCCIDKDEKILIYEYMPNKSLDFFL-----FDWVTRVRIIEGIA 137
++ N LRL G D LI EY P ++ L FD I +A
Sbjct: 62 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 121
Query: 138 QGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGR---IVG 194
L Y H R+IHRD+K N+LL KI+DFG + + A + R + G
Sbjct: 122 NALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRAALCG 171
Query: 195 TYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGK---KTTGFYRTY------SFTLLGY 245
T Y+ PE + K D++S GVL + + GK + + TY FT +
Sbjct: 172 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF 231
Query: 246 ISE 248
++E
Sbjct: 232 VTE 234
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 86/206 (41%), Gaps = 37/206 (17%)
Query: 56 LGEGGFGPVYKGVLKNGD------EIAVKRLSGRSGQG-----LREL--------KNKLR 96
LG G FG VY+G + ++AVK L + L E +N +R
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 97 LLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTR------------VRIIEGIAQGLLYLH 144
+G + + ++ E M L FL + R + + IA G YL
Sbjct: 98 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 145 QYSRVRIIHRDLKVSNILL---DKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSP 201
+ IHRD+ N LL KI DFG+AR G + ++M P
Sbjct: 158 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 214
Query: 202 EYAIQGIFSIKSDVFSFGVLLLKIVS 227
E ++GIF+ K+D +SFGVLL +I S
Sbjct: 215 EAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 66/121 (54%), Gaps = 15/121 (12%)
Query: 138 QGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIA-RICRGNELQANTGRIVGTY 196
QG+ YLH R+IHRDLK+ N+ L+ DM+ KI DFG+A +I E + + + GT
Sbjct: 137 QGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKD---LCGTP 190
Query: 197 RYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGK---KTTGFYRTYSFTLLGYISENIYEF 253
Y++PE + S + D++S G +L ++ GK +T+ TY I +N Y
Sbjct: 191 NYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYI-----RIKKNEYSV 245
Query: 254 P 254
P
Sbjct: 246 P 246
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 86/206 (41%), Gaps = 37/206 (17%)
Query: 56 LGEGGFGPVYKGVLKNGD------EIAVKRLSGRSGQG-----LREL--------KNKLR 96
LG G FG VY+G + ++AVK L + L E +N +R
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 97 LLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTR------------VRIIEGIAQGLLYLH 144
+G + + ++ E M L FL + R + + IA G YL
Sbjct: 115 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 174
Query: 145 QYSRVRIIHRDLKVSNILL---DKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSP 201
+ IHRD+ N LL KI DFG+AR G + ++M P
Sbjct: 175 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 231
Query: 202 EYAIQGIFSIKSDVFSFGVLLLKIVS 227
E ++GIF+ K+D +SFGVLL +I S
Sbjct: 232 EAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 96/236 (40%), Gaps = 43/236 (18%)
Query: 46 ATNKFSDANKLGEGGFGPVYKGVLKNGDEI-AVKRL-------SGRSGQGLRELK----- 92
A F LG+G FG VY K I A+K L +G Q RE++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 93 ---NKLRLLGCCIDKDEKILIYEYMPNKSL-----DFFLFDWVTRVRIIEGIAQGLLYLH 144
N LRL G D LI EY P + FD I +A L Y H
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCH 130
Query: 145 QYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGR---IVGTYRYMSP 201
R+IHRD+K N+LL KI+DFG + + A + R + GT Y+ P
Sbjct: 131 S---KRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTTLCGTLDYLPP 180
Query: 202 EYAIQGIFSIKSDVFSFGVLLLKIVSGK---KTTGFYRTY------SFTLLGYISE 248
E + K D++S GVL + + GK + + TY FT +++E
Sbjct: 181 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 236
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 86/206 (41%), Gaps = 37/206 (17%)
Query: 56 LGEGGFGPVYKGVLKNGD------EIAVKRLSGRSGQG-----LREL--------KNKLR 96
LG G FG VY+G + ++AVK L + L E +N +R
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 97 LLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTR------------VRIIEGIAQGLLYLH 144
+G + + ++ E M L FL + R + + IA G YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 145 QYSRVRIIHRDLKVSNILL---DKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSP 201
+ IHRD+ N LL KI DFG+AR G + ++M P
Sbjct: 173 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 202 EYAIQGIFSIKSDVFSFGVLLLKIVS 227
E ++GIF+ K+D +SFGVLL +I S
Sbjct: 230 EAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 98/236 (41%), Gaps = 43/236 (18%)
Query: 46 ATNKFSDANKLGEGGFGPVYKGVLKNGDEI-AVKRL-------SGRSGQGLRELK----- 92
A F LG+G FG VY K I A+K L +G Q RE++
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 93 ---NKLRLLGCCIDKDEKILIYEYMPNKSLDFFL-----FDWVTRVRIIEGIAQGLLYLH 144
N LRL G D LI EY P ++ L FD I +A L Y H
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 151
Query: 145 QYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGR---IVGTYRYMSP 201
R+IHRD+K N+LL KI+DFG + + A + R + GT Y+ P
Sbjct: 152 S---KRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTTLCGTLDYLPP 201
Query: 202 EYAIQGIFSIKSDVFSFGVLLLKIVSGK---KTTGFYRTY------SFTLLGYISE 248
E + K D++S GVL + + GK + + TY FT +++E
Sbjct: 202 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 257
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 60/93 (64%), Gaps = 5/93 (5%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGT 195
+A GL +LH + II+RDLK NILLD++ + K++DFG+++ +E +A + GT
Sbjct: 139 LALGLDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYS--FCGT 193
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
YM+PE + S +D +S+GVL+ ++++G
Sbjct: 194 VEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTG 226
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 105/245 (42%), Gaps = 53/245 (21%)
Query: 33 DQLPL--------FSFSSVSTATNKFSDANKLGEGGFGPVYK----GVLKNGD--EIAVK 78
D+LPL + S ++ LG G FG V + G+ K +AVK
Sbjct: 41 DELPLDEHCERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVK 100
Query: 79 RL-SGRSGQGLRELKNKLR-------------LLGCCIDKDEKILIY------------- 111
L G + R L ++L+ LLG C +++
Sbjct: 101 MLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 160
Query: 112 -----EYMPNKSLDFFLF-DWVTRVRIIE---GIAQGLLYLHQYSRVRIIHRDLKVSNIL 162
E++P K L+ D++T +I +A+G+ +L + + IHRDL NIL
Sbjct: 161 RSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNIL 217
Query: 163 LDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLL 222
L + KI DFG+AR + G ++M+PE +++I+SDV+SFGVLL
Sbjct: 218 LSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLL 277
Query: 223 LKIVS 227
+I S
Sbjct: 278 WEIFS 282
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 86/206 (41%), Gaps = 37/206 (17%)
Query: 56 LGEGGFGPVYKGVLKNGD------EIAVKRLSGRSGQG-----LREL--------KNKLR 96
LG G FG VY+G + ++AVK L + L E +N +R
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 97 LLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTR------------VRIIEGIAQGLLYLH 144
+G + + ++ E M L FL + R + + IA G YL
Sbjct: 90 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 149
Query: 145 QYSRVRIIHRDLKVSNILL---DKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSP 201
+ IHRD+ N LL KI DFG+AR G + ++M P
Sbjct: 150 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 206
Query: 202 EYAIQGIFSIKSDVFSFGVLLLKIVS 227
E ++GIF+ K+D +SFGVLL +I S
Sbjct: 207 EAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 96/202 (47%), Gaps = 36/202 (17%)
Query: 56 LGEGGFGPV----YKGVLKN-GDEIAVKRLSGRSG-QGLRELKNKLRLLG---------- 99
LGEG FG V Y N G+++AVK L SG + +LK ++ +L
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 100 ---CCIDKDEKI-LIYEYMPNKSLDFFL------FDWVTRVRIIEGIAQGLLYL--HQYS 147
C D I LI E++P+ SL +L + +++ I +G+ YL QY
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQY- 147
Query: 148 RVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNE--LQANTGRIVGTYRYMSPEYAI 205
+HRDL N+L++ + KI DFG+ + ++ R + Y +PE +
Sbjct: 148 ----VHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-APECLM 202
Query: 206 QGIFSIKSDVFSFGVLLLKIVS 227
Q F I SDV+SFGV L ++++
Sbjct: 203 QSKFYIASDVWSFGVTLHELLT 224
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 98/236 (41%), Gaps = 43/236 (18%)
Query: 46 ATNKFSDANKLGEGGFGPVYKGVLKNGDEI-AVKRL-------SGRSGQGLRELK----- 92
A F LG+G FG VY K I A+K L +G Q RE++
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 93 ---NKLRLLGCCIDKDEKILIYEYMPNKSLDFFL-----FDWVTRVRIIEGIAQGLLYLH 144
N LRL G D LI EY P ++ L FD I +A L Y H
Sbjct: 83 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 142
Query: 145 QYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGR---IVGTYRYMSP 201
R+IHRD+K N+LL KI+DFG + + A + R + GT Y+ P
Sbjct: 143 S---KRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTTLCGTLDYLPP 192
Query: 202 EYAIQGIFSIKSDVFSFGVLLLKIVSGK---KTTGFYRTY------SFTLLGYISE 248
E + K D++S GVL + + GK + + TY FT +++E
Sbjct: 193 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 248
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 96/236 (40%), Gaps = 43/236 (18%)
Query: 46 ATNKFSDANKLGEGGFGPVYKGVLKNGDEI-AVKRL-------SGRSGQGLRELK----- 92
A F LG+G FG VY K I A+K L +G Q RE++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 93 ---NKLRLLGCCIDKDEKILIYEYMPNKSL-----DFFLFDWVTRVRIIEGIAQGLLYLH 144
N LRL G D LI EY P + FD I +A L Y H
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCH 130
Query: 145 QYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGR---IVGTYRYMSP 201
R+IHRD+K N+LL KI+DFG + + A + R + GT Y+ P
Sbjct: 131 S---KRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRXXLXGTLDYLPP 180
Query: 202 EYAIQGIFSIKSDVFSFGVLLLKIVSGK---KTTGFYRTY------SFTLLGYISE 248
E + K D++S GVL + + GK + + TY FT +++E
Sbjct: 181 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 236
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 100/244 (40%), Gaps = 45/244 (18%)
Query: 26 RSKKKEVDQLPLFSFSSVSTATNKFSDANK--------LGEGGFGPVYKGVLKNGD---- 73
R+ D P +SF+ +++ + + + LG G FG VY+G +
Sbjct: 1 RTSTIMTDYNPNYSFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPS 60
Query: 74 --EIAVKRLSGRSGQG-----LREL--------KNKLRLLGCCIDKDEKILIYEYMPNKS 118
++AVK L + L E +N +R +G + + ++ E M
Sbjct: 61 PLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGD 120
Query: 119 LDFFLFDWVTR------------VRIIEGIAQGLLYLHQYSRVRIIHRDLKVSNILL--- 163
L FL + R + + IA G YL + IHRD+ N LL
Sbjct: 121 LKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCP 177
Query: 164 DKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLL 223
KI DFG+A+ G + ++M PE ++GIF+ K+D +SFGVLL
Sbjct: 178 GPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLW 237
Query: 224 KIVS 227
+I S
Sbjct: 238 EIFS 241
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 99/193 (51%), Gaps = 33/193 (17%)
Query: 56 LGEGGFGPVYKGVLKNGDEIAVKRLSGRS--------GQGLRELK--NKLRLLGCCIDKD 105
+G+G FG V G + G+++AVK + + + +L+ N ++LLG +++
Sbjct: 201 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEK 259
Query: 106 EKI-LIYEYMPNKSLDFFLFDWVTRVRIIEG----------IAQGLLYLHQYSRVRIIHR 154
+ ++ EYM SL +L +R R + G + + + YL + +HR
Sbjct: 260 GGLYIVTEYMAKGSLVDYL---RSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHR 313
Query: 155 DLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKSD 214
DL N+L+ +D K+SDFG+ + + +TG++ ++ +PE + FS KSD
Sbjct: 314 DLAARNVLVSEDNVAKVSDFGLTKEASSTQ---DTGKL--PVKWTAPEALREKKFSTKSD 368
Query: 215 VFSFGVLLLKIVS 227
V+SFG+LL +I S
Sbjct: 369 VWSFGILLWEIYS 381
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 99/202 (49%), Gaps = 27/202 (13%)
Query: 50 FSDANKLGEGGFGPVYKGVLK-NGDEIAVKRL------SGRSGQGLREL--------KNK 94
F K+GEG +G VYK K G+ +A+ ++ G +RE+ N
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 95 LRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTRVRI------IEGIAQGLLYLHQYSR 148
++LL +++ L++E++ F +T + + + + QGL + H +
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 122
Query: 149 VRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQ-G 207
R++HRDLK N+L++ + K++DFG+AR G ++ T +V T Y +PE +
Sbjct: 123 -RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVV-TLWYRAPEILLGCK 179
Query: 208 IFSIKSDVFSFGVLLLKIVSGK 229
+S D++S G + ++V+ +
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 99/202 (49%), Gaps = 27/202 (13%)
Query: 50 FSDANKLGEGGFGPVYKGVLK-NGDEIAVKRL------SGRSGQGLREL--------KNK 94
F K+GEG +G VYK K G+ +A+ ++ G +RE+ N
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 95 LRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTRVRI------IEGIAQGLLYLHQYSR 148
++LL +++ L++E++ F +T + + + + QGL + H +
Sbjct: 64 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 121
Query: 149 VRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQ-G 207
R++HRDLK N+L++ + K++DFG+AR G ++ T +V T Y +PE +
Sbjct: 122 -RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVV-TLWYRAPEILLGCK 178
Query: 208 IFSIKSDVFSFGVLLLKIVSGK 229
+S D++S G + ++V+ +
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 66/123 (53%), Gaps = 19/123 (15%)
Query: 138 QGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGR---IVG 194
QG+ YLH R+IHRDLK+ N+ L+ DM+ KI DFG+A +++ + R + G
Sbjct: 153 QGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLA-----TKIEFDGERKKXLCG 204
Query: 195 TYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGK---KTTGFYRTYSFTLLGYISENIY 251
T Y++PE + S + D++S G +L ++ GK +T+ TY I +N Y
Sbjct: 205 TPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYI-----RIKKNEY 259
Query: 252 EFP 254
P
Sbjct: 260 SVP 262
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 53/92 (57%), Gaps = 3/92 (3%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGT 195
+A+G+ +L + + IHRDL NILL + KI DFG+AR + G
Sbjct: 207 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 263
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVS 227
++M+PE +++I+SDV+SFGVLL +I S
Sbjct: 264 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 98/236 (41%), Gaps = 43/236 (18%)
Query: 46 ATNKFSDANKLGEGGFGPVYKGVLKNGDEI-AVKRL-------SGRSGQGLRELK----- 92
A F LG+G FG VY K I A+K L +G Q RE++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 93 ---NKLRLLGCCIDKDEKILIYEYMPNKSLDFFL-----FDWVTRVRIIEGIAQGLLYLH 144
N LRL G D LI EY P ++ L FD I +A L Y H
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 145 QYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGR---IVGTYRYMSP 201
R+IHRD+K N+LL KI+DFG + + A + R + GT Y+ P
Sbjct: 129 S---KRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTTLCGTLDYLPP 178
Query: 202 EYAIQGIFSIKSDVFSFGVLLLKIVSGK---KTTGFYRTY------SFTLLGYISE 248
E + K D++S GVL + + GK + + TY FT +++E
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 234
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 98/236 (41%), Gaps = 43/236 (18%)
Query: 46 ATNKFSDANKLGEGGFGPVYKGVLKNGDEI-AVKRL-------SGRSGQGLRELK----- 92
A F LG+G FG VY K I A+K L +G Q RE++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 93 ---NKLRLLGCCIDKDEKILIYEYMPNKSLDFFL-----FDWVTRVRIIEGIAQGLLYLH 144
N LRL G D LI EY P ++ L FD I +A L Y H
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 145 QYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGR---IVGTYRYMSP 201
R+IHRD+K N+LL KI+DFG + + A + R + GT Y+ P
Sbjct: 126 S---KRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTDLCGTLDYLPP 175
Query: 202 EYAIQGIFSIKSDVFSFGVLLLKIVSGK---KTTGFYRTY------SFTLLGYISE 248
E + K D++S GVL + + GK + + TY FT +++E
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 231
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 53/92 (57%), Gaps = 3/92 (3%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGT 195
+A+G+ +L + + IHRDL NILL + KI DFG+AR + G
Sbjct: 148 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 204
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVS 227
++M+PE +++I+SDV+SFGVLL +I S
Sbjct: 205 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 96/202 (47%), Gaps = 36/202 (17%)
Query: 56 LGEGGFGPV----YKGVLKN-GDEIAVKRLSGRSG-QGLRELKNKLRLLG---------- 99
LGEG FG V Y N G+++AVK L SG + +LK ++ +L
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 100 ---CCIDKDEKI-LIYEYMPNKSLDFFL------FDWVTRVRIIEGIAQGLLYL--HQYS 147
C D I LI E++P+ SL +L + +++ I +G+ YL QY
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQY- 135
Query: 148 RVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNE--LQANTGRIVGTYRYMSPEYAI 205
+HRDL N+L++ + KI DFG+ + ++ R + Y +PE +
Sbjct: 136 ----VHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-APECLM 190
Query: 206 QGIFSIKSDVFSFGVLLLKIVS 227
Q F I SDV+SFGV L ++++
Sbjct: 191 QSKFYIASDVWSFGVTLHELLT 212
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 53/92 (57%), Gaps = 3/92 (3%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGT 195
+A+G+ +L + + IHRDL NILL + KI DFG+AR + G
Sbjct: 209 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 265
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVS 227
++M+PE +++I+SDV+SFGVLL +I S
Sbjct: 266 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 99/202 (49%), Gaps = 27/202 (13%)
Query: 50 FSDANKLGEGGFGPVYKGVLK-NGDEIAVKRL------SGRSGQGLREL--------KNK 94
F K+GEG +G VYK K G+ +A+K++ G +RE+ N
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 95 LRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTRVRI------IEGIAQGLLYLHQYSR 148
++LL +++ L++E++ F +T + + + + QGL + H +
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 122
Query: 149 VRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQ-G 207
R++HRDLK N+L++ + K++DFG+AR G ++ +V T Y +PE +
Sbjct: 123 -RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVV-TLWYRAPEILLGCK 179
Query: 208 IFSIKSDVFSFGVLLLKIVSGK 229
+S D++S G + ++V+ +
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 53/92 (57%), Gaps = 3/92 (3%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGT 195
+A+G+ +L + + IHRDL NILL + KI DFG+AR + G
Sbjct: 200 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 256
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVS 227
++M+PE +++I+SDV+SFGVLL +I S
Sbjct: 257 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 53/92 (57%), Gaps = 3/92 (3%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGT 195
+A+G+ +L + + IHRDL NILL + KI DFG+AR + G
Sbjct: 148 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 204
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVS 227
++M+PE +++I+SDV+SFGVLL +I S
Sbjct: 205 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 86/206 (41%), Gaps = 37/206 (17%)
Query: 56 LGEGGFGPVYKGVLKNGD------EIAVKRLSGRSGQG-----LREL--------KNKLR 96
LG G FG VY+G + ++AVK L + L E +N +R
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 97 LLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTR------------VRIIEGIAQGLLYLH 144
+G + + ++ E M L FL + R + + IA G YL
Sbjct: 139 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 198
Query: 145 QYSRVRIIHRDLKVSNILL---DKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSP 201
+ IHRD+ N LL KI DFG+AR G + ++M P
Sbjct: 199 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPP 255
Query: 202 EYAIQGIFSIKSDVFSFGVLLLKIVS 227
E ++GIF+ K+D +SFGVLL +I S
Sbjct: 256 EAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 99/202 (49%), Gaps = 27/202 (13%)
Query: 50 FSDANKLGEGGFGPVYKGVLK-NGDEIAVKRL------SGRSGQGLREL--------KNK 94
F K+GEG +G VYK K G+ +A+K++ G +RE+ N
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 95 LRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTRVRI------IEGIAQGLLYLHQYSR 148
++LL +++ L++E++ F +T + + + + QGL + H +
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 122
Query: 149 VRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQ-G 207
R++HRDLK N+L++ + K++DFG+AR G ++ +V T Y +PE +
Sbjct: 123 -RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVV-TLWYRAPEILLGCK 179
Query: 208 IFSIKSDVFSFGVLLLKIVSGK 229
+S D++S G + ++V+ +
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 53/92 (57%), Gaps = 3/92 (3%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGT 195
+A+G+ +L + + IHRDL NILL + KI DFG+AR + G
Sbjct: 202 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 258
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVS 227
++M+PE +++I+SDV+SFGVLL +I S
Sbjct: 259 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 99/193 (51%), Gaps = 33/193 (17%)
Query: 56 LGEGGFGPVYKGVLKNGDEIAVKRLSGRS--------GQGLRELK--NKLRLLGCCIDKD 105
+G+G FG V G + G+++AVK + + + +L+ N ++LLG +++
Sbjct: 14 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEK 72
Query: 106 EKI-LIYEYMPNKSLDFFLFDWVTRVRIIEG----------IAQGLLYLHQYSRVRIIHR 154
+ ++ EYM SL +L +R R + G + + + YL + +HR
Sbjct: 73 GGLYIVTEYMAKGSLVDYLR---SRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHR 126
Query: 155 DLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKSD 214
DL N+L+ +D K+SDFG+ + + +TG++ ++ +PE + FS KSD
Sbjct: 127 DLAARNVLVSEDNVAKVSDFGLTKEASSTQ---DTGKL--PVKWTAPEALREKKFSTKSD 181
Query: 215 VFSFGVLLLKIVS 227
V+SFG+LL +I S
Sbjct: 182 VWSFGILLWEIYS 194
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 98/236 (41%), Gaps = 43/236 (18%)
Query: 46 ATNKFSDANKLGEGGFGPVYKGVLKNGDEI-AVKRL-------SGRSGQGLRELK----- 92
A F LG+G FG VY K I A+K L +G Q RE++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 93 ---NKLRLLGCCIDKDEKILIYEYMPNKSLDFFL-----FDWVTRVRIIEGIAQGLLYLH 144
N LRL G D LI EY P ++ L FD I +A L Y H
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 145 QYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGR---IVGTYRYMSP 201
R+IHRD+K N+LL KI+DFG + + A + R + GT Y+ P
Sbjct: 126 S---KRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTTLCGTLDYLPP 175
Query: 202 EYAIQGIFSIKSDVFSFGVLLLKIVSGK---KTTGFYRTY------SFTLLGYISE 248
E + K D++S GVL + + GK + + TY FT +++E
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 231
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 98/236 (41%), Gaps = 43/236 (18%)
Query: 46 ATNKFSDANKLGEGGFGPVYKGVLKNGDEI-AVKRL-------SGRSGQGLRELK----- 92
A F LG+G FG VY K I A+K L +G Q RE++
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 93 ---NKLRLLGCCIDKDEKILIYEYMPNKSLDFFL-----FDWVTRVRIIEGIAQGLLYLH 144
N LRL G D LI EY P ++ L FD I +A L Y H
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 126
Query: 145 QYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGR---IVGTYRYMSP 201
R+IHRD+K N+LL KI+DFG + + A + R + GT Y+ P
Sbjct: 127 S---KRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRDTLCGTLDYLPP 176
Query: 202 EYAIQGIFSIKSDVFSFGVLLLKIVSGK---KTTGFYRTY------SFTLLGYISE 248
E + K D++S GVL + + GK + + TY FT +++E
Sbjct: 177 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 232
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 98/236 (41%), Gaps = 43/236 (18%)
Query: 46 ATNKFSDANKLGEGGFGPVYKGVLKNGDEI-AVKRL-------SGRSGQGLRELK----- 92
A F LG+G FG VY K I A+K L +G Q RE++
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 93 ---NKLRLLGCCIDKDEKILIYEYMPNKSLDFFL-----FDWVTRVRIIEGIAQGLLYLH 144
N LRL G D LI EY P ++ L FD I +A L Y H
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 126
Query: 145 QYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGR---IVGTYRYMSP 201
R+IHRD+K N+LL KI+DFG + + A + R + GT Y+ P
Sbjct: 127 S---KRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTDLCGTLDYLPP 176
Query: 202 EYAIQGIFSIKSDVFSFGVLLLKIVSGK---KTTGFYRTY------SFTLLGYISE 248
E + K D++S GVL + + GK + + TY FT +++E
Sbjct: 177 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 232
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 98/200 (49%), Gaps = 27/200 (13%)
Query: 50 FSDANKLGEGGFGPVYKGVLK-NGDEIAVKRL------SGRSGQGLREL--------KNK 94
F K+GEG +G VYK K G+ +A+K++ G +RE+ N
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 95 LRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTRVRI------IEGIAQGLLYLHQYSR 148
++LL +++ L++E++ F +T + + + + QGL + H +
Sbjct: 68 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 125
Query: 149 VRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQ-G 207
R++HRDLK N+L++ + K++DFG+AR G ++ +V T Y +PE +
Sbjct: 126 -RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVV-TLWYRAPEILLGCK 182
Query: 208 IFSIKSDVFSFGVLLLKIVS 227
+S D++S G + ++V+
Sbjct: 183 YYSTAVDIWSLGCIFAEMVT 202
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 98/200 (49%), Gaps = 27/200 (13%)
Query: 50 FSDANKLGEGGFGPVYKGVLK-NGDEIAVKRL------SGRSGQGLREL--------KNK 94
F K+GEG +G VYK K G+ +A+K++ G +RE+ N
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 95 LRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTRVRI------IEGIAQGLLYLHQYSR 148
++LL +++ L++E++ F +T + + + + QGL + H +
Sbjct: 67 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 124
Query: 149 VRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQ-G 207
R++HRDLK N+L++ + K++DFG+AR G ++ +V T Y +PE +
Sbjct: 125 -RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVV-TLWYRAPEILLGCK 181
Query: 208 IFSIKSDVFSFGVLLLKIVS 227
+S D++S G + ++V+
Sbjct: 182 YYSTAVDIWSLGCIFAEMVT 201
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 99/202 (49%), Gaps = 27/202 (13%)
Query: 50 FSDANKLGEGGFGPVYKGVLK-NGDEIAVKRL------SGRSGQGLREL--------KNK 94
F K+GEG +G VYK K G+ +A+K++ G +RE+ N
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 95 LRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTRVRI------IEGIAQGLLYLHQYSR 148
++LL +++ L++E++ F +T + + + + QGL + H +
Sbjct: 64 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 121
Query: 149 VRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQ-G 207
R++HRDLK N+L++ + K++DFG+AR G ++ +V T Y +PE +
Sbjct: 122 -RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVV-TLWYRAPEILLGCK 178
Query: 208 IFSIKSDVFSFGVLLLKIVSGK 229
+S D++S G + ++V+ +
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 102/233 (43%), Gaps = 40/233 (17%)
Query: 59 GGFGPVYKGVLKNGDEIAVKRL---SGRSGQGLRE------LKNKLRLLGCCIDKD---- 105
G FG V+K L N D +AVK +S Q RE +K++ L +K
Sbjct: 26 GRFGCVWKAQLMN-DFVAVKIFPLQDKQSWQSEREIFSTPGMKHENLLQFIAAEKRGSNL 84
Query: 106 --EKILIYEYMPNKSLDFFL----FDWVTRVRIIEGIAQGLLYLHQ--------YSRVRI 151
E LI + SL +L W + E +++GL YLH+ + I
Sbjct: 85 EVELWLITAFHDKGSLTDYLKGNIITWNELCHVAETMSRGLSYLHEDVPWCRGEGHKPSI 144
Query: 152 IHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSI 211
HRD K N+LL D+ ++DFG+A + +T VGT RYM+PE ++G +
Sbjct: 145 AHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPE-VLEGAINF 203
Query: 212 KSDVF------SFGVLLLKIVS-GKKTTGFYRTYSFTLLGYISENIYEFPSVD 257
+ D F + G++L ++VS K G Y E I + PS++
Sbjct: 204 QRDAFLRIDMYAMGLVLWELVSRCKAADGPVDEYMLPF----EEEIGQHPSLE 252
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 98/236 (41%), Gaps = 43/236 (18%)
Query: 46 ATNKFSDANKLGEGGFGPVYKGVLKNGDEI-AVKRL-------SGRSGQGLRELK----- 92
A F LG+G FG VY K I A+K L +G Q RE++
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 93 ---NKLRLLGCCIDKDEKILIYEYMPNKSLDFFL-----FDWVTRVRIIEGIAQGLLYLH 144
N LRL G D LI EY P ++ L FD I +A L Y H
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 151
Query: 145 QYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGR---IVGTYRYMSP 201
R+IHRD+K N+LL KI+DFG + + A + R + GT Y+ P
Sbjct: 152 S---KRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRDDLCGTLDYLPP 201
Query: 202 EYAIQGIFSIKSDVFSFGVLLLKIVSGK---KTTGFYRTY------SFTLLGYISE 248
E + K D++S GVL + + GK + + TY FT +++E
Sbjct: 202 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 257
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 98/236 (41%), Gaps = 43/236 (18%)
Query: 46 ATNKFSDANKLGEGGFGPVYKGVLKNGDEI-AVKRL-------SGRSGQGLRELK----- 92
A F LG+G FG VY K I A+K L +G Q RE++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 93 ---NKLRLLGCCIDKDEKILIYEYMPNKSLDFFL-----FDWVTRVRIIEGIAQGLLYLH 144
N LRL G D LI EY P ++ L FD I +A L Y H
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 145 QYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGR---IVGTYRYMSP 201
R+IHRD+K N+LL KI+DFG + + A + R + GT Y+ P
Sbjct: 126 S---KRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTELCGTLDYLPP 175
Query: 202 EYAIQGIFSIKSDVFSFGVLLLKIVSGK---KTTGFYRTY------SFTLLGYISE 248
E + K D++S GVL + + GK + + TY FT +++E
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 231
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 98/200 (49%), Gaps = 27/200 (13%)
Query: 50 FSDANKLGEGGFGPVYKGVLK-NGDEIAVKRL------SGRSGQGLREL--------KNK 94
F K+GEG +G VYK K G+ +A+K++ G +RE+ N
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 95 LRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTRVRI------IEGIAQGLLYLHQYSR 148
++LL +++ L++E++ F +T + + + + QGL + H +
Sbjct: 66 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 123
Query: 149 VRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQ-G 207
R++HRDLK N+L++ + K++DFG+AR G ++ +V T Y +PE +
Sbjct: 124 -RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVV-TLWYRAPEILLGCK 180
Query: 208 IFSIKSDVFSFGVLLLKIVS 227
+S D++S G + ++V+
Sbjct: 181 YYSTAVDIWSLGCIFAEMVT 200
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 99/202 (49%), Gaps = 27/202 (13%)
Query: 50 FSDANKLGEGGFGPVYKGVLK-NGDEIAVKRL------SGRSGQGLREL--------KNK 94
F K+GEG +G VYK K G+ +A+K++ G +RE+ N
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 95 LRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTRVRI------IEGIAQGLLYLHQYSR 148
++LL +++ L++E++ F +T + + + + QGL + H +
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 122
Query: 149 VRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQ-G 207
R++HRDLK N+L++ + K++DFG+AR G ++ +V T Y +PE +
Sbjct: 123 -RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVV-TLWYRAPEILLGCK 179
Query: 208 IFSIKSDVFSFGVLLLKIVSGK 229
+S D++S G + ++V+ +
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 99/202 (49%), Gaps = 27/202 (13%)
Query: 50 FSDANKLGEGGFGPVYKGVLK-NGDEIAVKRL------SGRSGQGLREL--------KNK 94
F K+GEG +G VYK K G+ +A+K++ G +RE+ N
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 95 LRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTRVRI------IEGIAQGLLYLHQYSR 148
++LL +++ L++E++ F +T + + + + QGL + H +
Sbjct: 64 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 121
Query: 149 VRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQ-G 207
R++HRDLK N+L++ + K++DFG+AR G ++ +V T Y +PE +
Sbjct: 122 -RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVV-TLWYRAPEILLGCK 178
Query: 208 IFSIKSDVFSFGVLLLKIVSGK 229
+S D++S G + ++V+ +
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 98/236 (41%), Gaps = 43/236 (18%)
Query: 46 ATNKFSDANKLGEGGFGPVYKGVLKNGDEI-AVKRL-------SGRSGQGLRELK----- 92
A F LG+G FG VY K I A+K L +G Q RE++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 93 ---NKLRLLGCCIDKDEKILIYEYMPNKSLDFFL-----FDWVTRVRIIEGIAQGLLYLH 144
N LRL G D LI EY P ++ L FD I +A L Y H
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 130
Query: 145 QYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGR---IVGTYRYMSP 201
R+IHRD+K N+LL KI+DFG + + A + R + GT Y+ P
Sbjct: 131 S---KRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTTLCGTLDYLPP 180
Query: 202 EYAIQGIFSIKSDVFSFGVLLLKIVSGK---KTTGFYRTY------SFTLLGYISE 248
E + K D++S GVL + + GK + + TY FT +++E
Sbjct: 181 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 236
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 98/236 (41%), Gaps = 43/236 (18%)
Query: 46 ATNKFSDANKLGEGGFGPVYKGVLKNGDEI-AVKRL-------SGRSGQGLRELK----- 92
A F LG+G FG VY K I A+K L +G Q RE++
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 93 ---NKLRLLGCCIDKDEKILIYEYMPNKSLDFFL-----FDWVTRVRIIEGIAQGLLYLH 144
N LRL G D LI EY P ++ L FD I +A L Y H
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 127
Query: 145 QYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGR---IVGTYRYMSP 201
R+IHRD+K N+LL KI+DFG + + A + R + GT Y+ P
Sbjct: 128 S---KRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRXXLCGTLDYLPP 177
Query: 202 EYAIQGIFSIKSDVFSFGVLLLKIVSGK---KTTGFYRTY------SFTLLGYISE 248
E + K D++S GVL + + GK + + TY FT +++E
Sbjct: 178 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 233
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 98/200 (49%), Gaps = 27/200 (13%)
Query: 50 FSDANKLGEGGFGPVYKGVLK-NGDEIAVKRL------SGRSGQGLREL--------KNK 94
F K+GEG +G VYK K G+ +A+K++ G +RE+ N
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 95 LRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTRVRI------IEGIAQGLLYLHQYSR 148
++LL +++ L++E++ F +T + + + + QGL + H +
Sbjct: 67 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 124
Query: 149 VRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQ-G 207
R++HRDLK N+L++ + K++DFG+AR G ++ +V T Y +PE +
Sbjct: 125 -RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVV-TLWYRAPEILLGCK 181
Query: 208 IFSIKSDVFSFGVLLLKIVS 227
+S D++S G + ++V+
Sbjct: 182 YYSTAVDIWSLGCIFAEMVT 201
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 89/208 (42%), Gaps = 34/208 (16%)
Query: 46 ATNKFSDANKLGEGGFGPVYKGVLKNGDEI-AVKRL-------SGRSGQGLRELK----- 92
A F LG+G FG VY KN I A+K L +G Q RE++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 93 ---NKLRLLGCCIDKDEKILIYEYMPNKSLDFFL-----FDWVTRVRIIEGIAQGLLYLH 144
N LRL G D LI EY P ++ L FD I +A L Y H
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 145 QYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGR---IVGTYRYMSP 201
++IHRD+K N+LL KI+DFG + + A + R + GT Y+ P
Sbjct: 126 S---KKVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRAALCGTLDYLPP 175
Query: 202 EYAIQGIFSIKSDVFSFGVLLLKIVSGK 229
E + K D++S GVL + + GK
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 99/193 (51%), Gaps = 33/193 (17%)
Query: 56 LGEGGFGPVYKGVLKNGDEIAVKRLSGRS--------GQGLRELK--NKLRLLGCCIDKD 105
+G+G FG V G + G+++AVK + + + +L+ N ++LLG +++
Sbjct: 29 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEK 87
Query: 106 EKI-LIYEYMPNKSLDFFLFDWVTRVRIIEG----------IAQGLLYLHQYSRVRIIHR 154
+ ++ EYM SL +L +R R + G + + + YL + +HR
Sbjct: 88 GGLYIVTEYMAKGSLVDYL---RSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHR 141
Query: 155 DLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKSD 214
DL N+L+ +D K+SDFG+ + + +TG++ ++ +PE + FS KSD
Sbjct: 142 DLAARNVLVSEDNVAKVSDFGLTKEASSTQ---DTGKL--PVKWTAPEALREKKFSTKSD 196
Query: 215 VFSFGVLLLKIVS 227
V+SFG+LL +I S
Sbjct: 197 VWSFGILLWEIYS 209
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 98/200 (49%), Gaps = 27/200 (13%)
Query: 50 FSDANKLGEGGFGPVYKGVLK-NGDEIAVKRL------SGRSGQGLREL--------KNK 94
F K+GEG +G VYK K G+ +A+K++ G +RE+ N
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 95 LRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTRVRI------IEGIAQGLLYLHQYSR 148
++LL +++ L++E++ F +T + + + + QGL + H +
Sbjct: 66 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 123
Query: 149 VRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQ-G 207
R++HRDLK N+L++ + K++DFG+AR G ++ +V T Y +PE +
Sbjct: 124 -RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVV-TLWYRAPEILLGCK 180
Query: 208 IFSIKSDVFSFGVLLLKIVS 227
+S D++S G + ++V+
Sbjct: 181 YYSTAVDIWSLGCIFAEMVT 200
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 98/236 (41%), Gaps = 43/236 (18%)
Query: 46 ATNKFSDANKLGEGGFGPVYKGVLKNGDEI-AVKRL-------SGRSGQGLRELK----- 92
A F LG+G FG VY K I A+K L +G Q RE++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 93 ---NKLRLLGCCIDKDEKILIYEYMPNKSLDFFL-----FDWVTRVRIIEGIAQGLLYLH 144
N LRL G D LI EY P ++ L FD I +A L Y H
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 130
Query: 145 QYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGR---IVGTYRYMSP 201
R+IHRD+K N+LL KI+DFG + + A + R + GT Y+ P
Sbjct: 131 S---KRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTDLCGTLDYLPP 180
Query: 202 EYAIQGIFSIKSDVFSFGVLLLKIVSGK---KTTGFYRTY------SFTLLGYISE 248
E + K D++S GVL + + GK + + TY FT +++E
Sbjct: 181 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 236
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 98/236 (41%), Gaps = 43/236 (18%)
Query: 46 ATNKFSDANKLGEGGFGPVYKGVLKNGDEI-AVKRL-------SGRSGQGLRELK----- 92
A F LG+G FG VY K I A+K L +G Q RE++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 93 ---NKLRLLGCCIDKDEKILIYEYMPNKSLDFFL-----FDWVTRVRIIEGIAQGLLYLH 144
N LRL G D LI EY P ++ L FD I +A L Y H
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 145 QYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGR---IVGTYRYMSP 201
R+IHRD+K N+LL KI+DFG + + A + R + GT Y+ P
Sbjct: 126 S---KRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTDLCGTLDYLPP 175
Query: 202 EYAIQGIFSIKSDVFSFGVLLLKIVSGK---KTTGFYRTY------SFTLLGYISE 248
E + K D++S GVL + + GK + + TY FT +++E
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 231
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 98/200 (49%), Gaps = 27/200 (13%)
Query: 50 FSDANKLGEGGFGPVYKGVLK-NGDEIAVKRL------SGRSGQGLREL--------KNK 94
F K+GEG +G VYK K G+ +A+K++ G +RE+ N
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 95 LRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTRVRI------IEGIAQGLLYLHQYSR 148
++LL +++ L++E++ F +T + + + + QGL + H +
Sbjct: 67 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 124
Query: 149 VRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQ-G 207
R++HRDLK N+L++ + K++DFG+AR G ++ +V T Y +PE +
Sbjct: 125 -RVLHRDLKPENLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVV-TLWYRAPEILLGCK 181
Query: 208 IFSIKSDVFSFGVLLLKIVS 227
+S D++S G + ++V+
Sbjct: 182 YYSTAVDIWSLGCIFAEMVT 201
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 113/244 (46%), Gaps = 39/244 (15%)
Query: 55 KLGEGGFGPVYKGVLKN-GDEIAVKRLSGRSGQGLREL-------------KNKLRLLGC 100
K+GEG G V K+ G ++AVK++ R Q REL N + +
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQR-RELLFNEVVIMRDYHHDNVVDMYSS 110
Query: 101 CIDKDEKILIYEYMPNKSLDFFLFDWVTRVRIIE--------GIAQGLLYLHQYSRVRII 152
+ DE ++ E++ +L D VT R+ E + + L YLH +I
Sbjct: 111 YLVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIATVCLSVLRALSYLHNQG---VI 163
Query: 153 HRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIK 212
HRD+K +ILL D K+SDFG + ++ +VGT +M+PE + + +
Sbjct: 164 HRDIKSDSILLTSDGRIKLSDFGFC--AQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTE 221
Query: 213 SDVFSFGVLLLKIVSGKKTTGFYRTYSFTLLGYISENIYEFPSV-DTHNVKTF--GFLHL 269
D++S G+++++++ G+ ++ + I +++ P V D H V + GFL L
Sbjct: 222 VDIWSLGIMVIEMIDGEPP--YFNEPPLQAMRRIRDSLP--PRVKDLHKVSSVLRGFLDL 277
Query: 270 TIFK 273
+ +
Sbjct: 278 MLVR 281
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 90/197 (45%), Gaps = 29/197 (14%)
Query: 55 KLGEGGFGPVYKGV--------------LKNGDEIAVKRLSGRSGQGLRELKNK--LRLL 98
+LG G FG V +GV LK G E A R Q + +L N +RL+
Sbjct: 17 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 76
Query: 99 GCCIDKDEKILIYEYMPNKSLDFFLFDWVTRV------RIIEGIAQGLLYLHQYSRVRII 152
G C + +L+ E L FL + ++ ++ G+ YL + + +
Sbjct: 77 GVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKN---FV 132
Query: 153 HRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTY--RYMSPEYAIQGIFS 210
HRDL N+LL KISDFG+++ G + T R G + ++ +PE FS
Sbjct: 133 HRDLAARNVLLVNRHYAKISDFGLSKAL-GADDSYYTARSAGKWPLKWYAPECINFRKFS 191
Query: 211 IKSDVFSFGVLLLKIVS 227
+SDV+S+GV + + +S
Sbjct: 192 SRSDVWSYGVTMWEALS 208
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 99/202 (49%), Gaps = 27/202 (13%)
Query: 50 FSDANKLGEGGFGPVYKGVLK-NGDEIAVKRL------SGRSGQGLREL--------KNK 94
F K+GEG +G VYK K G+ +A+K++ G +RE+ N
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 95 LRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTRVRI------IEGIAQGLLYLHQYSR 148
++LL +++ L++E++ F +T + + + + QGL + H +
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 122
Query: 149 VRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQ-G 207
R++HRDLK N+L++ + K++DFG+AR G ++ +V T Y +PE +
Sbjct: 123 -RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVV-TLWYRAPEILLGCK 179
Query: 208 IFSIKSDVFSFGVLLLKIVSGK 229
+S D++S G + ++V+ +
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 98/200 (49%), Gaps = 27/200 (13%)
Query: 50 FSDANKLGEGGFGPVYKGVLK-NGDEIAVKRL------SGRSGQGLREL--------KNK 94
F K+GEG +G VYK K G+ +A+K++ G +RE+ N
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 95 LRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTRVRI------IEGIAQGLLYLHQYSR 148
++LL +++ L++E++ F +T + + + + QGL + H +
Sbjct: 66 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 123
Query: 149 VRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQ-G 207
R++HRDLK N+L++ + K++DFG+AR G ++ +V T Y +PE +
Sbjct: 124 -RVLHRDLKPENLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVV-TLWYRAPEILLGCK 180
Query: 208 IFSIKSDVFSFGVLLLKIVS 227
+S D++S G + ++V+
Sbjct: 181 YYSTAVDIWSLGCIFAEMVT 200
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 62/112 (55%), Gaps = 9/112 (8%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANT--GRIV 193
+A+G+ YL + + IHRDL N+L+ +D KI+DFG+AR + T GR+
Sbjct: 159 VARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNGRL- 214
Query: 194 GTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKI--VSGKKTTGFYRTYSFTLL 243
++M+PE I++ +SDV+SFGVLL +I + G G F LL
Sbjct: 215 -PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLL 265
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 114/245 (46%), Gaps = 43/245 (17%)
Query: 53 ANKLGEGGFGPVYKGVLK-NGDEIAVKRLSGRS-------GQGLRELKNKLRLLGCCIDK 104
+ LG G FG V G + G ++AVK L+ + G+ RE++N L+L
Sbjct: 16 GDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQN-LKLF----RH 70
Query: 105 DEKILIYEYMPNKSLDFF----------LFDWVTRV---------RIIEGIAQGLLYLHQ 145
I +Y+ + + DFF LFD++ + R+ + I + Y H+
Sbjct: 71 PHIIKLYQVISTPT-DFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHR 129
Query: 146 YSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAI 205
+ ++HRDLK N+LLD MN KI+DFG++ + E ++ G+ Y +PE
Sbjct: 130 HM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDS---CGSPNYAAPEVIS 183
Query: 206 QGIFS-IKSDVFSFGVLLLKIVSGKKTTGFYRTYSFTLLGYISENIYEFPSVDTHNVKTF 264
+++ + D++S GV+L ++ G T F + TL I ++ P +V T
Sbjct: 184 GRLYAGPEVDIWSCGVILYALLCG--TLPFDDEHVPTLFKKIRGGVFYIPEYLNRSVATL 241
Query: 265 GFLHL 269
+H+
Sbjct: 242 -LMHM 245
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 64/114 (56%), Gaps = 8/114 (7%)
Query: 135 GIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVG 194
+ +GL YL + + +I+HRD+K SNIL++ K+ DFG++ G + + VG
Sbjct: 131 AVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVG 184
Query: 195 TYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGKKT--TGFYRTYSFTLLGYI 246
T YMSPE +S++SD++S G+ L+++ G+ +G F LL YI
Sbjct: 185 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYI 238
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 99/242 (40%), Gaps = 43/242 (17%)
Query: 40 FSSVSTATNKFSDANKLGEGGFGPVYKGVLKNGDEI-AVKRL-------SGRSGQGLREL 91
S A F LG+G FG VY K I A+K L +G Q RE+
Sbjct: 3 LGSRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 62
Query: 92 K--------NKLRLLGCCIDKDEKILIYEYMPNKSLDFFL-----FDWVTRVRIIEGIAQ 138
+ N LRL G D LI EY P ++ L FD I +A
Sbjct: 63 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 122
Query: 139 GLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGR---IVGT 195
L Y H R+IHRD+K N+LL KI+DFG + + A + R + GT
Sbjct: 123 ALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRDDLCGT 172
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGK---KTTGFYRTY------SFTLLGYI 246
Y+ PE + K D++S GVL + + GK + + TY FT ++
Sbjct: 173 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV 232
Query: 247 SE 248
+E
Sbjct: 233 TE 234
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 98/200 (49%), Gaps = 27/200 (13%)
Query: 50 FSDANKLGEGGFGPVYKGVLK-NGDEIAVKRL------SGRSGQGLREL--------KNK 94
F K+GEG +G VYK K G+ +A+K++ G +RE+ N
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 95 LRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTRVRI------IEGIAQGLLYLHQYSR 148
++LL +++ L++E++ F +T + + + + QGL + H +
Sbjct: 68 VKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 125
Query: 149 VRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQ-G 207
R++HRDLK N+L++ + K++DFG+AR G ++ +V T Y +PE +
Sbjct: 126 -RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVV-TLWYRAPEILLGCK 182
Query: 208 IFSIKSDVFSFGVLLLKIVS 227
+S D++S G + ++V+
Sbjct: 183 YYSTAVDIWSLGCIFAEMVT 202
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 86/206 (41%), Gaps = 37/206 (17%)
Query: 56 LGEGGFGPVYKGVLKNGD------EIAVKRLSGRSGQG-----LREL--------KNKLR 96
LG G FG VY+G + ++AVK L + L E +N +R
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 97 LLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTR------------VRIIEGIAQGLLYLH 144
+G + + ++ E M L FL + R + + IA G YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 145 QYSRVRIIHRDLKVSNILL---DKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSP 201
+ IHRD+ N LL KI DFG+AR G + ++M P
Sbjct: 173 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 202 EYAIQGIFSIKSDVFSFGVLLLKIVS 227
E ++GIF+ K+D +SFGVLL +I S
Sbjct: 230 EAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 86/206 (41%), Gaps = 37/206 (17%)
Query: 56 LGEGGFGPVYKGVLKNGD------EIAVKRLSGRSGQG-----LREL--------KNKLR 96
LG G FG VY+G + ++AVK L + L E +N +R
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 97 LLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTR------------VRIIEGIAQGLLYLH 144
+G + + ++ E M L FL + R + + IA G YL
Sbjct: 116 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 175
Query: 145 QYSRVRIIHRDLKVSNILL---DKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSP 201
+ IHRD+ N LL KI DFG+AR G + ++M P
Sbjct: 176 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPP 232
Query: 202 EYAIQGIFSIKSDVFSFGVLLLKIVS 227
E ++GIF+ K+D +SFGVLL +I S
Sbjct: 233 EAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 98/200 (49%), Gaps = 27/200 (13%)
Query: 50 FSDANKLGEGGFGPVYKGVLK-NGDEIAVKRL------SGRSGQGLREL--------KNK 94
F K+GEG +G VYK K G+ +A+K++ G +RE+ N
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 68
Query: 95 LRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTRVRI------IEGIAQGLLYLHQYSR 148
++LL +++ L++E++ F +T + + + + QGL + H +
Sbjct: 69 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 126
Query: 149 VRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQ-G 207
R++HRDLK N+L++ + K++DFG+AR G ++ +V T Y +PE +
Sbjct: 127 -RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVV-TLWYRAPEILLGCK 183
Query: 208 IFSIKSDVFSFGVLLLKIVS 227
+S D++S G + ++V+
Sbjct: 184 YYSTAVDIWSLGCIFAEMVT 203
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 99/241 (41%), Gaps = 43/241 (17%)
Query: 41 SSVSTATNKFSDANKLGEGGFGPVYKGVLKNGDEI-AVKRL-------SGRSGQGLRELK 92
S A F LG+G FG VY K I A+K L +G Q RE++
Sbjct: 5 SKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 64
Query: 93 --------NKLRLLGCCIDKDEKILIYEYMPNKSLDFFL-----FDWVTRVRIIEGIAQG 139
N LRL G D LI EY P ++ L FD I +A
Sbjct: 65 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 124
Query: 140 LLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGR---IVGTY 196
L Y H R+IHRD+K N+LL KI+DFG + + A + R + GT
Sbjct: 125 LSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTTLCGTL 174
Query: 197 RYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGK---KTTGFYRTY------SFTLLGYIS 247
Y+ PE + K D++S GVL + + GK + + TY FT +++
Sbjct: 175 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVT 234
Query: 248 E 248
E
Sbjct: 235 E 235
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 98/200 (49%), Gaps = 27/200 (13%)
Query: 50 FSDANKLGEGGFGPVYKGVLK-NGDEIAVKRL------SGRSGQGLREL--------KNK 94
F K+GEG +G VYK K G+ +A+K++ G +RE+ N
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 95 LRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTRVRI------IEGIAQGLLYLHQYSR 148
++LL +++ L++E++ F +T + + + + QGL + H +
Sbjct: 68 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 125
Query: 149 VRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQ-G 207
R++HRDLK N+L++ + K++DFG+AR G ++ +V T Y +PE +
Sbjct: 126 -RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVV-TLWYRAPEILLGCK 182
Query: 208 IFSIKSDVFSFGVLLLKIVS 227
+S D++S G + ++V+
Sbjct: 183 YYSTAVDIWSLGCIFAEMVT 202
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 98/236 (41%), Gaps = 43/236 (18%)
Query: 46 ATNKFSDANKLGEGGFGPVYKGVLKNGDEI-AVKRL-------SGRSGQGLRELK----- 92
A F LG+G FG VY K I A+K L +G Q RE++
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 93 ---NKLRLLGCCIDKDEKILIYEYMPNKSLDFFL-----FDWVTRVRIIEGIAQGLLYLH 144
N LRL G D LI EY P ++ L FD I +A L Y H
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 124
Query: 145 QYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGR---IVGTYRYMSP 201
R+IHRD+K N+LL KI+DFG + + A + R + GT Y+ P
Sbjct: 125 S---KRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTTLCGTLDYLPP 174
Query: 202 EYAIQGIFSIKSDVFSFGVLLLKIVSGK---KTTGFYRTY------SFTLLGYISE 248
E + K D++S GVL + + GK + + TY FT +++E
Sbjct: 175 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 230
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 102/236 (43%), Gaps = 40/236 (16%)
Query: 54 NKLGEGGFGPVYKGV-LKNGDEIAVK-----RLSGRSGQGLRELKNKLRLLGCCIDKDEK 107
+LG+G F V + V + G E A K +LS R Q L RLL K
Sbjct: 28 EELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLL-----KHPN 82
Query: 108 IL-IYEYMPNKSLDFFLFDWVT------------------RVRIIEGIAQGLLYLHQYSR 148
I+ +++ + + + +FD VT I+ I + +L+ HQ
Sbjct: 83 IVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMG- 141
Query: 149 VRIIHRDLKVSNILLD---KDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAI 205
++HRDLK N+LL K K++DFG+A G E QA G GT Y+SPE
Sbjct: 142 --VVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEG-EQQAWFG-FAGTPGYLSPEVLR 197
Query: 206 QGIFSIKSDVFSFGVLLLKIVSGKKTTGFYRTYSFTLLGYISENIYEFPSVDTHNV 261
+ + D+++ GV+L ++ G F+ L I Y+FPS + V
Sbjct: 198 KDPYGKPVDLWACGVILYILLVGYPP--FWDEDQHRLYQQIKAGAYDFPSPEWDTV 251
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 52/100 (52%), Gaps = 19/100 (19%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIA-RICRGNELQANTGRIVG 194
I + Y HQ RI+HRDLK N+LLD DMN KI+DFG + G +L A G
Sbjct: 123 IVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCG---- 175
Query: 195 TYRYMSPEYAIQGIFSIKS------DVFSFGVLLLKIVSG 228
+P YA +F K DV+S GV+L +VSG
Sbjct: 176 -----APPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 210
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 98/236 (41%), Gaps = 43/236 (18%)
Query: 46 ATNKFSDANKLGEGGFGPVYKGVLKNGDEI-AVKRL-------SGRSGQGLRELK----- 92
A F LG+G FG VY K I A+K L +G Q RE++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 93 ---NKLRLLGCCIDKDEKILIYEYMPNKSLDFFL-----FDWVTRVRIIEGIAQGLLYLH 144
N LRL G D LI EY P ++ L FD I +A L Y H
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 145 QYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGR---IVGTYRYMSP 201
R+IHRD+K N+LL KI+DFG + + A + R + GT Y+ P
Sbjct: 126 S---KRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRAALCGTLDYLPP 175
Query: 202 EYAIQGIFSIKSDVFSFGVLLLKIVSGK---KTTGFYRTY------SFTLLGYISE 248
E + K D++S GVL + + GK + + TY FT +++E
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 231
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 105/247 (42%), Gaps = 43/247 (17%)
Query: 46 ATNKFSD----ANKLGEGGFGPVYKGVLKN-GDEIAVK-----RLSGRSGQGLRELKNKL 95
A+ KFSD +LG+G F V + V K G E A K +LS R Q L
Sbjct: 23 ASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARIC 82
Query: 96 RLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTRVRIIEGIA------------------ 137
R L + +++ + +S + +FD VT + E I
Sbjct: 83 RKL----QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQIL 138
Query: 138 QGLLYLHQYSRVRIIHRDLKVSNILLD---KDMNPKISDFGIARICRGNELQANTGRIVG 194
+ + Y H I+HR+LK N+LL K K++DFG+A N+ +A G G
Sbjct: 139 ESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHG-FAG 192
Query: 195 TYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGKKTTGFYRTYSFTLLGYISENIYEFP 254
T Y+SPE + +S D+++ GV+L ++ G F+ L I Y++P
Sbjct: 193 TPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP--FWDEDQHRLYAQIKAGAYDYP 250
Query: 255 SVDTHNV 261
S + V
Sbjct: 251 SPEWDTV 257
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 98/236 (41%), Gaps = 43/236 (18%)
Query: 46 ATNKFSDANKLGEGGFGPVYKGVLKNGDEI-AVKRL-------SGRSGQGLRELK----- 92
A F LG+G FG VY K I A+K L +G Q RE++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 93 ---NKLRLLGCCIDKDEKILIYEYMPNKSLDFFL-----FDWVTRVRIIEGIAQGLLYLH 144
N LRL G D LI EY P ++ L FD I +A L Y H
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 145 QYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGR---IVGTYRYMSP 201
R+IHRD+K N+LL KI+DFG + + A + R + GT Y+ P
Sbjct: 129 S---KRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTTLCGTLDYLPP 178
Query: 202 EYAIQGIFSIKSDVFSFGVLLLKIVSGK---KTTGFYRTY------SFTLLGYISE 248
E + K D++S GVL + + GK + + TY FT +++E
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 234
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 98/236 (41%), Gaps = 43/236 (18%)
Query: 46 ATNKFSDANKLGEGGFGPVYKGVLKNGDEI-AVKRL-------SGRSGQGLRELK----- 92
A F LG+G FG VY K I A+K L +G Q RE++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 93 ---NKLRLLGCCIDKDEKILIYEYMPNKSLDFFL-----FDWVTRVRIIEGIAQGLLYLH 144
N LRL G D LI EY P ++ L FD I +A L Y H
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 145 QYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGR---IVGTYRYMSP 201
R+IHRD+K N+LL KI+DFG + + A + R + GT Y+ P
Sbjct: 126 S---KRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTXLCGTLDYLPP 175
