Query 048438
Match_columns 239
No_of_seqs 273 out of 1742
Neff 9.3
Searched_HMMs 29240
Date Mon Mar 25 16:33:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048438.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/048438hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3k40_A Aromatic-L-amino-acid d 100.0 3.7E-39 1.3E-43 286.0 20.3 217 1-239 231-456 (475)
2 4e1o_A HDC, histidine decarbox 100.0 4.7E-39 1.6E-43 285.8 20.4 217 1-239 238-463 (481)
3 3vp6_A Glutamate decarboxylase 100.0 2.4E-36 8.2E-41 270.2 24.0 232 1-239 245-490 (511)
4 1js3_A DDC;, DOPA decarboxylas 100.0 2.4E-35 8.2E-40 262.0 21.4 216 1-238 232-458 (486)
5 2qma_A Diaminobutyrate-pyruvat 100.0 1.6E-34 5.3E-39 257.6 24.1 219 2-239 256-481 (497)
6 2okj_A Glutamate decarboxylase 100.0 4.6E-34 1.6E-38 254.9 22.9 231 2-239 243-487 (504)
7 2jis_A Cysteine sulfinic acid 100.0 1.4E-33 4.9E-38 252.4 22.8 231 2-239 257-500 (515)
8 2dgk_A GAD-beta, GADB, glutama 100.0 5.7E-28 1.9E-32 212.7 17.8 213 4-237 187-418 (452)
9 3hbx_A GAD 1, glutamate decarb 100.0 1.8E-27 6.1E-32 212.3 17.9 212 4-237 202-428 (502)
10 3mc6_A Sphingosine-1-phosphate 99.9 1E-21 3.5E-26 174.6 17.0 205 4-237 206-421 (497)
11 3mad_A Sphingosine-1-phosphate 99.9 1.8E-21 6.1E-26 173.9 17.6 204 4-238 239-453 (514)
12 2z67_A O-phosphoseryl-tRNA(SEC 99.9 2.1E-22 7.3E-27 177.4 8.8 154 4-172 231-389 (456)
13 3f9t_A TDC, L-tyrosine decarbo 99.8 3.5E-20 1.2E-24 158.9 14.8 202 4-237 171-382 (397)
14 3e77_A Phosphoserine aminotran 99.8 7.9E-21 2.7E-25 163.2 10.4 198 5-238 153-360 (377)
15 3e9k_A Kynureninase; kynurenin 99.8 6.1E-20 2.1E-24 161.8 15.1 197 4-236 214-444 (465)
16 3bc8_A O-phosphoseryl-tRNA(SEC 99.8 2E-21 6.9E-26 169.3 4.3 149 4-163 198-350 (450)
17 3qm2_A Phosphoserine aminotran 99.8 3.2E-20 1.1E-24 160.1 8.0 192 5-238 167-370 (386)
18 3ffr_A Phosphoserine aminotran 99.8 1.6E-19 5.6E-24 153.1 11.4 200 4-237 130-348 (362)
19 3nnk_A Ureidoglycine-glyoxylat 99.8 2E-19 6.8E-24 155.4 10.0 204 4-238 138-374 (411)
20 3m5u_A Phosphoserine aminotran 99.8 7.1E-20 2.4E-24 156.5 6.7 193 5-238 141-345 (361)
21 3isl_A Purine catabolism prote 99.8 2.5E-19 8.5E-24 155.0 9.5 203 5-238 137-374 (416)
22 2yrr_A Aminotransferase, class 99.8 3.8E-19 1.3E-23 150.2 9.8 204 4-238 124-337 (353)
23 1elu_A L-cysteine/L-cystine C- 99.8 5E-18 1.7E-22 145.4 16.1 201 4-237 154-376 (390)
24 1iug_A Putative aspartate amin 99.8 8.5E-19 2.9E-23 148.3 10.6 200 5-237 122-332 (352)
25 3ke3_A Putative serine-pyruvat 99.8 5.3E-19 1.8E-23 152.0 8.9 200 5-238 136-361 (379)
26 1kmj_A Selenocysteine lyase; p 99.8 6.9E-18 2.4E-22 145.2 15.6 203 4-238 164-390 (406)
27 3zrp_A Serine-pyruvate aminotr 99.8 4.1E-18 1.4E-22 145.6 13.1 201 4-237 127-347 (384)
28 1qz9_A Kynureninase; kynurenin 99.8 6.8E-18 2.3E-22 146.1 14.2 192 4-232 165-380 (416)
29 2dr1_A PH1308 protein, 386AA l 99.8 2.1E-18 7.4E-23 147.6 10.6 203 4-237 146-363 (386)
30 3kgw_A Alanine-glyoxylate amin 99.8 1.8E-18 6E-23 148.3 9.7 202 4-236 148-370 (393)
31 2z9v_A Aspartate aminotransfer 99.8 2.6E-18 9E-23 147.5 10.1 202 4-236 134-354 (392)
32 2huf_A Alanine glyoxylate amin 99.8 1.5E-18 5E-23 149.2 8.3 203 5-238 145-367 (393)
33 1m32_A 2-aminoethylphosphonate 99.7 1.9E-17 6.5E-22 140.4 14.4 202 5-237 132-349 (366)
34 1t3i_A Probable cysteine desul 99.7 2.2E-17 7.7E-22 142.7 15.1 202 4-237 169-397 (420)
35 4hvk_A Probable cysteine desul 99.7 1.6E-17 5.4E-22 141.6 13.5 196 4-237 138-357 (382)
36 1vjo_A Alanine--glyoxylate ami 99.7 5E-18 1.7E-22 145.9 9.4 203 5-238 160-379 (393)
37 3f0h_A Aminotransferase; RER07 99.7 8.1E-18 2.8E-22 143.7 10.5 203 4-238 144-359 (376)
38 3hl2_A O-phosphoseryl-tRNA(SEC 99.7 2.2E-18 7.5E-23 149.1 6.2 145 5-162 216-367 (501)
39 3cai_A Possible aminotransfera 99.7 5.8E-17 2E-21 139.8 14.1 200 4-237 165-393 (406)
40 3lvm_A Cysteine desulfurase; s 99.7 3.4E-16 1.2E-20 135.7 18.6 159 4-173 163-326 (423)
41 1wyu_A Glycine dehydrogenase ( 99.7 1.1E-16 3.6E-21 140.2 15.0 199 4-237 196-424 (438)
42 4eb5_A Probable cysteine desul 99.7 4.6E-17 1.6E-21 139.1 11.4 156 4-173 138-298 (382)
43 2bkw_A Alanine-glyoxylate amin 99.7 6E-17 2E-21 138.5 11.2 191 5-229 138-356 (385)
44 2ch1_A 3-hydroxykynurenine tra 99.7 2E-17 6.7E-22 142.2 7.2 203 5-238 144-367 (396)
45 1eg5_A Aminotransferase; PLP-d 99.7 1.5E-15 5.2E-20 129.6 18.4 157 4-173 139-301 (384)
46 3vax_A Putative uncharacterize 99.7 1.7E-15 5.9E-20 130.2 18.1 160 4-173 159-325 (400)
47 1v72_A Aldolase; PLP-dependent 99.7 1.7E-16 6E-21 134.2 11.7 192 4-237 141-337 (356)
48 2fyf_A PSAT, phosphoserine ami 99.7 4.1E-17 1.4E-21 140.8 6.4 200 4-238 165-383 (398)
49 2c0r_A PSAT, phosphoserine ami 99.7 3.4E-16 1.1E-20 133.2 11.6 193 4-237 142-345 (362)
50 3tqx_A 2-amino-3-ketobutyrate 99.7 1.4E-15 4.8E-20 130.7 14.3 200 2-237 173-380 (399)
51 2w8t_A SPT, serine palmitoyltr 99.6 6.2E-15 2.1E-19 128.5 17.5 199 4-238 194-400 (427)
52 2e7j_A SEP-tRNA:Cys-tRNA synth 99.6 9E-17 3.1E-21 136.8 3.2 155 4-172 147-308 (371)
53 2cb1_A O-acetyl homoserine sul 99.6 1.2E-14 4.2E-19 126.1 15.4 160 4-171 140-335 (412)
54 2x3l_A ORN/Lys/Arg decarboxyla 99.6 3.2E-15 1.1E-19 131.2 11.8 189 5-238 147-339 (446)
55 1wyu_B Glycine dehydrogenase s 99.6 1.5E-15 5.2E-20 134.3 9.6 201 5-237 204-425 (474)
56 1rv3_A Serine hydroxymethyltra 99.6 1.9E-15 6.6E-20 133.9 10.0 159 5-172 194-363 (483)
57 1fc4_A 2-amino-3-ketobutyrate 99.6 8.1E-15 2.8E-19 126.2 12.9 199 4-237 177-381 (401)
58 1svv_A Threonine aldolase; str 99.6 9.1E-15 3.1E-19 123.6 13.0 192 3-237 144-342 (359)
59 2vyc_A Biodegradative arginine 99.6 8.1E-15 2.8E-19 136.2 12.3 152 2-161 310-481 (755)
60 2dkj_A Serine hydroxymethyltra 99.6 1.2E-14 4.1E-19 125.2 11.3 192 6-233 165-364 (407)
61 2fnu_A Aminotransferase; prote 99.6 1.2E-14 4.1E-19 123.8 10.6 149 5-161 122-275 (375)
62 2a7v_A Serine hydroxymethyltra 99.6 5.1E-14 1.7E-18 124.7 14.0 156 13-174 210-375 (490)
63 1w23_A Phosphoserine aminotran 99.5 1.5E-14 5.1E-19 122.6 8.6 194 4-237 141-344 (360)
64 2vi8_A Serine hydroxymethyltra 99.5 4.5E-14 1.5E-18 121.5 11.5 185 14-233 171-363 (405)
65 1bs0_A Protein (8-amino-7-oxon 99.5 1E-13 3.5E-18 118.6 13.6 195 5-237 169-371 (384)
66 3pj0_A LMO0305 protein; struct 99.5 1.7E-13 5.6E-18 116.2 14.6 195 5-235 138-341 (359)
67 3lws_A Aromatic amino acid bet 99.5 1.1E-13 3.8E-18 117.3 13.4 190 7-235 138-338 (357)
68 1gc0_A Methionine gamma-lyase; 99.5 6.3E-14 2.1E-18 121.1 11.7 151 4-173 150-320 (398)
69 2bwn_A 5-aminolevulinate synth 99.5 4.9E-14 1.7E-18 121.4 10.9 199 4-237 178-384 (401)
70 3a2b_A Serine palmitoyltransfe 99.5 8.3E-14 2.9E-18 119.8 11.3 197 4-237 173-376 (398)
71 1c4k_A Protein (ornithine deca 99.5 6.9E-14 2.4E-18 129.2 11.4 149 6-161 283-447 (730)
72 3dzz_A Putative pyridoxal 5'-p 99.5 1.2E-13 4.1E-18 118.2 11.7 198 4-231 160-369 (391)
73 3kki_A CAI-1 autoinducer synth 99.5 4.7E-13 1.6E-17 115.7 15.4 195 5-237 187-388 (409)
74 1cs1_A CGS, protein (cystathio 99.5 2.7E-13 9.3E-18 116.4 13.8 150 5-173 138-306 (386)
75 3qhx_A Cystathionine gamma-syn 99.5 5.7E-13 1.9E-17 115.0 15.5 151 4-173 151-320 (392)
76 2ctz_A O-acetyl-L-homoserine s 99.5 4.6E-13 1.6E-17 116.6 15.0 161 4-173 144-346 (421)
77 2gb3_A Aspartate aminotransfer 99.5 4.4E-13 1.5E-17 116.0 14.7 154 5-172 175-336 (409)
78 3dr4_A Putative perosamine syn 99.5 5E-14 1.7E-18 121.1 8.3 199 13-238 150-378 (391)
79 1b9h_A AHBA synthase, protein 99.5 2.6E-13 8.8E-18 116.4 12.7 155 13-173 132-299 (388)
80 3a9z_A Selenocysteine lyase; P 99.5 1.2E-13 4.1E-18 120.1 10.2 158 4-173 175-352 (432)
81 1pff_A Methionine gamma-lyase; 99.5 9.3E-14 3.2E-18 116.7 8.6 80 5-91 84-166 (331)
82 3uwc_A Nucleotide-sugar aminot 99.5 1.6E-13 5.4E-18 117.0 9.8 142 13-161 131-277 (374)
83 1lc5_A COBD, L-threonine-O-3-p 99.5 2.4E-12 8.1E-17 109.5 17.0 189 5-232 147-342 (364)
84 1qgn_A Protein (cystathionine 99.5 1.5E-12 5.2E-17 114.1 15.7 148 6-173 202-368 (445)
85 3frk_A QDTB; aminotransferase, 99.5 2.3E-13 7.9E-18 116.2 10.3 139 13-159 130-272 (373)
86 2rfv_A Methionine gamma-lyase; 99.5 2.8E-13 9.6E-18 116.9 10.6 150 4-173 149-319 (398)
87 3gbx_A Serine hydroxymethyltra 99.4 1.7E-13 5.8E-18 118.4 8.6 155 5-173 170-328 (420)
88 3acz_A Methionine gamma-lyase; 99.4 1.3E-12 4.3E-17 112.6 14.1 150 5-173 145-313 (389)
89 3g0t_A Putative aminotransfera 99.4 4.3E-12 1.5E-16 110.4 16.3 206 5-237 183-421 (437)
90 1j32_A Aspartate aminotransfer 99.4 8E-13 2.8E-17 113.2 11.4 191 5-231 164-367 (388)
91 2eh6_A Acoat, acetylornithine 99.4 3.8E-12 1.3E-16 108.4 15.3 186 4-237 172-362 (375)
92 3cog_A Cystathionine gamma-lya 99.4 1.8E-13 6.3E-18 118.5 7.1 150 5-173 152-321 (403)
93 1n8p_A Cystathionine gamma-lya 99.4 9.1E-13 3.1E-17 113.8 11.0 149 5-173 139-314 (393)
94 1vef_A Acetylornithine/acetyl- 99.4 3.6E-12 1.2E-16 109.5 14.5 188 5-237 186-381 (395)
95 1e5e_A MGL, methionine gamma-l 99.4 1.6E-11 5.3E-16 106.4 18.3 150 5-173 148-318 (404)
96 2fq6_A Cystathionine beta-lyas 99.4 7.3E-12 2.5E-16 108.9 16.0 149 5-173 168-337 (415)
97 1jg8_A L-ALLO-threonine aldola 99.4 2E-13 7E-18 115.1 5.9 189 4-237 132-330 (347)
98 1v2d_A Glutamine aminotransfer 99.4 1.1E-12 3.7E-17 112.2 10.3 191 4-232 152-352 (381)
99 3ri6_A O-acetylhomoserine sulf 99.4 3.7E-12 1.3E-16 111.3 13.8 161 4-173 167-356 (430)
100 3ecd_A Serine hydroxymethyltra 99.4 7.1E-13 2.4E-17 114.6 9.2 155 5-173 173-329 (425)
101 1iay_A ACC synthase 2, 1-amino 99.4 3E-12 1E-16 111.3 13.1 197 4-231 188-406 (428)
102 3n0l_A Serine hydroxymethyltra 99.4 2.9E-12 1E-16 110.6 12.8 155 5-173 165-321 (417)
103 3ftb_A Histidinol-phosphate am 99.4 2.4E-11 8.2E-16 102.8 18.2 189 5-231 145-342 (361)
104 1o4s_A Aspartate aminotransfer 99.4 1.4E-12 4.8E-17 112.0 10.4 188 5-232 175-370 (389)
105 3nmy_A Xometc, cystathionine g 99.4 4.1E-12 1.4E-16 110.0 13.3 151 4-173 152-322 (400)
106 3nra_A Aspartate aminotransfer 99.4 3.5E-13 1.2E-17 116.0 6.4 195 5-232 180-386 (407)
107 3h7f_A Serine hydroxymethyltra 99.4 6.9E-12 2.4E-16 109.9 14.5 155 5-174 186-347 (447)
108 1xi9_A Putative transaminase; 99.4 4.1E-12 1.4E-16 109.7 12.6 191 5-231 175-383 (406)
109 3dyd_A Tyrosine aminotransfera 99.4 4.4E-12 1.5E-16 110.4 12.7 200 5-231 192-404 (427)
110 2zc0_A Alanine glyoxylate tran 99.4 1.7E-12 5.9E-17 111.8 9.9 197 4-233 174-385 (407)
111 3ruy_A Ornithine aminotransfer 99.4 1.8E-11 6.2E-16 104.9 16.2 190 4-237 182-378 (392)
112 4dq6_A Putative pyridoxal phos 99.4 1.8E-12 6.2E-17 110.9 9.7 197 5-231 165-373 (391)
113 3euc_A Histidinol-phosphate am 99.4 2.2E-12 7.7E-17 109.6 10.2 184 5-231 158-349 (367)
114 3l8a_A METC, putative aminotra 99.4 2.2E-12 7.6E-17 112.0 10.0 200 4-232 194-403 (421)
115 1c7n_A Cystalysin; transferase 99.3 8.8E-12 3E-16 107.1 12.8 199 4-233 164-375 (399)
116 2c81_A Glutamine-2-deoxy-scyll 99.3 7.2E-12 2.5E-16 108.6 12.2 153 14-172 137-311 (418)
117 1u08_A Hypothetical aminotrans 99.3 1.2E-12 4.2E-17 112.1 7.2 197 4-232 163-371 (386)
118 1bw0_A TAT, protein (tyrosine 99.3 6.7E-12 2.3E-16 108.5 11.9 202 5-231 178-393 (416)
119 3ffh_A Histidinol-phosphate am 99.3 2.6E-11 8.8E-16 102.9 15.0 187 4-231 155-347 (363)
120 1gd9_A Aspartate aminotransfer 99.3 9.7E-12 3.3E-16 106.5 12.2 193 5-232 161-367 (389)
121 2z61_A Probable aspartate amin 99.3 2.9E-12 1E-16 109.1 8.7 186 5-231 155-351 (370)
122 2o0r_A RV0858C (N-succinyldiam 99.3 5.2E-12 1.8E-16 109.2 10.2 159 4-173 160-325 (411)
123 3piu_A 1-aminocyclopropane-1-c 99.3 9.5E-12 3.2E-16 108.4 11.9 204 3-233 190-413 (435)
124 3op7_A Aminotransferase class 99.3 2.9E-11 9.9E-16 103.0 14.2 194 5-233 155-353 (375)
125 2oga_A Transaminase; PLP-depen 99.3 1E-11 3.6E-16 107.0 11.4 142 14-162 158-303 (399)
126 3hdo_A Histidinol-phosphate am 99.3 3.2E-11 1.1E-15 102.3 13.8 185 6-231 151-336 (360)
127 3i16_A Aluminum resistance pro 99.3 1.6E-11 5.5E-16 107.0 12.1 152 4-173 176-341 (427)
128 1fg7_A Histidinol phosphate am 99.3 1.2E-10 4.2E-15 98.8 17.4 186 5-231 147-339 (356)
129 1o69_A Aminotransferase; struc 99.3 2.3E-11 7.8E-16 104.7 12.9 158 5-173 123-289 (394)
130 3jzl_A Putative cystathionine 99.3 2.9E-11 1E-15 104.9 13.6 150 5-173 160-324 (409)
131 1ibj_A CBL, cystathionine beta 99.3 1.2E-11 4.2E-16 108.9 11.3 79 5-90 218-298 (464)
132 3kax_A Aminotransferase, class 99.3 3.9E-11 1.3E-15 102.2 14.0 195 5-232 157-366 (383)
133 3ndn_A O-succinylhomoserine su 99.3 2.5E-11 8.4E-16 105.5 12.9 150 5-173 167-335 (414)
134 1d2f_A MALY protein; aminotran 99.3 2.4E-11 8.1E-16 104.2 12.6 199 4-233 162-371 (390)
135 1mdo_A ARNB aminotransferase; 99.3 9.9E-12 3.4E-16 106.5 10.0 149 14-172 134-304 (393)
136 2zyj_A Alpha-aminodipate amino 99.3 6.7E-12 2.3E-16 107.9 8.8 189 9-233 168-374 (397)
137 1vp4_A Aminotransferase, putat 99.3 1.5E-11 5E-16 106.9 10.9 194 4-233 187-399 (425)
138 3cq5_A Histidinol-phosphate am 99.3 4.2E-11 1.4E-15 102.0 13.3 183 5-231 165-349 (369)
139 1yiz_A Kynurenine aminotransfe 99.3 4.2E-12 1.4E-16 110.3 7.2 160 4-173 182-354 (429)
140 3ly1_A Putative histidinol-pho 99.3 4.1E-11 1.4E-15 101.2 12.8 187 4-231 141-333 (354)
141 3fdb_A Beta C-S lyase, putativ 99.3 3.1E-11 1.1E-15 102.7 11.7 196 5-232 151-357 (377)
142 3get_A Histidinol-phosphate am 99.3 8.1E-11 2.8E-15 99.9 13.9 186 4-231 153-348 (365)
143 3hvy_A Cystathionine beta-lyas 99.3 1.3E-10 4.5E-15 101.2 15.2 152 4-173 176-341 (427)
144 2oqx_A Tryptophanase; lyase, p 99.3 5.5E-12 1.9E-16 110.7 6.5 160 4-172 183-361 (467)
145 1ax4_A Tryptophanase; tryptoph 99.3 3.8E-12 1.3E-16 111.8 5.4 159 4-170 183-358 (467)
146 3h14_A Aminotransferase, class 99.3 6.2E-11 2.1E-15 101.6 12.8 192 5-232 162-363 (391)
147 3nx3_A Acoat, acetylornithine 99.2 1.3E-10 4.5E-15 99.7 14.7 191 5-237 180-379 (395)
148 1sff_A 4-aminobutyrate aminotr 99.2 4.9E-10 1.7E-14 97.0 17.6 201 4-237 199-408 (426)
149 3p1t_A Putative histidinol-pho 99.2 2E-10 6.8E-15 96.2 14.7 181 5-231 136-318 (337)
150 2dou_A Probable N-succinyldiam 99.2 5.9E-11 2E-15 101.2 11.1 192 5-232 159-359 (376)
151 1b5p_A Protein (aspartate amin 99.2 1.7E-10 5.9E-15 98.8 13.7 190 5-231 165-365 (385)
152 2o1b_A Aminotransferase, class 99.2 5.4E-11 1.8E-15 102.7 10.6 192 5-232 182-384 (404)
153 3qgu_A LL-diaminopimelate amin 99.2 5.2E-11 1.8E-15 104.0 10.5 199 5-232 210-421 (449)
154 2x5d_A Probable aminotransfera 99.2 4.6E-11 1.6E-15 103.2 10.1 197 5-232 173-379 (412)
155 1s0a_A Adenosylmethionine-8-am 99.2 2.6E-10 8.9E-15 99.0 14.9 193 4-237 204-408 (429)
156 3ht4_A Aluminum resistance pro 99.2 1.5E-10 5.2E-15 101.0 12.8 151 4-172 165-329 (431)
157 2ord_A Acoat, acetylornithine 99.2 7.4E-11 2.5E-15 101.4 10.5 189 4-236 183-380 (397)
158 2x5f_A Aspartate_tyrosine_phen 99.2 4.6E-10 1.6E-14 97.5 15.6 193 4-232 189-409 (430)
159 2ez2_A Beta-tyrosinase, tyrosi 99.2 8.2E-11 2.8E-15 103.0 10.9 158 6-172 176-350 (456)
160 3aow_A Putative uncharacterize 99.2 1.6E-10 5.6E-15 101.2 12.7 196 4-233 216-426 (448)
161 3fkd_A L-threonine-O-3-phospha 99.2 8.3E-11 2.8E-15 99.3 10.4 188 5-231 130-323 (350)
162 3b8x_A WBDK, pyridoxamine 5-ph 99.2 4.3E-10 1.5E-14 96.4 14.1 157 5-172 129-311 (390)
163 3dxv_A Alpha-amino-epsilon-cap 99.2 1.4E-09 4.8E-14 94.7 17.5 199 3-237 200-409 (439)
164 2aeu_A Hypothetical protein MJ 99.2 1.8E-10 6.3E-15 98.6 11.4 78 5-86 141-221 (374)
165 3if2_A Aminotransferase; YP_26 99.2 3.6E-10 1.2E-14 98.4 13.5 81 4-85 206-289 (444)
166 3g7q_A Valine-pyruvate aminotr 99.2 3.8E-10 1.3E-14 97.3 13.4 197 5-232 181-394 (417)
167 2cjg_A L-lysine-epsilon aminot 99.2 1.2E-09 4.1E-14 95.7 16.3 193 4-237 231-432 (449)
168 3fvs_A Kynurenine--oxoglutarat 99.1 3.5E-10 1.2E-14 97.8 12.5 160 4-172 174-345 (422)
169 2po3_A 4-dehydrase; external a 99.1 1.1E-09 3.6E-14 95.1 15.2 155 5-172 139-304 (424)
170 1z7d_A Ornithine aminotransfer 99.1 8.5E-10 2.9E-14 96.2 14.6 193 4-237 212-413 (433)
171 1ohv_A 4-aminobutyrate aminotr 99.1 1.4E-09 4.7E-14 96.0 16.0 186 4-237 258-455 (472)
172 3ju7_A Putative PLP-dependent 99.1 2.3E-10 7.8E-15 98.1 10.4 135 13-156 135-274 (377)
173 3ele_A Amino transferase; RER0 99.1 3.6E-10 1.2E-14 97.0 11.3 193 5-231 173-376 (398)
174 2oat_A Ornithine aminotransfer 99.1 1.9E-10 6.5E-15 100.6 9.7 194 4-237 223-423 (439)
175 3nyt_A Aminotransferase WBPE; 99.1 1.8E-10 6.2E-15 98.0 9.2 139 13-159 129-271 (367)
176 4adb_A Succinylornithine trans 99.1 4.2E-10 1.4E-14 96.7 11.1 193 5-237 184-384 (406)
177 2eo5_A 419AA long hypothetical 99.1 1.4E-09 4.8E-14 94.3 14.4 186 4-237 212-402 (419)
178 2pb2_A Acetylornithine/succiny 99.1 3.2E-10 1.1E-14 98.4 10.3 192 5-236 202-401 (420)
179 3e2y_A Kynurenine-oxoglutarate 99.1 2.4E-10 8.1E-15 98.4 9.2 161 4-173 167-339 (410)
180 3ei9_A LL-diaminopimelate amin 99.1 2.5E-10 8.7E-15 99.2 9.4 191 5-232 199-409 (432)
181 3oks_A 4-aminobutyrate transam 99.1 4.9E-09 1.7E-13 91.8 17.7 198 4-237 227-435 (451)
182 1uu1_A Histidinol-phosphate am 99.1 2.5E-09 8.6E-14 89.7 15.0 181 5-232 139-320 (335)
183 1zod_A DGD, 2,2-dialkylglycine 99.1 5.4E-10 1.8E-14 97.1 10.8 206 4-237 203-416 (433)
184 3tcm_A Alanine aminotransferas 99.1 3.6E-09 1.2E-13 94.0 16.2 156 2-169 235-418 (500)
185 3ezs_A Aminotransferase ASPB; 99.1 5.3E-10 1.8E-14 95.1 10.3 186 5-232 155-356 (376)
186 3n5m_A Adenosylmethionine-8-am 99.1 2.5E-09 8.4E-14 93.6 14.3 207 4-237 215-436 (452)
187 3b46_A Aminotransferase BNA3; 99.1 1.6E-10 5.3E-15 101.2 6.3 162 4-173 201-369 (447)
188 3a8u_X Omega-amino acid--pyruv 99.0 2.5E-09 8.7E-14 93.4 13.8 202 4-237 219-431 (449)
189 3ou5_A Serine hydroxymethyltra 99.0 1.2E-09 4E-14 94.5 11.1 164 4-175 203-376 (490)
190 2r2n_A Kynurenine/alpha-aminoa 99.0 6.2E-09 2.1E-13 90.3 15.4 194 5-232 191-404 (425)
191 3asa_A LL-diaminopimelate amin 99.0 8.6E-10 2.9E-14 94.9 9.8 155 5-172 164-334 (400)
192 4ffc_A 4-aminobutyrate aminotr 99.0 6.5E-09 2.2E-13 91.1 15.5 198 4-237 225-433 (453)
193 3hmu_A Aminotransferase, class 99.0 8.5E-09 2.9E-13 90.9 16.1 205 4-237 223-436 (472)
194 3b1d_A Betac-S lyase; HET: PLP 98.6 3.3E-11 1.1E-15 103.5 0.0 199 5-233 165-375 (392)
195 3i5t_A Aminotransferase; pyrid 99.0 8.5E-09 2.9E-13 91.0 15.3 205 4-236 221-437 (476)
196 3i4j_A Aminotransferase, class 99.0 8.2E-09 2.8E-13 89.6 15.0 205 4-237 190-412 (430)
197 3n75_A LDC, lysine decarboxyla 99.0 2.7E-10 9.3E-15 104.8 5.8 146 5-161 298-456 (715)
198 3ez1_A Aminotransferase MOCR f 99.0 2.7E-09 9.3E-14 92.3 11.5 195 4-233 172-396 (423)
199 3jtx_A Aminotransferase; NP_28 99.0 3.5E-09 1.2E-13 90.6 11.8 156 5-173 169-335 (396)
200 3ppl_A Aspartate aminotransfer 99.0 2.3E-09 8E-14 92.9 10.3 194 5-233 181-401 (427)
201 3gju_A Putative aminotransfera 99.0 2.9E-09 9.9E-14 93.5 10.5 212 4-237 221-440 (460)
202 4a6r_A Omega transaminase; tra 99.0 7.4E-09 2.5E-13 90.8 12.7 205 4-237 219-433 (459)
203 3dod_A Adenosylmethionine-8-am 98.9 2.3E-08 7.7E-13 87.4 14.7 206 4-237 210-427 (448)
204 3tfu_A Adenosylmethionine-8-am 98.9 1.2E-08 4.1E-13 89.6 12.5 193 4-237 233-437 (457)
205 3bb8_A CDP-4-keto-6-deoxy-D-gl 98.9 5.1E-08 1.7E-12 84.9 15.0 145 5-159 159-333 (437)
206 3l44_A Glutamate-1-semialdehyd 98.9 3.3E-08 1.1E-12 85.8 13.4 154 4-173 202-366 (434)
207 3fq8_A Glutamate-1-semialdehyd 98.9 1.4E-08 4.6E-13 88.1 10.7 84 4-92 199-286 (427)
208 3t18_A Aminotransferase class 98.8 1.7E-08 5.7E-13 87.0 10.5 189 6-235 180-396 (413)
209 2epj_A Glutamate-1-semialdehyd 98.8 6.5E-08 2.2E-12 84.0 14.1 154 4-173 203-367 (434)
210 4e77_A Glutamate-1-semialdehyd 98.8 6.3E-08 2.2E-12 84.0 13.9 84 4-92 200-287 (429)
211 3k28_A Glutamate-1-semialdehyd 98.8 7E-08 2.4E-12 83.7 13.9 153 4-173 200-363 (429)
212 3d6k_A Putative aminotransfera 98.8 2.9E-08 1E-12 85.9 10.3 192 5-232 179-398 (422)
213 3rq1_A Aminotransferase class 98.8 2.3E-08 7.8E-13 86.3 9.1 186 6-231 181-394 (418)
214 2cy8_A D-phgat, D-phenylglycin 98.8 6.8E-08 2.3E-12 84.4 12.1 159 4-173 201-367 (453)
215 1ajs_A Aspartate aminotransfer 98.7 8.8E-09 3E-13 88.7 5.5 146 5-159 184-353 (412)
216 3ihj_A Alanine aminotransferas 98.7 1.9E-07 6.6E-12 82.8 13.7 157 4-172 235-421 (498)
217 3fsl_A Aromatic-amino-acid ami 98.7 3.6E-08 1.2E-12 84.3 7.9 149 4-159 173-342 (397)
218 2ay1_A Aroat, aromatic amino a 98.7 5.9E-09 2E-13 89.2 1.9 79 5-85 170-257 (394)
219 1yaa_A Aspartate aminotransfer 98.6 1.5E-08 5.1E-13 87.3 3.8 155 5-169 177-362 (412)
220 2e7u_A Glutamate-1-semialdehyd 98.6 7.5E-07 2.6E-11 77.0 14.0 154 4-173 199-363 (424)
221 3meb_A Aspartate aminotransfer 98.6 1.1E-07 3.7E-12 83.1 8.4 78 4-83 202-289 (448)
222 3bwn_A AT1G70560, L-tryptophan 98.6 9.7E-08 3.3E-12 82.0 7.8 140 5-161 158-309 (391)
223 4f4e_A Aromatic-amino-acid ami 98.6 2.5E-08 8.5E-13 86.3 3.5 152 4-159 195-364 (420)
224 7aat_A Aspartate aminotransfer 98.6 5.3E-08 1.8E-12 83.5 5.4 80 4-85 175-264 (401)
225 2q7w_A Aspartate aminotransfer 98.5 7.1E-08 2.4E-12 82.4 5.1 150 5-167 173-348 (396)
226 4eu1_A Mitochondrial aspartate 98.5 2E-07 6.8E-12 80.2 7.2 157 4-169 183-362 (409)
227 3f6t_A Aspartate aminotransfer 98.5 5.9E-07 2E-11 80.3 9.8 81 4-88 244-330 (533)
228 4atq_A 4-aminobutyrate transam 98.3 1.2E-05 4E-10 70.5 14.0 200 4-235 226-437 (456)
229 2yky_A Beta-transaminase; tran 97.5 1.9E-07 6.6E-12 82.1 0.0 159 4-173 233-398 (465)
230 4ao9_A Beta-phenylalanine amin 98.0 5.1E-05 1.7E-09 66.4 11.4 136 5-152 221-360 (454)
231 4e3q_A Pyruvate transaminase; 97.9 1.5E-05 5.2E-10 70.1 5.7 80 5-87 237-321 (473)
232 4a0g_A Adenosylmethionine-8-am 97.7 4.3E-05 1.5E-09 71.7 5.6 80 5-87 595-680 (831)
233 2hox_A ALLIIN lyase 1; cystein 97.5 0.00015 5.2E-09 62.8 7.2 132 5-158 197-341 (427)
234 2zy4_A L-aspartate beta-decarb 97.1 0.001 3.5E-08 59.5 7.8 81 5-88 246-332 (546)
235 3k7y_A Aspartate aminotransfer 91.6 0.19 6.4E-06 43.0 4.7 78 7-85 176-263 (405)
236 4h51_A Aspartate aminotransfer 90.5 0.4 1.4E-05 41.2 5.7 81 5-86 191-280 (420)
237 4gqr_A Pancreatic alpha-amylas 76.6 1.3 4.5E-05 38.2 2.7 29 14-42 70-98 (496)
238 1k4i_A 3,4-dihydroxy-2-butanon 72.7 4.1 0.00014 31.8 4.2 38 1-38 164-211 (233)
239 3rag_A Uncharacterized protein 71.4 5.3 0.00018 31.5 4.6 39 2-42 8-46 (242)
240 1g94_A Alpha-amylase; beta-alp 70.1 2.3 7.9E-05 36.6 2.6 30 13-42 57-86 (448)
241 3bh4_A Alpha-amylase; calcium, 69.7 2.7 9.3E-05 36.5 3.0 30 13-42 71-100 (483)
242 1mxg_A Alpha amylase; hyperthe 68.7 3 0.0001 35.8 3.0 30 13-42 79-108 (435)
243 1hvx_A Alpha-amylase; hydrolas 68.7 2.7 9.3E-05 36.9 2.8 30 13-42 74-103 (515)
244 1ud2_A Amylase, alpha-amylase; 68.7 3 0.0001 36.2 3.0 30 13-42 73-102 (480)
245 1wpc_A Glucan 1,4-alpha-maltoh 68.5 3.1 0.0001 36.2 3.0 30 13-42 75-104 (485)
246 1lwj_A 4-alpha-glucanotransfer 68.0 2.8 9.7E-05 35.9 2.7 30 13-42 62-91 (441)
247 2guy_A Alpha-amylase A; (beta- 67.7 2.9 9.9E-05 36.2 2.7 31 12-42 89-119 (478)
248 1gcy_A Glucan 1,4-alpha-maltot 65.7 3.4 0.00012 36.4 2.8 28 15-42 87-114 (527)
249 3dhu_A Alpha-amylase; structur 65.2 3 0.0001 35.8 2.3 29 14-42 77-105 (449)
250 1ht6_A AMY1, alpha-amylase iso 64.5 3.6 0.00012 34.9 2.6 28 15-42 63-90 (405)
251 4aie_A Glucan 1,6-alpha-glucos 63.9 4 0.00014 35.7 2.9 30 13-42 72-101 (549)
252 1wza_A Alpha-amylase A; hydrol 61.9 3.8 0.00013 35.6 2.4 29 14-42 75-103 (488)
253 1jae_A Alpha-amylase; glycosid 61.2 3.4 0.00012 35.8 1.9 29 14-42 68-96 (471)
254 2dh2_A 4F2 cell-surface antige 61.0 4.2 0.00014 34.8 2.4 30 13-42 74-103 (424)
255 2aaa_A Alpha-amylase; glycosid 60.4 4 0.00014 35.5 2.2 31 12-42 89-119 (484)
256 2z1k_A (NEO)pullulanase; hydro 60.3 4.2 0.00014 35.1 2.3 31 12-42 88-118 (475)
257 1j0h_A Neopullulanase; beta-al 59.1 5.2 0.00018 35.8 2.8 30 13-42 215-244 (588)
258 2wc7_A Alpha amylase, catalyti 58.7 4.2 0.00014 35.3 2.1 30 13-42 95-124 (488)
259 3bc9_A AMYB, alpha amylase, ca 58.6 5.6 0.00019 35.7 2.9 30 13-42 201-230 (599)
260 1m53_A Isomaltulose synthase; 58.6 4.5 0.00016 36.0 2.3 30 13-42 85-114 (570)
261 3edf_A FSPCMD, cyclomaltodextr 58.5 5.3 0.00018 35.8 2.7 29 14-42 192-220 (601)
262 1zja_A Trehalulose synthase; s 58.4 5.3 0.00018 35.4 2.7 30 13-42 72-101 (557)
263 1qho_A Alpha-amylase; glycosid 58.4 5.2 0.00018 36.5 2.7 30 13-42 100-129 (686)
264 1cyg_A Cyclodextrin glucanotra 58.2 5.3 0.00018 36.4 2.7 30 13-42 104-133 (680)
265 1d3c_A Cyclodextrin glycosyltr 57.8 5.4 0.00019 36.4 2.7 30 13-42 108-137 (686)
266 1ua7_A Alpha-amylase; beta-alp 56.9 3.9 0.00013 34.8 1.5 29 14-42 68-96 (422)
267 1uok_A Oligo-1,6-glucosidase; 56.9 5 0.00017 35.6 2.3 30 13-42 71-100 (558)
268 1wzl_A Alpha-amylase II; pullu 55.6 5.4 0.00018 35.6 2.2 30 13-42 212-241 (585)
269 2ze0_A Alpha-glucosidase; TIM 55.5 5.3 0.00018 35.4 2.2 29 14-42 72-100 (555)
270 3bmv_A Cyclomaltodextrin gluca 55.2 6.4 0.00022 35.9 2.7 30 13-42 109-138 (683)
271 3aj7_A Oligo-1,6-glucosidase; 55.1 6.5 0.00022 35.2 2.7 30 13-42 80-109 (589)
272 4aee_A Alpha amylase, catalyti 54.2 5.8 0.0002 36.3 2.3 30 13-42 304-333 (696)
273 4aef_A Neopullulanase (alpha-a 54.0 6.3 0.00021 35.6 2.4 31 12-42 277-307 (645)
274 1ea9_C Cyclomaltodextrinase; h 53.7 5.9 0.0002 35.4 2.2 30 13-42 211-240 (583)
275 1g5a_A Amylosucrase; glycosylt 53.5 7.1 0.00024 35.2 2.7 29 14-42 156-184 (628)
276 2zic_A Dextran glucosidase; TI 53.2 5.2 0.00018 35.3 1.8 29 14-42 72-100 (543)
277 3zss_A Putative glucanohydrola 51.6 8.1 0.00028 35.4 2.8 30 14-43 314-343 (695)
278 3czg_A Sucrose hydrolase; (alp 51.2 7 0.00024 35.4 2.3 29 14-42 149-177 (644)
279 1m7x_A 1,4-alpha-glucan branch 50.3 7.5 0.00026 35.0 2.3 30 13-42 197-226 (617)
280 2bhu_A Maltooligosyltrehalose 48.7 8.3 0.00028 34.6 2.3 30 13-42 185-214 (602)
281 3vgf_A Malto-oligosyltrehalose 47.4 8.3 0.00028 34.2 2.1 30 13-42 160-189 (558)
282 3m07_A Putative alpha amylase; 47.3 10 0.00036 34.1 2.8 30 13-42 195-224 (618)
283 3ucq_A Amylosucrase; thermosta 46.0 9.3 0.00032 34.7 2.2 30 13-42 153-182 (655)
284 3k1d_A 1,4-alpha-glucan-branch 45.3 10 0.00035 34.9 2.4 30 13-42 305-334 (722)
285 1ijb_A VON willebrand factor; 43.7 36 0.0012 25.3 5.0 35 4-38 116-150 (202)
286 3k8k_A Alpha-amylase, SUSG; al 42.0 14 0.00047 33.7 2.7 30 13-42 99-128 (669)
287 3aml_A OS06G0726400 protein; s 41.5 12 0.00042 34.5 2.3 29 14-42 244-272 (755)
288 1iv8_A Maltooligosyl trehalose 40.6 19 0.00065 33.1 3.4 31 12-42 57-87 (720)
289 3aie_A Glucosyltransferase-SI; 39.5 16 0.00055 34.2 2.8 28 15-42 687-714 (844)
290 1ji1_A Alpha-amylase I; beta/a 38.5 12 0.00043 33.6 1.8 31 12-42 230-264 (637)
291 2wsk_A Glycogen debranching en 38.5 16 0.00054 33.2 2.5 24 19-42 240-263 (657)
292 3ttq_A Dextransucrase; (beta/a 37.5 18 0.00061 34.8 2.7 29 14-42 906-934 (1108)
293 1v77_A PH1877P, hypothetical p 36.1 16 0.00053 27.9 1.8 18 25-42 115-132 (212)
294 2e8y_A AMYX protein, pullulana 35.6 14 0.00048 33.9 1.7 24 19-42 314-337 (718)
295 3hje_A 704AA long hypothetical 34.8 23 0.00078 32.4 2.9 31 12-42 55-85 (704)
296 3klk_A Glucansucrase; native f 34.8 20 0.00068 34.4 2.6 29 14-42 739-767 (1039)
297 1bf2_A Isoamylase; hydrolase, 33.8 20 0.00068 33.1 2.4 23 20-42 272-294 (750)
298 2wan_A Pullulanase; hydrolase, 33.5 24 0.00082 33.4 2.9 26 17-42 526-553 (921)
299 2vr5_A Glycogen operon protein 32.8 18 0.00061 33.2 1.9 23 20-42 266-288 (718)
300 1gjw_A Maltodextrin glycosyltr 32.8 22 0.00074 32.1 2.4 25 18-42 179-203 (637)
301 2ya0_A Putative alkaline amylo 31.8 22 0.00074 32.6 2.3 23 20-42 254-276 (714)
302 3vup_A Beta-1,4-mannanase; TIM 30.0 35 0.0012 26.9 3.1 23 19-41 88-110 (351)
303 3pzt_A Endoglucanase; alpha/be 29.8 33 0.0011 27.9 2.9 22 20-41 104-125 (327)
304 1zco_A 2-dehydro-3-deoxyphosph 29.6 88 0.003 24.7 5.3 28 20-47 178-205 (262)
305 3nbm_A PTS system, lactose-spe 28.7 57 0.002 21.9 3.5 54 6-71 9-62 (108)
306 1shu_X Anthrax toxin receptor 28.2 59 0.002 23.2 3.9 36 4-39 104-139 (182)
307 1e2b_A Enzyme IIB-cellobiose; 26.2 45 0.0015 22.2 2.6 35 6-43 6-40 (106)
308 1x7f_A Outer surface protein; 26.1 51 0.0018 27.7 3.4 28 17-44 70-97 (385)
309 7a3h_A Endoglucanase; hydrolas 26.0 43 0.0015 26.8 2.9 24 20-43 79-102 (303)
310 3ibs_A Conserved hypothetical 25.9 82 0.0028 23.2 4.4 36 3-41 111-146 (218)
311 1pt6_A Integrin alpha-1; cell 25.8 73 0.0025 23.6 4.1 35 3-39 109-143 (213)
312 2b2x_A Integrin alpha-1; compu 25.8 73 0.0025 23.8 4.1 36 3-40 124-159 (223)
313 1tvn_A Cellulase, endoglucanas 25.5 45 0.0015 26.3 2.9 24 20-43 78-101 (293)
314 3bzy_B ESCU; auto cleavage pro 25.1 46 0.0016 21.3 2.3 18 24-41 30-47 (83)
315 1qnr_A Endo-1,4-B-D-mannanase; 25.0 35 0.0012 27.5 2.3 23 20-42 89-111 (344)
316 1n8f_A DAHP synthetase; (beta/ 24.8 92 0.0031 25.8 4.6 29 19-47 242-272 (350)
317 1bqc_A Protein (beta-mannanase 24.7 47 0.0016 26.3 2.9 22 20-41 64-85 (302)
318 1g01_A Endoglucanase; alpha/be 24.4 47 0.0016 27.3 2.9 24 20-43 89-112 (364)
319 4h6q_A Proline dehydrogenase; 23.5 50 0.0017 26.9 2.8 24 20-43 117-140 (312)
320 1egz_A Endoglucanase Z, EGZ, C 23.4 52 0.0018 25.9 2.9 23 19-41 75-97 (291)
321 1mf7_A Integrin alpha M; cell 23.0 1E+02 0.0035 22.3 4.4 37 4-41 107-143 (194)
322 4hty_A Cellulase; (alpha/beta) 22.9 53 0.0018 27.0 2.9 23 20-42 120-142 (359)
323 3faw_A Reticulocyte binding pr 22.8 47 0.0016 31.3 2.9 24 20-43 369-392 (877)
324 2whl_A Beta-mannanase, baman5; 22.8 45 0.0015 26.4 2.4 25 18-42 61-85 (294)
325 3jug_A Beta-mannanase; TIM-bar 21.5 49 0.0017 27.3 2.4 25 19-43 85-109 (345)
326 3n9k_A Glucan 1,3-beta-glucosi 21.4 42 0.0014 28.4 2.0 24 18-41 110-133 (399)
327 3t7y_A YOP proteins translocat 21.2 59 0.002 21.5 2.3 19 24-42 45-63 (97)
328 1h4p_A Glucan 1,3-beta-glucosi 20.9 61 0.0021 27.3 2.9 25 19-43 112-136 (408)
329 2osx_A Endoglycoceramidase II; 20.9 43 0.0015 28.8 2.1 23 20-42 104-126 (481)
330 2p0o_A Hypothetical protein DU 20.4 87 0.003 26.2 3.7 27 18-44 47-73 (372)
331 1vjz_A Endoglucanase; TM1752, 20.4 57 0.0019 26.4 2.6 26 18-43 74-99 (341)
332 2cks_A Endoglucanase E-5; carb 20.4 54 0.0018 26.1 2.4 23 19-41 78-100 (306)
333 3n2n_F Anthrax toxin receptor 20.1 63 0.0021 23.1 2.6 38 4-41 107-144 (185)
No 1
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=100.00 E-value=3.7e-39 Score=286.01 Aligned_cols=217 Identities=41% Similarity=0.802 Sum_probs=181.3
Q ss_pred CCCccEEEEEecCCCCcccccChhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCcccc
Q 048438 1 AGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATLDC 80 (239)
Q Consensus 1 ~g~~p~~vv~t~gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~ 80 (239)
+|..|++|++++++|.+|.++|+++|+++|++||+|+||||||+++.+..++++..+.+++.+|++++++|||+++|.|+
T Consensus 231 ~~~~~~~v~~~~~~t~~G~~~~l~~I~~la~~~~~~lhvD~A~~~~~~~~~~~~~~~~gi~~~Ds~~~~~hK~l~~p~g~ 310 (475)
T 3k40_A 231 EGLIPFYAVVTLGTTNSCAFDYLDECGPVGNKHNLWIHVDAAYAGSAFICPEYRHLMKGIESADSFNFNPHKWMLVNFDC 310 (475)
T ss_dssp TTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHTTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCCSSC
T ss_pred CCCccEEEEEEecCCCCcCcCCHHHHHHHHHHhCCeEEEeHHhHHHHHhCHhhHHHhcCcccCCEEEECchhccCCCCce
Confidence 36679999999999999999999999999999999999999999988877777766677767999999999999999999
Q ss_pred eEEEeeCcccccccccC---------CCCccCCCCceecCCCCCChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHh
Q 048438 81 CCLWATNPEYLKNKATE---------SKPVVDYKDWQITLSRSFRSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVS 151 (239)
Q Consensus 81 g~l~~~~~~~l~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~ 151 (239)
|+++++++..+...... .+...++.+++++++|++.++++|.+++.+|.+++++++++..++++++.+.|+
T Consensus 311 g~l~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~~l~l~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~ 390 (475)
T 3k40_A 311 SAMWLKDPSWVVNAFNVDPLYLKHDMQGSAPDYRHWQIPLGRRFRALKLWFVLRLYGVENLQAHIRRHCNFAKQFGDLCV 390 (475)
T ss_dssp EEEEESSGGGC---------------------------CCCGGGTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEeCHHHHHHHhcCCccccCCCcCCCCCCcccccccCCCcccHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999876554322110 011244567888999999999999999999999999999999999999999999
Q ss_pred CCCCeEEEcCCCeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhcCcEEEEEEEECCEeEEEEEec
Q 048438 152 GDKRFEVVFPCHFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINASGKAYMTNVVLGGIYAIRFATG 231 (239)
Q Consensus 152 ~~~g~~~~~~~~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~ 231 (239)
+++|++++.++.+++|+|++++. +..+..+.++|+++|.++++++.+.|..++|++++
T Consensus 391 ~~~g~~l~~~~~~~iv~f~~~~~----------------------~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~ 448 (475)
T 3k40_A 391 ADSRFELAAEINMGLVCFRLKGS----------------------NERNEALLKRINGRGHIHLVPAKIKDVYFLRMAIC 448 (475)
T ss_dssp HSTTEEESSCCBTTEEEEEESSC----------------------HHHHHHHHHHHHHHTSCBCEEEEETTEEEEEEECC
T ss_pred cCCCEEEecCCceEEEEEEeCCc----------------------hHHHHHHHHHHHhCCcEEEEeeEECCEEEEEEEeC
Confidence 99999999888999999999763 34567889999999999999999999999999999
Q ss_pred CCCCCcCC
Q 048438 232 ATLTEERH 239 (239)
Q Consensus 232 ~~~t~~~~ 239 (239)
+++|+++|
T Consensus 449 ~~~tt~~d 456 (475)
T 3k40_A 449 SRFTQSED 456 (475)
T ss_dssp CTTCCHHH
T ss_pred CCCCCHHH
Confidence 99987654
No 2
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=100.00 E-value=4.7e-39 Score=285.75 Aligned_cols=217 Identities=39% Similarity=0.768 Sum_probs=187.9
Q ss_pred CCCccEEEEEecCCCCcccccChhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCcccc
Q 048438 1 AGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATLDC 80 (239)
Q Consensus 1 ~g~~p~~vv~t~gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~ 80 (239)
+|..|++|++++|+|.+|.++||++|+++|++||+|+||||||+++++..++++....+++.+||+++++|||+++|.||
T Consensus 238 ~g~~~~~vv~~~~~t~~G~id~l~~I~~la~~~~~~lhvDaA~g~~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~g~ 317 (481)
T 4e1o_A 238 RGLVPVFVCATLGTTGVCAFDCLSELGPICAREGLWLHIDAAYAGTAFLCPEFRGFLKGIEYADSFTFNPSKWMMVHFDC 317 (481)
T ss_dssp TTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCCSSC
T ss_pred CCCCcEEEEEecCCCCCcCcCCHHHHHHHHHHcCCeEEeehhhHHHHHhChhhHHHhcCcccCCEEEEChHHhcCCCCce
Confidence 36779999999999999999999999999999999999999999998878777776777777899999999999999999
Q ss_pred eEEEeeCcccccccccC---------CCCccCCCCceecCCCCCChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHh
Q 048438 81 CCLWATNPEYLKNKATE---------SKPVVDYKDWQITLSRSFRSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVS 151 (239)
Q Consensus 81 g~l~~~~~~~l~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~ 151 (239)
|+++++++..+...... .....++.+|+++.+|++.++++|.+++.+|.+++++++++..++++++.+.|+
T Consensus 318 g~l~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~r~~~~l~~~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~ 397 (481)
T 4e1o_A 318 TGFWVKDKYKLQQTFSVNPIYLRHANSGVATDFMHWQIPLSRRFRSVKLWFVIRSFGVKNLQAHVRHGTEMAKYFESLVR 397 (481)
T ss_dssp EEEEESBHHHHHTTTCCCCGGGCCTTTTTSCCGGGGSSSSCCCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEeCHHHHHHHhcCCchhccCcccCCCCCcccccccCCCCccHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999876443221100 012234556788899999999999999999999999999999999999999999
Q ss_pred CCCCeEEEcCCCeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhcCcEEEEEEEECCEeEEEEEec
Q 048438 152 GDKRFEVVFPCHFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINASGKAYMTNVVLGGIYAIRFATG 231 (239)
Q Consensus 152 ~~~g~~~~~~~~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~ 231 (239)
+++|++++.++.+++|+|++++. +..+..+.++|.++|.++++++.+.|..++|++++
T Consensus 398 ~~~g~~~~~~~~~~~v~f~~~~~----------------------~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~ 455 (481)
T 4e1o_A 398 NDPSFEIPAKRHLGLVVFRLKGP----------------------NSLTENVLKEIAKAGRLFLIPATIQDKLIIRFTVT 455 (481)
T ss_dssp TCTTEECCSCCCSSEEEEEESSC----------------------HHHHHHHHHHHHHHCSSBCEEEEETTEEEEEEECC
T ss_pred cCCCeEEecCCceeEEEEEeCCc----------------------hHHHHHHHHHHHhCCeEEEEeeEECCEEEEEEEeC
Confidence 99999999888999999999763 35567889999999998889999999999999999
Q ss_pred CCCCCcCC
Q 048438 232 ATLTEERH 239 (239)
Q Consensus 232 ~~~t~~~~ 239 (239)
+++|+++|
T Consensus 456 ~~~tt~~d 463 (481)
T 4e1o_A 456 SQFTTRDD 463 (481)
T ss_dssp CTTCCHHH
T ss_pred CCCCCHHH
Confidence 99987654
No 3
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=100.00 E-value=2.4e-36 Score=270.15 Aligned_cols=232 Identities=22% Similarity=0.400 Sum_probs=189.3
Q ss_pred CCCccEEEEEecCCCCcccccChhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCcccc
Q 048438 1 AGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATLDC 80 (239)
Q Consensus 1 ~g~~p~~vv~t~gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~ 80 (239)
+|..|++|++++++|.+|.++||++|+++|++||+|+|||+||+++.+..++++..+.+++++|++++++|||+++|.||
T Consensus 245 ~g~~~~~vv~~~~~~~~G~vd~l~~I~~ia~~~~~~lhvD~a~~~~~~~~~~~~~~~~g~~~aDsv~~~~hK~l~~p~g~ 324 (511)
T 3vp6_A 245 KGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVLLQC 324 (511)
T ss_dssp TTCEEEEEEEEBSCSSSCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCC
T ss_pred cCCCcEEEEEecCCCCCcccccHHHHHHHHHHcCCEEEEEccchhhHhhChhhhhhccCCccCCEEEECcccccCCCcCe
Confidence 36779999999999999999999999999999999999999999999988887777777777999999999999999999
Q ss_pred eEEEeeCcccccccc-----------cCCCCccCCCCceecCCCCCChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH
Q 048438 81 CCLWATNPEYLKNKA-----------TESKPVVDYKDWQITLSRSFRSLKLWFVIRNYGMENLRHFLRSHVNMARLFERL 149 (239)
Q Consensus 81 g~l~~~~~~~l~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~ 149 (239)
|+++++++..+.... .......++..++++++|++.++++|.+++.+|.+++++++++..++++++.+.
T Consensus 325 g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~r~~~al~~~~al~~~g~~gl~~~~~~~~~~a~~l~~~ 404 (511)
T 3vp6_A 325 SAILVKEKGILQGCNQMHASYLFQQDKHYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKGTVGFENQINKCLELAEYLYAK 404 (511)
T ss_dssp EEEEESSTTHHHHHHCCCCTTTCCSSCSSCGGGCCGGGSSCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEeCHHHHHHHhccCCccccCcccccccccCccCCCCCCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 999998764332211 001112334567888999999999999999999999999999999999999999
Q ss_pred HhCCCCeEEEc--CCCeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhcCcEEEEEEEECCE-eEE
Q 048438 150 VSGDKRFEVVF--PCHFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINASGKAYMTNVVLGGI-YAI 226 (239)
Q Consensus 150 l~~~~g~~~~~--~~~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~-~~l 226 (239)
|+++||++++. ++..++|+|++.+...+. ..+...+....+..+..+.++|.++|.+++.++...+. .++
T Consensus 405 L~~~pg~~l~~~~~p~~~~v~f~~~p~~~~~-------~~~~~~~~~~l~~~~~~l~~~L~~~G~~~~~~~~~~~~~~~l 477 (511)
T 3vp6_A 405 IKNREEFEMVFNGEPEHTNVCFWYIPQSLRG-------VPDSPQRREKLHKVAPKIKALMMESGTTMVGYQPQGDKANFF 477 (511)
T ss_dssp HHSCTTEEESSSSCCSSSCEEEEECCGGGSS-------CCCCHHHHHHHHHHHHHHHHHHHHHTSCEEEEEEETTEEEEE
T ss_pred HhcCCCEEEEecCCCCeEEEEEEEeCccccc-------cccchhHHHHHHHHHHHHHHHHHhcCCEEEEEEEeCCceEEE
Confidence 99999999998 588999999997643210 00011122345667778999999999988887666654 689
Q ss_pred EEEecCCCCCcCC
Q 048438 227 RFATGATLTEERH 239 (239)
Q Consensus 227 R~~~~~~~t~~~~ 239 (239)
|++++++.|+++|
T Consensus 478 Ri~~~~~~~t~~d 490 (511)
T 3vp6_A 478 RMVISNPAATQSD 490 (511)
T ss_dssp EECCCCTTCCHHH
T ss_pred EEEecCCCCCHHH
Confidence 9999999988764
No 4
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=100.00 E-value=2.4e-35 Score=262.04 Aligned_cols=216 Identities=43% Similarity=0.792 Sum_probs=181.5
Q ss_pred CCCccEEEEEecCCCCcccccChhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCcccc
Q 048438 1 AGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATLDC 80 (239)
Q Consensus 1 ~g~~p~~vv~t~gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~ 80 (239)
+|..|++|++++++|.+|.++|+++|+++|++||+|+|||+||+++.+..++++..+.+++++|++++++|||+++|.+|
T Consensus 232 ~g~~p~~vv~~~~~n~tG~~~~l~~I~~la~~~~~~lhvD~a~g~~~~~~~~~~~~~~g~~~adsi~~~~hK~~~~p~~~ 311 (486)
T 1js3_A 232 AGLIPFFVVATLGTTSCCSFDNLLEVGPICHEEDIWLHVDAAYAGSAFICPEFRHLLNGVEFADSFNFNPHKWLLVNFDC 311 (486)
T ss_dssp TTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHTTCEEEEECTTGGGGGGSTTTGGGGTTGGGCSEEEECHHHHSSCCSSC
T ss_pred CCCCceEEEEeCCCCCCCCCCCHHHHHHHHHHcCCEEEEehhhHHHHHHCHHHHHHhcCccccCeeEEchhhhcCCCcce
Confidence 36789999999999999999999999999999999999999999998877766665566667999999999999999999
Q ss_pred eEEEeeCcccccccc---cC---C-----CCccCCCCceecCCCCCChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH
Q 048438 81 CCLWATNPEYLKNKA---TE---S-----KPVVDYKDWQITLSRSFRSLKLWFVIRNYGMENLRHFLRSHVNMARLFERL 149 (239)
Q Consensus 81 g~l~~~~~~~l~~~~---~~---~-----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~ 149 (239)
|+++++++..+.... .. . ....++..++++.+|++.++++|.+++.+|.+++++++++..++++++.+.
T Consensus 312 G~l~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~~~~~~~al~~~g~~g~~~~~~~~~~~a~~l~~~ 391 (486)
T 1js3_A 312 SAMWVKRRTDLTGAFKLDPVYLKHSHQGSGLITDYRHWQLPLGRRFRSLKMWFVFRMYGVKGLQAYIRKHVQLSHEFEAF 391 (486)
T ss_dssp EEEEESCHHHHHGGGC------------CCSCCCGGGSSSCSCCCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEeCHHHHHHHhcCCchhhCCCcccccCCCCccccCCCCCCchhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 999998764321111 00 0 012333456778899999999999999999999999999999999999999
Q ss_pred HhCCCCeEEEcCCCeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhcCcEEEEEEEECCEeEEEEE
Q 048438 150 VSGDKRFEVVFPCHFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINASGKAYMTNVVLGGIYAIRFA 229 (239)
Q Consensus 150 l~~~~g~~~~~~~~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~ 229 (239)
|+++++++++.++..++++|++++. +.++..+.++|.++|.++++++.+.+..++|++
T Consensus 392 L~~~~~~~~~~~~~~~~v~f~~~~~----------------------~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~ 449 (486)
T 1js3_A 392 VLQDPRFEVCAEVTLGLVCFRLKGS----------------------DGLNEALLERINSARKIHLVPCRLRGQFVLRFA 449 (486)
T ss_dssp HHHCTTEEECSCCCSSEEEEEESSC----------------------HHHHHHHHHHHHHHTSCBCEEEEETTEEEEEEE
T ss_pred HhcCCCeEEeCCCceeEEEEEecCh----------------------HHHHHHHHHHHHhcCCEEEEEEEECCEEEEEEE
Confidence 9999999998888899999998752 345568888898889888888888899999999
Q ss_pred ecCCCCCcC
Q 048438 230 TGATLTEER 238 (239)
Q Consensus 230 ~~~~~t~~~ 238 (239)
++++.++++
T Consensus 450 ~~~~~~t~~ 458 (486)
T 1js3_A 450 ICSRKVESG 458 (486)
T ss_dssp CCCTTCCHH
T ss_pred eCCCCCCHH
Confidence 999887654
No 5
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=100.00 E-value=1.6e-34 Score=257.57 Aligned_cols=219 Identities=25% Similarity=0.430 Sum_probs=177.8
Q ss_pred CCccEEEEEecCCCCcccccChhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCcccce
Q 048438 2 GLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATLDCC 81 (239)
Q Consensus 2 g~~p~~vv~t~gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g 81 (239)
|..|++|++++++|.+|.++|+++|+++|++||+|+|||+||+++..+.+ ++..+.+++.+|++++++|||+++|.++|
T Consensus 256 ~~~~~~vv~~~~~~~tG~~~~l~~I~~l~~~~~~~l~vD~a~~~~~~~~~-~~~~~~gi~~~D~i~~s~hK~l~~p~~~G 334 (497)
T 2qma_A 256 GLIPFAIVGTAGTTDHGAIDDLDFIADMAVKHDMWMHVDGAYGGALILSS-HKSRLKGVERAHSISVDFHKLFYQTISCG 334 (497)
T ss_dssp TCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGST-TGGGGTTGGGCSEEEEETTTTTCCCSSCE
T ss_pred CCcceEEEEcCCCCCCCCCCCHHHHHHHHHHcCCEEEEehhhhHHHHhCc-chHhhcCcccCCEEEEcchhccCCCcceE
Confidence 55688999999999999999999999999999999999999999988776 55555666569999999999999999999
Q ss_pred EEEeeCcccccccccCCC-------CccCCCCceecCCCCCChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 048438 82 CLWATNPEYLKNKATESK-------PVVDYKDWQITLSRSFRSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSGDK 154 (239)
Q Consensus 82 ~l~~~~~~~l~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~ 154 (239)
+++++++..+........ ...++..++++++|++.++++|.+++.+|.+++++++++..++++++.+.|++++
T Consensus 335 ~l~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~r~~~al~~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~ 414 (497)
T 2qma_A 335 ALLVNDKSNFKFLLHHADYLNREHDELPNLVDKSIATTKRFDALKVFMTMQNVGPKALGDMYDHLLAQTLEVADMIRTND 414 (497)
T ss_dssp EEEESCGGGGGGGCC--------------------CCSCCCTHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHTCT
T ss_pred EEEEeCHHHHHHhcCCchhcCCccccCCCccccCCCCCCchhHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 999987654432211100 0123345667788999999999999999999999999999999999999999999
Q ss_pred CeEEEcCCCeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhcCcEEEEEEEECCEeEEEEEecCCC
Q 048438 155 RFEVVFPCHFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINASGKAYMTNVVLGGIYAIRFATGATL 234 (239)
Q Consensus 155 g~~~~~~~~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~ 234 (239)
+++++.+++.++|+|++.+... ..++++..+.+.|.++|..+.+++.+.|..++|++++++.
T Consensus 415 ~~~~~~~~~~~~v~f~~~~~~~------------------~~~~l~~~l~~~l~~~G~~~~~~~~~~g~~~lRis~~~~~ 476 (497)
T 2qma_A 415 QFELLAEPSLSTVLFRATHETA------------------DLDELNKALRLEALTRGIAVLGETIVDGKTALKFTILNPC 476 (497)
T ss_dssp TEEECSCCSSSEEEEEECCSSS------------------CHHHHHHHHHHHHHHHTSCBCEEEEETTEEEEEEECCCTT
T ss_pred CeEEEcCCCceEEEEEEcCCcc------------------CHHHHHHHHHHHHHhCCCEEEEeeEECCEEEEEEEecCCC
Confidence 9999888889999999976321 1245667888889999999888888889999999998888
Q ss_pred CCcCC
Q 048438 235 TEERH 239 (239)
Q Consensus 235 t~~~~ 239 (239)
++++|
T Consensus 477 ~t~ed 481 (497)
T 2qma_A 477 LTTSD 481 (497)
T ss_dssp CCHHH
T ss_pred CCHHH
Confidence 77654
No 6
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=100.00 E-value=4.6e-34 Score=254.90 Aligned_cols=231 Identities=22% Similarity=0.404 Sum_probs=181.9
Q ss_pred CCccEEEEEecCCCCcccccChhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCcccce
Q 048438 2 GLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATLDCC 81 (239)
Q Consensus 2 g~~p~~vv~t~gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g 81 (239)
|..|.+|++++++|.+|.++|+++|+++|++||+|+|||+||+++.+..++++..+.+++++|++++++|||+++|.+||
T Consensus 243 g~~~~~V~~~~~~~~tG~i~~l~~I~~la~~~g~~lhvD~a~~~~~~~~~~~~~~~~g~~~~D~i~~~~hK~~~~p~~~g 322 (504)
T 2okj_A 243 GYVPFYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVLLQCS 322 (504)
T ss_dssp TCEEEEEEECBSCSSSCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCE
T ss_pred CCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCCEEEEehhhhhHHHhCHhhHhhcCCcccCCEEEECchhhcCCCcceE
Confidence 66799999999999999999999999999999999999999999988776665556666579999999999999999999
Q ss_pred EEEeeCccccccc---ccC---C-----CCccCCCCceecCCCCCChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHH
Q 048438 82 CLWATNPEYLKNK---ATE---S-----KPVVDYKDWQITLSRSFRSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLV 150 (239)
Q Consensus 82 ~l~~~~~~~l~~~---~~~---~-----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l 150 (239)
+++++++..+... ... . ...+++..++++.+||+.++++|++++.+|.+++++++++..++++++.+.|
T Consensus 323 ~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~rr~~~l~~~a~l~~lg~~g~~~~~~~~~~~a~~l~~~L 402 (504)
T 2okj_A 323 AILVKEKGILQGCNQMCAGYLFQPDKQYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKGTVGFENQINKCLELAEYLYAKI 402 (504)
T ss_dssp EEEESSTTHHHHHHCCCCSSSCCSCCSSCGGGCCGGGSSCSSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEECHHHHHHHhcCCCccccCCcccccCcCCcccCCCCCCCCccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999875443211 000 0 0113344567788999999999999999999999999999999999999999
Q ss_pred hCCCCeEEEc--CCCeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhcCcEEEEEEEECCE-eEEE
Q 048438 151 SGDKRFEVVF--PCHFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINASGKAYMTNVVLGGI-YAIR 227 (239)
Q Consensus 151 ~~~~g~~~~~--~~~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~-~~lR 227 (239)
+++++++++. ++..++++|++.+...... .....-.+..++.+..+.++|.++|.+++.++.+.|. .++|
T Consensus 403 ~~~~~~~~~~~~~p~~~~v~f~~~~~~~~~~-------~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~~~~~~~~~~lR 475 (504)
T 2okj_A 403 KNREEFEMVFNGEPEHTNVCFWYIPQSLRGV-------PDSPQRREKLHKVAPKIKALMMESGTTMVGYQPQGDKANFFR 475 (504)
T ss_dssp TTCTTEEESSSSCCSSSCEEEEECCGGGSSC-------CCCHHHHHHHTTHHHHHHHHHHHHTSCEEEEEEETTEEEEEE
T ss_pred hcCCCEEEEecCCCCeEEEEEEEeCcccccc-------ccchhhHHHHHHHHHHHHHHHHhCCcEEEEeeEECCceEEEE
Confidence 9999999987 5788899999865310000 0000011223345678889999999988887777775 7999
Q ss_pred EEecCCCCCcCC
Q 048438 228 FATGATLTEERH 239 (239)
Q Consensus 228 ~~~~~~~t~~~~ 239 (239)
++++++.|+++|
T Consensus 476 is~~~~~~t~ed 487 (504)
T 2okj_A 476 MVISNPAATQSD 487 (504)
T ss_dssp ECCCCTTCCHHH
T ss_pred EEeCCCCCCHHH
Confidence 999988887764
No 7
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=100.00 E-value=1.4e-33 Score=252.43 Aligned_cols=231 Identities=28% Similarity=0.448 Sum_probs=181.7
Q ss_pred CCccEEEEEecCCCCcccccChhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCcccce
Q 048438 2 GLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATLDCC 81 (239)
Q Consensus 2 g~~p~~vv~t~gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g 81 (239)
|..|.+|++++++|.+|.++|+++|+++|++||+|+|||+||+++.++.++++..+.+++++|++++++|||+++|.|||
T Consensus 257 g~~~~~Vv~~~~~n~tG~i~~l~~I~~la~~~g~~l~vD~a~~~~~~~~~~~~~~~~g~~~aD~v~~s~hK~l~~p~g~G 336 (515)
T 2jis_A 257 GAVPFLVSATSGTTVLGAFDPLEAIADVCQRHGLWLHVDAAWGGSVLLSQTHRHLLDGIQRADSVAWNPHKLLAAGLQCS 336 (515)
T ss_dssp TCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCE
T ss_pred CCCcEEEEEeCCCCCCCCccCHHHHHHHHHHcCCeEEEehhhhhHHHhChhhHhhcCCCccCCEEEECcccccCCCCCee
Confidence 56799999999999999999999999999999999999999999999887766656676679999999999999999999
Q ss_pred EEEeeCc-ccccccc---cC---C-----CCccCCCCceecCCCCCChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH
Q 048438 82 CLWATNP-EYLKNKA---TE---S-----KPVVDYKDWQITLSRSFRSLKLWFVIRNYGMENLRHFLRSHVNMARLFERL 149 (239)
Q Consensus 82 ~l~~~~~-~~l~~~~---~~---~-----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~ 149 (239)
+++++++ .++.... .. . ...+++..++++.+||++++++|++++.+|.+++++++++..++++++.+.
T Consensus 337 ~l~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~al~~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~ 416 (515)
T 2jis_A 337 ALLLQDTSNLLKRCHGSQASYLFQQDKFYDVALDTGDKVVQCGRRVDCLKLWLMWKAQGDQGLERRIDQAFVLARYLVEE 416 (515)
T ss_dssp EEEESCCSCHHHHHHCC---------CCSCGGGCCGGGCSCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeChHHHHHHHhcCCchhccCCcccccccCCCCCCCCCCCCcccHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999876 4433210 00 0 011234446678899999999999999999999999999999999999999
Q ss_pred HhCCCCeEEEcCCCeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhcCcEEEEEEEECC-EeEEEE
Q 048438 150 VSGDKRFEVVFPCHFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINASGKAYMTNVVLGG-IYAIRF 228 (239)
Q Consensus 150 l~~~~g~~~~~~~~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g-~~~lR~ 228 (239)
|+++++++++.++..++|+|++.+..... . .+...-.+..++++..+.+.|.++|.++++++.+.+ ..++|+
T Consensus 417 L~~~~g~~~~~~~~~~~v~f~~~p~~~~~-----~--~~~~~~~~~l~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~lRi 489 (515)
T 2jis_A 417 MKKREGFELVMEPEFVNVCFWFVPPSLRG-----K--QESPDYHERLSKVAPVLKERMVKEGSMMIGYQPHGTRGNFFRV 489 (515)
T ss_dssp HHTSTTEEESSCCSSSEEEEEECCGGGTT-----C--TTSTTHHHHHHTHHHHHHHHHHHHTSCEEEEEEETTEEEEEEE
T ss_pred HhcCCCEEEeCCCCeeEEEEEEeCccccc-----c--ccchhHHHHHHHHHHHHHHHHHhcCCEEEEEEEECCceEEEEE
Confidence 99999999998888889999985421100 0 000011233445566788889999998887777666 479999
Q ss_pred EecCCCCCcCC
Q 048438 229 ATGATLTEERH 239 (239)
Q Consensus 229 ~~~~~~t~~~~ 239 (239)
+++++.++++|
T Consensus 490 s~~~~~~t~ed 500 (515)
T 2jis_A 490 VVANSALTCAD 500 (515)
T ss_dssp ECCCTTCCHHH
T ss_pred EeCCCCCCHHH
Confidence 99778777653
No 8
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=99.96 E-value=5.7e-28 Score=212.72 Aligned_cols=213 Identities=18% Similarity=0.253 Sum_probs=157.8
Q ss_pred ccEEEEEecCCCCcccccChhHHHHHHHHh------CCEEEEecccccccccC--cccccccCCCCCcceEEEcCcccCC
Q 048438 4 IPLFLCATIGTTAITAVDPLKPLCDVAKQF------GIWVHVDAAYAGSACIF--PEFRHFIDGVEGADSFSLNAHKWFF 75 (239)
Q Consensus 4 ~p~~vv~t~gtt~~G~i~pl~~i~~i~~~~------gi~lhvD~A~~~~~~~~--~~~~~~~~~~~~~Ds~~~~~hK~l~ 75 (239)
.|.+|++++++|.+|.++|+++|+++|+++ |+|+|||+||+++..++ +..+..+ .+.++|++++++|||++
T Consensus 187 ~t~~v~~~~~~n~tG~~~~l~~I~~ia~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~-~~~~~d~~~~~~hK~~~ 265 (452)
T 2dgk_A 187 NTIGVVPTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDF-RLPRVKSISASGHKFGL 265 (452)
T ss_dssp TEEEEECBBSCTTTCBBCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCST-TSTTEEEEEEETTTTTC
T ss_pred CCEEEEEEcCCcCCcccCCHHHHHHHHHHHhhccCCCCcEEEEcccHHHHHHhhCccchhhc-CCCCCcEEEECcccccC
Confidence 478999999999999999999999999996 99999999999876532 2211112 24569999999999999
Q ss_pred CcccceEEEeeCcccccccccCCCCccC--CCCceecCCCCC-ChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhC
Q 048438 76 ATLDCCCLWATNPEYLKNKATESKPVVD--YKDWQITLSRSF-RSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSG 152 (239)
Q Consensus 76 ~P~g~g~l~~~~~~~l~~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~ 152 (239)
+|.++|+++++++..+.........+.. ...+++.++|++ .++++|.+++.+|.+++++++++..++++++.+.|++
T Consensus 266 ~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~aal~~lg~~g~~~~~~~~~~~a~~l~~~L~~ 345 (452)
T 2dgk_A 266 APLGCGWVIWRDEEALPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQVAAYLADEIAK 345 (452)
T ss_dssp CCSSCEEEEESSGGGSCGGGCEEECCTTCCEEECCSCCSCBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCeEEEEEcCHHHHHHHhccCccccCCCCCCcccCCCChhHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999776444221100001110 112334556666 6788999999999999999999999999999999999
Q ss_pred CCCeEEEcC----CCeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHH-HHHHHHHHhcCcE---EEEEEEECCEe
Q 048438 153 DKRFEVVFP----CHFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFN-RELLESINASGKA---YMTNVVLGGIY 224 (239)
Q Consensus 153 ~~g~~~~~~----~~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~l~~~g~~---~~~~~~~~g~~ 224 (239)
+++++++.+ +..++++|++++... +.++ ..+.++|.++|.. +..+..+.+..
T Consensus 346 ~~~~~~~~~~~~~~~~~~v~f~~~~~~~--------------------~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~ 405 (452)
T 2dgk_A 346 LGPYEFICTGRPDEGIPAVCFKLKDGED--------------------PGYTLYDLSERLRLRGWQVPAFTLGGEATDIV 405 (452)
T ss_dssp TSSEEEEEECCTTTBSSEEEEEECTTCC--------------------CSCCHHHHHHHHHHTTCBCCEEECSTTCTTCE
T ss_pred CCCeEEecCCCCCCCeEEEEEEecCccc--------------------ccCCHHHHHHHHHhcCCeeeeeeCCcccCCeE
Confidence 988999865 578999999975310 0011 3677778878874 33223344677
Q ss_pred EEEEEecCCCCCc
Q 048438 225 AIRFATGATLTEE 237 (239)
Q Consensus 225 ~lR~~~~~~~t~~ 237 (239)
++|+++++++|.+
T Consensus 406 ~lRis~~~~~t~e 418 (452)
T 2dgk_A 406 VMRIMCRRGFEMD 418 (452)
T ss_dssp EEEEECCTTCCHH
T ss_pred EEEEEecCCCCHH
Confidence 9999999998854
No 9
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=99.95 E-value=1.8e-27 Score=212.33 Aligned_cols=212 Identities=16% Similarity=0.199 Sum_probs=160.0
Q ss_pred ccEEEEEecCCCCcccccChhHHHHHHHHh------CCEEEEeccccccccc--CcccccccCCCCCcceEEEcCcccCC
Q 048438 4 IPLFLCATIGTTAITAVDPLKPLCDVAKQF------GIWVHVDAAYAGSACI--FPEFRHFIDGVEGADSFSLNAHKWFF 75 (239)
Q Consensus 4 ~p~~vv~t~gtt~~G~i~pl~~i~~i~~~~------gi~lhvD~A~~~~~~~--~~~~~~~~~~~~~~Ds~~~~~hK~l~ 75 (239)
.|.+|++++++|.+|.++|+++|+++|+++ |+|+|||+||+++..+ .+..+..+. +.++|++++++|||++
T Consensus 202 ~t~~v~~~~~~n~tG~~~~l~~I~~ia~~~~~~~~~~~~l~VD~A~~~~~~p~~~~~~~~~~~-~~~~D~v~~s~hK~l~ 280 (502)
T 3hbx_A 202 NTICVAAILGSTLNGEFEDVKLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFR-LPLVKSINVSGHKYGL 280 (502)
T ss_dssp TEEEEEEEBSCTTTCCBCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTT-STTEEEEEEETTTTTC
T ss_pred CCEEEEEecCCCCCCcccCHHHHHHHHHHhhhccCCCCeEEEECCccchhhhhhCcccccccC-CCCceEEEECcccccC
Confidence 478999999999999999999999999999 9999999999977643 232222222 3569999999999999
Q ss_pred CcccceEEEeeCcccccccccCCCCccC--CCCceecCCCCC-ChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhC
Q 048438 76 ATLDCCCLWATNPEYLKNKATESKPVVD--YKDWQITLSRSF-RSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSG 152 (239)
Q Consensus 76 ~P~g~g~l~~~~~~~l~~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~ 152 (239)
+|.|+|+++++++..+.........+.. ...+.+..+|+. .++++|.+++.++.+++++++++..++++++.+.|++
T Consensus 281 ~p~g~G~~~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~sr~~~~~~a~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~ 360 (502)
T 3hbx_A 281 VYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGHEGYRNVMENCRENMIVLREGLEK 360 (502)
T ss_dssp CCSSCEEEEESSGGGSCGGGCEEECSSSSCEEECCSCCSCBSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCeEEEEEeCHHHhhHHhccCcccccCCCCCccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999876554322110000110 012333445554 6788999999999999999999999999999999999
Q ss_pred CCCeEEEcC-CCeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhcCcEEEEEEE---ECCEeEEEE
Q 048438 153 DKRFEVVFP-CHFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINASGKAYMTNVV---LGGIYAIRF 228 (239)
Q Consensus 153 ~~g~~~~~~-~~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~---~~g~~~lR~ 228 (239)
+++++++.+ +..++|+|++++... . + ...+.++|.++|.++..... ..+..++|+
T Consensus 361 ~~~~~~~~~~~~~~~v~f~~~~~~~--------------~-----~--~~~l~~~L~~~Gi~v~~~~~p~~~~~~~~lRi 419 (502)
T 3hbx_A 361 TERFNIVSKDEGVPLVAFSLKDSSC--------------H-----T--EFEISDMLRRYGWIVPAYTMPPNAQHITVLRV 419 (502)
T ss_dssp TTCEEECSCSSSSSEEEEEESSCSS--------------C-----C--HHHHHHHHHTTTCBCCEEECCTTCTTCEEEEE
T ss_pred CCCEEEEeCCCCceEEEEEecCCCc--------------C-----C--HHHHHHHHHhCCcEEeeccCCcccCCceEEEE
Confidence 988999887 789999999976310 0 0 12677888888887543332 346789999
Q ss_pred EecCCCCCc
Q 048438 229 ATGATLTEE 237 (239)
Q Consensus 229 ~~~~~~t~~ 237 (239)
+++..+|.+
T Consensus 420 sv~~~~t~e 428 (502)
T 3hbx_A 420 VIREDFSRT 428 (502)
T ss_dssp ECCTTCCHH
T ss_pred EeCCCCCHH
Confidence 999877764
No 10
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=99.88 E-value=1e-21 Score=174.59 Aligned_cols=205 Identities=17% Similarity=0.210 Sum_probs=145.8
Q ss_pred ccEEEEEecCCCCcccccChhHHHHHHHHhCCEEEEecccccccccCcc------cccccCCCCCcceEEEcCcccCCCc
Q 048438 4 IPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIFPE------FRHFIDGVEGADSFSLNAHKWFFAT 77 (239)
Q Consensus 4 ~p~~vv~t~gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~------~~~~~~~~~~~Ds~~~~~hK~l~~P 77 (239)
.|.+|+++.++|.+|.++|+++|+++|++||+|+|||+||+++..++.+ .........++|++++++|||+++|
T Consensus 206 ~~~~v~~~~p~nptG~~~~l~~i~~la~~~g~~livD~a~~~~~~~f~~~~~~~~~~~~~~~~~g~d~~~~s~~K~l~~~ 285 (497)
T 3mc6_A 206 NTVLLVGSAPNFPHGIADDIEGLGKIAQKYKLPLHVDSCLGSFIVSFMEKAGYKNLPLLDFRVPGVTSISCDTHKYGFAP 285 (497)
T ss_dssp SEEEEEEETTCTTTCCCCSCTTTTTHHHHTTCCEEEETTTTHHHHGGGTTTTCCSCCCCSTTSTTCCEEEEETTTTTCCC
T ss_pred CCEEEEEECCCCCCCcCCCHHHHHHHHHHhCCEEEEECcchhhhhhhhhhhcccCCccccccCCCCcEEEECchhhcCCC
Confidence 4789999999999999999999999999999999999999977654211 0000111235999999999999999
Q ss_pred ccceEEEeeCcccccccccCCCCcc--CCCCceecCCCCCC--hHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhC-
Q 048438 78 LDCCCLWATNPEYLKNKATESKPVV--DYKDWQITLSRSFR--SLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSG- 152 (239)
Q Consensus 78 ~g~g~l~~~~~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~--~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~- 152 (239)
.++|+++++++............+. .+....+ .+++.. .+++|.+++.++.++++++.++..++++++.+.|++
T Consensus 286 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~ 364 (497)
T 3mc6_A 286 KGSSVIMYRNSDLRMHQYYVNPAWTGGLYGSPTL-AGSRPGAIVVGCWATMVNMGENGYIESCQEIVGAAMKFKKYIQEN 364 (497)
T ss_dssp SSCEEEECSSHHHHTTTSCCBTTCTTSCBCCSSS-CSSCBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred CCceeEEecCHHHHhhhhcccccccCCCcCCcCc-ccCCcchhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999876533221110000000 0111122 234433 456888999999999999999999999999999999
Q ss_pred CCCeEEEcCCCeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhcCcEEEEEEEECCEeEEEEEecC
Q 048438 153 DKRFEVVFPCHFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINASGKAYMTNVVLGGIYAIRFATGA 232 (239)
Q Consensus 153 ~~g~~~~~~~~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~ 232 (239)
++|++++.++..++++|+.++.. ...+.+.|.++|..+.. ......+|++++
T Consensus 365 ~~g~~~~~~~~~~~v~~~~~~~~------------------------~~~l~~~L~~~Gi~v~~---~~~~~~~ri~~~- 416 (497)
T 3mc6_A 365 IPDLDIMGNPRYSVISFSSKTLN------------------------IHELSDRLSKKGWHFNA---LQKPVALHMAFT- 416 (497)
T ss_dssp CTTCEECSCCCSSEEEEECTTTT------------------------HHHHHHHHHTTTCBCEE---CCSSCCEEEECC-
T ss_pred CCCEEEecCCCeeEEEEeCCCCC------------------------HHHHHHHHHhCCEEEec---CCCCCeEEEEEe-
Confidence 79999998888999999865421 12567778888865432 122346799987
Q ss_pred CCCCc
Q 048438 233 TLTEE 237 (239)
Q Consensus 233 ~~t~~ 237 (239)
..|.+
T Consensus 417 ~~t~e 421 (497)
T 3mc6_A 417 RLSAH 421 (497)
T ss_dssp TTTTC
T ss_pred CCCHH
Confidence 44443
No 11
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=99.87 E-value=1.8e-21 Score=173.87 Aligned_cols=204 Identities=20% Similarity=0.196 Sum_probs=146.2
Q ss_pred ccEEEEEecCCCCcccccChhHHHHHHHHhCCEEEEecccccccccC--------cccccccCCCCCcceEEEcCcccCC
Q 048438 4 IPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIF--------PEFRHFIDGVEGADSFSLNAHKWFF 75 (239)
Q Consensus 4 ~p~~vv~t~gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~--------~~~~~~~~~~~~~Ds~~~~~hK~l~ 75 (239)
.+.+|+++..+|.+|.++|+++|+++|++||+|+|||+||+++.++. +.+. ....++|++++++|||++
T Consensus 239 ~~~~v~~~~~~nptG~~~~l~~i~~la~~~~i~livDea~~~~~~~~~~~~g~~~~~~~---~~~~g~d~~~~s~~K~l~ 315 (514)
T 3mad_A 239 NTVVVAGSAPGYPHGVVDPIPEIAALAAEHGIGCHVDACLGGFILPWAERLGYPVPPFD---FRLEGVTSVSADTHKYGY 315 (514)
T ss_dssp TEEEEEEETTCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTTTTHHHHHHTTCCCCCCS---TTSTTCCEEEECTTTTTC
T ss_pred CCEEEEEeCCCCCCccccCHHHHHHHHHHhCCeEEEecccccccchhHHhcCCCCCccc---ccCCCCcEEEECchhccC
Confidence 46788999999999999999999999999999999999999876531 1111 122359999999999999
Q ss_pred CcccceEEEeeCcccccccccCCCCcc--CCCCceecCCCCC-ChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhC
Q 048438 76 ATLDCCCLWATNPEYLKNKATESKPVV--DYKDWQITLSRSF-RSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSG 152 (239)
Q Consensus 76 ~P~g~g~l~~~~~~~l~~~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~ 152 (239)
+|.++|+++++++............+. .+......+++.. ..+++|.+++.++.+++++++++..++++++.+.|++
T Consensus 316 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~ 395 (514)
T 3mad_A 316 GAKGTSVILYRRPDLLHYQYFIAADWPGGLYFSPTFAGSRPGALSATAWAAMLSLGEEGYLDATRRILQAADRLKAGVRA 395 (514)
T ss_dssp CCSSCEEEEESSHHHHTTTCEEESSCTTCSEEESSSCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCeEEEEEeCHHHhccccccccccCCCcccCCccCCCCchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999976543322110000000 0011122233332 2478889999899999999999999999999999999
Q ss_pred CCCeEEEcCCCeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhcCcEEEEEEEECCEeEEEEEecC
Q 048438 153 DKRFEVVFPCHFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINASGKAYMTNVVLGGIYAIRFATGA 232 (239)
Q Consensus 153 ~~g~~~~~~~~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~ 232 (239)
+++++++.++ .+++.|...+.. ...+.++|.++|..+ .. ......+|+++++
T Consensus 396 ~~g~~~~~~~-~~~~~~~~~~~~------------------------~~~l~~~L~~~Gi~v-~g--~~~~~~~Ri~~~~ 447 (514)
T 3mad_A 396 IPSLKILGDP-LWVIAVASDELN------------------------IYQVMEEMAGRGWRL-NG--LHRPPAFHVALTL 447 (514)
T ss_dssp STTCEESSCC-SSEEEEECSSSC------------------------HHHHHHHHHTTTCBC-EE--ETTTTEEEEECCG
T ss_pred CCCeEEeCCC-eEEEEEeCCCCC------------------------HHHHHHHHHhcCCEe-cc--CCCCCeEEEEEec
Confidence 9999988665 557777654321 125677788887654 22 2334579999998
Q ss_pred CCCCcC
Q 048438 233 TLTEER 238 (239)
Q Consensus 233 ~~t~~~ 238 (239)
++++++
T Consensus 448 ~~~~~e 453 (514)
T 3mad_A 448 RHTEPG 453 (514)
T ss_dssp GGGSTT
T ss_pred CCCCHH
Confidence 888754
No 12
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=99.87 E-value=2.1e-22 Score=177.44 Aligned_cols=154 Identities=12% Similarity=0.174 Sum_probs=117.6
Q ss_pred ccEEEEEecCCCCcccccChhHHHHHHHHhCCEEEEeccccccccc-CcccccccCCCCCcceEEEcCcccCCCcccceE
Q 048438 4 IPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACI-FPEFRHFIDGVEGADSFSLNAHKWFFATLDCCC 82 (239)
Q Consensus 4 ~p~~vv~t~gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A~~~~~~~-~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~ 82 (239)
.+++|+.+.++|.+|.++|+++|+++|+++|+|+|||+||+..... .+.......+ ++|++++++|||+++|.|+|+
T Consensus 231 ~~~~vv~~~~nn~tG~i~~l~~I~~la~~~g~~v~vD~A~~~~~~g~~~~~~~~~~~--~~D~~~~s~hK~~~~p~g~G~ 308 (456)
T 2z67_A 231 NRPCVLSTLTFFPPRNSDDIVEIAKICENYDIPHIINGAYAIQNNYYLEKLKKAFKY--RVDAVVSSSDKNLLTPIGGGL 308 (456)
T ss_dssp CCEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHHTS--CCSEEEEEHHHHHCCCSSCEE
T ss_pred CeEEEEEeCCCCCCCCcCCHHHHHHHHHHcCCcEEEECcchHHHHHhhHHHHHhhCC--CCCEEEEcCCCCcCCCCCeEE
Confidence 5778889999999999999999999999999999999988755441 1211111222 499999999999999999999
Q ss_pred EEeeCcccccccccCCCCccCCCCceecCCCC-CChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCCC---CeEE
Q 048438 83 LWATNPEYLKNKATESKPVVDYKDWQITLSRS-FRSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSGDK---RFEV 158 (239)
Q Consensus 83 l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~---g~~~ 158 (239)
+++++++.+...... +. +.+. ..++.+|.++..++.++++++.++..++++++.+.|++++ |+.+
T Consensus 309 l~~~~~~~~~~l~~~------~~-----g~~~~~~~~~~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~v 377 (456)
T 2z67_A 309 VYSTDAEFIKEISLS------YP-----GRASATPVVNTLVSLLSMGSKNYLELVKNQKNSKKLLDELLNDLSKKTGGKF 377 (456)
T ss_dssp EEESCHHHHHHHHTT------SC-----SCBCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCB
T ss_pred EEEcCHHHHhhcCcC------CC-----CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCEe
Confidence 999765544333211 00 1111 1267788888888889999999999999999999999876 7766
Q ss_pred EcCCCeeEEEEEEc
Q 048438 159 VFPCHFAVVCFRVS 172 (239)
Q Consensus 159 ~~~~~~~iv~f~~~ 172 (239)
+. ++ ++++|++.
T Consensus 378 ~~-~~-~~v~~~~~ 389 (456)
T 2z67_A 378 LD-VE-SPIASCIS 389 (456)
T ss_dssp CC-CC-CSSEEEEE
T ss_pred cC-CC-CeEEEEEe
Confidence 54 44 89999883
No 13
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=99.84 E-value=3.5e-20 Score=158.85 Aligned_cols=202 Identities=18% Similarity=0.252 Sum_probs=142.3
Q ss_pred ccEEEEEecCCCCcccccChhHHHHHHHHhCCEEEEecccccccccCccc---------ccccCCCCCcceEEEcCcccC
Q 048438 4 IPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIFPEF---------RHFIDGVEGADSFSLNAHKWF 74 (239)
Q Consensus 4 ~p~~vv~t~gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~---------~~~~~~~~~~Ds~~~~~hK~l 74 (239)
.+.+|+++..+|.+|.+.|+++|.++|++||+++|+|+||+++.++.... ...... ++|++++++||++
T Consensus 171 ~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~s~~K~~ 248 (397)
T 3f9t_A 171 DVDGIIGIAGTTELGTIDNIEELSKIAKENNIYIHVDAAFGGLVIPFLDDKYKKKGVNYKFDFSL--GVDSITIDPHKMG 248 (397)
T ss_dssp CCCEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEECTTGGGTGGGCCGGGCCTTCCCCCSGGG--TCSEEECCTTTTT
T ss_pred CCeEEEEECCCCCCCCCCCHHHHHHHHHHhCCeEEEEccccchhhhhcccccccccccccccccc--cCCeEEEcccccc
Confidence 45678888899999999999999999999999999999999876543211 000111 4899999999999
Q ss_pred CCcccceEEEeeCcccccccccCCCCccCCCCceecCCCC-CChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCC
Q 048438 75 FATLDCCCLWATNPEYLKNKATESKPVVDYKDWQITLSRS-FRSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSGD 153 (239)
Q Consensus 75 ~~P~g~g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~ 153 (239)
++|.++|+++++++......................+++. ...+..+.+++.++.++++++.++..++++++.+.|++.
T Consensus 249 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 328 (397)
T 3f9t_A 249 HCPIPSGGILFKDIGYKRYLDVDAPYLTETRQATILGTRVGFGGACTYAVLRYLGREGQRKIVNECMENTLYLYKKLKEN 328 (397)
T ss_dssp CCCSSCEEEEESSGGGGGGTCEECTTSSSSEECSSCSSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCceEEEEeCHHHHHhhccCCccccCCCccccccccccchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 9999999999876544432211000000000011112222 244677777887778888999999999999999999998
Q ss_pred CCeEEEcCCCeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhcCcEEEEEEEECCEeEEEEEecCC
Q 048438 154 KRFEVVFPCHFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINASGKAYMTNVVLGGIYAIRFATGAT 233 (239)
Q Consensus 154 ~g~~~~~~~~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~ 233 (239)
|++++.++..++++|.+++ ...+.+.|.++|...... ....++|++++..
T Consensus 329 -g~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~l~~~gi~v~~~---~~~~~~Ri~~~~~ 378 (397)
T 3f9t_A 329 -NFKPVIEPILNIVAIEDED--------------------------YKEVCKKLRDRGIYVSVC---NCVKALRIVVMPH 378 (397)
T ss_dssp -TCCBSSCCSSSEEEEECTT--------------------------HHHHHHHHHHTTCBCEEC---SSSSEEEEECCTT
T ss_pred -CCEEEcCCCccEEEEEeCC--------------------------HHHHHHHHHhCCeEEecc---CCCCEEEEEEcCC
Confidence 8888878888999888653 125667777777553331 1247899998866
Q ss_pred CCCc
Q 048438 234 LTEE 237 (239)
Q Consensus 234 ~t~~ 237 (239)
+|.+
T Consensus 379 ~~~e 382 (397)
T 3f9t_A 379 IKRE 382 (397)
T ss_dssp CCHH
T ss_pred CCHH
Confidence 6544
No 14
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=99.84 E-value=7.9e-21 Score=163.17 Aligned_cols=198 Identities=11% Similarity=0.048 Sum_probs=134.7
Q ss_pred cEEEEEecCCCCcccccChhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCcccceEEE
Q 048438 5 PLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLW 84 (239)
Q Consensus 5 p~~vv~t~gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~ 84 (239)
+.+|.+++.+|.+|+++|+ +|+++|+++|||++|+++.++++ ++. .|.+++++|||+ +|.|+|++|
T Consensus 153 t~lV~~~h~et~tG~~~pi-----i~~~~~~~~~vD~~q~~g~~~id-----~~~---~~~~~~s~~K~~-gp~G~g~l~ 218 (377)
T 3e77_A 153 ASYVYYCANETVHGVEFDF-----IPDVKGAVLVCDMSSNFLSKPVD-----VSK---FGVIFAGAQKNV-GSAGVTVVI 218 (377)
T ss_dssp CSCEEEESEETTTTEECSS-----CCCCTTCCEEEECTTTTTSSCCC-----GGG---CSEEEEEGGGTT-SCTTCEEEE
T ss_pred ccEEEEeCccCchheEchh-----hhccCCCEEEEEcccccCCCCCc-----hhh---cCEEEEeccccc-CCCccEEEE
Confidence 4578899999999999999 47889999999999999999987 444 456899999999 699999999
Q ss_pred eeCcccccccccCCCCccCCCCcee---cCCCC--CChHHHHHHHHHhCHH-HHHHHHHHHHHHHHHHHHHHhCCCCeEE
Q 048438 85 ATNPEYLKNKATESKPVVDYKDWQI---TLSRS--FRSLKLWFVIRNYGME-NLRHFLRSHVNMARLFERLVSGDKRFEV 158 (239)
Q Consensus 85 ~~~~~~l~~~~~~~~~~~~~~~~~~---~~~~~--~~~~~~~~~l~~~g~~-g~~~~~~~~~~la~~l~~~l~~~~g~~~ 158 (239)
+++. .+....+..+.++++....- ..+++ ...+.+..+++.+-.+ |++++.++..++++++++.|++++|+.+
T Consensus 219 ~~~~-~l~~~~~~~p~~~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~l~~~GG~~~i~~~~~~l~~~l~~~L~~~~g~~~ 297 (377)
T 3e77_A 219 VRDD-LLGFALRECPSVLEYKVQAGNSSLYNTPPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFYV 297 (377)
T ss_dssp EETT-SCSCCCTTSCGGGCHHHHHTTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSEE
T ss_pred EcHH-HHhhccCCCCchhhHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhcCCcee
Confidence 9753 33322211111222110000 01122 1234555677777667 8999999999999999999999989986
Q ss_pred Ec-C--CCee-EEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhcCcEEEEEEEECCEeEEEEEecCCC
Q 048438 159 VF-P--CHFA-VVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINASGKAYMTNVVLGGIYAIRFATGATL 234 (239)
Q Consensus 159 ~~-~--~~~~-iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~ 234 (239)
.. + .+++ +++|.+++... + ..+...+.+.+.++|...... ......+|+|+++++
T Consensus 298 ~~~~~~~rs~~ivsf~~~~~~~---------------~----~~~~~~~l~~l~~~Gi~~~~g--~~~~g~iRiS~~~~~ 356 (377)
T 3e77_A 298 CPVEPQNRSKMNIPFRIGNAKG---------------D----DALEKRFLDKALELNMLSLKG--HRSVGGIRASLYNAV 356 (377)
T ss_dssp CCSCGGGBCSSEEEEEESSTTC---------------C----HHHHHHHHHHHHHTTEESCBC--CTTTCSEEEECCTTS
T ss_pred cCCCHHHcCCcEEEEEcCCCCC---------------c----hhHHHHHHHHHHHCCcEEeCC--CCcCCEEEEECCCCC
Confidence 43 1 2344 69999986321 0 122234556666666654332 122245999999988
Q ss_pred CCcC
Q 048438 235 TEER 238 (239)
Q Consensus 235 t~~~ 238 (239)
|.+|
T Consensus 357 t~ed 360 (377)
T 3e77_A 357 TIED 360 (377)
T ss_dssp CHHH
T ss_pred CHHH
Confidence 8764
No 15
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=99.83 E-value=6.1e-20 Score=161.84 Aligned_cols=197 Identities=10% Similarity=0.030 Sum_probs=136.4
Q ss_pred ccEEEEEecCCCCcccccChhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCC-CcccceE
Q 048438 4 IPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFF-ATLDCCC 82 (239)
Q Consensus 4 ~p~~vv~t~gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~-~P~g~g~ 82 (239)
.+.+|++++.+|.+|.+.|+++|.++|++||+++++|+||+.+..+++ +..+ ++|++++++||++. +|.|+|+
T Consensus 214 ~~~lv~~~~~~n~tG~~~~l~~i~~la~~~g~~vi~D~a~~~g~~~~~-----~~~~-~~D~~~~s~~K~l~~gp~~~g~ 287 (465)
T 3e9k_A 214 SIAVILFSGVHFYTGQHFNIPAITKAGQAKGCYVGFDLAHAVGNVELY-----LHDW-GVDFACWCSYKYLNAGAGGIAG 287 (465)
T ss_dssp GEEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCC-----HHHH-TCCEEEECSSSTTCCCTTCCCE
T ss_pred CeEEEEEeCcccCcceeecHHHHHHHHHHcCCEEEEEhhhhcCCcCCc-----hhhc-CCCEEEECcccccccCCCceEE
Confidence 567889999999999999999999999999999999999999988765 3322 39999999999994 8888999
Q ss_pred EEeeCcccccccccCCCCc--------cC--------CCCceecCCCC--CChHHHHHHHHHhCHHHHHHHHHHHHHHHH
Q 048438 83 LWATNPEYLKNKATESKPV--------VD--------YKDWQITLSRS--FRSLKLWFVIRNYGMENLRHFLRSHVNMAR 144 (239)
Q Consensus 83 l~~~~~~~l~~~~~~~~~~--------~~--------~~~~~~~~~~~--~~~~~~~~~l~~~g~~g~~~~~~~~~~la~ 144 (239)
+++++ ..+........+. +. .....++.++. ...+++..+++.+...++++..++..++++
T Consensus 288 l~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~aal~~~~~~~~~~~~~~~~~~~~ 366 (465)
T 3e9k_A 288 AFIHE-KHAHTIKPALVGWFGHELSTRFKMDNKLQLIPGVCGFRISNPPILLVCSLHASLEIFKQATMKALRKKSVLLTG 366 (465)
T ss_dssp EEECG-GGTTTSCCSSCCGGGBCHHHHTTCCSCCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred EEEcH-HHHhhcCCcccCccCCCCCcccccCCCcCcCCChHHhccCCccHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHH
Confidence 99854 3322211100000 00 00011112222 123555666666655567888888999999
Q ss_pred HHHHHHhCC----------CCeEEEcCC----CeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhc
Q 048438 145 LFERLVSGD----------KRFEVVFPC----HFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINAS 210 (239)
Q Consensus 145 ~l~~~l~~~----------~g~~~~~~~----~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 210 (239)
++.+.|+++ +|++++.+. ..++++|+++... ..+.+.|.++
T Consensus 367 ~l~~~L~~~~~~~~~~~~~~g~~~~~p~~~~~~g~~~~~~~~~~~-------------------------~~l~~~L~~~ 421 (465)
T 3e9k_A 367 YLEYLIKHNYGKDKAATKKPVVNIITPSHVEERGCQLTITFSVPN-------------------------KDVFQELEKR 421 (465)
T ss_dssp HHHHHHHHHCC---------CEEECSCSSGGGBCSCEEEEECCTT-------------------------CCHHHHHHTT
T ss_pred HHHHHHHhhccccccccCCCCeEEeCCCCHhhcccEEEEEecCCH-------------------------HHHHHHHHHC
Confidence 999999885 799998764 2678999987311 1566677777
Q ss_pred CcEEEEEEEECCEeEEEEEec-CCCCC
Q 048438 211 GKAYMTNVVLGGIYAIRFATG-ATLTE 236 (239)
Q Consensus 211 g~~~~~~~~~~g~~~lR~~~~-~~~t~ 236 (239)
|.+.. ..+..++|+++. .++|.
T Consensus 422 Gi~v~----~~~~~~iRis~~~~~~t~ 444 (465)
T 3e9k_A 422 GVVCD----KRNPNGIRVAPVPLYNSF 444 (465)
T ss_dssp TEECE----EETTTEEEEBCCTTTCCH
T ss_pred CEEEe----cCCCCEEEEeCcccCCCH
Confidence 65533 334579999984 44443
No 16
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=99.83 E-value=2e-21 Score=169.25 Aligned_cols=149 Identities=16% Similarity=0.158 Sum_probs=115.4
Q ss_pred ccEEEEEecCCCCcccccChhHHHHHHHHhCCEEEEecccccccccCcccc-cccCCCCCcceEEEcCcccCCCcccceE
Q 048438 4 IPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFR-HFIDGVEGADSFSLNAHKWFFATLDCCC 82 (239)
Q Consensus 4 ~p~~vv~t~gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~-~~~~~~~~~Ds~~~~~hK~l~~P~g~g~ 82 (239)
.|++|+++.+++.+|.+|||++|+++||+||+|+|||+|||+......+.. ...+. +++|+++.|+|||+++|.++++
T Consensus 198 ~~~~Vv~t~t~~g~g~~ddl~~Ia~ia~~~gi~l~VD~A~G~~~~~~~~l~~~a~~~-~~AD~~v~S~HK~l~a~~~~~~ 276 (450)
T 3bc8_A 198 HILCLHSTTACFAPRVPDRLEELAVICANYDIPHVVNNAYGLQSSKCMHLIQQGARV-GRIDAFVQSLDKNFMVPVGGAI 276 (450)
T ss_dssp GEEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHHHH-SCCCEEEEEHHHHHSCCSSCEE
T ss_pred CEEEEEEECCcCCCceecCHHHHHHHHHHCCCeEEEECCCchhhhhhHhHHHHHhcc-cCCCEEEECCccCCCchhccEE
Confidence 578888888888888999999999999999999999999998655432211 11110 3599999999999999999999
Q ss_pred EEeeCcccccccccCCCCccCCCCceecCCCCCChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCCC---CeEEE
Q 048438 83 LWATNPEYLKNKATESKPVVDYKDWQITLSRSFRSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSGDK---RFEVV 159 (239)
Q Consensus 83 l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~---g~~~~ 159 (239)
+++++++.+...... +... .....++.+|..+..+|.+++++.+++..++++++++.|++++ |..++
T Consensus 277 l~~rd~~~~~~~~~~------~~g~----~s~SpsL~l~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~g~~~l 346 (450)
T 3bc8_A 277 IAGFNEPFIQDISKM------YPGR----ASASPSLDVLITLLSLGCSGYRKLLKERKEMFVYLSTQLKKLAEAHNERLL 346 (450)
T ss_dssp EEESCHHHHHHHHHH------SCSC----BCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCBC
T ss_pred EEecCHHHHHHHHHH------hhcC----CcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhcCceec
Confidence 999877665443211 0000 0012358999998888999999999999999999999999888 88887
Q ss_pred cCCC
Q 048438 160 FPCH 163 (239)
Q Consensus 160 ~~~~ 163 (239)
..+.
