Query 048434
Match_columns 110
No_of_seqs 101 out of 1029
Neff 5.0
Searched_HMMs 29240
Date Mon Mar 25 16:29:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048434.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/048434hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3pu7_A Superoxide dismutase [C 99.8 1.7E-19 5.8E-24 132.4 8.5 63 29-92 2-64 (154)
2 3f7l_A Copper,zinc superoxide 99.8 4.2E-19 1.4E-23 129.9 8.7 61 30-92 2-62 (152)
3 4a7u_A Superoxide dismutase [C 99.8 4.3E-19 1.5E-23 129.9 8.6 62 30-92 2-64 (153)
4 2q2l_A Superoxide dismutase; S 99.8 3.9E-19 1.3E-23 130.1 8.0 63 29-92 1-63 (152)
5 1xso_A Copper,zinc superoxide 99.8 1E-18 3.5E-23 127.5 8.3 62 30-92 1-62 (150)
6 1ej8_A Lys7; beta barrel, copp 99.8 1.3E-18 4.6E-23 126.2 7.2 61 31-92 2-73 (140)
7 1to4_A Superoxide dismutase; b 99.8 3E-18 1E-22 125.9 8.9 63 29-92 3-66 (156)
8 3l9y_A Cu-znsod1, superoxide d 99.8 1.7E-18 5.8E-23 126.8 7.6 61 29-92 2-63 (154)
9 2wyt_A Superoxide dismutase [C 99.8 2.6E-18 8.8E-23 125.9 8.4 62 30-92 2-64 (153)
10 3kbe_A Superoxide dismutase [C 99.8 2E-18 6.8E-23 127.0 7.9 62 29-92 1-63 (157)
11 1f1g_A Cuznsod, copper-zinc su 99.7 3E-18 1E-22 125.5 8.6 63 29-92 1-65 (154)
12 1do5_A Human copper chaperone 99.7 2.8E-18 9.6E-23 125.9 8.4 63 29-92 3-65 (154)
13 3ce1_A Superoxide dismutase [C 99.7 9.9E-18 3.4E-22 124.6 8.4 64 28-92 3-68 (168)
14 2e47_A EA4, TIME interVal meas 99.7 1.7E-17 5.7E-22 122.0 7.8 62 28-92 6-68 (156)
15 1qup_A Superoxide dismutase 1 99.7 2.4E-17 8.3E-22 125.7 8.0 63 29-92 76-149 (222)
16 1jk9_B CCS, copper chaperone f 99.7 8E-17 2.7E-21 125.1 6.9 62 30-92 78-150 (249)
17 1z9n_A Superoxide dismutase [C 99.7 1.6E-16 5.6E-21 118.9 7.7 54 29-83 24-80 (177)
18 1oal_A Superoxide dismutase; o 99.6 5.3E-16 1.8E-20 113.4 7.7 45 39-84 12-56 (151)
19 2aqp_A Superoxide dismutase [C 99.6 2.8E-16 9.6E-21 116.2 6.0 53 30-83 12-67 (164)
20 2aqm_A Superoxide dismutase [C 99.6 3E-16 1E-20 115.0 5.4 47 38-85 14-60 (154)
21 1eqw_A Cu,Zn superoxide dismut 99.6 4.7E-16 1.6E-20 114.1 6.3 44 39-83 15-58 (156)
22 1eso_A SOD, Cu, Zn superoxide 99.6 5.8E-16 2E-20 113.4 6.6 46 38-84 14-59 (154)
23 1pzs_A Superoxide dismutase [C 99.6 1.2E-15 4E-20 116.8 8.5 55 28-83 36-94 (208)
24 1xtm_B Hypothetical superoxide 99.6 8.9E-16 3E-20 114.6 7.5 62 28-92 18-84 (175)
25 2jlp_A Extracellular superoxid 99.6 3E-15 1E-19 115.8 8.3 64 28-92 39-114 (222)
26 3biy_A Histone acetyltransfera 33.1 47 0.0016 27.1 4.3 27 45-81 73-99 (380)
27 3od9_A Putative exported prote 29.5 1.5E+02 0.0051 20.9 6.4 31 38-68 85-115 (135)
28 2mcm_A Macromomycin; apoprotei 27.6 65 0.0022 22.1 3.6 23 52-76 13-35 (112)
29 1noa_A Neocarzinostatin; antib 24.2 63 0.0021 22.2 3.0 23 52-76 14-36 (113)
30 2dle_A Receptor-type tyrosine- 22.8 60 0.002 20.5 2.6 20 59-78 60-80 (104)
31 2edd_A Netrin receptor DCC; tu 21.2 1.6E+02 0.0056 18.5 4.6 26 59-84 79-105 (123)
No 1
>3pu7_A Superoxide dismutase [CU-ZN], chloroplastic; oxidoreductase, antioxidant, metal-binding, DIS bond, transit peptide; 1.80A {Solanum lycopersicum} PDB: 3km1_A 3km2_A 3mkg_A 3hog_A 3s0p_A 1srd_A
Probab=99.79 E-value=1.7e-19 Score=132.36 Aligned_cols=63 Identities=35% Similarity=0.586 Sum_probs=56.2
Q ss_pred cceEEEEEcCCCCeEEEEEEEEeCCceEEEEEEecCCCCceeEEEEcCCCCCCCCCccchhhhh
Q 048434 29 HSKAIAVLDGSEGFKGTVSFYQEDGHHTVITVNLANLKAGSHGFHVHESGFIRATTVGNILTHL 92 (110)
Q Consensus 29 ~~kAvavl~g~g~v~G~V~f~q~~~G~v~I~~~l~GLpPG~HGfHIHe~GDcs~g~~g~~~~~~ 92 (110)
+.+|+|++++++++.|+|+|+|.+++.++|+++++|||||+|||||||+|||+++|.+. ..||
T Consensus 2 ~~~Avavl~g~~~V~G~v~f~q~~~g~v~v~~~i~GL~pG~hgfHIHe~Gd~s~gc~Sa-GgHf 64 (154)
T 3pu7_A 2 TKKAVAVLKGNSNVEGVVTLSQDDDGPTTVNVRITGLAPGLHGFHLHEYGDTTNGCMST-GAHF 64 (154)
T ss_dssp EEEEEEEEBCSSSCEEEEEEEEETTSCEEEEEEEESCCSEEEEEEEESCCCCTTGGGGG-CSBC
T ss_pred CceEEEEECCCCCCEEEEEEEEeCCCcEEEEEEEECCCCCcccEEEeecCCCCCCcccc-cccc
Confidence 47899999998899999999999877799999999999999999999999999986443 5555
No 2
>3f7l_A Copper,zinc superoxide dismutase; oxidoreductase (superoxide acceptor), greek KEY beta-barrel, amyloid filaments, ALS, FALS; 0.99A {Alvinella pompejana} SCOP: b.1.8.1 PDB: 3f7k_A
Probab=99.78 E-value=4.2e-19 Score=129.90 Aligned_cols=61 Identities=31% Similarity=0.484 Sum_probs=54.2
Q ss_pred ceEEEEEcCCCCeEEEEEEEEeCCceEEEEEEecCCCCceeEEEEcCCCCCCCCCccchhhhh
Q 048434 30 SKAIAVLDGSEGFKGTVSFYQEDGHHTVITVNLANLKAGSHGFHVHESGFIRATTVGNILTHL 92 (110)
Q Consensus 30 ~kAvavl~g~g~v~G~V~f~q~~~G~v~I~~~l~GLpPG~HGfHIHe~GDcs~g~~g~~~~~~ 92 (110)
.+|+|++++++++.|+|+|+|.++ .++|+++++|||||+|||||||+|||+++|.+. ..||
T Consensus 2 ~~Avavl~g~~~v~G~v~f~q~~~-~v~v~~~l~GL~pG~hgfHIHe~Gd~s~gc~Sa-GgHf 62 (152)
T 3f7l_A 2 IHAVCVLKGDSPVTGTIHLKEEGD-MVTVTGEITGLTPGKHGFHVHEFGDNTNGCTSA-GGHF 62 (152)
T ss_dssp CEEEEEEBCSSSCEEEEEEEEETT-EEEEEEEEESCCSEEEEEEEESCCCCTTTTGGG-CSBC
T ss_pred eEEEEEEcCCCCcEEEEEEEEcCC-cEEEEEEEECCCCCcccEEEeecCcCCCCcccc-cccc
Confidence 689999999889999999999955 499999999999999999999999999986443 5555
No 3
>4a7u_A Superoxide dismutase [CU-ZN]; oxidoreductase, amyotrophic lateral sclerosis, antioxidant, mutation, metal-binding, Zn superoxide dismutase; HET: ALE; 0.98A {Homo sapiens} PDB: 3ecv_A 1uxl_A* 4a7g_F* 4a7q_A* 4a7t_A* 4a7s_A* 4a7v_A* 4b3e_A 4a7g_A* 1hl4_A 1spd_A 2c9v_A* 1hl5_A 1pu0_A 2c9u_A 2c9s_A* 2v0a_A* 3ecu_A 3kh3_A 3kh4_A ...