Query: 202 EYAIQGIFSIKSDVFSFGVLLLKIVSGK---KTTGFYRTY------SFTLLGYISE 248
E + K D++S GVL + + GK + + TY FT +++E
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 231
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 96/213 (45%), Gaps = 33/213 (15%)
Query: 41 SSVSTATNKFSDANKLGEGGFGPVYKGVLKN-GDEIAVKRL-------------SGRSGQ 86
SS + F LG+G FG V +K GD AVK L + +
Sbjct: 16 SSNRLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKR 75
Query: 87 GLRELKNK--LRLLGCCIDKDEKIL-IYEYMPNKSLDFFL-----FDWVTRVRIIEG-IA 137
L +N L L CC +++ + E++ L F + FD R R I
Sbjct: 76 ILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFD-EARARFYAAEII 134
Query: 138 QGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIAR--ICRGNELQANTGRIVGT 195
L++LH II+RDLK+ N+LLD + + K++DFG+ + IC G T GT
Sbjct: 135 SALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNG----VTTATFCGT 187
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
Y++PE + ++ D ++ GVLL +++ G
Sbjct: 188 PDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCG 220
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 98/236 (41%), Gaps = 43/236 (18%)
Query: 46 ATNKFSDANKLGEGGFGPVYKGVLKNGDEI-AVKRL-------SGRSGQGLRELK----- 92
A F LG+G FG VY K I A+K L +G Q RE++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 93 ---NKLRLLGCCIDKDEKILIYEYMPNKSLDFFL-----FDWVTRVRIIEGIAQGLLYLH 144
N LRL G D LI EY P ++ L FD I +A L Y H
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 145 QYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGR---IVGTYRYMSP 201
R+IHRD+K N+LL KI+DFG + + A + R + GT Y+ P
Sbjct: 129 S---KRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRXXLCGTLDYLPP 178
Query: 202 EYAIQGIFSIKSDVFSFGVLLLKIVSGK---KTTGFYRTY------SFTLLGYISE 248
E + K D++S GVL + + GK + + TY FT +++E
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 234
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 108/265 (40%), Gaps = 67/265 (25%)
Query: 31 EVDQLPLFSFSSVSTATNKFSDANKLGEGGFGPVY--------KGVLKNGDEIAVKRLSG 82
E+ + P + F +K + LGEG FG V K K +AVK L
Sbjct: 23 ELPEDPKWEFPR-----DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD 77
Query: 83 RSGQ-GLREL-------------KNKLRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVT 128
+ + L +L KN + LLG C +I EY +L +L
Sbjct: 78 DATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL----- 132
Query: 129 RVRIIEG--------------------------IAQGLLYLHQYSRVRIIHRDLKVSNIL 162
R R G +A+G+ YL + + IHRDL N+L
Sbjct: 133 RARRPPGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVL 189
Query: 163 LDKDMNPKISDFGIARICRGNELQANT--GRIVGTYRYMSPEYAIQGIFSIKSDVFSFGV 220
+ ++ KI+DFG+AR + T GR+ ++M+PE +++ +SDV+SFGV
Sbjct: 190 VTENNVMKIADFGLARDINNIDXXKKTTNGRL--PVKWMAPEALFDRVYTHQSDVWSFGV 247
Query: 221 LLLKI--VSGKKTTGFYRTYSFTLL 243
L+ +I + G G F LL
Sbjct: 248 LMWEIFTLGGSPYPGIPVEELFKLL 272
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 108/265 (40%), Gaps = 67/265 (25%)
Query: 31 EVDQLPLFSFSSVSTATNKFSDANKLGEGGFGPVY--------KGVLKNGDEIAVKRLSG 82
E+ + P + F +K + LGEG FG V K K +AVK L
Sbjct: 23 ELPEDPKWEFPR-----DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD 77
Query: 83 RSGQ-GLREL-------------KNKLRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVT 128
+ + L +L KN + LLG C +I EY +L +L
Sbjct: 78 DATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL----- 132
Query: 129 RVRIIEG--------------------------IAQGLLYLHQYSRVRIIHRDLKVSNIL 162
R R G +A+G+ YL + + IHRDL N+L
Sbjct: 133 RARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVL 189
Query: 163 LDKDMNPKISDFGIARICRGNELQANT--GRIVGTYRYMSPEYAIQGIFSIKSDVFSFGV 220
+ ++ KI+DFG+AR + T GR+ ++M+PE +++ +SDV+SFGV
Sbjct: 190 VTENNVMKIADFGLARDINNIDXXKKTTNGRL--PVKWMAPEALFDRVYTHQSDVWSFGV 247
Query: 221 LLLKI--VSGKKTTGFYRTYSFTLL 243
L+ +I + G G F LL
Sbjct: 248 LMWEIFTLGGSPYPGIPVEELFKLL 272
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 64/122 (52%), Gaps = 13/122 (10%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGT 195
I G YLH R R+IHRDLK+ N+ L++D+ KI DFG+A + + T + GT
Sbjct: 130 IVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCGT 184
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGK---KTTGFYRTYSFTLLGYISENIYE 252
Y++PE + S + DV+S G ++ ++ GK +T+ TY I +N Y
Sbjct: 185 PNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYL-----RIKKNEYS 239
Query: 253 FP 254
P
Sbjct: 240 IP 241
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 98/201 (48%), Gaps = 30/201 (14%)
Query: 55 KLGEGGFGPVYKG--------------VLKN-GDEIAVKRLSGRSGQGLRELKNK--LRL 97
+LG G FG V KG +LKN ++ A+K +++L N +R+
Sbjct: 34 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 93
Query: 98 LGCCIDKDEKILIYEYMPNKSLDFFLFD--WVTRVRIIEGIAQ---GLLYLHQYSRVRII 152
+G C + + +L+ E L+ +L V IIE + Q G+ YL + + +
Sbjct: 94 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESN---FV 149
Query: 153 HRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTY--RYMSPEYAIQGIFS 210
HRDL N+LL KISDFG+++ R +E + G + ++ +PE FS
Sbjct: 150 HRDLAARNVLLVTQHYAKISDFGLSKALRADE-NYYKAQTHGKWPVKWYAPECINYYKFS 208
Query: 211 IKSDVFSFGVLLLKIVS-GKK 230
KSDV+SFGVL+ + S G+K
Sbjct: 209 SKSDVWSFGVLMWEAFSYGQK 229
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 98/201 (48%), Gaps = 30/201 (14%)
Query: 55 KLGEGGFGPVYKG--------------VLKN-GDEIAVKRLSGRSGQGLRELKNK--LRL 97
+LG G FG V KG +LKN ++ A+K +++L N +R+
Sbjct: 34 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 93
Query: 98 LGCCIDKDEKILIYEYMPNKSLDFFLFD--WVTRVRIIEGIAQ---GLLYLHQYSRVRII 152
+G C + + +L+ E L+ +L V IIE + Q G+ YL + + +
Sbjct: 94 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESN---FV 149
Query: 153 HRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTY--RYMSPEYAIQGIFS 210
HRDL N+LL KISDFG+++ R +E + G + ++ +PE FS
Sbjct: 150 HRDLAARNVLLVTQHYAKISDFGLSKALRADE-NYYKAQTHGKWPVKWYAPECINYYKFS 208
Query: 211 IKSDVFSFGVLLLKIVS-GKK 230
KSDV+SFGVL+ + S G+K
Sbjct: 209 SKSDVWSFGVLMWEAFSYGQK 229
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 64/122 (52%), Gaps = 13/122 (10%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGT 195
I G YLH R R+IHRDLK+ N+ L++D+ KI DFG+A + + T + GT
Sbjct: 126 IVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCGT 180
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGK---KTTGFYRTYSFTLLGYISENIYE 252
Y++PE + S + DV+S G ++ ++ GK +T+ TY I +N Y
Sbjct: 181 PNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYL-----RIKKNEYS 235
Query: 253 FP 254
P
Sbjct: 236 IP 237
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 98/236 (41%), Gaps = 43/236 (18%)
Query: 46 ATNKFSDANKLGEGGFGPVYKGVLKNGDEI-AVKRL-------SGRSGQGLRELK----- 92
A F LG+G FG VY K I A+K L +G Q RE++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 93 ---NKLRLLGCCIDKDEKILIYEYMPNKSLDFFL-----FDWVTRVRIIEGIAQGLLYLH 144
N LRL G D LI EY P ++ L FD I +A L Y H
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 145 QYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGR---IVGTYRYMSP 201
R+IHRD+K N+LL KI+DFG + + A + R + GT Y+ P
Sbjct: 126 S---KRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRXXLCGTLDYLPP 175
Query: 202 EYAIQGIFSIKSDVFSFGVLLLKIVSGK---KTTGFYRTY------SFTLLGYISE 248
E + K D++S GVL + + GK + + TY FT +++E
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 231
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 64/122 (52%), Gaps = 13/122 (10%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGT 195
I G YLH R R+IHRDLK+ N+ L++D+ KI DFG+A + + T + GT
Sbjct: 126 IVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCGT 180
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGK---KTTGFYRTYSFTLLGYISENIYE 252
Y++PE + S + DV+S G ++ ++ GK +T+ TY I +N Y
Sbjct: 181 PNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYL-----RIKKNEYS 235
Query: 253 FP 254
P
Sbjct: 236 IP 237
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 105/209 (50%), Gaps = 31/209 (14%)
Query: 43 VSTATNKFSDANKLGEGGFGPVYKGVLKNGDEI-AVKRL---------SGRSGQGLRELK 92
V + ++ + LGEG F VYK KN ++I A+K++ G + LRE+K
Sbjct: 5 VKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIK 64
Query: 93 --------NKLRLLGCCIDKDEKILIYEYMPNKSLDFFLFD--WVTRVRIIEGIA----Q 138
N + LL K L++++M L+ + D V I+ Q
Sbjct: 65 LLQELSHPNIIGLLDAFGHKSNISLVFDFM-ETDLEVIIKDNSLVLTPSHIKAYMLMTLQ 123
Query: 139 GLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRY 198
GL YLHQ+ I+HRDLK +N+LLD++ K++DFG+A+ G+ +A ++V T Y
Sbjct: 124 GLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAK-SFGSPNRAYXHQVV-TRWY 178
Query: 199 MSPEYAIQG-IFSIKSDVFSFGVLLLKIV 226
+PE ++ + D+++ G +L +++
Sbjct: 179 RAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 113/245 (46%), Gaps = 43/245 (17%)
Query: 53 ANKLGEGGFGPVYKGVLK-NGDEIAVKRLSGRS-------GQGLRELKNKLRLLGCCIDK 104
+ LG G FG V G + G ++AVK L+ + G+ RE++N L+L
Sbjct: 16 GDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQN-LKLF----RH 70
Query: 105 DEKILIYEYMPNKSLDFF----------LFDWVTRV---------RIIEGIAQGLLYLHQ 145
I +Y+ + + DFF LFD++ + R+ + I + Y H+
Sbjct: 71 PHIIKLYQVISTPT-DFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHR 129
Query: 146 YSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAI 205
+ ++HRDLK N+LLD MN KI+DFG++ + E + G+ Y +PE
Sbjct: 130 HM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTS---CGSPNYAAPEVIS 183
Query: 206 QGIFS-IKSDVFSFGVLLLKIVSGKKTTGFYRTYSFTLLGYISENIYEFPSVDTHNVKTF 264
+++ + D++S GV+L ++ G T F + TL I ++ P +V T
Sbjct: 184 GRLYAGPEVDIWSCGVILYALLCG--TLPFDDEHVPTLFKKIRGGVFYIPEYLNRSVATL 241
Query: 265 GFLHL 269
+H+
Sbjct: 242 -LMHM 245
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 98/200 (49%), Gaps = 27/200 (13%)
Query: 50 FSDANKLGEGGFGPVYKGVLK-NGDEIAVKRL------SGRSGQGLREL--------KNK 94
F K+GEG +G VYK K G+ +A+K++ G +RE+ N
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 95 LRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTRVRI------IEGIAQGLLYLHQYSR 148
++LL +++ L++E++ F +T + + + + QGL + H +
Sbjct: 66 VKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 123
Query: 149 VRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQ-G 207
R++HRDLK N+L++ + K++DFG+AR G ++ +V T Y +PE +
Sbjct: 124 -RVLHRDLKPENLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVV-TLWYRAPEILLGCK 180
Query: 208 IFSIKSDVFSFGVLLLKIVS 227
+S D++S G + ++V+
Sbjct: 181 YYSTAVDIWSLGCIFAEMVT 200
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 98/200 (49%), Gaps = 27/200 (13%)
Query: 50 FSDANKLGEGGFGPVYKGVLK-NGDEIAVKRL------SGRSGQGLREL--------KNK 94
F K+GEG +G VYK K G+ +A+K++ G +RE+ N
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 95 LRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTRVRI------IEGIAQGLLYLHQYSR 148
++LL +++ L++E++ F +T + + + + QGL + H +
Sbjct: 68 VKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 125
Query: 149 VRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQ-G 207
R++HRDLK N+L++ + K++DFG+AR G ++ +V T Y +PE +
Sbjct: 126 -RVLHRDLKPENLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVV-TLWYRAPEILLGCK 182
Query: 208 IFSIKSDVFSFGVLLLKIVS 227
+S D++S G + ++V+
Sbjct: 183 YYSTAVDIWSLGCIFAEMVT 202
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 108/242 (44%), Gaps = 34/242 (14%)
Query: 45 TATNKFSDANKLGEGGFGPVYKGV-LKNGDEIAVK-----RLSGRSGQGLRELKNKLRLL 98
+ T+++ +LG+G F V + + + G E A K +LS R Q L RLL
Sbjct: 1 SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLL 60
Query: 99 GCCIDKDEKIL-IYEYMPNKSLDFFLFDWVTRVRIIEGIA--------------QGLLYL 143
K I+ +++ + + + +FD VT + E I Q +L
Sbjct: 61 -----KHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILES 115
Query: 144 HQYSRVR-IIHRDLKVSNILL---DKDMNPKISDFGIARICRGNELQANTGRIVGTYRYM 199
+ + I+HRDLK N+LL K K++DFG+A +G++ QA G GT Y+
Sbjct: 116 VNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQ-QAWFG-FAGTPGYL 173
Query: 200 SPEYAIQGIFSIKSDVFSFGVLLLKIVSGKKTTGFYRTYSFTLLGYISENIYEFPSVDTH 259
SPE + + D+++ GV+L ++ G F+ L I Y+FPS +
Sbjct: 174 SPEVLRKDPYGKPVDMWACGVILYILLVG--YPPFWDEDQHRLYQQIKAGAYDFPSPEWD 231
Query: 260 NV 261
V
Sbjct: 232 TV 233
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 101/214 (47%), Gaps = 37/214 (17%)
Query: 46 ATNKFSDANKLGEGGFGPVYKGV-LKNGDEIAVKRLSGRSGQG------------LRELK 92
AT+++ ++G G +G VYK +G +A+K + +G+ LR L+
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 93 -----NKLRLLGCC----IDKDEKI-LIYEYMPNKSLDFFL-------FDWVTRVRIIEG 135
N +RL+ C D++ K+ L++E++ ++ L +L T ++
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGT 195
+GL +LH I+HRDLK NIL+ K++DFG+ARI Q +V T
Sbjct: 121 FLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI---YSYQMALAPVVVT 174
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGK 229
Y +PE +Q ++ D++S G + ++ K
Sbjct: 175 LWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 98/201 (48%), Gaps = 30/201 (14%)
Query: 55 KLGEGGFGPVYKG--------------VLKN-GDEIAVKRLSGRSGQGLRELKNK--LRL 97
+LG G FG V KG +LKN ++ A+K +++L N +R+
Sbjct: 18 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 77
Query: 98 LGCCIDKDEKILIYEYMPNKSLDFFLFD--WVTRVRIIEGIAQ---GLLYLHQYSRVRII 152
+G C + + +L+ E L+ +L V IIE + Q G+ YL + + +
Sbjct: 78 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESN---FV 133
Query: 153 HRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTY--RYMSPEYAIQGIFS 210
HRDL N+LL KISDFG+++ R +E + G + ++ +PE FS
Sbjct: 134 HRDLAARNVLLVTQHYAKISDFGLSKALRADE-NXYKAQTHGKWPVKWYAPECINYYKFS 192
Query: 211 IKSDVFSFGVLLLKIVS-GKK 230
KSDV+SFGVL+ + S G+K
Sbjct: 193 SKSDVWSFGVLMWEAFSYGQK 213
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 103/247 (41%), Gaps = 65/247 (26%)
Query: 31 EVDQLPLFSFSSVSTATNKFSDANKLGEGGFGPVY--------KGVLKNGDEIAVKRLSG 82
E+ + P + F +K + LGEG FG V K K +AVK L
Sbjct: 23 ELPEDPKWEFPR-----DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD 77
Query: 83 RSGQ-GLREL-------------KNKLRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVT 128
+ + L +L KN + LLG C +I EY +L +L
Sbjct: 78 DATEKDLSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYL----- 132
Query: 129 RVRIIEG--------------------------IAQGLLYLHQYSRVRIIHRDLKVSNIL 162
R R G +A+G+ YL + + IHRDL N+L
Sbjct: 133 RARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVL 189
Query: 163 LDKDMNPKISDFGIARICRGNELQANT--GRIVGTYRYMSPEYAIQGIFSIKSDVFSFGV 220
+ ++ KI+DFG+AR + T GR+ ++M+PE +++ +SDV+SFGV
Sbjct: 190 VTENNVMKIADFGLARDINNIDYYKKTTNGRL--PVKWMAPEALFDRVYTHQSDVWSFGV 247
Query: 221 LLLKIVS 227
L+ +I +
Sbjct: 248 LMWEIFT 254
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 108/242 (44%), Gaps = 34/242 (14%)
Query: 45 TATNKFSDANKLGEGGFGPVYKGV-LKNGDEIAVK-----RLSGRSGQGLRELKNKLRLL 98
+ T+++ +LG+G F V + + + G E A K +LS R Q L RLL
Sbjct: 1 SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLL 60
Query: 99 GCCIDKDEKIL-IYEYMPNKSLDFFLFDWVTRVRIIEGIA--------------QGLLYL 143
K I+ +++ + + + +FD VT + E I Q +L
Sbjct: 61 -----KHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILES 115
Query: 144 HQYSRVR-IIHRDLKVSNILL---DKDMNPKISDFGIARICRGNELQANTGRIVGTYRYM 199
+ + I+HRDLK N+LL K K++DFG+A +G++ QA G GT Y+
Sbjct: 116 VNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQ-QAWFG-FAGTPGYL 173
Query: 200 SPEYAIQGIFSIKSDVFSFGVLLLKIVSGKKTTGFYRTYSFTLLGYISENIYEFPSVDTH 259
SPE + + D+++ GV+L ++ G F+ L I Y+FPS +
Sbjct: 174 SPEVLRKDPYGKPVDMWACGVILYILLVGYPP--FWDEDQHRLYQQIKAGAYDFPSPEWD 231
Query: 260 NV 261
V
Sbjct: 232 TV 233
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 57/94 (60%), Gaps = 7/94 (7%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANT--GRIV 193
+A+G+ YL + + IHRDL N+L+ +D KI+DFG+AR + T GR+
Sbjct: 152 VARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRL- 207
Query: 194 GTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVS 227
++M+PE I++ +SDV+SFGVLL +I +
Sbjct: 208 -PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 57/94 (60%), Gaps = 7/94 (7%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANT--GRIV 193
+A+G+ YL + + IHRDL N+L+ +D KI+DFG+AR + T GR+
Sbjct: 200 VARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRL- 255
Query: 194 GTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVS 227
++M+PE I++ +SDV+SFGVLL +I +
Sbjct: 256 -PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 52/100 (52%), Gaps = 19/100 (19%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIA-RICRGNELQANTGRIVG 194
I + Y HQ I+HRDLK N+LLD DMN KI+DFG + GN+L A G
Sbjct: 122 IVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAFCG---- 174
Query: 195 TYRYMSPEYAIQGIFSIKS------DVFSFGVLLLKIVSG 228
+P YA +F K DV+S GV+L +VSG
Sbjct: 175 -----APPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 57/94 (60%), Gaps = 7/94 (7%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANT--GRIV 193
+A+G+ YL + + IHRDL N+L+ +D KI+DFG+AR + T GR+
Sbjct: 159 VARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRL- 214
Query: 194 GTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVS 227
++M+PE I++ +SDV+SFGVLL +I +
Sbjct: 215 -PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 57/94 (60%), Gaps = 7/94 (7%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANT--GRIV 193
+A+G+ YL + + IHRDL N+L+ +D KI+DFG+AR + T GR+
Sbjct: 144 VARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRL- 199
Query: 194 GTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVS 227
++M+PE I++ +SDV+SFGVLL +I +
Sbjct: 200 -PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 105/243 (43%), Gaps = 40/243 (16%)
Query: 47 TNKFSDANKLGEGGFGPVYKGV-LKNGDEIAV-----KRLSGRSGQGLRELKNKLRLLGC 100
T ++ +LG+G F V + V + G E A K+LS R Q L RLL
Sbjct: 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLL-- 67
Query: 101 CIDKDEKIL-IYEYMPNKSLDFFLFDWVT------------------RVRIIEGIAQGLL 141
K I+ +++ + + + +FD VT I+ I + +L
Sbjct: 68 ---KHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVL 124
Query: 142 YLHQYSRVRIIHRDLKVSNILLD---KDMNPKISDFGIARICRGNELQANTGRIVGTYRY 198
+ HQ ++HR+LK N+LL K K++DFG+A G E QA G GT Y
Sbjct: 125 HCHQMG---VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEG-EQQAWFG-FAGTPGY 179
Query: 199 MSPEYAIQGIFSIKSDVFSFGVLLLKIVSGKKTTGFYRTYSFTLLGYISENIYEFPSVDT 258
+SPE + + D+++ GV+L ++ G F+ L I Y+FPS +
Sbjct: 180 LSPEVLRKDPYGKPVDLWACGVILYILLVGYPP--FWDEDQHRLYQQIKAGAYDFPSPEW 237
Query: 259 HNV 261
V
Sbjct: 238 DTV 240
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 57/94 (60%), Gaps = 7/94 (7%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANT--GRIV 193
+A+G+ YL + + IHRDL N+L+ +D KI+DFG+AR + T GR+
Sbjct: 151 VARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRL- 206
Query: 194 GTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVS 227
++M+PE I++ +SDV+SFGVLL +I +
Sbjct: 207 -PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 57/94 (60%), Gaps = 7/94 (7%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANT--GRIV 193
+A+G+ YL + + IHRDL N+L+ +D KI+DFG+AR + T GR+
Sbjct: 148 VARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRL- 203
Query: 194 GTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVS 227
++M+PE I++ +SDV+SFGVLL +I +
Sbjct: 204 -PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 100/201 (49%), Gaps = 31/201 (15%)
Query: 54 NKLGEGGFGPV----YKGVLKN-GDEIAVKRLSGRSGQGLRELKNKLRLLGCCID----- 103
++LG+G FG V Y + N G +AVK+L R+ + ++++L
Sbjct: 13 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 72
Query: 104 ---------KDEKILIYEYMPNKSLDFFLFDWVTRV---RII---EGIAQGLLYLHQYSR 148
+ E L+ EY+P+ L FL R+ R++ I +G+ YL SR
Sbjct: 73 YRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLG--SR 130
Query: 149 VRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYR--YMSPEYAIQ 206
R +HRDL NIL++ + + KI+DFG+A++ ++ R G + +PE
Sbjct: 131 -RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDK-DXXVVREPGQSPIFWYAPESLSD 188
Query: 207 GIFSIKSDVFSFGVLLLKIVS 227
IFS +SDV+SFGV+L ++ +
Sbjct: 189 NIFSRQSDVWSFGVVLYELFT 209
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 57/94 (60%), Gaps = 7/94 (7%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANT--GRIV 193
+A+G+ YL + + IHRDL N+L+ +D KI+DFG+AR + T GR+
Sbjct: 159 VARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRL- 214
Query: 194 GTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVS 227
++M+PE I++ +SDV+SFGVLL +I +
Sbjct: 215 -PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 57/94 (60%), Gaps = 7/94 (7%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANT--GRIV 193
+A+G+ YL + + IHRDL N+L+ +D KI+DFG+AR + T GR+
Sbjct: 159 VARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRL- 214
Query: 194 GTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVS 227
++M+PE I++ +SDV+SFGVLL +I +
Sbjct: 215 -PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 98/201 (48%), Gaps = 30/201 (14%)
Query: 55 KLGEGGFGPVYKG--------------VLKN-GDEIAVKRLSGRSGQGLRELKNK--LRL 97
+LG G FG V KG +LKN ++ A+K +++L N +R+
Sbjct: 32 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 91
Query: 98 LGCCIDKDEKILIYEYMPNKSLDFFLFD--WVTRVRIIEGIAQ---GLLYLHQYSRVRII 152
+G C + + +L+ E L+ +L V IIE + Q G+ YL + + +
Sbjct: 92 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESN---FV 147
Query: 153 HRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTY--RYMSPEYAIQGIFS 210
HRDL N+LL KISDFG+++ R +E + G + ++ +PE FS
Sbjct: 148 HRDLAARNVLLVTQHYAKISDFGLSKALRADE-NYYKAQTHGKWPVKWYAPECINYYKFS 206
Query: 211 IKSDVFSFGVLLLKIVS-GKK 230
KSDV+SFGVL+ + S G+K
Sbjct: 207 SKSDVWSFGVLMWEAFSYGQK 227
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 90/172 (52%), Gaps = 26/172 (15%)
Query: 71 NGDEIAVKRLSGRSGQGLR---ELKNK--LRLLGCCIDKDEKILIYEYMPNKSL-----D 120
N D+I++K L+ ++KN+ L G + DE +IYEYM N S+
Sbjct: 77 NNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEY 136
Query: 121 FFLFD----WVTRVRIIEGIAQGLL----YLHQYSRVRIIHRDLKVSNILLDKDMNPKIS 172
FF+ D +++I+ I + +L Y+H + I HRD+K SNIL+DK+ K+S
Sbjct: 137 FFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIH--NEKNICHRDVKPSNILMDKNGRVKLS 194
Query: 173 DFGIARICRGNELQANTGRIVGTYRYMSPE-YAIQGIFS-IKSDVFSFGVLL 222
DFG + +++ + GTY +M PE ++ + ++ K D++S G+ L
Sbjct: 195 DFGESEYMVDKKIKGSR----GTYEFMPPEFFSNESSYNGAKVDIWSLGICL 242
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 98/201 (48%), Gaps = 30/201 (14%)
Query: 55 KLGEGGFGPVYKG--------------VLKN-GDEIAVKRLSGRSGQGLRELKNK--LRL 97
+LG G FG V KG +LKN ++ A+K +++L N +R+
Sbjct: 24 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 83
Query: 98 LGCCIDKDEKILIYEYMPNKSLDFFLFD--WVTRVRIIEGIAQ---GLLYLHQYSRVRII 152
+G C + + +L+ E L+ +L V IIE + Q G+ YL + + +
Sbjct: 84 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESN---FV 139
Query: 153 HRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTY--RYMSPEYAIQGIFS 210
HRDL N+LL KISDFG+++ R +E + G + ++ +PE FS
Sbjct: 140 HRDLAARNVLLVTQHYAKISDFGLSKALRADE-NYYKAQTHGKWPVKWYAPECINYYKFS 198
Query: 211 IKSDVFSFGVLLLKIVS-GKK 230
KSDV+SFGVL+ + S G+K
Sbjct: 199 SKSDVWSFGVLMWEAFSYGQK 219
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
Query: 151 IIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFS 210
++HRDLK +N+ LD N K+ DFG+ARI N + VGT YMSPE + ++
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARIL--NHDTSFAKAFVGTPYYMSPEQMNRMSYN 194
Query: 211 IKSDVFSFGVLLLKIVS 227
KSD++S G LL ++ +
Sbjct: 195 EKSDIWSLGCLLYELCA 211
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 98/201 (48%), Gaps = 30/201 (14%)
Query: 55 KLGEGGFGPVYKG--------------VLKN-GDEIAVKRLSGRSGQGLRELKNK--LRL 97
+LG G FG V KG +LKN ++ A+K +++L N +R+
Sbjct: 14 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 73
Query: 98 LGCCIDKDEKILIYEYMPNKSLDFFLFD--WVTRVRIIEGIAQ---GLLYLHQYSRVRII 152
+G C + + +L+ E L+ +L V IIE + Q G+ YL + + +
Sbjct: 74 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESN---FV 129
Query: 153 HRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTY--RYMSPEYAIQGIFS 210
HRDL N+LL KISDFG+++ R +E + G + ++ +PE FS
Sbjct: 130 HRDLAARNVLLVTQHYAKISDFGLSKALRADE-NYYKAQTHGKWPVKWYAPECINYYKFS 188
Query: 211 IKSDVFSFGVLLLKIVS-GKK 230
KSDV+SFGVL+ + S G+K
Sbjct: 189 SKSDVWSFGVLMWEAFSYGQK 209
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 103/247 (41%), Gaps = 65/247 (26%)
Query: 31 EVDQLPLFSFSSVSTATNKFSDANKLGEGGFGPVY--------KGVLKNGDEIAVKRL-S 81
E+ + P + F +K + LGEG FG V K K +AVK L
Sbjct: 23 ELPEDPKWEFPR-----DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD 77
Query: 82 GRSGQGLREL-------------KNKLRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVT 128
+ + L +L KN + LLG C +I EY +L +L
Sbjct: 78 DATEEDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL----- 132
Query: 129 RVRIIEG--------------------------IAQGLLYLHQYSRVRIIHRDLKVSNIL 162
R R G +A+G+ YL + + IHRDL N+L
Sbjct: 133 RARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVL 189
Query: 163 LDKDMNPKISDFGIARICRGNELQANT--GRIVGTYRYMSPEYAIQGIFSIKSDVFSFGV 220
+ ++ KI+DFG+AR + T GR+ ++M+PE +++ +SDV+SFGV
Sbjct: 190 VTENNVMKIADFGLARDINNIDYYKKTTNGRL--PVKWMAPEALFDRVYTHQSDVWSFGV 247
Query: 221 LLLKIVS 227
L+ +I +
Sbjct: 248 LMWEIFT 254
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 96/202 (47%), Gaps = 40/202 (19%)
Query: 56 LGEGGFGPVYKGV-LKNGDEI----AVKRLSGRSGQ-------------GLRELKNKLRL 97
LG G FG V+KGV + G+ I +K + +SG+ G + + +RL
Sbjct: 39 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 98
Query: 98 LGCCIDKDEKILIYEYMPNKSL------------DFFLFDWVTRVRIIEGIAQGLLYLHQ 145
LG C + L+ +Y+P SL L +W + IA+G+ YL +
Sbjct: 99 LGLCPGSSLQ-LVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQ------IAKGMYYLEE 151
Query: 146 YSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAI 205
+ ++HR+L N+LL +++DFG+A + ++ Q ++M+ E
Sbjct: 152 HG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIH 208
Query: 206 QGIFSIKSDVFSFGVLLLKIVS 227
G ++ +SDV+S+GV + ++++
Sbjct: 209 FGKYTHQSDVWSYGVTVWELMT 230
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 98/200 (49%), Gaps = 27/200 (13%)
Query: 50 FSDANKLGEGGFGPVYKGVLK-NGDEIAVKRL------SGRSGQGLREL--------KNK 94
F K+GEG +G VYK K G+ +A+K++ G +RE+ N
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 95 LRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTRVRI------IEGIAQGLLYLHQYSR 148
++LL +++ L++E++ F +T + + + + QGL + H +
Sbjct: 68 VKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 125
Query: 149 VRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQ-G 207
R++HRDLK N+L++ + K++DFG+AR G ++ +V T Y +PE +
Sbjct: 126 -RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVV-TLWYRAPEILLGCK 182
Query: 208 IFSIKSDVFSFGVLLLKIVS 227
+S D++S G + ++V+
Sbjct: 183 YYSTAVDIWSLGCIFAEMVT 202
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 96/202 (47%), Gaps = 40/202 (19%)
Query: 56 LGEGGFGPVYKGV-LKNGDEI----AVKRLSGRSGQ-------------GLRELKNKLRL 97
LG G FG V+KGV + G+ I +K + +SG+ G + + +RL
Sbjct: 21 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 80
Query: 98 LGCCIDKDEKILIYEYMPNKSL------------DFFLFDWVTRVRIIEGIAQGLLYLHQ 145
LG C + L+ +Y+P SL L +W + IA+G+ YL +
Sbjct: 81 LGLCPGSSLQ-LVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQ------IAKGMYYLEE 133
Query: 146 YSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAI 205
+ ++HR+L N+LL +++DFG+A + ++ Q ++M+ E
Sbjct: 134 HG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIH 190
Query: 206 QGIFSIKSDVFSFGVLLLKIVS 227
G ++ +SDV+S+GV + ++++
Sbjct: 191 FGKYTHQSDVWSYGVTVWELMT 212
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 97/236 (41%), Gaps = 43/236 (18%)
Query: 46 ATNKFSDANKLGEGGFGPVYKGVLKNGDEI-AVKRL-------SGRSGQGLRELK----- 92
A F LG+G FG VY K I A+K L +G Q RE++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 93 ---NKLRLLGCCIDKDEKILIYEYMPNKSLDFFL-----FDWVTRVRIIEGIAQGLLYLH 144
N LRL G D LI EY P ++ L FD I +A L Y H
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 130
Query: 145 QYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGR---IVGTYRYMSP 201
R+IHRD+K N+LL KI+DFG + + A + R + GT Y+ P
Sbjct: 131 S---KRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTTLCGTLDYLPP 180
Query: 202 EYAIQGIFSIKSDVFSFGVLLLKIVSGK---KTTGFYRTY------SFTLLGYISE 248
E K D++S GVL + + GK + + TY FT +++E
Sbjct: 181 EXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 236
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 51/100 (51%), Gaps = 19/100 (19%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIA-RICRGNELQANTGRIVG 194
I + Y HQ RI+HRDLK N+LLD DMN KI+DFG + G +L G
Sbjct: 120 IVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFCG---- 172
Query: 195 TYRYMSPEYAIQGIFSIKS------DVFSFGVLLLKIVSG 228
SP YA +F K DV+S GV+L +VSG
Sbjct: 173 -----SPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 207
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 98/236 (41%), Gaps = 43/236 (18%)
Query: 46 ATNKFSDANKLGEGGFGPVYKGVLKNGDEI-AVKRL-------SGRSGQGLRELK----- 92
A F LG+G FG VY K I A+K L +G Q RE++
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 93 ---NKLRLLGCCIDKDEKILIYEYMPNKSLDFFL-----FDWVTRVRIIEGIAQGLLYLH 144
N LRL G D LI EY P ++ L FD I +A L Y H
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 122
Query: 145 QYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGR---IVGTYRYMSP 201
R+IHRD+K N+LL KI+DFG + + A + R + GT Y+ P
Sbjct: 123 S---KRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTTLCGTLDYLPP 172
Query: 202 EYAIQGIFSIKSDVFSFGVLLLKIVSGK---KTTGFYRTY------SFTLLGYISE 248
E + K D++S GVL + + GK + + TY FT +++E
Sbjct: 173 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 228
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 98/201 (48%), Gaps = 30/201 (14%)
Query: 55 KLGEGGFGPVYKG--------------VLKN-GDEIAVKRLSGRSGQGLRELKNK--LRL 97
+LG G FG V KG +LKN ++ A+K +++L N +R+
Sbjct: 12 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 71
Query: 98 LGCCIDKDEKILIYEYMPNKSLDFFLFD--WVTRVRIIEGIAQ---GLLYLHQYSRVRII 152
+G C + + +L+ E L+ +L V IIE + Q G+ YL + + +
Sbjct: 72 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESN---FV 127
Query: 153 HRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTY--RYMSPEYAIQGIFS 210
HRDL N+LL KISDFG+++ R +E + G + ++ +PE FS
Sbjct: 128 HRDLAARNVLLVTQHYAKISDFGLSKALRADE-NYYKAQTHGKWPVKWYAPECINYYKFS 186
Query: 211 IKSDVFSFGVLLLKIVS-GKK 230
KSDV+SFGVL+ + S G+K
Sbjct: 187 SKSDVWSFGVLMWEAFSYGQK 207
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 95/197 (48%), Gaps = 29/197 (14%)
Query: 55 KLGEGGFGPVYKG--------------VLKN-GDEIAVKRLSGRSGQGLRELKNK--LRL 97
+LG G FG V KG +LKN ++ A+K +++L N +R+
Sbjct: 376 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 435
Query: 98 LGCCIDKDEKILIYEYMPNKSLDFFLFD--WVTRVRIIEGIAQ---GLLYLHQYSRVRII 152
+G C + + +L+ E L+ +L V IIE + Q G+ YL + + +
Sbjct: 436 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESN---FV 491
Query: 153 HRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTY--RYMSPEYAIQGIFS 210
HRDL N+LL KISDFG+++ R +E + G + ++ +PE FS
Sbjct: 492 HRDLAARNVLLVTQHYAKISDFGLSKALRADE-NYYKAQTHGKWPVKWYAPECINYYKFS 550
Query: 211 IKSDVFSFGVLLLKIVS 227
KSDV+SFGVL+ + S
Sbjct: 551 SKSDVWSFGVLMWEAFS 567
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 94/222 (42%), Gaps = 51/222 (22%)
Query: 50 FSDANKLGEGGFGPVYKGVLK-NGDEIAVKRLSGRSGQGLRELKNKLRL-------LGCC 101
F + +G GGFG V+K + +G ++R+ + + RE+K +L C
Sbjct: 14 FKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAEREVKALAKLDHVNIVHYNGC 73
Query: 102 ID--------KDEKILIYEYMPNKS--------------LDFF----LFDWVTRVR---- 131
D D+ + +Y P S ++F L W+ + R
Sbjct: 74 WDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKL 133
Query: 132 -------IIEGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNE 184
+ E I +G+ Y+H ++IHRDLK SNI L KI DFG+ + +
Sbjct: 134 DKVLALELFEQITKGVDYIHSK---KLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKND- 189
Query: 185 LQANTGRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIV 226
R GT RYMSPE + + D+++ G++L +++
Sbjct: 190 --GKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 98/201 (48%), Gaps = 30/201 (14%)
Query: 55 KLGEGGFGPVYKG--------------VLKN-GDEIAVKRLSGRSGQGLRELKNK--LRL 97
+LG G FG V KG +LKN ++ A+K +++L N +R+
Sbjct: 18 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 77
Query: 98 LGCCIDKDEKILIYEYMPNKSLDFFLFD--WVTRVRIIEGIAQ---GLLYLHQYSRVRII 152
+G C + + +L+ E L+ +L V IIE + Q G+ YL + + +
Sbjct: 78 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESN---FV 133
Query: 153 HRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTY--RYMSPEYAIQGIFS 210
HRDL N+LL KISDFG+++ R +E + G + ++ +PE FS
Sbjct: 134 HRDLAARNVLLVTQHYAKISDFGLSKALRADE-NYYKAQTHGKWPVKWYAPECINYYKFS 192
Query: 211 IKSDVFSFGVLLLKIVS-GKK 230
KSDV+SFGVL+ + S G+K
Sbjct: 193 SKSDVWSFGVLMWEAFSYGQK 213
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGT 195
I GL +LHQ + II+RDLK N+LLD D N +ISD G+A + Q T GT
Sbjct: 298 IVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAG--QTKTKGYAGT 352
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGK 229
+M+PE + + D F+ GV L ++++ +
Sbjct: 353 PGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 57/95 (60%), Gaps = 6/95 (6%)
Query: 135 GIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVG 194
+ +GL YL + + +I+HRD+K SNIL++ K+ DFG++ G + + VG
Sbjct: 174 AVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVG 227
Query: 195 TYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGK 229
T YMSPE +S++SD++S G+ L+++ G+
Sbjct: 228 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 262
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 91/194 (46%), Gaps = 23/194 (11%)
Query: 55 KLGEGGFGPVYKGVLKN-GDEIAVKRLSGRSGQGLRELKNKLRLLGCCID---------- 103
+LG+G FG VYK K G A K + +S + L + ++ +L C
Sbjct: 18 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 77
Query: 104 -KDEKILIY-EYMPNKSLDFFLFDW---VTRVRIIEGIAQGLLYLHQYSRVRIIHRDLKV 158
D K+ I E+ P ++D + + +T +I Q L L+ RIIHRDLK
Sbjct: 78 YHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKA 137
Query: 159 SNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAI-----QGIFSIKS 213
N+L+ + + +++DFG++ + + +GT +M+PE + + K+
Sbjct: 138 GNVLMTLEGDIRLADFGVS--AKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKA 195
Query: 214 DVFSFGVLLLKIVS 227
D++S G+ L+++
Sbjct: 196 DIWSLGITLIEMAQ 209
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 103/247 (41%), Gaps = 65/247 (26%)
Query: 31 EVDQLPLFSFSSVSTATNKFSDANKLGEGGFGPVY--------KGVLKNGDEIAVKRLSG 82
E+ + P + F +K + LGEG FG V K K +AVK L
Sbjct: 23 ELPEDPKWEFPR-----DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD 77
Query: 83 RSGQ-GLREL-------------KNKLRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVT 128
+ + L +L KN + LLG C +I EY +L +L
Sbjct: 78 DATEKDLSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYL----- 132
Query: 129 RVRIIEG--------------------------IAQGLLYLHQYSRVRIIHRDLKVSNIL 162
R R G +A+G+ YL + + IHRDL N+L
Sbjct: 133 RARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVL 189
Query: 163 LDKDMNPKISDFGIARICRGNELQANT--GRIVGTYRYMSPEYAIQGIFSIKSDVFSFGV 220
+ ++ KI+DFG+AR + T GR+ ++M+PE +++ +SDV+SFGV
Sbjct: 190 VTENNVMKIADFGLARDINNIDYYKKTTNGRL--PVKWMAPEALFDRVYTHQSDVWSFGV 247
Query: 221 LLLKIVS 227
L+ +I +
Sbjct: 248 LMWEIFT 254
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGT 195
I GL +LHQ + II+RDLK N+LLD D N +ISD G+A + Q T GT
Sbjct: 298 IVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAG--QTKTKGYAGT 352
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGK 229
+M+PE + + D F+ GV L ++++ +
Sbjct: 353 PGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGT 195
I GL +LHQ + II+RDLK N+LLD D N +ISD G+A + Q T GT
Sbjct: 298 IVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAG--QTKTKGYAGT 352
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGK 229
+M+PE + + D F+ GV L ++++ +
Sbjct: 353 PGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 93/201 (46%), Gaps = 30/201 (14%)
Query: 55 KLGEGGFGPVYKGV--------------LKNGDEIAVKRLSGRSGQGLRELKNK--LRLL 98
+LG G FG V +GV LK G E A R Q + +L N +RL+
Sbjct: 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 402
Query: 99 GCCIDKDEKILIYEYMPNKSLDFFLFDWVTRV------RIIEGIAQGLLYLHQYSRVRII 152
G C + +L+ E L FL + ++ ++ G+ YL + + +
Sbjct: 403 GVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKN---FV 458
Query: 153 HRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTY--RYMSPEYAIQGIFS 210
HR+L N+LL KISDFG+++ G + T R G + ++ +PE FS
Sbjct: 459 HRNLAARNVLLVNRHYAKISDFGLSKAL-GADDSYYTARSAGKWPLKWYAPECINFRKFS 517
Query: 211 IKSDVFSFGVLLLKIVS-GKK 230
+SDV+S+GV + + +S G+K
Sbjct: 518 SRSDVWSYGVTMWEALSYGQK 538
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 95/197 (48%), Gaps = 29/197 (14%)
Query: 55 KLGEGGFGPVYKG--------------VLKN-GDEIAVKRLSGRSGQGLRELKNK--LRL 97
+LG G FG V KG +LKN ++ A+K +++L N +R+
Sbjct: 377 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 436
Query: 98 LGCCIDKDEKILIYEYMPNKSLDFFLFD--WVTRVRIIEGIAQ---GLLYLHQYSRVRII 152
+G C + + +L+ E L+ +L V IIE + Q G+ YL + + +
Sbjct: 437 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESN---FV 492
Query: 153 HRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTY--RYMSPEYAIQGIFS 210
HRDL N+LL KISDFG+++ R +E + G + ++ +PE FS
Sbjct: 493 HRDLAARNVLLVTQHYAKISDFGLSKALRADE-NYYKAQTHGKWPVKWYAPECINYYKFS 551
Query: 211 IKSDVFSFGVLLLKIVS 227
KSDV+SFGVL+ + S
Sbjct: 552 SKSDVWSFGVLMWEAFS 568
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGT 195
I GL +LHQ + II+RDLK N+LLD D N +ISD G+A + Q T GT
Sbjct: 298 IVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAG--QTKTKGYAGT 352
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGK 229
+M+PE + + D F+ GV L ++++ +
Sbjct: 353 PGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 91/194 (46%), Gaps = 23/194 (11%)
Query: 55 KLGEGGFGPVYKGVLKN-GDEIAVKRLSGRSGQGLRELKNKLRLLGCCID---------- 103
+LG+G FG VYK K G A K + +S + L + ++ +L C
Sbjct: 26 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 85
Query: 104 -KDEKILIY-EYMPNKSLDFFLFDW---VTRVRIIEGIAQGLLYLHQYSRVRIIHRDLKV 158
D K+ I E+ P ++D + + +T +I Q L L+ RIIHRDLK
Sbjct: 86 YHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKA 145
Query: 159 SNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAI-----QGIFSIKS 213
N+L+ + + +++DFG++ + + +GT +M+PE + + K+
Sbjct: 146 GNVLMTLEGDIRLADFGVS--AKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKA 203
Query: 214 DVFSFGVLLLKIVS 227
D++S G+ L+++
Sbjct: 204 DIWSLGITLIEMAQ 217
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 90/222 (40%), Gaps = 48/222 (21%)
Query: 48 NKFSDANKLGEGGFGPVYKGV---LKNGD---EIAVKRLSGRSGQGLREL---------- 91
N LG G FG V + L D ++AVK L + +E
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 92 ----KNKLRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTRVRIIE------------- 134
+N + LLG C ++I EY L FL + R++E
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFL---RRKSRVLETDPAFAIANSTAS 162
Query: 135 ---------GIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNEL 185
+AQG+ +L + IHRD+ N+LL KI DFG+AR +
Sbjct: 163 TRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN 219
Query: 186 QANTGRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVS 227
G ++M+PE +++++SDV+S+G+LL +I S
Sbjct: 220 YIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 57/95 (60%), Gaps = 6/95 (6%)
Query: 135 GIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVG 194
+ +GL YL + + +I+HRD+K SNIL++ K+ DFG++ G + + VG
Sbjct: 112 AVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVG 165
Query: 195 TYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGK 229
T YMSPE +S++SD++S G+ L+++ G+
Sbjct: 166 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 57/95 (60%), Gaps = 6/95 (6%)
Query: 135 GIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVG 194
+ +GL YL + + +I+HRD+K SNIL++ K+ DFG++ G + + VG
Sbjct: 139 AVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVG 192
Query: 195 TYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGK 229
T YMSPE +S++SD++S G+ L+++ G+
Sbjct: 193 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 227
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 51/100 (51%), Gaps = 19/100 (19%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIA-RICRGNELQANTGRIVG 194
I + Y HQ I+HRDLK N+LLD DMN KI+DFG + GN+L G
Sbjct: 123 IVSAVQYCHQKY---IVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFCG---- 175
Query: 195 TYRYMSPEYAIQGIFSIKS------DVFSFGVLLLKIVSG 228
SP YA +F K DV+S GV+L +VSG
Sbjct: 176 -----SPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 210
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 101/214 (47%), Gaps = 37/214 (17%)
Query: 46 ATNKFSDANKLGEGGFGPVYKGV-LKNGDEIAVKRLSGRSGQG------------LRELK 92
AT+++ ++G G +G VYK +G +A+K + +G+ LR L+
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 93 -----NKLRLLGCC----IDKDEKI-LIYEYMPNKSLDFFL-------FDWVTRVRIIEG 135
N +RL+ C D++ K+ L++E++ ++ L +L T ++
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGT 195
+GL +LH I+HRDLK NIL+ K++DFG+ARI Q +V T
Sbjct: 121 FLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI---YSYQMALDPVVVT 174
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGK 229
Y +PE +Q ++ D++S G + ++ K
Sbjct: 175 LWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 51/100 (51%), Gaps = 19/100 (19%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIA-RICRGNELQANTGRIVG 194
I + Y HQ I+HRDLK N+LLD DMN KI+DFG + GN+L G
Sbjct: 115 IVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCG---- 167
Query: 195 TYRYMSPEYAIQGIFSIKS------DVFSFGVLLLKIVSG 228
SP YA +F K DV+S GV+L +VSG
Sbjct: 168 -----SPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 202
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 104/246 (42%), Gaps = 43/246 (17%)
Query: 47 TNKFSD----ANKLGEGGFGPVYKGVLKN-GDEIAVK-----RLSGRSGQGLRELKNKLR 96
+ KFSD +LG+G F V + V K G E A K +LS R Q L R
Sbjct: 1 STKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICR 60
Query: 97 LLGCCIDKDEKILIYEYMPNKSLDFFLFDWVT------------------RVRIIEGIAQ 138
L + +++ + +S + +FD VT I+ I +
Sbjct: 61 KL----QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILE 116
Query: 139 GLLYLHQYSRVRIIHRDLKVSNILLD---KDMNPKISDFGIARICRGNELQANTGRIVGT 195
+ Y H I+HR+LK N+LL K K++DFG+A N+ +A G GT
Sbjct: 117 SIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHG-FAGT 170
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGKKTTGFYRTYSFTLLGYISENIYEFPS 255
Y+SPE + +S D+++ GV+L ++ G F+ L I Y++PS
Sbjct: 171 PGYLSPEVLKKDPYSKPVDIWACGVILYILLVG--YPPFWDEDQHRLYAQIKAGAYDYPS 228
Query: 256 VDTHNV 261
+ V
Sbjct: 229 PEWDTV 234
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 57/95 (60%), Gaps = 6/95 (6%)
Query: 135 GIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVG 194
+ +GL YL + + +I+HRD+K SNIL++ K+ DFG++ G + + VG
Sbjct: 112 AVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVG 165
Query: 195 TYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGK 229
T YMSPE +S++SD++S G+ L+++ G+
Sbjct: 166 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 90/222 (40%), Gaps = 48/222 (21%)
Query: 48 NKFSDANKLGEGGFGPVYKGV---LKNGD---EIAVKRLSGRSGQGLREL---------- 91
N LG G FG V + L D ++AVK L + +E
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 92 ----KNKLRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTRVRIIE------------- 134
+N + LLG C ++I EY L FL + R++E
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFL---RRKSRVLETDPAFAIANSTLS 162
Query: 135 ---------GIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNEL 185
+AQG+ +L + IHRD+ N+LL KI DFG+AR +
Sbjct: 163 TRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN 219
Query: 186 QANTGRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVS 227
G ++M+PE +++++SDV+S+G+LL +I S
Sbjct: 220 YIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 103/247 (41%), Gaps = 65/247 (26%)
Query: 31 EVDQLPLFSFSSVSTATNKFSDANKLGEGGFGPVY--------KGVLKNGDEIAVKRLSG 82
E+ + P + F +K + LGEG FG V K K +AVK L
Sbjct: 69 ELPEDPKWEFPR-----DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD 123
Query: 83 RSGQ-GLREL-------------KNKLRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVT 128
+ + L +L KN + LLG C +I EY +L +L
Sbjct: 124 DATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL----- 178
Query: 129 RVRIIEG--------------------------IAQGLLYLHQYSRVRIIHRDLKVSNIL 162
R R G +A+G+ YL + + IHRDL N+L
Sbjct: 179 RARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVL 235
Query: 163 LDKDMNPKISDFGIARICRGNELQANT--GRIVGTYRYMSPEYAIQGIFSIKSDVFSFGV 220
+ ++ KI+DFG+AR + T GR+ ++M+PE +++ +SDV+SFGV
Sbjct: 236 VTENNVMKIADFGLARDINNIDYYKKTTNGRL--PVKWMAPEALFDRVYTHQSDVWSFGV 293
Query: 221 LLLKIVS 227
L+ +I +
Sbjct: 294 LMWEIFT 300
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 101/218 (46%), Gaps = 34/218 (15%)
Query: 55 KLGEGGFGPVYKGVLKN-GDEIAVKRLSGRSGQGLREL-------------KNKLRLLGC 100
K+GEG G V +++ G +AVK++ R Q REL +N + +
Sbjct: 38 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR-RELLFNEVVIMRDYQHENVVEMYNS 96
Query: 101 CIDKDEKILIYEYMPNKSLDFFLFDWVTRVRIIE--------GIAQGLLYLHQYSRVRII 152
+ DE ++ E++ +L D VT R+ E + Q L LH +I
Sbjct: 97 YLVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VI 149
Query: 153 HRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIK 212
HRD+K +ILL D K+SDFG + ++ +VGT +M+PE + + +
Sbjct: 150 HRDIKSDSILLTHDGRVKLSDFGFC--AQVSKEVPRRKXLVGTPYWMAPELISRLPYGPE 207
Query: 213 SDVFSFGVLLLKIVSGKKTTGFYRTYSFTLLGYISENI 250
D++S G++++++V G+ ++ + I +N+
Sbjct: 208 VDIWSLGIMVIEMVDGEPP--YFNEPPLKAMKMIRDNL 243
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 51/100 (51%), Gaps = 19/100 (19%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIA-RICRGNELQANTGRIVG 194
I + Y HQ I+HRDLK N+LLD DMN KI+DFG + GN+L G
Sbjct: 122 IVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCG---- 174
Query: 195 TYRYMSPEYAIQGIFSIKS------DVFSFGVLLLKIVSG 228
SP YA +F K DV+S GV+L +VSG
Sbjct: 175 -----SPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 51/100 (51%), Gaps = 19/100 (19%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIA-RICRGNELQANTGRIVG 194
I + Y HQ I+HRDLK N+LLD DMN KI+DFG + GN+L G
Sbjct: 122 IVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCG---- 174
Query: 195 TYRYMSPEYAIQGIFSIKS------DVFSFGVLLLKIVSG 228
SP YA +F K DV+S GV+L +VSG
Sbjct: 175 -----SPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 101/218 (46%), Gaps = 34/218 (15%)
Query: 55 KLGEGGFGPVYKGVLKN-GDEIAVKRLSGRSGQGLREL-------------KNKLRLLGC 100
K+GEG G V +++ G +AVK++ R Q REL +N + +
Sbjct: 36 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR-RELLFNEVVIMRDYQHENVVEMYNS 94
Query: 101 CIDKDEKILIYEYMPNKSLDFFLFDWVTRVRIIE--------GIAQGLLYLHQYSRVRII 152
+ DE ++ E++ +L D VT R+ E + Q L LH +I
Sbjct: 95 YLVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VI 147
Query: 153 HRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIK 212
HRD+K +ILL D K+SDFG + ++ +VGT +M+PE + + +
Sbjct: 148 HRDIKSDSILLTHDGRVKLSDFGFC--AQVSKEVPRRKXLVGTPYWMAPELISRLPYGPE 205
Query: 213 SDVFSFGVLLLKIVSGKKTTGFYRTYSFTLLGYISENI 250
D++S G++++++V G+ ++ + I +N+
Sbjct: 206 VDIWSLGIMVIEMVDGEPP--YFNEPPLKAMKMIRDNL 241
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 51/100 (51%), Gaps = 19/100 (19%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIA-RICRGNELQANTGRIVG 194
I + Y HQ I+HRDLK N+LLD DMN KI+DFG + GN+L G
Sbjct: 122 IVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCG---- 174
Query: 195 TYRYMSPEYAIQGIFSIKS------DVFSFGVLLLKIVSG 228
SP YA +F K DV+S GV+L +VSG
Sbjct: 175 -----SPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 57/95 (60%), Gaps = 6/95 (6%)
Query: 135 GIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVG 194
+ +GL YL + + +I+HRD+K SNIL++ K+ DFG++ G + + VG
Sbjct: 112 AVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVG 165
Query: 195 TYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGK 229
T YMSPE +S++SD++S G+ L+++ G+
Sbjct: 166 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 101/218 (46%), Gaps = 34/218 (15%)
Query: 55 KLGEGGFGPVYKGVLKN-GDEIAVKRLSGRSGQGLREL-------------KNKLRLLGC 100
K+GEG G V +++ G +AVK++ R Q REL +N + +
Sbjct: 27 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR-RELLFNEVVIMRDYQHENVVEMYNS 85
Query: 101 CIDKDEKILIYEYMPNKSLDFFLFDWVTRVRIIE--------GIAQGLLYLHQYSRVRII 152
+ DE ++ E++ +L D VT R+ E + Q L LH +I
Sbjct: 86 YLVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VI 138
Query: 153 HRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIK 212
HRD+K +ILL D K+SDFG + ++ +VGT +M+PE + + +
Sbjct: 139 HRDIKSDSILLTHDGRVKLSDFGFC--AQVSKEVPRRKXLVGTPYWMAPELISRLPYGPE 196
Query: 213 SDVFSFGVLLLKIVSGKKTTGFYRTYSFTLLGYISENI 250
D++S G++++++V G+ ++ + I +N+
Sbjct: 197 VDIWSLGIMVIEMVDGEPP--YFNEPPLKAMKMIRDNL 232
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 58/93 (62%), Gaps = 2/93 (2%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGT 195
+A+ L L + II+RDLK NILLD++ + K++DFG+++ +E +A + GT
Sbjct: 132 LAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS--FCGT 189
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
YM+PE + + +D +SFGVL+ ++++G
Sbjct: 190 VEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 66/123 (53%), Gaps = 9/123 (7%)
Query: 135 GIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVG 194
+ +GL YL + + +I+HRD+K SNIL++ K+ DFG++ G + VG
Sbjct: 115 AVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDEMANEFVG 168
Query: 195 TYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGKKTTGFYRTYSFTLLGYI-SENIYEF 253
T YMSPE +S++SD++S G+ L+++ G+ F LL YI +E +
Sbjct: 169 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPRPPMAI--FELLDYIVNEPPPKL 226
Query: 254 PSV 256
PS
Sbjct: 227 PSA 229
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 98/236 (41%), Gaps = 43/236 (18%)
Query: 46 ATNKFSDANKLGEGGFGPVYKGVLKNGDEI-AVKRL-------SGRSGQGLRELK----- 92
A F LG+G FG VY K I A+K L +G Q RE++
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 93 ---NKLRLLGCCIDKDEKILIYEYMPNKSLDFFL-----FDWVTRVRIIEGIAQGLLYLH 144
N LRL G D LI EY P ++ L FD I +A L Y H
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 127
Query: 145 QYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGR---IVGTYRYMSP 201
R+IHRD+K N+LL KI++FG + + A + R + GT Y+ P
Sbjct: 128 S---KRVIHRDIKPENLLLGSAGELKIANFGWS-------VHAPSSRRTTLCGTLDYLPP 177
Query: 202 EYAIQGIFSIKSDVFSFGVLLLKIVSGK---KTTGFYRTY------SFTLLGYISE 248
E + K D++S GVL + + GK + + TY FT +++E
Sbjct: 178 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 233
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 101/218 (46%), Gaps = 34/218 (15%)
Query: 55 KLGEGGFGPVYKGVLKN-GDEIAVKRLSGRSGQGLREL-------------KNKLRLLGC 100
K+GEG G V +++ G +AVK++ R Q REL +N + +
Sbjct: 31 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR-RELLFNEVVIMRDYQHENVVEMYNS 89
Query: 101 CIDKDEKILIYEYMPNKSLDFFLFDWVTRVRIIE--------GIAQGLLYLHQYSRVRII 152
+ DE ++ E++ +L D VT R+ E + Q L LH +I
Sbjct: 90 YLVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VI 142
Query: 153 HRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIK 212
HRD+K +ILL D K+SDFG + ++ +VGT +M+PE + + +
Sbjct: 143 HRDIKSDSILLTHDGRVKLSDFGFC--AQVSKEVPRRKXLVGTPYWMAPELISRLPYGPE 200
Query: 213 SDVFSFGVLLLKIVSGKKTTGFYRTYSFTLLGYISENI 250
D++S G++++++V G+ ++ + I +N+
Sbjct: 201 VDIWSLGIMVIEMVDGEPP--YFNEPPLKAMKMIRDNL 236
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 57/95 (60%), Gaps = 6/95 (6%)
Query: 135 GIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVG 194
+ +GL YL + + +I+HRD+K SNIL++ K+ DFG++ G + + VG
Sbjct: 112 AVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVG 165
Query: 195 TYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGK 229
T YMSPE +S++SD++S G+ L+++ G+
Sbjct: 166 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 104/246 (42%), Gaps = 43/246 (17%)
Query: 47 TNKFSD----ANKLGEGGFGPVYKGVLKN-GDEIAVK-----RLSGRSGQGLRELKNKLR 96
+ KFSD +LG+G F V + V K G E A K +LS R Q L R
Sbjct: 1 STKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICR 60
Query: 97 LLGCCIDKDEKILIYEYMPNKSLDFFLFDWVT------------------RVRIIEGIAQ 138
L + +++ + +S + +FD VT I+ I +
Sbjct: 61 KL----QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILE 116
Query: 139 GLLYLHQYSRVRIIHRDLKVSNILLD---KDMNPKISDFGIARICRGNELQANTGRIVGT 195
+ Y H I+HR+LK N+LL K K++DFG+A N+ +A G GT
Sbjct: 117 SIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHG-FAGT 170
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGKKTTGFYRTYSFTLLGYISENIYEFPS 255
Y+SPE + +S D+++ GV+L ++ G F+ L I Y++PS
Sbjct: 171 PGYLSPEVLKKDPYSKPVDIWACGVILYILLVG--YPPFWDEDQHRLYAQIKAGAYDYPS 228
Query: 256 VDTHNV 261
+ V
Sbjct: 229 PEWDTV 234
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 57/95 (60%), Gaps = 6/95 (6%)
Query: 135 GIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVG 194
+ +GL YL + + +I+HRD+K SNIL++ K+ DFG++ G + + VG
Sbjct: 112 AVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVG 165
Query: 195 TYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGK 229
T YMSPE +S++SD++S G+ L+++ G+
Sbjct: 166 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 51/100 (51%), Gaps = 19/100 (19%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIA-RICRGNELQANTGRIVG 194
I + Y HQ I+HRDLK N+LLD DMN KI+DFG + GN+L G
Sbjct: 122 IVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEFCG---- 174
Query: 195 TYRYMSPEYAIQGIFSIKS------DVFSFGVLLLKIVSG 228
SP YA +F K DV+S GV+L +VSG
Sbjct: 175 -----SPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 94/209 (44%), Gaps = 35/209 (16%)