T Consensus 347 ~~~~ 350 (450)
T 3bc8_A 347 QTPH 350 (450)
T ss_dssp CCTT
T ss_pred CCcc
Confidence 6543
No 17
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=99.81 E-value=3.2e-20 Score=160.07 Aligned_cols=192 Identities=12% Similarity=0.067 Sum_probs=129.7
Q ss_pred cEEEEEecCCCCcccc-cChhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCcccceEE
Q 048438 5 PLFLCATIGTTAITAV-DPLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCL 83 (239)
Q Consensus 5 p~~vv~t~gtt~~G~i-~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l 83 (239)
+.+|.+++.+|.+|++ +||++|+ +|+++||||+|+.|.++++ ++. .|.+++++|||+ +|.|+|++
T Consensus 167 t~lV~~~h~et~tG~~i~pi~~i~-----~g~~~~vDa~qs~g~~pid-----v~~---~~~~~~s~hK~l-GP~G~g~l 232 (386)
T 3qm2_A 167 AAYLHYCPNETIDGIAIDETPDFG-----PEVVVTADFSSTILSAPLD-----VSR---YGVIYAGAQKNI-GPAGLTLV 232 (386)
T ss_dssp CSCEEECSEETTTTEECCCCCCCC-----TTCCEEEECTTTTTSSCCC-----GGG---CSEEEEETTTTT-CCTTEEEE
T ss_pred CcEEEEECCcCCcCEecCchhhhc-----CCCEEEEEcccccCCCCCC-----ccc---cCEEEEeccccc-CCCccEEE
Confidence 4568899999999995 9999996 7999999999999999998 554 456789999999 59999999
Q ss_pred EeeCcccccccccCCCCccCCCCceecCC----CC--CChHHHHHHHHHhCHH-HHHHHHHHHHHHHHHHHHHHhCCCCe
Q 048438 84 WATNPEYLKNKATESKPVVDYKDWQITLS----RS--FRSLKLWFVIRNYGME-NLRHFLRSHVNMARLFERLVSGDKRF 156 (239)
Q Consensus 84 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~----~~--~~~~~~~~~l~~~g~~-g~~~~~~~~~~la~~l~~~l~~~~g~ 156 (239)
|+++ ..+....+..+..+++.. ..+.+ ++ ...+.+..+++.+... |++++.++..++++++++.|+++ ++
T Consensus 233 ~v~~-~~~~~~~~~~p~~~~~~~-~~~~~~~~gTp~v~~i~~l~~Al~~~~~~gG~~~i~~~~~~l~~~l~~~l~~~-~~ 309 (386)
T 3qm2_A 233 IVRE-DLLGKAHESCPSILDYTV-LNDNDSMFNTPPTFAWYLSGLVFKWLKAQGGVAAMHKINQQKAELLYGVIDNS-DF 309 (386)
T ss_dssp EEEG-GGCSCCCTTSCGGGCHHH-HHHC-------CCSHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTC-SS
T ss_pred EECH-HHHhhhcccCCcHHHHHH-HhhcCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHC-CC
Confidence 9975 333322211111111110 01111 21 2345666778777677 89999999999999999999987 65
Q ss_pred -EEEcCC--Ce-eEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhcCcEEEEEEEECCEeEEEEEecC
Q 048438 157 -EVVFPC--HF-AVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINASGKAYMTNVVLGGIYAIRFATGA 232 (239)
Q Consensus 157 -~~~~~~--~~-~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~ 232 (239)
....++ ++ ++++|.+++.+. + ..+.+.|.++|...... ......+|+|+++
T Consensus 310 ~~~~~~~~~rs~~iv~f~~~~~~~--------------------~---~~~~~~L~~~gI~~~~g--~~~~~~iRiS~~~ 364 (386)
T 3qm2_A 310 YRNDVAQANRSRMNVPFQLADNTL--------------------D---KVFLEESFAAGLHALKG--HRVVGGMRASIYN 364 (386)
T ss_dssp EECCBCGGGBCSSEEEEEESSGGG--------------------H---HHHHHHHHHTTEECCBC--CTTTCSEEEECCT
T ss_pred cccCCCHHHcCceEEEEECCCccc--------------------c---HHHHHHHHHCCCEEeCC--CCCcCeEEEEcCC
Confidence 322222 33 589999975321 1 24555566666553322 1112349999999
Q ss_pred CCCCcC
Q 048438 233 TLTEER 238 (239)
Q Consensus 233 ~~t~~~ 238 (239)
++|.+|
T Consensus 365 ~~t~ed 370 (386)
T 3qm2_A 365 AMPIEG 370 (386)
T ss_dssp TSCHHH
T ss_pred CCCHHH
Confidence 988764
No 18
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=99.80 E-value=1.6e-19 Score=153.14 Aligned_cols=200 Identities=13% Similarity=0.030 Sum_probs=136.6
Q ss_pred ccEEEEEecCCCCcccccChhHHHHHHHHh-CCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCcccceE
Q 048438 4 IPLFLCATIGTTAITAVDPLKPLCDVAKQF-GIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATLDCCC 82 (239)
Q Consensus 4 ~p~~vv~t~gtt~~G~i~pl~~i~~i~~~~-gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~ 82 (239)
.+-+|++++.+|.+|.+.|+++|+++|++| |+++|+|++|+.+..+.+ .. .+|++++++|||+++|.|+|+
T Consensus 130 ~~~~v~~~~~~nptG~~~~l~~i~~la~~~p~~~li~D~a~~~~~~~~~-----~~---~~d~~~~s~~K~~~~~~G~g~ 201 (362)
T 3ffr_A 130 DAEIICLTHNETSSGVSMPVEDINTFRDKNKDALIFVDAVSSLPYPKFD-----WT---KIDSVFFSVQKCFGLPAGLGV 201 (362)
T ss_dssp TCCEEEEESEETTTTEECCHHHHTTSGGGSTTSEEEEECTTTTTSSCCC-----TT---SCSEEEEETTSTTCCCSCCEE
T ss_pred CccEEEEEcCCCCcceeCCHHHHHHHHHhCCCCEEEEecccccCCcccC-----hh---HCcEEEEecccccCCCCceEE
Confidence 466788889999999999999999999999 999999999988766543 22 289999999999998999999
Q ss_pred EEeeCcccccccc---cC---CCCccCCCC-------ceecCCCC-CChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH
Q 048438 83 LWATNPEYLKNKA---TE---SKPVVDYKD-------WQITLSRS-FRSLKLWFVIRNYGMENLRHFLRSHVNMARLFER 148 (239)
Q Consensus 83 l~~~~~~~l~~~~---~~---~~~~~~~~~-------~~~~~~~~-~~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~ 148 (239)
+++++ +.+.... .. ...+.+... .....+.. .....+..+++.+..++++++.++..++++++.+
T Consensus 202 ~~~~~-~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~ 280 (362)
T 3ffr_A 202 WILND-RVIEKSKALLAKRKSIGTYHTIPSMLEKARVNQTPETPNAMNIFLLGKVTGDMLQISADGIRKQTEEKAALINT 280 (362)
T ss_dssp EEEEH-HHHHHHHHHHHTTCCCCSTTSHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred EEECH-HHHHHhhhccccCCCCcccccHHHHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHH
Confidence 88754 3221111 00 001111000 00011111 1223444555555455678888999999999999
Q ss_pred HHhCCCCeEEEcCC----CeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhcCcEEEEEEEECCEe
Q 048438 149 LVSGDKRFEVVFPC----HFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINASGKAYMTNVVLGGIY 224 (239)
Q Consensus 149 ~l~~~~g~~~~~~~----~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~ 224 (239)
.|+++||++++.+. ...+++|.+++ . ...+.+.|.++|..........+..
T Consensus 281 ~L~~~~g~~~~~~~~~~~~~~~~~~~~~~-~------------------------~~~~~~~l~~~gi~~~~g~~~~~~~ 335 (362)
T 3ffr_A 281 YIESSKVFSFGVEDAKLRSMTTIVANTTM-L------------------------PGEINKILEPFDMAVGAGYGSKKET 335 (362)
T ss_dssp HHHHCSSEEESSSCGGGBCSSEEEEEESS-C------------------------HHHHHHHHGGGTEEEEECSGGGTTT
T ss_pred HHHHccCceeccCChhhcCCceEEEecCC-C------------------------HHHHHHHHHHCCeEEecCccccCCC
Confidence 99999999987632 35678888764 2 1267778887866555433223457
Q ss_pred EEEEEecCCCCCc
Q 048438 225 AIRFATGATLTEE 237 (239)
Q Consensus 225 ~lR~~~~~~~t~~ 237 (239)
++|++++..+|.+
T Consensus 336 ~iRis~~~~~~~e 348 (362)
T 3ffr_A 336 QIRIANFPAHSLE 348 (362)
T ss_dssp EEEEECCTTSCHH
T ss_pred EEEEECCCCCCHH
Confidence 8999998877654
No 19
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=99.79 E-value=2e-19 Score=155.35 Aligned_cols=204 Identities=13% Similarity=0.013 Sum_probs=133.6
Q ss_pred ccEEEEEecCCCCcccccChhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCcccceEE
Q 048438 4 IPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCL 83 (239)
Q Consensus 4 ~p~~vv~t~gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l 83 (239)
.+.+|++++.+|.+|.+.|+++|+++|++||+++|+|++|+.+..+.+ .... ++|++++++|||+++|.|+|++
T Consensus 138 ~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~-----~~~~-~~d~~~~s~~K~l~~~~g~g~~ 211 (411)
T 3nnk_A 138 RPRLLLTVQGDTSTTMLQPLAELGEICRRYDALFYTDATASLGGNPLE-----TDVW-GLDAVSAGMQKCLGGPSGTSPI 211 (411)
T ss_dssp CCSEEEEESEETTTTEECCCTTHHHHHHHHTCEEEEECTTTBTTBCCC-----TTTT-TCSEEECCSTTTTCCCSSEEEE
T ss_pred CCeEEEEeCCCCCcceeccHHHHHHHHHHcCCEEEEECCcccCCcccc-----hhcc-CCcEEEecCccccCCCCceEEE
Confidence 356788889999999999999999999999999999999998776554 2222 4999999999999999999999
Q ss_pred EeeCcccccccccC--------------------CCCccCCC-------CceecCCC-C-CChHHHHHHHHHhCHHHHHH
Q 048438 84 WATNPEYLKNKATE--------------------SKPVVDYK-------DWQITLSR-S-FRSLKLWFVIRNYGMENLRH 134 (239)
Q Consensus 84 ~~~~~~~l~~~~~~--------------------~~~~~~~~-------~~~~~~~~-~-~~~~~~~~~l~~~g~~g~~~ 134 (239)
++++ +.+...... ...+.+.. ......+. . .....+..+++.+..+++++
T Consensus 212 ~~~~-~~~~~~~~~~~~~~~~~g~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~ 290 (411)
T 3nnk_A 212 TLSA-RMEEAIRRRKCVEEGIRTDAHRDGDEEMIYSNYFDLGMVMDYWGPERLNHHTEATTALFGARECARLILQEGLDY 290 (411)
T ss_dssp EECH-HHHHHHHTTCCCCGGGCCTTCCCCSSCCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHH
T ss_pred EECH-HHHHHHhhcccccccccccccccccCCCCcccccchHHHHhhhccccCCCCCCCHHHHHHHHHHHHHHHHhhHHH
Confidence 9854 222111000 00000000 00001111 1 11233445565555556788
Q ss_pred HHHHHHHHHHHHHHHHhCCCCeEEEcCCC---eeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhc-
Q 048438 135 FLRSHVNMARLFERLVSGDKRFEVVFPCH---FAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINAS- 210 (239)
Q Consensus 135 ~~~~~~~la~~l~~~l~~~~g~~~~~~~~---~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~- 210 (239)
+.++..++++++.+.|++. |++++.++. .++++|.++... + ...+.+.|.++
T Consensus 291 ~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~----------------~-------~~~l~~~l~~~~ 346 (411)
T 3nnk_A 291 GIARHKLHGDALVKGIQAM-GLETFGDLKHKMNNVLGVVIPQGI----------------N-------GDQARKLMLEDF 346 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHT-TCCBCSCGGGBCSSEEEEECCTTC----------------C-------HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHc-CCEeCCCcccccccEEEEECCCCC----------------C-------HHHHHHHHHHhc
Confidence 8889999999999999986 888775542 578888885321 0 12556667666
Q ss_pred CcEEEEEEEECCEeEEEEEecCCCCCcC
Q 048438 211 GKAYMTNVVLGGIYAIRFATGATLTEER 238 (239)
Q Consensus 211 g~~~~~~~~~~g~~~lR~~~~~~~t~~~ 238 (239)
|..........+..++|++++.+.+++|
T Consensus 347 gi~v~~g~~~~~~~~iRi~~~~~~~~~~ 374 (411)
T 3nnk_A 347 GIEIGTSFGPLHGKVWRIGTMGYNARKD 374 (411)
T ss_dssp SEEEEECCGGGTTTEEEEECCGGGCSHH
T ss_pred CeEEeCccCCCCCCEEEEeCccCcCCHH
Confidence 5554432222234689999867665443
No 20
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.79 E-value=7.1e-20 Score=156.55 Aligned_cols=193 Identities=10% Similarity=0.046 Sum_probs=127.6
Q ss_pred cEEEEEecCCCCcccccChhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCcccceEEE
Q 048438 5 PLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLW 84 (239)
Q Consensus 5 p~~vv~t~gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~ 84 (239)
+.+|.+++.+|.+|++.|. +++ +|+++|||++|+.+.++++ ++ .+|++++++|||+ +|.|+|++|
T Consensus 141 t~lv~~~~~e~~tG~~~~~-----i~~-~~~~~~vD~~q~~g~~~id-----~~---~~d~~~~s~~K~~-gp~G~g~l~ 205 (361)
T 3m5u_A 141 ADYAYICSNNTIYGTQYQN-----YPK-TKTPLIVDASSDFFSRKVD-----FS---NIALFYGGVQKNA-GISGLSCIF 205 (361)
T ss_dssp SSEEEEESEETTTTEECSS-----CCC-CSSCEEEECGGGTTSSCCC-----CT---TEEEEEEETTTTS-SCTTCEEEE
T ss_pred CCEEEEeCCCCCcceeCCc-----ccc-cCCEEEEEcccccCCCCCC-----cc---cCCEEEEechhcc-CCCccEEEE
Confidence 4578889999999998662 334 4999999999999999987 44 3899999999999 599999999
Q ss_pred eeCccccccccc-CCCCccCCCCceecC---CCC--CChHHHHHHHHHhCHH-HHHHHHHHHHHHHHHHHHHHhCCCCe-
Q 048438 85 ATNPEYLKNKAT-ESKPVVDYKDWQITL---SRS--FRSLKLWFVIRNYGME-NLRHFLRSHVNMARLFERLVSGDKRF- 156 (239)
Q Consensus 85 ~~~~~~l~~~~~-~~~~~~~~~~~~~~~---~~~--~~~~~~~~~l~~~g~~-g~~~~~~~~~~la~~l~~~l~~~~g~- 156 (239)
+++. .+....+ ..+.+.++....-.. +++ ...+.+..+++.+... |++++.++..++++++++.|++++|+
T Consensus 206 ~~~~-~~~~~~~~~~p~~~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~l~~~gG~~~i~~~~~~l~~~l~~~L~~~~g~~ 284 (361)
T 3m5u_A 206 IRKD-MLERSKNKQIPSMLNYLTHAENQSLFNTPPTFAIYMFNLEMDWLLNQGGLDKVHEKNSQKATMLYECIDLSNGFY 284 (361)
T ss_dssp EEHH-HHHHHHTCCCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHTSTTSE
T ss_pred EcHH-HHhhhcCCCCCceeehHHHhhcCCCCCCccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCee
Confidence 9753 3221111 011122111000011 121 1234555667766555 78888899999999999999998776
Q ss_pred EEEcCC--C-eeEEEEEEcC-CCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhcCcEEEEEEEECCEeEEEEEecC
Q 048438 157 EVVFPC--H-FAVVCFRVSP-LPVLMDKLKTKYENCLLSEEEQINEFNRELLESINASGKAYMTNVVLGGIYAIRFATGA 232 (239)
Q Consensus 157 ~~~~~~--~-~~iv~f~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~ 232 (239)
+++.++ + .++++|.+++ .+. + ..+...|.++|...... ......+|+++++
T Consensus 285 ~~~~~~~~rs~~ivsf~~~~~~~~--------------------~---~~~~~~L~~~gI~~~~g--~~~~g~iRiS~~~ 339 (361)
T 3m5u_A 285 KGHADKKDRSLMNVSFNIAKNKDL--------------------E---PLFVKEAEEAGMIGLKG--HRILGGIRASIYN 339 (361)
T ss_dssp EESSCGGGBCSSEEEEEESSCTTH--------------------H---HHHHHHHHHTTEECCBC--CTTTCSEEEECCT
T ss_pred eccCCHHHcCCeEEEEECCCchhh--------------------h---HHHHHHHHHCCCEEecC--CCccCeEEEEccC
Confidence 665432 2 3589999986 221 1 24555666666553321 1112459999999
Q ss_pred CCCCcC
Q 048438 233 TLTEER 238 (239)
Q Consensus 233 ~~t~~~ 238 (239)
++|.+|
T Consensus 340 ~~t~ed 345 (361)
T 3m5u_A 340 ALNLDQ 345 (361)
T ss_dssp TSCHHH
T ss_pred CCCHHH
Confidence 988764
No 21
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=99.79 E-value=2.5e-19 Score=155.00 Aligned_cols=203 Identities=13% Similarity=0.061 Sum_probs=135.5
Q ss_pred cEEEEEecCCCCcccccChhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCcccceEEE
Q 048438 5 PLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLW 84 (239)
Q Consensus 5 p~~vv~t~gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~ 84 (239)
+.+|++++.+|.+|.+.|+++|.++|++||+++|+|++|+.+..+.+ .... ++|++++++|||+++|.|+|+++
T Consensus 137 ~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~-----~~~~-~~d~~~~s~~K~l~g~~g~g~~~ 210 (416)
T 3isl_A 137 PKIVAMVHGETSTGRIHPLKAIGEACRTEDALFIVDAVATIGGCEVK-----VDEW-KIDAAIGGTQKCLSVPSGMAPIT 210 (416)
T ss_dssp CSEEEEESEETTTTEECCCHHHHHHHHHTTCEEEEECTTTTTTSCCC-----TTTT-TCSEEECCSSSTTCCCSSEEEEE
T ss_pred CcEEEEEccCCCCceecCHHHHHHHHHHcCCEEEEECCccccCCCcc-----hhhc-CCCEEEecCccccCCCCCeEEEE
Confidence 56788899999999999999999999999999999999998776554 2222 49999999999999999999998
Q ss_pred eeCccccccccc----------------------CCCCccCCC-------CceecCCCC--CChHHHHHHHHHhCHHHHH
Q 048438 85 ATNPEYLKNKAT----------------------ESKPVVDYK-------DWQITLSRS--FRSLKLWFVIRNYGMENLR 133 (239)
Q Consensus 85 ~~~~~~l~~~~~----------------------~~~~~~~~~-------~~~~~~~~~--~~~~~~~~~l~~~g~~g~~ 133 (239)
+++ +.+..... ....+.+.. ......+.. .....+..+++.+...+++
T Consensus 211 ~~~-~~~~~~~~~~~~~~Gw~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~ 289 (416)
T 3isl_A 211 YNE-RVADVIAARKKVERGIATQADRAALSGNRPITSNYFDLSQLEDYWSERRLNHHTEATTMLYALREGVRLVLEEGLE 289 (416)
T ss_dssp ECH-HHHHHHHTC------------------CCCCSCSTTCHHHHHHHTSTTCCCSSCCCHHHHHHHHHHHHHHHHHCHH
T ss_pred ECH-HHHHHhhccccccccccccccchhccCCCCCCccccchHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHhhHH
Confidence 854 22211110 000000000 001111111 1123444556555555678
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCeEEEcCCC---eeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhc
Q 048438 134 HFLRSHVNMARLFERLVSGDKRFEVVFPCH---FAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINAS 210 (239)
Q Consensus 134 ~~~~~~~~la~~l~~~l~~~~g~~~~~~~~---~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 210 (239)
+..++..++++++.+.|++. |++++.++. .++++|.++... + ...+.+.|.++
T Consensus 290 ~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~----------------~-------~~~l~~~L~~~ 345 (416)
T 3isl_A 290 TRFERHRHHEAALAAGIKAM-GLRLFGDDSCKMPVVTCVEIPGGI----------------D-------GESVRDMLLAQ 345 (416)
T ss_dssp HHHHHHHHHHHHHHHHHHHT-TCCBCSCGGGBCTTEEEEECCTTC----------------C-------HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHc-CCEeccCccccCCcEEEEeCCCCC----------------C-------HHHHHHHHHHh
Confidence 88899999999999999985 888776543 468889885321 0 12566667666
Q ss_pred -CcEEEEEEEECCEeEEEEEecCCCCCcC
Q 048438 211 -GKAYMTNVVLGGIYAIRFATGATLTEER 238 (239)
Q Consensus 211 -g~~~~~~~~~~g~~~lR~~~~~~~t~~~ 238 (239)
|..........+..++|++++.++|++|
T Consensus 346 ~gi~v~~g~~~~~~~~iRi~~~~~~~~~e 374 (416)
T 3isl_A 346 FGIEIASSFGPLAGKIWRIGTMGYSCRKE 374 (416)
T ss_dssp HCEECBCCCSTTTTTEEEEECCGGGCSHH
T ss_pred CCEEEecCCCCCCCCEEEEecccCCCcHH
Confidence 5443322222345689999988887765
No 22
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=99.78 E-value=3.8e-19 Score=150.23 Aligned_cols=204 Identities=14% Similarity=0.041 Sum_probs=132.9
Q ss_pred ccEEEEEecCCCCcccccChhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCcccceEE
Q 048438 4 IPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCL 83 (239)
Q Consensus 4 ~p~~vv~t~gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l 83 (239)
.|.+|++++.+|.+|.+.|+++|.++|++||+++|+|++|+.+..+.+ +..+ ++|++++++|||+++|.|+|++
T Consensus 124 ~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~D~a~~~~~~~~~-----~~~~-~~d~~~~s~~K~~~~~~g~G~~ 197 (353)
T 2yrr_A 124 RYRMVALVHGETSTGVLNPAEAIGALAKEAGALFFLDAVTTLGMLPFS-----MRAM-GVDYAFTGSQKCLSAPPGLAPI 197 (353)
T ss_dssp CCSEEEEESEETTTTEECCHHHHHHHHHHHTCEEEEECTTTTTTSCCC-----HHHH-TCSEEECCTTSTTCCCSSCEEE
T ss_pred CCCEEEEEccCCCcceecCHHHHHHHHHHcCCeEEEEcCccccccccc-----cccc-CceEEEecCcccccCCCceEEE
Confidence 356788899999999999999999999999999999999987655432 2222 3899999999999999999999
Q ss_pred EeeCcccccccccCCCCccCCC-------CceecCCCCC-ChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCCCC
Q 048438 84 WATNPEYLKNKATESKPVVDYK-------DWQITLSRSF-RSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSGDKR 155 (239)
Q Consensus 84 ~~~~~~~l~~~~~~~~~~~~~~-------~~~~~~~~~~-~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g 155 (239)
++++ +.+.........+.+.. .....++... ....+..+++.+...+++++.++..++++++.+.|++. |
T Consensus 198 ~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g 275 (353)
T 2yrr_A 198 AASL-EARKAFTGKRGWYLDLARVAEHWERGGYHHTTPVLLHYALLEALDLVLEEGVAARERRAREVYAWVLEELKAR-G 275 (353)
T ss_dssp EECH-HHHHHCCCCSCSTTCHHHHHHHHTTCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-T
T ss_pred EECH-HHHHHhccCCCccccHHHHhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHC-C
Confidence 8854 33322110000000000 0001111111 11333445555544557788888999999999999987 9
Q ss_pred eEEEcCC--CeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhcCcEEEEEEEECCEeEEEEEecCC
Q 048438 156 FEVVFPC--HFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINASGKAYMTNVVLGGIYAIRFATGAT 233 (239)
Q Consensus 156 ~~~~~~~--~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~ 233 (239)
++++.++ ...+++|+++... + ...+.+.|.++|..+.......+..++|++++..
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~----------------~-------~~~~~~~l~~~gi~v~~g~~~~~~~~iRi~~~~~ 332 (353)
T 2yrr_A 276 FRPYPKASPLPTVLVVRPPEGV----------------D-------ADRLVRALYAEGVAVAGGIGPTRGQVLRLGLMGE 332 (353)
T ss_dssp CEESCSSSBCTTEEEEECCTTC----------------C-------HHHHHHHHHHTTEECEECCGGGTTTCEEEECSGG
T ss_pred CccccCccCCCeEEEEECCCCC----------------C-------HHHHHHHHHHCCEEEeCCccccCCCeEEEecCcc
Confidence 9887654 3457778875211 0 1256667777765544332222346899998777
Q ss_pred CCCcC
Q 048438 234 LTEER 238 (239)
Q Consensus 234 ~t~~~ 238 (239)
.|++|
T Consensus 333 ~~~~~ 337 (353)
T 2yrr_A 333 GARRE 337 (353)
T ss_dssp GSCHH
T ss_pred CCHHH
Confidence 77654
No 23
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=99.78 E-value=5e-18 Score=145.44 Aligned_cols=201 Identities=13% Similarity=0.118 Sum_probs=133.8
Q ss_pred ccEEEEEecCCCCcccccChhHHHHHHH----HhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCccc
Q 048438 4 IPLFLCATIGTTAITAVDPLKPLCDVAK----QFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATLD 79 (239)
Q Consensus 4 ~p~~vv~t~gtt~~G~i~pl~~i~~i~~----~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g 79 (239)
.+.+|+++..+|.+|.+.|+++|.++|+ ++|+++++|++|+.+..+.+ +... .+|+++.++|||+++|.|
T Consensus 154 ~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~~~li~Dea~~~g~~~~~-----~~~~-~~d~~~~s~~K~~~~~~g 227 (390)
T 1elu_A 154 KTRLVILSHLLWNTGQVLPLAEIMAVCRRHQGNYPVRVLVDGAQSAGSLPLD-----FSRL-EVDYYAFTGHKWFAGPAG 227 (390)
T ss_dssp TEEEEEEESBCTTTCCBCCHHHHHHHHHHCCSSSCCEEEEECTTTBTTBCCC-----TTTS-CCSEEEEESSSTTCCCTT
T ss_pred CceEEEEeccccCCceecCHHHHHHHHhhhhhhcCcEEEEEcccccCCcCCC-----hhhc-CCCEEEccccccccCCCc
Confidence 3567888999999999999999999999 99999999999997765443 2222 489999999999999999
Q ss_pred ceEEEeeCcccccccccCC--CCc----cCCCCc-------eecCCCC--CChHHHHHHHHHhCHHH-HHHHHHHHHHHH
Q 048438 80 CCCLWATNPEYLKNKATES--KPV----VDYKDW-------QITLSRS--FRSLKLWFVIRNYGMEN-LRHFLRSHVNMA 143 (239)
Q Consensus 80 ~g~l~~~~~~~l~~~~~~~--~~~----~~~~~~-------~~~~~~~--~~~~~~~~~l~~~g~~g-~~~~~~~~~~la 143 (239)
+|++++++ +.+....... ... ++...+ .+..+.. .....+..+++.+...+ ++++.++..+++
T Consensus 228 ~G~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~l~~~~~~~~~~~~~~~~~ 306 (390)
T 1elu_A 228 VGGLYIHG-DCLGEINPTYVGWRSITYGAKGEPTGWAEGGKRFEVATSAYPQYAGLLAALQLHQRQGTAEERYQAICQRS 306 (390)
T ss_dssp CEEEEECT-TTGGGCCCCSCCTTTEEECTTSCEEEECSGGGGGCCSCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_pred eEEEEECH-HhHhhcCCccccCCcccccccCcccccccchHhhCCCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 99999864 3333221100 000 000001 1111111 11123334555543444 777888888999
Q ss_pred HHHHHHHhCCCCeEEEcC--CCeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhcCcEEEEEEEEC
Q 048438 144 RLFERLVSGDKRFEVVFP--CHFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINASGKAYMTNVVLG 221 (239)
Q Consensus 144 ~~l~~~l~~~~g~~~~~~--~~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~ 221 (239)
+++.+.|++++|++++.+ ...++++|.++... + ...+.+.|.++|.......
T Consensus 307 ~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~----------------~-------~~~~~~~l~~~gi~v~~~~--- 360 (390)
T 1elu_A 307 EFLWRGLNQLPHVHCLATSAPQAGLVSFTVDSPL----------------G-------HRAIVQKLEEQRIYLRTIA--- 360 (390)
T ss_dssp HHHHHHHHHSTTEEESCSSCCSSSEEEEEECSSS----------------C-------HHHHHHHHHHTTEECEEET---
T ss_pred HHHHHHHHhcCCcEEecCccccccEEEEEcCCCC----------------C-------HHHHHHHHHHCCEEEEecC---
Confidence 999999999889998764 36789999885311 0 1256667766665544322
Q ss_pred CEeEEEEEecCCCCCc
Q 048438 222 GIYAIRFATGATLTEE 237 (239)
Q Consensus 222 g~~~lR~~~~~~~t~~ 237 (239)
+..++|++++...|.+
T Consensus 361 ~~~~iRis~~~~~~~~ 376 (390)
T 1elu_A 361 DPDCIRACCHYITDEE 376 (390)
T ss_dssp TTTEEEEECCTTCCHH
T ss_pred CCCeEEEecccCCCHH
Confidence 4468999986666554
No 24
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.77 E-value=8.5e-19 Score=148.28 Aligned_cols=200 Identities=13% Similarity=-0.004 Sum_probs=131.3
Q ss_pred cEEEEEecCCCCcccccChhHHHHHHHHh--CCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCcccceE
Q 048438 5 PLFLCATIGTTAITAVDPLKPLCDVAKQF--GIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATLDCCC 82 (239)
Q Consensus 5 p~~vv~t~gtt~~G~i~pl~~i~~i~~~~--gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~ 82 (239)
+.+|+.++.+|.+|.+.|+++|.++|++| |+++|+|++|+.+..+++ .... ++|++++++|||+++|.|+|+
T Consensus 122 ~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~-----~~~~-~~d~~~~s~~K~~~~~~g~G~ 195 (352)
T 1iug_A 122 YAGLLLVHSETSTGALADLPALARAFKEKNPEGLVGADMVTSLLVGEVA-----LEAM-GVDAAASGSQKGLMCPPGLGF 195 (352)
T ss_dssp CSEEEEESEETTTTEECCHHHHHHHHHHHCTTCEEEEECTTTBTTBCCC-----SGGG-TCSEEEEESSSTTCCCSCEEE
T ss_pred CcEEEEEEecCCcceecCHHHHHHHHHhhCCCCEEEEECCccccCccee-----cccc-CeeEEEecCcccccCCCceeE
Confidence 45788889999999999999999999999 999999999987765443 2222 389999999999999999999
Q ss_pred EEeeCcccccccccCCCCccCCC-------CceecCCCCC-ChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 048438 83 LWATNPEYLKNKATESKPVVDYK-------DWQITLSRSF-RSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSGDK 154 (239)
Q Consensus 83 l~~~~~~~l~~~~~~~~~~~~~~-------~~~~~~~~~~-~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~ 154 (239)
+++++ +.+..... ...+.+.. ......+... ....+..+++.+... ++++.++..++++++.+.|+++
T Consensus 196 ~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~-~~~~~~~~~~~~~~l~~~L~~~- 271 (352)
T 1iug_A 196 VALSP-RALERLKP-RGYYLDLARELKAQKEGESAWTPAINLVLAVAAVLEEVLPR-LEEHLALKAWQNALLYGVGEEG- 271 (352)
T ss_dssp EEECH-HHHHTCCC-CSSTTCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHGGG-HHHHHHHHHHHHHHHHHHHHHT-
T ss_pred EEECH-HHHHHhhC-CCceeeHHHHHhhcccCCCCCCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHC-
Confidence 99854 33322110 00011100 0000011111 112333455544333 6778888889999999999987
Q ss_pred CeEEEcCC-CeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhcCcEEEEEEEECCEeEEEEEecCC
Q 048438 155 RFEVVFPC-HFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINASGKAYMTNVVLGGIYAIRFATGAT 233 (239)
Q Consensus 155 g~~~~~~~-~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~ 233 (239)
|++++.+. ..+++.|++++.. + ...+.++|.++|..........+..++|++++..
T Consensus 272 g~~~~~~~~~~~~~~~~~~~~~----------------~-------~~~~~~~l~~~gi~v~~~~~~~~~~~iRi~~~~~ 328 (352)
T 1iug_A 272 GLRPVPKRFSPAVAAFYLPEGV----------------P-------YARVKEAFAQRGAVIAGGQGPLKGKVFRLSLMGA 328 (352)
T ss_dssp TCEESCSSBCTTCEEEECCTTC----------------C-------HHHHHHHHHTTTEECEECCGGGTTTEEEECCCSS
T ss_pred CCcccccccCCeEEEEEcCCCC----------------C-------HHHHHHHHHHCCEEEEeCCCccCCCEEEEEcccc
Confidence 89887654 5678888886311 0 1256677777765444332112346899998876
Q ss_pred CCCc
Q 048438 234 LTEE 237 (239)
Q Consensus 234 ~t~~ 237 (239)
+|.+
T Consensus 329 ~~~~ 332 (352)
T 1iug_A 329 YDRY 332 (352)
T ss_dssp CCHH
T ss_pred CCHH
Confidence 6654
No 25
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=99.77 E-value=5.3e-19 Score=152.01 Aligned_cols=200 Identities=11% Similarity=0.069 Sum_probs=129.7
Q ss_pred cEEEEEecCCCCcccccC---hhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCcccce
Q 048438 5 PLFLCATIGTTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATLDCC 81 (239)
Q Consensus 5 p~~vv~t~gtt~~G~i~p---l~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g 81 (239)
+-+|++++.+|.+|.+.| +++|+++|++||+++|+|++|+ |..+++ ...+ ++|++++++|||+++|.|+|
T Consensus 136 ~~~v~~~~~~~~~G~~~~~~~l~~i~~~~~~~~~~li~D~~~~-g~~~~~-----~~~~-~~d~~~~s~~K~l~~~~g~g 208 (379)
T 3ke3_A 136 SAIVYAPHVETSSGIILSEEYIKALSEAVHSVGGLLVIDCIAS-GCVWLD-----MKEL-GIDVLISAPQKGWSSTPCAG 208 (379)
T ss_dssp CSEEEEESEETTTTEECCHHHHHHHHHHHHHTTCEEEEECTTC-TTCCCC-----HHHH-TCSEEEECTTTTTCSCCCEE
T ss_pred CcEEEEEeecCCCceeCCHHHHHHHHHHHHHcCCEEEEEeccc-CCcccc-----cccc-CCCEEEecchhhcCCCCceE
Confidence 457888999999999999 9999999999999999999998 655554 2222 39999999999999999999
Q ss_pred EEEeeCccccccccc--CCCCccCCCCc-----eec-CCCCC-------ChHHHHHHHHHhCHHHHHHHHHHHHHHHHHH
Q 048438 82 CLWATNPEYLKNKAT--ESKPVVDYKDW-----QIT-LSRSF-------RSLKLWFVIRNYGMENLRHFLRSHVNMARLF 146 (239)
Q Consensus 82 ~l~~~~~~~l~~~~~--~~~~~~~~~~~-----~~~-~~~~~-------~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l 146 (239)
++++++ +.+..... ..+.+.+...| .++ +++.+ ...++..+++.+..++++++.++..++++++
T Consensus 209 ~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~t~~~~~~~a~~aal~~~~~~g~~~~~~~~~~l~~~l 287 (379)
T 3ke3_A 209 LVMLSA-AAIKKVESTESNCFSLDLKQWLTIMRAYENGGHAYHATMPTDSLRQFRDAILEAKEIGFDILRDAQWELGNRV 287 (379)
T ss_dssp EEEECH-HHHHHHHTCCCSCSTTCHHHHHHHHHHHHTTSCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred EEEECH-HHHHhhhcCCCCceeecHHHHHHHHHhhhccCCCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHH
Confidence 999854 33221111 01111111001 011 11111 1133445566665667888889999999999
Q ss_pred HHHHhCCCCeEEEcCC--CeeEEE-EEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhcCcEEEEEEE----
Q 048438 147 ERLVSGDKRFEVVFPC--HFAVVC-FRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINASGKAYMTNVV---- 219 (239)
Q Consensus 147 ~~~l~~~~g~~~~~~~--~~~iv~-f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~---- 219 (239)
++.|+++ |++++.++ .++++. |..++. .. ...+.|.++|....+...
T Consensus 288 ~~~l~~~-g~~~~~~~~~~~~~i~~~~~~~~-----------------------~~--~~~~~L~~~Gi~v~~g~~~~~~ 341 (379)
T 3ke3_A 288 RKVLTDK-GIESVAAEGFEAPGVVVSYTERD-----------------------DM--HKGSAFAEAGLQIAAGVPLKVG 341 (379)
T ss_dssp HHHHHHT-TCCBSBCTTCBCSSEEEEECSCH-----------------------HH--HSSHHHHHTTCCCEECCCCSSC
T ss_pred HHHHHHc-CCEecCCccccCceEEEEccCCc-----------------------ch--HHHHHHHHCCeEEeCCcccccc
Confidence 9999987 88877654 245443 333221 11 123456667765443221
Q ss_pred -ECCEeEEEEEecCCCCCcC
Q 048438 220 -LGGIYAIRFATGATLTEER 238 (239)
Q Consensus 220 -~~g~~~lR~~~~~~~t~~~ 238 (239)
..+...+|++++..+|.+|
T Consensus 342 ~~~~~~~lRis~~~~~t~~d 361 (379)
T 3ke3_A 342 EPDNFKTFRLGLFGLDKLTD 361 (379)
T ss_dssp CCTTCCEEEEECCSHHHHTC
T ss_pred ccCcCCEEEEeCCcCCCHHH
Confidence 1125689999988776654
No 26
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=99.77 E-value=6.9e-18 Score=145.21 Aligned_cols=203 Identities=15% Similarity=0.145 Sum_probs=132.9
Q ss_pred ccEEEEEecCCCCcccccChhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCcccceEE
Q 048438 4 IPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCL 83 (239)
Q Consensus 4 ~p~~vv~t~gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l 83 (239)
.+.+|+++..+|.+|.+.|+++|.++|++||+++++|++|+.+..+++ ...+ ++|+++.++||++ +|.|+|++
T Consensus 164 ~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~g~~~~~-----~~~~-~~d~~~~s~~K~~-g~~G~G~~ 236 (406)
T 1kmj_A 164 KTRLLAITHVSNVLGTENPLAEMITLAHQHGAKVLVDGAQAVMHHPVD-----VQAL-DCDFYVFSGHKLY-GPTGIGIL 236 (406)
T ss_dssp TEEEEEEESBCTTTCCBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCC-----HHHH-TCSEEEEEGGGTT-SCTTCEEE
T ss_pred CCeEEEEeCCCccccCcCCHHHHHHHHHHcCCEEEEEchhhcCCCCCc-----cccc-CCCEEEEEchhcc-CCCCcEEE
Confidence 467888899999999999999999999999999999999998765443 2222 3899999999987 78889999
Q ss_pred EeeCcccccccccC--CCCccC-----------CCCceecCCCC-CC-hHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH
Q 048438 84 WATNPEYLKNKATE--SKPVVD-----------YKDWQITLSRS-FR-SLKLWFVIRNYGMENLRHFLRSHVNMARLFER 148 (239)
Q Consensus 84 ~~~~~~~l~~~~~~--~~~~~~-----------~~~~~~~~~~~-~~-~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~ 148 (239)
+++ ++.+...... .+...+ ...+.+..+.. .. .+++..+++.+...++++..++..++++++.+
T Consensus 237 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~ 315 (406)
T 1kmj_A 237 YVK-EALLQEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSALGLNNIAEYEQNLMHYALS 315 (406)
T ss_dssp EEC-HHHHHHCCCSSCSTTSEEEEETTTEEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred EEe-HHHHhhcCCcccCCCceeecccccccccCCCchhccCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHH
Confidence 985 3333222110 000000 00011111221 11 12232445555444666777888899999999
Q ss_pred HHhCCCCeEEEcCC-CeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhcCcEEEEEEE--------
Q 048438 149 LVSGDKRFEVVFPC-HFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINASGKAYMTNVV-------- 219 (239)
Q Consensus 149 ~l~~~~g~~~~~~~-~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~-------- 219 (239)
.|++++|++++.+. ..++++|.+++.. ...+.+.|.++|........
T Consensus 316 ~L~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~l~~~gi~v~~g~~~~~~~~~~ 371 (406)
T 1kmj_A 316 QLESVPDLTLYGPQNRLGVIAFNLGKHH------------------------AYDVGSFLDNYGIAVRTGHHCAMPLMAY 371 (406)
T ss_dssp HHTTSTTEEEESCTTCCSEEEEEETTCC------------------------HHHHHHHHHHTTEECEEECTTCHHHHHH
T ss_pred HHhcCCCeEEecCCCcCCEEEEEECCCC------------------------HHHHHHHHhhCCcEEEeccccchHHHHh
Confidence 99998899988653 6789999875321 11455667667665443321
Q ss_pred ECCEeEEEEEecCCCCCcC
Q 048438 220 LGGIYAIRFATGATLTEER 238 (239)
Q Consensus 220 ~~g~~~lR~~~~~~~t~~~ 238 (239)
.....++|++++..+|.+|
T Consensus 372 ~g~~~~iRis~~~~~t~~~ 390 (406)
T 1kmj_A 372 YNVPAMCRASLAMYNTHEE 390 (406)
T ss_dssp TTCSCEEEEECCTTCCHHH
T ss_pred cCCCCeEEEEeecCCCHHH
Confidence 1124789999887766553
No 27
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=99.76 E-value=4.1e-18 Score=145.61 Aligned_cols=201 Identities=14% Similarity=0.101 Sum_probs=135.4
Q ss_pred ccEEEEEecCCCCcccccChhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCcccceEE
Q 048438 4 IPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCL 83 (239)
Q Consensus 4 ~p~~vv~t~gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l 83 (239)
.+.+|+++..+|.+|.+.|+++|.++|++||+++++|++|+.+..+.+ .... ++|++++++||++++|.|+|++
T Consensus 127 ~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~-----~~~~-~~d~~~~s~~K~~~~~~g~g~~ 200 (384)
T 3zrp_A 127 EYKLVALTHVETSTGVREPVKDVINKIRKYVELIVVDGVSSVGAEEVK-----AEEW-NVDVYLTASQKALGSAAGLGLL 200 (384)
T ss_dssp CEEEEEEESEETTTTEECCHHHHHHHHGGGEEEEEEECTTTTTTSCCC-----TTTT-TCSEEEEETTSTTCCCSSEEEE
T ss_pred CCcEEEEeCCCCCCceECcHHHHHHHHHhcCCEEEEECcccccCcccc-----cccc-CCCEEEecCcccccCCCceEEE
Confidence 367888899999999999999999999999999999999998776544 2222 4899999999999999999999
Q ss_pred EeeCccccccc-cc--CCCCccCCCCce-----ec--CCCCC------ChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Q 048438 84 WATNPEYLKNK-AT--ESKPVVDYKDWQ-----IT--LSRSF------RSLKLWFVIRNYGMENLRHFLRSHVNMARLFE 147 (239)
Q Consensus 84 ~~~~~~~l~~~-~~--~~~~~~~~~~~~-----~~--~~~~~------~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~ 147 (239)
++++ +.+... .. ....+.+...+. ++ ...++ ....+..+++.+...+++++.++..++++++.
T Consensus 201 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~ 279 (384)
T 3zrp_A 201 LLSP-KALSILDSQNSIAGYYLDLRNWLPVMRGAEEGKAAYFATPPVHVILQLAEAFRLIEKEGIENRIKRHTMVASAIR 279 (384)
T ss_dssp EECH-HHHHHHHHCCCSCCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred EECH-HHHHHhcCCCCCCcccccHHHHHHHHHhhcccCCCcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 8854 332222 10 000111100000 00 11111 22334455665555567888888999999999
Q ss_pred HHHhCCCCeEEEcCC----CeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhcCcEEEEEEEECCE
Q 048438 148 RLVSGDKRFEVVFPC----HFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINASGKAYMTNVVLGGI 223 (239)
Q Consensus 148 ~~l~~~~g~~~~~~~----~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~ 223 (239)
+.|+++ |++++.++ ..++++|.+++.. ...+.+.|.++|........ ...
T Consensus 280 ~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~l~~~gi~v~~g~~-~~~ 333 (384)
T 3zrp_A 280 AGLEAL-GLEIVARRPESYSNTVTGVILKVAD------------------------PQKVLAGTVNEGVEFAPGVH-PAF 333 (384)
T ss_dssp HHHHHT-TCCBSCSSGGGBCSSEEEEECSSSC------------------------HHHHHHHHHTTTCCCEECCC-TTC
T ss_pred HHHHHC-CCeEccCcccccCccEEEEECCCCC------------------------HHHHHHHHHHCCEEEecCCC-CCc
Confidence 999998 88877654 3567888886521 12566777777655443211 111
Q ss_pred eEEEEEecCCCCCc
Q 048438 224 YAIRFATGATLTEE 237 (239)
Q Consensus 224 ~~lR~~~~~~~t~~ 237 (239)
.++|+++...+|.+
T Consensus 334 ~~iRi~~~~~~~~e 347 (384)
T 3zrp_A 334 KYFRIGHMGWVTPN 347 (384)
T ss_dssp CEEEEECCSSCCHH
T ss_pred CEEEEeccccCCHH
Confidence 78999988876654
No 28
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=99.76 E-value=6.8e-18 Score=146.13 Aligned_cols=192 Identities=12% Similarity=0.119 Sum_probs=128.6
Q ss_pred ccEEEEEecCCCCcccccChhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCcccc-eE
Q 048438 4 IPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATLDC-CC 82 (239)
Q Consensus 4 ~p~~vv~t~gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~-g~ 82 (239)
.+.+|++++.+|.+|.+.|+++|.++|++||+++|+|+||+.+..+.+ +..+ ++|++++++||+++++.++ |+
T Consensus 165 ~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~-----~~~~-~~d~~~~s~~K~l~~g~~~~g~ 238 (416)
T 1qz9_A 165 DTAVVMLTHVNYKTGYMHDMQALTALSHECGALAIWDLAHSAGAVPVD-----LHQA-GADYAIGCTYKYLNGGPGSQAF 238 (416)
T ss_dssp TEEEEEEESBCTTTCBBCCHHHHHHHHHHHTCEEEEECTTTTTTSCCC-----HHHH-TCSEEEECSSSTTCCCTTCCCE
T ss_pred CceEEEEeccccCcccccCHHHHHHHHHHcCCEEEEEccccccCcCCC-----hhhc-CCCEEEecCcccCCCCCCCeEE
Confidence 467889999999999999999999999999999999999997765443 2222 3899999999999877787 99
Q ss_pred EEeeCcccccccccCCCC---c---cCCC-Cc-------eecCCCC-C-ChHHHHHHHHHhCHHHHHHHHHHHHHHHHHH
Q 048438 83 LWATNPEYLKNKATESKP---V---VDYK-DW-------QITLSRS-F-RSLKLWFVIRNYGMENLRHFLRSHVNMARLF 146 (239)
Q Consensus 83 l~~~~~~~l~~~~~~~~~---~---~~~~-~~-------~~~~~~~-~-~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l 146 (239)
+++++ +++........+ . ++.. .+ ....+.. . ..+.+..+++.+..+++++..++..++++++
T Consensus 239 l~~~~-~~~~~l~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l 317 (416)
T 1qz9_A 239 VWVSP-QLCDLVPQPLSGWFGHSRQFAMEPRYEPSNGIARYLCGTQPITSLAMVECGLDVFAQTDMASLRRKSLALTDLF 317 (416)
T ss_dssp EEECT-TTTTTSCCSCCCGGGBCTTSCCCSSCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHH
T ss_pred EEECH-HHHhccCCCccccCccccccCCCCccCCCcchHHhcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 98864 332222110000 0 0000 01 1111111 1 1233445666655456778888888999999
Q ss_pred HHHHhCC-C--CeEEEcCC----CeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhcCcEEEEEEE
Q 048438 147 ERLVSGD-K--RFEVVFPC----HFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINASGKAYMTNVV 219 (239)
Q Consensus 147 ~~~l~~~-~--g~~~~~~~----~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~ 219 (239)
.+.|++. + |++++.+. ..++++|.+++ ...+.+.|.++|.. +.
T Consensus 318 ~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~l~~~l~~~gi~-~~--- 367 (416)
T 1qz9_A 318 IELVEQRCAAHELTLVTPREHAKRGSHVSFEHPE--------------------------GYAVIQALIDRGVI-GD--- 367 (416)
T ss_dssp HHHHHHHHTTSCCEECSCSSGGGBCSEEEEECTT--------------------------HHHHHHHHHTTTEE-CE---
T ss_pred HHHHHhhccCCCeEEeCCCCHHHcCCEEEEecCC--------------------------HHHHHHHHHhCCcE-ec---
Confidence 9999885 6 89887653 36788887642 12566677777644 32
Q ss_pred ECCEeEEEEEecC
Q 048438 220 LGGIYAIRFATGA 232 (239)
Q Consensus 220 ~~g~~~lR~~~~~ 232 (239)
..+..++|+++..
T Consensus 368 ~~~~~~lRis~~~ 380 (416)
T 1qz9_A 368 YREPRIMRFGFTP 380 (416)
T ss_dssp EETTTEEEEECCT
T ss_pred cCCCCeEEEeCcc
Confidence 2355689999875
No 29
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=99.76 E-value=2.1e-18 Score=147.56 Aligned_cols=203 Identities=15% Similarity=0.069 Sum_probs=133.1
Q ss_pred ccEEEEEecCCCCcccccChhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCcccceEE
Q 048438 4 IPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCL 83 (239)
Q Consensus 4 ~p~~vv~t~gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l 83 (239)
.+.+|++++.+|.+|.+.|+++|.++|++||+++++|++|+.+..+.+ +... ++|++++++||++++|.|+|++
T Consensus 146 ~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~-----~~~~-~~di~~~s~sK~~~~~~g~G~~ 219 (386)
T 2dr1_A 146 DVEAVTITYNETSTGVLNPLPELAKVAKEHDKLVFVDAVSAMGGADIK-----FDKW-GLDVVFSSSQKAFGVPPGLAIG 219 (386)
T ss_dssp TCCEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTBTTBCCC-----TTTT-TCSEEEEETTSTTCCCSSCEEE
T ss_pred CCcEEEEEeecCCcchhCCHHHHHHHHHHcCCeEEEEccccccCcccc-----cccc-CCcEEEEeccccccCCCceEEE
Confidence 466788888899999999999999999999999999999998765443 2222 4899999999999999889999
Q ss_pred EeeCccccccccc--CCCCccCCC----Cc---ee-cCCCC-CChHHHHHHHHHhCHH-HHHHHHHHHHHHHHHHHHHHh
Q 048438 84 WATNPEYLKNKAT--ESKPVVDYK----DW---QI-TLSRS-FRSLKLWFVIRNYGME-NLRHFLRSHVNMARLFERLVS 151 (239)
Q Consensus 84 ~~~~~~~l~~~~~--~~~~~~~~~----~~---~~-~~~~~-~~~~~~~~~l~~~g~~-g~~~~~~~~~~la~~l~~~l~ 151 (239)
++++ +.+..... ..+.+.+.. .. .. ..+.. .....+..+++.+... +++++.++..++++++.+.|+
T Consensus 220 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~L~ 298 (386)
T 2dr1_A 220 AFSE-RFLEIAEKMPERGWYFDIPLYVKYLKEKESTPSTPPMPQVFGINVALRIIEKMGGKEKWLEMYEKRAKMVREGVR 298 (386)
T ss_dssp EECH-HHHHHHTTCTTCCSTTCHHHHHHHHHHHSSCSSCCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred EECH-HHHHHHhcCCCCceEEeHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 9854 33322210 000111100 00 00 11111 1123344455554333 567788888899999999999
Q ss_pred CCCCeEEEcCC---CeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhcCcEEEEEEEECCEeEEEE
Q 048438 152 GDKRFEVVFPC---HFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINASGKAYMTNVVLGGIYAIRF 228 (239)
Q Consensus 152 ~~~g~~~~~~~---~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~ 228 (239)
+. |+++..+. ..++++|.++... + ...+.++|.++|..........+..++|+
T Consensus 299 ~~-g~~~~~~~~~~~~~~~~~~~~~~~----------------~-------~~~~~~~l~~~gi~v~~~~~~~~~~~iRi 354 (386)
T 2dr1_A 299 EI-GLDILAEPGHESPTITAVLTPPGI----------------K-------GDEVYEAMRKRGFELAKGYGSVKEKTFRI 354 (386)
T ss_dssp HT-TCCBSSCTTCBCSSEEEEECCTTC----------------C-------HHHHHHHHHHTTEECEECCGGGTTTEEEE
T ss_pred Hc-CCeeCcCccccCCceEEEEcCCCC----------------C-------HHHHHHHHHHCCeEEecCccccCCCEEEE
Confidence 87 88876543 3678888886321 0 12566777777654443222223468999
Q ss_pred EecCCCCCc
Q 048438 229 ATGATLTEE 237 (239)
Q Consensus 229 ~~~~~~t~~ 237 (239)
+++..+|.+
T Consensus 355 ~~~~~~~~~ 363 (386)
T 2dr1_A 355 GHMGYMKFE 363 (386)
T ss_dssp ECCSSCCHH
T ss_pred ECCCCCCHH
Confidence 988766654
No 30
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=99.76 E-value=1.8e-18 Score=148.33 Aligned_cols=202 Identities=10% Similarity=0.058 Sum_probs=130.0
Q ss_pred ccEEEEEecCCCCcccccChhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCcccceEE
Q 048438 4 IPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCL 83 (239)
Q Consensus 4 ~p~~vv~t~gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l 83 (239)
.+.+|+++..+|.+|.+.|+++|.++|++||+++++|++|+.+..+.+ .... ++|++++++||++++|.|+|++
T Consensus 148 ~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~g~~~~~-----~~~~-~~d~~~~s~sK~~~~~~g~g~~ 221 (393)
T 3kgw_A 148 KPVLLFLVHGESSTGVVQPLDGFGELCHRYQCLLLVDSVASLGGVPIY-----MDQQ-GIDIMYSSSQKVLNAPPGISLI 221 (393)
T ss_dssp CCSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTTTTTSCCC-----TTTT-TCCEEEEESSSTTCCCSSCEEE
T ss_pred CCcEEEEeccCCcchhhccHHHHHHHHHHcCCEEEEECCccccCcccc-----hhhc-CCCEEEecCcccccCCCceeEE
Confidence 355778888899999999999999999999999999999987655543 2222 4899999999999999999999
Q ss_pred EeeCccccccccc---CC-CCccCCC---------C-ceecCCC-C-CChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Q 048438 84 WATNPEYLKNKAT---ES-KPVVDYK---------D-WQITLSR-S-FRSLKLWFVIRNYGMENLRHFLRSHVNMARLFE 147 (239)
Q Consensus 84 ~~~~~~~l~~~~~---~~-~~~~~~~---------~-~~~~~~~-~-~~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~ 147 (239)
++++ +.+..... .. ..+.+.. . .....+. . .....+..+++.+..+++++..++..++++++.
T Consensus 222 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~ 300 (393)
T 3kgw_A 222 SFND-KAKYKVYSRKTKPVSFYTDITYLAKLWGCEGETRVIHHTTPVTSLYCLRESLALIAEQGLENCWRRHREATAHLH 300 (393)
T ss_dssp EECH-HHHHHHHTCSSCCSCSTTCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred EECH-HHHHHHhccCCCCCceeecHHHHHHhhhhccccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 9853 32221111 00 0000000 0 0000111 1 112334445555555567888889999999999
Q ss_pred HHHhCCCCeEEEcCC---C-eeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhc-CcEEEEEEEECC
Q 048438 148 RLVSGDKRFEVVFPC---H-FAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINAS-GKAYMTNVVLGG 222 (239)
Q Consensus 148 ~~l~~~~g~~~~~~~---~-~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~g 222 (239)
+.|+++ |++++.+. . ..+++|.++... + ...+.+.|.++ |..+.......+
T Consensus 301 ~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~----------------~-------~~~~~~~l~~~~gi~v~~g~~~~~ 356 (393)
T 3kgw_A 301 KHLQEM-GLKFFVKDPEIRLPTITTVTVPAGY----------------N-------WRDIVSYVLDHFSIEISGGLGPTE 356 (393)
T ss_dssp HHHHHT-TCCBSSSSGGGBCSSEEEEECCTTB----------------C-------HHHHHHHHHHHHCEECBCCCGGGT
T ss_pred HHHHHc-CCeeccCChhhcCCeEEEEeCCCCC----------------C-------HHHHHHHHHHhCCEEEeCCcccCC
Confidence 999998 88876432 2 356678775321 0 12566677666 554443222224
Q ss_pred EeEEEEEecCCCCC
Q 048438 223 IYAIRFATGATLTE 236 (239)
Q Consensus 223 ~~~lR~~~~~~~t~ 236 (239)
..++|++++.+.++
T Consensus 357 ~~~iRi~~~~~~~~ 370 (393)
T 3kgw_A 357 ERVLRIGLLGYNAT 370 (393)
T ss_dssp TTEEEEECCGGGCC
T ss_pred CCEEEEEecccCCC
Confidence 56899998666543
No 31
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=99.75 E-value=2.6e-18 Score=147.54 Aligned_cols=202 Identities=12% Similarity=0.067 Sum_probs=130.9
Q ss_pred ccEEEEEecCCCCcccccChhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCcccceEE
Q 048438 4 IPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCL 83 (239)
Q Consensus 4 ~p~~vv~t~gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l 83 (239)
.|.+|++++.+|.+|.+.|+++|.++|++||+++|+|++|+.+..+.+ +..+ ++|++++++|||+++|.|+|++
T Consensus 134 ~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~-----~~~~-~~d~~~~s~sK~~~~~~g~G~l 207 (392)
T 2z9v_A 134 EITVVSVCHHDTPSGTINPIDAIGALVSAHGAYLIVDAVSSFGGMKTH-----PEDC-KADIYVTGPNKCLGAPPGLTMM 207 (392)
T ss_dssp TCCEEEEESEEGGGTEECCHHHHHHHHHHTTCEEEEECTTTBTTBSCC-----GGGG-TCSEEEECSSSTTCCCSCCEEE
T ss_pred CCcEEEEeccCCCCceeccHHHHHHHHHHcCCeEEEEcccccCCcccc-----cccc-cceEEEecCcccccCCCceeEE
Confidence 456788899999999999999999999999999999999997766543 2222 3899999999999999999999
Q ss_pred EeeCcccccccccC---CC-CccCC----CCc---eecCCC-CC-ChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHH
Q 048438 84 WATNPEYLKNKATE---SK-PVVDY----KDW---QITLSR-SF-RSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLV 150 (239)
Q Consensus 84 ~~~~~~~l~~~~~~---~~-~~~~~----~~~---~~~~~~-~~-~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l 150 (239)
++++ +.+...... .+ ...+. ..+ ....+. .. ..+.+..+++.+...++++..++..++++++.+.|
T Consensus 208 ~~~~-~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L 286 (392)
T 2z9v_A 208 GVSE-RAWAKMKANPLAPRASMLSIVDWENAWSRDKPFPFTPSVSEINGLDVALDLYLNEGPEAVWARHALTAKAMRAGV 286 (392)
T ss_dssp EECH-HHHHHHHTCTTSCCSSTTCSGGGTTTTSTTSCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
T ss_pred EECH-HHHHHhhhccCCCCceeccHHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Confidence 9854 332211100 00 01110 000 011111 11 11233445555444457778888889999999999
Q ss_pred hCCCCeEEEcCC----CeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhc-CcEEEEEEEECCEeE
Q 048438 151 SGDKRFEVVFPC----HFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINAS-GKAYMTNVVLGGIYA 225 (239)
Q Consensus 151 ~~~~g~~~~~~~----~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~g~~~ 225 (239)
+++ |++++.++ ..++++|+++... + ...+.+.|.++ |..........+..+
T Consensus 287 ~~~-g~~~~~~~~~~~~~~~~~~~~~~~~----------------~-------~~~l~~~L~~~~gi~v~~g~~~~~~~~ 342 (392)
T 2z9v_A 287 TAM-GLSVWAASDSIASPTTTAVRTPDGV----------------D-------EKALRQAARARYGVVFSSGRGETLGKL 342 (392)
T ss_dssp HHT-TCCBSSSSGGGBCTTEEEEECCTTC----------------C-------HHHHHHHHHHHHCEECEECCGGGTTTE
T ss_pred HHc-CCeeccCCccccCCceEEEECCCCC----------------C-------HHHHHHHHHhcCCEEEecCCCCCCCCe
Confidence 987 88877633 3578888885311 0 12566677766 655443322224568
Q ss_pred EEEEecC-CCCC
Q 048438 226 IRFATGA-TLTE 236 (239)
Q Consensus 226 lR~~~~~-~~t~ 236 (239)
+|++++. .+|.
T Consensus 343 lRi~~~~~~~~~ 354 (392)
T 2z9v_A 343 TRIGHMGPTAQP 354 (392)
T ss_dssp EEEECCGGGCSH
T ss_pred EEEeCcccccCH
Confidence 9999766 4443
No 32
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=99.75 E-value=1.5e-18 Score=149.17 Aligned_cols=203 Identities=13% Similarity=0.016 Sum_probs=128.9
Q ss_pred cEEEEEecCCCCcccccChhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCcccceEEE
Q 048438 5 PLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLW 84 (239)
Q Consensus 5 p~~vv~t~gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~ 84 (239)
+.+|++++.+|.+|.+.|+++|.++|++||+++|+|++|+.+..+.+ +... ++|++++++|||+++|.|+|+++
T Consensus 145 ~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~-----~~~~-~~d~~~~s~sK~l~g~~G~G~~~ 218 (393)
T 2huf_A 145 PSVLFLTQGDSSTGVLQGLEGVGALCHQHNCLLIVDTVASLGGAPMF-----MDRW-EIDAMYTGSQKVLGAPPGITPVS 218 (393)
T ss_dssp CSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTTBTTBCCC-----TTTT-TCSEEECCSSSTTCCCSSCEEEE
T ss_pred CcEEEEEccCCCccccCCHHHHHHHHHHcCCEEEEEcccccCCCCcc-----hhhc-CccEEEECCCcccccCCCeEEEE
Confidence 45778889999999999999999999999999999999987765443 2222 38999999999999999999998
Q ss_pred eeCcccccccccC----CCCccC-------CCC---ceecCCC-CC-ChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH
Q 048438 85 ATNPEYLKNKATE----SKPVVD-------YKD---WQITLSR-SF-RSLKLWFVIRNYGMENLRHFLRSHVNMARLFER 148 (239)
Q Consensus 85 ~~~~~~l~~~~~~----~~~~~~-------~~~---~~~~~~~-~~-~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~ 148 (239)
++ ++.+...... .+...+ +.. .....+. .. ....+..+++.+..+++++..++..++++++.+
T Consensus 219 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~ 297 (393)
T 2huf_A 219 FS-HRAVERYKRRNTKVKVYYWDMSLVGDYWGCFGRPRIYHHTISSTLLYGLREAIAMACEEGLPALIARHEDCAKRLYR 297 (393)
T ss_dssp EC-HHHHHHHHTCSSCCSCGGGCHHHHHHHTTCSSSCCCCSCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred EC-HHHHHHHhhcCCCCceEEEchHHHHhhhccccccCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Confidence 85 3333221110 000000 000 0001111 11 112233355554444577788888899999999
Q ss_pred HHhCCCCeEEEcCC--Cee-EEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhc-CcEEEEEEEECCEe
Q 048438 149 LVSGDKRFEVVFPC--HFA-VVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINAS-GKAYMTNVVLGGIY 224 (239)
Q Consensus 149 ~l~~~~g~~~~~~~--~~~-iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~g~~ 224 (239)
.|+++ |++++.++ ..+ +++|+++... + ...+.++|.++ |..........+..
T Consensus 298 ~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~----------------~-------~~~~~~~L~~~~gi~v~~g~~~~~~~ 353 (393)
T 2huf_A 298 GLQDA-GFELYADPKDRLSTVTTIKVPQGV----------------D-------WLKAAQYAMKTYLVEISGGLGPTAGQ 353 (393)
T ss_dssp HHHHT-TCCBSSCGGGBCTTEEEEECCTTC----------------C-------HHHHHHHHHHHHCEECBCCCGGGTTT
T ss_pred HHHHc-CCeeccCccccCCcEEEEEcCCCC----------------C-------HHHHHHHHHHhCCEEEecCcccccCC
Confidence 99987 88876543 234 8888875311 0 12456666654 54433221112356
Q ss_pred EEEEEecCCCCCcC
Q 048438 225 AIRFATGATLTEER 238 (239)
Q Consensus 225 ~lR~~~~~~~t~~~ 238 (239)
++|++++.+++++|
T Consensus 354 ~~Ri~~~~~~~~~e 367 (393)
T 2huf_A 354 VFRIGLMGQNATTE 367 (393)
T ss_dssp EEEEECCGGGCSHH
T ss_pred EEEEEcccCcCCHH
Confidence 89999877765443
No 33
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=99.75 E-value=1.9e-17 Score=140.41 Aligned_cols=202 Identities=12% Similarity=0.098 Sum_probs=130.6
Q ss_pred cEEEEEecCCCCcccccChhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCcccceEEE
Q 048438 5 PLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLW 84 (239)
Q Consensus 5 p~~vv~t~gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~ 84 (239)
+.+|+.+..+|.+|.+.|+++|.++|++||+++++|++|+.+..+.+ +... ++|++++++|||+++|.|+|+++
T Consensus 132 ~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~-----~~~~-~~di~~~s~~K~~~~~~g~G~~~ 205 (366)
T 1m32_A 132 ISHIAMVHSETTTGMLNPIDEVGALAHRYGKTYIVDAMSSFGGIPMD-----IAAL-HIDYLISSANKCIQGVPGFAFVI 205 (366)
T ss_dssp CCEEEEESEETTTTEECCHHHHHHHHHHHTCEEEEECTTTTTTSCCC-----TTTT-TCSEEEEESSSTTCCCSSEEEEE
T ss_pred eEEEEEecccCCcceecCHHHHHHHHHHcCCEEEEECCccccCcCcc-----cccc-CccEEEecCcccccCCCceEEEE
Confidence 55677888889999999999999999999999999999987765443 2222 38999999999998999999999
Q ss_pred eeCcccccccccC-CCCccCCC-Cce---ec-CCCCC--C---hHHHHHHHHHhCHHH-HHHHHHHHHHHHHHHHHHHhC
Q 048438 85 ATNPEYLKNKATE-SKPVVDYK-DWQ---IT-LSRSF--R---SLKLWFVIRNYGMEN-LRHFLRSHVNMARLFERLVSG 152 (239)
Q Consensus 85 ~~~~~~l~~~~~~-~~~~~~~~-~~~---~~-~~~~~--~---~~~~~~~l~~~g~~g-~~~~~~~~~~la~~l~~~l~~ 152 (239)
+++ +.+...... .....+.. .+. .. ..+++ . ...+..+++.+...+ +++..++..++++++.+.|++
T Consensus 206 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~ 284 (366)
T 1m32_A 206 ARE-QKLAACKGHSRSLSLDLYAQWRCMEDNHGKWRFTSPTHTVLAFAQALKELAKEGGVAARHQRYQQNQRSLVAGMRA 284 (366)
T ss_dssp EEH-HHHTTCTTCCSCSTTCHHHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ECH-HHHHhhcCCCCCccccHHHHHhhhcccCCCCCCCCCHHHHHHHHHHHHHHHHccCHhHHHHHHHHHHHHHHHHHHH
Confidence 864 333222110 00011000 000 00 11111 1 123344555544444 677888889999999999998
Q ss_pred CCCeEEEcCC--Cee-EEEEEEcCC-CcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhcCcEEEEEEEECCEeEEEE
Q 048438 153 DKRFEVVFPC--HFA-VVCFRVSPL-PVLMDKLKTKYENCLLSEEEQINEFNRELLESINASGKAYMTNVVLGGIYAIRF 228 (239)
Q Consensus 153 ~~g~~~~~~~--~~~-iv~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~ 228 (239)
. |++++.++ ..+ ++.|.+++. +. + ...+.+.|.++|.. +.+....+..++|+
T Consensus 285 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~-------~~~~~~~l~~~gi~-v~~~~~~~~~~iRi 340 (366)
T 1m32_A 285 L-GFNTLLDDELHSPIITAFYSPEDPQY---------------R-------FSEFYRRLKEQGFV-IYPGKVSQSDCFRI 340 (366)
T ss_dssp T-TCCBSSCGGGBCSSEEEEECCCCTTC---------------C-------HHHHHHHHHHTTEE-CEECCCSSSCEEEE
T ss_pred C-CCeeccCchhcCceEEEEEcCccCCC---------------C-------HHHHHHHHHHCCEE-EECCcCCCCCEEEE
Confidence 7 88776542 344 888887631 11 0 12566677777644 33322224578999
Q ss_pred EecCCCCCc
Q 048438 229 ATGATLTEE 237 (239)
Q Consensus 229 ~~~~~~t~~ 237 (239)
+++..+|.+
T Consensus 341 ~~~~~~~~~ 349 (366)
T 1m32_A 341 GNIGEVYAA 349 (366)
T ss_dssp ECCSSCCHH
T ss_pred ecCCCCCHH
Confidence 988776654
No 34
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=99.75 E-value=2.2e-17 Score=142.73 Aligned_cols=202 Identities=15% Similarity=0.137 Sum_probs=131.4
Q ss_pred ccEEEEEecCCCCcccccChhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCcccceEE
Q 048438 4 IPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCL 83 (239)
Q Consensus 4 ~p~~vv~t~gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l 83 (239)
.+.+|++++.+|.+|.+.|+++|.++|++||+++++|++|+.+..+.+ ...+ ++|++++++|| +++|.|+|++
T Consensus 169 ~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~-----~~~~-~~di~~~s~sK-~~~~~g~G~~ 241 (420)
T 1t3i_A 169 KTKLVTVVHISNTLGCVNPAEEIAQLAHQAGAKVLVDACQSAPHYPLD-----VQLI-DCDWLVASGHK-MCAPTGIGFL 241 (420)
T ss_dssp TEEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCC-----HHHH-TCSEEEEEGGG-TTSCTTCEEE
T ss_pred CceEEEEeCCcccccCcCCHHHHHHHHHHcCCEEEEEhhhccCCccCc-----hhhc-CCCEEEEehhh-hcCCCceEEE
Confidence 367888899999999999999999999999999999999998765432 1222 38999999999 5678889988
Q ss_pred EeeCcccccccccC--CCCcc-----C-----CCCceecCCCC-C-ChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH
Q 048438 84 WATNPEYLKNKATE--SKPVV-----D-----YKDWQITLSRS-F-RSLKLWFVIRNYGMENLRHFLRSHVNMARLFERL 149 (239)
Q Consensus 84 ~~~~~~~l~~~~~~--~~~~~-----~-----~~~~~~~~~~~-~-~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~ 149 (239)
+++ ++.+...... .+... . ...+.+..+.. . ..+.+..+++.+...+++++.++..++++++.+.
T Consensus 242 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~ 320 (420)
T 1t3i_A 242 YGK-EEILEAMPPFFGGGEMIAEVFFDHFTTGELPHKFEAGTPAIAEAIALGAAVDYLTDLGMENIHNYEVELTHYLWQG 320 (420)
T ss_dssp EEC-HHHHHHSCCCSCSTTSEEEECSSCEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
T ss_pred EEc-hHHHhhcCceecCCCccccccccccCCCCchhhccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 875 3332222110 00000 0 00011111221 1 1123333555554445677888888999999999
Q ss_pred HhCCCCeEEEcCC-----CeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhcCcEEEEEE------
Q 048438 150 VSGDKRFEVVFPC-----HFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINASGKAYMTNV------ 218 (239)
Q Consensus 150 l~~~~g~~~~~~~-----~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~------ 218 (239)
|++++|++++.+. ..++++|.+++.. ...+.+.|.++|.......
T Consensus 321 L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~l~~~gi~v~~~~~~~~~~ 376 (420)
T 1t3i_A 321 LGQIPQLRLYGPNPKHGDRAALASFNVAGLH------------------------ASDVATMVDQDGIAIRSGHHCTQPL 376 (420)
T ss_dssp HHTCTTEEEESCCGGGSCBCSEEEEEETTBC------------------------HHHHHHHHHTTTEECBCSCTTCHHH
T ss_pred HHhCCCeEEeCCCccccccCCEEEEEECCCC------------------------HHHHHHHHHHCCeEEeeccccchHH
Confidence 9998899988764 3789999875311 1145566766665433221
Q ss_pred -EECC-EeEEEEEecCCCCCc
Q 048438 219 -VLGG-IYAIRFATGATLTEE 237 (239)
Q Consensus 219 -~~~g-~~~lR~~~~~~~t~~ 237 (239)
...| ..++|++++..+|.+
T Consensus 377 ~~~~g~~~~iRis~~~~~~~~ 397 (420)
T 1t3i_A 377 HRLFDASGSARASLYFYNTKE 397 (420)
T ss_dssp HHHTTCCCCEEEECCTTCCHH
T ss_pred HHhcCCCCeEEEecCCCCCHH
Confidence 0113 578999988666654
No 35
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=99.74 E-value=1.6e-17 Score=141.58 Aligned_cols=196 Identities=12% Similarity=0.105 Sum_probs=130.1
Q ss_pred ccEEEEEecCCCCcccccChhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCcccceEE
Q 048438 4 IPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCL 83 (239)
Q Consensus 4 ~p~~vv~t~gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l 83 (239)
.+.+|+++..+|.+|.+.|+++|.++|++||+ +|+|++|+.+..+.+ .... ++|++++++||+ ++|.|+|++
T Consensus 138 ~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~-li~D~a~~~~~~~~~-----~~~~-~~d~~~~s~~K~-~g~~g~g~~ 209 (382)
T 4hvk_A 138 DTILVSVQHANNEIGTIQPVEEISEVLAGKAA-LHIDATASVGQIEVD-----VEKI-GADMLTISSNDI-YGPKGVGAL 209 (382)
T ss_dssp TEEEEECCSBCTTTCBBCCHHHHHHHHSSSSE-EEEECTTTBTTBCCC-----HHHH-TCSEEEEESGGG-TSCTTCEEE
T ss_pred CceEEEEECCCCCceeeCCHHHHHHHHHHcCE-EEEEhHHhcCCCCCC-----chhc-CCCEEEEeHHHh-cCCCceEEE
Confidence 46788889999999999999999999999999 999999998766554 2211 389999999997 568899999
Q ss_pred EeeCcccccccccCCCCccCCCCceecCCCC--CChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEcC
Q 048438 84 WATNPEYLKNKATESKPVVDYKDWQITLSRS--FRSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSGDKRFEVVFP 161 (239)
Q Consensus 84 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~~~~~ 161 (239)
++++...+.+..... . .......+.. .....+..+++. ..++++++.++..++++++.+.|++++++++..+
T Consensus 210 ~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~al~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~ 283 (382)
T 4hvk_A 210 WIRKEAKLQPVILGG-G----QENGLRSGSENVPSIVGFGKAAEI-TAMEWREEAERLRRLRDRIIDNVLKIEESYLNGH 283 (382)
T ss_dssp EEETTCCCCCSSCSS-C----TGGGTSCSCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHTTSTTEEECSC
T ss_pred EEcCccCcCcccccC-C----CcCccccCCcCHHHHHHHHHHHHH-HHhhHHHHHHHHHHHHHHHHHHHhcCCCeEEeCC
Confidence 987643222211000 0 0001111111 111223333442 2457788889999999999999999899998765
Q ss_pred CC---eeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhcCcEEEEEEEE--C-----------C---
Q 048438 162 CH---FAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINASGKAYMTNVVL--G-----------G--- 222 (239)
Q Consensus 162 ~~---~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~--~-----------g--- 222 (239)
+. .++++|.+++.. ...+.+.|.++|......... . |
T Consensus 284 ~~~~~~~~~~~~~~~~~------------------------~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~ 339 (382)
T 4hvk_A 284 PEKRLPNNVNVRFSYIE------------------------GESIVLSLDMAGIQASTGSACSSKTLQPSHVLMACGLKH 339 (382)
T ss_dssp SSSBCTTEEEEEETTCC------------------------HHHHHHHHHHTTCBCBCC--------CCCHHHHHTTCCH
T ss_pred ccccCCCEEEEEECCCC------------------------HHHHHHHHHHCCEEEeeCCccCCCCCcchHHHHHcCCCh
Confidence 42 368899886532 114556666666553322110 0 1
Q ss_pred ---EeEEEEEecCCCCCc
Q 048438 223 ---IYAIRFATGATLTEE 237 (239)
Q Consensus 223 ---~~~lR~~~~~~~t~~ 237 (239)
..++|++++..+|.+
T Consensus 340 ~~~~~~iRl~~~~~~t~e 357 (382)
T 4hvk_A 340 EEAHGTLLLTLGRYNTDE 357 (382)
T ss_dssp HHHHTEEEEECCTTCCHH
T ss_pred hhcCCeEEEEcCCCCCHH
Confidence 468999988777654
No 36
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=99.74 E-value=5e-18 Score=145.93 Aligned_cols=203 Identities=10% Similarity=0.035 Sum_probs=132.4
Q ss_pred cEEEEEecCCCCcccccChhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCcccceEEE
Q 048438 5 PLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLW 84 (239)
Q Consensus 5 p~~vv~t~gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~ 84 (239)
+.+|+++..+|.+|.+.|+++|.++|+++|+++++|++|+.+..+.+ +... ++|+++.++||++++|.++|+++
T Consensus 160 ~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~-----~~~~-~~di~~~s~sK~l~~~~~~G~l~ 233 (393)
T 1vjo_A 160 PAILALVHAETSTGARQPLEGVGELCREFGTLLLVDTVTSLGGVPIF-----LDAW-GVDLAYSCSQKGLGCSPGASPFT 233 (393)
T ss_dssp CSEEEEESEETTTTEECCCTTHHHHHHHHTCEEEEECTTTTTTSCCC-----TTTT-TCSEEECCSSSTTCSCSSCEEEE
T ss_pred ceEEEEeccCCCcceeccHHHHHHHHHHcCCEEEEECCccccCcCCc-----cccc-CccEEEEcCcccccCCCceEEEE
Confidence 45778888899999999999999999999999999999997655443 2333 48999999999999999999999
Q ss_pred eeCcccccccccC----CCCccCC-------CCceecC-CCC-CChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHh
Q 048438 85 ATNPEYLKNKATE----SKPVVDY-------KDWQITL-SRS-FRSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVS 151 (239)
Q Consensus 85 ~~~~~~l~~~~~~----~~~~~~~-------~~~~~~~-~~~-~~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~ 151 (239)
+++ +.+...... .+...+. ....... +.. .....+..+++.+..+++++..++..++++++.+.|+
T Consensus 234 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~ 312 (393)
T 1vjo_A 234 MSS-RAIEKLQRRRTKVANWYLDMNLLGKYWGSERVYHHTAPINLYYALREALRLIAQEGLANCWQRHQKNVEYLWERLE 312 (393)
T ss_dssp ECH-HHHHHHHTCSSCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
T ss_pred ECH-HHHHHHhccCCCCCceecCcHhhhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHH
Confidence 854 333221100 0000000 0001111 111 1223344556554444567788888899999999999
Q ss_pred CCCCeEEEcCCC---eeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhc-CcEEEEEEEECCEeEEE
Q 048438 152 GDKRFEVVFPCH---FAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINAS-GKAYMTNVVLGGIYAIR 227 (239)
Q Consensus 152 ~~~g~~~~~~~~---~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~g~~~lR 227 (239)
+. |++++.+.. .++++|+++... + ...+.+.|.++ |..........+..++|
T Consensus 313 ~~-g~~~~~~~~~~~~~~~~~~~~~~~----------------~-------~~~~~~~l~~~~gi~v~~g~~~~~~~~iR 368 (393)
T 1vjo_A 313 DI-GLSLHVEKEYRLPTLTTVCIPDGV----------------D-------GKAVARRLLNEHNIEVGGGLGELAGKVWR 368 (393)
T ss_dssp HT-TCCBSSCGGGBCSSEEEEECCTTC----------------C-------HHHHHHHHHHHHCEECEECCGGGTTTEEE
T ss_pred Hc-CCcccCCccccCCcEEEEEcCCCC----------------C-------HHHHHHHHHhhCCEEEecCccccCCCEEE
Confidence 87 888765432 468888875311 0 12566777776 66554433222456899
Q ss_pred EEecCCCCCcC
Q 048438 228 FATGATLTEER 238 (239)
Q Consensus 228 ~~~~~~~t~~~ 238 (239)
+++..+.+++|
T Consensus 369 is~~~~~~~~~ 379 (393)
T 1vjo_A 369 VGLMGFNSRKE 379 (393)
T ss_dssp EECCGGGCSHH
T ss_pred EeCCccCChHH
Confidence 99777666553
No 37
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=99.74 E-value=8.1e-18 Score=143.70 Aligned_cols=203 Identities=13% Similarity=0.023 Sum_probs=130.7
Q ss_pred ccEEEEEecCCCCcccccChhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCcccceEE
Q 048438 4 IPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCL 83 (239)
Q Consensus 4 ~p~~vv~t~gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l 83 (239)
.+.+|+++..+|.+|.+.|+++|+++|++||+++++|++|+.+..+.+ .... ++|++++++||++++|.|+|++
T Consensus 144 ~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~~~~~~~-----~~~~-~~d~~~~s~~K~l~~~~G~g~~ 217 (376)
T 3f0h_A 144 NFTGLLVNVDETSTAVLYDTMMIGEFCKKNNMFFVCDCVSAFLADPFN-----MNEC-GADVMITGSQKVLACPPGISVI 217 (376)
T ss_dssp CCCEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTSCCC-----HHHH-TCSEEEEETTTTTCCCSSCEEE
T ss_pred CceEEEEecccCCcceecCHHHHHHHHHHcCCEEEEEcCccccCcccc-----cccc-CccEEEecCcccccCCCceEEE
Confidence 456788888899999999999999999999999999999998766543 2211 3899999999999989999998
Q ss_pred EeeCccccccccc--CCCCccCCCCce---ecCCCC--CCh---HHHHHHHHHhCHH-HHHHHHHHHHHHHHHHHHHHhC
Q 048438 84 WATNPEYLKNKAT--ESKPVVDYKDWQ---ITLSRS--FRS---LKLWFVIRNYGME-NLRHFLRSHVNMARLFERLVSG 152 (239)
Q Consensus 84 ~~~~~~~l~~~~~--~~~~~~~~~~~~---~~~~~~--~~~---~~~~~~l~~~g~~-g~~~~~~~~~~la~~l~~~l~~ 152 (239)
++++ +.+..... ..+.+.+...+. ...+.. ... .++..+++.+..+ +++++.++..++++++.+.|++
T Consensus 218 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 296 (376)
T 3f0h_A 218 VLAP-RGVERVEKSKVRTMYFDLKDALKNQERGQTPFTPAVGILLQINERLKEIKKHGGADAEVARIASQAADFRAKIKD 296 (376)
T ss_dssp EECH-HHHHHHHTCCCCCSTTCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTT
T ss_pred EECH-HHHHHhhcCCCCceeecHHHHHhhcccCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH
Confidence 8753 33222111 000011100000 001111 111 3344556655555 6788888899999999999998
Q ss_pred CCCeEEEcCCCee-EEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhc-CcEEEEEEEECCEeEEEEEe
Q 048438 153 DKRFEVVFPCHFA-VVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINAS-GKAYMTNVVLGGIYAIRFAT 230 (239)
Q Consensus 153 ~~g~~~~~~~~~~-iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~g~~~lR~~~ 230 (239)
+ ++++..+...+ ++.+...+.. ...+.+.|.++ |..+.......+..++|+++
T Consensus 297 ~-~~~~~~~~~~~~~~~~~~~~~~------------------------~~~l~~~l~~~~gi~v~~g~~~~~~~~lRis~ 351 (376)
T 3f0h_A 297 L-PFELVSESPANGVTSVHPTTAN------------------------AYDIFLKLKDEYGIWICPNGGEMKDTIFRVGH 351 (376)
T ss_dssp S-SEEECCSSBBTTEEEEEESSSC------------------------HHHHHHHHHHHSSEECEECCGGGTTTCEEEEC
T ss_pred c-CCccCccccCceEEEEeCCCCC------------------------HHHHHHHHHHhCCEEEecCccccCCCEEEEec
Confidence 7 78877554333 4444432211 12566777777 55444332222456899998
Q ss_pred cCCCCCcC
Q 048438 231 GATLTEER 238 (239)
Q Consensus 231 ~~~~t~~~ 238 (239)
+...|.+|
T Consensus 352 ~~~~t~e~ 359 (376)
T 3f0h_A 352 IGALTHED 359 (376)
T ss_dssp CSSCCHHH
T ss_pred CCCCCHHH
Confidence 87766543
No 38
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=99.73 E-value=2.2e-18 Score=149.11 Aligned_cols=145 Identities=13% Similarity=0.145 Sum_probs=108.8
Q ss_pred cEEEEEecCCCC-cccccChhHHHHHHHHhCCEEEEecccccccccCcccc-cccCCCCCcceEEEcCcccCCCcccceE
Q 048438 5 PLFLCATIGTTA-ITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFR-HFIDGVEGADSFSLNAHKWFFATLDCCC 82 (239)
Q Consensus 5 p~~vv~t~gtt~-~G~i~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~-~~~~~~~~~Ds~~~~~hK~l~~P~g~g~ 82 (239)
.+++|++.-++. .+..+||++|+++||+||+++|||.|||+...++++.. ..++ +.++|+++.|+||++.+|.|+++
T Consensus 216 ~i~~V~~Ttt~y~p~~~ddI~eIaeIch~~gIpllVDeAhGah~~~~~~lp~sA~~-~GrAD~vVqS~HK~llvpIGG~i 294 (501)
T 3hl2_A 216 CILCIHSTTSCFAPRVPDRLEELAVICANYDIPHIVNNAYGVQSSKCMHLIQQGAR-VGRIDAFVQSLDKNFMVPVGGAI 294 (501)
T ss_dssp GEEEEEEECSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTCTTCHHHHHHHHHHHH-HSCCCEEEEEHHHHHCCCSSCEE
T ss_pred cEEEEEecCCCCCCcccccHHHHHHHHHHcCCeEEEeCcchhhhhhhhhhHHHHHh-cCCCcEEEecccccceeecCceE
Confidence 455555544444 45779999999999999999999999998764443211 1111 22499999999999999999988
Q ss_pred EEeeCcccccccccCCCCccCCCCceecCCCC--CChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCCC---CeE
Q 048438 83 LWATNPEYLKNKATESKPVVDYKDWQITLSRS--FRSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSGDK---RFE 157 (239)
Q Consensus 83 l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~---g~~ 157 (239)
+++++++++...... ..+|+ +.++.+|.++..+|.+|+++.+++..+++++|+++|+++. |-+
T Consensus 295 i~~~d~e~l~~~~~~------------yPGr~S~Spsldl~~tLL~lGr~Gy~~ll~e~~ela~~L~~~L~~la~~~ge~ 362 (501)
T 3hl2_A 295 IAGFNDSFIQEISKM------------YPGRASASPSLDVLITLLSLGSNGYKKLLKERKEMFSYLSNQIKKLSEAYNER 362 (501)
T ss_dssp EEESCHHHHHHHHHT------------SCSCBCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCC
T ss_pred EEeCCHHHHHHHHHh------------CCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChh
Confidence 888887766554321 11333 5568899999999999999999999999999999998752 455
Q ss_pred EEcCC
Q 048438 158 VVFPC 162 (239)
Q Consensus 158 ~~~~~ 162 (239)
++..+
T Consensus 363 ll~~~ 367 (501)
T 3hl2_A 363 LLHTP 367 (501)
T ss_dssp BCCCT
T ss_pred hcCCC
Confidence 55433
No 39
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=99.72 E-value=5.8e-17 Score=139.83 Aligned_cols=200 Identities=14% Similarity=0.126 Sum_probs=127.0
Q ss_pred ccEEEEEecCCCCcccccChhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCcccce-E
Q 048438 4 IPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATLDCC-C 82 (239)
Q Consensus 4 ~p~~vv~t~gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g-~ 82 (239)
.+.+|++++.+|.+|.+.|+++|.++|+++|+++|+|+||+.+..+.+ +..+ ++|++++++||++ +|. +| +
T Consensus 165 ~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~-----~~~~-~~d~~~~s~~K~~-g~~-~G~~ 236 (406)
T 3cai_A 165 STRLVAVNSASGTLGGVTDLRAMTKLVHDVGALVVVDHSAAAPYRLLD-----IRET-DADVVTVNAHAWG-GPP-IGAM 236 (406)
T ss_dssp TEEEEEEESBCTTTCBBCCCHHHHHHHHHTTCEEEEECTTTTTTCCCC-----HHHH-CCSEEEEEGGGGT-SCS-CEEE
T ss_pred CceEEEEeCCcCCccccCCHHHHHHHHHHcCCEEEEEcccccCCCCCC-----chhc-CCCEEEeehhhhc-CCC-cCeE
Confidence 367888899999999999999999999999999999999997766543 1112 3899999999986 475 78 7
Q ss_pred EEeeCcccccccccCCCCccCC-CCceecCCCC-CCh-HHHHHHHHHhCH--------------HHHHHHHHHHHHHHHH
Q 048438 83 LWATNPEYLKNKATESKPVVDY-KDWQITLSRS-FRS-LKLWFVIRNYGM--------------ENLRHFLRSHVNMARL 145 (239)
Q Consensus 83 l~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~-~~~-~~~~~~l~~~g~--------------~g~~~~~~~~~~la~~ 145 (239)
+++++ +.+....... ..+.. ....+..+.. ..+ ..+..+++.+.. +.+++..++..+++++
T Consensus 237 ~~~~~-~~~~~l~~~~-~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (406)
T 3cai_A 237 VFRDP-SVMNSFGSVS-TNPYATGPARLEIGVHQFGLLAGVVASIEYLAALDESARGSRRERLAVSMQSADAYLNRVFDY 314 (406)
T ss_dssp EESCH-HHHHTSCCCC-SCTTCCGGGGGCCSCCCHHHHHHHHHHHHHHHTSSTTCCSSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeh-HHHhhcCCcc-cCCCCCccccccCCCccHHHHHHHHHHHHHHHHhccccccchhhhhhhhHHHHHHHHHHHHHH
Confidence 77643 3332221100 00000 0001111111 111 122233443211 1367778888899999
Q ss_pred HHHHHhCCCCeEEEcCC--CeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhcCcEEEEEE-----
Q 048438 146 FERLVSGDKRFEVVFPC--HFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINASGKAYMTNV----- 218 (239)
Q Consensus 146 l~~~l~~~~g~~~~~~~--~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~----- 218 (239)
+.+.|+++++++++.+. ..++++|.+++.. ...+.+.|.++|.......
T Consensus 315 l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~L~~~gi~v~~g~~~~~~ 370 (406)
T 3cai_A 315 LMVSLRSLPLVMLIGRPEAQIPVVSFAVHKVP------------------------ADRVVQRLADNGILAIANTGSRVL 370 (406)
T ss_dssp HHHHHHTCTTEEECCCCSSBCSEEEEEETTBC------------------------HHHHHHHHHHTTEECEECCSCHHH
T ss_pred HHHHHhcCCCeEEcCCccccCCEEEEEECCcC------------------------HHHHHHHHHHCCcEEecCChHHHH
Confidence 99999998899887653 4678889886421 1245666666665443322
Q ss_pred -EE---CCEeEEEEEecCCCCCc
Q 048438 219 -VL---GGIYAIRFATGATLTEE 237 (239)
Q Consensus 219 -~~---~g~~~lR~~~~~~~t~~ 237 (239)
.. .+..++|++++..+|.+
T Consensus 371 ~~~g~~~~~~~iRis~~~~~t~e 393 (406)
T 3cai_A 371 DVLGVNDVGGAVTVGLAHYSTMA 393 (406)
T ss_dssp HHHTTTTTTCCEEEECCTTCCHH
T ss_pred HHcCCCCCCCeEEEEeecCCCHH
Confidence 00 13468999988776654
No 40
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=99.72 E-value=3.4e-16 Score=135.70 Aligned_cols=159 Identities=9% Similarity=0.045 Sum_probs=108.2
Q ss_pred ccEEEEEecCCCCcccccChhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCcccceEE
Q 048438 4 IPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCL 83 (239)
Q Consensus 4 ~p~~vv~t~gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l 83 (239)
.+.+|+++..+|.+|.+.|+++|.++|++||+++++|+||+.+..+.+ .... ++|++++++||+ ++|.|+|++
T Consensus 163 ~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~-----~~~~-~~di~~~s~sK~-~g~~g~G~~ 235 (423)
T 3lvm_A 163 DTILVSIMHVNNEIGVVQDIAAIGEMCRARGIIYHVDATQSVGKLPID-----LSQL-KVDLMSFSGHKI-YGPKGIGAL 235 (423)
T ss_dssp TEEEEECCSBCTTTCBBCCHHHHHHHHHHHTCEEEEECTTTTTTSCCC-----TTTS-CCSEEEEESTTT-TSCSSCEEE
T ss_pred CcEEEEEeCCCCCCccccCHHHHHHHHHHcCCEEEEEhhhhcCCCCcC-----hhhc-CCCEEEechHHh-cCCCCeEEE
Confidence 467888888899999999999999999999999999999998766544 2233 389999999995 678889999
Q ss_pred EeeCcccccccccCCCCccCCCCceecCCC-C-CChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEcC
Q 048438 84 WATNPEYLKNKATESKPVVDYKDWQITLSR-S-FRSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSGDKRFEVVFP 161 (239)
Q Consensus 84 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~~~~~ 161 (239)
++++. ............. .......+. . .....+..+++.+. +.+++..++..++++++.+.|+++++++++.+
T Consensus 236 ~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~a~~~al~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~ 311 (423)
T 3lvm_A 236 YVRRK-PRVRIEAQMHGGG--HERGMRSGTLPVHQIVGMGEAYRIAK-EEMATEMERLRGLRNRLWNGIKDIEEVYLNGD 311 (423)
T ss_dssp EECBT-TBCCCCCSSCSSC--TTTTTCCSCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHTTSTTEEEESC
T ss_pred EEecc-ccCCCCccccCCc--ccccccCCCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCC
Confidence 98642 2222111000000 000001111 1 11122333444332 23678888889999999999999999998866
Q ss_pred CC---eeEEEEEEcC
Q 048438 162 CH---FAVVCFRVSP 173 (239)
Q Consensus 162 ~~---~~iv~f~~~~ 173 (239)
+. .++++|.+++
T Consensus 312 ~~~~~~~~~~~~~~~ 326 (423)
T 3lvm_A 312 LEHGAPNILNVSFNY 326 (423)
T ss_dssp STTBCTTEEEEEETT
T ss_pred ccccCCCeEEEEeCC
Confidence 43 4688898854
No 41
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.72 E-value=1.1e-16 Score=140.18 Aligned_cols=199 Identities=16% Similarity=0.113 Sum_probs=128.9
Q ss_pred ccEEEEEecCCCCcccccChhHHHHHHHHhCCEEEEecc-cccccccCcccccccCCCCCcceEEEcCcc-----cCCCc
Q 048438 4 IPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAA-YAGSACIFPEFRHFIDGVEGADSFSLNAHK-----WFFAT 77 (239)
Q Consensus 4 ~p~~vv~t~gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A-~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK-----~l~~P 77 (239)
.+.+|++++. |.+|.++|+++|+++||++|+|+|||+. ++.+.+..+. .+ ++|++++++|| |+++|
T Consensus 196 ~t~~v~i~~p-n~tG~~~~l~~i~~la~~~g~~vivd~d~~a~g~~~~~~------~~-g~D~~~~s~kk~~~~~~~~Gp 267 (438)
T 1wyu_A 196 EVGAVVVQNP-NFLGALEDLGPFAEAAHGAGALFVAVADPLSLGVLKPPG------AY-GADIAVGDGQSLGLPMGFGGP 267 (438)
T ss_dssp TEEEEEEESS-CTTSBCCCHHHHHHHHHHTTCEEEEECCTTGGGTBCCHH------HH-TCSEEEEECTTTTCCCGGGCS
T ss_pred CeEEEEEECC-CCCeEEecHHHHHHHHHHcCCEEEEEechhhccCcCCCc------cC-CCCEEEECCcccCCCccCCCC
Confidence 4677888886 9999999999999999999999998765 5555443331 11 39999999888 78889
Q ss_pred ccceEEEeeCcccccccccCC-CCccCC---CCcee-----------cCCCC-C---Ch-HHHHHH--HHHhCHHHHHHH
Q 048438 78 LDCCCLWATNPEYLKNKATES-KPVVDY---KDWQI-----------TLSRS-F---RS-LKLWFV--IRNYGMENLRHF 135 (239)
Q Consensus 78 ~g~g~l~~~~~~~l~~~~~~~-~~~~~~---~~~~~-----------~~~~~-~---~~-~~~~~~--l~~~g~~g~~~~ 135 (239)
++|++++++ ++........ +...+. ..+.+ +.+.. . .+ ..++++ +..++.++++++
T Consensus 268 -~~G~l~~~~-~~~~~l~~~~~g~~~~~~~~~~~~~~l~~~~~~~r~~~~t~~~~~~~~~~a~~aa~~l~~~~~~g~~~~ 345 (438)
T 1wyu_A 268 -HFGFLATKK-AFVRQLPGRLVSETVDVEGRRGFILTLQAREQYIRRAKAKSNITTNAQLTALMGAMYLAALGPEGLREV 345 (438)
T ss_dssp -CCEEEEECG-GGGGGCCSCCEEEEEBTTSCEEEEECCGGGSHHHHGGGSSCCCCSCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -CeeEEEEcH-HHHHhCCCceeccccccCCCcceeeeccccccccchhcccCCccchHHHHHHHHHHHHHHhCHHHHHHH
Confidence 899999864 3333221100 000000 00111 11111 1 11 233333 677788889999
Q ss_pred HHHHHHHHHHHHHHHhCCCCeEEEcC-CCeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhcCcEE
Q 048438 136 LRSHVNMARLFERLVSGDKRFEVVFP-CHFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINASGKAY 214 (239)
Q Consensus 136 ~~~~~~la~~l~~~l~~~~g~~~~~~-~~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~ 214 (239)
.++..++++++.+.|++++|++++.+ +..+++.|+.+. . ...+.++|.++|...
T Consensus 346 ~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~-~------------------------~~~~~~~L~~~gi~v 400 (438)
T 1wyu_A 346 ALKSVEMAHKLHALLLEVPGVRPFTPKPFFNEFALALPK-D------------------------PEAVRRALAERGFHG 400 (438)
T ss_dssp HHHHHHHHHHHHHHHTTSTTCEECSCSSBCSEEEEECSS-C------------------------HHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHHHhcCCCeEECCCCCeEEEEEEeCCC-C------------------------HHHHHHHHHHCCcee
Confidence 99999999999999999889998865 345566676531 1 125666777776654
Q ss_pred -EEEEEECCEeEEEEEecCCCCCc
Q 048438 215 -MTNVVLGGIYAIRFATGATLTEE 237 (239)
Q Consensus 215 -~~~~~~~g~~~lR~~~~~~~t~~ 237 (239)
+......+..++|++++..+|.+
T Consensus 401 ~~~~~~~~~~~~lRis~~~~~t~e 424 (438)
T 1wyu_A 401 ATPVPREYGENLALFAATELHEEE 424 (438)
T ss_dssp CEECCTTSCSSEEEEECCTTCCHH
T ss_pred ccccccccCCCeEEEEecccCCHH
Confidence 12222223568999988666554
No 42
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=99.71 E-value=4.6e-17 Score=139.06 Aligned_cols=156 Identities=11% Similarity=0.063 Sum_probs=107.0
Q ss_pred ccEEEEEecCCCCcccccChhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCcccceEE
Q 048438 4 IPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCL 83 (239)
Q Consensus 4 ~p~~vv~t~gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l 83 (239)
.+.+|++++.+|.+|.+.|+++|.++|++||++ |+|++|+.+..+.+ +..+ ++|++++++||+ ++|.|+|++
T Consensus 138 ~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~-i~D~a~~~g~~~~~-----~~~~-~~di~~~s~sK~-~g~~g~G~~ 209 (382)
T 4eb5_A 138 DTILVSVQHANNEIGTIQPVEEISEVLAGKAAL-HIDATASVGQIEVD-----VEKI-GADMLTISSNDI-YGPKGVGAL 209 (382)
T ss_dssp TEEEEECCSBCTTTCBBCCHHHHHHHHTTSSEE-EEECTTTBTTBCCC-----HHHH-TCSEEEEETGGG-TCCSSCEEE
T ss_pred CCeEEEEeccCCCccccCCHHHHHHHHHHCCCE-EEEcchhcCCcccC-----cccc-CCCEEEeehHHh-cCCCceEEE
Confidence 356788899999999999999999999999999 99999997655433 2212 389999999998 668889999
Q ss_pred EeeCcccccccccCCCCccCCCCceecCCCC--CChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEcC
Q 048438 84 WATNPEYLKNKATESKPVVDYKDWQITLSRS--FRSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSGDKRFEVVFP 161 (239)
Q Consensus 84 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~~~~~ 161 (239)
++++...+.+..... .. ......+.. .....+..+++.+ .++++++.++..++++++.+.|++++++++..+
T Consensus 210 ~~~~~~~l~~~~~~~-~~----~~~~~~~~~~~~~~~~~~~al~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~ 283 (382)
T 4eb5_A 210 WIRKEAKLQPVILGG-GQ----ENGLRSGSENVPSIVGFGKAAEIT-AMEWREEAERLRRLRDRIIDNVLKIEESYLNGH 283 (382)
T ss_dssp EEETTCCCCCSSCSS-CT----GGGTSCSCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTTSTTEEECSC
T ss_pred EEccccccCceecCC-Cc----cccccCCCccHHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHHHHHhhCCCeEEeCC
Confidence 986542122211000 00 001111111 1112333445443 346788888899999999999999889988755
Q ss_pred CC---eeEEEEEEcC
Q 048438 162 CH---FAVVCFRVSP 173 (239)
Q Consensus 162 ~~---~~iv~f~~~~ 173 (239)
+. .++++|++++
T Consensus 284 ~~~~~~~~~~~~~~~ 298 (382)
T 4eb5_A 284 PEKRLPNNVNVRFSY 298 (382)
T ss_dssp SSSBCTTEEEEEETT
T ss_pred cccCCCCEEEEEeCC
Confidence 32 5688888864
No 43
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.70 E-value=6e-17 Score=138.51 Aligned_cols=191 Identities=15% Similarity=0.116 Sum_probs=124.2
Q ss_pred cEEEEEecCCCCcccccChhHHHHHHHHh--CCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCcccceE
Q 048438 5 PLFLCATIGTTAITAVDPLKPLCDVAKQF--GIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATLDCCC 82 (239)
Q Consensus 5 p~~vv~t~gtt~~G~i~pl~~i~~i~~~~--gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~ 82 (239)
+.+|++++.+|.+|.+.|+++|.++|++| |+++|+|++|+.+..+++ +..+ ++|++++++|||+++|.|+|+
T Consensus 138 ~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~~~li~D~a~~~~~~~~~-----~~~~-~~d~~~~s~~K~~~~~~G~G~ 211 (385)
T 2bkw_A 138 YGAVTVTHVDTSTAVLSDLKAISQAIKQTSPETFFVVDAVCSIGCEEFE-----FDEW-GVDFALTASQKAIGAPAGLSI 211 (385)
T ss_dssp CSEEEEESEETTTTEECCHHHHHHHHHHHCTTSEEEEECTTTTTTSCCC-----TTTT-TCSEEEEESSSTTCCCSCEEE
T ss_pred CCEEEEEccCCCcCeEcCHHHHHHHHHhhCCCCEEEEECccccCCcccc-----cccc-CceEEEecCccccccCCcceE
Confidence 55778889999999999999999999999 999999999987765543 2333 389999999999999999999
Q ss_pred EEeeCccccc-ccc-----cCCCCccCCCCc-----eecCC-------CC-CChHHHHHHHHHhCHHHHHHHHHHHHHHH
Q 048438 83 LWATNPEYLK-NKA-----TESKPVVDYKDW-----QITLS-------RS-FRSLKLWFVIRNYGMENLRHFLRSHVNMA 143 (239)
Q Consensus 83 l~~~~~~~l~-~~~-----~~~~~~~~~~~~-----~~~~~-------~~-~~~~~~~~~l~~~g~~g~~~~~~~~~~la 143 (239)
+++++ +.+. ... .......+...+ ....+ .. ...+.+..+++.+...+++++.++..+++
T Consensus 212 ~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~ 290 (385)
T 2bkw_A 212 SLCSS-RFMDYALNDSKNGHVHGYFSSLRRWTPIMENYEAGKGAYFATPPVQLINSLDVALKEILEEGLHKRWDLHREMS 290 (385)
T ss_dssp EEECH-HHHHHHTCHHHHCCCSCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred EEEcH-HHHHHHHhhccCCCCCceeecHHHHhhHHHhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHH
Confidence 98854 3332 110 000000000000 01111 11 11133344555544445777888888999
Q ss_pred HHHHHHH-hCCCCeEEEcCC-----CeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhcCcEEEEE
Q 048438 144 RLFERLV-SGDKRFEVVFPC-----HFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINASGKAYMTN 217 (239)
Q Consensus 144 ~~l~~~l-~~~~g~~~~~~~-----~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~ 217 (239)
+++.+.| +++ |++++.+. ..++++|.+++ ...+.++|.++|......