Probab=99.78 E-value=4.3e-19 Score=129.90 Aligned_cols=62 Identities=32% Similarity=0.485 Sum_probs=55.0
Q ss_pred ceEEEEEcCCCCeEEEEEEEEeCC-ceEEEEEEecCCCCceeEEEEcCCCCCCCCCccchhhhh
Q 048434 30 SKAIAVLDGSEGFKGTVSFYQEDG-HHTVITVNLANLKAGSHGFHVHESGFIRATTVGNILTHL 92 (110)
Q Consensus 30 ~kAvavl~g~g~v~G~V~f~q~~~-G~v~I~~~l~GLpPG~HGfHIHe~GDcs~g~~g~~~~~~ 92 (110)
.+|+|++++++++.|+|+|+|.++ +.++|+++++|||||+|||||||+|||+++|.+. ..||
T Consensus 2 ~~Avavl~g~~~v~G~v~f~q~~~~~~v~v~~~i~GL~pG~hg~HIHe~Gd~s~gc~Sa-GgHf 64 (153)
T 4a7u_A 2 TKAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSA-GPHF 64 (153)
T ss_dssp EEEEEEEBCSSSCEEEEEEEESSTTCCEEEEEEEESCCSEEEEEEEESCCCCTTSGGGG-CSBC
T ss_pred cEEEEEEcCCCccEEEEEEEEeCCCCcEEEEEEEECCCCCcccEEEeecCccccccccc-cCee
Confidence 589999999889999999999985 4699999999999999999999999999986443 5555
No 4
>2q2l_A Superoxide dismutase; SOD, SAD, antioxidant, oxidoreductase, metal-binding; 2.37A {Potentilla atrosanguinea}
Probab=99.78 E-value=3.9e-19 Score=130.07 Aligned_cols=63 Identities=41% Similarity=0.593 Sum_probs=55.7
Q ss_pred cceEEEEEcCCCCeEEEEEEEEeCCceEEEEEEecCCCCceeEEEEcCCCCCCCCCccchhhhh
Q 048434 29 HSKAIAVLDGSEGFKGTVSFYQEDGHHTVITVNLANLKAGSHGFHVHESGFIRATTVGNILTHL 92 (110)
Q Consensus 29 ~~kAvavl~g~g~v~G~V~f~q~~~G~v~I~~~l~GLpPG~HGfHIHe~GDcs~g~~g~~~~~~ 92 (110)
+.+|+|+++++++++|+|+|+|.+++.++|+++++|||||.|||||||+|||+++|.+. ..||
T Consensus 1 ~~~Ava~l~g~~~v~G~v~f~q~~~g~v~v~~~i~GL~pG~hg~HIHe~Gd~~~gc~Sa-G~Hf 63 (152)
T 2q2l_A 1 MAKGVAVLSSSEGVAGTILFTQEGDGPTTVTGNISGLKPGLHGFHVHALGDTTNGCMST-GPHF 63 (152)
T ss_dssp CEEEEEECBCSSSCEEEEEEEESTTSCEEEEEEEESCCSEEEEEEEESCCCCTTGGGGG-CSBC
T ss_pred CceEEEEEeCCCccEEEEEEEEcCCCcEEEEEEECCCCCcceeEEEeecCccCCCcccc-cCcc
Confidence 36899999998899999999998777799999999999999999999999999976443 5555
No 5
>1xso_A Copper,zinc superoxide dismutase; oxidoreductase (superoxide acceptor); 1.49A {Xenopus laevis} SCOP: b.1.8.1
Probab=99.77 E-value=1e-18 Score=127.49 Aligned_cols=62 Identities=34% Similarity=0.495 Sum_probs=54.4
Q ss_pred ceEEEEEcCCCCeEEEEEEEEeCCceEEEEEEecCCCCceeEEEEcCCCCCCCCCccchhhhh
Q 048434 30 SKAIAVLDGSEGFKGTVSFYQEDGHHTVITVNLANLKAGSHGFHVHESGFIRATTVGNILTHL 92 (110)
Q Consensus 30 ~kAvavl~g~g~v~G~V~f~q~~~G~v~I~~~l~GLpPG~HGfHIHe~GDcs~g~~g~~~~~~ 92 (110)
.+|+|+++++++++|+|+|+|.+++.+.|+++++|||||+|||||||+|||+++|.+. ..||
T Consensus 1 ~~Ava~l~~~~~v~G~v~f~q~~~~~v~v~~~i~GL~pG~hg~HIHe~Gd~s~gc~sa-G~Hf 62 (150)
T 1xso_A 1 VKAVCVLAGSGDVKGVVHFEQQDEGAVSVEGKIEGLTDGLHGFHIHVFGDNTNGCMSA-GSHF 62 (150)
T ss_dssp CEEEEEEBCSSSCEEEEEEEESTTSCEEEEEEEESCCSEEEEEEEESCCCCTTGGGGG-CSBC
T ss_pred CEEEEEEcCCCccEEEEEEEEcCCCcEEEEEEECCCCCCceeEEEecCCCCCCCcccc-cCcc
Confidence 4799999998899999999998766699999999999999999999999999976443 5555
No 6
>1ej8_A Lys7; beta barrel, copper chaperone for SOD, domain 2; 1.55A {Saccharomyces cerevisiae} SCOP: b.1.8.1
Probab=99.75 E-value=1.3e-18 Score=126.20 Aligned_cols=61 Identities=18% Similarity=0.265 Sum_probs=52.1
Q ss_pred eEEEEEcCC----------CCeEEEEEEEEeCCceEEEEEEecCCC-CceeEEEEcCCCCCCCCCccchhhhh