Query: 50 FSDANKLGEGGFGPVYKGVLK-NGDEIAVKRLSGRSGQGLRELKNKL------------- 95
D ++G G +G V K V K +G +AVKR+ RS +E K L
Sbjct: 24 LKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRI--RSTVDEKEQKQLLMDLDVVMRSSDCP 81
Query: 96 ---RLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTRVRIIEGIAQGLLYL-------HQ 145
+ G + + + E M F+ + + +I G + L H
Sbjct: 82 YIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHL 141
Query: 146 YSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQA-NTGRIVGTYRYMSPEY- 203
++IIHRD+K SNILLD+ N K+ DFGI+ G + + R G YM+PE
Sbjct: 142 KENLKIIHRDIKPSNILLDRSGNIKLCDFGIS----GQLVDSIAKTRDAGCRPYMAPERI 197
Query: 204 ---AIQGIFSIKSDVFSFGVLLLKIVSGK 229
A + + ++SDV+S G+ L ++ +G+
Sbjct: 198 DPSASRQGYDVRSDVWSLGITLYELATGR 226
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 101/218 (46%), Gaps = 34/218 (15%)
Query: 55 KLGEGGFGPVYKGVLKN-GDEIAVKRLSGRSGQGLREL-------------KNKLRLLGC 100
K+GEG G V +++ G +AVK++ R Q REL +N + +
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ-RRELLFNEVVIMRDYQHENVVEMYNS 216
Query: 101 CIDKDEKILIYEYMPNKSLDFFLFDWVTRVRIIE--------GIAQGLLYLHQYSRVRII 152
+ DE ++ E++ +L D VT R+ E + Q L LH +I
Sbjct: 217 YLVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VI 269
Query: 153 HRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIK 212
HRD+K +ILL D K+SDFG + ++ +VGT +M+PE + + +
Sbjct: 270 HRDIKSDSILLTHDGRVKLSDFGFC--AQVSKEVPRRKXLVGTPYWMAPELISRLPYGPE 327
Query: 213 SDVFSFGVLLLKIVSGKKTTGFYRTYSFTLLGYISENI 250
D++S G++++++V G+ ++ + I +N+
Sbjct: 328 VDIWSLGIMVIEMVDGEPP--YFNEPPLKAMKMIRDNL 363
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 74/141 (52%), Gaps = 12/141 (8%)
Query: 124 FDWVTRVRIIEGIAQGLLYLHQYSRVRIIHRDLKVSNILL---DKDMNPKISDFGIARIC 180
F+ V II+ + G+ YLH+++ I+HRDLK N+LL +KD KI DFG++ +
Sbjct: 133 FNEVDAAVIIKQVLSGVTYLHKHN---IVHRDLKPENLLLESKEKDALIKIVDFGLSAVF 189
Query: 181 RGNELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGKKTTGFYRTYSF 240
E Q +GT Y++PE ++ + K DV+S GV+L +++G G
Sbjct: 190 ---ENQKKMKERLGTAYYIAPE-VLRKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQE- 244
Query: 241 TLLGYISENIYEFPSVDTHNV 261
+L + + Y F S + NV
Sbjct: 245 -ILRKVEKGKYTFDSPEWKNV 264
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 103/244 (42%), Gaps = 43/244 (17%)
Query: 49 KFSD----ANKLGEGGFGPVYKGVLKN-GDEIAVK-----RLSGRSGQGLRELKNKLRLL 98
KFSD +LG+G F V + V K G E A K +LS R Q L R L
Sbjct: 2 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL 61
Query: 99 GCCIDKDEKILIYEYMPNKSLDFFLFDWVT------------------RVRIIEGIAQGL 140
+ +++ + +S + +FD VT I+ I + +
Sbjct: 62 ----QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESI 117
Query: 141 LYLHQYSRVRIIHRDLKVSNILLD---KDMNPKISDFGIARICRGNELQANTGRIVGTYR 197
Y H I+HR+LK N+LL K K++DFG+A N+ +A G GT
Sbjct: 118 AYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHG-FAGTPG 171
Query: 198 YMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGKKTTGFYRTYSFTLLGYISENIYEFPSVD 257
Y+SPE + +S D+++ GV+L ++ G F+ L I Y++PS +
Sbjct: 172 YLSPEVLKKDPYSKPVDIWACGVILYILLVG--YPPFWDEDQHRLYAQIKAGAYDYPSPE 229
Query: 258 THNV 261
V
Sbjct: 230 WDTV 233
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 103/247 (41%), Gaps = 65/247 (26%)
Query: 31 EVDQLPLFSFSSVSTATNKFSDANKLGEGGFGPVY--------KGVLKNGDEIAVKRLSG 82
E+ + P + F +K + LGEG FG V K K +AVK L
Sbjct: 15 ELPEDPKWEFPR-----DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD 69
Query: 83 RSGQ-GLREL-------------KNKLRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVT 128
+ + L +L KN + LLG C +I EY +L +L
Sbjct: 70 DATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL----- 124
Query: 129 RVRIIEG--------------------------IAQGLLYLHQYSRVRIIHRDLKVSNIL 162
R R G +A+G+ YL + + IHRDL N+L
Sbjct: 125 RARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVL 181
Query: 163 LDKDMNPKISDFGIARICRGNELQANT--GRIVGTYRYMSPEYAIQGIFSIKSDVFSFGV 220
+ ++ KI+DFG+AR + T GR+ ++M+PE +++ +SDV+SFGV
Sbjct: 182 VTENNVMKIADFGLARDINNIDYYKKTTNGRL--PVKWMAPEALFDRVYTHQSDVWSFGV 239
Query: 221 LLLKIVS 227
L+ +I +
Sbjct: 240 LMWEIFT 246
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 98/236 (41%), Gaps = 43/236 (18%)
Query: 46 ATNKFSDANKLGEGGFGPVYKGVLKNGDEI-AVKRL-------SGRSGQGLRELK----- 92
A F LG+G FG VY K I A+K L +G Q RE++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 93 ---NKLRLLGCCIDKDEKILIYEYMPNKSLDFFL-----FDWVTRVRIIEGIAQGLLYLH 144
N LRL G D LI EY P ++ L FD I +A L Y H
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 145 QYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGR---IVGTYRYMSP 201
R+IHRD+K N+LL KI++FG + + A + R + GT Y+ P
Sbjct: 129 S---KRVIHRDIKPENLLLGSAGELKIANFGWS-------VHAPSSRRTTLCGTLDYLPP 178
Query: 202 EYAIQGIFSIKSDVFSFGVLLLKIVSGK---KTTGFYRTY------SFTLLGYISE 248
E + K D++S GVL + + GK + + TY FT +++E
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 234
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 103/247 (41%), Gaps = 65/247 (26%)
Query: 31 EVDQLPLFSFSSVSTATNKFSDANKLGEGGFGPVY--------KGVLKNGDEIAVKRLSG 82
E+ + P + F +K + LGEG FG V K K +AVK L
Sbjct: 10 ELPEDPKWEFPR-----DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD 64
Query: 83 RSGQ-GLREL-------------KNKLRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVT 128
+ + L +L KN + LLG C +I EY +L +L
Sbjct: 65 DATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL----- 119
Query: 129 RVRIIEG--------------------------IAQGLLYLHQYSRVRIIHRDLKVSNIL 162
R R G +A+G+ YL + + IHRDL N+L
Sbjct: 120 RARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLTARNVL 176
Query: 163 LDKDMNPKISDFGIARICRGNELQANT--GRIVGTYRYMSPEYAIQGIFSIKSDVFSFGV 220
+ ++ KI+DFG+AR + T GR+ ++M+PE +++ +SDV+SFGV
Sbjct: 177 VTENNVMKIADFGLARDINNIDYYKKTTNGRL--PVKWMAPEALFDRVYTHQSDVWSFGV 234
Query: 221 LLLKIVS 227
L+ +I +
Sbjct: 235 LMWEIFT 241
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 103/247 (41%), Gaps = 65/247 (26%)
Query: 31 EVDQLPLFSFSSVSTATNKFSDANKLGEGGFGPVY--------KGVLKNGDEIAVKRLSG 82
E+ + P + F +K + LGEG FG V K K +AVK L
Sbjct: 23 ELPEDPKWEFPR-----DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD 77
Query: 83 RSGQ-GLREL-------------KNKLRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVT 128
+ + L +L KN + LLG C +I EY +L +L
Sbjct: 78 DATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL----- 132
Query: 129 RVRIIEG--------------------------IAQGLLYLHQYSRVRIIHRDLKVSNIL 162
R R G +A+G+ YL + + IHRDL N+L
Sbjct: 133 RARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVL 189
Query: 163 LDKDMNPKISDFGIARICRGNELQANT--GRIVGTYRYMSPEYAIQGIFSIKSDVFSFGV 220
+ ++ +I+DFG+AR + T GR+ ++M+PE +++ +SDV+SFGV
Sbjct: 190 VTENNVMRIADFGLARDINNIDYYKKTTNGRL--PVKWMAPEALFDRVYTHQSDVWSFGV 247
Query: 221 LLLKIVS 227
L+ +I +
Sbjct: 248 LMWEIFT 254
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 66/125 (52%), Gaps = 19/125 (15%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGR---I 192
I G YLH R R+IHRDLK+ N+ L++D+ KI DFG+A +++ + R +
Sbjct: 148 IVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLA-----TKVEYDGERKKVL 199
Query: 193 VGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGK---KTTGFYRTYSFTLLGYISEN 249
GT Y++PE + S + DV+S G ++ ++ GK +T+ TY I +N
Sbjct: 200 CGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYL-----RIKKN 254
Query: 250 IYEFP 254
Y P
Sbjct: 255 EYSIP 259
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 58/93 (62%), Gaps = 2/93 (2%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGT 195
+A+ L L + II+RDLK NILLD++ + K++DFG+++ +E +A + GT
Sbjct: 133 LAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS--FCGT 190
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
YM+PE + + +D +SFGVL+ ++++G
Sbjct: 191 VEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 223
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 58/93 (62%), Gaps = 2/93 (2%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGT 195
+A+ L L + II+RDLK NILLD++ + K++DFG+++ +E +A + GT
Sbjct: 132 LAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS--FCGT 189
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
YM+PE + + +D +SFGVL+ ++++G
Sbjct: 190 VEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 101/214 (47%), Gaps = 37/214 (17%)
Query: 46 ATNKFSDANKLGEGGFGPVYKGV-LKNGDEIAVKRLSGRSGQG------------LRELK 92
AT+++ ++G G +G VYK +G +A+K + +G+ LR L+
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 93 -----NKLRLLGCC----IDKDEKI-LIYEYMPNKSLDFFL-------FDWVTRVRIIEG 135
N +RL+ C D++ K+ L++E++ ++ L +L T ++
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGT 195
+GL +LH I+HRDLK NIL+ K++DFG+ARI Q +V T
Sbjct: 121 FLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI---YSYQMALFPVVVT 174
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGK 229
Y +PE +Q ++ D++S G + ++ K
Sbjct: 175 LWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 66/125 (52%), Gaps = 19/125 (15%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGR---I 192
I G YLH R R+IHRDLK+ N+ L++D+ KI DFG+A +++ + R +
Sbjct: 150 IVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLA-----TKVEYDGERKKVL 201
Query: 193 VGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGK---KTTGFYRTYSFTLLGYISEN 249
GT Y++PE + S + DV+S G ++ ++ GK +T+ TY I +N
Sbjct: 202 CGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYL-----RIKKN 256
Query: 250 IYEFP 254
Y P
Sbjct: 257 EYSIP 261
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 100/228 (43%), Gaps = 40/228 (17%)
Query: 40 FSSVSTATNKFSDANKLGEGGFGPVYKGVLKNGD----EIAVKRLSG------------R 83
V +F+ LG+G FG V + LK D ++AVK L R
Sbjct: 15 LEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLR 74
Query: 84 SGQGLRELKNK--LRLLGCCIDKDEK------ILIYEYMPNKSLDFFLF----------- 124
++E + +L+G + K ++I +M + L FL
Sbjct: 75 EAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNL 134
Query: 125 DWVTRVRIIEGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIAR-ICRGN 183
T VR + IA G+ YL S IHRDL N +L +DM ++DFG++R I G+
Sbjct: 135 PLQTLVRFMVDIACGMEYL---SSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGD 191
Query: 184 ELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGKKT 231
+ + ++++ E ++++ SDV++FGV + +I++ +T
Sbjct: 192 YYRQGCASKLPV-KWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQT 238
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 103/247 (41%), Gaps = 65/247 (26%)
Query: 31 EVDQLPLFSFSSVSTATNKFSDANKLGEGGFGPVY--------KGVLKNGDEIAVKRLSG 82
E+ + P + F +K + LGEG FG V K K +AVK L
Sbjct: 12 ELPEDPKWEFPR-----DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD 66
Query: 83 RSGQ-GLREL-------------KNKLRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVT 128
+ + L +L KN + LLG C +I EY +L +L
Sbjct: 67 DATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL----- 121
Query: 129 RVRIIEG--------------------------IAQGLLYLHQYSRVRIIHRDLKVSNIL 162
R R G +A+G+ YL + + IHRDL N+L
Sbjct: 122 RARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVL 178
Query: 163 LDKDMNPKISDFGIARICRGNELQANT--GRIVGTYRYMSPEYAIQGIFSIKSDVFSFGV 220
+ ++ KI+DFG+AR + T GR+ ++M+PE +++ +SDV+SFGV
Sbjct: 179 VTENNVMKIADFGLARDINNIDYYKKTTNGRL--PVKWMAPEALFDRVYTHQSDVWSFGV 236
Query: 221 LLLKIVS 227
L+ +I +
Sbjct: 237 LMWEIFT 243
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 87/215 (40%), Gaps = 38/215 (17%)
Query: 48 NKFSDANKLGEGGFGPVYKGV---LKNGD---EIAVKRLSGRSGQGLREL---------- 91
N LG G FG V + L D ++AVK L + +E
Sbjct: 38 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 97
Query: 92 ----KNKLRLLGCCIDKDEKILIYEYMPNKSLDFFL---------------FDWVTRVRI 132
+N + LLG C ++I EY L FL + +
Sbjct: 98 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHF 157
Query: 133 IEGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRI 192
+AQG+ +L + IHRD+ N+LL KI DFG+AR + G
Sbjct: 158 SSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNA 214
Query: 193 VGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVS 227
++M+PE +++++SDV+S+G+LL +I S
Sbjct: 215 RLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 66/125 (52%), Gaps = 19/125 (15%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGR---I 192
I G YLH R R+IHRDLK+ N+ L++D+ KI DFG+A +++ + R +
Sbjct: 124 IVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLA-----TKVEYDGERKKVL 175
Query: 193 VGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGK---KTTGFYRTYSFTLLGYISEN 249
GT Y++PE + S + DV+S G ++ ++ GK +T+ TY I +N
Sbjct: 176 CGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYL-----RIKKN 230
Query: 250 IYEFP 254
Y P
Sbjct: 231 EYSIP 235
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 101/218 (46%), Gaps = 34/218 (15%)
Query: 55 KLGEGGFGPVYKGVLKN-GDEIAVKRLSGRSGQGLREL-------------KNKLRLLGC 100
K+GEG G V +++ G +AVK++ R Q REL +N + +
Sbjct: 81 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ-RRELLFNEVVIMRDYQHENVVEMYNS 139
Query: 101 CIDKDEKILIYEYMPNKSLDFFLFDWVTRVRIIE--------GIAQGLLYLHQYSRVRII 152
+ DE ++ E++ +L D VT R+ E + Q L LH +I
Sbjct: 140 YLVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VI 192
Query: 153 HRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIK 212
HRD+K +ILL D K+SDFG + ++ +VGT +M+PE + + +
Sbjct: 193 HRDIKSDSILLTHDGRVKLSDFGFC--AQVSKEVPRRKXLVGTPYWMAPELISRLPYGPE 250
Query: 213 SDVFSFGVLLLKIVSGKKTTGFYRTYSFTLLGYISENI 250
D++S G++++++V G+ ++ + I +N+
Sbjct: 251 VDIWSLGIMVIEMVDGEPP--YFNEPPLKAMKMIRDNL 286
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 53/94 (56%), Gaps = 6/94 (6%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGT 195
I GL LH R RI++RDLK NILLD + +ISD G+A E Q GR VGT
Sbjct: 295 ICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLA--VHVPEGQTIKGR-VGT 348
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGK 229
YM+PE ++ D ++ G LL ++++G+
Sbjct: 349 VGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ 382
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 104/217 (47%), Gaps = 41/217 (18%)
Query: 42 SVSTATNKFSDANKLGEGGFGPVYKGV-LKNGDEIAVKRLSGRSGQGLRELKN---KLRL 97
++ ++ + + +G G +G V K G +AVK+LS R Q + K +LRL
Sbjct: 22 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRELRL 80
Query: 98 LGCCIDKDEKILIYEYMPNKSL----DFFLFDWVTRVR--------------------II 133
L ++ L+ + P +SL D +L VT + +I
Sbjct: 81 LKHMKHENVIGLLDVFTPARSLEEFNDVYL---VTHLMGADLNNIVKCQKLTDDHVQFLI 137
Query: 134 EGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIV 193
I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR +E+ TG V
Sbjct: 138 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHT-DDEM---TG-YV 189
Query: 194 GTYRYMSPEYAIQGI-FSIKSDVFSFGVLLLKIVSGK 229
T Y +PE + + ++ D++S G ++ ++++G+
Sbjct: 190 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 53/94 (56%), Gaps = 6/94 (6%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGT 195
I GL LH R RI++RDLK NILLD + +ISD G+A E Q GR VGT
Sbjct: 295 ICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLA--VHVPEGQTIKGR-VGT 348
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGK 229
YM+PE ++ D ++ G LL ++++G+
Sbjct: 349 VGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ 382
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 99/217 (45%), Gaps = 41/217 (18%)
Query: 42 SVSTATNKFSDANKLGEGGFGPVYKGV-LKNGDEIAVKRLSGRSGQGLRELKN---KLRL 97
++ ++ + + +G G +G V K G +AVK+LS R Q + K +LRL
Sbjct: 12 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRELRL 70
Query: 98 LGCCIDKDEKILIYEYMPNKSL----DFFLFDWVTRVR--------------------II 133
L ++ L+ + P +SL D +L VT + +I
Sbjct: 71 LKHMKHENVIGLLDVFTPARSLEEFNDVYL---VTHLMGADLNNIVKCQKLTDDHVQFLI 127
Query: 134 EGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIV 193
I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR V
Sbjct: 128 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMAGFV 179
Query: 194 GTYRYMSPEYAIQGI-FSIKSDVFSFGVLLLKIVSGK 229
T Y +PE + + ++ D++S G ++ ++++G+
Sbjct: 180 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 70/125 (56%), Gaps = 12/125 (9%)
Query: 134 EGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNE-LQANTGRI 192
+ + +G+ YLH +IIHRD+K SN+L+ +D + KI+DFG++ +G++ L +NT
Sbjct: 144 QDLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNT--- 197
Query: 193 VGTYRYMSPE--YAIQGIFSIKS-DVFSFGVLLLKIVSGKKTTGFYRTYSFTLLGYISEN 249
VGT +M+PE + IFS K+ DV++ GV L V G+ F L I
Sbjct: 198 VGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQ--CPFMDERIMCLHSKIKSQ 255
Query: 250 IYEFP 254
EFP
Sbjct: 256 ALEFP 260
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 106/217 (48%), Gaps = 41/217 (18%)
Query: 42 SVSTATNKFSDANKLGEGGFGPVYKGV-LKNGDEIAVKRLSGRSGQGLRELKN---KLRL 97
++ ++ + +G G +G V +K+G +IAVK+LS R Q + K +LRL
Sbjct: 45 TIWEVPERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLS-RPFQSIIHAKRTYRELRL 103
Query: 98 LGCCIDKDEKILIYEYMPNKSL----DFFLFDWVTRVR--------------------II 133
L ++ L+ + P SL D +L VT + +I
Sbjct: 104 LKHMKHENVIGLLDVFTPATSLEEFNDVYL---VTHLMGADLNNIVKCQKLTDDHVQFLI 160
Query: 134 EGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIV 193
I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR +E+ TG V
Sbjct: 161 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHT-DDEM---TG-YV 212
Query: 194 GTYRYMSPEYAIQGI-FSIKSDVFSFGVLLLKIVSGK 229
T Y +PE + + +++ D++S G ++ ++++G+
Sbjct: 213 ATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 69/124 (55%), Gaps = 13/124 (10%)
Query: 112 EYMPNKSLDFFLFDWVTRV------RIIEGIAQGLLYLHQYSRVRIIHRDLKVSNILLDK 165
E+M SLD L + R+ ++ + +GL YL + + +I+HRD+K SNIL++
Sbjct: 94 EHMDGGSLDQVLKE-AKRIPEEILGKVSIAVLRGLAYLRE--KHQIMHRDVKPSNILVNS 150
Query: 166 DMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKI 225
K+ DFG++ G + + VGT YM+PE +S++SD++S G+ L+++
Sbjct: 151 RGEIKLCDFGVS----GQLIDSMANSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVEL 206
Query: 226 VSGK 229
G+
Sbjct: 207 AVGR 210
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 99/217 (45%), Gaps = 41/217 (18%)
Query: 42 SVSTATNKFSDANKLGEGGFGPVYKGV-LKNGDEIAVKRLSGRSGQGLRELKN---KLRL 97
++ ++ + + +G G +G V K G +AVK+LS R Q + K +LRL
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRELRL 74
Query: 98 LGCCIDKDEKILIYEYMPNKSL----DFFLFDWVTRVR--------------------II 133
L ++ L+ + P +SL D +L VT + +I
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYL---VTHLMGADLNNIVKCQKLTDDHVQFLI 131
Query: 134 EGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIV 193
I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR V
Sbjct: 132 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMAGFV 183
Query: 194 GTYRYMSPEYAIQGI-FSIKSDVFSFGVLLLKIVSGK 229
T Y +PE + + ++ D++S G ++ ++++G+
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGT 195
+AQG+ +L + IHRD+ N+LL KI DFG+AR + G
Sbjct: 167 VAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLP 223
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVS 227
++M+PE +++++SDV+S+G+LL +I S
Sbjct: 224 VKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 104/217 (47%), Gaps = 41/217 (18%)
Query: 42 SVSTATNKFSDANKLGEGGFGPVYKGV-LKNGDEIAVKRLSGRSGQGLRELKN---KLRL 97
++ ++ + + +G G +G V K G +AVK+LS R Q + K +LRL
Sbjct: 12 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRELRL 70
Query: 98 LGCCIDKDEKILIYEYMPNKSL----DFFLFDWVTRVR--------------------II 133
L ++ L+ + P +SL D +L VT + +I
Sbjct: 71 LKHMKHENVIGLLDVFTPARSLEEFNDVYL---VTHLMGADLNNIVKCAKLTDDHVQFLI 127
Query: 134 EGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIV 193
I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR +E+ TG V
Sbjct: 128 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHT-DDEM---TG-YV 179
Query: 194 GTYRYMSPEYAIQGI-FSIKSDVFSFGVLLLKIVSGK 229
T Y +PE + + ++ D++S G ++ ++++G+
Sbjct: 180 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 104/217 (47%), Gaps = 41/217 (18%)
Query: 42 SVSTATNKFSDANKLGEGGFGPVYKGV-LKNGDEIAVKRLSGRSGQGLRELKN---KLRL 97
++ ++ + + +G G +G V K G +AVK+LS R Q + K +LRL
Sbjct: 12 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRELRL 70
Query: 98 LGCCIDKDEKILIYEYMPNKSL----DFFLFDWVTRVR--------------------II 133
L ++ L+ + P +SL D +L VT + +I
Sbjct: 71 LKHMKHENVIGLLDVFTPARSLEEFNDVYL---VTHLMGADLNNIVKCQKLTDDHVQFLI 127
Query: 134 EGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIV 193
I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR +E+ TG V
Sbjct: 128 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHT-DDEM---TG-YV 179
Query: 194 GTYRYMSPEYAIQGI-FSIKSDVFSFGVLLLKIVSGK 229
T Y +PE + + ++ D++S G ++ ++++G+
Sbjct: 180 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 99/217 (45%), Gaps = 41/217 (18%)
Query: 42 SVSTATNKFSDANKLGEGGFGPVYKGV-LKNGDEIAVKRLSGRSGQGLRELKN---KLRL 97
++ ++ + + +G G +G V K G +AVK+LS R Q + K +LRL
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRELRL 74
Query: 98 LGCCIDKDEKILIYEYMPNKSL----DFFLFDWVTRVR--------------------II 133
L ++ L+ + P +SL D +L VT + +I
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYL---VTHLMGADLNNIVKCQKLTDDHVQFLI 131
Query: 134 EGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIV 193
I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR V
Sbjct: 132 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMAGFV 183
Query: 194 GTYRYMSPEYAIQGI-FSIKSDVFSFGVLLLKIVSGK 229
T Y +PE + + ++ D++S G ++ ++++G+
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGT 195
+AQG+ +L + IHRD+ N+LL KI DFG+AR + G
Sbjct: 175 VAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLP 231
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVS 227
++M+PE +++++SDV+S+G+LL +I S
Sbjct: 232 VKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 104/217 (47%), Gaps = 41/217 (18%)
Query: 42 SVSTATNKFSDANKLGEGGFGPVYKGV-LKNGDEIAVKRLSGRSGQGLRELKN---KLRL 97
++ ++ + + +G G +G V K G +AVK+LS R Q + K +LRL
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRELRL 74
Query: 98 LGCCIDKDEKILIYEYMPNKSL----DFFLFDWVTRVR--------------------II 133
L ++ L+ + P +SL D +L VT + +I
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYL---VTHLMGADLNNIVKCQKLTDDHVQFLI 131
Query: 134 EGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIV 193
I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR +E+ TG V
Sbjct: 132 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHT-DDEM---TG-YV 183
Query: 194 GTYRYMSPEYAIQGI-FSIKSDVFSFGVLLLKIVSGK 229
T Y +PE + + ++ D++S G ++ ++++G+
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGT 195
+AQG+ +L + IHRD+ N+LL KI DFG+AR + G
Sbjct: 169 VAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLP 225
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVS 227
++M+PE +++++SDV+S+G+LL +I S
Sbjct: 226 VKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 99/210 (47%), Gaps = 34/210 (16%)
Query: 45 TATNKFSDANKLGEGGFGPVYK-------------GVLKNGDEIAVKRLSGRSGQGLREL 91
+ K+ + +GEG +G V K L++ D+ VK+++ R + L++L
Sbjct: 22 QSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQL 81
Query: 92 K--NKLRLLGCCIDKDEKILIYEYMPNKSLD-FFLF----DWVTRVRIIEGIAQGLLYLH 144
+ N + LL C K L++E++ + LD LF D+ + + I G+ + H
Sbjct: 82 RHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCH 141
Query: 145 QYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRI----VGTYRYMS 200
++ IIHRD+K NIL+ + K+ DFG AR A G + V T Y +
Sbjct: 142 SHN---IIHRDIKPENILVSQSGVVKLCDFGFARTL------AAPGEVYDDEVATRWYRA 192
Query: 201 PEYAIQGI-FSIKSDVFSFGVLLLKIVSGK 229
PE + + + DV++ G L+ ++ G+
Sbjct: 193 PELLVGDVKYGKAVDVWAIGCLVTEMFMGE 222
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 93/209 (44%), Gaps = 38/209 (18%)
Query: 50 FSDANKLGEGGFGPVYKGVLK-NGDEIAVKRLSGRSGQGLRELK--------NKLRLLGC 100
F + +G GGFG V+K + +G +KR+ + + RE+K N + GC
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVKALAKLDHVNIVHYNGC 72
Query: 101 C--IDKDEK--------------ILIYEYMPNKSLDFFL-------FDWVTRVRIIEGIA 137
D D + + E+ +L+ ++ D V + + E I
Sbjct: 73 WDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQIT 132
Query: 138 QGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYR 197
+G+ Y+H ++I+RDLK SNI L KI DFG+ + + R GT R
Sbjct: 133 KGVDYIHSK---KLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKND---GKRXRSKGTLR 186
Query: 198 YMSPEYAIQGIFSIKSDVFSFGVLLLKIV 226
YMSPE + + D+++ G++L +++
Sbjct: 187 YMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 98/202 (48%), Gaps = 33/202 (16%)
Query: 54 NKLGEGGFGPV----YKGVLKN-GDEIAVKRLSGRSGQGLRELKNKLRLLGCCID----- 103
++LG+G FG V Y + N G +AVK+L R+ + ++++L
Sbjct: 16 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 75
Query: 104 ---------KDEKILIYEYMPNKSLDFFLFDWVTRV---RII---EGIAQGLLYLHQYSR 148
+ L+ EY+P+ L FL R+ R++ I +G+ YL
Sbjct: 76 YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYL---GS 132
Query: 149 VRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNE---LQANTGRIVGTYRYMSPEYAI 205
R +HRDL NIL++ + + KI+DFG+A++ ++ + G+ + +PE
Sbjct: 133 RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQ--SPIFWYAPESLS 190
Query: 206 QGIFSIKSDVFSFGVLLLKIVS 227
IFS +SDV+SFGV+L ++ +
Sbjct: 191 DNIFSRQSDVWSFGVVLYELFT 212
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 101/238 (42%), Gaps = 45/238 (18%)
Query: 56 LGEGGFGPVYKGVLKNGDEIAVKRLSGRSGQGLRELKNKLRLLGCCIDKDEKILIYEYMP 115
+G+G FG V++G + G+E+AVK S R R + + + + E IL +
Sbjct: 50 IGKGRFGEVWRGKWR-GEEVAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAAD 105
Query: 116 NKSLDFF--------------LFDWVTRVRI-IEGI-------AQGLLYLHQ-----YSR 148
NK + LFD++ R + +EG+ A GL +LH +
Sbjct: 106 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGK 165
Query: 149 VRIIHRDLKVSNILLDKDMNPKISDFGIA--RICRGNELQANTGRIVGTYRYMSPEYAIQ 206
I HRDLK NIL+ K+ I+D G+A + + VGT RYM+PE
Sbjct: 166 PAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDD 225
Query: 207 GI-------FSIKSDVFSFGVLLLKIVSGKKTTGFYRTYSFTLLGYISENIYEFPSVD 257
I F ++D+++ G++ +I G + Y + + PSV+
Sbjct: 226 SINMKHFESFK-RADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD----PSVE 278
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 104/217 (47%), Gaps = 41/217 (18%)
Query: 42 SVSTATNKFSDANKLGEGGFGPVYKGV-LKNGDEIAVKRLSGRSGQGLRELKN---KLRL 97
++ ++ + + +G G +G V K G +AVK+LS R Q + K +LRL
Sbjct: 35 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRELRL 93
Query: 98 LGCCIDKDEKILIYEYMPNKSL----DFFLFDWVTRVR--------------------II 133
L ++ L+ + P +SL D +L VT + +I
Sbjct: 94 LKHMKHENVIGLLDVFTPARSLEEFNDVYL---VTHLMGADLNNIVKCQKLTDDHVQFLI 150
Query: 134 EGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIV 193
I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR +E+ TG V
Sbjct: 151 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHT-DDEM---TG-YV 202
Query: 194 GTYRYMSPEYAIQGI-FSIKSDVFSFGVLLLKIVSGK 229
T Y +PE + + ++ D++S G ++ ++++G+
Sbjct: 203 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 104/217 (47%), Gaps = 41/217 (18%)
Query: 42 SVSTATNKFSDANKLGEGGFGPVYKGV-LKNGDEIAVKRLSGRSGQGLRELKN---KLRL 97
++ ++ + + +G G +G V K G +AVK+LS R Q + K +LRL
Sbjct: 36 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRELRL 94
Query: 98 LGCCIDKDEKILIYEYMPNKSL----DFFLFDWVTRVR--------------------II 133
L ++ L+ + P +SL D +L VT + +I
Sbjct: 95 LKHMKHENVIGLLDVFTPARSLEEFNDVYL---VTHLMGADLNNIVKCQKLTDDHVQFLI 151
Query: 134 EGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIV 193
I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR +E+ TG V
Sbjct: 152 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHT-DDEM---TG-YV 203
Query: 194 GTYRYMSPEYAIQGI-FSIKSDVFSFGVLLLKIVSGK 229
T Y +PE + + ++ D++S G ++ ++++G+
Sbjct: 204 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 101/238 (42%), Gaps = 45/238 (18%)
Query: 56 LGEGGFGPVYKGVLKNGDEIAVKRLSGRSGQGLRELKNKLRLLGCCIDKDEKILIYEYMP 115
+G+G FG V++G + G+E+AVK S R R + + + + E IL +
Sbjct: 12 IGKGRFGEVWRGKWR-GEEVAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAAD 67
Query: 116 NKSLDFF--------------LFDWVTRVRI-IEGI-------AQGLLYLHQ-----YSR 148
NK + LFD++ R + +EG+ A GL +LH +
Sbjct: 68 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGK 127
Query: 149 VRIIHRDLKVSNILLDKDMNPKISDFGIA--RICRGNELQANTGRIVGTYRYMSPEYAIQ 206
I HRDLK NIL+ K+ I+D G+A + + VGT RYM+PE
Sbjct: 128 PAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDD 187
Query: 207 GI-------FSIKSDVFSFGVLLLKIVSGKKTTGFYRTYSFTLLGYISENIYEFPSVD 257
I F ++D+++ G++ +I G + Y + + PSV+
Sbjct: 188 SINMKHFESFK-RADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD----PSVE 240
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 104/217 (47%), Gaps = 41/217 (18%)
Query: 42 SVSTATNKFSDANKLGEGGFGPVYKGV-LKNGDEIAVKRLSGRSGQGLRELKN---KLRL 97
++ ++ + + +G G +G V K G +AVK+LS R Q + K +LRL
Sbjct: 23 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRL 81
Query: 98 LGCCIDKDEKILIYEYMPNKSL----DFFLFDWVTRVR--------------------II 133
L ++ L+ + P +SL D +L VT + +I
Sbjct: 82 LKHMKHENVIGLLDVFTPARSLEEFNDVYL---VTHLMGADLNNIVKCQKLTDDHVQFLI 138
Query: 134 EGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIV 193
I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR +E+ TG V
Sbjct: 139 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHT-ADEM---TG-YV 190
Query: 194 GTYRYMSPEYAIQGI-FSIKSDVFSFGVLLLKIVSGK 229
T Y +PE + + ++ D++S G ++ ++++G+
Sbjct: 191 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 104/217 (47%), Gaps = 41/217 (18%)
Query: 42 SVSTATNKFSDANKLGEGGFGPVYKGV-LKNGDEIAVKRLSGRSGQGLRELKN---KLRL 97
++ ++ + + +G G +G V K G +AVK+LS R Q + K +LRL
Sbjct: 23 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRL 81
Query: 98 LGCCIDKDEKILIYEYMPNKSL----DFFLFDWVTRVR--------------------II 133
L ++ L+ + P +SL D +L VT + +I
Sbjct: 82 LKHMKHENVIGLLDVFTPARSLEEFNDVYL---VTHLMGADLNNIVKCQKLTDDHVQFLI 138
Query: 134 EGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIV 193
I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR +E+ TG V
Sbjct: 139 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHT-ADEM---TG-YV 190
Query: 194 GTYRYMSPEYAIQGI-FSIKSDVFSFGVLLLKIVSGK 229
T Y +PE + + ++ D++S G ++ ++++G+
Sbjct: 191 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 87/203 (42%), Gaps = 34/203 (16%)
Query: 50 FSDANKLGEGGFGPVYKGVLKNGDEI-AVKRL-------SGRSGQGLRELK--------N 93
F LG+G FG VY + I A+K L +G Q RE++ N
Sbjct: 14 FDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 94 KLRLLGCCIDKDEKILIYEYMPNKSLDFFL-----FDWVTRVRIIEGIAQGLLYLHQYSR 148
LRL G D LI EY P ++ L FD I +A L Y H
Sbjct: 74 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHS--- 130
Query: 149 VRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGR---IVGTYRYMSPEYAI 205
R+IHRD+K N+LL + KI+DFG + + A + R + GT Y+ PE
Sbjct: 131 KRVIHRDIKPENLLLGSNGELKIADFGWS-------VHAPSSRRTTLCGTLDYLPPEMIE 183
Query: 206 QGIFSIKSDVFSFGVLLLKIVSG 228
+ K D++S GVL + + G
Sbjct: 184 GRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 104/217 (47%), Gaps = 41/217 (18%)
Query: 42 SVSTATNKFSDANKLGEGGFGPVYKGV-LKNGDEIAVKRLSGRSGQGLRELKN---KLRL 97
++ ++ + + +G G +G V K G +AVK+LS R Q + K +LRL
Sbjct: 23 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRL 81
Query: 98 LGCCIDKDEKILIYEYMPNKSL----DFFLFDWVTRVR--------------------II 133
L ++ L+ + P +SL D +L VT + +I
Sbjct: 82 LKHMKHENVIGLLDVFTPARSLEEFNDVYL---VTHLMGADLNNIVKCQKLTDDHVQFLI 138
Query: 134 EGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIV 193
I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR +E+ TG V
Sbjct: 139 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHT-ADEM---TG-YV 190
Query: 194 GTYRYMSPEYAIQGI-FSIKSDVFSFGVLLLKIVSGK 229
T Y +PE + + ++ D++S G ++ ++++G+
Sbjct: 191 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 101/220 (45%), Gaps = 40/220 (18%)
Query: 44 STATNKFSDANKLGEGGFGPVYKGV-LKNGDEIAVKRL---------------SGRSGQG 87
S AT+++ ++G G +G VYK +G +A+K + + R
Sbjct: 5 SMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVAL 64
Query: 88 LRELK-----NKLRLLGCC----IDKDEKI-LIYEYMPNKSLDFFL-------FDWVTRV 130
LR L+ N +RL+ C D++ K+ L++E++ ++ L +L T
Sbjct: 65 LRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIK 123
Query: 131 RIIEGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTG 190
++ +GL +LH I+HRDLK NIL+ K++DFG+ARI Q
Sbjct: 124 DLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI---YSYQMALT 177
Query: 191 RIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGKK 230
+V T Y +PE +Q ++ D++S G + ++ K
Sbjct: 178 PVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKP 217
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 98/202 (48%), Gaps = 33/202 (16%)
Query: 54 NKLGEGGFGPV----YKGVLKN-GDEIAVKRLSGRSGQGLRELKNKLRLLGCCID----- 103
++LG+G FG V Y + N G +AVK+L R+ + ++++L
Sbjct: 29 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 88
Query: 104 ---------KDEKILIYEYMPNKSLDFFLFDWVTRV---RII---EGIAQGLLYLHQYSR 148
+ L+ EY+P+ L FL R+ R++ I +G+ YL
Sbjct: 89 YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYL---GS 145
Query: 149 VRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNE---LQANTGRIVGTYRYMSPEYAI 205
R +HRDL NIL++ + + KI+DFG+A++ ++ + G+ + +PE
Sbjct: 146 RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQ--SPIFWYAPESLS 203
Query: 206 QGIFSIKSDVFSFGVLLLKIVS 227
IFS +SDV+SFGV+L ++ +
Sbjct: 204 DNIFSRQSDVWSFGVVLYELFT 225
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 95/221 (42%), Gaps = 41/221 (18%)
Query: 56 LGEGGFGPVYKGVLKNGDEIAVKRLSGRSGQGLRELKNKLRLLGCCIDKDEKILIYEYMP 115
+G+G FG V++G + G+E+AVK S R R + + + + E IL +
Sbjct: 37 IGKGRFGEVWRGKWR-GEEVAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAAD 92
Query: 116 NKSLDFF--------------LFDWVTRVRI-IEGI-------AQGLLYLHQ-----YSR 148
NK + LFD++ R + +EG+ A GL +LH +
Sbjct: 93 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGK 152
Query: 149 VRIIHRDLKVSNILLDKDMNPKISDFGIA--RICRGNELQANTGRIVGTYRYMSPEYAIQ 206
I HRDLK NIL+ K+ I+D G+A + + VGT RYM+PE
Sbjct: 153 PAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDD 212
Query: 207 GI-------FSIKSDVFSFGVLLLKIVSGKKTTGFYRTYSF 240
I F ++D+++ G++ +I G + Y
Sbjct: 213 SINMKHFESFK-RADIYAMGLVFWEIARRCSIGGIHEDYQL 252
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 98/202 (48%), Gaps = 33/202 (16%)
Query: 54 NKLGEGGFGPV----YKGVLKN-GDEIAVKRLSGRSGQGLRELKNKLRLLGCCID----- 103
++LG+G FG V Y + N G +AVK+L R+ + ++++L
Sbjct: 17 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 76
Query: 104 ---------KDEKILIYEYMPNKSLDFFLFDWVTRV---RII---EGIAQGLLYLHQYSR 148
+ L+ EY+P+ L FL R+ R++ I +G+ YL
Sbjct: 77 YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYL---GS 133
Query: 149 VRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNE---LQANTGRIVGTYRYMSPEYAI 205
R +HRDL NIL++ + + KI+DFG+A++ ++ + G+ + +PE
Sbjct: 134 RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQ--SPIFWYAPESLS 191
Query: 206 QGIFSIKSDVFSFGVLLLKIVS 227
IFS +SDV+SFGV+L ++ +
Sbjct: 192 DNIFSRQSDVWSFGVVLYELFT 213
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 104/217 (47%), Gaps = 41/217 (18%)
Query: 42 SVSTATNKFSDANKLGEGGFGPVYKGV-LKNGDEIAVKRLSGRSGQGLRELKN---KLRL 97
++ ++ + + +G G +G V K G +AVK+LS R Q + K +LRL
Sbjct: 21 TIWEVPERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRL 79
Query: 98 LGCCIDKDEKILIYEYMPNKSL----DFFLFDWVTRVR--------------------II 133
L ++ L+ + P +SL D +L VT + +I
Sbjct: 80 LKHMKHENVIGLLDVFTPARSLEEFNDVYL---VTHLMGADLNNIVKCQKLTDDHVQFLI 136
Query: 134 EGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIV 193
I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR +E+ TG V
Sbjct: 137 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLARHT-DDEM---TG-YV 188
Query: 194 GTYRYMSPEYAIQGI-FSIKSDVFSFGVLLLKIVSGK 229
T Y +PE + + ++ D++S G ++ ++++G+
Sbjct: 189 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 101/238 (42%), Gaps = 45/238 (18%)
Query: 56 LGEGGFGPVYKGVLKNGDEIAVKRLSGRSGQGLRELKNKLRLLGCCIDKDEKILIYEYMP 115
+G+G FG V++G + G+E+AVK S R R + + + + E IL +
Sbjct: 11 IGKGRFGEVWRGKWR-GEEVAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAAD 66
Query: 116 NKSLDFF--------------LFDWVTRVRI-IEGI-------AQGLLYLHQ-----YSR 148
NK + LFD++ R + +EG+ A GL +LH +
Sbjct: 67 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGK 126
Query: 149 VRIIHRDLKVSNILLDKDMNPKISDFGIA--RICRGNELQANTGRIVGTYRYMSPEYAIQ 206
I HRDLK NIL+ K+ I+D G+A + + VGT RYM+PE
Sbjct: 127 PAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDD 186
Query: 207 GI-------FSIKSDVFSFGVLLLKIVSGKKTTGFYRTYSFTLLGYISENIYEFPSVD 257
I F ++D+++ G++ +I G + Y + + PSV+
Sbjct: 187 SINMKHFESFK-RADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD----PSVE 239
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 78/149 (52%), Gaps = 25/149 (16%)
Query: 123 LFDWVTRV---------RIIEGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISD 173
LFD++T +I+ + + + LH ++ I+HRDLK NILLD DMN K++D
Sbjct: 111 LFDYLTEKVTLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTD 167
Query: 174 FGIA-RICRGNELQANTGRIVGTYRYMSPEYAIQGI------FSIKSDVFSFGVLLLKIV 226
FG + ++ G +L++ + GT Y++PE + + + D++S GV++ ++
Sbjct: 168 FGFSCQLDPGEKLRS----VCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLL 223
Query: 227 SGKKTTGFYRTYSFTLLGYISENIYEFPS 255
+G + F+ +L I Y+F S
Sbjct: 224 AG--SPPFWHRKQMLMLRMIMSGNYQFGS 250
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 51/100 (51%), Gaps = 19/100 (19%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIA-RICRGNELQANTGRIVG 194
I + Y HQ I+HRDLK N+LLD D N KI+DFG + GN+L A G
Sbjct: 122 IVSAVQYCHQKF---IVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAFCG---- 174
Query: 195 TYRYMSPEYAIQGIFSIKS------DVFSFGVLLLKIVSG 228
+P YA +F K DV+S GV+L +VSG
Sbjct: 175 -----APPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 95/221 (42%), Gaps = 41/221 (18%)
Query: 56 LGEGGFGPVYKGVLKNGDEIAVKRLSGRSGQGLRELKNKLRLLGCCIDKDEKILIYEYMP 115
+G+G FG V++G + G+E+AVK S R R + + + + E IL +
Sbjct: 17 IGKGRFGEVWRGKWR-GEEVAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAAD 72
Query: 116 NKSLDFF--------------LFDWVTRVRI-IEGI-------AQGLLYLHQ-----YSR 148
NK + LFD++ R + +EG+ A GL +LH +
Sbjct: 73 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGK 132
Query: 149 VRIIHRDLKVSNILLDKDMNPKISDFGIA--RICRGNELQANTGRIVGTYRYMSPEYAIQ 206
I HRDLK NIL+ K+ I+D G+A + + VGT RYM+PE
Sbjct: 133 PAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDD 192
Query: 207 GI-------FSIKSDVFSFGVLLLKIVSGKKTTGFYRTYSF 240
I F ++D+++ G++ +I G + Y
Sbjct: 193 SINMKHFESFK-RADIYAMGLVFWEIARRCSIGGIHEDYQL 232
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 102/217 (47%), Gaps = 41/217 (18%)
Query: 42 SVSTATNKFSDANKLGEGGFGPVYKGV-LKNGDEIAVKRLSGRSGQGLRELKN---KLRL 97
++ ++ + + +G G +G V K G +AVK+LS R Q + K +LRL
Sbjct: 36 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRELRL 94
Query: 98 LGCCIDKDEKILIYEYMPNKSL----DFFLFDWVTRVR--------------------II 133
L ++ L+ + P +SL D +L VT + +I
Sbjct: 95 LKHMKHENVIGLLDVFTPARSLEEFNDVYL---VTHLMGADLNNIVKCQKLTDDHVQFLI 151
Query: 134 EGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIV 193
I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR +E+ V
Sbjct: 152 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHT-DDEMXGX----V 203
Query: 194 GTYRYMSPEYAIQGI-FSIKSDVFSFGVLLLKIVSGK 229
T Y +PE + + ++ D++S G ++ ++++G+
Sbjct: 204 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 87/203 (42%), Gaps = 34/203 (16%)
Query: 50 FSDANKLGEGGFGPVYKGVLKNGDEI-AVKRL-------SGRSGQGLRELK--------N 93
F LG+G FG VY + I A+K L +G Q RE++ N
Sbjct: 14 FDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 94 KLRLLGCCIDKDEKILIYEYMPNKSLDFFL-----FDWVTRVRIIEGIAQGLLYLHQYSR 148
LRL G D LI EY P ++ L FD I +A L Y H
Sbjct: 74 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHS--- 130
Query: 149 VRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGR---IVGTYRYMSPEYAI 205
R+IHRD+K N+LL + KI+DFG + + A + R + GT Y+ PE
Sbjct: 131 KRVIHRDIKPENLLLGSNGELKIADFGWS-------VHAPSSRRDTLCGTLDYLPPEMIE 183
Query: 206 QGIFSIKSDVFSFGVLLLKIVSG 228
+ K D++S GVL + + G
Sbjct: 184 GRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 103/217 (47%), Gaps = 41/217 (18%)
Query: 42 SVSTATNKFSDANKLGEGGFGPVYKGV-LKNGDEIAVKRLSGRSGQGLRELKN---KLRL 97
++ ++ + +G G +G V K G +AVK+LS R Q + K +LRL
Sbjct: 26 TIWEVPERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRELRL 84
Query: 98 LGCCIDKDEKILIYEYMPNKSL----DFFLFDWVTRVR--------------------II 133
L ++ L+ + P +SL D +L VT + +I
Sbjct: 85 LKHMKHENVIGLLDVFTPARSLEEFNDVYL---VTHLMGADLNNIVKCQKLTDDHVQFLI 141
Query: 134 EGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIV 193
I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR +E+ TG V
Sbjct: 142 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHT-DDEM---TG-YV 193
Query: 194 GTYRYMSPEYAIQGI-FSIKSDVFSFGVLLLKIVSGK 229
T Y +PE + + ++ D++S G ++ ++++G+
Sbjct: 194 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 58/95 (61%), Gaps = 7/95 (7%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGR-IVG 194
I+ GL +LH+ II+RDLK+ N++LD + + KI+DFG +C+ + + T R G
Sbjct: 129 ISIGLFFLHKRG---IIYRDLKLDNVMLDSEGHIKIADFG---MCKEHMMDGVTTREFCG 182
Query: 195 TYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGK 229
T Y++PE + D +++GVLL ++++G+
Sbjct: 183 TPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQ 217
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 104/217 (47%), Gaps = 41/217 (18%)
Query: 42 SVSTATNKFSDANKLGEGGFGPVYKGV-LKNGDEIAVKRLSGRSGQGLRELKN---KLRL 97
++ ++ + + +G G +G V K G +AVK+LS R Q + K +LRL
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRL 74
Query: 98 LGCCIDKDEKILIYEYMPNKSL----DFFLFDWVTRVR--------------------II 133
L ++ L+ + P +SL D +L VT + +I
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYL---VTHLMGADLNNIVKCQKLTDDHVQFLI 131
Query: 134 EGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIV 193
I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR +E+ TG V
Sbjct: 132 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHT-DDEM---TG-YV 183
Query: 194 GTYRYMSPEYAIQGI-FSIKSDVFSFGVLLLKIVSGK 229
T Y +PE + + ++ D++S G ++ ++++G+
Sbjct: 184 ATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 101/238 (42%), Gaps = 45/238 (18%)
Query: 56 LGEGGFGPVYKGVLKNGDEIAVKRLSGRSGQGLRELKNKLRLLGCCIDKDEKILIYEYMP 115
+G+G FG V++G + G+E+AVK S R R + + + + E IL +
Sbjct: 14 IGKGRFGEVWRGKWR-GEEVAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAAD 69
Query: 116 NKSLDFF--------------LFDWVTRVRI-IEGI-------AQGLLYLHQ-----YSR 148
NK + LFD++ R + +EG+ A GL +LH +
Sbjct: 70 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGK 129
Query: 149 VRIIHRDLKVSNILLDKDMNPKISDFGIA--RICRGNELQANTGRIVGTYRYMSPEYAIQ 206
I HRDLK NIL+ K+ I+D G+A + + VGT RYM+PE
Sbjct: 130 PAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDD 189
Query: 207 GI-------FSIKSDVFSFGVLLLKIVSGKKTTGFYRTYSFTLLGYISENIYEFPSVD 257
I F ++D+++ G++ +I G + Y + + PSV+
Sbjct: 190 SINMKHFESFK-RADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD----PSVE 242
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 90/194 (46%), Gaps = 23/194 (11%)
Query: 55 KLGEGGFGPVYKGVLKNGDEIAV-KRLSGRSGQGLRELKNKLRLLGCC--------ID-- 103
+LG+G FG VYK K +A K + +S + L + ++ +L C +D
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 104 --KDEKILIYEYMPNKSLDFFLFDW---VTRVRIIEGIAQGLLYLHQYSRVRIIHRDLKV 158
++ ++ E+ ++D + + +T +I Q L L+ +IIHRDLK
Sbjct: 104 YYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKA 163
Query: 159 SNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAI-----QGIFSIKS 213
NIL D + K++DFG++ + +GT +M+PE + + K+
Sbjct: 164 GNILFTLDGDIKLADFGVS--AKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKA 221
Query: 214 DVFSFGVLLLKIVS 227
DV+S G+ L+++
Sbjct: 222 DVWSLGITLIEMAE 235
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 102/247 (41%), Gaps = 65/247 (26%)
Query: 31 EVDQLPLFSFSSVSTATNKFSDANKLGEGGFGPVY--------KGVLKNGDEIAVKRLSG 82
E+ + P + F +K + LGEG FG V K K +AVK L
Sbjct: 23 ELPEDPKWEFPR-----DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD 77
Query: 83 RSGQ-GLREL-------------KNKLRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVT 128
+ + L +L KN + LLG C +I Y +L +L
Sbjct: 78 DATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYL----- 132
Query: 129 RVRIIEG--------------------------IAQGLLYLHQYSRVRIIHRDLKVSNIL 162
R R G +A+G+ YL + + IHRDL N+L
Sbjct: 133 RARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVL 189
Query: 163 LDKDMNPKISDFGIARICRGNELQANT--GRIVGTYRYMSPEYAIQGIFSIKSDVFSFGV 220
+ ++ KI+DFG+AR + T GR+ ++M+PE +++ +SDV+SFGV
Sbjct: 190 VTENNVMKIADFGLARDINNIDYYKKTTNGRL--PVKWMAPEALFDRVYTHQSDVWSFGV 247
Query: 221 LLLKIVS 227
L+ +I +
Sbjct: 248 LMWEIFT 254
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 104/217 (47%), Gaps = 41/217 (18%)
Query: 42 SVSTATNKFSDANKLGEGGFGPVYKGV-LKNGDEIAVKRLSGRSGQGLRELKN---KLRL 97
++ ++ + + +G G +G V K G +AVK+LS R Q + K +LRL
Sbjct: 21 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRL 79
Query: 98 LGCCIDKDEKILIYEYMPNKSL----DFFLFDWVTRVR--------------------II 133
L ++ L+ + P +SL D +L VT + +I
Sbjct: 80 LKHMKHENVIGLLDVFTPARSLEEFNDVYL---VTHLMGADLNNIVKCQKLTDDHVQFLI 136
Query: 134 EGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIV 193
I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR +E+ TG V
Sbjct: 137 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLARHT-DDEM---TG-YV 188
Query: 194 GTYRYMSPEYAIQGI-FSIKSDVFSFGVLLLKIVSGK 229
T Y +PE + + ++ D++S G ++ ++++G+
Sbjct: 189 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 104/214 (48%), Gaps = 35/214 (16%)
Query: 42 SVSTATNKFSDANKLGEGGFGPVYKGV-LKNGDEIAVKRLSGRSGQGLRELKN---KLRL 97
++ ++ + + +G G +G V K G +AVK+LS R Q + K +LRL
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRL 74
Query: 98 LGCCIDKDEKILIYEYMPNKSLDFF-------------LFDWVTRVRI--------IEGI 136
L ++ L+ + P +SL+ F L + V ++ I I
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQI 134
Query: 137 AQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTY 196
+GL Y+H IIHRDLK SN+ +++D KI DFG+AR +E+ TG V T
Sbjct: 135 LRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLARHT-DDEM---TG-YVATR 186
Query: 197 RYMSPEYAIQGI-FSIKSDVFSFGVLLLKIVSGK 229
Y +PE + + ++ D++S G ++ ++++G+
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 113/259 (43%), Gaps = 45/259 (17%)
Query: 33 DQLPLFSFSSVSTATNKFSDANKLGEGGFGPVYKGVLK-NGDEIAVK-------RLSGRS 84
D+LP +++ K+ + +G G V + V + G E AVK RLS
Sbjct: 81 DELP--DWAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQ 138
Query: 85 GQGLREL-KNKLRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTRVR------------ 131
+ +RE + + +L I + + + S F +FD + +
Sbjct: 139 LEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALS 198
Query: 132 ------IIEGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIA-RICRGNE 184
I+ + + + +LH + I+HRDLK NILLD +M ++SDFG + + G +
Sbjct: 199 EKETRSIMRSLLEAVSFLHANN---IVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEK 255
Query: 185 LQANTGRIVGTYRYMSPEY------AIQGIFSIKSDVFSFGVLLLKIVSGKKTTGFYRTY 238
L+ + GT Y++PE + + D+++ GV+L +++G + F+
Sbjct: 256 LR----ELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAG--SPPFWHRR 309
Query: 239 SFTLLGYISENIYEFPSVD 257
+L I E Y+F S +
Sbjct: 310 QILMLRMIMEGQYQFSSPE 328
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 90/194 (46%), Gaps = 23/194 (11%)
Query: 55 KLGEGGFGPVYKGVLKNGDEIAV-KRLSGRSGQGLRELKNKLRLLGCC--------ID-- 103
+LG+G FG VYK K +A K + +S + L + ++ +L C +D
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 104 --KDEKILIYEYMPNKSLDFFLFDW---VTRVRIIEGIAQGLLYLHQYSRVRIIHRDLKV 158
++ ++ E+ ++D + + +T +I Q L L+ +IIHRDLK
Sbjct: 104 YYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKA 163
Query: 159 SNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAI-----QGIFSIKS 213
NIL D + K++DFG++ + +GT +M+PE + + K+
Sbjct: 164 GNILFTLDGDIKLADFGVS--AKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKA 221
Query: 214 DVFSFGVLLLKIVS 227
DV+S G+ L+++
Sbjct: 222 DVWSLGITLIEMAE 235
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 77/149 (51%), Gaps = 25/149 (16%)
Query: 123 LFDWVTRV---------RIIEGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISD 173
LFD++T +I+ + + + LH ++ I+HRDLK NILLD DMN K++D
Sbjct: 98 LFDYLTEKVTLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTD 154
Query: 174 FGIA-RICRGNELQANTGRIVGTYRYMSPEYAIQGI------FSIKSDVFSFGVLLLKIV 226
FG + ++ G +L+ + GT Y++PE + + + D++S GV++ ++
Sbjct: 155 FGFSCQLDPGEKLR----EVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLL 210
Query: 227 SGKKTTGFYRTYSFTLLGYISENIYEFPS 255
+G + F+ +L I Y+F S
Sbjct: 211 AG--SPPFWHRKQMLMLRMIMSGNYQFGS 237
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 90/194 (46%), Gaps = 23/194 (11%)
Query: 55 KLGEGGFGPVYKGVLKNGDEIAV-KRLSGRSGQGLRELKNKLRLLGCC--------ID-- 103
+LG+G FG VYK K +A K + +S + L + ++ +L C +D
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 104 --KDEKILIYEYMPNKSLDFFLFDW---VTRVRIIEGIAQGLLYLHQYSRVRIIHRDLKV 158
++ ++ E+ ++D + + +T +I Q L L+ +IIHRDLK
Sbjct: 104 YYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKA 163
Query: 159 SNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAI-----QGIFSIKS 213
NIL D + K++DFG++ + +GT +M+PE + + K+
Sbjct: 164 GNILFTLDGDIKLADFGVS--AKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKA 221
Query: 214 DVFSFGVLLLKIVS 227
DV+S G+ L+++
Sbjct: 222 DVWSLGITLIEMAE 235
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 114/275 (41%), Gaps = 59/275 (21%)
Query: 42 SVSTATNKFSDANKL-----GEGGFGPVYKGV-LKNGDEIAVKRLSGRSGQG----LREL 91
S + KF D KL GEG + V V L+NG E AVK + ++G RE+
Sbjct: 2 STDSLPGKFEDMYKLTSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREV 61
Query: 92 ---------KNKLRLLGCCIDKDEKILIYEYMPNKSLDFFL-----FDWVTRVRIIEGIA 137
KN L L+ D L++E + S+ + F+ R++ +A
Sbjct: 62 ETLYQCQGNKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVA 121
Query: 138 QGLLYLHQYSRVRIIHRDLKVSNILLD--KDMNP-KISDFGIARICRGNELQANTGRI-- 192
L +LH I HRDLK NIL + + ++P KI DF + G +L + I
Sbjct: 122 AALDFLHTKG---IAHRDLKPENILCESPEKVSPVKICDFDLG---SGMKLNNSCTPITT 175
Query: 193 ------VGTYRYMSPE----YAIQGIFSIK-SDVFSFGVLLLKIVSG--------KKTTG 233
G+ YM+PE + Q F K D++S GV+L ++SG G
Sbjct: 176 PELTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCG 235
Query: 234 F-----YRTYSFTLLGYISENIYEFPSVDTHNVKT 263
+ R L I E YEFP D ++ +
Sbjct: 236 WDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISS 270
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 102/219 (46%), Gaps = 55/219 (25%)
Query: 49 KFSDANKLGEGGFGPV---YKGVLKNGDEIAVKRLSGRSGQG-----LRELKNKLR---- 96
++++ + +GEG +G V Y V N +A+K++S Q LRE+K LR
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHE 81
Query: 97 ---------------------LLGCCIDKD-EKILIYEYMPNKSLDFFLFDWVTRVRIIE 134
++ ++ D K+L +++ N + +FL+
Sbjct: 82 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ--------- 132
Query: 135 GIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTG---R 191
I +GL Y+H ++HRDLK SN+LL+ + KI DFG+AR+ + +TG
Sbjct: 133 -ILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPD--HDHTGFLTE 186
Query: 192 IVGTYRYMSPEYAIQGIFSIKS-DVFSFGVLLLKIVSGK 229
V T Y +PE + KS D++S G +L +++S +
Sbjct: 187 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 102/219 (46%), Gaps = 55/219 (25%)
Query: 49 KFSDANKLGEGGFGPV---YKGVLKNGDEIAVKRLSGRSGQG-----LRELKNKLR---- 96
++++ + +GEG +G V Y V N +A+K++S Q LRE+K LR
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHE 81
Query: 97 ---------------------LLGCCIDKD-EKILIYEYMPNKSLDFFLFDWVTRVRIIE 134
++ ++ D K+L +++ N + +FL+
Sbjct: 82 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ--------- 132
Query: 135 GIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTG---R 191
I +GL Y+H ++HRDLK SN+LL+ + KI DFG+AR+ + +TG
Sbjct: 133 -ILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPD--HDHTGFLTE 186
Query: 192 IVGTYRYMSPEYAIQGIFSIKS-DVFSFGVLLLKIVSGK 229
V T Y +PE + KS D++S G +L +++S +
Sbjct: 187 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 102/219 (46%), Gaps = 55/219 (25%)
Query: 49 KFSDANKLGEGGFGPV---YKGVLKNGDEIAVKRLSGRSGQG-----LRELKNKLR---- 96
++++ + +GEG +G V Y V N +A+K++S Q LRE+K LR
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHE 81
Query: 97 ---------------------LLGCCIDKD-EKILIYEYMPNKSLDFFLFDWVTRVRIIE 134
++ ++ D K+L +++ N + +FL+
Sbjct: 82 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ--------- 132
Query: 135 GIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTG---R 191
I +GL Y+H ++HRDLK SN+LL+ + KI DFG+AR+ + +TG
Sbjct: 133 -ILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPD--HDHTGFLTE 186
Query: 192 IVGTYRYMSPEYAIQGIFSIKS-DVFSFGVLLLKIVSGK 229
V T Y +PE + KS D++S G +L +++S +
Sbjct: 187 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 92/198 (46%), Gaps = 29/198 (14%)
Query: 56 LGEGGFGPVYKGV-LKNGDEIAVKRLSGRSG---QGLRE---------LKNKLRLLGCCI 102
LG+G +G VY G L N IA+K + R Q L E KN ++ LG
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 89
Query: 103 DKDEKILIYEYMPNKSLDFFLFDWVTRVRIIEG--------IAQGLLYLHQYSRVRIIHR 154
+ + E +P SL L ++ E I +GL YLH +I+HR
Sbjct: 90 ENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHR 146
Query: 155 DLKVSNILLDKDMNP-KISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGI--FSI 211
D+K N+L++ KISDFG ++ G + T GT +YM+PE +G +
Sbjct: 147 DIKGDNVLINTYSGVLKISDFGTSKRLAG--INPCTETFTGTLQYMAPEIIDKGPRGYGK 204
Query: 212 KSDVFSFGVLLLKIVSGK 229
+D++S G ++++ +GK
Sbjct: 205 AADIWSLGCTIIEMATGK 222
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 77/149 (51%), Gaps = 25/149 (16%)
Query: 123 LFDWVTRV---------RIIEGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISD 173
LFD++T +I+ + + + LH ++ I+HRDLK NILLD DMN K++D