T Consensus 291 ~~l~~~L~~~~-g~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~l~~~gi~v~~g 343 (385)
T 2bkw_A 291 DWFKDSLVNGL-QLTSVSRYPSNMSAHGLTAVYVAD--------------------------PPDVIAFLKSHGVVIAGG 343 (385)
T ss_dssp HHHHHHHHTTT-CCEESSCSSSTTBCSSCEEEECSC--------------------------HHHHHHHHHHTTEECBCC
T ss_pred HHHHHHHHHhc-CceecccCcccccCCceEEEecCC--------------------------HHHHHHHHHHCCeEEeCC
Confidence 9999999 887 88887532 36788888743 125666676666543322
Q ss_pred EEE-CCEeEEEEE
Q 048438 218 VVL-GGIYAIRFA 229 (239)
Q Consensus 218 ~~~-~g~~~lR~~ 229 (239)
... .+..++|++
T Consensus 344 ~~~~~~~~~iRis 356 (385)
T 2bkw_A 344 IHKDIGPKYIRIG 356 (385)
T ss_dssp CCTTTGGGEEEEC
T ss_pred CCcccCCCEEEEE
Confidence 111 135689999
No 44
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=99.69 E-value=2e-17 Score=142.24 Aligned_cols=203 Identities=12% Similarity=0.016 Sum_probs=127.6
Q ss_pred cEEEEEecCCCCcccccChhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCcccceEEE
Q 048438 5 PLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLW 84 (239)
Q Consensus 5 p~~vv~t~gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~ 84 (239)
+.+|+++..+|.+|.+.|+++|.++|+++|+++++|+||+.+..+.+ +..+ ++|++++++||++++|.|+|+++
T Consensus 144 ~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~Dea~~~g~~~~~-----~~~~-~~d~~~~s~~K~~~~~~g~g~~~ 217 (396)
T 2ch1_A 144 PKCLFLTHGDSSSGLLQPLEGVGQICHQHDCLLIVDAVASLCGVPFY-----MDKW-EIDAVYTGAQKVLGAPPGITPIS 217 (396)
T ss_dssp CSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTTBTTBCCC-----TTTT-TCCEEECCCC-CCCCCSSCEEEE
T ss_pred CCEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEEccccccCCccc-----hhhc-CcCEEEEcCCccccCCCCeEEEE
Confidence 45777888899999999999999999999999999999997755443 3333 38999999999999999999888
Q ss_pred eeCcccccccccC----CCCccC-------CCC---ceecCCC-CC-ChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH
Q 048438 85 ATNPEYLKNKATE----SKPVVD-------YKD---WQITLSR-SF-RSLKLWFVIRNYGMENLRHFLRSHVNMARLFER 148 (239)
Q Consensus 85 ~~~~~~l~~~~~~----~~~~~~-------~~~---~~~~~~~-~~-~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~ 148 (239)
+++ ..+...... .....+ +.. .....+. .. ....+..+++.+..++++++.++..++++++.+
T Consensus 218 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~ 296 (396)
T 2ch1_A 218 ISP-KALDVIRNRRTKSKVFYWDLLLLGNYWGCYDEPKRYHHTVASNLIFALREALAQIAEEGLENQIKRRIECAQILYE 296 (396)
T ss_dssp ECH-HHHHHHHTCSSCCSCGGGCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred ECH-HHHHhhhhccCcccceEechHHHHHhhhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 854 332211100 000000 000 0001111 11 113333455554445677888888899999999
Q ss_pred HHhCCCCeEEEcCCC----eeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhc-CcEEEEEEEECCE
Q 048438 149 LVSGDKRFEVVFPCH----FAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINAS-GKAYMTNVVLGGI 223 (239)
Q Consensus 149 ~l~~~~g~~~~~~~~----~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~g~ 223 (239)
.|++. |++++.+.. .+++.|+++... + ...+.++|.++ |..........+.
T Consensus 297 ~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~----------------~-------~~~~~~~L~~~~gi~v~~g~~~~~~ 352 (396)
T 2ch1_A 297 GLGKM-GLDIFVKDPRHRLPTVTGIMIPKGV----------------D-------WWKVSQYAMNNFSLEVQGGLGPTFG 352 (396)
T ss_dssp HHHHH-TCCBSSCSGGGBCTTEEEEECCTTC----------------C-------HHHHHHHHHHHHCBCCBCCCGGGTT
T ss_pred HHHHC-CCeeccCCccccCCceEEEEcCCCC----------------C-------HHHHHHHHHHhCCEEEecCccccCC
Confidence 99987 888765432 137888875211 0 12456666654 6544322211234
Q ss_pred eEEEEEecCCCCCcC
Q 048438 224 YAIRFATGATLTEER 238 (239)
Q Consensus 224 ~~lR~~~~~~~t~~~ 238 (239)
.++|++++.+++++|
T Consensus 353 ~~iRi~~~~~~~~~e 367 (396)
T 2ch1_A 353 KAWRVGIMGECSTVQ 367 (396)
T ss_dssp TEEEEECCGGGCSHH
T ss_pred CEEEEECCCCcCCHH
Confidence 689999877665443
No 45
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=99.69 E-value=1.5e-15 Score=129.58 Aligned_cols=157 Identities=10% Similarity=0.103 Sum_probs=104.6
Q ss_pred ccEEEEEecCCCCcccccChhHHHHHHHHhC--CEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCcccce
Q 048438 4 IPLFLCATIGTTAITAVDPLKPLCDVAKQFG--IWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATLDCC 81 (239)
Q Consensus 4 ~p~~vv~t~gtt~~G~i~pl~~i~~i~~~~g--i~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g 81 (239)
.+.+|+++..+|.+|.+.|+++|.++|++|| +++++|++|+.+..+.+ +..+ .+|++++++||+ ++|.|+|
T Consensus 139 ~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~li~Dea~~~~~~~~~-----~~~~-~~di~~~s~sK~-~g~~G~G 211 (384)
T 1eg5_A 139 DTFLVSIMAANNEVGTIQPVEDVTRIVKKKNKETLVHVDAVQTIGKIPFS-----LEKL-EVDYASFSAHKF-HGPKGVG 211 (384)
T ss_dssp TEEEEEEESBCTTTCBBCCHHHHHHHHHHHCTTCEEEEECTTTTTTSCCC-----CTTT-CCSEEEEEGGGG-TSCTTCE
T ss_pred CCeEEEEECCCCCcccccCHHHHHHHHHhcCCceEEEEEhhhhcCCcccC-----chhc-CCCEEEecHHHh-cCCCceE
Confidence 3567888899999999999999999999999 99999999986654332 2333 489999999998 5677889
Q ss_pred EEEeeCcccccccccCCCCccCCCCceecCCCC-CChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEc
Q 048438 82 CLWATNPEYLKNKATESKPVVDYKDWQITLSRS-FRSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSGDKRFEVVF 160 (239)
Q Consensus 82 ~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~~~~ 160 (239)
++++++...+....... .. . ... ...+.. .....+..+++.+ .+.+++..++..++++++.+.|++ +|++++.
T Consensus 212 ~~~~~~~~~~~~~~~~~-~~-~-~~~-~~~~~~~~~~~a~~~al~~~-~~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~ 285 (384)
T 1eg5_A 212 ITYIRKGVPIRPLIHGG-GQ-E-RGL-RSGTQNVPGIVGAARAMEIA-VEELSEAAKHMEKLRSKLVSGLMN-LGAHIIT 285 (384)
T ss_dssp EEEECTTSCCCCSBCSS-CT-T-TTT-BCSCCCHHHHHHHHHHHHHH-HHTHHHHHHHHHHHHHHHHHHHHT-TTCEECS
T ss_pred EEEEcCCCccccccccC-cc-c-ccc-cCCCCChHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHHHHhCC-CCeEEeC
Confidence 98886431012111000 00 0 000 011111 1112333444432 345677888888999999999998 6998876
Q ss_pred CC---CeeEEEEEEcC
Q 048438 161 PC---HFAVVCFRVSP 173 (239)
Q Consensus 161 ~~---~~~iv~f~~~~ 173 (239)
++ ..+++.|.+++
T Consensus 286 ~~~~~~~~~~~~~~~~ 301 (384)
T 1eg5_A 286 PLEISLPNTLSVSFPN 301 (384)
T ss_dssp CTTSBCTTEEEEECTT
T ss_pred CcccCCCCEEEEEeCC
Confidence 53 24678888764
No 46
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=99.68 E-value=1.7e-15 Score=130.24 Aligned_cols=160 Identities=11% Similarity=0.058 Sum_probs=107.4
Q ss_pred ccEEEEEecCCCCcccccChhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCcccceEE
Q 048438 4 IPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCL 83 (239)
Q Consensus 4 ~p~~vv~t~gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l 83 (239)
.+.+|+++..+|.+|.+.|+++|.++|++||+++++|++|+.+..+.+ +..+ +|++++++||+ ++|.|+|++
T Consensus 159 ~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~~-----~~~~--~d~~~~s~~K~-~g~~g~g~~ 230 (400)
T 3vax_A 159 DTLLVSLMHVNNETGVIQPVAELAQQLRATPTYLHVDAAQGYGKVPGD-----LTTP--IDMISISGHKI-GAPKGVGAL 230 (400)
T ss_dssp TEEEEECCSBCTTTCBBCCHHHHHHHHTTSSCEEEEECTTTTTTSGGG-----GGSC--CSEEEEETGGG-TSCSSCEEE
T ss_pred CceEEEEECCCCCceeeCcHHHHHHHHHhcCCEEEEEhhhhcCCCCcC-----hhhc--CcEEEEeHHHh-CCCCceEEE
Confidence 467888889999999999999999999999999999999998766544 3343 89999999995 678899999
Q ss_pred E-eeCcccccccccCCCCccC-CCCceecCCCC-C-ChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEE
Q 048438 84 W-ATNPEYLKNKATESKPVVD-YKDWQITLSRS-F-RSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSGDKRFEVV 159 (239)
Q Consensus 84 ~-~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~-~-~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~~~ 159 (239)
+ +++..+......-...... ........+.. . ....+..+++.+ .++++++.++..++++++.+.|+ .+++++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~-~~~~~~~~~~~~~~~~~l~~~L~-~~~~~~~ 308 (400)
T 3vax_A 231 VTRRREEMDDERVPLEPIMFGGGQERKLRPGTLPVPLIMGLAEAAKIF-EAEHAQWQVAAQDLRSRLLAGLA-STSFQVN 308 (400)
T ss_dssp EECBCSSSTTCBCCCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHHH-HHSHHHHHHHHHHHHHHHHHHHT-TTTCEEC
T ss_pred EEecchhccccccccCceecCCCceeeeecCCCCHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHhhC-CCCEEEe
Confidence 9 8763222100000000000 00001111111 1 112222334432 34567888888899999999999 7899988
Q ss_pred cCCC---eeEEEEEEcC
Q 048438 160 FPCH---FAVVCFRVSP 173 (239)
Q Consensus 160 ~~~~---~~iv~f~~~~ 173 (239)
.++. .+++.|.+++
T Consensus 309 ~~~~~~~~~~~~~~~~~ 325 (400)
T 3vax_A 309 GDQDHVVPHILNLSFED 325 (400)
T ss_dssp SCTTSBCTTEEEEECTT
T ss_pred CCcccCCCCEEEEEeCC
Confidence 6653 3688888765
No 47
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=99.68 E-value=1.7e-16 Score=134.21 Aligned_cols=192 Identities=16% Similarity=0.107 Sum_probs=121.6
Q ss_pred ccEEEEEecCCCCccc---ccChhHHHHHHHHhCCEEEEecccccccccCcccccccCCC-CCcceEEEcCcccCCCccc
Q 048438 4 IPLFLCATIGTTAITA---VDPLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGV-EGADSFSLNAHKWFFATLD 79 (239)
Q Consensus 4 ~p~~vv~t~gtt~~G~---i~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~-~~~Ds~~~~~hK~l~~P~g 79 (239)
.|.+|+++.. +++|. .+++++|.++|++||+++|+|++|+.+............++ ..+|++++++||+ ++|.|
T Consensus 141 ~~~~v~~~~~-~~tG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~-g~~~G 218 (356)
T 1v72_A 141 QPACVSITQA-TEVGSIYTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGCSPAEMTWKAGVDALSFGATKN-GVLAA 218 (356)
T ss_dssp EEEEEEEESS-CTTSCCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCTTTTTGGGTCCEEEECCGGG-TCSSC
T ss_pred CceEEEEEcC-CCCCccCCHHHHHHHHHHHHHcCCeEEEEchhhHhHhccCCCCHHHhhhhhcCCEEEEecccC-CCcCc
Confidence 5677777774 45999 77799999999999999999999975432111000001111 1489999999999 67988
Q ss_pred ceEEEeeCcccccccccCCCCccCCCCceecCCCCC-ChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCCCCeEE
Q 048438 80 CCCLWATNPEYLKNKATESKPVVDYKDWQITLSRSF-RSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSGDKRFEV 158 (239)
Q Consensus 80 ~g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~~ 158 (239)
+|+++. +++.+...... . ...+.... ........++.+..+.+.++.++..++++++.+.|++++|+++
T Consensus 219 ~g~~~~-~~~~~~~~~~~----~-----~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~ 288 (356)
T 1v72_A 219 EAIVLF-NTSLATEMSYR----R-----KRAGHLSSKMRFLSAQIDAYLTDDLWLRNARKANAAAQRLAQGLEGLGGVEV 288 (356)
T ss_dssp EEEEES-SGGGHHHHHHH----H-----HHTTCCCSSTHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHTTCTTEEE
T ss_pred cEEEEE-CHHHHhhHHHH----h-----hccCchhhhHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhCCCcEE
Confidence 888876 44443322100 0 00000011 1222333445554445666777888999999999998889998
Q ss_pred EcCCCeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhcCcEEEEEEEECCEeEEEEEecCCCCCc
Q 048438 159 VFPCHFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINASGKAYMTNVVLGGIYAIRFATGATLTEE 237 (239)
Q Consensus 159 ~~~~~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~ 237 (239)
..++..+++.+.++. .+.++|.++|..+.+.. + +..++|++++...|.+
T Consensus 289 ~~~~~~~~~~~~~~~----------------------------~~~~~l~~~gi~v~~g~-~-~~~~iRi~~~~~~~~~ 337 (356)
T 1v72_A 289 LGGTEANILFCRLDS----------------------------AMIDALLKAGFGFYHDR-W-GPNVVRFVTSFATTAE 337 (356)
T ss_dssp ESCCCSSEEEEEECH----------------------------HHHHHHHHTTCBCBCSS-S-STTEEEEECCTTCCHH
T ss_pred ccCCCccEEEEEcCH----------------------------HHHHHHHhcCeEEeccc-c-CCCeEEEEecCCCCHH
Confidence 877777888777631 45666766776544222 2 2468999966555543
No 48
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=99.67 E-value=4.1e-17 Score=140.85 Aligned_cols=200 Identities=10% Similarity=-0.043 Sum_probs=128.5
Q ss_pred ccEEEEEecCCCCcccccChhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCcccceEE
Q 048438 4 IPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCL 83 (239)
Q Consensus 4 ~p~~vv~t~gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l 83 (239)
.|.+|++++.+|.+|.+.|+++|.++ +|+++|+|+||+.+..+.+ +. .+|++++++||+++.|.|+|++
T Consensus 165 ~~~~v~~~~~~nptG~~~~~~~i~~~---~~~~vivD~a~~~~~~~~~-----~~---~~di~~~s~sK~~~~~gg~g~l 233 (398)
T 2fyf_A 165 SVDVIAWAHNETSTGVAVAVRRPEGS---DDALVVIDATSGAGGLPVD-----IA---ETDAYYFAPQKNFASDGGLWLA 233 (398)
T ss_dssp TCSEEEEESEETTTTEECCCCCCTTC---C-CEEEEECTTTTTTSCCC-----GG---GCSEEEECTTSTTCSCSSEEEE
T ss_pred CCCEEEEeCcCCCcceecchHHhhhh---cCCeEEEEeccccCCcccC-----cc---cCcEEEEecCcccCCCCceEEE
Confidence 35678888899999999999999887 8999999999998766543 22 3899999999999887678888
Q ss_pred EeeCccccccccc-----C-CCCccCCCC------ceec-CCCC-CChHHHHHHHHHhCHHH-HHHHHHHHHHHHHHHHH
Q 048438 84 WATNPEYLKNKAT-----E-SKPVVDYKD------WQIT-LSRS-FRSLKLWFVIRNYGMEN-LRHFLRSHVNMARLFER 148 (239)
Q Consensus 84 ~~~~~~~l~~~~~-----~-~~~~~~~~~------~~~~-~~~~-~~~~~~~~~l~~~g~~g-~~~~~~~~~~la~~l~~ 148 (239)
++++ +.+..... . ...+.+... .... .+.. .....+..+++.+...+ ++++.++..++++++.+
T Consensus 234 ~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~ 312 (398)
T 2fyf_A 234 IMSP-AALSRIEAIAATGRWVPDFLSLPIAVENSLKNQTYNTPAIATLALLAEQIDWLVGNGGLDWAVKRTADSSQRLYS 312 (398)
T ss_dssp EECH-HHHHHHHHHHHTTCCCCGGGCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHH
T ss_pred EECH-HHHHHhhcccccCCCCCcEEehHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH
Confidence 8753 33322100 0 000000000 0000 1111 11234445565554444 78888889999999999
Q ss_pred HHhCCCCeEEEc-CC--Cee-EEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhcCcEEEEEEEECCEe
Q 048438 149 LVSGDKRFEVVF-PC--HFA-VVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINASGKAYMTNVVLGGIY 224 (239)
Q Consensus 149 ~l~~~~g~~~~~-~~--~~~-iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~ 224 (239)
.|++++|++++. ++ ..+ +++|+++.. . + ...+.+.|.++|..+.......+..
T Consensus 313 ~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~---------------~-------~~~l~~~L~~~gI~v~~g~~~~~~~ 369 (398)
T 2fyf_A 313 WAQERPYTTPFVTDPGLRSQVVGTIDFVDD-V---------------D-------AGTVAKILRANGIVDTEPYRKLGRN 369 (398)
T ss_dssp HHHHSTTEEESCCSGGGBCSSEEEEEECTT-S---------------C-------HHHHHHHHHHTTCBCCSCCTTTCSS
T ss_pred HHHHcCCceeccCChhhcCCcEEEEECCCC-C---------------C-------HHHHHHHHHHCCcEEecCcccCCCC
Confidence 999988999874 23 466 899998531 1 0 1256667777766543321112346
Q ss_pred EEEEEecCCCCCcC
Q 048438 225 AIRFATGATLTEER 238 (239)
Q Consensus 225 ~lR~~~~~~~t~~~ 238 (239)
++|++++..+|.+|
T Consensus 370 ~iRis~~~~~t~e~ 383 (398)
T 2fyf_A 370 QLRVAMFPAVEPDD 383 (398)
T ss_dssp EEEEECCTTSCHHH
T ss_pred EEEEEecCCCCHHH
Confidence 89999988766543
No 49
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=99.67 E-value=3.4e-16 Score=133.24 Aligned_cols=193 Identities=11% Similarity=0.079 Sum_probs=123.4
Q ss_pred ccEEEEEecCCCCcccc-cChhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCcccceE
Q 048438 4 IPLFLCATIGTTAITAV-DPLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATLDCCC 82 (239)
Q Consensus 4 ~p~~vv~t~gtt~~G~i-~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~ 82 (239)
.+-+|++++.+|.||.+ .|+++| +|+++|||+||+.+..+.+ +.. .|++++++|||++ |.|+|+
T Consensus 142 ~t~~v~~~~~~n~tG~~~~~l~~i------~~~~vivD~a~~~~~~~~~-----~~~---~d~~~~s~~K~~g-~~G~G~ 206 (362)
T 2c0r_A 142 NAAYLHLTSNETIEGAQFKAFPDT------GSVPLIGDMSSDILSRPFD-----LNQ---FGLVYAGAQKNLG-PSGVTV 206 (362)
T ss_dssp TEEEEEEESEETTTTEECSSCCCC------TTSCEEEECTTTTTSSCCC-----GGG---CSEEEEETTTTTC-CSSCEE
T ss_pred CcCEEEEeCCcCccceeccccccc------CCCEEEEEChhhccCCccc-----hhH---CcEEEEecccccc-CcCcEE
Confidence 46778889999999994 899988 8999999999998866543 332 5999999999985 889999
Q ss_pred EEeeCcccccccccCCCCccCCCCc----eecCCCC-CChHHHHHHHHHhCHH-HHHHHHHHHHHHHHHHHHHHhCCCCe
Q 048438 83 LWATNPEYLKNKATESKPVVDYKDW----QITLSRS-FRSLKLWFVIRNYGME-NLRHFLRSHVNMARLFERLVSGDKRF 156 (239)
Q Consensus 83 l~~~~~~~l~~~~~~~~~~~~~~~~----~~~~~~~-~~~~~~~~~l~~~g~~-g~~~~~~~~~~la~~l~~~l~~~~g~ 156 (239)
+++++ +.+...........++... ....+-. +....+..+++.+... +++++.++..++++++.+.|++++++
T Consensus 207 l~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 285 (362)
T 2c0r_A 207 VIVRE-DLVAESPKHLPTMLRYDTYVKNNSLYNTPPSFGIYMVNEVLKWIEERGGLEGVQQANRKKASLIYDAIDQSGGF 285 (362)
T ss_dssp EEEEG-GGSSSCCTTSCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTS
T ss_pred EEEcH-HHHhhccccCchHHhHHHHhhccCcCCCchHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHcCCc
Confidence 99854 3433221100011110000 0001111 1223444556554443 68888999999999999999998546
Q ss_pred -EEEcCC---CeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhcCcEEEEEEEECCEeEEEEEecC
Q 048438 157 -EVVFPC---HFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINASGKAYMTNVVLGGIYAIRFATGA 232 (239)
Q Consensus 157 -~~~~~~---~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~ 232 (239)
++..++ ..++++|.+++. .....+.+.|.++|...... ......+|+++++
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~L~~~gi~~~~g--~~~~~~iRis~~~ 340 (362)
T 2c0r_A 286 YRGCVDVDSRSDMNITFRLASE-----------------------ELEKEFVKASEQEGFVGLKG--HRSVGGLRASIYN 340 (362)
T ss_dssp SEESSCGGGBCSSEEEEECSCH-----------------------HHHHHHHHHHHHTTEESCBC--CTTTCSEEEECCT
T ss_pred cccCCChHHcCCcEEEEEcCCc-----------------------chHHHHHHHHHHCCCeeccC--CCCCCEEEEECCC
Confidence 775432 345778887531 11235666777777643321 1112469999988
Q ss_pred CCCCc
Q 048438 233 TLTEE 237 (239)
Q Consensus 233 ~~t~~ 237 (239)
++|.+
T Consensus 341 ~~~~e 345 (362)
T 2c0r_A 341 AVPYE 345 (362)
T ss_dssp TSCHH
T ss_pred CCCHH
Confidence 77754
No 50
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=99.66 E-value=1.4e-15 Score=130.67 Aligned_cols=200 Identities=15% Similarity=0.094 Sum_probs=128.9
Q ss_pred CCccEEEEEecCCCCcccccChhHHHHHHHHhCCEEEEecccccccccCccccc--ccCCC-CCcceEEEcCcccCCCcc
Q 048438 2 GLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRH--FIDGV-EGADSFSLNAHKWFFATL 78 (239)
Q Consensus 2 g~~p~~vv~t~gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~--~~~~~-~~~Ds~~~~~hK~l~~P~ 78 (239)
|..+.+|+.+..+|.+|.+.|+++|.++|++||+++++|++|+.+....+ ... ...++ ...|+++.++||+++++.
T Consensus 173 ~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~-~~~~~~~~~~~~~~di~~~s~sK~~~g~~ 251 (399)
T 3tqx_A 173 GARFKLIATDGVFSMDGIIADLKSICDLADKYNALVMVDDSHAVGFIGEN-GRGTPEYCGVADRVDILTGTLGKALGGAS 251 (399)
T ss_dssp TCSSEEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTSSTT-SCCHHHHHTCTTCCSEEEEESSSSSCSSC
T ss_pred CCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCCEEEEECCccccccCCC-CCchHHhhCCCCCCcEEEecchHhcccCc
Confidence 34688899999999999999999999999999999999999975543221 111 01121 248999999999998676
Q ss_pred cceEEEeeCcccccccccCCCCccCCCCceecCCCC-CChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCCCCeE
Q 048438 79 DCCCLWATNPEYLKNKATESKPVVDYKDWQITLSRS-FRSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSGDKRFE 157 (239)
Q Consensus 79 g~g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~ 157 (239)
| |+++.+ ++.+....... ..+....+.. .....+..+++.+. +..++..++..++.+++.+.|++. |++
T Consensus 252 g-G~~~~~-~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~-g~~ 321 (399)
T 3tqx_A 252 G-GYTSGH-KEIIEWLRNRS------RPYLFSNTVAPVIVATSLKVLELLK-TEGPQLRKQLQENSRYFRAGMEKL-GFQ 321 (399)
T ss_dssp C-EEEEEC-HHHHHHHHHHC------HHHHSSCCCCHHHHHHHHHHHHHHH-HTHHHHHHHHHHHHHHHHHHHHHH-TCC
T ss_pred e-EEEEcC-HHHHHHHHHhC------cceeccCCCcHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHHHHHHHc-CCC
Confidence 6 776653 33333221100 0011111111 11122333344332 446777788889999999999887 777
Q ss_pred EEcCCCeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhcCcEEEEEEE----ECCEeEEEEEecCC
Q 048438 158 VVFPCHFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINASGKAYMTNVV----LGGIYAIRFATGAT 233 (239)
Q Consensus 158 ~~~~~~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~----~~g~~~lR~~~~~~ 233 (239)
+. ++..+++.+.++.. .....+.++|.++|.... +.. ..+..++|++++..
T Consensus 322 ~~-~~~~~~~~~~~~~~-----------------------~~~~~~~~~l~~~gi~v~-~~~~~~~~~~~~~iRi~~~~~ 376 (399)
T 3tqx_A 322 LV-PGNHPIIPVMLGDA-----------------------QLATNMADHLLQEGIYVV-GFSYPVVPMGKARIRVQMSAV 376 (399)
T ss_dssp BC-CCSSSEEEEEEECH-----------------------HHHHHHHHHHHHTTEECC-EECTTTSCTTCEEEEEECCTT
T ss_pred cC-CCCCCEEEEEeCCH-----------------------HHHHHHHHHHHHCCCEEe-eeCCCCCCCCCceEEEEeecC
Confidence 66 66778888887641 223467777877765544 322 23567999998766
Q ss_pred CCCc
Q 048438 234 LTEE 237 (239)
Q Consensus 234 ~t~~ 237 (239)
.|.+
T Consensus 377 ~~~~ 380 (399)
T 3tqx_A 377 HTQQ 380 (399)
T ss_dssp CCHH
T ss_pred CCHH
Confidence 5544
No 51
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=99.65 E-value=6.2e-15 Score=128.49 Aligned_cols=199 Identities=16% Similarity=0.048 Sum_probs=128.8
Q ss_pred ccEEEEEecCCCCcccccChhHHHHHHHHhCCEEEEecccccccccCccccccc--CCC-CCcceEEEcCcccCCCcccc
Q 048438 4 IPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFI--DGV-EGADSFSLNAHKWFFATLDC 80 (239)
Q Consensus 4 ~p~~vv~t~gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~--~~~-~~~Ds~~~~~hK~l~~P~g~ 80 (239)
.+.+|+++...+++|.+.|+++|.++|++||+++++|.+|+.+.+.- ..+... .++ ..+|+++.++||+++ +.|
T Consensus 194 ~~~~v~~~~~~n~tG~~~~l~~l~~l~~~~g~~li~Dea~~~~~~~~-~g~~~~~~~~~~~~~di~~~s~sK~~g-~~g- 270 (427)
T 2w8t_A 194 PAKLVVLEGVYSMLGDIAPLKEMVAVAKKHGAMVLVDEAHSMGFFGP-NGRGVYEAQGLEGQIDFVVGTFSKSVG-TVG- 270 (427)
T ss_dssp SCEEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTSST-TSCCHHHHTTCTTCCSEEEEESSSTTC-SCC-
T ss_pred CCeEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCC-CCCchHhhcCCCcCCcEEEecchhhhc-cCC-
Confidence 46778888888999999999999999999999999999999876531 111111 121 248999999999987 555
Q ss_pred eEEEeeCcccccccccCCCCccCCCCceecCCCC-CChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEE
Q 048438 81 CCLWATNPEYLKNKATESKPVVDYKDWQITLSRS-FRSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSGDKRFEVV 159 (239)
Q Consensus 81 g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~~~ 159 (239)
|+++.+ ++.+....... ..+....+.. .....+..+++.+. .++++.++..++++++.+.|++. |+++.
T Consensus 271 G~v~~~-~~l~~~l~~~~------~~~~~~~~~~~~~~aa~~~al~~~~--~~~~~~~~~~~~~~~l~~~L~~~-g~~~~ 340 (427)
T 2w8t_A 271 GFVVSN-HPKFEAVRLAC------RPYIFTASLPPSVVATATTSIRKLM--TAHEKRERLWSNARALHGGLKAM-GFRLG 340 (427)
T ss_dssp EEEEEC-CTTGGGGGGTC------HHHHSSCCCCHHHHHHHHHHHHHHT--SCHHHHHHHHHHHHHHHHHHHHH-TCEES
T ss_pred CEEEeC-HHHHHHHHHhc------ccccccCCCCHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHc-CCccc
Confidence 777764 34443322100 0011111111 11222234455432 23567777889999999999987 88887
Q ss_pred cCC-CeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhcCcEEEEEEE---ECCEeEEEEEecCCCC
Q 048438 160 FPC-HFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINASGKAYMTNVV---LGGIYAIRFATGATLT 235 (239)
Q Consensus 160 ~~~-~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~---~~g~~~lR~~~~~~~t 235 (239)
.++ ..+++.+.+++ ......+.+.|.++|........ ..+..++|++++..+|
T Consensus 341 ~~~~~~~~~~~~~~~-----------------------~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRi~~~~~~t 397 (427)
T 2w8t_A 341 TETCDSAIVAVMLED-----------------------QEQAAMMWQALLDGGLYVNMARPPATPAGTFLLRCSICAEHT 397 (427)
T ss_dssp CSSCCSSEEEEEESS-----------------------HHHHHHHHHHHHHTTEECEEECTTTSCTTCEEEEEECCTTCC
T ss_pred CCCCCCCEEEEEECC-----------------------HHHHHHHHHHHHHCCeEEeeeCCCCCCCCCeEEEEEeCCCCC
Confidence 555 67888888854 12234677788777655443221 1345799999887776
Q ss_pred CcC
Q 048438 236 EER 238 (239)
Q Consensus 236 ~~~ 238 (239)
.+|
T Consensus 398 ~e~ 400 (427)
T 2w8t_A 398 PAQ 400 (427)
T ss_dssp HHH
T ss_pred HHH
Confidence 553
No 52
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=99.62 E-value=9e-17 Score=136.83 Aligned_cols=155 Identities=15% Similarity=0.092 Sum_probs=104.8
Q ss_pred ccEEEEEecCCCCcccccChhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCcccceEE
Q 048438 4 IPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCL 83 (239)
Q Consensus 4 ~p~~vv~t~gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l 83 (239)
.+.+|+++..+|.+|.+.|+++|.++|++||+++++|++|+.+..+.+ ...+ ++|++++++||++++|.++|++
T Consensus 147 ~~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~li~D~a~~~~~~~~~-----~~~~-~~di~~~s~sK~~~~~~~~G~~ 220 (371)
T 2e7j_A 147 EVVLALITYPDGNYGNLPDVKKIAKVCSEYDVPLLVNGAYAIGRMPVS-----LKEI-GADFIVGSGHKSMAASGPIGVM 220 (371)
T ss_dssp CEEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEECTTTBTTBCCC-----HHHH-TCSEEEEEHHHHSSCCSSCEEE
T ss_pred CeEEEEEECCCCCCcccCCHHHHHHHHHHcCCeEEEECccccCCCCCC-----hhhc-CCCEEEecCCcCCCCCCCcEEE
Confidence 567889999999999999999999999999999999999998765433 1112 3899999999999999999999
Q ss_pred EeeCcccccc-cccCCCCccCCCCceecCCC-CCC-hHHHHHHHHHhCHHHHHHHHHHH--HHHHHHHHHHHhCCCCeEE
Q 048438 84 WATNPEYLKN-KATESKPVVDYKDWQITLSR-SFR-SLKLWFVIRNYGMENLRHFLRSH--VNMARLFERLVSGDKRFEV 158 (239)
Q Consensus 84 ~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~l~~~g~~g~~~~~~~~--~~la~~l~~~l~~~~g~~~ 158 (239)
++++ +.+.. ......... ....+..+. ... ...+..+++.+.. +..++. .++++++.+.|++. ++++
T Consensus 221 ~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~a~~~~l~~~~~----~~~~~~~~~~~~~~l~~~L~~~-~~~~ 292 (371)
T 2e7j_A 221 GMKE-EWAEIVLRRSEKYKN--KEVELLGCTARGATIITLMASFPHVRE----RIKRWDEEVEKARRFAAEMEKL-GIKQ 292 (371)
T ss_dssp EECT-TTTTTTTCBCSSCTT--SBGGGTTCCCCSHHHHHHHHHHHHHHH----HGGGHHHHHHHHHHHHHHHHHT-TCEE
T ss_pred EEec-hhhhhhccccccCcc--cccccccCCcCHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHc-CcEE
Confidence 9864 33333 221100000 000011111 111 1223334443322 455556 78899999999987 9998
Q ss_pred EcCC--CeeEEEEEEc
Q 048438 159 VFPC--HFAVVCFRVS 172 (239)
Q Consensus 159 ~~~~--~~~iv~f~~~ 172 (239)
+.++ ..++++|.++
T Consensus 293 ~~~~~~~~~~~~~~~~ 308 (371)
T 2e7j_A 293 LGDNPHNHDLMFFHAE 308 (371)
T ss_dssp ESSSSCCSSEEEEECH
T ss_pred ecCCCccCceEEEECC
Confidence 8654 4778888764
No 53
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=99.61 E-value=1.2e-14 Score=126.15 Aligned_cols=160 Identities=11% Similarity=0.136 Sum_probs=104.2
Q ss_pred ccEEEEEecCCCCcccccChhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCccc-ceE
Q 048438 4 IPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATLD-CCC 82 (239)
Q Consensus 4 ~p~~vv~t~gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g-~g~ 82 (239)
.+.+|+++..+|.+|.+.|+++|+++|++||+++|+|++|+.+...... . .. ++|++++++||++++|.+ .|.
T Consensus 140 ~~~~v~~~~~~n~~G~~~~l~~i~~l~~~~~~~li~D~~~~~~~~~~~~----~-~~-~~di~~~S~~K~~~~~~~~~G~ 213 (412)
T 2cb1_A 140 KTRAVFVETVANPALLVPDLEALATLAEEAGVALVVDNTFGAAGALCRP----L-AW-GAHVVVESLTKWASGHGSVLGG 213 (412)
T ss_dssp TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECGGGTTTTSCCG----G-GG-TCSEEEEETTTTTTCSSCCCCE
T ss_pred CCeEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEECCCccccccCCc----c-cc-CCeEEEECCcccccCCCCcEEE
Confidence 3567888999999999999999999999999999999999877222211 1 11 399999999999999877 777
Q ss_pred EEeeCccccc----ccccC--CC----------CccC-CCCce-ecCCCCCChHHHHHHHHHhCHHHHHHHHHHHHHHHH
Q 048438 83 LWATNPEYLK----NKATE--SK----------PVVD-YKDWQ-ITLSRSFRSLKLWFVIRNYGMENLRHFLRSHVNMAR 144 (239)
Q Consensus 83 l~~~~~~~l~----~~~~~--~~----------~~~~-~~~~~-~~~~~~~~~~~~~~~l~~~g~~g~~~~~~~~~~la~ 144 (239)
+++.++.... ..... .+ ...+ ...+. ...+....+...+..+.. .+.+.+++++..++++
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~g~~~~~~~a~~~~~~--l~~l~~~~~~~~~~~~ 291 (412)
T 2cb1_A 214 AVLSRETELWRNYPQFLQPDLKGQIPWEALRARCFPERVRTLGLSLCGMALSPFNAYLLFQG--LETVALRVARMSETAR 291 (412)
T ss_dssp EEEECCCSGGGGSGGGGCC-------HHHHGGGHHHHHHHHHHTTTTCCCCCHHHHHHHHHH--GGGHHHHHHHHHHHHH
T ss_pred EEEeccccccccccccccccccccchhhccchHHHHHHHHHHHHHhcCCCCChHHhHHHHcC--CchHHHHHHHHHHHHH
Confidence 7775532100 00000 00 0000 00000 001222334444444433 3455677777889999
Q ss_pred HHHHHHhCCCCeEEEc-C----------------CCeeEEEEEE
Q 048438 145 LFERLVSGDKRFEVVF-P----------------CHFAVVCFRV 171 (239)
Q Consensus 145 ~l~~~l~~~~g~~~~~-~----------------~~~~iv~f~~ 171 (239)
++.+.|.+.++++++. | ...++++|.+
T Consensus 292 ~l~~~L~~~~~v~~v~~p~~~~~p~~~~~~~~~~~~~~iv~~~~ 335 (412)
T 2cb1_A 292 FLAERLQGHPKVKALRYPGLPEDPAHRNARKYLASGGPILTLDL 335 (412)
T ss_dssp HHHHHHHTCTTCSEEECTTSTTCTTHHHHHHHCSSSCSEEEEEC
T ss_pred HHHHHHHcCCCeeEEECCCCCCCccHHHHHHhCCCCceEEEEEe
Confidence 9999999988988552 2 1357999999
No 54
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=99.61 E-value=3.2e-15 Score=131.23 Aligned_cols=189 Identities=12% Similarity=0.008 Sum_probs=116.9
Q ss_pred cEEEEEecCCCCcccccChhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCcccceEEE
Q 048438 5 PLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLW 84 (239)
Q Consensus 5 p~~vv~t~gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~ 84 (239)
+.+|+++. +|.+|.+.|+++|+++|++||+++|+|+||++ .+.+.........+ ++|+++.|+||++++|.|+|+++
T Consensus 147 ~~~v~~~~-~n~~G~~~~l~~I~~l~~~~~~~livDea~~~-~~~f~~~~~~~~~~-g~Di~~~S~~K~l~~~~g~g~l~ 223 (446)
T 2x3l_A 147 HKLVVLTY-PNYYGETFNVEEVIKSLHQLNIPVLIDEAHGA-HFGLQGFPDSTLNY-QADYVVQSFHKTLPALTMGSVLY 223 (446)
T ss_dssp CCEEEEES-SCTTSCCCCHHHHHHHHHHTTCCEEEECTTCT-TTTSTTSCCCGGGG-TCSEEEECHHHHSSSCTTCEEEE
T ss_pred ceEEEEEC-CCCCeEecCHHHHHHHHHhcCCeEEEcchhhh-hhccCCCCCChHHc-CCCEEEECCccccccccccEEEE
Confidence 45677777 67799999999999999999999999999987 34222110001112 38999999999999999999999
Q ss_pred eeCccccc--ccccCCCCccCCCCceecCCCC-CCh-HHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEc
Q 048438 85 ATNPEYLK--NKATESKPVVDYKDWQITLSRS-FRS-LKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSGDKRFEVVF 160 (239)
Q Consensus 85 ~~~~~~l~--~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~~~~ 160 (239)
+++. .+. ..... ......+.. ... ..+..+++.+...+.++..++..++++++++. |++++.
T Consensus 224 ~~~~-~i~~~~~~~~--------~~~~~~~s~~~~~~aal~~a~~~l~~~g~~~~~~~~~~l~~~l~~~-----g~~~~~ 289 (446)
T 2x3l_A 224 IHKN-APYRENIIEY--------LSYFQTSSPSYLIMASLESAAQFYKTYDSTLFFAKRAQLIECLENK-----GFEMLQ 289 (446)
T ss_dssp EETT-CTTHHHHHHH--------HHHHSCSSCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH-----TCEEEE
T ss_pred EcCC-cCCHHHHHHH--------HHHHcCCCchHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHc-----CCEECc
Confidence 8653 322 11000 000111111 111 23333444443333344666777888888777 788776
Q ss_pred CCCeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhcCcEEEEEEEECCEeEEEEEecCCCCCcC
Q 048438 161 PCHFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINASGKAYMTNVVLGGIYAIRFATGATLTEER 238 (239)
Q Consensus 161 ~~~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~ 238 (239)
+...+.+.|.+++.. ...+.+.|.++|.. +. ..|...+|++++..+|.+|
T Consensus 290 ~~~~~~l~i~~~~~~------------------------~~~l~~~L~~~GI~-v~---~~g~~~iRi~~~~~~t~e~ 339 (446)
T 2x3l_A 290 VDDPLKLLIKYEGFT------------------------GHDIQNWFMNAHIY-LE---LADDYQALAILPLWHHDDT 339 (446)
T ss_dssp CSSTTEEEEECTTSC------------------------HHHHHHHHHHTTEE-ES---EECSSCEEEECCCCCTTCC
T ss_pred CCCCeEEEEEeCCcC------------------------HHHHHHHHHHCCCE-EE---ecCCCEEEEEeecCCCHHH
Confidence 543345677765321 11466677777544 32 1245689999887666654
No 55
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=99.61 E-value=1.5e-15 Score=134.26 Aligned_cols=201 Identities=16% Similarity=0.129 Sum_probs=122.9
Q ss_pred cEEEEEecCCCCcccc-cChhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCcc-----
Q 048438 5 PLFLCATIGTTAITAV-DPLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATL----- 78 (239)
Q Consensus 5 p~~vv~t~gtt~~G~i-~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~----- 78 (239)
+.+|+++.. |.+|.+ +|+++|+++|++||+++|+|++|+.+.+.. .+ ...+ ++|++++++||++++|.
T Consensus 204 t~~v~~~~p-n~~G~~~~~l~~i~~l~~~~g~~li~Dea~~~~~~g~--~~--~~~~-g~di~~~s~~K~~~~p~g~gG~ 277 (474)
T 1wyu_B 204 VAALMLTNP-NTLGLFERRILEISRLCKEAGVQLYYDGANLNAIMGW--AR--PGDM-GFDVVHLNLHKTFTVPHGGGGP 277 (474)
T ss_dssp EEEEEECSS-CTTSCCCTTHHHHHHHHHHHTCEEEEEGGGGGGTTTT--CC--HHHH-TCSEEECCTTTTTCCCCTTSCC
T ss_pred ceEEEEECC-CCCcccCCCHHHHHHHHHHcCCEEEEeCchhhhhccC--CC--cccC-CCcEEEEeCccccccCCCCCCC
Confidence 456677775 569998 899999999999999999999997665411 11 1111 39999999999999996
Q ss_pred cceEEEeeCccccccccc-----CC-CCccCCC------CceecCCCCCChHHHHHHHHHhCHHHHHHHHHHHHHHHHHH
Q 048438 79 DCCCLWATNPEYLKNKAT-----ES-KPVVDYK------DWQITLSRSFRSLKLWFVIRNYGMENLRHFLRSHVNMARLF 146 (239)
Q Consensus 79 g~g~l~~~~~~~l~~~~~-----~~-~~~~~~~------~~~~~~~~~~~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l 146 (239)
++|++++++ ..+..... .. ....++. ......+........|..++.+|.+++++..++..++++++
T Consensus 278 ~~G~~~~~~-~l~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~g~~~l~~~~~~~~~~~~~l 356 (474)
T 1wyu_B 278 GSGPVGVKA-HLAPYLPVPLVERGEEGFYLDFDRPKSIGRVRSFYGNFLALVRAWAYIRTLGLEGLKKAAALAVLNARYL 356 (474)
T ss_dssp CCCCEEECG-GGGGGCCSCEEEECSSCEEEECCCTTCCCCSSSTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEcH-HHHHhCCCCeeeccCCeeEecccCcccCcccccCcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 589999865 33322210 00 0000000 00000000011244455566677888989899999999999
Q ss_pred HHHHhCCCCeEEEcCC-CeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhcCcEEEEEEEEC--CE
Q 048438 147 ERLVSGDKRFEVVFPC-HFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINASGKAYMTNVVLG--GI 223 (239)
Q Consensus 147 ~~~l~~~~g~~~~~~~-~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~--g~ 223 (239)
.+.|++. |+++..+. ..+...+.++ .+. ....+.++|.++|... ...... ..
T Consensus 357 ~~~L~~~-g~~~~~~~~~~~~~~~~~~-~~~----------------------~~~~l~~~L~~~Gi~~-~~~~~~~~~~ 411 (474)
T 1wyu_B 357 KELLKEK-GYRVPYDGPSMHEFVAQPP-EGF----------------------RALDLAKGLLELGFHP-PTVYFPLIVK 411 (474)
T ss_dssp HHHHHHT-TCBCSSCSSCCSCEEEBCS-TTC----------------------CHHHHHHHHHHTTCCC-CEESCSTTST
T ss_pred HHHHhhc-CcEecCCCCcceEEEEEcC-CCC----------------------CHHHHHHHHHHCCccc-cccccccccC
Confidence 9999987 88874332 2321223332 111 0125666777777653 211111 24
Q ss_pred eEEEEEecCCCCCc
Q 048438 224 YAIRFATGATLTEE 237 (239)
Q Consensus 224 ~~lR~~~~~~~t~~ 237 (239)
.++|+++...+|.+
T Consensus 412 ~~lRis~~~~~t~e 425 (474)
T 1wyu_B 412 EALMVEPTETEAKE 425 (474)
T ss_dssp TCEEECCCTTSCHH
T ss_pred CEEEEEeecCCCHH
Confidence 68999988766654
No 56
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=99.60 E-value=1.9e-15 Score=133.93 Aligned_cols=159 Identities=8% Similarity=0.046 Sum_probs=102.0
Q ss_pred cEEEEEecCCCCcccccChhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCcccceEEE
Q 048438 5 PLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLW 84 (239)
Q Consensus 5 p~~vv~t~gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~ 84 (239)
|-+|++ +.++.+ .+.|+++|+++|+++|+++++|+||+.+.+..+.....+. .+|++++++||+|.+|.| |+++
T Consensus 194 tklIi~-~~sn~~-~~~dl~~i~~ia~~~g~~livD~ah~~g~~~~~~~~~p~~---~~div~~s~~K~l~Gprg-G~i~ 267 (483)
T 1rv3_A 194 PKLIIA-GTSCYS-RNLDYGRLRKIADENGAYLMADMAHISGLVVAGVVPSPFE---HCHVVTTTTHKTLRGCRA-GMIF 267 (483)
T ss_dssp CSEEEE-CCSSCC-SCCCHHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCGGG---TCSEEEEESSGGGCCCSC-EEEE
T ss_pred CcEEEE-eCCcCC-CcCCHHHHHHHHHHcCCEEEEEccchhcccccCCCCCCCC---CCcEEEecCcccCCCCCc-eEEE
Confidence 556666 556666 8999999999999999999999999877664432211121 489999999999999998 9999
Q ss_pred eeCcccccccccCCCC--ccCCC---Cce-ec--CCCC-C-ChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 048438 85 ATNPEYLKNKATESKP--VVDYK---DWQ-IT--LSRS-F-RSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSGDK 154 (239)
Q Consensus 85 ~~~~~~l~~~~~~~~~--~~~~~---~~~-~~--~~~~-~-~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~ 154 (239)
+++. ... .....+. ..+.. ... .. .+.. . ...++..+++.+...+++++.++..++++++.+.|.+.
T Consensus 268 ~~~~-~~~-~~~~~g~~~~y~~~~~~~~~~~~~~~g~~~~~~iaal~~Al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~- 344 (483)
T 1rv3_A 268 YRRG-VRS-VDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTPEFKEYQRQVVANCRALSAALVEL- 344 (483)
T ss_dssp EECS-BCC--------CCBCCHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHT-
T ss_pred Ecch-hhh-hccccCcchhhHHHHHhhhhcCCcccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHhc-
Confidence 8753 211 0000000 00000 000 00 1111 1 12344456666555678888999999999999999987
Q ss_pred CeEEEcCC-CeeEEEEEEc
Q 048438 155 RFEVVFPC-HFAVVCFRVS 172 (239)
Q Consensus 155 g~~~~~~~-~~~iv~f~~~ 172 (239)
|++++.+. ....+.+.+.
T Consensus 345 g~~~~~~~~~~~~~~v~~~ 363 (483)
T 1rv3_A 345 GYKIVTGGSDNHLILVDLR 363 (483)
T ss_dssp TCEEGGGSCSSSEEEEEGG
T ss_pred CCEeccCCCCCceEEEecc
Confidence 99987653 2234445554
No 57
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=99.60 E-value=8.1e-15 Score=126.24 Aligned_cols=199 Identities=16% Similarity=0.052 Sum_probs=124.3
Q ss_pred ccEEEEEecCCCCcccccChhHHHHHHHHhCCEEEEecccccccc-cCcccccccCCC-CCcceEEEcCcccCCCcccce
Q 048438 4 IPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSAC-IFPEFRHFIDGV-EGADSFSLNAHKWFFATLDCC 81 (239)
Q Consensus 4 ~p~~vv~t~gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A~~~~~~-~~~~~~~~~~~~-~~~Ds~~~~~hK~l~~P~g~g 81 (239)
.+.+|+++..+|.+|.+.|+++|.++|++||+++++|++|+.+.. .....-....++ ..+|+++.++||+++++.| |
T Consensus 177 ~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~di~~~s~sK~~~~~~g-G 255 (401)
T 1fc4_A 177 RHVLIATDGVFSMDGVIANLKGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDVMGRVDIITGTLGKALGGASG-G 255 (401)
T ss_dssp SSEEEEEESEETTTTEECCHHHHHHHHHHTTEEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTCSSSC-E
T ss_pred CceEEEEeCCcCCCCCCCCHHHHHHHHHHcCCEEEEECcccccccCCCCCccHHHcCCCcCCcEEEecchhhccCCCC-E
Confidence 577888888899999999999999999999999999999975543 111000001121 2479999999999966666 7
Q ss_pred EEEeeCcccccccccCCCCccCCCCceecCCCC-CChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEc
Q 048438 82 CLWATNPEYLKNKATESKPVVDYKDWQITLSRS-FRSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSGDKRFEVVF 160 (239)
Q Consensus 82 ~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~~~~ 160 (239)
+++. +++.+....... ..+....+.. .....+..+++.+. ..++..++..++++++.+.|++. |++++
T Consensus 256 ~~~~-~~~~~~~l~~~~------~~~~~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~~l~~~L~~~-g~~~~- 324 (401)
T 1fc4_A 256 YTAA-RKEVVEWLRQRS------RPYLFSNSLAPAIVAASIKVLEMVE--AGSELRDRLWANARQFREQMSAA-GFTLA- 324 (401)
T ss_dssp EEEE-CHHHHHHHHHHC------HHHHHSCCCCHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHHHHHHHHT-TCCBC-
T ss_pred EEEc-CHHHHHHHHHhC------cCceeCCCCCHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHc-CCccc-
Confidence 7776 344433221100 0011111111 11122223344321 13566777889999999999987 78766
Q ss_pred CCCeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhcCcEEEEEEE---ECCEeEEEEEecCCCCCc
Q 048438 161 PCHFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINASGKAYMTNVV---LGGIYAIRFATGATLTEE 237 (239)
Q Consensus 161 ~~~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~---~~g~~~lR~~~~~~~t~~ 237 (239)
++..+++.+.+++. .....+.+.|.++|........ ..+..++|+++....|.+
T Consensus 325 ~~~~~~~~~~~~~~-----------------------~~~~~l~~~l~~~gi~v~~~~~~~~~~~~~~iRi~~~~~~~~~ 381 (401)
T 1fc4_A 325 GADHAIIPVMLGDA-----------------------VVAQKFARELQKEGIYVTGFFYPVVPKGQARIRTQMSAAHTPE 381 (401)
T ss_dssp CSSSSEEEEEEECH-----------------------HHHHHHHHHHHHTTEECCEECTTSSCTTCEEEEEECCTTCCHH
T ss_pred CCCCCEEEEEcCCh-----------------------HHHHHHHHHHHHCCcEEeeecCCCCCCCCceEEEEeCCCCCHH
Confidence 56778888887531 1223567777777655433221 123578999987666654
No 58
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=99.60 E-value=9.1e-15 Score=123.64 Aligned_cols=192 Identities=11% Similarity=0.080 Sum_probs=119.3
Q ss_pred CccEEEEEecCCCCcccccC---hhHHHHHHHHhCCEEEEeccccc---ccccCcccccccCCCCCcceEEEcCcccCCC
Q 048438 3 LIPLFLCATIGTTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAG---SACIFPEFRHFIDGVEGADSFSLNAHKWFFA 76 (239)
Q Consensus 3 ~~p~~vv~t~gtt~~G~i~p---l~~i~~i~~~~gi~lhvD~A~~~---~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~ 76 (239)
..|.+|+++.. |.+|.+.| +++|.++|++||+++|+|++|.. +....+. ....-. ..+|++++++||+ ++
T Consensus 144 ~~~~~v~~~~~-~ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~-~~~~~~-~~~d~~~~s~~K~-g~ 219 (359)
T 1svv_A 144 VIPKLVYISNT-TEVGTQYTKQELEDISASCKEHGLYLFLDGARLASALSSPVNDL-TLADIA-RLTDMFYIGATKA-GG 219 (359)
T ss_dssp CEEEEEEEESS-CTTSCCCCHHHHHHHHHHHHHHTCEEEEECTTHHHHHTSTTCCC-CHHHHH-HHCSEEEEECTTT-TC
T ss_pred CCceEEEEEcC-CCCceecCHHHHHHHHHHHHHhCCEEEEEccchhhhhcCCCcch-hhhhhh-hcCCEEEEecccC-CC
Confidence 34677777776 67999998 99999999999999999999933 3322210 100000 1389999999998 56
Q ss_pred cccceEEEeeCcccccccccCCCCccCCCCceecCCCCCChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCCCCe
Q 048438 77 TLDCCCLWATNPEYLKNKATESKPVVDYKDWQITLSRSFRSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSGDKRF 156 (239)
Q Consensus 77 P~g~g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~ 156 (239)
|.|+|+++++ ++.+...... .....+....+.+ .... ....+..+++++..++..++++++.+.| +.+|+
T Consensus 220 ~~~~g~l~~~-~~~~~~~~~~----~~~~~~~~~~~~~-~~~~---~~~~l~~~~~~~~~~~~~~~~~~l~~~L-~~~~~ 289 (359)
T 1svv_A 220 MFGEALIILN-DALKPNARHL----IKQRGALMAKGWL-LGIQ---FEVLMKDNLFFELGAHSNKMAAILKAGL-EACGI 289 (359)
T ss_dssp SSCEEEEECS-GGGCTTHHHH----HHHTTCCCTTTHH-HHHH---HHHHTSTTHHHHHHHHHHHHHHHHHHHH-HHTTC
T ss_pred CCceEEEEEc-ccHHHHHHHH----HhcCCcccccchh-hHHH---HHHHHhhhhHHHHHHHHHHHHHHHHHHh-ccCCe
Confidence 8888988874 3443322110 0000000000000 0111 1223444567778888899999999999 55788
Q ss_pred EEEcCCCeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhc-CcEEEEEEEECCEeEEEEEecCCCC
Q 048438 157 EVVFPCHFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINAS-GKAYMTNVVLGGIYAIRFATGATLT 235 (239)
Q Consensus 157 ~~~~~~~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~g~~~lR~~~~~~~t 235 (239)
+++.+...+++.+.++. .+.++|.++ |.... .....+..++|++++...|
T Consensus 290 ~~~~~~~~~~~~~~~~~----------------------------~~~~~l~~~~gi~v~-~~~~~~~~~iRi~~~~~~~ 340 (359)
T 1svv_A 290 RLAWPSASNQLFPILEN----------------------------TMIAELNNDFDMYTV-EPLKDGTCIMRLCTSWATE 340 (359)
T ss_dssp CBSSCCSSSEECBEEEH----------------------------HHHHHHTTTEECEEE-EEETTTEEEEEEECCTTCC
T ss_pred EEccCCccceEEEEcCH----------------------------HHHHHHHHhcCEEEE-ecccCCCceEEEEccCcCC
Confidence 87766666666655431 566778777 66552 2222467899999665555
Q ss_pred Cc
Q 048438 236 EE 237 (239)
Q Consensus 236 ~~ 237 (239)
.+
T Consensus 341 ~~ 342 (359)
T 1svv_A 341 EK 342 (359)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 59
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.58 E-value=8.1e-15 Score=136.17 Aligned_cols=152 Identities=13% Similarity=0.063 Sum_probs=100.8
Q ss_pred CCccEEEEEecCCCCcccccChhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCC--cce------EEEcCccc
Q 048438 2 GLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEG--ADS------FSLNAHKW 73 (239)
Q Consensus 2 g~~p~~vv~t~gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~--~Ds------~~~~~hK~ 73 (239)
|..|.+|+++.. |.+|.+.|+++|+++|++||+++|||+||+++....+.++. ...+.+ +|+ ++.|+||+
T Consensus 310 ~~~~klvil~~p-n~~G~v~dl~~I~~ia~~~~~~livDeA~~~~~~~~~~~~~-~~~~~g~~aD~~~~~~iv~~S~hK~ 387 (755)
T 2vyc_A 310 GQKPSYCVVTNC-TYDGVCYNAKEAQDLLEKTSDRLHFDEAWYGYARFNPIYAD-HYAMRGEPGDHNGPTVFATHSTHKL 387 (755)
T ss_dssp TCCCSCEEEESS-CTTSEEECHHHHHHHHTTTCSEEEEECTTCTTGGGCGGGTT-SSSSCSCCCCCSSBEEEEEEETTTS
T ss_pred cCCCeEEEEECC-CCCceecCHHHHHHHHHHcCCEEEEECcCchhcccCcccCC-cchhcCCcCCccCCCeEEEECcccc
Confidence 456667777775 68999999999999999999999999999865433332211 011123 677 99999999
Q ss_pred CCCcccceEEEeeCcc-cccccccCCCCccCCCCceecCCCCC--ChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHH
Q 048438 74 FFATLDCCCLWATNPE-YLKNKATESKPVVDYKDWQITLSRSF--RSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLV 150 (239)
Q Consensus 74 l~~P~g~g~l~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l 150 (239)
+++|.++|++++++.. ++...... ... ...+.+.+. ...++-.+++.+..++.++++++..++++++++.|
T Consensus 388 L~g~~~g~~i~~~~~~~~i~~~~~~--~~~----~~~~s~sp~~~~iaal~aA~~~l~~~gg~~~~~~~~~~a~~~r~~L 461 (755)
T 2vyc_A 388 LNALSQASYIHVREGRGAINFSRFN--QAY----MMHATTSPLYAICASNDVAVSMMDGNSGLSLTQEVIDEAVDFRQAM 461 (755)
T ss_dssp SSCCTTCEEEEEECCBTCCCHHHHH--HHH----HHTSCSSCCHHHHHHHHHHHHHHSTHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCcCCeeeeeecCcccccCHHHHH--HHH----HHhCCCCHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH
Confidence 9999999999886541 22100000 000 011111221 12334445666655655778899999999999999
Q ss_pred hCCCC---------eEEEcC
Q 048438 151 SGDKR---------FEVVFP 161 (239)
Q Consensus 151 ~~~~g---------~~~~~~ 161 (239)
+++++ ++++.+
T Consensus 462 ~~l~~~~~~~~~~~~~~~~~ 481 (755)
T 2vyc_A 462 ARLYKEFTADGSWFFKPWNK 481 (755)
T ss_dssp HHHHHHHHTTTCCCCEESSC
T ss_pred HhccccccccccceeeccCc
Confidence 98877 877765
No 60
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=99.57 E-value=1.2e-14 Score=125.24 Aligned_cols=192 Identities=15% Similarity=0.084 Sum_probs=120.5
Q ss_pred EEEEEecCCCCcccccChhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCcccceEEEe
Q 048438 6 LFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLWA 85 (239)
Q Consensus 6 ~~vv~t~gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~ 85 (239)
-+|++ .++..|.+.|+++|.++|++||+++++|++|+.|........ ..++.+|+++.++||++.+|.+ |++++
T Consensus 165 ~~v~~--~~p~~~~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~---~~~~~~di~~~s~sK~l~g~~~-G~~~~ 238 (407)
T 2dkj_A 165 KVIVA--GASAYPRFWDFKAFREIADEVGAYLVVDMAHFAGLVAAGLHP---NPLPYAHVVTSTTHKTLRGPRG-GLILS 238 (407)
T ss_dssp SEEEE--CCSSCCSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTCSC---CCTTTCSEEEEESSGGGCCCSC-EEEEE
T ss_pred eEEEE--eccccCCCCCHHHHHHHHHHcCCEEEEEccccccccccCccC---CccccccEEEEeccccCCCCCc-eEEEE
Confidence 34444 333446889999999999999999999999988655433211 1122489999999999998887 88887
Q ss_pred eCcccccccccCCCCccCCCCceecCCCCC-ChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEcC-CC
Q 048438 86 TNPEYLKNKATESKPVVDYKDWQITLSRSF-RSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSGDKRFEVVFP-CH 163 (239)
Q Consensus 86 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~~~~~-~~ 163 (239)
++++......... ..+.. .+... ....+..+++.+..+++++..++..++++++.+.|++. |++++.+ ..
T Consensus 239 ~~~~~~~~l~~~~------~~~~~-~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~ 310 (407)
T 2dkj_A 239 NDPELGKRIDKLI------FPGIQ-GGPLEHVIAGKAVAFFEALQPEFKEYSRLVVENAKRLAEELARR-GYRIVTGGTD 310 (407)
T ss_dssp SCHHHHHHHHHHH------TTTTC-SSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCS
T ss_pred CCHHHHHHHHhhh------ccccc-CCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhC-CceeecCCCC
Confidence 6444433221100 00100 01111 11233445554433577888888999999999999987 8988764 46
Q ss_pred eeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhcCcEEEEEEE------ECCEeEEEEEecCC
Q 048438 164 FAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINASGKAYMTNVV------LGGIYAIRFATGAT 233 (239)
Q Consensus 164 ~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~------~~g~~~lR~~~~~~ 233 (239)
.+++++.++..+. + ...+.+.|.++|........ .....++|+++..+
T Consensus 311 ~~~~~~~~~~~~~---------------~-------~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~iRis~~~~ 364 (407)
T 2dkj_A 311 NHLFLVDLRPKGL---------------T-------GKEAEERLDAVGITVNKNAIPFDPKPPRVTSGIRIGTPAI 364 (407)
T ss_dssp SSEEEEECGGGTC---------------C-------HHHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEEECHHH
T ss_pred ceEEEEECcccCC---------------C-------HHHHHHHHHHcCceecCCcCccccccccCCCceeeecccc
Confidence 7788888864211 0 12456667666655443221 11245799998654
No 61
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.56 E-value=1.2e-14 Score=123.79 Aligned_cols=149 Identities=13% Similarity=0.110 Sum_probs=90.4
Q ss_pred cEEEEEecCCCCcccccChhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCcccceEEE
Q 048438 5 PLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLW 84 (239)
Q Consensus 5 p~~vv~t~gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~ 84 (239)
+.+|+.++. +|.+.|+++|.++|++||+++++|++|+.+..... + .+..+..+++.++++||++ +| |.|.++
T Consensus 122 ~~~v~~~~~---tG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~--~-~~~~~~~i~~~s~s~~K~~-~~-g~g~~~ 193 (375)
T 2fnu_A 122 TKAIVSVDY---AGKSVEVESVQKLCKKHSLSFLSDSSHALGSEYQN--K-KVGGFALASVFSFHAIKPI-TT-AEGGAV 193 (375)
T ss_dssp EEEEEEECG---GGCCCCHHHHHHHHHHHTCEEEEECTTCTTCEETT--E-ETTSSSSEEEEECCTTSSS-CC-SSCEEE
T ss_pred ceEEEEeCC---cCCccCHHHHHHHHHHcCCEEEEECccccCCeECC--e-eccccCCeEEEeCCCCCCc-cc-cCceEE
Confidence 344555544 89999999999999999999999999988765422 1 1222223777788888997 56 889888
Q ss_pred ee-Cccccccccc-CCCCccCCCCceec---CCCCCChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEE
Q 048438 85 AT-NPEYLKNKAT-ESKPVVDYKDWQIT---LSRSFRSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSGDKRFEVV 159 (239)
Q Consensus 85 ~~-~~~~l~~~~~-~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~~~ 159 (239)
+. +++....... ......+...+.++ .+.++....+..++.....+.++++.++..++++++.+.|++++++++.
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 273 (375)
T 2fnu_A 194 VTNDSELHEKMKLFRSHGMLKKDFFEGEVKSIGHNFRLNEIQSALGLSQLKKAPFLMQKREEAALTYDRIFKDNPYFTPL 273 (375)
T ss_dssp EESCHHHHHHHHHHTBTTEEESSSSCEEESSCCCBCCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTCSSEEES
T ss_pred EeCCHHHHHHHHHHHhcCCccccccccccccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccc
Confidence 84 3433221110 00000000011111 1111122222222222224566788888899999999999998899887
Q ss_pred cC
Q 048438 160 FP 161 (239)
Q Consensus 160 ~~ 161 (239)
.+
T Consensus 274 ~~ 275 (375)
T 2fnu_A 274 HP 275 (375)
T ss_dssp GG
T ss_pred CC
Confidence 54
No 62
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=99.55 E-value=5.1e-14 Score=124.75 Aligned_cols=156 Identities=10% Similarity=0.043 Sum_probs=97.5
Q ss_pred CCCCcccccChhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCcccceEEEeeCccccc
Q 048438 13 GTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLWATNPEYLK 92 (239)
Q Consensus 13 gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~~l~ 92 (239)
+.+..|...|+++|+++|++||+++|+|+||+.+.+........+. .+|++++++||+|++|.| |+++.++. ...
T Consensus 210 ~~s~~~~~~dl~~i~~ia~~~g~~livD~Ah~~glv~~g~~~~~~~---~aDiv~~S~hK~l~Gp~G-G~i~~~~~-~~~ 284 (490)
T 2a7v_A 210 GTSAYARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFK---HADIVTTTTHKTLRGARS-GLIFYRKG-VKA 284 (490)
T ss_dssp CCSSCCSCCCHHHHHHHHHHTTCEEEEECGGGHHHHHTTSSCCGGG---TCSEEEEESSGGGCSCSC-EEEEEECS-EEE
T ss_pred cCCCCCCcccHHHHHHHHHHcCCEEEEccccccccccCCcCCCCCC---CCCEEEECCcccCccccc-hheeeccc-hhc
Confidence 4455678889999999999999999999999876543221111122 499999999999999987 77777653 110
Q ss_pred --c-----cccCCCCccCCC-CceecCCCCCC-hHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEcC-C
Q 048438 93 --N-----KATESKPVVDYK-DWQITLSRSFR-SLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSGDKRFEVVFP-C 162 (239)
Q Consensus 93 --~-----~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~~~~~-~ 162 (239)
. ........++.. ....+++.... ..++..+++..-.+.++++.++..++++++.+.|.+. |++++.+ .
T Consensus 285 ~~~~~~~~~~~~l~~~i~~~~~~g~qggp~~~~iaAla~Al~~~~~~~~~~~~~~~~~na~~L~~~L~~~-G~~v~~~~t 363 (490)
T 2a7v_A 285 VDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADALLER-GYSLVSGGT 363 (490)
T ss_dssp EETTTEEEEECCCHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSC
T ss_pred ccccccchhhHHHHHHHHHHhcccCCCCchHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHc-CcEEecCCC
Confidence 0 000000000000 00011111111 2233334444323456778888999999999999986 9998753 4
Q ss_pred CeeEEEEEEcCC
Q 048438 163 HFAVVCFRVSPL 174 (239)
Q Consensus 163 ~~~iv~f~~~~~ 174 (239)
+++++.+.+.+.
T Consensus 364 ~t~lv~vdl~~~ 375 (490)
T 2a7v_A 364 DNHLVLVDLRPK 375 (490)
T ss_dssp SSSEEEEECTTT
T ss_pred CCeEEEEEeCCC
Confidence 577888887654
No 63
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=99.53 E-value=1.5e-14 Score=122.63 Aligned_cols=194 Identities=11% Similarity=0.040 Sum_probs=118.9
Q ss_pred ccEEEEEecCCCCcccccChhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCcccceEE
Q 048438 4 IPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCL 83 (239)
Q Consensus 4 ~p~~vv~t~gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l 83 (239)
.+-+|+.++.+|.+|.+.| +| +++||+++++|++|+.+..+.+ +.. .|++++++||+++ |.|+|++
T Consensus 141 ~~k~v~~~~~~nptG~~~~--~i---~~~~~~~li~D~a~~~~~~~~~-----~~~---~di~~~s~sK~~~-~~G~G~~ 206 (360)
T 1w23_A 141 NDAYLHITSNNTIYGTQYQ--NF---PEINHAPLIADMSSDILSRPLK-----VNQ---FGMIYAGAQKNLG-PSGVTVV 206 (360)
T ss_dssp TEEEEEEESEETTTTEECS--SC---CCCCSSCEEEECTTTTTSSCCC-----GGG---CSEEEEETTTTTS-CTTCEEE
T ss_pred CCCEEEEeCCCCCcceecc--cc---cccCCceEEEechhhcCCCCcC-----ccc---CCEEEEEcccccC-CCCcEEE
Confidence 3667888888999999865 33 3389999999999998766543 222 4899999999875 7799999
Q ss_pred EeeCcccccccccCCCCccCCCC---ceecCCCC--CChHHHHHHHHHhCHH-HHHHHHHHHHHHHHHHHHHHhCCCCe-
Q 048438 84 WATNPEYLKNKATESKPVVDYKD---WQITLSRS--FRSLKLWFVIRNYGME-NLRHFLRSHVNMARLFERLVSGDKRF- 156 (239)
Q Consensus 84 ~~~~~~~l~~~~~~~~~~~~~~~---~~~~~~~~--~~~~~~~~~l~~~g~~-g~~~~~~~~~~la~~l~~~l~~~~g~- 156 (239)
++++ +.+.......+...+... .....+.. ...+.+..+++.+... +++++.++..++++++.+.|++++++
T Consensus 207 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 285 (360)
T 1w23_A 207 IVKK-DLLNTKVEQVPTMLQYATHIKSDSLYNTPPTFSIYMLRNVLDWIKDLGGAEAIAKQNEEKAKIIYDTIDESNGFY 285 (360)
T ss_dssp EEEH-HHHCSCCTTCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTTTTSS
T ss_pred EEcH-HHHhhcccCCcchhhhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHccCcc
Confidence 9864 333322111001110000 00001111 1113344455554334 67888889999999999999998665
Q ss_pred EEEcCC--Cee-EEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhcCcEEEEEEEECCEeEEEEEecCC
Q 048438 157 EVVFPC--HFA-VVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINASGKAYMTNVVLGGIYAIRFATGAT 233 (239)
Q Consensus 157 ~~~~~~--~~~-iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~ 233 (239)
....++ ..+ ++.|.+++. .....+.+.|.++|....... ....++|++++..
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~l~~~gi~~~~~~--~~~~~iRis~~~~ 340 (360)
T 1w23_A 286 VGHAEKGSRSLMNVTFNLRNE-----------------------ELNQQFLAKAKEQGFVGLNGH--RSVGGCRASIYNA 340 (360)
T ss_dssp EESSCGGGBCSSEEEEECSSH-----------------------HHHHHHHHHHHHTTEESCBCC--TTTCSEEEECCTT
T ss_pred cccCCchhccCcEEEEEcCCC-----------------------ccHHHHHHHHHHCCeeeecCC--CCCCeEEEEecCC
Confidence 554222 345 888887531 112356666776665543211 1135799999877
Q ss_pred CCCc
Q 048438 234 LTEE 237 (239)
Q Consensus 234 ~t~~ 237 (239)
+|.+
T Consensus 341 ~~~~ 344 (360)
T 1w23_A 341 VPID 344 (360)
T ss_dssp SCHH
T ss_pred CCHH
Confidence 6654
No 64
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=99.53 E-value=4.5e-14 Score=121.54 Aligned_cols=185 Identities=12% Similarity=0.082 Sum_probs=116.2
Q ss_pred CCCcccccChhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCcccceEEEeeCcccccc
Q 048438 14 TTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLWATNPEYLKN 93 (239)
Q Consensus 14 tt~~G~i~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~~l~~ 93 (239)
.+..|...|+++|.++|++||+++++|++|+.+....+... ..+..+|+++.++||++++|.| |+++++ ++....
T Consensus 171 ~~~~~~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~---~~~~~~di~~~s~sK~~~g~~g-G~~~~~-~~~~~~ 245 (405)
T 2vi8_A 171 AAAYPRIIDFAKFREIADEVGAYLMVDMAHIAGLVAAGLHP---NPVPYAHFVTTTTHKTLRGPRG-GMILCQ-EQFAKQ 245 (405)
T ss_dssp CSSCCSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSC---CSTTTCSEEEEESSSTTCCCSC-EEEEEC-HHHHHH
T ss_pred CCCCCccCCHHHHHHHHHHcCCEEEEEccccccccccCcCC---CccccCCEEEEeccccCCCCCC-eEEEEc-HHHHHH
Confidence 35568888999999999999999999999986654332111 1122489999999999988888 888875 443322
Q ss_pred cccCCCCccCCCCceecCCCCC-ChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEcC-CCeeEEEEEE
Q 048438 94 KATESKPVVDYKDWQITLSRSF-RSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSGDKRFEVVFP-CHFAVVCFRV 171 (239)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~~~~~-~~~~iv~f~~ 171 (239)
..... ..+.. ++... ....+..+++.+..+++++..++..++++++.+.|++. |++++.+ ...+++.+.+
T Consensus 246 l~~~~------~~~~~-~~~~~~~~aa~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~ 317 (405)
T 2vi8_A 246 IDKAI------FPGIQ-GGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKRLASALQNE-GFTLVSGGTDNHLLLVDL 317 (405)
T ss_dssp HHHHH------TTTTC-SSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEEC
T ss_pred HHhhh------ccccc-CCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCCceEEEEEc
Confidence 11100 00110 11111 12233344554333567888888999999999999987 8998765 3577888887
Q ss_pred cCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhcCcEEEEEE------EECCEeEEEEEecCC
Q 048438 172 SPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINASGKAYMTNV------VLGGIYAIRFATGAT 233 (239)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~------~~~g~~~lR~~~~~~ 233 (239)
+..+. + ...+.+.|.++|....... ...+...+|+++..+
T Consensus 318 ~~~~~---------------~-------~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~iRis~~~~ 363 (405)
T 2vi8_A 318 RPQQL---------------T-------GKTAEKVLDEVGITVNKNTIPYDPESPFVTSGIRIGTAAV 363 (405)
T ss_dssp GGGTC---------------C-------HHHHHHHHHHHTEECEEECCTTCSSCTTTCSEEEEECHHH
T ss_pred cCCCC---------------C-------HHHHHHHHHHcCceeccCcCccccCCCCCCCceEEeeeee
Confidence 64211 0 1245556666665544322 011235799998763
No 65
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=99.53 E-value=1e-13 Score=118.63 Aligned_cols=195 Identities=13% Similarity=0.042 Sum_probs=122.3
Q ss_pred cEEEEEecCCCCcccccChhHHHHHHHHhCCEEEEecccccccccCccccc--ccCCCCCcceEEEcCcccCCCcccceE
Q 048438 5 PLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRH--FIDGVEGADSFSLNAHKWFFATLDCCC 82 (239)
Q Consensus 5 p~~vv~t~gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~--~~~~~~~~Ds~~~~~hK~l~~P~g~g~ 82 (239)
+.+|+....++.+|.+.|+++|.++|++||+++++|++|+.+...- .... ...+. ..|+++.++||+++ |.| |+
T Consensus 169 ~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~-~~~~~~~~~~~-~~di~~~s~sK~~~-~~G-G~ 244 (384)
T 1bs0_A 169 QQMVVTEGVFSMDGDSAPLAEIQQVTQQHNGWLMVDDAHGTGVIGE-QGRGSCWLQKV-KPELLVVTFGKGFG-VSG-AA 244 (384)
T ss_dssp CEEEEEESBCTTTCCBCCHHHHHHHHHHTTCEEEEECTTTTTTSSG-GGCCHHHHTTC-CCSEEEEESSSTTS-SCC-EE
T ss_pred CeEEEEeCCCCCCCCccCHHHHHHHHHHcCcEEEEECCcccceecC-CCCchHHhcCC-CCcEEEeeccchhh-ccC-cE
Confidence 5677777788999999999999999999999999999998664320 0000 01122 48999999999986 666 87
Q ss_pred EEeeCcccccccccCCCCccCCCCceecCCCCCChH---HHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEE
Q 048438 83 LWATNPEYLKNKATESKPVVDYKDWQITLSRSFRSL---KLWFVIRNYGMENLRHFLRSHVNMARLFERLVSGDKRFEVV 159 (239)
Q Consensus 83 l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~~~ 159 (239)
++.+ ++.+....... ..+. .+.....+ .+..+++.+.....++..++..++++++.+.|++. ++++.
T Consensus 245 ~~~~-~~~~~~l~~~~------~~~~--~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~ 314 (384)
T 1bs0_A 245 VLCS-STVADYLLQFA------RHLI--YSTSMPPAQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQDL-PFTLA 314 (384)
T ss_dssp EEEC-HHHHHHHHHHC------HHHH--SSBCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTS-SCEEC
T ss_pred EEeC-HHHHHHHHHhc------hhhh--cCCCCCHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhc-CCccc
Confidence 7774 44433221100 0011 11111222 22334444321144577788889999999999987 78875
Q ss_pred cCCCeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhcCcEEEEEEE---ECCEeEEEEEecCCCCC
Q 048438 160 FPCHFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINASGKAYMTNVV---LGGIYAIRFATGATLTE 236 (239)
Q Consensus 160 ~~~~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~---~~g~~~lR~~~~~~~t~ 236 (239)
++..+++.+.++.. .....+.+.|.++|........ ..+..++|++++..+|.
T Consensus 315 -~~~~~~~~~~~~~~-----------------------~~~~~l~~~l~~~gi~v~~~~~~~~~~~~~~~Ri~~~~~~~~ 370 (384)
T 1bs0_A 315 -DSCSAIQPLIVGDN-----------------------SRALQLAEKLRQQGCWVTAIRPPTVPAGTARLRLTLTAAHEM 370 (384)
T ss_dssp -SCCSSBCCEEEESH-----------------------HHHHHHHHHHHHTTEECCEECTTSSCTTCEEECCBCCTTCCH
T ss_pred -CCCCCEEEEEeCCH-----------------------HHHHHHHHHHHHCCcEEEeecCCCCCCCCceEEEEEcCCCCH
Confidence 45567777777531 1223667777777654433221 12457899998866555
Q ss_pred c
Q 048438 237 E 237 (239)
Q Consensus 237 ~ 237 (239)
+
T Consensus 371 ~ 371 (384)
T 1bs0_A 371 Q 371 (384)
T ss_dssp H
T ss_pred H
Confidence 4
No 66
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=99.53 E-value=1.7e-13 Score=116.23 Aligned_cols=195 Identities=11% Similarity=0.008 Sum_probs=115.4
Q ss_pred cEEEEEecCCCCc-ccccChhHH---HHHHHHhCCEEEEecccccccccCc--ccccccCCCCCcceEEEcCcccCCCcc
Q 048438 5 PLFLCATIGTTAI-TAVDPLKPL---CDVAKQFGIWVHVDAAYAGSACIFP--EFRHFIDGVEGADSFSLNAHKWFFATL 78 (239)
Q Consensus 5 p~~vv~t~gtt~~-G~i~pl~~i---~~i~~~~gi~lhvD~A~~~~~~~~~--~~~~~~~~~~~~Ds~~~~~hK~l~~P~ 78 (239)
+-+|+++..++.+ |.+.|++++ +++|++||+++|+|+||..+..... ...... ..+|++++++||++++|.
T Consensus 138 ~~~v~~~~p~n~~~G~~~~~~~l~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~---~~~d~~~~s~sK~~~~~~ 214 (359)
T 3pj0_A 138 VSSVLIELPQREIGGQLPAFEELEKISEYCHEQGISLHLDGARLWEITPFYQKSAEEIC---ALFDSVYVSFYKGIGGIA 214 (359)
T ss_dssp CSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHHTCEEEEEETTCGGGHHHHTCCHHHHH---TTCSEEEEESSSTTCCSS
T ss_pred ceEEEEEecccCCCcccCCHHHHHHHHHHHHHcCCEEEEECcchhcchhhhCCCHHHhh---ccCCEEEEeccccCCCcc
Confidence 3455555555555 788776665 9999999999999999865542111 111112 248999999999999886
Q ss_pred cceEEEeeCcccccccccCCCCccCCCCceecCCCCCChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCCCCeEE
Q 048438 79 DCCCLWATNPEYLKNKATESKPVVDYKDWQITLSRSFRSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSGDKRFEV 158 (239)
Q Consensus 79 g~g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~~ 158 (239)
| |+++. +++++....... .......+. ....+.....+++. ..+++++..++++++.+.|++++|+++
T Consensus 215 g-g~~~~-~~~l~~~~~~~~-~~~~~~~~~----~~~~~~a~~~~l~~-----~~~~~~~~~~~~~~l~~~L~~~~g~~~ 282 (359)
T 3pj0_A 215 G-AILAG-NDDFVQEAKIWK-RRYGGDLIS----LYPYILSADYYFEK-----RIGKMAEYFEAAKGLAERFNSCSGVKT 282 (359)
T ss_dssp C-EEEEE-CHHHHHHHHHHH-HHTTCCCSC----CHHHHHHHHHHHHH-----HGGGHHHHHHHHHHHHHHHHTSTTEEE
T ss_pred e-EEEEC-CHHHHHHHHHHH-HHhCCCcch----hHHHHHHHHHHHHH-----HHHHhHHHHHHHHHHHHHHhhCCCcee
Confidence 6 55544 444433221000 000000000 00001111122222 124555667888999999999999998
Q ss_pred E-cCCCeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhcCcEEEEEE--EECCEeEEEEEecCCCC
Q 048438 159 V-FPCHFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINASGKAYMTNV--VLGGIYAIRFATGATLT 235 (239)
Q Consensus 159 ~-~~~~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~--~~~g~~~lR~~~~~~~t 235 (239)
. .++..+.+.++++... ......+.+.|.++|..+.... ...+..++|+++....+
T Consensus 283 ~~~~~~~~~~~~~~~~~~---------------------~~~~~~l~~~l~~~GV~v~~g~~~~~~~~~~~r~~i~~~~~ 341 (359)
T 3pj0_A 283 VPEVPVSNMFHVYFENSA---------------------DEIGAILTKIQDETGVGISGYLQEKSADVCAFEVSVGDAFA 341 (359)
T ss_dssp ESSSCSSSEEEEEESSCH---------------------HHHHHHHHHHHHHHCEECCSCCEEEETTEEEEEEECCTTGG
T ss_pred eccCCcceEEEEEecCcc---------------------chhHHHHHHHHHhcCcEecCCccccCCCceEEEEEecCccc
Confidence 6 5677888888886531 1122366677777776644332 23578899999875543
No 67
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=99.53 E-value=1.1e-13 Score=117.29 Aligned_cols=190 Identities=9% Similarity=0.045 Sum_probs=114.9
Q ss_pred EEEEecCCCCc-ccccC---hhHHHHHHHHhCCEEEEecccccccccC--cccccccCCCCCcceEEEcCcccCCCcccc
Q 048438 7 FLCATIGTTAI-TAVDP---LKPLCDVAKQFGIWVHVDAAYAGSACIF--PEFRHFIDGVEGADSFSLNAHKWFFATLDC 80 (239)
Q Consensus 7 ~vv~t~gtt~~-G~i~p---l~~i~~i~~~~gi~lhvD~A~~~~~~~~--~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~ 80 (239)
+|+++..++.+ |.+.| +++|+++|++||+++|+|+||+.+.... ....... ..+|+++.++||++++|.|
T Consensus 138 ~v~~~~p~np~~G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~---~~~d~~~~s~sK~~~~~~g- 213 (357)
T 3lws_A 138 CLLLELPQREIGGVAPAFSELETISRYCRERGIRLHLDGARLFEMLPYYEKTAAEIA---GLFDSIYISFYKGLGGIAG- 213 (357)
T ss_dssp EEEEESSBGGGTSBCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCHHHHH---TTSSEEEEESSSTTCCSSC-
T ss_pred eEEEEcccccCCceeCCHHHHHHHHHHHHHcCCEEEEECchhhhhhhhcCCChHHHH---hcCCEEEEeccccCCCCce-
Confidence 45556666665 88776 8999999999999999999986322111 1111111 2489999999999988987
Q ss_pred eEEEeeCcccccccccCCCCccCCCCceecCCCC-CCh--HHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCCCCeE
Q 048438 81 CCLWATNPEYLKNKATESKPVVDYKDWQITLSRS-FRS--LKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSGDKRFE 157 (239)
Q Consensus 81 g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~ 157 (239)
|+++. +++++....... .....+.. ... .....+++. ..+++++..+.++++.+.|++++|++
T Consensus 214 g~~~~-~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~l~~-----~~~~~~~~~~~~~~l~~~L~~~~g~~ 279 (357)
T 3lws_A 214 AILAG-PAAFCQTARIWK--------RRYGGDLISLYPYIVSADYYYEL-----RKDRMGQYYEQAKQLAEQFNALPGVH 279 (357)
T ss_dssp EEEEE-CHHHHHHHHHHH--------HHTTCCCSCCHHHHHHHHHHHHH-----HTTCHHHHHHHHHHHHHHHHTSTTEE
T ss_pred EEEEc-CHHHHHHHHHHH--------HHhcCCcccchHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhCCCCe
Confidence 66654 444443321000 00000001 111 111122222 33444556778889999999999999
Q ss_pred EE-cCCCeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhcCcEEEEEEE-ECCEeEEEEEecCCCC
Q 048438 158 VV-FPCHFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINASGKAYMTNVV-LGGIYAIRFATGATLT 235 (239)
Q Consensus 158 ~~-~~~~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~-~~g~~~lR~~~~~~~t 235 (239)
+. .++..+++.++++... ......+.+.|.++|..+..... ..+..++|+++...++
T Consensus 280 ~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~l~~~Gi~v~~g~~~~~~~~~~r~~i~~~~~ 338 (357)
T 3lws_A 280 TTPEVPVSNMFHLHFDGQA---------------------ADISPKLEQVQEETGLGFVGYLVDKDGYCSTEISVGDAYG 338 (357)
T ss_dssp EESSSCSSSEEEEEEESCH---------------------HHHHHHHHHHHHHHCEESCSCCEECSSEEEEEEEBCTTGG
T ss_pred eccCCCcceEEEEEecCCh---------------------HHHHHHHHHHHHhcCeEEecccccCCCceEEEEEecchhh
Confidence 85 5678899999887531 11123566677777765443211 1477899999886653
No 68
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=99.52 E-value=6.3e-14 Score=121.06 Aligned_cols=151 Identities=13% Similarity=0.163 Sum_probs=99.3
Q ss_pred ccEEEEEecCCCCcccccChhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCccc--ce
Q 048438 4 IPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATLD--CC 81 (239)
Q Consensus 4 ~p~~vv~t~gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g--~g 81 (239)
.+.+|+++..+|.+|.+.|+++|+++|+++|+++|+|++|+.+....+ +. . ++|+++.++||++++|.+ .|
T Consensus 150 ~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~~~~~~~-----~~-~-~~d~~~~S~sK~~~~~~~~~~G 222 (398)
T 1gc0_A 150 ATRVIYFESPANPNMHMADIAGVAKIARKHGATVVVDNTYCTPYLQRP-----LE-L-GADLVVHSATKYLSGHGDITAG 222 (398)
T ss_dssp TEEEEEEESSCTTTCCCCCHHHHHHHHGGGTCEEEEECTTTHHHHCCG-----GG-G-TCSEEEEETTTTTTCSSSCCCE
T ss_pred CCeEEEEECCCCCCcccccHHHHHHHHHHcCCEEEEECCCcccccCCc-----hh-h-CceEEEECCccccCCCCCCeEE
Confidence 356788889999999999999999999999999999999997765332 11 1 399999999999998876 68
Q ss_pred EEEeeCcccccccccCCCCccCCCCceec-CCCCCChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCCCCeE---
Q 048438 82 CLWATNPEYLKNKATESKPVVDYKDWQIT-LSRSFRSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSGDKRFE--- 157 (239)
Q Consensus 82 ~l~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~--- 157 (239)
+++.++ +.+...... .... .+.....+..|.+++.+ +.+..+.++..+.++++.+.|++.++++
T Consensus 223 ~l~~~~-~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~l~~~L~~~~~v~~v~ 290 (398)
T 1gc0_A 223 IVVGSQ-ALVDRIRLQ---------GLKDMTGAVLSPHDAALLMRGI--KTLNLRMDRHCANAQVLAEFLARQPQVELIH 290 (398)
T ss_dssp EEEECH-HHHHHHHHT---------HHHHHTCCCCCHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHHTCTTEEEEE
T ss_pred EEEECh-HHHHHHHHH---------HhhccCCCCCCHHHHHHHHhcc--chHHHHHHHHHHHHHHHHHHHhcCCCeeEEE
Confidence 877653 333211100 0000 11112234445444433 2345566667777888888887765543
Q ss_pred -----------EEcC---CCeeEEEEEEcC
Q 048438 158 -----------VVFP---CHFAVVCFRVSP 173 (239)
Q Consensus 158 -----------~~~~---~~~~iv~f~~~~ 173 (239)
+..+ ...++++|.+++
T Consensus 291 ~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~ 320 (398)
T 1gc0_A 291 YPGLASFPQYTLARQQMSQPGGMIAFELKG 320 (398)
T ss_dssp EC----------------CCTTEEEEEETT
T ss_pred CCCCCCCcCHHHHHhhCCCCceEEEEEECC
Confidence 2221 246799998864
No 69
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=99.52 E-value=4.9e-14 Score=121.44 Aligned_cols=199 Identities=13% Similarity=0.082 Sum_probs=125.7
Q ss_pred ccEEEEEecCCCCcccccChhHHHHHHHHhCCEEEEecccccccccCcccccc--cCCC-CCcceEEEcCcccCCCcccc
Q 048438 4 IPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHF--IDGV-EGADSFSLNAHKWFFATLDC 80 (239)
Q Consensus 4 ~p~~vv~t~gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~--~~~~-~~~Ds~~~~~hK~l~~P~g~ 80 (239)
.+.+|++++.+|.+|.+.|+++|.++|++||+++++|++|+.+.+- +..... ..++ +..|.+..+++|+++.|.
T Consensus 178 ~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~-~~g~~~~~~~~~~~~~~i~~~s~sK~~~~~G-- 254 (401)
T 2bwn_A 178 APKLIAFESVYSMDGDFGPIKEICDIAEEFGALTYIDEVHAVGMYG-PRGAGVAERDGLMHRIDIFNGTLAKAYGVFG-- 254 (401)
T ss_dssp SCEEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSS-TTSCCHHHHHTCGGGCSEEEEESSSTTCSCC--
T ss_pred CceEEEEecCcCCCCCcCCHHHHHHHHHHcCCEEEEeccccccccC-CCCceeeeccCccccCcEEEeechhhccCCC--
Confidence 4678899999999999999999999999999999999999965331 111111 1121 236889999999988653
Q ss_pred eEEEeeCcccccccccCCCCccCCCCceecCCCC-CChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEE
Q 048438 81 CCLWATNPEYLKNKATESKPVVDYKDWQITLSRS-FRSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSGDKRFEVV 159 (239)
Q Consensus 81 g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~~~ 159 (239)
|++.. ++++........ ..+....+.. .....+..+++.+...++++..++..++++++.+.|++. |++++
T Consensus 255 G~~~~-~~~~~~~l~~~~------~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~ 326 (401)
T 2bwn_A 255 GYIAA-SARMVDAVRSYA------PGFIFSTSLPPAIAAGAQASIAFLKTAEGQKLRDAQQMHAKVLKMRLKAL-GMPII 326 (401)
T ss_dssp EEEEE-CHHHHHHHHHHC------HHHHTSBCCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHH-TCCBC
T ss_pred CEEec-CHHHHHHHHHhC------cCceecCCCCHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHC-CCccc
Confidence 65554 333322111000 0011111111 222344456666655566788888899999999999987 88776
Q ss_pred cCCCeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHH-hcCcEEEEEEE---ECCEeEEEEEecCCCC
Q 048438 160 FPCHFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESIN-ASGKAYMTNVV---LGGIYAIRFATGATLT 235 (239)
Q Consensus 160 ~~~~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~---~~g~~~lR~~~~~~~t 235 (239)
. ++.++++|.++.. .....+.+.|. +.|........ ..|..++|++++..+|
T Consensus 327 ~-~~~~~~~~~~~~~-----------------------~~~~~~~~~L~~~~gi~v~~~~~~~~~~~~~~iRis~~~~~t 382 (401)
T 2bwn_A 327 D-HGSHIVPVVIGDP-----------------------VHTKAVSDMLLSDYGVYVQPINFPTVPRGTERLRFTPSPVHD 382 (401)
T ss_dssp C-CSSSCEEEECCCH-----------------------HHHHHHHHHHHHHHCEECCEECTTTSCTTCCEEEECCCTTSC
T ss_pred C-CCCCeEEEEeCCh-----------------------HHHHHHHHHHHhcCCEEEeecCCCCCCCCCceEEEEeeCCCC
Confidence 4 4567888887531 11235666775 45654432221 1244689999987766
Q ss_pred Cc
Q 048438 236 EE 237 (239)
Q Consensus 236 ~~ 237 (239)
.+
T Consensus 383 ~~ 384 (401)
T 2bwn_A 383 LK 384 (401)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 70
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=99.51 E-value=8.3e-14 Score=119.85 Aligned_cols=197 Identities=14% Similarity=0.042 Sum_probs=122.4
Q ss_pred ccEEEEEecCCCCcccccChhHHHHHHHHhCCEEEEecccccccccCcccccc--cCCC-CCcceEEEcCcccCCCcccc
Q 048438 4 IPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHF--IDGV-EGADSFSLNAHKWFFATLDC 80 (239)
Q Consensus 4 ~p~~vv~t~gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~--~~~~-~~~Ds~~~~~hK~l~~P~g~ 80 (239)
.+.+|+.+...|.+|.+.|+++|.++|++||+++++|++|+.+...- ..... ..++ +.+|+++.++||+++ |.|
T Consensus 173 ~~~~v~~~~~~nptG~~~~~~~l~~~~~~~~~~li~De~~~~~~~~~-~~~~~~~~~~~~~~~di~~~s~sK~~~-~~G- 249 (398)
T 3a2b_A 173 SAKLICTDGIFSMEGDIVNLPELTSIANEFDAAVMVDDAHSLGVIGH-KGAGTASHFGLNDDVDLIMGTFSKSLA-SLG- 249 (398)
T ss_dssp SCEEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSSG-GGCCHHHHHTCGGGCSEEEEESSSTTC-SSC-
T ss_pred CceEEEEeCCCCCCCCccCHHHHHHHHHHcCcEEEEECCCcccccCC-CCCchHhhcCCCcCCeEEEeccccccc-CCC-
Confidence 46677788888999999999999999999999999999998664311 00111 1122 137999999999986 767
Q ss_pred eEEEeeCcccccccccCCCCccCCCCceecCCCCCChH-HHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEE
Q 048438 81 CCLWATNPEYLKNKATESKPVVDYKDWQITLSRSFRSL-KLWFVIRNYGMENLRHFLRSHVNMARLFERLVSGDKRFEVV 159 (239)
Q Consensus 81 g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~~~ 159 (239)
|+++.+ ++.+....... ..+........... ....+++.+ +.+++..++..++.+++.+.|++. |++++
T Consensus 250 G~~~~~-~~~~~~l~~~~------~~~~~~~~~~~~~~a~~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~ 319 (398)
T 3a2b_A 250 GFVAGD-ADVIDFLKHNA------RSVMFSASMTPASVASTLKALEII--QNEPEHIEKLWKNTDYAKAQLLDH-GFDLG 319 (398)
T ss_dssp EEEEEC-HHHHHHHHHHC------HHHHSSBCCCHHHHHHHHHHHHHH--HHCTHHHHHHHHHHHHHHHHHHHT-TCCBC
T ss_pred cEEEeC-HHHHHHHHHhc------ccceecCCCCHHHHHHHHHHHHHH--hhCHHHHHHHHHHHHHHHHHHHhc-CCCcC
Confidence 887764 44333221100 00000011111111 223344442 234566777888999999999987 88765
Q ss_pred cCCCeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhcCcEEEEEEEE---CCEeEEEEEecCCCCC
Q 048438 160 FPCHFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINASGKAYMTNVVL---GGIYAIRFATGATLTE 236 (239)
Q Consensus 160 ~~~~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~---~g~~~lR~~~~~~~t~ 236 (239)
++..+++.+.++. ......+.+.|.++|......... .+..++|+++...+|.
T Consensus 320 -~~~g~~~~~~~~~-----------------------~~~~~~l~~~l~~~gi~v~~~~~~~~~~~~~~iRis~~~~~~~ 375 (398)
T 3a2b_A 320 -ATESPILPIFIRS-----------------------NEKTFWVTKMLQDDGVFVNPVVSPAVPAEESLIRFSLMATHTY 375 (398)
T ss_dssp -SCCSSEEEEECCC-----------------------HHHHHHHHHHHHHTTEECEEECTTTSCGGGCEEEEECCTTCCH
T ss_pred -CCCCCEEEEEcCC-----------------------HHHHHHHHHHHHHCCcEEEeeCCCCCCCCCceEEEEEeCCCCH
Confidence 4456788777743 112336777787776554433221 1357899998876665
Q ss_pred c
Q 048438 237 E 237 (239)
Q Consensus 237 ~ 237 (239)
+
T Consensus 376 e 376 (398)
T 3a2b_A 376 D 376 (398)
T ss_dssp H
T ss_pred H
Confidence 4
No 71
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=99.51 E-value=6.9e-14 Score=129.18 Aligned_cols=149 Identities=14% Similarity=0.124 Sum_probs=97.3
Q ss_pred EEEEEecCCCCcccccChhHHHHHHHHhCCEEEEecccccccccCcccc---cc-cCCCCCcc----eEEEcCcccCCCc
Q 048438 6 LFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFR---HF-IDGVEGAD----SFSLNAHKWFFAT 77 (239)
Q Consensus 6 ~~vv~t~gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~---~~-~~~~~~~D----s~~~~~hK~l~~P 77 (239)
-+|+++.. |.+|.+.|+++|+++|+++|+++|||+||+++....+..+ .. ...+ ++| +++.|+||++++|
T Consensus 283 klviv~~p-n~~G~v~dl~~I~~la~~~g~~livDeAh~~~~~f~~~~~g~~~l~~~~~-g~D~~~~iv~~S~hK~L~g~ 360 (730)
T 1c4k_A 283 RLAVIQLG-TYDGTIYNAHEVVKRIGHLCDYIEFDSAWVGYEQFIPMMRNSSPLLIDDL-GPEDPGIIVVQSVHKQQAGF 360 (730)
T ss_dssp SEEEEESB-CTTSEEECHHHHHHHHGGGBSEEEEECTTCCGGGSSGGGGGGCTTSCCCC-CTTSCEEEEEECHHHHSSCC
T ss_pred eEEEEECC-CCCCeecCHHHHHHHHHHcCCeEEEEcccccccccCcccCCcCccccccc-CCCCCCEEEEECCCCCCCCC
Confidence 46666665 5799999999999999999999999999986533222221 01 1111 377 9999999999999
Q ss_pred ccceEEEeeCcccccccccCCCCccCCCC-----ceecCCCCC--ChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHH
Q 048438 78 LDCCCLWATNPEYLKNKATESKPVVDYKD-----WQITLSRSF--RSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLV 150 (239)
Q Consensus 78 ~g~g~l~~~~~~~l~~~~~~~~~~~~~~~-----~~~~~~~~~--~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l 150 (239)
.++|+++++++. +.... ...+... ...+.+.+. ...++-.+++.+..++.++++++..++++++++.|
T Consensus 361 ~~gg~I~v~~~~-l~g~~----~~i~~~~~~~~~~~~~stsp~~~~iaal~aA~~~l~~~~g~~~~~~~~~~a~~lr~~L 435 (730)
T 1c4k_A 361 SQTSQIHKKDSH-IKGQL----RYCDHKHFNNSFNLFMSTSPFYPMYAALDVNAAMQEGEAGRKLWHDLLITTIEARKKL 435 (730)
T ss_dssp TTCEEEEEECGG-GTTST----TCCCHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEecchh-hcCcc----cccCHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHH
Confidence 999999887643 21100 0111000 011111221 11233345555555444677888999999999999
Q ss_pred hC-CCCeEEEcC
Q 048438 151 SG-DKRFEVVFP 161 (239)
Q Consensus 151 ~~-~~g~~~~~~ 161 (239)
++ ++|++++.+
T Consensus 436 ~~~i~g~~v~~p 447 (730)
T 1c4k_A 436 IKAGSMFRPFVP 447 (730)
T ss_dssp HHTTCSSEESSC
T ss_pred hhhCCCeEEccc
Confidence 98 789998754
No 72
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=99.50 E-value=1.2e-13 Score=118.21 Aligned_cols=198 Identities=11% Similarity=0.061 Sum_probs=121.5
Q ss_pred ccEEEEEecCCCCcccc---cChhHHHHHHHHhCCEEEEecccccccccCcccccccCCC--CCcc--eEEEcCcccCC-
Q 048438 4 IPLFLCATIGTTAITAV---DPLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGV--EGAD--SFSLNAHKWFF- 75 (239)
Q Consensus 4 ~p~~vv~t~gtt~~G~i---~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~--~~~D--s~~~~~hK~l~- 75 (239)
.+-+|+++..+|.+|.+ +++++|+++|++||+++++|++|+.+......... +..+ ...| +++.++||+++
T Consensus 160 ~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~-~~~~~~~~~d~~i~~~s~sK~~g~ 238 (391)
T 3dzz_A 160 SVRMMVFCNPHNPIGYAWSEEEVKRIAELCAKHQVLLISDEIHGDLVLTDEDITP-AFTVDWDAKNWVVSLISPSKTFNL 238 (391)
T ss_dssp TEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCC-GGGSCTTTGGGEEEEECSHHHHTC
T ss_pred CceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCCEEEEecccccccCCCCCcee-hhhcCccccCcEEEEEeChhhccc
Confidence 46677788889999999 88999999999999999999999865432211111 1111 1256 88999999985
Q ss_pred CcccceEEEeeCcccccccccCCCCccCCCCceecCCCCCChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhC-CC
Q 048438 76 ATLDCCCLWATNPEYLKNKATESKPVVDYKDWQITLSRSFRSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSG-DK 154 (239)
Q Consensus 76 ~P~g~g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~-~~ 154 (239)
....+|+++..+++......... ...............+..+++. +.+.++++.++..++++++.+.|++ ++
T Consensus 239 ~G~r~G~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 311 (391)
T 3dzz_A 239 AALHAACAIIPNPDLRARAEESF------FLAGIGEPNLLAIPAAIAAYEE-GHDWLRELKQVLRDNFAYAREFLAKEVP 311 (391)
T ss_dssp TTTCCEEEECCSHHHHHHHHHHH------HHHTCSSCCTTHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred cchhheEEEECCHHHHHHHHHHH------HhhccCCCCHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 33457888776454433221100 0000001111222333344443 4555778888888999999999998 88
Q ss_pred CeEEEcCCCeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHH-hcCcEEEEEEEE--CCEeEEEEEec
Q 048438 155 RFEVVFPCHFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESIN-ASGKAYMTNVVL--GGIYAIRFATG 231 (239)
Q Consensus 155 g~~~~~~~~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~--~g~~~lR~~~~ 231 (239)
+++++.+.....+.+.++..+. + ...+.+.|. +.|....+.... .+..++|++++
T Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~---------------~-------~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~ 369 (391)
T 3dzz_A 312 EVKVLDSNASYLAWVDISALGM---------------N-------AEDFCKYLREKTGLIISAGNGYRGNGHEFVRINLA 369 (391)
T ss_dssp TSEECCCCBSSEEEEECGGGCS---------------C-------HHHHHHHHHHHHCEECEESGGGCTTGGGEEEEECC
T ss_pred CcEEeccCceEEEEEehhhcCC---------------C-------HHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEec
Confidence 9988754433344566653211 0 125666674 556554433222 23578999987
No 73
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=99.50 E-value=4.7e-13 Score=115.67 Aligned_cols=195 Identities=13% Similarity=0.087 Sum_probs=120.9
Q ss_pred cEEEEEecCCCCcccccChhHHHHHHHHhCCEEEEecccccccccCcccccc--cCCC-CCcceEEEcCcccCCCcccce
Q 048438 5 PLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHF--IDGV-EGADSFSLNAHKWFFATLDCC 81 (239)
Q Consensus 5 p~~vv~t~gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~--~~~~-~~~Ds~~~~~hK~l~~P~g~g 81 (239)
+.+|+++...+.+|.+.|+++|.++|++||+++++|.+|+.+.+... .... ..++ ..+|+++.+++|+++++ .|
T Consensus 187 ~~~vi~~~~~nptG~~~~l~~l~~la~~~~~~li~De~~~~g~~g~~-g~~~~~~~~~~~~~di~~~s~sK~~~~~--gg 263 (409)
T 3kki_A 187 PGIIVVDSIYSTLGTIAPLAELVNISKEFGCALLVDESHSLGTHGPN-GAGLLAELGLTREVHFMTASLAKTFAYR--AG 263 (409)
T ss_dssp SCEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSSGG-GCCHHHHHTCGGGCSEEEEESSSTTCSS--CE
T ss_pred CeEEEECCCCCCCCCcCCHHHHHHHHHHcCCEEEEECCccccccCCC-CCcchhhcCCCCCCCEEEeecchhhCCC--ce
Confidence 46788888889999999999999999999999999999987654211 1100 1111 24899999999998766 36
Q ss_pred EEEeeCcccccccccCCCCccCCCCceecCCCC-CChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEc
Q 048438 82 CLWATNPEYLKNKATESKPVVDYKDWQITLSRS-FRSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSGDKRFEVVF 160 (239)
Q Consensus 82 ~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~~~~ 160 (239)
+++. +++......... ..+....+.. .....+..+++.+. ..++..++..++.+++.+.|++. ++++.