Q 048434 31 KAIAVLDGS----------EGFKGTVSFYQEDGHHTVITVNLANLK-AGSHGFHVHESGFIRATTVGNILTHL 92 (110)
Q Consensus 31 kAvavl~g~----------g~v~G~V~f~q~~~G~v~I~~~l~GLp-PG~HGfHIHe~GDcs~g~~g~~~~~~ 92 (110)
+|+|++++. +++.|+|+|+|..++.+.|+++++||| ||+|||||||+|||+++|.+. ..||
T Consensus 2 aAV~vl~~~~~~~~~~~~~~~v~G~v~f~q~~~~~v~i~~~l~GL~~pG~HGfHIHe~Gd~s~g~~Sa-G~Hf 73 (140)
T 1ej8_A 2 SAVAILETFQKYTIDQKKDTAVRGLARIVQVGENKTLFDITVNGVPEAGNYHASIHEKGDVSKGVEST-GKVW 73 (140)
T ss_dssp EEEEEEECCSCCTTCCCCSCCEEEEEEEEEEETTEEEEEEEEEEESSCEEEEEEEESCCCCTTGGGGS-CSEE
T ss_pred cEEEEEccCCcccccccCCCCcEEEEEEEEeCCCCEEEEEEEECCCCCCeeEEEEcCCCCCCCCcccc-cCcc
Confidence 589999875 579999999997434499999999999 999999999999999987544 5665
No 7
>1to4_A Superoxide dismutase; beta-barrel, oxidoreductase; 1.55A {Schistosoma mansoni} SCOP: b.1.8.1 PDB: 1to5_A 3mnd_A
Probab=99.75 E-value=3e-18 Score=125.87 Aligned_cols=63 Identities=38% Similarity=0.602 Sum_probs=55.2
Q ss_pred cceEEEEEcCCCCeEEEEEEEEeC-CceEEEEEEecCCCCceeEEEEcCCCCCCCCCccchhhhh
Q 048434 29 HSKAIAVLDGSEGFKGTVSFYQED-GHHTVITVNLANLKAGSHGFHVHESGFIRATTVGNILTHL 92 (110)
Q Consensus 29 ~~kAvavl~g~g~v~G~V~f~q~~-~G~v~I~~~l~GLpPG~HGfHIHe~GDcs~g~~g~~~~~~ 92 (110)
+.+|+|+++++++++|+|+|+|.. ++.+.|+++++|||||+|||||||+|||+++|.+. ..||
T Consensus 3 ~~~Ava~l~~~~~v~G~v~f~q~~~~~~v~v~~~l~GL~pG~hg~HIHe~Gd~s~gc~Sa-G~Hf 66 (156)
T 1to4_A 3 NMKAVCVMTGTAGVKGVVKFTQETDNGPVHVHAEFSGLKAGKHGFHVHEFGDTTNGCTSA-GAHF 66 (156)
T ss_dssp CCEEEEEEBCSSSCEEEEEEEESSTTSCEEEEEEEESCCSEEEEEEEESCCCCTTTTGGG-CSBC
T ss_pred ceEEEEEEeCCCccEEEEEEEEeCCCCCEEEEEEECCCCCCcEeEEEecCCCCCCChhhc-cCcC
Confidence 578999999988999999999975 45699999999999999999999999999986443 5555
No 8
>3l9y_A Cu-znsod1, superoxide dismutase [CU-ZN]; greek-KEY-barrel, antioxidant, copper, cytoplasm, metal- binding, oxidoreductase; 1.80A {Bombyx mori} SCOP: b.1.8.1 PDB: 3l9e_A
Probab=99.75 E-value=1.7e-18 Score=126.82 Aligned_cols=61 Identities=38% Similarity=0.546 Sum_probs=53.3
Q ss_pred cceEEEEEcCCCCeEEEEEEEEeCC-ceEEEEEEecCCCCceeEEEEcCCCCCCCCCccchhhhh
Q 048434 29 HSKAIAVLDGSEGFKGTVSFYQEDG-HHTVITVNLANLKAGSHGFHVHESGFIRATTVGNILTHL 92 (110)
Q Consensus 29 ~~kAvavl~g~g~v~G~V~f~q~~~-G~v~I~~~l~GLpPG~HGfHIHe~GDcs~g~~g~~~~~~ 92 (110)
+.+|+|+++|+ +.|+|+|+|.++ +.++|+++++|||||+|||||||+|||+++|.+. ..||
T Consensus 2 ~~~Ava~l~G~--v~G~v~f~q~~~~~~v~v~~~l~GL~pG~hg~HIHe~Gd~s~gc~Sa-GgHf 63 (154)
T 3l9y_A 2 PAKAVCVLRGD--VSGTVFFDQQDEKSPVVVSGEVQGLTKGKHGFHVHEFGDNTNGCTSA-GAHF 63 (154)
T ss_dssp CEEEEEEEEES--SEEEEEEEESSTTSCEEEEEEEESCCSEEEEEEEESCCCCTTGGGGG-CSBC
T ss_pred CeEEEEEEcCC--CEEEEEEEEeCCCCcEEEEEEEECCCCCCccEEEEecCcCCCCcccc-cccc
Confidence 57999999975 999999999973 4599999999999999999999999999986443 5565
No 9
>2wyt_A Superoxide dismutase [CU-ZN]; oxidoreductase, disease mutation, amyotrophic lateral sclero antioxidant; HET: SO4; 1.00A {Homo sapiens} PDB: 2wyz_A* 2wz0_A* 2wz5_A* 1hl4_A 1spd_A 2c9v_A* 1hl5_A 1pu0_A 2c9u_A 2c9s_A* 2v0a_A* 3ecu_A 3kh3_A 3kh4_A 3re0_A 2wko_A 3gzo_A 2wz6_A* 3gzp_A 1uxl_A ...