Sbjct: 111 LFDYLTEKVTLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTD 167
Query: 174 FGIA-RICRGNELQANTGRIVGTYRYMSPEYAIQGI------FSIKSDVFSFGVLLLKIV 226
FG + ++ G +L+ + GT Y++PE + + + D++S GV++ ++
Sbjct: 168 FGFSCQLDPGEKLR----EVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLL 223
Query: 227 SGKKTTGFYRTYSFTLLGYISENIYEFPS 255
+G + F+ +L I Y+F S
Sbjct: 224 AG--SPPFWHRKQMLMLRMIMSGNYQFGS 250
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 104/217 (47%), Gaps = 41/217 (18%)
Query: 42 SVSTATNKFSDANKLGEGGFGPVYKGV-LKNGDEIAVKRLSGRSGQGLRELKN---KLRL 97
++ ++ + + +G G +G V K G +AVK+LS R Q + K +LRL
Sbjct: 21 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRL 79
Query: 98 LGCCIDKDEKILIYEYMPNKSL----DFFLFDWVTRVR--------------------II 133
L ++ L+ + P +SL D +L VT + +I
Sbjct: 80 LKHMKHENVIGLLDVFTPARSLEEFNDVYL---VTHLMGADLNNIVKCQKLTDDHVQFLI 136
Query: 134 EGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIV 193
I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR +E+ TG V
Sbjct: 137 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHT-DDEM---TG-YV 188
Query: 194 GTYRYMSPEYAIQGI-FSIKSDVFSFGVLLLKIVSGK 229
T Y +PE + + ++ D++S G ++ ++++G+
Sbjct: 189 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 104/217 (47%), Gaps = 41/217 (18%)
Query: 42 SVSTATNKFSDANKLGEGGFGPVYKGV-LKNGDEIAVKRLSGRSGQGLRELKN---KLRL 97
++ ++ + + +G G +G V K G +AVK+LS R Q + K +LRL
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRL 74
Query: 98 LGCCIDKDEKILIYEYMPNKSL----DFFLFDWVTRVR--------------------II 133
L ++ L+ + P +SL D +L VT + +I
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYL---VTHLMGADLNNIVKCQKLTDDHVQFLI 131
Query: 134 EGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIV 193
I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR +E+ TG V
Sbjct: 132 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHT-DDEM---TG-YV 183
Query: 194 GTYRYMSPEYAIQGI-FSIKSDVFSFGVLLLKIVSGK 229
T Y +PE + + ++ D++S G ++ ++++G+
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 104/217 (47%), Gaps = 41/217 (18%)
Query: 42 SVSTATNKFSDANKLGEGGFGPVYKGV-LKNGDEIAVKRLSGRSGQGLRELKN---KLRL 97
++ ++ + + +G G +G V K G +AVK+LS R Q + K +LRL
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRL 74
Query: 98 LGCCIDKDEKILIYEYMPNKSL----DFFLFDWVTRVR--------------------II 133
L ++ L+ + P +SL D +L VT + +I
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYL---VTHLMGADLNNIVKCQKLTDDHVQFLI 131
Query: 134 EGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIV 193
I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR +E+ TG V
Sbjct: 132 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHT-DDEM---TG-XV 183
Query: 194 GTYRYMSPEYAIQGI-FSIKSDVFSFGVLLLKIVSGK 229
T Y +PE + + ++ D++S G ++ ++++G+
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 104/217 (47%), Gaps = 41/217 (18%)
Query: 42 SVSTATNKFSDANKLGEGGFGPVYKGV-LKNGDEIAVKRLSGRSGQGLRELKN---KLRL 97
++ ++ + + +G G +G V K G +AVK+LS R Q + K +LRL
Sbjct: 13 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRL 71
Query: 98 LGCCIDKDEKILIYEYMPNKSL----DFFLFDWVTRVR--------------------II 133
L ++ L+ + P +SL D +L VT + +I
Sbjct: 72 LKHMKHENVIGLLDVFTPARSLEEFNDVYL---VTHLMGADLNNIVKCQKLTDDHVQFLI 128
Query: 134 EGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIV 193
I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR +E+ TG V
Sbjct: 129 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHT-DDEM---TG-YV 180
Query: 194 GTYRYMSPEYAIQGI-FSIKSDVFSFGVLLLKIVSGK 229
T Y +PE + + ++ D++S G ++ ++++G+
Sbjct: 181 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 104/214 (48%), Gaps = 35/214 (16%)
Query: 42 SVSTATNKFSDANKLGEGGFGPVYKGV-LKNGDEIAVKRLSGRSGQGLRELKN---KLRL 97
++ ++ + + +G G +G V K G +AVK+LS R Q + K +LRL
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRL 74
Query: 98 LGCCIDKDEKILIYEYMPNKSLDFF-------------LFDWVTRVRI--------IEGI 136
L ++ L+ + P +SL+ F L + V ++ I I
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQI 134
Query: 137 AQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTY 196
+GL Y+H IIHRDLK SN+ +++D KI DFG+AR +E+ TG V T
Sbjct: 135 LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHT-DDEM---TG-YVATR 186
Query: 197 RYMSPEYAIQGI-FSIKSDVFSFGVLLLKIVSGK 229
Y +PE + + ++ D++S G ++ ++++G+
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 104/217 (47%), Gaps = 41/217 (18%)
Query: 42 SVSTATNKFSDANKLGEGGFGPVYKGV-LKNGDEIAVKRLSGRSGQGLRELKN---KLRL 97
++ ++ + + +G G +G V K G +AVK+LS R Q + K +LRL
Sbjct: 23 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRL 81
Query: 98 LGCCIDKDEKILIYEYMPNKSL----DFFLFDWVTRVR--------------------II 133
L ++ L+ + P +SL D +L VT + +I
Sbjct: 82 LKHMKHENVIGLLDVFTPARSLEEFNDVYL---VTHLMGADLNNIVKCQKLTDDHVQFLI 138
Query: 134 EGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIV 193
I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR +E+ TG V
Sbjct: 139 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHT-DDEM---TG-YV 190
Query: 194 GTYRYMSPEYAIQGI-FSIKSDVFSFGVLLLKIVSGK 229
T Y +PE + + ++ D++S G ++ ++++G+
Sbjct: 191 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 104/217 (47%), Gaps = 41/217 (18%)
Query: 42 SVSTATNKFSDANKLGEGGFGPVYKGV-LKNGDEIAVKRLSGRSGQGLRELKN---KLRL 97
++ ++ + + +G G +G V K G +AVK+LS R Q + K +LRL
Sbjct: 22 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRL 80
Query: 98 LGCCIDKDEKILIYEYMPNKSL----DFFLFDWVTRVR--------------------II 133
L ++ L+ + P +SL D +L VT + +I
Sbjct: 81 LKHMKHENVIGLLDVFTPARSLEEFNDVYL---VTHLMGADLNNIVKCQKLTDDHVQFLI 137
Query: 134 EGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIV 193
I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR +E+ TG V
Sbjct: 138 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHT-DDEM---TG-YV 189
Query: 194 GTYRYMSPEYAIQGI-FSIKSDVFSFGVLLLKIVSGK 229
T Y +PE + + ++ D++S G ++ ++++G+
Sbjct: 190 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 104/217 (47%), Gaps = 41/217 (18%)
Query: 42 SVSTATNKFSDANKLGEGGFGPVYKGV-LKNGDEIAVKRLSGRSGQGLRELKN---KLRL 97
++ ++ + + +G G +G V K G +AVK+LS R Q + K +LRL
Sbjct: 13 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRL 71
Query: 98 LGCCIDKDEKILIYEYMPNKSL----DFFLFDWVTRVR--------------------II 133
L ++ L+ + P +SL D +L VT + +I
Sbjct: 72 LKHMKHENVIGLLDVFTPARSLEEFNDVYL---VTHLMGADLNNIVKCQKLTDDHVQFLI 128
Query: 134 EGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIV 193
I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR +E+ TG V
Sbjct: 129 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHT-DDEM---TG-YV 180
Query: 194 GTYRYMSPEYAIQGI-FSIKSDVFSFGVLLLKIVSGK 229
T Y +PE + + ++ D++S G ++ ++++G+
Sbjct: 181 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 104/217 (47%), Gaps = 41/217 (18%)
Query: 42 SVSTATNKFSDANKLGEGGFGPVYKGV-LKNGDEIAVKRLSGRSGQGLRELKN---KLRL 97
++ ++ + + +G G +G V K G +AVK+LS R Q + K +LRL
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRL 74
Query: 98 LGCCIDKDEKILIYEYMPNKSL----DFFLFDWVTRVR--------------------II 133
L ++ L+ + P +SL D +L VT + +I
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYL---VTHLMGADLNNIVKCQKLTDDHVQFLI 131
Query: 134 EGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIV 193
I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR +E+ TG V
Sbjct: 132 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHT-DDEM---TG-YV 183
Query: 194 GTYRYMSPEYAIQGI-FSIKSDVFSFGVLLLKIVSGK 229
T Y +PE + + ++ D++S G ++ ++++G+
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 102/219 (46%), Gaps = 55/219 (25%)
Query: 49 KFSDANKLGEGGFGPV---YKGVLKNGDEIAVKRLSGRSGQG-----LRELKNKLR---- 96
++++ + +GEG +G V Y V N +A+K++S Q LRE+K LR
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHE 81
Query: 97 ---------------------LLGCCIDKD-EKILIYEYMPNKSLDFFLFDWVTRVRIIE 134
++ ++ D K+L +++ N + +FL+
Sbjct: 82 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ--------- 132
Query: 135 GIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTG---R 191
I +GL Y+H ++HRDLK SN+LL+ + KI DFG+AR+ + +TG
Sbjct: 133 -ILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD--HDHTGFLTE 186
Query: 192 IVGTYRYMSPEYAIQGIFSIKS-DVFSFGVLLLKIVSGK 229
V T Y +PE + KS D++S G +L +++S +
Sbjct: 187 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 104/217 (47%), Gaps = 41/217 (18%)
Query: 42 SVSTATNKFSDANKLGEGGFGPVYKGV-LKNGDEIAVKRLSGRSGQGLRELKN---KLRL 97
++ ++ + + +G G +G V K G +AVK+LS R Q + K +LRL
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRL 74
Query: 98 LGCCIDKDEKILIYEYMPNKSL----DFFLFDWVTRVR--------------------II 133
L ++ L+ + P +SL D +L VT + +I
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYL---VTHLMGADLNNIVKCQKLTDDHVQFLI 131
Query: 134 EGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIV 193
I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR +E+ TG V
Sbjct: 132 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHT-DDEM---TG-YV 183
Query: 194 GTYRYMSPEYAIQGI-FSIKSDVFSFGVLLLKIVSGK 229
T Y +PE + + ++ D++S G ++ ++++G+
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 104/217 (47%), Gaps = 41/217 (18%)
Query: 42 SVSTATNKFSDANKLGEGGFGPVYKGV-LKNGDEIAVKRLSGRSGQGLRELKN---KLRL 97
++ ++ + + +G G +G V K G +AVK+LS R Q + K +LRL
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRL 74
Query: 98 LGCCIDKDEKILIYEYMPNKSL----DFFLFDWVTRVR--------------------II 133
L ++ L+ + P +SL D +L VT + +I
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYL---VTHLMGADLNNIVKCQKLTDDHVQFLI 131
Query: 134 EGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIV 193
I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR +E+ TG V
Sbjct: 132 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHT-DDEM---TG-YV 183
Query: 194 GTYRYMSPEYAIQGI-FSIKSDVFSFGVLLLKIVSGK 229
T Y +PE + + ++ D++S G ++ ++++G+
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 104/217 (47%), Gaps = 41/217 (18%)
Query: 42 SVSTATNKFSDANKLGEGGFGPVYKGV-LKNGDEIAVKRLSGRSGQGLRELKN---KLRL 97
++ ++ + + +G G +G V K G +AVK+LS R Q + K +LRL
Sbjct: 22 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRL 80
Query: 98 LGCCIDKDEKILIYEYMPNKSL----DFFLFDWVTRVR--------------------II 133
L ++ L+ + P +SL D +L VT + +I
Sbjct: 81 LKHMKHENVIGLLDVFTPARSLEEFNDVYL---VTHLMGADLNNIVKCQKLTDDHVQFLI 137
Query: 134 EGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIV 193
I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR +E+ TG V
Sbjct: 138 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHT-DDEM---TG-YV 189
Query: 194 GTYRYMSPEYAIQGI-FSIKSDVFSFGVLLLKIVSGK 229
T Y +PE + + ++ D++S G ++ ++++G+
Sbjct: 190 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 104/217 (47%), Gaps = 41/217 (18%)
Query: 42 SVSTATNKFSDANKLGEGGFGPVYKGV-LKNGDEIAVKRLSGRSGQGLRELKN---KLRL 97
++ ++ + + +G G +G V K G +AVK+LS R Q + K +LRL
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRL 74
Query: 98 LGCCIDKDEKILIYEYMPNKSL----DFFLFDWVTRVR--------------------II 133
L ++ L+ + P +SL D +L VT + +I
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYL---VTHLMGADLNNIVKCQKLTDDHVQFLI 131
Query: 134 EGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIV 193
I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR +E+ TG V
Sbjct: 132 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHT-DDEM---TG-YV 183
Query: 194 GTYRYMSPEYAIQGI-FSIKSDVFSFGVLLLKIVSGK 229
T Y +PE + + ++ D++S G ++ ++++G+
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 101/219 (46%), Gaps = 55/219 (25%)
Query: 49 KFSDANKLGEGGFGPV---YKGVLKNGDEIAVKRLSGRSGQG-----LRELKNKLR---- 96
++++ + +GEG +G V Y V N +A+K++S Q LRE+K LR
Sbjct: 44 RYTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHE 101
Query: 97 ---------------------LLGCCIDKD-EKILIYEYMPNKSLDFFLFDWVTRVRIIE 134
L+ + D K+L +++ N + +FL+
Sbjct: 102 NIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQ--------- 152
Query: 135 GIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTG---R 191
I +GL Y+H ++HRDLK SN+LL+ + KI DFG+AR+ + +TG
Sbjct: 153 -ILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPD--HDHTGFLTE 206
Query: 192 IVGTYRYMSPEYAIQGIFSIKS-DVFSFGVLLLKIVSGK 229
V T Y +PE + KS D++S G +L +++S +
Sbjct: 207 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 104/217 (47%), Gaps = 41/217 (18%)
Query: 42 SVSTATNKFSDANKLGEGGFGPVYKGV-LKNGDEIAVKRLSGRSGQGLRELKN---KLRL 97
++ ++ + + +G G +G V K G +AVK+LS R Q + K +LRL
Sbjct: 12 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRL 70
Query: 98 LGCCIDKDEKILIYEYMPNKSL----DFFLFDWVTRVR--------------------II 133
L ++ L+ + P +SL D +L VT + +I
Sbjct: 71 LKHMKHENVIGLLDVFTPARSLEEFNDVYL---VTHLMGADLNNIVKCQKLTDDHVQFLI 127
Query: 134 EGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIV 193
I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR +E+ TG V
Sbjct: 128 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHT-DDEM---TG-YV 179
Query: 194 GTYRYMSPEYAIQGI-FSIKSDVFSFGVLLLKIVSGK 229
T Y +PE + + ++ D++S G ++ ++++G+
Sbjct: 180 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 104/217 (47%), Gaps = 41/217 (18%)
Query: 42 SVSTATNKFSDANKLGEGGFGPVYKGV-LKNGDEIAVKRLSGRSGQGLRELKN---KLRL 97
++ ++ + + +G G +G V K G +AVK+LS R Q + K +LRL
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRL 74
Query: 98 LGCCIDKDEKILIYEYMPNKSL----DFFLFDWVTRVR--------------------II 133
L ++ L+ + P +SL D +L VT + +I
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYL---VTHLMGADLNNIVKCQKLTDDHVQFLI 131
Query: 134 EGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIV 193
I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR +E+ TG V
Sbjct: 132 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHT-DDEM---TG-YV 183
Query: 194 GTYRYMSPEYAIQGI-FSIKSDVFSFGVLLLKIVSGK 229
T Y +PE + + ++ D++S G ++ ++++G+
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 104/217 (47%), Gaps = 41/217 (18%)
Query: 42 SVSTATNKFSDANKLGEGGFGPVYKGV-LKNGDEIAVKRLSGRSGQGLRELKN---KLRL 97
++ ++ + + +G G +G V K G +AVK+LS R Q + K +LRL
Sbjct: 18 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRL 76
Query: 98 LGCCIDKDEKILIYEYMPNKSL----DFFLFDWVTRVR--------------------II 133
L ++ L+ + P +SL D +L VT + +I
Sbjct: 77 LKHMKHENVIGLLDVFTPARSLEEFNDVYL---VTHLMGADLNNIVKCQKLTDDHVQFLI 133
Query: 134 EGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIV 193
I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR +E+ TG V
Sbjct: 134 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHT-DDEM---TG-YV 185
Query: 194 GTYRYMSPEYAIQGI-FSIKSDVFSFGVLLLKIVSGK 229
T Y +PE + + ++ D++S G ++ ++++G+
Sbjct: 186 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 104/217 (47%), Gaps = 41/217 (18%)
Query: 42 SVSTATNKFSDANKLGEGGFGPVYKGV-LKNGDEIAVKRLSGRSGQGLRELKN---KLRL 97
++ ++ + + +G G +G V K G +AVK+LS R Q + K +LRL
Sbjct: 21 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRL 79
Query: 98 LGCCIDKDEKILIYEYMPNKSL----DFFLFDWVTRVR--------------------II 133
L ++ L+ + P +SL D +L VT + +I
Sbjct: 80 LKHMKHENVIGLLDVFTPARSLEEFNDVYL---VTHLMGADLNNIVKCQKLTDDHVQFLI 136
Query: 134 EGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIV 193
I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR +E+ TG V
Sbjct: 137 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHT-DDEM---TG-YV 188
Query: 194 GTYRYMSPEYAIQGI-FSIKSDVFSFGVLLLKIVSGK 229
T Y +PE + + ++ D++S G ++ ++++G+
Sbjct: 189 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 104/217 (47%), Gaps = 41/217 (18%)
Query: 42 SVSTATNKFSDANKLGEGGFGPVYKGV-LKNGDEIAVKRLSGRSGQGLRELKN---KLRL 97
++ ++ + + +G G +G V K G +AVK+LS R Q + K +LRL
Sbjct: 15 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRL 73
Query: 98 LGCCIDKDEKILIYEYMPNKSL----DFFLFDWVTRVR--------------------II 133
L ++ L+ + P +SL D +L VT + +I
Sbjct: 74 LKHMKHENVIGLLDVFTPARSLEEFNDVYL---VTHLMGADLNNIVKCQKLTDDHVQFLI 130
Query: 134 EGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIV 193
I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR +E+ TG V
Sbjct: 131 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHT-DDEM---TG-YV 182
Query: 194 GTYRYMSPEYAIQGI-FSIKSDVFSFGVLLLKIVSGK 229
T Y +PE + + ++ D++S G ++ ++++G+
Sbjct: 183 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 104/217 (47%), Gaps = 41/217 (18%)
Query: 42 SVSTATNKFSDANKLGEGGFGPVYKGV-LKNGDEIAVKRLSGRSGQGLRELKN---KLRL 97
++ ++ + + +G G +G V K G +AVK+LS R Q + K +LRL
Sbjct: 14 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRL 72
Query: 98 LGCCIDKDEKILIYEYMPNKSL----DFFLFDWVTRVR--------------------II 133
L ++ L+ + P +SL D +L VT + +I
Sbjct: 73 LKHMKHENVIGLLDVFTPARSLEEFNDVYL---VTHLMGADLNNIVKCQKLTDDHVQFLI 129
Query: 134 EGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIV 193
I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR +E+ TG V
Sbjct: 130 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHT-DDEM---TG-YV 181
Query: 194 GTYRYMSPEYAIQGI-FSIKSDVFSFGVLLLKIVSGK 229
T Y +PE + + ++ D++S G ++ ++++G+
Sbjct: 182 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 104/217 (47%), Gaps = 41/217 (18%)
Query: 42 SVSTATNKFSDANKLGEGGFGPVYKGV-LKNGDEIAVKRLSGRSGQGLRELKN---KLRL 97
++ ++ + + +G G +G V K G +AVK+LS R Q + K +LRL
Sbjct: 18 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRL 76
Query: 98 LGCCIDKDEKILIYEYMPNKSL----DFFLFDWVTRVR--------------------II 133
L ++ L+ + P +SL D +L VT + +I
Sbjct: 77 LKHMKHENVIGLLDVFTPARSLEEFNDVYL---VTHLMGADLNNIVKCQKLTDDHVQFLI 133
Query: 134 EGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIV 193
I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR +E+ TG V
Sbjct: 134 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHT-DDEM---TG-YV 185
Query: 194 GTYRYMSPEYAIQGI-FSIKSDVFSFGVLLLKIVSGK 229
T Y +PE + + ++ D++S G ++ ++++G+
Sbjct: 186 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 104/217 (47%), Gaps = 41/217 (18%)
Query: 42 SVSTATNKFSDANKLGEGGFGPVYKGV-LKNGDEIAVKRLSGRSGQGLRELKN---KLRL 97
++ ++ + + +G G +G V K G +AVK+LS R Q + K +LRL
Sbjct: 18 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRL 76
Query: 98 LGCCIDKDEKILIYEYMPNKSL----DFFLFDWVTRVR--------------------II 133
L ++ L+ + P +SL D +L VT + +I
Sbjct: 77 LKHMKHENVIGLLDVFTPARSLEEFNDVYL---VTHLMGADLNNIVKCQKLTDDHVQFLI 133
Query: 134 EGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIV 193
I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR +E+ TG V
Sbjct: 134 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLARHT-DDEM---TG-YV 185
Query: 194 GTYRYMSPEYAIQGI-FSIKSDVFSFGVLLLKIVSGK 229
T Y +PE + + ++ D++S G ++ ++++G+
Sbjct: 186 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 104/217 (47%), Gaps = 41/217 (18%)
Query: 42 SVSTATNKFSDANKLGEGGFGPVYKGV-LKNGDEIAVKRLSGRSGQGLRELKN---KLRL 97
++ ++ + + +G G +G V K G +AVK+LS R Q + K +LRL
Sbjct: 27 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRL 85
Query: 98 LGCCIDKDEKILIYEYMPNKSL----DFFLFDWVTRVR--------------------II 133
L ++ L+ + P +SL D +L VT + +I
Sbjct: 86 LKHMKHENVIGLLDVFTPARSLEEFNDVYL---VTHLMGADLNNIVKCQKLTDDHVQFLI 142
Query: 134 EGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIV 193
I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR +E+ TG V
Sbjct: 143 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLARHT-DDEM---TG-YV 194
Query: 194 GTYRYMSPEYAIQGI-FSIKSDVFSFGVLLLKIVSGK 229
T Y +PE + + ++ D++S G ++ ++++G+
Sbjct: 195 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 104/217 (47%), Gaps = 41/217 (18%)
Query: 42 SVSTATNKFSDANKLGEGGFGPVYKGV-LKNGDEIAVKRLSGRSGQGLRELKN---KLRL 97
++ ++ + + +G G +G V K G +AVK+LS R Q + K +LRL
Sbjct: 18 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRL 76
Query: 98 LGCCIDKDEKILIYEYMPNKSL----DFFLFDWVTRVR--------------------II 133
L ++ L+ + P +SL D +L VT + +I
Sbjct: 77 LKHMKHENVIGLLDVFTPARSLEEFNDVYL---VTHLMGADLNNIVKCQKLTDDHVQFLI 133
Query: 134 EGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIV 193
I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR +E+ TG V
Sbjct: 134 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHT-DDEM---TG-YV 185
Query: 194 GTYRYMSPEYAIQGI-FSIKSDVFSFGVLLLKIVSGK 229
T Y +PE + + ++ D++S G ++ ++++G+
Sbjct: 186 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 102/219 (46%), Gaps = 55/219 (25%)
Query: 49 KFSDANKLGEGGFGPV---YKGVLKNGDEIAVKRLSGRSGQG-----LRELKNKLR---- 96
++++ + +GEG +G V Y V N +A+K++S Q LRE+K LR
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHE 83
Query: 97 ---------------------LLGCCIDKD-EKILIYEYMPNKSLDFFLFDWVTRVRIIE 134
++ ++ D K+L +++ N + +FL+
Sbjct: 84 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ--------- 134
Query: 135 GIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTG---R 191
I +GL Y+H ++HRDLK SN+LL+ + KI DFG+AR+ + +TG
Sbjct: 135 -ILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD--HDHTGFLTE 188
Query: 192 IVGTYRYMSPEYAIQGIFSIKS-DVFSFGVLLLKIVSGK 229
V T Y +PE + KS D++S G +L +++S +
Sbjct: 189 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 104/217 (47%), Gaps = 41/217 (18%)
Query: 42 SVSTATNKFSDANKLGEGGFGPVYKGV-LKNGDEIAVKRLSGRSGQGLRELKN---KLRL 97
++ ++ + + +G G +G V K G +AVK+LS R Q + K +LRL
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRL 74
Query: 98 LGCCIDKDEKILIYEYMPNKSL----DFFLFDWVTRVR--------------------II 133
L ++ L+ + P +SL D +L VT + +I
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYL---VTHLMGADLNNIVKCQKLTDDHVQFLI 131
Query: 134 EGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIV 193
I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR +E+ TG V
Sbjct: 132 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHT-DDEM---TG-YV 183
Query: 194 GTYRYMSPEYAIQGI-FSIKSDVFSFGVLLLKIVSGK 229
T Y +PE + + ++ D++S G ++ ++++G+
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 104/217 (47%), Gaps = 41/217 (18%)
Query: 42 SVSTATNKFSDANKLGEGGFGPVYKGV-LKNGDEIAVKRLSGRSGQGLRELKN---KLRL 97
++ ++ + + +G G +G V K G +AVK+LS R Q + K +LRL
Sbjct: 22 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRL 80
Query: 98 LGCCIDKDEKILIYEYMPNKSL----DFFLFDWVTRVR--------------------II 133
L ++ L+ + P +SL D +L VT + +I
Sbjct: 81 LKHMKHENVIGLLDVFTPARSLEEFNDVYL---VTHLMGADLNNIVKCQKLTDDHVQFLI 137
Query: 134 EGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIV 193
I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR +E+ TG V
Sbjct: 138 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLARHT-DDEM---TG-YV 189
Query: 194 GTYRYMSPEYAIQGI-FSIKSDVFSFGVLLLKIVSGK 229
T Y +PE + + ++ D++S G ++ ++++G+
Sbjct: 190 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 95/204 (46%), Gaps = 30/204 (14%)
Query: 56 LGEGGFGPVYKGVLKN--GDEI--AVKRLSGRSGQGLRE--------LKNK-----LRLL 98
LGEG FG VY+GV N G++I AVK +E +KN ++L+
Sbjct: 16 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 75
Query: 99 GCCIDKDEKILIYEYMPNKSLDFFL------FDWVTRVRIIEGIAQGLLYLHQYSRVRII 152
G I+++ +I E P L +L +T V I + + YL + +
Sbjct: 76 GI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLES---INCV 131
Query: 153 HRDLKVSNILLDKDMNPKISDFGIARICRGNE-LQANTGRIVGTYRYMSPEYAIQGIFSI 211
HRD+ V NIL+ K+ DFG++R + +A+ R+ ++MSPE F+
Sbjct: 132 HRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL--PIKWMSPESINFRRFTT 189
Query: 212 KSDVFSFGVLLLKIVSGKKTTGFY 235
SDV+ F V + +I+S K F+
Sbjct: 190 ASDVWMFAVCMWEILSFGKQPFFW 213
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 102/247 (41%), Gaps = 65/247 (26%)
Query: 31 EVDQLPLFSFSSVSTATNKFSDANKLGEGGFGPVY--------KGVLKNGDEIAVKRLSG 82
E+ + P + F +K + LGEG FG V K K +AVK L
Sbjct: 23 ELPEDPKWEFPR-----DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD 77
Query: 83 RSGQ-GLREL-------------KNKLRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVT 128
+ + L +L KN + LLG C +I Y +L +L
Sbjct: 78 DATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYL----- 132
Query: 129 RVRIIEG--------------------------IAQGLLYLHQYSRVRIIHRDLKVSNIL 162
R R G +A+G+ YL + + IHRDL N+L
Sbjct: 133 RARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVL 189
Query: 163 LDKDMNPKISDFGIARICRGNELQANT--GRIVGTYRYMSPEYAIQGIFSIKSDVFSFGV 220
+ ++ KI+DFG+AR + T GR+ ++M+PE +++ +SDV+SFGV
Sbjct: 190 VTENNVMKIADFGLARDINNIDYYKKTTNGRL--PVKWMAPEALFDRVYTHQSDVWSFGV 247
Query: 221 LLLKIVS 227
L+ +I +
Sbjct: 248 LMWEIFT 254
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 104/217 (47%), Gaps = 41/217 (18%)
Query: 42 SVSTATNKFSDANKLGEGGFGPVYKGV-LKNGDEIAVKRLSGRSGQGLRELKN---KLRL 97
++ ++ + + +G G +G V K G +AVK+LS R Q + K +LRL
Sbjct: 39 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRL 97
Query: 98 LGCCIDKDEKILIYEYMPNKSL----DFFLFDWVTRVR--------------------II 133
L ++ L+ + P +SL D +L VT + +I
Sbjct: 98 LKHMKHENVIGLLDVFTPARSLEEFNDVYL---VTHLMGADLNNIVKCQKLTDDHVQFLI 154
Query: 134 EGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIV 193
I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR +E+ TG V
Sbjct: 155 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHT-DDEM---TG-YV 206
Query: 194 GTYRYMSPEYAIQGI-FSIKSDVFSFGVLLLKIVSGK 229
T Y +PE + + ++ D++S G ++ ++++G+
Sbjct: 207 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 104/217 (47%), Gaps = 41/217 (18%)
Query: 42 SVSTATNKFSDANKLGEGGFGPVYKGV-LKNGDEIAVKRLSGRSGQGLRELKN---KLRL 97
++ ++ + + +G G +G V K G +AVK+LS R Q + K +LRL
Sbjct: 28 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRL 86
Query: 98 LGCCIDKDEKILIYEYMPNKSL----DFFLFDWVTRVR--------------------II 133
L ++ L+ + P +SL D +L VT + +I
Sbjct: 87 LKHMKHENVIGLLDVFTPARSLEEFNDVYL---VTHLMGADLNNIVKCQKLTDDHVQFLI 143
Query: 134 EGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIV 193
I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR +E+ TG V
Sbjct: 144 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHT-DDEM---TG-YV 195
Query: 194 GTYRYMSPEYAIQGI-FSIKSDVFSFGVLLLKIVSGK 229
T Y +PE + + ++ D++S G ++ ++++G+
Sbjct: 196 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 104/217 (47%), Gaps = 41/217 (18%)
Query: 42 SVSTATNKFSDANKLGEGGFGPVYKGV-LKNGDEIAVKRLSGRSGQGLRELKN---KLRL 97
++ ++ + + +G G +G V K G +AVK+LS R Q + K +LRL
Sbjct: 28 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRL 86
Query: 98 LGCCIDKDEKILIYEYMPNKSL----DFFLFDWVTRVR--------------------II 133
L ++ L+ + P +SL D +L VT + +I
Sbjct: 87 LKHMKHENVIGLLDVFTPARSLEEFNDVYL---VTHLMGADLNNIVKCQKLTDDHVQFLI 143
Query: 134 EGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIV 193
I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR +E+ TG V
Sbjct: 144 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHT-DDEM---TG-YV 195
Query: 194 GTYRYMSPEYAIQGI-FSIKSDVFSFGVLLLKIVSGK 229
T Y +PE + + ++ D++S G ++ ++++G+
Sbjct: 196 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 92/198 (46%), Gaps = 29/198 (14%)
Query: 56 LGEGGFGPVYKGV-LKNGDEIAVKRLSGRSG---QGLRE---------LKNKLRLLGCCI 102
LG+G +G VY G L N IA+K + R Q L E KN ++ LG
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 75
Query: 103 DKDEKILIYEYMPNKSLDFFLFDWVTRVRIIEG--------IAQGLLYLHQYSRVRIIHR 154
+ + E +P SL L ++ E I +GL YLH +I+HR
Sbjct: 76 ENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHR 132
Query: 155 DLKVSNILLDKDMNP-KISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGI--FSI 211
D+K N+L++ KISDFG ++ G + T GT +YM+PE +G +
Sbjct: 133 DIKGDNVLINTYSGVLKISDFGTSKRLAG--INPCTETFTGTLQYMAPEIIDKGPRGYGK 190
Query: 212 KSDVFSFGVLLLKIVSGK 229
+D++S G ++++ +GK
Sbjct: 191 AADIWSLGCTIIEMATGK 208
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 104/217 (47%), Gaps = 41/217 (18%)
Query: 42 SVSTATNKFSDANKLGEGGFGPVYKGV-LKNGDEIAVKRLSGRSGQGLRELKN---KLRL 97
++ ++ + + +G G +G V K G +AVK+LS R Q + K +LRL
Sbjct: 35 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRL 93
Query: 98 LGCCIDKDEKILIYEYMPNKSL----DFFLFDWVTRVR--------------------II 133
L ++ L+ + P +SL D +L VT + +I
Sbjct: 94 LKHMKHENVIGLLDVFTPARSLEEFNDVYL---VTHLMGADLNNIVKCQKLTDDHVQFLI 150
Query: 134 EGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIV 193
I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR +E+ TG V
Sbjct: 151 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHT-DDEM---TG-YV 202
Query: 194 GTYRYMSPEYAIQGI-FSIKSDVFSFGVLLLKIVSGK 229
T Y +PE + + ++ D++S G ++ ++++G+
Sbjct: 203 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 102/219 (46%), Gaps = 55/219 (25%)
Query: 49 KFSDANKLGEGGFGPV---YKGVLKNGDEIAVKRLSGRSGQG-----LRELKNKLR---- 96
++++ + +GEG +G V Y V N +A+K++S Q LRE+K LR
Sbjct: 32 RYTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHE 89
Query: 97 ---------------------LLGCCIDKD-EKILIYEYMPNKSLDFFLFDWVTRVRIIE 134
++ ++ D K+L +++ N + +FL+
Sbjct: 90 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ--------- 140
Query: 135 GIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTG---R 191
I +GL Y+H ++HRDLK SN+LL+ + KI DFG+AR+ + +TG
Sbjct: 141 -ILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD--HDHTGFLTE 194
Query: 192 IVGTYRYMSPEYAIQGIFSIKS-DVFSFGVLLLKIVSGK 229
V T Y +PE + KS D++S G +L +++S +
Sbjct: 195 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 102/219 (46%), Gaps = 55/219 (25%)
Query: 49 KFSDANKLGEGGFGPV---YKGVLKNGDEIAVKRLSGRSGQG-----LRELKNKLR---- 96
++++ + +GEG +G V Y V N +A+K++S Q LRE+K LR
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHE 81
Query: 97 ---------------------LLGCCIDKD-EKILIYEYMPNKSLDFFLFDWVTRVRIIE 134
++ ++ D K+L +++ N + +FL+
Sbjct: 82 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ--------- 132
Query: 135 GIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTG---R 191
I +GL Y+H ++HRDLK SN+LL+ + KI DFG+AR+ + +TG
Sbjct: 133 -ILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD--HDHTGFLTE 186
Query: 192 IVGTYRYMSPEYAIQGIFSIKS-DVFSFGVLLLKIVSGK 229
V T Y +PE + KS D++S G +L +++S +
Sbjct: 187 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 104/217 (47%), Gaps = 41/217 (18%)
Query: 42 SVSTATNKFSDANKLGEGGFGPVYKGV-LKNGDEIAVKRLSGRSGQGLRELKN---KLRL 97
++ ++ + + +G G +G V K G +AVK+LS R Q + K +LRL
Sbjct: 27 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRL 85
Query: 98 LGCCIDKDEKILIYEYMPNKSL----DFFLFDWVTRVR--------------------II 133
L ++ L+ + P +SL D +L VT + +I
Sbjct: 86 LKHMKHENVIGLLDVFTPARSLEEFNDVYL---VTHLMGADLNNIVKCQKLTDDHVQFLI 142
Query: 134 EGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIV 193
I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR +E+ TG V
Sbjct: 143 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHT-DDEM---TG-YV 194
Query: 194 GTYRYMSPEYAIQGI-FSIKSDVFSFGVLLLKIVSGK 229
T Y +PE + + ++ D++S G ++ ++++G+
Sbjct: 195 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 30/213 (14%)
Query: 39 SFSSVSTATNKFSDANKLGEGGFGPVYKGVLKNGDE-IAVKRL------SGRSGQGLREL 91
S + +T+ +++ KLGEG +G VYK + +E +A+KR+ G G +RE+
Sbjct: 25 SAAPSATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREV 84
Query: 92 --------KNKLRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTRVRIIEG----IAQG 139
+N + L LI+EY N + + +R+I+ + G
Sbjct: 85 SLLKELQHRNIIELKSVIHHNHRLHLIFEYAENDLKKYMDKNPDVSMRVIKSFLYQLING 144
Query: 140 LLYLHQYSRVRIIHRDLKVSNILL---DKDMNP--KISDFGIARICRGNELQANTGRIVG 194
+ + H SR R +HRDLK N+LL D P KI DFG+AR G ++ T I+
Sbjct: 145 VNFCH--SR-RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLAR-AFGIPIRQFTHEII- 199
Query: 195 TYRYMSPEYAIQG-IFSIKSDVFSFGVLLLKIV 226
T Y PE + +S D++S + +++
Sbjct: 200 TLWYRPPEILLGSRHYSTSVDIWSIACIWAEML 232
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 95/204 (46%), Gaps = 30/204 (14%)
Query: 56 LGEGGFGPVYKGVLKN--GDEI--AVKRLSGRSGQGLRE--------LKNK-----LRLL 98
LGEG FG VY+GV N G++I AVK +E +KN ++L+
Sbjct: 32 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 91
Query: 99 GCCIDKDEKILIYEYMPNKSLDFFL------FDWVTRVRIIEGIAQGLLYLHQYSRVRII 152
G I+++ +I E P L +L +T V I + + YL + +
Sbjct: 92 GI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLES---INCV 147
Query: 153 HRDLKVSNILLDKDMNPKISDFGIARICRGNE-LQANTGRIVGTYRYMSPEYAIQGIFSI 211
HRD+ V NIL+ K+ DFG++R + +A+ R+ ++MSPE F+
Sbjct: 148 HRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL--PIKWMSPESINFRRFTT 205
Query: 212 KSDVFSFGVLLLKIVSGKKTTGFY 235
SDV+ F V + +I+S K F+
Sbjct: 206 ASDVWMFAVCMWEILSFGKQPFFW 229
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 104/217 (47%), Gaps = 41/217 (18%)
Query: 42 SVSTATNKFSDANKLGEGGFGPVYKGV-LKNGDEIAVKRLSGRSGQGLRELKN---KLRL 97
++ ++ + + +G G +G V K G +AVK+LS R Q + K +LRL
Sbjct: 36 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRL 94
Query: 98 LGCCIDKDEKILIYEYMPNKSL----DFFLFDWVTRVR--------------------II 133
L ++ L+ + P +SL D +L VT + +I
Sbjct: 95 LKHMKHENVIGLLDVFTPARSLEEFNDVYL---VTHLMGADLNNIVKCQKLTDDHVQFLI 151
Query: 134 EGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIV 193
I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR +E+ TG V
Sbjct: 152 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHT-DDEM---TG-YV 203
Query: 194 GTYRYMSPEYAIQGI-FSIKSDVFSFGVLLLKIVSGK 229
T Y +PE + + ++ D++S G ++ ++++G+
Sbjct: 204 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 95/204 (46%), Gaps = 30/204 (14%)
Query: 56 LGEGGFGPVYKGVLKN--GDEI--AVKRLSGRSGQGLRE--------LKNK-----LRLL 98
LGEG FG VY+GV N G++I AVK +E +KN ++L+
Sbjct: 20 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 79
Query: 99 GCCIDKDEKILIYEYMPNKSLDFFL------FDWVTRVRIIEGIAQGLLYLHQYSRVRII 152
G I+++ +I E P L +L +T V I + + YL + +
Sbjct: 80 GI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLES---INCV 135
Query: 153 HRDLKVSNILLDKDMNPKISDFGIARICRGNE-LQANTGRIVGTYRYMSPEYAIQGIFSI 211
HRD+ V NIL+ K+ DFG++R + +A+ R+ ++MSPE F+
Sbjct: 136 HRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL--PIKWMSPESINFRRFTT 193
Query: 212 KSDVFSFGVLLLKIVSGKKTTGFY 235
SDV+ F V + +I+S K F+
Sbjct: 194 ASDVWMFAVCMWEILSFGKQPFFW 217
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 96/220 (43%), Gaps = 43/220 (19%)
Query: 56 LGEGGFGPVYKGVLKNGDEIAVKRLSGRSGQG-LREL----------------------- 91
+G+G +G V++G L +G+ +AVK S R Q RE
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVKIFSSRDEQSWFRETEIYNTVLLRHDNILGFIASDMTS 74
Query: 92 KNKLRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTRVRIIEGIAQGLLYLH-----QY 146
+N L E +Y+++ ++L+ L +R+ A GL +LH
Sbjct: 75 RNSSTQLWLITHYHEHGSLYDFLQRQTLEPHL-----ALRLAVSAACGLAHLHVEIFGTQ 129
Query: 147 SRVRIIHRDLKVSNILLDKDMNPKISDFGIARI-CRGNE-LQANTGRIVGTYRYMSPEYA 204
+ I HRD K N+L+ ++ I+D G+A + +G++ L VGT RYM+PE
Sbjct: 130 GKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPEVL 189
Query: 205 IQGIFS------IKSDVFSFGVLLLKIVSGKKTTGFYRTY 238
+ I + +D+++FG++L +I G Y
Sbjct: 190 DEQIRTDCFESYKWTDIWAFGLVLWEIARRTIVNGIVEDY 229
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 102/219 (46%), Gaps = 55/219 (25%)
Query: 49 KFSDANKLGEGGFGPV---YKGVLKNGDEIAVKRLSGRSGQG-----LRELKNKLR---- 96
++++ + +GEG +G V Y V N +A+K++S Q LRE+K LR
Sbjct: 44 RYTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHE 101
Query: 97 ---------------------LLGCCIDKD-EKILIYEYMPNKSLDFFLFDWVTRVRIIE 134
++ ++ D K+L +++ N + +FL+
Sbjct: 102 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ--------- 152
Query: 135 GIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTG---R 191
I +GL Y+H ++HRDLK SN+LL+ + KI DFG+AR+ + +TG
Sbjct: 153 -ILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD--HDHTGFLTE 206
Query: 192 IVGTYRYMSPEYAIQGIFSIKS-DVFSFGVLLLKIVSGK 229
V T Y +PE + KS D++S G +L +++S +
Sbjct: 207 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 2/99 (2%)
Query: 131 RIIEGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTG 190
+I++ Q L L +I+HRD+K NI L KD ++ DFGIAR+ A
Sbjct: 126 QILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARA- 184
Query: 191 RIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGK 229
+GT Y+SPE ++ KSD+++ G +L ++ + K
Sbjct: 185 -CIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLK 222
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 102/217 (47%), Gaps = 41/217 (18%)
Query: 42 SVSTATNKFSDANKLGEGGFGPVYKGV-LKNGDEIAVKRLSGRSGQGLRELKN---KLRL 97
++ ++ + + +G G +G V K G +AVK+LS R Q + K +LRL
Sbjct: 39 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRL 97
Query: 98 LGCCIDKDEKILIYEYMPNKSL----DFFLFDWVTRVR--------------------II 133
L ++ L+ + P +SL D +L VT + +I
Sbjct: 98 LKHMKHENVIGLLDVFTPARSLEEFNDVYL---VTHLMGADLNNIVKCQKLTDDHVQFLI 154
Query: 134 EGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIV 193
I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR +E+ V
Sbjct: 155 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHT-DDEMXG----YV 206
Query: 194 GTYRYMSPEYAIQGI-FSIKSDVFSFGVLLLKIVSGK 229
T Y +PE + + ++ D++S G ++ ++++G+
Sbjct: 207 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 58/95 (61%), Gaps = 6/95 (6%)
Query: 144 HQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEY 203
H ++R +++RDLK +NILLD+ + +ISD G+A C ++ + + VGT+ YM+PE
Sbjct: 306 HMHNRF-VVYRDLKPANILLDEHGHVRISDLGLA--CDFSKKKPHAS--VGTHGYMAPEV 360
Query: 204 AIQGI-FSIKSDVFSFGVLLLKIVSGKKTTGFYRT 237
+G+ + +D FS G +L K++ G ++T
Sbjct: 361 LQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKT 395
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 58/95 (61%), Gaps = 6/95 (6%)
Query: 144 HQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEY 203
H ++R +++RDLK +NILLD+ + +ISD G+A C ++ + + VGT+ YM+PE
Sbjct: 307 HMHNRF-VVYRDLKPANILLDEHGHVRISDLGLA--CDFSKKKPHAS--VGTHGYMAPEV 361
Query: 204 AIQGI-FSIKSDVFSFGVLLLKIVSGKKTTGFYRT 237
+G+ + +D FS G +L K++ G ++T
Sbjct: 362 LQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKT 396
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 58/95 (61%), Gaps = 6/95 (6%)
Query: 144 HQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEY 203
H ++R +++RDLK +NILLD+ + +ISD G+A C ++ + + VGT+ YM+PE
Sbjct: 307 HMHNRF-VVYRDLKPANILLDEHGHVRISDLGLA--CDFSKKKPHAS--VGTHGYMAPEV 361
Query: 204 AIQGI-FSIKSDVFSFGVLLLKIVSGKKTTGFYRT 237
+G+ + +D FS G +L K++ G ++T
Sbjct: 362 LQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKT 396
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 58/95 (61%), Gaps = 6/95 (6%)
Query: 144 HQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEY 203
H ++R +++RDLK +NILLD+ + +ISD G+A C ++ + + VGT+ YM+PE
Sbjct: 307 HMHNRF-VVYRDLKPANILLDEHGHVRISDLGLA--CDFSKKKPHAS--VGTHGYMAPEV 361
Query: 204 AIQGI-FSIKSDVFSFGVLLLKIVSGKKTTGFYRT 237
+G+ + +D FS G +L K++ G ++T
Sbjct: 362 LQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKT 396
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 98/229 (42%), Gaps = 35/229 (15%)
Query: 45 TATNKFSDANKLGEGGFGPVYKGVLKNGDEIAVKRL-SGRSGQGLRE-------LKNKLR 96
T + ++G+G +G V+ G + G+++AVK + RE L
Sbjct: 34 TIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTEEASWFRETEIYQTVLMRHEN 92
Query: 97 LLGCCIDKDEK--------ILIYEYMPNKSLDFFL----FDWVTRVRIIEGIAQGLLYLH 144
+LG I D K LI +Y N SL +L D + +++ GL +LH
Sbjct: 93 ILGF-IAADIKGTGSWTQLYLITDYHENGSLYDYLKSTTLDAKSMLKLAYSSVSGLCHLH 151
Query: 145 Q-----YSRVRIIHRDLKVSNILLDKDMNPKISDFGIAR--ICRGNELQANTGRIVGTYR 197
+ I HRDLK NIL+ K+ I+D G+A I NE+ VGT R
Sbjct: 152 TEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKR 211
Query: 198 YMSPEYAIQGIFS------IKSDVFSFGVLLLKIVSGKKTTGFYRTYSF 240
YM PE + + I +D++SFG++L ++ + G Y
Sbjct: 212 YMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQL 260
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGT 195
+A+G+ +L + IHRDL NILL KI DFG+AR + + G
Sbjct: 177 VAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNARLP 233
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVS 227
++M+PE +++ +SDV+S+G+ L ++ S
Sbjct: 234 VKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 103/214 (48%), Gaps = 35/214 (16%)
Query: 42 SVSTATNKFSDANKLGEGGFGPVYKGV-LKNGDEIAVKRLSGRSGQGLRELKN---KLRL 97
++ ++ + + +G G +G V K G +AVK+LS R Q + K +LRL
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRL 74
Query: 98 LGCCIDKDEKILIYEYMPNKSLDFF-------------LFDWVTRVRI--------IEGI 136
L ++ L+ + P +SL+ F L + V ++ I I
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFLIYQI 134
Query: 137 AQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTY 196
+GL Y+H IIHRDLK SN+ +++D KI DFG +CR + + TG V T
Sbjct: 135 LRGLKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFG---LCRHTDDEM-TG-YVATR 186
Query: 197 RYMSPEYAIQGI-FSIKSDVFSFGVLLLKIVSGK 229
Y +PE + + ++ D++S G ++ ++++G+
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 118/270 (43%), Gaps = 53/270 (19%)
Query: 36 PLFSFSSVSTA----TNKFSDANKLGEGGFGPVYKGV-LKNGDEIAVKRL------SGRS 84
P + SV +K+ K+G+G FG V+K K G ++A+K++ G
Sbjct: 2 PAKQYDSVECPFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFP 61
Query: 85 GQGLRELK--------NKLRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTR------- 129
LRE+K N + L+ C K Y K+ + +FD+
Sbjct: 62 ITALREIKILQLLKHENVVNLIEICRTKASP-----YNRCKASIYLVFDFCEHDLAGLLS 116
Query: 130 -----------VRIIEGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIAR 178
R+++ + GL Y+H R +I+HRD+K +N+L+ +D K++DFG+AR
Sbjct: 117 NVLVKFTLSEIKRVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLAR 173
Query: 179 ---ICRGNELQANTGRIVGTYRYMSPEYAI-QGIFSIKSDVFSFGVLLLKIVSGKK-TTG 233
+ + ++ R+V T Y PE + + + D++ G ++ ++ + G
Sbjct: 174 AFSLAKNSQPNRYXNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQG 232
Query: 234 FYRTYSFTLLGYISENIYE--FPSVDTHNV 261
+ L+ + +I +P+VD + +
Sbjct: 233 NTEQHQLALISQLCGSITPEVWPNVDNYEL 262
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 100/217 (46%), Gaps = 51/217 (23%)
Query: 49 KFSDANKLGEGGFGPVYKGVLK-NGDEIAVKRLSGRSGQG-----LRELKNKLR------ 96
++++ + +GEG +G V N +A+K++S Q LRE+K LR
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 87
Query: 97 -------------------LLGCCIDKD-EKILIYEYMPNKSLDFFLFDWVTRVRIIEGI 136
++ ++ D K+L +++ N + +FL+ I
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ----------I 137
Query: 137 AQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTG---RIV 193
+GL Y+H ++HRDLK SN+LL+ + KI DFG+AR+ + +TG V
Sbjct: 138 LRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPD--HDHTGFLTEYV 192
Query: 194 GTYRYMSPEYAIQGIFSIKS-DVFSFGVLLLKIVSGK 229
T Y +PE + KS D++S G +L +++S +
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGT 195
+A+G+ +L + IHRDL NILL KI DFG+AR + + G
Sbjct: 177 VAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLP 233
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVS 227
++M+PE +++ +SDV+S+G+ L ++ S
Sbjct: 234 VKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGT 195
+A+G+ +L + IHRDL NILL KI DFG+AR + + G
Sbjct: 154 VAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLP 210
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVS 227
++M+PE +++ +SDV+S+G+ L ++ S
Sbjct: 211 VKWMAPESIFNCVYTFESDVWSYGIFLWELFS 242
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGT 195
+A+G+ +L + IHRDL NILL KI DFG+AR + + G
Sbjct: 170 VAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLP 226
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVS 227
++M+PE +++ +SDV+S+G+ L ++ S
Sbjct: 227 VKWMAPESIFNCVYTFESDVWSYGIFLWELFS 258
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 100/217 (46%), Gaps = 51/217 (23%)
Query: 49 KFSDANKLGEGGFGPVYKGVLK-NGDEIAVKRLSGRSGQG-----LRELKNKLR------ 96
++++ + +GEG +G V N +A+K++S Q LRE+K LR
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENI 87
Query: 97 -------------------LLGCCIDKD-EKILIYEYMPNKSLDFFLFDWVTRVRIIEGI 136
++ ++ D K+L +++ N + +FL+ I
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ----------I 137
Query: 137 AQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTG---RIV 193
+GL Y+H ++HRDLK SN+LL+ + KI DFG+AR+ + +TG V
Sbjct: 138 LRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPD--HDHTGFLTEYV 192
Query: 194 GTYRYMSPEYAIQGIFSIKS-DVFSFGVLLLKIVSGK 229
T Y +PE + KS D++S G +L +++S +
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 100/217 (46%), Gaps = 51/217 (23%)
Query: 49 KFSDANKLGEGGFGPVYKGVLK-NGDEIAVKRLSGRSGQG-----LRELKNKLR------ 96
++++ + +GEG +G V N +A+K++S Q LRE+K LR
Sbjct: 29 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 88
Query: 97 -------------------LLGCCIDKD-EKILIYEYMPNKSLDFFLFDWVTRVRIIEGI 136
++ ++ D K+L +++ N + +FL+ I
Sbjct: 89 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ----------I 138
Query: 137 AQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTG---RIV 193
+GL Y+H ++HRDLK SN+LL+ + KI DFG+AR+ + +TG V
Sbjct: 139 LRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD--HDHTGFLTEYV 193
Query: 194 GTYRYMSPEYAIQGIFSIKS-DVFSFGVLLLKIVSGK 229
T Y +PE + KS D++S G +L +++S +
Sbjct: 194 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 100/217 (46%), Gaps = 51/217 (23%)
Query: 49 KFSDANKLGEGGFGPVYKGVLK-NGDEIAVKRLSGRSGQG-----LRELKNKLR------ 96
++++ + +GEG +G V N +A+K++S Q LRE+K LR
Sbjct: 30 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 89
Query: 97 -------------------LLGCCIDKD-EKILIYEYMPNKSLDFFLFDWVTRVRIIEGI 136
++ ++ D K+L +++ N + +FL+ I
Sbjct: 90 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ----------I 139
Query: 137 AQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTG---RIV 193
+GL Y+H ++HRDLK SN+LL+ + KI DFG+AR+ + +TG V
Sbjct: 140 LRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD--HDHTGFLTEYV 194
Query: 194 GTYRYMSPEYAIQGIFSIKS-DVFSFGVLLLKIVSGK 229
T Y +PE + KS D++S G +L +++S +
Sbjct: 195 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 100/217 (46%), Gaps = 51/217 (23%)
Query: 49 KFSDANKLGEGGFGPVYKGVLK-NGDEIAVKRLSGRSGQG-----LRELKNKLR------ 96
++++ + +GEG +G V N +A+K++S Q LRE+K LR
Sbjct: 21 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 80
Query: 97 -------------------LLGCCIDKD-EKILIYEYMPNKSLDFFLFDWVTRVRIIEGI 136
++ ++ D K+L +++ N + +FL+ I
Sbjct: 81 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ----------I 130
Query: 137 AQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTG---RIV 193
+GL Y+H ++HRDLK SN+LL+ + KI DFG+AR+ + +TG V
Sbjct: 131 LRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD--HDHTGFLTEYV 185
Query: 194 GTYRYMSPEYAIQGIFSIKS-DVFSFGVLLLKIVSGK 229
T Y +PE + KS D++S G +L +++S +
Sbjct: 186 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 100/217 (46%), Gaps = 51/217 (23%)
Query: 49 KFSDANKLGEGGFGPVYKGVLK-NGDEIAVKRLSGRSGQG-----LRELKNKLR------ 96
++++ + +GEG +G V N +A+K++S Q LRE+K LR
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 87
Query: 97 -------------------LLGCCIDKD-EKILIYEYMPNKSLDFFLFDWVTRVRIIEGI 136
++ ++ D K+L +++ N + +FL+ I
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ----------I 137
Query: 137 AQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTG---RIV 193
+GL Y+H ++HRDLK SN+LL+ + KI DFG+AR+ + +TG V
Sbjct: 138 LRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD--HDHTGFLTEYV 192
Query: 194 GTYRYMSPEYAIQGIFSIKS-DVFSFGVLLLKIVSGK 229
T Y +PE + KS D++S G +L +++S +
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGT 195
+A+G+ +L + IHRDL NILL KI DFG+AR + + G
Sbjct: 172 VAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLP 228
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVS 227
++M+PE +++ +SDV+S+G+ L ++ S
Sbjct: 229 VKWMAPESIFNCVYTFESDVWSYGIFLWELFS 260
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 100/217 (46%), Gaps = 51/217 (23%)
Query: 49 KFSDANKLGEGGFGPVYKGVLK-NGDEIAVKRLSGRSGQG-----LRELKNKLR------ 96
++++ + +GEG +G V N +A+K++S Q LRE+K LR
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 87
Query: 97 -------------------LLGCCIDKD-EKILIYEYMPNKSLDFFLFDWVTRVRIIEGI 136
++ ++ D K+L +++ N + +FL+ I
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ----------I 137
Query: 137 AQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTG---RIV 193
+GL Y+H ++HRDLK SN+LL+ + KI DFG+AR+ + +TG V
Sbjct: 138 LRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD--HDHTGFLXEXV 192
Query: 194 GTYRYMSPEYAIQGIFSIKS-DVFSFGVLLLKIVSGK 229
T Y +PE + KS D++S G +L +++S +
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 100/217 (46%), Gaps = 51/217 (23%)
Query: 49 KFSDANKLGEGGFGPVYKGVLK-NGDEIAVKRLSGRSGQG-----LRELKNKLR------ 96
++++ + +GEG +G V N +A+K++S Q LRE+K LR
Sbjct: 29 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 88
Query: 97 -------------------LLGCCIDKD-EKILIYEYMPNKSLDFFLFDWVTRVRIIEGI 136
++ ++ D K+L +++ N + +FL+ I
Sbjct: 89 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ----------I 138
Query: 137 AQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTG---RIV 193
+GL Y+H ++HRDLK SN+LL+ + KI DFG+AR+ + +TG V
Sbjct: 139 LRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD--HDHTGFLXEXV 193
Query: 194 GTYRYMSPEYAIQGIFSIKS-DVFSFGVLLLKIVSGK 229
T Y +PE + KS D++S G +L +++S +
Sbjct: 194 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 104/217 (47%), Gaps = 41/217 (18%)
Query: 42 SVSTATNKFSDANKLGEGGFGPVYKGV-LKNGDEIAVKRLSGRSGQGLRELKN---KLRL 97
++ ++ + + +G G +G V K G +AVK+LS R Q + K +LRL
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRL 74
Query: 98 LGCCIDKDEKILIYEYMPNKSL----DFFLFDWVTRVR--------------------II 133
L ++ L+ + P +SL D +L VT + +I
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYL---VTHLMGADLNNIVKCQKLTDDHVQFLI 131
Query: 134 EGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIV 193
I +GL Y+H IIHRDLK SN+ +++D KI D+G+AR +E+ TG V
Sbjct: 132 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDYGLARHT-DDEM---TG-YV 183
Query: 194 GTYRYMSPEYAIQGI-FSIKSDVFSFGVLLLKIVSGK 229
T Y +PE + + ++ D++S G ++ ++++G+
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 100/217 (46%), Gaps = 51/217 (23%)
Query: 49 KFSDANKLGEGGFGPVYKGVLK-NGDEIAVKRLSGRSGQG-----LRELKNKLR------ 96
++++ + +GEG +G V N +A+K++S Q LRE+K LR
Sbjct: 22 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 81
Query: 97 -------------------LLGCCIDKD-EKILIYEYMPNKSLDFFLFDWVTRVRIIEGI 136
++ ++ D K+L +++ N + +FL+ I
Sbjct: 82 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ----------I 131
Query: 137 AQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTG---RIV 193
+GL Y+H ++HRDLK SN+LL+ + KI DFG+AR+ + +TG V
Sbjct: 132 LRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD--HDHTGFLTEYV 186
Query: 194 GTYRYMSPEYAIQGIFSIKS-DVFSFGVLLLKIVSGK 229
T Y +PE + KS D++S G +L +++S +
Sbjct: 187 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 63/124 (50%), Gaps = 10/124 (8%)
Query: 139 GLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRY 198
L YLH II+RDLK NILLDK+ + KI+DFG A+ + T + GT Y
Sbjct: 118 ALEYLHSKD---IIYRDLKPENILLDKNGHIKITDFGFAKY-----VPDVTYXLCGTPDY 169
Query: 199 MSPEYAIQGIFSIKSDVFSFGVLLLKIVSGKKTTGFYRTYSFTLLGYISENIYEFPSVDT 258
++PE ++ D +SFG+L+ ++++G T FY + + I FP
Sbjct: 170 IAPEVVSTKPYNKSIDWWSFGILIYEMLAG--YTPFYDSNTMKTYEKILNAELRFPPFFN 227
Query: 259 HNVK 262
+VK
Sbjct: 228 EDVK 231
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 100/217 (46%), Gaps = 51/217 (23%)
Query: 49 KFSDANKLGEGGFGPVYKGVLK-NGDEIAVKRLSGRSGQG-----LRELKNKLR------ 96
++++ + +GEG +G V N +A+K++S Q LRE+K LR
Sbjct: 22 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 81
Query: 97 -------------------LLGCCIDKD-EKILIYEYMPNKSLDFFLFDWVTRVRIIEGI 136
++ ++ D K+L +++ N + +FL+ I
Sbjct: 82 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ----------I 131
Query: 137 AQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTG---RIV 193
+GL Y+H ++HRDLK SN+LL+ + KI DFG+AR+ + +TG V
Sbjct: 132 LRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD--HDHTGFLTEYV 186
Query: 194 GTYRYMSPEYAIQGIFSIKS-DVFSFGVLLLKIVSGK 229
T Y +PE + KS D++S G +L +++S +
Sbjct: 187 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 100/208 (48%), Gaps = 32/208 (15%)
Query: 46 ATNKFSDANK---LGEGGFGPVYK-GVLKNGDEIAVKRLSGRSGQGLRELKNKL------ 95
A N F +K LG G FG V+K G ++A K + R + E+KN++
Sbjct: 84 AVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQL 143
Query: 96 ------RLLGCCIDKDEKILIYEYMPNKSL------DFFLFDWVTRVRIIEGIAQGLLYL 143
+L K++ +L+ EY+ L + + + + ++ I +G+ ++
Sbjct: 144 DHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHM 203
Query: 144 HQYSRVRIIHRDLKVSNIL-LDKDMNP-KISDFGIARICRGNE-LQANTGRIVGTYRYMS 200
HQ + I+H DLK NIL +++D KI DFG+AR + E L+ N GT +++
Sbjct: 204 HQ---MYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVN----FGTPEFLA 256
Query: 201 PEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
PE S +D++S GV+ ++SG
Sbjct: 257 PEVVNYDFVSFPTDMWSVGVIAYMLLSG 284
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 100/217 (46%), Gaps = 51/217 (23%)
Query: 49 KFSDANKLGEGGFGPVYKGVLK-NGDEIAVKRLSGRSGQG-----LRELKNKLR------ 96
++++ + +GEG +G V N +A+K++S Q LRE+K LR
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 87
Query: 97 -------------------LLGCCIDKD-EKILIYEYMPNKSLDFFLFDWVTRVRIIEGI 136
++ ++ D K+L +++ N + +FL+ I
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQ----------I 137
Query: 137 AQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTG---RIV 193
+GL Y+H ++HRDLK SN+LL+ + KI DFG+AR+ + +TG V
Sbjct: 138 LRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD--HDHTGFLTEYV 192
Query: 194 GTYRYMSPEYAIQGIFSIKS-DVFSFGVLLLKIVSGK 229
T Y +PE + KS D++S G +L +++S +
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 54/95 (56%), Gaps = 7/95 (7%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQA-NTGRIVG 194
IA GL +L II+RDLK+ N++LD + + KI+DFG +C+ N T G
Sbjct: 451 IAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFG---MCKENIWDGVTTKXFCG 504
Query: 195 TYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGK 229
T Y++PE + D ++FGVLL ++++G+
Sbjct: 505 TPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 539