T Consensus 264 ~v~~-~~~~~~~~~~~~------~~~~~~~~~~~~~~aa~~aal~~~~--~~~~~~~~~~~~~~~l~~~L~~~-g~~~~- 332 (409)
T 3kki_A 264 AIWC-NNEVNRCVPFIS------YPAIFSSTLLPYEAAGLETTLEIIE--SADNRRQHLDRMARKLRIGLSQL-GLTIR- 332 (409)
T ss_dssp EEEE-SSSGGGTHHHHC------HHHHHSBCCCHHHHHHHHHHHHHHH--HCHHHHHHHHHHHHHHHHHHHTT-TCCCC-
T ss_pred EEEE-CHHHHHHHHHhC------cCccccCCCcHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHc-CCccC-
Confidence 6555 333333221100 0011111111 11122333444332 22456667778999999999987 77655
Q ss_pred CCCeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhcCcEEEEEE---EECCEeEEEEEecCCCCCc
Q 048438 161 PCHFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINASGKAYMTNV---VLGGIYAIRFATGATLTEE 237 (239)
Q Consensus 161 ~~~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~---~~~g~~~lR~~~~~~~t~~ 237 (239)
...+++.+.++.. .....+.+.|.++|.+..... ...+..++|+++...+|++
T Consensus 333 -~~~~~~~~~~~~~-----------------------~~~~~~~~~L~~~Gv~v~~~~~~~~~~~~~~iRi~~~~~~t~e 388 (409)
T 3kki_A 333 -SESQIIGLETGDE-----------------------RNTEKVRDYLESNGVFGSVFCRPATSKNKNIIRLSLNSDVNDE 388 (409)
T ss_dssp -CSSSEEEEEEESH-----------------------HHHHHHHHHHHHTTEECEEECTTSSCTTCEEEEEECCTTCCHH
T ss_pred -CCCCEEEEEeCCH-----------------------HHHHHHHHHHHHCCceEeeeCCCCcCCCCcEEEEEccCCCCHH
Confidence 4567888887642 122356777877765533221 1345789999988766654
No 74
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.50 E-value=2.7e-13 Score=116.44 Aligned_cols=150 Identities=16% Similarity=0.275 Sum_probs=99.7
Q ss_pred cEEEEEecCCCCcccccChhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCcccc--eE
Q 048438 5 PLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATLDC--CC 82 (239)
Q Consensus 5 p~~vv~t~gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~--g~ 82 (239)
+.+|+++..++.+|.+.|+++|.++|++||+++++|++|+.+....+ .. . ++|+++.++||++++|.+. |+
T Consensus 138 ~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~-----~~-~-~~di~~~s~sK~~~~~~~~~~G~ 210 (386)
T 1cs1_A 138 PKLVLVESPSNPLLRVVDIAKICHLAREVGAVSVVDNTFLSPALQNP-----LA-L-GADLVLHSCTKYLNGHSDVVAGV 210 (386)
T ss_dssp CSEEEEECSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTTCCG-----GG-G-TCSEEEEETTTTTTCSSCCCCEE
T ss_pred CcEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcccccCCc-----cc-c-CceEEEEcCcccccCCCCceeEE
Confidence 45777888999999999999999999999999999999988765432 11 2 3899999999999989874 88
Q ss_pred EEeeCcccccccccCCCCccCCCCceecCCCCCChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEE-cC
Q 048438 83 LWATNPEYLKNKATESKPVVDYKDWQITLSRSFRSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSGDKRFEVV-FP 161 (239)
Q Consensus 83 l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~~~-~~ 161 (239)
+++++++....... +....+.....+..+.+++.+ +.+.++.++..+.++++.+.|++.+.+.-+ .+
T Consensus 211 ~~~~~~~l~~~l~~----------~~~~~~~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~l~~~l~~~~~l~~~~~~ 278 (386)
T 1cs1_A 211 VIAKDPDVVTELAW----------WANNIGVTGGAFDSYLLLRGL--RTLVPRMELAQRNAQAIVKYLQTQPLVKKLYHP 278 (386)
T ss_dssp EEESSHHHHHHHHH----------HHHHHTCBCCHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHTTCTTEEEEECT
T ss_pred EEeCcHHHHHHHHH----------HHHhcCCCCCHHHHHHHHhcc--cHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECC
Confidence 88765333322210 000001111223333333322 234455666677888888888887666433 22
Q ss_pred ----------------CCeeEEEEEEcC
Q 048438 162 ----------------CHFAVVCFRVSP 173 (239)
Q Consensus 162 ----------------~~~~iv~f~~~~ 173 (239)
...++++|.+++
T Consensus 279 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (386)
T 1cs1_A 279 SLPENQGHEIAARQQKGFGAMLSFELDG 306 (386)
T ss_dssp TSTTSTTHHHHHHHCSSCCSEEEEEESS
T ss_pred CCCCCccHHHHHHhcCCCceEEEEEECC
Confidence 126789998864
No 75
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=99.49 E-value=5.7e-13 Score=114.98 Aligned_cols=151 Identities=15% Similarity=0.165 Sum_probs=105.4
Q ss_pred ccEEEEEecCCCCcccccChhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCccc--ce
Q 048438 4 IPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATLD--CC 81 (239)
Q Consensus 4 ~p~~vv~t~gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g--~g 81 (239)
.+.+|++...+|.+|.+.|+++|+++|++||+++|+|++|+.+...-+ . .+ ++|+++.|+||+++++.+ +|
T Consensus 151 ~~~~v~~~~~~nptG~~~~l~~i~~la~~~g~~li~D~~~~~~~~~~~-----~-~~-~~di~~~S~sK~lg~~g~~~~G 223 (392)
T 3qhx_A 151 TTRLIWVETPTNPLLSIADIAGIAQLGADSSAKVLVDNTFASPALQQP-----L-SL-GADVVLHSTTKYIGGHSDVVGG 223 (392)
T ss_dssp TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTCTTTCCG-----G-GG-TCSEEEEETTTTTTCSSCCCCE
T ss_pred CCeEEEEECCCCCCcEEecHHHHHHHHHHcCCEEEEECCCcccccCCh-----H-Hh-CCcEEEEcCccccCCCCCceEE
Confidence 356778888999999999999999999999999999999986533211 1 12 399999999999887643 67
Q ss_pred EEEeeCcccccccccCCCCccCCCCceecCCCCCChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEcC
Q 048438 82 CLWATNPEYLKNKATESKPVVDYKDWQITLSRSFRSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSGDKRFEVVFP 161 (239)
Q Consensus 82 ~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~~~~~ 161 (239)
+++.+++.+...... .....+.....+..|.+++.+ +.+..++++..++++++.+.|++.+++.-+..
T Consensus 224 ~v~~~~~~~~~~l~~----------~~~~~g~~~~~~~~~~~~~~l--~~l~~~~~~~~~~~~~l~~~L~~~~~v~~v~~ 291 (392)
T 3qhx_A 224 ALVTNDEELDQSFAF----------LQNGAGAVPGPFDAYLTMRGL--KTLVLRMQRHSENAAAVAEFLAEHPAISTVLY 291 (392)
T ss_dssp EEEESCHHHHHHHHH----------HHHHHCCCCCHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHHTCTTEEEEEC
T ss_pred EEEECcHHHHHHHHH----------HHHhcCCCCCHHHHHHHHhhh--hHHHHHHHHHHHHHHHHHHHHhcCCCcceEEC
Confidence 777654443322210 011122333445566655543 34567778888999999999999888764432
Q ss_pred CC-----------------eeEEEEEEcC
Q 048438 162 CH-----------------FAVVCFRVSP 173 (239)
Q Consensus 162 ~~-----------------~~iv~f~~~~ 173 (239)
|. .++++|.+++
T Consensus 292 p~l~~~~~~~~~~~~~~g~g~~~~~~l~~ 320 (392)
T 3qhx_A 292 PGLPSHPGHAVAARQMRGFGGMVSVRMRA 320 (392)
T ss_dssp TTSTTSTTHHHHHHHCSSCCSEEEEEETT
T ss_pred CCCCCCCCHHHHHHhCCCCceEEEEEeCC
Confidence 21 4689999976
No 76
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.49 E-value=4.6e-13 Score=116.59 Aligned_cols=161 Identities=16% Similarity=0.176 Sum_probs=105.6
Q ss_pred ccEEEEEecCCCCcccccChhHHHHHHHHhCCEEEEeccc-ccccccCcccccccCCCCCcceEEEcCcccCCCccc-ce
Q 048438 4 IPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAY-AGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATLD-CC 81 (239)
Q Consensus 4 ~p~~vv~t~gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A~-~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g-~g 81 (239)
.+.+|+++..+|.+|.+.|+++|+++|+++|+++++|++| +.+.. .. . . +. ++|++++++||++++|.+ .|
T Consensus 144 ~~~~v~~~~~~n~~G~~~~l~~i~~~a~~~g~~livD~~~~~~g~~-~~---~-~-~~-~~Di~~~s~~K~l~~~g~~~G 216 (421)
T 2ctz_A 144 KTRAWWVESIGNPALNIPDLEALAQAAREKGVALIVDNTFGMGGYL-LR---P-L-AW-GAALVTHSLTKWVGGHGAVIA 216 (421)
T ss_dssp TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECGGGGGGTS-CC---G-G-GG-TCSEEEEETTTTTTCSSCCCC
T ss_pred CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCccccccc-CC---c-c-cc-CCeEEEECCcccccCCCCcEE
Confidence 3567888999999999999999999999999999999999 76632 11 1 1 12 399999999999998764 67
Q ss_pred EEEeeC--ccc-------ccccccCCCCcc---CCCCc--e--------ecCCCCCChHHHHHHHHHhCHHHHHHHHHHH
Q 048438 82 CLWATN--PEY-------LKNKATESKPVV---DYKDW--Q--------ITLSRSFRSLKLWFVIRNYGMENLRHFLRSH 139 (239)
Q Consensus 82 ~l~~~~--~~~-------l~~~~~~~~~~~---~~~~~--~--------~~~~~~~~~~~~~~~l~~~g~~g~~~~~~~~ 139 (239)
.+++.+ +++ +.+......... +.... . ...+.....+..|..++ +.+.+..++++.
T Consensus 217 ~~~~~~~~~~~~~~~~~~l~~~~~g~~g~~~~~~~~~~~~~~~~r~~~~~~~g~~~~~~~a~~~~~--~l~~l~~r~~~~ 294 (421)
T 2ctz_A 217 GAIVDGGNFPWEGGRYPLLTEPQPGYHGLRLTEAFGELAFIVKARVDGLRDQGQALGPFEAWVVLL--GMETLSLRAERH 294 (421)
T ss_dssp EEEEECSCSCCTTTTCHHHHSCBGGGTTBCHHHHHGGGHHHHHHHHTHHHHHCCCCCHHHHHHHHH--HHTTHHHHHHHH
T ss_pred EEEEeccchhhcccchhhhccccchhhhhhhhhhcchhHHHHHHHHHHHHhcCCCCCHHHHHHHHc--CcchHHHHHHHH
Confidence 777752 222 111100000000 00000 0 00122334444454444 334456677788
Q ss_pred HHHHHHHHHHHhCCCCeEEEc-C-----------------CCeeEEEEEEcC
Q 048438 140 VNMARLFERLVSGDKRFEVVF-P-----------------CHFAVVCFRVSP 173 (239)
Q Consensus 140 ~~la~~l~~~l~~~~g~~~~~-~-----------------~~~~iv~f~~~~ 173 (239)
.++++++.+.|++.|+++.+. | ...+|++|.+++
T Consensus 295 ~~~a~~l~~~L~~~p~v~~v~~p~~~~~~~~~~~~~~~~~~~g~ivsf~l~~ 346 (421)
T 2ctz_A 295 VENTLHLAHWLLEQPQVAWVNYPGLPHHPHHDRAQKYFKGKPGAVLTFGLKG 346 (421)
T ss_dssp HHHHHHHHHHHHTCTTEEEEECTTSTTCTTHHHHHHHHTTCCCSEEEEEETT
T ss_pred HHhHHHHHHHHHhCCCeeEEECCCCCCCCCHHHHHHhccCCCceEEEEEeCC
Confidence 899999999999999998874 2 236799999975
No 77
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.49 E-value=4.4e-13 Score=115.96 Aligned_cols=154 Identities=12% Similarity=0.053 Sum_probs=98.1
Q ss_pred cEEEEEecCCCCccccc---ChhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCccc--
Q 048438 5 PLFLCATIGTTAITAVD---PLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATLD-- 79 (239)
Q Consensus 5 p~~vv~t~gtt~~G~i~---pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g-- 79 (239)
+.+|+++..+|.+|.+. ++++|+++|++||+++++|++|+.+.... .....+.++...|+++.++||+++. .|
T Consensus 175 ~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~~-~~~~~~~~~~~~~i~~~s~sK~~g~-~G~r 252 (409)
T 2gb3_A 175 TKGIVLSNPCNPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRG-EFASALSIESDKVVVIDSVSKKFSA-CGAR 252 (409)
T ss_dssp EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSS-CCCCGGGSCCTTEEEEEESTTTTTC-GGGC
T ss_pred CeEEEECCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEECcccccccCC-CCCCccccCCCCEEEEecchhccCC-ccce
Confidence 56677788889999985 48999999999999999999998765422 1111123333489999999999853 44
Q ss_pred ceEEEeeCcccccccccCCCCccCCCCceecCCCCCChHHHHHHHHHh--CHHHHHHHHHHHHHHHHHHHHHHhCCCCeE
Q 048438 80 CCCLWATNPEYLKNKATESKPVVDYKDWQITLSRSFRSLKLWFVIRNY--GMENLRHFLRSHVNMARLFERLVSGDKRFE 157 (239)
Q Consensus 80 ~g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~~~g~~ 157 (239)
+|++++++++.+...... . ..+. ....+..+.+...+ +.+.+++..++..++.+++.+.|++. |++
T Consensus 253 ~G~~~~~~~~l~~~l~~~----~--~~~~-----~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~ 320 (409)
T 2gb3_A 253 VGCLITRNEELISHAMKL----A--QGRL-----APPLLEQIGSVGLLNLDDSFFDFVRETYRERVETVLKKLEEH-GLK 320 (409)
T ss_dssp CEEEECSCHHHHHHHHHH----H--HHSC-----CCCHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHT-TCC
T ss_pred EEEEEECcHHHHHHHHHH----H--hccC-----CCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHc-Cce
Confidence 788887552333222100 0 0000 11122222222233 45667778888889999999999987 887
Q ss_pred E-EcCCCeeEEEEEEc
Q 048438 158 V-VFPCHFAVVCFRVS 172 (239)
Q Consensus 158 ~-~~~~~~~iv~f~~~ 172 (239)
+ ..+.....+.+.++
T Consensus 321 ~~~~~~~~~~~~~~~~ 336 (409)
T 2gb3_A 321 RFTKPSGAFYITAELP 336 (409)
T ss_dssp CBCCCSBSSEEEEECS
T ss_pred eeeCCCeeEEEEEEeC
Confidence 7 43333334444654
No 78
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.49 E-value=5e-14 Score=121.06 Aligned_cols=199 Identities=15% Similarity=0.140 Sum_probs=117.5
Q ss_pred CCCCcccccChhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCcccceEEEeeCccccc
Q 048438 13 GTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLWATNPEYLK 92 (239)
Q Consensus 13 gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~~l~ 92 (239)
.++.+|.+.|+++|.++|+++|+++++|+||+.+....+.. ...+..+++++++.||+++++. .|+++..++....
T Consensus 150 ~~n~tG~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~---~~~~~di~~~S~s~~K~l~~g~-gg~~~~~~~~~~~ 225 (391)
T 3dr4_A 150 PVHLYGQICDMDPILEVARRHNLLVIEDAAEAVGATYRGKK---SGSLGDCATFSFFGNAIITTGE-GGMITTNDDDLAA 225 (391)
T ss_dssp CBCGGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEE---TTSSSSEEEEECBTTSSSCCBS-CEEEEESCHHHHH
T ss_pred EECCCCChhhHHHHHHHHHHcCCEEEEECcccccceECCee---ecccCCEEEEECCCCCcCCcCC-eEEEEECCHHHHH
Confidence 35789999999999999999999999999998776543321 1112236667777899997643 5566555443321
Q ss_pred ccc--cCCCCccCCCCceecCCCCCChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEcC--C-----C
Q 048438 93 NKA--TESKPVVDYKDWQITLSRSFRSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSGDKRFEVVFP--C-----H 163 (239)
Q Consensus 93 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~~~~~--~-----~ 163 (239)
... ...+...+...+....+..+....+..++.....++++++.++..++++++.+.|+++ ++++..+ + .
T Consensus 226 ~~~~~~~~g~~~~~~~~~~~~g~~~~~~~l~aa~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~ 304 (391)
T 3dr4_A 226 KMRLLRGQGMDPNRRYWFPIVGFNYRMTNIQAAIGLAQLERVDEHLAARERVVGWYEQKLARL-GNRVTKPHVALTGRHV 304 (391)
T ss_dssp HHHHHHBTTCCTTSTTCCSSCCCBCBCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHGGG-TTSEECCCCCTTSCCC
T ss_pred HHHHHHhcCCCCCCcccccccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-CccccCcCCCCCCcce
Confidence 111 0000000000011112223333344444443344667788888889999999999998 8887655 2 1
Q ss_pred eeEEEEEEcCC-CcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhcCcEEEEEEEE--------------------CC
Q 048438 164 FAVVCFRVSPL-PVLMDKLKTKYENCLLSEEEQINEFNRELLESINASGKAYMTNVVL--------------------GG 222 (239)
Q Consensus 164 ~~iv~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~--------------------~g 222 (239)
..++.+.++.. +. + ...+.+.|.++|......... ..
T Consensus 305 ~~~~~i~~~~~~~~---------------~-------~~~l~~~L~~~GI~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 362 (391)
T 3dr4_A 305 FWMYTVRLGEGLST---------------T-------RDQVIKDLDALGIESRPVFHPMHIMPPYAHLATDDLKIAEACG 362 (391)
T ss_dssp CSSEEEEECSSCSS---------------C-------HHHHHHHHHHTTCCCEECCCCGGGSGGGGGGCCTTCHHHHHHH
T ss_pred eEEEEEEECCccch---------------h-------HHHHHHHHHHCCCceeecCCccccChhhhhcCcCCChHHHHHH
Confidence 22456666541 10 0 125677777777654432100 01
Q ss_pred EeEEEEEecCCCCCcC
Q 048438 223 IYAIRFATGATLTEER 238 (239)
Q Consensus 223 ~~~lR~~~~~~~t~~~ 238 (239)
...+|++++..+|.+|
T Consensus 363 ~~~lrl~~~~~~t~ed 378 (391)
T 3dr4_A 363 VDGLNLPTHAGLTEAD 378 (391)
T ss_dssp HHEEEECCCTTCCHHH
T ss_pred hCeEEccCCCCCCHHH
Confidence 3689999877777653
No 79
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=99.49 E-value=2.6e-13 Score=116.38 Aligned_cols=155 Identities=12% Similarity=0.073 Sum_probs=95.8
Q ss_pred CCCCcccccChhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCcccceEEEeeCccc--
Q 048438 13 GTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLWATNPEY-- 90 (239)
Q Consensus 13 gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~~-- 90 (239)
.++.+|.+.|+++|.++|++||+++|+|++|+.+...... . +..+..+++++++.||++.++. .|+++.+++..
T Consensus 132 ~~n~tG~~~~l~~i~~la~~~~~~li~D~a~~~g~~~~~~--~-~~~~~~i~~~S~s~~K~l~g~~-~G~~~~~~~~~~~ 207 (388)
T 1b9h_A 132 PVHMAGLMADMDALAKISADTGVPLLQDAAHAHGARWQGK--R-VGELDSIATFSFQNGKLMTAGE-GGAVVFPDGETEK 207 (388)
T ss_dssp CBCGGGCCCCHHHHHHHHHHHTCCBCEECTTCTTCEETTE--E-GGGSSSCEEEECCTTSSSCSSS-CEEEEECTTCHHH
T ss_pred EeCCccCcCCHHHHHHHHHHcCCEEEEecchhcCCccCCe--e-cccccceEEEEccCCCcccCCC-eEEEEECCHHHHH
Confidence 6788999999999999999999999999999876543111 0 1122238888888999997764 57776654323
Q ss_pred ccccc--cCCCCccCCCCce-ecCCC--CCChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEcC----
Q 048438 91 LKNKA--TESKPVVDYKDWQ-ITLSR--SFRSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSGDKRFEVVFP---- 161 (239)
Q Consensus 91 l~~~~--~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~~~~~---- 161 (239)
+.... ...+.......+. ...+. +...+..+..+.. .+.+++..++..++++++.+.|++++++++..+
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~~~--~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~ 285 (388)
T 1b9h_A 208 YETAFLRHSCGRPRDDRRYFHKIAGSNMRLNEFSASVLRAQ--LARLDEQIAVRDERWTLLSRLLGAIDGVVPQGGDVRA 285 (388)
T ss_dssp HHHHHHHTBTTCCTTCSSCCCCSCCCBCBCBHHHHHHHHHH--HTTHHHHHHHHHHHHHHHHHHHHTSTTCEECCCCTTC
T ss_pred HHHHHHHHhCCCCccCccceeecccccCCcCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhccCCCccccCCCcCC
Confidence 22221 0000000000010 01111 2233333333332 234566777778899999999999889988753
Q ss_pred --CCeeEEEEEEcC
Q 048438 162 --CHFAVVCFRVSP 173 (239)
Q Consensus 162 --~~~~iv~f~~~~ 173 (239)
...++++|++++
T Consensus 286 ~~~~~~~~~~~~~~ 299 (388)
T 1b9h_A 286 DRNSHYMAMFRIPG 299 (388)
T ss_dssp CBCCCSEEEEECTT
T ss_pred CccceEEEEEEeCC
Confidence 225688888865
No 80
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=99.48 E-value=1.2e-13 Score=120.09 Aligned_cols=158 Identities=12% Similarity=0.114 Sum_probs=103.2
Q ss_pred ccEEEEEecCCCCcccccChhHHHHHHHHhC----------CEEEEecccccccccCcccccccCCCCCcceEEEcCccc
Q 048438 4 IPLFLCATIGTTAITAVDPLKPLCDVAKQFG----------IWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKW 73 (239)
Q Consensus 4 ~p~~vv~t~gtt~~G~i~pl~~i~~i~~~~g----------i~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~ 73 (239)
.+.+|++++.+|.+|.+.|+++|.++|+++| +++|+|+||+.+..+.+ +..+ ++|++++++|||
T Consensus 175 ~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~~~~~~~~~livDea~~~~~~~~~-----~~~~-~~d~~~~s~~K~ 248 (432)
T 3a9z_A 175 TTCLVTIMLANNETGVIMPISEISRRIKALNQIRAASGLPRVLVHTDAAQALGKRRVD-----VEDL-GVDFLTIVGHKF 248 (432)
T ss_dssp TEEEEECCSBCTTTCBBCCHHHHHHHHHHHHHHHHHHTCCCCEEEEECTTTTTTSCCC-----HHHH-CCSEEEEEGGGT
T ss_pred CceEEEEECcccCcccccCHHHHHHHHHhcCcccccccCCceEEEEEchhhhCCcccC-----hhhc-CCCEEEEehhHh
Confidence 3678888999999999999999999999999 99999999988755433 2112 389999999998
Q ss_pred CCCcccceEEEeeCcccccccccCCCCccCCC-CceecCCC-CC-ChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHH
Q 048438 74 FFATLDCCCLWATNPEYLKNKATESKPVVDYK-DWQITLSR-SF-RSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLV 150 (239)
Q Consensus 74 l~~P~g~g~l~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~-~~-~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l 150 (239)
+ +|. +|++++++......... ...+.. ......+. .. ....+..+++.+ .+++++..++..++++++.+.|
T Consensus 249 ~-g~~-~G~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~a~~aal~~~-~~~~~~~~~~~~~~~~~l~~~L 322 (432)
T 3a9z_A 249 Y-GPR-IGALYVRGVGKLTPLYP---MLFGGGQERNFRPGTENTPMIAGLGKAADLV-SENCETYEAHMRDIRDYLEERL 322 (432)
T ss_dssp T-CCS-CEEEEETTBTTTBCCCC---SCCSSCGGGGTSCSCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred c-CCc-ceEEEEccccccCCcCc---eeecCCccccccCCCcCHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHH
Confidence 6 577 99999865321211111 000000 00111111 11 112233345443 3467888888999999999999
Q ss_pred hCCCCeEEE--cC----CC-eeEEEEEEcC
Q 048438 151 SGDKRFEVV--FP----CH-FAVVCFRVSP 173 (239)
Q Consensus 151 ~~~~g~~~~--~~----~~-~~iv~f~~~~ 173 (239)
++++|+++. .+ .. .++++|.+++
T Consensus 323 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (432)
T 3a9z_A 323 EAEFGKRIHLNSRFPGVERLPNTCNFSIQG 352 (432)
T ss_dssp HHHHGGGEEESSCCTTCCBCTTEEEEEECS
T ss_pred HhccCCcEEEeCCCCcccCCCCEEEEEeCC
Confidence 886565443 33 12 3488899875
No 81
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=99.47 E-value=9.3e-14 Score=116.67 Aligned_cols=80 Identities=18% Similarity=0.177 Sum_probs=65.8
Q ss_pred cEEEEEecCCCCcccccChhHHHHHHHH-hCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCccc--ce
Q 048438 5 PLFLCATIGTTAITAVDPLKPLCDVAKQ-FGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATLD--CC 81 (239)
Q Consensus 5 p~~vv~t~gtt~~G~i~pl~~i~~i~~~-~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g--~g 81 (239)
+-+|++++.+|.+|.+.|+++|.++|++ +|+++++|++|+.+....+ .. . ++|++++++||++++|.+ +|
T Consensus 84 ~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~~li~D~a~~~~~~~~~-----~~-~-~~d~~~~s~~K~~~~~~~r~~G 156 (331)
T 1pff_A 84 TRIVYFETPANPTLKVIDIEDAVKQARKQKDILVIVDNTFASPILTNP-----LD-L-GVDIVVHSATKYINGHTDVVAG 156 (331)
T ss_dssp EEEEEEESSCTTTCCCCCHHHHHHHHTTSSSCEEEEECTTTHHHHCCG-----GG-G-TCSEEEEETTTTTSSSSSCCCE
T ss_pred CeEEEEECCCCCcCcccCHHHHHHHHhhhcCCEEEEECCCcccccCCh-----hh-c-CCcEEEEECccccCCCCCceEE
Confidence 5678889999999999999999999999 9999999999998765433 11 1 389999999999999987 78
Q ss_pred EEEeeCcccc
Q 048438 82 CLWATNPEYL 91 (239)
Q Consensus 82 ~l~~~~~~~l 91 (239)
+++.++++.+
T Consensus 157 ~~~~~~~~~~ 166 (331)
T 1pff_A 157 LVCSRADIIA 166 (331)
T ss_dssp EEEECHHHHH
T ss_pred EEEeCcHHHH
Confidence 8877542443
No 82
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.47 E-value=1.6e-13 Score=116.98 Aligned_cols=142 Identities=15% Similarity=0.114 Sum_probs=88.0
Q ss_pred CCCCcccccChhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCc--ccCCCcccceEEEeeCccc
Q 048438 13 GTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAH--KWFFATLDCCCLWATNPEY 90 (239)
Q Consensus 13 gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~h--K~l~~P~g~g~l~~~~~~~ 90 (239)
.++.+|.+.|+++|.++|++||+++++|++|+.+..... + ..+ ..+|++++++| |+++++...|+++.+++..
T Consensus 131 ~~n~~G~~~~~~~i~~~~~~~~~~li~D~~~~~g~~~~~--~--~~~-~~~d~~~~s~~~~K~l~~~g~~g~~~~~~~~~ 205 (374)
T 3uwc_A 131 PVHYTGNIADMPALAKIAKKHNLHIVEDACQTILGRIND--K--FVG-SWGQFACFSLHPLKNLNVWSDAGVIITHSDEY 205 (374)
T ss_dssp CBCGGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETT--E--ETT-SSSSEEEEECSSSSSSCCSSCCEEEEESCHHH
T ss_pred EeCCcCCcCCHHHHHHHHHHcCCEEEEeCCCccCceeCC--e--ecc-ccccEEEEeCCCCCcCCccceeEEEEeCCHHH
Confidence 667899999999999999999999999999987654211 1 111 12799999988 9987644466666655433
Q ss_pred ccccccC-CCCccCCCCcee-cCCCCCChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCCCC-eEEEcC
Q 048438 91 LKNKATE-SKPVVDYKDWQI-TLSRSFRSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSGDKR-FEVVFP 161 (239)
Q Consensus 91 l~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g-~~~~~~ 161 (239)
....... ..+.. ..+.. ..+..+....+..++.....++++++.++..++++++.+.|+++++ +++...
T Consensus 206 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~aa~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 277 (374)
T 3uwc_A 206 AEKLRLYRNHGLI--NRDVCVEYGINCRMDTIQAVIANRLMNQLETITEKRRGIAHLYDQSFVDLSEFIDVPVR 277 (374)
T ss_dssp HHHHHHHTBTTEE--ETTEESSCCCBCBCCHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHTGGGTTTEECCCC
T ss_pred HHHHHHHHhcCcc--ccCccccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEeccC
Confidence 2211100 00000 00111 1112222233333333333456677888888999999999999877 887543
No 83
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=99.46 E-value=2.4e-12 Score=109.48 Aligned_cols=189 Identities=11% Similarity=0.000 Sum_probs=118.8
Q ss_pred cEEEEEecCCCCcccccC---hhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCc-ccc
Q 048438 5 PLFLCATIGTTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFAT-LDC 80 (239)
Q Consensus 5 p~~vv~t~gtt~~G~i~p---l~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P-~g~ 80 (239)
+-+|+++..+|.+|.+.| +++|+++|++||+++++|.+|+.+............. ...|+++.++||+++.| ..+
T Consensus 147 ~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~ 225 (364)
T 1lc5_A 147 LDCLFLCTPNNPTGLLPERPLLQAIADRCKSLNINLILDEAFIDFIPHETGFIPALKD-NPHIWVLRSLTKFYAIPGLRL 225 (364)
T ss_dssp CCEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGSTTCCCSGGGCTT-CTTEEEEEESTTTTTCTTTCC
T ss_pred CCEEEEeCCCCCCCCCCCHHHHHHHHHHhhhcCcEEEEECcChhhccCccchhhHhcc-CCCEEEEEECchhhcCCccce
Confidence 445666777899999998 9999999999999999999998654311000111111 23788999999998644 236
Q ss_pred eEEEeeCcccccccccCCCCccCCCCceecCCCCCChHHHHHHHHHhC-HHHHHHHHHHHHHHHHHHHHHHhCCCCeEEE
Q 048438 81 CCLWATNPEYLKNKATESKPVVDYKDWQITLSRSFRSLKLWFVIRNYG-MENLRHFLRSHVNMARLFERLVSGDKRFEVV 159 (239)
Q Consensus 81 g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g-~~g~~~~~~~~~~la~~l~~~l~~~~g~~~~ 159 (239)
|++++.+++.+....... ..+ ....+..+.+...+. .+.+++..++..++.+++.+.|++.+++++.
T Consensus 226 G~~~~~~~~~~~~l~~~~------~~~------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 293 (364)
T 1lc5_A 226 GYLVNSDDAAMARMRRQQ------MPW------SVNALAALAGEVALQDSAWQQATWHWLREEGARFYQALCQLPLLTVY 293 (364)
T ss_dssp EEEECCCHHHHHHHHHHS------CTT------CSCHHHHHHHHHGGGCHHHHHHHHHHHHHHHHHHHHHHHTSTTEEEC
T ss_pred EEEEECCHHHHHHHHHhC------CCC------CCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcCCCCEEC
Confidence 888733444433221100 001 112333344433332 2456677777888899999999988899875
Q ss_pred cCCCeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhcCcEEEEEEEE--CCEeEEEEEecC
Q 048438 160 FPCHFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINASGKAYMTNVVL--GGIYAIRFATGA 232 (239)
Q Consensus 160 ~~~~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~--~g~~~lR~~~~~ 232 (239)
++..+.+.+.++... ..+.+.|.++|..+...... .+..++|+++..
T Consensus 294 -~~~g~~~~~~~~~~~-------------------------~~l~~~l~~~gi~v~~g~~~~~~~~~~iRis~~~ 342 (364)
T 1lc5_A 294 -PGRANYLLLRCERED-------------------------IDLQRRLLTQRILIRSCANYPGLDSRYYRVAIRS 342 (364)
T ss_dssp -CCSSSEEEEEESCTT-------------------------CCHHHHHHTTTEECEECTTSTTCCTTEEEEECCC
T ss_pred -CCCCeEEEEECCCcH-------------------------HHHHHHHHHCCcEEeeCcccCCCCCCEEEEEeCC
Confidence 566677777775311 14566777776554432222 134689999753
No 84
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=99.46 E-value=1.5e-12 Score=114.12 Aligned_cols=148 Identities=14% Similarity=0.207 Sum_probs=102.7
Q ss_pred EEEEEecCCCCcccccChhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCcc--cceEE
Q 048438 6 LFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATL--DCCCL 83 (239)
Q Consensus 6 ~~vv~t~gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~--g~g~l 83 (239)
.+|++...+|.+|.+.|+++|+++||++|++++||++|+.+....+ . .+ ++|+++.++||+++++. ..|++
T Consensus 202 ~lV~le~p~NptG~v~dl~~I~~la~~~g~~livD~a~~~~~~~~~-----~-~~-g~Div~~S~sK~~gg~gd~~~G~l 274 (445)
T 1qgn_A 202 NLFFTESPTNPFLRCVDIELVSKLCHEKGALVCIDGTFATPLNQKA-----L-AL-GADLVLHSATKFLGGHNDVLAGCI 274 (445)
T ss_dssp EEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTTCCT-----T-TT-TCSEEEECTTTTTTCSSSCCCEEE
T ss_pred CEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcccccCCc-----c-cc-CCEEEEECCcccccccccceEEEE
Confidence 6788889999999999999999999999999999999987644222 1 22 49999999999987543 27887
Q ss_pred EeeCcccccccccCCCCccCCCCceecCCCCCChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCCCCe-EEEcCC
Q 048438 84 WATNPEYLKNKATESKPVVDYKDWQITLSRSFRSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSGDKRF-EVVFPC 162 (239)
Q Consensus 84 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~-~~~~~~ 162 (239)
+.+ ++++..... +....+.....+..|..++.+ +.+..++++..+.++++.+.|++.|++ ++..|.
T Consensus 275 ~~~-~~l~~~l~~----------~~~~~g~~~~~~~a~~~~~~l--~~l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~ 341 (445)
T 1qgn_A 275 SGP-LKLVSEIRN----------LHHILGGALNPNAAYLIIRGM--KTLHLRVQQQNSTALRMAEILEAHPKVRHVYYPG 341 (445)
T ss_dssp EEC-HHHHHHHHH----------HHHHHCCCCCHHHHHHHHHHG--GGHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTT
T ss_pred EEC-HHHHHHHHH----------HHHHhCCCCCHHHHHHHHHhH--HHHHHHHHHHHHHHHHHHHHHhcCCCceEEECCC
Confidence 774 333332210 000111122334445444433 445667777778899999999999888 455441
Q ss_pred ----------------CeeEEEEEEcC
Q 048438 163 ----------------HFAVVCFRVSP 173 (239)
Q Consensus 163 ----------------~~~iv~f~~~~ 173 (239)
..++++|.+++
T Consensus 342 l~~~p~~~~~~~~~~g~g~ivsf~l~~ 368 (445)
T 1qgn_A 342 LQSHPEHHIAKKQMTGFGGAVSFEVDG 368 (445)
T ss_dssp SSSSTTHHHHHHHCSCCCSEEEEEESS
T ss_pred CCCCchHHHHHHhccCCCcEEEEEECC
Confidence 46899999975
No 85
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.46 E-value=2.3e-13 Score=116.16 Aligned_cols=139 Identities=12% Similarity=0.063 Sum_probs=84.2
Q ss_pred CCCCcccccChhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEc--CcccCCCcccceEEEeeCccc
Q 048438 13 GTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLN--AHKWFFATLDCCCLWATNPEY 90 (239)
Q Consensus 13 gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~--~hK~l~~P~g~g~l~~~~~~~ 90 (239)
.++.+|.+.|+++|.++|+++|+++|+|+||+.|.. .+. + ..+ ..+|+++++ .||+++++...|+++.+++..
T Consensus 130 ~~n~~G~~~~l~~i~~l~~~~~~~li~D~a~~~g~~-~~~-~--~~~-~~~d~~~~S~~~~K~l~~~g~gg~~~~~~~~~ 204 (373)
T 3frk_A 130 AVHLYGQPADMDEIKRIAKKYNLKLIEDAAQAHGSL-YKG-M--KVG-SLGDAAGFSFYPAKNLGSLGDGGAVVTNDKDL 204 (373)
T ss_dssp EECCTTCCCCHHHHHHHHHHHTCEEEEECTTCTTCE-ETT-E--ETT-SSSSEEEEECCTTSSSCCSSSCEEEEESCHHH
T ss_pred EECCCcCcccHHHHHHHHHHcCCEEEEECCcccCCE-ECC-E--ecc-ccccEEEEeCcCCCccCccceeEEEEeCCHHH
Confidence 456899999999999999999999999999997765 221 1 111 126787777 669987634456666554433
Q ss_pred ccccc--cCCCCccCCCCceecCCCCCChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEE
Q 048438 91 LKNKA--TESKPVVDYKDWQITLSRSFRSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSGDKRFEVV 159 (239)
Q Consensus 91 l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~~~ 159 (239)
..... ...+....+ .....+..+....+..++.....++++++.++..++++++.+.|++++ +++.
T Consensus 205 ~~~~~~~~~~g~~~~~--~~~~~g~~~~~~~~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~ 272 (373)
T 3frk_A 205 AEKIKALSNYGSEKKY--HHIYKGFNSRLDELQAGFLRVKLKYLDKWNEERRKIAQKYIAGINNPN-VIIP 272 (373)
T ss_dssp HHHHHHHHBTTCSBTT--BCCSCCCBCCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHCCCTT-EECC
T ss_pred HHHHHHHHhcCcccCC--ccccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-eEec
Confidence 21111 000000000 011112222223333333333345667788888899999999999875 6654
No 86
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=99.45 E-value=2.8e-13 Score=116.86 Aligned_cols=150 Identities=14% Similarity=0.242 Sum_probs=97.7
Q ss_pred ccEEEEEecCCCCcccccChhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCccc--ce
Q 048438 4 IPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATLD--CC 81 (239)
Q Consensus 4 ~p~~vv~t~gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g--~g 81 (239)
.+.+|+++..+|.+|.+.|+++|+++|++||+++|+|++|+.+....+ . .+ ++|+++.++||++++|.+ +|
T Consensus 149 ~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~-----~-~~-~~di~~~s~sK~~~~~g~~~~G 221 (398)
T 2rfv_A 149 ETKVVYIETPANPTLSLVDIETVAGIAHQQGALLVVDNTFMSPYCQQP-----L-QL-GADIVVHSVTKYINGHGDVIGG 221 (398)
T ss_dssp TEEEEEEESSBTTTTBCCCHHHHHHHHHHTTCEEEEECTTTCTTTCCG-----G-GG-TCSEEEEETTTTTTCSSCCCCE
T ss_pred CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcccccCCc-----h-hh-CCcEEEEeCcccccCCCCceEE
Confidence 356788889999999999999999999999999999999987755322 1 12 389999999999988877 68
Q ss_pred EEEeeCccccc-ccccCCCCccCCCCceecC-CCCCChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCCCCeE--
Q 048438 82 CLWATNPEYLK-NKATESKPVVDYKDWQITL-SRSFRSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSGDKRFE-- 157 (239)
Q Consensus 82 ~l~~~~~~~l~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~-- 157 (239)
+++.++ +.+. .... +.... +.....+..+.++..+. .+..++++..+.++++.+.|++.+.+.
T Consensus 222 ~~~~~~-~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~~l~~~l~~~~~v~~~ 288 (398)
T 2rfv_A 222 IIVGKQ-EFIDQARFV----------GLKDITGGCMSPFNAWLTLRGVK--TLGIRMERHCENALKIARFLEGHPSITRV 288 (398)
T ss_dssp EEEECH-HHHHHHHHT----------HHHHTTCCCCCHHHHHHHHHHHT--THHHHHHHHHHHHHHHHHHHHTCTTEEEE
T ss_pred EEEECH-HHHHHHHHH----------HHHhCCCCCCCHHHHHHHHhhhh--hHHHHHHHHHHHHHHHHHHHHcCCCeeEE
Confidence 887753 3332 1110 00001 11122344444444332 234455556667777777777654332
Q ss_pred ------------EEcC---CCeeEEEEEEcC
Q 048438 158 ------------VVFP---CHFAVVCFRVSP 173 (239)
Q Consensus 158 ------------~~~~---~~~~iv~f~~~~ 173 (239)
+..+ ...++++|.+++
T Consensus 289 ~~~~L~~~p~~~~~~~~~~~~g~~~~~~~~~ 319 (398)
T 2rfv_A 289 YYPGLSSHPQYELGQRQMSLPGGIISFEIAG 319 (398)
T ss_dssp ECTTSTTSTTHHHHHHHCSSCCSEEEEEETT
T ss_pred ECCCCCCCccHHHHHhhCCCCceEEEEEEcC
Confidence 2211 247899998864
No 87
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=99.45 E-value=1.7e-13 Score=118.41 Aligned_cols=155 Identities=12% Similarity=0.099 Sum_probs=98.0
Q ss_pred cEEEEEecCCCCcccccChhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCcccceEEE
Q 048438 5 PLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLW 84 (239)
Q Consensus 5 p~~vv~t~gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~ 84 (239)
|.+|+++..+ .|...|+++|.++|++||+++++|++|+.+......+.. .+..+|+++.++||++++|.| |+++
T Consensus 170 ~~~v~~~~~~--~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~---~~~~~di~~~s~sK~~~g~~g-g~~~ 243 (420)
T 3gbx_A 170 PKMIIGGFSA--YSGVVDWAKMREIADSIGAYLFVDMAHVAGLIAAGVYPN---PVPHAHVVTTTTHKTLAGPRG-GLIL 243 (420)
T ss_dssp CSEEEECCTT--CCSCCCHHHHHHHHHHTTCEEEEECTTTHHHHHTTSSCC---STTTSSEEEEESSGGGCSCSC-EEEE
T ss_pred CeEEEEecCc--cCCccCHHHHHHHHHHcCCEEEEECCcchhceecccCCc---ccccCCEEEeecccCCCCCCc-eEEE
Confidence 4455555433 467899999999999999999999999766553221111 122489999999999988886 7766
Q ss_pred eeC--cccccccccCCCCccCCCCceecCCCC-CChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEcC
Q 048438 85 ATN--PEYLKNKATESKPVVDYKDWQITLSRS-FRSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSGDKRFEVVFP 161 (239)
Q Consensus 85 ~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~~~~~ 161 (239)
..+ ..+....... . ..+. .++.. ....++..++..+..+.++++.++..++++++.+.|.+ .|++++.+
T Consensus 244 ~~~~~~~~~~~~~~~---~---~~~~-~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~~ 315 (420)
T 3gbx_A 244 AKGGDEELYKKLNSA---V---FPSA-QGGPLMHVIAGKAVALKEAMEPEFKVYQQQVAKNAKAMVEVFLN-RGYKVVSG 315 (420)
T ss_dssp ESSCCHHHHHHHHHH---H---C-----CCCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHH-TTCEEGGG
T ss_pred EcCCcHHHHHHhhhh---c---CCCC-CCCcchhHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHh-cCCeeccC
Confidence 644 1222211100 0 0000 00111 11223333444444466778888889999999999988 58988754
Q ss_pred -CCeeEEEEEEcC
Q 048438 162 -CHFAVVCFRVSP 173 (239)
Q Consensus 162 -~~~~iv~f~~~~ 173 (239)
...+++.+.+++
T Consensus 316 ~~~~~~~~~~~~~ 328 (420)
T 3gbx_A 316 GTENHLFLLDLVD 328 (420)
T ss_dssp SCSSSEEEEECGG
T ss_pred CCCCeEEEEEcCC
Confidence 456777777754
No 88
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=99.45 E-value=1.3e-12 Score=112.62 Aligned_cols=150 Identities=14% Similarity=0.167 Sum_probs=100.2
Q ss_pred cEEEEEecCCCCcccccChhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCccc--ceE
Q 048438 5 PLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATLD--CCC 82 (239)
Q Consensus 5 p~~vv~t~gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g--~g~ 82 (239)
+-+|++...+|.+|.+.|+++|+++|+++|+++++|++|+.+....+ +. + ++|+++.++||++++|.+ +|+
T Consensus 145 ~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~livD~~~~~~~~~~~-----~~-~-~~di~~~S~sK~~~~~~~~~~G~ 217 (389)
T 3acz_A 145 TKMVYLESPANPTCKVSDIKGIAVVCHERGARLVVDATFTSPCFLKP-----LE-L-GADIALHSVSKYINGHGDVIGGV 217 (389)
T ss_dssp EEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTCTTTCCG-----GG-T-TCSEEEEETTTTTTCSSCCCCEE
T ss_pred CeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCccccccCc-----cc-c-CCeEEEECChhhccCCCCceeEE
Confidence 56788888999999999999999999999999999999987653211 11 2 499999999999999987 688
Q ss_pred EEeeCcccccccccCCCCccCCCCceecCCCCCChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEc-C
Q 048438 83 LWATNPEYLKNKATESKPVVDYKDWQITLSRSFRSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSGDKRFEVVF-P 161 (239)
Q Consensus 83 l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~~~~-~ 161 (239)
++.++++.+...... ....+........|.+++.+ +.+..++++..+.++++.+.|++.+.++-+. +
T Consensus 218 v~~~~~~~~~~l~~~----------~~~~g~~~~~~~~~~~~~~l--~~l~~r~~~~~~~~~~l~~~l~~~~~v~~~~~~ 285 (389)
T 3acz_A 218 SSAKTAEDIATIKFY----------RKDAGSLMAPMDAFLCARGM--KTLPIRMQIHMENGLKVAKFLEQHEKIVKVNHP 285 (389)
T ss_dssp EEESSHHHHHHHHHH----------HHHHCCCCCHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHHHCTTEEEEECT
T ss_pred EEECcHHHHHHHHHH----------HHhcCCCCCHHHHHHHHcCc--cHHHHHHHHHHHHHHHHHHHHHcCCCeeEEECC
Confidence 887652443322110 00011112334455554443 3345566667777888888887765544221 1
Q ss_pred ----------------CCeeEEEEEEcC
Q 048438 162 ----------------CHFAVVCFRVSP 173 (239)
Q Consensus 162 ----------------~~~~iv~f~~~~ 173 (239)
...++++|.+++
T Consensus 286 ~L~~~~~~~~~~~~~~g~g~~~~~~l~~ 313 (389)
T 3acz_A 286 GLESFPGHDIAKKQMTGYGSTFLFEMKS 313 (389)
T ss_dssp TSTTSTTHHHHHHHCSSCCSEEEEEESS
T ss_pred CCCCCccHHHHHhhCCCCCeEEEEEECC
Confidence 125789998864
No 89
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=99.43 E-value=4.3e-12 Score=110.36 Aligned_cols=206 Identities=15% Similarity=0.091 Sum_probs=118.1
Q ss_pred cEEEEEecCCCCcccccC---hhHHHHHHHHhCCEEEEecccccccccCcccc-------cccCCCCCcceEEEcCcccC
Q 048438 5 PLFLCATIGTTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSACIFPEFR-------HFIDGVEGADSFSLNAHKWF 74 (239)
Q Consensus 5 p~~vv~t~gtt~~G~i~p---l~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~-------~~~~~~~~~Ds~~~~~hK~l 74 (239)
+-+|+++..+|.+|.+.| +++|+++|++||+++++|++|+.....-...- ..+.+....++++.++||++
T Consensus 183 ~~~v~l~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~ 262 (437)
T 3g0t_A 183 FCSIIYSNPNNPTWQCMTDEELRIIGELATKHDVIVIEDLAYFGMDFRKDYSHPGEPLYQPSVANYTDNYILALSSSKAF 262 (437)
T ss_dssp CCEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCCTTSCCCSTTSSCCCCCGGGTCSCEEEEEESTTTT
T ss_pred ceEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchhhcccCCCcCcccccchhhccCCCCCcEEEEEcCccCC
Confidence 456667778999999987 77789999999999999999986433210000 01112124778999999998
Q ss_pred C-CcccceEEEeeCccccc-ccc---cC-CCCccC---CCCceecCCCCCChHHHHHHHHHhCHHH-----HHHHHHHHH
Q 048438 75 F-ATLDCCCLWATNPEYLK-NKA---TE-SKPVVD---YKDWQITLSRSFRSLKLWFVIRNYGMEN-----LRHFLRSHV 140 (239)
Q Consensus 75 ~-~P~g~g~l~~~~~~~l~-~~~---~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~g~~g-----~~~~~~~~~ 140 (239)
+ ....+|+++.. ++.+. ... .. ...... .........-....+....+...+.... ++++.++..
T Consensus 263 ~~~G~r~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~ 341 (437)
T 3g0t_A 263 SYAGQRIGVLMIS-GKLYEREYPDLEESFGRLRFGEALSSSALYALSSGATHSAQWGMAAMLKACNDGEYNFRDSVIEYG 341 (437)
T ss_dssp SCGGGCCEEEEEC-HHHHHCBCGGGHHHHSCSBHHHHHHTTHHHHHHSSSCHHHHHHHHHHHHHHHTTSCCHHHHHHHHH
T ss_pred CCccceeEEEEEC-HHHhhhhhhcccccccccchhHHHHHHHHhhhcCCCCHHHHHHHHHHHhCcHhHHHHHHHHHHHHH
Confidence 6 33447888774 33333 200 00 000000 0000000000111233333322222222 677788888
Q ss_pred HHHHHHHHHHhCCCCeEEE------cC-CCeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhcCcE
Q 048438 141 NMARLFERLVSGDKRFEVV------FP-CHFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINASGKA 213 (239)
Q Consensus 141 ~la~~l~~~l~~~~g~~~~------~~-~~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~ 213 (239)
++.+++.+.|++. |++++ .+ ...+.+.+.+++.. ...+.+.|.++|..
T Consensus 342 ~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~l~~~L~~~gi~ 396 (437)
T 3g0t_A 342 RKARIMKKMFLDN-GFNIVYDKDGNEPLADGFYFTVGYKGMD------------------------SSKLIEKFVRYGMC 396 (437)
T ss_dssp HHHHHHHHHHHTT-TEEESSCEETTEECCSSSEEEEEETTCC------------------------HHHHHHHHHHTTEE
T ss_pred HHHHHHHHHHHHc-CCEEeccccCCCCCceeEEEEEecCCCC------------------------HHHHHHHHHHcCeE
Confidence 9999999999998 99987 35 55667777876321 12566777777665
Q ss_pred EEEEEEEC-C-EeEEEEEecCCCCCc
Q 048438 214 YMTNVVLG-G-IYAIRFATGATLTEE 237 (239)
Q Consensus 214 ~~~~~~~~-g-~~~lR~~~~~~~t~~ 237 (239)
..+..... . ..++|++++.. |.+
T Consensus 397 v~~~~~~~~~~~~~iRis~~~~-~~e 421 (437)
T 3g0t_A 397 AITLKTTGSKRNEAMRICTSLL-PES 421 (437)
T ss_dssp CEESTTTTCCCTTCEEEECSSS-CGG
T ss_pred EeeccccCCCCCCEEEEEEecC-CHH
Confidence 44322111 1 16799998743 443
No 90
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=99.43 E-value=8e-13 Score=113.21 Aligned_cols=191 Identities=13% Similarity=0.112 Sum_probs=113.0
Q ss_pred cEEEEEecCCCCcccccC---hhHHHHHHHHhCCEEEEecccccccccCcccccccCCC----CCcceEEEcCcccCCCc
Q 048438 5 PLFLCATIGTTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGV----EGADSFSLNAHKWFFAT 77 (239)
Q Consensus 5 p~~vv~t~gtt~~G~i~p---l~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~----~~~Ds~~~~~hK~l~~P 77 (239)
+-+|+++..+|.+|.+.| +++|+++|++||+++++|++|+.+......... +..+ ...|+++.++||+++ +
T Consensus 164 ~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~s~sK~~~-~ 241 (388)
T 1j32_A 164 TKLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLS-IGAASPEAYERSVVCSGFAKTYA-M 241 (388)
T ss_dssp EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCC-GGGSCHHHHHTEEEEEESTTTTT-C
T ss_pred ceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCC-HHHccccccCCEEEEeechhccC-C
Confidence 556777888899999854 999999999999999999999875432111100 1111 137899999999974 4
Q ss_pred cc--ceEEEeeCcccccccccCCCCccCCCCceecCCCCCChHHHHHHHHHh--CHHHHHHHHHHHHHHHHHHHHHHhCC
Q 048438 78 LD--CCCLWATNPEYLKNKATESKPVVDYKDWQITLSRSFRSLKLWFVIRNY--GMENLRHFLRSHVNMARLFERLVSGD 153 (239)
Q Consensus 78 ~g--~g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~~ 153 (239)
.| +|+++.+ ++.+...... .....-....+..+.++..+ +.+.+++..++..++.+++.+.|+++
T Consensus 242 ~G~r~G~~~~~-~~~~~~l~~~----------~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 310 (388)
T 1j32_A 242 TGWRVGFLAGP-VPLVKAATKI----------QGHSTSNVCTFAQYGAIAAYENSQDCVQEMLAAFAERRRYMLDALNAM 310 (388)
T ss_dssp TTTCCEEEECC-HHHHHHHHHH----------HHTTTCSCCHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred cccceEEEEeC-HHHHHHHHHH----------HhhcccCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 46 8888864 3332221100 00000011123333222222 34556777888889999999999998
Q ss_pred CCeEEEcCCCeeE-EEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHh-cCcEEEEEEEECCEeEEEEEec
Q 048438 154 KRFEVVFPCHFAV-VCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINA-SGKAYMTNVVLGGIYAIRFATG 231 (239)
Q Consensus 154 ~g~~~~~~~~~~i-v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~g~~~lR~~~~ 231 (239)
+|++++.+ ..+. +.+.++..+. + ...+.+.|.+ .|..+..........++|+++.
T Consensus 311 ~g~~~~~~-~~~~~~~~~~~~~~~---------------~-------~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~ 367 (388)
T 1j32_A 311 PGLECPKP-DGAFYMFPSIAKTGR---------------S-------SLDFCSELLDQHQVATVPGAAFGADDCIRLSYA 367 (388)
T ss_dssp TTCBCCCC-CBTTEECCBCGGGTC---------------C-------HHHHHHHHHHHHCEECEEGGGGTCTTBEEEECC
T ss_pred CCCcccCC-CeeEEEEEecCCCCC---------------C-------HHHHHHHHHHhCCEEEeChhhhCCCCcEEEEec
Confidence 88887644 3333 3333331000 0 1256666765 4655443222222467999986
No 91
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=99.42 E-value=3.8e-12 Score=108.44 Aligned_cols=186 Identities=11% Similarity=0.021 Sum_probs=111.3
Q ss_pred ccEEEEEecCCCCcccccC----hhHHHHHHHHhCCEEEEeccccc-ccccCcccccccCCCCCcceEEEcCcccCCCcc
Q 048438 4 IPLFLCATIGTTAITAVDP----LKPLCDVAKQFGIWVHVDAAYAG-SACIFPEFRHFIDGVEGADSFSLNAHKWFFATL 78 (239)
Q Consensus 4 ~p~~vv~t~gtt~~G~i~p----l~~i~~i~~~~gi~lhvD~A~~~-~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~ 78 (239)
.+.+|+++..++.+|.+.| +++|.++|++||+++++|++|+. +... ........+. .+|++++| |+++++.
T Consensus 172 ~~~~v~~~~~~~~tG~~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~-~~~~~~~~~~-~~d~~s~S--K~~~~g~ 247 (375)
T 2eh6_A 172 ETAGIIIEVIQGEGGVNEASEDFLSKLQEICKEKDVLLIIDEVQTGIGRTG-EFYAYQHFNL-KPDVIALA--KGLGGGV 247 (375)
T ss_dssp TEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTS-SSSGGGGGTC-CCSEEEEC--GGGGTTS
T ss_pred CeEEEEEeCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCC-cchhhhhcCC-CCCEEEEc--ccccCCC
Confidence 3567777888899999988 99999999999999999999983 2211 0010001122 38888777 9888888
Q ss_pred cceEEEeeCcccccccccCCCCccCCCCceecCCCCCChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCCCCeEE
Q 048438 79 DCCCLWATNPEYLKNKATESKPVVDYKDWQITLSRSFRSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSGDKRFEV 158 (239)
Q Consensus 79 g~g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~~ 158 (239)
++|++++++ +.+....... .....+. ..+....++..+.. +++..++..++++++.+.|++++...
T Consensus 248 ~~G~~~~~~-~~~~~~~~~~--------~~~~~~~--~~~~~~~~~~~l~~--~~~~~~~~~~~~~~l~~~L~~~~~~~- 313 (375)
T 2eh6_A 248 PIGAILARE-EVAQSFTPGS--------HGSTFGG--NPLACRAGTVVVDE--VEKLLPHVREVGNYFKEKLKELGKGK- 313 (375)
T ss_dssp CCEEEEEEH-HHHTTCCTTS--------CCCSSTT--CHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHTTSSE-
T ss_pred CeEEEEEcH-HHHhhhcCCC--------CCCCCCC--CHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhcCC-
Confidence 899998864 3333221100 0000111 22333222222211 12566777788999999998864322
Q ss_pred EcCCCeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhcCcEEEEEEEECCEeEEEEEecCCCCCc
Q 048438 159 VFPCHFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINASGKAYMTNVVLGGIYAIRFATGATLTEE 237 (239)
Q Consensus 159 ~~~~~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~ 237 (239)
+ ++..+++.+.++... . .+.+.|.++|...... +..++|++++...|.+
T Consensus 314 ~-~~~g~~~~~~~~~~~---------------------~----~~~~~l~~~gi~~~~~----~~~~iRi~~~~~~~~~ 362 (375)
T 2eh6_A 314 V-KGRGLMLGLELEREC---------------------K----DYVLKALEKGLLINCT----AGKVLRFLPPLIIQKE 362 (375)
T ss_dssp E-EEETTEEEEECSSCC---------------------H----HHHHHHHHTTEECEEE----TTTEEEECCCTTCCHH
T ss_pred c-eEEEEEEEEEEcCcH---------------------H----HHHHHHHHCCCEEecC----CCCEEEEECCCCCCHH
Confidence 2 334567777765321 1 4566666666554322 4568999976545443
No 92
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=99.42 E-value=1.8e-13 Score=118.53 Aligned_cols=150 Identities=15% Similarity=0.162 Sum_probs=96.9
Q ss_pred cEEEEEecCCCCcccccChhHHHHHHHHhC-CEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCccc--ce
Q 048438 5 PLFLCATIGTTAITAVDPLKPLCDVAKQFG-IWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATLD--CC 81 (239)
Q Consensus 5 p~~vv~t~gtt~~G~i~pl~~i~~i~~~~g-i~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g--~g 81 (239)
+-+|++...+|.+|.+.|+++|+++|+++| ++++||.+|+.+....+ +. + ++|+++.++||++++|.+ +|
T Consensus 152 t~~v~~~~p~nptG~~~~l~~i~~la~~~g~~~livD~~~~~~~~~~~-----~~-~-~~div~~S~sK~~~g~~~~~~G 224 (403)
T 3cog_A 152 TKLVWIETPTNPTQKVIDIEGCAHIVHKHGDIILVVDNTFMSPYFQRP-----LA-L-GADISMYSATKYMNGHSDVVMG 224 (403)
T ss_dssp EEEEEEESSCTTTCCCCCHHHHHHHHTSSSCCEEEEECTTTCTTTCCT-----TT-T-TCSEEEEETTTTTTCSSCCCCE
T ss_pred CeEEEEECCCCCCCeeeCHHHHHHHHHHcCCCEEEEECCCcccccCCc-----cc-c-CCeEEEEcChhhccCCCCCeEE
Confidence 567788889999999999999999999999 99999999988754222 11 2 499999999999999987 48
Q ss_pred EEEeeCcccccccccCCCCccCCCCceecCCCCCChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCCCCe-----
Q 048438 82 CLWATNPEYLKNKATESKPVVDYKDWQITLSRSFRSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSGDKRF----- 156 (239)
Q Consensus 82 ~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~----- 156 (239)
+++.+++........ +....+.....+..|.+++.+ +.+..++++..+.+..+.+.|++.+.+
T Consensus 225 ~v~~~~~~l~~~l~~----------~~~~~g~~~~~~~~~~~~~~l--~~l~~r~~~~~~n~~~l~~~l~~~~~v~~~~~ 292 (403)
T 3cog_A 225 LVSVNCESLHNRLRF----------LQNSLGAVPSPIDCYLCNRGL--KTLHVRMEKHFKNGMAVAQFLESNPWVEKVIY 292 (403)
T ss_dssp EEEECCHHHHHHHHH----------HHHHHCCCCCHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHHTCTTEEEEEC
T ss_pred EEEECcHHHHHHHHH----------HHHhcCCCCCHHHHHHHHhhh--hHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEC
Confidence 888765544332210 000011112234445544433 233445555566666666666655433
Q ss_pred ---------EEEcC---CCeeEEEEEEcC
Q 048438 157 ---------EVVFP---CHFAVVCFRVSP 173 (239)
Q Consensus 157 ---------~~~~~---~~~~iv~f~~~~ 173 (239)
++..+ ...++++|.+++
T Consensus 293 ~~L~~~p~~~~~~~~~~~~g~~~~~~l~~ 321 (403)
T 3cog_A 293 PGLPSHPQHELVKRQCTGCTGMVTFYIKG 321 (403)
T ss_dssp TTSTTSTTHHHHHHHCSCCCSEEEEEESS
T ss_pred CCCCCCCcHHHHHhcCCCCceEEEEEecC
Confidence 22211 126789998864
No 93
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.41 E-value=9.1e-13 Score=113.76 Aligned_cols=149 Identities=17% Similarity=0.209 Sum_probs=99.2
Q ss_pred cEEEEEecCCCCcccccChhHHHHHHHHh----CCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCccc-
Q 048438 5 PLFLCATIGTTAITAVDPLKPLCDVAKQF----GIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATLD- 79 (239)
Q Consensus 5 p~~vv~t~gtt~~G~i~pl~~i~~i~~~~----gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g- 79 (239)
+.+|++...+|.+|.+.|+++|+++|+++ |+++|+|++|+.+... + ...+ ++|+++.++||+++ |.|
T Consensus 139 t~lv~~~~~~nptG~~~~l~~i~~la~~~~~~~~~~livD~a~~~~~~~-~-----~~~~-~~di~~~S~sK~~g-~~G~ 210 (393)
T 1n8p_A 139 TKLVWIETPTNPTLKVTDIQKVADLIKKHAAGQDVILVVDNTFLSPYIS-N-----PLNF-GADIVVHSATKYIN-GHSD 210 (393)
T ss_dssp EEEEEECSSCTTTCCCCCHHHHHHHHHHHTTTTTCEEEEECTTTHHHHC-C-----GGGG-TCSEEEEETTTTTT-CSSC
T ss_pred ceEEEEECCCCCcceecCHHHHHHHHHHhCCCCCCEEEEeCCccccccC-C-----HHHc-CCeEEEEECccccc-CCCC
Confidence 56788888999999999999999999999 9999999999987653 1 1122 39999999999976 545
Q ss_pred -c-eEEEeeCcccccccccCCCCccCCCCceecCCCCCChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCCCC-e
Q 048438 80 -C-CCLWATNPEYLKNKATESKPVVDYKDWQITLSRSFRSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSGDKR-F 156 (239)
Q Consensus 80 -~-g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g-~ 156 (239)
. |+++.++++.+..... .....+........+.+++.+ +.+..++++..+.++++.+.|++.+. +
T Consensus 211 rigG~~~~~~~~~~~~l~~----------~~~~~g~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~l~~~L~~~~~~l 278 (393)
T 1n8p_A 211 VVLGVLATNNKPLYERLQF----------LQNAIGAIPSPFDAWLTHRGL--KTLHLRVRQAALSANKIAEFLAADKENV 278 (393)
T ss_dssp CCCEEEEESCHHHHHHHHH----------HHHHHCCCCCHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHTSCTTTE
T ss_pred ceeEEEEeCCHHHHHHHHH----------HHHhcCCCCCHHHHHHHHhcc--chHHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 5 7776654444333211 000111222334444433332 33456667777788888888888765 5
Q ss_pred EEE-cC-----C------------C-eeEEEEEEcC
Q 048438 157 EVV-FP-----C------------H-FAVVCFRVSP 173 (239)
Q Consensus 157 ~~~-~~-----~------------~-~~iv~f~~~~ 173 (239)
.-+ .| + . .++++|.+++
T Consensus 279 ~~v~~p~l~~~~~~~~~~~~~~~~~~~~i~~~~l~~ 314 (393)
T 1n8p_A 279 VAVNYPGLKTHPNYDVVLKQHRDALGGGMISFRIKG 314 (393)
T ss_dssp EEEECTTSTTSTTHHHHHHHSGGGCCCSEEEEEESS
T ss_pred eEEECCCCCCCccHHHHHhhCCCCCCccEEEEEeCC
Confidence 422 22 1 2 6799999975
No 94
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=99.41 E-value=3.6e-12 Score=109.48 Aligned_cols=188 Identities=10% Similarity=0.030 Sum_probs=111.0
Q ss_pred cEEEEEecCCCCcccccC----hhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCcccc
Q 048438 5 PLFLCATIGTTAITAVDP----LKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATLDC 80 (239)
Q Consensus 5 p~~vv~t~gtt~~G~i~p----l~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~ 80 (239)
+.+|+++...+.+|.+.| +++|+++|++||+++++|++|++.............++ .+|++ ++||+++++.++
T Consensus 186 ~~~v~~~~~~~~tG~~~~~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~-~~d~~--s~sK~~~~g~~~ 262 (395)
T 1vef_A 186 TAAVILEPVQGEGGVRPATPEFLRAAREITQEKGALLILDEIQTGMGRTGKRFAFEHFGI-VPDIL--TLAKALGGGVPL 262 (395)
T ss_dssp EEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTC-CCSEE--EECGGGGTTSSC
T ss_pred EEEEEEeCccCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCccCCchhHhhhcCC-CCCEE--EEcccccCCCce
Confidence 567777777778999888 99999999999999999999983211111000012232 37877 459999988889
Q ss_pred eEEEeeCcccccccccCCCCccCCCCceecCCCC-CChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCCCC--eE
Q 048438 81 CCLWATNPEYLKNKATESKPVVDYKDWQITLSRS-FRSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSGDKR--FE 157 (239)
Q Consensus 81 g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g--~~ 157 (239)
|++++++ +.+...... ......+.. ........+++.+.. ++..++..++++++.+.|++++. +.
T Consensus 263 G~~~~~~-~~~~~l~~~--------~~~~~~~~~~~~~~a~~~al~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~ 330 (395)
T 1vef_A 263 GVAVMRE-EVARSMPKG--------GHGTTFGGNPLAMAAGVAAIRYLER---TRLWERAAELGPWFMEKLRAIPSPKIR 330 (395)
T ss_dssp EEEEEEH-HHHHTSCTT--------SSCCSSTTCHHHHHHHHHHHHHHHH---HTTHHHHHHHHHHHHHHHHTSCCTTEE
T ss_pred EEEEehH-HHHhhhccC--------CcCCCcCCCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHhhcCceE
Confidence 9999864 333322110 000000001 112223334444322 34566777899999999988632 11
Q ss_pred EEcCCCeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHH-hcCcEEEEEEEECCEeEEEEEecCCCCC
Q 048438 158 VVFPCHFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESIN-ASGKAYMTNVVLGGIYAIRFATGATLTE 236 (239)
Q Consensus 158 ~~~~~~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~g~~~lR~~~~~~~t~ 236 (239)
. .++..+++.|.++... . .+.+.|. ++|..+.. .+..++|++++...|.
T Consensus 331 ~-~~~~g~~~~~~~~~~~---------------------~----~l~~~l~~~~gi~v~~----~~~~~iRi~~~~~~~~ 380 (395)
T 1vef_A 331 E-VRGMGLMVGLELKEKA---------------------A----PYIARLEKEHRVLALQ----AGPTVIRFLPPLVIEK 380 (395)
T ss_dssp E-EEEETTEEEEEESSCS---------------------H----HHHHHHHHHHCEECEE----SSTTEEEECCCTTCCH
T ss_pred E-EEEEEEEEEEEEcChH---------------------H----HHHHHHHHHCCeEEec----CCCCEEEEeCCCCCCH
Confidence 1 1234467888875421 2 4566666 56654432 2467899997654444
Q ss_pred c
Q 048438 237 E 237 (239)
Q Consensus 237 ~ 237 (239)
+
T Consensus 381 ~ 381 (395)
T 1vef_A 381 E 381 (395)
T ss_dssp H
T ss_pred H
Confidence 3
No 95
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=99.41 E-value=1.6e-11 Score=106.35 Aligned_cols=150 Identities=15% Similarity=0.255 Sum_probs=100.0
Q ss_pred cEEEEEecCCCCcccccChhHHHHHHHH-hCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCccc--ce
Q 048438 5 PLFLCATIGTTAITAVDPLKPLCDVAKQ-FGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATLD--CC 81 (239)
Q Consensus 5 p~~vv~t~gtt~~G~i~pl~~i~~i~~~-~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g--~g 81 (239)
+-+|+++..+|.+|.+.|+++|+++|++ +|+++++|++|+.+....+ .. + ++|+++.++||++++|.+ +|
T Consensus 148 t~~v~l~~p~NptG~v~~l~~i~~la~~~~~~~li~De~~~~~~~~~~-----~~-~-~~di~~~S~sK~~~~~g~ri~G 220 (404)
T 1e5e_A 148 TKIVYFETPANPTLKIIDMERVCKDAHSQEGVLVIADNTFCSPMITNP-----VD-F-GVDVVVHSATKYINGHTDVVAG 220 (404)
T ss_dssp EEEEEEESSCTTTCCCCCHHHHHHHHHTSTTCEEEEECTTTCTTTCCG-----GG-G-TCSEEEEETTTTTTCSSCCCCE
T ss_pred CcEEEEECCCCCCCcccCHHHHHHHHHhhcCCEEEEECCCchhhhCCc-----cc-c-CCEEEEEcCccccCCCCCCeEE
Confidence 5678888899999999999999999999 9999999999997764322 11 2 399999999999999877 68
Q ss_pred EEEeeCccccc-ccccCCCCccCCCCceecCCCCCChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCCCCeE-EE
Q 048438 82 CLWATNPEYLK-NKATESKPVVDYKDWQITLSRSFRSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSGDKRFE-VV 159 (239)
Q Consensus 82 ~l~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~-~~ 159 (239)
++++++ +.+. ...... ..+ .+.....+..|.++..+. .+..+.++..++++++.+.|++.+.+. ++
T Consensus 221 ~~~~~~-~~~~~~l~~~~------~~~---~g~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~~l~~~l~~~~~v~~~~ 288 (404)
T 1e5e_A 221 LICGKA-DLLQQIRMVGI------KDI---TGSVISPHDAWLITRGLS--TLNIRMKAESENAMKVAEYLKSHPAVEKVY 288 (404)
T ss_dssp EEEECH-HHHHHHHHTCC------CCC---CCCCCCHHHHHHHHHHHT--THHHHHHHHHHHHHHHHHHHHTCTTEEEEE
T ss_pred EEEECH-HHHHHHHHHHH------HhC---CCCCCCHHHHHHHHHhHh--HHHHHHHHHHHHHHHHHHHHHhCCCeeEEE
Confidence 888753 3333 221100 001 011122344455544432 245566666778888888888765553 22
Q ss_pred cC------------C----CeeEEEEEEcC
Q 048438 160 FP------------C----HFAVVCFRVSP 173 (239)
Q Consensus 160 ~~------------~----~~~iv~f~~~~ 173 (239)
.+ + ..++++|.+++
T Consensus 289 ~~~L~~~p~~~~~~~~~~~~g~~~~~~~~~ 318 (404)
T 1e5e_A 289 YPGFEDHEGHDIAKKQMRMYGSMITFILKS 318 (404)
T ss_dssp CTTCSSSTTHHHHHHHCSSCCSEEEEEETT
T ss_pred CCCCCCCccHHHHHhhCCCCceEEEEEeCC
Confidence 21 1 27889998753
No 96
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=99.40 E-value=7.3e-12 Score=108.90 Aligned_cols=149 Identities=11% Similarity=0.128 Sum_probs=101.7
Q ss_pred cEEEEEecCCCCcccccChhHHHHHHHH--hCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCccc--c
Q 048438 5 PLFLCATIGTTAITAVDPLKPLCDVAKQ--FGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATLD--C 80 (239)
Q Consensus 5 p~~vv~t~gtt~~G~i~pl~~i~~i~~~--~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g--~ 80 (239)
+.+|++...+|.+|.+.|+++|+++|++ +|+++|||++|+.+....+ +. + ++|++++++||+++++.+ .
T Consensus 168 tklV~~e~~~NptG~v~dl~~I~~la~~~~~g~~livD~a~a~~~~~~p-----~~-~-g~Div~~S~sK~lg~~g~~~~ 240 (415)
T 2fq6_A 168 TKIVFLESPGSITMEVHDVPAIVAAVRSVVPDAIIMIDNTWAAGVLFKA-----LD-F-GIDVSIQAATKYLVGHSDAMI 240 (415)
T ss_dssp EEEEEEESSCTTTCCCCCHHHHHHHHHHHCTTCEEEEECTTTTTTSSCG-----GG-G-TCSEEEEETTTTTTCSSSCCC
T ss_pred CcEEEEECCCCCCCEeecHHHHHHHHHhhcCCCEEEEECCCcccccCCc-----cc-c-CCeEEEEeCccccCCCCCceE
Confidence 5677788889999999999999999999 9999999999986533212 11 1 499999999999887654 5
Q ss_pred eEEEeeCcccccccccCCCCccCCCCceecCCCCCChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEE-
Q 048438 81 CCLWATNPEYLKNKATESKPVVDYKDWQITLSRSFRSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSGDKRFEVV- 159 (239)
Q Consensus 81 g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~~~- 159 (239)
|+++.++ +.+..... +....+........|..++. .+.+..++++..++++++.+.|++.|.++-+
T Consensus 241 G~l~~~~-~~~~~l~~----------~~~~~G~~~~~~~a~~~~~~--l~~l~~r~~~~~~n~~~l~~~L~~~~~v~~v~ 307 (415)
T 2fq6_A 241 GTAVCNA-RCWEQLRE----------NAYLMGQMVDADTAYITSRG--LRTLGVRLRQHHESSLKVAEWLAEHPQVARVN 307 (415)
T ss_dssp EEEEECT-TTHHHHHH----------HHHHTTCCCCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHTCTTEEEEE
T ss_pred EEEEeCH-HHHHHHHH----------HHHhcCCCCCHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHHHHcCCCeeEEE
Confidence 7777654 33322210 00001122223344444432 3456677788888899999999888776532
Q ss_pred cC----------------CCeeEEEEEEcC
Q 048438 160 FP----------------CHFAVVCFRVSP 173 (239)
Q Consensus 160 ~~----------------~~~~iv~f~~~~ 173 (239)
.| ...++++|.+++
T Consensus 308 ~p~l~~~~~~~~~~~~~~~~g~i~sf~l~g 337 (415)
T 2fq6_A 308 HPALPGSKGHEFWKRDFTGSSGLFSFVLKK 337 (415)
T ss_dssp CTTSTTSTTHHHHHHHCSCCCSEEEEEESS
T ss_pred CCCCCCCccHHHHHhhCCCCceEEEEEECC
Confidence 22 136799999975
No 97
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=99.40 E-value=2e-13 Score=115.14 Aligned_cols=189 Identities=18% Similarity=0.201 Sum_probs=107.2
Q ss_pred ccEEEEEecCCCCc-ccccCh---hHHHHHHHHhCCEEEEecccccccccCc--ccccccCCCCCcceEEEcCcccCCCc
Q 048438 4 IPLFLCATIGTTAI-TAVDPL---KPLCDVAKQFGIWVHVDAAYAGSACIFP--EFRHFIDGVEGADSFSLNAHKWFFAT 77 (239)
Q Consensus 4 ~p~~vv~t~gtt~~-G~i~pl---~~i~~i~~~~gi~lhvD~A~~~~~~~~~--~~~~~~~~~~~~Ds~~~~~hK~l~~P 77 (239)
.+.+|+.+..+|.+ |.+.|+ ++|+++|++||+++++|+||..+..... ....... .+|++++++||++++|
T Consensus 132 ~~~~v~~~~~~npt~G~~~~~~~l~~i~~~a~~~~~~li~D~a~~~~~~~~~~~~~~~~~~---~~d~~~~s~sK~l~~~ 208 (347)
T 1jg8_A 132 RTSLIAIENTHNRSGGRVVPLENIKEICTIAKEHGINVHIDGARIFNASIASGVPVKEYAG---YADSVMFCLSKGLCAP 208 (347)
T ss_dssp CEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCEEEEEETTHHHHHHHHCCCHHHHHH---TCSEEEEESSSTTCCS
T ss_pred CceEEEEeccccccCCccCcHHHHHHHHHHHHHCCCEEEeehhhhhcchhhcCCChHHhcc---cccEEEEecccccCCC
Confidence 46677788888888 998764 6889999999999999999854322110 0111111 3899999999999887
Q ss_pred ccceEEEeeCcccccccccCCCCccCCCCceecCCCCCChHHHH---HHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 048438 78 LDCCCLWATNPEYLKNKATESKPVVDYKDWQITLSRSFRSLKLW---FVIRNYGMENLRHFLRSHVNMARLFERLVSGDK 154 (239)
Q Consensus 78 ~g~g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~ 154 (239)
. |.+++.+++++...... . .....+.+..++... .+++.+ .+.+++..+.++++.+.|++.
T Consensus 209 ~--G~~~~~~~~~~~~~~~~-------~-~~~~~~~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~l~~~L~~~- 272 (347)
T 1jg8_A 209 V--GSVVVGDRDFIERARKA-------R-KMLGGGMRQAGVLAAAGIIALTKM-----VDRLKEDHENARFLALKLKEI- 272 (347)
T ss_dssp S--CEEEEECHHHHHHHHHH-------H-HHHTCCCSSTHHHHHHHHHHHHHS-----STTHHHHHHHHHHHHHHHHHH-
T ss_pred c--eEEEEcCHHHHHHHHHH-------H-HHcCCchhHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHhc-
Confidence 4 43444444443322100 0 000001111112111 123221 122333445677888888876
Q ss_pred CeEEE-cCCCeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhcCcEEEEEEEECCEeEEEEEecCC
Q 048438 155 RFEVV-FPCHFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINASGKAYMTNVVLGGIYAIRFATGAT 233 (239)
Q Consensus 155 g~~~~-~~~~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~ 233 (239)
|+++. .++..+++.+.++..+. + ...+.++|.++|...... +...+|++++..
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~---------------~-------~~~~~~~l~~~gi~v~~~----~~~~iRl~~~~~ 326 (347)
T 1jg8_A 273 GYSVNPEDVKTNMVILRTDNLKV---------------N-------AHGFIEALRNSGVLANAV----SDTEIRLVTHKD 326 (347)
T ss_dssp TCBCCGGGCCSSEEEEECTTSSS---------------C-------HHHHHHHHHHHTEECEEE----ETTEEEEECCTT
T ss_pred CceeccCCCcceEEEEEcccccC---------------C-------HHHHHHHHHHCCCEEecC----CCCeEEEEeCCC
Confidence 77653 34567888888863111 0 125666666666554432 235799998766
Q ss_pred CCCc
Q 048438 234 LTEE 237 (239)
Q Consensus 234 ~t~~ 237 (239)
.|.+
T Consensus 327 ~~~e 330 (347)
T 1jg8_A 327 VSRN 330 (347)
T ss_dssp SCHH
T ss_pred CCHH
Confidence 5554
No 98
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=99.40 E-value=1.1e-12 Score=112.22 Aligned_cols=191 Identities=10% Similarity=0.006 Sum_probs=115.4
Q ss_pred ccEEEEEecCCCCcccccC---hhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCccc-
Q 048438 4 IPLFLCATIGTTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATLD- 79 (239)
Q Consensus 4 ~p~~vv~t~gtt~~G~i~p---l~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g- 79 (239)
.+.+|+++..+|.+|.+.| +++|+++|++||+++++|++|+.+.. .........-....|+++.++||+++.| |
T Consensus 152 ~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~-g~~~~~~~~~~~~~~~~~~s~sK~~~~~-G~ 229 (381)
T 1v2d_A 152 RTRALLLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVYDELYY-GERPRRLREFAPERTFTVGSAGKRLEAT-GY 229 (381)
T ss_dssp TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBS-SSCCCCHHHHCTTTEEEEEEHHHHTTCG-GG
T ss_pred CCEEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEEcCcccccc-CCCCCCHHHhcCCCEEEEeechhhcCCc-cc
Confidence 3567777888999999876 89999999999999999999986543 1111111100124899999999997534 5
Q ss_pred -ceEEEeeCcccccccccCCCCccCCCCceecCCCCCChHHHHHHHHHhC-HHHHHHHHHHHHHHHHHHHHHHhCCCCeE
Q 048438 80 -CCCLWATNPEYLKNKATESKPVVDYKDWQITLSRSFRSLKLWFVIRNYG-MENLRHFLRSHVNMARLFERLVSGDKRFE 157 (239)
Q Consensus 80 -~g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g-~~g~~~~~~~~~~la~~l~~~l~~~~g~~ 157 (239)
+|+++++ ++.+...... .....++ ........+..+++... .+.+++..++..++++++.+.|++. |++
T Consensus 230 r~G~~~~~-~~~~~~~~~~----~~~~~~~---~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~ 300 (381)
T 1v2d_A 230 RVGWIVGP-KEFMPRLAGM----RQWTSFS---APTPLQAGVAEALKLARREGFYEALREGYRRRRDLLAGGLRAM-GLR 300 (381)
T ss_dssp CCEEEECC-TTTHHHHHHH----HHHHTSS---CCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHT-TCC
T ss_pred ceEEEEeC-HHHHHHHHHH----HhhcccC---CCcHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHHC-CCE
Confidence 7888874 3333222100 0000011 00011122223343221 3456777888889999999999984 888
Q ss_pred EEcCCCeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhcCcEEEEEEEE----CCEeEEEEEecC
Q 048438 158 VVFPCHFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINASGKAYMTNVVL----GGIYAIRFATGA 232 (239)
Q Consensus 158 ~~~~~~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~----~g~~~lR~~~~~ 232 (239)
++.+.....+.+.+++. + +.+.+.++|..+...... .+..++|+++..
T Consensus 301 ~~~~~~~~~~~~~~~~~----------------------~-----~~~~l~~~gi~v~~g~~~~~~~~~~~~iRi~~~~ 352 (381)
T 1v2d_A 301 VYVPEGTYFLMAELPGW----------------------D-----AFRLVEEARVALIPASAFYLEDPPKDLFRFAFCK 352 (381)
T ss_dssp EECCSBSSEEEEECTTC----------------------C-----HHHHHHHTCEECEEGGGGCSSSCCTTEEEEECCS
T ss_pred ecCCCcceEEEEecChH----------------------h-----HHHHHHhCCEEEecchHhCCCCCCCCEEEEEeCC
Confidence 87654445666666431 1 333455566554433222 135689999876
No 99
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=99.40 E-value=3.7e-12 Score=111.26 Aligned_cols=161 Identities=14% Similarity=0.081 Sum_probs=105.3
Q ss_pred ccEEEEEecCCCCcccccChhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCcc--cce
Q 048438 4 IPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATL--DCC 81 (239)
Q Consensus 4 ~p~~vv~t~gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~--g~g 81 (239)
.+-+|++...+|.+|.+.|+++|+++|+++|++++||++|+.+.+.-+ ... ++|+++.|++|++++|. -.|
T Consensus 167 ~t~~v~~e~p~NptG~~~dl~~i~~la~~~g~~livD~a~~~~~~~~~----~~~---g~div~~S~sK~l~g~g~~~gG 239 (430)
T 3ri6_A 167 TTKLLFLETISNPQLQVADLEALSKVVHAKGIPLVVDTTMTPPYLLEA----KRL---GVDIEVLSSTKFISGGGTSVGG 239 (430)
T ss_dssp TEEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEECTTSCTTTCCG----GGG---TCSEEEEECCCEEETTEEECCE
T ss_pred CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcccccCCh----HHc---CCEEEEECCcccccCCCCceEE
Confidence 356788888999999999999999999999999999999987765222 111 38999999999998762 345
Q ss_pred EEEeeCc-ccccccc-cC------CCCccC--CCCceecCCCCCChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHh
Q 048438 82 CLWATNP-EYLKNKA-TE------SKPVVD--YKDWQITLSRSFRSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVS 151 (239)
Q Consensus 82 ~l~~~~~-~~l~~~~-~~------~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~ 151 (239)
+++.+.. .+..... .. ...... ...+....+.....+..|..++ +.+.+..++++..++++++.+.|+
T Consensus 240 ~vv~~~~~~~~~~~~~~~l~~~~g~~~~i~~~~~~~~~~~g~~~~~~~a~l~l~--~l~~l~~r~~~~~~na~~la~~L~ 317 (430)
T 3ri6_A 240 VLIDHGLFEWKSLPSLAPYYAKAGPMAFLYKARKEVFQNLGPSLSPHNAYLQSL--GLETMALRIERSCQNAQELAHWLL 317 (430)
T ss_dssp EEEECSCSCGGGSTTTHHHHHHHGGGHHHHHHHHTHHHHHCCCCCHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEECChHHhhhccchhhhhhhhchhhHHHHHHHHHHHhcCCCCCHHHHHHHHh--hhhhHHHHHHHHHHHHHHHHHHHh
Confidence 5443322 2210000 00 000000 0000011122334455555554 456778888999999999999999
Q ss_pred CCCCeEEEcCCC----------------ee-EEEEEEcC
Q 048438 152 GDKRFEVVFPCH----------------FA-VVCFRVSP 173 (239)
Q Consensus 152 ~~~g~~~~~~~~----------------~~-iv~f~~~~ 173 (239)
+.|+++-+..|. .+ +++|.+++
T Consensus 318 ~~p~v~~V~~P~l~~~p~~~~~~~~~g~Gg~~lsf~l~~ 356 (430)
T 3ri6_A 318 SIPQVKCVNHPSLPDSPFYAIAKRQFRYAGSILTFELES 356 (430)
T ss_dssp TCTTCEEEECTTSTTSTTHHHHHHHCSSCCSEEEEECSS
T ss_pred CCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECC
Confidence 999988554332 34 99999973
No 100
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=99.40 E-value=7.1e-13 Score=114.62 Aligned_cols=155 Identities=12% Similarity=0.082 Sum_probs=98.5
Q ss_pred cEEEEEecCCCCcccccChhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCcccceEEE
Q 048438 5 PLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLW 84 (239)
Q Consensus 5 p~~vv~t~gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~ 84 (239)
|-+|+++. +..|...++++|.++|++||+++++|++|+.+........... ..+|+++.++||++.+|.+ |+++
T Consensus 173 ~~~v~~~~--~~~~~~~~l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~~~---~~~di~~~s~sK~l~g~~~-g~~~ 246 (425)
T 3ecd_A 173 PSLIIAGF--SAYPRKLDFARFRAIADSVGAKLMVDMAHIAGVIAAGRHANPV---EHAHVVTSTTHKTLRGPRG-GFVL 246 (425)
T ss_dssp CSEEEEEC--SCCCSCCCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGG---GTCSEEEEESSGGGCCCSC-EEEE
T ss_pred CcEEEEcc--ccCCCcCCHHHHHHHHHHcCCEEEEECcChHhhhhcccccCch---hcCcEEEecCCcccCCCCc-EEEE
Confidence 34555543 3348999999999999999999999999877655332221112 2389999999999988874 7777
Q ss_pred eeCcccccccccCCCCccCCCCceecCCCC-CChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEcC-C
Q 048438 85 ATNPEYLKNKATESKPVVDYKDWQITLSRS-FRSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSGDKRFEVVFP-C 162 (239)
Q Consensus 85 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~~~~~-~ 162 (239)
..++......... . . ....++.. ....++..++..+..+++++..++..++++++.+.|.+. |++++.+ .
T Consensus 247 ~~~~~~~~~~~~~----~--~-~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~ 318 (425)
T 3ecd_A 247 TNDEEIAKKINSA----V--F-PGLQGGPLMHVIAGKAVAFGEALTDDFKTYIDRVLANAQALGDVLKAG-GVDLVTGGT 318 (425)
T ss_dssp ESCHHHHHHHHHH----H--C------CCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSC
T ss_pred eCCHHHHHHHHhh----h--C-ccccCCccHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhC-CCeeccCCC
Confidence 6544332221100 0 0 00000111 112333444444444667788888889999999999984 8888754 3
Q ss_pred CeeEEEEEEcC
Q 048438 163 HFAVVCFRVSP 173 (239)
Q Consensus 163 ~~~iv~f~~~~ 173 (239)
..+++.+.+++
T Consensus 319 ~~~~~~~~~~~ 329 (425)
T 3ecd_A 319 DNHLLLVDLRP 329 (425)
T ss_dssp SSSEEEEECGG
T ss_pred CceEEEEEeCC
Confidence 56777777754
No 101
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=99.40 E-value=3e-12 Score=111.28 Aligned_cols=197 Identities=13% Similarity=0.023 Sum_probs=117.1
Q ss_pred ccEEEEEecCCCCcccccC---hhHHHHHHHHhCCEEEEecccccccccCccc---ccccC-----CCCCcc--eEEEcC
Q 048438 4 IPLFLCATIGTTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSACIFPEF---RHFID-----GVEGAD--SFSLNA 70 (239)
Q Consensus 4 ~p~~vv~t~gtt~~G~i~p---l~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~---~~~~~-----~~~~~D--s~~~~~ 70 (239)
.+-+|+++..+|.+|.+.| +++|+++|+++|+++++|.+|+.+....... ..... ++ ..| +++.++
T Consensus 188 ~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~-~~d~viv~~s~ 266 (428)
T 1iay_A 188 KVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYC-NKDLVHIVYSL 266 (428)
T ss_dssp CEEEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGGGCCSSSCCCCHHHHHTSGGGTTS-CTTSEEEEEES
T ss_pred ceEEEEEcCCCCCCCCcCCHHHHHHHHHHHHHCCeEEEEeccccccccCCCCccCHHHhccccccccC-CCCcEEEEecc
Confidence 4667777888899999999 9999999999999999999998743321111 11111 11 167 788999
Q ss_pred cccCCCc-ccceEEEeeCcccccccccCCCCccCCCCceecCCCCCChHHHHHHHHHhCH-----HHHHHHHHHHHHHHH
Q 048438 71 HKWFFAT-LDCCCLWATNPEYLKNKATESKPVVDYKDWQITLSRSFRSLKLWFVIRNYGM-----ENLRHFLRSHVNMAR 144 (239)
Q Consensus 71 hK~l~~P-~g~g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~-----~g~~~~~~~~~~la~ 144 (239)
||+++.| ..+|+++..++..+...... . ..++ ...+....+...+.. +.+++..++..++.+
T Consensus 267 sK~~g~~Glr~G~~~~~~~~~~~~~~~~----~--~~~~------~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~ 334 (428)
T 1iay_A 267 SKDMGLPGFRVGIIYSFNDDVVNCARKM----S--SFGL------VSTQTQYFLAAMLSDEKFVDNFLRESAMRLGKRHK 334 (428)
T ss_dssp TTTSSCGGGCEEEEEESCHHHHHHHHHH----H--TTSC------CCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhcCCCCceEEEEEeCCHHHHHHHHHH----H--hccc------CCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHH
Confidence 9998644 22588877544433322110 0 0010 112222333333321 245667777788899
Q ss_pred HHHHHHhCCCCeEEEcCCCeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhc-CcEEEEEEEEC--
Q 048438 145 LFERLVSGDKRFEVVFPCHFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINAS-GKAYMTNVVLG-- 221 (239)
Q Consensus 145 ~l~~~l~~~~g~~~~~~~~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~-- 221 (239)
++.+.|++. |++++.+...+++.++++.... ..+ ......+.+.|.++ |..+.......
T Consensus 335 ~l~~~L~~~-g~~~~~~~~g~~~~~~~~~~~~-------------~~~----~~~~~~l~~~l~~~~gi~v~~~~~~~~~ 396 (428)
T 1iay_A 335 HFTNGLEVV-GIKCLKNNAGLFCWMDLRPLLR-------------EST----FDSEMSLWRVIINDVKLNVSPGSSFECQ 396 (428)
T ss_dssp HHHHHHHHT-TCCBCCCSSSSEEEEECGGGCS-------------SSS----HHHHHHHHHHHHHTSCEECEEGGGGTCS
T ss_pred HHHHHHHhc-CCcccCCCeeEEEEEechhhcC-------------CCc----hhHHHHHHHHHHHhCCEEEeCchhhCCC
Confidence 999999987 8876544356677788754210 000 01223577778776 55544322221
Q ss_pred CEeEEEEEec
Q 048438 222 GIYAIRFATG 231 (239)
Q Consensus 222 g~~~lR~~~~ 231 (239)
+..++|+++.
T Consensus 397 ~~~~iRis~~ 406 (428)
T 1iay_A 397 EPGWFRVCFA 406 (428)
T ss_dssp SSSEEEEECS
T ss_pred CCCEEEEEEe
Confidence 2468999987
No 102
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.39 E-value=2.9e-12 Score=110.56 Aligned_cols=155 Identities=11% Similarity=0.073 Sum_probs=99.4
Q ss_pred cEEEEEecCCCCcccccChhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCcccceEEE
Q 048438 5 PLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLW 84 (239)
Q Consensus 5 p~~vv~t~gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~ 84 (239)
|-+|+.+..+ .|.+.|+++|.++|++||+++++|++|+.+......... .+..+|++++++||++.+|.| |+++
T Consensus 165 ~~~v~~~~~~--~G~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~---~~~~~di~~~s~sK~l~g~~~-G~~~ 238 (417)
T 3n0l_A 165 PKLIVCGASA--YARVIDFAKFREIADEIGAYLFADIAHIAGLVVAGEHPS---PFPYAHVVSSTTHKTLRGPRG-GIIM 238 (417)
T ss_dssp CSEEEECCSS--CCSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCC---CTTTCSEEEEESSTTTCSCSC-EEEE
T ss_pred CeEEEECCcc--cCccCCHHHHHHHHHHcCCEEEEECccchhhhhcccCCC---ccccceEEEeeCccccCCCCe-eEEE
Confidence 4455555544 499999999999999999999999998766553221111 112489999999999988875 7777
Q ss_pred eeCcccccccccCCCCccCCCCceecCCCC-CChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEcC-C
Q 048438 85 ATNPEYLKNKATESKPVVDYKDWQITLSRS-FRSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSGDKRFEVVFP-C 162 (239)
Q Consensus 85 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~~~~~-~ 162 (239)
..++.......... .... .++.. ....++..++.....+.++++.++..++++++.+.|.+ .|++++.+ .
T Consensus 239 ~~~~~~~~~~~~~~------~~~~-~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~~~~ 310 (417)
T 3n0l_A 239 TNDEELAKKINSAI------FPGI-QGGPLMHVIAAKAVGFKFNLSDEWKVYAKQVRTNAQVLANVLMD-RKFKLVSDGT 310 (417)
T ss_dssp ESCHHHHHHHHHHH------TTTT-CSSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHH-TTCEEGGGSC
T ss_pred ECCHHHHHHHhhhh------CCcc-cCCcHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh-CCceeccCCC
Confidence 75444332221100 0000 01111 11223344454444456778888888999999999998 58887753 3
Q ss_pred CeeEEEEEEcC
Q 048438 163 HFAVVCFRVSP 173 (239)
Q Consensus 163 ~~~iv~f~~~~ 173 (239)
..+++.+.+.+
T Consensus 311 ~~~~~~~~~~~ 321 (417)
T 3n0l_A 311 DNHLVLMSFLD 321 (417)
T ss_dssp SSSEEEEECTT
T ss_pred CceEEEEEccc
Confidence 45677777654
No 103
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=99.39 E-value=2.4e-11 Score=102.83 Aligned_cols=189 Identities=11% Similarity=-0.004 Sum_probs=118.0
Q ss_pred cEEEEEecCCCCcccccC---hhHHHHHHHHhCCEEEEecccccccccCccccc-ccCCCCCcceEEEcCcccCCCc-cc
Q 048438 5 PLFLCATIGTTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRH-FIDGVEGADSFSLNAHKWFFAT-LD 79 (239)
Q Consensus 5 p~~vv~t~gtt~~G~i~p---l~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~-~~~~~~~~Ds~~~~~hK~l~~P-~g 79 (239)
+-+|+++..+|.+|.+.| +++|+++|++||+++++|++|+.+... ..... ...+....+.++.+++|.++.| ..
T Consensus 145 ~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~-~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r 223 (361)
T 3ftb_A 145 VDSVIIGNPNNPNGGLINKEKFIHVLKLAEEKKKTIIIDEAFIEFTGD-PSSSFVGEIKNYSCLFIIRAMTKFFAMPGIR 223 (361)
T ss_dssp CSEEEEETTBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECSSGGGTCC-TTSSSGGGTTTCSSEEEEEESSSTTSCGGGC
T ss_pred CCEEEEeCCCCCCCCCCCHHHHHHHHHHhhhcCCEEEEECcchhhcCC-cccchhHhcccCCCEEEEeeChhhcCCCCcc
Confidence 446778888999999876 666778888999999999999865542 11000 0111112447788999998633 45
Q ss_pred ceEEEeeCcccccccccCCCCccCCCCceecCCCCCChHHHHHHHHHhC-HHHHHHHHHHHHHHHHHHHHHHhCCCCeE-
Q 048438 80 CCCLWATNPEYLKNKATESKPVVDYKDWQITLSRSFRSLKLWFVIRNYG-MENLRHFLRSHVNMARLFERLVSGDKRFE- 157 (239)
Q Consensus 80 ~g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g-~~g~~~~~~~~~~la~~l~~~l~~~~g~~- 157 (239)
+|++++.+++......... ..+ ....+....+...+. .+.++++.++..++.+++.+.|+++++++
T Consensus 224 ~g~~~~~~~~~~~~~~~~~------~~~------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 291 (361)
T 3ftb_A 224 FGYGITNNKEIAAKIKAKQ------NPW------NINCFAEMAAINCLKDTNYIEESLLWIKKERKRFIEELNKIGFIKR 291 (361)
T ss_dssp CEEEEESCHHHHHHHHTTS------CTT------CSCHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHSSSEEE
T ss_pred eeEEEeCCHHHHHHHHhhC------CCC------CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCCce
Confidence 6777645554443332110 001 112233333333332 45667788888899999999999988998
Q ss_pred EEcCCCeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhcCcEEEEEEEE--CCEeEEEEEec
Q 048438 158 VVFPCHFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINASGKAYMTNVVL--GGIYAIRFATG 231 (239)
Q Consensus 158 ~~~~~~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~--~g~~~lR~~~~ 231 (239)
+. ++..+++.+.++... ...+.+.|.++|....+.... .+..++|+++.
T Consensus 292 ~~-~~~~~~~~~~~~~~~------------------------~~~l~~~l~~~gi~v~~g~~~~~~~~~~iRis~~ 342 (361)
T 3ftb_A 292 VF-SPHANFVLCRLENIS------------------------GEKLYDSLLKEDIVIRRCCNFIGLDDSFVRFAIK 342 (361)
T ss_dssp EE-CCSSSEEEEEESSSC------------------------HHHHHHHHHTTTEECEECTTSTTCCTTEEEEECC
T ss_pred ec-CCCCeEEEEEcCCCC------------------------HHHHHHHHHHCCeEEeeCccCCCCCCCEEEEEcC
Confidence 55 566778888886521 125667777776554433222 23578999976
No 104
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.39 E-value=1.4e-12 Score=112.04 Aligned_cols=188 Identities=9% Similarity=0.025 Sum_probs=113.9
Q ss_pred cEEEEEecCCCCcccccC---hhHHHHHHHHhCCEEEEecccccccccCc--ccccccCCCCCcceEEEcCcccCCCccc
Q 048438 5 PLFLCATIGTTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSACIFP--EFRHFIDGVEGADSFSLNAHKWFFATLD 79 (239)
Q Consensus 5 p~~vv~t~gtt~~G~i~p---l~~i~~i~~~~gi~lhvD~A~~~~~~~~~--~~~~~~~~~~~~Ds~~~~~hK~l~~P~g 79 (239)
+-+|+++..+|.+|.+.| +++|+++|+++|+++++|++|+.+....+ .... +.+....|+++.++||+++ +.|
T Consensus 175 ~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~-~~~~~~~~i~~~s~sK~~~-~~G 252 (389)
T 1o4s_A 175 TKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILD-VSEGFDRIVYINGFSKSHS-MTG 252 (389)
T ss_dssp EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCSSCCCCHHH-HCSSSTTEEEEEESTTTTT-CGG
T ss_pred ceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCHhh-cCCCCCcEEEEeechhhcC-Ccc
Confidence 456777888899999977 99999999999999999999987654211 1111 2222348999999999985 445
Q ss_pred --ceEEEeeCcccccccccCCCCccCCCCceecCCCCCChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCCCCeE
Q 048438 80 --CCCLWATNPEYLKNKATESKPVVDYKDWQITLSRSFRSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSGDKRFE 157 (239)
Q Consensus 80 --~g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~ 157 (239)
+|+++++ ++.+...... .....-....+..+.+...+.. ++++..++..++.+++.+.|++. |++
T Consensus 253 ~r~G~l~~~-~~~~~~l~~~----------~~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~l~~~L~~~-g~~ 319 (389)
T 1o4s_A 253 WRVGYLISS-EKVATAVSKI----------QSHTTSCINTVAQYAALKALEV-DNSYMVQTFKERKNFVVERLKKM-GVK 319 (389)
T ss_dssp GCCEEEECC-HHHHHHHHHH----------HHHHTCSCCHHHHHHHHHHTTC-CCHHHHHHHHHHHHHHHHHHHHT-TCC
T ss_pred cceEEEEeC-HHHHHHHHHH----------hhhcccCCCHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHhc-CCe
Confidence 7888874 3333222100 0000001122333334444432 25666777788999999999887 887
Q ss_pred EEcCCCeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHH-hcCcEEEEEEEECCEeEEEEEecC
Q 048438 158 VVFPCHFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESIN-ASGKAYMTNVVLGGIYAIRFATGA 232 (239)
Q Consensus 158 ~~~~~~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~g~~~lR~~~~~ 232 (239)
++.+....++.+.++ .. ...+.+.|. ++|..+..........++|+++.+
T Consensus 320 ~~~~~~~~~~~~~~~-~~------------------------~~~l~~~l~~~~gi~v~~g~~f~~~~~~Ris~~~ 370 (389)
T 1o4s_A 320 FVEPEGAFYLFFKVR-GD------------------------DVKFCERLLEEKKVALVPGSAFLKPGFVRLSFAT 370 (389)
T ss_dssp CCCCSBSSEEEEECS-SC------------------------HHHHHHHHHHHHCEECEEGGGGTCTTEEEEECCS
T ss_pred eecCCcceEEEEeCC-CC------------------------HHHHHHHHHHHCCEEEeCchhcCCCCeEEEEEeC
Confidence 664433334555654 11 125666665 556554433222212489999874
No 105
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=99.39 E-value=4.1e-12 Score=109.99 Aligned_cols=151 Identities=16% Similarity=0.193 Sum_probs=104.9
Q ss_pred ccEEEEEecCCCCcccccChhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCcc-c-ce
Q 048438 4 IPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATL-D-CC 81 (239)
Q Consensus 4 ~p~~vv~t~gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~-g-~g 81 (239)
.+.+|++...+|.+|.+.|+++|+++|++||++++||.+|+.+....+ .. + ++|+++.++||++++|. . .|
T Consensus 152 ~~~~v~~e~~~np~G~~~~l~~i~~la~~~g~~livDe~~~~~~~~~~-----~~-~-g~div~~S~sK~l~g~g~~~gG 224 (400)
T 3nmy_A 152 DTKMVWIETPTNPMLKLVDIAAIAVIARKHGLLTVVDNTFASPMLQRP-----LS-L-GADLVVHSATKYLNGHSDMVGG 224 (400)
T ss_dssp TEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTHHHHCCG-----GG-G-TCSEEEEETTTTTTCSSSCCCE
T ss_pred CCCEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCcccccCCh-----hh-c-CCcEEEecCccccCCCCCccee
Confidence 356788888999999999999999999999999999999986544222 11 1 49999999999999873 2 34
Q ss_pred -EEEeeCcccccccccCCCCccCCCCceecCCCCCChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEc
Q 048438 82 -CLWATNPEYLKNKATESKPVVDYKDWQITLSRSFRSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSGDKRFEVVF 160 (239)
Q Consensus 82 -~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~~~~ 160 (239)
++++.++++...... +....+.....+..|.+++. .+.+..++++..++++++.+.|++.|.++-+.
T Consensus 225 ~~vv~~~~~~~~~l~~----------~~~~~g~~~~~~~a~~~l~~--l~~l~~r~~~~~~~a~~l~~~L~~~p~v~~V~ 292 (400)
T 3nmy_A 225 IAVVGDNAELAEQMAF----------LQNSIGGVQGPFDSFLALRG--LKTLPLRMRAHCENALALAQWLETHPAIEKVI 292 (400)
T ss_dssp EEEECSCHHHHHHHHH----------HHHHHCCBCCHHHHHHHHHH--HTTHHHHHHHHHHHHHHHHHHHTTCTTEEEEE
T ss_pred EEEEeCCHHHHHHHHH----------HHHhcCCCCCHHHHHHHHHh--HhHHHHHHHHHHHHHHHHHHHHHcCCCEeEEE
Confidence 444444433322210 00011222344556666554 34567788888999999999999988887553
Q ss_pred CC-----------------CeeEEEEEEcC
Q 048438 161 PC-----------------HFAVVCFRVSP 173 (239)
Q Consensus 161 ~~-----------------~~~iv~f~~~~ 173 (239)
.| ..++++|.+++
T Consensus 293 ~p~l~~~~~~~~~~~~~~g~G~~~~~~l~~ 322 (400)
T 3nmy_A 293 YPGLASHPQHVLAKRQMSGFGGIVSIVLKG 322 (400)
T ss_dssp CTTSTTSTTHHHHHHHCSSCCSEEEEEETT
T ss_pred CCCCCCCcCHHHHHHhCCCCCceEEEEeCC
Confidence 22 13699999975
No 106
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=99.38 E-value=3.5e-13 Score=116.01 Aligned_cols=195 Identities=9% Similarity=0.029 Sum_probs=116.1
Q ss_pred cEEEEEecCCCCcccccC---hhHHHHHHHHhCCEEEEecccccccccCcccccc--cC-CCCCcceEEEcCcccCCCc-
Q 048438 5 PLFLCATIGTTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHF--ID-GVEGADSFSLNAHKWFFAT- 77 (239)
Q Consensus 5 p~~vv~t~gtt~~G~i~p---l~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~--~~-~~~~~Ds~~~~~hK~l~~P- 77 (239)
+.+|+++..+|.+|.+.| +++|+++|++||+++++|.+|+.+.......... +. .....+.++.++||+++.|
T Consensus 180 ~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G 259 (407)
T 3nra_A 180 ARVFLFSNPNNPAGVVYSAEEIGQIAALAARYGATVIADQLYSRLRYAGASYTHLRAEAAVDAENVVTIMGPSKTESLSG 259 (407)
T ss_dssp CCEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCTTCCCCCGGGCTTSCGGGEEEEECSSSTTCCGG
T ss_pred CcEEEEcCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCChhhcCcccCCcEEEEeCcccccCCCe
Confidence 456677888999999999 9999999999999999999998754321111110 11 1123668899999998733
Q ss_pred ccceEEEeeCcccccccccCCCCccCCCCceecCCCCCChHHHHHHHHHh--CHHHHHHHHHHHHHHHHHHHHHHhCCCC
Q 048438 78 LDCCCLWATNPEYLKNKATESKPVVDYKDWQITLSRSFRSLKLWFVIRNY--GMENLRHFLRSHVNMARLFERLVSGDKR 155 (239)
Q Consensus 78 ~g~g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~~~g 155 (239)
..+|+++. +++.+....... ..+. . ....+....+...+ +.+.++++.++..++.+++.+.|+++++
T Consensus 260 ~r~G~~~~-~~~~~~~l~~~~------~~~~--~--~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 328 (407)
T 3nra_A 260 YRLGVAFG-SRAIIARMEKLQ------AIVS--L--RAAGYSQAVLRGWFDEAPGWMEDRIARHQAIRDELLHVLRGCEG 328 (407)
T ss_dssp GCCEEEEE-CHHHHHHHHHHH------HHHT--S--SSCHHHHGGGGGTTCCCTTHHHHHHHHHHHHHHHHHHHHHTSTT
T ss_pred eeEEEEEc-CHHHHHHHHHHH------hhhc--c--CCChHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 45677765 333332211000 0000 0 00112222222222 2245677778888999999999999889
Q ss_pred eEEEcCCCeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhc-CcEEEEEEEE--CCEeEEEEEecC
Q 048438 156 FEVVFPCHFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINAS-GKAYMTNVVL--GGIYAIRFATGA 232 (239)
Q Consensus 156 ~~~~~~~~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~--~g~~~lR~~~~~ 232 (239)
++++.+...+.+.+.++.... + ...+.+.|.++ |....+.... .+..++|+++..