Probab=99.75 E-value=2.6e-18 Score=125.85 Aligned_cols=62 Identities=31% Similarity=0.474 Sum_probs=54.4
Q ss_pred ceEEEEEcCCCCeEEEEEEEEeCC-ceEEEEEEecCCCCceeEEEEcCCCCCCCCCccchhhhh
Q 048434 30 SKAIAVLDGSEGFKGTVSFYQEDG-HHTVITVNLANLKAGSHGFHVHESGFIRATTVGNILTHL 92 (110)
Q Consensus 30 ~kAvavl~g~g~v~G~V~f~q~~~-G~v~I~~~l~GLpPG~HGfHIHe~GDcs~g~~g~~~~~~ 92 (110)
.+|+|+++++++++|+|+|+|.++ +.+.|+++++|||||+|||||||+|||+++|.+. ..||
T Consensus 2 ~~Ava~l~~~~~v~G~v~f~q~~~g~~v~v~~~i~GL~pG~hg~HIHe~gd~~~~c~Sa-G~Hf 64 (153)
T 2wyt_A 2 TKAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGVTEGLHGFHVHEFGDNTAGCTSA-GPHF 64 (153)
T ss_dssp EEEEEEEBCSSSCEEEEEEEECSTTCCEEEEEEEESCCSEEEEEEEESCCCCTTGGGGG-CSBC
T ss_pred eEEEEEEcCCCceEEEEEEEEcCCCCcEEEEEEECCCCCcceeEEEecCCcCCCCcccc-cCcc
Confidence 679999998889999999999975 4699999999999999999999999999976443 5555
No 10
>3kbe_A Superoxide dismutase [CU-ZN]; Cu-Zn superoxide dismutase, antioxidant, oxidoreductase, NEM disulfide bond, metal-binding; 1.10A {Caenorhabditis elegans} SCOP: b.1.8.1 PDB: 3kbf_A
Probab=99.75 E-value=2e-18 Score=126.99 Aligned_cols=62 Identities=32% Similarity=0.509 Sum_probs=54.1
Q ss_pred cceEEEEEcCCCCeEEEEEEEEeCC-ceEEEEEEecCCCCceeEEEEcCCCCCCCCCccchhhhh
Q 048434 29 HSKAIAVLDGSEGFKGTVSFYQEDG-HHTVITVNLANLKAGSHGFHVHESGFIRATTVGNILTHL 92 (110)
Q Consensus 29 ~~kAvavl~g~g~v~G~V~f~q~~~-G~v~I~~~l~GLpPG~HGfHIHe~GDcs~g~~g~~~~~~ 92 (110)
+.+|+|+++|+ +++|+|+|+|.++ +.++|+++++|||||+|||||||+|||+++|.+. ..||
T Consensus 1 p~~Avavl~g~-~V~G~v~f~q~~~g~~v~v~~~l~GL~pG~hgfHIHe~Gd~s~gc~Sa-GgHf 63 (157)
T 3kbe_A 1 SNRAVAVLRGE-TVTGTIWITQKSENDQAVIEGEIKGLTPGLHGFHVHQYGDSTNGCISA-GPHF 63 (157)
T ss_dssp CCEEEEEEBCS-SCEEEEEEECSSTTSCCEEEEEEESCCSSCEEEEEESCCCCTTTTGGG-CSBC
T ss_pred CeEEEEEEeCC-CEEEEEEEEEeCCCCeEEEEEEEECCCCCcccEEEeecCccCcccccc-cccc
Confidence 47999999986 5999999999974 4599999999999999999999999999987543 5565
No 11
>1f1g_A Cuznsod, copper-zinc superoxide dismutase; nitric oxide, oxidoreductase; 1.35A {Saccharomyces cerevisiae} SCOP: b.1.8.1 PDB: 1f1a_A 1f18_A 1jcv_A 1b4l_A 1sdy_A 1yaz_A 1yso_A 2jcw_A 1f1d_A 1jk9_A 1b4t_A
Probab=99.75 E-value=3e-18 Score=125.51 Aligned_cols=63 Identities=32% Similarity=0.495 Sum_probs=54.3
Q ss_pred cceEEEEEcCCCCeEEEEEEEEeC-CceEEEEEEecCCCC-ceeEEEEcCCCCCCCCCccchhhhh
Q 048434 29 HSKAIAVLDGSEGFKGTVSFYQED-GHHTVITVNLANLKA-GSHGFHVHESGFIRATTVGNILTHL 92 (110)
Q Consensus 29 ~~kAvavl~g~g~v~G~V~f~q~~-~G~v~I~~~l~GLpP-G~HGfHIHe~GDcs~g~~g~~~~~~ 92 (110)
+.+|+|+++++++++|+|+|+|.+ ++.+.|+++++|||| |.|||||||+|||+++|.+. ..||
T Consensus 1 ~~~Ava~l~g~~~v~G~v~f~q~~~~~~v~v~~~i~GL~p~G~hg~HIHe~Gd~s~gc~Sa-G~Hf 65 (154)
T 1f1g_A 1 MVQAVAVLKGDAGVSGVVKFEQASESEPTTVSYEIAGNSPNAERGFHIHEFGDATNGCVSA-GPHF 65 (154)
T ss_dssp -CEEEEEEBCSSSCEEEEEEECSSTTSCEEEEEEEESCCSSCEEEEEEESCCCCTTTTGGG-CSBC
T ss_pred CeEEEEEEcCCCccEEEEEEEEeCCCCCEEEEEEEeeCCCCCeEeEEEecCCCCCCChhhc-cCcc
Confidence 368999999988999999999974 456999999999999 99999999999999986443 5555
No 12
>1do5_A Human copper chaperone for superoxide dismutase domain II; beta-barrel; 2.75A {Homo sapiens} SCOP: b.1.8.1
Probab=99.75 E-value=2.8e-18 Score=125.87 Aligned_cols=63 Identities=29% Similarity=0.456 Sum_probs=54.0
Q ss_pred cceEEEEEcCCCCeEEEEEEEEeCCceEEEEEEecCCCCceeEEEEcCCCCCCCCCccchhhhh
Q 048434 29 HSKAIAVLDGSEGFKGTVSFYQEDGHHTVITVNLANLKAGSHGFHVHESGFIRATTVGNILTHL 92 (110)
Q Consensus 29 ~~kAvavl~g~g~v~G~V~f~q~~~G~v~I~~~l~GLpPG~HGfHIHe~GDcs~g~~g~~~~~~ 92 (110)
..+|+|++++++++.|+|+|+|..++.+.|+++++|||||.|||||||+|||+++|.+. ..||
T Consensus 3 ~~~ava~l~~~~~v~G~v~f~q~~~~~v~v~~~i~GL~pG~hg~HIHe~Gd~s~~c~Sa-G~Hf 65 (154)
T 1do5_A 3 LGAAVAILGGPGTVQGVVRFLQLTPERCLIEGTIDGLEPGLHGLHVHQYGDLTNNCNSC-GNHF 65 (154)
T ss_dssp CEEEEEEEBCSSSCEEEEEEEEEETTEEEEEEEEESCCSEEEEEEEESCCCCTTGGGTT-CSBC