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 113/254 (44%), Gaps = 49/254 (19%)
Query: 48 NKFSDANKLGEGGFGPVYKGV-LKNGDEIAVKRL------SGRSGQGLRELK-------- 92
+K+ K+G+G FG V+K K G ++A+K++ G LRE+K
Sbjct: 18 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHE 77
Query: 93 NKLRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTR------------------VRIIE 134
N + L+ C K Y K + +FD+ R+++
Sbjct: 78 NVVNLIEICRTKASP-----YNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQ 132
Query: 135 GIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIAR---ICRGNELQANTGR 191
+ GL Y+H R +I+HRD+K +N+L+ +D K++DFG+AR + + ++ R
Sbjct: 133 MLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNR 189
Query: 192 IVGTYRYMSPEYAI-QGIFSIKSDVFSFGVLLLKIVSGKK-TTGFYRTYSFTLLGYISEN 249
+V T Y PE + + + D++ G ++ ++ + G + L+ + +
Sbjct: 190 VV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGS 248
Query: 250 IYE--FPSVDTHNV 261
I +P+VD + +
Sbjct: 249 ITPEVWPNVDNYEL 262
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 67/127 (52%), Gaps = 19/127 (14%)
Query: 107 KILIYEYMPNKSLDFFLFDWVTRVRIIEGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKD 166
K+L +++ N + +FL+ I +GL Y+H ++HRDLK SN+LL+
Sbjct: 118 KLLKTQHLSNDHICYFLYQ----------ILRGLKYIHS---ANVLHRDLKPSNLLLNTT 164
Query: 167 MNPKISDFGIARICRGNELQANTG---RIVGTYRYMSPEYAIQGIFSIKS-DVFSFGVLL 222
+ KI DFG+AR+ + +TG V T Y +PE + KS D++S G +L
Sbjct: 165 CDLKICDFGLARVADPD--HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL 222
Query: 223 LKIVSGK 229
+++S +
Sbjct: 223 AEMLSNR 229
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 88/202 (43%), Gaps = 28/202 (13%)
Query: 48 NKFSDANKLGEGGFGPVYKGVLKNGDEI-AVKRL-------SGRSGQGLRELK------- 92
+ F LG+G FG VY K I A+K L G Q RE++
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHH 82
Query: 93 -NKLRLLGCCIDKDEKILIYEYMPNKSLDFFL-----FDWVTRVRIIEGIAQGLLYLHQY 146
N LRL D+ LI EY P L L FD I+E +A L+Y H
Sbjct: 83 PNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCHGK 142
Query: 147 SRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQ 206
++IHRD+K N+LL KI+DFG + L+ T + GT Y+ PE
Sbjct: 143 ---KVIHRDIKPENLLLGLKGELKIADFGWS--VHAPSLRRKT--MCGTLDYLPPEMIEG 195
Query: 207 GIFSIKSDVFSFGVLLLKIVSG 228
+ + K D++ GVL +++ G
Sbjct: 196 RMHNEKVDLWCIGVLCYELLVG 217
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 55/95 (57%), Gaps = 7/95 (7%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGR-IVG 194
IA GL +L II+RDLK+ N++LD + + KI+DFG +C+ N T + G
Sbjct: 130 IAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFG---MCKENIWDGVTTKXFCG 183
Query: 195 TYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGK 229
T Y++PE + D ++FGVLL ++++G+
Sbjct: 184 TPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 218
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 67/127 (52%), Gaps = 19/127 (14%)
Query: 107 KILIYEYMPNKSLDFFLFDWVTRVRIIEGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKD 166
K+L +++ N + +FL+ I +GL Y+H ++HRDLK SN+LL+
Sbjct: 116 KLLKTQHLSNDHICYFLYQ----------ILRGLKYIHS---ANVLHRDLKPSNLLLNTT 162
Query: 167 MNPKISDFGIARICRGNELQANTG---RIVGTYRYMSPEYAIQGIFSIKS-DVFSFGVLL 222
+ KI DFG+AR+ + +TG V T Y +PE + KS D++S G +L
Sbjct: 163 CDLKICDFGLARVADPD--HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL 220
Query: 223 LKIVSGK 229
+++S +
Sbjct: 221 AEMLSNR 227
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 104/225 (46%), Gaps = 33/225 (14%)
Query: 27 SKKKEVDQLPLFSFSSVSTAT-NKFSDANKLGEGGFGPVY-KGVLKNGDEIAVKRLSGRS 84
+K KE D L + + +TA ++F +G G FG V ++ G+ A+K L +
Sbjct: 20 AKAKE-DFLKKWENPAQNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQK 78
Query: 85 GQGLRELK---NKLRLLGCC------------IDKDEKILIYEYMPNKSLDFFLFDWVTR 129
L++++ N+ R+L D ++ EYMP + F + R
Sbjct: 79 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDM----FSHLRR 134
Query: 130 V-RIIEG-----IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGN 183
+ R E AQ +L + +I+RDLK N+L+D+ K++DFG A+ +G
Sbjct: 135 IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG- 193
Query: 184 ELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
T + GT Y++PE + ++ D ++ GVL+ ++ +G
Sbjct: 194 ----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 67/127 (52%), Gaps = 19/127 (14%)
Query: 107 KILIYEYMPNKSLDFFLFDWVTRVRIIEGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKD 166
K+L +++ N + +FL+ I +GL Y+H ++HRDLK SN+LL+
Sbjct: 116 KLLKTQHLSNDHICYFLYQ----------ILRGLKYIHS---ANVLHRDLKPSNLLLNTT 162
Query: 167 MNPKISDFGIARICRGNELQANTG---RIVGTYRYMSPEYAIQGIFSIKS-DVFSFGVLL 222
+ KI DFG+AR+ + +TG V T Y +PE + KS D++S G +L
Sbjct: 163 SDLKICDFGLARVADPD--HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL 220
Query: 223 LKIVSGK 229
+++S +
Sbjct: 221 AEMLSNR 227
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 104/225 (46%), Gaps = 33/225 (14%)
Query: 27 SKKKEVDQLPLFSFSSVSTAT-NKFSDANKLGEGGFGPVY-KGVLKNGDEIAVKRLSGRS 84
+K KE D L + + +TA ++F LG G FG V ++ G+ A+K L +
Sbjct: 20 AKAKE-DFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQK 78
Query: 85 GQGLRELK---NKLRLLGCC------------IDKDEKILIYEYMPNKSLDFFLFDWVTR 129
L+E++ N+ R+L D ++ EY P + F + R
Sbjct: 79 VVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRR 134
Query: 130 V-RIIEG-----IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGN 183
+ R E AQ +L + +I+RDLK N+++D+ K++DFG+A+ +G
Sbjct: 135 IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKG- 193
Query: 184 ELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
T + GT Y++PE + ++ D ++ GVL+ ++ +G
Sbjct: 194 ----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 104/225 (46%), Gaps = 33/225 (14%)
Query: 27 SKKKEVDQLPLFSFSSVSTAT-NKFSDANKLGEGGFGPVY-KGVLKNGDEIAVKRLSGRS 84
+K KE D L + + +TA ++F +G G FG V ++ G+ A+K L +
Sbjct: 20 AKAKE-DFLKKWENPAQNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQK 78
Query: 85 GQGLRELK---NKLRLLGCC------------IDKDEKILIYEYMPNKSLDFFLFDWVTR 129
L++++ N+ R+L D ++ EYMP + F + R
Sbjct: 79 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDM----FSHLRR 134
Query: 130 V-RIIEG-----IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGN 183
+ R E AQ +L + +I+RDLK N+L+D+ K++DFG A+ +G
Sbjct: 135 IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG- 193
Query: 184 ELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
T + GT Y++PE + ++ D ++ GVL+ ++ +G
Sbjct: 194 ----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 104/217 (47%), Gaps = 41/217 (18%)
Query: 42 SVSTATNKFSDANKLGEGGFGPVYKGV-LKNGDEIAVKRLSGRSGQGLRELKN---KLRL 97
++ ++ + + +G G +G V K G +AVK+LS + Q + K +LRL
Sbjct: 28 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-KPFQSIIHAKRTYRELRL 86
Query: 98 LGCCIDKDEKILIYEYMPNKSL----DFFLFDWVTRVR--------------------II 133
L ++ L+ + P +SL D +L VT + +I
Sbjct: 87 LKHMKHENVIGLLDVFTPARSLEEFNDVYL---VTHLMGADLNNIVKCQKLTDDHVQFLI 143
Query: 134 EGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIV 193
I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR +E+ TG V
Sbjct: 144 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHT-DDEM---TG-YV 195
Query: 194 GTYRYMSPEYAIQGI-FSIKSDVFSFGVLLLKIVSGK 229
T Y +PE + + ++ D++S G ++ ++++G+
Sbjct: 196 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 93/213 (43%), Gaps = 35/213 (16%)
Query: 42 SVSTATNKFSDANKLGEGGFGPV---YKGVLKNGDEIAVKRLSGRSGQGLRELKNKLR-- 96
S T ++ +G G G V + VL G +AVK+LS R Q K R
Sbjct: 18 STFTVLKRYQQLKPIGSGAQGIVCAAFDTVL--GINVAVKKLS-RPFQNQTHAKRAYREL 74
Query: 97 -LLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTRVRIIEGIAQ----------------- 138
LL C K+ L+ + P K+L+ F ++ + + Q
Sbjct: 75 VLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQ 134
Query: 139 ---GLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGT 195
G+ +LH IIHRDLK SNI++ D KI DFG+AR N + T +V
Sbjct: 135 MLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMM--TPYVVTR 189
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
Y Y +PE + ++ D++S G ++ ++V G
Sbjct: 190 Y-YRAPEVILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 113/255 (44%), Gaps = 49/255 (19%)
Query: 47 TNKFSDANKLGEGGFGPVYKGV-LKNGDEIAVKRL------SGRSGQGLRELK------- 92
+K+ K+G+G FG V+K K G ++A+K++ G LRE+K
Sbjct: 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 75
Query: 93 -NKLRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTR------------------VRII 133
N + L+ C K Y K + +FD+ R++
Sbjct: 76 ENVVNLIEICRTKASP-----YNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVM 130
Query: 134 EGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIAR---ICRGNELQANTG 190
+ + GL Y+H R +I+HRD+K +N+L+ +D K++DFG+AR + + ++
Sbjct: 131 QMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXN 187
Query: 191 RIVGTYRYMSPEYAI-QGIFSIKSDVFSFGVLLLKIVSGKK-TTGFYRTYSFTLLGYISE 248
R+V T Y PE + + + D++ G ++ ++ + G + L+ +
Sbjct: 188 RVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCG 246
Query: 249 NIYE--FPSVDTHNV 261
+I +P+VD + +
Sbjct: 247 SITPEVWPNVDNYEL 261
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 100/214 (46%), Gaps = 36/214 (16%)
Query: 44 STATNKFSDANKLGEGGFGPVYKGVLK-NGDEIAVK-----RLSG-----------RSGQ 86
S + + +LG G F V K K G E A K RLS R
Sbjct: 1 SMVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVN 60
Query: 87 GLRELK--NKLRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVT-----RVRIIEGIAQG 139
LRE++ N + L +K + +LI E + L FL + + + ++ I G
Sbjct: 61 ILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDG 120
Query: 140 LLYLHQYSRVRIIHRDLKVSNI-LLDKDM-NPKIS--DFGIA-RICRGNELQANTGRIVG 194
+ YLH RI H DLK NI LLDK++ NP+I DFGIA +I GNE + I G
Sbjct: 121 VHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFK----NIFG 173
Query: 195 TYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
T +++PE +++D++S GV+ ++SG
Sbjct: 174 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 207
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 4/94 (4%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGT 195
I L YLH S +++RDLK+ N++LDKD + KI+DFG+ + G + A GT
Sbjct: 118 IVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGT 173
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGK 229
Y++PE + D + GV++ +++ G+
Sbjct: 174 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 4/94 (4%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGT 195
I L YLH S +++RDLK+ N++LDKD + KI+DFG+ + G + A GT
Sbjct: 119 IVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGT 174
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGK 229
Y++PE + D + GV++ +++ G+
Sbjct: 175 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 208
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 117/270 (43%), Gaps = 53/270 (19%)
Query: 36 PLFSFSSVSTA----TNKFSDANKLGEGGFGPVYKGV-LKNGDEIAVKRL------SGRS 84
P + SV +K+ K+G+G FG V+K K G ++A+K++ G
Sbjct: 2 PAKQYDSVECPFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFP 61
Query: 85 GQGLRELK--------NKLRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTR------- 129
LRE+K N + L+ C K Y K + +FD+
Sbjct: 62 ITALREIKILQLLKHENVVNLIEICRTKASP-----YNRCKGSIYLVFDFCEHDLAGLLS 116
Query: 130 -----------VRIIEGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIAR 178
R+++ + GL Y+H R +I+HRD+K +N+L+ +D K++DFG+AR
Sbjct: 117 NVLVKFTLSEIKRVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLAR 173
Query: 179 ---ICRGNELQANTGRIVGTYRYMSPEYAI-QGIFSIKSDVFSFGVLLLKIVSGKK-TTG 233
+ + ++ R+V T Y PE + + + D++ G ++ ++ + G
Sbjct: 174 AFSLAKNSQPNRYXNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQG 232
Query: 234 FYRTYSFTLLGYISENIYE--FPSVDTHNV 261
+ L+ + +I +P+VD + +
Sbjct: 233 NTEQHQLALISQLCGSITPEVWPNVDNYEL 262
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 101/214 (47%), Gaps = 36/214 (16%)
Query: 44 STATNKFSDANKLGEGGFGPVYKGVLK-NGDEIAVKRLSGR----SGQG----------- 87
S + + +LG G F V K K G E A K + R S +G
Sbjct: 22 SMVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVN 81
Query: 88 -LRELK--NKLRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVT-----RVRIIEGIAQG 139
LRE++ N + L +K + +LI E + L FL + + + ++ I G
Sbjct: 82 ILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDG 141
Query: 140 LLYLHQYSRVRIIHRDLKVSNI-LLDKDM-NPKIS--DFGIA-RICRGNELQANTGRIVG 194
+ YLH RI H DLK NI LLDK++ NP+I DFGIA +I GNE + I G
Sbjct: 142 VHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFK----NIFG 194
Query: 195 TYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
T +++PE +++D++S GV+ ++SG
Sbjct: 195 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 228
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 4/94 (4%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGT 195
I L YLH S +++RDLK+ N++LDKD + KI+DFG+ + G + A GT
Sbjct: 117 IVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGT 172
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGK 229
Y++PE + D + GV++ +++ G+
Sbjct: 173 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 206
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 4/94 (4%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGT 195
I L YLH S +++RDLK+ N++LDKD + KI+DFG+ + G + A GT
Sbjct: 260 IVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKTFCGT 315
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGK 229
Y++PE + D + GV++ +++ G+
Sbjct: 316 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 349
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 103/217 (47%), Gaps = 41/217 (18%)
Query: 42 SVSTATNKFSDANKLGEGGFGPVYKGV-LKNGDEIAVKRLSGRSGQGLRELKN---KLRL 97
++ ++ + + +G G +G V K G +AVK+LS R Q + K +LRL
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRELRL 74
Query: 98 LGCCIDKDEKILIYEYMPNKSL----DFFLFDWVTRVR--------------------II 133
L ++ L+ + P +SL D +L VT + +I
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYL---VTHLMGADLNNIVKCQKLTDDHVQFLI 131
Query: 134 EGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIV 193
I +GL Y+H IIHRDLK SN+ +++D KI DF +AR +E+ TG V
Sbjct: 132 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFYLARHT-DDEM---TG-YV 183
Query: 194 GTYRYMSPEYAIQGI-FSIKSDVFSFGVLLLKIVSGK 229
T Y +PE + + ++ D++S G ++ ++++G+
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 4/94 (4%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGT 195
I L YLH S +++RDLK+ N++LDKD + KI+DFG+ + G + A GT
Sbjct: 257 IVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKTFCGT 312
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGK 229
Y++PE + D + GV++ +++ G+
Sbjct: 313 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 346
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 95/197 (48%), Gaps = 36/197 (18%)
Query: 53 ANKLGEGGFGPVYKGVLKN-GDEIAVKRLSGRS-GQGLR-ELKNK---LRLLGCCI---- 102
+ +LG G F V + + K+ G E A K L R GQ R E+ ++ L L C
Sbjct: 34 SKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVIN 93
Query: 103 ------DKDEKILIYEYMPNKSLDFF----LFDWVTR---VRIIEGIAQGLLYLHQYSRV 149
+ E ILI EY + L + V+ +R+I+ I +G+ YLHQ +
Sbjct: 94 LHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNN-- 151
Query: 150 RIIHRDLKVSNILLDKDMNP----KISDFGIAR-ICRGNELQANTGRIVGTYRYMSPEYA 204
I+H DLK NILL + P KI DFG++R I EL+ I+GT Y++PE
Sbjct: 152 -IVHLDLKPQNILL-SSIYPLGDIKIVDFGMSRKIGHACELR----EIMGTPEYLAPEIL 205
Query: 205 IQGIFSIKSDVFSFGVL 221
+ +D+++ G++
Sbjct: 206 NYDPITTATDMWNIGII 222
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 92/213 (43%), Gaps = 35/213 (16%)
Query: 42 SVSTATNKFSDANKLGEGGFGPV---YKGVLKNGDEIAVKRLSGRSGQGLRELKNKLR-- 96
S T ++ +G G G V + VL G +AVK+LS R Q K R
Sbjct: 16 STFTVLKRYQQLKPIGSGAQGIVCAAFDTVL--GINVAVKKLS-RPFQNQTHAKRAYREL 72
Query: 97 -LLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTRVRIIEGIAQ----------------- 138
LL C K+ L+ + P K+L+ F ++ + + Q
Sbjct: 73 VLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQ 132
Query: 139 ---GLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGT 195
G+ +LH IIHRDLK SNI++ D KI DFG+AR N + T +V
Sbjct: 133 MLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFMM--TPYVVTR 187
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
Y Y +PE + + D++S G ++ ++V G
Sbjct: 188 Y-YRAPEVILGMGYKENVDIWSVGCIMGELVKG 219
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 94/201 (46%), Gaps = 39/201 (19%)
Query: 56 LGEGGFGPV-----YKGVLKNGDEIAVKRLSGRSGQGLR-----------ELKNKLRLLG 99
LGEG FG V YK K + ++L +S +R + ++L
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYD 76
Query: 100 CCIDKDEKILIYEYMPNKSLDFFLFDWVTRV---------RIIEGIAQGLLYLHQYSRVR 150
+ +++ EY + LFD++ R + I + Y H++ +
Sbjct: 77 VITTPTDIVMVIEYAGGE-----LFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRH---K 128
Query: 151 IIHRDLKVSNILLDKDMNPKISDFGIARI-CRGNELQANTGRIVGTYRYMSPEYAIQGIF 209
I+HRDLK N+LLD ++N KI+DFG++ I GN L+ + G+ Y +PE ++
Sbjct: 129 IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSC----GSPNYAAPEVINGKLY 184
Query: 210 S-IKSDVFSFGVLLLKIVSGK 229
+ + DV+S G++L ++ G+
Sbjct: 185 AGPEVDVWSCGIVLYVMLVGR 205
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 49/84 (58%), Gaps = 3/84 (3%)
Query: 144 HQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEY 203
H +SR R++HRD+K +N+ + K+ D G+ R A++ +VGT YMSPE
Sbjct: 151 HMHSR-RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHS--LVGTPYYMSPER 207
Query: 204 AIQGIFSIKSDVFSFGVLLLKIVS 227
+ ++ KSD++S G LL ++ +
Sbjct: 208 IHENGYNFKSDIWSLGCLLYEMAA 231
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 99/210 (47%), Gaps = 36/210 (17%)
Query: 48 NKFSDANKLGEGGFGPVYKGVLK-NGDEIAVK-----RLSG-----------RSGQGLRE 90
+ + +LG G F V K K G E A K RLS R LRE
Sbjct: 12 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 71
Query: 91 LK--NKLRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVT-----RVRIIEGIAQGLLYL 143
++ N + L +K + +LI E + L FL + + + ++ I G+ YL
Sbjct: 72 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYL 131
Query: 144 HQYSRVRIIHRDLKVSNI-LLDKDM-NPKIS--DFGIA-RICRGNELQANTGRIVGTYRY 198
H RI H DLK NI LLDK++ NP+I DFGIA +I GNE + I GT +
Sbjct: 132 HSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFK----NIFGTPEF 184
Query: 199 MSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
++PE +++D++S GV+ ++SG
Sbjct: 185 VAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 66/127 (51%), Gaps = 19/127 (14%)
Query: 107 KILIYEYMPNKSLDFFLFDWVTRVRIIEGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKD 166
K+L + + N + +FL+ I +GL Y+H ++HRDLK SN+L++
Sbjct: 134 KLLKSQQLSNDHICYFLYQ----------ILRGLKYIHS---ANVLHRDLKPSNLLINTT 180
Query: 167 MNPKISDFGIARICRGNELQANTG---RIVGTYRYMSPEYAIQGIFSIKS-DVFSFGVLL 222
+ KI DFG+ARI + +TG V T Y +PE + KS D++S G +L
Sbjct: 181 CDLKICDFGLARI--ADPEHDHTGFLTEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL 238
Query: 223 LKIVSGK 229
+++S +
Sbjct: 239 AEMLSNR 245
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 93/203 (45%), Gaps = 31/203 (15%)
Query: 48 NKFSDANKLGEGGFGPVY-KGVLKNGDEIAVKRLSGRSGQGLRELK---NKLRLLGCC-- 101
++F LG G FG V ++ G+ A+K L + L+E++ N+ R+L
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 102 ----------IDKDEKILIYEYMPNKSLDFFLFDWVTRV-RIIEG-----IAQGLLYLHQ 145
D ++ EY P + F + R+ R E AQ +L
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 146 YSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAI 205
+ +I+RDLK N+++D+ +++DFG+A+ +G T + GT Y++PE +
Sbjct: 157 LHSLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKG-----RTWXLCGTPEYLAPEIIL 211
Query: 206 QGIFSIKSDVFSFGVLLLKIVSG 228
++ D ++ GVL+ ++ +G
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 94/202 (46%), Gaps = 26/202 (12%)
Query: 48 NKFSDANKLGEGGFGPVYK-------------GVLKNGDEIAVKRLSGRSGQGLRELK-- 92
K+ K+GEG +G V+K L++ D+ +K+++ R + L++LK
Sbjct: 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHP 62
Query: 93 NKLRLLGCCIDKDEKILIYEYMPNKSL-DFFLFDWVTRVRIIEGIA----QGLLYLHQYS 147
N + LL K L++EY + L + + +++ I Q + + H+++
Sbjct: 63 NLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHN 122
Query: 148 RVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQG 207
IHRD+K NIL+ K K+ DFG AR+ G + V T Y SPE +
Sbjct: 123 ---CIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDE--VATRWYRSPELLVGD 177
Query: 208 I-FSIKSDVFSFGVLLLKIVSG 228
+ DV++ G + +++SG
Sbjct: 178 TQYGPPVDVWAIGCVFAELLSG 199
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 93/213 (43%), Gaps = 35/213 (16%)
Query: 42 SVSTATNKFSDANKLGEGGFGPV---YKGVLKNGDEIAVKRLSGRSGQGLRELKNKLR-- 96
S T ++ + +G G G V Y +L+ +A+K+LS R Q K R
Sbjct: 18 STFTVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLS-RPFQNQTHAKRAYREL 74
Query: 97 -LLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTRVRIIEGIAQ----------------- 138
L+ C K+ L+ + P KSL+ F ++ + + Q
Sbjct: 75 VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQ 134
Query: 139 ---GLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGT 195
G+ +LH IIHRDLK SNI++ D KI DFG+AR + + T +V
Sbjct: 135 MLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM--TPEVVTR 189
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
Y Y +PE + + D++S G ++ +++ G
Sbjct: 190 Y-YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 104/225 (46%), Gaps = 33/225 (14%)
Query: 27 SKKKEVDQLPLFSFSSVSTAT-NKFSDANKLGEGGFGPVY-KGVLKNGDEIAVKRLSGRS 84
+K KE D L + + +TA ++F LG G FG V ++ G+ A+K L +
Sbjct: 20 AKAKE-DFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQK 78
Query: 85 GQGLRELK---NKLRLLGCC------------IDKDEKILIYEYMPNKSLDFFLFDWVTR 129
L++++ N+ R+L D ++ EY+P + F + R
Sbjct: 79 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRR 134
Query: 130 V-RIIEG-----IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGN 183
+ R E AQ +L + +I+RDLK N+L+D+ +++DFG A+ +G
Sbjct: 135 IGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG- 193
Query: 184 ELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
T + GT Y++PE + ++ D ++ GVL+ ++ +G
Sbjct: 194 ----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 104/225 (46%), Gaps = 33/225 (14%)
Query: 27 SKKKEVDQLPLFSFSSVSTAT-NKFSDANKLGEGGFGPVY-KGVLKNGDEIAVKRLSGRS 84
+K KE D L + + +TA ++F LG G FG V ++ G+ A+K L +
Sbjct: 20 AKAKE-DFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQK 78
Query: 85 GQGLRELK---NKLRLLGCC------------IDKDEKILIYEYMPNKSLDFFLFDWVTR 129
L++++ N+ R+L D ++ EY+P + F + R
Sbjct: 79 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRR 134
Query: 130 V-RIIEG-----IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGN 183
+ R E AQ +L + +I+RDLK N+L+D+ +++DFG A+ +G
Sbjct: 135 IGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG- 193
Query: 184 ELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
T + GT Y++PE + ++ D ++ GVL+ ++ +G
Sbjct: 194 ----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 103/225 (45%), Gaps = 33/225 (14%)
Query: 27 SKKKEVDQLPLFSFSSVSTAT-NKFSDANKLGEGGFGPVY-KGVLKNGDEIAVKRLSGRS 84
+K KE D L + + +TA ++F LG G FG V ++ G+ A+K L +
Sbjct: 21 AKAKE-DFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQK 79
Query: 85 GQGLRELK---NKLRLLGCC------------IDKDEKILIYEYMPNKSLDFFLFDWVTR 129
L++++ N+ R+L D ++ EY P + F + R
Sbjct: 80 VVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRR 135
Query: 130 V-RIIEG-----IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGN 183
+ R E AQ +L + +I+RDLK N+++D+ K++DFG A+ +G
Sbjct: 136 IGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG- 194
Query: 184 ELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
T + GT Y++PE + ++ D ++ GVL+ ++ +G
Sbjct: 195 ----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 103/217 (47%), Gaps = 41/217 (18%)
Query: 42 SVSTATNKFSDANKLGEGGFGPVYKGV-LKNGDEIAVKRLSGRSGQGLRELKN---KLRL 97
++ ++ + + +G G +G V K G +AVK+LS R Q + K +LRL
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRL 74
Query: 98 LGCCIDKDEKILIYEYMPNKSL----DFFLFDWVTRVR--------------------II 133
L ++ L+ + P +SL D +L VT + +I
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYL---VTHLMGADLNNIVKCQKLTDDHVQFLI 131
Query: 134 EGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIV 193
I +GL Y+H IIHRDLK SN+ +++D KI FG+AR +E+ TG V
Sbjct: 132 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILGFGLARHT-DDEM---TG-YV 183
Query: 194 GTYRYMSPEYAIQGI-FSIKSDVFSFGVLLLKIVSGK 229
T Y +PE + + ++ D++S G ++ ++++G+
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 103/225 (45%), Gaps = 33/225 (14%)
Query: 27 SKKKEVDQLPLFSFSSVSTAT-NKFSDANKLGEGGFGPVY-KGVLKNGDEIAVKRLSGRS 84
+K KE D L + + +TA ++F LG G FG V ++ G+ A+K L +
Sbjct: 20 AKAKE-DFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQK 78
Query: 85 GQGLRELK---NKLRLLGCC------------IDKDEKILIYEYMPNKSLDFFLFDWVTR 129
L++++ N+ R+L D ++ EY P + F + R
Sbjct: 79 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRR 134
Query: 130 V-RIIEG-----IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGN 183
+ R E AQ +L + +I+RDLK N+++D+ K++DFG A+ +G
Sbjct: 135 IGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG- 193
Query: 184 ELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
T + GT Y++PE + ++ D ++ GVL+ ++ +G
Sbjct: 194 ----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 103/217 (47%), Gaps = 41/217 (18%)
Query: 42 SVSTATNKFSDANKLGEGGFGPVYKGV-LKNGDEIAVKRLSGRSGQGLRELKN---KLRL 97
++ ++ + + +G G +G V K G +AVK+LS R Q + K +LRL
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRL 74
Query: 98 LGCCIDKDEKILIYEYMPNKSL----DFFLFDWVTRVR--------------------II 133
L ++ L+ + P +SL D +L VT + +I
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYL---VTHLMGADLNNIVKCQKLTDDHVQFLI 131
Query: 134 EGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIV 193
I +GL Y+H IIHRDLK SN+ +++D KI D G+AR +E+ TG V
Sbjct: 132 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDAGLARHT-DDEM---TG-YV 183
Query: 194 GTYRYMSPEYAIQGI-FSIKSDVFSFGVLLLKIVSGK 229
T Y +PE + + ++ D++S G ++ ++++G+
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 104/225 (46%), Gaps = 33/225 (14%)
Query: 27 SKKKEVDQLPLFSFSSVSTAT-NKFSDANKLGEGGFGPVY-KGVLKNGDEIAVKRLSGRS 84
+K KE D L + + +TA ++F LG G FG V ++ G+ A+K L +
Sbjct: 21 AKAKE-DFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQK 79
Query: 85 GQGLRELK---NKLRLLGCC------------IDKDEKILIYEYMPNKSLDFFLFDWVTR 129
L++++ N+ R+L D ++ EY+P + F + R
Sbjct: 80 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRR 135
Query: 130 V-RIIEG-----IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGN 183
+ R E AQ +L + +I+RDLK N+L+D+ +++DFG A+ +G
Sbjct: 136 IGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG- 194
Query: 184 ELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
T + GT Y++PE + ++ D ++ GVL+ ++ +G
Sbjct: 195 ----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 93/197 (47%), Gaps = 27/197 (13%)
Query: 54 NKLGEGGFGPVYKGVLKNGD------EIAVKRLSGRSGQGLRELK--------NKLRLLG 99
+KLGEG + VYKG K D EI ++ G +RE+ N + L
Sbjct: 8 DKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHD 67
Query: 100 CCIDKDEKILIYEYMPNKSLDFFLFDWVTRVRI------IEGIAQGLLYLHQYSRVRIIH 153
+ L++EY+ +K L +L D + + + + +GL Y H R +++H
Sbjct: 68 IIHTEKSLTLVFEYL-DKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCH---RQKVLH 123
Query: 154 RDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGI-FSIK 212
RDLK N+L+++ K++DFG+AR + + +V T Y P+ + +S +
Sbjct: 124 RDLKPQNLLINERGELKLADFGLAR-AKSIPTKTYDNEVV-TLWYRPPDILLGSTDYSTQ 181
Query: 213 SDVFSFGVLLLKIVSGK 229
D++ G + ++ +G+
Sbjct: 182 IDMWGVGCIFYEMATGR 198
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 104/225 (46%), Gaps = 33/225 (14%)
Query: 27 SKKKEVDQLPLFSFSSVSTAT-NKFSDANKLGEGGFGPVY-KGVLKNGDEIAVKRLSGRS 84
+K KE D L + + +TA ++F +G G FG V ++ G+ A+K L +
Sbjct: 20 AKAKE-DFLKKWENPAQNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQK 78
Query: 85 GQGLRELK---NKLRLLGCC------------IDKDEKILIYEYMPNKSLDFFLFDWVTR 129
L++++ N+ R+L D ++ EY+P + F + R
Sbjct: 79 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRR 134
Query: 130 V-RIIEG-----IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGN 183
+ R E AQ +L + +I+RDLK N+L+D+ K++DFG A+ +G
Sbjct: 135 IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG- 193
Query: 184 ELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
T + GT Y++PE + ++ D ++ GVL+ ++ +G
Sbjct: 194 ----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 102/208 (49%), Gaps = 39/208 (18%)
Query: 50 FSDANKLGEGGFGPVYKGVL-KNGDEIAVKRL--SGRSGQGLRELKNKLRLLGCCIDKDE 106
+ D +G G +G V V + G ++A+K+L +S + +LRLL ++
Sbjct: 27 YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENV 86
Query: 107 KILIYEYMPNKSLDFFLFDWVT--------------------RVR-IIEGIAQGLLYLHQ 145
L+ + P+++LD F ++ R++ ++ + +GL Y+H
Sbjct: 87 IGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHA 146
Query: 146 YSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANT---GRIVGTYRYMSPE 202
IIHRDLK N+ +++D KI DFG+AR QA++ G +V T Y +PE
Sbjct: 147 AG---IIHRDLKPGNLAVNEDCELKILDFGLAR-------QADSEMXGXVV-TRWYRAPE 195
Query: 203 YAIQGI-FSIKSDVFSFGVLLLKIVSGK 229
+ + ++ D++S G ++ ++++GK
Sbjct: 196 VILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 103/217 (47%), Gaps = 41/217 (18%)
Query: 42 SVSTATNKFSDANKLGEGGFGPVYKGV-LKNGDEIAVKRLSGRSGQGLRELKN---KLRL 97
++ ++ + + +G G +G V K G +AVK+LS R Q + K +LRL
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRL 74
Query: 98 LGCCIDKDEKILIYEYMPNKSL----DFFLFDWVTRVR--------------------II 133
L ++ L+ + P +SL D +L VT + +I
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYL---VTHLMGADLNNIVKCQKLTDDHVQFLI 131
Query: 134 EGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIV 193
I +GL Y+H IIHRDLK SN+ +++D KI D G+AR +E+ TG V
Sbjct: 132 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDRGLARHT-DDEM---TG-YV 183
Query: 194 GTYRYMSPEYAIQGI-FSIKSDVFSFGVLLLKIVSGK 229
T Y +PE + + ++ D++S G ++ ++++G+
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 103/225 (45%), Gaps = 33/225 (14%)
Query: 27 SKKKEVDQLPLFSFSSVSTAT-NKFSDANKLGEGGFGPVYKGVLKN-GDEIAVKRLSGRS 84
+K KE D L + + +TA ++F LG G FG V K G+ A+K L +
Sbjct: 13 AKAKE-DFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQK 71
Query: 85 GQGLRELK---NKLRLLGCC------------IDKDEKILIYEYMPNKSLDFFLFDWVTR 129
L++++ N+ R+L D ++ EY+P + F + R
Sbjct: 72 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRR 127
Query: 130 V-RIIEG-----IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGN 183
+ R E AQ +L + +I+RDLK N+L+D+ +++DFG A+ +G
Sbjct: 128 IGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG- 186
Query: 184 ELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
T + GT Y++PE + ++ D ++ GVL+ ++ +G
Sbjct: 187 ----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 104/225 (46%), Gaps = 33/225 (14%)
Query: 27 SKKKEVDQLPLFSFSSVSTAT-NKFSDANKLGEGGFGPVY-KGVLKNGDEIAVKRLSGRS 84
+K KE D L + + +TA ++F LG G FG V ++ G+ A+K L +
Sbjct: 20 AKAKE-DFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQK 78
Query: 85 GQGLRELK---NKLRLLGCC------------IDKDEKILIYEYMPNKSLDFFLFDWVTR 129
L++++ N+ R+L D ++ EY+P + F + R
Sbjct: 79 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRR 134
Query: 130 V-RIIEG-----IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGN 183
+ R E AQ +L + +I+RDLK N+L+D+ +++DFG A+ +G
Sbjct: 135 IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG- 193
Query: 184 ELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
T + GT Y++PE + ++ D ++ GVL+ ++ +G
Sbjct: 194 ----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 94/213 (44%), Gaps = 35/213 (16%)
Query: 42 SVSTATNKFSDANKLGEGGFGPV---YKGVLKNGDEIAVKRLSGRSGQGLRELKNKLR-- 96
S T ++ + +G G G V Y +L+ +A+K+LS R Q K R
Sbjct: 18 STFTVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLS-RPFQNQTHAKRAYREL 74
Query: 97 -LLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTRVRIIEGIAQ----------------- 138
L+ C K+ L+ + P KSL+ F ++ + ++Q
Sbjct: 75 VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQ 134
Query: 139 ---GLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGT 195
G+ +LH IIHRDLK SNI++ D KI DFG+AR + + T +V
Sbjct: 135 MLCGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMM--TPYVVTR 189
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
Y Y +PE + + D++S G ++ +++ G
Sbjct: 190 Y-YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 103/225 (45%), Gaps = 33/225 (14%)
Query: 27 SKKKEVDQLPLFSFSSVSTAT-NKFSDANKLGEGGFGPVY-KGVLKNGDEIAVKRLSGRS 84
+K KE D L + + +TA ++F LG G FG V ++ G+ A+K L +
Sbjct: 21 AKAKE-DFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQK 79
Query: 85 GQGLRELK---NKLRLLGCC------------IDKDEKILIYEYMPNKSLDFFLFDWVTR 129
L++++ N+ R+L D ++ EY P + F + R
Sbjct: 80 VVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRR 135
Query: 130 V-RIIEG-----IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGN 183
+ R E AQ +L + +I+RDLK N+++D+ K++DFG A+ +G
Sbjct: 136 IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG- 194
Query: 184 ELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
T + GT Y++PE + ++ D ++ GVL+ ++ +G
Sbjct: 195 ----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 93/203 (45%), Gaps = 31/203 (15%)
Query: 48 NKFSDANKLGEGGFGPVY-KGVLKNGDEIAVKRLSGRSGQGLRELKNKL---RLLGCC-- 101
++F LG G FG V ++ G+ A+K L + L+++++ L R+L
Sbjct: 27 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 86
Query: 102 ----------IDKDEKILIYEYMPNKSLDFFLFDWVTRV-RIIEG-----IAQGLLYLHQ 145
D ++ EY+P + F + R+ R E AQ +L
Sbjct: 87 PFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQIVLTFEY 142
Query: 146 YSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAI 205
+ +I+RDLK N+L+D+ +++DFG A+ +G T + GT Y++PE +
Sbjct: 143 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWTLCGTPEYLAPEIIL 197
Query: 206 QGIFSIKSDVFSFGVLLLKIVSG 228
++ D ++ GVL+ ++ +G
Sbjct: 198 SKGYNKAVDWWALGVLIYEMAAG 220
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 103/225 (45%), Gaps = 33/225 (14%)
Query: 27 SKKKEVDQLPLFSFSSVSTAT-NKFSDANKLGEGGFGPVY-KGVLKNGDEIAVKRLSGRS 84
+K KE D L + + +TA ++F LG G FG V ++ G+ A+K L +
Sbjct: 21 AKAKE-DFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQK 79
Query: 85 GQGLRELK---NKLRLLGCC------------IDKDEKILIYEYMPNKSLDFFLFDWVTR 129
L++++ N+ R+L D ++ EY P + F + R
Sbjct: 80 VVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRR 135
Query: 130 V-RIIEG-----IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGN 183
+ R E AQ +L + +I+RDLK N+++D+ K++DFG A+ +G
Sbjct: 136 IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG- 194
Query: 184 ELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
T + GT Y++PE + ++ D ++ GVL+ ++ +G
Sbjct: 195 ----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 104/225 (46%), Gaps = 33/225 (14%)
Query: 27 SKKKEVDQLPLFSFSSVSTAT-NKFSDANKLGEGGFGPVY-KGVLKNGDEIAVKRLSGRS 84
+K KE D L + + +TA ++F LG G FG V ++ G+ A+K L +
Sbjct: 21 AKAKE-DFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQK 79
Query: 85 GQGLRELK---NKLRLLGCC------------IDKDEKILIYEYMPNKSLDFFLFDWVTR 129
L++++ N+ R+L D ++ EY+P + F + R
Sbjct: 80 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRR 135
Query: 130 V-RIIEG-----IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGN 183
+ R E AQ +L + +I+RDLK N+L+D+ +++DFG A+ +G
Sbjct: 136 IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG- 194
Query: 184 ELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
T + GT Y++PE + ++ D ++ GVL+ ++ +G
Sbjct: 195 ----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 103/225 (45%), Gaps = 33/225 (14%)
Query: 27 SKKKEVDQLPLFSFSSVSTAT-NKFSDANKLGEGGFGPVY-KGVLKNGDEIAVKRLSGRS 84
+K KE D L + + +TA ++F LG G FG V ++ G+ A+K L +
Sbjct: 20 AKAKE-DFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQK 78
Query: 85 GQGLRELK---NKLRLLGCC------------IDKDEKILIYEYMPNKSLDFFLFDWVTR 129
L++++ N+ R+L D ++ EY P + F + R
Sbjct: 79 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRR 134
Query: 130 V-RIIEG-----IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGN 183
+ R E AQ +L + +I+RDLK N+++D+ K++DFG A+ +G
Sbjct: 135 IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG- 193
Query: 184 ELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
T + GT Y++PE + ++ D ++ GVL+ ++ +G
Sbjct: 194 ----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 104/225 (46%), Gaps = 33/225 (14%)
Query: 27 SKKKEVDQLPLFSFSSVSTAT-NKFSDANKLGEGGFGPVY-KGVLKNGDEIAVKRLSGRS 84
+K KE D L + + +TA ++F LG G FG V ++ G+ A+K L +
Sbjct: 20 AKAKE-DFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQK 78
Query: 85 GQGLRELK---NKLRLLGCC------------IDKDEKILIYEYMPNKSLDFFLFDWVTR 129
L++++ N+ R+L D ++ EY+P + F + R
Sbjct: 79 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRR 134
Query: 130 V-RIIEG-----IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGN 183
+ R E AQ +L + +I+RDLK N+L+D+ +++DFG A+ +G
Sbjct: 135 IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG- 193
Query: 184 ELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
T + GT Y++PE + ++ D ++ GVL+ ++ +G
Sbjct: 194 ----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 93/203 (45%), Gaps = 31/203 (15%)
Query: 48 NKFSDANKLGEGGFGPVY-KGVLKNGDEIAVKRLSGRSGQGLRELK---NKLRLLGCC-- 101
++F LG G FG V ++ G+ A+K L + L++++ N+ R+L
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 102 ----------IDKDEKILIYEYMPNKSLDFFLFDWVTRV-RIIEG-----IAQGLLYLHQ 145
D ++ EY+P + F + R+ R E AQ +L
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQIVLTFEY 157
Query: 146 YSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAI 205
+ +I+RDLK N+L+D+ +++DFG A+ +G T + GT Y++PE +
Sbjct: 158 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWTLCGTPEYLAPEIIL 212
Query: 206 QGIFSIKSDVFSFGVLLLKIVSG 228
++ D ++ GVL+ ++ +G
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 104/225 (46%), Gaps = 33/225 (14%)
Query: 27 SKKKEVDQLPLFSFSSVSTAT-NKFSDANKLGEGGFGPVY-KGVLKNGDEIAVKRLSGRS 84
+K KE D L + + +TA ++F LG G FG V ++ G+ A+K L +
Sbjct: 20 AKAKE-DFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQK 78
Query: 85 GQGLRELK---NKLRLLGCC------------IDKDEKILIYEYMPNKSLDFFLFDWVTR 129
L++++ N+ R+L D ++ EY+P + F + R
Sbjct: 79 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRR 134
Query: 130 V-RIIEG-----IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGN 183
+ R E AQ +L + +I+RDLK N+L+D+ +++DFG A+ +G
Sbjct: 135 IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG- 193
Query: 184 ELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
T + GT Y++PE + ++ D ++ GVL+ ++ +G
Sbjct: 194 ----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 94/213 (44%), Gaps = 35/213 (16%)
Query: 42 SVSTATNKFSDANKLGEGGFGPV---YKGVLKNGDEIAVKRLSGRSGQGLRELKNKLR-- 96
S T ++ + +G G G V Y +L+ +A+K+LS R Q K R
Sbjct: 18 STFTVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLS-RPFQNQTHAKRAYREL 74
Query: 97 -LLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTRVRIIEGIAQ----------------- 138
L+ C K+ L+ + P KSL+ F ++ + ++Q
Sbjct: 75 VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQ 134
Query: 139 ---GLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGT 195
G+ +LH IIHRDLK SNI++ D KI DFG+AR + + T +V
Sbjct: 135 MLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM--TPYVVTR 189
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
Y Y +PE + + D++S G ++ +++ G
Sbjct: 190 Y-YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 103/217 (47%), Gaps = 41/217 (18%)
Query: 42 SVSTATNKFSDANKLGEGGFGPVYKGV-LKNGDEIAVKRLSGRSGQGLRELKN---KLRL 97
++ ++ + + +G G +G V K G +AVK+LS R Q + K +LRL
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRL 74
Query: 98 LGCCIDKDEKILIYEYMPNKSL----DFFLFDWVTRVR--------------------II 133
L ++ L+ + P +SL D +L VT + +I
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYL---VTHLMGADLNNIVKCQKLTDDHVQFLI 131
Query: 134 EGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIV 193
I +GL Y+H IIHRDLK SN+ +++D KI D G+AR +E+ TG V
Sbjct: 132 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDGGLARHT-DDEM---TG-YV 183
Query: 194 GTYRYMSPEYAIQGI-FSIKSDVFSFGVLLLKIVSGK 229
T Y +PE + + ++ D++S G ++ ++++G+
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 103/225 (45%), Gaps = 33/225 (14%)
Query: 27 SKKKEVDQLPLFSFSSVSTAT-NKFSDANKLGEGGFGPVYKGVLKN-GDEIAVKRLSGRS 84
+K KE D L + + +TA ++F LG G FG V K G+ A+K L +
Sbjct: 13 AKAKE-DFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQK 71
Query: 85 GQGLRELK---NKLRLLGCC------------IDKDEKILIYEYMPNKSLDFFLFDWVTR 129
L++++ N+ R+L D ++ EY+P + F + R
Sbjct: 72 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRR 127
Query: 130 V-RIIEG-----IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGN 183
+ R E AQ +L + +I+RDLK N+L+D+ +++DFG A+ +G
Sbjct: 128 IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG- 186
Query: 184 ELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
T + GT Y++PE + ++ D ++ GVL+ ++ +G
Sbjct: 187 ----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 90/194 (46%), Gaps = 23/194 (11%)
Query: 56 LGE-GGFGPVYKGVLKNGDEIAV-KRLSGRSGQGLRELKNKLRLLGCC--------ID-- 103
+GE G FG VYK K +A K + +S + L + ++ +L C +D
Sbjct: 17 IGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 76
Query: 104 --KDEKILIYEYMPNKSLDFFLFDW---VTRVRIIEGIAQGLLYLHQYSRVRIIHRDLKV 158
++ ++ E+ ++D + + +T +I Q L L+ +IIHRDLK
Sbjct: 77 YYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKA 136
Query: 159 SNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAI-----QGIFSIKS 213
NIL D + K++DFG++ +Q +GT +M+PE + + K+
Sbjct: 137 GNILFTLDGDIKLADFGVSAKNTRTXIQRRDS-FIGTPYWMAPEVVMCETSKDRPYDYKA 195
Query: 214 DVFSFGVLLLKIVS 227
DV+S G+ L+++
Sbjct: 196 DVWSLGITLIEMAE 209
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 93/213 (43%), Gaps = 35/213 (16%)
Query: 42 SVSTATNKFSDANKLGEGGFGPV---YKGVLKNGDEIAVKRLSGRSGQGLRELKNKLR-- 96
S T ++ + +G G G V Y +L+ +A+K+LS R Q K R
Sbjct: 18 STFTVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLS-RPFQNQTHAKRAYREL 74
Query: 97 -LLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTRVRIIEGIAQ----------------- 138
L+ C K+ L+ + P KSL+ F ++ + + Q
Sbjct: 75 VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQ 134
Query: 139 ---GLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGT 195
G+ +LH IIHRDLK SNI++ D KI DFG+AR + + T +V
Sbjct: 135 MLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM--TPYVVTR 189
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
Y Y +PE + + D++S G ++ +++ G
Sbjct: 190 Y-YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 92/203 (45%), Gaps = 31/203 (15%)
Query: 48 NKFSDANKLGEGGFGPVYKGVLKN-GDEIAVKRLSGRSGQGLRELK---NKLRLLGCC-- 101
++F LG G FG V K G+ A+K L + L++++ N+ R+L
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 102 ----------IDKDEKILIYEYMPNKSLDFFLFDWVTRV-RIIEG-----IAQGLLYLHQ 145
D ++ EY+P + F + R+ R E AQ +L
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 146 YSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAI 205
+ +I+RDLK N+L+D+ +++DFG A+ +G T + GT Y++PE +
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAPEIIL 211
Query: 206 QGIFSIKSDVFSFGVLLLKIVSG 228
++ D ++ GVL+ ++ +G
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 93/213 (43%), Gaps = 35/213 (16%)
Query: 42 SVSTATNKFSDANKLGEGGFGPV---YKGVLKNGDEIAVKRLSGRSGQGLRELKNKLR-- 96
S T ++ + +G G G V Y +L+ +A+K+LS R Q K R
Sbjct: 18 STFTVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLS-RPFQNQTHAKRAYREL 74
Query: 97 -LLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTRVRIIEGIAQ----------------- 138
L+ C K+ L+ + P KSL+ F ++ + + Q
Sbjct: 75 VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQ 134
Query: 139 ---GLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGT 195
G+ +LH IIHRDLK SNI++ D KI DFG+AR + + T +V
Sbjct: 135 MLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM--TPYVVTR 189
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
Y Y +PE + + D++S G ++ +++ G
Sbjct: 190 Y-YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 103/225 (45%), Gaps = 33/225 (14%)
Query: 27 SKKKEVDQLPLFSFSSVSTAT-NKFSDANKLGEGGFGPVYKGVLKN-GDEIAVKRLSGRS 84
+K KE D L + + +TA ++F LG G FG V K G+ A+K L +
Sbjct: 20 AKAKE-DFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQK 78
Query: 85 GQGLRELK---NKLRLLGCC------------IDKDEKILIYEYMPNKSLDFFLFDWVTR 129
L++++ N+ R+L D ++ EY+P + F + R
Sbjct: 79 VVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEM----FSHLRR 134
Query: 130 V-RIIEG-----IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGN 183
+ R E AQ +L + +I+RDLK N+L+D+ +++DFG A+ +G
Sbjct: 135 IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG- 193
Query: 184 ELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
T + GT Y++PE + ++ D ++ GVL+ ++ +G
Sbjct: 194 ----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 99/206 (48%), Gaps = 33/206 (16%)
Query: 50 FSDANKLGEGGFGPVYKGVL-KNGDEIAVKR-LSGRSGQGLRELKNKLRLLGCCI----- 102
++D +G G FG VY+ L +G+ +A+K+ L G++ + REL+ +L C I
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN-RELQIMRKLDHCNIVRLRY 80
Query: 103 -------DKDEKIL--IYEYMPNKSLDFFLFDWVTRVRIIEGIAQGLLYLHQYSR----- 148
KDE L + +Y+P + + + +R + + LY++Q R
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVP--ATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 149 --VRIIHRDLKVSNILLDKDMNP-KISDFGIAR-ICRGNELQANTGRIVGTYRYMSPEYA 204
I HRD+K N+LLD D K+ DFG A+ + RG + N I Y Y +PE
Sbjct: 139 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG---EPNVSXICSRY-YRAPELI 194
Query: 205 IQGI-FSIKSDVFSFGVLLLKIVSGK 229
++ DV+S G +L +++ G+
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 92/203 (45%), Gaps = 31/203 (15%)
Query: 48 NKFSDANKLGEGGFGPVYKGVLKN-GDEIAVKRLSGRSGQGLRELK---NKLRLLGCC-- 101
++F LG G FG V K G+ A+K L + L++++ N+ R+L
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 102 ----------IDKDEKILIYEYMPNKSLDFFLFDWVTRV-RIIEG-----IAQGLLYLHQ 145
D ++ EY+P + F + R+ R E AQ +L
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 146 YSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAI 205
+ +I+RDLK N+L+D+ +++DFG A+ +G T + GT Y++PE +
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAPEIIL 211
Query: 206 QGIFSIKSDVFSFGVLLLKIVSG 228
++ D ++ GVL+ ++ +G
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 93/213 (43%), Gaps = 35/213 (16%)
Query: 42 SVSTATNKFSDANKLGEGGFGPV---YKGVLKNGDEIAVKRLSGRSGQGLRELKNKLR-- 96
S T ++ + +G G G V Y +L+ +A+K+LS R Q K R
Sbjct: 19 STFTVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLS-RPFQNQTHAKRAYREL 75
Query: 97 -LLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTRVRIIEGIAQ----------------- 138
L+ C K+ L+ + P KSL+ F ++ + + Q
Sbjct: 76 VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQ 135
Query: 139 ---GLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGT 195
G+ +LH IIHRDLK SNI++ D KI DFG+AR + + T +V
Sbjct: 136 MLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM--TPYVVTR 190
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
Y Y +PE + + D++S G ++ +++ G
Sbjct: 191 Y-YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 103/225 (45%), Gaps = 33/225 (14%)
Query: 27 SKKKEVDQLPLFSFSSVSTAT-NKFSDANKLGEGGFGPVYKGVLKN-GDEIAVKRLSGRS 84
+K KE D L + + +TA ++F LG G FG V K G+ A+K L +
Sbjct: 21 AKAKE-DFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQK 79
Query: 85 GQGLRELK---NKLRLLGCC------------IDKDEKILIYEYMPNKSLDFFLFDWVTR 129
L++++ N+ R+L D ++ EY+P + F + R
Sbjct: 80 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRR 135
Query: 130 V-RIIEG-----IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGN 183
+ R E AQ +L + +I+RDLK N+L+D+ +++DFG A+ +G
Sbjct: 136 IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG- 194
Query: 184 ELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
T + GT Y++PE + ++ D ++ GVL+ ++ +G
Sbjct: 195 ----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 103/225 (45%), Gaps = 33/225 (14%)
Query: 27 SKKKEVDQLPLFSFSSVSTAT-NKFSDANKLGEGGFGPVYKGVLKN-GDEIAVKRLSGRS 84
+K KE D L + + +TA ++F LG G FG V K G+ A+K L +
Sbjct: 21 AKAKE-DFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQK 79
Query: 85 GQGLRELK---NKLRLLGCC------------IDKDEKILIYEYMPNKSLDFFLFDWVTR 129
L++++ N+ R+L D ++ EY+P + F + R
Sbjct: 80 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRR 135
Query: 130 V-RIIEG-----IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGN 183
+ R E AQ +L + +I+RDLK N+L+D+ +++DFG A+ +G
Sbjct: 136 IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG- 194
Query: 184 ELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
T + GT Y++PE + ++ D ++ GVL+ ++ +G
Sbjct: 195 ----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 61/127 (48%), Gaps = 12/127 (9%)
Query: 132 IIEGIAQGLLYLHQYSRVRIIHRDLKVSNIL-LDKDMNPKI--SDFGIARICRGNELQAN 188
+I+ + + YLH+ I+HRDLK N+L L + N KI +DFG++++ E
Sbjct: 111 VIQQVLSAVKYLHENG---IVHRDLKPENLLYLTPEENSKIMITDFGLSKM----EQNGI 163
Query: 189 TGRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGKKTTGFYRTYSFTLLGYISE 248
GT Y++PE Q +S D +S GV+ ++ G FY L I E
Sbjct: 164 MSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCG--YPPFYEETESKLFEKIKE 221
Query: 249 NIYEFPS 255
YEF S
Sbjct: 222 GYYEFES 228
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 103/225 (45%), Gaps = 33/225 (14%)
Query: 27 SKKKEVDQLPLFSFSSVSTAT-NKFSDANKLGEGGFGPVYKGVLKN-GDEIAVKRLSGRS 84
+K KE D L + + +TA ++F LG G FG V K G+ A+K L +
Sbjct: 21 AKAKE-DFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQK 79
Query: 85 GQGLRELK---NKLRLLGCC------------IDKDEKILIYEYMPNKSLDFFLFDWVTR 129
L++++ N+ R+L D ++ EY+P + F + R
Sbjct: 80 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRR 135
Query: 130 V-RIIEG-----IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGN 183
+ R E AQ +L + +I+RDLK N+L+D+ +++DFG A+ +G
Sbjct: 136 IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG- 194
Query: 184 ELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
T + GT Y++PE + ++ D ++ GVL+ ++ +G
Sbjct: 195 ----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 98/206 (47%), Gaps = 33/206 (16%)
Query: 50 FSDANKLGEGGFGPVYKGVL-KNGDEIAVKR-LSGRSGQGLRELKNKLRLLGCCI----- 102
++D +G G FG VY+ L +G+ +A+K+ L G++ + REL+ +L C I
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN-RELQIMRKLDHCNIVRLRY 80
Query: 103 -------DKDEKIL--IYEYMPNKSLDFFLFDWVTRVRIIEGIAQGLLYLHQYSR----- 148
KDE L + +Y+P + + +R + + LY++Q R
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETV--YRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 149 --VRIIHRDLKVSNILLDKDMNP-KISDFGIAR-ICRGNELQANTGRIVGTYRYMSPEYA 204
I HRD+K N+LLD D K+ DFG A+ + RG + N I Y Y +PE
Sbjct: 139 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG---EPNVSYICSRY-YRAPELI 194
Query: 205 IQGI-FSIKSDVFSFGVLLLKIVSGK 229
++ DV+S G +L +++ G+
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 102/225 (45%), Gaps = 33/225 (14%)
Query: 27 SKKKEVDQLPLFSFSSVSTAT-NKFSDANKLGEGGFGPVYKGVLKN-GDEIAVKRLSGRS 84
+K KE D L + + +TA ++F LG G FG V K G+ A+K L +
Sbjct: 21 AKAKE-DFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQK 79
Query: 85 GQGLRELK---NKLRLLGCC------------IDKDEKILIYEYMPNKSLDFFLFDWVTR 129
L++++ N+ R+L D ++ EY P + F + R
Sbjct: 80 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRR 135
Query: 130 V-RIIEG-----IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGN 183
+ R E AQ +L + +I+RDLK N+++D+ K++DFG A+ +G
Sbjct: 136 IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG- 194
Query: 184 ELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
T + GT Y++PE + ++ D ++ GVL+ ++ +G
Sbjct: 195 ----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 96/200 (48%), Gaps = 34/200 (17%)
Query: 55 KLGEGGFGPVYK-GVLKNGDEIAVKRL-----SGRSGQGLRELKNKLRLLGC-------- 100
+LG G +G V K + +G +AVKR+ S + L +L +R + C
Sbjct: 58 ELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYG 117
Query: 101 CIDKDEKILIYEYMPNKSLDFFLFDWVTRVRIIE---------GIAQGLLYLHQYSRVRI 151
+ ++ + I + + SLD F + + + I I + L +LH S++ +
Sbjct: 118 ALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH--SKLSV 175
Query: 152 IHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRI-VGTYRYMSPEYA----IQ 206
IHRD+K SN+L++ K+ DFGI+ G + + I G YM+PE Q
Sbjct: 176 IHRDVKPSNVLINALGQVKMCDFGIS----GYLVDSVAKTIDAGCKPYMAPERINPELNQ 231
Query: 207 GIFSIKSDVFSFGVLLLKIV 226
+S+KSD++S G+ ++++
Sbjct: 232 KGYSVKSDIWSLGITMIELA 251
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 98/206 (47%), Gaps = 33/206 (16%)
Query: 50 FSDANKLGEGGFGPVYKGVL-KNGDEIAVKR-LSGRSGQGLRELKNKLRLLGCCI----- 102
++D +G G FG VY+ L +G+ +A+K+ L G++ + REL+ +L C I
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN-RELQIMRKLDHCNIVRLRY 80
Query: 103 -------DKDEKIL--IYEYMPNKSLDFFLFDWVTRVRIIEGIAQGLLYLHQYSR----- 148
KDE L + +Y+P + + +R + + LY++Q R
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETV--YRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 149 --VRIIHRDLKVSNILLDKDMNP-KISDFGIAR-ICRGNELQANTGRIVGTYRYMSPEYA 204
I HRD+K N+LLD D K+ DFG A+ + RG + N I Y Y +PE
Sbjct: 139 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG---EPNVSYICSRY-YRAPELI 194
Query: 205 IQGI-FSIKSDVFSFGVLLLKIVSGK 229
++ DV+S G +L +++ G+
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 101/225 (44%), Gaps = 33/225 (14%)
Query: 27 SKKKEVDQLPLFSFSSVSTAT-NKFSDANKLGEGGFGPVYKGVLKN-GDEIAVKRLSGRS 84
+K KE D L + + +TA ++F LG G FG V K G+ A+K L +
Sbjct: 21 AKAKE-DFLKKWESPAQNTAHLDQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQK 79
Query: 85 GQGLRELKNKL---------------RLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTR 129
L+++++ L +L D ++ EY P + F + R