T Consensus 329 ~~~~~~~~~~~~~~~~~~~~~---------------~-------~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~ 386 (407)
T 3nra_A 329 VFARTPQAGSYLFPRLPKLAV---------------A-------PAEFVKILRLQAGVVVTPGTEFSPHTADSVRLNFSQ 386 (407)
T ss_dssp CBCCCCSBSSEECCBCCCBSS---------------C-------HHHHHHHHHHHHCEECEEGGGTCTTCTTBEEEECCS
T ss_pred ceeccCCeeEEEEEeCCCCCC---------------C-------HHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEeCC
Confidence 887655544566555543211 0 12455666554 5544432222 246789999875
No 107
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=99.38 E-value=6.9e-12 Score=109.89 Aligned_cols=155 Identities=14% Similarity=0.040 Sum_probs=97.1
Q ss_pred cEEEEEecCCCCcccccChhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCcccceEEE
Q 048438 5 PLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLW 84 (239)
Q Consensus 5 p~~vv~t~gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~ 84 (239)
|-+|+++..++.++ .|+++|.++|++||+++|+|++|+.+......... -++.+|+++.++||++++|.| |+++
T Consensus 186 ~~~i~~~~~~~~~~--~~l~~i~~l~~~~g~lli~Dea~~~g~~~~g~~~~---~~~~~di~~~s~sK~l~G~~g-G~i~ 259 (447)
T 3h7f_A 186 PKVIIAGWSAYPRV--LDFAAFRSIADEVGAKLLVDMAHFAGLVAAGLHPS---PVPHADVVSTTVHKTLGGGRS-GLIV 259 (447)
T ss_dssp CSEEEEECSSCCSC--CCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCC---STTTCSEEEEESSGGGCCCSC-EEEE
T ss_pred CeEEEEcCCCCCCc--cCHHHHHHHHHHcCCEEEEECCchhhhhcCCCCCC---CCCCCcEEEecCCcCCCCCCe-EEEE
Confidence 44555544444444 39999999999999999999998766443221111 113489999999999988987 7776
Q ss_pred eeCcccccccccCCCCccCCCCceecCCCCC--ChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCC----CCeEE
Q 048438 85 ATNPEYLKNKATESKPVVDYKDWQITLSRSF--RSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSGD----KRFEV 158 (239)
Q Consensus 85 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~----~g~~~ 158 (239)
.+ +++........ ..+. .+... ...++..++..+..+.++++.++..++++++.+.|++. +|+++
T Consensus 260 ~~-~~~~~~l~~~~------~~~~--~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~g~~~ 330 (447)
T 3h7f_A 260 GK-QQYAKAINSAV------FPGQ--QGGPLMHVIAGKAVALKIAATPEFADRQRRTLSGARIIADRLMAPDVAKAGVSV 330 (447)
T ss_dssp EC-GGGHHHHHHHH------TTTT--CSSCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHTSHHHHHTTCEE
T ss_pred EC-HHHHHHHhhhc------CCcc--cCCccHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHhccccCCCeEE
Confidence 64 33322211000 0000 11111 12333444554444567788888889999999999875 58888
Q ss_pred EcC-CCeeEEEEEEcCC
Q 048438 159 VFP-CHFAVVCFRVSPL 174 (239)
Q Consensus 159 ~~~-~~~~iv~f~~~~~ 174 (239)
+.+ ...+++.+.+.+.
T Consensus 331 ~~~~~~~~~~~~~~~~~ 347 (447)
T 3h7f_A 331 VSGGTDVHLVLVDLRDS 347 (447)
T ss_dssp GGGSCSSSEEEEECTTS
T ss_pred ecCCCCCCEEEEEcCCC
Confidence 753 3566777776543
No 108
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=99.38 E-value=4.1e-12 Score=109.65 Aligned_cols=191 Identities=9% Similarity=0.010 Sum_probs=113.9
Q ss_pred cEEEEEecCCCCcccccC---hhHHHHHHHHhCCEEEEecccccccccCcccccccCCC-CCc-ceEEEcCcccCCCccc
Q 048438 5 PLFLCATIGTTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGV-EGA-DSFSLNAHKWFFATLD 79 (239)
Q Consensus 5 p~~vv~t~gtt~~G~i~p---l~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~-~~~-Ds~~~~~hK~l~~P~g 79 (239)
+-+|+++..+|.+|.+.| +++|+++|++||+++++|++|+.+.. ...... +..+ ... |+++.++||+++ +.|
T Consensus 175 ~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~-~~~~~~-~~~~~~~~~~i~~~s~sK~~~-~~G 251 (406)
T 1xi9_A 175 TKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTY-EGEHIS-PGSLTKDVPVIVMNGLSKVYF-ATG 251 (406)
T ss_dssp EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBS-SSCCCC-HHHHCSSSCEEEEEESTTTTC-CGG
T ss_pred ceEEEEECCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEcCcccccc-CCCCCC-HHHcCCCceEEEEeccccccC-CCc
Confidence 556777788899999876 99999999999999999999987654 111100 1111 235 889999999986 445
Q ss_pred --ceEEEe-eCc----ccccccccCCCCccCCCCceecCCCC-CChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHh
Q 048438 80 --CCCLWA-TNP----EYLKNKATESKPVVDYKDWQITLSRS-FRSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVS 151 (239)
Q Consensus 80 --~g~l~~-~~~----~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~ 151 (239)
+|++++ .++ +.+...... .... .+.. +....+..+++. +.+.+++..++..++.+++.+.|+
T Consensus 252 ~r~G~~~~~~~~~~~~~l~~~l~~~-------~~~~--~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~ 321 (406)
T 1xi9_A 252 WRLGYMYFVDPENKLSEVREAIDRL-------ARIR--LCPNTPAQFAAIAGLTG-PMDYLKEYMKKLKERRDYIYKRLN 321 (406)
T ss_dssp GCCEEEEEECTTCTTHHHHHHHHHH-------HHHT--CCSCSHHHHHHHHHHHS-CCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cEEEEEEEecCchhHHHHHHHHHHH-------HHhh--cCCCHHHHHHHHHHHhC-CcHHHHHHHHHHHHHHHHHHHHHH
Confidence 788873 233 333222110 0000 1111 111222233432 344567777888899999999999
Q ss_pred CCCCeEEEcCCCeeEEE-EEEcCC-CcchhhhhhhhcccccccHHHHHHHHHHHHHHHH-hcCcEEEEEEEE--CCEeEE
Q 048438 152 GDKRFEVVFPCHFAVVC-FRVSPL-PVLMDKLKTKYENCLLSEEEQINEFNRELLESIN-ASGKAYMTNVVL--GGIYAI 226 (239)
Q Consensus 152 ~~~g~~~~~~~~~~iv~-f~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~--~g~~~l 226 (239)
+++++++.. +..+++. +.++.. +. + ...+.+.|. +.|..+...... .+..++
T Consensus 322 ~~~~~~~~~-~~~~~~~~~~~~~~~~~---------------~-------~~~l~~~l~~~~gi~v~~g~~f~~~~~~~l 378 (406)
T 1xi9_A 322 EIPGISTTK-PQGAFYIFPKIEVGPWK---------------N-------DKEFVLDVLHNAHVLFVHGSGFGEYGAGHF 378 (406)
T ss_dssp TSTTEECCC-CCBSSEECCEECSCSCS---------------S-------HHHHHHHHHHHHCEECEEGGGGCGGGTTBE
T ss_pred hCCCCeeec-CCeeEEEEEecCccCCC---------------C-------HHHHHHHHHHhCCEEEeCchhcCCCCCCEE
Confidence 988988764 4444443 355431 10 0 125566665 556554433222 125689
Q ss_pred EEEec
Q 048438 227 RFATG 231 (239)
Q Consensus 227 R~~~~ 231 (239)
|+++.
T Consensus 379 Ris~~ 383 (406)
T 1xi9_A 379 RAVFL 383 (406)
T ss_dssp EEECC
T ss_pred EEEec
Confidence 99986
No 109
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=99.37 E-value=4.4e-12 Score=110.36 Aligned_cols=200 Identities=11% Similarity=-0.008 Sum_probs=120.0
Q ss_pred cEEEEEecCCCCcccccC---hhHHHHHHHHhCCEEEEecccccccccCcccccccCCCC-Ccc-eEEEcCcccCCCc-c
Q 048438 5 PLFLCATIGTTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVE-GAD-SFSLNAHKWFFAT-L 78 (239)
Q Consensus 5 p~~vv~t~gtt~~G~i~p---l~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~-~~D-s~~~~~hK~l~~P-~ 78 (239)
+.+|+++..+|.+|.+.| +++|+++|+++|+++++|.+|+........... ...+. ..+ +++.++||.++.| .
T Consensus 192 ~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~i~Deay~~~~~~g~~~~~-~~~~~~~~~vi~~~S~sK~~~~~G~ 270 (427)
T 3dyd_A 192 TACLIVNNPSNPCGSVFSKRHLQKILAVAARQCVPILADEIYGDMVFSDCKYEP-LATLSTDVPILSCGGLAKRWLVPGW 270 (427)
T ss_dssp EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTTTCBCSSCCCCC-GGGGCSSCCEEEEEESTTTSSCGGG
T ss_pred CCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcCchhhccCCCcCcc-HHHhCCCCcEEEEeeccccCCCcCc
Confidence 556778888999999999 999999999999999999999875432211111 11111 122 4567999985544 3
Q ss_pred cceEEEeeCc------ccccccccCCCCccCCCCceecCCCCCChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhC
Q 048438 79 DCCCLWATNP------EYLKNKATESKPVVDYKDWQITLSRSFRSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSG 152 (239)
Q Consensus 79 g~g~l~~~~~------~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~ 152 (239)
.+|++++.++ ......... .. .......+....+..+++....+.++++.++..++++++.+.|++
T Consensus 271 riG~~~~~~~~~~~~~~i~~~l~~~-------~~-~~~~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 342 (427)
T 3dyd_A 271 RLGWILIHDRRDIFGNEIRDGLVKL-------SQ-RILGPCTIVQGALKSILCRTPGEFYHNTLSFLKSNADLCYGALAA 342 (427)
T ss_dssp CCEEEEEECSTTSSHHHHHHHHHHH-------HH-HHCCSCHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEecCcchhhHHHHHHHHHHH-------Hh-ccCCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 3788887643 111111000 00 000001112233334455445667788888889999999999999
Q ss_pred CCCeEEEcCCCeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHH-hcCcEEEEEEEECCEeEEEEEec
Q 048438 153 DKRFEVVFPCHFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESIN-ASGKAYMTNVVLGGIYAIRFATG 231 (239)
Q Consensus 153 ~~g~~~~~~~~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~g~~~lR~~~~ 231 (239)
+||++++.+...+.+.+.++..... +. .+ ...+.++|. +.|.++.+........++|+++.
T Consensus 343 ~~g~~~~~p~~g~~~~~~l~~~~~~----------~~-~~-------~~~~~~~l~~~~gV~v~~g~~~~~~~~iRis~~ 404 (427)
T 3dyd_A 343 IPGLRPVRPSGAMYLMVGIEMEHFP----------EF-EN-------DVEFTERLVAEQSVHCLPATCFEYPNFIRVVIT 404 (427)
T ss_dssp STTEEEECCSBTTEEEEEECGGGCT----------TC-SS-------HHHHHHHHHHHHCEECEEGGGGTCTTEEEEESC
T ss_pred CCCceecCCCeeEEEEEecCHhhcC----------CC-CC-------HHHHHHHHHHHCCEEEECCcccCCCCeEEEEEC
Confidence 8999987666666666677521100 00 00 124555664 45655554333444578999975
No 110
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=99.37 E-value=1.7e-12 Score=111.81 Aligned_cols=197 Identities=13% Similarity=0.083 Sum_probs=114.0
Q ss_pred ccEEE-EEecCCCCcccccChh---HHHHHHHHhCCEEEEecccccccccCcccccccCCC--CCcceEEEcCcccCCCc
Q 048438 4 IPLFL-CATIGTTAITAVDPLK---PLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGV--EGADSFSLNAHKWFFAT 77 (239)
Q Consensus 4 ~p~~v-v~t~gtt~~G~i~pl~---~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~--~~~Ds~~~~~hK~l~~P 77 (239)
.+-+| +....+|.+|.+.|++ +|+++|++||+++++|++|+.+......... +..+ ...+.++.+++|+++ |
T Consensus 174 ~~~~v~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~-~~~~~~~~~~i~~~s~sK~~~-~ 251 (407)
T 2zc0_A 174 KVKLIYTIPTGQNPMGVTMSMERRKALLEIASKYDLLIIEDTAYNFMRYEGGDIVP-LKALDNEGRVIVAGTLSKVLG-T 251 (407)
T ss_dssp CEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBSSCSSCCC-GGGGCSSCCEEEEEESTTTTC-T
T ss_pred CceEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECCCcccccCCCCCCC-hhhcCCCCCEEEEcccccccC-C
Confidence 34454 4567789999999987 9999999999999999999876442211100 1111 124567889999988 5
Q ss_pred -ccceEEEeeCcccccccccCCCCccCCCCceecCCCCCChHHHHHHHHHhC-H-HHHHHHHHHHHHHHHHHHHHHhC-C
Q 048438 78 -LDCCCLWATNPEYLKNKATESKPVVDYKDWQITLSRSFRSLKLWFVIRNYG-M-ENLRHFLRSHVNMARLFERLVSG-D 153 (239)
Q Consensus 78 -~g~g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g-~-~g~~~~~~~~~~la~~l~~~l~~-~ 153 (239)
..+|+++++ ++......... ..+.... .......+..+++... . +.+++..++..++.+++.+.|++ .
T Consensus 252 G~r~G~~~~~-~~~~~~~~~~~------~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 323 (407)
T 2zc0_A 252 GFRIGWIIAE-GEILKKVLMQK------QPIDFCA-PAISQYIALEYLKRGYFEKYHLEGALLGYKEKRDIMLKALENHL 323 (407)
T ss_dssp TSCCEEEECC-HHHHHHHHHHH------TTTTSSS-CHHHHHHHHHHHHTTHHHHHTTTTHHHHHHHHHHHHHHHHHHHC
T ss_pred CcceEEEecC-HHHHHHHHHHH------HhhcCCC-CHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 247888874 44333221100 0001000 0011112222333211 1 33455666677888899999976 5
Q ss_pred CCeEEEcCCCeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhc-CcEEEEEEEE----CCEeEEEE
Q 048438 154 KRFEVVFPCHFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINAS-GKAYMTNVVL----GGIYAIRF 228 (239)
Q Consensus 154 ~g~~~~~~~~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~----~g~~~lR~ 228 (239)
++++++.+...+++.+.++... + ...+.+.|.++ |..+...... .+..++|+
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~----------------~-------~~~l~~~l~~~~gi~v~~g~~~~~~~~~~~~iRi 380 (407)
T 2zc0_A 324 PNAEFTKPIAGMFVMFFLPEGA----------------D-------GISFANELMEREGVVVVPGKPFYTDESGKNAIRL 380 (407)
T ss_dssp TTSCBCCCSBSSEEEEECSTTC----------------C-------HHHHHHHHHHHTCEECBCSGGGCSSSCCTTEEEE
T ss_pred CCCEEecCCCcEEEEEEcCCCC----------------C-------HHHHHHHHHHhCCeEEECchhccCCCCCCCeEEE
Confidence 7777665555567778875311 0 12566677777 5544332211 13468999
Q ss_pred EecCC
Q 048438 229 ATGAT 233 (239)
Q Consensus 229 ~~~~~ 233 (239)
++..+
T Consensus 381 s~~~~ 385 (407)
T 2zc0_A 381 NFSRP 385 (407)
T ss_dssp ECSSS
T ss_pred EeCCC
Confidence 98876
No 111
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.37 E-value=1.8e-11 Score=104.95 Aligned_cols=190 Identities=14% Similarity=0.045 Sum_probs=112.2
Q ss_pred ccEEEEEecCCCCcccccC----hhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCc-c
Q 048438 4 IPLFLCATIGTTAITAVDP----LKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFAT-L 78 (239)
Q Consensus 4 ~p~~vv~t~gtt~~G~i~p----l~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P-~ 78 (239)
.+.+|+++..++.+|.+.| +++|.++|++||+++|+|.+|++.............++ ..|.++++ |++.+. .
T Consensus 182 ~~~~v~~~~~~nptG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~-~~d~~~~S--K~l~gG~~ 258 (392)
T 3ruy_A 182 NTAAFILEPIQGEAGINIPPAGFLKEALEVCKKENVLFVADEIQTGLGRTGKVFACDWDNV-TPDMYILG--KALGGGVF 258 (392)
T ss_dssp TEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHTTTCEEEEECTTTTTTTTSSSSGGGGGTC-CCSEEEEC--GGGGTTTS
T ss_pred CeEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCccccchhhhccCC-CCCEEEEc--hhhhCChh
Confidence 3567888888999999999 99999999999999999999963211111111112233 37888775 987652 3
Q ss_pred cceEEEeeCcccccccccCCCCccCCCCceecCCCCCChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCC--CCe
Q 048438 79 DCCCLWATNPEYLKNKATESKPVVDYKDWQITLSRSFRSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSGD--KRF 156 (239)
Q Consensus 79 g~g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~--~g~ 156 (239)
..|+++.+ ++......... ....+ ............+++.+.. ++..++..++++++.+.|+++ +.+
T Consensus 259 ~~G~~~~~-~~~~~~~~~~~----~~~~~---~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~ 327 (392)
T 3ruy_A 259 PISCAAAN-RDILGVFEPGS----HGSTF---GGNPLACAVSIAALEVLEE---EKLTERSLQLGEKLVGQLKEIDNPMI 327 (392)
T ss_dssp CCEEEEEC-HHHHTTCCTTS----SCCSS---TTCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHTTCCCTTE
T ss_pred hhEEEEEC-HHHHhhhccCC----cCCCC---CCCHHHHHHHHHHHHHHHh---hhHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 47777764 34433221100 00001 0011112222333443322 556677789999999999886 234
Q ss_pred EEEcCCCeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhcCcEEEEEEEECCEeEEEEEecCCCCC
Q 048438 157 EVVFPCHFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINASGKAYMTNVVLGGIYAIRFATGATLTE 236 (239)
Q Consensus 157 ~~~~~~~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~ 236 (239)
... ++..+++.+.+++.. . .+.+.|.++|....+ .+..++|++++...|.
T Consensus 328 ~~~-~~~g~~~~~~~~~~~---------------------~----~l~~~l~~~gi~v~~----~~~~~iRi~~~~~~~~ 377 (392)
T 3ruy_A 328 TEV-RGKGLFIGIELNEPA---------------------R----PYCEQLKAAGLLCKE----THENVIRIAPPLVISE 377 (392)
T ss_dssp EEE-EEETTEEEEEESSCS---------------------H----HHHHHHHTTTEECCC----BTTTEEEECCCTTCCH
T ss_pred eEE-EeeeeEEEEEEcchH---------------------H----HHHHHHHHCCcEEec----CCCCEEEEECCCCCCH
Confidence 433 334667778775411 1 566677766654332 2357899997665554
Q ss_pred c
Q 048438 237 E 237 (239)
Q Consensus 237 ~ 237 (239)
+
T Consensus 378 ~ 378 (392)
T 3ruy_A 378 E 378 (392)
T ss_dssp H
T ss_pred H
Confidence 4
No 112
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=99.37 E-value=1.8e-12 Score=110.87 Aligned_cols=197 Identities=14% Similarity=0.086 Sum_probs=116.4
Q ss_pred cEEEEEecCCCCcccc---cChhHHHHHHHHhCCEEEEecccccccccCcccccccCCCC----CcceEEEcCcccCCCc
Q 048438 5 PLFLCATIGTTAITAV---DPLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVE----GADSFSLNAHKWFFAT 77 (239)
Q Consensus 5 p~~vv~t~gtt~~G~i---~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~----~~Ds~~~~~hK~l~~P 77 (239)
+.+|+++..+|.+|.+ +++++|+++|++||+++++|++|+.+......... +..+. ...+++.++||+++.|
T Consensus 165 ~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~-~~~~~~~~~~~~i~~~s~sK~~g~~ 243 (391)
T 4dq6_A 165 VKLFILCNPHNPVGRVWTKDELKKLGDICLKHNVKIISDEIHSDIILKKHKHIP-MASISKEFEKNTITCMAPTKTFNIA 243 (391)
T ss_dssp EEEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCC-GGGSCHHHHHTEEEEECSHHHHTCG
T ss_pred CCEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEeeccccccccCCCCccC-HHHcCccccCcEEEEEechhhccCc
Confidence 5577788889999999 77899999999999999999999875432111110 11111 1337889999998633
Q ss_pred -ccceEEEeeCcccccccccCCCCccCCCCceecCCCCCChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhC-CCC
Q 048438 78 -LDCCCLWATNPEYLKNKATESKPVVDYKDWQITLSRSFRSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSG-DKR 155 (239)
Q Consensus 78 -~g~g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~-~~g 155 (239)
..+|+++..++......... . ..+...............+++. ..+.++++.++..++.+++.+.|++ +|+
T Consensus 244 G~r~G~~~~~~~~~~~~~~~~----~--~~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 316 (391)
T 4dq6_A 244 GLQSSYVVLPDEKDYKLLDDA----F--TRIDIKRNNCFSLVATEASYNN-GESWLESFLEYLESNIDFAIKYINENMPK 316 (391)
T ss_dssp GGCCEEEECCSHHHHHHHHHH----H--HHTTCCCCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred ccceEEEEeCCHHHHHHHHHH----H--HhhcCCCCCHHHHHHHHHHHhc-hHHHHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 45777776553333222100 0 0000000001111222333433 3445677788888999999999987 789
Q ss_pred eEEEcCCCeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhc-CcEEEEEEEE--CCEeEEEEEec
Q 048438 156 FEVVFPCHFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINAS-GKAYMTNVVL--GGIYAIRFATG 231 (239)
Q Consensus 156 ~~~~~~~~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~--~g~~~lR~~~~ 231 (239)
++++.+....++.+.++..+. + ...+.+.|.++ |....+.... .+..++|++++
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~---------------~-------~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~ 373 (391)
T 4dq6_A 317 LKVRKPEGTYLLWVDFSALGL---------------S-------DEELESILVQKGKVALNQGNSFGIGGSGYQRINLA 373 (391)
T ss_dssp SEECCCSBSSEEEEECGGGCC---------------C-------HHHHHHHHHHTTCEECEEGGGGCTTCTTEEEEECC
T ss_pred CEecCCCccEEEEEEhhhcCC---------------C-------HHHHHHHHHHhCCEEeeCchhhCCCCCCeEEEEEc
Confidence 988754333333466653111 0 12566777777 5544332222 23578999987
No 113
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=99.36 E-value=2.2e-12 Score=109.60 Aligned_cols=184 Identities=12% Similarity=0.059 Sum_probs=114.2
Q ss_pred cEEEEEecCCCCccccc---ChhHHHHHHHHh--CCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCccc
Q 048438 5 PLFLCATIGTTAITAVD---PLKPLCDVAKQF--GIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATLD 79 (239)
Q Consensus 5 p~~vv~t~gtt~~G~i~---pl~~i~~i~~~~--gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g 79 (239)
+-+|+++..+|.+|.+. ++++|+++|++| |+++++|++|+.... ......... ...+.++.++||++.....
T Consensus 158 ~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~~~li~De~~~~~~~--~~~~~~~~~-~~~~i~~~s~sK~~~~G~r 234 (367)
T 3euc_A 158 PAIVYLAYPNNPTGNLFDAADMEAIVRAAQGSVCRSLVVVDEAYQPFAQ--ESWMSRLTD-FGNLLVMRTVSKLGLAGIR 234 (367)
T ss_dssp CSEEEEESSCTTTCCCCCHHHHHHHHHHTBTTSCBCEEEEECTTCCSSS--CCSGGGGGT-CTTEEEEEECCCTTSCSCC
T ss_pred CCEEEEcCCCCCCCCCCCHHHHHHHHHhhhhcCCCcEEEEeCcchhhcc--cchHHHHhh-CCCEEEEecchhhcccccC
Confidence 45667778899999985 577888889999 999999999985321 111111222 2366888999999443345
Q ss_pred ceEEEeeCcccccccccCCCCccCCCCceecCCCCCChHHHHHHHHHhC-HHHHHHHHHHHHHHHHHHHHHHhCCCCeEE
Q 048438 80 CCCLWATNPEYLKNKATESKPVVDYKDWQITLSRSFRSLKLWFVIRNYG-MENLRHFLRSHVNMARLFERLVSGDKRFEV 158 (239)
Q Consensus 80 ~g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g-~~g~~~~~~~~~~la~~l~~~l~~~~g~~~ 158 (239)
+|+++. +++.+....... ..+. ...+....+...+. .+.++++.++..++.+++.+.|+++||+++
T Consensus 235 ~G~~~~-~~~~~~~~~~~~------~~~~------~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~ 301 (367)
T 3euc_A 235 LGYVAG-DPQWLEQLDKVR------PPYN------VNVLTEATALFALEHVAVLDEQAAQLRAERSRVAEGMAAHGGVTV 301 (367)
T ss_dssp EEEEEE-CHHHHHHHGGGC------CSSC------CCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHTSTTCEE
T ss_pred ceeeee-CHHHHHHHHHhC------CCCC------CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCcEE
Confidence 677776 334333221100 0011 12233333322222 445678888889999999999999889985
Q ss_pred EcCCCeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhcCcEEEEEEEE--CCEeEEEEEec
Q 048438 159 VFPCHFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINASGKAYMTNVVL--GGIYAIRFATG 231 (239)
Q Consensus 159 ~~~~~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~--~g~~~lR~~~~ 231 (239)
.++..+.+.+.++ . ...+.+.|.++|..+...... .+..++|+++.
T Consensus 302 -~~~~~~~~~~~~~--~------------------------~~~l~~~l~~~gi~v~~~~~~~~~~~~~iRis~~ 349 (367)
T 3euc_A 302 -FPSAANFLLARVP--D------------------------AAQTFDRLLARKVLIKNVSKMHPLLANCLRVTVS 349 (367)
T ss_dssp -CCCSSSEEEEECS--C------------------------HHHHHHHHHTTTEECEECGGGCGGGTTEEEEECC
T ss_pred -CCCCCeEEEEECC--C------------------------HHHHHHHHHHCCeEEEECCccCCCCCCEEEEecC
Confidence 4666677777765 1 115666777676654432221 13468999976
No 114
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=99.36 E-value=2.2e-12 Score=111.96 Aligned_cols=200 Identities=13% Similarity=0.075 Sum_probs=119.0
Q ss_pred ccEEEEEecCCCCcccc---cChhHHHHHHHHhCCEEEEecccccccccCcccccc--c-CCCCCcceEEEcCcccCC-C
Q 048438 4 IPLFLCATIGTTAITAV---DPLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHF--I-DGVEGADSFSLNAHKWFF-A 76 (239)
Q Consensus 4 ~p~~vv~t~gtt~~G~i---~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~--~-~~~~~~Ds~~~~~hK~l~-~ 76 (239)
.+.+|++....+.+|.+ +++++|+++|++||+++++|++|+............ + .+....+.++.+++|+++ .
T Consensus 194 ~~~~vil~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~ 273 (421)
T 3l8a_A 194 NVKIYLLCSPHNPGGRVWDNDDLIKIAELCKKHGVILVSDEIHQDLALFGNTHHSLNTLDASYKDFTIILSSATKTFNIA 273 (421)
T ss_dssp TEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCTTGGGTEEEEECSHHHHTCG
T ss_pred CCeEEEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCccHHHcCchhcCcEEEEEeChhhccCc
Confidence 35677778889999998 789999999999999999999998654322111110 1 111135588899999986 3
Q ss_pred cccceEEEeeCcccccccccCCCCccCCCCceecCCCCCChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCCCCe
Q 048438 77 TLDCCCLWATNPEYLKNKATESKPVVDYKDWQITLSRSFRSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSGDKRF 156 (239)
Q Consensus 77 P~g~g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~ 156 (239)
...+|++++++++......... ..+....+..+.......+++. +.+.+++..++..++.+++.+.|++.+++
T Consensus 274 G~~~G~~~~~~~~l~~~~~~~~------~~~~~~~~n~~~~~a~~aal~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~i 346 (421)
T 3l8a_A 274 GTKNSFAIIQNESLRRKFQYRQ------LANNQHEVPTVGMIATQAAFQY-GKPWLEELKTVIEGNIKLVIKELEAKTKI 346 (421)
T ss_dssp GGCCEEEECCSHHHHHHHHHHH------HHTTCSCCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHHCSC
T ss_pred hhheEeEEcCCHHHHHHHHHHH------HhcccCCCCHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 3456888876444332221000 0001101111222333334443 45567788888889999999999887899
Q ss_pred EEEcCCCeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhcCcEEEEE-EEE--CCEeEEEEEecC
Q 048438 157 EVVFPCHFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINASGKAYMTN-VVL--GGIYAIRFATGA 232 (239)
Q Consensus 157 ~~~~~~~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~-~~~--~g~~~lR~~~~~ 232 (239)
+++.+....++.+.++..+.. ...+.+.|.++..+.+.+ ... .+..++|+++..
T Consensus 347 ~~~~~~~~~~~~v~~~~~~~~----------------------~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~ 403 (421)
T 3l8a_A 347 KVMEPEGTYLVWLDFSAYAIA----------------------QPQLSEKLQNEAKVVLNDGAHFGKEGKYFARLNVAT 403 (421)
T ss_dssp EEECCSBSSEEEEECGGGTCC----------------------TTHHHHHHHHTTCEECEEGGGGCGGGTTEEEEECCS
T ss_pred eEeCCCeeEEEEEeccccCCC----------------------HHHHHHHHHHhCCEEEECchhhCCCCCCEEEEEecC
Confidence 887554333333666531110 115566676553444433 212 245789999773
No 115
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=99.34 E-value=8.8e-12 Score=107.10 Aligned_cols=199 Identities=10% Similarity=0.003 Sum_probs=118.9
Q ss_pred ccEEEEEecCCCCcccccC---hhHHHHHHHHhCCEEEEecccccccccCcccccccCCC----CCcceEEEcCcccCCC
Q 048438 4 IPLFLCATIGTTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGV----EGADSFSLNAHKWFFA 76 (239)
Q Consensus 4 ~p~~vv~t~gtt~~G~i~p---l~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~----~~~Ds~~~~~hK~l~~ 76 (239)
.+-+|+++..+|.+|.+.| +++|+++|++||+++++|.+|+.+......... +..+ ...+.++.+++|+++.
T Consensus 164 ~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~-~~~~~~~~~~~~i~~~s~sK~~~~ 242 (399)
T 1c7n_A 164 NNKALLFCSPHNPVGRVWKKDELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTV-FQSIDEQLADKTITFTAPSKTFNI 242 (399)
T ss_dssp TEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHSSCEEEEECTTTTCBCTTCCCCC-GGGSCHHHHTTEEEEECSHHHHTC
T ss_pred CCcEEEEcCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCccc-HHHcCccccCcEEEEEeChhhccc
Confidence 3556777888999999999 999999999999999999999875432111101 1111 1256788999999864
Q ss_pred c-ccceEEEeeCcccccccccCCCCccCCCCceecCCCCCChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhC-CC
Q 048438 77 T-LDCCCLWATNPEYLKNKATESKPVVDYKDWQITLSRSFRSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSG-DK 154 (239)
Q Consensus 77 P-~g~g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~-~~ 154 (239)
| ..+|++++++++.+....... ..++...........+..+++. +.+.+++..++..++.+++.+.|++ +|
T Consensus 243 ~G~r~G~~~~~~~~~~~~l~~~~------~~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 315 (399)
T 1c7n_A 243 AGMGMSNIIIKNPDIRERFTKSR------DATSGMPFTTLGYKACEICYKE-CGKWLDGCIKVIDKNQRIVKDFFEVNHP 315 (399)
T ss_dssp GGGCCEEEECCCHHHHHHHHHHH------HHTTCCCCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred cchheEEEEECCHHHHHHHHHHH------hhcccCCCCHHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 4 236888876543433221100 0000000001111222223332 3456777778888999999999988 78
Q ss_pred CeEEEcCCCeeEE-EEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHH-hcCcEEEEEEEEC--CEeEEEEEe
Q 048438 155 RFEVVFPCHFAVV-CFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESIN-ASGKAYMTNVVLG--GIYAIRFAT 230 (239)
Q Consensus 155 g~~~~~~~~~~iv-~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~lR~~~ 230 (239)
+++++ ++..+++ .+.++..+. + ...+.+.|. +.|..+.+..... +..++|+++
T Consensus 316 ~~~~~-~~~~~~~~~~~~~~~~~---------------~-------~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~ 372 (399)
T 1c7n_A 316 EIKAP-LIEGTYLQWIDFRALKM---------------D-------HKAMEEFMIHKAQIFFDEGYIFGDGGIGFERINL 372 (399)
T ss_dssp TSBCC-CCSBSSEEEEECGGGCC---------------C-------HHHHHHHHHHTTCCCCEEGGGGCGGGTTEEEEEC
T ss_pred CCeEe-cCCceEEEEEEcccCCC---------------C-------HHHHHHHHHHhCCEEEeCccccCCCCCCeEEEEe
Confidence 88765 3445544 466653110 0 125667776 5566554432221 346899998
Q ss_pred cCC
Q 048438 231 GAT 233 (239)
Q Consensus 231 ~~~ 233 (239)
..+
T Consensus 373 ~~~ 375 (399)
T 1c7n_A 373 AAP 375 (399)
T ss_dssp CSC
T ss_pred ccC
Confidence 764
No 116
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=99.34 E-value=7.2e-12 Score=108.58 Aligned_cols=153 Identities=12% Similarity=0.119 Sum_probs=89.5
Q ss_pred CCCcccccChhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCcccceEEEeeCcccccc
Q 048438 14 TTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLWATNPEYLKN 93 (239)
Q Consensus 14 tt~~G~i~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~~l~~ 93 (239)
++.+|...|+++|.++|+++|+++|+|++|+.+... +. +. ...+..++++++++||+++. ...|+++.++++....
T Consensus 137 ~~~~G~~~~~~~i~~~~~~~~~~li~D~a~~~~~~~-~~-~~-~~~~~~~~~~s~s~~K~~~~-g~~g~~~~~~~~l~~~ 212 (418)
T 2c81_A 137 VHLFGSMANMDEINEIAQEHNLFVIEDCAQSHGSVW-NN-QR-AGTIGDIGAFSCQQGKVLTA-GEGGIIVTKNPRLFEL 212 (418)
T ss_dssp BCCTTCCCCHHHHHHHHHHTTCEEEEECTTCTTCEE-TT-EE-TTSSSSEEEEECCTTSSSCS-SSCEEEEESCHHHHHH
T ss_pred eCCcCCcccHHHHHHHHHHCCCEEEEECcccccCcc-CC-Ee-cccccceEEEeccCCcccCC-CCeEEEEECCHHHHHH
Confidence 457899999999999999999999999999987631 11 11 11122366777777999876 3556666544433221
Q ss_pred cc---cCCCCccC-----CCCce--e----c--CCCCCChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCCCCeE
Q 048438 94 KA---TESKPVVD-----YKDWQ--I----T--LSRSFRSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSGDKRFE 157 (239)
Q Consensus 94 ~~---~~~~~~~~-----~~~~~--~----~--~~~~~~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~ 157 (239)
.. ........ ...+. . . ...+...+.....+. ..+.++++.++..++++++.+.|+++++++
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~~~--~l~~~~~~~~~~~~~~~~l~~~L~~~~g~~ 290 (418)
T 2c81_A 213 IQQLRADSRVYCDDSSELMHGDMQLVKKGDIQGSNYCLSEFQSAILLD--QLQELDDKNAIREKNAMFLNDALSKIDGIK 290 (418)
T ss_dssp HHHHHBTTEEECSCGGGCCTTCBSEEECCSSCCCBCCCCHHHHHHHHH--HHTTHHHHHHHHHHHHHHHHHHHTTSTTEE
T ss_pred HHHHHHhCccccccccccccchhhccccccccCcCCCcCHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhccCCCcc
Confidence 11 00000000 00011 0 0 011122222222222 234566777888889999999999988999
Q ss_pred EEcCCCe------eEEEEEEc
Q 048438 158 VVFPCHF------AVVCFRVS 172 (239)
Q Consensus 158 ~~~~~~~------~iv~f~~~ 172 (239)
+..++.. .++++.++
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~ 311 (418)
T 2c81_A 291 VMKRPPQVSRQTYYGYVFRFD 311 (418)
T ss_dssp ECCCCTTEEECCCSEEEEEEC
T ss_pred cCCCCCCCcccccEEEEEEEc
Confidence 8754432 36667775
No 117
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=99.34 E-value=1.2e-12 Score=112.07 Aligned_cols=197 Identities=11% Similarity=0.012 Sum_probs=117.6
Q ss_pred ccEEEEEecCCCCcccccC---hhHHHHHHHHhCCEEEEecccccccccCcccccc--cCCCCCcceEEEcCcccCCCcc
Q 048438 4 IPLFLCATIGTTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHF--IDGVEGADSFSLNAHKWFFATL 78 (239)
Q Consensus 4 ~p~~vv~t~gtt~~G~i~p---l~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~--~~~~~~~Ds~~~~~hK~l~~P~ 78 (239)
.+-+|+++..+|.+|.+.| +++|+++|++||+++++|++|+............ +.+....|+++.++||+++ +.
T Consensus 163 ~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~ 241 (386)
T 1u08_A 163 RTRLVILNTPHNPSATVWQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYH-MT 241 (386)
T ss_dssp TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHHHHTTEEEEEEHHHHTT-CG
T ss_pred cCEEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEEccccccccCCCCCcChhcccCccCcEEEEecchhhcC-Cc
Confidence 3566777788899999876 6899999999999999999998643321111000 1001148999999999976 44
Q ss_pred c--ceEEEeeCcccccccccCCCCccCCCCceecCCCCCChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCCCCe
Q 048438 79 D--CCCLWATNPEYLKNKATESKPVVDYKDWQITLSRSFRSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSGDKRF 156 (239)
Q Consensus 79 g--~g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~ 156 (239)
| +|+++++ ++.+...... .....++ ........+..+++.. .+.+++..++..++.+++.+.|++. |+
T Consensus 242 G~r~G~~~~~-~~~~~~l~~~----~~~~~~~---~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~-g~ 311 (386)
T 1u08_A 242 GWKVGYCVAP-APISAEIRKV----HQYLTFS---VNTPAQLALADMLRAE-PEHYLALPDFYRQKRDILVNALNES-RL 311 (386)
T ss_dssp GGCCEEEECC-HHHHHHHHHH----HHHHTSS---CCHHHHHHHHHHHHHC-THHHHTHHHHHHHHHHHHHHHTTSS-SC
T ss_pred ccceEEEEcC-HHHHHHHHHH----HHhhccC---CChHHHHHHHHHHhCC-cHHHHHHHHHHHHHHHHHHHHHHHC-CC
Confidence 5 7888874 3333222100 0000010 0001112233344432 4556777788889999999999987 88
Q ss_pred EEEcCCCeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHH-hcCcEEEEEEEE----CCEeEEEEEec
Q 048438 157 EVVFPCHFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESIN-ASGKAYMTNVVL----GGIYAIRFATG 231 (239)
Q Consensus 157 ~~~~~~~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~----~g~~~lR~~~~ 231 (239)
++..+....++.+.++.... .+ ...+.+.|. +.|..+...... .+..++|+++.
T Consensus 312 ~~~~~~~g~~~~~~~~~~~~--------------~~-------~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~iRis~~ 370 (386)
T 1u08_A 312 EILPCEGTYFLLVDYSAVST--------------LD-------DVEFCQWLTQEHGVAAIPLSVFCADPFPHKLIRLCFA 370 (386)
T ss_dssp EECCCCBSSEEEEECTTTCC--------------SC-------HHHHHHHHHHHSCEECEEGGGGCSSCCCSCEEEEECC
T ss_pred eecCCCceEEEEEecCCCCC--------------CC-------HHHHHHHHHHhCCEEEeCchHhCCCCCCCCEEEEEEc
Confidence 87655445577787754200 00 125566665 346554433222 24578999987
Q ss_pred C
Q 048438 232 A 232 (239)
Q Consensus 232 ~ 232 (239)
+
T Consensus 371 ~ 371 (386)
T 1u08_A 371 K 371 (386)
T ss_dssp S
T ss_pred C
Confidence 4
No 118
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=99.34 E-value=6.7e-12 Score=108.50 Aligned_cols=202 Identities=12% Similarity=0.046 Sum_probs=119.8
Q ss_pred cEEEEEecCCCCcccccC---hhHHHHHHHHhCCEEEEecccccccccCc----ccccccCCCC--CcceEEEcCcccCC
Q 048438 5 PLFLCATIGTTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSACIFP----EFRHFIDGVE--GADSFSLNAHKWFF 75 (239)
Q Consensus 5 p~~vv~t~gtt~~G~i~p---l~~i~~i~~~~gi~lhvD~A~~~~~~~~~----~~~~~~~~~~--~~Ds~~~~~hK~l~ 75 (239)
+.+|+++..+|.+|.+.| +++|+++|++||+++++|++|+....... .... +..+. ..+.++.+++|+++
T Consensus 178 ~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~-~~~~~~~~~~i~~~s~sK~~~ 256 (416)
T 1bw0_A 178 TKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTS-VADFETTVPRVILGGTAKNLV 256 (416)
T ss_dssp EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCCC-TTSSCCSCCEEEEEESTTTTS
T ss_pred CeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCCCccC-HHHccCCCcEEEEecchhhCC
Confidence 456677778899999999 99999999999999999999987432111 1111 12221 12466789999976
Q ss_pred Cc-ccceEEEeeCc-ccccccccCCCCccCCCCce-ecCCCC-CChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHh
Q 048438 76 AT-LDCCCLWATNP-EYLKNKATESKPVVDYKDWQ-ITLSRS-FRSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVS 151 (239)
Q Consensus 76 ~P-~g~g~l~~~~~-~~l~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~ 151 (239)
.| ..+|++++.++ +.+...... ..... ...+.. .....+..+++....+.+++..++..++.+++.+.|+
T Consensus 257 ~~Glr~G~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~ 330 (416)
T 1bw0_A 257 VPGWRLGWLLYVDPHGNGPSFLEG------LKRVGMLVCGPCTVVQAALGEALLNTPQEHLDQIVAKIEESAMYLYNHIG 330 (416)
T ss_dssp CGGGCCEEEEEECTTCSCHHHHHH------HHHHHHHHTCSCHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCceEEEEEeeCchhhHHHHHHH------HHHHhccccCCCcHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 65 23788887654 232211100 00000 001111 1122333345544466778888889999999999999
Q ss_pred CCCCeEEEcCCCeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHH-hcCcEEEEEEEECCEeEEEEEe
Q 048438 152 GDKRFEVVFPCHFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESIN-ASGKAYMTNVVLGGIYAIRFAT 230 (239)
Q Consensus 152 ~~~g~~~~~~~~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~g~~~lR~~~ 230 (239)
+++|++++.+...+.+.+.++..... . ..+ ...+.++|. ++|..+..........++|+++
T Consensus 331 ~~~g~~~~~~~~~~~~~~~~~~~~~~----------~-~~~-------~~~~~~~l~~~~gi~v~~g~~f~~~~~iRis~ 392 (416)
T 1bw0_A 331 ECIGLAPTMPRGAMYLMSRIDLEKYR----------D-IKT-------DVEFFEKLLEEENVQVLPGTIFHAPGFTRLTT 392 (416)
T ss_dssp TSTTEEECCCCBTTEEEEEECGGGBS----------S-CCS-------HHHHHHHHHHHHCEECEEGGGGTCTTEEEEEC
T ss_pred hCCCCcccCCCeeEEEEEeCCHHHcC----------C-CCC-------HHHHHHHHHHHCCEEEecccccCCCCeEEEEe
Confidence 88899877555566677777531000 0 000 124555664 5566554433332345899998
Q ss_pred c
Q 048438 231 G 231 (239)
Q Consensus 231 ~ 231 (239)
.
T Consensus 393 ~ 393 (416)
T 1bw0_A 393 T 393 (416)
T ss_dssp C
T ss_pred c
Confidence 5
No 119
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=99.34 E-value=2.6e-11 Score=102.88 Aligned_cols=187 Identities=11% Similarity=0.061 Sum_probs=117.1
Q ss_pred ccEEEEEecCCCCcccccChhHHHHHHHHh--CCEEEEecccccccccCcccccc--cCCCCCcceEEEcCcccCCCc-c
Q 048438 4 IPLFLCATIGTTAITAVDPLKPLCDVAKQF--GIWVHVDAAYAGSACIFPEFRHF--IDGVEGADSFSLNAHKWFFAT-L 78 (239)
Q Consensus 4 ~p~~vv~t~gtt~~G~i~pl~~i~~i~~~~--gi~lhvD~A~~~~~~~~~~~~~~--~~~~~~~Ds~~~~~hK~l~~P-~ 78 (239)
.+-+|+++..+|.+|.+.|+++|.++++.+ |+++++|++|+.+.. . ..... ......-++++.+++|+++.| .
T Consensus 155 ~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~-~-~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~ 232 (363)
T 3ffh_A 155 KTTIVWICNPNNPTGNYIELADIQAFLDRVPSDVLVVLDEAYIEYVT-P-QPEKHEKLVRTYKNLIITRTFSKIYGLASA 232 (363)
T ss_dssp TEEEEEEESSCTTTCCCCCHHHHHHHHTTSCTTSEEEEECTTGGGCS-S-CCCCCGGGGGTCTTEEEEEESSSTTCCSSC
T ss_pred CCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCcEEEEeCchHhhcC-c-cccCHHHHhhcCCCEEEEeechhhhcCchh
Confidence 356777888899999999999999999888 999999999985443 1 11000 111122457788999997532 2
Q ss_pred cceEEEeeCcccccccccCCCCccCCCCceecCCCCCChHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHHHHHhCCCCeE
Q 048438 79 DCCCLWATNPEYLKNKATESKPVVDYKDWQITLSRSFRSLKLWFVIRNY-GMENLRHFLRSHVNMARLFERLVSGDKRFE 157 (239)
Q Consensus 79 g~g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~g~~~~~~~~~~la~~l~~~l~~~~g~~ 157 (239)
.+|++++ +++......... ..+. ...+..+.+...+ ..+.+++..++..++.+++.+.|++.+|++
T Consensus 233 r~G~~~~-~~~~~~~l~~~~------~~~~------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~ 299 (363)
T 3ffh_A 233 RVGYGIA-DKEIIRQLNIVR------PPFN------TTSIGQKLAIEAIKDQAFIGECRTSNANGIKQYEAFAKRFEKVK 299 (363)
T ss_dssp CCEEEEE-CHHHHHHHHHTC------CSCC------CBHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCTTCE
T ss_pred ceeeeec-CHHHHHHHHHhC------CCCC------CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhhCCCce
Confidence 3488887 444433222110 0011 1122222222222 235667788888899999999999877998
Q ss_pred EEcCCCeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhcCcEEEEEEEECCEeEEEEEec
Q 048438 158 VVFPCHFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINASGKAYMTNVVLGGIYAIRFATG 231 (239)
Q Consensus 158 ~~~~~~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~ 231 (239)
++ ++..+.+.+.++.. ...+.+.|.++|.............++|+++.
T Consensus 300 ~~-~~~~~~~~~~~~~~-------------------------~~~~~~~l~~~gi~v~~g~~~~~~~~iRis~~ 347 (363)
T 3ffh_A 300 LY-PANGNFVLIDLGIE-------------------------AGTIFSYLEKNGYITRSGAALGFPTAVRITIG 347 (363)
T ss_dssp EC-CCCSSEEEEECSSC-------------------------HHHHHHHHHHTTEECEETTTTTCTTEEEEECC
T ss_pred EC-CCCCeEEEEECCCC-------------------------HHHHHHHHHHCCeEEEeCccCCCCCeEEEECC
Confidence 76 55667777777531 12566677777655443222222468999976
No 120
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=99.33 E-value=9.7e-12 Score=106.48 Aligned_cols=193 Identities=11% Similarity=0.027 Sum_probs=114.4
Q ss_pred cEEEEEecCCCCcccccC---hhHHHHHHHHhCCEEEEecccccccccCcccccc--cCCCCCcceEEEcCcccCCCccc
Q 048438 5 PLFLCATIGTTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHF--IDGVEGADSFSLNAHKWFFATLD 79 (239)
Q Consensus 5 p~~vv~t~gtt~~G~i~p---l~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~--~~~~~~~Ds~~~~~hK~l~~P~g 79 (239)
+-+|+++..+|.+|.+.| +++|+++|++||+++++|++|+.+.......... +.+....|+++.++||+++ +.|
T Consensus 161 ~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~G 239 (389)
T 1gd9_A 161 TRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFA-MTG 239 (389)
T ss_dssp EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEESTTTTT-CGG
T ss_pred ceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCCCCHhhccCCCCCEEEEecChhhcC-Ccc
Confidence 556777888899999875 9999999999999999999998765421101111 1122247999999999975 334
Q ss_pred --ceEEEeeCcccccccccCCCCccCCCCceecCCCCCChHHHHHHHHHh--CHH--HHHHHHHHHHHHHHHHHHHHhCC
Q 048438 80 --CCCLWATNPEYLKNKATESKPVVDYKDWQITLSRSFRSLKLWFVIRNY--GME--NLRHFLRSHVNMARLFERLVSGD 153 (239)
Q Consensus 80 --~g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--g~~--g~~~~~~~~~~la~~l~~~l~~~ 153 (239)
+|+++++ ++.+....... ....++ ...+....+...+ +.+ .+++..++..++++++.+.|++.
T Consensus 240 ~r~G~~~~~-~~~~~~l~~~~----~~~~~~------~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 308 (389)
T 1gd9_A 240 WRLGFVAAP-SWIIERMVKFQ----MYNATC------PVTFIQYAAAKALKDERSWKAVEEMRKEYDRRRKLVWKRLNEM 308 (389)
T ss_dssp GCCEEEECC-HHHHHHHHHHH----TTTTCS------CCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cceEEEEEC-HHHHHHHHHHH----hhhccC------CCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHc
Confidence 6888874 33332221100 000000 1122222222222 223 56777788889999999999987
Q ss_pred CCeEEEcCCCeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHH-hcCcEEEEEEEE--CCEeEEEEEe
Q 048438 154 KRFEVVFPCHFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESIN-ASGKAYMTNVVL--GGIYAIRFAT 230 (239)
Q Consensus 154 ~g~~~~~~~~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~--~g~~~lR~~~ 230 (239)
|+++..+.....+.+.++..+. + ...+.+.|. +.|..+...... .+..++|+++
T Consensus 309 -g~~~~~~~~~~~~~~~~~~~~~---------------~-------~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~ 365 (389)
T 1gd9_A 309 -GLPTVKPKGAFYIFPRIRDTGL---------------T-------SKKFSELMLKEARVAVVPGSAFGKAGEGYVRISY 365 (389)
T ss_dssp -TCCCCCCCBTTEECCBCGGGTC---------------C-------HHHHHHHHHHHTCEECEEGGGGCGGGTTBEEEEC
T ss_pred -CCeecCCCeeeEEEEeccCCCC---------------C-------HHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEe
Confidence 8876643322345555542110 0 125666776 556554433222 1356899998
Q ss_pred cC
Q 048438 231 GA 232 (239)
Q Consensus 231 ~~ 232 (239)
..
T Consensus 366 ~~ 367 (389)
T 1gd9_A 366 AT 367 (389)
T ss_dssp CS
T ss_pred cC
Confidence 75
No 121
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=99.33 E-value=2.9e-12 Score=109.07 Aligned_cols=186 Identities=14% Similarity=0.088 Sum_probs=112.7
Q ss_pred cEEEEEecCCCCcccccChhHHHHHHHHhCCEEEEecccccccccCcccccc--cCCCCCcceEEEcCcccCCCccc--c
Q 048438 5 PLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHF--IDGVEGADSFSLNAHKWFFATLD--C 80 (239)
Q Consensus 5 p~~vv~t~gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~--~~~~~~~Ds~~~~~hK~l~~P~g--~ 80 (239)
+-+|+++..+|.+|.+.|++ |.++|++||+++++|.+|+.+..... .... +.+....|+++.++||+++ +.| +
T Consensus 155 ~~~v~~~~p~nptG~~~~~~-l~~~~~~~~~~li~De~~~~~~~~g~-~~~~~~~~~~~~~~i~~~s~sK~~~-~~G~r~ 231 (370)
T 2z61_A 155 TKAIIINSPSNPLGEVIDRE-IYEFAYENIPYIISDEIYNGLVYEGK-CYSAIEFDENLEKTILINGFSKLYA-MTGWRI 231 (370)
T ss_dssp EEEEEEESSCTTTCCCCCHH-HHHHHHHHCSEEEEECTTTTCBSSSC-CCCGGGTCTTCSSEEEEEESTTTTT-CGGGCC
T ss_pred ceEEEEcCCCCCcCcccCHH-HHHHHHHcCCEEEEEcchhhcccCCC-CcCHHHccCCCCcEEEEecChhccC-CccceE
Confidence 45677788889999999999 99999999999999999987654211 1111 1112348999999999975 445 7
Q ss_pred eEEEeeCcccccccccCCCCccCCCCceecCCCCCChHHHHHHHHHh---CHHHHHHHHHHHHHHHHHHHHHHhCCCCeE
Q 048438 81 CCLWATNPEYLKNKATESKPVVDYKDWQITLSRSFRSLKLWFVIRNY---GMENLRHFLRSHVNMARLFERLVSGDKRFE 157 (239)
Q Consensus 81 g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---g~~g~~~~~~~~~~la~~l~~~l~~~~g~~ 157 (239)
|+++.++ +........ ..........+..+.+...+ +.+.+++..++..++.+++.+.|++. |++
T Consensus 232 G~~~~~~-~~~~~~~~~----------~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~ 299 (370)
T 2z61_A 232 GYVISND-EIIEAILKL----------QQNLFISAPTISQYAALKAFEKETEREINSMIKEFDRRRRLVLKYVKDF-GWE 299 (370)
T ss_dssp EEEECCH-HHHHHHHHH----------HHHHTSSSCHHHHHHHGGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCB
T ss_pred EEEEECH-HHHHHHHHH----------HhhcccCCCHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHc-CCe
Confidence 8877643 333222100 00000011123333333333 34456777778889999999999887 877
Q ss_pred EEcCCCee-EEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHH-hcCcEEEEEEEEC--CEeEEEEEec
Q 048438 158 VVFPCHFA-VVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESIN-ASGKAYMTNVVLG--GIYAIRFATG 231 (239)
Q Consensus 158 ~~~~~~~~-iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~lR~~~~ 231 (239)
+..+ +.+ .+.+.++. . ...+.+.|. ++|.......... +..++|+++.
T Consensus 300 ~~~~-~~~~~~~~~~~~-~------------------------~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~Ri~~~ 351 (370)
T 2z61_A 300 VNNP-IGAYYVFPNIGE-D------------------------GREFAYKLLKEKFVALTPGIGFGSKGKNYIRISYA 351 (370)
T ss_dssp CCCC-CBTTEECCBCSS-C------------------------HHHHHHHHHHHHCEECEEGGGGCGGGSSBEEEECC
T ss_pred ecCC-CcceEEEEecCC-C------------------------HHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEe
Confidence 6543 333 33344432 1 125566665 4565544322221 3568999988
No 122
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=99.33 E-value=5.2e-12 Score=109.17 Aligned_cols=159 Identities=13% Similarity=0.042 Sum_probs=100.2
Q ss_pred ccEEEEEecCCCCcccccC---hhHHHHHHHHhCCEEEEecccccccccCcccccc--cCCCCCcceEEEcCcccCCCcc
Q 048438 4 IPLFLCATIGTTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHF--IDGVEGADSFSLNAHKWFFATL 78 (239)
Q Consensus 4 ~p~~vv~t~gtt~~G~i~p---l~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~--~~~~~~~Ds~~~~~hK~l~~P~ 78 (239)
.+-+|+++..+|.+|.+.| +++|+++|++||+++++|++|+.+.......... +......|+++.++||+++ +.
T Consensus 160 ~~~~v~l~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~ 238 (411)
T 2o0r_A 160 RTRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEVYEHLVFDHARHLPLAGFDGMAERTITISSAAKMFN-CT 238 (411)
T ss_dssp TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHTT-CT
T ss_pred CceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcChhhccCCCCCEEEEeechhhcC-Cc
Confidence 3567777888899999877 5899999999999999999998764321110000 1111248999999999876 44
Q ss_pred c--ceEEEeeCcccccccccCCCCccCCCCceecCCCCCChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCCCCe
Q 048438 79 D--CCCLWATNPEYLKNKATESKPVVDYKDWQITLSRSFRSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSGDKRF 156 (239)
Q Consensus 79 g--~g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~ 156 (239)
| +|+++++ ++.+...... .....++ ........+..+++. +.+.+++..++..++.+++.+.|++. |+
T Consensus 239 G~r~G~~~~~-~~~~~~l~~~----~~~~~~~---~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~-g~ 308 (411)
T 2o0r_A 239 GWKIGWACGP-AELIAGVRAA----KQYLSYV---GGAPFQPAVALALDT-EDAWVAALRNSLRARRDRLAAGLTEI-GF 308 (411)
T ss_dssp TTCEEEEECC-HHHHHHHHHH----HHHHTSC---CCTTHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHH-TC
T ss_pred cceEEEEeeC-HHHHHHHHHH----HhhccCC---CChHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHHHc-CC
Confidence 5 7888874 4433222100 0000011 111222333344543 35567778888889999999999886 88
Q ss_pred EEEcCCCeeEEEEEEcC
Q 048438 157 EVVFPCHFAVVCFRVSP 173 (239)
Q Consensus 157 ~~~~~~~~~iv~f~~~~ 173 (239)
++..+....++.+.++.
T Consensus 309 ~~~~~~~g~~~~~~~~~ 325 (411)
T 2o0r_A 309 AVHDSYGTYFLCADPRP 325 (411)
T ss_dssp EECCCCBSSEEEEECGG
T ss_pred EecCCCeeEEEEEecCC
Confidence 87644333367777754
No 123
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=99.32 E-value=9.5e-12 Score=108.37 Aligned_cols=204 Identities=11% Similarity=-0.017 Sum_probs=115.9
Q ss_pred CccEEEEEecCCCCcccccC---hhHHHHHHHHhCCEEEEecccccccccCccccc---ccCCC--------CCcceEEE
Q 048438 3 LIPLFLCATIGTTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRH---FIDGV--------EGADSFSL 68 (239)
Q Consensus 3 ~~p~~vv~t~gtt~~G~i~p---l~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~---~~~~~--------~~~Ds~~~ 68 (239)
..+.+|+++..+|.+|.+.| +++|+++|++||+++++|.+|+.+......... ..... ....+++.
T Consensus 190 ~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~i~i~ 269 (435)
T 3piu_A 190 LRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVY 269 (435)
T ss_dssp CCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSSCCCCHHHHHHC-------CGGGGEEEEE
T ss_pred CCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcCHHHhccccccccccCCCCCEEEEE
Confidence 35677888888999999866 588888899999999999999875432211110 01110 01237889
Q ss_pred cCcccCCCc-ccceEEEeeCcccccccccCCCCccCCCCceecCCCCCChHHHHHHHHHhC--HHHHHHHHHHHHHHHHH
Q 048438 69 NAHKWFFAT-LDCCCLWATNPEYLKNKATESKPVVDYKDWQITLSRSFRSLKLWFVIRNYG--MENLRHFLRSHVNMARL 145 (239)
Q Consensus 69 ~~hK~l~~P-~g~g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g--~~g~~~~~~~~~~la~~ 145 (239)
++||+++.| ..+|+++..++......... . ............+...+.... .+.+++..++..++.++
T Consensus 270 s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~-------~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 340 (435)
T 3piu_A 270 SLSKDLGLPGFRVGAIYSNDDMVVAAATKM-------S--SFGLVSSQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKK 340 (435)
T ss_dssp ESSSSSCCGGGCEEEEEESCHHHHHHHHHH-------G--GGSCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
T ss_pred eeecccCCCceeEEEEEeCCHHHHHHHHHH-------h--hcCCCCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHH
Confidence 999998633 45788877544332211100 0 000000111111222232211 22445666777888899
Q ss_pred HHHHHhCCCCeEEEcCCCeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhc-CcEEEEEEEE--CC
Q 048438 146 FERLVSGDKRFEVVFPCHFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINAS-GKAYMTNVVL--GG 222 (239)
Q Consensus 146 l~~~l~~~~g~~~~~~~~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~--~g 222 (239)
+.+.|++. |++++.+....++.+.++..... ... .....+.++|.++ |..+.+.... .+
T Consensus 341 l~~~L~~~-g~~~~~~~~g~~~~~~l~~~~~~-------------~~~----~~~~~~~~~l~~~~gi~v~~g~~~~~~~ 402 (435)
T 3piu_A 341 LVSGLQKS-GISCLNGNAGLFCWVDMRHLLRS-------------NTF----EAEMELWKKIVYEVHLNISPGSSCHCTE 402 (435)
T ss_dssp HHHHHHTT-TCEECCCCSSSEEEEECGGGSSS-------------SSH----HHHHHHHHHHHHTSCEECEEGGGGTCSS
T ss_pred HHHHHHhc-CCcccCCCeeEEEEEEccccccc-------------CCc----hhHHHHHHHHHHHCCEEEeCCcccCCCC
Confidence 99999986 88877544446777777642100 000 1123566777666 5544332221 35
Q ss_pred EeEEEEEecCC
Q 048438 223 IYAIRFATGAT 233 (239)
Q Consensus 223 ~~~lR~~~~~~ 233 (239)
..++|+++...
T Consensus 403 ~~~iRi~~~~~ 413 (435)
T 3piu_A 403 PGWFRVCFANL 413 (435)
T ss_dssp TTEEEEECSSS
T ss_pred CCEEEEEeeCC
Confidence 67899997543
No 124
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=99.32 E-value=2.9e-11 Score=103.00 Aligned_cols=194 Identities=12% Similarity=0.121 Sum_probs=114.7
Q ss_pred cEEEEEecCCCCcccccC---hhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCc-ccc
Q 048438 5 PLFLCATIGTTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFAT-LDC 80 (239)
Q Consensus 5 p~~vv~t~gtt~~G~i~p---l~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P-~g~ 80 (239)
+-+|+++..+|.+|.+.| +++|.++|++||+++++|++|+..... + ...... ....+.++.+++|+++.| ..+
T Consensus 155 ~~~v~~~~~~nptG~~~~~~~l~~i~~la~~~~~~li~De~~~~~~~~-~-~~~~~~-~~~~~i~~~s~sK~~~~~G~r~ 231 (375)
T 3op7_A 155 TKMICINNANNPTGAVMDRTYLEELVEIASEVGAYILSDEVYRSFSEL-D-VPSIIE-VYDKGIAVNSLSKTYSLPGIRI 231 (375)
T ss_dssp CCEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECCSCCCSSS-C-CCCHHH-HCTTEEEEEESSSSSSCGGGCC
T ss_pred CeEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccc-C-CCchhh-hcCCEEEEeEChhhcCCcccce
Confidence 456777788899999999 999999999999999999999875432 1 010011 113568889999998644 345
Q ss_pred eEEEeeCcccccccccCCCCccCCCCceecCCCCCChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEc
Q 048438 81 CCLWATNPEYLKNKATESKPVVDYKDWQITLSRSFRSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSGDKRFEVVF 160 (239)
Q Consensus 81 g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~~~~ 160 (239)
|+++. +++......... .. +.. ............+++. ..+.+++..++..++++++.+.|++.++++++.
T Consensus 232 G~v~~-~~~l~~~~~~~~----~~--~~~-~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 302 (375)
T 3op7_A 232 GWVAA-NHQVTDILRDYR----DY--TMI-CAGVFDDLVAQLALAH-YQEILERNRHILEENLAILDQWIEEEPLVSYIR 302 (375)
T ss_dssp EEEEC-CHHHHHHHTTTG----GG--TTS-CCCHHHHHHHHHHHHT-HHHHHHHHHHHHHHHHHHHHHHHHHCTTEEECC
T ss_pred EEEEe-CHHHHHHHHHHH----hh--hcc-CCCcHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHhhCCCceEec
Confidence 77776 444433221100 00 000 0001111222223332 123445566666788899999999888998775
Q ss_pred CCCeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHH-HhcCcEEEEEEEECCEeEEEEEecCC
Q 048438 161 PCHFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESI-NASGKAYMTNVVLGGIYAIRFATGAT 233 (239)
Q Consensus 161 ~~~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l-~~~g~~~~~~~~~~g~~~lR~~~~~~ 233 (239)
+.....+.+.++... + ...+.+++ .+.|..+.+........++|+++...
T Consensus 303 ~~~~~~~~~~~~~~~----------------~-------~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~ 353 (375)
T 3op7_A 303 PAVVSTSFVKIAVDM----------------P-------MEDFCLQLLQEHGVLLVPGNRFERDGYVRLGFACE 353 (375)
T ss_dssp CSSSSCEEEEECCSS----------------C-------HHHHHHHHHHHHCEECEEGGGGTCTTEEEECCCSC
T ss_pred CCCeEEEeEEcCCCC----------------C-------HHHHHHHHHHhCCEEEeChhhhCCCCeEEEEecCC
Confidence 554445555554321 0 12455555 35566655443333357899997654
No 125
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=99.31 E-value=1e-11 Score=106.95 Aligned_cols=142 Identities=13% Similarity=0.083 Sum_probs=85.4
Q ss_pred CCCcccccChhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCc--ccCCCcccceEEEeeCcccc
Q 048438 14 TTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAH--KWFFATLDCCCLWATNPEYL 91 (239)
Q Consensus 14 tt~~G~i~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~h--K~l~~P~g~g~l~~~~~~~l 91 (239)
++.+|.+.|+++|.++|+++|+++++|++|+.+... + ... ... ..|++++++| |+++.|...|+++..+++..
T Consensus 158 ~n~tG~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~-~-~~~-~~~--~~di~~~S~~~sK~~~~~G~~g~~~~~~~~~~ 232 (399)
T 2oga_A 158 VHLYGHPADMDALRELADRHGLHIVEDAAQAHGARY-R-GRR-IGA--GSSVAAFSFYPGKNLGCFGDGGAVVTGDPELA 232 (399)
T ss_dssp BCGGGCCCCHHHHHHHHHHHTCEECEECTTCTTCEE-T-TEE-TTC--TTCEEEEECCTTSSSCCSSCCEEEEESCHHHH
T ss_pred eCCcCCccCHHHHHHHHHHcCCEEEEECcccccCcc-C-Cee-ccc--ccCEEEEeCCCCccCCcCCceEEEEeCCHHHH
Confidence 578999999999999999999999999999876442 2 111 111 2699999985 99875434555555444432
Q ss_pred ccccc--CCCCccCCCCceecCCCCCChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEcCC
Q 048438 92 KNKAT--ESKPVVDYKDWQITLSRSFRSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSGDKRFEVVFPC 162 (239)
Q Consensus 92 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~~~~~~ 162 (239)
..... ..+....+.........+...+..+.++..+ +.+++..++..++++++.+.|++++++++...+
T Consensus 233 ~~l~~~~~~g~~~~~~~~~~g~~~~~~~~~~a~~~~~l--~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~ 303 (399)
T 2oga_A 233 ERLRMLRNYGSRQKYSHETKGTNSRLDEMQAAVLRIRL--AHLDSWNGRRSALAAEYLSGLAGLPGIGLPVTA 303 (399)
T ss_dssp HHHHHHHBTTCSSTTCCCSCCCBCCCCHHHHHHHHHHH--HTHHHHHHHHHHHHHHHHHHTTTCTTCBCCCCC
T ss_pred HHHHHHHhcCccccccccccccCCCcCHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhccCCCccccCCC
Confidence 21110 0000001100000111133444444443322 334556677778999999999998888765433
No 126
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=99.31 E-value=3.2e-11 Score=102.34 Aligned_cols=185 Identities=11% Similarity=0.077 Sum_probs=115.0
Q ss_pred EEEEEecCCCCcccccChhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCc-ccceEEE
Q 048438 6 LFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFAT-LDCCCLW 84 (239)
Q Consensus 6 ~~vv~t~gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P-~g~g~l~ 84 (239)
-+|+++..+|.+|.+.|+++|.++|+++|+++++|++|+...- ......... ...+.++.++||+++.| ..+|+++
T Consensus 151 ~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~li~De~~~~~~~--~~~~~~~~~-~~~~i~~~s~sK~~g~~G~r~G~~~ 227 (360)
T 3hdo_A 151 KVFFLTTPNAPLGPSFPLEYIDELARRCAGMLVLDETYAEFAE--SNALELVRR-HENVVVTRTLSKSYSLAGMRIGLAI 227 (360)
T ss_dssp SEEEEESSCTTTCCCCCHHHHHHHHHHBSSEEEEECTTGGGSS--CCCTHHHHH-CSSEEEEEESTTTTSCTTSCCEEEE
T ss_pred CEEEEeCCCCCCCCCcCHHHHHHHHHHCCCEEEEECChHhhCC--cchhHHhcc-CCCEEEEecchHhhcCCccceeeEe
Confidence 3677788899999999999999999999999999999985311 111011111 12567888999998633 4567777
Q ss_pred eeCcccccccccCCCCccCCCCceecCCCCCChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEcCCCe
Q 048438 85 ATNPEYLKNKATESKPVVDYKDWQITLSRSFRSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSGDKRFEVVFPCHF 164 (239)
Q Consensus 85 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~~~~~~~~ 164 (239)
. +++......... ..+. ........+..+++. .+.++++.++..++.+++.+.|++. ++++. ++..
T Consensus 228 ~-~~~~~~~~~~~~------~~~~---~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~-~~~~ 293 (360)
T 3hdo_A 228 A-RPEVIAALDKIR------DHYN---LDRLAQAACVAALRD--QAYLSECCRRIRETREWFTTELRSI-GYDVI-PSQG 293 (360)
T ss_dssp C-CHHHHHHHHHHS------CSCC---SCHHHHHHHHHHHHC--HHHHHHHHHHHHHHHHHHHHHHHHT-TCEEC-CCSS
T ss_pred e-CHHHHHHHHHhC------CCCC---CCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHC-CCEEc-CCCc
Confidence 6 343332221100 0011 001111222233442 3456788888889999999999987 88875 5666
Q ss_pred eEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhcCcEEEEEEEECCEeEEEEEec
Q 048438 165 AVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINASGKAYMTNVVLGGIYAIRFATG 231 (239)
Q Consensus 165 ~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~ 231 (239)
+.+.+.+++.. ...+.+.|.++|..........+..++|+++.
T Consensus 294 ~~~~~~~~~~~------------------------~~~l~~~l~~~gi~v~~~~~~~~~~~iRis~~ 336 (360)
T 3hdo_A 294 NYLFATPPDRD------------------------GKRVYDGLYARKVLVRHFSDPLLAHGMRISIG 336 (360)
T ss_dssp SEEEEECTTCC------------------------HHHHHHHHHHTTEECBCCCSTTTTTSEEEECC
T ss_pred cEEEEECCCCC------------------------HHHHHHHHHHCCEEEEECCCCCCCCEEEEEcC
Confidence 77777765321 12556667777755433222223578999976
No 127
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=99.30 E-value=1.6e-11 Score=107.03 Aligned_cols=152 Identities=16% Similarity=0.127 Sum_probs=98.8
Q ss_pred ccEEEEEec----CCCCcccccChhHHHHHHHH--hCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCC-
Q 048438 4 IPLFLCATI----GTTAITAVDPLKPLCDVAKQ--FGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFA- 76 (239)
Q Consensus 4 ~p~~vv~t~----gtt~~G~i~pl~~i~~i~~~--~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~- 76 (239)
.+-+|++.. .++.+|.+.|+++|+++||+ +|++++||.+|+.+...... .. . ++|+++.++||++++
T Consensus 176 ~tklV~i~~s~~~p~nptg~i~dl~~i~~la~~~~~g~~livD~a~~~~~~~~~p----~~-~-gaDiv~~S~sK~lgg~ 249 (427)
T 3i16_A 176 SITLVHIQRSTGYGWRRALLIEDIKSIVDCVKNIRKDIICFVDNCYGEFMDTKEP----TD-V-GADLIAGSLIKNIGGG 249 (427)
T ss_dssp TEEEEEEECSCCSSSSCCCCHHHHHHHHHHHHHHCTTSEEEEECTTTTTSSSSCG----GG-G-TCSEEEEETTSGGGTT
T ss_pred CCEEEEEEcCCCCCCCCcccHHHHHHHHHHHHHhCCCCEEEEECCCccccccCCc----cc-c-CCeEEEecCcccCCCC
Confidence 456777766 78999999999999999999 99999999999876532211 11 1 499999999999887
Q ss_pred --cccceEEEeeCcccccccccCCCCccCCCCceecCCCCCChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 048438 77 --TLDCCCLWATNPEYLKNKATESKPVVDYKDWQITLSRSFRSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSGDK 154 (239)
Q Consensus 77 --P~g~g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~ 154 (239)
|. .|+++. +++++...... ..........+-.+.+ .|.+++ |......++++..+.+.++.+.|++.
T Consensus 250 g~~~-gG~i~~-~~~li~~l~~~----~~~~~~g~~~~~~~~~--a~~~l~--gl~~~~~r~~~~~~~a~~la~~L~~~- 318 (427)
T 3i16_A 250 IAPT-GGYLAG-TKDCIEKTSYR----LTVPGIGGECGSTFGV--VRSMYQ--GLFLAPHISMEALKGAILCSRIMELA- 318 (427)
T ss_dssp TCCS-CEEEEE-CHHHHHHHHHH----HSCTTTGGGCCCCTTC--HHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHT-
T ss_pred CCce-EEEEEE-CHHHHHHHHHh----cccCccCccCCccHHH--HHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhC-
Confidence 43 366665 44444332210 0000011111111221 233333 23455678888999999999999987
Q ss_pred CeEEEcCCCee-----EEEEEEcC
Q 048438 155 RFEVVFPCHFA-----VVCFRVSP 173 (239)
Q Consensus 155 g~~~~~~~~~~-----iv~f~~~~ 173 (239)
|+++. |...+ |++|.+.+
T Consensus 319 g~~V~-p~~~~~~~~~i~~i~l~~ 341 (427)
T 3i16_A 319 GFEVM-PKYDEKRSDIIQSIKFND 341 (427)
T ss_dssp TCEEE-SCTTSCCSSSCEEEECSS
T ss_pred CCeec-CCCCCCCccEEEEEEECC
Confidence 67874 43444 88898863
No 128
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=99.30 E-value=1.2e-10 Score=98.79 Aligned_cols=186 Identities=11% Similarity=0.038 Sum_probs=112.5
Q ss_pred cEEEEEecCCCCcccccChhHHHHHHHH--hCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCc-ccce
Q 048438 5 PLFLCATIGTTAITAVDPLKPLCDVAKQ--FGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFAT-LDCC 81 (239)
Q Consensus 5 p~~vv~t~gtt~~G~i~pl~~i~~i~~~--~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P-~g~g 81 (239)
+-+|+++..+|.+|.+.|.++|.++++. +|+++++|.+|+.+.- ........... ..+.+..+++|+++.| ..+|
T Consensus 147 ~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~-~~~~~~~~~~~-~~~i~~~s~sK~~g~~G~r~G 224 (356)
T 1fg7_A 147 VKVVYVCSPNNPTGQLINPQDFRTLLELTRGKAIVVADEAYIEFCP-QASLAGWLAEY-PHLAILRTLSKAFALAGLRCG 224 (356)
T ss_dssp EEEEEEESSCTTTCCCCCHHHHHHHHHHHTTTCEEEEECTTGGGSG-GGCSGGGTTTC-TTEEEEEESSSTTCCGGGCCE
T ss_pred CCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCCEEEEEccchhhcC-CCcHHHHHhhC-CCEEEEecchHhhcCchhhhE
Confidence 4567778888999999886665555443 8999999999986541 11111111221 3678899999997533 2368
Q ss_pred EEEeeCcccccccccCCCCccCCCCceecCCCCCChHHHHHHHHHhCHHH---HHHHHHHHHHHHHHHHHHHhCCCCeEE
Q 048438 82 CLWATNPEYLKNKATESKPVVDYKDWQITLSRSFRSLKLWFVIRNYGMEN---LRHFLRSHVNMARLFERLVSGDKRFEV 158 (239)
Q Consensus 82 ~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~g---~~~~~~~~~~la~~l~~~l~~~~g~~~ 158 (239)
++++ +++.+....... ..| ....+....+...+...+ +++..++..++.+++.+.|++++++..
T Consensus 225 ~~~~-~~~~~~~l~~~~------~~~------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 291 (356)
T 1fg7_A 225 FTLA-NEEVINLLMKVI------APY------PLSTPVADIAAQALSPQGIVAMRERVAQIIAEREYLIAALKEIPCVEQ 291 (356)
T ss_dssp EEEE-CHHHHHHHHHHS------CSS------CSCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEEE
T ss_pred EEEe-CHHHHHHHHHhc------CCC------CCCHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHhCCCceE
Confidence 8887 444433221100 011 122344444555555444 677777888899999999998866544
Q ss_pred EcCCCeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhcCcEEEE-EEEECCEeEEEEEec
Q 048438 159 VFPCHFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINASGKAYMT-NVVLGGIYAIRFATG 231 (239)
Q Consensus 159 ~~~~~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~-~~~~~g~~~lR~~~~ 231 (239)
+.++..+.+.+++++ ...+.++|.++|..... ........++|+++.
T Consensus 292 ~~~~~~~~~~~~~~~--------------------------~~~l~~~L~~~gI~v~~~g~~~~~~~~iRis~~ 339 (356)
T 1fg7_A 292 VFDSETNYILARFKA--------------------------SSAVFKSLWDQGIILRDQNKQPSLSGCLRITVG 339 (356)
T ss_dssp ECCCSSSEEEEEETT--------------------------HHHHHHHHHHTTEECEECTTSTTCTTEEEEECC
T ss_pred ECCCCCeEEEEECCC--------------------------HHHHHHHHHHCCEEEEECCCCCCCCCeEEEEeC
Confidence 456667778777751 01566677666655443 211111248999986
No 129
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.30 E-value=2.3e-11 Score=104.70 Aligned_cols=158 Identities=13% Similarity=0.095 Sum_probs=95.5
Q ss_pred cEEEEEecCCCCcccccChhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCcccceEEE
Q 048438 5 PLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLW 84 (239)
Q Consensus 5 p~~vv~t~gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~ 84 (239)
+-+|+++. .+|...|+++|.++|+++|+++++|+||+.+....... ...+..+|+++++.||+++ |.++|+++
T Consensus 123 ~~~v~~~~---~~G~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~---~~~~~~~~~~s~s~~K~l~-~~~~G~~~ 195 (394)
T 1o69_A 123 PKALILTH---LYGNAAKMDEIVEICKENDIVLIEDAAEALGSFYKNKA---LGTFGEFGVYSYNGNKIIT-TSGGGMLI 195 (394)
T ss_dssp CCEEEEEC---GGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEE---TTSSSSEEEEECCTTSSSC-CSSCEEEE
T ss_pred ceEEEEEC---CCCChhhHHHHHHHHHHcCCEEEEECcCcccceeCCcc---cccccCcEEEEEeCCccCC-CCCceEEE
Confidence 44555553 78999999999999999999999999998654432210 1112248999999999865 67899998
Q ss_pred eeCcccccccccC-CCCccCCCCce-ecCCCCCCh--HHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEc
Q 048438 85 ATNPEYLKNKATE-SKPVVDYKDWQ-ITLSRSFRS--LKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSGDKRFEVVF 160 (239)
Q Consensus 85 ~~~~~~l~~~~~~-~~~~~~~~~~~-~~~~~~~~~--~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~~~~ 160 (239)
+++++.+...... .........++ .+.+.+++. +....++.. .+.+++++++..++++++.+.|++. +++..
T Consensus 196 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~--l~~l~~~~~~~~~~~~~l~~~L~~~--~~~~~ 271 (394)
T 1o69_A 196 GKNKEKIEKARFYSTQARENCLHYEHLDYGYNYRLSNVLGAIGVAQ--MEVLEQRVLKKREIYEWYKEFLGEY--FSFLD 271 (394)
T ss_dssp ESCHHHHHHHHHHTBTCCCSSSSCCCSSCCCBCBCCHHHHHHHHHH--HTTHHHHHHHHHHHHHHHHHHHTTT--EECCC
T ss_pred ECCHHHHHHHHHHHHhccccCccccccccCcccCcCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhccc--ccccC
Confidence 8654433221100 00000000011 112222222 222222222 2345677888889999999999886 66654
Q ss_pred CCC---ee--EEEEEEcC
Q 048438 161 PCH---FA--VVCFRVSP 173 (239)
Q Consensus 161 ~~~---~~--iv~f~~~~ 173 (239)
++. .+ +++|.+++
T Consensus 272 ~~~~~~~~~~~~~i~~~~ 289 (394)
T 1o69_A 272 ELENSRSNRWLSTALINF 289 (394)
T ss_dssp CCTTEECCCSSEEEEESC
T ss_pred CCCCCcceeEEEEEEecc
Confidence 321 23 67888763
No 130
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=99.30 E-value=2.9e-11 Score=104.86 Aligned_cols=150 Identities=15% Similarity=0.046 Sum_probs=96.8
Q ss_pred cEEEEEec----CCCCcccccChhHHHHHHHH--hCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCcc
Q 048438 5 PLFLCATI----GTTAITAVDPLKPLCDVAKQ--FGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATL 78 (239)
Q Consensus 5 p~~vv~t~----gtt~~G~i~pl~~i~~i~~~--~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~ 78 (239)
+-+|++.. .++.+|.+.|+++|+++||+ +|+++|||.+|+.+...... . .. ++|+++.++||+++++.
T Consensus 160 tklV~i~~s~g~p~nptg~v~~l~~I~~la~~~~~~~~livD~a~~~~~~~~~p----~-~~-g~Div~~S~sK~lgg~~ 233 (409)
T 3jzl_A 160 TKMIGIQRSRGYADRPSFTIEKIKEMIVFVKNINPEVIVFVDNCYGEFVEYQEP----P-EV-GADIIAGSLIKNPGGGL 233 (409)
T ss_dssp EEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCTTTSSCCS----G-GG-TCSEEEEETTSGGGTTT
T ss_pred CeEEEEECCCCCCCCCcCccccHHHHHHHHHhhCCCCEEEEeCCcccccccCCc----c-cc-CCeEEEECccccCCccC
Confidence 56677777 78999999999999999999 99999999999876532211 1 11 49999999999988753
Q ss_pred --cceEEEeeCccccccccc--CCCCccCCCCceecCCCCCChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 048438 79 --DCCCLWATNPEYLKNKAT--ESKPVVDYKDWQITLSRSFRSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSGDK 154 (239)
Q Consensus 79 --g~g~l~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~ 154 (239)
..|+++. +++++..... .... .....+..... .+.+++ +......++++..+.++++.+.|++.
T Consensus 234 ~~~GG~v~~-~~~li~~l~~~~~~~~------~g~~~g~~~~~--~~~~l~--gl~~~~~r~~~~~~~a~~la~~L~~~- 301 (409)
T 3jzl_A 234 AKTGGYIAG-KEALVDLCGYRLTTPG------IGREAGASLYS--LLEMYQ--GFFLAPHVTAQAIKGARFTAAMLAEF- 301 (409)
T ss_dssp CSSCEEEEE-CHHHHHHHHHHHSCTT------TGGGCCCCTTC--HHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHT-
T ss_pred CceEEEEEe-CHHHHHHHHHHhcccc------ccccccccHHH--HHHHHH--HHhhHHHHHHHHHHHHHHHHHHHHhC-
Confidence 1355554 4544433221 0000 00111111111 122333 23445678888899999999999997
Q ss_pred CeEEEcCCCee-----EEEEEEcC
Q 048438 155 RFEVVFPCHFA-----VVCFRVSP 173 (239)
Q Consensus 155 g~~~~~~~~~~-----iv~f~~~~ 173 (239)
|+++. |.... |++|.+.+
T Consensus 302 g~~v~-p~~~~~~~~~i~~i~l~~ 324 (409)
T 3jzl_A 302 GVEAD-PVWDAPRTDLIQSVSFHN 324 (409)
T ss_dssp TCEEE-SCTTSCCSSSCCEEECSC
T ss_pred CCccc-CCCCCCCccEEEEEEeCC
Confidence 77874 43333 88888853
No 131
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=99.30 E-value=1.2e-11 Score=108.93 Aligned_cols=79 Identities=18% Similarity=0.234 Sum_probs=64.9
Q ss_pred cEEEEEecCCCCcccccChhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCcccc--eE
Q 048438 5 PLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATLDC--CC 82 (239)
Q Consensus 5 p~~vv~t~gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~--g~ 82 (239)
+-+|+++..+|.+|.+.|+++|+++|++||+++++|++|+.+....+ .. + ++|+++.++||++++|.|+ |+
T Consensus 218 tk~v~l~~p~NptG~v~~l~~i~~la~~~gi~livDea~~~g~~~~~-----~~-~-~~div~~S~sK~~~g~~Gl~~G~ 290 (464)
T 1ibj_A 218 TKLVWLESPTNPRQQISDIRKISEMAHAQGALVLVDNSIMSPVLSRP-----LE-L-GADIVMHSATKFIAGHSDVMAGV 290 (464)
T ss_dssp EEEEEECSSCTTTCCCCCHHHHHHHHHTTTCEEEEECTTTCTTTCCG-----GG-T-TCSEEEEETTTTTTCSSCCCCEE
T ss_pred ceEEEEeCCCCCCCEeecHHHHHHHHHHcCCEEEEECCCcccccCCh-----hh-c-CCEEEEECCcccccCCCCCcEEE
Confidence 56788889999999999999999999999999999999987644212 11 2 3999999999999998876 88
Q ss_pred EEeeCccc
Q 048438 83 LWATNPEY 90 (239)
Q Consensus 83 l~~~~~~~ 90 (239)
++++++..
T Consensus 291 l~~~~~~l 298 (464)
T 1ibj_A 291 LAVKGEKL 298 (464)
T ss_dssp EEECSHHH
T ss_pred EEEChHHH
Confidence 88765433
No 132
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=99.30 E-value=3.9e-11 Score=102.25 Aligned_cols=195 Identities=12% Similarity=0.057 Sum_probs=113.7
Q ss_pred cEEEEEecCCCCcccccC---hhHHHHHHHHhCCEEEEecccccccccCcccccccCCC----CCcceEEEcCcccCC-C
Q 048438 5 PLFLCATIGTTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGV----EGADSFSLNAHKWFF-A 76 (239)
Q Consensus 5 p~~vv~t~gtt~~G~i~p---l~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~----~~~Ds~~~~~hK~l~-~ 76 (239)
+-+|+++..+|.+|.+.| +++|+++|++||+++++|++|+........... +..+ ...+.++.++||+++ .
T Consensus 157 ~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~-~~~~~~~~~~~~i~~~s~sK~~~~~ 235 (383)
T 3kax_A 157 VKLMLLCSPHNPIGRVWKKEELTKLGSLCTKYNVIVVADEIHSDIIYADHTHTP-FASLSEELAARTITCMAPSKTFNIA 235 (383)
T ss_dssp CCEEEEESSBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCC-GGGSCHHHHTTEEEEECSHHHHTCG
T ss_pred CeEEEEeCCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCcee-HhhcCccccCcEEEEEEChhhccCc
Confidence 456677888999999977 555666699999999999999865432211111 1111 125588999999986 3
Q ss_pred cccceEEEeeCcccccccccCCCCccCCCCceecCCCCCChHHHHHHHHHh--CHHHHHHHHHHHHHHHHHHHHHHhC-C
Q 048438 77 TLDCCCLWATNPEYLKNKATESKPVVDYKDWQITLSRSFRSLKLWFVIRNY--GMENLRHFLRSHVNMARLFERLVSG-D 153 (239)
Q Consensus 77 P~g~g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~-~ 153 (239)
...+|+++..++.......... ..+.. .....+....+...+ ..+.++++.++..++.+++.+.|++ +
T Consensus 236 G~r~G~~~~~~~~~~~~~~~~~------~~~~~---~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 306 (383)
T 3kax_A 236 GLQASIIIIPNEKLRQAFTSIQ------YRQGF---HGLNIFAYTAMQSAYTECNDWLNEIRFYIEDNAKFACEYIKDHI 306 (383)
T ss_dssp GGCCEEEECCCHHHHHHHHHHH------HHTTC---CCCCHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred chhheEEEeCCHHHHHHHHHHH------hhccc---CCCCHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 3456777764443332221000 00000 011223333333322 3445677778888999999999987 7
Q ss_pred CCeEEEcCCCeeEEE-EEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHh-cCcEEEEEEEE--CCEeEEEEE
Q 048438 154 KRFEVVFPCHFAVVC-FRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINA-SGKAYMTNVVL--GGIYAIRFA 229 (239)
Q Consensus 154 ~g~~~~~~~~~~iv~-f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~--~g~~~lR~~ 229 (239)
++++++.+ ..+++. +.++..+. + ...+.+.|.+ .|....+.... .+..++|++
T Consensus 307 ~~~~~~~~-~~~~~~~~~~~~~~~---------------~-------~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~ 363 (383)
T 3kax_A 307 PTLSVMKP-EGSFLLWIDCSALNL---------------S-------QDERTKLLEEKGKIIVEPGEKYGLGGEEHIGIN 363 (383)
T ss_dssp TTCEECCC-SBSSEEEEECGGGCC---------------C-------HHHHHHHHHHTSCEECEESGGGCTTCTTEEEEE
T ss_pred CCceEecC-CceEEEEEEccccCC---------------C-------HHHHHHHHHhhCCEEeECchhhcCCCCCeEEEE
Confidence 89988744 444443 66653211 0 1256677764 45544432222 235789999
Q ss_pred ecC
Q 048438 230 TGA 232 (239)
Q Consensus 230 ~~~ 232 (239)
++.
T Consensus 364 ~~~ 366 (383)
T 3kax_A 364 IGC 366 (383)
T ss_dssp CSS
T ss_pred EcC
Confidence 874
No 133
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=99.30 E-value=2.5e-11 Score=105.54 Aligned_cols=150 Identities=13% Similarity=0.162 Sum_probs=103.5
Q ss_pred cEEEEEecCCCCcccccChhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCccc--ceE
Q 048438 5 PLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATLD--CCC 82 (239)
Q Consensus 5 p~~vv~t~gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g--~g~ 82 (239)
+-+|++...+|.+|.+.|+++|+++|+++|+++++|.+|+.+....+ .. . ++|+++.+++|+++++.. .|+
T Consensus 167 t~~v~le~p~NptG~~~~l~~i~~la~~~g~~livDe~~~~~~~~~~-----~~-~-g~div~~S~sK~l~~~G~~~~G~ 239 (414)
T 3ndn_A 167 TQAVFFETPSNPMQSLVDIAAVTELAHAAGAKVVLDNVFATPLLQQG-----FP-L-GVDVVVYSGTKHIDGQGRVLGGA 239 (414)
T ss_dssp CSEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTHHHHCCC-----GG-G-TCSEEEEETTTTTTCSSCCCCEE
T ss_pred CeEEEEECCCCCCCccccHHHHHHHHHHcCCEEEEECCCcccccCCc-----hh-c-CCCeEeccCCccccCCCCceEEE
Confidence 45677788999999999999999999999999999999986654322 11 1 389999999999876542 677
Q ss_pred EEeeCcccccccccCCCCccCCCCceecCCCCCChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEcCC
Q 048438 83 LWATNPEYLKNKATESKPVVDYKDWQITLSRSFRSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSGDKRFEVVFPC 162 (239)
Q Consensus 83 l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~~~~~~ 162 (239)
++.+ ++.+...... .....+........|.+++. .+.+..++++..+.++++.+.|++.|++..+..|
T Consensus 240 vv~~-~~~~~~~l~~---------~~~~~g~~~~~~~a~~~~~~--l~~l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p 307 (414)
T 3ndn_A 240 ILGD-REYIDGPVQK---------LMRHTGPAMSAFNAWVLLKG--LETLAIRVQHSNASAQRIAEFLNGHPSVRWVRYP 307 (414)
T ss_dssp EEEC-HHHHTTHHHH---------HHHHHCCCCCHHHHHHHHHH--GGGHHHHHHHHHHHHHHHHHHHHTCTTEEEEECT
T ss_pred EEEC-HHHHHHHHHH---------HHHHcCCCCCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhcCCCEeEEECC
Confidence 7664 3333211100 00011222344555655553 3456778888889999999999998888654322
Q ss_pred -----------------CeeEEEEEEcC
Q 048438 163 -----------------HFAVVCFRVSP 173 (239)
Q Consensus 163 -----------------~~~iv~f~~~~ 173 (239)
..++++|.+++
T Consensus 308 ~l~~~p~~~~~~~~~~g~G~~l~~~l~~ 335 (414)
T 3ndn_A 308 YLPSHPQYDLAKRQMSGGGTVVTFALDC 335 (414)
T ss_dssp TSTTSTTHHHHHHHCSSCCSEEEEEECS
T ss_pred CCCCCcCHHHHHHhCCCCceEEEEEEcC
Confidence 24689999975
No 134
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.30 E-value=2.4e-11 Score=104.17 Aligned_cols=199 Identities=11% Similarity=0.014 Sum_probs=115.9
Q ss_pred ccEEEEEecCCCCcccccC---hhHHHHHHHHhCCEEEEecccccccccCcccccccCCCC-C-cceEEEcCcccCCCc-
Q 048438 4 IPLFLCATIGTTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVE-G-ADSFSLNAHKWFFAT- 77 (239)
Q Consensus 4 ~p~~vv~t~gtt~~G~i~p---l~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~-~-~Ds~~~~~hK~l~~P- 77 (239)
.|-+|+++..+|.+|.+.| +++|+++|++||+++++|.+|+.+......... +..+. . .|. +.++||+++.|
T Consensus 162 ~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~-~~~~~~~~~d~-~~s~sK~~~~~G 239 (390)
T 1d2f_A 162 ECKIMLLCSPQNPTGKVWTCDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIP-WSNVARGDWAL-LTSGSKSFNIPA 239 (390)
T ss_dssp TEEEEEEESSCTTTCCCCCTTHHHHHHHHHHHTTCEEEEECTTTTCBCSSSCCCC-GGGTCCSSEEE-EECSHHHHTCGG
T ss_pred CCeEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcC-HHHcchhhHhh-ccCccHhhcccC
Confidence 4566777788899999988 889999999999999999999875432111111 11221 1 266 99999998633
Q ss_pred ccceEEEeeCcccccccccCCCCccCCCCceecCCCCCChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhC-CCCe
Q 048438 78 LDCCCLWATNPEYLKNKATESKPVVDYKDWQITLSRSFRSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSG-DKRF 156 (239)
Q Consensus 78 ~g~g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~-~~g~ 156 (239)
..+|++++.+++......... . ....+.............+++. +.+.+++..++..++.+++.+.|++ +|++
T Consensus 240 ~r~G~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 313 (390)
T 1d2f_A 240 LTGAYGIIENSSSRDAYLSAL----K-GRDGLSSPSVLALTAHIAAYQQ-GAPWLDALRIYLKDNLTYIADKMNAAFPEL 313 (390)
T ss_dssp GCCEEEEECSHHHHHHHHHHH----H-TTSCCCSCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHHCSSC
T ss_pred hhheEEEECCHHHHHHHHHHH----h-hhcccCCCCHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHHHHhhCCCC
Confidence 236888875544332221100 0 0000000001111222233432 3455677777888999999999988 7888
Q ss_pred EEEcCCCeeEE-EEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHH-hcCcEEEEEEEE--CCEeEEEEEecC
Q 048438 157 EVVFPCHFAVV-CFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESIN-ASGKAYMTNVVL--GGIYAIRFATGA 232 (239)
Q Consensus 157 ~~~~~~~~~iv-~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~--~g~~~lR~~~~~ 232 (239)
+++ ++..+++ .+.++..+. + ...+.+.|. +.|..+.+.... .+..++|+++..
T Consensus 314 ~~~-~~~~~~~~~~~~~~~~~---------------~-------~~~l~~~l~~~~gi~v~~g~~f~~~~~~~~Ris~~~ 370 (390)
T 1d2f_A 314 NWQ-IPQSTYLAWLDLRPLNI---------------D-------DNALQKALIEQEKVAIMPGYTYGEEGRGFVRLNAGC 370 (390)
T ss_dssp CCC-CCSBCSEEEEECGGGCC---------------C-------HHHHHHHHHHTTCEECEEGGGGCGGGTTEEEEECCS
T ss_pred EEe-cCCccEEEEEEccccCC---------------C-------HHHHHHHHHHHcCEEeeCccccCCCCCCeEEEEecC
Confidence 765 4445544 466653110 0 125667777 456554433222 134689999886
Q ss_pred C
Q 048438 233 T 233 (239)
Q Consensus 233 ~ 233 (239)
+
T Consensus 371 ~ 371 (390)
T 1d2f_A 371 P 371 (390)
T ss_dssp C
T ss_pred C
Confidence 3
No 135
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=99.29 E-value=9.9e-12 Score=106.48 Aligned_cols=149 Identities=17% Similarity=0.185 Sum_probs=89.4
Q ss_pred CCCcccccChhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCc--ccCCCcccceEEEeeCcccc
Q 048438 14 TTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAH--KWFFATLDCCCLWATNPEYL 91 (239)
Q Consensus 14 tt~~G~i~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~h--K~l~~P~g~g~l~~~~~~~l 91 (239)
++.+|.+.|+++|.++|+++|+++++|++|+.+..... +. + +. .|++++++| |+++++ ..|+++..+++..
T Consensus 134 ~~~~G~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~~~--~~-~-~~--~d~~~~S~~k~K~l~~~-~~g~~~~~~~~~~ 206 (393)
T 1mdo_A 134 VHYAGAPADLDAIYALGERYGIPVIEDAAHATGTSYKG--RH-I-GA--RGTAIFSFHAIKNITCA-EGGIVVTDNPQFA 206 (393)
T ss_dssp BCGGGCCCCHHHHHHHHHHHTCCBCEECTTCTTCEETT--EE-T-TS--SSEEEEECCTTSSSCSS-SCEEEEESCHHHH
T ss_pred eCCCCCcCCHHHHHHHHHHcCCeEEEECccccCCeECC--ee-c-CC--CCeEEEeCCCCCccccc-cceEEEeCCHHHH
Confidence 35799999999999999999999999999987644321 11 1 11 799999999 998765 3566665444332
Q ss_pred ccccc--CCCCccC-------CCCceec---CCC--CCChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCCCCeE
Q 048438 92 KNKAT--ESKPVVD-------YKDWQIT---LSR--SFRSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSGDKRFE 157 (239)
Q Consensus 92 ~~~~~--~~~~~~~-------~~~~~~~---~~~--~~~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~ 157 (239)
..... ..+...+ ...+.+. .+. +...+....++.. .+.+++..++..++++++.+.|++++ ++
T Consensus 207 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~~~--l~~~~~~~~~~~~~~~~l~~~L~~~~-~~ 283 (393)
T 1mdo_A 207 DKLRSLKFHGLGVDAWDRQSGGRAPQAEVLAPGYKYNLPDLNAAIALAQ--LQKLDALNARRAAIAAQYHQAMADLP-FQ 283 (393)
T ss_dssp HHHHHHTBTTEECC-----------CCEESSCCCBCCCCHHHHHHHHHH--HHTHHHHHHHHHHHHHHHHHHHHTSS-CE
T ss_pred HHHHHHHhcCCcccchhhhcccccccccccccCccCCCCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhcCC-cc
Confidence 21110 0000000 0011111 111 2233333332222 34566777888899999999999875 88
Q ss_pred EEcCC------CeeEEEEEEc
Q 048438 158 VVFPC------HFAVVCFRVS 172 (239)
Q Consensus 158 ~~~~~------~~~iv~f~~~ 172 (239)
+...+ ...++.++++
T Consensus 284 ~~~~~~~~~~~~~~~~~v~~~ 304 (393)
T 1mdo_A 284 PLSLPSWEHIHAWHLFIIRVD 304 (393)
T ss_dssp ECCCCSSCEECCCSCEEEECC
T ss_pred cccCCCCCCCceeEEEEEEec
Confidence 76432 2236777775
No 136
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=99.29 E-value=6.7e-12 Score=107.93 Aligned_cols=189 Identities=15% Similarity=0.094 Sum_probs=113.5
Q ss_pred EEecCCCCcccccChh---HHHHHHHHhCCEEEEecccccccccCcccccccCCCC-----CcceEEEcCcccCCCc-cc
Q 048438 9 CATIGTTAITAVDPLK---PLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVE-----GADSFSLNAHKWFFAT-LD 79 (239)
Q Consensus 9 v~t~gtt~~G~i~pl~---~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~-----~~Ds~~~~~hK~l~~P-~g 79 (239)
+.+..+|.+|.+.|.+ +|+++|++||+++++|.+|+.+......... +..+. ...+++.++||+++ | ..
T Consensus 168 ~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~-~~~~~~~~~~~~~i~~~s~sK~~~-~G~r 245 (397)
T 2zyj_A 168 LIPSFQNPTGGLTPLPARKRLLQMVMERGLVVVEDDAYRELYFGEARLPS-LFELAREAGYPGVIYLGSFSKVLS-PGLR 245 (397)
T ss_dssp ECCBSCTTTCCBCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCSSCCCCC-HHHHHHHHTCCCEEEEEESTTTTC-GGGC
T ss_pred ECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEeCCcccccCCCCCCCc-hhhhCcccCCCeEEEEeccccccc-ccce
Confidence 4567789999988855 8999999999999999999875432111000 11111 13378899999988 5 45
Q ss_pred ceEEEeeCcccccccccCCCCccCCCCceecCCCCCChHHHHHHHHHh--CH-HHHHHHHHHHHHHHHHHHHHHhC-CC-
Q 048438 80 CCCLWATNPEYLKNKATESKPVVDYKDWQITLSRSFRSLKLWFVIRNY--GM-ENLRHFLRSHVNMARLFERLVSG-DK- 154 (239)
Q Consensus 80 ~g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--g~-~g~~~~~~~~~~la~~l~~~l~~-~~- 154 (239)
+|+++++ ++.+....... ..+. .+. ..+....+...+ +. +.+++..++..++.+++.+.|++ .|
T Consensus 246 ~G~~~~~-~~~~~~l~~~~------~~~~--~~~--~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 314 (397)
T 2zyj_A 246 VAFAVAH-PEALQKLVQAK------QGAD--LHT--PMLNQMLVHELLKEGFSERLERVRRVYREKAQAMLHALDREVPK 314 (397)
T ss_dssp CEEEECC-HHHHHHHHHHH------HHHH--SSC--CHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHSCT
T ss_pred eEEEecC-HHHHHHHHHHH------Hhhc--CCC--CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 7888874 33332221000 0000 111 122222222222 21 34666677777888899999986 56
Q ss_pred CeEEEcCCCeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhcCcEEEEEEEE----CCEeEEEEEe
Q 048438 155 RFEVVFPCHFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINASGKAYMTNVVL----GGIYAIRFAT 230 (239)
Q Consensus 155 g~~~~~~~~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~----~g~~~lR~~~ 230 (239)
|+++..+...+.+.+.++... + ...+.+.|.++|..+...... .+..++|+++
T Consensus 315 g~~~~~~~~g~~~~~~~~~~~----------------~-------~~~~~~~l~~~gi~v~~g~~f~~~~~~~~~iRis~ 371 (397)
T 2zyj_A 315 EVRYTRPKGGMFVWMELPKGL----------------S-------AEGLFRRALEENVAFVPGGPFFANGGGENTLRLSY 371 (397)
T ss_dssp TSEECCCSBSSEEEEECSTTC----------------C-------HHHHHHHHHHTTEEEEESGGGCTTSCCTTEEEEEC
T ss_pred CeEEccCCccEEEEEEcCCCC----------------C-------HHHHHHHHHHCCCEEechHHhcCCCCCCCeEEEEc
Confidence 688776656677778875311 0 125667777776555443222 1356899998
Q ss_pred cCC
Q 048438 231 GAT 233 (239)
Q Consensus 231 ~~~ 233 (239)
..+
T Consensus 372 ~~~ 374 (397)
T 2zyj_A 372 ATL 374 (397)
T ss_dssp SSS
T ss_pred CCC
Confidence 875
No 137
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.29 E-value=1.5e-11 Score=106.89 Aligned_cols=194 Identities=11% Similarity=0.092 Sum_probs=115.1
Q ss_pred ccEEE-EEecCCCCcccccC---hhHHHHHHHHhCCEEEEecccccccccCcccccc--cCCCCCcceEEEcCcccCCCc
Q 048438 4 IPLFL-CATIGTTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHF--IDGVEGADSFSLNAHKWFFAT 77 (239)
Q Consensus 4 ~p~~v-v~t~gtt~~G~i~p---l~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~--~~~~~~~Ds~~~~~hK~l~~P 77 (239)
.+-+| +.+..+|.+|.+.| +++|+++|++||+++++|.+|+.+.......... +.. ...++++.+++|+++ |
T Consensus 187 ~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~-~~~~i~~~s~sK~~~-~ 264 (425)
T 1vp4_A 187 QVKFIYVVSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFKIGG-PERVVLLNTFSKVLA-P 264 (425)
T ss_dssp GEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSCCCCCHHHHHC-TTTEEEEEESTTTTC-G
T ss_pred CceEEEECCCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHHhCC-CCCEEEEeccccccc-c
Confidence 45565 56778899999877 5788999999999999999998754321110000 111 136788999999987 4
Q ss_pred -ccceEEEeeCcccccccccCCCCccCCCCceecCCCCCChHHHHH---HHHHhC-HHHHHHHHHHHHHHHHHHHHHHhC
Q 048438 78 -LDCCCLWATNPEYLKNKATESKPVVDYKDWQITLSRSFRSLKLWF---VIRNYG-MENLRHFLRSHVNMARLFERLVSG 152 (239)
Q Consensus 78 -~g~g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~l~~~g-~~g~~~~~~~~~~la~~l~~~l~~ 152 (239)
..+|+++++ ++.+...... . ..+. .+. ..+..+. +++... .+.+++..++..++.+++.+.|++
T Consensus 265 G~r~G~~~~~-~~~~~~l~~~----~--~~~~--~~~--~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 333 (425)
T 1vp4_A 265 GLRIGMVAGS-KEFIRKIVQA----K--QSAD--LCS--PAITHRLAARYLERYDLLEQLKPTIELYRRKRTVMLNALEE 333 (425)
T ss_dssp GGCEEEEECC-HHHHHHHHHH----H--HHHH--SSC--CHHHHHHHHHHHHHSCHHHHTHHHHHHHHHHHHHHHHHHHH
T ss_pred ccceEEEeeC-HHHHHHHHHH----h--hhhc--CCC--CHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 236888874 4433222100 0 0000 011 1222333 333321 234566666777888899999876
Q ss_pred C-C---CeEEEcCCCeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhcCcEEEEEEEE----CCEe
Q 048438 153 D-K---RFEVVFPCHFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINASGKAYMTNVVL----GGIY 224 (239)
Q Consensus 153 ~-~---g~~~~~~~~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~----~g~~ 224 (239)
. + |++++.+...+++.+.++.... ...+.+.|.++|..+...... .+..