T ss_pred cceEEEEEcCCCCcEEEEEEEEecCCCEEEEEEEECCCCCceeEEEeecCCCCCCcccC-cCcc
Confidence 47899999998889999999995434599999999999999999999999999976433 4554
No 13
>3ce1_A Superoxide dismutase [CU-ZN]; greek-KEY beta barrel, antioxidant, copper, metal-binding, oxidoreductase, zinc; 1.20A {Cryptococcus liquefaciens}
Probab=99.73 E-value=9.9e-18 Score=124.61 Aligned_cols=64 Identities=33% Similarity=0.506 Sum_probs=53.3
Q ss_pred CcceEEEEEcCCCCeEEEEEEEEeC-CceEEEEEEecCCCC-ceeEEEEcCCCCCCCCCccchhhhh
Q 048434 28 PHSKAIAVLDGSEGFKGTVSFYQED-GHHTVITVNLANLKA-GSHGFHVHESGFIRATTVGNILTHL 92 (110)
Q Consensus 28 ~~~kAvavl~g~g~v~G~V~f~q~~-~G~v~I~~~l~GLpP-G~HGfHIHe~GDcs~g~~g~~~~~~ 92 (110)
.+.+|+|+++++++++|+|+|+|.+ ++.+.|+++++|||| |.|||||||+|||+++|.+. ..||
T Consensus 3 ~~~~Ava~l~g~~~v~G~v~f~q~~~~~~v~v~~~i~GL~p~G~hg~HIHe~Gd~s~gc~Sa-GgHf 68 (168)
T 3ce1_A 3 STIKAIAVLKGDSPVQGVITFTQESSGGPVTVSGEIKNMDANAQRGFHVHQFGDNSNGCTSA-GPHF 68 (168)
T ss_dssp --CEEEEEEBCSSSCEEEEEEEEC---CCEEEEEEEESCCTTCEEEEEEESCCCCTTGGGGG-CSBC
T ss_pred CccEEEEEEcCCCccEEEEEEEEeCCCCCEEEEEEEeeCCCCCeeeEEEecCCcCCCChhhc-cCcc
Confidence 3578999999988999999999974 456999999999999 99999999999999976433 4554
No 14
>2e47_A EA4, TIME interVal measuring enzyme TIME; motalloprotein, glycoprotein, metal binding protein; HET: NAG MAN; 2.11A {Bombyx mori} PDB: 2e46_A
Probab=99.71 E-value=1.7e-17 Score=121.96 Aligned_cols=62 Identities=29% Similarity=0.498 Sum_probs=53.6
Q ss_pred CcceEEEEEcCCCCeEEEEEEEEeCC-ceEEEEEEecCCCCceeEEEEcCCCCCCCCCccchhhhh
Q 048434 28 PHSKAIAVLDGSEGFKGTVSFYQEDG-HHTVITVNLANLKAGSHGFHVHESGFIRATTVGNILTHL 92 (110)
Q Consensus 28 ~~~kAvavl~g~g~v~G~V~f~q~~~-G~v~I~~~l~GLpPG~HGfHIHe~GDcs~g~~g~~~~~~ 92 (110)
++.+|+|+++++ +++|+|+| |.++ +.+.|+++++|||||+|||||||+|||+++|.+. ..||
T Consensus 6 ~~~~Ava~l~~~-~v~G~v~f-q~~~g~~v~v~~~i~GL~pG~hg~HIHe~Gd~s~~c~Sa-GgHf 68 (156)
T 2e47_A 6 TPSRAIAVLSTE-TIRGNITF-TQVQDGKVHVQGGITGLPPGEYGFHVHEKGDLSGGCLST-GSHF 68 (156)
T ss_dssp CCCEEEEEEECS-SCEEEEEE-EECGGGCEEEEEEEESSCSEEEEEEEESCCCCTTGGGGG-CSBC
T ss_pred cccEEEEEEeCC-CeEEEEEE-EeCCCCcEEEEEEEEeCCCCcEEEEEeCCCcCCCChhhc-cCcc
Confidence 568999999987 89999999 8875 4699999999999999999999999999976443 5555
No 15
>1qup_A Superoxide dismutase 1 copper chaperone; two domains, beta-alpha-beta-BETA-alpha-beta and beta barrel; 1.80A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1
Probab=99.70 E-value=2.4e-17 Score=125.74 Aligned_cols=63 Identities=19% Similarity=0.275 Sum_probs=53.5
Q ss_pred cceEEEEEcCC----------CCeEEEEEEEEeCCceEEEEEEecCCC-CceeEEEEcCCCCCCCCCccchhhhh
Q 048434 29 HSKAIAVLDGS----------EGFKGTVSFYQEDGHHTVITVNLANLK-AGSHGFHVHESGFIRATTVGNILTHL 92 (110)
Q Consensus 29 ~~kAvavl~g~----------g~v~G~V~f~q~~~G~v~I~~~l~GLp-PG~HGfHIHe~GDcs~g~~g~~~~~~ 92 (110)
..+|+|++++. +++.|+|+|+|..++.+.|+++++||| ||.|||||||+|||+++|.+. .+||
T Consensus 76 ~~~av~~l~~~~~~~~~~~~~~~v~G~v~~~q~~~~~~~v~~~i~GL~~~g~hg~hiHe~Gd~~~g~~sa-G~h~ 149 (222)
T 1qup_A 76 NSSAVAILETFQKYTIDQKKDTAVRGLARIVQVGENKTLFDITVNGVPEAGNYHASIHEKGDVSKGVEST-GKVW 149 (222)
T ss_dssp TCEEEEEEECCSCCSSCCCCSCCEEEEEEEEECSSSCEEEEEEEEEESSCEEEEEEEESCCCCTTGGGGG-CSEE
T ss_pred cceeeEEeccccccccccccCCCceEEEEEEEecCCCEEEEEEEeCCCCCCcEeEEEcCCCCCCCCcccc-cCCc
Confidence 35899999874 579999999997433499999999999 999999999999999986544 5665
No 16
>1jk9_B CCS, copper chaperone for superoxide dismutase; protein-protein complex, heterodimer, metallochaperone, amyotrophic lateral sclerosis; 2.90A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1
Probab=99.67 E-value=8e-17 Score=125.08 Aligned_cols=62 Identities=19% Similarity=0.273 Sum_probs=52.8
Q ss_pred ceEEEEEcCC----------CCeEEEEEEEEeCCceEEEEEEecCCC-CceeEEEEcCCCCCCCCCccchhhhh
Q 048434 30 SKAIAVLDGS----------EGFKGTVSFYQEDGHHTVITVNLANLK-AGSHGFHVHESGFIRATTVGNILTHL 92 (110)