Sbjct: 80 VVKLKQIEHTLNEKRIQQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEM----FSHLRR 135
Query: 130 V-RIIEG-----IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGN 183
+ R E AQ +L + +I+RDLK N+L+D+ K++DFG A+ +G
Sbjct: 136 IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG- 194
Query: 184 ELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
T + GT Y++PE + ++ D ++ GVL+ ++ +G
Sbjct: 195 ----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 102/222 (45%), Gaps = 44/222 (19%)
Query: 49 KFSDANKLGEGGFGPVYKGV-LKNGDEIAVKRL------SGRSGQGLREL---------K 92
K+ KLG+G +G V+K + + G+ +AVK++ S + + RE+ +
Sbjct: 10 KYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHE 69
Query: 93 NKLRLLGCC-IDKDEKI-LIYEYMP---NKSLDFFLFDWVTRVRIIEGIAQGLLYLHQYS 147
N + LL D D + L+++YM + + + + V + ++ + + + YLH
Sbjct: 70 NIVNLLNVLRADNDRDVYLVFDYMETDLHAVIRANILEPVHKQYVVYQLIKVIKYLHSGG 129
Query: 148 RVRIIHRDLKVSNILLDKDMNPKISDFG-------IARICRGNELQANTGR--------- 191
++HRD+K SNILL+ + + K++DFG I R+ L N
Sbjct: 130 ---LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPI 186
Query: 192 ---IVGTYRYMSPEYAIQGIFSIKS-DVFSFGVLLLKIVSGK 229
V T Y +PE + K D++S G +L +I+ GK
Sbjct: 187 LTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 53/94 (56%), Gaps = 5/94 (5%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGT 195
I+ L YLH+ II+RDLK+ N+LLD + + K++D+G+ + G T GT
Sbjct: 130 ISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCGT 184
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGK 229
Y++PE + D ++ GVL+ ++++G+
Sbjct: 185 PNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 218
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 103/225 (45%), Gaps = 33/225 (14%)
Query: 27 SKKKEVDQLPLFSFSSVSTAT-NKFSDANKLGEGGFGPVYKGVLKN-GDEIAVKRLSGRS 84
+K KE D L + + +TA ++F LG G FG V K G+ A+K L +
Sbjct: 41 AKAKE-DFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQK 99
Query: 85 GQGLRELK---NKLRLLGCC------------IDKDEKILIYEYMPNKSLDFFLFDWVTR 129
L++++ N+ R+L D ++ EY+P + F + R
Sbjct: 100 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRR 155
Query: 130 V-RIIEG-----IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGN 183
+ R E AQ +L + +I+RDLK N+L+D+ +++DFG A+ +G
Sbjct: 156 IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG- 214
Query: 184 ELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
T + GT Y++PE + ++ D ++ GVL+ ++ +G
Sbjct: 215 ----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 53/94 (56%), Gaps = 5/94 (5%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGT 195
I+ L YLH+ II+RDLK+ N+LLD + + K++D+G+ + G T GT
Sbjct: 162 ISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSTFCGT 216
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGK 229
Y++PE + D ++ GVL+ ++++G+
Sbjct: 217 PNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 250
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 94/226 (41%), Gaps = 57/226 (25%)
Query: 50 FSDANKLGEGGFGPVYKGVLKNGD-EIAVKRLS-----------GRSGQGLRELKNK--L 95
F LG GGFG V++ K D A+KR+ R + L +L++ +
Sbjct: 7 FEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIV 66
Query: 96 RLLGCCIDKDEKILIYEYMPNKSLDFFLF------------DWVTRVRIIE--------- 134
R ++K+ E + S +L+ DW+ IE
Sbjct: 67 RYFNAWLEKN----TTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLH 122
Query: 135 ---GIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQA---- 187
IA+ + +LH ++HRDLK SNI D K+ DFG+ +E +
Sbjct: 123 IFLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLT 179
Query: 188 -------NTGRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIV 226
+TG+ VGT YMSPE +S K D+FS G++L +++
Sbjct: 180 PMPAYARHTGQ-VGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 63/109 (57%), Gaps = 12/109 (11%)
Query: 124 FDWVTRVRIIEGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKD---MNPKISDFGIAR-I 179
FD I++ I G+ YLH+++ I+HRD+K NILL+ +N KI DFG++
Sbjct: 143 FDECDAANIMKQILSGICYLHKHN---IVHRDIKPENILLENKNSLLNIKIVDFGLSSFF 199
Query: 180 CRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
+ +L+ +GT Y++PE ++ ++ K DV+S GV++ ++ G
Sbjct: 200 SKDYKLRDR----LGTAYYIAPE-VLKKKYNEKCDVWSCGVIMYILLCG 243
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 5/94 (5%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGT 195
I L YLH +++RD+K+ N++LDKD + KI+DFG+ + G A GT
Sbjct: 119 IVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGT 173
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGK 229
Y++PE + D + GV++ +++ G+
Sbjct: 174 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 103/225 (45%), Gaps = 33/225 (14%)
Query: 27 SKKKEVDQLPLFSFSSVSTAT-NKFSDANKLGEGGFGPVY-KGVLKNGDEIAVKRLSGRS 84
+K KE D L + + +TA ++F LG G FG V ++ G+ A+K L +
Sbjct: 20 AKAKE-DFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQK 78
Query: 85 GQGLRELK---NKLRLLGCC------------IDKDEKILIYEYMPNKSLDFFLFDWVTR 129
L++++ N+ R+L D ++ EY P + F + R
Sbjct: 79 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRR 134
Query: 130 V-RIIEG-----IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGN 183
+ R E AQ +L + +I+RDLK N+++D+ +++DFG A+ +G
Sbjct: 135 IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKG- 193
Query: 184 ELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
T + GT Y++PE + ++ D ++ GVL+ ++ +G
Sbjct: 194 ----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 53/94 (56%), Gaps = 5/94 (5%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGT 195
I+ L YLH+ II+RDLK+ N+LLD + + K++D+G+ + G T GT
Sbjct: 115 ISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCGT 169
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGK 229
Y++PE + D ++ GVL+ ++++G+
Sbjct: 170 PNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 203
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 5/94 (5%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGT 195
I L YLH +++RD+K+ N++LDKD + KI+DFG+ + G A GT
Sbjct: 114 IVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGT 168
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGK 229
Y++PE + D + GV++ +++ G+
Sbjct: 169 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 72/140 (51%), Gaps = 21/140 (15%)
Query: 95 LRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTRVRIIEGIAQGLLYLHQYSRVRIIHR 154
+ L+G C +K +K + +P + L ++ I + L YL + + +IHR
Sbjct: 103 MELMGTCAEKLKKRM-QGPIPERILG----------KMTVAIVKALYYLKE--KHGVIHR 149
Query: 155 DLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEY-----AIQGIF 209
D+K SNILLD+ K+ DFGI+ ++ + R G YM+PE + +
Sbjct: 150 DVKPSNILLDERGQIKLCDFGISGRLVDDKAKD---RSAGCAAYMAPERIDPPDPTKPDY 206
Query: 210 SIKSDVFSFGVLLLKIVSGK 229
I++DV+S G+ L+++ +G+
Sbjct: 207 DIRADVWSLGISLVELATGQ 226
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 53/94 (56%), Gaps = 5/94 (5%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGT 195
I+ L YLH+ II+RDLK+ N+LLD + + K++D+G+ + G T GT
Sbjct: 119 ISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCGT 173
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGK 229
Y++PE + D ++ GVL+ ++++G+
Sbjct: 174 PNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 207
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 5/94 (5%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGT 195
I L YLH +++RD+K+ N++LDKD + KI+DFG+ + G A GT
Sbjct: 114 IVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGT 168
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGK 229
Y++PE + D + GV++ +++ G+
Sbjct: 169 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 98/216 (45%), Gaps = 39/216 (18%)
Query: 42 SVSTATNKFSDANKLGEGGFGPV---YKGVLKNGDEIAVKRLSGRSGQGL---RELKNKL 95
+V + +G G +G V Y L+ ++AVK+LS R Q L R +L
Sbjct: 14 TVWEVPQRLQGLRPVGSGAYGSVCSAYDARLRQ--KVAVKKLS-RPFQSLIHARRTYREL 70
Query: 96 RLLGCCIDKDEKILIYEYMPNKSL-DFFLFDWVTRVR--------------------IIE 134
RLL ++ L+ + P S+ DF VT + ++
Sbjct: 71 RLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVY 130
Query: 135 GIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVG 194
+ +GL Y+H IIHRDLK SN+ +++D +I DFG+AR + TG V
Sbjct: 131 QLLRGLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFGLARQAD----EEMTG-YVA 182
Query: 195 TYRYMSPEYAIQGI-FSIKSDVFSFGVLLLKIVSGK 229
T Y +PE + + ++ D++S G ++ +++ GK
Sbjct: 183 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 5/94 (5%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGT 195
I L YLH +++RD+K+ N++LDKD + KI+DFG+ + G A GT
Sbjct: 114 IVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTFCGT 168
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGK 229
Y++PE + D + GV++ +++ G+
Sbjct: 169 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 90/214 (42%), Gaps = 35/214 (16%)
Query: 42 SVSTATNKFSDANKLGEGGFGPV---YKGVLKNGDEIAVKRLSGRSGQGLRELKNKLR-- 96
S T ++ + +G G G V Y +L+ +A+K+LS R Q K R
Sbjct: 18 STFTVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLS-RPFQNQTHAKRAYREL 74
Query: 97 -LLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTRVRIIEGIAQ----------------- 138
L+ C K+ L+ + P KSL+ F ++ + + Q
Sbjct: 75 VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQ 134
Query: 139 ---GLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGT 195
G+ +LH IIHRDLK SNI++ D KI DFG+AR G +
Sbjct: 135 MLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMMEPEVVTRY 190
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGK 229
YR +PE + + D++S G ++ ++V K
Sbjct: 191 YR--APEVILGMGYKENVDIWSVGCIMGEMVCHK 222
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 5/94 (5%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGT 195
I L YLH +++RD+K+ N++LDKD + KI+DFG+ + G A GT
Sbjct: 114 IVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGT 168
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGK 229
Y++PE + D + GV++ +++ G+
Sbjct: 169 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 91/213 (42%), Gaps = 35/213 (16%)
Query: 42 SVSTATNKFSDANKLGEGGFGPV---YKGVLKNGDEIAVKRLSGRSGQGLRELKNKLR-- 96
S T ++ + +G G G V Y +L+ +A+K+LS R Q K R
Sbjct: 20 STFTVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLS-RPFQNQTHAKRAYREL 76
Query: 97 -LLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTRVRIIEGIAQ----------------- 138
L+ C K+ L+ + P KSL+ F ++ + + Q
Sbjct: 77 VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQ 136
Query: 139 ---GLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGT 195
G+ +LH IIHRDLK SNI++ D KI DFG+AR + + V T
Sbjct: 137 MLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVP---FVVT 190
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
Y +PE + + D++S G ++ +++ G
Sbjct: 191 RYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 99/213 (46%), Gaps = 36/213 (16%)
Query: 42 SVSTATNKFSDANKLGEGGFGPVYK-GVLKNGDEIAVKRL-----SGRSGQGLRELKNKL 95
S+ + +LG G +G V K + +G +AVKR+ S + L +L +
Sbjct: 1 SMEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISM 60
Query: 96 RLLGC--------CIDKDEKILIYEYMPNKSLDFFLFDWVTRVRIIE---------GIAQ 138
R + C + ++ + I + + SLD F + + + I I +
Sbjct: 61 RTVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVK 120
Query: 139 GLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIV--GTY 196
L +LH S++ +IHRD+K SN+L++ K+ DFGI+ L + + + G
Sbjct: 121 ALEHLH--SKLSVIHRDVKPSNVLINALGQVKMCDFGIS-----GYLVDDVAKDIDAGCK 173
Query: 197 RYMSPEYA----IQGIFSIKSDVFSFGVLLLKI 225
YM+PE Q +S+KSD++S G+ ++++
Sbjct: 174 PYMAPERINPELNQKGYSVKSDIWSLGITMIEL 206
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 5/94 (5%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGT 195
I L YLH +++RD+K+ N++LDKD + KI+DFG+ + G A GT
Sbjct: 114 IVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTFCGT 168
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGK 229
Y++PE + D + GV++ +++ G+
Sbjct: 169 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 5/94 (5%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGT 195
I L YLH +++RD+K+ N++LDKD + KI+DFG+ + G A GT
Sbjct: 117 IVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTFCGT 171
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGK 229
Y++PE + D + GV++ +++ G+
Sbjct: 172 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 205
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 88/205 (42%), Gaps = 39/205 (19%)
Query: 56 LGEGGFGPVYKGV-LKNGDEIAVK-----RLSGRSGQGLRELKNKLRLLGCCIDKDEKI- 108
+G+G F V + + + G + AVK + + G +LK + + C + K I
Sbjct: 32 IGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASI--CHMLKHPHIV 89
Query: 109 -------------LIYEYMPNKSLDF---------FLFDWVTRVRIIEGIAQGLLYLHQY 146
+++E+M L F F++ + I + L Y H
Sbjct: 90 ELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN 149
Query: 147 SRVRIIHRDLKVSNILLDKDMNP---KISDFGIARICRGNELQANTGRIVGTYRYMSPEY 203
+ IIHRD+K N+LL N K+ DFG+A I G GR VGT +M+PE
Sbjct: 150 N---IIHRDVKPENVLLASKENSAPVKLGDFGVA-IQLGESGLVAGGR-VGTPHFMAPEV 204
Query: 204 AIQGIFSIKSDVFSFGVLLLKIVSG 228
+ + DV+ GV+L ++SG
Sbjct: 205 VKREPYGKPVDVWGCGVILFILLSG 229
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 72/143 (50%), Gaps = 12/143 (8%)
Query: 101 CIDKDEKIL--IYEYMPNKSLDFFLFDWVTRVRIIE-GIAQGLLYLHQYSRVRIIHRDLK 157
C +D+K L + EYMP L + ++ + + A+ +L L + +IHRD+K
Sbjct: 142 CAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVK 201
Query: 158 VSNILLDKDMNPKISDFGIA-RICRGNELQANTGRIVGTYRYMSPE----YAIQGIFSIK 212
N+LLDK + K++DFG ++ + +T VGT Y+SPE G + +
Sbjct: 202 PDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTA--VGTPDYISPEVLKSQGGDGYYGRE 259
Query: 213 SDVFSFGVLLLKIVSGKKTTGFY 235
D +S GV L +++ G T FY
Sbjct: 260 CDWWSVGVFLFEMLVG--DTPFY 280
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 94/213 (44%), Gaps = 35/213 (16%)
Query: 42 SVSTATNKFSDANKLGEGGFGPV---YKGVLKNGDEIAVKRLSGRSGQGLRELKNKLR-- 96
S T ++ + +G G G V Y +L+ +A+K+LS R Q K R
Sbjct: 18 STFTVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLS-RPFQNQTHAKRAYREL 74
Query: 97 -LLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTRVRIIEGIAQ----------------- 138
L+ K+ L+ + P KSL+ F ++ + ++Q
Sbjct: 75 VLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQ 134
Query: 139 ---GLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGT 195
G+ +LH IIHRDLK SNI++ D KI DFG+AR + + T +V
Sbjct: 135 MLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMM--TPYVVTR 189
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
Y Y +PE + + D++S GV++ +++ G
Sbjct: 190 Y-YRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 92/211 (43%), Gaps = 29/211 (13%)
Query: 42 SVSTATNKFSDANKLGEGGFGPV---YKGVLKNGDEIAVKRLSGRSGQGLRELKNKLR-- 96
S T ++ + +G G G V Y VL +A+K+LS R Q K R
Sbjct: 18 STFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLS-RPFQNQTHAKRAYREL 74
Query: 97 -LLGCCIDKDEKILIYEYMPNKSLDFF--------LFD----WVTRVRIIEGIAQGLLY- 142
L+ C K+ L+ + P K+L+ F L D V ++ + LLY
Sbjct: 75 VLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQ 134
Query: 143 ----LHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRY 198
+ IIHRDLK SNI++ D KI DFG+AR + + T +V Y Y
Sbjct: 135 MLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMM--TPYVVTRY-Y 191
Query: 199 MSPEYAIQGIFSIKSDVFSFGVLLLKIVSGK 229
+PE + + D++S G ++ ++V K
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 92/211 (43%), Gaps = 29/211 (13%)
Query: 42 SVSTATNKFSDANKLGEGGFGPV---YKGVLKNGDEIAVKRLSGRSGQGLRELKNKLR-- 96
S T ++ + +G G G V Y VL +A+K+LS R Q K R
Sbjct: 11 STFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLS-RPFQNQTHAKRAYREL 67
Query: 97 -LLGCCIDKDEKILIYEYMPNKSLDFF--------LFD----WVTRVRIIEGIAQGLLY- 142
L+ C K+ L+ + P K+L+ F L D V ++ + LLY
Sbjct: 68 VLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQ 127
Query: 143 ----LHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRY 198
+ IIHRDLK SNI++ D KI DFG+AR + + T +V Y Y
Sbjct: 128 MLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMM--TPYVVTRY-Y 184
Query: 199 MSPEYAIQGIFSIKSDVFSFGVLLLKIVSGK 229
+PE + + D++S G ++ ++V K
Sbjct: 185 RAPEVILGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 92/211 (43%), Gaps = 29/211 (13%)
Query: 42 SVSTATNKFSDANKLGEGGFGPV---YKGVLKNGDEIAVKRLSGRSGQGLRELKNKLR-- 96
S T ++ + +G G G V Y VL +A+K+LS R Q K R
Sbjct: 56 STFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLS-RPFQNQTHAKRAYREL 112
Query: 97 -LLGCCIDKDEKILIYEYMPNKSLDFF--------LFD----WVTRVRIIEGIAQGLLY- 142
L+ C K+ L+ + P K+L+ F L D V ++ + LLY
Sbjct: 113 VLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQ 172
Query: 143 ----LHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRY 198
+ IIHRDLK SNI++ D KI DFG+AR + + T +V Y Y
Sbjct: 173 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM--TPYVVTRY-Y 229
Query: 199 MSPEYAIQGIFSIKSDVFSFGVLLLKIVSGK 229
+PE + + D++S G ++ ++V K
Sbjct: 230 RAPEVILGMGYKENVDIWSVGCIMGEMVRHK 260
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 94/213 (44%), Gaps = 35/213 (16%)
Query: 42 SVSTATNKFSDANKLGEGGFGPV---YKGVLKNGDEIAVKRLSGRSGQGLRELKNKLR-- 96
S T ++ + +G G G V Y +L+ +A+K+LS R Q K R
Sbjct: 18 STFTVLKRYQNLKPIGSGAQGIVVAAYDAILERN--VAIKKLS-RPFQNQTHAKRAYREL 74
Query: 97 -LLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTRVRIIEGIAQ----------------- 138
L+ K+ L+ + P KSL+ F ++ + ++Q
Sbjct: 75 VLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQ 134
Query: 139 ---GLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGT 195
G+ +LH IIHRDLK SNI++ D KI DFG+AR + + T +V
Sbjct: 135 MLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMM--TPYVVTR 189
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
Y Y +PE + + D++S GV++ +++ G
Sbjct: 190 Y-YRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 98/216 (45%), Gaps = 39/216 (18%)
Query: 42 SVSTATNKFSDANKLGEGGFGPV---YKGVLKNGDEIAVKRLSGRSGQGL---RELKNKL 95
+V + +G G +G V Y L+ ++AVK+LS R Q L R +L
Sbjct: 22 TVWEVPQRLQGLRPVGSGAYGSVCSAYDARLRQ--KVAVKKLS-RPFQSLIHARRTYREL 78
Query: 96 RLLGCCIDKDEKILIYEYMPNKSL-DFFLFDWVTRVR--------------------IIE 134
RLL ++ L+ + P S+ DF VT + ++
Sbjct: 79 RLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVY 138
Query: 135 GIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVG 194
+ +GL Y+H IIHRDLK SN+ +++D +I DFG+AR + TG V
Sbjct: 139 QLLRGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQAD----EEMTG-YVA 190
Query: 195 TYRYMSPEYAIQGI-FSIKSDVFSFGVLLLKIVSGK 229
T Y +PE + + ++ D++S G ++ +++ GK
Sbjct: 191 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 92/211 (43%), Gaps = 29/211 (13%)
Query: 42 SVSTATNKFSDANKLGEGGFGPV---YKGVLKNGDEIAVKRLSGRSGQGLRELKNKLR-- 96
S T ++ + +G G G V Y VL +A+K+LS R Q K R
Sbjct: 18 STFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLS-RPFQNQTHAKRAYREL 74
Query: 97 -LLGCCIDKDEKILIYEYMPNKSLDFF--------LFD----WVTRVRIIEGIAQGLLY- 142
L+ C K+ L+ + P K+L+ F L D V ++ + LLY
Sbjct: 75 VLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQ 134
Query: 143 ----LHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRY 198
+ IIHRDLK SNI++ D KI DFG+AR + + T +V Y Y
Sbjct: 135 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM--TPYVVTRY-Y 191
Query: 199 MSPEYAIQGIFSIKSDVFSFGVLLLKIVSGK 229
+PE + + D++S G ++ ++V K
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 142 YLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSP 201
YLH + +I+RDLK N+L+D+ +++DFG A+ +G T + GT Y++P
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLAGTPEYLAP 207
Query: 202 EYAIQGIFSIKSDVFSFGVLLLKIVSG 228
E + ++ D ++ GVL+ ++ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 92/211 (43%), Gaps = 29/211 (13%)
Query: 42 SVSTATNKFSDANKLGEGGFGPV---YKGVLKNGDEIAVKRLSGRSGQGLRELKNKLR-- 96
S T ++ + +G G G V Y VL +A+K+LS R Q K R
Sbjct: 19 STFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLS-RPFQNQTHAKRAYREL 75
Query: 97 -LLGCCIDKDEKILIYEYMPNKSLDFF--------LFD----WVTRVRIIEGIAQGLLY- 142
L+ C K+ L+ + P K+L+ F L D V ++ + LLY
Sbjct: 76 VLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQ 135
Query: 143 ----LHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRY 198
+ IIHRDLK SNI++ D KI DFG+AR + + T +V Y Y
Sbjct: 136 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM--TPYVVTRY-Y 192
Query: 199 MSPEYAIQGIFSIKSDVFSFGVLLLKIVSGK 229
+PE + + D++S G ++ ++V K
Sbjct: 193 RAPEVILGMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 93/214 (43%), Gaps = 35/214 (16%)
Query: 42 SVSTATNKFSDANKLGEGGFGPV---YKGVLKNGDEIAVKRLSGRSGQGLRELKNKLR-- 96
S T ++ + +G G G V Y +L+ +A+K+LS R Q K R
Sbjct: 12 STFTVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLS-RPFQNQTHAKRAYREL 68
Query: 97 -LLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTRVRIIEGIAQ----------------- 138
L+ C K+ L+ + P KSL+ F ++ + + Q
Sbjct: 69 VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQ 128
Query: 139 ---GLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGT 195
G+ +LH IIHRDLK SNI++ D KI DFG+AR + + T +V
Sbjct: 129 MLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM--TPYVVTR 183
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGK 229
Y Y +PE + + D++S G ++ ++V K
Sbjct: 184 Y-YRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 216
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 92/211 (43%), Gaps = 29/211 (13%)
Query: 42 SVSTATNKFSDANKLGEGGFGPV---YKGVLKNGDEIAVKRLSGRSGQGLRELKNKLR-- 96
S T ++ + +G G G V Y VL +A+K+LS R Q K R
Sbjct: 17 STFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLS-RPFQNQTHAKRAYREL 73
Query: 97 -LLGCCIDKDEKILIYEYMPNKSLDFF--------LFD----WVTRVRIIEGIAQGLLY- 142
L+ C K+ L+ + P K+L+ F L D V ++ + LLY
Sbjct: 74 VLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQ 133
Query: 143 ----LHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRY 198
+ IIHRDLK SNI++ D KI DFG+AR + + T +V Y Y
Sbjct: 134 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM--TPYVVTRY-Y 190
Query: 199 MSPEYAIQGIFSIKSDVFSFGVLLLKIVSGK 229
+PE + + D++S G ++ ++V K
Sbjct: 191 RAPEVILGMGYKENVDIWSVGCIMGEMVRHK 221
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 93/214 (43%), Gaps = 35/214 (16%)
Query: 42 SVSTATNKFSDANKLGEGGFGPV---YKGVLKNGDEIAVKRLSGRSGQGLRELKNKLR-- 96
S T ++ + +G G G V Y +L+ +A+K+LS R Q K R
Sbjct: 23 STFTVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLS-RPFQNQTHAKRAYREL 79
Query: 97 -LLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTRVRIIEGIAQ----------------- 138
L+ C K+ L+ + P KSL+ F ++ + + Q
Sbjct: 80 VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQ 139
Query: 139 ---GLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGT 195
G+ +LH IIHRDLK SNI++ D KI DFG+AR + + T +V
Sbjct: 140 MLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM--TPYVVTR 194
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGK 229
Y Y +PE + + D++S G ++ ++V K
Sbjct: 195 Y-YRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 227
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 31/205 (15%)
Query: 50 FSDANKLGEGGFGPVYKGVL-KNGDEIAVKRLSGRSGQGLRELKNKLRLLGCCI------ 102
++D +G G FG VY+ L +G+ +A+K++ REL+ +L C I
Sbjct: 41 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYF 100
Query: 103 ------DKDEKIL--IYEYMPNKSLDFFLFDWVTRVRIIEGIAQGLLYLHQYSR------ 148
KDE L + +Y+P + + +R + + LY++Q R
Sbjct: 101 FYSSGEKKDEVYLNLVLDYVPETV--YRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 158
Query: 149 -VRIIHRDLKVSNILLDKDMNP-KISDFGIAR-ICRGNELQANTGRIVGTYRYMSPEYAI 205
I HRD+K N+LLD D K+ DFG A+ + RG + N I Y Y +PE
Sbjct: 159 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG---EPNVSXICSRY-YRAPELIF 214
Query: 206 QGI-FSIKSDVFSFGVLLLKIVSGK 229
++ DV+S G +L +++ G+
Sbjct: 215 GATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 92/200 (46%), Gaps = 33/200 (16%)
Query: 56 LGEGGFGPVYKG----VLKNGDEIAVKRLSG-----------RSGQGLREL--KNKLRLL 98
+G+G FG VY G +N + A+K LS R G +R L N L L+
Sbjct: 29 IGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALI 88
Query: 99 GCCIDKDE-KILIYEYMPNKSLDFFLFDWVTRVRIIE------GIAQGLLYLHQYSRVRI 151
G + + ++ YM + L F+ + + +A+G+ YL + +
Sbjct: 89 GIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYL---AEQKF 145
Query: 152 IHRDLKVSNILLDKDMNPKISDFGIARICRGNEL----QANTGRIVGTYRYMSPEYAIQG 207
+HRDL N +LD+ K++DFG+AR E Q R+ ++ + E
Sbjct: 146 VHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARL--PVKWTALESLQTY 203
Query: 208 IFSIKSDVFSFGVLLLKIVS 227
F+ KSDV+SFGVLL ++++
Sbjct: 204 RFTTKSDVWSFGVLLWELLT 223
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 92/211 (43%), Gaps = 29/211 (13%)
Query: 42 SVSTATNKFSDANKLGEGGFGPV---YKGVLKNGDEIAVKRLSGRSGQGLRELKNKLR-- 96
S T ++ + +G G G V Y VL +A+K+LS R Q K R
Sbjct: 18 STFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLS-RPFQNQTHAKRAYREL 74
Query: 97 -LLGCCIDKDEKILIYEYMPNKSLDFF--------LFD----WVTRVRIIEGIAQGLLY- 142
L+ C K+ L+ + P K+L+ F L D V ++ + LLY
Sbjct: 75 VLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQ 134
Query: 143 ----LHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRY 198
+ IIHRDLK SNI++ D KI DFG+AR + + T +V Y Y
Sbjct: 135 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM--TPYVVTRY-Y 191
Query: 199 MSPEYAIQGIFSIKSDVFSFGVLLLKIVSGK 229
+PE + + D++S G ++ ++V K
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 92/211 (43%), Gaps = 29/211 (13%)
Query: 42 SVSTATNKFSDANKLGEGGFGPV---YKGVLKNGDEIAVKRLSGRSGQGLRELKNKLR-- 96
S T ++ + +G G G V Y VL +A+K+LS R Q K R
Sbjct: 56 STFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLS-RPFQNQTHAKRAYREL 112
Query: 97 -LLGCCIDKDEKILIYEYMPNKSLDFF--------LFD----WVTRVRIIEGIAQGLLY- 142
L+ C K+ L+ + P K+L+ F L D V ++ + LLY
Sbjct: 113 VLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQ 172
Query: 143 ----LHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRY 198
+ IIHRDLK SNI++ D KI DFG+AR + + T +V Y Y
Sbjct: 173 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM--TPYVVTRY-Y 229
Query: 199 MSPEYAIQGIFSIKSDVFSFGVLLLKIVSGK 229
+PE + + D++S G ++ ++V K
Sbjct: 230 RAPEVILGMGYKENVDIWSVGCIMGEMVRHK 260
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 62/128 (48%), Gaps = 11/128 (8%)
Query: 131 RIIEGIAQGLLYLHQYSRVRIIHRDLKVSNIL---LDKDMNPKISDFGIARICRGNELQA 187
R+I + + YLH + I+HRDLK N+L LD+D ISDFG++++ + +
Sbjct: 120 RLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLS 176
Query: 188 NTGRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGKKTTGFYRTYSFTLLGYIS 247
GT Y++PE Q +S D +S GV+ ++ G FY L I
Sbjct: 177 TA---CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP--FYDENDAKLFEQIL 231
Query: 248 ENIYEFPS 255
+ YEF S
Sbjct: 232 KAEYEFDS 239
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 98/216 (45%), Gaps = 39/216 (18%)
Query: 42 SVSTATNKFSDANKLGEGGFGPV---YKGVLKNGDEIAVKRLSGRSGQGL---RELKNKL 95
+V + +G G +G V Y L+ ++AVK+LS R Q L R +L
Sbjct: 22 TVWEVPQRLQGLRPVGSGAYGSVCSAYDARLRQ--KVAVKKLS-RPFQSLIHARRTYREL 78
Query: 96 RLLGCCIDKDEKILIYEYMPNKSL-DFFLFDWVTRVR--------------------IIE 134
RLL ++ L+ + P S+ DF VT + ++
Sbjct: 79 RLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVY 138
Query: 135 GIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVG 194
+ +GL Y+H IIHRDLK SN+ +++D +I DFG+AR + TG V
Sbjct: 139 QLLRGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQAD----EEMTG-YVA 190
Query: 195 TYRYMSPEYAIQGI-FSIKSDVFSFGVLLLKIVSGK 229
T Y +PE + + ++ D++S G ++ +++ GK
Sbjct: 191 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 31/205 (15%)
Query: 50 FSDANKLGEGGFGPVYKGVL-KNGDEIAVKRLSGRSGQGLRELKNKLRLLGCCI------ 102
++D +G G FG VY+ L +G+ +A+K++ REL+ +L C I
Sbjct: 23 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYF 82
Query: 103 ------DKDEKIL--IYEYMPNKSLDFFLFDWVTRVRIIEGIAQGLLYLHQYSR------ 148
KDE L + +Y+P + + +R + + LY++Q R
Sbjct: 83 FYSSGEKKDEVYLNLVLDYVPETV--YRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 140
Query: 149 -VRIIHRDLKVSNILLDKDMNP-KISDFGIAR-ICRGNELQANTGRIVGTYRYMSPEYAI 205
I HRD+K N+LLD D K+ DFG A+ + RG + N I Y Y +PE
Sbjct: 141 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG---EPNVSXICSRY-YRAPELIF 196
Query: 206 QGI-FSIKSDVFSFGVLLLKIVSGK 229
++ DV+S G +L +++ G+
Sbjct: 197 GATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 31/205 (15%)
Query: 50 FSDANKLGEGGFGPVYKGVL-KNGDEIAVKRLSGRSGQGLRELKNKLRLLGCCI------ 102
++D +G G FG VY+ L +G+ +A+K++ REL+ +L C I
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYF 81
Query: 103 ------DKDEKIL--IYEYMPNKSLDFFLFDWVTRVRIIEGIAQGLLYLHQYSR------ 148
KDE L + +Y+P + + +R + + LY++Q R
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPETV--YRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 149 -VRIIHRDLKVSNILLDKDMNP-KISDFGIAR-ICRGNELQANTGRIVGTYRYMSPEYAI 205
I HRD+K N+LLD D K+ DFG A+ + RG + N I Y Y +PE
Sbjct: 140 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG---EPNVSXICSRY-YRAPELIF 195
Query: 206 QGI-FSIKSDVFSFGVLLLKIVSGK 229
++ DV+S G +L +++ G+
Sbjct: 196 GATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 31/205 (15%)
Query: 50 FSDANKLGEGGFGPVYKGVL-KNGDEIAVKRLSGRSGQGLRELKNKLRLLGCCI------ 102
++D +G G FG VY+ L +G+ +A+K++ REL+ +L C I
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYF 81
Query: 103 ------DKDEKIL--IYEYMPNKSLDFFLFDWVTRVRIIEGIAQGLLYLHQYSR------ 148
KDE L + +Y+P + + +R + + LY++Q R
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPETV--YRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 149 -VRIIHRDLKVSNILLDKDMNP-KISDFGIAR-ICRGNELQANTGRIVGTYRYMSPEYAI 205
I HRD+K N+LLD D K+ DFG A+ + RG + N I Y Y +PE
Sbjct: 140 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG---EPNVSXICSRY-YRAPELIF 195
Query: 206 QGI-FSIKSDVFSFGVLLLKIVSGK 229
++ DV+S G +L +++ G+
Sbjct: 196 GATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 62/128 (48%), Gaps = 11/128 (8%)
Query: 131 RIIEGIAQGLLYLHQYSRVRIIHRDLKVSNIL---LDKDMNPKISDFGIARICRGNELQA 187
R+I + + YLH + I+HRDLK N+L LD+D ISDFG++++ + +
Sbjct: 120 RLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLS 176
Query: 188 NTGRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGKKTTGFYRTYSFTLLGYIS 247
GT Y++PE Q +S D +S GV+ ++ G FY L I
Sbjct: 177 TA---CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG--YPPFYDENDAKLFEQIL 231
Query: 248 ENIYEFPS 255
+ YEF S
Sbjct: 232 KAEYEFDS 239
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 62/128 (48%), Gaps = 11/128 (8%)
Query: 131 RIIEGIAQGLLYLHQYSRVRIIHRDLKVSNIL---LDKDMNPKISDFGIARICRGNELQA 187
R+I + + YLH + I+HRDLK N+L LD+D ISDFG++++ + +
Sbjct: 120 RLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLS 176
Query: 188 NTGRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGKKTTGFYRTYSFTLLGYIS 247
GT Y++PE Q +S D +S GV+ ++ G FY L I
Sbjct: 177 TA---CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG--YPPFYDENDAKLFEQIL 231
Query: 248 ENIYEFPS 255
+ YEF S
Sbjct: 232 KAEYEFDS 239
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 92/211 (43%), Gaps = 29/211 (13%)
Query: 42 SVSTATNKFSDANKLGEGGFGPV---YKGVLKNGDEIAVKRLSGRSGQGLRELKNKLR-- 96
S T ++ + +G G G V Y VL +A+K+LS R Q K R
Sbjct: 12 STFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLS-RPFQNQTHAKRAYREL 68
Query: 97 -LLGCCIDKDEKILIYEYMPNKSLDFF--------LFD----WVTRVRIIEGIAQGLLY- 142
L+ C K+ L+ + P K+L+ F L D V ++ + LLY
Sbjct: 69 VLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQ 128
Query: 143 ----LHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRY 198
+ IIHRDLK SNI++ D KI DFG+AR + + T +V Y Y
Sbjct: 129 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM--TPYVVTRY-Y 185
Query: 199 MSPEYAIQGIFSIKSDVFSFGVLLLKIVSGK 229
+PE + + D++S G ++ ++V K
Sbjct: 186 RAPEVILGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 31/205 (15%)
Query: 50 FSDANKLGEGGFGPVYKGVL-KNGDEIAVKRLSGRSGQGLRELKNKLRLLGCCI------ 102
++D +G G FG VY+ L +G+ +A+K++ REL+ +L C I
Sbjct: 30 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYF 89
Query: 103 ------DKDEKIL--IYEYMPNKSLDFFLFDWVTRVRIIEGIAQGLLYLHQYSR------ 148
KDE L + +Y+P + + +R + + LY++Q R
Sbjct: 90 FYSSGEKKDEVYLNLVLDYVPETV--YRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 147
Query: 149 -VRIIHRDLKVSNILLDKDMNP-KISDFGIAR-ICRGNELQANTGRIVGTYRYMSPEYAI 205
I HRD+K N+LLD D K+ DFG A+ + RG + N I Y Y +PE
Sbjct: 148 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG---EPNVSXICSRY-YRAPELIF 203
Query: 206 QGI-FSIKSDVFSFGVLLLKIVSGK 229
++ DV+S G +L +++ G+
Sbjct: 204 GATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 92/211 (43%), Gaps = 29/211 (13%)
Query: 42 SVSTATNKFSDANKLGEGGFGPV---YKGVLKNGDEIAVKRLSGRSGQGLRELKNKLR-- 96
S T ++ + +G G G V Y VL +A+K+LS R Q K R
Sbjct: 11 STFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLS-RPFQNQTHAKRAYREL 67
Query: 97 -LLGCCIDKDEKILIYEYMPNKSLDFF--------LFD----WVTRVRIIEGIAQGLLY- 142
L+ C K+ L+ + P K+L+ F L D V ++ + LLY
Sbjct: 68 VLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQ 127
Query: 143 ----LHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRY 198
+ IIHRDLK SNI++ D KI DFG+AR + + T +V Y Y
Sbjct: 128 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM--TPYVVTRY-Y 184
Query: 199 MSPEYAIQGIFSIKSDVFSFGVLLLKIVSGK 229
+PE + + D++S G ++ ++V K
Sbjct: 185 RAPEVILGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 92/211 (43%), Gaps = 29/211 (13%)
Query: 42 SVSTATNKFSDANKLGEGGFGPV---YKGVLKNGDEIAVKRLSGRSGQGLRELKNKLR-- 96
S T ++ + +G G G V Y VL +A+K+LS R Q K R
Sbjct: 19 STFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLS-RPFQNQTHAKRAYREL 75
Query: 97 -LLGCCIDKDEKILIYEYMPNKSLDFF--------LFD----WVTRVRIIEGIAQGLLY- 142
L+ C K+ L+ + P K+L+ F L D V ++ + LLY
Sbjct: 76 VLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQ 135
Query: 143 ----LHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRY 198
+ IIHRDLK SNI++ D KI DFG+AR + + T +V Y Y
Sbjct: 136 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM--TPYVVTRY-Y 192
Query: 199 MSPEYAIQGIFSIKSDVFSFGVLLLKIVSGK 229
+PE + + D++S G ++ ++V K
Sbjct: 193 RAPEVILGMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 31/205 (15%)
Query: 50 FSDANKLGEGGFGPVYKGVL-KNGDEIAVKRLSGRSGQGLRELKNKLRLLGCCI------ 102
++D +G G FG VY+ L +G+ +A+K++ REL+ +L C I
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYF 86
Query: 103 ------DKDEKIL--IYEYMPNKSLDFFLFDWVTRVRIIEGIAQGLLYLHQYSR------ 148
KDE L + +Y+P + + +R + + LY++Q R
Sbjct: 87 FYSSGEKKDEVYLNLVLDYVPETV--YRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 144
Query: 149 -VRIIHRDLKVSNILLDKDMNP-KISDFGIAR-ICRGNELQANTGRIVGTYRYMSPEYAI 205
I HRD+K N+LLD D K+ DFG A+ + RG + N I Y Y +PE
Sbjct: 145 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG---EPNVSYICSRY-YRAPELIF 200
Query: 206 QGI-FSIKSDVFSFGVLLLKIVSGK 229
++ DV+S G +L +++ G+
Sbjct: 201 GATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 62/128 (48%), Gaps = 11/128 (8%)
Query: 131 RIIEGIAQGLLYLHQYSRVRIIHRDLKVSNIL---LDKDMNPKISDFGIARICRGNELQA 187
R+I + + YLH + I+HRDLK N+L LD+D ISDFG++++ + +
Sbjct: 120 RLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLS 176
Query: 188 NTGRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGKKTTGFYRTYSFTLLGYIS 247
GT Y++PE Q +S D +S GV+ ++ G FY L I
Sbjct: 177 TA---CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG--YPPFYDENDAKLFEQIL 231
Query: 248 ENIYEFPS 255
+ YEF S
Sbjct: 232 KAEYEFDS 239
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 31/205 (15%)
Query: 50 FSDANKLGEGGFGPVYKGVL-KNGDEIAVKRLSGRSGQGLRELKNKLRLLGCCI------ 102
++D +G G FG VY+ L +G+ +A+K++ REL+ +L C I
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYF 115
Query: 103 ------DKDEKIL--IYEYMPNKSLDFFLFDWVTRVRIIEGIAQGLLYLHQYSR------ 148
KDE L + +Y+P + + +R + + LY++Q R
Sbjct: 116 FYSSGEKKDEVYLNLVLDYVPETV--YRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 173
Query: 149 -VRIIHRDLKVSNILLDKDMNP-KISDFGIAR-ICRGNELQANTGRIVGTYRYMSPEYAI 205
I HRD+K N+LLD D K+ DFG A+ + RG + N I Y Y +PE
Sbjct: 174 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG---EPNVSXICSRY-YRAPELIF 229
Query: 206 QGI-FSIKSDVFSFGVLLLKIVSGK 229
++ DV+S G +L +++ G+
Sbjct: 230 GATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 98/207 (47%), Gaps = 33/207 (15%)
Query: 47 TNKFSDANKLGEGGFGPVYKGVLK-NGDEIAVKRL-------SGRSGQGLRELK------ 92
++++ KLG G +G V K G E A+K + + SG L E+
Sbjct: 20 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 79
Query: 93 --NKLRLLGCCIDKDEKILIYE-YMPNKSLDFFL----FDWVTRVRIIEGIAQGLLYLHQ 145
N ++L DK L+ E Y + D + F V I++ + G YLH+
Sbjct: 80 HPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHK 139
Query: 146 YSRVRIIHRDLKVSNILLD---KDMNPKISDFGI-ARICRGNELQANTGRIVGTYRYMSP 201
++ I+HRDLK N+LL+ +D KI DFG+ A G +++ +GT Y++P
Sbjct: 140 HN---IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKER----LGTAYYIAP 192
Query: 202 EYAIQGIFSIKSDVFSFGVLLLKIVSG 228
E ++ + K DV+S GV+L ++ G
Sbjct: 193 E-VLRKKYDEKCDVWSCGVILYILLCG 218
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 90/214 (42%), Gaps = 35/214 (16%)
Query: 42 SVSTATNKFSDANKLGEGGFGPV---YKGVLKNGDEIAVKRLSGRSGQGLRELKNKLR-- 96
S T ++ + +G G G V Y +L+ +A+K+LS R Q K R
Sbjct: 18 STFTVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLS-RPFQNQTHAKRAYREL 74
Query: 97 -LLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTRVRIIEGIAQ----------------- 138
L+ C K+ L+ + P KSL+ F ++ + + Q
Sbjct: 75 VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQ 134
Query: 139 ---GLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGT 195
G+ +LH IIHRDLK SNI++ D KI DFG+AR G +
Sbjct: 135 MLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMMEPEVVTRY 190
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGK 229
YR +PE + + D++S G ++ ++V K
Sbjct: 191 YR--APEVILGMGYKENVDLWSVGCIMGEMVCHK 222
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 31/205 (15%)
Query: 50 FSDANKLGEGGFGPVYKGVL-KNGDEIAVKRLSGRSGQGLRELKNKLRLLGCCI------ 102
++D +G G FG VY+ L +G+ +A+K++ REL+ +L C I
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYF 93
Query: 103 ------DKDEKIL--IYEYMPNKSLDFFLFDWVTRVRIIEGIAQGLLYLHQYSR------ 148
KDE L + +Y+P + + +R + + LY++Q R
Sbjct: 94 FYSSGEKKDEVYLNLVLDYVPETV--YRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 151
Query: 149 -VRIIHRDLKVSNILLDKDMNP-KISDFGIAR-ICRGNELQANTGRIVGTYRYMSPEYAI 205
I HRD+K N+LLD D K+ DFG A+ + RG + N I Y Y +PE
Sbjct: 152 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG---EPNVSXICSRY-YRAPELIF 207
Query: 206 QGI-FSIKSDVFSFGVLLLKIVSGK 229
++ DV+S G +L +++ G+
Sbjct: 208 GATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 31/205 (15%)
Query: 50 FSDANKLGEGGFGPVYKGVL-KNGDEIAVKRLSGRSGQGLRELKNKLRLLGCCI------ 102
++D +G G FG VY+ L +G+ +A+K++ REL+ +L C I
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYF 93
Query: 103 ------DKDEKIL--IYEYMPNKSLDFFLFDWVTRVRIIEGIAQGLLYLHQYSR------ 148
KDE L + +Y+P + + +R + + LY++Q R
Sbjct: 94 FYSSGEKKDEVYLNLVLDYVPETV--YRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 151
Query: 149 -VRIIHRDLKVSNILLDKDMNP-KISDFGIAR-ICRGNELQANTGRIVGTYRYMSPEYAI 205
I HRD+K N+LLD D K+ DFG A+ + RG + N I Y Y +PE
Sbjct: 152 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG---EPNVSXICSRY-YRAPELIF 207
Query: 206 QGI-FSIKSDVFSFGVLLLKIVSGK 229
++ DV+S G +L +++ G+
Sbjct: 208 GATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 57/126 (45%), Gaps = 25/126 (19%)
Query: 123 LFDWVTR------------VRIIEGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPK 170
L DW+ R + I IA+ + +LH ++HRDLK SNI D K
Sbjct: 148 LKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVK 204
Query: 171 ISDFGIARICRGNELQ----------ANTGRIVGTYRYMSPEYAIQGIFSIKSDVFSFGV 220
+ DFG+ +E + A VGT YMSPE +S K D+FS G+
Sbjct: 205 VGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGL 264
Query: 221 LLLKIV 226
+L +++
Sbjct: 265 ILFELL 270
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 92/211 (43%), Gaps = 29/211 (13%)
Query: 42 SVSTATNKFSDANKLGEGGFGPV---YKGVLKNGDEIAVKRLSGRSGQGLRELKNKLR-- 96
S T ++ + +G G G V Y VL +A+K+LS R Q K R
Sbjct: 12 STFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLS-RPFQNQTHAKRAYREL 68
Query: 97 -LLGCCIDKDEKILIYEYMPNKSLDFF--------LFD----WVTRVRIIEGIAQGLLY- 142
L+ C K+ L+ + P K+L+ F L D V ++ + LLY
Sbjct: 69 VLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQ 128
Query: 143 ----LHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRY 198
+ IIHRDLK SNI++ D KI DFG+AR + + T +V Y Y
Sbjct: 129 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM--TPYVVTRY-Y 185
Query: 199 MSPEYAIQGIFSIKSDVFSFGVLLLKIVSGK 229
+PE + + D++S G ++ ++V K
Sbjct: 186 RAPEVILGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 31/205 (15%)
Query: 50 FSDANKLGEGGFGPVYKGVL-KNGDEIAVKRLSGRSGQGLRELKNKLRLLGCCI------ 102
++D +G G FG VY+ L +G+ +A+K++ REL+ +L C I
Sbjct: 50 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYF 109
Query: 103 ------DKDEKIL--IYEYMPNKSLDFFLFDWVTRVRIIEGIAQGLLYLHQYSR------ 148
KDE L + +Y+P + + +R + + LY++Q R
Sbjct: 110 FYSSGEKKDEVYLNLVLDYVPETV--YRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 167
Query: 149 -VRIIHRDLKVSNILLDKDMNP-KISDFGIAR-ICRGNELQANTGRIVGTYRYMSPEYAI 205
I HRD+K N+LLD D K+ DFG A+ + RG + N I Y Y +PE
Sbjct: 168 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG---EPNVSYICSRY-YRAPELIF 223
Query: 206 QGI-FSIKSDVFSFGVLLLKIVSGK 229
++ DV+S G +L +++ G+
Sbjct: 224 GATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 11/127 (8%)
Query: 132 IIEGIAQGLLYLHQYSRVRIIHRDLKVSNILL---DKDMNPKISDFGIARICRGNELQAN 188
+I + + YLH R+ I+HRDLK N+L D++ ISDFG++++ ++ +
Sbjct: 125 LIRQVLDAVYYLH---RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMST 181
Query: 189 TGRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGKKTTGFYRTYSFTLLGYISE 248
GT Y++PE Q +S D +S GV+ ++ G FY L I +
Sbjct: 182 A---CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG--YPPFYDENDSKLFEQILK 236
Query: 249 NIYEFPS 255
YEF S
Sbjct: 237 AEYEFDS 243
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 103/225 (45%), Gaps = 33/225 (14%)
Query: 27 SKKKEVDQLPLFSFSSVSTAT-NKFSDANKLGEGGFGPVYKGVLK-NGDEIAVKRLSGRS 84
+K KE D L + S +TA ++F LG G FG V K +G+ A+K L +
Sbjct: 20 AKAKE-DFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK 78
Query: 85 GQGLRELK---NKLRLLGCC------------IDKDEKILIYEYMPNKSLDFFLFDWVTR 129
L++++ N+ R+L D ++ EY+ + F + R
Sbjct: 79 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRR 134
Query: 130 V-RIIEG-----IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGN 183
+ R E AQ +L + +I+RDLK N+L+D+ +++DFG A+ +G
Sbjct: 135 IGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG- 193
Query: 184 ELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
T + GT Y++PE + ++ D ++ GVL+ ++ +G
Sbjct: 194 ----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 142 YLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSP 201
YLH + +I+RDLK N+L+D+ +++DFG A+ +G T + GT Y++P
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAP 207
Query: 202 EYAIQGIFSIKSDVFSFGVLLLKIVSG 228
E + ++ D ++ GVL+ ++ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYQMAAG 234
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 56/103 (54%), Gaps = 12/103 (11%)
Query: 130 VRIIEGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNP----KISDFGIARICRGNEL 185
+++ + L Y H ++H+DLK NIL +D +P KI DFG+A + + +E
Sbjct: 127 AELMKQMMNALAYFHSQ---HVVHKDLKPENILF-QDTSPHSPIKIIDFGLAELFKSDEH 182
Query: 186 QANTGRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
N GT YM+PE + + + K D++S GV++ +++G
Sbjct: 183 STNAA---GTALYMAPEVFKRDV-TFKCDIWSAGVVMYFLLTG 221
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 103/225 (45%), Gaps = 33/225 (14%)
Query: 27 SKKKEVDQLPLFSFSSVSTAT-NKFSDANKLGEGGFGPVYKGVLK-NGDEIAVKRLSGRS 84
+K KE D L + S +TA ++F LG G FG V K +G+ A+K L +
Sbjct: 15 AKAKE-DFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK 73
Query: 85 GQGLRELK---NKLRLLGCC------------IDKDEKILIYEYMPNKSLDFFLFDWVTR 129
L++++ N+ R+L D ++ EY+ + F + R
Sbjct: 74 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRR 129
Query: 130 V-RIIEG-----IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGN 183
+ R E AQ +L + +I+RDLK N+L+D+ +++DFG A+ +G
Sbjct: 130 IGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG- 188
Query: 184 ELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
T + GT Y++PE + ++ D ++ GVL+ ++ +G
Sbjct: 189 ----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 229
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 142 YLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSP 201
YLH + +I+RDLK N+L+D+ +++DFG A+ +G T + GT Y++P
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAP 207
Query: 202 EYAIQGIFSIKSDVFSFGVLLLKIVSG 228
E + ++ D ++ GVL+ ++ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 31/205 (15%)
Query: 50 FSDANKLGEGGFGPVYKGVL-KNGDEIAVKRLSGRSGQGLRELKNKLRLLGCCI------ 102
++D +G G FG VY+ L +G+ +A+K++ REL+ +L C I
Sbjct: 35 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYF 94
Query: 103 ------DKDEKIL--IYEYMPNKSLDFFLFDWVTRVRIIEGIAQGLLYLHQYSR------ 148
KDE L + +Y+P + + +R + + LY++Q R
Sbjct: 95 FYSSGEKKDEVYLNLVLDYVPETV--YRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 152
Query: 149 -VRIIHRDLKVSNILLDKDMNP-KISDFGIAR-ICRGNELQANTGRIVGTYRYMSPEYAI 205
I HRD+K N+LLD D K+ DFG A+ + RG + N I Y Y +PE
Sbjct: 153 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG---EPNVSYICSRY-YRAPELIF 208
Query: 206 QGI-FSIKSDVFSFGVLLLKIVSGK 229
++ DV+S G +L +++ G+
Sbjct: 209 GATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 96/205 (46%), Gaps = 28/205 (13%)
Query: 48 NKFSDANKLGEGGFGPVYKGVLKNGDEI-AVKRL------SGRSGQGLREL--------K 92
K+ K+GEG +G V+K + EI A+KR+ G LRE+ K
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61
Query: 93 NKLRLLGCCIDKDEKILIYEYMPNKSLDFF------LFDWVTRVRIIEGIAQGLLYLHQY 146
N +RL + L++E+ +F L + + + + + +GL + H
Sbjct: 62 NIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQ-LLKGLGFCHSR 120
Query: 147 SRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQ 206
+ ++HRDLK N+L++++ K++DFG+AR G ++ + +V T Y P+
Sbjct: 121 N---VLHRDLKPQNLLINRNGELKLADFGLAR-AFGIPVRCYSAEVV-TLWYRPPDVLFG 175
Query: 207 G-IFSIKSDVFSFGVLLLKIVSGKK 230
++S D++S G + ++ + +
Sbjct: 176 AKLYSTSIDMWSAGCIFAELANAAR 200
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 142 YLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSP 201
YLH + +I+RDLK N+L+D+ +++DFG A+ +G T + GT Y++P
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLXGTPEYLAP 207
Query: 202 EYAIQGIFSIKSDVFSFGVLLLKIVSG 228
E + ++ D ++ GVL+ ++ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 31/205 (15%)
Query: 50 FSDANKLGEGGFGPVYKGVL-KNGDEIAVKRLSGRSGQGLRELKNKLRLLGCCI------ 102
++D +G G FG VY+ L +G+ +A+K++ REL+ +L C I
Sbjct: 26 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYF 85
Query: 103 ------DKDEKIL--IYEYMPNKSLDFFLFDWVTRVRIIEGIAQGLLYLHQYSR------ 148
KDE L + +Y+P + + +R + + LY++Q R
Sbjct: 86 FYSSGEKKDEVYLNLVLDYVPETV--YRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 143
Query: 149 -VRIIHRDLKVSNILLDKDMNP-KISDFGIAR-ICRGNELQANTGRIVGTYRYMSPEYAI 205
I HRD+K N+LLD D K+ DFG A+ + RG + N I Y Y +PE
Sbjct: 144 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG---EPNVSXICSRY-YRAPELIF 199
Query: 206 QGI-FSIKSDVFSFGVLLLKIVSGK 229
++ DV+S G +L +++ G+
Sbjct: 200 GATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 7/94 (7%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGN-ELQANTGRIVG 194
IA L YLH + I++RDLK NILLD + ++DFG +C+ N E + T G
Sbjct: 148 IASALGYLHS---LNIVYRDLKPENILLDSQGHIVLTDFG---LCKENIEHNSTTSTFCG 201
Query: 195 TYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
T Y++PE + + D + G +L +++ G
Sbjct: 202 TPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYG 235
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 103/225 (45%), Gaps = 33/225 (14%)
Query: 27 SKKKEVDQLPLFSFSSVSTAT-NKFSDANKLGEGGFGPVYKGVLK-NGDEIAVKRLSGRS 84
+K KE D L + S +TA ++F LG G FG V K +G+ A+K L +
Sbjct: 20 AKAKE-DFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK 78
Query: 85 GQGLRELK---NKLRLLGCC------------IDKDEKILIYEYMPNKSLDFFLFDWVTR 129
L++++ N+ R+L D ++ EY+ + F + R
Sbjct: 79 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRR 134
Query: 130 V-RIIEG-----IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGN 183
+ R E AQ +L + +I+RDLK N+L+D+ +++DFG A+ +G
Sbjct: 135 IGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG- 193
Query: 184 ELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
T + GT Y++PE + ++ D ++ GVL+ ++ +G
Sbjct: 194 ----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 31/205 (15%)
Query: 50 FSDANKLGEGGFGPVYKGVL-KNGDEIAVKRLSGRSGQGLRELKNKLRLLGCCI------ 102
++D +G G FG VY+ L +G+ +A+K++ REL+ +L C I
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYF 81
Query: 103 ------DKDEKIL--IYEYMPNKSLDFFLFDWVTRVRIIEGIAQGLLYLHQYSR------ 148
KDE L + +Y+P + + +R + + LY++Q R
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPETV--YRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 149 -VRIIHRDLKVSNILLDKDMNP-KISDFGIAR-ICRGNELQANTGRIVGTYRYMSPEYAI 205
I HRD+K N+LLD D K+ DFG A+ + RG + N I Y Y +PE
Sbjct: 140 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG---EPNVSYICSRY-YRAPELIF 195
Query: 206 QGI-FSIKSDVFSFGVLLLKIVSGK 229
++ DV+S G +L +++ G+
Sbjct: 196 GATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 103/225 (45%), Gaps = 33/225 (14%)
Query: 27 SKKKEVDQLPLFSFSSVSTAT-NKFSDANKLGEGGFGPVYKGVLK-NGDEIAVKRLSGRS 84
+K KE D L + S +TA ++F LG G FG V K +G+ A+K L +
Sbjct: 20 AKAKE-DFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK 78
Query: 85 GQGLRELK---NKLRLLGCC------------IDKDEKILIYEYMPNKSLDFFLFDWVTR 129
L++++ N+ R+L D ++ EY+ + F + R
Sbjct: 79 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRR 134
Query: 130 V-RIIEG-----IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGN 183
+ R E AQ +L + +I+RDLK N+L+D+ +++DFG A+ +G
Sbjct: 135 IGRFAEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG- 193
Query: 184 ELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
T + GT Y++PE + ++ D ++ GVL+ ++ +G
Sbjct: 194 ----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 142 YLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSP 201
YLH + +I+RDLK N+L+D+ +++DFG A+ +G T + GT Y++P
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAP 207
Query: 202 EYAIQGIFSIKSDVFSFGVLLLKIVSG 228
E + ++ D ++ GVL+ ++ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 142 YLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSP 201
YLH + +I+RDLK N+L+D+ +++DFG A+ +G T + GT Y++P
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAP 207
Query: 202 EYAIQGIFSIKSDVFSFGVLLLKIVSG 228
E + ++ D ++ GVL+ ++ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 142 YLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSP 201
YLH + +I+RDLK N+L+D+ +++DFG A+ +G T + GT Y++P
Sbjct: 157 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAP 208
Query: 202 EYAIQGIFSIKSDVFSFGVLLLKIVSG 228
E + ++ D ++ GVL+ ++ +G
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 142 YLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSP 201
YLH + +I+RDLK N+++D+ +++DFG A+ +G T + GT Y++P
Sbjct: 156 YLHS---LDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAP 207
Query: 202 EYAIQGIFSIKSDVFSFGVLLLKIVSG 228
E I ++ D ++ GVL+ ++ +G
Sbjct: 208 EIIISKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 142 YLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSP 201
YLH + +I+RDLK N+L+D+ +++DFG A+ +G T + GT Y++P
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAP 207
Query: 202 EYAIQGIFSIKSDVFSFGVLLLKIVSG 228
E + ++ D ++ GVL+ ++ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 142 YLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSP 201
YLH + +I+RDLK N+L+D+ +++DFG A+ +G T + GT Y++P
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAP 207
Query: 202 EYAIQGIFSIKSDVFSFGVLLLKIVSG 228
E + ++ D ++ GVL+ ++ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 142 YLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSP 201
YLH + +I+RDLK N+L+D+ +++DFG A+ +G T + GT Y++P
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAP 207
Query: 202 EYAIQGIFSIKSDVFSFGVLLLKIVSG 228
E + ++ D ++ GVL+ ++ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 142 YLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSP 201
YLH + +I+RDLK N+L+D+ +++DFG A+ +G T + GT Y++P
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAP 207
Query: 202 EYAIQGIFSIKSDVFSFGVLLLKIVSG 228
E + ++ D ++ GVL+ ++ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 142 YLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSP 201
YLH + +I+RDLK N+L+D+ +++DFG A+ +G T + GT Y++P
Sbjct: 177 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAP 228
Query: 202 EYAIQGIFSIKSDVFSFGVLLLKIVSG 228
E + ++ D ++ GVL+ ++ +G
Sbjct: 229 EIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 96/222 (43%), Gaps = 27/222 (12%)
Query: 26 RSKKKEVDQLPLFSFSSVSTA-TNKFSDANKLGEGGFGPVYKGVLK-NGDEIAVKRLSGR 83
R + E Q P + S + F ++LG G +G V+K K +G AVKR S
Sbjct: 34 RGEASETLQSPGYDPSRPESFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKR-SMS 92
Query: 84 SGQGLRELKNKLRLLG---------CCIDKDEK------ILIYEYMPNKSLDFFLFDW-- 126
+G ++ KL +G CC+ ++ + + + SL W
Sbjct: 93 PFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTELCGPSLQQHCEAWGA 152
Query: 127 -VTRVRIIEGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNEL 185
+ ++ + LL L ++H D+K +NI L K+ DFG+ + G
Sbjct: 153 SLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLL-VELGT-- 209
Query: 186 QANTGRIV-GTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIV 226
A G + G RYM+PE +QG + +DVFS G+ +L++
Sbjct: 210 -AGAGEVQEGDPRYMAPEL-LQGSYGTAADVFSLGLTILEVA 249