T Consensus 334 ~~~~~~g~~~~~~~~g~~~~~~~~~~~~-----------------------~~~l~~~l~~~gi~v~~g~~f~~~~~~~~ 390 (425)
T 1vp4_A 334 YFSDIPGVKWVKSEGGLFIWLTLPEGFD-----------------------TWEMFEYAKRKKVFYVPGRVFKVYDEPSP 390 (425)
T ss_dssp HSTTSTTCEECCCSBSSEEEEECCTTCC-----------------------TTTTHHHHHHHTEECEEGGGGCTTCCCCS
T ss_pred hCCCCCceEEecCCccEEEEEEcCCCCC-----------------------HHHHHHHHHHCCCEEECchhhcCCCCCCC
Confidence 3 5 6887756556688888763110 014566676676554433222 2457
Q ss_pred EEEEEecCC
Q 048438 225 AIRFATGAT 233 (239)
Q Consensus 225 ~lR~~~~~~ 233 (239)
++|+++..+
T Consensus 391 ~iRis~~~~ 399 (425)
T 1vp4_A 391 SMRLSFCLP 399 (425)
T ss_dssp EEEEECSSS
T ss_pred eEEEEeCCC
Confidence 899998764
No 138
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=99.28 E-value=4.2e-11 Score=101.99 Aligned_cols=183 Identities=14% Similarity=0.026 Sum_probs=115.0
Q ss_pred cEEEEEecCCCCcccccChhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCc-ccceEE
Q 048438 5 PLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFAT-LDCCCL 83 (239)
Q Consensus 5 p~~vv~t~gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P-~g~g~l 83 (239)
|-+|+++..+|.+|.+.|++++.++|+.+++++++|++|+.+....+ ........+..++++.++||+++.| ..+|++
T Consensus 165 ~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~li~De~~~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~ 243 (369)
T 3cq5_A 165 PDIVFVTTPNNPTGDVTSLDDVERIINVAPGIVIVDEAYAEFSPSPS-ATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYF 243 (369)
T ss_dssp CSEEEEESSCTTTCCCCCHHHHHHHHHHCSSEEEEECTTGGGCCSCC-GGGGTTTCTTTEEEEEESSSTTSCGGGCCEEE
T ss_pred CCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCEEEEECCchhhcCCcc-hHHHHhhCCCCEEEEEechHhcCCcccceEEE
Confidence 44666788899999999999999999999999999999987653211 1111122111568899999998644 236888
Q ss_pred EeeCcccccccccCCCCccCCCCceecCCCCCChHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEcCC
Q 048438 84 WATNPEYLKNKATESKPVVDYKDWQITLSRSFRSLKLWFVIRNY-GMENLRHFLRSHVNMARLFERLVSGDKRFEVVFPC 162 (239)
Q Consensus 84 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~g~~~~~~~~~~la~~l~~~l~~~~g~~~~~~~ 162 (239)
++++ +.+....... ..++ ...+..+.+...+ ..+.+++..++..++.+++.+.|++ .|+++. ++
T Consensus 244 ~~~~-~~~~~l~~~~------~~~~------~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~-~~ 308 (369)
T 3cq5_A 244 VANP-AFIDAVMLVR------LPYH------LSALSQAAAIVALRHSADTLGTVEKLSVERVRVAARLEE-LGYAVV-PS 308 (369)
T ss_dssp EECT-HHHHHHHTTS------CTTC------SCHHHHHHHHHHHHTHHHHHTHHHHHHHHHHHHHHHHHH-HTCEEE-CC
T ss_pred EeCH-HHHHHHHHcC------CCCC------CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHh-CCCEEC-CC
Confidence 8753 3333221100 0011 1223333322222 1345667777888999999999988 488876 55
Q ss_pred CeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhcCcEEEEEEEECCEeEEEEEec
Q 048438 163 HFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINASGKAYMTNVVLGGIYAIRFATG 231 (239)
Q Consensus 163 ~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~ 231 (239)
..+++.+.++. . ...+.+.|.++|...... ....++|+++.
T Consensus 309 ~~~~~~~~~~~-~------------------------~~~l~~~l~~~gi~v~~~---~~~~~iRis~~ 349 (369)
T 3cq5_A 309 ESNFVFFGDFS-D------------------------QHAAWQAFLDRGVLIRDV---GIAGHLRTTIG 349 (369)
T ss_dssp SSSEEEEECCS-S------------------------HHHHHHHHHHTTEECBCC---SCTTEEEEECC
T ss_pred CCeEEEEECCC-C------------------------HHHHHHHHHHCCEEEEEC---CCCCeEEEEeC
Confidence 66788887651 1 114566666666554332 22468999986
No 139
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=99.28 E-value=4.2e-12 Score=110.28 Aligned_cols=160 Identities=9% Similarity=-0.015 Sum_probs=99.9
Q ss_pred ccEEEEEecCCCCcccccC---hhHHHHHHHHhCCEEEEecccccccccCcccccc--cCCCCCcceEEEcCcccCCCcc
Q 048438 4 IPLFLCATIGTTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHF--IDGVEGADSFSLNAHKWFFATL 78 (239)
Q Consensus 4 ~p~~vv~t~gtt~~G~i~p---l~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~--~~~~~~~Ds~~~~~hK~l~~P~ 78 (239)
.+.+|+++..+|.+|.+.| +++|+++|++||+++++|++|+............ +.+....|+++.++||+++ +.
T Consensus 182 ~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~~s~sK~~~-~~ 260 (429)
T 1yiz_A 182 KTKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTITIGSAGKTFS-LT 260 (429)
T ss_dssp TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTSCCCCGGGSTTTGGGEEEEEEHHHHHT-CG
T ss_pred CceEEEECCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCcChhhccCCcCceEEEecchhccC-CC
Confidence 3566777888899999986 9999999999999999999998643311111111 1112248999999999875 44
Q ss_pred c--ceEEEeeCcccccccccCCCCccCCCCceecCCCCCChHHHHHHHHHh----C--HHHHHHHHHHHHHHHHHHHHHH
Q 048438 79 D--CCCLWATNPEYLKNKATESKPVVDYKDWQITLSRSFRSLKLWFVIRNY----G--MENLRHFLRSHVNMARLFERLV 150 (239)
Q Consensus 79 g--~g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----g--~~g~~~~~~~~~~la~~l~~~l 150 (239)
| +|+++++ ++.+...... .....++ ........+..+++.. + .+.+++..++..++.+++.+.|
T Consensus 261 G~r~G~~~~~-~~~~~~l~~~----~~~~~~~---~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L 332 (429)
T 1yiz_A 261 GWKIGWAYGP-EALLKNLQMV----HQNCVYT---CATPIQEAIAVGFETELKRLKSPECYFNSISGELMAKRDYMASFL 332 (429)
T ss_dssp GGCCEEEESC-HHHHHHHHHH----HHTTTCC---CCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHHH
T ss_pred CcceEEEEeC-HHHHHHHHHH----HhhcccC---CChHHHHHHHHHHhcccccccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 6 7888874 3333322110 0000011 0011112233344431 3 3456677777888999999999
Q ss_pred hCCCCeEEEcCCCeeEEEEEEcC
Q 048438 151 SGDKRFEVVFPCHFAVVCFRVSP 173 (239)
Q Consensus 151 ~~~~g~~~~~~~~~~iv~f~~~~ 173 (239)
++. |+++..+....++.+.++.
T Consensus 333 ~~~-g~~~~~~~~g~~~~~~~~~ 354 (429)
T 1yiz_A 333 AEV-GMNPTVPQGGYFMVADWSS 354 (429)
T ss_dssp HHH-TCEEEECSBSSEEEEECCS
T ss_pred HhC-CCcccCCCcceEEEEEccc
Confidence 886 8887755445578888764
No 140
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=99.27 E-value=4.1e-11 Score=101.17 Aligned_cols=187 Identities=10% Similarity=-0.011 Sum_probs=116.3
Q ss_pred ccEEEEEecCCCCcccccChhHHHHHHHH--hCCEEEEecccccccccCc--ccccccCCCCCcceEEEcCcccCC-Ccc
Q 048438 4 IPLFLCATIGTTAITAVDPLKPLCDVAKQ--FGIWVHVDAAYAGSACIFP--EFRHFIDGVEGADSFSLNAHKWFF-ATL 78 (239)
Q Consensus 4 ~p~~vv~t~gtt~~G~i~pl~~i~~i~~~--~gi~lhvD~A~~~~~~~~~--~~~~~~~~~~~~Ds~~~~~hK~l~-~P~ 78 (239)
.+-+|+++..+|.+|.+.|++++.++++. +|+++++|++|+....... ............++++.++||+++ ...
T Consensus 141 ~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~ 220 (354)
T 3ly1_A 141 GPSIVYLVNPNNPTGTITPADVIEPWIASKPANTMFIVDEAYAEFVNDPRFRSISPMITQGAENIILLKTFSKIHAMAGM 220 (354)
T ss_dssp SCEEEEEESSCTTTCCCCCHHHHHHHHHTCCTTEEEEEECTTGGGCCCTTCCCSHHHHHTTCSSEEEEEESSSTTCCGGG
T ss_pred CCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCeEEEEeccHHHhccccccCCHHHHhhhcCCCEEEEeeChhhccChhh
Confidence 46677788889999999999999999888 9999999999986543211 000111111136688999999986 344
Q ss_pred cceEEEeeCcccccccccCCCCccCCCCceecCCCCCChHHHHHHHHHhC-HHHHHHHHHHHHHHHHHHHHHHhCCCCeE
Q 048438 79 DCCCLWATNPEYLKNKATESKPVVDYKDWQITLSRSFRSLKLWFVIRNYG-MENLRHFLRSHVNMARLFERLVSGDKRFE 157 (239)
Q Consensus 79 g~g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g-~~g~~~~~~~~~~la~~l~~~l~~~~g~~ 157 (239)
.+|+++. +++......... ..+ ....+....+...+. .+.++++.++..++.+++.+.|++. +++
T Consensus 221 r~G~~~~-~~~~~~~~~~~~------~~~------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~ 286 (354)
T 3ly1_A 221 RVGYAVA-HPTVIALMGRYV------AGE------KINFSGVDAALASMNDSAFITYSKKSNDVSRQILLKALEDL-KLP 286 (354)
T ss_dssp CCEEEEC-CHHHHHHHGGGT------TCS------CCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHH-TCC
T ss_pred hheeeec-CHHHHHHHHHhc------CCC------CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCe
Confidence 5787776 334333222100 001 111233333333332 2556777888889999999999886 777
Q ss_pred EEcCCCeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhcCcEEEEEEEECCEeEEEEEec
Q 048438 158 VVFPCHFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINASGKAYMTNVVLGGIYAIRFATG 231 (239)
Q Consensus 158 ~~~~~~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~ 231 (239)
++ ++..+++.+.++.. ...+.+.|.++|.. +......+..++|+++.
T Consensus 287 ~~-~~~~~~~~~~~~~~-------------------------~~~~~~~l~~~gi~-v~g~~~~~~~~iRis~~ 333 (354)
T 3ly1_A 287 YL-PSEGNFVFHQLVVP-------------------------LKDYQTHMADAGVL-IGRAFPPADNWCRISLG 333 (354)
T ss_dssp BC-CCCSSEEEEECSSC-------------------------HHHHHHHHHHTTEE-CCCCCTTCTTEEEEECC
T ss_pred EC-CCCceEEEEECCCC-------------------------HHHHHHHHHHCCEE-EeecCCCCCCEEEEEcC
Confidence 65 55667777777541 12556667666654 33211124578999976
No 141
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=99.27 E-value=3.1e-11 Score=102.70 Aligned_cols=196 Identities=13% Similarity=-0.001 Sum_probs=113.1
Q ss_pred cEEEEEecCCCCcccccC---hhHHHHHHHHhCCEEEEecccccccccC-cccccccCCC--CCcceEEEcCcccCCCc-
Q 048438 5 PLFLCATIGTTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSACIF-PEFRHFIDGV--EGADSFSLNAHKWFFAT- 77 (239)
Q Consensus 5 p~~vv~t~gtt~~G~i~p---l~~i~~i~~~~gi~lhvD~A~~~~~~~~-~~~~~~~~~~--~~~Ds~~~~~hK~l~~P- 77 (239)
+.+|+++..+|.+|.+.| +++|+++|++||+++++|.+|+...... ..... +..+ ...+.++.+++|+++.|
T Consensus 151 ~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~-~~~~~~~~~~i~~~s~sK~~g~~G 229 (377)
T 3fdb_A 151 ARSILLCNPYNPLGMVFAPEWLNELCDLAHRYDARVLVDEIHAPLVFDGQHTVAA-GVSDTAASVCITITAPSKAWNIAG 229 (377)
T ss_dssp CCEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGG-GSCHHHHHHEEEEECSTTTTTCGG
T ss_pred CCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccchhhcCCCCCccc-HHHccCCCcEEEEEeChHhccCcc
Confidence 446777788999999876 6667777999999999999998754322 11111 1111 12457889999998533
Q ss_pred ccceEEEeeCcccccccccCCCCccCCCCceecCCCCCChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhC-CCCe
Q 048438 78 LDCCCLWATNPEYLKNKATESKPVVDYKDWQITLSRSFRSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSG-DKRF 156 (239)
Q Consensus 78 ~g~g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~-~~g~ 156 (239)
..+|++++.++......... ..+...............+++. +.+.++++.++..++.+++.+.|++ +|++
T Consensus 230 ~r~G~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 301 (377)
T 3fdb_A 230 LKCAQIIFSNPSDAEHWQQL-------SPVIKDGASTLGLIAAEAAYRY-GTDFLNQEVAYLKNNHDFLLHEIPKRIPGA 301 (377)
T ss_dssp GCCEEEECCSHHHHHHHHHS-------CHHHHCCCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHHSTTC
T ss_pred hhheEEEeCCHHHHHHHHHH-------HHhhcCCCCHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHHhhCCCc
Confidence 34676666554433322110 0000000011111222233332 3455678888888999999999988 7899
Q ss_pred EEEcCCCeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhc-CcEEEEEEEEC--CEeEEEEEecC
Q 048438 157 EVVFPCHFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINAS-GKAYMTNVVLG--GIYAIRFATGA 232 (239)
Q Consensus 157 ~~~~~~~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~--g~~~lR~~~~~ 232 (239)
+++.+....++.+.++..+. + ..+.+.|.++ |..+.+..... +..++|+++..
T Consensus 302 ~~~~~~~~~~~~~~~~~~~~---------------~--------~~~~~~l~~~~gi~v~~g~~~~~~~~~~~Ris~~~ 357 (377)
T 3fdb_A 302 KITPMQATYLMWIDFRDTTI---------------E--------GSPSEFFIEKAKVAMNDGAWFGEDGTGFCRLNFAT 357 (377)
T ss_dssp EECCCSBCSEEEEECTTSCC---------------C--------SCHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCS
T ss_pred eEecCCeeEEEEEECcccCC---------------C--------HHHHHHHHHhCCEEecCChhccCCCCCEEEEEeCC
Confidence 98754433344566654221 0 1344555555 55443322221 35789999874
No 142
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=99.26 E-value=8.1e-11 Score=99.86 Aligned_cols=186 Identities=13% Similarity=0.100 Sum_probs=116.9
Q ss_pred ccEEEEEecCCCCcccccChhHHHHHHH--HhCCEEEEecccccccc--c----CcccccccCCCCCcceEEEcCcccCC
Q 048438 4 IPLFLCATIGTTAITAVDPLKPLCDVAK--QFGIWVHVDAAYAGSAC--I----FPEFRHFIDGVEGADSFSLNAHKWFF 75 (239)
Q Consensus 4 ~p~~vv~t~gtt~~G~i~pl~~i~~i~~--~~gi~lhvD~A~~~~~~--~----~~~~~~~~~~~~~~Ds~~~~~hK~l~ 75 (239)
.+-+|+++..+|.+|.+.|++++.++++ ++|+++++|++|+.+.. . .+... .... ...++++.++||+++
T Consensus 153 ~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~-~~~~-~~~~i~~~s~sK~~~ 230 (365)
T 3get_A 153 EIKLIFLCLPNNPLGECLDASEATEFIKGVNEDCLVVIDAAYNEFASFKDSKKHLEPCE-LIKE-FDNVLYLGTFSKLYG 230 (365)
T ss_dssp TEEEEEEESSCTTTCCCCCHHHHHHHHHTSCTTSEEEEECTTHHHHHHHCGGGCCCHHH-HHHH-CTTEEEEEESSSTTS
T ss_pred CCCEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCccHHHhcccCCcccccHhH-Hhcc-CCCEEEEeecchHhc
Confidence 3567777888999999999999999988 67999999999985442 1 11000 0111 136788999999986
Q ss_pred Cc-ccceEEEeeCcccccccccCCCCccCCCCceecCCCCCChHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHHHHHhCC
Q 048438 76 AT-LDCCCLWATNPEYLKNKATESKPVVDYKDWQITLSRSFRSLKLWFVIRNY-GMENLRHFLRSHVNMARLFERLVSGD 153 (239)
Q Consensus 76 ~P-~g~g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~g~~~~~~~~~~la~~l~~~l~~~ 153 (239)
.| ..+|+++. +++......... ..+. ...+..+.+...+ ..+.+++..++..++.+++.+.|++.
T Consensus 231 ~~G~r~G~~~~-~~~~~~~~~~~~------~~~~------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~ 297 (365)
T 3get_A 231 LGGLRIGYGIA-NANIISAFYKLR------APFN------VSNLALKAAVAAMDDDEFTEKTLENNFSQMELYKEFAKKH 297 (365)
T ss_dssp CTTTCCEEEEE-CHHHHHHHHHHS------CTTC------SCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CcchheEEEEc-CHHHHHHHHHhc------CCCC------cCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 33 45788777 444433221100 0011 1122222222222 23567788888889999999999987
Q ss_pred CCeEEEcCCCeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhcCcEEEEEEEECCEeEEEEEec
Q 048438 154 KRFEVVFPCHFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINASGKAYMTNVVLGGIYAIRFATG 231 (239)
Q Consensus 154 ~g~~~~~~~~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~ 231 (239)
|+++. ++..+.+.+.++... ...+.+.|.++|....+..... ..++|+++.
T Consensus 298 -g~~~~-~~~~~~~~~~~~~~~------------------------~~~~~~~l~~~gi~v~~g~~~~-~~~iRis~~ 348 (365)
T 3get_A 298 -NIKII-DSYTNFITYFFDEKN------------------------STDLSEKLLKKGIIIRNLKSYG-LNAIRITIG 348 (365)
T ss_dssp -TCEEC-CCSSSEEEEECSSSC------------------------HHHHHHHHHTTTEECEECGGGT-CSEEEEECC
T ss_pred -CCEEC-CCCCeEEEEECCCCC------------------------HHHHHHHHHHCCEEEEECccCC-CCEEEEEcC
Confidence 88865 556677777775421 1256667777765544322222 578999976
No 143
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=99.25 E-value=1.3e-10 Score=101.21 Aligned_cols=152 Identities=16% Similarity=0.125 Sum_probs=98.0
Q ss_pred ccEEEEEec----CCCCcccccChhHHHHHHHH--hCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCC-
Q 048438 4 IPLFLCATI----GTTAITAVDPLKPLCDVAKQ--FGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFA- 76 (239)
Q Consensus 4 ~p~~vv~t~----gtt~~G~i~pl~~i~~i~~~--~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~- 76 (239)
.|-+|++.. .++.+|.+.|+++|+++|++ +|++++||.||+.+...... .. . ++|+++.++||++++
T Consensus 176 ~tklV~i~~s~gyp~nptg~v~dl~~i~~ia~~~~~g~~livD~a~~~~~~~~~p----~~-~-gaDiv~~S~sK~lgg~ 249 (427)
T 3hvy_A 176 SIKLIHIQRSTGYGWRKSLRIAEIAEIIKSIREVNENVIVFVDNCYGEFVEEKEP----TD-V-GADIIAGSLIKNIGGG 249 (427)
T ss_dssp TEEEEEEESSCCSSSSCCCCHHHHHHHHHHHHHHCSSSEEEEECTTCTTTSSSCG----GG-G-TCSEEEEETTSGGGTT
T ss_pred CCEEEEEECCCCCCCCccccHHHHHHHHHHHHHhCCCCEEEEECCccccccCCCC----cc-c-CCeEEEECCccccccc
Confidence 456777777 78999999999999999999 89999999999877532211 11 1 389999999999887
Q ss_pred --cccceEEEeeCcccccccccCCCCccCCCCceecCCCCCChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 048438 77 --TLDCCCLWATNPEYLKNKATESKPVVDYKDWQITLSRSFRSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSGDK 154 (239)
Q Consensus 77 --P~g~g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~ 154 (239)
|.| |+++. +++++...... ..........+-.+.. .+.+++ |......++++..+.+.++.+.|++.
T Consensus 250 g~~~G-G~i~~-~~~li~~l~~~----~~~~~~g~~~~~~~~~--a~~~~~--gl~~~~~r~~~~~~~a~~la~~L~~~- 318 (427)
T 3hvy_A 250 IATTG-GYIAG-KEEYVTQATFR----VTVPGIGGECGSTFGV--MRSLYE--GLFMAPHVTIEAVKGAVFCARIMELA- 318 (427)
T ss_dssp TCCSC-EEEEE-CHHHHHHHHHH----HSCTTTGGGCCCCTTC--HHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHT-
T ss_pred ccceE-EEEEE-CHHHHHHHHHH----hhcCCcccccCCCHHH--HHHHHH--hHhHHHHHHHHHHHHHHHHHHHHHhC-
Confidence 443 66655 44444332210 0000011111111221 233333 22344678888899999999999987
Q ss_pred CeEEEcCCCee-----EEEEEEcC
Q 048438 155 RFEVVFPCHFA-----VVCFRVSP 173 (239)
Q Consensus 155 g~~~~~~~~~~-----iv~f~~~~ 173 (239)
|+++. |.... |++|.+.+
T Consensus 319 g~~V~-p~~~~~~~~li~~~~l~~ 341 (427)
T 3hvy_A 319 GFDVL-PKYNDKRTDIIQAIKFND 341 (427)
T ss_dssp TCEEE-SCTTSCCSSSEEEEECSS
T ss_pred CCeec-CCCCCCCceEEEEEeCCC
Confidence 77874 43333 88888853
No 144
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=99.25 E-value=5.5e-12 Score=110.70 Aligned_cols=160 Identities=14% Similarity=0.115 Sum_probs=87.5
Q ss_pred ccEEEEEecCCCCc-ccc---cChhHHHHHHHHhCCEEEEeccccc-ccc-------cC-c-cccccc-CCCCCcceEEE
Q 048438 4 IPLFLCATIGTTAI-TAV---DPLKPLCDVAKQFGIWVHVDAAYAG-SAC-------IF-P-EFRHFI-DGVEGADSFSL 68 (239)
Q Consensus 4 ~p~~vv~t~gtt~~-G~i---~pl~~i~~i~~~~gi~lhvD~A~~~-~~~-------~~-~-~~~~~~-~~~~~~Ds~~~ 68 (239)
.+.+|+++..++.+ |.+ +++++|+++|++||+++|+|+||+. +.. .. . ...... .....+|++++
T Consensus 183 ~~~~vi~~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~D~a~~~e~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~ 262 (467)
T 2oqx_A 183 NVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEYKDWTIEQITRETYKYADMLAM 262 (467)
T ss_dssp GCCCEEEESSBCGGGCBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHCGGGTTSCHHHHHHHHGGGCSEEEE
T ss_pred ceeEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhhhhhhhcccccccccCccHHHHhhhhhccCCeEEE
Confidence 35567777777776 664 5688999999999999999999876 332 01 0 000000 00023788999
Q ss_pred cCcccCCCcccceEEEeeCc---ccccccccCCCCccCCCCceecCCCCCChHHHHHHHHHhCHHHH-HHHHHHHHHHHH
Q 048438 69 NAHKWFFATLDCCCLWATNP---EYLKNKATESKPVVDYKDWQITLSRSFRSLKLWFVIRNYGMENL-RHFLRSHVNMAR 144 (239)
Q Consensus 69 ~~hK~l~~P~g~g~l~~~~~---~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~g~-~~~~~~~~~la~ 144 (239)
++||+++.|.| |+++.++. +.+....... ... .... ..+. ..+..+. ++...-.+.+ ++.+++..++++
T Consensus 263 s~sK~~g~~~G-g~~~~~~~~~~~~~~~~~~~~--~~~-~~~~-~~~~-~~~~~~~-al~~~l~~~~~~~~~~~~~~~~~ 335 (467)
T 2oqx_A 263 SAKKDAMVPMG-GLLCMKDDSFFDVYTECRTLC--VVQ-EGFP-TYGG-LEGGAME-RLAVGLYDGMNLDWLAYRIAQVQ 335 (467)
T ss_dssp ESSSTTCCSSC-EEEEECSGGGHHHHHHHHHHH--HHT-TSSC-CCCC-CCHHHHH-HHHHHHHHTTCHHHHHHHHHHHH
T ss_pred ecccccCCCCc-eEEEecChhHHHHHHHHHHhh--hcc-CCcc-cccc-hhhhHHH-HHHHhhHhhhhHHHHHHHHHHHH
Confidence 99999988855 55555443 1222111000 000 0000 0111 1111111 2211001111 134455567888
Q ss_pred HHHHHHhCCCCeEEEcCCCeeEEEEEEc
Q 048438 145 LFERLVSGDKRFEVVFPCHFAVVCFRVS 172 (239)
Q Consensus 145 ~l~~~l~~~~g~~~~~~~~~~iv~f~~~ 172 (239)
++.+.|++. ++++. +....++.+.++
T Consensus 336 ~l~~~L~~~-~~~~~-~~~~~~~~~~~~ 361 (467)
T 2oqx_A 336 YLVDGLEEI-GVVCQ-QAGGHAAFVDAG 361 (467)
T ss_dssp HHHHHHHHT-TCCEE-EECSSCEEEEHH
T ss_pred HHHHHHHHC-CCeee-cCCceEEEEech
Confidence 999999887 88877 656667777764
No 145
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=99.25 E-value=3.8e-12 Score=111.75 Aligned_cols=159 Identities=14% Similarity=0.161 Sum_probs=86.7
Q ss_pred ccEEEEEecCCCCc-ccc---cChhHHHHHHHHhCCEEEEeccccc-ccccCc----cccc-ccCCC-----CCcceEEE
Q 048438 4 IPLFLCATIGTTAI-TAV---DPLKPLCDVAKQFGIWVHVDAAYAG-SACIFP----EFRH-FIDGV-----EGADSFSL 68 (239)
Q Consensus 4 ~p~~vv~t~gtt~~-G~i---~pl~~i~~i~~~~gi~lhvD~A~~~-~~~~~~----~~~~-~~~~~-----~~~Ds~~~ 68 (239)
.+.+|+++..++.+ |.+ +++++|+++|++||+++|+|++|+. +..... .+.. ....+ ..+|++++
T Consensus 183 ~~~~vi~~~~~np~gG~~~~~~~l~~i~~la~~~gi~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 262 (467)
T 1ax4_A 183 NIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYKNATIKEVIFDMYKYADALTM 262 (467)
T ss_dssp GEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHHHHHCGGGTTCCHHHHHHHHGGGCSEEEE
T ss_pred CeeEEEEeccccCCCccCCChhHHHHHHHHHHHcCCEEEEEchhhhhcchhccccccccCCCchhhhhhhhccccceEEE
Confidence 35677777778888 775 5678999999999999999999765 221000 0000 00000 13789999
Q ss_pred cCcccCCCcccceEEEeeCc-ccccccccCCCCccCCCCceecCCCCCCh-HHHHHHHHHhCHHHHHHHHHHHHHHHHHH
Q 048438 69 NAHKWFFATLDCCCLWATNP-EYLKNKATESKPVVDYKDWQITLSRSFRS-LKLWFVIRNYGMENLRHFLRSHVNMARLF 146 (239)
Q Consensus 69 ~~hK~l~~P~g~g~l~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~g~~g~~~~~~~~~~la~~l 146 (239)
++||+++.|.| |+++.+++ +++....... ... ......++..... ..+..+++.+-. ++.+++..++++++
T Consensus 263 s~sK~~g~~~G-g~~~~~d~~~l~~~~~~~~-~~~--~~~~~~~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l 335 (467)
T 1ax4_A 263 SAKKDPLLNIG-GLVAIRDNEEIFTLARQRC-VPM--EGFVTYGGLAGRDMAAMVQGLEEGTE---EEYLHYRIGQVKYL 335 (467)
T ss_dssp ETTSTTCCSSC-EEEEESSCHHHHHHHHHHH-HHH--TCSTTTTTCCHHHHHHHHHHHHHTTC---HHHHHHHHHHHHHH
T ss_pred eccccCCCCcc-eEEEeCCHHHHHHHHHhhc-ccc--ccccccCCccchHHHHHHHHHHHhhh---hhHHHHHHHHHHHH
Confidence 99999887755 55555434 4432211000 000 0000001111111 112223333211 12444445677888
Q ss_pred HHHHhCCCCeEEEcCCCeeEEEEE
Q 048438 147 ERLVSGDKRFEVVFPCHFAVVCFR 170 (239)
Q Consensus 147 ~~~l~~~~g~~~~~~~~~~iv~f~ 170 (239)
.+.|++ ++++++.+.....+.+.
T Consensus 336 ~~~L~~-~~~~~~~~~~~~~~~~~ 358 (467)
T 1ax4_A 336 GDRLRE-AGIPIQYPTGGHAVFVD 358 (467)
T ss_dssp HHHHHH-TTCCBCSSCCSSEEEEE
T ss_pred HHHHHh-CCCCcccCCCceEEEEe
Confidence 888887 58887666666666666
No 146
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=99.25 E-value=6.2e-11 Score=101.58 Aligned_cols=192 Identities=13% Similarity=0.035 Sum_probs=113.0
Q ss_pred cEEEEEecCCCCcccccC---hhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCC-Ccccc
Q 048438 5 PLFLCATIGTTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFF-ATLDC 80 (239)
Q Consensus 5 p~~vv~t~gtt~~G~i~p---l~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~-~P~g~ 80 (239)
+.+|+++..+|.+|.+.| +++|+++|++||+++++|.+|+....... ... ...+...++++.+++|+++ ....+
T Consensus 162 ~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~-~~~-~~~~~~~~i~~~s~sK~~g~~G~r~ 239 (391)
T 3h14_A 162 LAGLMVASPANPTGTMLDHAAMGALIEAAQAQGASFISDEIYHGIEYEAK-AVT-ALELTDECYVINSFSKYFSMTGWRV 239 (391)
T ss_dssp CSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSC-CCC-GGGTCSSSEEEEESSSTTCCTTSCC
T ss_pred CeEEEECCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEECcchhcccCCC-CcC-hhhcCCCEEEEEechhccCCcccee
Confidence 456777788999999988 88899999999999999999986543211 111 1112236678889999985 33456
Q ss_pred eEEEeeCcccccccccCCCCccCCCCceecCCCCCChHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEE
Q 048438 81 CCLWATNPEYLKNKATESKPVVDYKDWQITLSRSFRSLKLWFVIRNY-GMENLRHFLRSHVNMARLFERLVSGDKRFEVV 159 (239)
Q Consensus 81 g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~g~~~~~~~~~~la~~l~~~l~~~~g~~~~ 159 (239)
|+++..+ +........ ....+-....+....++..+ ..+.+++..++..++.+++.+.|++. ++...
T Consensus 240 G~~~~~~-~~~~~~~~~----------~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~ 307 (391)
T 3h14_A 240 GWMVVPE-DQVRVVERI----------AQNMFICAPHASQVAALAALDCDAELQANLDVYKANRKLMLERLPKA-GFTRI 307 (391)
T ss_dssp EEEECCG-GGHHHHHHH----------HHHTTCCCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHH-TCCCB
T ss_pred EEEEeCH-HHHHHHHHH----------HhhhccCCCHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHc-CCCcc
Confidence 7776633 332221100 00000011122222222222 55677888888889999999999886 55443
Q ss_pred cCCCe-eEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhc-CcEEEEEEEE---CCEeEEEEEecC
Q 048438 160 FPCHF-AVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINAS-GKAYMTNVVL---GGIYAIRFATGA 232 (239)
Q Consensus 160 ~~~~~-~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~---~g~~~lR~~~~~ 232 (239)
.++.. ..+.+.++.... + ...+.+.|.++ |....+.... .+..++|+++..
T Consensus 308 ~~~~~~~~~~~~~~~~~~---------------~-------~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~iRis~~~ 363 (391)
T 3h14_A 308 APPDGAFYVYADVSDLTD---------------D-------SRAFAAEILEKAGVAVTPGLDFDPERGAGTLRFSYAR 363 (391)
T ss_dssp CCCCBTTEEEEECTTTCS---------------C-------HHHHHHHHHHHHCEECEEGGGTCTTTGGGEEEEECCS
T ss_pred cCCCeeEEEEEecCccCC---------------C-------HHHHHHHHHHHCCEEEcCchhhCCCCCCCeEEEEecC
Confidence 34443 345555653211 0 12455666655 6554432222 235799999876
No 147
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=99.25 E-value=1.3e-10 Score=99.70 Aligned_cols=191 Identities=9% Similarity=-0.018 Sum_probs=106.8
Q ss_pred cEEEEEecCCCCcccccC----hhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCcccc
Q 048438 5 PLFLCATIGTTAITAVDP----LKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATLDC 80 (239)
Q Consensus 5 p~~vv~t~gtt~~G~i~p----l~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~ 80 (239)
+.+|++....+++|.+.| +++|.++|++||+++|+|.+|++.......+.....++ ..|.++++ |.++++.++
T Consensus 180 ~~~v~~~~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~~~~~~~~-~~d~~t~s--K~~~~G~~~ 256 (395)
T 3nx3_A 180 TCAIILESVQGEGGINPANKDFYKALRKLCDEKDILLIADEIQCGMGRSGKFFAYEHAQI-LPDIMTSA--KALGCGLSV 256 (395)
T ss_dssp EEEEEEESEECTTSCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTC-CCSEEEEC--GGGTTTSCC
T ss_pred eEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCCcCCcchhHHhcCC-CCCEEEec--ccccCCCce
Confidence 466777777788999988 99999999999999999999874311111111012233 27877765 888776778
Q ss_pred eEEEeeCccc-ccccccCCCCccCCCCceecCCCCCChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhC----CCC
Q 048438 81 CCLWATNPEY-LKNKATESKPVVDYKDWQITLSRSFRSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSG----DKR 155 (239)
Q Consensus 81 g~l~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~----~~g 155 (239)
|+++.++ +. ........ ...+. ....+.......+++.+.. ++..++..++.+++++.|.+ .+.
T Consensus 257 G~~~~~~-~~~~~~~~~~~------~~~~~-~~~~~~~~aa~aal~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~ 325 (395)
T 3nx3_A 257 GAFVINQ-KVASNSLEAGD------HGSTY-GGNPLVCAGVNAVFEIFKE---EKILENVNKLTPYLEQSLDELINEFDF 325 (395)
T ss_dssp EEEEECH-HHHHHHSCTTC------CSSCB-SCCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred EEEEEch-hhhhhhcCCcc------cCCCC-CCCHHHHHHHHHHHHHHHh---hHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 8887754 33 22221100 00010 0111111222233433322 23344445566666665543 444
Q ss_pred eEEEcCCCeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhcCcEEEEEEEECCEeEEEEEecCCCC
Q 048438 156 FEVVFPCHFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINASGKAYMTNVVLGGIYAIRFATGATLT 235 (239)
Q Consensus 156 ~~~~~~~~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t 235 (239)
+..+ ++..+++.|.++... + ...+.+.|.++|..+... +..++|+++....|
T Consensus 326 ~~~~-~~~g~~~~~~~~~~~----------------~-------~~~~~~~l~~~Gi~v~~~----~~~~iRi~~~~~~t 377 (395)
T 3nx3_A 326 CKKR-KGLGFMQGLSLDKSV----------------K-------VAKVIQKCQENALLLISC----GENDLRFLPPLILQ 377 (395)
T ss_dssp EEEE-EEETTEEEEEECTTS----------------C-------HHHHHHHHHHTTEECEEE----TTTEEEECCCTTCC
T ss_pred eEEE-EeEEEEEEEEeCCcc----------------h-------HHHHHHHHHHCCCEEecC----CCCEEEEECCCCCC
Confidence 4433 334567778876521 0 125666777777665432 46789999766555
Q ss_pred Cc
Q 048438 236 EE 237 (239)
Q Consensus 236 ~~ 237 (239)
.+
T Consensus 378 ~e 379 (395)
T 3nx3_A 378 KE 379 (395)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 148
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=99.23 E-value=4.9e-10 Score=96.96 Aligned_cols=201 Identities=10% Similarity=0.013 Sum_probs=106.6
Q ss_pred ccEEEEEecCCCCcccccC----hhHHHHHHHHhCCEEEEecccccccccCccc-ccccCCCCCcceEEEcCcccCCCcc
Q 048438 4 IPLFLCATIGTTAITAVDP----LKPLCDVAKQFGIWVHVDAAYAGSACIFPEF-RHFIDGVEGADSFSLNAHKWFFATL 78 (239)
Q Consensus 4 ~p~~vv~t~gtt~~G~i~p----l~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~-~~~~~~~~~~Ds~~~~~hK~l~~P~ 78 (239)
.+.+|+++...+++|.+.| +++|.++|++||+++++|.+|++. ...... .....++ .+|++ +++|++++..
T Consensus 199 ~~~~v~~~p~~~ntG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~-~~~g~~~~~~~~~~-~~di~--s~sK~~~~Gl 274 (426)
T 1sff_A 199 DIAAIVIEPVQGEGGFYASSPAFMQRLRALCDEHGIMLIADEVQSGA-GRTGTLFAMEQMGV-APDLT--TFAKSIAGGF 274 (426)
T ss_dssp GEEEEEECSBCTTTTSCBCCHHHHHHHHHHHHHHTCEEEEECTTTTT-TTTSSSSGGGGTTS-CCSEE--EECGGGGTSS
T ss_pred ceEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhcc-CcccchhhhhhcCC-CCCEE--EEcccccCCC
Confidence 4556666555445998888 999999999999999999999842 111111 0011222 27776 5569987422
Q ss_pred cceEEEeeCcccccccccCCCCccCCCCceecCCCCCChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhC----CC
Q 048438 79 DCCCLWATNPEYLKNKATESKPVVDYKDWQITLSRSFRSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSG----DK 154 (239)
Q Consensus 79 g~g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~----~~ 154 (239)
.+|++++++ +.+...... . .. .+. .........+..+++.+..+ +..++..++.+++.+.|++ .+
T Consensus 275 riG~~~~~~-~~~~~l~~~---~-~~--~~~-~~~~~~~~a~~aal~~~~~~---~~~~~~~~~~~~l~~~l~~~~~~~~ 343 (426)
T 1sff_A 275 PLAGVTGRA-EVMDAVAPG---G-LG--GTY-AGNPIACVAALEVLKVFEQE---NLLQKANDLGQKLKDGLLAIAEKHP 343 (426)
T ss_dssp CCEEEEEEH-HHHTTSCTT---S-BC--CSS-SSCHHHHHHHHHHHHHHHHT---THHHHHHHHHHHHHHHHHHHHHTCT
T ss_pred ceEEEEEcH-HHHhhhccC---C-cC--cCC-CCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 268888753 333322110 0 00 000 00111223333344544332 3445556777777777765 34
Q ss_pred CeEEEcCCCeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhcCcEEEEEEEECCEeEEEEEecCCC
Q 048438 155 RFEVVFPCHFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINASGKAYMTNVVLGGIYAIRFATGATL 234 (239)
Q Consensus 155 g~~~~~~~~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~ 234 (239)
.+..+ ++..+++.+.+.+... ...+. ......+.+.|.++|..+..... ...++|+++....
T Consensus 344 ~~~~~-~~~g~~~~~~~~~~~~------------~~~~~---~~~~~~l~~~l~~~gi~v~~~~~--~~~~iRi~~~~~~ 405 (426)
T 1sff_A 344 EIGDV-RGLGAMIAIELFEDGD------------HNKPD---AKLTAEIVARARDKGLILLSCGP--YYNVLRILVPLTI 405 (426)
T ss_dssp TEEEE-EEETTEEEEEEBGGGC------------TTSBC---HHHHHHHHHHHHHTTEECEEEST--TSCEEEECCCTTC
T ss_pred CeEEE-EEEEEEEEEEEecCcc------------ccCCC---hHHHHHHHHHHHHCCcEEecCCC--CCCEEEEECCccC
Confidence 33332 2346788888853100 00000 11223567777777655443221 2468999976555
Q ss_pred CCc
Q 048438 235 TEE 237 (239)
Q Consensus 235 t~~ 237 (239)
|.+
T Consensus 406 ~~~ 408 (426)
T 1sff_A 406 EDA 408 (426)
T ss_dssp CHH
T ss_pred CHH
Confidence 443
No 149
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=99.23 E-value=2e-10 Score=96.21 Aligned_cols=181 Identities=12% Similarity=0.046 Sum_probs=111.7
Q ss_pred cEEEEEecCCCCcccccChhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCC-CcccceEE
Q 048438 5 PLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFF-ATLDCCCL 83 (239)
Q Consensus 5 p~~vv~t~gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~-~P~g~g~l 83 (239)
+.+|+++..+|.+|.+.|+++|.++|+++++ +++|.+|+........ .......++++.++||+++ ....+|++
T Consensus 136 ~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~-~ivDea~~~~~~~~~~----~~~~~~~~i~~~S~sK~~g~~G~r~G~~ 210 (337)
T 3p1t_A 136 DDCVVLANPSNPTGQALSAGELDQLRQRAGK-LLIDETYVDYSSFRAR----GLAYGENELVFRSFSKSYGLAGLRLGAL 210 (337)
T ss_dssp TEEEEEESSCTTTCCCCCHHHHHHHHHHCSE-EEEECTTGGGSSCSSS----CCCCBTTEEEEEESSSTTCCTTTCCEEE
T ss_pred CCEEEEeCCCCCCCCCCCHHHHHHHHHhCCc-EEEECCChhhcccccc----ccccCCCEEEEeeCchhccCcchheEEE
Confidence 5678888889999999999999999999997 6679999743211110 1112247889999999986 33456777
Q ss_pred EeeCcccccccccCCCCccCCCCceecCCCCCChHHHHHHHHHhC-HHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEcCC
Q 048438 84 WATNPEYLKNKATESKPVVDYKDWQITLSRSFRSLKLWFVIRNYG-MENLRHFLRSHVNMARLFERLVSGDKRFEVVFPC 162 (239)
Q Consensus 84 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g-~~g~~~~~~~~~~la~~l~~~l~~~~g~~~~~~~ 162 (239)
+. +++.+....... ..+ ....+....+...+. .+.++++.++..++.+++.+.|++. |+++. ++
T Consensus 211 ~~-~~~~~~~l~~~~------~~~------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~ 275 (337)
T 3p1t_A 211 FG-PSELIAAMKRKQ------WFC------NVGTLDLHALEAALDNDRAREAHIAKTLAQRRRVADALRGL-GYRVA-SS 275 (337)
T ss_dssp EC-CHHHHHHHHTTS------CTT------CSCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHT-TCCBC-CC
T ss_pred Ee-CHHHHHHHHhhc------CCC------CCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC-cCEEC-CC
Confidence 65 333333221100 000 011222222222232 2346677777888889999999887 77764 55
Q ss_pred CeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhcCcEEEEEEEECCEeEEEEEec
Q 048438 163 HFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINASGKAYMTNVVLGGIYAIRFATG 231 (239)
Q Consensus 163 ~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~ 231 (239)
..+++.|..+.. . .+.+.|.++|.............++|++++
T Consensus 276 ~~~~~~~~~~~~----------------------~----~~~~~l~~~gi~v~~g~~~~~~~~iRis~~ 318 (337)
T 3p1t_A 276 EANFVLVENAAG----------------------E----RTLRFLRERGIQVKDAGQFGLHHHIRISIG 318 (337)
T ss_dssp SSSEEEEECTTT----------------------H----HHHHHHHHTTEECEEGGGGTCCSEEEEECC
T ss_pred CCeEEEEEcCCH----------------------H----HHHHHHHHCCeEEEECccCCCCCeEEEecC
Confidence 667777765431 1 344566666655444333322468999976
No 150
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=99.22 E-value=5.9e-11 Score=101.19 Aligned_cols=192 Identities=14% Similarity=0.063 Sum_probs=112.7
Q ss_pred cEEEEEecCCCCcccccC---hhHHHHHHHHhCCEEEEecccccccccCcccccccC--CCCCcceEEEcCcccCCCc-c
Q 048438 5 PLFLCATIGTTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFID--GVEGADSFSLNAHKWFFAT-L 78 (239)
Q Consensus 5 p~~vv~t~gtt~~G~i~p---l~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~--~~~~~Ds~~~~~hK~l~~P-~ 78 (239)
|-+|+++..+|.+|.+.| +++|+++|++||+++++|.+|+.+.... ....... +....+.++.++||+++.| .
T Consensus 159 ~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~-~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~ 237 (376)
T 2dou_A 159 AKVLLLNYPNNPTGAVADWGYFEEALGLARKHGLWLIHDNPYVDQVYEG-EAPSPLALPGAKERVVELFSLSKSYNLAGF 237 (376)
T ss_dssp EEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSS-CCCCGGGSTTGGGTEEEEEEHHHHHTCGGG
T ss_pred ceEEEECCCCCCcCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCC-CCCChhhcCCCCCcEEEEecchhhcCChhh
Confidence 556777777899999877 6788999999999999999998754321 1101111 1113678889999998644 2
Q ss_pred cceEEEeeCcccccccccCCCCccCCCCceecCCCC-CChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCCCCeE
Q 048438 79 DCCCLWATNPEYLKNKATESKPVVDYKDWQITLSRS-FRSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSGDKRFE 157 (239)
Q Consensus 79 g~g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~ 157 (239)
.+|+++. +++.+....... ..+. .+.. .....+..+++. +.+.+++..++..++.+++.+.|++. ++
T Consensus 238 r~G~~~~-~~~~~~~l~~~~------~~~~--~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~--~~ 305 (376)
T 2dou_A 238 RLGFALG-SEEALARLERVK------GVID--FNQYAGVLRMGVEALKT-PKEVVRGYARVYRERALGMAEALKGV--LS 305 (376)
T ss_dssp CCEEEEE-CHHHHHHHHHHH------HHHC--CCSCHHHHHHHHHHHTS-CHHHHHHHHHHHHHHHHHHHHHHTTT--SE
T ss_pred eeEEEec-CHHHHHHHHHHH------Hhcc--cCCCHHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHHHh--cC
Confidence 3688775 333332221000 0000 0111 111222223332 24566777778889999999999886 67
Q ss_pred EEcCCCeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhcCcEEEEEEEEC--CEeEEEEEecC
Q 048438 158 VVFPCHFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINASGKAYMTNVVLG--GIYAIRFATGA 232 (239)
Q Consensus 158 ~~~~~~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~--g~~~lR~~~~~ 232 (239)
+..+.....+.+.++... + ...+.+.|.++|.......... +..++|+++..
T Consensus 306 ~~~~~~~~~~~~~~~~~~----------------~-------~~~~~~~l~~~gi~v~~g~~f~~~~~~~~Ris~~~ 359 (376)
T 2dou_A 306 LLPPRATMYLWGRLPEGV----------------D-------DLEFGLRLVERGVALAPGRGFGPGGKGFVRIALVR 359 (376)
T ss_dssp ECCCCBSSEEEEECCTTC----------------C-------HHHHHHHHHHTTEECEEGGGGCGGGTTEEEEECCS
T ss_pred ccCCCeeEEEEEECCCCC----------------C-------HHHHHHHHHHCCEEEcCchhhCCCCCCeEEEEecC
Confidence 654333335667775321 0 1256677777765544322221 34689999864
No 151
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=99.22 E-value=1.7e-10 Score=98.79 Aligned_cols=190 Identities=16% Similarity=0.105 Sum_probs=110.1
Q ss_pred cEEEEEecCCCCcccccC---hhHHHHHHHHhCCEEEEecccccccccCcccccccCCCC-CcceEEEcCcccCCCccc-
Q 048438 5 PLFLCATIGTTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVE-GADSFSLNAHKWFFATLD- 79 (239)
Q Consensus 5 p~~vv~t~gtt~~G~i~p---l~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~-~~Ds~~~~~hK~l~~P~g- 79 (239)
+-+|+.+..+|.||.+.| +++|+++|++||+++++|.+|+...... .... +..+. ..++++.+++|+++.| |
T Consensus 165 ~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~-~~~~-~~~~~~~~~i~~~s~SK~~~~~-G~ 241 (385)
T 1b5p_A 165 TKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEG-EHFS-PGRVAPEHTLTVNGAAKAFAMT-GW 241 (385)
T ss_dssp EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSS-CCCC-GGGTCTTTEEEEEESTTTTTCG-GG
T ss_pred CEEEEEeCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEccchhcccCC-CCCC-HHHcCCCCEEEEEechhhcCCc-cc
Confidence 556777788999999866 8999999999999999999998654311 1000 11111 3678899999997644 5
Q ss_pred -ceEEEeeCcccccccccCCCCccCCCCceecCCCCCChHHHHHHHHHh-----CHHHHHHHHHHHHHHHHHHHHHHhCC
Q 048438 80 -CCCLWATNPEYLKNKATESKPVVDYKDWQITLSRSFRSLKLWFVIRNY-----GMENLRHFLRSHVNMARLFERLVSGD 153 (239)
Q Consensus 80 -~g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----g~~g~~~~~~~~~~la~~l~~~l~~~ 153 (239)
+|+++.. ++.+...... ..........+..+.+...+ +.+.+++..++..+..+++.+.|++.
T Consensus 242 RiG~~~~~-~~~~~~l~~~----------~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 310 (385)
T 1b5p_A 242 RIGYACGP-KEVIKAMASV----------SRQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTAL 310 (385)
T ss_dssp CCEEEECC-HHHHHHHHHH----------HHTTTCSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEeC-HHHHHHHHHH----------HhhccCCCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 7888763 3333222100 00000011122222222222 23446667777788888999999887
Q ss_pred CCeEEEcCCCeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhcCcEEEEEEEECCEeEEEEEec
Q 048438 154 KRFEVVFPCHFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINASGKAYMTNVVLGGIYAIRFATG 231 (239)
Q Consensus 154 ~g~~~~~~~~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~ 231 (239)
|+++..+.....+...++..+. + ...+.+.|.++|..+..........++|+++.
T Consensus 311 -g~~~~~~~~~~~~~~~~~~~~~---------------~-------~~~l~~~l~~~gv~v~~g~~f~~~~~iRis~~ 365 (385)
T 1b5p_A 311 -GLKAVRPSGAFYVLMDTSPIAP---------------D-------EVRAAERLLEAGVAVVPGTDFAAFGHVRLSYA 365 (385)
T ss_dssp -TCCBCCCSBTTEEEEECTTTCS---------------S-------HHHHHHHHHHTTEECEESGGGTCTTEEEEECC
T ss_pred -CCeecCCCeeEEEEEecCCCCC---------------C-------HHHHHHHHHHCCeEEecccccCCCCeEEEEec
Confidence 8776543332334445532111 0 12566677766665544332221358999976
No 152
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=99.21 E-value=5.4e-11 Score=102.71 Aligned_cols=192 Identities=8% Similarity=0.003 Sum_probs=112.6
Q ss_pred cEEEEEecCCCCcccccC---hhHHHHHHHHhCCEEEEecccccccccCcccccccC--CCCCcceEEEcCcccCCCc-c
Q 048438 5 PLFLCATIGTTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFID--GVEGADSFSLNAHKWFFAT-L 78 (239)
Q Consensus 5 p~~vv~t~gtt~~G~i~p---l~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~--~~~~~Ds~~~~~hK~l~~P-~ 78 (239)
+-+|+++..+|.+|.+.| +++|+++|+++|+++++|.+|+.+.... ....... +....|+++.++||+++.| .
T Consensus 182 ~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g-~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~ 260 (404)
T 2o1b_A 182 TKLIYLTYPNNPTGSTATKEVFDEAIAKFKGTDTKIVHDFAYGAFGFDA-KNPSILASENGKDVAIEIYSLSKGYNMSGF 260 (404)
T ss_dssp EEEEEECSSCTTTCCCCCHHHHHHHHHHHTTSSCEEEEECTTTTCBSSS-CCCCGGGSTTHHHHEEEEEESTTTTTCGGG
T ss_pred ceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCC-CCCChhhcCCCCCCEEEEEecchhccCchh
Confidence 456667777888999876 7889999999999999999998754311 1111111 1113678899999998644 2
Q ss_pred cceEEEeeCcccccccccCCCCccCCCCceecCCCC-CChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCCCCeE
Q 048438 79 DCCCLWATNPEYLKNKATESKPVVDYKDWQITLSRS-FRSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSGDKRFE 157 (239)
Q Consensus 79 g~g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~ 157 (239)
.+|+++. +++.+....... ..+. .+.. .....+..+++. +.+.+++..++..++.+++.+.|++. |++
T Consensus 261 r~G~~~~-~~~~~~~l~~~~------~~~~--~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~ 329 (404)
T 2o1b_A 261 RVGFAVG-NKDMIQALKKYQ------THTN--AGMFGALQDAAIYALNH-YDDFLEEQSNVFKTRRDRFEAMLAKA-DLP 329 (404)
T ss_dssp CCEEEEE-CHHHHHHHHHHH------HHHC--CCCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHT-TCC
T ss_pred heEeEec-CHHHHHHHHHHH------hhcc--CCCCHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHHHHhc-CCe
Confidence 4688776 344333221100 0000 0111 111222223333 34566777777888999999999987 887
Q ss_pred EEcCCCee-EEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHh-cCcEEEEEEEEC--CEeEEEEEecC
Q 048438 158 VVFPCHFA-VVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINA-SGKAYMTNVVLG--GIYAIRFATGA 232 (239)
Q Consensus 158 ~~~~~~~~-iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~--g~~~lR~~~~~ 232 (239)
+.. ++.+ .+.+.++.. . + ...+.++|.+ .|..+....... +..++|+++..
T Consensus 330 ~~~-~~~g~~~~~~~~~~-~---------------~-------~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~~ 384 (404)
T 2o1b_A 330 FVH-AKGGIYVWLETPPG-Y---------------D-------SEQFEQFLVQEKSILVAPGKPFGENGNRYVRISLAL 384 (404)
T ss_dssp EEC-CCBSSEEEEECCTT-C---------------C-------HHHHHHHHHHHHCEECEESGGGCGGGTTEEEEECCS
T ss_pred ecC-CCcceEEEEeCCCC-C---------------C-------HHHHHHHHHHHCCEEEeCchhhCcCCCCeEEEEEcC
Confidence 764 4445 466676531 1 0 1245566653 465544322221 34689999875
No 153
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=99.21 E-value=5.2e-11 Score=104.04 Aligned_cols=199 Identities=12% Similarity=0.020 Sum_probs=116.3
Q ss_pred cEEEEEecCCCCcccccC---hhHHHHHHHHhCCEEEEecccccccccCcccccc--cCCCCCcceEEEcCcccCC-Ccc
Q 048438 5 PLFLCATIGTTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHF--IDGVEGADSFSLNAHKWFF-ATL 78 (239)
Q Consensus 5 p~~vv~t~gtt~~G~i~p---l~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~--~~~~~~~Ds~~~~~hK~l~-~P~ 78 (239)
+-+|+++..+|.+|.+.| +++|+++|++||+++++|.+|+.....-...... +......++++.+++|+++ ...
T Consensus 210 ~~~v~l~~p~NPtG~~~~~~~l~~l~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~ 289 (449)
T 3qgu_A 210 TDIIFFCSPNNPTGAAATRAQLTELVNFARKNGSILVYDAAYALYISNPDCPKTIYEIPGADEVAIETCSFSKYAGFTGV 289 (449)
T ss_dssp CSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECSGGGTCTTC
T ss_pred CCEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchHhhhcCCCCCCCHhhccCCCCcEEEEecchhhcCCccc
Confidence 345666678899999876 7888888999999999999998754321100000 1111236788999999986 334
Q ss_pred cceEEEeeCcccccccccCCCCccC-CCCceecCCCCCChHHHHHHHHHhC---HHHHHHHHHHHHHHHHHHHHHHhCCC
Q 048438 79 DCCCLWATNPEYLKNKATESKPVVD-YKDWQITLSRSFRSLKLWFVIRNYG---MENLRHFLRSHVNMARLFERLVSGDK 154 (239)
Q Consensus 79 g~g~l~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~g---~~g~~~~~~~~~~la~~l~~~l~~~~ 154 (239)
.+|+++..+ +.+..... .... ..............+...++...+. .+.+++..++..++.+++.+.|++.
T Consensus 290 r~G~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~- 364 (449)
T 3qgu_A 290 RLGWTVVPK-ALKYANGE---PVHADWNRVMTTCFNGASNIVQAGGLACLQPEGLKEMNAMIKFYKENAQILKTTFTEM- 364 (449)
T ss_dssp CCEEEECCT-TCBCTTSC---BHHHHHHHHHHHSCCCCCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHT-
T ss_pred eeEEEecCH-HHHhhhhh---hHHHHHHHHhhcccCCCCHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHC-
Confidence 578877643 33321000 0000 0000000000112233333333333 3456777888889999999999987
Q ss_pred CeEEEcCCCeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhc-CcEEEEEEE--ECCEeEEEEEec
Q 048438 155 RFEVVFPCHFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINAS-GKAYMTNVV--LGGIYAIRFATG 231 (239)
Q Consensus 155 g~~~~~~~~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~--~~g~~~lR~~~~ 231 (239)
|+++..+...+.+.+.+++.. ...+.+.|.++ |.++.+... ..+..++|+++.
T Consensus 365 g~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~l~~~~gI~v~pg~~f~~~~~~~iRis~~ 420 (449)
T 3qgu_A 365 GFSVYGGDDAPYIWVGFPGKP------------------------SWDVFAEILERCNIVTTPGSGYGPAGEGFVRASAF 420 (449)
T ss_dssp TCCEEESSSSSEEEEECTTSC------------------------HHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECC
T ss_pred CCeeeCCCCeeEEEEECCCCC------------------------HHHHHHHHHHHCCEEEecchHhCCCCCCeEEEEec
Confidence 888876655777777776211 12455566665 554443222 124578999964
Q ss_pred C
Q 048438 232 A 232 (239)
Q Consensus 232 ~ 232 (239)
.
T Consensus 421 ~ 421 (449)
T 3qgu_A 421 G 421 (449)
T ss_dssp S
T ss_pred C
Confidence 4
No 154
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=99.21 E-value=4.6e-11 Score=103.20 Aligned_cols=197 Identities=13% Similarity=0.089 Sum_probs=112.0
Q ss_pred cEEEEEecCCCCcccccC---hhHHHHHHHHhCCEEEEecccccccccCcccccc--cCCCCCcceEEEcCcccCCCc-c
Q 048438 5 PLFLCATIGTTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHF--IDGVEGADSFSLNAHKWFFAT-L 78 (239)
Q Consensus 5 p~~vv~t~gtt~~G~i~p---l~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~--~~~~~~~Ds~~~~~hK~l~~P-~ 78 (239)
+-+|+++..+|.+|.+.| +++|+++|++||+++++|.+|+.+.......... +.+....|+++.++||+++.| .
T Consensus 173 ~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~ 252 (412)
T 2x5d_A 173 PRMMILGFPSNPTAQCVELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQVPGAKDIAVEFFTLSKSYNMAGW 252 (412)
T ss_dssp CSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTGGGTEEEEEECC-CCSCTTS
T ss_pred ceEEEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCChhhccCccCcEEEEecCccccCCccc
Confidence 345566777889999876 6889999999999999999998765421111110 111124789999999998633 2
Q ss_pred cceEEEeeCcccccccccCCCCccCCCCceecCCCCCChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCCCCeEE
Q 048438 79 DCCCLWATNPEYLKNKATESKPVVDYKDWQITLSRSFRSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSGDKRFEV 158 (239)
Q Consensus 79 g~g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~~ 158 (239)
.+|+++++ ++.+...... .....++ ........+..+++. +.+.+++..++..++.+++.+.|++. |+++
T Consensus 253 r~G~~~~~-~~~~~~l~~~----~~~~~~~---~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~ 322 (412)
T 2x5d_A 253 RIGFMVGN-PELVSALARI----KSYHDYG---TFTPLQVAAIAALEG-DQQCVRDIARQYQQRRDVLVKGLREA-GWMV 322 (412)
T ss_dssp CCEEEEEC-HHHHHHHHHH----HHHHCCC---CCHHHHHHHHHHHHS-CSHHHHHHHHHHHHHHHHHHHHHHHH-TCCC
T ss_pred ceEEEEcC-HHHHHHHHHH----HhhhccC---CCHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHHHHHHHHHHC-CCEe
Confidence 36888873 3433222110 0000000 001111222223332 23456777778888999999999886 7776
Q ss_pred EcCCCee-EEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHh-cCcEEEEEEEE--CCEeEEEEEecC
Q 048438 159 VFPCHFA-VVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINA-SGKAYMTNVVL--GGIYAIRFATGA 232 (239)
Q Consensus 159 ~~~~~~~-iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~--~g~~~lR~~~~~ 232 (239)
+ ++..+ ++.+.++.. . .. .-...+.+.|.+ .|..+...... .+..++|+++..
T Consensus 323 ~-~~~~g~~~~~~~~~~-~--------------~~-----~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~~ 379 (412)
T 2x5d_A 323 E-NPKASMYVWAKIPEP-Y--------------AH-----LGSLEFAKKLLQDAKVSVSPGIGFGDYGDDHVRFALIE 379 (412)
T ss_dssp C-CCSBSSEEEEECCTT-T--------------GG-----GCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCS
T ss_pred c-CCCeeeEEEEEcCCc-c--------------CC-----CCHHHHHHHHHHHCCEEEeCchhhCCCCCCeEEEEecC
Confidence 5 44444 566676431 0 00 001256666654 46554433222 134689999875
No 155
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=99.21 E-value=2.6e-10 Score=99.04 Aligned_cols=193 Identities=10% Similarity=-0.039 Sum_probs=108.8
Q ss_pred ccEEEEEecC-CCCcccccC----hhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCc-
Q 048438 4 IPLFLCATIG-TTAITAVDP----LKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFAT- 77 (239)
Q Consensus 4 ~p~~vv~t~g-tt~~G~i~p----l~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P- 77 (239)
.+.+|+++.. ++.+|.+.| +++|.++|++||+++|+|.+|++.......+.....++ ..|+++++ |+++++
T Consensus 204 ~~~~vi~~p~~~n~tG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~g~~g~~~~~~~~~~-~~d~~t~s--K~l~~G~ 280 (429)
T 1s0a_A 204 EIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGKLFACEHAEI-APDILCLG--KALTGGT 280 (429)
T ss_dssp TEEEEEECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTC-CCSEEEEC--GGGGTSS
T ss_pred CEEEEEEeecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCcccchHHHhhhcCC-CCCEEEec--ccccCCC
Confidence 3456767766 788998887 99999999999999999999974211110000001233 37887665 998877
Q ss_pred ccceEEEeeCcccccccccCCCCccCCCCceecCCCCCChHH---HHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCC-
Q 048438 78 LDCCCLWATNPEYLKNKATESKPVVDYKDWQITLSRSFRSLK---LWFVIRNYGMENLRHFLRSHVNMARLFERLVSGD- 153 (239)
Q Consensus 78 ~g~g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~- 153 (239)
.++|++++++ +.+......... .+.....-....+. ...+++.+..+ +..++..++.+++.+.|+++
T Consensus 281 ~~iG~~~~~~-~~~~~l~~~~~~-----~~~~~~t~~~n~~~~~a~~aal~~~~~~---~~~~~~~~~~~~l~~~L~~l~ 351 (429)
T 1s0a_A 281 MTLSATLTTR-EVAETISNGEAG-----CFMHGPTFMGNPLACAAANASLAILESG---DWQQQVADIEVQLREQLAPAR 351 (429)
T ss_dssp SCCEEEEECH-HHHHHHHTSTTS-----SCSCCCTTTTCHHHHHHHHHHHHHHHTC---HHHHHHHHHHHHHHHHHGGGG
T ss_pred ccceEEEeCH-HHHHHhhcCCCc-----ccccCCCCCCCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHh
Confidence 7889988753 433322110000 00000000112222 23344433222 34556668888999998774
Q ss_pred --CCeEEEcCCCeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhcCcEEEEEEEECCEeEEEEEec
Q 048438 154 --KRFEVVFPCHFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINASGKAYMTNVVLGGIYAIRFATG 231 (239)
Q Consensus 154 --~g~~~~~~~~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~ 231 (239)
+++..+ ++..+++.+.++... + ...+.+.|.++|.... + . + .++|++++
T Consensus 352 ~~~~~~~~-~~~g~~~~~~~~~~~----------------~-------~~~l~~~l~~~Gi~v~-~--~-~-~~iRis~~ 402 (429)
T 1s0a_A 352 DAEMVADV-RVLGAIGVVETTHPV----------------N-------MAALQKFFVEQGVWIR-P--F-G-KLIYLMPP 402 (429)
T ss_dssp GCTTEEEE-EEETTEEEEEESSCB----------------C-------HHHHHHHHHHTTEECC-C--B-T-TEEEECCC
T ss_pred cCCCEEEE-EEeeEEEEEEECCcc----------------c-------HHHHHHHHHHCCCEEe-c--c-C-CEEEEECC
Confidence 565433 233457777775421 0 1245666766665433 2 1 2 58999976
Q ss_pred CCCCCc
Q 048438 232 ATLTEE 237 (239)
Q Consensus 232 ~~~t~~ 237 (239)
...|++
T Consensus 403 ~~~t~e 408 (429)
T 1s0a_A 403 YIILPQ 408 (429)
T ss_dssp TTCCHH
T ss_pred CCCCHH
Confidence 666554
No 156
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=99.20 E-value=1.5e-10 Score=101.01 Aligned_cols=151 Identities=15% Similarity=0.054 Sum_probs=94.3
Q ss_pred ccEEEEEec----CCCCcccccChhHHHHHHHH--hCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCC-
Q 048438 4 IPLFLCATI----GTTAITAVDPLKPLCDVAKQ--FGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFA- 76 (239)
Q Consensus 4 ~p~~vv~t~----gtt~~G~i~pl~~i~~i~~~--~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~- 76 (239)
.+-+|++.. .++.+|.+.|+++|+++|++ +|++++||.+|+.+...... ..+ ++|+++.++||++++
T Consensus 165 ~tk~V~i~~sp~np~~~~~~~~~l~~i~~la~~~~~~~~livDea~~~~~~~~~~-----~~~-g~Di~~~S~sK~lgg~ 238 (431)
T 3ht4_A 165 NTKMIGIQRSKGYATRPSFTISQIKEMIAFVKEIKPDVVVFVDNCYGEFIEEQEP-----CHV-GADLMAGSLIKNPGGG 238 (431)
T ss_dssp TEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCTTSSSCCG-----GGT-TCSEEEEETTSGGGTT
T ss_pred CCeEEEEECCCCCCCCCcCCHHHHHHHHHHHHhhCCCCEEEEeCCChhhccCCCc-----ccc-CCeEEEcCccccCCCC
Confidence 356677776 67889999999999999999 99999999999887543221 112 389999999999766
Q ss_pred --cccceEEEeeCcccccccccCCCCccCCCCceecCCCCCChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 048438 77 --TLDCCCLWATNPEYLKNKATESKPVVDYKDWQITLSRSFRSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSGDK 154 (239)
Q Consensus 77 --P~g~g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~ 154 (239)
|.| |+++.+ ++.+....... .. .......+..+... +.+++ +......++++..++++++.+.|++.
T Consensus 239 ~~~~G-G~v~~~-~~li~~l~~~~-~~---~~~g~~~~~~~~~~--~~~~~--~l~~~~~~~~~~~~~a~~l~~~L~~~- 307 (431)
T 3ht4_A 239 IVKTG-GYIVGK-EQYVEACAYRL-TS---PGIGAEAGASLYSL--QEMYQ--GFFLAPHVAGQALKGAIFTAAFLEKL- 307 (431)
T ss_dssp TCSSC-EEEEEC-HHHHHHHHHHH-SC---TTTTTSCSCCCSCS--HHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHH-
T ss_pred CCCce-EEEEec-HHHHHHHHHHh-cc---CCcccccCccHHHH--HHHHh--HhhhHHHHHHHHHHHHHHHHHHHHhC-
Confidence 666 777664 44332221100 00 00000111111111 11222 22344667788889999999999886
Q ss_pred CeEEEcCCCee-----EEEEEEc
Q 048438 155 RFEVVFPCHFA-----VVCFRVS 172 (239)
Q Consensus 155 g~~~~~~~~~~-----iv~f~~~ 172 (239)
|+++. |.... |++|.++
T Consensus 308 g~~v~-p~~~~~~~~li~~i~l~ 329 (431)
T 3ht4_A 308 GMNTS-PAWNAPRTDLIQSVQFD 329 (431)
T ss_dssp TCCEE-SCTTSCCSSSCCEEECC
T ss_pred cCEec-CCCCCCCccEEEEEEeC
Confidence 67764 32333 7778775
No 157
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=99.20 E-value=7.4e-11 Score=101.36 Aligned_cols=189 Identities=11% Similarity=-0.045 Sum_probs=108.5
Q ss_pred ccEEEEEecCCCCccc----ccChhHHHHHHHHhCCEEEEecccccccccCccccc-ccCCCCCcceEEEcCcccCCCcc
Q 048438 4 IPLFLCATIGTTAITA----VDPLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRH-FIDGVEGADSFSLNAHKWFFATL 78 (239)
Q Consensus 4 ~p~~vv~t~gtt~~G~----i~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~-~~~~~~~~Ds~~~~~hK~l~~P~ 78 (239)
.+.+|+++..++.+|. .+++++|+++|++||+++++|++|++. ......-. ...+. .+|++++ +|+++++.
T Consensus 183 ~~~~v~~~~~~nptG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~-~~~g~~~~~~~~~~-~~d~~s~--sK~~~~G~ 258 (397)
T 2ord_A 183 DVCAVFLEPIQGESGIVPATKEFLEEARKLCDEYDALLVFDEVQCGM-GRTGKLFAYQKYGV-VPDVLTT--AKGLGGGV 258 (397)
T ss_dssp TEEEEEECSEECTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTTTT-TTTSSSSHHHHHTC-CCSEEEE--CGGGGTTS
T ss_pred CeEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCC-ccCccchhhhhhCC-CCCeeee--ccccCCCc
Confidence 3567888888899999 478999999999999999999999732 21111100 01122 2787755 79998766
Q ss_pred cceEEEeeCcccccccccCCCCccCCCCceecCCCCCChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCC----C
Q 048438 79 DCCCLWATNPEYLKNKATESKPVVDYKDWQITLSRSFRSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSGD----K 154 (239)
Q Consensus 79 g~g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~----~ 154 (239)
.+|++++++. .. ..... ... .+. ............+++.+.. ++..++..++++++.+.|++. +
T Consensus 259 r~G~~~~~~~-~~-~l~~~----~~~--~~~-~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~ 326 (397)
T 2ord_A 259 PIGAVIVNER-AN-VLEPG----DHG--TTF-GGNPLACRAGVTVIKELTK---EGFLEEVEEKGNYLMKKLQEMKEEYD 326 (397)
T ss_dssp CCEEEEECST-TC-CCCTT----SSC--CSS-TTCHHHHHHHHHHHHHHTS---TTHHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred CeEEEEEchH-hc-ccCCC----CcC--CCC-CCCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 7899887543 33 22110 000 000 0011112223334444433 345556667888888888653 2
Q ss_pred CeEEEcCCCeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhcCcEEEEEEEECCEeEEEEEecCCC
Q 048438 155 RFEVVFPCHFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINASGKAYMTNVVLGGIYAIRFATGATL 234 (239)
Q Consensus 155 g~~~~~~~~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~ 234 (239)
.+... ++..+++.|.++... ....+.+.|.++|...... +..++|+++....
T Consensus 327 ~~~~~-~~~g~~~~~~~~~~~-----------------------~~~~l~~~l~~~gi~v~~~----~~~~iRis~~~~~ 378 (397)
T 2ord_A 327 VVADV-RGMGLMIGIQFREEV-----------------------SNREVATKCFENKLLVVPA----GNNTIRFLPPLTV 378 (397)
T ss_dssp TEEEE-EEETTEEEEEECTTS-----------------------CHHHHHHHHHHTTEECEEE----TTTEEEECCCTTC
T ss_pred ceEEE-EEEeEEEEEEECChH-----------------------HHHHHHHHHHHCCCEEccC----CCCEEEEECCcCC
Confidence 22211 334567888876421 0125666776666554432 3568999975444
Q ss_pred CC
Q 048438 235 TE 236 (239)
Q Consensus 235 t~ 236 (239)
|.
T Consensus 379 ~~ 380 (397)
T 2ord_A 379 EY 380 (397)
T ss_dssp CH
T ss_pred CH
Confidence 43
No 158
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=99.20 E-value=4.6e-10 Score=97.48 Aligned_cols=193 Identities=10% Similarity=-0.011 Sum_probs=112.0
Q ss_pred ccEEEEEecCCCCcccccC---hhHHHHHHHH-----hCCEEEEecccccccccCccccc---ccCCCCCc---ceEEEc
Q 048438 4 IPLFLCATIGTTAITAVDP---LKPLCDVAKQ-----FGIWVHVDAAYAGSACIFPEFRH---FIDGVEGA---DSFSLN 69 (239)
Q Consensus 4 ~p~~vv~t~gtt~~G~i~p---l~~i~~i~~~-----~gi~lhvD~A~~~~~~~~~~~~~---~~~~~~~~---Ds~~~~ 69 (239)
.+.+|+++..+|.+|.+.| +++|+++|++ ||+++++|.+|+........... .+.+.... ++++.+
T Consensus 189 ~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s 268 (430)
T 2x5f_A 189 DKVIMILNYPNNPTGYTPTHKEVTTIVEAIKALANKGTKVIAVVDDAYYGLFYEDVYTQSLFTALTNLHSNAILPIRLDG 268 (430)
T ss_dssp SEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTTTCBCSSSCCSCHHHHHHTTCCTTEEEEEEEE
T ss_pred CCEEEEEcCCCCCCCCcCCHHHHHHHHHHHHhhhhccCCEEEEEehhcccccCCcccchHHHHHHhhccCCcceEEEEEe
Confidence 5667777888999999999 8999999999 99999999999865432110111 12121224 677899
Q ss_pred CcccCCCc-ccceEEEe--eCcccccccccCCCCccCCCCceecCCCCCChHHHHHHHHHhC-----HHHHHHHHHHHHH
Q 048438 70 AHKWFFAT-LDCCCLWA--TNPEYLKNKATESKPVVDYKDWQITLSRSFRSLKLWFVIRNYG-----MENLRHFLRSHVN 141 (239)
Q Consensus 70 ~hK~l~~P-~g~g~l~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g-----~~g~~~~~~~~~~ 141 (239)
+||+++.| ..+|++++ .+++.+....... .. ......-....+..+.+...+. .+.+++..++..+
T Consensus 269 ~sK~~~~~G~riG~~~~~~~~~~~~~~l~~~~----~~--~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~ 342 (430)
T 2x5f_A 269 ATKEFFAWGFRVGFMTFGTSDQTTKEVLEAKV----KG--LIRSNISSGPLPTQSAVKHVLKNNKQFDKEIEQNIQTLKE 342 (430)
T ss_dssp HHHHTTCGGGCCEEEEEBCCCHHHHHHHHHHH----HH--HHHTTTSSCCHHHHHHHHHHHHSCHHHHHHHHHHHHHHHH
T ss_pred cccCCCCCCCCeEEEEEecCCHHHHHHHHHHH----hh--hhhcccCCCChHHHHHHHHHHccChHHHHHHHHHHHHHHH
Confidence 99998644 22688887 2333332221000 00 0000000011222222222221 1233446677778
Q ss_pred HHHHHHHHHh----CCCCeEEEcCCCee-EEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHh-cCcEEE
Q 048438 142 MARLFERLVS----GDKRFEVVFPCHFA-VVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINA-SGKAYM 215 (239)
Q Consensus 142 la~~l~~~l~----~~~g~~~~~~~~~~-iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~ 215 (239)
+.+++.+.|+ +. |+++.. +..+ .+.+.+++.. ...+.+.|.+ +|..+.
T Consensus 343 ~~~~l~~~L~~~~~~~-g~~~~~-~~~g~~~~~~~~~~~------------------------~~~~~~~l~~~~gi~v~ 396 (430)
T 2x5f_A 343 RYEVTKEVVYADQYHS-HWQAYD-FNSGYFMAIKVHDVD------------------------PEALRKHLIDKYSIGVI 396 (430)
T ss_dssp HHHHHHHHHTCGGGTT-TEEECC-CCBSSEEEEEESSSC------------------------HHHHHHHHHHHHCEECE
T ss_pred HHHHHHHHHHhhCCCC-CceeeC-CCceEEEEeCCCCCC------------------------HHHHHHHHHHhCCEEEe
Confidence 8899999998 54 788764 4444 4777776211 1256667776 565544
Q ss_pred EEEEECCEeEEEEEecC
Q 048438 216 TNVVLGGIYAIRFATGA 232 (239)
Q Consensus 216 ~~~~~~g~~~lR~~~~~ 232 (239)
.. +..++|+++..
T Consensus 397 ~g----~~~~iRis~~~ 409 (430)
T 2x5f_A 397 AL----NATDIRIAFSC 409 (430)
T ss_dssp EC----SSSEEEEEGGG
T ss_pred cC----CCCeEEEEEec
Confidence 32 45689999884
No 159
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=99.19 E-value=8.2e-11 Score=102.97 Aligned_cols=158 Identities=13% Similarity=0.090 Sum_probs=88.3
Q ss_pred EEEEEecCCC-CcccccC---hhHHHHHHHHhCCEEEEeccccccc--------ccCccccc--c--cCCCCCcceEEEc
Q 048438 6 LFLCATIGTT-AITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSA--------CIFPEFRH--F--IDGVEGADSFSLN 69 (239)
Q Consensus 6 ~~vv~t~gtt-~~G~i~p---l~~i~~i~~~~gi~lhvD~A~~~~~--------~~~~~~~~--~--~~~~~~~Ds~~~~ 69 (239)
.+|+++..++ .+|.+.| +++|+++|++||+++|+|++|+.|. ........ . ..+ ...|+++++
T Consensus 176 ~~v~l~~p~n~ptG~~~~~~~l~~i~~la~~~~i~li~De~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~-~~~d~~~~S 254 (456)
T 2ez2_A 176 AYICLAVTVNLAGGQPVSMANMRAVRELTEAHGIKVFYDATRCVENAYFIKEQEQGFENKSIAEIVHEMF-SYADGCTMS 254 (456)
T ss_dssp EEEEEESSBTTTTSBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHSTTCTTSCHHHHHHHHH-TTCSEEEEE
T ss_pred eEEEEeccCCCCCCccCCHHHHHHHHHHHHHcCCeEEEEccccccccccccccccccCCcchhhhhhhhc-ccCCEEEEe
Confidence 5566665555 8998877 9999999999999999999998751 11111000 0 001 137999999
Q ss_pred CcccCCCcccceEEEeeCcccccccccCCCCccCCCCceecCCCCCChHHHHHHHHHhCHHHH-HHHHHHHHHHHHHHHH
Q 048438 70 AHKWFFATLDCCCLWATNPEYLKNKATESKPVVDYKDWQITLSRSFRSLKLWFVIRNYGMENL-RHFLRSHVNMARLFER 148 (239)
Q Consensus 70 ~hK~l~~P~g~g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~g~-~~~~~~~~~la~~l~~ 148 (239)
+||+++.| ..|+++.++++.............. +....+.....+.. .++..+ +.+ ++..++..++.+++.+
T Consensus 255 ~kk~~~~~-~gG~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~a-~a~~~~--~~~~~~~~~~~~~~~~~l~~ 327 (456)
T 2ez2_A 255 GKKDCLVN-IGGFLCMNDDEMFSSAKELVVVYEG---MPSYGGLAGRDMEA-MAIGLR--EAMQYEYIEHRVKQVRYLGD 327 (456)
T ss_dssp TTTTTCCS-SCEEEEESCHHHHHHHHHHHHHHTC---CTTTTTCCHHHHHH-HHHHHH--HHTCHHHHHHHHHHHHHHHH
T ss_pred CcccCCCC-ceeEEEECCHHHHHHHHHHHhhccC---cccccCcchhHHHH-HHHHHH--HHhHHHHHHHHHHHHHHHHH
Confidence 99997755 3576666444433221100000000 00011111111111 011111 222 3556666788899999
Q ss_pred HHhCCCCeEEEcCCCeeEEEEEEc
Q 048438 149 LVSGDKRFEVVFPCHFAVVCFRVS 172 (239)
Q Consensus 149 ~l~~~~g~~~~~~~~~~iv~f~~~ 172 (239)
.|++. |++++.+...+.+.+.+.
T Consensus 328 ~L~~~-g~~~~~p~~~~~~~~~~~ 350 (456)
T 2ez2_A 328 KLKAA-GVPIVEPVGGHAVFLDAR 350 (456)
T ss_dssp HHHHT-TCCBCSSCCSSEEEEEHH
T ss_pred HHhcC-CCccccCCCceEEEEEhH
Confidence 99885 887766655666666653
No 160
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=99.19 E-value=1.6e-10 Score=101.20 Aligned_cols=196 Identities=10% Similarity=0.056 Sum_probs=114.9
Q ss_pred ccEEE-EEecCCCCcccccC---hhHHHHHHHHhCCEEEEecccccccccCcccccccCCC--CCcceEEEcCcccCCCc
Q 048438 4 IPLFL-CATIGTTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGV--EGADSFSLNAHKWFFAT 77 (239)
Q Consensus 4 ~p~~v-v~t~gtt~~G~i~p---l~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~--~~~Ds~~~~~hK~l~~P 77 (239)
.|-+| +....+|.+|.+.| +++|.++|++||+++++|.+|+.+......... +..+ ...+.+..+++|+++ |
T Consensus 216 ~~k~v~~~~~~~NPtG~~~~~~~l~~i~~la~~~~~~lI~De~y~~~~~~g~~~~~-~~~~~~~~~vi~~~S~SK~~~-~ 293 (448)
T 3aow_A 216 KVKVVYTVPTFQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKK-IKALDNEGRVIYLGTFSKILA-P 293 (448)
T ss_dssp CEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECSCTTCBCSSCCCCC-TGGGCTTSCEEEEEESTTTTC-G
T ss_pred CCeEEEECCCCCCCcCCCCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcC-HHhcCCCCCEEEEccchhhcc-c
Confidence 45555 55677899999877 568999999999999999999876432111100 1111 135678899999987 4
Q ss_pred cc--ceEEEeeCcccccccccCCCCccCCCCceecCCCCCChHHHHHHHHHhC-HHHHHHHHHHHHHHHHHHHHHHhC-C
Q 048438 78 LD--CCCLWATNPEYLKNKATESKPVVDYKDWQITLSRSFRSLKLWFVIRNYG-MENLRHFLRSHVNMARLFERLVSG-D 153 (239)
Q Consensus 78 ~g--~g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g-~~g~~~~~~~~~~la~~l~~~l~~-~ 153 (239)
| +|+++.. ++.+....... ..+.. +...+....+..+++..+ .+.+++..++..++.+++.+.|++ .
T Consensus 294 -GlriG~v~~~-~~l~~~l~~~~------~~~~~-~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 364 (448)
T 3aow_A 294 -GFRIGWMVGD-PGIIRKMEIAK------QSTDL-CTNVFGQVVAWRYVDGGYLEKHIPEIRKFYKPRRDAMLEALEEFM 364 (448)
T ss_dssp -GGCCEEEEEC-HHHHHHHHHHH------HHHHS-SCCHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred -cccEEEEEeC-HHHHHHHHHHH------HHhcC-CCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 4 7888874 33333221000 00000 010111122222333211 234555666666888889999986 5
Q ss_pred C-CeEEEcCCCeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhcCcEEEEEEEE----CCEeEEEE
Q 048438 154 K-RFEVVFPCHFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINASGKAYMTNVVL----GGIYAIRF 228 (239)
Q Consensus 154 ~-g~~~~~~~~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~----~g~~~lR~ 228 (239)
| ++++..+...+.+.++++... + ...+.++|.++|..+...... .+..++|+
T Consensus 365 ~~g~~~~~p~~g~~~~v~~~~~~----------------~-------~~~l~~~l~~~gV~v~pg~~f~~~~~~~~~iRl 421 (448)
T 3aow_A 365 PEGVKWTKPEGGMFIWVTLPDGI----------------D-------SKKMLERAIKKGVAYVPGEAFYAHRDVKNTMRL 421 (448)
T ss_dssp CTTCEECCCSBSSEEEEECSTTC----------------C-------HHHHHHHHHHTTEECEEGGGGSTTCCCCSEEEE
T ss_pred CCCeEEeCCCccEEEEEEcCCCC----------------C-------HHHHHHHHHHCCcEEEcchhhcCCCCCCCEEEE
Confidence 6 688765555567777775311 0 125667777776655543322 24578999
Q ss_pred EecCC
Q 048438 229 ATGAT 233 (239)
Q Consensus 229 ~~~~~ 233 (239)
++...
T Consensus 422 s~~~~ 426 (448)
T 3aow_A 422 NFTYV 426 (448)
T ss_dssp ECSSS
T ss_pred EeCCC
Confidence 98764
No 161
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=99.19 E-value=8.3e-11 Score=99.31 Aligned_cols=188 Identities=12% Similarity=-0.006 Sum_probs=113.7
Q ss_pred cEEEEEecCCCCcccccChhHHHHHHHHhC-CEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCc-ccceE
Q 048438 5 PLFLCATIGTTAITAVDPLKPLCDVAKQFG-IWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFAT-LDCCC 82 (239)
Q Consensus 5 p~~vv~t~gtt~~G~i~pl~~i~~i~~~~g-i~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P-~g~g~ 82 (239)
+-+|+++..+|.+|.+.|+++|.++++.++ .++++|.+|+............... ...++++.+++|+++.| ..+|+
T Consensus 130 ~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~-~~~~i~~~S~sK~~~~~G~r~G~ 208 (350)
T 3fkd_A 130 MDFCWLCNPNNPDGRLLQRTEILRLLNDHPDTTFVLDQSYVSFTTEEVIRPADIKG-RKNLVMVYSFSHAYGIPGLRIGY 208 (350)
T ss_dssp CSEEEEESSCTTTCCCCCHHHHHHHHHHCTTSEEEEECTTTTSCSSCCCCGGGGTT-CSSEEEEEESHHHHSCGGGCCEE
T ss_pred CCEEEEeCCCCCcCCCCCHHHHHHHHHhCCCCEEEEECchhhhccCcchhhHHhhc-CCCEEEEecCchhccCcchheEe
Confidence 446667888999999999999999999876 7999999997543321111111211 23568889999998733 55787
Q ss_pred EEeeCcccccccccCCCCccCCCCceecCCCCCChHHHHHHHHHhCH-HHHHHHHHHHHHHHHHHHHHHhCCCCeEEEcC
Q 048438 83 LWATNPEYLKNKATESKPVVDYKDWQITLSRSFRSLKLWFVIRNYGM-ENLRHFLRSHVNMARLFERLVSGDKRFEVVFP 161 (239)
Q Consensus 83 l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~-~g~~~~~~~~~~la~~l~~~l~~~~g~~~~~~ 161 (239)
++. +++......... ..+ ....+..+.+...+.. +.+.+++++..++.+++.+.|++++++++. +
T Consensus 209 ~~~-~~~~~~~~~~~~------~~~------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~ 274 (350)
T 3fkd_A 209 IVA-NKDFMKRVAAFS------TPW------AVNALAIEAAKFILIHPAQFTLPIRKWQRNTVDFITALNRLDGVEVH-P 274 (350)
T ss_dssp EEC-CHHHHHHHHTTC------CTT------CSCHHHHHHHHHHHHCTTTTCCCHHHHHHHHHHHHHHHHHSTTEEEC-C
T ss_pred EEe-CHHHHHHHHHhC------CCC------CCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEC-C
Confidence 776 444433322110 001 1112333332222211 113334444458888999999888899874 5
Q ss_pred CCeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHh-cCcEEEEEEEE--CCEeEEEEEec
Q 048438 162 CHFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINA-SGKAYMTNVVL--GGIYAIRFATG 231 (239)
Q Consensus 162 ~~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~--~g~~~lR~~~~ 231 (239)
+..+.+.++++... ...+.+.|.+ .|......... .+..++|+++.
T Consensus 275 ~~~~~~~~~~~~~~------------------------~~~l~~~L~~~~gi~v~~g~~f~~~~~~~iRis~~ 323 (350)
T 3fkd_A 275 SGTTFFLLRLKKGT------------------------AAELKKYMLEEYNMLIRDASNFRGLDESYVRITTQ 323 (350)
T ss_dssp CSSSEEEEEESSSC------------------------HHHHHHHHHHTTCEECEECTTSTTCCTTEEEEECC
T ss_pred CCCcEEEEECCCCC------------------------HHHHHHHHHHHCCEEEEeCccCCCCCCCEEEEEcC
Confidence 66777778886521 1256677777 55554433222 23578999976
No 162
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.17 E-value=4.3e-10 Score=96.39 Aligned_cols=157 Identities=8% Similarity=0.025 Sum_probs=91.8
Q ss_pred cEEEEEecCCCCcccccChhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEE--cCcccCCCcccceE
Q 048438 5 PLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSL--NAHKWFFATLDCCC 82 (239)
Q Consensus 5 p~~vv~t~gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~--~~hK~l~~P~g~g~ 82 (239)
+.+|+++ +.+|...|+++|.++|+++|+++|+|+||+.+... + .+ ..+. ..|..++ .+.|.+.+|.| |+
T Consensus 129 ~~~v~~~---~~~g~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~-~-~~--~~g~-~~~~~~~s~~~~k~~~~g~g-G~ 199 (390)
T 3b8x_A 129 TKAILTV---NLLGNPNNFDEINKIIGGRDIILLEDNCESMGATF-N-NK--CAGT-FGLMGTFSSFYSNHIATMEG-GC 199 (390)
T ss_dssp EEEEEEE---CGGGCCCCHHHHHHHHTTSCCEEEEECTTCTTCEE-T-TE--ETTS-SSSEEEEECCTTSSSCSSSC-EE
T ss_pred CeEEEEE---CCccChhhHHHHHHHHHHcCCEEEEECcCcccCEE-C-Cc--cccc-ccceEEEEccCCCCCccCCc-eE
Confidence 4455554 36899999999999999999999999999977654 2 11 1121 1344443 34455566666 77
Q ss_pred EEeeCcccc---cccccCCC-Cc-------------cCC-CCcee-cCCCC--CChHHHHHHHHHhCHHHHHHHHHHHHH
Q 048438 83 LWATNPEYL---KNKATESK-PV-------------VDY-KDWQI-TLSRS--FRSLKLWFVIRNYGMENLRHFLRSHVN 141 (239)
Q Consensus 83 l~~~~~~~l---~~~~~~~~-~~-------------~~~-~~~~~-~~~~~--~~~~~~~~~l~~~g~~g~~~~~~~~~~ 141 (239)
++.+++... ........ .. ..+ ..+.. ..+.+ ...+..+.++.. .+.++++.++..+
T Consensus 200 ~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~--l~~l~~~~~~~~~ 277 (390)
T 3b8x_A 200 IVTDDEEIYHILLCIRAHGWTRNLPKKNKVTGVKSDDQFEESFKFVLPGYNVRPLEMSGAIGIEQ--LKKLPRFISVRRK 277 (390)
T ss_dssp EEESCHHHHHHHHHHTBTTBSTTSCSEETTTEECCSCTTTSSSCBCSCCCBCCCCHHHHHHHHHH--HHHHHHHHHHHHH
T ss_pred EEeCCHHHHHHHHHHHhcCCCccccccccccccccccccccccceeccccccCcCHHHHHHHHHH--HHHHHHHHHHHHH
Confidence 777653321 11110000 00 000 01111 12222 334554544444 3567788888999
Q ss_pred HHHHHHHHHhCCCCeEEEcCC-CeeE--EEEEEc
Q 048438 142 MARLFERLVSGDKRFEVVFPC-HFAV--VCFRVS 172 (239)
Q Consensus 142 la~~l~~~l~~~~g~~~~~~~-~~~i--v~f~~~ 172 (239)
+++++.+.|++++++++..++ ..+. +.+.++
T Consensus 278 ~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~ 311 (390)
T 3b8x_A 278 NAEYFLDKFKDHPYLDVQQETGESSWFGFSFIIK 311 (390)
T ss_dssp HHHHHHHHHTTCSSEEECCCCSBCCCCEEEEEEC
T ss_pred HHHHHHHHhcCCCCcccCCCCCCcccEEEEEEec
Confidence 999999999998899886543 3443 444554
No 163
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=99.17 E-value=1.4e-09 Score=94.70 Aligned_cols=199 Identities=13% Similarity=-0.026 Sum_probs=107.8
Q ss_pred CccEEEEEecCCCCcccccC----hhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCcc
Q 048438 3 LIPLFLCATIGTTAITAVDP----LKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATL 78 (239)
Q Consensus 3 ~~p~~vv~t~gtt~~G~i~p----l~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~ 78 (239)
..+.+|++....+++|.+.| +++|.++|++||+++++|.+|++.............++ ..|.+ ++.|.+++..
T Consensus 200 ~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DE~~~g~g~~g~~~~~~~~~~-~~di~--s~sK~~~~G~ 276 (439)
T 3dxv_A 200 GSIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGILVVCDEVKVGLARSGRLHCFEHEGF-VPDIL--VLGKGLGGGL 276 (439)
T ss_dssp TCEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTCTTTTSSSSGGGGTTC-CCSEE--EECGGGGTTS
T ss_pred CCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhHHHhcCC-CCCEE--EEcchhcCCc
Confidence 34667777777888999999 99999999999999999999974211111011012233 27777 4569987544
Q ss_pred cceEEEeeCcccccccccCCCCccCCCCceecCCCCCChHHHHH---HHHHhCHHHHHHHHHHHHHHHHHHHHHHhC---
Q 048438 79 DCCCLWATNPEYLKNKATESKPVVDYKDWQITLSRSFRSLKLWF---VIRNYGMENLRHFLRSHVNMARLFERLVSG--- 152 (239)
Q Consensus 79 g~g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~l~~~g~~g~~~~~~~~~~la~~l~~~l~~--- 152 (239)
..|+++.+ ++.+...... ....+- ...+...+ +++.+.. ++..++..++.+++++.|.+
T Consensus 277 riG~~~~~-~~~~~~~~~~----------~~~~t~-~~~~~~~aa~aal~~~~~---~~~~~~~~~~~~~~~~~l~~~~~ 341 (439)
T 3dxv_A 277 PLSAVIAP-AEILDCASAF----------AMQTLH-GNPISAAAGLAVLETIDR---DDLPAMAERKGRLLRDGLSELAK 341 (439)
T ss_dssp CCEEEEEE-HHHHTSCSSS----------SCCTTT-TCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEC-HHHHhhhcCC----------CcCCCc-ccHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHH
Confidence 56877764 3333322210 000011 12233333 3333222 33445555666666666654
Q ss_pred -CCCeEEEcCCCeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhcCcEEEEEEEECCEeEEEEEec
Q 048438 153 -DKRFEVVFPCHFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINASGKAYMTNVVLGGIYAIRFATG 231 (239)
Q Consensus 153 -~~g~~~~~~~~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~ 231 (239)
.+.+..+ ++..+++.+.+...... ...+ ......+.+.|.++|.++... . ....++|++++
T Consensus 342 ~~~~~~~~-~~~g~~~~~~~~~~~~~-----------~~~~----~~~~~~~~~~l~~~Gv~v~~~-~-~~~~~iRi~~~ 403 (439)
T 3dxv_A 342 RHPLIGDI-RGRGLACGMELVCDRQS-----------REPA----RAETAKLIYRAYQLGLVVYYV-G-MNGNVLEFTPP 403 (439)
T ss_dssp HCTTEEEE-EEETTEEEEEEEEETTT-----------TEEC----HHHHHHHHHHHHHHTEECEEE-S-TTSCEEEECCC
T ss_pred hCCCeEEE-EEEEEEEEEEEecCccc-----------cCCC----HHHHHHHHHHHHHCCcEEeec-C-CCCCEEEEECC
Confidence 3444433 33455666666321000 0001 122345667777777665443 1 22378999976
Q ss_pred CCCCCc
Q 048438 232 ATLTEE 237 (239)
Q Consensus 232 ~~~t~~ 237 (239)
...|.+
T Consensus 404 ~~~t~e 409 (439)
T 3dxv_A 404 LTITET 409 (439)
T ss_dssp TTCCHH
T ss_pred CCCCHH
Confidence 655543
No 164
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=99.17 E-value=1.8e-10 Score=98.56 Aligned_cols=78 Identities=17% Similarity=0.143 Sum_probs=58.4
Q ss_pred cEE-EEEecCCCCcc-cccChhHHHHHHHHhCCEEEEecccccccc-cCcccccccCCCCCcceEEEcCcccCCCcccce
Q 048438 5 PLF-LCATIGTTAIT-AVDPLKPLCDVAKQFGIWVHVDAAYAGSAC-IFPEFRHFIDGVEGADSFSLNAHKWFFATLDCC 81 (239)
Q Consensus 5 p~~-vv~t~gtt~~G-~i~pl~~i~~i~~~~gi~lhvD~A~~~~~~-~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g 81 (239)
+-+ |+.+..++.+| ...|+++|.++|++||+++++|++|+.+.. +...... .. + ++|+++.++||++++| +.|
T Consensus 141 ~~~~v~~~~p~nptG~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~-~~-~-~~di~~~S~sK~l~g~-~~G 216 (374)
T 2aeu_A 141 DTLVIITGSTMDLKVIELENFKKVINTAKNKEAIVFVDDASGARVRLLFNQPPA-LK-L-GADLVVTSTDKLMEGP-RGG 216 (374)
T ss_dssp TEEEEEECBCTTSCBCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHTTCCCH-HH-H-TCSEEEEETTSSSSSC-SCE
T ss_pred ccEEEEEccCCCCCCCCcccHHHHHHHHHHcCCEEEEECCcccccccccccCCc-cc-c-CCcEEEecCcccccCc-ceE
Confidence 445 66777788899 899999999999999999999999987631 1111000 11 1 3799999999998775 778
Q ss_pred EEEee
Q 048438 82 CLWAT 86 (239)
Q Consensus 82 ~l~~~ 86 (239)
+++.+
T Consensus 217 ~~~~~ 221 (374)
T 2aeu_A 217 LLAGK 221 (374)
T ss_dssp EEEEE
T ss_pred EEEEC
Confidence 87764
No 165
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=99.16 E-value=3.6e-10 Score=98.45 Aligned_cols=81 Identities=15% Similarity=0.114 Sum_probs=57.2
Q ss_pred ccEEEEEecCCCCcccccC---hhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCcccc
Q 048438 4 IPLFLCATIGTTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATLDC 80 (239)
Q Consensus 4 ~p~~vv~t~gtt~~G~i~p---l~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~ 80 (239)
.+.+|+++..+|.+|.+.| +++|+++|++||+++|+|.+|+.+..... +..........++++.++||++....++
T Consensus 206 ~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~-~~~~~~~~~~~~i~~~S~sK~~~~G~r~ 284 (444)
T 3if2_A 206 RIGAICCSRPTNPTGNVLTDEEMAHLAEIAKRYDIPLIIDNAYGMPFPNII-YSDAHLNWDNNTILCFSLSKIGLPGMRT 284 (444)
T ss_dssp CEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCCB-CSCCCCCCCTTEEEEEESTTTTCGGGCC
T ss_pred CceEEEeCCCCCCCCCcCCHHHHHHHHHHHHHCCCEEEEECCCCCcccccc-cccccccCCCCEEEEechhhccCCCCce
Confidence 3567777888899999999 88999999999999999999975321111 0000111224789999999985444567
Q ss_pred eEEEe
Q 048438 81 CCLWA 85 (239)
Q Consensus 81 g~l~~ 85 (239)
|+++.
T Consensus 285 G~~~~ 289 (444)
T 3if2_A 285 GIIVA 289 (444)
T ss_dssp EEEEC
T ss_pred EEEEE
Confidence 76655
No 166
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=99.16 E-value=3.8e-10 Score=97.34 Aligned_cols=197 Identities=14% Similarity=0.078 Sum_probs=107.2
Q ss_pred cEEEEEecCCCCcccccC---hhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCcccce
Q 048438 5 PLFLCATIGTTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATLDCC 81 (239)
Q Consensus 5 p~~vv~t~gtt~~G~i~p---l~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g 81 (239)
+.+|+.+..+|.+|.+.| +++|+++|++||+++++|.+|+....... +..........++++.+++|++.....+|
T Consensus 181 ~~~v~~~~p~NptG~~~~~~~~~~l~~~a~~~~~~li~De~~~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~~~G~r~G 259 (417)
T 3g7q_A 181 TGMICVSRPTNPTGNVITDEELMKLDRLANQHNIPLVIDNAYGVPFPGII-FSEARPLWNPNIILCMSLSKLGLPGSRCG 259 (417)
T ss_dssp EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCCB-CSCCCCCCCTTEEEEEESGGGTCTTSCCE
T ss_pred ceEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEeCCCcccccccc-ccccccCCCCCEEEEEechhccCCCcceE
Confidence 567788888999999998 89999999999999999999975321111 10001112247888999999754444577
Q ss_pred EEEeeCcccccccccCCCCccCCCCceecCCCCCChHHHHHHHHHhCHHH-HHH-HHHHHHHHHHHHHHHHhC-CC--Ce
Q 048438 82 CLWATNPEYLKNKATESKPVVDYKDWQITLSRSFRSLKLWFVIRNYGMEN-LRH-FLRSHVNMARLFERLVSG-DK--RF 156 (239)
Q Consensus 82 ~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~g-~~~-~~~~~~~la~~l~~~l~~-~~--g~ 156 (239)
+++. +++......... ..+.. .........+...++...... ..+ ..++..++.+++.+.|.+ ++ ++
T Consensus 260 ~~~~-~~~~~~~~~~~~------~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 331 (417)
T 3g7q_A 260 IIIA-NDKTITAIANMN------GIISL-APGGMGPAMMCEMIKRNDLLRLSETVIKPFYYQRVQQTIAIIRRYLSEERC 331 (417)
T ss_dssp EEEC-CHHHHHHHHHHH------HHHCC-CCCSHHHHHHHHHHHTTCHHHHHHHTHHHHHHHHHHHHHHHHHHHCCTTTC
T ss_pred EEEe-CHHHHHHHHHhh------cceee-CCCcHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCc
Confidence 6665 333332221000 00000 011111222222333222211 112 333444556666666654 34 57
Q ss_pred EEEcCCCeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhcCcEEEEEEEE-CC--------EeEEE
Q 048438 157 EVVFPCHFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINASGKAYMTNVVL-GG--------IYAIR 227 (239)
Q Consensus 157 ~~~~~~~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~-~g--------~~~lR 227 (239)
++..+.....+.+.++..+. + ...+.+.|.++|..+.+.... .+ ..++|
T Consensus 332 ~~~~~~~g~~~~~~~~~~~~---------------~-------~~~l~~~l~~~gi~v~~g~~f~~~~~~~~~~~~~~iR 389 (417)
T 3g7q_A 332 LIHKPEGAIFLWLWFKDLPI---------------T-------TELLYQRLKARGVLMVPGHYFFPGLDKPWPHTHQCMR 389 (417)
T ss_dssp EEECCCBSSEEEEECTTCSS---------------C-------HHHHHHHHHHTTEECEEGGGGCTTBSSCCGGGGGEEE
T ss_pred eeeCCCcceEEEEEcCCCCC---------------C-------HHHHHHHHHHCCEEEECchhhCCCCccccccCCCeEE
Confidence 77766556667777764221 0 125566676676655443221 11 46899
Q ss_pred EEecC
Q 048438 228 FATGA 232 (239)
Q Consensus 228 ~~~~~ 232 (239)
+++..
T Consensus 390 is~~~ 394 (417)
T 3g7q_A 390 MNYVP 394 (417)
T ss_dssp EESCS
T ss_pred EEecC
Confidence 99864
No 167
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=99.15 E-value=1.2e-09 Score=95.70 Aligned_cols=193 Identities=9% Similarity=0.004 Sum_probs=107.0
Q ss_pred ccEEEEEecCCCCcccccC----hhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCccc
Q 048438 4 IPLFLCATIGTTAITAVDP----LKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATLD 79 (239)
Q Consensus 4 ~p~~vv~t~gtt~~G~i~p----l~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g 79 (239)
.+.+|++....+++|.+.| +++|.++|++||+++++|.+|++.......+.....++ ..|+++++ |++ |
T Consensus 231 ~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~~~-~~di~t~s--K~l--~-- 303 (449)
T 2cjg_A 231 DIACFVAEPIQGEGGDRHFRPEFFAAMRELCDEFDALLIFDEVQTGCGLTGTAWAYQQLDV-APDIVAFG--KKT--Q-- 303 (449)
T ss_dssp TEEEEEECSEETTTTCEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSTHHHHTC-CCSEEEEC--GGG--S--
T ss_pred ceEEEEEeCcCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccccCCCccCcceeecccCC-CceEEEec--Ccc--c--
Confidence 4567777776778998888 99999999999999999999984211111011001233 37887665 997 5
Q ss_pred ceEEEeeCcccccccccCCCCccCCCCceecCCCCCChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhC----CCC
Q 048438 80 CCCLWATNPEYLKNKATESKPVVDYKDWQITLSRSFRSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSG----DKR 155 (239)
Q Consensus 80 ~g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~----~~g 155 (239)
+|++++++ +........... ......+. .+..+...+...+++.+.. ++..++..++.+++.+.|++ .+.
T Consensus 304 iG~~~~~~-~~~~~l~~~~~~-~~~~~~t~-~~n~~~~~aa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~ 377 (449)
T 2cjg_A 304 VCGVMAGR-RVDEVADNVFAV-PSRLNSTW-GGNLTDMVRARRILEVIEA---EGLFERAVQHGKYLRARLDELAADFPA 377 (449)
T ss_dssp SEEEEECG-GGGGSTTCTTTS-TTSSCCSS-SSCHHHHHHHHHHHHHHHH---HTHHHHHHHHHHHHHHHHHHHHHHSTT
T ss_pred EEEEEECH-HHhhhhhhcccC-CcccccCC-CCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 67777753 444321100000 00000010 1111122223334443322 23455666888888888875 344
Q ss_pred -eEEEcCCCeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhcCcEEEEEEEECCEeEEEEEecCCC
Q 048438 156 -FEVVFPCHFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINASGKAYMTNVVLGGIYAIRFATGATL 234 (239)
Q Consensus 156 -~~~~~~~~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~ 234 (239)
+..+ ++..+++.|.++.. .....+.+.|.++|.+.... |..++|+++....