Q Consensus 30 ~kAvavl~g~----------g~v~G~V~f~q~~~G~v~I~~~l~GLp-PG~HGfHIHe~GDcs~g~~g~~~~~~ 92 (110)
.+|+|++++. +++.|+|+|+|..++.+.|+++++||| ||.|||||||+|||++++.+. .+||
T Consensus 78 ~~Av~~l~~~~~~~~~~~~~~~v~G~v~f~q~~~~~~~v~~~~~GL~~~g~hg~hiHe~Gd~~~g~~sa-G~h~ 150 (249)
T 1jk9_B 78 SSAVAILETFQKYTIDQKKDTAVRGLARIVQVGENKTLFDITVNGVPEAGNYHASIHEKGDVSKGVEST-GKVW 150 (249)
T ss_dssp SEEEEEEEESSCCTTSCTTCCSEEEEEEEEEEETTEEEEEEEEEEESSCEEEEEEEESCCCCTTGGGGG-CSEE
T ss_pred ceeEEEeccccccccccccCCCcEEEEEEEEcCCCCEEEEEEEeCCCCCCcEeEEEEeCCCCCCCcccc-cCCc
Confidence 5899999864 579999999997434499999999999 999999999999999986544 5665
No 17
>1z9n_A Superoxide dismutase [CU-ZN]; Cu-Zn SOD, SOD, oxidoreductase; HET: HEM; 1.50A {Haemophilus ducreyi}
Probab=99.66 E-value=1.6e-16 Score=118.95 Aligned_cols=54 Identities=26% Similarity=0.255 Sum_probs=47.3
Q ss_pred cceEEEEEc---CCCCeEEEEEEEEeCCceEEEEEEecCCCCceeEEEEcCCCCCCCC
Q 048434 29 HSKAIAVLD---GSEGFKGTVSFYQEDGHHTVITVNLANLKAGSHGFHVHESGFIRAT 83 (110)
Q Consensus 29 ~~kAvavl~---g~g~v~G~V~f~q~~~G~v~I~~~l~GLpPG~HGfHIHe~GDcs~g 83 (110)
..++.+.+. ++++++|+|+|+|.++| ++|+++++|||||+|||||||+|||+++
T Consensus 24 ~~~~~~~l~~~~g~~~v~G~v~f~q~~~g-v~v~~~l~GL~pG~HGfHIHe~Gdcs~g 80 (177)
T 1z9n_A 24 KIVVPVQQLDPQNGNKDVGTVEITESAYG-LVFTPKLHDLAHGLHGFHIHEKPSCEPK 80 (177)
T ss_dssp CEEEEEEECCTTTCCEEEEEEEEEEETTE-EEEEEEECSCCSEEECEEEESSSCCCCE
T ss_pred cceEEEEEecCCCCCccEEEEEEEEcCCc-EEEEEEEeCCCCCceeEEEecCCccccc
Confidence 455666665 34789999999999887 9999999999999999999999999975
No 18
>1oal_A Superoxide dismutase; oxidoreductase, prokaryotic Cu, protein-subunit interaction recognition, protein electrostatic; 1.5A {Photobacterium leiognathi} SCOP: b.1.8.1 PDB: 1bzo_A 1ibh_A 1ibd_A 1yai_A 1ib5_A 1oaj_A 1ibb_A 1ibf_A
Probab=99.63 E-value=5.3e-16 Score=113.41 Aligned_cols=45 Identities=31% Similarity=0.519 Sum_probs=42.0
Q ss_pred CCCeEEEEEEEEeCCceEEEEEEecCCCCceeEEEEcCCCCCCCCC
Q 048434 39 SEGFKGTVSFYQEDGHHTVITVNLANLKAGSHGFHVHESGFIRATT 84 (110)
Q Consensus 39 ~g~v~G~V~f~q~~~G~v~I~~~l~GLpPG~HGfHIHe~GDcs~g~ 84 (110)
+++++|+|+|+|.+++ ++|+++++|||||+|||||||+|||+++|
T Consensus 12 ~~~v~G~v~f~q~~~g-v~v~~~l~GL~pG~hGfHIHe~Gd~~~g~ 56 (151)
T 1oal_A 12 TGKPVGTIELSQNKYG-VVFIPELADLTPGEHGFHIHQNGSCASSE 56 (151)
T ss_dssp TCCEEEEEEEEEETTE-EEEEEEECSCCSEEECEEEESSSCCCCEE
T ss_pred CCCeEEEEEEEEcCCc-EEEEEEEECCCCCcceEEEccCCcCCCcc
Confidence 5789999999999887 99999999999999999999999999853
No 19
>2aqp_A Superoxide dismutase [CU-ZN]; electrostatic guidance, neisseria MENI oxidoreductase; 1.30A {Neisseria meningitidis} PDB: 2aqn_A 2aqr_A 2aqq_A 2aqt_C 2aqs_A 2aps_A 1z9p_A
Probab=99.63 E-value=2.8e-16 Score=116.21 Aligned_cols=53 Identities=28% Similarity=0.330 Sum_probs=45.4
Q ss_pred ceEEEEEc---CCCCeEEEEEEEEeCCceEEEEEEecCCCCceeEEEEcCCCCCCCC
Q 048434 30 SKAIAVLD---GSEGFKGTVSFYQEDGHHTVITVNLANLKAGSHGFHVHESGFIRAT 83 (110)
Q Consensus 30 ~kAvavl~---g~g~v~G~V~f~q~~~G~v~I~~~l~GLpPG~HGfHIHe~GDcs~g 83 (110)
.++.+.+. ++++++|+|+|+|.+++ ++|+++++|||||+|||||||+|||+++
T Consensus 12 ~~~~~~~~~~~g~~~v~G~v~f~q~~~g-v~v~~~l~GL~pG~HGfHIHe~Gdc~~g 67 (164)
T 2aqp_A 12 IEVKVQQLDPVNGNKDVGTVTITESNYG-LVFTPDLQGLSAGLHGFHIHENPSCEPK 67 (164)
T ss_dssp EEEEEEECCTTTCCEEEEEEEEEEETTE-EEEEEEECSCCSEEECEEEESSSCCCCE
T ss_pred ceEEEEEecCCCCCceEEEEEEEEcCCc-EEEEEEEeCCCCCceeEEEecCCcccCc
Confidence 34445443 44689999999999887 9999999999999999999999999975
No 20
>2aqm_A Superoxide dismutase [CU-ZN]; oxidoreductase; 1.10A {Brucella abortus}
Probab=99.62 E-value=3e-16 Score=115.03 Aligned_cols=47 Identities=34% Similarity=0.461 Sum_probs=43.2
Q ss_pred CCCCeEEEEEEEEeCCceEEEEEEecCCCCceeEEEEcCCCCCCCCCc
Q 048434 38 GSEGFKGTVSFYQEDGHHTVITVNLANLKAGSHGFHVHESGFIRATTV 85 (110)
Q Consensus 38 g~g~v~G~V~f~q~~~G~v~I~~~l~GLpPG~HGfHIHe~GDcs~g~~ 85 (110)
++++++|+|+|+|.+++ ++|+++++|||||+|||||||+|||+++|.