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 91/205 (44%), Gaps = 31/205 (15%)
Query: 50 FSDANKLGEGGFGPVYKGVLKNGDEIAV-------KRLSGRSGQGLRELK--NKLRLLGC 100
++D +G G FG VY+ L + E+ KR R Q +R+L N +RL
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYF 81
Query: 101 CIDKDEKI------LIYEYMPNKSLDFFLFDWVTRVRIIEGIAQGLLYLHQYSR------ 148
EK L+ +Y+P + + +R + + LY++Q R
Sbjct: 82 FYSSGEKKDVVYLNLVLDYVPETV--YRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 149 -VRIIHRDLKVSNILLDKDMNP-KISDFGIAR-ICRGNELQANTGRIVGTYRYMSPEYAI 205
I HRD+K N+LLD D K+ DFG A+ + RG + N I Y Y +PE
Sbjct: 140 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG---EPNVSXICSRY-YRAPELIF 195
Query: 206 QGI-FSIKSDVFSFGVLLLKIVSGK 229
++ DV+S G +L +++ G+
Sbjct: 196 GATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 95/198 (47%), Gaps = 32/198 (16%)
Query: 56 LGEGGFGPVYKGVLK-NGDEIAVKRLSG--RSGQGLRELKNKLRLLGCCIDKDEKILIYE 112
+G G +G V + K +G+++A+K+LS +S + +L LL ++ L+
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 91
Query: 113 YMPNKSL----DFFL----------------FDWVTRVRIIEGIAQGLLYLHQYSRVRII 152
+ P SL DF+L F ++ + +GL Y+H ++
Sbjct: 92 FTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHS---AGVV 148
Query: 153 HRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGI-FSI 211
HRDLK N+ +++D KI DFG+AR TG +V T Y +PE + + ++
Sbjct: 149 HRDLKPGNLAVNEDCELKILDFGLARHADAE----MTGYVV-TRWYRAPEVILSWMHYNQ 203
Query: 212 KSDVFSFGVLLLKIVSGK 229
D++S G ++ ++++GK
Sbjct: 204 TVDIWSVGCIMAEMLTGK 221
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 31/205 (15%)
Query: 50 FSDANKLGEGGFGPVYKGVL-KNGDEIAVKRLSGRSGQGLRELKNKLRLLGCCI------ 102
++D +G G FG VY+ L +G+ +A+K++ REL+ +L C I
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYF 115
Query: 103 ------DKDEKIL--IYEYMPNKSLDFFLFDWVTRVRIIEGIAQGLLYLHQYSR------ 148
KDE L + +Y+P + + +R + + LY++Q R
Sbjct: 116 FYSSGEKKDEVYLNLVLDYVPETV--YRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 173
Query: 149 -VRIIHRDLKVSNILLDKDMNP-KISDFGIAR-ICRGNELQANTGRIVGTYRYMSPEYAI 205
I HRD+K N+LLD D K+ DFG A+ + RG + N I Y Y +PE
Sbjct: 174 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG---EPNVSYICSRY-YRAPELIF 229
Query: 206 QGI-FSIKSDVFSFGVLLLKIVSGK 229
++ DV+S G +L +++ G+
Sbjct: 230 GATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 98/207 (47%), Gaps = 33/207 (15%)
Query: 47 TNKFSDANKLGEGGFGPVYKGVLK-NGDEIAVKRL-------SGRSGQGLRELK------ 92
++++ KLG G +G V K G E A+K + + SG L E+
Sbjct: 3 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 62
Query: 93 --NKLRLLGCCIDKDEKILIYE-YMPNKSLDFFL----FDWVTRVRIIEGIAQGLLYLHQ 145
N ++L DK L+ E Y + D + F V I++ + G YLH+
Sbjct: 63 HPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHK 122
Query: 146 YSRVRIIHRDLKVSNILLD---KDMNPKISDFGI-ARICRGNELQANTGRIVGTYRYMSP 201
++ I+HRDLK N+LL+ +D KI DFG+ A G +++ +GT Y++P
Sbjct: 123 HN---IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKER----LGTAYYIAP 175
Query: 202 EYAIQGIFSIKSDVFSFGVLLLKIVSG 228
E ++ + K DV+S GV+L ++ G
Sbjct: 176 E-VLRKKYDEKCDVWSCGVILYILLCG 201
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 96/205 (46%), Gaps = 34/205 (16%)
Query: 50 FSDANKLGEGGFGPVYKGVLK-NGDEIAVKRLSGRSGQG---LRELKNKLRLLGCCIDKD 105
+ +G G +G V + K +G+++A+K+LS R Q + +L LL ++
Sbjct: 44 YVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLS-RPFQSEIFAKRAYRELLLLKHMQHEN 102
Query: 106 EKILIYEYMPNKSL----DFFL----------------FDWVTRVRIIEGIAQGLLYLHQ 145
L+ + P SL DF+L F ++ + +GL Y+H
Sbjct: 103 VIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHS 162
Query: 146 YSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAI 205
++HRDLK N+ +++D KI DFG+AR TG +V T Y +PE +
Sbjct: 163 AG---VVHRDLKPGNLAVNEDCELKILDFGLARHADAE----MTGYVV-TRWYRAPEVIL 214
Query: 206 QGI-FSIKSDVFSFGVLLLKIVSGK 229
+ ++ D++S G ++ ++++GK
Sbjct: 215 SWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 31/205 (15%)
Query: 50 FSDANKLGEGGFGPVYKGVL-KNGDEIAVKRLSGRSGQGLRELKNKLRLLGCCI------ 102
++D +G G FG VY+ L +G+ +A+K++ REL+ +L C I
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYF 117
Query: 103 ------DKDEKIL--IYEYMPNKSLDFFLFDWVTRVRIIEGIAQGLLYLHQYSR------ 148
KDE L + +Y+P + + +R + + LY++Q R
Sbjct: 118 FYSSGEKKDEVYLNLVLDYVPETV--YRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 175
Query: 149 -VRIIHRDLKVSNILLDKDMNP-KISDFGIAR-ICRGNELQANTGRIVGTYRYMSPEYAI 205
I HRD+K N+LLD D K+ DFG A+ + RG + N I Y Y +PE
Sbjct: 176 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG---EPNVSYICSRY-YRAPELIF 231
Query: 206 QGI-FSIKSDVFSFGVLLLKIVSGK 229
++ DV+S G +L +++ G+
Sbjct: 232 GATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 54/98 (55%), Gaps = 6/98 (6%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGT 195
I + ++ L RIIHRD+K NILLD+ + I+DF IA + E Q T + GT
Sbjct: 121 ICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAML-PRETQITT--MAGT 177
Query: 196 YRYMSPEY--AIQGI-FSIKSDVFSFGVLLLKIVSGKK 230
YM+PE + +G +S D +S GV +++ G++
Sbjct: 178 KPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRR 215
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 91/208 (43%), Gaps = 39/208 (18%)
Query: 50 FSDANKLGEGGFGP-VYKGVLKNGDEIAVKRL-------SGRSGQGLRE---LKNKLRLL 98
F + LG G G VY+G+ N D +AVKR+ + R Q LRE N +R
Sbjct: 26 FCPKDVLGHGAEGTIVYRGMFDNRD-VAVKRILPECFSFADREVQLLRESDEHPNVIRYF 84
Query: 99 GCCIDKDEKI----------LIYEYMPNKSLDFFLFDWVTRVRIIEGIAQGLLYLHQYSR 148
C +KD + + EY+ K + +T +++ GL +LH
Sbjct: 85 --CTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPIT---LLQQTTSGLAHLHS--- 136
Query: 149 VRIIHRDLKVSNILLDK-----DMNPKISDFGIA-RICRGNELQANTGRIVGTYRYMSPE 202
+ I+HRDLK NIL+ + ISDFG+ ++ G + + GT +++PE
Sbjct: 137 LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPE 196
Query: 203 YAIQGIFSIKS---DVFSFGVLLLKIVS 227
+ + D+FS G + ++S
Sbjct: 197 MLSEDCKENPTYTVDIFSAGCVFYYVIS 224
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 109/248 (43%), Gaps = 36/248 (14%)
Query: 38 FSFSSVSTATNKFSDANKLGEGGFGPVYKGVLKNGDEI--AVKRLSGRSGQGLRELKNKL 95
F S+ ++ N +G G +G V K ++ G I A K++ + + K ++
Sbjct: 16 FQGSTKGDINQYYTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEI 74
Query: 96 RLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVT-----------RV-------RIIEGIA 137
++ +D I +YE + + + + + T RV RI++ +
Sbjct: 75 EIMKS-LDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVL 133
Query: 138 QGLLYLHQYSRVRIIHRDLKVSNILL--DKDMNP-KISDFGI-ARICRGNELQANTGRIV 193
+ Y H ++ + HRDLK N L D +P K+ DFG+ AR G ++ V
Sbjct: 134 SAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTK----V 186
Query: 194 GTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGKKTTGFYRTYSFTLLGYISENIYEF 253
GT Y+SP+ ++G++ + D +S GV++ ++ G F ++ I E + F
Sbjct: 187 GTPYYVSPQ-VLEGLYGPECDEWSAGVMMYVLLCG--YPPFSAPTDXEVMLKIREGTFTF 243
Query: 254 PSVDTHNV 261
P D NV
Sbjct: 244 PEKDWLNV 251
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 142 YLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSP 201
YLH + +I+RDLK N+L+D+ +++DFG A+ +G T + GT Y++P
Sbjct: 143 YLHS---LDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAP 194
Query: 202 EYAIQGIFSIKSDVFSFGVLLLKIVSG 228
E + ++ D ++ GVL+ ++ +G
Sbjct: 195 EIILSKGYNKAVDWWALGVLIYEMAAG 221
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 31/205 (15%)
Query: 50 FSDANKLGEGGFGPVYKGVL-KNGDEIAVKRLSGRSGQGLRELKNKLRLLGCCI------ 102
++D +G G FG VY+ L +G+ +A+K++ REL+ +L C I
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYF 160
Query: 103 ------DKDEKIL--IYEYMPNKSLDFFLFDWVTRVRIIEGIAQGLLYLHQYSR------ 148
KDE L + +Y+P + + +R + + LY++Q R
Sbjct: 161 FYSSGEKKDEVYLNLVLDYVPETV--YRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 218
Query: 149 -VRIIHRDLKVSNILLDKDMNP-KISDFGIAR-ICRGNELQANTGRIVGTYRYMSPEYAI 205
I HRD+K N+LLD D K+ DFG A+ + RG + N I Y Y +PE
Sbjct: 219 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG---EPNVSYICSRY-YRAPELIF 274
Query: 206 QGI-FSIKSDVFSFGVLLLKIVSGK 229
++ DV+S G +L +++ G+
Sbjct: 275 GATDYTSSIDVWSAGCVLAELLLGQ 299
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 31/205 (15%)
Query: 50 FSDANKLGEGGFGPVYKGVL-KNGDEIAVKRLSGRSGQGLRELKNKLRLLGCCI------ 102
++D +G G FG VY+ L +G+ +A+K++ REL+ +L C I
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYF 119
Query: 103 ------DKDEKIL--IYEYMPNKSLDFFLFDWVTRVRIIEGIAQGLLYLHQYSR------ 148
KDE L + +Y+P + + +R + + LY++Q R
Sbjct: 120 FYSSGEKKDEVYLNLVLDYVPETV--YRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 177
Query: 149 -VRIIHRDLKVSNILLDKDMNP-KISDFGIAR-ICRGNELQANTGRIVGTYRYMSPEYAI 205
I HRD+K N+LLD D K+ DFG A+ + RG + N I Y Y +PE
Sbjct: 178 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG---EPNVSYICSRY-YRAPELIF 233
Query: 206 QGI-FSIKSDVFSFGVLLLKIVSGK 229
++ DV+S G +L +++ G+
Sbjct: 234 GATDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 142 YLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSP 201
YLH + +I+RDLK N+L+D+ +++DFG A+ +G T + GT Y++P
Sbjct: 177 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----ATWTLCGTPEYLAP 228
Query: 202 EYAIQGIFSIKSDVFSFGVLLLKIVSG 228
E + ++ D ++ GVL+ ++ +G
Sbjct: 229 EIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 104/232 (44%), Gaps = 36/232 (15%)
Query: 54 NKLGEGGFGPVYKGVLKNGDEI--AVKRLSGRSGQGLRELKNKLRLLGCCIDKDEKILIY 111
N +G G +G V K ++ G I A K++ + + K ++ ++ +D I +Y
Sbjct: 15 NTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKS-LDHPNIIRLY 72
Query: 112 EYMPNKSLDFFLFDWVT-----------RV-------RIIEGIAQGLLYLHQYSRVRIIH 153
E + + + + + T RV RI++ + + Y H ++ + H
Sbjct: 73 ETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCH---KLNVAH 129
Query: 154 RDLKVSNILL--DKDMNP-KISDFGI-ARICRGNELQANTGRIVGTYRYMSPEYAIQGIF 209
RDLK N L D +P K+ DFG+ AR G ++ VGT Y+SP+ ++G++
Sbjct: 130 RDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTK----VGTPYYVSPQ-VLEGLY 184
Query: 210 SIKSDVFSFGVLLLKIVSGKKTTGFYRTYSFTLLGYISENIYEFPSVDTHNV 261
+ D +S GV++ ++ G F ++ I E + FP D NV
Sbjct: 185 GPECDEWSAGVMMYVLLCG--YPPFSAPTDXEVMLKIREGTFTFPEKDWLNV 234
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 90/204 (44%), Gaps = 30/204 (14%)
Query: 50 FSDANKLGEGGFGPVYKGVLKNGDEIAV------KRLSGRSGQGLRELKN------KLRL 97
+++ +G G FG V++ L DE+A+ KR R Q +R +K+ K
Sbjct: 42 YTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNRELQIMRIVKHPNVVDLKAFF 101
Query: 98 LGCCIDKDEKI--LIYEYMPN----KSLDFFLFDWVTRVRIIE----GIAQGLLYLHQYS 147
KDE L+ EY+P S + + +I+ + + L Y+H
Sbjct: 102 YSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHS-- 159
Query: 148 RVRIIHRDLKVSNILLDKDMNP-KISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQ 206
+ I HRD+K N+LLD K+ DFG A+I E N I Y Y +PE
Sbjct: 160 -IGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGE--PNVSXICSRY-YRAPELIFG 215
Query: 207 GI-FSIKSDVFSFGVLLLKIVSGK 229
++ D++S G ++ +++ G+
Sbjct: 216 ATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 85/205 (41%), Gaps = 34/205 (16%)
Query: 48 NKFSDANKLGEGGFGPVYKGVLKNGDEI-AVKRL-------SGRSGQGLRELK------- 92
+ F LG+G FG VY K I A+K L G Q RE++
Sbjct: 15 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 74
Query: 93 -NKLRLLGCCIDKDEKILIYEYMPNKSLDFFL-----FDWVTRVRIIEGIAQGLLYLHQY 146
N LR+ D+ L+ E+ P L L FD +E +A L Y H+
Sbjct: 75 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHER 134
Query: 147 SRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGR---IVGTYRYMSPEY 203
++IHRD+K N+L+ KI+DFG + + A + R + GT Y+ PE
Sbjct: 135 ---KVIHRDIKPENLLMGYKGELKIADFGWS-------VHAPSLRRRXMCGTLDYLPPEM 184
Query: 204 AIQGIFSIKSDVFSFGVLLLKIVSG 228
K D++ GVL + + G
Sbjct: 185 IEGKTHDEKVDLWCAGVLCYEFLVG 209
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 85/205 (41%), Gaps = 34/205 (16%)
Query: 48 NKFSDANKLGEGGFGPVYKGVLKNGDEI-AVKRL-------SGRSGQGLRELK------- 92
+ F LG+G FG VY K I A+K L G Q RE++
Sbjct: 14 DDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 93 -NKLRLLGCCIDKDEKILIYEYMPNKSLDFFL-----FDWVTRVRIIEGIAQGLLYLHQY 146
N LR+ D+ L+ E+ P L L FD +E +A L Y H+
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHER 133
Query: 147 SRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGR---IVGTYRYMSPEY 203
++IHRD+K N+L+ KI+DFG + + A + R + GT Y+ PE
Sbjct: 134 ---KVIHRDIKPENLLMGYKGELKIADFGWS-------VHAPSLRRRXMCGTLDYLPPEM 183
Query: 204 AIQGIFSIKSDVFSFGVLLLKIVSG 228
K D++ GVL + + G
Sbjct: 184 IEGKTHDEKVDLWCAGVLCYEFLVG 208
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 92/197 (46%), Gaps = 34/197 (17%)
Query: 56 LGEGGFGPVYKGVLKNGDE----IAVKRLSGRSGQGLRE--LKNKL-----------RLL 98
+GEG FG V++G+ + + +A+K + +RE L+ L +L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 99 GCCIDKDEKILIYEYMPNKSLDFFLFDWVTRVRIIE-GIAQGLLYLHQYSRV-------R 150
G I ++ +I E L FL +VR +A +LY +Q S R
Sbjct: 78 GV-ITENPVWIIMELCTLGELRSFL-----QVRKFSLDLASLILYAYQLSTALAYLESKR 131
Query: 151 IIHRDLKVSNILLDKDMNPKISDFGIARICR-GNELQANTGRIVGTYRYMSPEYAIQGIF 209
+HRD+ N+L+ + K+ DFG++R +A+ G++ ++M+PE F
Sbjct: 132 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKL--PIKWMAPESINFRRF 189
Query: 210 SIKSDVFSFGVLLLKIV 226
+ SDV+ FGV + +I+
Sbjct: 190 TSASDVWMFGVCMWEIL 206
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 85/205 (41%), Gaps = 34/205 (16%)
Query: 48 NKFSDANKLGEGGFGPVYKGVLKNGDEI-AVKRL-------SGRSGQGLRELK------- 92
+ F LG+G FG VY K I A+K L G Q RE++
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 93 -NKLRLLGCCIDKDEKILIYEYMPNKSLDFFL-----FDWVTRVRIIEGIAQGLLYLHQY 146
N LR+ D+ L+ E+ P L L FD +E +A L Y H+
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHER 133
Query: 147 SRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGR---IVGTYRYMSPEY 203
++IHRD+K N+L+ KI+DFG + + A + R + GT Y+ PE
Sbjct: 134 ---KVIHRDIKPENLLMGYKGELKIADFGWS-------VHAPSLRRRXMCGTLDYLPPEM 183
Query: 204 AIQGIFSIKSDVFSFGVLLLKIVSG 228
K D++ GVL + + G
Sbjct: 184 IEGKTHDEKVDLWCAGVLCYEFLVG 208
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 98/227 (43%), Gaps = 47/227 (20%)
Query: 40 FSSVSTATNKFSDANKLGEGGFGPVYKGVLKNGDEIAVK--RLSGRSGQGLRELKNKLRL 97
F S+S +S ++G GG V++ + + A+K L Q L +N++
Sbjct: 20 FQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAY 79
Query: 98 LGCCIDKDEKIL---------IYEYMPNKSLDFFLFDWVTRVRIIE---------GIAQG 139
L +KI+ Y YM + + L W+ + + I+ + +
Sbjct: 80 LNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEA 139
Query: 140 LLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIV-----G 194
+ +HQ+ I+H DLK +N L+ M K+ DFGIA N++Q +T +V G
Sbjct: 140 VHTIHQHG---IVHSDLKPANFLIVDGM-LKLIDFGIA-----NQMQPDTTSVVKDSQVG 190
Query: 195 TYRYMSPEYAIQGIFSIKS------------DVFSFGVLLLKIVSGK 229
T YM PE AI+ + S + DV+S G +L + GK
Sbjct: 191 TVNYMPPE-AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 236
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 93/213 (43%), Gaps = 35/213 (16%)
Query: 42 SVSTATNKFSDANKLGEGGFGPV---YKGVLKNGDEIAVKRLSGRSGQGLRELKNKLR-- 96
S T ++ + +G G G V Y +L+ +A+K+LS R Q K R
Sbjct: 18 STFTVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLS-RPFQNQTHAKRAYREL 74
Query: 97 -LLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTRVRIIEGIAQ----------------- 138
L+ K+ L+ + P KSL+ F ++ + ++Q
Sbjct: 75 VLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQ 134
Query: 139 ---GLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGT 195
G+ +LH IIHRDLK SNI++ D KI DFG+AR + + T +V
Sbjct: 135 MLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMM--TPYVVTR 189
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
Y Y +PE + + D++S G ++ +++ G
Sbjct: 190 Y-YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGT 195
I+ L +LHQ II+RDLK NI+L+ + K++DFG+ + + +T GT
Sbjct: 130 ISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHT--FCGT 184
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
YM+PE ++ + D +S G L+ +++G
Sbjct: 185 IEYMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 89/199 (44%), Gaps = 36/199 (18%)
Query: 56 LGEGGFGPVYKGV-LKNGDEIAVKRLSGRS-GQGLRELKNK------LRLLGCC-----I 102
+G GGF V + G+ +A+K + + G L +K + LR C +
Sbjct: 18 IGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVL 77
Query: 103 DKDEKI-LIYEYMPNKSLDFFLFDWV----------TRVRIIEGIAQGLLYLHQYSRVRI 151
+ KI ++ EY P L FD++ TRV + I + Y+H
Sbjct: 78 ETANKIFMVLEYCPGGEL----FDYIISQDRLSEEETRV-VFRQIVSAVAYVHSQGYA-- 130
Query: 152 IHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQG--IF 209
HRDLK N+L D+ K+ DFG+ +GN+ + G+ Y +PE IQG
Sbjct: 131 -HRDLKPENLLFDEYHKLKLIDFGLCAKPKGNK-DYHLQTCCGSLAYAAPE-LIQGKSYL 187
Query: 210 SIKSDVFSFGVLLLKIVSG 228
++DV+S G+LL ++ G
Sbjct: 188 GSEADVWSMGILLYVLMCG 206
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 93/213 (43%), Gaps = 35/213 (16%)
Query: 42 SVSTATNKFSDANKLGEGGFGPV---YKGVLKNGDEIAVKRLSGRSGQGLRELKNKLR-- 96
S T ++ + +G G G V Y +L+ +A+K+LS R Q K R
Sbjct: 18 STFTVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLS-RPFQNQTHAKRAYREL 74
Query: 97 -LLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTRVRIIEGIAQ----------------- 138
L+ K+ L+ + P KSL+ F ++ + ++Q
Sbjct: 75 VLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQ 134
Query: 139 ---GLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGT 195
G+ +LH IIHRDLK SNI++ D KI DFG+AR + + T +V
Sbjct: 135 MLCGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMM--TPYVVTR 189
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
Y Y +PE + + D++S G ++ +++ G
Sbjct: 190 Y-YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 93/197 (47%), Gaps = 34/197 (17%)
Query: 56 LGEGGFGPVYKGVLKNGDE----IAVKRLSGRSGQGLRE--LKNKL-----------RLL 98
+GEG FG V++G+ + + +A+K + +RE L+ L +L+
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 99 GCCIDKDEKILIYEYMPNKSLDFFLFDWVTRVRIIE-GIAQGLLYLHQYSRV-------R 150
G I ++ +I E L FL +VR +A +LY +Q S R
Sbjct: 106 GV-ITENPVWIIMELCTLGELRSFL-----QVRKYSLDLASLILYAYQLSTALAYLESKR 159
Query: 151 IIHRDLKVSNILLDKDMNPKISDFGIARICRGNE-LQANTGRIVGTYRYMSPEYAIQGIF 209
+HRD+ N+L+ + K+ DFG++R + +A+ G++ ++M+PE F
Sbjct: 160 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL--PIKWMAPESINFRRF 217
Query: 210 SIKSDVFSFGVLLLKIV 226
+ SDV+ FGV + +I+
Sbjct: 218 TSASDVWMFGVCMWEIL 234
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 93/197 (47%), Gaps = 34/197 (17%)
Query: 56 LGEGGFGPVYKGVLKNGDE----IAVKRLSGRSGQGLRE--LKNKL-----------RLL 98
+GEG FG V++G+ + + +A+K + +RE L+ L +L+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 99 GCCIDKDEKILIYEYMPNKSLDFFLFDWVTRVRIIE-GIAQGLLYLHQYSRV-------R 150
G I ++ +I E L FL +VR +A +LY +Q S R
Sbjct: 458 GV-ITENPVWIIMELCTLGELRSFL-----QVRKFSLDLASLILYAYQLSTALAYLESKR 511
Query: 151 IIHRDLKVSNILLDKDMNPKISDFGIARICRGNE-LQANTGRIVGTYRYMSPEYAIQGIF 209
+HRD+ N+L+ + K+ DFG++R + +A+ G++ ++M+PE F
Sbjct: 512 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL--PIKWMAPESINFRRF 569
Query: 210 SIKSDVFSFGVLLLKIV 226
+ SDV+ FGV + +I+
Sbjct: 570 TSASDVWMFGVCMWEIL 586
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 93/197 (47%), Gaps = 34/197 (17%)
Query: 56 LGEGGFGPVYKGVLKNGDE----IAVKRLSGRSGQGLRE--LKNKL-----------RLL 98
+GEG FG V++G+ + + +A+K + +RE L+ L +L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 99 GCCIDKDEKILIYEYMPNKSLDFFLFDWVTRVRIIE-GIAQGLLYLHQYSRV-------R 150
G I ++ +I E L FL +VR +A +LY +Q S R
Sbjct: 78 GV-ITENPVWIIMELCTLGELRSFL-----QVRKYSLDLASLILYAYQLSTALAYLESKR 131
Query: 151 IIHRDLKVSNILLDKDMNPKISDFGIARICRGNE-LQANTGRIVGTYRYMSPEYAIQGIF 209
+HRD+ N+L+ + K+ DFG++R + +A+ G++ ++M+PE F
Sbjct: 132 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL--PIKWMAPESINFRRF 189
Query: 210 SIKSDVFSFGVLLLKIV 226
+ SDV+ FGV + +I+
Sbjct: 190 TSASDVWMFGVCMWEIL 206
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 93/197 (47%), Gaps = 34/197 (17%)
Query: 56 LGEGGFGPVYKGVLKNGDE----IAVKRLSGRSGQGLRE--LKNKL-----------RLL 98
+GEG FG V++G+ + + +A+K + +RE L+ L +L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 99 GCCIDKDEKILIYEYMPNKSLDFFLFDWVTRVRIIE-GIAQGLLYLHQYSRV-------R 150
G I ++ +I E L FL +VR +A +LY +Q S R
Sbjct: 78 GV-ITENPVWIIMELCTLGELRSFL-----QVRKYSLDLASLILYAYQLSTALAYLESKR 131
Query: 151 IIHRDLKVSNILLDKDMNPKISDFGIARICRGNE-LQANTGRIVGTYRYMSPEYAIQGIF 209
+HRD+ N+L+ + K+ DFG++R + +A+ G++ ++M+PE F
Sbjct: 132 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL--PIKWMAPESINFRRF 189
Query: 210 SIKSDVFSFGVLLLKIV 226
+ SDV+ FGV + +I+
Sbjct: 190 TSASDVWMFGVCMWEIL 206
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 96/224 (42%), Gaps = 54/224 (24%)
Query: 43 VSTATNKFSDANKLGEGGFGPVYKGVLK-NGDEIAVKRLSGRSG-----QGLRELK---- 92
V ++ F + LGEG +G V K G+ +A+K++ + LRE+K
Sbjct: 6 VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKH 65
Query: 93 ---------------------NKLRLLGCCIDKD-EKILIYEYMPNKSLDFFLFDWVTRV 130
N++ ++ + D +++ + + + + +F++ + V
Sbjct: 66 FKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAV 125
Query: 131 RIIEGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNEL----- 185
+++ G +IHRDLK SN+L++ + + K+ DFG+ARI +
Sbjct: 126 KVLHG-------------SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEP 172
Query: 186 ---QANTGRIVGTYRYMSPEYAIQGI-FSIKSDVFSFGVLLLKI 225
Q+ V T Y +PE + +S DV+S G +L ++
Sbjct: 173 TGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 93/197 (47%), Gaps = 34/197 (17%)
Query: 56 LGEGGFGPVYKGVLKNGDE----IAVKRLSGRSGQGLRE--LKNKL-----------RLL 98
+GEG FG V++G+ + + +A+K + +RE L+ L +L+
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 99 GCCIDKDEKILIYEYMPNKSLDFFLFDWVTRVRIIE-GIAQGLLYLHQYSRV-------R 150
G I ++ +I E L FL +VR +A +LY +Q S R
Sbjct: 83 GV-ITENPVWIIMELCTLGELRSFL-----QVRKYSLDLASLILYAYQLSTALAYLESKR 136
Query: 151 IIHRDLKVSNILLDKDMNPKISDFGIARICRGNE-LQANTGRIVGTYRYMSPEYAIQGIF 209
+HRD+ N+L+ + K+ DFG++R + +A+ G++ ++M+PE F
Sbjct: 137 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL--PIKWMAPESINFRRF 194
Query: 210 SIKSDVFSFGVLLLKIV 226
+ SDV+ FGV + +I+
Sbjct: 195 TSASDVWMFGVCMWEIL 211
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 51/94 (54%), Gaps = 7/94 (7%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQAN-TGRIVG 194
I+ L +LHQ II+RDLK NI+L+ + K++DFG +C+ + T G
Sbjct: 130 ISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFG---LCKESIHDGTVTHXFCG 183
Query: 195 TYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
T YM+PE ++ + D +S G L+ +++G
Sbjct: 184 TIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 96/224 (42%), Gaps = 54/224 (24%)
Query: 43 VSTATNKFSDANKLGEGGFGPVYKGVLK-NGDEIAVKRLSGRSG-----QGLRELK---- 92
V ++ F + LGEG +G V K G+ +A+K++ + LRE+K
Sbjct: 6 VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKH 65
Query: 93 ---------------------NKLRLLGCCIDKD-EKILIYEYMPNKSLDFFLFDWVTRV 130
N++ ++ + D +++ + + + + +F++ + V
Sbjct: 66 FKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAV 125
Query: 131 RIIEGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNEL----- 185
+++ G +IHRDLK SN+L++ + + K+ DFG+ARI +
Sbjct: 126 KVLHG-------------SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEP 172
Query: 186 ---QANTGRIVGTYRYMSPEYAIQGI-FSIKSDVFSFGVLLLKI 225
Q+ V T Y +PE + +S DV+S G +L ++
Sbjct: 173 TGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 93/197 (47%), Gaps = 34/197 (17%)
Query: 56 LGEGGFGPVYKGVLKNGDE----IAVKRLSGRSGQGLRE--LKNKL-----------RLL 98
+GEG FG V++G+ + + +A+K + +RE L+ L +L+
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 99 GCCIDKDEKILIYEYMPNKSLDFFLFDWVTRVRIIE-GIAQGLLYLHQYSRV-------R 150
G I ++ +I E L FL +VR +A +LY +Q S R
Sbjct: 75 GV-ITENPVWIIMELCTLGELRSFL-----QVRKYSLDLASLILYAYQLSTALAYLESKR 128
Query: 151 IIHRDLKVSNILLDKDMNPKISDFGIARICRGNE-LQANTGRIVGTYRYMSPEYAIQGIF 209
+HRD+ N+L+ + K+ DFG++R + +A+ G++ ++M+PE F
Sbjct: 129 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL--PIKWMAPESINFRRF 186
Query: 210 SIKSDVFSFGVLLLKIV 226
+ SDV+ FGV + +I+
Sbjct: 187 TSASDVWMFGVCMWEIL 203
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 58/104 (55%), Gaps = 15/104 (14%)
Query: 132 IIEGIAQGLLYLHQYSRVRIIHRDLKVSNIL-LDKDMNP---KISDFGIARICRGNELQA 187
++ I + + YLH ++HRDLK SNIL +D+ NP +I DFG A+ +L+A
Sbjct: 126 VLHTIGKTVEYLHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAK-----QLRA 177
Query: 188 NTGRIVG---TYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
G ++ T +++PE + + D++S G+LL +++G
Sbjct: 178 ENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 58/104 (55%), Gaps = 15/104 (14%)
Query: 132 IIEGIAQGLLYLHQYSRVRIIHRDLKVSNIL-LDKDMNP---KISDFGIARICRGNELQA 187
++ I + + YLH ++HRDLK SNIL +D+ NP +I DFG A+ +L+A
Sbjct: 126 VLHTIGKTVEYLHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAK-----QLRA 177
Query: 188 NTGRIVG---TYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
G ++ T +++PE + + D++S G+LL +++G
Sbjct: 178 ENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 93/197 (47%), Gaps = 34/197 (17%)
Query: 56 LGEGGFGPVYKGVLKNGDE----IAVKRLSGRSGQGLRE--LKNKL-----------RLL 98
+GEG FG V++G+ + + +A+K + +RE L+ L +L+
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 99 GCCIDKDEKILIYEYMPNKSLDFFLFDWVTRVRIIE-GIAQGLLYLHQYSRV-------R 150
G I ++ +I E L FL +VR +A +LY +Q S R
Sbjct: 80 GV-ITENPVWIIMELCTLGELRSFL-----QVRKYSLDLASLILYAYQLSTALAYLESKR 133
Query: 151 IIHRDLKVSNILLDKDMNPKISDFGIARICRGNE-LQANTGRIVGTYRYMSPEYAIQGIF 209
+HRD+ N+L+ + K+ DFG++R + +A+ G++ ++M+PE F
Sbjct: 134 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL--PIKWMAPESINFRRF 191
Query: 210 SIKSDVFSFGVLLLKIV 226
+ SDV+ FGV + +I+
Sbjct: 192 TSASDVWMFGVCMWEIL 208
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 93/197 (47%), Gaps = 34/197 (17%)
Query: 56 LGEGGFGPVYKGVLKNGDE----IAVKRLSGRSGQGLRE--LKNKL-----------RLL 98
+GEG FG V++G+ + + +A+K + +RE L+ L +L+
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 99 GCCIDKDEKILIYEYMPNKSLDFFLFDWVTRVRIIE-GIAQGLLYLHQYSRV-------R 150
G I ++ +I E L FL +VR +A +LY +Q S R
Sbjct: 81 GV-ITENPVWIIMELCTLGELRSFL-----QVRKYSLDLASLILYAYQLSTALAYLESKR 134
Query: 151 IIHRDLKVSNILLDKDMNPKISDFGIARICRGNE-LQANTGRIVGTYRYMSPEYAIQGIF 209
+HRD+ N+L+ + K+ DFG++R + +A+ G++ ++M+PE F
Sbjct: 135 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL--PIKWMAPESINFRRF 192
Query: 210 SIKSDVFSFGVLLLKIV 226
+ SDV+ FGV + +I+
Sbjct: 193 TSASDVWMFGVCMWEIL 209
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 139 GLLYLHQYSRVRIIHRDLKVSNILLDKDMNP--KISDFGIARICRGNELQANTGRIVGTY 196
G+ Y H ++I HRDLK+ N LLD P KI DFG + + + L + VGT
Sbjct: 128 GVSYCHS---MQICHRDLKLENTLLDGSPAPRLKICDFGYS---KSSVLHSQPKSTVGTP 181
Query: 197 RYMSPEYAIQGIFSIK-SDVFSFGVLLLKIVSG 228
Y++PE ++ + K +DV+S GV L ++ G
Sbjct: 182 AYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVG 214
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 96/205 (46%), Gaps = 28/205 (13%)
Query: 48 NKFSDANKLGEGGFGPVYKGVLKNGDEI-AVKRL------SGRSGQGLREL--------K 92
K+ K+GEG +G V+K + EI A+KR+ G LRE+ K
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61
Query: 93 NKLRLLGCCIDKDEKILIYEYMPNKSLDFF------LFDWVTRVRIIEGIAQGLLYLHQY 146
N +RL + L++E+ +F L + + + + + +GL + H
Sbjct: 62 NIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQ-LLKGLGFCHSR 120
Query: 147 SRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQ 206
+ ++HRDLK N+L++++ K+++FG+AR G ++ + +V T Y P+
Sbjct: 121 N---VLHRDLKPQNLLINRNGELKLANFGLAR-AFGIPVRCYSAEVV-TLWYRPPDVLFG 175
Query: 207 G-IFSIKSDVFSFGVLLLKIVSGKK 230
++S D++S G + ++ + +
Sbjct: 176 AKLYSTSIDMWSAGCIFAELANAGR 200
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 96/224 (42%), Gaps = 54/224 (24%)
Query: 43 VSTATNKFSDANKLGEGGFGPVYKGVLK-NGDEIAVKRLSGRSG-----QGLRELK---- 92
V ++ F + LGEG +G V K G+ +A+K++ + LRE+K
Sbjct: 6 VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKH 65
Query: 93 ---------------------NKLRLLGCCIDKD-EKILIYEYMPNKSLDFFLFDWVTRV 130
N++ ++ + D +++ + + + + +F++ + V
Sbjct: 66 FKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAV 125
Query: 131 RIIEGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNEL----- 185
+++ G +IHRDLK SN+L++ + + K+ DFG+ARI +
Sbjct: 126 KVLHG-------------SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEP 172
Query: 186 ---QANTGRIVGTYRYMSPEYAIQGI-FSIKSDVFSFGVLLLKI 225
Q+ V T Y +PE + +S DV+S G +L ++
Sbjct: 173 TGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 67/133 (50%), Gaps = 10/133 (7%)
Query: 109 LIYEYMPNKSLDFFLFDWVTRVRIIE-GIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDM 167
++ EYMP L + ++ + A+ +L L + IHRD+K N+LLDK
Sbjct: 146 MVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSG 205
Query: 168 NPKISDFGIA-RICRGNELQANTGRIVGTYRYMSPE----YAIQGIFSIKSDVFSFGVLL 222
+ K++DFG ++ + ++ +T VGT Y+SPE G + + D +S GV L
Sbjct: 206 HLKLADFGTCMKMNKEGMVRCDTA--VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFL 263
Query: 223 LKIVSGKKTTGFY 235
+++ G T FY
Sbjct: 264 YEMLVGD--TPFY 274
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 49/87 (56%), Gaps = 8/87 (9%)
Query: 142 YLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSP 201
YLH + +I+RDLK N+L+D+ +++DFG A+ +G T + GT Y++P
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAP 207
Query: 202 EYAIQGIFSIKSDVFSFGVLLLKIVSG 228
+ ++ D ++ GVL+ ++ +G
Sbjct: 208 AIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 56/100 (56%), Gaps = 15/100 (15%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNIL-LDKDMNP---KISDFGIARICRGNELQANTGR 191
I + + YLH ++HRDLK SNIL +D+ NP +I DFG A+ +L+A G
Sbjct: 125 ITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAK-----QLRAENGL 176
Query: 192 IVG---TYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
++ T +++PE + + D++S GVLL +++G
Sbjct: 177 LMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTG 216
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 67/133 (50%), Gaps = 10/133 (7%)
Query: 109 LIYEYMPNKSLDFFLFDWVTRVRIIE-GIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDM 167
++ EYMP L + ++ + A+ +L L + IHRD+K N+LLDK
Sbjct: 151 MVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSG 210
Query: 168 NPKISDFGIA-RICRGNELQANTGRIVGTYRYMSPE----YAIQGIFSIKSDVFSFGVLL 222
+ K++DFG ++ + ++ +T VGT Y+SPE G + + D +S GV L
Sbjct: 211 HLKLADFGTCMKMNKEGMVRCDTA--VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFL 268
Query: 223 LKIVSGKKTTGFY 235
+++ G T FY
Sbjct: 269 YEMLVGD--TPFY 279
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 92/197 (46%), Gaps = 34/197 (17%)
Query: 56 LGEGGFGPVYKGVLKNGD----EIAVKRLSGRSGQGLRE--LKNKL-----------RLL 98
+GEG FG V++G+ + + +A+K + +RE L+ L +L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 99 GCCIDKDEKILIYEYMPNKSLDFFLFDWVTRVRIIE-GIAQGLLYLHQYSRV-------R 150
G I ++ +I E L FL +VR +A +LY +Q S R
Sbjct: 78 GV-ITENPVWIIMELCTLGELRSFL-----QVRKFSLDLASLILYAYQLSTALAYLESKR 131
Query: 151 IIHRDLKVSNILLDKDMNPKISDFGIARICRGNE-LQANTGRIVGTYRYMSPEYAIQGIF 209
+HRD+ N+L+ K+ DFG++R + +A+ G++ ++M+PE F
Sbjct: 132 FVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKL--PIKWMAPESINFRRF 189
Query: 210 SIKSDVFSFGVLLLKIV 226
+ SDV+ FGV + +I+
Sbjct: 190 TSASDVWMFGVCMWEIL 206
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 67/133 (50%), Gaps = 10/133 (7%)
Query: 109 LIYEYMPNKSLDFFLFDWVTRVRIIE-GIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDM 167
++ EYMP L + ++ + A+ +L L + IHRD+K N+LLDK
Sbjct: 151 MVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSG 210
Query: 168 NPKISDFGIA-RICRGNELQANTGRIVGTYRYMSPE----YAIQGIFSIKSDVFSFGVLL 222
+ K++DFG ++ + ++ +T VGT Y+SPE G + + D +S GV L
Sbjct: 211 HLKLADFGTCMKMNKEGMVRCDTA--VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFL 268
Query: 223 LKIVSGKKTTGFY 235
+++ G T FY
Sbjct: 269 YEMLVGD--TPFY 279
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 86/196 (43%), Gaps = 30/196 (15%)
Query: 56 LGEGGFGPVYKGVLKNGDE-IAVKRLSGRSGQGLRELKNKLRLLGCCIDKDEKILIYEYM 114
LGEG F K V K ++ AVK +S R ++ L+L C + ++E
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALKL---CEGHPNIVKLHEVF 75
Query: 115 PNKSLDFF---------LFDWVTRVR---------IIEGIAQGLLYLHQYSRVRIIHRDL 156
++ F LF+ + + + I+ + + ++H V ++HRDL
Sbjct: 76 HDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHD---VGVVHRDL 132
Query: 157 KVSNILL---DKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKS 213
K N+L + ++ KI DFG AR+ + T T Y +PE Q +
Sbjct: 133 KPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCF--TLHYAAPELLNQNGYDESC 190
Query: 214 DVFSFGVLLLKIVSGK 229
D++S GV+L ++SG+
Sbjct: 191 DLWSLGVILYTMLSGQ 206
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 92/197 (46%), Gaps = 34/197 (17%)
Query: 56 LGEGGFGPVYKGVLKNGDE----IAVKRLSGRSGQGLRE--LKNKL-----------RLL 98
+GEG FG V++G+ + + +A+K + +RE L+ L +L+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 99 GCCIDKDEKILIYEYMPNKSLDFFLFDWVTRVRIIE-GIAQGLLYLHQYSRV-------R 150
G I ++ +I E L FL +VR +A +LY +Q S R
Sbjct: 458 GV-ITENPVWIIMELCTLGELRSFL-----QVRKFSLDLASLILYAYQLSTALAYLESKR 511
Query: 151 IIHRDLKVSNILLDKDMNPKISDFGIARICRGNE-LQANTGRIVGTYRYMSPEYAIQGIF 209
+HRD+ N+L+ K+ DFG++R + +A+ G++ ++M+PE F
Sbjct: 512 FVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKL--PIKWMAPESINFRRF 569
Query: 210 SIKSDVFSFGVLLLKIV 226
+ SDV+ FGV + +I+
Sbjct: 570 TSASDVWMFGVCMWEIL 586
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 110/273 (40%), Gaps = 59/273 (21%)
Query: 42 SVSTATNKFSDANKL-----GEGGFGPVYKGV-LKNGDEIAVKRLSGRSGQGLRELKNKL 95
S + + +F D +L GEG V + L E AVK + + G + ++
Sbjct: 2 STDSFSGRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREV 61
Query: 96 RLLGCC-------------IDKDEKILIYEYMPNKSLDFFL-----FDWVTRVRIIEGIA 137
+L C ++D L++E M S+ + F+ + +++ +A
Sbjct: 62 EMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVA 121
Query: 138 QGLLYLHQYSRVRIIHRDLKVSNILLDK--DMNP-KISDFGIARICRGNELQANTGRI-- 192
L +LH I HRDLK NIL + ++P KI DFG+ G +L + I
Sbjct: 122 SALDFLHNKG---IAHRDLKPENILCEHPNQVSPVKICDFGLG---SGIKLNGDCSPIST 175
Query: 193 ------VGTYRYMSPEYA-----IQGIFSIKSDVFSFGVLLLKIVSG--------KKTTG 233
G+ YM+PE I+ + D++S GV+L ++SG G
Sbjct: 176 PELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCG 235
Query: 234 FYRTYSFT-----LLGYISENIYEFPSVDTHNV 261
+ R + L I E YEFP D ++
Sbjct: 236 WDRGEACPACQNMLFESIQEGKYEFPDKDWAHI 268
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 67/127 (52%), Gaps = 10/127 (7%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGT 195
I + +L + ++ +HRD+K N+LLD + + +++DFG + + ++ + VGT
Sbjct: 181 IGEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFG-SCLKMNDDGTVQSSVAVGT 239
Query: 196 YRYMSPE--YAIQ---GIFSIKSDVFSFGVLLLKIVSGKKTTGFYRTYSFTLLGYI--SE 248
Y+SPE A++ G + + D +S GV + +++ G+ T FY G I E
Sbjct: 240 PDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGE--TPFYAESLVETYGKIMNHE 297
Query: 249 NIYEFPS 255
++FPS
Sbjct: 298 ERFQFPS 304
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 52/93 (55%), Gaps = 9/93 (9%)
Query: 139 GLLYLHQYSRVRIIHRDLKVSNILLDKDMNP--KISDFGIARICRGNELQANTGRIVGTY 196
G+ Y H +++ HRDLK+ N LLD P KI+DFG + + + L + VGT
Sbjct: 127 GVSYAHA---MQVAHRDLKLENTLLDGSPAPRLKIADFGYS---KASVLHSQPKSAVGTP 180
Query: 197 RYMSPEYAIQGIFSIK-SDVFSFGVLLLKIVSG 228
Y++PE ++ + K +DV+S GV L ++ G
Sbjct: 181 AYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 67/127 (52%), Gaps = 10/127 (7%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGT 195
I + +L + ++ +HRD+K N+LLD + + +++DFG + + ++ + VGT
Sbjct: 197 IGEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFG-SCLKMNDDGTVQSSVAVGT 255
Query: 196 YRYMSPE--YAIQ---GIFSIKSDVFSFGVLLLKIVSGKKTTGFYRTYSFTLLGYI--SE 248
Y+SPE A++ G + + D +S GV + +++ G+ T FY G I E
Sbjct: 256 PDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGE--TPFYAESLVETYGKIMNHE 313
Query: 249 NIYEFPS 255
++FPS
Sbjct: 314 ERFQFPS 320
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 55/96 (57%), Gaps = 6/96 (6%)
Query: 138 QGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIAR-ICRGN-ELQANTGRIVGT 195
+GL Y+H ++IHRDLK SN+L++++ KI DFG+AR +C E Q V T
Sbjct: 170 RGLKYMHS---AQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVAT 226
Query: 196 YRYMSPEYAIQ-GIFSIKSDVFSFGVLLLKIVSGKK 230
Y +PE + ++ D++S G + ++++ ++
Sbjct: 227 RWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 93/222 (41%), Gaps = 37/222 (16%)
Query: 40 FSSVSTATNKFSDANKLGEGGFGPVYKGVLKNGDEIAVK--RLSGRSGQGLRELKNKLRL 97
F S+S +S ++G GG V++ + + A+K L Q L +N++
Sbjct: 20 FQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAY 79
Query: 98 LGCCIDKDEKIL---------IYEYMPNKSLDFFLFDWVTRVRIIE---------GIAQG 139
L +KI+ Y YM + + L W+ + + I+ + +
Sbjct: 80 LNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEA 139
Query: 140 LLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYM 199
+ +HQ+ I+H DLK +N L+ M K+ DFGIA + + VGT YM
Sbjct: 140 VHTIHQHG---IVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDXXXVVKDSQVGTVNYM 195
Query: 200 SPEYAIQGIFSIKS------------DVFSFGVLLLKIVSGK 229
PE AI+ + S + DV+S G +L + GK
Sbjct: 196 PPE-AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 236
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 60/122 (49%), Gaps = 14/122 (11%)
Query: 142 YLHQYSRVRIIHRDLKVSNILL---DKDMNPKISDFGIARICRGNELQANTGRIVGTYRY 198
YLH+ IIHRDLK N+LL ++D KI+DFG ++I L + GT Y
Sbjct: 128 YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT---LCGTPTY 181
Query: 199 MSPEYAIQ---GIFSIKSDVFSFGVLLLKIVSGKKTTGFYRTYSFTLLGYISENIYEF-P 254
++PE + ++ D +S GV+L +SG +RT +L I+ Y F P
Sbjct: 182 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT-QVSLKDQITSGKYNFIP 240
Query: 255 SV 256
V
Sbjct: 241 EV 242
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 60/122 (49%), Gaps = 14/122 (11%)
Query: 142 YLHQYSRVRIIHRDLKVSNILL---DKDMNPKISDFGIARICRGNELQANTGRIVGTYRY 198
YLH+ IIHRDLK N+LL ++D KI+DFG ++I L + GT Y
Sbjct: 135 YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT---LCGTPTY 188
Query: 199 MSPEYAIQ---GIFSIKSDVFSFGVLLLKIVSGKKTTGFYRTYSFTLLGYISENIYEF-P 254
++PE + ++ D +S GV+L +SG +RT +L I+ Y F P
Sbjct: 189 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT-QVSLKDQITSGKYNFIP 247
Query: 255 SV 256
V
Sbjct: 248 EV 249
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 57/104 (54%), Gaps = 8/104 (7%)
Query: 138 QGLLYLHQYSRVRIIHRDLKVSNILLDKD-MNPKISDFGIARICRGNELQAN--TGR-IV 193
+GL YLH SR RI+H D+K N+LL D + + DFG A + + L + TG I
Sbjct: 177 EGLEYLH--SR-RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIP 233
Query: 194 GTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG-KKTTGFYR 236
GT +M+PE + K DV+S ++L +++G T F+R
Sbjct: 234 GTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFR 277
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 60/122 (49%), Gaps = 14/122 (11%)
Query: 142 YLHQYSRVRIIHRDLKVSNILL---DKDMNPKISDFGIARICRGNELQANTGRIVGTYRY 198
YLH+ IIHRDLK N+LL ++D KI+DFG ++I L + GT Y
Sbjct: 129 YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT---LCGTPTY 182
Query: 199 MSPEYAIQ---GIFSIKSDVFSFGVLLLKIVSGKKTTGFYRTYSFTLLGYISENIYEF-P 254
++PE + ++ D +S GV+L +SG +RT +L I+ Y F P
Sbjct: 183 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT-QVSLKDQITSGKYNFIP 241
Query: 255 SV 256
V
Sbjct: 242 EV 243
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 49/87 (56%), Gaps = 8/87 (9%)
Query: 142 YLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSP 201
YLH + +I+RDLK N+L+D+ +++DFG A+ +G T + GT ++P
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEALAP 207
Query: 202 EYAIQGIFSIKSDVFSFGVLLLKIVSG 228
E + ++ D ++ GVL+ ++ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 60/122 (49%), Gaps = 14/122 (11%)
Query: 142 YLHQYSRVRIIHRDLKVSNILL---DKDMNPKISDFGIARICRGNELQANTGRIVGTYRY 198
YLH+ IIHRDLK N+LL ++D KI+DFG ++I L + GT Y
Sbjct: 129 YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT---LCGTPTY 182
Query: 199 MSPEYAIQ---GIFSIKSDVFSFGVLLLKIVSGKKTTGFYRTYSFTLLGYISENIYEF-P 254
++PE + ++ D +S GV+L +SG +RT +L I+ Y F P
Sbjct: 183 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT-QVSLKDQITSGKYNFIP 241
Query: 255 SV 256
V
Sbjct: 242 EV 243
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 60/122 (49%), Gaps = 14/122 (11%)
Query: 142 YLHQYSRVRIIHRDLKVSNILL---DKDMNPKISDFGIARICRGNELQANTGRIVGTYRY 198
YLH+ IIHRDLK N+LL ++D KI+DFG ++I L + GT Y
Sbjct: 129 YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT---LCGTPTY 182
Query: 199 MSPEYAIQ---GIFSIKSDVFSFGVLLLKIVSGKKTTGFYRTYSFTLLGYISENIYEF-P 254
++PE + ++ D +S GV+L +SG +RT +L I+ Y F P
Sbjct: 183 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT-QVSLKDQITSGKYNFIP 241
Query: 255 SV 256
V
Sbjct: 242 EV 243
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 107/234 (45%), Gaps = 40/234 (17%)
Query: 50 FSDANKLGEGGFGPVYKGVLKN-GDEIAVKRL------SGRSGQGLRELKNKLRLLGCCI 102
+ +LG G F V K K+ G + A K + S R G +++ ++ +L I
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE-I 71
Query: 103 DKDEKILIYEYMPNKS-----LDFF----LFDWVTR---------VRIIEGIAQGLLYLH 144
I ++E NK+ L+ LFD++ ++ I G+ YLH
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 145 QYSRVRIIHRDLKVSNI-LLDKDM-NPKIS--DFGIA-RICRGNELQANTGRIVGTYRYM 199
++I H DLK NI LLD+++ P+I DFG+A +I GNE + I GT ++
Sbjct: 132 S---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK----NIFGTPEFV 184
Query: 200 SPEYAIQGIFSIKSDVFSFGVLLLKIVSGKKTTGFYRTYSFTLLGYISENIYEF 253
+PE +++D++S GV+ ++SG + F L +S YEF
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSG--ASPFLGDTKQETLANVSAVNYEF 236
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 59/101 (58%), Gaps = 12/101 (11%)
Query: 133 IEGIAQGLLYLHQYSRVRIIHRDLKVSNI-LLDKDM-NP--KISDFGIA-RICRGNELQA 187
++ I G+ YLH ++I H DLK NI LLD+++ P KI DFG+A +I GNE +
Sbjct: 120 LKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK- 175
Query: 188 NTGRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
I GT +++PE +++D++S GV+ ++SG
Sbjct: 176 ---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 59/101 (58%), Gaps = 12/101 (11%)
Query: 133 IEGIAQGLLYLHQYSRVRIIHRDLKVSNI-LLDKDM-NP--KISDFGIA-RICRGNELQA 187
++ I G+ YLH ++I H DLK NI LLD+++ P KI DFG+A +I GNE +
Sbjct: 120 LKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK- 175
Query: 188 NTGRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
I GT +++PE +++D++S GV+ ++SG
Sbjct: 176 ---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 59/101 (58%), Gaps = 12/101 (11%)
Query: 133 IEGIAQGLLYLHQYSRVRIIHRDLKVSNI-LLDKDM-NP--KISDFGIA-RICRGNELQA 187
++ I G+ YLH ++I H DLK NI LLD+++ P KI DFG+A +I GNE +
Sbjct: 119 LKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK- 174
Query: 188 NTGRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
I GT +++PE +++D++S GV+ ++SG
Sbjct: 175 ---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 55/96 (57%), Gaps = 6/96 (6%)
Query: 138 QGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIAR-ICRGN-ELQANTGRIVGT 195
+GL Y+H ++IHRDLK SN+L++++ KI DFG+AR +C E Q V T
Sbjct: 169 RGLKYMHS---AQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVAT 225
Query: 196 YRYMSPEYAIQ-GIFSIKSDVFSFGVLLLKIVSGKK 230
Y +PE + ++ D++S G + ++++ ++
Sbjct: 226 RWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 92/198 (46%), Gaps = 30/198 (15%)
Query: 55 KLGEGGFGPVYKGV-LKNGDEIAVKRL-----SGRSGQGLRELKNKLRLLGC-------- 100
+LG G +G V K + +G AVKR+ S + L +L R + C
Sbjct: 41 ELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRTVDCPFTVTFYG 100
Query: 101 CIDKDEKILIYEYMPNKSLDFFLFDWVTRVRIIE---------GIAQGLLYLHQYSRVRI 151
+ ++ + I + + SLD F + + + I I + L +LH S++ +
Sbjct: 101 ALFREGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH--SKLSV 158
Query: 152 IHRDLKVSNILLDKDMNPKISDFGIARICRGN---ELQANTGRIVGTYRYMSPEYAIQGI 208
IHRD+K SN+L++ K DFGI+ + ++ A R ++PE +G
Sbjct: 159 IHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDAGCKPYXAPER-INPELNQKG- 216
Query: 209 FSIKSDVFSFGVLLLKIV 226
+S+KSD++S G+ +++
Sbjct: 217 YSVKSDIWSLGITXIELA 234
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 59/101 (58%), Gaps = 12/101 (11%)
Query: 133 IEGIAQGLLYLHQYSRVRIIHRDLKVSNI-LLDKDM-NP--KISDFGIA-RICRGNELQA 187
++ I G+ YLH ++I H DLK NI LLD+++ P KI DFG+A +I GNE +
Sbjct: 120 LKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK- 175
Query: 188 NTGRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
I GT +++PE +++D++S GV+ ++SG
Sbjct: 176 ---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 59/101 (58%), Gaps = 12/101 (11%)
Query: 133 IEGIAQGLLYLHQYSRVRIIHRDLKVSNI-LLDKDM-NP--KISDFGIA-RICRGNELQA 187
++ I G+ YLH ++I H DLK NI LLD+++ P KI DFG+A +I GNE +
Sbjct: 120 LKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK- 175
Query: 188 NTGRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
I GT +++PE +++D++S GV+ ++SG
Sbjct: 176 ---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 57/104 (54%), Gaps = 8/104 (7%)
Query: 138 QGLLYLHQYSRVRIIHRDLKVSNILLDKD-MNPKISDFGIARICRGNELQAN--TGR-IV 193
+GL YLH SR RI+H D+K N+LL D + + DFG A + + L + TG I
Sbjct: 196 EGLEYLH--SR-RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIP 252
Query: 194 GTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG-KKTTGFYR 236
GT +M+PE + K DV+S ++L +++G T F+R
Sbjct: 253 GTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFR 296
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 59/101 (58%), Gaps = 12/101 (11%)
Query: 133 IEGIAQGLLYLHQYSRVRIIHRDLKVSNI-LLDKDM-NP--KISDFGIA-RICRGNELQA 187
++ I G+ YLH ++I H DLK NI LLD+++ P KI DFG+A +I GNE +
Sbjct: 119 LKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK- 174
Query: 188 NTGRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
I GT +++PE +++D++S GV+ ++SG
Sbjct: 175 ---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 59/101 (58%), Gaps = 12/101 (11%)
Query: 133 IEGIAQGLLYLHQYSRVRIIHRDLKVSNI-LLDKDM-NPKIS--DFGIA-RICRGNELQA 187
++ I G+ YLH ++I H DLK NI LLD+++ P+I DFG+A +I GNE +
Sbjct: 120 LKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK- 175
Query: 188 NTGRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
I GT +++PE +++D++S GV+ ++SG
Sbjct: 176 ---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 139 GLLYLHQYSRVRIIHRDLKVSNILLDKDMNP--KISDFGIARICRGNELQANTGRIVGTY 196
G+ Y H +++ HRDLK+ N LLD P KI DFG + + + L + VGT
Sbjct: 127 GVSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICDFGYS---KSSVLHSQPKSTVGTP 180
Query: 197 RYMSPEYAIQGIFSIK-SDVFSFGVLLLKIVSG 228
Y++PE ++ + K +DV+S GV L ++ G
Sbjct: 181 AYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 139 GLLYLHQYSRVRIIHRDLKVSNILLDKDMNP--KISDFGIARICRGNELQANTGRIVGTY 196
G+ Y H +++ HRDLK+ N LLD P KI DFG + + + L + VGT
Sbjct: 126 GVSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICDFGYS---KSSVLHSQPKSTVGTP 179
Query: 197 RYMSPEYAIQGIFSIK-SDVFSFGVLLLKIVSG 228
Y++PE ++ + K +DV+S GV L ++ G
Sbjct: 180 AYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 212
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 67/126 (53%), Gaps = 14/126 (11%)
Query: 133 IEGIAQGLLYLHQYSRVRIIHRDLKVSNI-LLDKDM-NPKIS--DFGIA-RICRGNELQA 187
++ I G+ YLH ++I H DLK NI LLD+++ P+I DFG+A +I GNE +
Sbjct: 120 LKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK- 175
Query: 188 NTGRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGKKTTGFYRTYSFTLLGYIS 247
I GT +++PE +++D++S GV+ ++SG + F L +S
Sbjct: 176 ---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG--ASPFLGDTKQETLANVS 230
Query: 248 ENIYEF 253
YEF
Sbjct: 231 AVNYEF 236
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 59/101 (58%), Gaps = 12/101 (11%)
Query: 133 IEGIAQGLLYLHQYSRVRIIHRDLKVSNI-LLDKDM-NP--KISDFGIA-RICRGNELQA 187
++ I G+ YLH ++I H DLK NI LLD+++ P KI DFG+A +I GNE +
Sbjct: 120 LKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK- 175
Query: 188 NTGRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
I GT +++PE +++D++S GV+ ++SG
Sbjct: 176 ---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 59/101 (58%), Gaps = 12/101 (11%)
Query: 133 IEGIAQGLLYLHQYSRVRIIHRDLKVSNI-LLDKDM-NP--KISDFGIA-RICRGNELQA 187
++ I G+ YLH ++I H DLK NI LLD+++ P KI DFG+A +I GNE +
Sbjct: 120 LKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK- 175
Query: 188 NTGRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
I GT +++PE +++D++S GV+ ++SG
Sbjct: 176 ---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 59/101 (58%), Gaps = 12/101 (11%)
Query: 133 IEGIAQGLLYLHQYSRVRIIHRDLKVSNI-LLDKDM-NP--KISDFGIA-RICRGNELQA 187
++ I G+ YLH ++I H DLK NI LLD+++ P KI DFG+A +I GNE +
Sbjct: 120 LKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK- 175
Query: 188 NTGRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
I GT +++PE +++D++S GV+ ++SG
Sbjct: 176 ---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 60/122 (49%), Gaps = 14/122 (11%)
Query: 142 YLHQYSRVRIIHRDLKVSNILL---DKDMNPKISDFGIARICRGNELQANTGRIVGTYRY 198
YLH+ IIHRDLK N+LL ++D KI+DFG ++I L + GT Y
Sbjct: 254 YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT---LCGTPTY 307
Query: 199 MSPEYAIQ---GIFSIKSDVFSFGVLLLKIVSGKKTTGFYRTYSFTLLGYISENIYEF-P 254
++PE + ++ D +S GV+L +SG +RT +L I+ Y F P
Sbjct: 308 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT-QVSLKDQITSGKYNFIP 366
Query: 255 SV 256
V
Sbjct: 367 EV 368
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 67/126 (53%), Gaps = 14/126 (11%)
Query: 133 IEGIAQGLLYLHQYSRVRIIHRDLKVSNI-LLDKDM-NPKIS--DFGIA-RICRGNELQA 187
++ I G+ YLH ++I H DLK NI LLD+++ P+I DFG+A +I GNE +
Sbjct: 120 LKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK- 175
Query: 188 NTGRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGKKTTGFYRTYSFTLLGYIS 247
I GT +++PE +++D++S GV+ ++SG + F L +S
Sbjct: 176 ---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG--ASPFLGDTKQETLANVS 230
Query: 248 ENIYEF 253
YEF
Sbjct: 231 AVNYEF 236
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 90/214 (42%), Gaps = 35/214 (16%)
Query: 42 SVSTATNKFSDANKLGEGGFGPV---YKGVLKNGDEIAVKRLSGRSGQGLRELKNKLR-- 96
S T ++ + +G G G V Y VL +A+K+LS R Q K R
Sbjct: 18 STFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLS-RPFQNQTHAKRAYREL 74
Query: 97 -LLGCCIDKDEKILIYEYMPNKSLDFFL--------------------FDWVTRVRIIEG 135
L+ K+ L+ + P K+L+ F D ++
Sbjct: 75 VLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQ 134
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGT 195
+ G+ +LH IIHRDLK SNI++ D KI DFG+AR + + T +V
Sbjct: 135 MLXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMM--TPYVVTR 189
Query: 196 YRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGK 229
Y Y +PE + + D++S G ++ ++V K
Sbjct: 190 Y-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 91/211 (43%), Gaps = 29/211 (13%)
Query: 42 SVSTATNKFSDANKLGEGGFGPV---YKGVLKNGDEIAVKRLSGRSGQGLRELKNKLR-- 96
S T ++ + +G G G V Y VL +A+K+LS R Q K R
Sbjct: 18 STFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLS-RPFQNQTHAKRAYREL 74
Query: 97 -LLGCCIDKDEKILIYEYMPNKSLDFF--------LFD----WVTRVRIIEGIAQGLLY- 142
L+ K+ L+ + P K+L+ F L D V ++ + LLY
Sbjct: 75 VLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQ 134
Query: 143 ----LHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRY 198
+ IIHRDLK SNI++ D KI DFG+AR + + T +V Y Y
Sbjct: 135 MLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMM--TPYVVTRY-Y 191
Query: 199 MSPEYAIQGIFSIKSDVFSFGVLLLKIVSGK 229
+PE + + D++S G ++ ++V K
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 60/122 (49%), Gaps = 14/122 (11%)
Query: 142 YLHQYSRVRIIHRDLKVSNILL---DKDMNPKISDFGIARICRGNELQANTGRIVGTYRY 198
YLH+ IIHRDLK N+LL ++D KI+DFG ++I L + GT Y
Sbjct: 268 YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT---LCGTPTY 321
Query: 199 MSPEYAIQ---GIFSIKSDVFSFGVLLLKIVSGKKTTGFYRTYSFTLLGYISENIYEF-P 254
++PE + ++ D +S GV+L +SG +RT +L I+ Y F P
Sbjct: 322 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT-QVSLKDQITSGKYNFIP 380
Query: 255 SV 256
V
Sbjct: 381 EV 382
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 91/211 (43%), Gaps = 29/211 (13%)
Query: 42 SVSTATNKFSDANKLGEGGFGPV---YKGVLKNGDEIAVKRLSGRSGQGLRELKNKLR-- 96
S T ++ + +G G G V Y VL +A+K+LS R Q K R
Sbjct: 18 STFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLS-RPFQNQTHAKRAYREL 74
Query: 97 -LLGCCIDKDEKILIYEYMPNKSLDFF--------LFD----WVTRVRIIEGIAQGLLY- 142
L+ K+ L+ + P K+L+ F L D V ++ + LLY
Sbjct: 75 VLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQ 134
Query: 143 ----LHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRY 198
+ IIHRDLK SNI++ D KI DFG+AR + + T +V Y Y
Sbjct: 135 MLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMM--TPYVVTRY-Y 191
Query: 199 MSPEYAIQGIFSIKSDVFSFGVLLLKIVSGK 229
+PE + + D++S G ++ ++V K
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 15/100 (15%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNIL-LDKDMNP---KISDFGIARICRGNELQANTGR 191
I + + YLH ++HRDLK SNIL +D+ NP +I DFG A+ +L+A G
Sbjct: 125 ITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAK-----QLRAENGL 176
Query: 192 IVG---TYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
+ T +++PE + + D++S GVLL ++G
Sbjct: 177 LXTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTG 216
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 107/234 (45%), Gaps = 40/234 (17%)
Query: 50 FSDANKLGEGGFGPVYKGVLKN-GDEIAVKRL------SGRSGQGLRELKNKLRLLGCCI 102
+ +LG G F V K K+ G + A K + S R G +++ ++ +L I
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE-I 71
Query: 103 DKDEKILIYEYMPNKS-----LDFF----LFDWVTR---------VRIIEGIAQGLLYLH 144
I ++E NK+ L+ LFD++ ++ I G+ YLH
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 145 QYSRVRIIHRDLKVSNI-LLDKDM-NPKIS--DFGIA-RICRGNELQANTGRIVGTYRYM 199
++I H DLK NI LLD+++ P+I DFG+A +I GNE + I GT ++
Sbjct: 132 S---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK----NIFGTPAFV 184
Query: 200 SPEYAIQGIFSIKSDVFSFGVLLLKIVSGKKTTGFYRTYSFTLLGYISENIYEF 253
+PE +++D++S GV+ ++SG + F L +S YEF