T Consensus 378 ~~~~~-~~~g~~~~~~~~~~-----------------------~~~~~~~~~l~~~Gv~v~~~----g~~~iRi~~~~~~ 429 (449)
T 2cjg_A 378 VVLDP-RGRGLMCAFSLPTT-----------------------ADRDELIRQLWQRAVIVLPA----GADTVRFRPPLTV 429 (449)
T ss_dssp TSEEE-EEETTEEEEECSSH-----------------------HHHHHHHHHHHHTTEECEEE----TTTEEEECCCTTC
T ss_pred ceeeE-eeccEEEEEEECCh-----------------------HHHHHHHHHHHHCCeEEecC----CCCEEEEECCCCC
Confidence 4433 23456777766431 11235677777766554432 4578999876555
Q ss_pred CCc
Q 048438 235 TEE 237 (239)
Q Consensus 235 t~~ 237 (239)
|++
T Consensus 430 t~e 432 (449)
T 2cjg_A 430 STA 432 (449)
T ss_dssp CHH
T ss_pred CHH
Confidence 544
No 168
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=99.15 E-value=3.5e-10 Score=97.77 Aligned_cols=160 Identities=11% Similarity=0.013 Sum_probs=96.8
Q ss_pred ccEEEEEecCCCCccccc---ChhHHHHHHHHhCCEEEEecccccccccCcccccc--cCCCCCcceEEEcCcccCCCc-
Q 048438 4 IPLFLCATIGTTAITAVD---PLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHF--IDGVEGADSFSLNAHKWFFAT- 77 (239)
Q Consensus 4 ~p~~vv~t~gtt~~G~i~---pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~--~~~~~~~Ds~~~~~hK~l~~P- 77 (239)
.+-+|+++..+|.+|.+. ++++|+++|++||+++++|.+|+............ .......++++.+++|.++.|
T Consensus 174 ~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G 253 (422)
T 3fvs_A 174 RTKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGKTFSATG 253 (422)
T ss_dssp TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHHTCGG
T ss_pred CceEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCChhhcccccCcEEEEecchhccCCcc
Confidence 356777788899999998 59999999999999999999998643321111000 111112568888999998633
Q ss_pred ccceEEEeeCcccccccccCCCCccCCCCceecCCCCCChHHHHHHHHH------hCHHHHHHHHHHHHHHHHHHHHHHh
Q 048438 78 LDCCCLWATNPEYLKNKATESKPVVDYKDWQITLSRSFRSLKLWFVIRN------YGMENLRHFLRSHVNMARLFERLVS 151 (239)
Q Consensus 78 ~g~g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~------~g~~g~~~~~~~~~~la~~l~~~l~ 151 (239)
..+|+++.. ++.+...... .....+. ........+..+++. ...+.+++..++..++.+++.+.|+
T Consensus 254 ~r~G~~~~~-~~~~~~~~~~----~~~~~~~---~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 325 (422)
T 3fvs_A 254 WKVGWVLGP-DHIMKHLRTV----HQNSVFH---CPTQSQAAVAESFEREQLLFRQPSSYFVQFPQAMQRCRDHMIRSLQ 325 (422)
T ss_dssp GCCEEEECC-HHHHHHHHHH----HHTTTCC---CCHHHHHHHHHHHHHHHHTTTCTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEeC-HHHHHHHHHH----HhhccCC---CCcHHHHHHHHHHhhccccccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 457777763 3333221100 0000010 001111222233332 1234567777888899999999999
Q ss_pred CCCCeEEEcCCCeeEEEEEEc
Q 048438 152 GDKRFEVVFPCHFAVVCFRVS 172 (239)
Q Consensus 152 ~~~g~~~~~~~~~~iv~f~~~ 172 (239)
+. |++++.+.....+.+.++
T Consensus 326 ~~-g~~~~~~~~~~~~~~~~~ 345 (422)
T 3fvs_A 326 SV-GLKPIIPQGSYFLITDIS 345 (422)
T ss_dssp TT-TCEEEBCSBSSEEEEECH
T ss_pred Hc-CCeecCCCeeeEEEEech
Confidence 87 898876666666666654
No 169
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=99.14 E-value=1.1e-09 Score=95.09 Aligned_cols=155 Identities=10% Similarity=0.001 Sum_probs=94.2
Q ss_pred cEEEEEecCCCCcccccChhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCc--ccCCCcccceE
Q 048438 5 PLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAH--KWFFATLDCCC 82 (239)
Q Consensus 5 p~~vv~t~gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~h--K~l~~P~g~g~ 82 (239)
+-+|+++ +.+|...|+++|.++|+++|+++++|++|+.+... +. +. +.. ..|++++++| |++.+ ...|+
T Consensus 139 ~~~v~~~---~~tG~~~~l~~i~~la~~~~~~li~Dea~~~g~~~-~~-~~-~~~--~~di~~~S~sk~K~l~~-~~~G~ 209 (424)
T 2po3_A 139 TSAVVGV---HLWGRPCAADQLRKVADEHGLRLYFDAAHALGCAV-DG-RP-AGS--LGDAEVFSFHATKAVNA-FEGGA 209 (424)
T ss_dssp EEEEEEE---CGGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEE-TT-EE-TTS--SSSEEEEECCTTSSSCC-SSCEE
T ss_pred CcEEEEE---CCCCCcCCHHHHHHHHHHcCCEEEEECccccCCeE-CC-ee-ccc--ccCEEEEeCCCCCCccC-CCCeE
Confidence 4455554 37899999999999999999999999999855432 11 11 111 2577777776 98765 45676
Q ss_pred EEeeCcccccccc---cC-CCCccCCCCceecCCCCCChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCCCCeEE
Q 048438 83 LWATNPEYLKNKA---TE-SKPVVDYKDWQITLSRSFRSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSGDKRFEV 158 (239)
Q Consensus 83 l~~~~~~~l~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~~ 158 (239)
++.++++.+.... .. .....+.. ......++..+..+.++.. .+.++++.++..++++++.+.|++++++++
T Consensus 210 ~v~~~~~l~~~l~~~~~~~~~~~~~~~--~~g~~~~~~~~~aa~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~ 285 (424)
T 2po3_A 210 VVTDDADLAARIRALHNFGFDLPGGSP--AGGTNAKMSEAAAAMGLTS--LDAFPEVIDRNRRNHAAYREHLADLPGVLV 285 (424)
T ss_dssp EEESCHHHHHHHHHHHBTTTTCTTCCT--TCCCBCCCCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHTCSCTTEEE
T ss_pred EEeCCHHHHHHHHHHHhcCcccccccc--ccCcCCCcCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhccCCCccc
Confidence 6665344332211 10 00001000 1111123344444444432 356677888888999999999999889998
Q ss_pred EcCCC-----eeEEEEEEc
Q 048438 159 VFPCH-----FAVVCFRVS 172 (239)
Q Consensus 159 ~~~~~-----~~iv~f~~~ 172 (239)
..++. ..++.+.++
T Consensus 286 ~~~~~~~~~~~~~~~i~~~ 304 (424)
T 2po3_A 286 ADHDRHGLNNHQYVIVEID 304 (424)
T ss_dssp CCGGGGSCCCCCCEEEEEC
T ss_pred cCCCCCCccccEEEEEEEC
Confidence 76332 246667765
No 170
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=99.14 E-value=8.5e-10 Score=96.20 Aligned_cols=193 Identities=10% Similarity=-0.025 Sum_probs=107.5
Q ss_pred ccEEEEEecCCCCccccc----ChhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCc-c
Q 048438 4 IPLFLCATIGTTAITAVD----PLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFAT-L 78 (239)
Q Consensus 4 ~p~~vv~t~gtt~~G~i~----pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P-~ 78 (239)
.+.+|++....+++|.+. ++++|.++|++||+++++|.+|++.......+.....++ ..|+++ +.|++++. .
T Consensus 212 ~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g~~g~~~~~~~~~~-~~di~t--~sK~l~~G~~ 288 (433)
T 1z7d_A 212 NVCAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGRTGKLLCVHHYNV-KPDVIL--LGKALSGGHY 288 (433)
T ss_dssp TEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTC-CCSEEE--ECGGGGTTSS
T ss_pred CEEEEEEECCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCccCCCcCCcchhhHhcCC-CCCEEE--ECccccCCCC
Confidence 356677776666789876 799999999999999999999974211111010011233 378775 56998854 3
Q ss_pred cceEEEeeCcccccccccCCCCccCCCCceecCCCCCChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCC----C
Q 048438 79 DCCCLWATNPEYLKNKATESKPVVDYKDWQITLSRSFRSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSGD----K 154 (239)
Q Consensus 79 g~g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~----~ 154 (239)
..|+++.++ +........ ....++ .+..........+++.+..+ +..++..++.+++.+.|+++ +
T Consensus 289 ~~G~v~~~~-~~~~~l~~~------~~~~t~-~~~~~~~aaa~aal~~~~~~---~~~~~~~~~~~~l~~~L~~l~~~~~ 357 (433)
T 1z7d_A 289 PISAVLAND-DIMLVIKPG------EHGSTY-GGNPLAASICVEALNVLINE---KLCENAEKLGGPFLENLKRELKDSK 357 (433)
T ss_dssp CCEEEEECH-HHHTTCCTT------CCCCTT-TTCHHHHHHHHHHHHHHHHT---THHHHHHHHHHHHHHHHHHHHTTCT
T ss_pred CeEEEEECH-HHHhhhccc------cccccC-CCCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 488888753 433322110 000111 11111222233344443222 34556667888888888653 3
Q ss_pred CeEEEcCCCeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhcCcEEEEEEEECCEeEEEEEecCCC
Q 048438 155 RFEVVFPCHFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINASGKAYMTNVVLGGIYAIRFATGATL 234 (239)
Q Consensus 155 g~~~~~~~~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~ 234 (239)
.+..+ ++..+++.+.+++... ....+.+.|.++|.++... +..++|+++....
T Consensus 358 ~~~~~-~~~g~~~~i~~~~~~~----------------------~~~~~~~~l~~~Gv~v~~~----~~~~iRi~~~~~~ 410 (433)
T 1z7d_A 358 IVRDV-RGKGLLCAIEFKNELV----------------------NVLDICLKLKENGLITRDV----HDKTIRLTPPLCI 410 (433)
T ss_dssp TEEEE-EEETTEEEEEECTTTC----------------------CHHHHHHHHHHTTEECCEE----TTTEEEECCCTTC
T ss_pred CeEEE-EeeeeEEEEEEccChh----------------------HHHHHHHHHHHCCeEEecC----CCCEEEEECCcCC
Confidence 32222 2345677787764200 0125667777776554331 4568999876555
Q ss_pred CCc
Q 048438 235 TEE 237 (239)
Q Consensus 235 t~~ 237 (239)
|++
T Consensus 411 t~e 413 (433)
T 1z7d_A 411 TKE 413 (433)
T ss_dssp CHH
T ss_pred CHH
Confidence 543
No 171
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=99.14 E-value=1.4e-09 Score=95.99 Aligned_cols=186 Identities=15% Similarity=0.134 Sum_probs=102.4
Q ss_pred ccEEEEEecCCCCcccccC----hhHHHHHHHHhCCEEEEeccccc-ccccCcccccccCCCC-CcceEEEcCccc-CCC
Q 048438 4 IPLFLCATIGTTAITAVDP----LKPLCDVAKQFGIWVHVDAAYAG-SACIFPEFRHFIDGVE-GADSFSLNAHKW-FFA 76 (239)
Q Consensus 4 ~p~~vv~t~gtt~~G~i~p----l~~i~~i~~~~gi~lhvD~A~~~-~~~~~~~~~~~~~~~~-~~Ds~~~~~hK~-l~~ 76 (239)
.+.+|++....+++|.+.| +++|.++|++||+++|+|.+|++ +... ..+.....++. .+|+++++ |+ +++
T Consensus 258 ~~~~vive~v~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g-~~~~~~~~gv~~~~Di~t~s--K~~l~G 334 (472)
T 1ohv_A 258 TVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAFLVDEVQTGGGSTG-KFWAHEHWGLDDPADVMTFS--KKMMTG 334 (472)
T ss_dssp CEEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTS-SSSGGGGGCCSSCCSEEEEC--GGGSSE
T ss_pred CEEEEEEcCCcCCCCCCCCCHHHHHHHHHHHHHhCCEEEEeCcccCCCCCC-CchhccccCCCCCCCEEEEc--cccccC
Confidence 4567777777788999888 99999999999999999999974 2110 00000011221 27888766 98 441
Q ss_pred cccceEEEeeCcccccccccCCCCccCCCCceecCCCCCChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCC---
Q 048438 77 TLDCCCLWATNPEYLKNKATESKPVVDYKDWQITLSRSFRSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSGD--- 153 (239)
Q Consensus 77 P~g~g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~--- 153 (239)
|++ + ++.. ..... . .......+......+...+++.+..+ +..++..++.+++.+.|+++
T Consensus 335 ----G~~-~-~~~~-~~~~~----~---~~~~T~~~~~~~~aaa~aal~~~~~~---~~~~~~~~~~~~l~~~L~~l~~~ 397 (472)
T 1ohv_A 335 ----GFF-H-KEEF-RPNAP----Y---RIFNTWLGDPSKNLLLAEVINIIKRE---DLLSNAAHAGKVLLTGLLDLQAR 397 (472)
T ss_dssp ----EEE-E-CGGG-SCSSS----S---SSCCSSSSCHHHHHHHHHHHHHHHHT---THHHHHHHHHHHHHHHHHHHHHH
T ss_pred ----Ccc-C-chhh-ccccc----c---cccCccCccHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHhh
Confidence 444 3 3332 21110 0 00000011111222233444443222 34556668888888888653
Q ss_pred -CC-eEEEcCCCeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhcCcEEEEEEEECCEeEEEEEec
Q 048438 154 -KR-FEVVFPCHFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINASGKAYMTNVVLGGIYAIRFATG 231 (239)
Q Consensus 154 -~g-~~~~~~~~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~ 231 (239)
++ +.-+ .+...++.|.++. ......+.+.|.++|..... .|..+||+++.
T Consensus 398 ~~~~v~~~-~~~g~~~~~~~~~-----------------------~~~~~~~~~~l~~~Gv~~~~----~g~~~iRi~~~ 449 (472)
T 1ohv_A 398 YPQFISRV-RGRGTFCSFDTPD-----------------------ESIRNKLISIARNKGVMLGG----CGDKSIRFRPT 449 (472)
T ss_dssp CTTTCEEE-EEETTEEEEECSS-----------------------HHHHHHHHHHHHHTTEECEE----ETTTEEEECCC
T ss_pred CCCcEEee-cCCceEEEEEeCC-----------------------hhHHHHHHHHHHHCCeEEec----CCCCEEEEECC
Confidence 32 3322 2234566665532 11233677777777765443 14568999977
Q ss_pred CCCCCc
Q 048438 232 ATLTEE 237 (239)
Q Consensus 232 ~~~t~~ 237 (239)
..+|++
T Consensus 450 ~~~t~e 455 (472)
T 1ohv_A 450 LVFRDH 455 (472)
T ss_dssp TTCCHH
T ss_pred CCCCHH
Confidence 666654
No 172
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=99.13 E-value=2.3e-10 Score=98.15 Aligned_cols=135 Identities=15% Similarity=0.085 Sum_probs=81.8
Q ss_pred CCCCcccccChhHHHHHHHHhCCEEEEecccccccccCccccccc-CCCCCcceEEEcCcccCCCcccceEEEeeCcccc
Q 048438 13 GTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFI-DGVEGADSFSLNAHKWFFATLDCCCLWATNPEYL 91 (239)
Q Consensus 13 gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~-~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~~l 91 (239)
.++.+|...|+++|.++|+ +|+++|+|+||+.+...-. +. . .....++.+++++||+++++ ..|+++.++++..
T Consensus 135 ~~~~~G~~~~~~~i~~la~-~~~~vi~D~a~a~g~~~~~--~~-~g~~~~d~~~~S~~~~K~l~~g-~gG~~~~~~~~l~ 209 (377)
T 3ju7_A 135 PYATFGSWMNLEEYEELEK-KGVPVVVDAAPGFGLMNGG--MH-YGQDFSGMIIYSFHATKPFGIG-EGGLIYSKNEEDI 209 (377)
T ss_dssp CBCGGGBCCCCHHHHHHHH-TTCCBEEECTTCTTCEETT--EE-TTTTCSSEEEEECBTTSSSCCB-SCEEEEESCHHHH
T ss_pred EECCCCCccCHHHHHHHHh-cCCEEEEECCCccCCeECC--Ee-ccCCCCcEEEEECCCCCcCCCC-CcEEEEECCHHHH
Confidence 4567899999999999999 9999999999987754211 11 1 11123677777789999863 4566666554332
Q ss_pred ccccc--CCCCccCCCCceecCCCC--CChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCCCCe
Q 048438 92 KNKAT--ESKPVVDYKDWQITLSRS--FRSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSGDKRF 156 (239)
Q Consensus 92 ~~~~~--~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~ 156 (239)
..... ..+....+ .....+.+ ...+..+..+. +.+.++++.++..++++++.+.|++++++
T Consensus 210 ~~~~~~~~~g~~~~~--~~~~~g~~~~~~~~~aa~~~~--~l~~l~~~~~~~~~~~~~~~~~L~~~~~~ 274 (377)
T 3ju7_A 210 QRIKRMGNFGFDTNR--ECTMMGFNCKMSEYAAAIGIA--TMKKWDDKLKERTRISEWYKQLLQSNGLM 274 (377)
T ss_dssp HHHHHHTBTTBCTTS--CBCSSCCBCCCCHHHHHHHHH--HHHTHHHHHHHHHHHHHHHHHHHHHTTTT
T ss_pred HHHHHHHhcCCCCCC--ceeeccccCCCCHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 21110 00000000 01112222 33343333333 23566788888889999999999987654
No 173
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=99.12 E-value=3.6e-10 Score=96.95 Aligned_cols=193 Identities=9% Similarity=-0.026 Sum_probs=106.9
Q ss_pred cEEEEEecCCCCcccccC---hhHHHHHHHH------hCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCC
Q 048438 5 PLFLCATIGTTAITAVDP---LKPLCDVAKQ------FGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFF 75 (239)
Q Consensus 5 p~~vv~t~gtt~~G~i~p---l~~i~~i~~~------~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~ 75 (239)
+-+|+++..+|.+|.+.| +++|+++|++ ||+++++|.+|+........... .......+.++.++||+++
T Consensus 173 ~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~-~~~~~~~~i~~~s~sK~~~ 251 (398)
T 3ele_A 173 TRGVIINSPNNPSGTVYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGIKVPF-VTKYYDNTLVCYSYSKSLS 251 (398)
T ss_dssp EEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHHHTSCCEEEEECTTTTCBCTTCCCCC-GGGTCSSEEEEEESTTTSS
T ss_pred CCEEEEcCCCCCCCCCCCHHHHHHHHHHHHhhhhccCCCeEEEEeccccccccCCCCcCC-hHhhcCCeEEEEehhhcCC
Confidence 556777788999999988 6777789999 99999999999864332111111 1111236788999999986
Q ss_pred -CcccceEEEeeCcccccccccCCCCccCCCCceecC-CCCCChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCC
Q 048438 76 -ATLDCCCLWATNPEYLKNKATESKPVVDYKDWQITL-SRSFRSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSGD 153 (239)
Q Consensus 76 -~P~g~g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~ 153 (239)
....+|++++.+. ........ ... ....... ......+....+...+.... ..++..++.+++.+.|++.
T Consensus 252 ~~G~r~G~~~~~~~-~~~~~~~~--~~~--~~~~~~~~~~~~~~~~~~a~~~~l~~~~---~~~~~~~~~~~l~~~L~~~ 323 (398)
T 3ele_A 252 LPGERIGYVLVPDE-VYDKAELY--AAV--CGAGRALGYVCAPSLFQKMIVKCQGATG---DINAYKENRDLLYEGLTRI 323 (398)
T ss_dssp CTTTCCEEEECCTT-STTHHHHH--HHH--HHHHHHTTCCCSCHHHHHHHTTCTTCCC---CHHHHHHHHHHHHHHHHHH
T ss_pred CccceeEEEEEcch-hhhHHHHH--HHH--HHHhhhccccCCCHHHHHHHHHHhcCHH---HHHHHHHHHHHHHHHHHHc
Confidence 4455788887542 22100000 000 0000000 00111122222222221111 2344557778888888876
Q ss_pred CCeEEEcCCCeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhcCcEEEEEEEECCEeEEEEEec
Q 048438 154 KRFEVVFPCHFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINASGKAYMTNVVLGGIYAIRFATG 231 (239)
Q Consensus 154 ~g~~~~~~~~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~ 231 (239)
|++++.+.....+.+.++... ...+.+.|.++|..+.+........++|+++.
T Consensus 324 -g~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~l~~~gi~v~~g~~~~~~~~iRis~~ 376 (398)
T 3ele_A 324 -GYHCFKPDGAFYMFVKALEDD------------------------SNAFCEKAKEEDVLIVAADGFGCPGWVRISYC 376 (398)
T ss_dssp -TCCEECCSBSSEEEEECSSSC------------------------HHHHHHHHHTTTEECEESGGGTCTTEEEEECC
T ss_pred -CCeecCCCeeEEEEEEcCCCC------------------------HHHHHHHHHHCCEEEeCccccCCCCeEEEEec
Confidence 777765433333666665321 12556667767765554333333468999985
No 174
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=99.12 E-value=1.9e-10 Score=100.55 Aligned_cols=194 Identities=9% Similarity=-0.055 Sum_probs=109.7
Q ss_pred ccEEEEEecCCCCccccc----ChhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCc-c
Q 048438 4 IPLFLCATIGTTAITAVD----PLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFAT-L 78 (239)
Q Consensus 4 ~p~~vv~t~gtt~~G~i~----pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P-~ 78 (239)
.+.+|++....+++|.+. ++++|.++|++||+++++|.+|.+.......+.....++ ..|.+ +++|++++. .
T Consensus 223 ~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~g~~g~~~~~~~~~~-~~Di~--t~sK~l~~G~~ 299 (439)
T 2oat_A 223 NVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTGRWLAVDYENV-RPDIV--LLGKALSGGLY 299 (439)
T ss_dssp TEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTC-CCSEE--EECGGGGTTSS
T ss_pred CEEEEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCcchhHHHhCC-CCcEE--EecccccCCCC
Confidence 356677766666789876 799999999999999999999964211111010012233 37877 556998764 3
Q ss_pred cceEEEeeCcccccccccCCCCccCCCCceecCCCCCChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCCCCeEE
Q 048438 79 DCCCLWATNPEYLKNKATESKPVVDYKDWQITLSRSFRSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSGDKRFEV 158 (239)
Q Consensus 79 g~g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~~ 158 (239)
..|+++.++ +......... ...++ .+..........+++.+..+ +..++..++.+++.+.|+++ ++.+
T Consensus 300 ~~G~v~~~~-~~~~~l~~~~------~~~t~-~~~~~~~aaa~aal~~~~~~---~~~~~~~~~~~~l~~~L~~l-~~~~ 367 (439)
T 2oat_A 300 PVSAVLCDD-DIMLTIKPGE------HGSTY-GGNPLGCRVAIAALEVLEEE---NLAENADKLGIILRNELMKL-PSDV 367 (439)
T ss_dssp CCEEEEECH-HHHTTSCTTS------SCCSS-TTCHHHHHHHHHHHHHHHHT---THHHHHHHHHHHHHHHHTTS-CTTT
T ss_pred CeEEEEECH-HHHhccCCCC------cccCC-CcCHHHHHHHHHHHHHHhhh---hHHHHHHHHHHHHHHHHHHh-cCCC
Confidence 488888753 4333221100 00111 11112222333445544322 45566778999999999886 4332
Q ss_pred Ec--CCCeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhcCcEEEEEEEECCEeEEEEEecCCCCC
Q 048438 159 VF--PCHFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINASGKAYMTNVVLGGIYAIRFATGATLTE 236 (239)
Q Consensus 159 ~~--~~~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~ 236 (239)
+. ++..+++.+.++.... .....+.+.|.++|..... .+..++|+++....|+
T Consensus 368 ~~~~~~~g~~~~v~l~~~~~---------------------~~~~~l~~~l~~~Gv~v~~----~~~~~iRi~~~~~~t~ 422 (439)
T 2oat_A 368 VTAVRGKGLLNAIVIKETKD---------------------WDAWKVCLRLRDNGLLAKP----THGDIIRFAPPLVIKE 422 (439)
T ss_dssp EEEEEEETTEEEEEECCCSS---------------------CCHHHHHHHHHHTTEECCB----SSSSEEEECCCTTCCH
T ss_pred cEEEEeeeeEEEEEEecCcc---------------------HHHHHHHHHHHHCCeEEec----CCCCEEEEECccCCCH
Confidence 21 2344677777754210 0012566777777655432 3467899997655554
Q ss_pred c
Q 048438 237 E 237 (239)
Q Consensus 237 ~ 237 (239)
+
T Consensus 423 e 423 (439)
T 2oat_A 423 D 423 (439)
T ss_dssp H
T ss_pred H
Confidence 3
No 175
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.12 E-value=1.8e-10 Score=98.01 Aligned_cols=139 Identities=10% Similarity=0.051 Sum_probs=81.4
Q ss_pred CCCCcccccChhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEc--CcccCCCcccceEEEeeCccc
Q 048438 13 GTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLN--AHKWFFATLDCCCLWATNPEY 90 (239)
Q Consensus 13 gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~--~hK~l~~P~g~g~l~~~~~~~ 90 (239)
.++.+|...|+++|.++|+++|+++|+|++|+.|...-. + ..+. ..|++++| +||+++++...|+++.+++..
T Consensus 129 ~~~~~G~~~~~~~i~~la~~~~~~li~D~a~~~g~~~~~--~--~~~~-~~di~~~Sf~~~K~l~~~g~gg~~~~~~~~l 203 (367)
T 3nyt_A 129 PVSLYGQCADFDAINAIASKYGIPVIEDAAQSFGASYKG--K--RSCN-LSTVACTSFFPSAPLGCYGDGGAIFTNDDEL 203 (367)
T ss_dssp CBCGGGCCCCHHHHHHHHHHTTCCBEEECTTTTTCEETT--E--ETTS-SSSEEEEECCTTSSSCCSSCCEEEEESCHHH
T ss_pred eeCCccChhhHHHHHHHHHHcCCEEEEECccccCCeECC--e--eccC-CCCEEEEECCCCCcCCCcCceeEEEeCCHHH
Confidence 567899999999999999999999999999987654211 1 1111 12788887 599987644456666555433
Q ss_pred cccccc--CCCCccCCCCceecCCCCCChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEE
Q 048438 91 LKNKAT--ESKPVVDYKDWQITLSRSFRSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSGDKRFEVV 159 (239)
Q Consensus 91 l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~~~ 159 (239)
...... ..+....+.........+...+..+.++.. .+.+++..++..++++++.+.|++. ++++.
T Consensus 204 ~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~~--l~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~ 271 (367)
T 3nyt_A 204 ATAIRQIARHGQDRRYHHIRVGVNSRLDTLQAAILLPK--LEIFEEEIALRQKVAAEYDLSLKQV-GIGTP 271 (367)
T ss_dssp HHHHHHHTBTTEEETTEECSCCCBCCCCHHHHHHHHHH--HHTHHHHHHHHHHHHHHHHHHHHHT-TCCCC
T ss_pred HHHHHHHHhcCCCcCceeeccCcCCCccHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhccC-Ceecc
Confidence 221110 000000000000001122333444333333 2345667777889999999999987 55543
No 176
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=99.11 E-value=4.2e-10 Score=96.69 Aligned_cols=193 Identities=12% Similarity=0.052 Sum_probs=104.2
Q ss_pred cEEEEEecCCCCccc-----ccChhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCccc
Q 048438 5 PLFLCATIGTTAITA-----VDPLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATLD 79 (239)
Q Consensus 5 p~~vv~t~gtt~~G~-----i~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g 79 (239)
+.+|+++ ..+.+|. .+++++|.++|++||+++|+|.+|++.............++ ..|++++ +|++++...
T Consensus 184 ~~~v~~~-p~np~g~~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~-~~d~~t~--sK~~~~G~r 259 (406)
T 4adb_A 184 TCAVIVE-PIQGEGGVVPASNAFLQGLRELCNRHNALLIFDEVQTGVGRTGELYAYMHYGV-TPDLLTT--AKALGGGFP 259 (406)
T ss_dssp EEEEEEC-SEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTC-CCSEEEE--CGGGGTTSC
T ss_pred eEEEEEe-CCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhHHHHhcCC-CCCEEEe--chhhcCCCC
Confidence 4566666 4555664 35799999999999999999999973211111111011233 2788865 999884445
Q ss_pred ceEEEeeCcccccccccCCCCccCCCCceecCCCCCChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCCCC-eEE
Q 048438 80 CCCLWATNPEYLKNKATESKPVVDYKDWQITLSRSFRSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSGDKR-FEV 158 (239)
Q Consensus 80 ~g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g-~~~ 158 (239)
+|+++.+ ++......... ...+. ............+++.+.. ++..++..++++++.+.|++... +.+
T Consensus 260 ~G~~~~~-~~~~~~~~~~~------~~~~~-~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~ 328 (406)
T 4adb_A 260 VGALLAT-EECARVMTVGT------HGTTY-GGNPLASAVAGKVLELINT---PEMLNGVKQRHDWFVERLNTINHRYGL 328 (406)
T ss_dssp CEEEEEC-HHHHHTCCTTS------SCCSS-TTCHHHHHHHHHHHHHHSS---HHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred eEEEEEc-HHHHhhhccCC------cCCCC-CCCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 8887764 33332221100 00000 0111112223334444332 45556666888888888876411 111
Q ss_pred Ec--CCCeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhcCcEEEEEEEECCEeEEEEEecCCCCC
Q 048438 159 VF--PCHFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINASGKAYMTNVVLGGIYAIRFATGATLTE 236 (239)
Q Consensus 159 ~~--~~~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~ 236 (239)
.. +...+++.|.++.... .....+.+.|.++|..+.. .+..++|+++....|.
T Consensus 329 ~~~~~~~g~~~~~~~~~~~~---------------------~~~~~~~~~l~~~gi~v~~----~~~~~iRi~~~~~~~~ 383 (406)
T 4adb_A 329 FSEVRGLGLLIGCVLNADYA---------------------GQAKQISQEAAKAGVMVLI----AGGNVVRFAPALNVSE 383 (406)
T ss_dssp EEEEEEETTEEEEEECTTTT---------------------TCHHHHHHHHHHTTEECEE----SSTTEEEECCCTTCCH
T ss_pred ceEEEEEEEEEEEEEeCCcH---------------------HHHHHHHHHHHHCCcEEee----cCCCeEEEECCCCCCH
Confidence 11 1234577787765210 0122566777777655443 3467899986655554
Q ss_pred c
Q 048438 237 E 237 (239)
Q Consensus 237 ~ 237 (239)
+
T Consensus 384 e 384 (406)
T 4adb_A 384 E 384 (406)
T ss_dssp H
T ss_pred H
Confidence 3
No 177
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=99.11 E-value=1.4e-09 Score=94.25 Aligned_cols=186 Identities=15% Similarity=0.013 Sum_probs=105.3
Q ss_pred ccEEEEEecCCCCcccccC----hhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCc-c
Q 048438 4 IPLFLCATIGTTAITAVDP----LKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFAT-L 78 (239)
Q Consensus 4 ~p~~vv~t~gtt~~G~i~p----l~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P-~ 78 (239)
.+.+|+++...+++|.+.| +++|.++|++||+++|+|.+|+........+.....++ ..|.++ +.|.++++ .
T Consensus 212 ~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~DE~~~~~g~~g~~~~~~~~~~-~~d~~t--~sK~~~~G~~ 288 (419)
T 2eo5_A 212 EVAGIFFEPIQGEGGYVIPPKNFFAELQKLAKKYGILLVDDEVQMGLGRTGKLFAIENFNT-VPDVIT--LAKALGGGIM 288 (419)
T ss_dssp GEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTC-CCSEEE--ECGGGGTTTS
T ss_pred CEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCcchhhHHhcCC-CCCEEE--ecccccCCcc
Confidence 3456666666667898777 99999999999999999999974211111000001232 378775 45988866 7
Q ss_pred cceEEEeeCcccccccccCCCCccCCCCceecCCCCCChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCCCCeEE
Q 048438 79 DCCCLWATNPEYLKNKATESKPVVDYKDWQITLSRSFRSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSGDKRFEV 158 (239)
Q Consensus 79 g~g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~~ 158 (239)
.+|+++.++ +.+ .. .. ....+. ....+...+...+++.+ ++..++..++.+++.+.|+++ +..
T Consensus 289 riG~~~~~~-~~~-~~-~~------~~~~t~-~~n~~~~~aa~aal~~~-----~~~~~~~~~~~~~l~~~L~~~--~~~ 351 (419)
T 2eo5_A 289 PIGATIFRK-DLD-FK-PG------MHSNTF-GGNALACAIGSKVIDIV-----KDLLPHVNEIGKIFAEELQGL--ADD 351 (419)
T ss_dssp CCEEEEEEG-GGC-CC-------------CC-CCCHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHTTS--SSE
T ss_pred ceEEEEEch-Hhh-cC-Cc------ccCCCC-CCCHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHh--hhh
Confidence 788888754 333 22 10 000000 01111112222334322 225666778899999999875 222
Q ss_pred EcCCCeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhcCcEEEEEEEECCEeEEEEEecCCCCCc
Q 048438 159 VFPCHFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINASGKAYMTNVVLGGIYAIRFATGATLTEE 237 (239)
Q Consensus 159 ~~~~~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~ 237 (239)
+ ++..+++.+.+.+. ..... +.+.|.++|..+... +..++|+++....|++
T Consensus 352 ~-~~~g~~~~i~~~~~----------------------~~~~~-~~~~l~~~Gv~v~~~----~~~~lRis~~~~~t~e 402 (419)
T 2eo5_A 352 V-RGIGLAWGLEYNEK----------------------KVRDR-IIGESFKRGLLLLPA----GRSAIRVIPPLVISEE 402 (419)
T ss_dssp E-EEETTEEEEECSCH----------------------HHHHH-HHHHHHHTTEECEEE----TTTEEEECCCTTCCHH
T ss_pred e-EeeeEEEEEEEecC----------------------ccHHH-HHHHHHHCCCEEecC----CCCEEEEECCCCCCHH
Confidence 2 23456777766321 11234 667777666654432 3468999865555543
No 178
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=99.10 E-value=3.2e-10 Score=98.42 Aligned_cols=192 Identities=13% Similarity=0.043 Sum_probs=107.2
Q ss_pred cEEEEEecCCCCccc----ccChhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCcccc
Q 048438 5 PLFLCATIGTTAITA----VDPLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATLDC 80 (239)
Q Consensus 5 p~~vv~t~gtt~~G~----i~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~ 80 (239)
+.+|+++...+..|. .+++++|.++|++||+++++|.+|++.......+.....++ ..|++++ +|++++...+
T Consensus 202 ~~~vi~~p~~~~gG~~~~~~~~l~~l~~l~~~~gi~lI~Dev~~g~~~~g~~~~~~~~~~-~~diit~--sK~l~~G~~i 278 (420)
T 2pb2_A 202 TCAVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQCGMGRTGDLFAYMHYGV-TPDILTS--AKALGGGFPV 278 (420)
T ss_dssp EEEEEECSEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTC-CCSEEEE--CGGGGTTSCC
T ss_pred ceEEEEeCCcCCCCeecCCHHHHHHHHHHHHHcCCEEEEEcCCcCcccCCcHHHHHhcCC-CCCeEEe--cccccCCCce
Confidence 556666666666675 47799999999999999999999964211111010001233 3788754 7999866668
Q ss_pred eEEEeeCcccccccccCCCCccCCCCceecCCCCCChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCC----CCe
Q 048438 81 CCLWATNPEYLKNKATESKPVVDYKDWQITLSRSFRSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSGD----KRF 156 (239)
Q Consensus 81 g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~----~g~ 156 (239)
|++++++ +........ ....++ .+..........+++.+..+ +..++..++.+++.+.|+++ +.+
T Consensus 279 G~~~~~~-~l~~~l~~~------~~~~t~-~~~~~~~aa~~a~L~~~~~~---~~~~~~~~~~~~l~~~L~~~~~~~~~~ 347 (420)
T 2pb2_A 279 SAMLTTQ-EIASAFHVG------SHGSTY-GGNPLACAVAGAAFDIINTP---EVLQGIHTKRQQFVQHLQAIDEQFDIF 347 (420)
T ss_dssp EEEEECH-HHHTTCC----------CCEE-CCCHHHHHHHHHHHHHHSSH---HHHHHHHHHHHHHHHHHHHHHHHHCCE
T ss_pred EEEEEhH-HHHHhhcCC------CcCccc-CcCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHhcCCCe
Confidence 9888754 333322110 000111 11112223333445554433 45556668888888888764 333
Q ss_pred EEEcCCCeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhcCcEEEEEEEECCEeEEEEEecCCCCC
Q 048438 157 EVVFPCHFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINASGKAYMTNVVLGGIYAIRFATGATLTE 236 (239)
Q Consensus 157 ~~~~~~~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~ 236 (239)
..+ ++..+++.|.++.... .....+.+.|.++|.+... .+..++|+++....|.
T Consensus 348 ~~~-~~~g~~~~v~~~~~~~---------------------~~~~~l~~~l~~~Gi~v~~----~~~~~iRl~~~~~~t~ 401 (420)
T 2pb2_A 348 SDI-RGMGLLIGAELKPKYK---------------------GRARDFLYAGAEAGVMVLN----AGADVMRFAPSLVVEE 401 (420)
T ss_dssp EEE-EEETTEEEEEECGGGT---------------------TCHHHHHHHHHHTTEECEE----SSTTEEEECCCTTCCH
T ss_pred EEE-EecceEEEEEECCCch---------------------HHHHHHHHHHHHCCCEEEe----CCCCEEEEECCCCCCH
Confidence 322 2345677777753200 0122566677776655433 2356899997544443
No 179
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=99.10 E-value=2.4e-10 Score=98.41 Aligned_cols=161 Identities=11% Similarity=-0.022 Sum_probs=96.6
Q ss_pred ccEEEEEecCCCCcccc---cChhHHHHHHHHhCCEEEEecccccccccCcccccc--cCCCCCcceEEEcCcccCCCc-
Q 048438 4 IPLFLCATIGTTAITAV---DPLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHF--IDGVEGADSFSLNAHKWFFAT- 77 (239)
Q Consensus 4 ~p~~vv~t~gtt~~G~i---~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~--~~~~~~~Ds~~~~~hK~l~~P- 77 (239)
.+-+|+++..+|.+|.+ +++++|+++|++||+++++|.+|+............ .......+.++.+++|.++.|
T Consensus 167 ~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G 246 (410)
T 3e2y_A 167 KTKAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWERTITIGSAGKTFSVTG 246 (410)
T ss_dssp TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEEHHHHSSCGG
T ss_pred CceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEhhhhhcccCCCCCCCHHHcCCccCeEEEEecchhhcCCCC
Confidence 35677778889999998 679999999999999999999998644321111000 111112457888999998633
Q ss_pred ccceEEEeeCcccccccccCCCCccCCCCceecCCCCCChHHHHHHHHH------hCHHHHHHHHHHHHHHHHHHHHHHh
Q 048438 78 LDCCCLWATNPEYLKNKATESKPVVDYKDWQITLSRSFRSLKLWFVIRN------YGMENLRHFLRSHVNMARLFERLVS 151 (239)
Q Consensus 78 ~g~g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~------~g~~g~~~~~~~~~~la~~l~~~l~ 151 (239)
..+|+++.. ++.+...... .....+. ........+..+++. ...+.+++..++..++.+++.+.|+
T Consensus 247 ~r~G~~~~~-~~~~~~~~~~----~~~~~~~---~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 318 (410)
T 3e2y_A 247 WKLGWSIGP-AHLIKHLQTV----QQNSFYT---CATPLQAALAEAFWIDIKRMDDPECYFNSLPKELEVKRDRMVRLLN 318 (410)
T ss_dssp GCCEEEECC-HHHHHHHHHH----HHTTTCC---CCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEEC-HHHHHHHHHH----HHhhccC---CChHHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 447777653 3333222100 0000000 001111222233331 1234567777788899999999999
Q ss_pred CCCCeEEEcCCCeeEEEEEEcC
Q 048438 152 GDKRFEVVFPCHFAVVCFRVSP 173 (239)
Q Consensus 152 ~~~g~~~~~~~~~~iv~f~~~~ 173 (239)
+. |+++..+.....+.+.+..
T Consensus 319 ~~-g~~~~~~~~~~~~~~~~~~ 339 (410)
T 3e2y_A 319 SV-GLKPIVPDGGYFIIADVSS 339 (410)
T ss_dssp TT-TCEEEBCSBSSEEEEECGG
T ss_pred HC-CCeecCCCccEEEEEEchh
Confidence 87 8988766555666666653
No 180
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=99.10 E-value=2.5e-10 Score=99.15 Aligned_cols=191 Identities=13% Similarity=0.024 Sum_probs=113.6
Q ss_pred cEEEEEecCCCCcccccC---hhHHHHHHHHhCCEEEEecccccccccCcccccc--cCCCCCcceEEEcCcccCCC-cc
Q 048438 5 PLFLCATIGTTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHF--IDGVEGADSFSLNAHKWFFA-TL 78 (239)
Q Consensus 5 p~~vv~t~gtt~~G~i~p---l~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~--~~~~~~~Ds~~~~~hK~l~~-P~ 78 (239)
+-+|+++..+|.+|.+.| +++|+++|++||+++++|.+|+.+...-. .... ..+....++++.+++|.++. ..
T Consensus 199 ~~~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~li~Dea~~~~~~~~~-~~~~~~~~~~~~~~i~~~S~SK~~g~~G~ 277 (432)
T 3ei9_A 199 TDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDN-PRSIFEIPGAEEVAMETASFSNYAGFTGV 277 (432)
T ss_dssp CSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSC-CSSGGGSTTGGGTEEEEEESHHHHCTTTT
T ss_pred CCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEccchHhhccCCC-CCChhhcCCCCCeEEEEecchhccCCccc
Confidence 345666678899999865 66777779999999999999986543211 1111 11112367889999999863 33
Q ss_pred cceEEEeeCcccc--------cccccCCCCccCCCCceecCCCCCChHHHHHHHHHhC---HHHHHHHHHHHHHHHHHHH
Q 048438 79 DCCCLWATNPEYL--------KNKATESKPVVDYKDWQITLSRSFRSLKLWFVIRNYG---MENLRHFLRSHVNMARLFE 147 (239)
Q Consensus 79 g~g~l~~~~~~~l--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g---~~g~~~~~~~~~~la~~l~ 147 (239)
.+|++++.+ +.+ ..... ...........+...+++..+. .+.+++..++..++.+++.
T Consensus 278 r~G~~~~~~-~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~ 346 (432)
T 3ei9_A 278 RLGWTVIPK-KLLYSDGFPVAKDFNR----------IICTCFNGASNISQAGALACLTPEGLEAMHKVIGFYKENTNIII 346 (432)
T ss_dssp CCEEEECCT-TCBCTTSCBHHHHHHH----------HHHHSCCCSCHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEECh-HHhhcchHHHHHHHHH----------HhccccCCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 478777644 221 11100 0000000112233333333332 2446677788889999999
Q ss_pred HHHhCCCCeEEEcCCCeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhc-CcEEEEEEEE--CCEe
Q 048438 148 RLVSGDKRFEVVFPCHFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINAS-GKAYMTNVVL--GGIY 224 (239)
Q Consensus 148 ~~l~~~~g~~~~~~~~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~--~g~~ 224 (239)
+.|++. |+++..+...+.+.+.+++.. ...+.+.|.++ |..+.+.... .|..
T Consensus 347 ~~L~~~-g~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~ll~~~gv~v~~g~~f~~~~~~ 401 (432)
T 3ei9_A 347 DTFTSL-GYDVYGGKNAPYVWVHFPNQS------------------------SWDVFAEILEKTHVVTTPGSGFGPGGEG 401 (432)
T ss_dssp HHHHHT-TCCEEECSSSSEEEEECTTSC------------------------HHHHHHHHHHHHCEECEEGGGGCGGGTT
T ss_pred HHHHHC-CceecCCCcceEEEEECCCCC------------------------HHHHHHHHHHHCCEEEeCchHhCCCCCC
Confidence 999987 888876666777877776321 11445555555 5544433222 2467
Q ss_pred EEEEEecC
Q 048438 225 AIRFATGA 232 (239)
Q Consensus 225 ~lR~~~~~ 232 (239)
++|+++.+
T Consensus 402 ~iRis~~~ 409 (432)
T 3ei9_A 402 FVRVSAFG 409 (432)
T ss_dssp EEEEECCS
T ss_pred EEEEEecC
Confidence 89999754
No 181
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=99.10 E-value=4.9e-09 Score=91.82 Aligned_cols=198 Identities=12% Similarity=0.079 Sum_probs=107.0
Q ss_pred ccEEEEEecCCCCcccccC----hhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCccc
Q 048438 4 IPLFLCATIGTTAITAVDP----LKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATLD 79 (239)
Q Consensus 4 ~p~~vv~t~gtt~~G~i~p----l~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g 79 (239)
.+.+|++.-..++.|.+.| +++|.++|++||+++++|.+|.+.......+.....++ ..|.+++ .|.+++...
T Consensus 227 ~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~-~pdi~t~--sK~l~~G~~ 303 (451)
T 3oks_A 227 NLAAVVIEPIQGEGGFIVPADGFLPTLLDWCRKNDVVFIADEVQTGFARTGAMFACEHEGI-DPDLIVT--AKGIAGGLP 303 (451)
T ss_dssp GEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTC-CCSEEEE--CGGGGTTSS
T ss_pred CEEEEEEcCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCCccccchhhhhcCC-CCCeeee--hhhhhCCcc
Confidence 4567777777777888877 99999999999999999999974322111111112233 3787765 499877566
Q ss_pred ceEEEeeCcccccccccCCCCccCCCCceecCCCCCChHHHH---HHHHHhCHHHHHHHHHHHHHHHHHHHHHHhC----
Q 048438 80 CCCLWATNPEYLKNKATESKPVVDYKDWQITLSRSFRSLKLW---FVIRNYGMENLRHFLRSHVNMARLFERLVSG---- 152 (239)
Q Consensus 80 ~g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~---- 152 (239)
.|.++.+ ++........ ....+-....+... .+++.+..+ +..++..++.+++++.|.+
T Consensus 304 iG~v~~~-~~~~~~~~~~----------~~~~t~~~~~~~~aaa~aal~~~~~~---~~~~~~~~~~~~l~~~L~~~~~~ 369 (451)
T 3oks_A 304 LSAVTGR-AEIMDSPHVS----------GLGGTYGGNPIACAAALATIETIESE---GLVARAQQIEKIMKDRLGRLQAE 369 (451)
T ss_dssp CEEEEEE-HHHHTCSCTT----------SBCCSSSSCHHHHHHHHHHHHHHHHT---THHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEC-HHHHhhhcCC----------CcCCCCCCCHHHHHHHHHHHHHHhhh---hHHHHHHHHHHHHHHHHHHHHhh
Confidence 7877664 3433322110 00000011223333 334433222 3344445666666665543
Q ss_pred CCCeEEEcCCCeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhcCcEEEEEEEECCEeEEEEEecC
Q 048438 153 DKRFEVVFPCHFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINASGKAYMTNVVLGGIYAIRFATGA 232 (239)
Q Consensus 153 ~~g~~~~~~~~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~ 232 (239)
.+.+..+ +....++.+.+...... ..+ ......+.+.|.++|.++.+.. ....++|+++..
T Consensus 370 ~~~~~~~-~~~G~~~~~~~~~~~~~------------~~~----~~~~~~~~~~l~~~Gv~v~~~~--~~~~~iRi~~~~ 430 (451)
T 3oks_A 370 DDRIGDV-RGRGAMIAMELVKAGTT------------EPD----ADLTKALCAGAHAAGVIVLSCG--TYGNVVRFLPPL 430 (451)
T ss_dssp CTTEEEE-EEETTEEEEEEBSTTSC------------CBC----HHHHHHHHHHHHHTTEECEEEC--TTSCEEEECCCT
T ss_pred CCCeEEE-EEeeEEEEEEEecCccC------------CCC----HHHHHHHHHHHHhCCcEEecCC--CCCCEEEEECCC
Confidence 4444433 22344667776431100 001 1233467777888886655421 123689998766
Q ss_pred CCCCc
Q 048438 233 TLTEE 237 (239)
Q Consensus 233 ~~t~~ 237 (239)
..|++
T Consensus 431 ~~t~e 435 (451)
T 3oks_A 431 SIGDD 435 (451)
T ss_dssp TCCHH
T ss_pred CCCHH
Confidence 65544
No 182
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=99.09 E-value=2.5e-09 Score=89.72 Aligned_cols=181 Identities=10% Similarity=0.036 Sum_probs=110.2
Q ss_pred cEEEEEecCCCCcccccChhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCc-ccceEE
Q 048438 5 PLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFAT-LDCCCL 83 (239)
Q Consensus 5 p~~vv~t~gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P-~g~g~l 83 (239)
+-+|+++..+|.+|.+.|.+++.++++..| ++++|.+|+..... ........ ...++++.+++|+++.| ..+|++
T Consensus 139 ~~~v~l~~p~nptG~~~~~~~l~~l~~~~~-~li~De~~~~~~~~--~~~~~~~~-~~~~i~~~s~sK~~g~~G~r~G~~ 214 (335)
T 1uu1_A 139 GDVVFIPNPNNPTGHVFEREEIERILKTGA-FVALDEAYYEFHGE--SYVDFLKK-YENLAVIRTFSKAFSLAAQRVGYV 214 (335)
T ss_dssp TEEEEEESSCTTTCCCCCHHHHHHHHHTTC-EEEEECTTHHHHCC--CCGGGGGT-CSSEEEEEESTTTTTCGGGCCEEE
T ss_pred CCEEEEeCCCCCCCCCCCHHHHHHHHHhCC-EEEEECcchhhcch--hHHHHhhh-CCCEEEEecchhhcCCcccCeEEE
Confidence 456666778899999999999999999989 99999999853211 10111121 13678899999997633 236888
Q ss_pred EeeCcccccccccCCCCccCCCCceecCCCCCChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEcCCC
Q 048438 84 WATNPEYLKNKATESKPVVDYKDWQITLSRSFRSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSGDKRFEVVFPCH 163 (239)
Q Consensus 84 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~~~~~~~ 163 (239)
++ +++.+....... ..++ ........+..+++. .+.++++.++..++.+++.+.|++. |+++. ++.
T Consensus 215 ~~-~~~~~~~l~~~~------~~~~---~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~ 280 (335)
T 1uu1_A 215 VA-SEKFIDAYNRVR------LPFN---VSYVSQMFAKVALDH--REIFEERTKFIVEERERMKSALREM-GYRIT-DSR 280 (335)
T ss_dssp EE-CHHHHHHHHHHS------CTTC---SCHHHHHHHHHHHHT--HHHHHHHHHHHHHHHHHHHHHHHHH-TCCBC-CCC
T ss_pred Ee-CHHHHHHHHHhc------CCCC---cCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHHC-CcEEc-CCC
Confidence 87 444433221100 0010 000111222223332 2356777788889999999999886 77653 555
Q ss_pred eeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhcCcEEEEEEEECCEeEEEEEecC
Q 048438 164 FAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINASGKAYMTNVVLGGIYAIRFATGA 232 (239)
Q Consensus 164 ~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~ 232 (239)
.+.+.+.++. . + ...+.+.|.++|..... +..++|+++..
T Consensus 281 ~~~~~~~~~~--~--------------------~--~~~~~~~l~~~gi~v~~-----~~~~iRis~~~ 320 (335)
T 1uu1_A 281 GNFVFVFMEK--E--------------------E--KERLLEHLRTKNVAVRS-----FREGVRITIGK 320 (335)
T ss_dssp SSEEEEECCT--H--------------------H--HHHHHHHHHHHTEEEEE-----ETTEEEEECCC
T ss_pred CeEEEEECCC--C--------------------C--HHHHHHHHHHCCEEEEE-----CCCeEEEEeCC
Confidence 6677776643 0 1 12556667666655443 33579999753
No 183
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=99.08 E-value=5.4e-10 Score=97.12 Aligned_cols=206 Identities=13% Similarity=-0.003 Sum_probs=106.8
Q ss_pred ccEEEEEecCCCCcccccC----hhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCccc
Q 048438 4 IPLFLCATIGTTAITAVDP----LKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATLD 79 (239)
Q Consensus 4 ~p~~vv~t~gtt~~G~i~p----l~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g 79 (239)
.+.+|++....+++|.+.| +++|.++|++||+++++|.+|++.......+.....++ ..|.+++ .|++++...
T Consensus 203 ~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~g~~g~~~~~~~~~~-~~di~s~--sK~~~~G~~ 279 (433)
T 1zod_A 203 NLAAFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRTGTMFACQRDGV-TPDILTL--SKTLGAGLP 279 (433)
T ss_dssp CEEEEEECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTC-CCSEEEE--CHHHHTTSS
T ss_pred CeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCchHhHHhhcCC-CCCEEEe--cccccCCCC
Confidence 4456666555567898777 99999999999999999999984221111010001233 2677655 599887666
Q ss_pred ceEEEeeCcccccccccCCCCccCCCCceecCCCCCChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCC----CC
Q 048438 80 CCCLWATNPEYLKNKATESKPVVDYKDWQITLSRSFRSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSGD----KR 155 (239)
Q Consensus 80 ~g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~----~g 155 (239)
+|+++.++ +......... .. ...+. .+..+.......+++.+..+ +..++..++.+++.+.|+++ +.
T Consensus 280 ig~~~~~~-~~~~~~~~~~--~~--~~~t~-~~~~~~~~a~~aal~~~~~~---~~~~~~~~~~~~l~~~l~~l~~~~~~ 350 (433)
T 1zod_A 280 LAAIVTSA-AIEERAHELG--YL--FYTTH-VSDPLPAAVGLRVLDVVQRD---GLVARANVMGDRLRRGLLDLMERFDC 350 (433)
T ss_dssp CEEEEECH-HHHHHHHHTT--CC--CCCTT-TTCHHHHHHHHHHHHHHHHT---THHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred eeEEEEhH-HHHHhhccCC--CC--CCCCC-CcCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 88888753 3332221100 00 00000 01111122223344433222 34455567777777777653 44
Q ss_pred eEEEcCCCeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhcCcEEEEEEEECCEeEEEEEecCCCC
Q 048438 156 FEVVFPCHFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINASGKAYMTNVVLGGIYAIRFATGATLT 235 (239)
Q Consensus 156 ~~~~~~~~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t 235 (239)
+..+ ++..+++.+.++..... ...+ ......+.+.|.++|.++.......+..++|+++....|
T Consensus 351 ~~~~-~~~g~~~~i~~~~~~~~-----------~~~~----~~~~~~~~~~l~~~Gv~v~~~~~~~~~~~lRi~~~~~~t 414 (433)
T 1zod_A 351 IGDV-RGRGLLLGVEIVKDRRT-----------KEPA----DGLGAKITRECMNLGLSMNIVQLPGMGGVFRIAPPLTVS 414 (433)
T ss_dssp EEEE-EEETTEEEEEEEEETTT-----------TEEC----TTHHHHHHHHHHHTTEECCEECCTTSCCEEEECCCTTCC
T ss_pred eEEE-EEEEEEEEEEEecCccc-----------cCCC----hHHHHHHHHHHHHCCCeEeccCCCCCCCEEEEECCcCCC
Confidence 4332 33456677776531000 0000 011235667777777654433222223789998665555
Q ss_pred Cc
Q 048438 236 EE 237 (239)
Q Consensus 236 ~~ 237 (239)
++
T Consensus 415 ~~ 416 (433)
T 1zod_A 415 ED 416 (433)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 184
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=99.08 E-value=3.6e-09 Score=93.96 Aligned_cols=156 Identities=12% Similarity=0.036 Sum_probs=88.6
Q ss_pred CCccEEEEEecCCCCcccccC---hhHHHHHHHHhCCEEEEecccccccccCc-cccc---ccCCC----CCcc-eEEEc
Q 048438 2 GLIPLFLCATIGTTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSACIFP-EFRH---FIDGV----EGAD-SFSLN 69 (239)
Q Consensus 2 g~~p~~vv~t~gtt~~G~i~p---l~~i~~i~~~~gi~lhvD~A~~~~~~~~~-~~~~---~~~~~----~~~D-s~~~~ 69 (239)
|..|-+|+++..+|.||.+.+ +++|+++|++||+++++|.+|+.....-. .... ....+ +..+ ++..|
T Consensus 235 ~~~~k~ivl~~p~NPtG~~~s~~~l~~i~~la~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S 314 (500)
T 3tcm_A 235 GINVRALVVINPGNPTGQVLAEENQYDIVKFCKNEGLVLLADEVYQENIYVDNKKFHSFKKIVRSLGYGEEDLPLVSYQS 314 (500)
T ss_dssp TCEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTTCSSSCCCEEEEEE
T ss_pred CCCceEEEEECCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccccccCCCCCCCcHHHHHHHhccccCCeEEEEEec
Confidence 446777888888999999866 66777779999999999999986543211 0110 00111 1233 44569
Q ss_pred CcccCCCccc--ceEEEee--CcccccccccCCCCccCCCCceecCCCCCChHHHHHHHHHhC------------HHHHH
Q 048438 70 AHKWFFATLD--CCCLWAT--NPEYLKNKATESKPVVDYKDWQITLSRSFRSLKLWFVIRNYG------------MENLR 133 (239)
Q Consensus 70 ~hK~l~~P~g--~g~l~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g------------~~g~~ 133 (239)
++|.++++.| +|++.+. +++.+...... .....+ ........+...+. .+...
T Consensus 315 ~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~---------~~~~~~--~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~ 383 (500)
T 3tcm_A 315 VSKGYYGECGKRGGYFEITGFSAPVREQIYKI---------ASVNLC--SNITGQILASLVMNPPKASDESYASYKAEKD 383 (500)
T ss_dssp SSSTTTCCGGGCCEEEEEESCCTTHHHHHHHH---------HHTTCC--CCHHHHHHHHHHHSCCCSSSTHHHHHHHHHH
T ss_pred CCccCCCCCccceEEEEEeCCCHHHHHHHHHH---------HhcccC--CCHHHHHHHHHHhcCccccchhHHHHHHHHH
Confidence 9999844444 5666652 33333222100 000000 01111111111111 12345
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCeEEEcCCCeeEEEE
Q 048438 134 HFLRSHVNMARLFERLVSGDKRFEVVFPCHFAVVCF 169 (239)
Q Consensus 134 ~~~~~~~~la~~l~~~l~~~~g~~~~~~~~~~iv~f 169 (239)
++.++..++++++.+.|++++|+++. +++.++..|
T Consensus 384 ~~~~~l~~~~~~l~~~L~~~~g~~~~-~~~g~~~~~ 418 (500)
T 3tcm_A 384 GILASLARRAKALEHAFNKLEGITCN-EAEGAMYVF 418 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHTSTTEECC-CCCBTTEEC
T ss_pred HHHHHHHHHHHHHHHHHhcCCCcEEe-cCCeEEEEe
Confidence 56667778899999999998899876 555555544
No 185
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=99.08 E-value=5.3e-10 Score=95.07 Aligned_cols=186 Identities=11% Similarity=-0.005 Sum_probs=107.2
Q ss_pred cEEEEEecCCCCcccccC---hhHHHHHHHHhCCEEEEecccccccccCcccccccCC-------CCCcceEEEcCcccC
Q 048438 5 PLFLCATIGTTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDG-------VEGADSFSLNAHKWF 74 (239)
Q Consensus 5 p~~vv~t~gtt~~G~i~p---l~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~-------~~~~Ds~~~~~hK~l 74 (239)
+-+|+++..+|.+|.+.| +++|+++|++||+++++|.+|+....... ....... ....+.++.++||++
T Consensus 155 ~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~s~sK~~ 233 (376)
T 3ezs_A 155 VDLVILNSPNNPTGRTLSLEELISWVKLALKHDFILINDECYSEIYENTP-PPSLLEACMLAGNEAFKNVLVIHSLSKRS 233 (376)
T ss_dssp CSEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBSSSC-CCCHHHHHHHTTCTTCTTEEEEEESTTTT
T ss_pred CCEEEEcCCCCCcCCCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCC-CCCHHHccccccccccCcEEEEecchhcc
Confidence 345666778899999877 66777779999999999999987544221 1111100 124788999999998
Q ss_pred C-CcccceEEEeeCcccccccccCCCCccCCCCceecCCCCCChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCC
Q 048438 75 F-ATLDCCCLWATNPEYLKNKATESKPVVDYKDWQITLSRSFRSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSGD 153 (239)
Q Consensus 75 ~-~P~g~g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~ 153 (239)
+ ....+|+++. +++........ .....++ ........+..+++. .+.+++..++..++.+++.+.|+
T Consensus 234 g~~G~r~G~~~~-~~~~~~~~~~~----~~~~~~~---~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~-- 301 (376)
T 3ezs_A 234 SAPGLRSGFIAG-DSRLLEKYKAF----RAYLGYT---SANAIQKASEAAWLD--DRHAEFFRNIYANNLKLARKIFK-- 301 (376)
T ss_dssp TCGGGCCEEEEE-CHHHHHHHHHH----HTTTCCC---CCHHHHHHHHHHHHC--SHHHHHHHHHHHHHHHHHHHHST--
T ss_pred CCccceeEEEee-CHHHHHHHHHH----HhhhcCC---CChHHHHHHHHHHhC--cHHHHHHHHHHHHHHHHHHHHhc--
Confidence 5 3345677665 33333222110 0000000 001111222233332 23466777777888888888886
Q ss_pred CCeEEEcCCCeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHh-cCcEEEEEEEE----CCEeEEEE
Q 048438 154 KRFEVVFPCHFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINA-SGKAYMTNVVL----GGIYAIRF 228 (239)
Q Consensus 154 ~g~~~~~~~~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~----~g~~~lR~ 228 (239)
++. .+...+.+.+.++. ...+.+.|.+ .|..+.+.... .+..++|+
T Consensus 302 -~~~--~~~~~~~~~~~~~~--------------------------~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~iRi 352 (376)
T 3ezs_A 302 -NTL--IYPYSFYVYLPVQN--------------------------GENFAKTLYQNEGIITLPALYLGRNRIGADYVRL 352 (376)
T ss_dssp -TCC--CCSBSSEEEEECSC--------------------------HHHHHHHHHHHHCCBCEEGGGGCSTTTTTTEEEE
T ss_pred -CCC--CCCcceEEEEECCC--------------------------HHHHHHHHHHhCCEEEeCcHHhCCCCCCCCeEEE
Confidence 544 34445566666641 1155666666 56665443222 24578999
Q ss_pred EecC
Q 048438 229 ATGA 232 (239)
Q Consensus 229 ~~~~ 232 (239)
++..
T Consensus 353 s~~~ 356 (376)
T 3ezs_A 353 ALVY 356 (376)
T ss_dssp ECCS
T ss_pred EEcC
Confidence 9764
No 186
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=99.06 E-value=2.5e-09 Score=93.58 Aligned_cols=207 Identities=11% Similarity=0.011 Sum_probs=105.3
Q ss_pred ccEEEEEecC-CCCcccccC----hhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCc-
Q 048438 4 IPLFLCATIG-TTAITAVDP----LKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFAT- 77 (239)
Q Consensus 4 ~p~~vv~t~g-tt~~G~i~p----l~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P- 77 (239)
.+.+|++... .+ +|.+.| +++|.++|++||+++++|.+|.+.......+.....++ ..|.++++ |.+++.
T Consensus 215 ~~~~vi~ep~~~n-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~~~~~~~~-~~di~t~s--K~l~~G~ 290 (452)
T 3n5m_A 215 TIAAFIMEPIITG-GGILMAPQDYMKAVHETCQKHGALLISDEVICGFGRTGKAFGFMNYDV-KPDIITMA--KGITSAY 290 (452)
T ss_dssp GEEEEEECSSBTT-TTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTC-CCSEEEEC--GGGGTTS
T ss_pred CEEEEEEccccCC-CCeeeCCHHHHHHHHHHHHHcCCEEEEecchhCCCcccccchhhhcCC-CCCEEeec--ccccCCC
Confidence 4566777766 68 999887 99999999999999999999874321111111112233 27877754 887665
Q ss_pred ccceEEEeeCcccccccccCCCCccCCCCceecCCCCCChHHHH---HHHHHhCHHHHHHHHHHHHHHHHHHHHHHh---
Q 048438 78 LDCCCLWATNPEYLKNKATESKPVVDYKDWQITLSRSFRSLKLW---FVIRNYGMENLRHFLRSHVNMARLFERLVS--- 151 (239)
Q Consensus 78 ~g~g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~l~~~g~~g~~~~~~~~~~la~~l~~~l~--- 151 (239)
...|+++.++ +......... ....+....+-....+... .+++.+..+ +..++..++.+++++.|.
T Consensus 291 ~~ig~~~~~~-~i~~~~~~~~----~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~---~~~~~~~~~~~~l~~~L~~~~ 362 (452)
T 3n5m_A 291 LPLSATAVKR-EIYEAFKGKG----EYEFFRHINTFGGNPAACALALKNLEIIENE---NLIERSAQMGSLLLEQLKEEI 362 (452)
T ss_dssp SCCEEEEEEH-HHHGGGCSSS----TTCSCCCCCSSTTCHHHHHHHHHHHHHHHHT---THHHHHHHHHHHHHHHHHHHH
T ss_pred cceEEEEECH-HHHHHHhhcc----CCCCccccCCCCCCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHH
Confidence 5678777643 3333221100 0000000001111223333 334433222 334444556666666554
Q ss_pred -CCCCeEEEcCCCeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhcCcEEEEEEE--ECCEeEEEE
Q 048438 152 -GDKRFEVVFPCHFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINASGKAYMTNVV--LGGIYAIRF 228 (239)
Q Consensus 152 -~~~g~~~~~~~~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~--~~g~~~lR~ 228 (239)
+.+.+..+ ++...++.+.+...... ...-+ ......+.+.|.++|.++..... ..+..++|+
T Consensus 363 ~~~~~~~~~-~~~g~~~~i~~~~~~~~----------~~~~~----~~~~~~~~~~l~~~Gv~~~~~~~~~~~~~~~iRi 427 (452)
T 3n5m_A 363 GEHPLVGDI-RGKGLLVGIELVNDKET----------KEPID----NDKIASVVNACKEKGLIIGRNGMTTAGYNNILTL 427 (452)
T ss_dssp TTCTTEEEE-EESSSCEEEEEEEETTT----------TEECC----HHHHHHHHHHHHHTTEECEECTTSSTTCCCEEEE
T ss_pred hcCCCeEEE-EEEEEEEEEEEecCCcc----------cCCCC----HHHHHHHHHHHHHCCcEEeecCcccCCCCCEEEE
Confidence 44555433 23334555555321100 00001 11223567777778766544211 112578999
Q ss_pred EecCCCCCc
Q 048438 229 ATGATLTEE 237 (239)
Q Consensus 229 ~~~~~~t~~ 237 (239)
++....|++
T Consensus 428 ~~~~~~t~e 436 (452)
T 3n5m_A 428 APPLVISSE 436 (452)
T ss_dssp CCCTTCCHH
T ss_pred ECCCCCCHH
Confidence 877666554
No 187
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=99.06 E-value=1.6e-10 Score=101.19 Aligned_cols=162 Identities=14% Similarity=0.026 Sum_probs=96.9
Q ss_pred ccEEEEEecCCCCccccc---ChhHHHHHHHHhCCEEEEecccccccccCc--ccccccCCCCCcceEEEcCcccCCCc-
Q 048438 4 IPLFLCATIGTTAITAVD---PLKPLCDVAKQFGIWVHVDAAYAGSACIFP--EFRHFIDGVEGADSFSLNAHKWFFAT- 77 (239)
Q Consensus 4 ~p~~vv~t~gtt~~G~i~---pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~--~~~~~~~~~~~~Ds~~~~~hK~l~~P- 77 (239)
.+-+|+++..+|.+|.+. ++++|+++|++||+++++|.+|+......+ .......+....|+++.++||+++.|
T Consensus 201 ~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G 280 (447)
T 3b46_A 201 KTKAVIINTPHNPIGKVFTREELTTLGNICVKHNVVIISDEVYEHLYFTDSFTRIATLSPEIGQLTLTVGSAGKSFAATG 280 (447)
T ss_dssp TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCHHHHTTEEEEEEHHHHTTCTT
T ss_pred CCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCcEEEEeccchhcccCCCCcCHHHcCCCCCCcEEEEecCchhcCCcc
Confidence 356677788889999984 699999999999999999999986433111 00000001113899999999997633
Q ss_pred ccceEEEeeCcccccccccCCCCccCCCCceecCCCCCChHHHHHHHHHhC-HHHHHHHHHHHHHHHHHHHHHHhCCCCe
Q 048438 78 LDCCCLWATNPEYLKNKATESKPVVDYKDWQITLSRSFRSLKLWFVIRNYG-MENLRHFLRSHVNMARLFERLVSGDKRF 156 (239)
Q Consensus 78 ~g~g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g-~~g~~~~~~~~~~la~~l~~~l~~~~g~ 156 (239)
.-+|+++..+++.+...... .....++ ........+..+++... .+.+++..++..++.+++.+.|++. |+
T Consensus 281 ~riG~~~~~~~~l~~~l~~~----~~~~~~~---~~~~~~~a~~~aL~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~ 352 (447)
T 3b46_A 281 WRIGWVLSLNAELLSYAAKA----HTRICFA---SPSPLQEACANSINDALKIGYFEKMRQEYINKFKIFTSIFDEL-GL 352 (447)
T ss_dssp SCCEEEECSCHHHHHHHHHH----HHHHTSS---CCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHH-TC
T ss_pred hhhEEEEeCCHHHHHHHHHH----HhhccCC---CChHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHHHHHHHHC-CC
Confidence 22788876344443322100 0000000 00111122223343321 2345667777888999999999886 88
Q ss_pred EEEcCCCeeEEEEEEcC
Q 048438 157 EVVFPCHFAVVCFRVSP 173 (239)
Q Consensus 157 ~~~~~~~~~iv~f~~~~ 173 (239)
++..+.....+.+.++.
T Consensus 353 ~~~~~~~g~~~~~~~~~ 369 (447)
T 3b46_A 353 PYTAPEGTYFVLVDFSK 369 (447)
T ss_dssp CEECCSBSSEEEEECTT
T ss_pred eecCCCeeEEEEEeccc
Confidence 87755445566777754
No 188
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=99.05 E-value=2.5e-09 Score=93.36 Aligned_cols=202 Identities=14% Similarity=0.060 Sum_probs=107.0
Q ss_pred ccEEEEEecCCCCcccccC----hhHHHHHHHHhCCEEEEecccc-cccccCcccccccCCCCCcceEEEcCcccCCCc-
Q 048438 4 IPLFLCATIGTTAITAVDP----LKPLCDVAKQFGIWVHVDAAYA-GSACIFPEFRHFIDGVEGADSFSLNAHKWFFAT- 77 (239)
Q Consensus 4 ~p~~vv~t~gtt~~G~i~p----l~~i~~i~~~~gi~lhvD~A~~-~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P- 77 (239)
.+.+|+++...+++|.+.| +++|.++|++||+++++|.+|+ .+... ..+.....++ ..|++++ +|++++-
T Consensus 219 ~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g-~~~~~~~~~~-~~di~s~--sK~l~~G~ 294 (449)
T 3a8u_X 219 NIAAVFVEPLAGSAGVLVPPEGYLKRNREICNQHNILLVFDEVITGFGRTG-SMFGADSFGV-TPDLMCI--AKQVTNGA 294 (449)
T ss_dssp GEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTS-SSSHHHHHTC-CCSEEEE--CGGGGTTS
T ss_pred CEEEEEEcCccCCCCCccCCHHHHHHHHHHHHHhCCEEEEeccccCccccC-cchhhhhcCC-CCCEEEE--cccccCCC
Confidence 4567777766677999888 9999999999999999999995 33211 1000001233 2787755 5998741
Q ss_pred ccceEEEeeCcccccccccCCCCccCCCCceecCCCCCChHH---HHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 048438 78 LDCCCLWATNPEYLKNKATESKPVVDYKDWQITLSRSFRSLK---LWFVIRNYGMENLRHFLRSHVNMARLFERLVSGDK 154 (239)
Q Consensus 78 ~g~g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~ 154 (239)
...|++++++ +.+......... .....+....+-....+. ...+++.+..+ +..++..++.+++++.|++++
T Consensus 295 ~~~G~~~~~~-~~~~~l~~~~~~-~~~~~~~~~~t~~~~~~~~aa~~aal~~~~~~---~~~~~~~~~~~~l~~~L~~l~ 369 (449)
T 3a8u_X 295 IPMGAVIAST-EIYQTFMNQPTP-EYAVEFPHGYTYSAHPVACAAGLAALCLLQKE---NLVQSVAEVAPHFEKALHGIK 369 (449)
T ss_dssp SCCEEEEEEH-HHHHHHHTCSSC-TTSCSSCCCCTTTTCHHHHHHHHHHHHHHHHT---THHHHHHHHHHHHHHHHHTTT
T ss_pred CceEEEEECH-HHHHHhhccCcc-cccccccccCCCcccHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHh
Confidence 2278887753 333222110000 000000000000112222 23344433222 455667788889999998743
Q ss_pred CeEEEc--CCCeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhcCcEEEEEEEECCEeEEEEEecC
Q 048438 155 RFEVVF--PCHFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINASGKAYMTNVVLGGIYAIRFATGA 232 (239)
Q Consensus 155 g~~~~~--~~~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~ 232 (239)
++.++. ++..+++.+.++.... .. .. -...+.+.|.++|.++... | .++|+++..
T Consensus 370 ~~~~~~~~~~~g~~~~i~~~~~~~---------------~~-~~--~~~~~~~~l~~~Gv~v~~~----g-~~iRis~~~ 426 (449)
T 3a8u_X 370 GAKNVIDIRNFGLAGAIQIAPRDG---------------DA-IV--RPFEAGMALWKAGFYVRFG----G-DTLQFGPTF 426 (449)
T ss_dssp TSTTEEEEEEETTEEEEEECCBTT---------------BS-SH--HHHHHHHHHHHHTEECEEE----T-TEEEECCCT
T ss_pred cCCCeEEEeeeEEEEEEEEecCcc---------------cc-cc--cHHHHHHHHHHCCcEEecC----C-CEEEEECCC
Confidence 332211 2345678888764210 00 00 0114666676666554432 3 689999765
Q ss_pred CCCCc
Q 048438 233 TLTEE 237 (239)
Q Consensus 233 ~~t~~ 237 (239)
..|++
T Consensus 427 ~~t~~ 431 (449)
T 3a8u_X 427 NSKPQ 431 (449)
T ss_dssp TCCHH
T ss_pred cCCHH
Confidence 55543
No 189
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=99.05 E-value=1.2e-09 Score=94.54 Aligned_cols=164 Identities=11% Similarity=0.073 Sum_probs=102.7
Q ss_pred ccEEEEEecCCCCcccccChhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCcccceEE
Q 048438 4 IPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCL 83 (239)
Q Consensus 4 ~p~~vv~t~gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l 83 (239)
+|-+| .+|.+..-...|++++.+||++.|++|++|.||-+|.+....+..-+. .||+++.+.||.|.+|.| |++
T Consensus 203 kPklI--i~G~SaY~r~id~~~~reIAd~vGA~Lm~DmAHiaGLVA~g~~psP~~---~ADvVTtTTHKTLrGPrG-G~I 276 (490)
T 3ou5_A 203 RPRLI--IAGTSAYARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFK---HADIVTTTTHKTLRGARS-GLI 276 (490)
T ss_dssp CCSEE--EECCSSCCSCCCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGG---TCSEEEEESSSTTCSCSC-EEE
T ss_pred CCCeE--EECCccCccccCHHHHHHHHhhcccEEEechhhhhhhhcccccCCccc---cceEEeccccccccCCCc-eEE
Confidence 34444 356667777889999999999999999999999888765543332233 499999999999999996 566
Q ss_pred EeeCcc-cccccccCCCCccCCC---C----ceecCCCCCC-hHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 048438 84 WATNPE-YLKNKATESKPVVDYK---D----WQITLSRSFR-SLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSGDK 154 (239)
Q Consensus 84 ~~~~~~-~l~~~~~~~~~~~~~~---~----~~~~~~~~~~-~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~ 154 (239)
++++.. ....... .....++. + -..+++--.. ..+...+++..-...++++.++..++|+.|.+.|.+.
T Consensus 277 l~~~~~~~~~~k~~-~~~~~~~~kkin~aVFPg~qggp~~h~IAAkAVaf~Ea~~p~fk~Ya~qVv~NAkaLA~~L~~~- 354 (490)
T 3ou5_A 277 FYRKGVKAVDPKTG-REIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADALLER- 354 (490)
T ss_dssp EEECSEEEECC--C-CEEECCCHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT-
T ss_pred Eecccccccccccc-chhHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHhC-
Confidence 665421 0000000 00000000 0 0112222211 2233333433223456788888999999999999986
Q ss_pred CeEEEcC-CCeeEEEEEEcCCC
Q 048438 155 RFEVVFP-CHFAVVCFRVSPLP 175 (239)
Q Consensus 155 g~~~~~~-~~~~iv~f~~~~~~ 175 (239)
|++++.. .+..++.+.+.+.+
T Consensus 355 G~~vvsGgTdnHlvLvDl~~~g 376 (490)
T 3ou5_A 355 GYSLVSGGTDNHLVLVDLRPKG 376 (490)
T ss_dssp TCEEGGGSCSSSEEEEECGGGT
T ss_pred CCeeecCCCCceEEEEeccccC
Confidence 9999863 45667777776543
No 190
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=99.03 E-value=6.2e-09 Score=90.30 Aligned_cols=194 Identities=11% Similarity=0.087 Sum_probs=108.1
Q ss_pred cEEEEE-ecCCCCcccccChh---HHHHHHHHhCCEEEEecccccccccCc---ccccccCCCCCcceEEEcCcccCCCc
Q 048438 5 PLFLCA-TIGTTAITAVDPLK---PLCDVAKQFGIWVHVDAAYAGSACIFP---EFRHFIDGVEGADSFSLNAHKWFFAT 77 (239)
Q Consensus 5 p~~vv~-t~gtt~~G~i~pl~---~i~~i~~~~gi~lhvD~A~~~~~~~~~---~~~~~~~~~~~~Ds~~~~~hK~l~~P 77 (239)
+-+|++ ...+|.||.+.|.+ +|+++|++||+++++|.+|+....... .... +.. ...++++.+++|+++ |
T Consensus 191 ~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~li~De~~~~~~~~g~~~~~~~~-~~~-~~~~i~~~s~SK~~~-~ 267 (425)
T 2r2n_A 191 PKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNKFRVPTFLS-MDV-DGRVIRADSFSKIIS-S 267 (425)
T ss_dssp CSEEEECCSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSSCCCCTGG-GCT-TSCEEEEEESTTTTC-S
T ss_pred ceEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCcccccCCCCCCCCccc-cCC-CCCEEEEccchhhcc-C
Confidence 445544 57789999998866 999999999999999999985432111 1111 111 125688899999986 4
Q ss_pred cc--ceEEEeeCcccccccccCCCCccCCCCceecCCCCCChHHHHHHHHHhCH----HHHHHHHHHHHHHHHHHHHHHh
Q 048438 78 LD--CCCLWATNPEYLKNKATESKPVVDYKDWQITLSRSFRSLKLWFVIRNYGM----ENLRHFLRSHVNMARLFERLVS 151 (239)
Q Consensus 78 ~g--~g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~----~g~~~~~~~~~~la~~l~~~l~ 151 (239)
| +|+++..+ +.+...... .....++ ...+....+..+++.++. +.+++..++..+..+++.+.|+
T Consensus 268 -GlRiG~~~~~~-~l~~~l~~~----~~~~~~~---~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 338 (425)
T 2r2n_A 268 -GLRIGFLTGPK-PLIERVILH----IQVSTLH---PSTFNQLMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAAD 338 (425)
T ss_dssp -TTCCEEEEEEH-HHHHHHHHH----HHTTTCS---SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -ccceEEEecCH-HHHHHHHHH----HHHhcCC---CCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4 68887743 333222100 0000000 001111222233443222 2344455566677888888887
Q ss_pred C-CCCeE-EEcCCCeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhcCcEEEEEEEEC-----CEe
Q 048438 152 G-DKRFE-VVFPCHFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINASGKAYMTNVVLG-----GIY 224 (239)
Q Consensus 152 ~-~~g~~-~~~~~~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~-----g~~ 224 (239)
+ .+++. +..+...+.+.+.++.... . .+ .+.+.|.+.|..+....... +..
T Consensus 339 ~~~~~~~~~~~p~~g~~~~~~~~~~~~---------------~----~~---~~~~~l~~~gv~v~pg~~f~~~~~~~~~ 396 (425)
T 2r2n_A 339 KWLTGLAEWHVPAAGMFLWIKVKGIND---------------V----KE---LIEEKAVKMGVLMLPGNAFYVDSSAPSP 396 (425)
T ss_dssp HHCSSSEEECCCSBSSEEEEEETTCSC---------------C----HH---HHHTHHHHTTEECEEGGGGSSSTTSCCC
T ss_pred HHCCCCeEEeCCCceEEEEEEeCCCCC---------------H----HH---HHHHHHHHCCcEEechhhhcCCCCCCCC
Confidence 7 57764 4444455667777764210 0 11 23455666666555433221 347
Q ss_pred EEEEEecC
Q 048438 225 AIRFATGA 232 (239)
Q Consensus 225 ~lR~~~~~ 232 (239)
++|+++..
T Consensus 397 ~iRis~~~ 404 (425)
T 2r2n_A 397 YLRASFSS 404 (425)
T ss_dssp EEEEECSS
T ss_pred EEEEEeCC
Confidence 89999773
No 191
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=99.03 E-value=8.6e-10 Score=94.89 Aligned_cols=155 Identities=12% Similarity=-0.068 Sum_probs=90.2
Q ss_pred cEEEEEecCCCCcccccC---hhHHHHHHHHhCCEEEEecccccccccCcccccccCCCC---CcceEEEcCcccCCCc-
Q 048438 5 PLFLCATIGTTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVE---GADSFSLNAHKWFFAT- 77 (239)
Q Consensus 5 p~~vv~t~gtt~~G~i~p---l~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~---~~Ds~~~~~hK~l~~P- 77 (239)
+-+|+++..+|.+|.+.| +++|+++|+++|+++++|.+|+.....- .....+..++ ..++++.+++|+++.|
T Consensus 164 ~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G 242 (400)
T 3asa_A 164 IDILCLCSPNNPTGTVLNKDQLRAIVHYAIEHEILILFDAAYSTFISDP-SLPKSIFEIPDARFCAIEINSFSKPLGFAG 242 (400)
T ss_dssp CSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGCCCT-TSCSSGGGSTTGGGTEEEEEECCGGGTTTT
T ss_pred ccEEEEeCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEchhhhhhcCC-CCCCchhhCCCCCCceEEEecchhhcCCcc
Confidence 445666678899999988 5678899999999999999998432211 0000011221 1457889999997633
Q ss_pred ccceEEEeeCcccc-------cccccCCCCccCCCCceecCCCC-CChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH
Q 048438 78 LDCCCLWATNPEYL-------KNKATESKPVVDYKDWQITLSRS-FRSLKLWFVIRNYGMENLRHFLRSHVNMARLFERL 149 (239)
Q Consensus 78 ~g~g~l~~~~~~~l-------~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~ 149 (239)
..+|++++.+ +.. ...... .......+.. .....+..+++.. .+++..++..++.+++.+.
T Consensus 243 lriG~~~~~~-~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~l~~~ 311 (400)
T 3asa_A 243 IRLGWTVIPQ-ELTYADGHFVIQDWER-------FLSTTFNGASIPAQEAGVAGLSIL---PQLEAIHYYRENSDLLRKA 311 (400)
T ss_dssp CCCEEEECCT-TCBCTTSCBHHHHHHH-------HHHHHCCCCCHHHHHHHHHHHHHT---TTCHHHHHHHHHHHHHHHH
T ss_pred hheeEEeeCh-hhccchhhhHHHHHHH-------HhccCccCCChHHHHHHHHHhCcH---HHHHHHHHHHHHHHHHHHH
Confidence 2368887643 331 111000 0000000111 1112222233321 3455666677888999999
Q ss_pred HhCCCCeEEEcCCCeeEEEEE-Ec
Q 048438 150 VSGDKRFEVVFPCHFAVVCFR-VS 172 (239)
Q Consensus 150 l~~~~g~~~~~~~~~~iv~f~-~~ 172 (239)
|++. |+++..+...+.+.+. ++
T Consensus 312 L~~~-g~~~~~~~~~~~~~~~~~~ 334 (400)
T 3asa_A 312 LLAT-GFEVFGGEHAPYLWVKPTQ 334 (400)
T ss_dssp HHHT-TCEEEECSSSSEEEEECCC
T ss_pred HHHC-CCeeeCCCCceEEEEeccC
Confidence 9886 8888765556777777 54
No 192
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=99.03 E-value=6.5e-09 Score=91.14 Aligned_cols=198 Identities=11% Similarity=-0.006 Sum_probs=105.7
Q ss_pred ccEEEEEecCCCCcccccC----hhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCccc
Q 048438 4 IPLFLCATIGTTAITAVDP----LKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATLD 79 (239)
Q Consensus 4 ~p~~vv~t~gtt~~G~i~p----l~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g 79 (239)
.+.+|++.-...+.|.+.| +++|.++|++||+++++|.+|.+.......+.....++ ..|.++++ |.+++...
T Consensus 225 ~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~a~~~~~~-~pdi~t~s--K~~~~G~~ 301 (453)
T 4ffc_A 225 SLAAIIIEPIQGEGGFIVPAPGFLATLTAWASENGVVFIADEVQTGFARTGAWFASEHEGI-VPDIVTMA--KGIAGGMP 301 (453)
T ss_dssp GEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTC-CCSEEEEC--GGGGTTSS
T ss_pred CEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccCCCcccccchhhhcCC-CcchHhhh--hhhcCCcC
Confidence 4567777776677788877 99999999999999999999875321111111011233 27877765 99876556
Q ss_pred ceEEEeeCcccccccccCCCCccCCCCceecCCCCCChHHHH---HHHHHhCHHHHHHHHHHHHHHHHHHHHHHh----C
Q 048438 80 CCCLWATNPEYLKNKATESKPVVDYKDWQITLSRSFRSLKLW---FVIRNYGMENLRHFLRSHVNMARLFERLVS----G 152 (239)
Q Consensus 80 ~g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~l~~~g~~g~~~~~~~~~~la~~l~~~l~----~ 152 (239)
.|.++.+ ++.+...... ....+-....+... .+++.+..+ +..++..++.+++++.|. +
T Consensus 302 ~G~~~~~-~~i~~~~~~~----------~~~~t~~~~~~~~aaa~aal~~~~~~---~~~~~~~~~~~~l~~~l~~~~~~ 367 (453)
T 4ffc_A 302 LSAVTGR-AELMDAVYAG----------GLGGTYGGNPVTCAAAVAALGVMREL---DLPARARAIEASVTSRLSALAEE 367 (453)
T ss_dssp CEEEEEE-HHHHTTSCTT----------SSCCSSSSCHHHHHHHHHHHHHHHHT---THHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEC-HHHHhhhccc----------CcCCCCCcCHHHHHHHHHHHHHhhhh---hHHHHHHHHHHHHHHHHHHHHhh
Confidence 7877664 3433332210 00000011223333 334433222 334444455556555554 3
Q ss_pred CCCeEEEcCCCeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhcCcEEEEEEEECCEeEEEEEecC
Q 048438 153 DKRFEVVFPCHFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINASGKAYMTNVVLGGIYAIRFATGA 232 (239)
Q Consensus 153 ~~g~~~~~~~~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~ 232 (239)
.+.+..+ +...+++.+.+...... ..+ ......+.+.|.++|.++... .. ...++|+++..
T Consensus 368 ~~~~~~~-~~~g~~~~~~~~~~~~~------------~~~----~~~~~~~~~~l~~~Gv~v~~~-~~-~~~~iRi~~~~ 428 (453)
T 4ffc_A 368 VDIIGEV-RGRGAMLAIEIVKPGTL------------EPD----AALTKSIAAEALSQGVLILTC-GT-FGNVIRLLPPL 428 (453)
T ss_dssp CSSEEEE-EEETTEEEEEEBCTTSC------------CBC----HHHHHHHHHHHHHTTEECCEE-CT-TSCEEEECCCT
T ss_pred CCCeEEE-EeeceEEEEEEecCccc------------CCC----HHHHHHHHHHHHhCCCEEecC-CC-CCCEEEEECCC
Confidence 4554433 22345666766431100 001 223446777787787665442 11 23688999766
Q ss_pred CCCCc
Q 048438 233 TLTEE 237 (239)
Q Consensus 233 ~~t~~ 237 (239)
..|.+
T Consensus 429 ~~t~e 433 (453)
T 4ffc_A 429 VIGDD 433 (453)
T ss_dssp TCCHH
T ss_pred CCCHH
Confidence 65554
No 193
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=99.02 E-value=8.5e-09 Score=90.93 Aligned_cols=205 Identities=9% Similarity=-0.029 Sum_probs=110.4
Q ss_pred ccEEEEEecCCCCcccccC----hhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCc-c
Q 048438 4 IPLFLCATIGTTAITAVDP----LKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFAT-L 78 (239)
Q Consensus 4 ~p~~vv~t~gtt~~G~i~p----l~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P-~ 78 (239)
.+.+|++.-..++.|.+.| +++|.++|++||+++++|.+|.+.......+.....++ ..|.++++ |.+++. .
T Consensus 223 ~~aavi~epv~~~gG~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~a~~~~~v-~pdi~t~s--K~l~gg~~ 299 (472)
T 3hmu_A 223 RVAAFIAEPVQGAGGVIVAPDSYWPEIQRICDKYDILLIADEVICGFGRTGNWFGTQTMGI-RPHIMTIA--KGLSSGYA 299 (472)
T ss_dssp GEEEEEECSSBSTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHHTC-CCSEEEEC--GGGTTTSS
T ss_pred CEEEEEEcCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccccCCcccCccchhHHhCC-CCceeeec--hhhhcCCc
Confidence 4567777777788899888 99999999999999999999975322111111012233 38888765 998765 3
Q ss_pred cceEEEeeCcccccccccCCCCccCCCCceecCCCCCChHHHHHHHHHhCHHHHHHHHHHHH-HHHHHHHHHHhCC---C
Q 048438 79 DCCCLWATNPEYLKNKATESKPVVDYKDWQITLSRSFRSLKLWFVIRNYGMENLRHFLRSHV-NMARLFERLVSGD---K 154 (239)
Q Consensus 79 g~g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~g~~~~~~~~~-~la~~l~~~l~~~---~ 154 (239)
..|+++.++ +........ .+. ...++ .+.+....+..++++.+.. ++..++.. ++.+++++.|+++ +
T Consensus 300 plG~v~~~~-~i~~~~~~~---~~~-~~~t~-~~np~a~aAa~aaL~~~~~---~~~~~~~~~~~~~~l~~~L~~l~~~~ 370 (472)
T 3hmu_A 300 PIGGSIVCD-EVAHVIGKD---EFN-HGYTY-SGHPVAAAVALENLRILEE---ENILDHVRNVAAPYLKEKWEALTDHP 370 (472)
T ss_dssp CCEEEEEEH-HHHHHHTTS---CBC-CCCTT-TTCHHHHHHHHHHHHHHHH---TTHHHHHHHTHHHHHHHHHHGGGGST
T ss_pred ceEEEEECH-HHHHhcccC---Ccc-ccCCC-CCCHHHHHHHHHHHHHHHH---hHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 567777643 332222100 000 00000 1111112222233443322 34455566 6677777777553 3
Q ss_pred CeEEEcCCCeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhcCcEEEEEEEECCEeEEEEEecCCC
Q 048438 155 RFEVVFPCHFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINASGKAYMTNVVLGGIYAIRFATGATL 234 (239)
Q Consensus 155 g~~~~~~~~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~ 234 (239)
.+..+ .+..+++.|.+...... ..+ .... .......+.+.|.++|.++... | .++|+++..-.
T Consensus 371 ~v~~v-r~~G~~~~i~~~~~~~~-------~~~-~~~~---~~~~~~~~~~~l~~~Gv~v~~~----g-~~iRi~p~~~~ 433 (472)
T 3hmu_A 371 LVGEA-KIVGMMASIALTPNKAS-------RAK-FASE---PGTIGYICRERCFANNLIMRHV----G-DRMIISPPLVI 433 (472)
T ss_dssp TEEEE-EEETTEEEEEECSCGGG-------TCC-BSSC---TTHHHHHHHHHHHHTTBCCEEE----T-TEEEECCCTTC
T ss_pred CeEEE-EecCceEEEEEecCccc-------ccc-ccch---hHHHHHHHHHHHHHCCcEEEec----C-CEEEEECCCCC
Confidence 44333 23445777777542100 000 0000 0123346777788888765542 3 78999966555
Q ss_pred CCc
Q 048438 235 TEE 237 (239)
Q Consensus 235 t~~ 237 (239)
|++
T Consensus 434 t~e 436 (472)
T 3hmu_A 434 TPA 436 (472)
T ss_dssp CHH
T ss_pred CHH
Confidence 544
No 194
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=98.57 E-value=3.3e-11 Score=103.49 Aligned_cols=199 Identities=11% Similarity=-0.025 Sum_probs=112.4
Q ss_pred cEEEEEecCCCCcccccC---hhHHHHHHHHhCCEEEEecccccccccCcccccc---cCCCCCcceEEEcCcccCCCc-
Q 048438 5 PLFLCATIGTTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHF---IDGVEGADSFSLNAHKWFFAT- 77 (239)
Q Consensus 5 p~~vv~t~gtt~~G~i~p---l~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~---~~~~~~~Ds~~~~~hK~l~~P- 77 (239)
|-+|+++..+|.+|.+.| +++|+++|++||+++++|.+|+............ ..+....+.++.+++|+++.|
T Consensus 165 ~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G 244 (392)
T 3b1d_A 165 VKLYLLCNPHNPGGRVWEREVLEQIGHLCQKHHVILVSDEIHQDLTLFGHEHVSFNTVSPDFKDFALVLSSATKTFNIAG 244 (392)
Confidence 445666777889999876 8999999999999999999998754321111010 111012567888999998633
Q ss_pred ccceEEEeeCcccccccccCCCCccCCCCceecCCCCCChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhC-CCCe
Q 048438 78 LDCCCLWATNPEYLKNKATESKPVVDYKDWQITLSRSFRSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSG-DKRF 156 (239)
Q Consensus 78 ~g~g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~-~~g~ 156 (239)
..+|+++..+++......... ..+.......+.......+++. +.+.+++..++..++.+++.+.|++ ++++
T Consensus 245 ~r~G~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 317 (392)
T 3b1d_A 245 TKNSYAIIENPTLCAQFKHQQ------LVNNHHEVSSLGYIATETAYRY-GKPWLVALKAVLEENIQFAVEYFAQEAPRL 317 (392)
Confidence 346777765443443322100 0011101111111222223332 2344566666777888889888887 6788
Q ss_pred EEEcCCCeeEEE-EEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHH-hcCcEEEEEEEE--CCEeEEEEEecC
Q 048438 157 EVVFPCHFAVVC-FRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESIN-ASGKAYMTNVVL--GGIYAIRFATGA 232 (239)
Q Consensus 157 ~~~~~~~~~iv~-f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~--~g~~~lR~~~~~ 232 (239)
++. ++..+++. +.++..+ .-...+.+.|. ++|..+...... .+..++|+++..
T Consensus 318 ~~~-~~~~~~~~~i~~~~~~----------------------~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~ 374 (392)
T 3b1d_A 318 KVM-KPQGTYLIWLDFSDYG----------------------LTDDALFTLLHDQAKVILNRGSDYGSEGELHARLNIAA 374 (392)
Confidence 765 44455443 5554311 01125566665 456555443322 246789999776
Q ss_pred C
Q 048438 233 T 233 (239)
Q Consensus 233 ~ 233 (239)
+
T Consensus 375 ~ 375 (392)
T 3b1d_A 375 P 375 (392)
Confidence 3
No 195
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=99.00 E-value=8.5e-09 Score=91.02 Aligned_cols=205 Identities=12% Similarity=-0.013 Sum_probs=110.3
Q ss_pred ccEEEEEecCCCCcccccC----hhHHHHHHHHhCCEEEEecccccccccCcccccc-cCCCCCcceEEEcCcccCCCc-
Q 048438 4 IPLFLCATIGTTAITAVDP----LKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHF-IDGVEGADSFSLNAHKWFFAT- 77 (239)
Q Consensus 4 ~p~~vv~t~gtt~~G~i~p----l~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~-~~~~~~~Ds~~~~~hK~l~~P- 77 (239)
.+.+|++....++.|.+.| +++|.++|++||+++++|.+|++.......+... ..++. .|.++++ |.+++.
T Consensus 221 ~~aavi~ep~~~~~G~~~~~~~~L~~l~~lc~~~gillI~DEv~~g~gr~G~~~~~~~~~~v~-pdi~t~s--K~l~~G~ 297 (476)
T 3i5t_A 221 TIAAFLAEPILASGGVIIPPAGYHARFKAICEKHDILYISDEVVTGFGRCGEWFASEKVFGVV-PDIITFA--KGVTSGY 297 (476)
T ss_dssp GEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHTTCCC-CSEEEEC--GGGGTTS
T ss_pred CEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccccCceeeecccCCC-cchhhhh--hhhcCCC
Confidence 4567777777788888776 9999999999999999999997532211111111 22333 7888765 998765
Q ss_pred ccceEEEeeCcccccccccCCCCccCCCCceecCCCCCChHHHH---HHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCC-
Q 048438 78 LDCCCLWATNPEYLKNKATESKPVVDYKDWQITLSRSFRSLKLW---FVIRNYGMENLRHFLRSHVNMARLFERLVSGD- 153 (239)
Q Consensus 78 ~g~g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~- 153 (239)
...|+++.+ ++........... ...+....+-....+... ++++.+.. ++..++..++.+++++.|+++
T Consensus 298 ~plg~v~~~-~~i~~~~~~~~~~---~~~~~~~~t~~~np~a~aAa~aaL~~~~~---~~~~~~~~~~~~~l~~~L~~l~ 370 (476)
T 3i5t_A 298 VPLGGLAIS-EAVLARISGENAK---GSWFTNGYTYSNQPVACAAALANIELMER---EGIVDQAREMADYFAAALASLR 370 (476)
T ss_dssp SCCEEEEEC-HHHHHTTSGGGCT---TCEECCCCTTTTCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHTTT
T ss_pred cCeEEEEEC-HHHHHHHhcCCcc---cccccccCCCCcCHHHHHHHHHHHHHHHh---HHHHHHHHHHHHHHHHHHHHHh
Confidence 456777764 3332222110000 000000001111223333 34443322 345556668888888888764
Q ss_pred --CCeEEEcCCCeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhcCcEEEEEEEECCEeEEEEEec
Q 048438 154 --KRFEVVFPCHFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINASGKAYMTNVVLGGIYAIRFATG 231 (239)
Q Consensus 154 --~g~~~~~~~~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~ 231 (239)
+.+..+ ++...++.+.+...... ..+..........+.+.|.++|.++.+ .| .++|+++.
T Consensus 371 ~~~~v~~v-~~~G~~~~i~~~~~~~~------------~~~~~~~~~~~~~~~~~l~~~Gv~v~~----~g-~~iRi~p~ 432 (476)
T 3i5t_A 371 DLPGVAET-RSVGLVGCVQCLLDPTR------------ADGTAEDKAFTLKIDERCFELGLIVRP----LG-DLCVISPP 432 (476)
T ss_dssp TSTTEEEE-EEETTEEEEEECCC-----------------CCHHHHHHHHHHHHHHHHTTEECEE----ET-TEEEECCC
T ss_pred cCCCeEEE-EecCceeEEEEecCccc------------cccccchhHHHHHHHHHHHHCCCEEEe----cC-CEEEEECC
Confidence 333332 23345666776542100 000011122445777888888766544 14 78999865
Q ss_pred CCCCC
Q 048438 232 ATLTE 236 (239)
Q Consensus 232 ~~~t~ 236 (239)
.-.|.
T Consensus 433 l~~t~ 437 (476)
T 3i5t_A 433 LIISR 437 (476)
T ss_dssp TTCCH
T ss_pred CCCCH
Confidence 54444
No 196
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=99.00 E-value=8.2e-09 Score=89.57 Aligned_cols=205 Identities=12% Similarity=0.006 Sum_probs=101.8
Q ss_pred ccEEEEEecCCC-CcccccC----hhHHHHHHHHhCCEEEEecccccccccCcccccccC-CCCCcceEEEcCcccCCCc
Q 048438 4 IPLFLCATIGTT-AITAVDP----LKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFID-GVEGADSFSLNAHKWFFAT 77 (239)
Q Consensus 4 ~p~~vv~t~gtt-~~G~i~p----l~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~-~~~~~Ds~~~~~hK~l~~P 77 (239)
.+.+|++....+ ++|.+.| +++|.++|++||+++++|.+|++.......+..... ++ ..|.++++ |.+++.
T Consensus 190 ~~~~vi~~p~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~~~~g~~~~~~~~~~~-~~di~t~s--K~l~~G 266 (430)
T 3i4j_A 190 TVAAFMAEPVVGASDAALAPAPGYYERVRDICDEAGIIFIADEVMSGMGRCGSPLALSRWSGV-TPDIAVLG--KGLAAG 266 (430)
T ss_dssp GEEEEEECSSCCGGGTTCCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTTC-CCSEEEEC--GGGTTT
T ss_pred CEEEEEEcCcccCcCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchhhhhhhcCC-CCcEEEEc--ccccCC
Confidence 456677777677 8898888 999999999999999999998743211111110112 33 26777654 998753
Q ss_pred -ccceEEEeeCcccccccccCCCCccCCCCceecCCCCCChHHHH---HHHHHhCHHHHHHHHHHHHHHHHHHHHHHh--
Q 048438 78 -LDCCCLWATNPEYLKNKATESKPVVDYKDWQITLSRSFRSLKLW---FVIRNYGMENLRHFLRSHVNMARLFERLVS-- 151 (239)
Q Consensus 78 -~g~g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~l~~~g~~g~~~~~~~~~~la~~l~~~l~-- 151 (239)
...|.++. +++.......... . +....+-....+... .+++.+..+ +..++..++.+++++.|.
T Consensus 267 ~~r~G~~~~-~~~i~~~~~~~~~-~-----~~~~~t~~~~~~~~aaa~aal~~~~~~---~~~~~~~~~~~~~~~~l~~~ 336 (430)
T 3i4j_A 267 YAPLAGLLA-APQVYETVMGGSG-A-----FMHGFTYAGHPVSVAAGLSVLDIVERE---DLTGAAKERGAQLLAGLQAL 336 (430)
T ss_dssp SSCCEEEEE-CHHHHHHHHHTTC-B-----CCCCCTTTTCHHHHHHHHHHHHHHHHT---THHHHHHHHHHHHHHHHHHH
T ss_pred ccccEEEEE-CHHHHHHHhccCC-c-----ccccCCCCCCHHHHHHHHHHHHHHHcc---cHHHHHHHHHHHHHHHHHHH
Confidence 33677776 3333322211000 0 000000011223333 334433222 333444455555555544
Q ss_pred --CCCCeEEEcCCCeeEEEEEEcCCCcchhhhhhhhcccccccHHHH-HHHHHHHHHHHHhcCcEEEEE---EEECCEeE
Q 048438 152 --GDKRFEVVFPCHFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQI-NEFNRELLESINASGKAYMTN---VVLGGIYA 225 (239)
Q Consensus 152 --~~~g~~~~~~~~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~g~~~~~~---~~~~g~~~ 225 (239)
+.+++..+ ++..+++.+.+.+... .. ... ......+.+.|.++|.++... ..-.+..+
T Consensus 337 ~~~~~~~~~~-~~~g~~~~~~~~~~~~--------------~~-~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~~~~~ 400 (430)
T 3i4j_A 337 QARFPQMMQV-RGTGLLLGVVLGDLAT--------------GQ-AFETPGIASRIGAAALKRGLITYPGSGAEPNGRGDH 400 (430)
T ss_dssp HHHCTTEEEE-EEETTEEEEEEC---------------------------CHHHHHHHHHHTTEECC-----------CE
T ss_pred HHhCCCeEEE-EEEEEEEEEEeccccc--------------cC-CCccHHHHHHHHHHHHhCCCEEEecccccCCCCCCE
Confidence 45666544 3345567777653210 00 000 011246777787787664432 11123578
Q ss_pred EEEEecCCCCCc
Q 048438 226 IRFATGATLTEE 237 (239)
Q Consensus 226 lR~~~~~~~t~~ 237 (239)
+|+++....|.+
T Consensus 401 iRi~~~~~~t~e 412 (430)
T 3i4j_A 401 LLLGPPLSITAA 412 (430)
T ss_dssp EEECCCTTCCHH
T ss_pred EEEECCCCCCHH
Confidence 999976555543
No 197
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=99.00 E-value=2.7e-10 Score=104.75 Aligned_cols=146 Identities=12% Similarity=0.056 Sum_probs=91.0
Q ss_pred cEEEEEecCCCCcccccChhHHHHHHHHhCCEEEEecccccccccCccccc--ccCCCCCcceE---EEcCcccCCCccc
Q 048438 5 PLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRH--FIDGVEGADSF---SLNAHKWFFATLD 79 (239)
Q Consensus 5 p~~vv~t~gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~--~~~~~~~~Ds~---~~~~hK~l~~P~g 79 (239)
|.+|+++.. |.+|.+.|+++|+++|+++ .++||+||+++....+..+. .+..-..+|.+ +.|+||+|++|.+
T Consensus 298 p~~vivt~p-n~~G~v~dl~~I~ela~~~--~livDEAH~~~~~f~~~~~~~~al~~g~~aD~vii~~~S~hKtL~gltq 374 (715)
T 3n75_A 298 PVHAVITNS-TYDGLLYNTDFIKKTLDVK--SIHFDSAWVPYTNFSPIYEGKCGMSGGRVEGKVIYETQSTHKLLAAFSQ 374 (715)
T ss_dssp CSEEEEESS-CTTSEEECHHHHHHHCCCS--EEEEECTTCTTGGGSGGGTTSSTTSSSCCTTCEEEEEECHHHHSSCCTT
T ss_pred ceEEEEECC-CCCCccCCHHHHHHHhCcC--cEEEccccccccccCCccccccccccCcCCCEEEEEEecccccccCCCC
Confidence 557778887 8999999999999999876 38999999987533332221 01110126776 8999999999989
Q ss_pred ceEEEeeCcccccccccCCCCccCCCCceecCCCC-CC-hHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCCCC--
Q 048438 80 CCCLWATNPEYLKNKATESKPVVDYKDWQITLSRS-FR-SLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSGDKR-- 155 (239)
Q Consensus 80 ~g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g-- 155 (239)
+|++++++......... .. ..+..+.+ +. ..++-.+++.+....-+++.++..++++++++.|+++++
T Consensus 375 gs~i~v~~~i~~~~~~~----~~----~~~~STSpsy~~~AsldaA~~~~~~~~g~~~~~~l~~~a~~~r~~L~~i~~~~ 446 (715)
T 3n75_A 375 ASMIHVKGDVNEETFNE----AY----MMHTTTSPHYGIVASTETAAAMMKGNAGKRLINGSIERAIKFRKEIKRLRTES 446 (715)
T ss_dssp CEEEEEESCCCHHHHHH----HH----HHTSCSSCCHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred eeEEEeCchhhHHHHHH----HH----HhhcCCCchHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhhc
Confidence 99999865310000000 00 00111111 11 123333455554322245778899999999999988753
Q ss_pred ----eEEEcC
Q 048438 156 ----FEVVFP 161 (239)
Q Consensus 156 ----~~~~~~ 161 (239)
++++.+
T Consensus 447 ~~~~~~~~~~ 456 (715)
T 3n75_A 447 DGWFFDVWQP 456 (715)
T ss_dssp SSCCCEESSC
T ss_pred ccceeeccCc
Confidence 566654
No 198
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=98.99 E-value=2.7e-09 Score=92.31 Aligned_cols=195 Identities=10% Similarity=0.013 Sum_probs=104.5
Q ss_pred ccEEEEEe-cCCCCcccccChh---HHHHHH-HHhCCEEEEecccccccccC-c--cccccc-----CCCCCcceEEEcC
Q 048438 4 IPLFLCAT-IGTTAITAVDPLK---PLCDVA-KQFGIWVHVDAAYAGSACIF-P--EFRHFI-----DGVEGADSFSLNA 70 (239)
Q Consensus 4 ~p~~vv~t-~gtt~~G~i~pl~---~i~~i~-~~~gi~lhvD~A~~~~~~~~-~--~~~~~~-----~~~~~~Ds~~~~~ 70 (239)
.+-+|+++ ..+|.+|.+.|.+ +|+++| ++||+++++|.+|+...+.. . ...... .+....+.++.++
T Consensus 172 ~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~ 251 (423)
T 3ez1_A 172 SVKGILFVPTYSNPGGETISLEKARRLAGLQAAAPDFTIFADDAYRVHHLVEEDRAEPVNFVVLARDAGYPDRAFVFAST 251 (423)
T ss_dssp TEEEEEECSSSCTTTCCCCCHHHHHHHHTCCCSSTTCEEEEECTTSSCBCCSSSCCCCCCHHHHHHHHTCTTSEEEEEES
T ss_pred CceEEEECCCCCCCCCcCCCHHHHHHHHHHHHhccCCEEEEECCcchhhcCCCCCCCCcchhhhhhccCCCCeEEEEeCc
Confidence 34455444 6789999998887 888888 89999999999998432211 1 000000 0112367889999
Q ss_pred cccCCCcccceEEEeeCcccccccccCCCCccCCCCceecCCCCCChHHHHH---HHHH-hC--HHHHHHHHH----HHH
Q 048438 71 HKWFFATLDCCCLWATNPEYLKNKATESKPVVDYKDWQITLSRSFRSLKLWF---VIRN-YG--MENLRHFLR----SHV 140 (239)
Q Consensus 71 hK~l~~P~g~g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~l~~-~g--~~g~~~~~~----~~~ 140 (239)
+|+++...++|+++.. ++.+..... .....+.....+..+. +++. .+ .+.+++..+ +..