T Consensus 14 ~~~~v~G~v~f~q~~~g-v~v~~~l~GL~pG~hGfHIHe~Gdc~~gc~ 60 (154)
T 2aqm_A 14 GPGKEVGTVVISEAPGG-LHFKVNMEKLTPGYHGFHVHENPSCAPGEK 60 (154)
T ss_dssp EEEEEEEEEEEECCTTS-EEEEEEECSCCSEEECEEEESSSCCCCEEE
T ss_pred CCCceEEEEEEEEcCCC-EEEEEEEECCCCCcceEEEccCCccCCccc
Confidence 45789999999999888 999999999999999999999999998654
No 21
>1eqw_A Cu,Zn superoxide dismutase; greek KEY B-barrel, oxidoreductase; 2.30A {Salmonella typhimurium} SCOP: b.1.8.1 PDB: 2wn0_A* 2wn1_A* 2wwn_A* 2wwo_A*
Probab=99.62 E-value=4.7e-16 Score=114.13 Aligned_cols=44 Identities=25% Similarity=0.335 Sum_probs=41.2
Q ss_pred CCCeEEEEEEEEeCCceEEEEEEecCCCCceeEEEEcCCCCCCCC
Q 048434 39 SEGFKGTVSFYQEDGHHTVITVNLANLKAGSHGFHVHESGFIRAT 83 (110)
Q Consensus 39 ~g~v~G~V~f~q~~~G~v~I~~~l~GLpPG~HGfHIHe~GDcs~g 83 (110)
+++++|+|+|+|.+++ +.|+++++|||||+|||||||+|||+++
T Consensus 15 ~~~v~G~v~f~q~~~g-v~v~~~l~GL~pG~hGfHIHe~Gd~~~g 58 (156)
T 1eqw_A 15 TGENIGEITVSETPYG-LLFTPHLNGLTPGIHGFHVHTNPSCMPG 58 (156)
T ss_dssp EEEEEEEEEEEEETTE-EEEEEEECSCCSEEECEEEESSSCCCCE
T ss_pred CCceEEEEEEEEcCCc-EEEEEEEeCCCCCceeEEECCCCcCCCc
Confidence 3689999999999887 9999999999999999999999999975
No 22
>1eso_A SOD, Cu, Zn superoxide dismutase; oxidoreductase, monomeric superoxide dismutase, copper enzymes, enzyme evolution, X- RAY; 2.00A {Escherichia coli} SCOP: b.1.8.1 PDB: 2k4w_A
Probab=99.62 E-value=5.8e-16 Score=113.43 Aligned_cols=46 Identities=30% Similarity=0.513 Sum_probs=42.2
Q ss_pred CCCCeEEEEEEEEeCCceEEEEEEecCCCCceeEEEEcCCCCCCCCC
Q 048434 38 GSEGFKGTVSFYQEDGHHTVITVNLANLKAGSHGFHVHESGFIRATT 84 (110)
Q Consensus 38 g~g~v~G~V~f~q~~~G~v~I~~~l~GLpPG~HGfHIHe~GDcs~g~ 84 (110)
++++++|+|+|+|.+++ ++|+++++|||||+|||||||+|||+++|
T Consensus 14 g~~~v~G~v~f~q~~~g-v~v~~~l~GL~pG~hGfHIHe~Gd~~~g~ 59 (154)
T 1eso_A 14 GVGQSIGSVTITETDKG-LEFSPDLKALPPGEHGFHIHAKGSCQPAT 59 (154)
T ss_dssp EEEEEEEEEEEEEETTE-EEEEEEECSCCSEEECEEEESSSCCCCBC
T ss_pred CCCccEEEEEEEEcCCC-EEEEEEEECCCCCcccEEEcCCCccCCcc
Confidence 34689999999999887 99999999999999999999999999864
No 23
>1pzs_A Superoxide dismutase [CU-ZN]; Cu-protein, beta core, antioxidant, metal binding, greek KEY barrel, oxidoreductase; 1.63A {Mycobacterium tuberculosis} SCOP: b.1.8.1
Probab=99.62 E-value=1.2e-15 Score=116.81 Aligned_cols=55 Identities=22% Similarity=0.350 Sum_probs=48.6
Q ss_pred CcceEEEEEcC-CCCeEEEEEEEEeCCceEEEEEEecC---CCCceeEEEEcCCCCCCCC
Q 048434 28 PHSKAIAVLDG-SEGFKGTVSFYQEDGHHTVITVNLAN---LKAGSHGFHVHESGFIRAT 83 (110)
Q Consensus 28 ~~~kAvavl~g-~g~v~G~V~f~q~~~G~v~I~~~l~G---LpPG~HGfHIHe~GDcs~g 83 (110)
...+|+|+|++ +++++|+|+|+|.+++ ++|+++++| |+||+|||||||+|||+++
T Consensus 36 ~~~~ava~L~~~~g~v~G~V~f~q~~~g-v~v~~~l~G~~~L~pG~HGfHIHe~Gdcs~~ 94 (208)
T 1pzs_A 36 GAQSLTSTLTAPDGTKVATAKFEFANGY-ATVTIATTGVGKLTPGFHGLHIHQVGKCEPN 94 (208)
T ss_dssp --CEEEEEEECTTSCEEEEEEEEEETTE-EEEEEEESSSSSSCSEEECEEEESSCCCCSS
T ss_pred CCceEEEEEeCCCCceEEEEEEEEcCCc-EEEEEEEeCCccCCCCceeEEEecCCcccCc
Confidence 46889999984 5789999999999776 999999999 9999999999999999873
No 24
>1xtm_B Hypothetical superoxide dismutase-like protein YO; SOD, Cu-Zn SOD, SOD-like, superoxide dismutase mutants, STRU genomics, unknown function; 1.60A {Bacillus subtilis} PDB: 1xtl_B 1s4i_B 1u3n_A
Probab=99.62 E-value=8.9e-16 Score=114.63 Aligned_cols=62 Identities=18% Similarity=0.210 Sum_probs=50.4
Q ss_pred CcceEEEEEc-CCCCeEEEEEEEEeCCceEEEEEEec--CC-CCceeEEEEcCCCCCCC-CCccchhhhh
Q 048434 28 PHSKAIAVLD-GSEGFKGTVSFYQEDGHHTVITVNLA--NL-KAGSHGFHVHESGFIRA-TTVGNILTHL 92 (110)
Q Consensus 28 ~~~kAvavl~-g~g~v~G~V~f~q~~~G~v~I~~~l~--GL-pPG~HGfHIHe~GDcs~-g~~g~~~~~~ 92 (110)
++.+|+|.++ ++++..|+|+|+| +++ +.|+++++ || |||.|||||||+|||++ +|.+ ...||
T Consensus 18 ~~~~a~a~l~~~~g~~vG~v~f~q-~~~-v~v~~~i~~~GL~~pG~hg~HIHe~Gd~s~~~c~S-aGgHf 84 (175)
T 1xtm_B 18 SAFGHHVQLVNREGKAVGFIEIKE-SDD-EGLDIHISANSLRPGASLGFHIHEKGSCVRPDFES-AGGHF 84 (175)
T ss_dssp CCCEEEEEEEETTCCEEEEEEEEE-CSS-SSEEEEEEECSCCTTCEECEEEESSCCCCTTTCGG-GCSBC
T ss_pred CCceEEEEEeCCCCCcEEEEEEEe-CCC-EEEEEEEEcCCCCCCCcceEEEecCCccCCCChhh-ccCcc
Confidence 4578999996 4566779999999 766 89999999 99 99999999999999995 4432 24454
No 25
>2jlp_A Extracellular superoxide dismutase (Cu-Zn); glycolisation, oxidoreductase, heparin binding, heparin-BIND oxidative stress, antioxidant; 1.70A {Homo sapiens}
Probab=99.59 E-value=3e-15 Score=115.75 Aligned_cols=64 Identities=19% Similarity=0.150 Sum_probs=53.9
Q ss_pred CcceEEEEEcC-------CCCeEEEEEEEEeCC-ceEEEEEEecCCCCc----eeEEEEcCCCCCCCCCccchhhhh