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSG--ASPFLGDTKQETLANVSAVNYEF 236
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 55/109 (50%), Gaps = 16/109 (14%)
Query: 131 RIIEGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIAR-ICRGNEL---- 185
R+ I + L Y+H IIHRDLK NI +D+ N KI DFG+A+ + R ++
Sbjct: 120 RLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLD 176
Query: 186 -------QANTGRIVGTYRYMSPEYAI-QGIFSIKSDVFSFGVLLLKIV 226
N +GT Y++ E G ++ K D++S G++ +++
Sbjct: 177 SQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 55/109 (50%), Gaps = 16/109 (14%)
Query: 131 RIIEGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIAR-ICRGNEL---- 185
R+ I + L Y+H IIHRDLK NI +D+ N KI DFG+A+ + R ++
Sbjct: 120 RLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLD 176
Query: 186 -------QANTGRIVGTYRYMSPEYAI-QGIFSIKSDVFSFGVLLLKIV 226
N +GT Y++ E G ++ K D++S G++ +++
Sbjct: 177 SQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 67/128 (52%), Gaps = 12/128 (9%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFG-IARICRGNELQANTGRIVG 194
+A+ ++ + ++ +HRD+K NIL+D + + +++DFG ++ +Q++ VG
Sbjct: 181 LAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVA--VG 238
Query: 195 TYRYMSPEY-----AIQGIFSIKSDVFSFGVLLLKIVSGKKTTGFYRTYSFTLLGYI--S 247
T Y+SPE +G + + D +S GV + +++ G+ T FY G I
Sbjct: 239 TPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGE--TPFYAESLVETYGKIMNH 296
Query: 248 ENIYEFPS 255
+ ++FP+
Sbjct: 297 KERFQFPT 304
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 53/95 (55%), Gaps = 3/95 (3%)
Query: 136 IAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGT 195
+ + +L L ++ II+RD+K+ NILLD + + ++DFG+++ +E + GT
Sbjct: 165 VGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETE-RAYDFCGT 223
Query: 196 YRYMSPEYAIQGI--FSIKSDVFSFGVLLLKIVSG 228
YM+P+ G D +S GVL+ ++++G
Sbjct: 224 IEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTG 258
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 83/203 (40%), Gaps = 36/203 (17%)
Query: 54 NKLGEGGFGPVYKGVLKNGD----EIAVKRLSG-------------RSGQGLREL--KNK 94
KLG+G FG V +G +AVK L R + L +N
Sbjct: 18 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 77
Query: 95 LRLLGCCIDKDEKILIYEYMPNKSL--------DFFLFDWVTRVRIIEGIAQGLLYLHQY 146
+RL G + K ++ E P SL FL ++R + +A+G+ YL
Sbjct: 78 IRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESK 134
Query: 147 SRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQ--ANTGRIVGTYRYMSPEYA 204
R IHRDL N+LL KI DFG+ R N+ R V + + +PE
Sbjct: 135 ---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV-PFAWCAPESL 190
Query: 205 IQGIFSIKSDVFSFGVLLLKIVS 227
FS SD + FGV L ++ +
Sbjct: 191 KTRTFSHASDTWMFGVTLWEMFT 213
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 83/203 (40%), Gaps = 36/203 (17%)
Query: 54 NKLGEGGFGPVYKGVLKNGD----EIAVKRLSG-------------RSGQGLREL--KNK 94
KLG+G FG V +G +AVK L R + L +N
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 95 LRLLGCCIDKDEKILIYEYMPNKSL--------DFFLFDWVTRVRIIEGIAQGLLYLHQY 146
+RL G + K ++ E P SL FL ++R + +A+G+ YL
Sbjct: 74 IRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESK 130
Query: 147 SRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQA--NTGRIVGTYRYMSPEYA 204
R IHRDL N+LL KI DFG+ R N+ R V + + +PE
Sbjct: 131 ---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKV-PFAWCAPESL 186
Query: 205 IQGIFSIKSDVFSFGVLLLKIVS 227
FS SD + FGV L ++ +
Sbjct: 187 KTRTFSHASDTWMFGVTLWEMFT 209
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 83/203 (40%), Gaps = 36/203 (17%)
Query: 54 NKLGEGGFGPVYKGVLKNGD----EIAVKRLSG-------------RSGQGLREL--KNK 94
KLG+G FG V +G +AVK L R + L +N
Sbjct: 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 95 LRLLGCCIDKDEKILIYEYMPNKSL--------DFFLFDWVTRVRIIEGIAQGLLYLHQY 146
+RL G + K ++ E P SL FL ++R + +A+G+ YL
Sbjct: 84 IRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESK 140
Query: 147 SRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQA--NTGRIVGTYRYMSPEYA 204
R IHRDL N+LL KI DFG+ R N+ R V + + +PE
Sbjct: 141 ---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKV-PFAWCAPESL 196
Query: 205 IQGIFSIKSDVFSFGVLLLKIVS 227
FS SD + FGV L ++ +
Sbjct: 197 KTRTFSHASDTWMFGVTLWEMFT 219
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 83/203 (40%), Gaps = 36/203 (17%)
Query: 54 NKLGEGGFGPVYKGVLKNGD----EIAVKRLSG-------------RSGQGLREL--KNK 94
KLG+G FG V +G +AVK L R + L +N
Sbjct: 18 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 77
Query: 95 LRLLGCCIDKDEKILIYEYMPNKSL--------DFFLFDWVTRVRIIEGIAQGLLYLHQY 146
+RL G + K ++ E P SL FL ++R + +A+G+ YL
Sbjct: 78 IRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESK 134
Query: 147 SRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQ--ANTGRIVGTYRYMSPEYA 204
R IHRDL N+LL KI DFG+ R N+ R V + + +PE
Sbjct: 135 ---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV-PFAWCAPESL 190
Query: 205 IQGIFSIKSDVFSFGVLLLKIVS 227
FS SD + FGV L ++ +
Sbjct: 191 KTRTFSHASDTWMFGVTLWEMFT 213
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 96/218 (44%), Gaps = 49/218 (22%)
Query: 50 FSDANKLGEGGFGPVYKGVLKNGDEI-AVK--RLSGRSGQGLRELKNKLRLLGCCIDKDE 106
+S ++G GG V++ VL +I A+K L Q L +N++ L +
Sbjct: 11 YSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 69
Query: 107 KIL---------IYEYMPNKSLDFFLFDWVTRVRIIE---------GIAQGLLYLHQYSR 148
KI+ Y YM + + L W+ + + I+ + + + +HQ+
Sbjct: 70 KIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG- 128
Query: 149 VRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIV-----GTYRYMSPEY 203
I+H DLK +N L+ M K+ DFGIA N++Q +T +V GT YM PE
Sbjct: 129 --IVHSDLKPANFLIVDGM-LKLIDFGIA-----NQMQPDTTSVVKDSQVGTVNYMPPE- 179
Query: 204 AIQGIFSIKS------------DVFSFGVLLLKIVSGK 229
AI+ + S + DV+S G +L + GK
Sbjct: 180 AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 217
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 96/218 (44%), Gaps = 49/218 (22%)
Query: 50 FSDANKLGEGGFGPVYKGVLKNGDEI-AVK--RLSGRSGQGLRELKNKLRLLGCCIDKDE 106
+S ++G GG V++ VL +I A+K L Q L +N++ L +
Sbjct: 58 YSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 116
Query: 107 KIL---------IYEYMPNKSLDFFLFDWVTRVRIIE---------GIAQGLLYLHQYSR 148
KI+ Y YM + + L W+ + + I+ + + + +HQ+
Sbjct: 117 KIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG- 175
Query: 149 VRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIV-----GTYRYMSPEY 203
I+H DLK +N L+ M K+ DFGIA N++Q +T +V GT YM PE
Sbjct: 176 --IVHSDLKPANFLIVDGM-LKLIDFGIA-----NQMQPDTTSVVKDSQVGTVNYMPPE- 226
Query: 204 AIQGIFSIKS------------DVFSFGVLLLKIVSGK 229
AI+ + S + DV+S G +L + GK
Sbjct: 227 AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 264
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 83/203 (40%), Gaps = 36/203 (17%)
Query: 54 NKLGEGGFGPVYKGVLKNGD----EIAVKRLSG-------------RSGQGLREL--KNK 94
KLG+G FG V +G +AVK L R + L +N
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 95 LRLLGCCIDKDEKILIYEYMPNKSL--------DFFLFDWVTRVRIIEGIAQGLLYLHQY 146
+RL G + K ++ E P SL FL ++R + +A+G+ YL
Sbjct: 74 IRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESK 130
Query: 147 SRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQ--ANTGRIVGTYRYMSPEYA 204
R IHRDL N+LL KI DFG+ R N+ R V + + +PE
Sbjct: 131 ---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV-PFAWCAPESL 186
Query: 205 IQGIFSIKSDVFSFGVLLLKIVS 227
FS SD + FGV L ++ +
Sbjct: 187 KTRTFSHASDTWMFGVTLWEMFT 209
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 83/203 (40%), Gaps = 36/203 (17%)
Query: 54 NKLGEGGFGPVYKGVLKNGD----EIAVKRLSG-------------RSGQGLREL--KNK 94
KLG+G FG V +G +AVK L R + L +N
Sbjct: 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 95 LRLLGCCIDKDEKILIYEYMPNKSL--------DFFLFDWVTRVRIIEGIAQGLLYLHQY 146
+RL G + K ++ E P SL FL ++R + +A+G+ YL
Sbjct: 84 IRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESK 140
Query: 147 SRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQ--ANTGRIVGTYRYMSPEYA 204
R IHRDL N+LL KI DFG+ R N+ R V + + +PE
Sbjct: 141 ---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV-PFAWCAPESL 196
Query: 205 IQGIFSIKSDVFSFGVLLLKIVS 227
FS SD + FGV L ++ +
Sbjct: 197 KTRTFSHASDTWMFGVTLWEMFT 219
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 96/224 (42%), Gaps = 47/224 (20%)
Query: 43 VSTATNKFSDANKLGEGGFGPVYKGVLKNGDEIAVK--RLSGRSGQGLRELKNKLRLLGC 100
+S +S ++G GG V++ + + A+K L Q L +N++ L
Sbjct: 7 ISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNK 66
Query: 101 CIDKDEKIL---------IYEYMPNKSLDFFLFDWVTRVRIIE---------GIAQGLLY 142
+KI+ Y YM + + L W+ + + I+ + + +
Sbjct: 67 LQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHT 126
Query: 143 LHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIV-----GTYR 197
+HQ+ I+H DLK +N L+ M K+ DFGIA N++Q +T +V GT
Sbjct: 127 IHQHG---IVHSDLKPANFLIVDGM-LKLIDFGIA-----NQMQPDTTSVVKDSQVGTVN 177
Query: 198 YMSPEYAIQGIFSIKS------------DVFSFGVLLLKIVSGK 229
YM PE AI+ + S + DV+S G +L + GK
Sbjct: 178 YMPPE-AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 220
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 83/203 (40%), Gaps = 36/203 (17%)
Query: 54 NKLGEGGFGPVYKGVLKNGD----EIAVKRLSG-------------RSGQGLREL--KNK 94
KLG+G FG V +G +AVK L R + L +N
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 95 LRLLGCCIDKDEKILIYEYMPNKSL--------DFFLFDWVTRVRIIEGIAQGLLYLHQY 146
+RL G + K ++ E P SL FL ++R + +A+G+ YL
Sbjct: 74 IRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESK 130
Query: 147 SRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQ--ANTGRIVGTYRYMSPEYA 204
R IHRDL N+LL KI DFG+ R N+ R V + + +PE
Sbjct: 131 ---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV-PFAWCAPESL 186
Query: 205 IQGIFSIKSDVFSFGVLLLKIVS 227
FS SD + FGV L ++ +
Sbjct: 187 KTRTFSHASDTWMFGVTLWEMFT 209
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 96/218 (44%), Gaps = 49/218 (22%)
Query: 50 FSDANKLGEGGFGPVYKGVLKNGDEI-AVK--RLSGRSGQGLRELKNKLRLLGCCIDKDE 106
+S ++G GG V++ VL +I A+K L Q L +N++ L +
Sbjct: 58 YSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 116
Query: 107 KIL---------IYEYMPNKSLDFFLFDWVTRVRIIE---------GIAQGLLYLHQYSR 148
KI+ Y YM + + L W+ + + I+ + + + +HQ+
Sbjct: 117 KIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG- 175
Query: 149 VRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIV-----GTYRYMSPEY 203
I+H DLK +N L+ M K+ DFGIA N++Q +T +V GT YM PE
Sbjct: 176 --IVHSDLKPANFLIVDGM-LKLIDFGIA-----NQMQPDTTSVVKDSQVGTVNYMPPE- 226
Query: 204 AIQGIFSIKS------------DVFSFGVLLLKIVSGK 229
AI+ + S + DV+S G +L + GK
Sbjct: 227 AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 264
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 60/132 (45%), Gaps = 17/132 (12%)
Query: 109 LIYEYMPNKSLDF---------FLFDWVTRVRIIEGIAQGLLYLHQYSRVRIIHRDLKVS 159
+++E+M L F F++ + I + L Y H + IIHRD+K
Sbjct: 105 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN---IIHRDVKPH 161
Query: 160 NILLDKDMNP---KISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVF 216
+LL N K+ FG+A I G GR VGT +M+PE + + DV+
Sbjct: 162 CVLLASKENSAPVKLGGFGVA-IQLGESGLVAGGR-VGTPHFMAPEVVKREPYGKPVDVW 219
Query: 217 SFGVLLLKIVSG 228
GV+L ++SG
Sbjct: 220 GCGVILFILLSG 231
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 98/225 (43%), Gaps = 49/225 (21%)
Query: 43 VSTATNKFSDANKLGEGGFGPVYKGVLKNGDEI-AVK--RLSGRSGQGLRELKNKLRLLG 99
+S +S ++G GG V++ VL +I A+K L Q L +N++ L
Sbjct: 3 ISVKGRIYSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLN 61
Query: 100 CCIDKDEKIL---------IYEYMPNKSLDFFLFDWVTRVRIIE---------GIAQGLL 141
+KI+ Y YM + + L W+ + + I+ + + +
Sbjct: 62 KLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVH 121
Query: 142 YLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIV-----GTY 196
+HQ+ I+H DLK +N L+ M K+ DFGIA N++Q +T +V GT
Sbjct: 122 TIHQHG---IVHSDLKPANFLIVDGM-LKLIDFGIA-----NQMQPDTTSVVKDSQVGTV 172
Query: 197 RYMSPEYAIQGIFSIKS------------DVFSFGVLLLKIVSGK 229
YM PE AI+ + S + DV+S G +L + GK
Sbjct: 173 NYMPPE-AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 216
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 60/132 (45%), Gaps = 17/132 (12%)
Query: 109 LIYEYMPNKSLDF---------FLFDWVTRVRIIEGIAQGLLYLHQYSRVRIIHRDLKVS 159
+++E+M L F F++ + I + L Y H + IIHRD+K
Sbjct: 103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN---IIHRDVKPH 159
Query: 160 NILLDKDMNP---KISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIKSDVF 216
+LL N K+ FG+A I G GR VGT +M+PE + + DV+
Sbjct: 160 CVLLASKENSAPVKLGGFGVA-IQLGESGLVAGGR-VGTPHFMAPEVVKREPYGKPVDVW 217
Query: 217 SFGVLLLKIVSG 228
GV+L ++SG
Sbjct: 218 GCGVILFILLSG 229
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 109/273 (39%), Gaps = 59/273 (21%)
Query: 42 SVSTATNKFSDANKL-----GEGGFGPVYKGV-LKNGDEIAVKRLSGRSGQGLRELKNKL 95
S + + +F D +L GEG V + L E AVK + + G + ++
Sbjct: 2 STDSFSGRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREV 61
Query: 96 RLLGCC-------------IDKDEKILIYEYMPNKSLDFFL-----FDWVTRVRIIEGIA 137
+L C ++D L++E M S+ + F+ + +++ +A
Sbjct: 62 EMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVA 121
Query: 138 QGLLYLHQYSRVRIIHRDLKVSNILLDK--DMNP-KISDFGIARICRGNELQANTGRI-- 192
L +LH I HRDLK NIL + ++P KI DF + G +L + I
Sbjct: 122 SALDFLHNKG---IAHRDLKPENILCEHPNQVSPVKICDFDLG---SGIKLNGDCSPIST 175
Query: 193 ------VGTYRYMSPEYA-----IQGIFSIKSDVFSFGVLLLKIVSG--------KKTTG 233
G+ YM+PE I+ + D++S GV+L ++SG G
Sbjct: 176 PELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCG 235
Query: 234 FYRTYSFT-----LLGYISENIYEFPSVDTHNV 261
+ R + L I E YEFP D ++
Sbjct: 236 WDRGEACPACQNMLFESIQEGKYEFPDKDWAHI 268
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 108/242 (44%), Gaps = 50/242 (20%)
Query: 48 NKFSDANKLGEGGFGPVYKGVLKNGDE-IAVKRLSGRSGQ----GLRELKNKLRL----- 97
+++ D LG GG G V+ V + D+ +A+K++ Q LRE+K RL
Sbjct: 11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNI 70
Query: 98 -----------------LGCCIDKDEKILIYEYMPNKSLDFF----LFDWVTRVRIIEGI 136
+G + + ++ EYM + L + R+ + + +
Sbjct: 71 VKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEHARLFMYQ-L 129
Query: 137 AQGLLYLHQYSRVRIIHRDLKVSNILLD-KDMNPKISDFGIARICR---GNELQANTGRI 192
+GL Y+H ++HRDLK +N+ ++ +D+ KI DFG+ARI ++ + G +
Sbjct: 130 LRGLKYIHS---ANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLV 186
Query: 193 VGTYR----YMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGKKTTGFYRTYSFTLLGYISE 248
YR +SP + I D+++ G + ++++GK T F + + I E
Sbjct: 187 TKWYRSPRLLLSPNNYTKAI-----DMWAAGCIFAEMLTGK--TLFAGAHELEQMQLILE 239
Query: 249 NI 250
+I
Sbjct: 240 SI 241
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 9/99 (9%)
Query: 133 IEGIAQGLLYLHQYSRVRIIHRDLKVSNILL---DKDMNPKISDFGIARICRGNELQANT 189
++ I + + YLH+ I+HRDLK N+L D KI+DFG+++I E Q
Sbjct: 154 VKQILEAVAYLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKIV---EHQVLM 207
Query: 190 GRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
+ GT Y +PE + + D++S G++ ++ G
Sbjct: 208 KTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCG 246
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 55/104 (52%), Gaps = 8/104 (7%)
Query: 138 QGLLYLHQYSRVRIIHRDLKVSNILLDKDMN-PKISDFGIARICRGNELQAN--TGR-IV 193
+GL YLH RI+H D+K N+LL D + + DFG A + + L + TG I
Sbjct: 161 EGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIP 217
Query: 194 GTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG-KKTTGFYR 236
GT +M+PE + K D++S ++L +++G T ++R
Sbjct: 218 GTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFR 261
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 55/104 (52%), Gaps = 8/104 (7%)
Query: 138 QGLLYLHQYSRVRIIHRDLKVSNILLDKDMN-PKISDFGIARICRGNELQAN--TGR-IV 193
+GL YLH RI+H D+K N+LL D + + DFG A + + L + TG I
Sbjct: 177 EGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIP 233
Query: 194 GTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG-KKTTGFYR 236
GT +M+PE + K D++S ++L +++G T ++R
Sbjct: 234 GTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFR 277
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 55/104 (52%), Gaps = 8/104 (7%)
Query: 138 QGLLYLHQYSRVRIIHRDLKVSNILLDKDMN-PKISDFGIARICRGNELQAN--TGR-IV 193
+GL YLH RI+H D+K N+LL D + + DFG A + + L + TG I
Sbjct: 175 EGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIP 231
Query: 194 GTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG-KKTTGFYR 236
GT +M+PE + K D++S ++L +++G T ++R
Sbjct: 232 GTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFR 275
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 61/127 (48%), Gaps = 17/127 (13%)
Query: 139 GLLYLHQYSRVRIIHRDLKVSNILLDKDMNP------KISDFGIARICRGNELQANTGRI 192
GL Y+H+ R IIH D+K N+L++ +P KI+D G A C +E N+
Sbjct: 143 GLDYMHR--RCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNA--CWYDEHYTNS--- 195
Query: 193 VGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG----KKTTGFYRTYSFTLLGYISE 248
+ T Y SPE + + +D++S L+ ++++G + G T + I E
Sbjct: 196 IQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIE 255
Query: 249 NIYEFPS 255
+ E PS
Sbjct: 256 LLGELPS 262
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 61/127 (48%), Gaps = 17/127 (13%)
Query: 139 GLLYLHQYSRVRIIHRDLKVSNILLDKDMNP------KISDFGIARICRGNELQANTGRI 192
GL Y+H+ R IIH D+K N+L++ +P KI+D G A C +E N+
Sbjct: 143 GLDYMHR--RCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNA--CWYDEHYTNS--- 195
Query: 193 VGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG----KKTTGFYRTYSFTLLGYISE 248
+ T Y SPE + + +D++S L+ ++++G + G T + I E
Sbjct: 196 IQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIE 255
Query: 249 NIYEFPS 255
+ E PS
Sbjct: 256 LLGELPS 262
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 89/205 (43%), Gaps = 34/205 (16%)
Query: 48 NKFSDANKLGEGGFGPVYKGV--------------LKNGDEIAVKRLSGRSGQGLRELKN 93
K+ A LG G FG V++ V +K D++ VK+ S + +N
Sbjct: 5 EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKK--EISILNIARHRN 62
Query: 94 KLRLLGCCIDKDEKILIYEYMPNKSLDFF------LFDWVTR--VRIIEGIAQGLLYLHQ 145
L L +E ++I+E++ LD F F+ R V + + + L +LH
Sbjct: 63 ILHLHESFESMEELVMIFEFISG--LDIFERINTSAFELNEREIVSYVHQVCEALQFLHS 120
Query: 146 YSRVRIIHRDLKVSNILLD--KDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEY 203
++ I H D++ NI+ + KI +FG AR + + N + Y +PE
Sbjct: 121 HN---IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD---NFRLLFTAPEYYAPEV 174
Query: 204 AIQGIFSIKSDVFSFGVLLLKIVSG 228
+ S +D++S G L+ ++SG
Sbjct: 175 HQHDVVSTATDMWSLGTLVYVLLSG 199
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 139 GLLYLHQYSRVRIIHRDLKVSNILLDKDMNP--KISDFGIARICRGNELQANTGRIVGTY 196
G+ Y H +++ HRDLK+ N LLD P KI FG + + + L + VGT
Sbjct: 127 GVSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICAFGYS---KSSVLHSQPKSTVGTP 180
Query: 197 RYMSPEYAIQGIFSIK-SDVFSFGVLLLKIVSG 228
Y++PE ++ + K +DV+S GV L ++ G
Sbjct: 181 AYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 95/218 (43%), Gaps = 49/218 (22%)
Query: 50 FSDANKLGEGGFGPVYKGVLKNGDEI-AVK--RLSGRSGQGLRELKNKLRLLGCCIDKDE 106
+S ++G GG V++ VL +I A+K L Q L +N++ L +
Sbjct: 58 YSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 116
Query: 107 KIL---------IYEYMPNKSLDFFLFDWVTRVRIIE---------GIAQGLLYLHQYSR 148
KI+ Y YM + + L W+ + + I+ + + + +HQ+
Sbjct: 117 KIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG- 175
Query: 149 VRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIV-----GTYRYMSPEY 203
I+H DLK +N L+ M K+ DFGIA N++Q +T +V G YM PE
Sbjct: 176 --IVHSDLKPANFLIVDGM-LKLIDFGIA-----NQMQPDTTSVVKDSQVGAVNYMPPE- 226
Query: 204 AIQGIFSIKS------------DVFSFGVLLLKIVSGK 229
AI+ + S + DV+S G +L + GK
Sbjct: 227 AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 264
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 139 GLLYLHQYSRVRIIHRDLKVSNILLDKDMNP--KISDFGIARICRGNELQANTGRIVGTY 196
G+ Y H +++ HRDLK+ N LLD P KI FG + + + L + VGT
Sbjct: 127 GVSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICAFGYS---KSSVLHSQPKDTVGTP 180
Query: 197 RYMSPEYAIQGIFSIK-SDVFSFGVLLLKIVSG 228
Y++PE ++ + K +DV+S GV L ++ G
Sbjct: 181 AYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 53/109 (48%), Gaps = 16/109 (14%)
Query: 131 RIIEGIAQGLLYLHQYSRVRIIHRDLKVSNILLDKDMNPKISDFGIAR-ICRGNEL---- 185
R+ I + L Y+H IIHR+LK NI +D+ N KI DFG+A+ + R ++
Sbjct: 120 RLFRQILEALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLD 176
Query: 186 -------QANTGRIVGTYRYMSPEYAI-QGIFSIKSDVFSFGVLLLKIV 226
N +GT Y++ E G ++ K D +S G++ + +
Sbjct: 177 SQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 95/215 (44%), Gaps = 45/215 (20%)
Query: 54 NKLGEGGFGPV--YKGVLKNGDEIAVKRLSGRSGQGLRELK------------NKLRLLG 99
KLGEGGF V +G L +G A+KR+ Q E + N LRL+
Sbjct: 35 QKLGEGGFSYVDLVEG-LHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVA 93
Query: 100 CCI----DKDEKILIYEYMPNKSL-----------DFFLFDWVTRVRIIEGIAQGLLYLH 144
C+ K E L+ + +L +F D + + ++ GI +GL +H
Sbjct: 94 YCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQI--LWLLLGICRGLEAIH 151
Query: 145 QYSRVRIIHRDLKVSNILLDKDMNPKISDFG-IARICRGNE--LQANTGRIVGTYR---- 197
HRDLK +NILL + P + D G + + C E QA T + R
Sbjct: 152 AKGYA---HRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTIS 208
Query: 198 YMSPE-YAIQG--IFSIKSDVFSFGVLLLKIVSGK 229
Y +PE +++Q + ++DV+S G +L ++ G+
Sbjct: 209 YRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGE 243
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 89/205 (43%), Gaps = 41/205 (20%)
Query: 55 KLGEGGFGPVYKGVLKNGD------EIAVKRLSGRSGQGLRELKNKLRLLGC-------- 100
++G G F VYKG+ E+ ++L+ Q +E L+ L
Sbjct: 33 EIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYD 92
Query: 101 ----------CIDKDEKILIYEYMPNKSLDFFLFDW-VTRVRIIEG----IAQGLLYLHQ 145
CI +L+ E + +L +L + V +++++ I +GL +LH
Sbjct: 93 SWESTVKGKKCI-----VLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKGLQFLHT 147
Query: 146 YSRVRIIHRDLKVSNILLDKDMNP-KISDFGIARICRGNELQANTGRIVGTYRYMSPEYA 204
+ IIHRDLK NI + KI D G+A + R + +A ++GT + +PE
Sbjct: 148 RTPP-IIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKA----VIGTPEFXAPE-X 201
Query: 205 IQGIFSIKSDVFSFGVLLLKIVSGK 229
+ + DV++FG L+ + +
Sbjct: 202 YEEKYDESVDVYAFGXCXLEXATSE 226
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 10/102 (9%)
Query: 130 VRIIEGIAQGLLYLHQYSRVRIIHRDLKVSNILL---DKDMNPKISDFGIARICRGNELQ 186
I+ I + +LH ++ I HRD+K N+L +KD K++DFG A+ N LQ
Sbjct: 112 AEIMRDIGTAIQFLHSHN---IAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQ 168
Query: 187 ANTGRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
T Y++PE + D++S GV++ ++ G
Sbjct: 169 TP----CYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 206
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 10/102 (9%)
Query: 130 VRIIEGIAQGLLYLHQYSRVRIIHRDLKVSNILL---DKDMNPKISDFGIARICRGNELQ 186
I+ I + +LH ++ I HRD+K N+L +KD K++DFG A+ N LQ
Sbjct: 131 AEIMRDIGTAIQFLHSHN---IAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQ 187
Query: 187 ANTGRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
T Y++PE + D++S GV++ ++ G
Sbjct: 188 TP----CYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 225
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 84/202 (41%), Gaps = 36/202 (17%)
Query: 56 LGEGGFGPVYKGV-LKNGDEIAVKRLSGRSGQGLRELKNK-------------------- 94
LG GGFG VY G+ + + +A+K + EL N
Sbjct: 59 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 118
Query: 95 LRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVT-RVRIIEGIAQGLLY-----LHQYSR 148
+RLL D +LI E P D LFD++T R + E +A+ + +
Sbjct: 119 IRLLDWFERPDSFVLILE-RPEPVQD--LFDFITERGALQEELARSFFWQVLEAVRHCHN 175
Query: 149 VRIIHRDLKVSNILLDKDMNP-KISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQG 207
++HRD+K NIL+D + K+ DFG + + GT Y PE+
Sbjct: 176 CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD----FDGTRVYSPPEWIRYH 231
Query: 208 IFSIKS-DVFSFGVLLLKIVSG 228
+ +S V+S G+LL +V G
Sbjct: 232 RYHGRSAAVWSLGILLYDMVCG 253
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 84/202 (41%), Gaps = 36/202 (17%)
Query: 56 LGEGGFGPVYKGV-LKNGDEIAVKRLSGRSGQGLRELKNK-------------------- 94
LG GGFG VY G+ + + +A+K + EL N
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 95 LRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVT-RVRIIEGIAQGLLY-----LHQYSR 148
+RLL D +LI E P D LFD++T R + E +A+ + +
Sbjct: 105 IRLLDWFERPDSFVLILE-RPEPVQD--LFDFITERGALQEELARSFFWQVLEAVRHCHN 161
Query: 149 VRIIHRDLKVSNILLDKDMNP-KISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQG 207
++HRD+K NIL+D + K+ DFG + + GT Y PE+
Sbjct: 162 CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD----FDGTRVYSPPEWIRYH 217
Query: 208 IFSIKS-DVFSFGVLLLKIVSG 228
+ +S V+S G+LL +V G
Sbjct: 218 RYHGRSAAVWSLGILLYDMVCG 239
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 84/202 (41%), Gaps = 36/202 (17%)
Query: 56 LGEGGFGPVYKGV-LKNGDEIAVKRLSGRSGQGLRELKNK-------------------- 94
LG GGFG VY G+ + + +A+K + EL N
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 95 LRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVT-RVRIIEGIAQGLLY-----LHQYSR 148
+RLL D +LI E P D LFD++T R + E +A+ + +
Sbjct: 105 IRLLDWFERPDSFVLILE-RPEPVQD--LFDFITERGALQEELARSFFWQVLEAVRHCHN 161
Query: 149 VRIIHRDLKVSNILLDKDMNP-KISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQG 207
++HRD+K NIL+D + K+ DFG + + GT Y PE+
Sbjct: 162 CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD----FDGTRVYSPPEWIRYH 217
Query: 208 IFSIKS-DVFSFGVLLLKIVSG 228
+ +S V+S G+LL +V G
Sbjct: 218 RYHGRSAAVWSLGILLYDMVCG 239
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 84/202 (41%), Gaps = 36/202 (17%)
Query: 56 LGEGGFGPVYKGV-LKNGDEIAVKRLSGRSGQGLRELKNK-------------------- 94
LG GGFG VY G+ + + +A+K + EL N
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 95 LRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVT-RVRIIEGIAQGLLY-----LHQYSR 148
+RLL D +LI E P D LFD++T R + E +A+ + +
Sbjct: 104 IRLLDWFERPDSFVLILE-RPEPVQD--LFDFITERGALQEELARSFFWQVLEAVRHCHN 160
Query: 149 VRIIHRDLKVSNILLDKDMNP-KISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQG 207
++HRD+K NIL+D + K+ DFG + + GT Y PE+
Sbjct: 161 CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD----FDGTRVYSPPEWIRYH 216
Query: 208 IFSIKS-DVFSFGVLLLKIVSG 228
+ +S V+S G+LL +V G
Sbjct: 217 RYHGRSAAVWSLGILLYDMVCG 238
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 84/202 (41%), Gaps = 36/202 (17%)
Query: 56 LGEGGFGPVYKGV-LKNGDEIAVKRLSGRSGQGLRELKNK-------------------- 94
LG GGFG VY G+ + + +A+K + EL N
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 95 LRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVT-RVRIIEGIAQGLLY-----LHQYSR 148
+RLL D +LI E P D LFD++T R + E +A+ + +
Sbjct: 105 IRLLDWFERPDSFVLILE-RPEPVQD--LFDFITERGALQEELARSFFWQVLEAVRHCHN 161
Query: 149 VRIIHRDLKVSNILLDKDMNP-KISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQG 207
++HRD+K NIL+D + K+ DFG + + GT Y PE+
Sbjct: 162 CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD----FDGTRVYSPPEWIRYH 217
Query: 208 IFSIKS-DVFSFGVLLLKIVSG 228
+ +S V+S G+LL +V G
Sbjct: 218 RYHGRSAAVWSLGILLYDMVCG 239
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 84/202 (41%), Gaps = 36/202 (17%)
Query: 56 LGEGGFGPVYKGV-LKNGDEIAVKRLSGRSGQGLRELKNK-------------------- 94
LG GGFG VY G+ + + +A+K + EL N
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 95 LRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVT-RVRIIEGIAQGLLY-----LHQYSR 148
+RLL D +LI E P D LFD++T R + E +A+ + +
Sbjct: 105 IRLLDWFERPDSFVLILE-RPEPVQD--LFDFITERGALQEELARSFFWQVLEAVRHCHN 161
Query: 149 VRIIHRDLKVSNILLDKDMNP-KISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQG 207
++HRD+K NIL+D + K+ DFG + + GT Y PE+
Sbjct: 162 CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD----FDGTRVYSPPEWIRYH 217
Query: 208 IFSIKS-DVFSFGVLLLKIVSG 228
+ +S V+S G+LL +V G
Sbjct: 218 RYHGRSAAVWSLGILLYDMVCG 239
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 84/202 (41%), Gaps = 36/202 (17%)
Query: 56 LGEGGFGPVYKGV-LKNGDEIAVKRLSGRSGQGLRELKNK-------------------- 94
LG GGFG VY G+ + + +A+K + EL N
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 90
Query: 95 LRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVT-RVRIIEGIAQGLLY-----LHQYSR 148
+RLL D +LI E P D LFD++T R + E +A+ + +
Sbjct: 91 IRLLDWFERPDSFVLILE-RPEPVQD--LFDFITERGALQEELARSFFWQVLEAVRHCHN 147
Query: 149 VRIIHRDLKVSNILLDKDMNP-KISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQG 207
++HRD+K NIL+D + K+ DFG + + GT Y PE+
Sbjct: 148 CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD----FDGTRVYSPPEWIRYH 203
Query: 208 IFSIKS-DVFSFGVLLLKIVSG 228
+ +S V+S G+LL +V G
Sbjct: 204 RYHGRSAAVWSLGILLYDMVCG 225
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 84/202 (41%), Gaps = 36/202 (17%)
Query: 56 LGEGGFGPVYKGV-LKNGDEIAVKRLSGRSGQGLRELKNK-------------------- 94
LG GGFG VY G+ + + +A+K + EL N
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 95 LRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVT-RVRIIEGIAQGLLY-----LHQYSR 148
+RLL D +LI E P D LFD++T R + E +A+ + +
Sbjct: 104 IRLLDWFERPDSFVLILE-RPEPVQD--LFDFITERGALQEELARSFFWQVLEAVRHCHN 160
Query: 149 VRIIHRDLKVSNILLDKDMNP-KISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQG 207
++HRD+K NIL+D + K+ DFG + + GT Y PE+
Sbjct: 161 CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD----FDGTRVYSPPEWIRYH 216
Query: 208 IFSIKS-DVFSFGVLLLKIVSG 228
+ +S V+S G+LL +V G
Sbjct: 217 RYHGRSAAVWSLGILLYDMVCG 238
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 84/202 (41%), Gaps = 36/202 (17%)
Query: 56 LGEGGFGPVYKGV-LKNGDEIAVKRLSGRSGQGLRELKNK-------------------- 94
LG GGFG VY G+ + + +A+K + EL N
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 95 LRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVT-RVRIIEGIAQGLLY-----LHQYSR 148
+RLL D +LI E P D LFD++T R + E +A+ + +
Sbjct: 104 IRLLDWFERPDSFVLILE-RPEPVQD--LFDFITERGALQEELARSFFWQVLEAVRHCHN 160
Query: 149 VRIIHRDLKVSNILLDKDMNP-KISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQG 207
++HRD+K NIL+D + K+ DFG + + GT Y PE+
Sbjct: 161 CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD----FDGTRVYSPPEWIRYH 216
Query: 208 IFSIKS-DVFSFGVLLLKIVSG 228
+ +S V+S G+LL +V G
Sbjct: 217 RYHGRSAAVWSLGILLYDMVCG 238
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 84/202 (41%), Gaps = 36/202 (17%)
Query: 56 LGEGGFGPVYKGV-LKNGDEIAVKRLSGRSGQGLRELKNK-------------------- 94
LG GGFG VY G+ + + +A+K + EL N
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 90
Query: 95 LRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVT-RVRIIEGIAQGLLY-----LHQYSR 148
+RLL D +LI E P D LFD++T R + E +A+ + +
Sbjct: 91 IRLLDWFERPDSFVLILE-RPEPVQD--LFDFITERGALQEELARSFFWQVLEAVRHCHN 147
Query: 149 VRIIHRDLKVSNILLDKDMNP-KISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQG 207
++HRD+K NIL+D + K+ DFG + + GT Y PE+
Sbjct: 148 CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD----FDGTRVYSPPEWIRYH 203
Query: 208 IFSIKS-DVFSFGVLLLKIVSG 228
+ +S V+S G+LL +V G
Sbjct: 204 RYHGRSAAVWSLGILLYDMVCG 225
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 84/202 (41%), Gaps = 36/202 (17%)
Query: 56 LGEGGFGPVYKGV-LKNGDEIAVKRLSGRSGQGLRELKNK-------------------- 94
LG GGFG VY G+ + + +A+K + EL N
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 95 LRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVT-RVRIIEGIAQGLLY-----LHQYSR 148
+RLL D +LI E P D LFD++T R + E +A+ + +
Sbjct: 77 IRLLDWFERPDSFVLILE-RPEPVQD--LFDFITERGALQEELARSFFWQVLEAVRHCHN 133
Query: 149 VRIIHRDLKVSNILLDKDMNP-KISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQG 207
++HRD+K NIL+D + K+ DFG + + GT Y PE+
Sbjct: 134 CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD----FDGTRVYSPPEWIRYH 189
Query: 208 IFSIKS-DVFSFGVLLLKIVSG 228
+ +S V+S G+LL +V G
Sbjct: 190 RYHGRSAAVWSLGILLYDMVCG 211
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 84/202 (41%), Gaps = 36/202 (17%)
Query: 56 LGEGGFGPVYKGV-LKNGDEIAVKRLSGRSGQGLRELKNK-------------------- 94
LG GGFG VY G+ + + +A+K + EL N
Sbjct: 59 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 118
Query: 95 LRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVT-RVRIIEGIAQGLLY-----LHQYSR 148
+RLL D +LI E P D LFD++T R + E +A+ + +
Sbjct: 119 IRLLDWFERPDSFVLILE-RPEPVQD--LFDFITERGALQEELARSFFWQVLEAVRHCHN 175
Query: 149 VRIIHRDLKVSNILLDKDMNP-KISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQG 207
++HRD+K NIL+D + K+ DFG + + GT Y PE+
Sbjct: 176 CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD----FDGTRVYSPPEWIRYH 231
Query: 208 IFSIKS-DVFSFGVLLLKIVSG 228
+ +S V+S G+LL +V G
Sbjct: 232 RYHGRSAAVWSLGILLYDMVCG 253
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 84/202 (41%), Gaps = 36/202 (17%)
Query: 56 LGEGGFGPVYKGV-LKNGDEIAVKRLSGRSGQGLRELKNK-------------------- 94
LG GGFG VY G+ + + +A+K + EL N
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 95 LRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVT-RVRIIEGIAQGLLY-----LHQYSR 148
+RLL D +LI E P D LFD++T R + E +A+ + +
Sbjct: 104 IRLLDWFERPDSFVLILE-RPEPVQD--LFDFITERGALQEELARSFFWQVLEAVRHCHN 160
Query: 149 VRIIHRDLKVSNILLDKDMNP-KISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQG 207
++HRD+K NIL+D + K+ DFG + + GT Y PE+
Sbjct: 161 CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD----FDGTRVYSPPEWIRYH 216
Query: 208 IFSIKS-DVFSFGVLLLKIVSG 228
+ +S V+S G+LL +V G
Sbjct: 217 RYHGRSAAVWSLGILLYDMVCG 238
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 56/101 (55%), Gaps = 12/101 (11%)
Query: 133 IEGIAQGLLYLHQYSRVRIIHRDLKVSNI-LLDKDM---NPKISDFGIAR-ICRGNELQA 187
I+ I G+ YLH +I H DLK NI LLDK++ + K+ DFG+A I G E +
Sbjct: 121 IKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFK- 176
Query: 188 NTGRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
I GT +++PE +++D++S GV+ ++SG
Sbjct: 177 ---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 84/202 (41%), Gaps = 36/202 (17%)
Query: 56 LGEGGFGPVYKGV-LKNGDEIAVKRLSGRSGQGLRELKNK-------------------- 94
LG GGFG VY G+ + + +A+K + EL N
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 91
Query: 95 LRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVT-RVRIIEGIAQGLLY-----LHQYSR 148
+RLL D +LI E P D LFD++T R + E +A+ + +
Sbjct: 92 IRLLDWFERPDSFVLILE-RPEPVQD--LFDFITERGALQEELARSFFWQVLEAVRHCHN 148
Query: 149 VRIIHRDLKVSNILLDKDMNP-KISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQG 207
++HRD+K NIL+D + K+ DFG + + GT Y PE+
Sbjct: 149 CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD----FDGTRVYSPPEWIRYH 204
Query: 208 IFSIKS-DVFSFGVLLLKIVSG 228
+ +S V+S G+LL +V G
Sbjct: 205 RYHGRSAAVWSLGILLYDMVCG 226
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 56/101 (55%), Gaps = 12/101 (11%)
Query: 133 IEGIAQGLLYLHQYSRVRIIHRDLKVSNI-LLDKDM---NPKISDFGIAR-ICRGNELQA 187
I+ I G+ YLH +I H DLK NI LLDK++ + K+ DFG+A I G E +
Sbjct: 121 IKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFK- 176
Query: 188 NTGRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
I GT +++PE +++D++S GV+ ++SG
Sbjct: 177 ---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 84/202 (41%), Gaps = 36/202 (17%)
Query: 56 LGEGGFGPVYKGV-LKNGDEIAVKRLSGRSGQGLRELKNK-------------------- 94
LG GGFG VY G+ + + +A+K + EL N
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 91
Query: 95 LRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVT-RVRIIEGIAQGLLY-----LHQYSR 148
+RLL D +LI E P D LFD++T R + E +A+ + +
Sbjct: 92 IRLLDWFERPDSFVLILE-RPEPVQD--LFDFITERGALQEELARSFFWQVLEAVRHCHN 148
Query: 149 VRIIHRDLKVSNILLDKDMNP-KISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQG 207
++HRD+K NIL+D + K+ DFG + + GT Y PE+
Sbjct: 149 CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD----FDGTRVYSPPEWIRYH 204
Query: 208 IFSIKS-DVFSFGVLLLKIVSG 228
+ +S V+S G+LL +V G
Sbjct: 205 RYHGRSAAVWSLGILLYDMVCG 226
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 84/202 (41%), Gaps = 36/202 (17%)
Query: 56 LGEGGFGPVYKGV-LKNGDEIAVKRLSGRSGQGLRELKNK-------------------- 94
LG GGFG VY G+ + + +A+K + EL N
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 91
Query: 95 LRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVT-RVRIIEGIAQGLLY-----LHQYSR 148
+RLL D +LI E P D LFD++T R + E +A+ + +
Sbjct: 92 IRLLDWFERPDSFVLILE-RPEPVQD--LFDFITERGALQEELARSFFWQVLEAVRHCHN 148
Query: 149 VRIIHRDLKVSNILLDKDMNP-KISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQG 207
++HRD+K NIL+D + K+ DFG + + GT Y PE+
Sbjct: 149 CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD----FDGTRVYSPPEWIRYH 204
Query: 208 IFSIKS-DVFSFGVLLLKIVSG 228
+ +S V+S G+LL +V G
Sbjct: 205 RYHGRSAAVWSLGILLYDMVCG 226
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 84/202 (41%), Gaps = 36/202 (17%)
Query: 56 LGEGGFGPVYKGV-LKNGDEIAVKRLSGRSGQGLRELKNK-------------------- 94
LG GGFG VY G+ + + +A+K + EL N
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 95 LRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVT-RVRIIEGIAQGLLY-----LHQYSR 148
+RLL D +LI E P D LFD++T R + E +A+ + +
Sbjct: 77 IRLLDWFERPDSFVLILE-RPEPVQD--LFDFITERGALQEELARSFFWQVLEAVRHCHN 133
Query: 149 VRIIHRDLKVSNILLDKDMNP-KISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQG 207
++HRD+K NIL+D + K+ DFG + + GT Y PE+
Sbjct: 134 CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD----FDGTRVYSPPEWIRYH 189
Query: 208 IFSIKS-DVFSFGVLLLKIVSG 228
+ +S V+S G+LL +V G
Sbjct: 190 RYHGRSAAVWSLGILLYDMVCG 211
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 56/101 (55%), Gaps = 12/101 (11%)
Query: 133 IEGIAQGLLYLHQYSRVRIIHRDLKVSNI-LLDKDM---NPKISDFGIAR-ICRGNELQA 187
I+ I G+ YLH +I H DLK NI LLDK++ + K+ DFG+A I G E +
Sbjct: 121 IKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFK- 176
Query: 188 NTGRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
I GT +++PE +++D++S GV+ ++SG
Sbjct: 177 ---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 56/101 (55%), Gaps = 12/101 (11%)
Query: 133 IEGIAQGLLYLHQYSRVRIIHRDLKVSNI-LLDKDM---NPKISDFGIAR-ICRGNELQA 187
I+ I G+ YLH +I H DLK NI LLDK++ + K+ DFG+A I G E +
Sbjct: 121 IKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFK- 176
Query: 188 NTGRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
I GT +++PE +++D++S GV+ ++SG
Sbjct: 177 ---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 84/202 (41%), Gaps = 36/202 (17%)
Query: 56 LGEGGFGPVYKGV-LKNGDEIAVKRLSGRSGQGLRELKNK-------------------- 94
LG GGFG VY G+ + + +A+K + EL N
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 95 LRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVT-RVRIIEGIAQGLLY-----LHQYSR 148
+RLL D +LI E P D LFD++T R + E +A+ + +
Sbjct: 77 IRLLDWFERPDSFVLILE-RPEPVQD--LFDFITERGALQEELARSFFWQVLEAVRHCHN 133
Query: 149 VRIIHRDLKVSNILLDKDMNP-KISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQG 207
++HRD+K NIL+D + K+ DFG + + GT Y PE+
Sbjct: 134 CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD----FDGTRVYSPPEWIRYH 189
Query: 208 IFSIKS-DVFSFGVLLLKIVSG 228
+ +S V+S G+LL +V G
Sbjct: 190 RYHGRSAAVWSLGILLYDMVCG 211
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 56/101 (55%), Gaps = 12/101 (11%)
Query: 133 IEGIAQGLLYLHQYSRVRIIHRDLKVSNI-LLDKDM---NPKISDFGIAR-ICRGNELQA 187
I+ I G+ YLH +I H DLK NI LLDK++ + K+ DFG+A I G E +
Sbjct: 121 IKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFK- 176
Query: 188 NTGRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
I GT +++PE +++D++S GV+ ++SG
Sbjct: 177 ---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 56/101 (55%), Gaps = 12/101 (11%)
Query: 133 IEGIAQGLLYLHQYSRVRIIHRDLKVSNI-LLDKDM---NPKISDFGIAR-ICRGNELQA 187
I+ I G+ YLH +I H DLK NI LLDK++ + K+ DFG+A I G E +
Sbjct: 121 IKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFK- 176
Query: 188 NTGRIVGTYRYMSPEYAIQGIFSIKSDVFSFGVLLLKIVSG 228
I GT +++PE +++D++S GV+ ++SG
Sbjct: 177 ---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 85/203 (41%), Gaps = 38/203 (18%)
Query: 56 LGEGGFGPVYKGV-LKNGDEIAVKRLSGRSGQGLRELKNK-------------------- 94
LG GGFG VY G+ + + +A+K + EL N
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 75
Query: 95 LRLLGCCIDKDEKILIYEYM-PNKSLDFFLFDWVT-RVRIIEGIAQGLLY-----LHQYS 147
+RLL D +LI E M P + LFD++T R + E +A+ + +
Sbjct: 76 IRLLDWFERPDSFVLILERMEPVQD----LFDFITERGALQEELARSFFWQVLEAVRHCH 131
Query: 148 RVRIIHRDLKVSNILLDKDMNP-KISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQ 206
++HRD+K NIL+D + K+ DFG + + GT Y PE+
Sbjct: 132 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD----FDGTRVYSPPEWIRY 187
Query: 207 GIFSIKS-DVFSFGVLLLKIVSG 228
+ +S V+S G+LL +V G
Sbjct: 188 HRYHGRSAAVWSLGILLYDMVCG 210
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 84/202 (41%), Gaps = 36/202 (17%)
Query: 56 LGEGGFGPVYKGV-LKNGDEIAVKRLSGRSGQGLRELKNK-------------------- 94
LG GGFG VY G+ + + +A+K + EL N
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 95 LRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVT-RVRIIEGIAQGLLY-----LHQYSR 148
+RLL D +LI E P D LFD++T R + E +A+ + +
Sbjct: 72 IRLLDWFERPDSFVLILE-RPEPVQD--LFDFITERGALQEELARSFFWQVLEAVRHCHN 128
Query: 149 VRIIHRDLKVSNILLDKDMNP-KISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQG 207
++HRD+K NIL+D + K+ DFG + + GT Y PE+
Sbjct: 129 CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD----FDGTRVYSPPEWIRYH 184
Query: 208 IFSIKS-DVFSFGVLLLKIVSG 228
+ +S V+S G+LL +V G
Sbjct: 185 RYHGRSAAVWSLGILLYDMVCG 206
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 84/202 (41%), Gaps = 36/202 (17%)
Query: 56 LGEGGFGPVYKGV-LKNGDEIAVKRLSGRSGQGLRELKNK-------------------- 94
LG GGFG VY G+ + + +A+K + EL N
Sbjct: 15 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 74
Query: 95 LRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVT-RVRIIEGIAQGLLY-----LHQYSR 148
+RLL D +LI E P D LFD++T R + E +A+ + +
Sbjct: 75 IRLLDWFERPDSFVLILE-RPEPVQD--LFDFITERGALQEELARSFFWQVLEAVRHCHN 131
Query: 149 VRIIHRDLKVSNILLDKDMNP-KISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQG 207
++HRD+K NIL+D + K+ DFG + + GT Y PE+
Sbjct: 132 CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD----FDGTRVYSPPEWIRYH 187
Query: 208 IFSIKS-DVFSFGVLLLKIVSG 228
+ +S V+S G+LL +V G
Sbjct: 188 RYHGRSAAVWSLGILLYDMVCG 209
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 84/202 (41%), Gaps = 36/202 (17%)
Query: 56 LGEGGFGPVYKGV-LKNGDEIAVKRLSGRSGQGLRELKNK-------------------- 94
LG GGFG VY G+ + + +A+K + EL N
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 95 LRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVT-RVRIIEGIAQGLLY-----LHQYSR 148
+RLL D +LI E P D LFD++T R + E +A+ + +
Sbjct: 72 IRLLDWFERPDSFVLILE-RPEPVQD--LFDFITERGALQEELARSFFWQVLEAVRHCHN 128
Query: 149 VRIIHRDLKVSNILLDKDMNP-KISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQG 207
++HRD+K NIL+D + K+ DFG + + GT Y PE+
Sbjct: 129 CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD----FDGTRVYSPPEWIRYH 184
Query: 208 IFSIKS-DVFSFGVLLLKIVSG 228
+ +S V+S G+LL +V G
Sbjct: 185 RYHGRSAAVWSLGILLYDMVCG 206
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 84/202 (41%), Gaps = 36/202 (17%)
Query: 56 LGEGGFGPVYKGV-LKNGDEIAVKRLSGRSGQGLRELKNK-------------------- 94
LG GGFG VY G+ + + +A+K + EL N
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 75
Query: 95 LRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVT-RVRIIEGIAQGLLY-----LHQYSR 148
+RLL D +LI E P D LFD++T R + E +A+ + +
Sbjct: 76 IRLLDWFERPDSFVLILE-RPEPVQD--LFDFITERGALQEELARSFFWQVLEAVRHCHN 132
Query: 149 VRIIHRDLKVSNILLDKDMNP-KISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQG 207
++HRD+K NIL+D + K+ DFG + + GT Y PE+
Sbjct: 133 CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD----FDGTRVYSPPEWIRYH 188
Query: 208 IFSIKS-DVFSFGVLLLKIVSG 228
+ +S V+S G+LL +V G
Sbjct: 189 RYHGRSAAVWSLGILLYDMVCG 210
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 84/202 (41%), Gaps = 36/202 (17%)
Query: 56 LGEGGFGPVYKGV-LKNGDEIAVKRLSGRSGQGLRELKNK-------------------- 94
LG GGFG VY G+ + + +A+K + EL N
Sbjct: 51 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 110
Query: 95 LRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVT-RVRIIEGIAQGLLY-----LHQYSR 148
+RLL D +LI E P D LFD++T R + E +A+ + +
Sbjct: 111 IRLLDWFERPDSFVLILE-RPEPVQD--LFDFITERGALQEELARSFFWQVLEAVRHCHN 167
Query: 149 VRIIHRDLKVSNILLDKDMNP-KISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQG 207
++HRD+K NIL+D + K+ DFG + + GT Y PE+
Sbjct: 168 CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD----FDGTRVYSPPEWIRYH 223
Query: 208 IFSIKS-DVFSFGVLLLKIVSG 228
+ +S V+S G+LL +V G
Sbjct: 224 RYHGRSAAVWSLGILLYDMVCG 245
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 84/202 (41%), Gaps = 36/202 (17%)
Query: 56 LGEGGFGPVYKGV-LKNGDEIAVKRLSGRSGQGLRELKNK-------------------- 94
LG GGFG VY G+ + + +A+K + EL N
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 95 LRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVT-RVRIIEGIAQGLLY-----LHQYSR 148
+RLL D +LI E P D LFD++T R + E +A+ + +
Sbjct: 72 IRLLDWFERPDSFVLILE-RPEPVQD--LFDFITERGALQEELARSFFWQVLEAVRHCHN 128
Query: 149 VRIIHRDLKVSNILLDKDMNP-KISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQG 207
++HRD+K NIL+D + K+ DFG + + GT Y PE+
Sbjct: 129 XGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD----FDGTRVYSPPEWIRYH 184
Query: 208 IFSIKS-DVFSFGVLLLKIVSG 228
+ +S V+S G+LL +V G
Sbjct: 185 RYHGRSAAVWSLGILLYDMVCG 206
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 84/202 (41%), Gaps = 36/202 (17%)
Query: 56 LGEGGFGPVYKGV-LKNGDEIAVKRLSGRSGQGLRELKNK-------------------- 94
LG GGFG VY G+ + + +A+K + EL N
Sbjct: 64 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 123
Query: 95 LRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVT-RVRIIEGIAQGLLY-----LHQYSR 148
+RLL D +LI E P D LFD++T R + E +A+ + +
Sbjct: 124 IRLLDWFERPDSFVLILE-RPEPVQD--LFDFITERGALQEELARSFFWQVLEAVRHCHN 180
Query: 149 VRIIHRDLKVSNILLDKDMNP-KISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQG 207
++HRD+K NIL+D + K+ DFG + + GT Y PE+
Sbjct: 181 CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD----FDGTRVYSPPEWIRYH 236
Query: 208 IFSIKS-DVFSFGVLLLKIVSG 228
+ +S V+S G+LL +V G
Sbjct: 237 RYHGRSAAVWSLGILLYDMVCG 258
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 84/202 (41%), Gaps = 36/202 (17%)
Query: 56 LGEGGFGPVYKGV-LKNGDEIAVKRLSGRSGQGLRELKNK-------------------- 94
LG GGFG VY G+ + + +A+K + EL N
Sbjct: 39 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 98
Query: 95 LRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVT-RVRIIEGIAQGLLY-----LHQYSR 148
+RLL D +LI E P D LFD++T R + E +A+ + +
Sbjct: 99 IRLLDWFERPDSFVLILE-RPEPVQD--LFDFITERGALQEELARSFFWQVLEAVRHCHN 155
Query: 149 VRIIHRDLKVSNILLDKDMNP-KISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQG 207
++HRD+K NIL+D + K+ DFG + + GT Y PE+
Sbjct: 156 CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD----FDGTRVYSPPEWIRYH 211
Query: 208 IFSIKS-DVFSFGVLLLKIVSG 228
+ +S V+S G+LL +V G
Sbjct: 212 RYHGRSAAVWSLGILLYDMVCG 233
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 153 HRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAIQGIFSIK 212
HRD+K NIL+ D + DFGIA +L G VGT Y +PE + + +
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKL-TQLGNTVGTLYYXAPERFSESHATYR 215
Query: 213 SDVFSFGVLLLKIVSG 228
+D+++ +L + ++G
Sbjct: 216 ADIYALTCVLYECLTG 231
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 82/205 (40%), Gaps = 34/205 (16%)
Query: 56 LGEGGFGPVYKGVLKNGDEIAVKRLSGRSGQG---------------LRELK-------- 92
+ G +G V GV G +A+KR+ G LRE++
Sbjct: 30 ISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHP 89
Query: 93 NKLRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTRVRIIEG-------IAQGLLYLHQ 145
N L L + +E + Y+ + + L + RI+ + LL LH
Sbjct: 90 NILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHV 149
Query: 146 YSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAI 205
++HRDL NILL + + I DF +A R + AN V Y +PE +
Sbjct: 150 LHEAGVVHRDLHPGNILLADNNDITICDFNLA---REDTADANKTHYVTHRWYRAPELVM 206
Query: 206 Q-GIFSIKSDVFSFGVLLLKIVSGK 229
Q F+ D++S G ++ ++ + K
Sbjct: 207 QFKGFTKLVDMWSAGCVMAEMFNRK 231
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 82/205 (40%), Gaps = 34/205 (16%)
Query: 56 LGEGGFGPVYKGVLKNGDEIAVKRLSGRSGQG---------------LRELK-------- 92
+ G +G V GV G +A+KR+ G LRE++
Sbjct: 30 ISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHP 89
Query: 93 NKLRLLGCCIDKDEKILIYEYMPNKSLDFFLFDWVTRVRIIEG-------IAQGLLYLHQ 145
N L L + +E + Y+ + + L + RI+ + LL LH
Sbjct: 90 NILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHV 149
Query: 146 YSRVRIIHRDLKVSNILLDKDMNPKISDFGIARICRGNELQANTGRIVGTYRYMSPEYAI 205
++HRDL NILL + + I DF +A R + AN V Y +PE +
Sbjct: 150 LHEAGVVHRDLHPGNILLADNNDITICDFNLA---REDTADANKTHYVTHRWYRAPELVM 206
Query: 206 Q-GIFSIKSDVFSFGVLLLKIVSGK 229
Q F+ D++S G ++ ++ + K
Sbjct: 207 QFKGFTKLVDMWSAGCVMAEMFNRK 231
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 63/139 (45%), Gaps = 19/139 (13%)
Query: 132 IIEGIAQGLLYLHQYSRVRIIHRDLKVSNILL-DKDMNP--KISDFGIARICRGNELQAN 188
I++ I + + YLH + I HRD+K N+L K N K++DFG A+ E ++
Sbjct: 166 IMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-----ETTSH 217
Query: 189 TGRIVGTYR--YMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGKKTTGFYRTYSFTLLGYI 246
Y Y++PE + D++S GV++ ++ G FY + + +
Sbjct: 218 NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG--YPPFYSNHGLAISPGM 275
Query: 247 SENI----YEFPSVDTHNV 261
I YEFP+ + V
Sbjct: 276 KTRIRMGQYEFPNPEWSEV 294
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 63/139 (45%), Gaps = 19/139 (13%)
Query: 132 IIEGIAQGLLYLHQYSRVRIIHRDLKVSNILL-DKDMNP--KISDFGIARICRGNELQAN 188
I++ I + + YLH + I HRD+K N+L K N K++DFG A+ E ++
Sbjct: 126 IMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-----ETTSH 177
Query: 189 TGRIVGTYR--YMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGKKTTGFYRTYSFTLLGYI 246
Y Y++PE + D++S GV++ ++ G FY + + +
Sbjct: 178 NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG--YPPFYSNHGLAISPGM 235
Query: 247 SENI----YEFPSVDTHNV 261
I YEFP+ + V
Sbjct: 236 KTRIRMGQYEFPNPEWSEV 254
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 63/139 (45%), Gaps = 19/139 (13%)
Query: 132 IIEGIAQGLLYLHQYSRVRIIHRDLKVSNILL-DKDMNP--KISDFGIARICRGNELQAN 188
I++ I + + YLH + I HRD+K N+L K N K++DFG A+ E ++
Sbjct: 121 IMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-----ETTSH 172
Query: 189 TGRIVGTYR--YMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGKKTTGFYRTYSFTLLGYI 246
Y Y++PE + D++S GV++ ++ G FY + + +
Sbjct: 173 NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG--YPPFYSNHGLAISPGM 230
Query: 247 SENI----YEFPSVDTHNV 261
I YEFP+ + V
Sbjct: 231 KTRIRMGQYEFPNPEWSEV 249
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 63/139 (45%), Gaps = 19/139 (13%)
Query: 132 IIEGIAQGLLYLHQYSRVRIIHRDLKVSNILL-DKDMNP--KISDFGIARICRGNELQAN 188
I++ I + + YLH + I HRD+K N+L K N K++DFG A+ E ++
Sbjct: 120 IMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-----ETTSH 171
Query: 189 TGRIVGTYR--YMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGKKTTGFYRTYSFTLLGYI 246
Y Y++PE + D++S GV++ ++ G FY + + +
Sbjct: 172 NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG--YPPFYSNHGLAISPGM 229
Query: 247 SENI----YEFPSVDTHNV 261
I YEFP+ + V
Sbjct: 230 KTRIRMGQYEFPNPEWSEV 248
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 100/222 (45%), Gaps = 58/222 (26%)
Query: 56 LGEGGFGPVYKGVLKNGDE-IAVKRLSGRSGQGLRELKNKLRLLGCC--IDKDEKILIYE 112
+G G +G VY KN ++ +A+K+++ R + L + K LR + + D I +Y+
Sbjct: 34 IGRGSYGYVYLAYDKNTEKNVAIKKVN-RMFEDLIDCKRILREITILNRLKSDYIIRLYD 92
Query: 113 YM-PNKSLDFFLFD----------------WVTRVRIIEGIAQGLLY--------LHQYS 147
+ P+ D FD + T + + E + +LY +H+
Sbjct: 93 LIIPD---DLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESG 149
Query: 148 RVRIIHRDLKVSNILLDKDMNPKISDFGIARICRG-------NELQAN------------ 188
IIHRDLK +N LL++D + K+ DFG+AR N+L+ N
Sbjct: 150 ---IIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKK 206
Query: 189 --TGRIVGTYRYMSPEYA-IQGIFSIKSDVFSFGVLLLKIVS 227
T +V + Y +PE +Q ++ D++S G + ++++
Sbjct: 207 QLTSHVVTRW-YRAPELILLQENYTKSIDIWSTGCIFAELLN 247
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 63/139 (45%), Gaps = 19/139 (13%)
Query: 132 IIEGIAQGLLYLHQYSRVRIIHRDLKVSNILL-DKDMNP--KISDFGIARICRGNELQAN 188
I++ I + + YLH + I HRD+K N+L K N K++DFG A+ E ++
Sbjct: 127 IMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-----ETTSH 178
Query: 189 TGRIVGTYR--YMSPEYAIQGIFSIKSDVFSFGVLLLKIVSGKKTTGFYRTYSFTLLGYI 246
Y Y++PE + D++S GV++ ++ G FY + + +
Sbjct: 179 NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG--YPPFYSNHGLAISPGM 236
Query: 247 SENI----YEFPSVDTHNV 261
I YEFP+ + V
Sbjct: 237 KTRIRMGQYEFPNPEWSEV 255
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.138 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,959,457
Number of Sequences: 62578
Number of extensions: 425930
Number of successful extensions: 3021
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 841
Number of HSP's successfully gapped in prelim test: 249
Number of HSP's that attempted gapping in prelim test: 992
Number of HSP's gapped (non-prelim): 1210
length of query: 354
length of database: 14,973,337
effective HSP length: 100
effective length of query: 254
effective length of database: 8,715,537
effective search space: 2213746398
effective search space used: 2213746398
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)