Q 048434 28 PHSKAIAVLDG-------SEGFKGTVSFYQEDG-HHTVITVNLANLKAG----SHGFHVHESGFIRATTVGNILTHL 92 (110)
Q Consensus 28 ~~~kAvavl~g-------~g~v~G~V~f~q~~~-G~v~I~~~l~GLpPG----~HGfHIHe~GDcs~g~~g~~~~~~ 92 (110)
...+|+|++++ .+++.|+|+|+|.++ +.+.|+++++||||| .|||||||+|||+++|.+. ..||
T Consensus 39 ~~~~Avc~l~~~a~~~~~~~~v~G~V~f~q~~~~~~v~v~~~l~GL~pG~~~g~HGfHIHe~Gd~s~gc~SA-GgHf 114 (222)
T 2jlp_A 39 GTLHAACQVQPSATLDAAQPRVTGVVLFRQLAPRAKLDAFFALEGFPTEPNSSSRAIHVHQFGDLSQGCEST-GPHY 114 (222)
T ss_dssp CCEEEEEEEEECTTCCTTSCCCEEEEEEEESSTTSCEEEEEEEECSCSSSSEEEEEEEEESCCCCTTGGGGG-CSBC
T ss_pred cceEEEEEeeccccccCCCCCcEEEEEEEEeCCCCeEEEEEEEeCCCCCCCCCceeEEEECCCCCCCCcccc-cCCC
Confidence 57899999973 267999999999874 468999999999998 8999999999999976433 5555
No 26
>3biy_A Histone acetyltransferase P300; P300 HAT, bisubstrate inhibitor, protein-inhibitor complex; HET: 01K; 1.70A {Homo sapiens}
Probab=33.11 E-value=47 Score=27.10 Aligned_cols=27 Identities=22% Similarity=0.252 Sum_probs=17.5
Q ss_pred EEEEEEeCCceEEEEEEecCCCCceeEEEEcCCCCCC
Q 048434 45 TVSFYQEDGHHTVITVNLANLKAGSHGFHVHESGFIR 81 (110)
Q Consensus 45 ~V~f~q~~~G~v~I~~~l~GLpPG~HGfHIHe~GDcs 81 (110)
.+.+.|.-+| |.|-. .|+||||||+-+
T Consensus 73 ~I~vFQ~idg-vDV~f---------F~m~vqEy~~~c 99 (380)
T 3biy_A 73 ALFAFEEIDG-VDLCF---------FGMHVQEYGSDC 99 (380)
T ss_dssp EEEEEEEETT-EEEEE---------EEEEEEEECTTS
T ss_pred EEEEEEEeCC-eEEEE---------EEEEeEeccccC
Confidence 3445555555 44443 899999999843
No 27
>3od9_A Putative exported protein; beta sandwich, C-terminal helix, hydrolase inhibitor; 1.41A {Aeromonas hydrophila}
Probab=29.54 E-value=1.5e+02 Score=20.94 Aligned_cols=31 Identities=13% Similarity=0.105 Sum_probs=26.6
Q ss_pred CCCCeEEEEEEEEeCCceEEEEEEecCCCCc
Q 048434 38 GSEGFKGTVSFYQEDGHHTVITVNLANLKAG 68 (110)
Q Consensus 38 g~g~v~G~V~f~q~~~G~v~I~~~l~GLpPG 68 (110)
|+|+....-.|+-.+++.+++-.++.||+|.
T Consensus 85 GSG~Y~~~dA~~i~~~~~l~ll~~V~gl~~~ 115 (135)
T 3od9_A 85 GSGSYLSADAFTLNPQEGLDSFNHVEGLAPN 115 (135)
T ss_dssp STTCCEEEEEEEEETTTEEEEEEEEEEECTT
T ss_pred cCCcceeEEEEEECCCCceEEEEEecccCCC
Confidence 7888888888888887558999999999995
No 28
>2mcm_A Macromomycin; apoprotein; 1.50A {Streptomyces macromomyceticus} SCOP: b.1.7.1
Probab=27.56 E-value=65 Score=22.12 Aligned_cols=23 Identities=26% Similarity=0.482 Sum_probs=17.7
Q ss_pred CCceEEEEEEecCCCCceeEEEEcC
Q 048434 52 DGHHTVITVNLANLKAGSHGFHVHE 76 (110)
Q Consensus 52 ~~G~v~I~~~l~GLpPG~HGfHIHe 76 (110)
.+| ..|+++.+||.||. +.|+=|
T Consensus 13 ~DG-q~VtV~~tGl~p~~-~y~v~~ 35 (112)
T 2mcm_A 13 SNG-QTVTVSATGLTPGT-VYHVGQ 35 (112)
T ss_dssp CTT-EEEEEEEESCCTTC-EEEEEE
T ss_pred CCC-CEEEEEEEccCCCC-eEEEEE
Confidence 367 79999999999994 555544
No 29
>1noa_A Neocarzinostatin; antibacterial protein; 1.50A {Streptomyces carzinostaticus} SCOP: b.1.7.1 PDB: 1nco_A 1o5p_A* 1j5h_A 1j5i_A* 2g0k_A 2g0l_A* 2cbq_A* 2cbo_A* 2cbm_A* 2cbt_A*
Probab=24.25 E-value=63 Score=22.24 Aligned_cols=23 Identities=35% Similarity=0.515 Sum_probs=17.7
Q ss_pred CCceEEEEEEecCCCCceeEEEEcC
Q 048434 52 DGHHTVITVNLANLKAGSHGFHVHE 76 (110)
Q Consensus 52 ~~G~v~I~~~l~GLpPG~HGfHIHe 76 (110)
.+| ..|+++.+||.||. +.|+=|
T Consensus 14 ~DG-q~VtV~~tGl~p~~-~y~v~~ 36 (113)
T 1noa_A 14 SDG-TVVKVAGAGLQAGT-AYDVGQ 36 (113)
T ss_dssp CTT-CEEEEEEESCCTTC-EEEEEE
T ss_pred CCC-CEEEEEEEccCCCC-eEEEEE
Confidence 357 69999999999994 556544
No 30
>2dle_A Receptor-type tyrosine-protein phosphatase ETA; protein-tyrosine phosphatase ETA, R-PTP-ETA, HPTP ETA, protein-tyrosine phosphatase receptor type J; NMR {Homo sapiens}
Probab=22.84 E-value=60 Score=20.52 Aligned_cols=20 Identities=10% Similarity=0.031 Sum_probs=16.3
Q ss_pred EEEecCCCCc-eeEEEEcCCC
Q 048434 59 TVNLANLKAG-SHGFHVHESG 78 (110)
Q Consensus 59 ~~~l~GLpPG-~HGfHIHe~G 78 (110)
.+.+.||.|| .+.|.|-..-
T Consensus 60 ~~~i~gL~PgT~Y~~~V~A~~ 80 (104)
T 2dle_A 60 RAVIPGLRSSTFYNITVCPVL 80 (104)
T ss_dssp EEECCSCCSSCEEEEEEEEES
T ss_pred EEEECCCCCCCEEEEEEEEEE
Confidence 3678999999 6999988753
No 31
>2edd_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.16 E-value=1.6e+02 Score=18.48 Aligned_cols=26 Identities=23% Similarity=0.206 Sum_probs=19.7
Q ss_pred EEEecCCCCc-eeEEEEcCCCCCCCCC
Q 048434 59 TVNLANLKAG-SHGFHVHESGFIRATT 84 (110)
Q Consensus 59 ~~~l~GLpPG-~HGfHIHe~GDcs~g~ 84 (110)
...+.||.|+ .+-|.|-.+.+...+.
T Consensus 79 ~~~v~gL~P~T~Y~f~V~A~n~~g~g~ 105 (123)
T 2edd_A 79 SYTATGLKPNTMYEFSVMVTKNRRSST 105 (123)
T ss_dssp EEEEESCCTTCEEEEEEEECCSSSCCC
T ss_pred EEEecCCCCCCEEEEEEEEeCCCcccC
Confidence 4688999999 6999998776554433
Done!