T Consensus 252 sK~~~~G~r~G~~~~~-~~~~~~~~~----------~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 320 (423)
T 3ez1_A 252 SKITFAGAGLGFVASS-EDNIRWLSK----------YLGAQSIGPNKVEQARHVKFLTEYPGGLEGLMRDHAAIIAPKFR 320 (423)
T ss_dssp TTTSCSSSSCEEEEEC-HHHHHHHHH----------HHHHSCSCCCHHHHHHHHHHHHHSTTHHHHHHHHHHHHHHHHHH
T ss_pred hhhccCCcceEEEEeC-HHHHHHHHH----------HHhhhccCCCHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHH
Confidence 9986666778877763 333222110 0000001111222222 2332 11 112222222 233
Q ss_pred HHHHHHHHHHhCCC-CeEEEcCCCeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhcCcEEEE-EE
Q 048438 141 NMARLFERLVSGDK-RFEVVFPCHFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINASGKAYMT-NV 218 (239)
Q Consensus 141 ~la~~l~~~l~~~~-g~~~~~~~~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~-~~ 218 (239)
.+.+.+.+.|.+++ ++++..+...+.+.+.++... ...+.+.|.++|..+.+ ..
T Consensus 321 ~l~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~------------------------~~~~~~~l~~~gv~v~~~g~ 376 (423)
T 3ez1_A 321 AVDEVLRAELGEGGEYATWTLPKGGYFISLDTAEPV------------------------ADRVVKLAEAAGVSLTPAGA 376 (423)
T ss_dssp HHHHHHHHHHTTTTSSEEECCCSBSSCEEEEESSSC------------------------HHHHHHHHHHTTEECCCTTT
T ss_pred HHHHHHHHhcCcCCCceEEeCCCccEEEEEECCCCc------------------------HHHHHHHHHHCCcEEecCcc
Confidence 34455555565554 477765656677888886521 12455566666655443 11
Q ss_pred EE-----CCEeEEEEEecCC
Q 048438 219 VL-----GGIYAIRFATGAT 233 (239)
Q Consensus 219 ~~-----~g~~~lR~~~~~~ 233 (239)
.. .+..++|+++...
T Consensus 377 ~~~~~~~~~~~~iRis~~~~ 396 (423)
T 3ez1_A 377 TYPAGQDPHNRNLRLAPTRP 396 (423)
T ss_dssp TSSTTCCSSSCEEEECCSSS
T ss_pred cccCCCCCCCCeEEEEcCCC
Confidence 11 2457899998544
No 199
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=98.99 E-value=3.5e-09 Score=90.64 Aligned_cols=156 Identities=12% Similarity=-0.009 Sum_probs=89.5
Q ss_pred cEEEEEecCCCCcccccChhH---HHHHHHHhCCEEEEecccccccccCcccccccC------CCCCcceEEEcCcccCC
Q 048438 5 PLFLCATIGTTAITAVDPLKP---LCDVAKQFGIWVHVDAAYAGSACIFPEFRHFID------GVEGADSFSLNAHKWFF 75 (239)
Q Consensus 5 p~~vv~t~gtt~~G~i~pl~~---i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~------~~~~~Ds~~~~~hK~l~ 75 (239)
+-+|+++..+|.+|.+.|.++ |+++|++||+++++|.+|+.............. .-...+.++.+++|.++
T Consensus 169 ~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~ 248 (396)
T 3jtx_A 169 TKLVFVCSPNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQAAAQLGRSRQKLLMFTSLSKRSN 248 (396)
T ss_dssp EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEECTTTTCCSTTCCCCCHHHHHHHTTCCCTTEEEEEESTTTSS
T ss_pred cEEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCchHHhhhhhcccccCcEEEEeccccccC
Confidence 456677788899999987665 899999999999999999864332111111010 00237888999999754
Q ss_pred Cc-ccceEEEeeCcccccccccCCCCccCCCCceecCCCC-CChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCC
Q 048438 76 AT-LDCCCLWATNPEYLKNKATESKPVVDYKDWQITLSRS-FRSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSGD 153 (239)
Q Consensus 76 ~P-~g~g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~ 153 (239)
.| ..+|+++. +++.+...... . .....+.. .....+..+++. .+.+++..++..++.+++.+.|++.
T Consensus 249 ~~G~r~G~~~~-~~~~~~~~~~~-------~-~~~~~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~~~ 317 (396)
T 3jtx_A 249 VPGLRSGFVAG-DAELLKNFLLY-------R-TYHGSAMSIPVQRASIAAWDD--EQHVIDNRRLYQEKFERVIPILQQV 317 (396)
T ss_dssp CGGGCCEEEEE-CHHHHHHHHHH-------H-HHHTCCCCHHHHHHHHHHHHC--CHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred CcccceEEEEe-CHHHHHHHHHH-------H-hhcccCCCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 44 44677654 33333222100 0 00000001 111222223332 3456677777788888999999875
Q ss_pred CCeEEEcCCCeeEEEEEEcC
Q 048438 154 KRFEVVFPCHFAVVCFRVSP 173 (239)
Q Consensus 154 ~g~~~~~~~~~~iv~f~~~~ 173 (239)
+.+..+....++.+.++.
T Consensus 318 --~~~~~~~~~~~~~~~~~~ 335 (396)
T 3jtx_A 318 --FDVKLPDASFYIWLKVPD 335 (396)
T ss_dssp --SCCCCCSSSSEEEEECTT
T ss_pred --CCccCCCeeEEEEEECCC
Confidence 333333344566667654
No 200
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=98.97 E-value=2.3e-09 Score=92.93 Aligned_cols=194 Identities=12% Similarity=-0.011 Sum_probs=103.8
Q ss_pred cEEEEEe-cCCCCcccccChh---HHHHHH-HHhCCEEEEecccccccccCcccc--ccc-----CCCCCcceEEEcCcc
Q 048438 5 PLFLCAT-IGTTAITAVDPLK---PLCDVA-KQFGIWVHVDAAYAGSACIFPEFR--HFI-----DGVEGADSFSLNAHK 72 (239)
Q Consensus 5 p~~vv~t-~gtt~~G~i~pl~---~i~~i~-~~~gi~lhvD~A~~~~~~~~~~~~--~~~-----~~~~~~Ds~~~~~hK 72 (239)
+-+|+++ ..+|.||.+.|.+ +|+++| ++||+++++|.+|+...+.-.... ... .+....+.++.+++|
T Consensus 181 ~~~v~~~p~~~NPtG~~~~~~~~~~l~~~a~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK 260 (427)
T 3ppl_A 181 VKGMWVVPVFSNPTGFTVTEDVAKRLSAMETAAPDFRVVWDNAYAVHTLTDEFPEVIDIVGLGEAAGNPNRFWAFTSTSK 260 (427)
T ss_dssp EEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTSEEEEEESTT
T ss_pred CeEEEECCCCCCCCCccCCHHHHHHHHHHHhhcCCCEEEEECCCcccccCCCCCCccchhhhhhccCCCCcEEEEechhh
Confidence 4455544 7789999998887 888888 999999999999986433211100 001 012246788999999
Q ss_pred cCCCcccceEEEeeCcccccccccCCCCccCCCCceecCCCCCChHHHHHHHHHhCH-----HHHHHHHHHHHHH----H
Q 048438 73 WFFATLDCCCLWATNPEYLKNKATESKPVVDYKDWQITLSRSFRSLKLWFVIRNYGM-----ENLRHFLRSHVNM----A 143 (239)
Q Consensus 73 ~l~~P~g~g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~-----~g~~~~~~~~~~l----a 143 (239)
+++...++|+++.. ++.+..... .....+.....+....+...+.. +.+++..+...+. .
T Consensus 261 ~~~~G~r~G~~~~~-~~l~~~~~~----------~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~ 329 (427)
T 3ppl_A 261 ITLAGAGVSFFLTS-AENRKWYTG----------HAGIRGIGPNKVNQLAHARYFGDAEGVRAVMRKHAASLAPKFNKVL 329 (427)
T ss_dssp TSCTTSSCEEEECC-HHHHHHHHH----------HHHHHCSCCCHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCcCccEEEEEcC-HHHHHHHHH----------HhhcccCCCCHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHH
Confidence 96655667776653 333222110 00000011122222222222221 1222333333333 3
Q ss_pred HHHHHHHhCCCCeEEEcCCCeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhcCcEEEE-EEEE--
Q 048438 144 RLFERLVSGDKRFEVVFPCHFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINASGKAYMT-NVVL-- 220 (239)
Q Consensus 144 ~~l~~~l~~~~g~~~~~~~~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~-~~~~-- 220 (239)
+.+.+.+..++++++..+...+.+.+.+++.. ...+.+.|.++|..+.+ ....
T Consensus 330 ~~L~~~l~~~~~~~~~~p~~g~~~~~~~~~~~------------------------~~~~~~~l~~~gv~v~~~g~~~~~ 385 (427)
T 3ppl_A 330 EILDSRLAEYGVAQWTVPAGGYFISLDVVPGT------------------------ASRVAELAKEAGIALTGAGSSYPL 385 (427)
T ss_dssp HHHHHHHGGGTCCEECCCSBSSCEEEECSTTC------------------------HHHHHHHHHHTTEECCCTTTTSGG
T ss_pred HHHHHhcCCCCceEEeCCCccEEEEEECCcch------------------------HHHHHHHHHHCCCEEecCcCcCCC
Confidence 44444444444677665656667777776421 12455666666655443 1111
Q ss_pred ---CCEeEEEEEecCC
Q 048438 221 ---GGIYAIRFATGAT 233 (239)
Q Consensus 221 ---~g~~~lR~~~~~~ 233 (239)
.+..++|+++...
T Consensus 386 ~~~~~~~~~Ris~~~~ 401 (427)
T 3ppl_A 386 RQDPENKNLRLAPSLP 401 (427)
T ss_dssp GCCTTSCEEEECCSSS
T ss_pred CCCCCCCeEEEECCCC
Confidence 2467899998554
No 201
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=98.96 E-value=2.9e-09 Score=93.47 Aligned_cols=212 Identities=11% Similarity=0.025 Sum_probs=105.7
Q ss_pred ccEEEEEecCCCCcccccC----hhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCc-c
Q 048438 4 IPLFLCATIGTTAITAVDP----LKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFAT-L 78 (239)
Q Consensus 4 ~p~~vv~t~gtt~~G~i~p----l~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P-~ 78 (239)
.+.+|++.-..++.|.+.| +++|.++|++||+++++|.+|++.......+.....++ ..|.++++ |.+++. .
T Consensus 221 ~~aaii~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~~~~~~~~-~pdi~t~s--K~l~gG~~ 297 (460)
T 3gju_A 221 TIAAFIGEPILGTGGIVPPPAGYWEKIQAVLKKYDVLLVADEVVTGFGRLGTMFGSDHYGI-KPDLITIA--KGLTSAYA 297 (460)
T ss_dssp GEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHHTC-CCSEEEEC--GGGTTTSS
T ss_pred CEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccchHhhcCC-CCCeeeee--hhhcCCCC
Confidence 4567777777788888777 99999999999999999999884321111110012233 27887765 998764 3
Q ss_pred cceEEEeeCcccccccccC--CCCccCCCCceecCCCCCChHHHHHHHHHhCHHHH-HHHHHHHHHHHHHHHHHHhCCCC
Q 048438 79 DCCCLWATNPEYLKNKATE--SKPVVDYKDWQITLSRSFRSLKLWFVIRNYGMENL-RHFLRSHVNMARLFERLVSGDKR 155 (239)
Q Consensus 79 g~g~l~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~g~-~~~~~~~~~la~~l~~~l~~~~g 155 (239)
..|.++.++ +........ ....+. ...+. .+......+...+++.+..+.+ ++..+....+.+.+.+.+.+.+.
T Consensus 298 ~lg~v~~~~-~i~~~~~~~~~~~~~~~-~~~t~-~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 374 (460)
T 3gju_A 298 PLSGVIVAD-RVWQVLVQGSDKLGSLG-HGWTY-SAHPICVAAGVANLELIDEMDLVTNAGETGAYFRAELAKAVGGHKN 374 (460)
T ss_dssp CCEEEEEEH-HHHHHHHHHHHHHCSCS-CCCTT-TTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTTSTT
T ss_pred CeEEEEECH-HHHHHHhcccccccccc-cCCCC-CCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 567777643 322221100 000000 00000 1111112222334443322322 22222223334444445555555
Q ss_pred eEEEcCCCeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhcCcEEEEEEEECCEeEEEEEecCCCC
Q 048438 156 FEVVFPCHFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINASGKAYMTNVVLGGIYAIRFATGATLT 235 (239)
Q Consensus 156 ~~~~~~~~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t 235 (239)
+..+ .+..+++.+.+...... . .....+ ......+.+.|.++|.++.... +..++|+++....|
T Consensus 375 ~~~~-~~~g~~~~~~~~~~~~~-------~-~~~~~~----~~~~~~~~~~l~~~Gv~v~~~~---~~~~iRi~~~~~~t 438 (460)
T 3gju_A 375 VGEV-RGDGMLAAVEFVADKDD-------R-VFFDAS----QKIGPQVATALAASGVIGRAMP---QGDILGFAPPLCLT 438 (460)
T ss_dssp EEEE-EEETTEEEEEECSBTTT-------T-BCCCGG----GCHHHHHHHHHHHTTEECEECS---SSCEEEECCCTTCC
T ss_pred eEEE-eeeeEEEEEEEccCccc-------c-ccccch----HHHHHHHHHHHHHCCeEEecCC---CCCEEEEECCCCCC
Confidence 5443 23345677776542100 0 000000 1223467777877876544321 34789999665555
Q ss_pred Cc
Q 048438 236 EE 237 (239)
Q Consensus 236 ~~ 237 (239)
++
T Consensus 439 ~e 440 (460)
T 3gju_A 439 RE 440 (460)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 202
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=98.95 E-value=7.4e-09 Score=90.82 Aligned_cols=205 Identities=10% Similarity=0.009 Sum_probs=105.6
Q ss_pred ccEEEEEecCCCCcccccC----hhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCc-c
Q 048438 4 IPLFLCATIGTTAITAVDP----LKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFAT-L 78 (239)
Q Consensus 4 ~p~~vv~t~gtt~~G~i~p----l~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P-~ 78 (239)
.+.+|++.-..++.|.+.| +++|.++|++||+++++|.+|.+.......+.....++ ..|.++++ |.+++. .
T Consensus 219 ~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~G~~~~~~~~~~-~pdi~t~s--K~l~gg~~ 295 (459)
T 4a6r_A 219 KVAAFVGEPIQGAGGVIVPPATYWPEIERICRKYDVLLVADEVICGFGRTGEWFGHQHFGF-QPDLFTAA--KGLSSGYL 295 (459)
T ss_dssp GEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTC-CCSEEEEC--GGGGTTSS
T ss_pred CEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccchHhhcCC-CCCeeehh--hhhcCCCC
Confidence 4567777777788888888 99999999999999999999875321111111012233 37888765 988764 4
Q ss_pred cceEEEeeCcccccccccCCCCccCCCCceecCCCCCChHHHHHHHHHhCHHHHHHHHHHHH-HHHHHHHH----HHhCC
Q 048438 79 DCCCLWATNPEYLKNKATESKPVVDYKDWQITLSRSFRSLKLWFVIRNYGMENLRHFLRSHV-NMARLFER----LVSGD 153 (239)
Q Consensus 79 g~g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~g~~~~~~~~~-~la~~l~~----~l~~~ 153 (239)
..|+++.+ ++........... . ...++ .+.+........+++.+..+ +..++.. ++.+++++ .|.+.
T Consensus 296 ~lg~v~~~-~~i~~~~~~~~~~-~--~~~t~-~~~~~~~aaa~aal~~~~~~---~~~~~~~~~~~~~~~~~l~~~l~~~ 367 (459)
T 4a6r_A 296 PIGAVFVG-KRVAEGLIAGGDF-N--HGFTY-SGHPVCAAVAHANVAALRDE---GIVQRVKDDIGPYMQKRWRETFSRF 367 (459)
T ss_dssp CCEEEEEC-HHHHHHHHHHCTT-H--HHHHH-CSCHHHHHHHHHHHHHHHHT---CHHHHHHHTHHHHHHHHHHHHHTTC
T ss_pred CccceeeC-HHHHHHhhcCCCc-c--cCCCC-CCCHHHHHHHHHHHHHHhcc---hHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 57777764 3332221100000 0 00010 11111122222334433222 2333333 44444444 44555
Q ss_pred CCeEEEcCCCeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhcCcEEEEEEEECCEeEEEEEecCC
Q 048438 154 KRFEVVFPCHFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINASGKAYMTNVVLGGIYAIRFATGAT 233 (239)
Q Consensus 154 ~g~~~~~~~~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~ 233 (239)
+.+..+ ++..+++.|.+...... . .....+ ......+.+.|.++|.++... | .++|+++...
T Consensus 368 ~~~~~~-~~~g~~~~~~~~~~~~~-------~-~~~~~~----~~~~~~~~~~l~~~Gv~v~~~----g-~~iRi~~~~~ 429 (459)
T 4a6r_A 368 EHVDDV-RGVGMVQAFTLVKNKAK-------R-ELFPDF----GEIGTLCRDIFFRNNLIMRAC----G-DHIVSAPPLV 429 (459)
T ss_dssp TTEEEE-EEETTEEEEEECSBTTT-------T-BCCSST----THHHHHHHHHHHHTTEECEEE----T-TEEEECCCTT
T ss_pred CCeEEE-EEEEEEEEEEEecCccc-------c-ccccch----HHHHHHHHHHHHHCCeEEecC----C-CEEEEECCCC
Confidence 555444 33455677777542100 0 000001 123346777788887665542 3 7899996655
Q ss_pred CCCc
Q 048438 234 LTEE 237 (239)
Q Consensus 234 ~t~~ 237 (239)
.|.+
T Consensus 430 ~t~e 433 (459)
T 4a6r_A 430 MTRA 433 (459)
T ss_dssp CCHH
T ss_pred CCHH
Confidence 5544
No 203
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=98.92 E-value=2.3e-08 Score=87.44 Aligned_cols=206 Identities=12% Similarity=-0.004 Sum_probs=103.4
Q ss_pred ccEEEEEecCC-CCcccccC----hhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCcc
Q 048438 4 IPLFLCATIGT-TAITAVDP----LKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATL 78 (239)
Q Consensus 4 ~p~~vv~t~gt-t~~G~i~p----l~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~ 78 (239)
.+.+|++.-.. ++.|.+.| +++|.++|++||+++++|.+|++.......+.....++. .|.++++ |.+++.+
T Consensus 210 ~~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~a~~~~~~~-~di~t~s--K~l~~G~ 286 (448)
T 3dod_A 210 EIAALSIESMVQGASGMIVMPEGYLAGVRELCTTYDVLMIVDEVATGFGRTGKMFACEHENVQ-PDLMAAG--KGITGGY 286 (448)
T ss_dssp GEEEEEEESSEESTTTCEECCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCC-CSEEEEC--GGGGTTS
T ss_pred CEEEEEEeCcccCCCCeecCCHHHHHHHHHHHHHhCCEEEEeccccCCCcccchhhhhhcCCC-CCEEEec--ccccCCc
Confidence 34566666666 77888777 999999999999999999998743211111111122332 7877765 9987652
Q ss_pred -cceEEEeeCcccccccccCCCCccCCCCceecCCCCCChHHHH---HHHHHhCHHHHHHHHHHHHHHHHHHHHHHhC--
Q 048438 79 -DCCCLWATNPEYLKNKATESKPVVDYKDWQITLSRSFRSLKLW---FVIRNYGMENLRHFLRSHVNMARLFERLVSG-- 152 (239)
Q Consensus 79 -g~g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~-- 152 (239)
..|+++.++ +.......... . ...+....+-....+... .+++.+..+ +..++..++.+++++.|.+
T Consensus 287 ~~ig~v~~~~-~~~~~~~~~~~--~-~~~~~~~~t~~~~~~~~aaa~aal~~~~~~---~~~~~~~~~~~~~~~~l~~l~ 359 (448)
T 3dod_A 287 LPIAVTFATE-DIYKAFYDDYE--N-LKTFFHGHSYTGNQLGCAVALENLALFESE---NIVEQVAEKSKKLHFLLQDLH 359 (448)
T ss_dssp SCCEEEEEEH-HHHHTTCSCGG--G-CCCCCCCCTTTTCHHHHHHHHHHHHHHHHT---THHHHHHHHHHHHHHHHHHHT
T ss_pred CceEEEEECH-HHHHHhhhccc--c-CCcccccCCCCcCHHHHHHHHHHHHHHhcc---cHHHHHHHHHHHHHHHHHHHh
Confidence 567777643 33222211000 0 000000011111223333 334433222 3344445666666666544
Q ss_pred -CCCeEEEcCCCeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhcCcEEEEEEEECCEeEEEEEec
Q 048438 153 -DKRFEVVFPCHFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINASGKAYMTNVVLGGIYAIRFATG 231 (239)
Q Consensus 153 -~~g~~~~~~~~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~ 231 (239)
.+.+..+ +....++.+.+...... . ...+.. ......+.+.|.++|.++.+. | .++|+++.
T Consensus 360 ~~~~~~~~-~~~g~~~~~~~~~~~~~-------~---~~~~~~--~~~~~~~~~~l~~~Gv~~~~~----~-~~iRi~~~ 421 (448)
T 3dod_A 360 ALPHVGDI-RQLGFMCGAELVRSKET-------K---EPYPAD--RRIGYKVSLKMRELGMLTRPL----G-DVIAFLPP 421 (448)
T ss_dssp TSTTEEEE-EEETTEEEEEECSBTTT-------T---BCCCGG--GCHHHHHHHHHHHTTEECCEE----T-TEEEECCC
T ss_pred cCCCeEEE-EeeeEEEEEEEccCccc-------c---cccchh--hHHHHHHHHHHHHCCcEEecc----C-CEEEEECC
Confidence 3333322 22344666776542100 0 000000 001235667777787655432 3 68999876
Q ss_pred CCCCCc
Q 048438 232 ATLTEE 237 (239)
Q Consensus 232 ~~~t~~ 237 (239)
...|++
T Consensus 422 ~~~t~e 427 (448)
T 3dod_A 422 LASTAE 427 (448)
T ss_dssp TTCCHH
T ss_pred CCCCHH
Confidence 655544
No 204
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=98.91 E-value=1.2e-08 Score=89.61 Aligned_cols=193 Identities=10% Similarity=-0.076 Sum_probs=106.2
Q ss_pred ccEEEEEec-CCCCcccccC----hhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCc-
Q 048438 4 IPLFLCATI-GTTAITAVDP----LKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFAT- 77 (239)
Q Consensus 4 ~p~~vv~t~-gtt~~G~i~p----l~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P- 77 (239)
.+.+|++.. ..+.+|.+.| +++|.++|++||+++++|.+|.+..-....+.....++ ..|.+++ .|.+++.
T Consensus 233 ~~aavi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~gr~G~~~a~~~~~~-~pdiit~--sK~l~gG~ 309 (457)
T 3tfu_A 233 ELAAVVVEPVVQGAGGMRFHDPRYLHDLRDICRRYEVLLIFDEIATGFGRTGALFAADHAGV-SPDIMCV--GKALTGGY 309 (457)
T ss_dssp GEEEEEECSSEECTTTCEECCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTC-CCSEEEE--CGGGGTTS
T ss_pred CEEEEEEeCCCcCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcCccCCccccchhHhHhcCC-CceEEEE--ChhhhCCC
Confidence 356676766 6788898887 99999999999999999999875321111010012233 3788755 5988775
Q ss_pred ccceEEEeeCcccccccccCCCCccCCCCceecCCCCCChHHHH---HHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCC-
Q 048438 78 LDCCCLWATNPEYLKNKATESKPVVDYKDWQITLSRSFRSLKLW---FVIRNYGMENLRHFLRSHVNMARLFERLVSGD- 153 (239)
Q Consensus 78 ~g~g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~- 153 (239)
...|+++.++ +............ +....+-....+... ++++.+..+ +..++..++.+++++.|+++
T Consensus 310 ~~lG~v~~~~-~i~~~~~~~~~~~-----~~~~~t~~~n~~a~aaa~aaL~~~~~~---~~~~~~~~~~~~l~~~L~~l~ 380 (457)
T 3tfu_A 310 LSLAATLCTA-DVAHTISAGAAGA-----LMHGPTFMANPLACAVSVASVELLLGQ---DWRTRITELAAGLTAGLDTAR 380 (457)
T ss_dssp SCCEEEEEEH-HHHHHHHHSSSCS-----CCCCCTTTTCHHHHHHHHHHHHHHHTS---CHHHHHHHHHHHHHHHHGGGG
T ss_pred cceEEEEEcH-HHHHHhhccCCCc-----eeEecCCCcCHHHHHHHHHHHHHHhhh---HHHHHHHHHHHHHHHHHHHHh
Confidence 2577777653 3222111000000 000000011223333 334433222 34555667888888888764
Q ss_pred --CCeEEEcCCCeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhcCcEEEEEEEECCEeEEEEEec
Q 048438 154 --KRFEVVFPCHFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINASGKAYMTNVVLGGIYAIRFATG 231 (239)
Q Consensus 154 --~g~~~~~~~~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~ 231 (239)
+++..+ +...+++.|.++... + ...+.+.|.++|.+... ...++|+++.
T Consensus 381 ~~~~v~~v-r~~G~~~~i~l~~~~----------------~-------~~~~~~~l~~~Gv~v~~-----~~~~lRi~p~ 431 (457)
T 3tfu_A 381 ALPAVTDV-RVCGAIGVIECDRPV----------------D-------LAVATPAALDRGVWLRP-----FRNLVYAMPP 431 (457)
T ss_dssp GSTTEEEE-EECSSCEEEEESSCC----------------C-------HHHHHHHHHHTTEECCC-----BTTEEEECCC
T ss_pred cCCCeeee-ecCCeEEEEEECCcc----------------c-------HHHHHHHHHHCCeEEEe-----cCCEEEEECC
Confidence 444433 234567777775421 0 12566777777755432 2258898865
Q ss_pred CCCCCc
Q 048438 232 ATLTEE 237 (239)
Q Consensus 232 ~~~t~~ 237 (239)
...|.+
T Consensus 432 ~~~t~e 437 (457)
T 3tfu_A 432 YICTPA 437 (457)
T ss_dssp TTCCHH
T ss_pred CCCCHH
Confidence 554543
No 205
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=98.87 E-value=5.1e-08 Score=84.85 Aligned_cols=145 Identities=12% Similarity=0.082 Sum_probs=78.2
Q ss_pred cEEEEEecCCCCcccccChhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCcccceEEE
Q 048438 5 PLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLW 84 (239)
Q Consensus 5 p~~vv~t~gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~ 84 (239)
+-+|++++ .+|...|+++|.++|+++|+++|+|+||+.+... + .+. . + ..+|+++++++|....|.|.|.++
T Consensus 159 ~~~v~~~~---~~g~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~-~-~~~-~-~-~~~d~~~~s~~~~k~l~~g~gg~~ 230 (437)
T 3bb8_A 159 TKAIMIAH---TLGNLFDLAEVRRVADKYNLWLIEDCCDALGSTY-D-GKM-A-G-TFGDIGTVSFYPAKHITMGEGGAV 230 (437)
T ss_dssp EEEEEEEC---GGGCCCCHHHHHHHHHHHTCEEEEECTTCTTCEE-T-TEE-T-T-SSSSEEEEECSTTSSSCCSSCEEE
T ss_pred CeEEEEeC---CCCChhcHHHHHHHHHHcCCEEEEECccccCceE-C-Cee-c-c-cccCEEEEECcCCcCCCCCCeEEE
Confidence 44555554 5788899999999999999999999999977554 2 111 1 1 126887666432222233444444
Q ss_pred eeCccccccc---ccCCCCc--------------cC---------C-CCcee-cCCC--CCChHHHHHHHHHhCHHHHHH
Q 048438 85 ATNPEYLKNK---ATESKPV--------------VD---------Y-KDWQI-TLSR--SFRSLKLWFVIRNYGMENLRH 134 (239)
Q Consensus 85 ~~~~~~l~~~---~~~~~~~--------------~~---------~-~~~~~-~~~~--~~~~~~~~~~l~~~g~~g~~~ 134 (239)
+.++..+... ....... +. + ..++. ..+. +...+....++..+ +.+.+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l--~~~~~ 308 (437)
T 3bb8_A 231 FTQSAELKSIIESFRDWGRDCYCAPGCDNTCKKRFGQQLGSLPFGYDHKYTYSHLGYNLKITDMQAACGLAQL--ERIEE 308 (437)
T ss_dssp EESCHHHHHHHHHHHBTTBCC----------------CCSCCCTTCCGGGCBCSCCCBCCCBHHHHHHHHHHH--HHHHH
T ss_pred EeCCHHHHHHHHHHHHhCcccccccccccccccccccccccccccccccccccccCcccCCCHHHHHHHHHHH--HHHHH
Confidence 4443222111 0000000 00 0 00000 0111 11233333333332 34456
Q ss_pred HHHHHHHHHHHHHHHHhCCCCeEEE
Q 048438 135 FLRSHVNMARLFERLVSGDKRFEVV 159 (239)
Q Consensus 135 ~~~~~~~la~~l~~~l~~~~g~~~~ 159 (239)
.+++..++++++.+.|++++++.++
T Consensus 309 ~~~~~~~~~~~l~~~L~~~~g~~~~ 333 (437)
T 3bb8_A 309 FVEKRKANFKYLKDALQSCADFIEL 333 (437)
T ss_dssp HHHHHHHHHHHHHHHGGGGTTTEEC
T ss_pred HHHHHHHHHHHHHHHhhccCCcccc
Confidence 6777789999999999998887665
No 206
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=98.86 E-value=3.3e-08 Score=85.81 Aligned_cols=154 Identities=10% Similarity=-0.029 Sum_probs=86.0
Q ss_pred ccEEEEEecCCCCcccccC----hhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCccc
Q 048438 4 IPLFLCATIGTTAITAVDP----LKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATLD 79 (239)
Q Consensus 4 ~p~~vv~t~gtt~~G~i~p----l~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g 79 (239)
.+.+|++....+++|.+.| +++|.++|++||+++|+|.+|.+. ...........++. .|.+++ .|.++++..
T Consensus 202 ~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~illI~DEv~~g~-~~g~~~~~~~~~~~-~di~t~--sK~~~~G~~ 277 (434)
T 3l44_A 202 EVAAILVEPIVGNFGIVEPKPGFLEKVNELVHEAGALVIYDEVITAF-RFMYGGAQDLLGVT-PDLTAL--GKVIGGGLP 277 (434)
T ss_dssp GEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHTTTCEEEEECTTTTT-TSSSSCHHHHHTCC-CSEEEE--EGGGGTTSS
T ss_pred CEEEEEEcCCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccce-eccccHHHHHcCCC-CCeeeh--hhhhcCCcC
Confidence 3467777777778899998 999999999999999999999754 21111100112332 777665 599887777
Q ss_pred ceEEEeeCcccccccccCCCCccCCCCceecCCCCCChHHH---HHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhC----
Q 048438 80 CCCLWATNPEYLKNKATESKPVVDYKDWQITLSRSFRSLKL---WFVIRNYGMENLRHFLRSHVNMARLFERLVSG---- 152 (239)
Q Consensus 80 ~g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~---- 152 (239)
.|.++. +++.+....... ......+-....+.. ..+++.+.. ++..++..++.+++++.|++
T Consensus 278 iG~~~~-~~~i~~~~~~~~-------~~~~~~t~~~~~~a~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~ 346 (434)
T 3l44_A 278 IGAYGG-KKEIMEQVAPLG-------PAYQAGTMAGNPASMASGIACLEVLQQ---EGLYEKLDELGATLEKGILEQAAK 346 (434)
T ss_dssp CEEEEE-CHHHHTTBTTTS-------SBCCCCTTTTCHHHHHHHHHHHHHHTS---TTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eeeEEE-cHHHHHhhccCC-------CcccCCCCCcCHHHHHHHHHHHHHHHc---ccHHHHHHHHHHHHHHHHHHHHHh
Confidence 888865 444433322100 000000111122332 233443322 23445555666777776654
Q ss_pred CCCeEEEcCCCeeEEEEEEcC
Q 048438 153 DKRFEVVFPCHFAVVCFRVSP 173 (239)
Q Consensus 153 ~~g~~~~~~~~~~iv~f~~~~ 173 (239)
.+.+..+ +...+++.+.+..
T Consensus 347 ~~~~~~~-~~~g~~~~~~~~~ 366 (434)
T 3l44_A 347 HNIDITL-NRLKGALTVYFTT 366 (434)
T ss_dssp TTCCEEE-EEETTEEEEEESS
T ss_pred CCCCEEE-EeeccEEEEEEec
Confidence 2222221 3345677777754
No 207
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=98.85 E-value=1.4e-08 Score=88.11 Aligned_cols=84 Identities=15% Similarity=-0.011 Sum_probs=58.2
Q ss_pred ccEEEEEecCCCCcccccC----hhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCccc
Q 048438 4 IPLFLCATIGTTAITAVDP----LKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATLD 79 (239)
Q Consensus 4 ~p~~vv~t~gtt~~G~i~p----l~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g 79 (239)
.+.+|++....+++|.+.| +++|.++|++||+++++|.+|++. ...........++ ..|.++++ |.+++...
T Consensus 199 ~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~~~~~~~~~~-~~di~t~s--K~~~~G~~ 274 (427)
T 3fq8_A 199 EIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVITGF-RIAYGGVQEKFGV-TPDLTTLG--KIIGGGLP 274 (427)
T ss_dssp TEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHTTCEEEEECTTTBT-TTBTTHHHHHTTC-CCSEEEEC--GGGGTTSS
T ss_pred CEEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCcchhhHhcCC-CCChhhhh--hhhhCCcc
Confidence 5677888888888999999 999999999999999999999843 2111011012233 27877665 99875444
Q ss_pred ceEEEeeCccccc
Q 048438 80 CCCLWATNPEYLK 92 (239)
Q Consensus 80 ~g~l~~~~~~~l~ 92 (239)
.|+++. +++.+.
T Consensus 275 ~G~~~~-~~~~~~ 286 (427)
T 3fq8_A 275 VGAYGG-KREIMQ 286 (427)
T ss_dssp CEEEEE-CHHHHT
T ss_pred eEEEEE-cHHHHH
Confidence 787766 444443
No 208
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=98.83 E-value=1.7e-08 Score=87.03 Aligned_cols=189 Identities=12% Similarity=0.027 Sum_probs=101.5
Q ss_pred EEEEEecC-CCCcccccChhHHHHH---HH------HhCCEEEEecccccccccCcccccc---cCCCCCcc---eEEEc
Q 048438 6 LFLCATIG-TTAITAVDPLKPLCDV---AK------QFGIWVHVDAAYAGSACIFPEFRHF---IDGVEGAD---SFSLN 69 (239)
Q Consensus 6 ~~vv~t~g-tt~~G~i~pl~~i~~i---~~------~~gi~lhvD~A~~~~~~~~~~~~~~---~~~~~~~D---s~~~~ 69 (239)
.+++++.. +|.+|.+.|.+++.++ |+ +||+++++|.+|+............ ..++. -| +++.+
T Consensus 180 ~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~S 258 (413)
T 3t18_A 180 IASLINSPGNNPTGYSLSDEEWDEVITFLKEKAEDKDKKITLIVDVAYLEFAGDGDQQRKFFEKFSNLP-RNLFVVVAFS 258 (413)
T ss_dssp EEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTTSTTCEEEEEEECTTGGGSSSSSTTTGGGGGGTTCC-TTEEEEEEEE
T ss_pred EEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHhhccCCcEEEEEecccccccCChhhHHHHHHHHhhcC-CCeeEEEEEe
Confidence 36666665 8999999887666555 55 8999999999986543321111111 11221 23 66779
Q ss_pred CcccCCCc-ccceEEEee--CcccccccccCCCCccCCCCce-ecCCCCCChHHHHHHHHHhCHH-------HHHHHHHH
Q 048438 70 AHKWFFAT-LDCCCLWAT--NPEYLKNKATESKPVVDYKDWQ-ITLSRSFRSLKLWFVIRNYGME-------NLRHFLRS 138 (239)
Q Consensus 70 ~hK~l~~P-~g~g~l~~~--~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~g~~-------g~~~~~~~ 138 (239)
++|.++.| ..+|+++.. +++.+...... .... .........+...++...+... ..++..++
T Consensus 259 ~sK~~~~~G~riG~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~ 331 (413)
T 3t18_A 259 MSKSHTAYGLRSGAAVGISSSKEIIEEFEAS-------LAHSARCNWSNGTHAAQNILIELERAENKKIYEQELVDLRNM 331 (413)
T ss_dssp HHHHTTCGGGCCEEEEEEESCHHHHHHHHHH-------HHHHHHHHTSSCCHHHHHHHHHTTSHHHHHHHHHHHHHHHHH
T ss_pred cCccCCCcCcCcEEEEEecCCHHHHHHHHHH-------HHHhhhccccCCChHHHHHHHHHhcChHHHHHHHHHHHHHHH
Confidence 99998744 236777652 33333222100 0000 0000011223333333333222 23344566
Q ss_pred HHHHHHHHHHHHhCCCCeEEEcCCCeeEEE-EEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhcCcEEEEE
Q 048438 139 HVNMARLFERLVSGDKRFEVVFPCHFAVVC-FRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINASGKAYMTN 217 (239)
Q Consensus 139 ~~~la~~l~~~l~~~~g~~~~~~~~~~iv~-f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~ 217 (239)
..++.+++.+.|++. |+++. +++.++.. +.+.. ...+.+.|.++|....+
T Consensus 332 ~~~~~~~l~~~l~~~-g~~~~-~~~~~~~~~~~~~~--------------------------~~~~~~~l~~~gv~v~~- 382 (413)
T 3t18_A 332 LKSRADVFVTAAKEN-KLTMI-PYFGGFFTFIPTDK--------------------------AFDIVKDLEKENIFTIP- 382 (413)
T ss_dssp HHHHHHHHHHHHHHT-TCCCB-CCCSSSCEEEECSC--------------------------HHHHHHHHHHTTEECEE-
T ss_pred HHHHHHHHHHHHHHc-CCCcc-CCCceEEEEeCCCC--------------------------HHHHHHHHHhCCEEEec-
Confidence 677888889999887 88765 34444332 22211 11455566666655443
Q ss_pred EEECCEeEEEEEecCCCC
Q 048438 218 VVLGGIYAIRFATGATLT 235 (239)
Q Consensus 218 ~~~~g~~~lR~~~~~~~t 235 (239)
|..++|+++....+
T Consensus 383 ----g~~~iRis~~~~~~ 396 (413)
T 3t18_A 383 ----SAKGIRVAICGVGE 396 (413)
T ss_dssp ----CSSEEEECTTTSCG
T ss_pred ----CCCceEEEEeeCCH
Confidence 45689999775443
No 209
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=98.82 E-value=6.5e-08 Score=84.01 Aligned_cols=154 Identities=9% Similarity=0.007 Sum_probs=87.2
Q ss_pred ccEEEEEecCCCCcccccC----hhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCccc
Q 048438 4 IPLFLCATIGTTAITAVDP----LKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATLD 79 (239)
Q Consensus 4 ~p~~vv~t~gtt~~G~i~p----l~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g 79 (239)
.+.+|+++...+++|.+.| +++|.++|++||+++++|.+|++. .....+.....++ ..|.+++ +|++++...
T Consensus 203 ~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~-~~g~~~~~~~~~~-~~di~s~--sK~l~~G~~ 278 (434)
T 2epj_A 203 RIAGVIVEPVIANAGVIPPRREFLAALQRLSRESGALLILDEVVTGF-RLGLEGAQGYFNI-EGDIIVL--GKIIGGGFP 278 (434)
T ss_dssp GEEEEEECSSBCSSSCBCCCHHHHHHHHHHHHHHTCEEEEEETTTTT-TSSTTHHHHHHTC-CCSEEEE--EGGGGTTSS
T ss_pred CEEEEEEeCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEcchhce-eCCcchhhHHhCC-CCCeeee--cchhcCCcc
Confidence 4567777777677999988 999999999999999999999843 2111110001233 2787654 699887445
Q ss_pred ceEEEeeCcccccccccCCCCccCCCCceecCCC-CCChHHH---HHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCCC-
Q 048438 80 CCCLWATNPEYLKNKATESKPVVDYKDWQITLSR-SFRSLKL---WFVIRNYGMENLRHFLRSHVNMARLFERLVSGDK- 154 (239)
Q Consensus 80 ~g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~- 154 (239)
.|+++.+ ++.+....... . . ...++ ....+.. ..+++.+.. ++..++..++.+++.+.|+++.
T Consensus 279 ~G~v~~~-~~~~~~l~~~~-~------~-~~~~t~~~~~~~~aa~~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~~~~ 346 (434)
T 2epj_A 279 VGAVAGS-REVMSLLTPQG-K------V-FNAGTFNAHPITMAAGLATLKALEE---EPVYSVSREAAKALEEAASEVLD 346 (434)
T ss_dssp CEEEEEC-HHHHTTBTTTS-S------B-CCCCTTTTCHHHHHHHHHHHHHHHH---SCHHHHHHHHHHHHHHHHHHHHH
T ss_pred eeeeeec-HHHHHhhccCC-C------c-ccCCCCCcCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHh
Confidence 7777774 34433322100 0 0 00111 1122222 233443322 3455666678888888886531
Q ss_pred --CeEEEcCCCeeEEEEEEcC
Q 048438 155 --RFEVVFPCHFAVVCFRVSP 173 (239)
Q Consensus 155 --g~~~~~~~~~~iv~f~~~~ 173 (239)
++....++..+++.+.++.
T Consensus 347 ~~~~~~~~~~~g~~~~i~~~~ 367 (434)
T 2epj_A 347 RTGLPYTINRVESMMQLFIGV 367 (434)
T ss_dssp HHTCCEEEEEETTEEEEEETC
T ss_pred hCCCcEEEEEeeeEEEEEEeC
Confidence 3321113345677888764
No 210
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=98.82 E-value=6.3e-08 Score=83.97 Aligned_cols=84 Identities=14% Similarity=0.079 Sum_probs=56.7
Q ss_pred ccEEEEEecCCCCcccccC----hhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCccc
Q 048438 4 IPLFLCATIGTTAITAVDP----LKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATLD 79 (239)
Q Consensus 4 ~p~~vv~t~gtt~~G~i~p----l~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g 79 (239)
.+.+|++....++.|.+.| +++|.++|++||+++++|.+|++. -....+.....++ ..|.+++ .|.+++...
T Consensus 200 ~~~~vi~ep~~~~~g~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~-r~g~~~~~~~~~~-~pdi~t~--sK~~~~G~~ 275 (429)
T 4e77_A 200 EVACIIVEPVAGNMNCIPPLPEFLPGLRALCDEFGALLIIDEVMTGF-RVALAGAQDYYHV-IPDLTCL--GKIIGGGMP 275 (429)
T ss_dssp TEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEEETTTBT-TTBTTCHHHHTTC-CCSEEEE--EGGGGTTSC
T ss_pred CEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCc-ccCcchHHHhcCC-CCCeeee--cccccCCCC
Confidence 4567777777777899988 999999999999999999999843 1111110012233 2687655 599887666
Q ss_pred ceEEEeeCccccc
Q 048438 80 CCCLWATNPEYLK 92 (239)
Q Consensus 80 ~g~l~~~~~~~l~ 92 (239)
.|+++. +++.+.
T Consensus 276 ~G~~~~-~~~~~~ 287 (429)
T 4e77_A 276 VGAFGG-RREVMN 287 (429)
T ss_dssp CEEEEE-CHHHHT
T ss_pred eEEEEE-CHHHHH
Confidence 787766 344433
No 211
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=98.81 E-value=7e-08 Score=83.72 Aligned_cols=153 Identities=14% Similarity=0.004 Sum_probs=86.5
Q ss_pred ccEEEEEecCCCCcccccC----hhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCccc
Q 048438 4 IPLFLCATIGTTAITAVDP----LKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATLD 79 (239)
Q Consensus 4 ~p~~vv~t~gtt~~G~i~p----l~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g 79 (239)
.+.+|++....++.|.+.| +++|.++|++||+++++|.+|.+. ...........++ ..|.+++ .|.+++...
T Consensus 200 ~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~~~~~~~~~~-~~di~t~--sK~~~~G~~ 275 (429)
T 3k28_A 200 DIACVIVEPVAGNMGVVPPQPGFLEGLREVTEQNGALLIFDEVMTGF-RVAYNCGQGYYGV-TPDLTCL--GKVIGGGLP 275 (429)
T ss_dssp GEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTT-TSSTTHHHHHHTC-CCSEEEE--CGGGGTTSC
T ss_pred CEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCcchHHHHhCC-CCceehh--hhhhcCCCC
Confidence 4567777777788899999 999999999999999999999753 2111000001233 2777765 599877667
Q ss_pred ceEEEeeCcccccccccCCCCccCCCCceecCCCCCChHHHH---HHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCC---
Q 048438 80 CCCLWATNPEYLKNKATESKPVVDYKDWQITLSRSFRSLKLW---FVIRNYGMENLRHFLRSHVNMARLFERLVSGD--- 153 (239)
Q Consensus 80 ~g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~--- 153 (239)
+|+++.+ ++.+....... ......+-....+... .+++.+. ++..++..++.+++++.|+++
T Consensus 276 iG~~~~~-~~~~~~~~~~~-------~~~~~~t~~~~~~a~aaa~aal~~~~----~~~~~~~~~~~~~l~~~L~~~~~~ 343 (429)
T 3k28_A 276 VGAYGGK-AEIMRQVAPSG-------PIYQAGTLSGNPLAMAAGYETLVQLT----PESYVEFERKAEMLEAGLRKAAEK 343 (429)
T ss_dssp CEEEEEC-HHHHTTBTTTS-------SBCCCCTTTTCHHHHHHHHHHHHTCC----HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEc-HHHHhhhccCC-------CccccCCCCCChHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHhh
Confidence 8887764 34433322100 0000001111223333 3444333 455556667777777777653
Q ss_pred -CCeEEEcCCCeeEEEEEEcC
Q 048438 154 -KRFEVVFPCHFAVVCFRVSP 173 (239)
Q Consensus 154 -~g~~~~~~~~~~iv~f~~~~ 173 (239)
+.+..+ +...+++.|.+..
T Consensus 344 ~~~~~~~-~~~g~~~~~~~~~ 363 (429)
T 3k28_A 344 HGIPHHI-NRAGSMIGIFFTD 363 (429)
T ss_dssp TTCCCEE-EEETTEEEEESSS
T ss_pred CCCCEEE-EeeccEEEEEEec
Confidence 222211 2334566676643
No 212
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=98.78 E-value=2.9e-08 Score=85.93 Aligned_cols=192 Identities=13% Similarity=0.005 Sum_probs=101.1
Q ss_pred cEEEE-EecCCCCcccccChh---HHHHHHH-HhCCEEEEecccccccccCc--cccccc-----CCCCCcceEEEcCcc
Q 048438 5 PLFLC-ATIGTTAITAVDPLK---PLCDVAK-QFGIWVHVDAAYAGSACIFP--EFRHFI-----DGVEGADSFSLNAHK 72 (239)
Q Consensus 5 p~~vv-~t~gtt~~G~i~pl~---~i~~i~~-~~gi~lhvD~A~~~~~~~~~--~~~~~~-----~~~~~~Ds~~~~~hK 72 (239)
+-+|+ ....+|.||.+.|.+ +|+++|+ +||+++++|.+|+...+... ...... .+....+++..+++|
T Consensus 179 ~~~v~~~~~~~NPtG~~~~~~~l~~l~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK 258 (422)
T 3d6k_A 179 VKGMWTVPVFGNPTGVTFSEQTCRELAEMSTAAPDFRIVWDNAYALHTLSDEFPIVHNVIEFAQAAGNPNRFWFMSSTSK 258 (422)
T ss_dssp EEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTCEEEEEESTT
T ss_pred CeEEEEcCCCCCCCCCCCCHHHHHHHHHHHhhccCCEEEEECCccccccCCCCCCCcChhhHhhccCCCCcEEEEcChhh
Confidence 44555 566789999999877 7778888 99999999999974222111 011110 111236788999999
Q ss_pred cCCCc-ccceEEEeeCcccccccccCCCCccCCCCceecCCCCCChHHHHHHHHHhCH-H----HHHHHHHHHHHHHHHH
Q 048438 73 WFFAT-LDCCCLWATNPEYLKNKATESKPVVDYKDWQITLSRSFRSLKLWFVIRNYGM-E----NLRHFLRSHVNMARLF 146 (239)
Q Consensus 73 ~l~~P-~g~g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~-~----g~~~~~~~~~~la~~l 146 (239)
+ +.| ..+|+++.. ++.+...... ....+.....+....+...+.. . .+++..++..+..+++
T Consensus 259 ~-~~~GlriG~~~~~-~~l~~~l~~~----------~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l 326 (422)
T 3d6k_A 259 I-THAGSGVSFFASS-KENIEWYASH----------ANVRGIGPNKLNQLAHAQFFGDVAGLKAHMLKHAASLAPKFERV 326 (422)
T ss_dssp T-SCTTSSCEEEECC-HHHHHHHHHH----------HHHHCSCCCHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred h-cCcccceEEEEeC-HHHHHHHHHH----------HHhhcCCCCHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHH
Confidence 9 455 347888764 3333222100 0000000112333333333322 1 2223333333344444
Q ss_pred HHHH----hCCCCeEEEcCCCeeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhcCcEEEE-EEEE-
Q 048438 147 ERLV----SGDKRFEVVFPCHFAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINASGKAYMT-NVVL- 220 (239)
Q Consensus 147 ~~~l----~~~~g~~~~~~~~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~-~~~~- 220 (239)
.+.| .+.+++++..+...+.+.+.++... ...+.+.|.++|..+.. ....
T Consensus 327 ~~~L~~~l~~~~~~~~~~p~~g~~~~~~~~~~~------------------------~~~~~~~l~~~gV~v~~~g~~f~ 382 (422)
T 3d6k_A 327 LEILDSRLSEYGVAKWTSPTGGYFISVDVVPGT------------------------ASRVVELAKEAGIALTGAGSSFP 382 (422)
T ss_dssp HHHHHHHHGGGTCEEECCCSBSSCEEEEESTTC------------------------HHHHHHHHHHTTEECCCTTTTSG
T ss_pred HHHHHHhcCcCCceEEeCCCcceEEEEECCCCC------------------------HHHHHHHHHHCCeEEEcCccccC
Confidence 4444 3344467665555667777775421 11445566666655443 1111
Q ss_pred ----CCEeEEEEEecC
Q 048438 221 ----GGIYAIRFATGA 232 (239)
Q Consensus 221 ----~g~~~lR~~~~~ 232 (239)
.+..++|+++..
T Consensus 383 ~~~~~~~~~iRis~~~ 398 (422)
T 3d6k_A 383 LHNDPNNENIRLAPSL 398 (422)
T ss_dssp GGCCTTSCEEEECCSS
T ss_pred CCCCCCCCeEEEecCC
Confidence 135789999876
No 213
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=98.76 E-value=2.3e-08 Score=86.31 Aligned_cols=186 Identities=9% Similarity=0.010 Sum_probs=97.2
Q ss_pred EEEEEecC-CCCcccccChhHHH---HHHH------HhCCEEEEecccccccccCccccc---ccCCCCCcc---eEEEc
Q 048438 6 LFLCATIG-TTAITAVDPLKPLC---DVAK------QFGIWVHVDAAYAGSACIFPEFRH---FIDGVEGAD---SFSLN 69 (239)
Q Consensus 6 ~~vv~t~g-tt~~G~i~pl~~i~---~i~~------~~gi~lhvD~A~~~~~~~~~~~~~---~~~~~~~~D---s~~~~ 69 (239)
.+|+++.. +|.+|.+.|.+++. ++|+ +||+++++|.+|............ ...++. -| +++.+
T Consensus 181 ~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~S 259 (418)
T 3rq1_A 181 VVVIFNTPGNNPTGYSIEDKDWDSILNFLKDLVAIGRNNVIIGIDVAYLDYSGEKDEVRAFFNKFSHLP-KEILTCVCYS 259 (418)
T ss_dssp EEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTSSCEEEEEEECTTGGGSSCHHHHHGGGGGGTTCC-TTEEEEEEEE
T ss_pred EEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHhhhccCCCeEEEEecccccccCChHHHHHHHHHHHhcC-CCceEEEEEe
Confidence 35666666 89999998866655 5555 899999999998654321110011 112221 23 66789
Q ss_pred CcccCCCc-ccceEEEe--eCcccccccccCCCCccCCCCceecCCCCCChHHHHHHHHHhCH--------HHHHHHHHH
Q 048438 70 AHKWFFAT-LDCCCLWA--TNPEYLKNKATESKPVVDYKDWQITLSRSFRSLKLWFVIRNYGM--------ENLRHFLRS 138 (239)
Q Consensus 70 ~hK~l~~P-~g~g~l~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~--------~g~~~~~~~ 138 (239)
++|.++.| ...|+++. ++++.+....... .. ...........+....+...+.. +..++..++
T Consensus 260 ~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~-~~-----~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~ 333 (418)
T 3rq1_A 260 LSKGFTMYGQRVGAMIGISDDEEIADEFFEVN-KS-----TSRATWSNICRPAMRTMANIVADPAKFKEYEAERNCYYQL 333 (418)
T ss_dssp STTTTTCCSSCCEEEEEEESSHHHHHHHHHHH-HH-----HHHHHTSSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCcCcCCcceEEEEEeCCHHHHHHHHHHH-HH-----HHhhccCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 99998644 34677665 2443332221000 00 00000001122222332222221 122344556
Q ss_pred HHHHHHHHHHHHhCCCCeEEEcCCCeeEEEE-EEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhcCcEEEEE
Q 048438 139 HVNMARLFERLVSGDKRFEVVFPCHFAVVCF-RVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINASGKAYMTN 217 (239)
Q Consensus 139 ~~~la~~l~~~l~~~~g~~~~~~~~~~iv~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~ 217 (239)
..++.+++.+.|+++ |++++ +++.++..+ .+++ ...+.+.|.++|....+
T Consensus 334 ~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~~--------------------------~~~~~~~l~~~gi~v~~- 384 (418)
T 3rq1_A 334 IRDRADIFKQEAAQV-GLPML-PYRGGFFITIPTDS--------------------------ANAICEELKKEHIYVIA- 384 (418)
T ss_dssp HHHHHHHHHHHHHHH-TCCCC-CCCSSSEEEEECTT--------------------------HHHHHHHHHHTTEECEE-
T ss_pred HHHHHHHHHHHHHhc-CCCCC-CCCceEEEEcCCCC--------------------------HHHHHHHHHhCCEEEec-
Confidence 677788888888876 77765 444454333 2211 11455566666665443
Q ss_pred EEECCEeEEEEEec
Q 048438 218 VVLGGIYAIRFATG 231 (239)
Q Consensus 218 ~~~~g~~~lR~~~~ 231 (239)
|..++|+++.
T Consensus 385 ----g~~~iRis~~ 394 (418)
T 3rq1_A 385 ----LANGIRIAAC 394 (418)
T ss_dssp ----CSSEEEEEGG
T ss_pred ----CCCCeEEEEe
Confidence 3457999965
No 214
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=98.76 E-value=6.8e-08 Score=84.41 Aligned_cols=159 Identities=10% Similarity=-0.045 Sum_probs=86.6
Q ss_pred ccEEEEEecCCCCcccccC----hhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCccc
Q 048438 4 IPLFLCATIGTTAITAVDP----LKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATLD 79 (239)
Q Consensus 4 ~p~~vv~t~gtt~~G~i~p----l~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g 79 (239)
.+.+|+++...+++|.+.| +++|.++|++||+++++|.+|++. .....+.....++ ..|.++ +.|++++...
T Consensus 201 ~~~~vi~ep~~~~tG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~-~~g~~~~~~~~~~-~~di~s--~sK~l~~G~~ 276 (453)
T 2cy8_A 201 DIAAFIAEPVGSHFGVTPVSDSFLREGAELARQYGALFILDEVISGF-RVGNHGMQALLDV-QPDLTC--LAKASAGGLP 276 (453)
T ss_dssp GEEEEEECSSEHHHHTEECCHHHHHHHHHHHHHTTCEEEEECTTTTT-TTCTTHHHHHHTC-CCSEEE--EEGGGGTTSS
T ss_pred CEEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecCcccc-ccCchhhhHHhCC-CCcEEE--EChhhhCCcc
Confidence 3566666666566898888 999999999999999999999843 2111000001233 278764 5599987566
Q ss_pred ceEEEeeCcccccccccCCCCccCCCCceecCCCCCChHHHHHHHHH-hCHHHHHHHHHHHHHHHHHHHHHHhCCC---C
Q 048438 80 CCCLWATNPEYLKNKATESKPVVDYKDWQITLSRSFRSLKLWFVIRN-YGMENLRHFLRSHVNMARLFERLVSGDK---R 155 (239)
Q Consensus 80 ~g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g~~g~~~~~~~~~~la~~l~~~l~~~~---g 155 (239)
.|+++.+ ++.+........... .......+..........+++. + . ++..++..++.+++.+.|+++. +
T Consensus 277 ~G~v~~~-~~~~~~l~~~~~~~~--~~~~t~~~n~~~~aa~~aal~~~~-~---~~~~~~~~~~~~~l~~~L~~~~~~~~ 349 (453)
T 2cy8_A 277 GGILGGR-EDVMGVLSRGSDRKV--LHQGTFTGNPITAAAAIAAIDTIL-E---DDVCAKINDLGQFAREAMNHLFARKG 349 (453)
T ss_dssp CEEEEEC-HHHHTTSSSCC-----------CCCCHHHHHHHHHHHHHHH-H---TTHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred eEEEech-HHHHHHhccccCCCc--eeCCCCCCCHHHHHHHHHHHHHHh-h---hhHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 8888875 344333221000000 0000000111112223334544 4 2 3445566678888888876531 3
Q ss_pred eEEEcCCCeeEEEEEEcC
Q 048438 156 FEVVFPCHFAVVCFRVSP 173 (239)
Q Consensus 156 ~~~~~~~~~~iv~f~~~~ 173 (239)
+....++..+++.+.+++
T Consensus 350 ~~~~~~~~g~~~~i~~~~ 367 (453)
T 2cy8_A 350 LNWLAYGRFSGFHLMPGL 367 (453)
T ss_dssp CCEEEECCTTEEEEEETS
T ss_pred CcEEEEEeeeEEEEEEec
Confidence 322124455678888764
No 215
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=98.73 E-value=8.8e-09 Score=88.69 Aligned_cols=146 Identities=12% Similarity=0.047 Sum_probs=83.4
Q ss_pred cEEEEEecCCCCcccccC---hhHHHHHHHHhCCEEEEecccccccccC---c--ccccccCCCCCcceEEEcCcccCCC
Q 048438 5 PLFLCATIGTTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSACIF---P--EFRHFIDGVEGADSFSLNAHKWFFA 76 (239)
Q Consensus 5 p~~vv~t~gtt~~G~i~p---l~~i~~i~~~~gi~lhvD~A~~~~~~~~---~--~~~~~~~~~~~~Ds~~~~~hK~l~~ 76 (239)
..+|+.+..+|.+|.+.| +++|+++|++||+++++|.+|....... + .... +.....-++++.++||.++
T Consensus 184 ~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~s~sK~~~- 261 (412)
T 1ajs_A 184 SIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRY-FVSEGFELFCAQSFSKNFG- 261 (412)
T ss_dssp CEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHH-HHHTTCCEEEEEECTTTSC-
T ss_pred cEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccccccCCcccccchHHHH-HhccCCcEEEEEecccccC-
Confidence 466777888999999855 6689999999999999999976543211 0 0110 1111113478899999865
Q ss_pred ccc--ceEEEee--Ccc----cccccccCCCCccCCCCceecCCCCCChHHHHHHHHHhC-----HHHHHHHHHHHHHHH
Q 048438 77 TLD--CCCLWAT--NPE----YLKNKATESKPVVDYKDWQITLSRSFRSLKLWFVIRNYG-----MENLRHFLRSHVNMA 143 (239)
Q Consensus 77 P~g--~g~l~~~--~~~----~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g-----~~g~~~~~~~~~~la 143 (239)
|.| +|++++. +++ +....... ...............+..+++... .+.+++..++..++.
T Consensus 262 ~~G~riG~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 334 (412)
T 1ajs_A 262 LYNERVGNLTVVAKEPDSILRVLSQMQKI-------VRVTWSNPPAQGARIVARTLSDPELFHEWTGNVKTMADRILSMR 334 (412)
T ss_dssp CGGGCEEEEEEECSSHHHHHHHHHHHHHH-------HHTTTSSCCSHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcceEEEEEecCCHHHHHHHHHHHHHH-------HhcccCCCChHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHH
Confidence 555 6888772 333 22111100 000000001111222223333221 235567777888899
Q ss_pred HHHHHHHhCCC---CeEEE
Q 048438 144 RLFERLVSGDK---RFEVV 159 (239)
Q Consensus 144 ~~l~~~l~~~~---g~~~~ 159 (239)
+++.+.|++.. ++++.
T Consensus 335 ~~l~~~L~~~~~~~~~~~~ 353 (412)
T 1ajs_A 335 SELRARLEALKTPGTWNHI 353 (412)
T ss_dssp HHHHHHHHHTTCSSCCHHH
T ss_pred HHHHHHHHhhCCCCCeeEE
Confidence 99999998863 36554
No 216
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=98.71 E-value=1.9e-07 Score=82.81 Aligned_cols=157 Identities=13% Similarity=0.106 Sum_probs=88.5
Q ss_pred ccEEEEEecCCCCcccccC---hhHHHHHHHHhCCEEEEecccccccccCc-cc---ccccCCC-----CCcc-eEEEcC
Q 048438 4 IPLFLCATIGTTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSACIFP-EF---RHFIDGV-----EGAD-SFSLNA 70 (239)
Q Consensus 4 ~p~~vv~t~gtt~~G~i~p---l~~i~~i~~~~gi~lhvD~A~~~~~~~~~-~~---~~~~~~~-----~~~D-s~~~~~ 70 (239)
.+-+|+++..+|.||.+.+ +++|+++|++||+++++|.+|+.....-. .. ......+ ..+. ++..++
T Consensus 235 ~~k~i~l~np~NPTG~v~s~~~l~~i~~la~~~~~~li~De~y~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~S~ 314 (498)
T 3ihj_A 235 DPKVLCIINPGNPTGQVQSRKCIEDVIHFAWEEKLFLLADEVYQDNVYSPDCRFHSFKKVLYEMGPEYSSNVELASFHST 314 (498)
T ss_dssp EEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTCHHHHTTCCEEEEEES
T ss_pred CCeEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCcEEEEEcCccccccCCCCCcCCHHHHHHHhcccccCceeEEEEecc
Confidence 4667777788899999855 67799999999999999999986544211 11 1111100 0122 355699
Q ss_pred cccCCCc--ccceEEEe--eCcccccccccCCCCccCCCCceecCCCCCChHHHHHHHHHhC------------HHHHHH
Q 048438 71 HKWFFAT--LDCCCLWA--TNPEYLKNKATESKPVVDYKDWQITLSRSFRSLKLWFVIRNYG------------MENLRH 134 (239)
Q Consensus 71 hK~l~~P--~g~g~l~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g------------~~g~~~ 134 (239)
+|.+.+. ...|++.+ .++......... .....+ ...+........+. .+...+
T Consensus 315 SK~~~G~~G~R~G~~~~~~~~~~l~~~l~~~---------~~~~~~--~~~~~q~a~~~~l~~~~~g~~~~~~~~~~~~~ 383 (498)
T 3ihj_A 315 SKGYMGECGYRGGYMEVINLHPEIKGQLVKL---------LSVRLC--PPVSGQAAMDIVVNPPVAGEESFEQFSREKES 383 (498)
T ss_dssp SSSTTCCSSSCCEEEEEESCCHHHHHHHHHH---------HHHSCC--CCHHHHHHHHHHTCCCCTTSTTHHHHHHHHHH
T ss_pred ccccccCcccceEEEEEecCCHHHHHHHHHH---------HhccCC--CCHHHHHHHHHHhcCCccCcccHHHHHHHHHH
Confidence 9998432 33566654 343333222100 000000 01122222222221 122345
Q ss_pred HHHHHHHHHHHHHHHHhCCCCeEEEcCCCeeEEEE-EEc
Q 048438 135 FLRSHVNMARLFERLVSGDKRFEVVFPCHFAVVCF-RVS 172 (239)
Q Consensus 135 ~~~~~~~la~~l~~~l~~~~g~~~~~~~~~~iv~f-~~~ 172 (239)
+.++..+.++++.+.|+++||+++. +++.++..| ++.
T Consensus 384 ~~~~l~~~~~~l~~~L~~~~g~~~~-~p~gg~~~~~~l~ 421 (498)
T 3ihj_A 384 VLGNLAKKAKLTEDLFNQVPGIHCN-PLQGAMYAFPRIF 421 (498)
T ss_dssp HHHHHHHHHHHHHHHHHTSTTEECC-CCCBSSEECCEEC
T ss_pred HHHHHHHHHHHHHHHHhcCCCcEec-CCCeEEEEEEecc
Confidence 5567778899999999998898875 556666555 443
No 217
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=98.69 E-value=3.6e-08 Score=84.32 Aligned_cols=149 Identities=14% Similarity=0.090 Sum_probs=82.9
Q ss_pred ccEEEEEecCCCCcccc---cChhHHHHHHHHhCCEEEEecccccccccCc-cccc--ccCCCCCcceEEEcCcccCCCc
Q 048438 4 IPLFLCATIGTTAITAV---DPLKPLCDVAKQFGIWVHVDAAYAGSACIFP-EFRH--FIDGVEGADSFSLNAHKWFFAT 77 (239)
Q Consensus 4 ~p~~vv~t~gtt~~G~i---~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~-~~~~--~~~~~~~~Ds~~~~~hK~l~~P 77 (239)
...+++.+..+|.+|.+ +++++|+++|++||+++++|.+|+....... .... ...+.....+++.+++|.++ +
T Consensus 173 ~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~-~ 251 (397)
T 3fsl_A 173 GSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIASAGLPALVSNSFSKIFS-L 251 (397)
T ss_dssp TCEEEECSSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCCEEEEEECTTTTT-C
T ss_pred CCEEEEeCCCCCCCCcCCCHHHHHHHHHHHHhCCEEEEEecCchhhccCcccccHHHHHHHhcCCCEEEEeccccccc-C
Confidence 35677778889999998 4566999999999999999999976543210 0010 01111235677889999975 3
Q ss_pred cc--ceEEEe--eCcccccccccCCCCccCCCCceecCCCCCChHHHHHHHHHhC--------HHHHHHHHHHHHHHHHH
Q 048438 78 LD--CCCLWA--TNPEYLKNKATESKPVVDYKDWQITLSRSFRSLKLWFVIRNYG--------MENLRHFLRSHVNMARL 145 (239)
Q Consensus 78 ~g--~g~l~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g--------~~g~~~~~~~~~~la~~ 145 (239)
.| +|++++ .+++.+........... ....+. ...+....+...+. .+.+++..++..++.++
T Consensus 252 ~G~riG~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~-~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~ 325 (397)
T 3fsl_A 252 YGERVGGLSVMCEDAEAAGRVLGQLKATV-----RRNYSS-PPNFGAQVVAAVLNDEALKASWLKEVEEMRTRILAMRQE 325 (397)
T ss_dssp GGGCCEEEEEECSSHHHHHHHHHHHHHHH-----HTTTSS-CCSHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCeeEEEEecCCHHHHHHHHHHHHHHH-----HhccCC-CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34 677764 23332221100000000 000000 01111121111111 34556777778888999
Q ss_pred HHHHHhCCC---CeEEE
Q 048438 146 FERLVSGDK---RFEVV 159 (239)
Q Consensus 146 l~~~l~~~~---g~~~~ 159 (239)
+.+.|++.+ ++++.
T Consensus 326 l~~~L~~~~~~~~~~~~ 342 (397)
T 3fsl_A 326 LVKVLSTEMPERNFDYL 342 (397)
T ss_dssp HHHHHHHHCTTSCCTHH
T ss_pred HHHHHHhcCCCCCceee
Confidence 999998764 55544
No 218
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=98.65 E-value=5.9e-09 Score=89.21 Aligned_cols=79 Identities=18% Similarity=0.109 Sum_probs=53.4
Q ss_pred cEEEEEecCCCCcccccC---hhHHHHHHHHhCCEEEEecccccccccC--c--ccccccCCCCCcceEEEcCcccCCCc
Q 048438 5 PLFLCATIGTTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSACIF--P--EFRHFIDGVEGADSFSLNAHKWFFAT 77 (239)
Q Consensus 5 p~~vv~t~gtt~~G~i~p---l~~i~~i~~~~gi~lhvD~A~~~~~~~~--~--~~~~~~~~~~~~Ds~~~~~hK~l~~P 77 (239)
..+++.+..+|.+|.+.| +++|+++|++||+++++|.+|+...... + .... +.....-++++.++||+++ +
T Consensus 170 ~~~~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~s~sK~~~-~ 247 (394)
T 2ay1_A 170 DMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTRL-IASRIPEVLIAASCSKNFG-I 247 (394)
T ss_dssp CEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHHHHH-HHHHCSSEEEEEECTTTTT-C
T ss_pred CEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecCccccccCcccchHHHHH-HhhcCCCEEEEEeccCCCc-C
Confidence 466777888999999876 5578999999999999999998653310 0 0000 1111112356779999976 3
Q ss_pred cc--ceEEEe
Q 048438 78 LD--CCCLWA 85 (239)
Q Consensus 78 ~g--~g~l~~ 85 (239)
.| +|++++
T Consensus 248 ~G~riG~~~~ 257 (394)
T 2ay1_A 248 YRERTGCLLA 257 (394)
T ss_dssp GGGCEEEEEE
T ss_pred cCCccceEEE
Confidence 44 588876
No 219
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=98.63 E-value=1.5e-08 Score=87.34 Aligned_cols=155 Identities=9% Similarity=0.013 Sum_probs=85.1
Q ss_pred cEEEEEecCCCCcccccC---hhHHHHHHHHhCCEEEEecccccccccC---c--ccccccCCCCC---cceEEEcCccc
Q 048438 5 PLFLCATIGTTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSACIF---P--EFRHFIDGVEG---ADSFSLNAHKW 73 (239)
Q Consensus 5 p~~vv~t~gtt~~G~i~p---l~~i~~i~~~~gi~lhvD~A~~~~~~~~---~--~~~~~~~~~~~---~Ds~~~~~hK~ 73 (239)
..+++.+..+|.||.+.| +++|+++|++||+++++|.+|+...... + .... +..... -++++.+++|.
T Consensus 177 ~~~~~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~s~sK~ 255 (412)
T 1yaa_A 177 SIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVRL-GVEKLSTVSPVFVCQSFAKN 255 (412)
T ss_dssp CEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHTHHHHH-HHHHTTTTCCEEEEEECTTT
T ss_pred CEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCcccchhHHHHH-HHhcCCCCcceEEEeccCCC
Confidence 356666888999999865 6678999999999999999986432210 0 0000 111111 34678899998
Q ss_pred CCCccc--ceEEE--e----eCcc----cccccccCCCCccCCCCceecCCCCCChHHHHHHHHHhC-----HHHHHHHH
Q 048438 74 FFATLD--CCCLW--A----TNPE----YLKNKATESKPVVDYKDWQITLSRSFRSLKLWFVIRNYG-----MENLRHFL 136 (239)
Q Consensus 74 l~~P~g--~g~l~--~----~~~~----~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g-----~~g~~~~~ 136 (239)
++ |.| +|+++ . ++++ .+...... .. ..+ .....+....+..+++... .+.+++..
T Consensus 256 ~~-~~GlriG~~~~~~~~~~~~~~~~~~l~~~l~~~----~~-~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~ 327 (412)
T 1yaa_A 256 AG-MYGERVGCFHLALTKQAQNKTIKPAVTSQLAKI----IR-SEV--SNPPAYGAKIVAKLLETPELTEQWHKDMVTMS 327 (412)
T ss_dssp SC-CGGGCEEEEEEECCSCTTHHHHHHHHHHHHHHH----HH-TTT--SSCCHHHHHHHHHHHHSHHHHHHHHHHHHHHH
T ss_pred CC-CcCCcceEEEEEecCCCCCHHHHHHHHHHHHHH----Hh-hcc--CCCChHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 75 666 57776 4 1333 32221100 00 000 0000011122222333211 13566777
Q ss_pred HHHHHHHHHHHHHHhCCC---CeEEEcCCCeeEEEE
Q 048438 137 RSHVNMARLFERLVSGDK---RFEVVFPCHFAVVCF 169 (239)
Q Consensus 137 ~~~~~la~~l~~~l~~~~---g~~~~~~~~~~iv~f 169 (239)
++..++.+++.+.|++.+ +++++ +++.++..|
T Consensus 328 ~~~~~~~~~l~~~L~~~~~~~~~~~~-~~~~~~~~~ 362 (412)
T 1yaa_A 328 SRITKMRHALRDHLVKLGTPGNWDHI-VNQCGMFSF 362 (412)
T ss_dssp HHHHHHHHHHHHHHHHHTCSSCCTHH-HHCCSSEEE
T ss_pred HHHHHHHHHHHHHHHhhCCCCCeeee-ccCceEEEe
Confidence 778888999999998763 36554 334444433
No 220
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=98.61 E-value=7.5e-07 Score=77.03 Aligned_cols=154 Identities=12% Similarity=0.034 Sum_probs=85.8
Q ss_pred ccEEEEEecCCCCcccccC----hhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCccc
Q 048438 4 IPLFLCATIGTTAITAVDP----LKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATLD 79 (239)
Q Consensus 4 ~p~~vv~t~gtt~~G~i~p----l~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g 79 (239)
.+.+|+++...+++|.+.| +++|.++ ++||+++++|.+|++. .....+.....++ ..|.+ +++|++++...
T Consensus 199 ~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l-~~~g~~lI~DEv~~g~-~~g~~~~~~~~~~-~~di~--s~sK~l~~G~~ 273 (424)
T 2e7u_A 199 EIAAIIFEPVVGNAGVLVPTEDFLKALHEA-KAYGVLLIADEVMTGF-RLAFGGATELLGL-KPDLV--TLGKILGGGLP 273 (424)
T ss_dssp GEEEEEECSSBCTTSCBCCCHHHHHHHHHG-GGGTCEEEEECTTTTT-TSSTTHHHHHHTC-CCSEE--EECGGGGTTSS
T ss_pred CEEEEEEeCCCCCCCCcCCCHHHHHHHHHH-HHcCCEEEEecCcccc-ccchhHHHHHhCC-Ccchh--hhhhhhhCCcc
Confidence 4566767666666899888 9999999 9999999999999843 2111110001233 27866 55799987555
Q ss_pred ceEEEeeCcccccccccCCCCccCCCCceecCCC-CCChHHH---HHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCC--
Q 048438 80 CCCLWATNPEYLKNKATESKPVVDYKDWQITLSR-SFRSLKL---WFVIRNYGMENLRHFLRSHVNMARLFERLVSGD-- 153 (239)
Q Consensus 80 ~g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~-- 153 (239)
.|+++.+ ++.+....... . ....+. ....+.. ..+++.+.. .++..++..++.+++.+.|+++
T Consensus 274 ~G~~~~~-~~~~~~~~~~~-~-------~~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~~l~~~L~~~~~ 342 (424)
T 2e7u_A 274 AAAYAGR-REIMEKVAPLG-P-------VYQAGTLSGNPLAMAAGLATLELLEE--NPGYYAYLEDLGARLEAGLKEVLK 342 (424)
T ss_dssp CEEEEEC-HHHHTTBTTTS-S-------BCCCCTTCSCHHHHHHHHHHHHHHHH--CTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEc-HHHHhhhcccC-C-------cccCCCCCCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHHHHHH
Confidence 7877764 34443322100 0 000111 1122322 233443322 1345666668888888888663
Q ss_pred -CCeEEEcCCCeeEEEEEEcC
Q 048438 154 -KRFEVVFPCHFAVVCFRVSP 173 (239)
Q Consensus 154 -~g~~~~~~~~~~iv~f~~~~ 173 (239)
.++....++..+++.+.++.
T Consensus 343 ~~~~~~~~~~~g~~~~i~~~~ 363 (424)
T 2e7u_A 343 EKGLPHTVNRVGSMITVFFTE 363 (424)
T ss_dssp HTTCCCEEEEETTEEEEESSS
T ss_pred hCCCceEEEeeceEEEEEEeC
Confidence 13321113344577777653
No 221
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=98.60 E-value=1.1e-07 Score=83.15 Aligned_cols=78 Identities=23% Similarity=0.186 Sum_probs=52.3
Q ss_pred ccEEEEEecCCCCcccccC---hhHHHHHHHHhCCEEEEecccccccccC---ccc--ccccCCCCCcceEEEcCcccCC
Q 048438 4 IPLFLCATIGTTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSACIF---PEF--RHFIDGVEGADSFSLNAHKWFF 75 (239)
Q Consensus 4 ~p~~vv~t~gtt~~G~i~p---l~~i~~i~~~~gi~lhvD~A~~~~~~~~---~~~--~~~~~~~~~~Ds~~~~~hK~l~ 75 (239)
...+++.+..+|.||.+.+ +++|+++|++||+++++|.+|......- +.. ..... ...-..++.++||.++
T Consensus 202 ~~~~v~~~~p~NPtG~~~~~~~l~~i~~l~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~S~SK~~g 280 (448)
T 3meb_A 202 KSIFLFHACAHNPSGIDFTEAQWKELLPIMKEKKHIAFFDSAYQGFATGSFEADAFAVRMFVD-AGVEVLVAQSFSKNFG 280 (448)
T ss_dssp TCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTSSSCHHHHTHHHHHHHH-TTCCEEEEEECTTTSC
T ss_pred CcEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEecccccccCCCcccCchhHHHHhh-cCCcEEEEecccccCC
Confidence 3567788888999999877 4559999999999999999987543221 000 10111 1113356889999976
Q ss_pred Cccc--ceEE
Q 048438 76 ATLD--CCCL 83 (239)
Q Consensus 76 ~P~g--~g~l 83 (239)
. .| +|.+
T Consensus 281 ~-~G~RiG~l 289 (448)
T 3meb_A 281 L-YGERIGCL 289 (448)
T ss_dssp C-GGGCCEEE
T ss_pred C-ccccceee
Confidence 3 34 6766
No 222
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=98.59 E-value=9.7e-08 Score=81.99 Aligned_cols=140 Identities=11% Similarity=-0.046 Sum_probs=77.9
Q ss_pred cEEEEEecCCCCcccccChhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCccc--ceE
Q 048438 5 PLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATLD--CCC 82 (239)
Q Consensus 5 p~~vv~t~gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g--~g~ 82 (239)
+-+|+++..+|.||.+.+ +|++.++++++++++|.+|+.... .. +......++++.++||.++ +.| +|+
T Consensus 158 ~k~v~l~~p~NPtG~~~~--~l~~~~~~~~~~ii~De~y~~~~~--~~----l~~~~~~~i~~~S~SK~~g-~~GlRiG~ 228 (391)
T 3bwn_A 158 PYIELVTSPNNPDGTIRE--TVVNRPDDDEAKVIHDFAYYWPHY--TP----ITRRQDHDIMLFTFSKITG-HAGSRIGW 228 (391)
T ss_dssp CEEEEEESSCTTTCCCCC--CCC-----CCCEEEEECTTCSTTT--SC----CCCCBCCSEEEEEHHHHHS-CGGGCEEE
T ss_pred CEEEEECCCCCCCchhHH--HHHHHhhcCCCEEEEeCCCCCCCC--Cc----cccCCCCeEEEEechhhcC-CCccceEE
Confidence 456667888999999986 565422333499999999974211 10 1111237899999999865 445 488
Q ss_pred EEeeCcccccccccCCCCccCCCCceecCCCC-CChHHHHHHHHHhC---------HHHHHHHHHHHHHHHHHHHHHHhC
Q 048438 83 LWATNPEYLKNKATESKPVVDYKDWQITLSRS-FRSLKLWFVIRNYG---------MENLRHFLRSHVNMARLFERLVSG 152 (239)
Q Consensus 83 l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~g---------~~g~~~~~~~~~~la~~l~~~l~~ 152 (239)
+++.+++.+...... .... ..+.. +....+..+++... .+.+++..++..+..+++.+.|++
T Consensus 229 ~~~~~~~l~~~l~~~-------~~~~-~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 300 (391)
T 3bwn_A 229 ALVKDKEVAKKMVEY-------IIVN-SIGVSKESQVRTAKILNVLKETCKSESESENFFKYGREMMKNRWEKLREVVKE 300 (391)
T ss_dssp EEECCHHHHHHHHHH-------HHHH-HSSCCHHHHHHHHHHHHHHHHHTTCCCTTTSHHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEecCHHHHHHHHHH-------hccc-ccCCCHHHHHHHHHHHhCcchhccccccHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 776444443322110 0000 00111 11122222333210 234566677777888999999999
Q ss_pred CCCeEEEcC
Q 048438 153 DKRFEVVFP 161 (239)
Q Consensus 153 ~~g~~~~~~ 161 (239)
.+++++..+
T Consensus 301 ~~~~~~~~p 309 (391)
T 3bwn_A 301 SDAFTLPKY 309 (391)
T ss_dssp CSSEECCCC
T ss_pred CCCcccccC
Confidence 878876543
No 223
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=98.57 E-value=2.5e-08 Score=86.29 Aligned_cols=152 Identities=9% Similarity=-0.004 Sum_probs=83.8
Q ss_pred ccEEEEEecCCCCcccccC---hhHHHHHHHHhCCEEEEecccccccccCcc-ccc--ccCCCCCcceEEEcCcccCCCc
Q 048438 4 IPLFLCATIGTTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSACIFPE-FRH--FIDGVEGADSFSLNAHKWFFAT 77 (239)
Q Consensus 4 ~p~~vv~t~gtt~~G~i~p---l~~i~~i~~~~gi~lhvD~A~~~~~~~~~~-~~~--~~~~~~~~Ds~~~~~hK~l~~P 77 (239)
...+++.+..+|.||.+.+ +++|+++|++||+++++|.+|+......+. ... ...+....+.++.+++|.++ +
T Consensus 195 ~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~-~ 273 (420)
T 4f4e_A 195 GTIVVLHACCHNPTGVDLNDAQWAQVVEVVKARRLVPFLDIAYQGFGESIEADAAAVRLFAAANLNVFVSSSFSKSFS-L 273 (420)
T ss_dssp TCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCCEEEEEECTTTTT-C
T ss_pred CCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEccccccccCCcchhhHHHHHHHhcCCCEEEEEeCCccCc-C
Confidence 3578888889999999854 678999999999999999999765442110 100 01112236788899999976 3
Q ss_pred cc--ceEEEe--eCcccccccccCCCCccCCCCceecCCCCCChHHHHHHHHHhC-----HHHHHHHHHHHHHHHHHHHH
Q 048438 78 LD--CCCLWA--TNPEYLKNKATESKPVVDYKDWQITLSRSFRSLKLWFVIRNYG-----MENLRHFLRSHVNMARLFER 148 (239)
Q Consensus 78 ~g--~g~l~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g-----~~g~~~~~~~~~~la~~l~~ 148 (239)
.| +|++++ .+++.+...... ................+......+.... .+.+++..++..++.+++.+
T Consensus 274 ~G~RiG~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~ 350 (420)
T 4f4e_A 274 YGERVGALSIITDSKDEAARVLSQ---LKRVIRTNYSNPPTHGGAIVAAVLASPELRASWVQELGEMRDRIRAMRNGLVE 350 (420)
T ss_dssp GGGCEEEEEEECSSHHHHHHHHHH---HHHHHHTTTSSCCSHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCcEEEEEEcCCHHHHHHHHHH---HHHHHhcccCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34 677764 233322111000 0000000000000111111112222111 23456677778888999999
Q ss_pred HHhCC---CCeEEE
Q 048438 149 LVSGD---KRFEVV 159 (239)
Q Consensus 149 ~l~~~---~g~~~~ 159 (239)
.|++. +++++.
T Consensus 351 ~L~~~~~~~~~~~~ 364 (420)
T 4f4e_A 351 RLKAAGIERDFSFI 364 (420)
T ss_dssp HHHHTTCSSCCTHH
T ss_pred HHHhcCCCCCceeE
Confidence 99876 355544
No 224
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=98.56 E-value=5.3e-08 Score=83.47 Aligned_cols=80 Identities=20% Similarity=0.106 Sum_probs=55.0
Q ss_pred ccEEEEEecCCCCccccc---ChhHHHHHHHHhCCEEEEecccccccccCc---c--cccccCCCCCcceEEEcCcccCC
Q 048438 4 IPLFLCATIGTTAITAVD---PLKPLCDVAKQFGIWVHVDAAYAGSACIFP---E--FRHFIDGVEGADSFSLNAHKWFF 75 (239)
Q Consensus 4 ~p~~vv~t~gtt~~G~i~---pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~---~--~~~~~~~~~~~Ds~~~~~hK~l~ 75 (239)
.+.+|+.+..+|.||.+. ++++|+++|++||+++++|.+|......-. . ..... ....-.+++.++||.++
T Consensus 175 ~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~S~sK~~~ 253 (401)
T 7aat_A 175 KSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFI-EQGIDVVLSQSYAKNMG 253 (401)
T ss_dssp TCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHH-HTTCCCEEEEECTTTSC
T ss_pred CcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEccccccccCCCccccHHHHHHHH-hcCCcEEEEecCCcccc
Confidence 356788888999999754 488899999999999999999875433110 0 00001 11235678899999975
Q ss_pred Cccc--ceEEEe
Q 048438 76 ATLD--CCCLWA 85 (239)
Q Consensus 76 ~P~g--~g~l~~ 85 (239)
+.| +|++++
T Consensus 254 -~~G~RiG~l~~ 264 (401)
T 7aat_A 254 -LYGERAGAFTV 264 (401)
T ss_dssp -CGGGCEEEEEE
T ss_pred -cccCceEEEEE
Confidence 445 677775
No 225
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=98.52 E-value=7.1e-08 Score=82.40 Aligned_cols=150 Identities=12% Similarity=0.050 Sum_probs=84.2
Q ss_pred cEEEEEecCCCCcccccC---hhHHHHHHHHhCCEEEEecccccccccC--c--ccccccCCCCCcceEEEcCcccCCCc
Q 048438 5 PLFLCATIGTTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSACIF--P--EFRHFIDGVEGADSFSLNAHKWFFAT 77 (239)
Q Consensus 5 p~~vv~t~gtt~~G~i~p---l~~i~~i~~~~gi~lhvD~A~~~~~~~~--~--~~~~~~~~~~~~Ds~~~~~hK~l~~P 77 (239)
..+++.+..+|.+|.+.| +++|+++|++||+++++|.+|+...... + .... +......++++.++||.++ +
T Consensus 173 ~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~s~sK~~~-~ 250 (396)
T 2q7w_A 173 DVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRA-FAAMHKELIVASSYSXNFG-L 250 (396)
T ss_dssp CEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHHHTHHHHH-HHHHCSCEEEEEECTTTTT-C
T ss_pred CEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCccchhHHHHH-HHhcCCcEEEEEecccccc-c
Confidence 467777888999999866 5679999999999999999987643210 0 0110 1111124577899999875 4
Q ss_pred cc--ceEEEe--eCcc----cccccccCCCCccCCCCceecCCCCCChHHHHHHHHHhC--------HHHHHHHHHHHHH
Q 048438 78 LD--CCCLWA--TNPE----YLKNKATESKPVVDYKDWQITLSRSFRSLKLWFVIRNYG--------MENLRHFLRSHVN 141 (239)
Q Consensus 78 ~g--~g~l~~--~~~~----~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g--------~~g~~~~~~~~~~ 141 (239)
.| +|++++ .+++ ........ .....+. ...+....+...+. .+.+++..++..+
T Consensus 251 ~G~riG~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~-~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~ 320 (396)
T 2q7w_A 251 YNERVGACTLVAADSETVDRAFSQMKAA---------IRANYSN-PPAHGASVVATILSNDALRAIWEQELTDMRQRIQR 320 (396)
T ss_dssp GGGCCEEEEEECSSHHHHHHHHHHHHHH---------HHTTTSS-CCHHHHHHHHHHHTSHHHHHHHHHHHHHC-CHHHH
T ss_pred cccccceEEEEcCCHHHHHHHHHHHHHH---------HhhccCC-CCcHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHH
Confidence 45 688876 2332 22111100 0000000 11222233233222 1355666677788
Q ss_pred HHHHHHHHHhCCC---CeEEEcCCCeeEE
Q 048438 142 MARLFERLVSGDK---RFEVVFPCHFAVV 167 (239)
Q Consensus 142 la~~l~~~l~~~~---g~~~~~~~~~~iv 167 (239)
+.+++.+.|++.. ++++. ++..++.
T Consensus 321 ~~~~l~~~L~~~~~~~~~~~~-~~~~~~~ 348 (396)
T 2q7w_A 321 MRQLFVNTLQEKGANRDFSFI-IKQNGMF 348 (396)
T ss_dssp HHHHHHHHHHHTTCCSCCTHH-HHCCSSE
T ss_pred HHHHHHHHHHhcCCCCCccee-cCCCceE
Confidence 8899999998863 25544 2344443
No 226
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=98.49 E-value=2e-07 Score=80.22 Aligned_cols=157 Identities=11% Similarity=0.070 Sum_probs=84.5
Q ss_pred ccEEEEEecCCCCcccccCh---hHHHHHHHHhCCEEEEecccccccccCc--cccc--ccCCCCCcceEEEcCcccCCC
Q 048438 4 IPLFLCATIGTTAITAVDPL---KPLCDVAKQFGIWVHVDAAYAGSACIFP--EFRH--FIDGVEGADSFSLNAHKWFFA 76 (239)
Q Consensus 4 ~p~~vv~t~gtt~~G~i~pl---~~i~~i~~~~gi~lhvD~A~~~~~~~~~--~~~~--~~~~~~~~Ds~~~~~hK~l~~ 76 (239)
.+.+++.+..+|.||.+.+. ++|+++|++||+++++|.+|+.....-. .... ...+...-..++.+++|.++.
T Consensus 183 ~~~~i~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~ 262 (409)
T 4eu1_A 183 GSVILVHACAHNPTGVDPTHDDWRQVCDVIKRRNHIPFVDMAYQGFATGQLDYDAFVPRHLVDMVPNLIVAQSFSKNFGL 262 (409)
T ss_dssp TCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHTTSSCCEEEEECTTTSSC
T ss_pred CcEEEEECCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccCCcccchHHHHHHHhhCCcEEEEecCcccccC
Confidence 45667777889999998885 5599999999999999999876433210 0000 011111123567789999764
Q ss_pred c-ccceEE--EeeCcc----cccccccCCCCccCCCCceecCCCCCChHHHHHHHHHhC-----HHHHHHHHHHHHHHHH
Q 048438 77 T-LDCCCL--WATNPE----YLKNKATESKPVVDYKDWQITLSRSFRSLKLWFVIRNYG-----MENLRHFLRSHVNMAR 144 (239)
Q Consensus 77 P-~g~g~l--~~~~~~----~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g-----~~g~~~~~~~~~~la~ 144 (239)
| ..+|++ ++.+++ +....... ..........+.......+++... .+.+++..++..++.+
T Consensus 263 ~G~riG~~~~v~~~~~~~~~l~~~~~~~-------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (409)
T 4eu1_A 263 YGHRCGALHISTASAEEAKRLVSQLALL-------IRPMYNNPPLYGAWVVSSILKDPQLTALWKKELKQMSSRIAEVRK 335 (409)
T ss_dssp GGGCCEEEEEECSSHHHHHHHHHHHHHH-------HHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCceEEEEEeCCHHHHHHHHHHHHHH-------HhhhcCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4 235666 555444 22211100 000000000011111222232110 2345667777888899
Q ss_pred HHHHHHhCCCC----eEEEcCCCeeEEEE
Q 048438 145 LFERLVSGDKR----FEVVFPCHFAVVCF 169 (239)
Q Consensus 145 ~l~~~l~~~~g----~~~~~~~~~~iv~f 169 (239)
++.+.|++. | +++. +++.++..|
T Consensus 336 ~l~~~L~~~-g~~~~~~~~-~~~~~~~~~ 362 (409)
T 4eu1_A 336 RLVSELKAC-GSVHDWSHI-ERQVGMMAY 362 (409)
T ss_dssp HHHHHHHHT-TCCSCCHHH-HHSCSSEEE
T ss_pred HHHHHHHhc-CCCCCccee-cCCceEEEE
Confidence 999999886 3 4433 334455444
No 227
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=98.47 E-value=5.9e-07 Score=80.32 Aligned_cols=81 Identities=10% Similarity=-0.039 Sum_probs=56.7
Q ss_pred ccEEEEEecCCCCcccccChh---HHHHHHH-HhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCccc
Q 048438 4 IPLFLCATIGTTAITAVDPLK---PLCDVAK-QFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATLD 79 (239)
Q Consensus 4 ~p~~vv~t~gtt~~G~i~pl~---~i~~i~~-~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g 79 (239)
.+-+|+++..+|.+|.+.|.+ +|+++|+ +||+++++|.+|+......... .......+.++.+++|.++ +.|
T Consensus 244 ~~k~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~~li~De~y~~~~~~~~~~---~~~~~~~~i~~~S~SK~~g-~~G 319 (533)
T 3f6t_A 244 SIKALIVVNPTNPTSKEFDTNALNAIKQAVEKNPKLMIISDEVYGAFVPNFKSI---YSVVPYNTMLVYSYSKLFG-CTG 319 (533)
T ss_dssp TEEEEEEESSCTTTCBCCCHHHHHHHHHHHHHCTTCEEEEECTTGGGSTTCCCH---HHHSGGGEEEEEESHHHHT-CGG
T ss_pred CCeEEEEeCCCCCCccccCHHHHHHHHHHHHhCCCCEEEEcCCccccccCccCH---hhcCCCCEEEEecCcccCC-Ccc
Confidence 355677778889999998876 7888888 5899999999998543321111 1111136689999999976 445
Q ss_pred --ceEEEeeCc
Q 048438 80 --CCCLWATNP 88 (239)
Q Consensus 80 --~g~l~~~~~ 88 (239)
+|+++..+.
T Consensus 320 ~RiG~l~~~~~ 330 (533)
T 3f6t_A 320 WRLGVIALNEK 330 (533)
T ss_dssp GCEEEEEEESS
T ss_pred cceEEEEECcH
Confidence 788887654
No 228
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=98.31 E-value=1.2e-05 Score=70.54 Aligned_cols=200 Identities=14% Similarity=0.003 Sum_probs=105.8
Q ss_pred ccEEEEEecCCCCcccccC----hhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCccc
Q 048438 4 IPLFLCATIGTTAITAVDP----LKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATLD 79 (239)
Q Consensus 4 ~p~~vv~t~gtt~~G~i~p----l~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g 79 (239)
.+.+|++--...+.|.+.| +++|.++|++||+.+++|..|.+.--...-+.....++. .|.++++ |.+++-..
T Consensus 226 ~iAAvivEPiqg~gG~~~p~~~fl~~lr~lc~~~gillI~DEV~tG~GRtG~~~a~e~~gv~-PDivt~g--K~lggg~P 302 (456)
T 4atq_A 226 QVAAIIIEPIQGEGGFIVPAEGFLPALSEWAKEKGIVFIADEVQSGFCRTGEWFAVDHEGVV-PDIITMA--KGIAGGLP 302 (456)
T ss_dssp GEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTCC-CSEEEEC--GGGGTTSS
T ss_pred ceEEEEeccccCCCCccccchhhhHHHHHHHhhcCCceEecccccccCCccccccccccCCC-Cchhhhh--hcccCcCC
Confidence 3456666555566677766 899999999999999999998874222221221134554 9999886 77766566
Q ss_pred ceEEEeeCcccccccccCCCCccCCCCceecCCCCCChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCC----CC
Q 048438 80 CCCLWATNPEYLKNKATESKPVVDYKDWQITLSRSFRSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSGD----KR 155 (239)
Q Consensus 80 ~g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~----~g 155 (239)
.|.+..++ +......... ...++ .+.+.......++|+.+..+++ .++..++.+++.++|+++ +.
T Consensus 303 ~~av~~~~-~i~~~~~~~~------~~~Tf-~gnpla~aaala~L~~i~~~~l---~~~~~~~g~~l~~~L~~l~~~~~~ 371 (456)
T 4atq_A 303 LSAITGRA-DLLDAVHPGG------LGGTY-GGNPVACAAALAAIDTMEQHDL---NGRARHIEELALGKLRELAAELSA 371 (456)
T ss_dssp CEEEEEEH-HHHTTSCTTS------SCCSS-SSCHHHHHHHHHHHHHHHHTTH---HHHHHHHHHHHHHHHHHHHHHCC-
T ss_pred ceeeEecH-HHHhcccccC------CCCCC-CCChHHHHhhHHHHHHHhhccH---HHHHHHHHHHHHHHHHHHHHhccc
Confidence 77777754 3222221100 00111 1222222333344555544444 334446666666666542 11
Q ss_pred --eEEEcCCC--eeEEEEEEcCCCcchhhhhhhhcccccccHHHHHHHHHHHHHHHHhcCcEEEEEEEECCEeEEEEEec
Q 048438 156 --FEVVFPCH--FAVVCFRVSPLPVLMDKLKTKYENCLLSEEEQINEFNRELLESINASGKAYMTNVVLGGIYAIRFATG 231 (239)
Q Consensus 156 --~~~~~~~~--~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~ 231 (239)
-.++.+.+ --++.+.+..+... ..+ .++..++.+.+.++|.+.... . ....+||+++-
T Consensus 372 ~~~~~v~~VRG~Gl~~giel~~~~~~------------~~~----~~~~~~v~~~~~~~Gvl~~~~-g-~~~~~irl~Pp 433 (456)
T 4atq_A 372 GGGSVVGDIRGRGAMLAIELVQPGSK------------EPN----AELTKAVAAACLKEGVIILTC-G-TYGNVIRLLPP 433 (456)
T ss_dssp ----CEEEEEEETTEEEEEEBCTTSC------------CBC----HHHHHHHHHHHHHTTEECEEE-C-TTSCEEEECCC
T ss_pred ccCCceEEeeecceEEEEEEecCCCC------------CcC----HHHHHHHHHHHHHCCCEEEec-C-CCCCEEEEECC
Confidence 12222211 12555665432110 011 345567888888888765432 1 12357898854
Q ss_pred CCCC
Q 048438 232 ATLT 235 (239)
Q Consensus 232 ~~~t 235 (239)
--.|
T Consensus 434 L~it 437 (456)
T 4atq_A 434 LVIS 437 (456)
T ss_dssp TTCC
T ss_pred CCCC
Confidence 3333
No 229
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=97.50 E-value=1.9e-07 Score=82.09 Aligned_cols=159 Identities=9% Similarity=-0.055 Sum_probs=84.8
Q ss_pred ccEEEEEecCCCCcccccC----hhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCccc
Q 048438 4 IPLFLCATIGTTAITAVDP----LKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATLD 79 (239)
Q Consensus 4 ~p~~vv~t~gtt~~G~i~p----l~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g 79 (239)
.+.+|++....+++|.+.| +++|.++|++||+++++|.+|+ +. ....+.....++ ..|.+ ++.|++++...
T Consensus 233 ~~aavi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-~r-~g~~~a~~~~gv-~pDi~--t~sK~lg~G~p 307 (465)
T 2yky_A 233 DCAAILVEPMLGAGGCVPAERAFLDLLRAEASRCGALLIFDEVMT-SR-LSGGGAQEMLGI-SADLT--TLGKYIGGGMS 307 (465)
Confidence 3445555555556898877 9999999999999999999998 42 111000001232 26765 46799987555
Q ss_pred ceEEEeeCcccccccccCCCCccCCCCceecCCCCCChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCCC-CeEE
Q 048438 80 CCCLWATNPEYLKNKATESKPVVDYKDWQITLSRSFRSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSGDK-RFEV 158 (239)
Q Consensus 80 ~g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~-g~~~ 158 (239)
.|+++.++ +.+........... ....++ .+.+....+..++++.+..+ +..++..++.++++++|+++. ...+
T Consensus 308 iG~v~~~~-~i~~~l~~~~~g~~-~~~~T~-~~npla~aAa~aaL~~l~~~---~~~~~~~~~~~~l~~~L~~~~~~~~~ 381 (465)
T 2yky_A 308 FGAFGGRR-DLMERFDPARDGAF-AHAGTF-NNNILTMSAGHAALTQIYTR---QAASDLSASGDRFRANLNRIAVENQA 381 (465)
Confidence 77766543 34332221000000 000111 11122222333345544333 345566688888888887642 1222
Q ss_pred E--cCCCeeEEEEEEcC
Q 048438 159 V--FPCHFAVVCFRVSP 173 (239)
Q Consensus 159 ~--~~~~~~iv~f~~~~ 173 (239)
. .+...+++.|.+.+
T Consensus 382 ~~~v~g~G~~~~i~~~~ 398 (465)
T 2yky_A 382 PLQFTGLGSLGTIHFSR 398 (465)
Confidence 1 12345577776653
No 230
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=98.00 E-value=5.1e-05 Score=66.40 Aligned_cols=136 Identities=10% Similarity=0.035 Sum_probs=76.0
Q ss_pred cEEEEEecCCCCcccccC----hhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCcccc
Q 048438 5 PLFLCATIGTTAITAVDP----LKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATLDC 80 (239)
Q Consensus 5 p~~vv~t~gtt~~G~i~p----l~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~ 80 (239)
..+|++--...+.|.+.| +++|.++|++||++|++|.+|.+ -....+.....++. .|.++++ |.+++-...
T Consensus 221 iAavIvEPv~g~~G~~~p~~~fL~~lr~lc~~~g~lLI~DEV~tG--R~G~~~a~e~~gv~-PDi~t~g--K~lggG~Pi 295 (454)
T 4ao9_A 221 IAVVLVEPMQGASGCIPGQPDFLQALRESATQVGALLVFDEVMTS--RLAPHGLANKLGIR-SDLTTLG--KYIGGGMSF 295 (454)
T ss_dssp EEEEEECSEESTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTGG--GGSTTCHHHHHTCC-CSEEEEE--GGGGTTSSC
T ss_pred eEEEEeccccCCCCccCCchhhHHHHHHHHhhcCCEEEEECCCcC--CCccccchhccCCC-CcEEEec--cccCCCCcc
Confidence 445655555567788888 99999999999999999999874 11111111123554 8988765 766665567
Q ss_pred eEEEeeCcccccccccCCCCccCCCCceecCCCCCChHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhC
Q 048438 81 CCLWATNPEYLKNKATESKPVVDYKDWQITLSRSFRSLKLWFVIRNYGMENLRHFLRSHVNMARLFERLVSG 152 (239)
Q Consensus 81 g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~ 152 (239)
|.+..++ +............. ...++ .+.+....+..++|+.+..++ ..++..++.++|+++|++
T Consensus 296 ga~~~~~-ei~~~~~~~~~~~~--h~~T~-~gnPla~AAala~L~~l~~~~---~~~~~~~~g~~l~~~L~~ 360 (454)
T 4ao9_A 296 GAFGGRA-DVMALFDPRTGPLA--HSGTF-NNNVMTMAAGYAGLTKLFTPE---AAGALAERGEALRARLNA 360 (454)
T ss_dssp EEEEECH-HHHGGGCTTTCSCC--CCCTT-TTCHHHHHHHHHHHHHTSCHH---HHHHHHHHHHHHHHHHHH
T ss_pred eeeeeHH-HHHHHHhhccCCcc--ccCCC-CCCHHHHHHHHHHHHHHhccC---hhHHHHHHHHHHHHHHHH
Confidence 7777654 33332211100000 00111 111222233334566654443 344455777777777765
No 231
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=97.86 E-value=1.5e-05 Score=70.13 Aligned_cols=80 Identities=13% Similarity=0.032 Sum_probs=53.5
Q ss_pred cEEEEEecCCCCcccccC----hhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCc-cc
Q 048438 5 PLFLCATIGTTAITAVDP----LKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFAT-LD 79 (239)
Q Consensus 5 p~~vv~t~gtt~~G~i~p----l~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P-~g 79 (239)
..+|++--....-|.+.| +++|.++|++||+.|++|..+.+.--...-+.....++. .|.++++ |.+++- ..
T Consensus 237 iAavi~EPiqg~gG~~~p~~~fl~~lr~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv~-PDi~t~~--K~l~gG~~P 313 (473)
T 4e3q_A 237 IAGFFAEPVMGAGGVIPPAKGYFQAILPILRKYDIPVISDEVICGFGRTGNTWGCVTYDFT-PDAIISS--KNLTAGFFP 313 (473)
T ss_dssp EEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCCEEEECTTTSSSTTSSSCHHHHTTCC-CSEEEEC--GGGGTTSSC
T ss_pred eEEEEeCCccCCCCceeCCHHHHHHHHHHhcccceEEeccCccccCCcccchhHHHhcCCC-CChHHhc--ccccCCCCC
Confidence 455666555566677666 899999999999999999998875322221111133554 8998765 877543 45
Q ss_pred ceEEEeeC
Q 048438 80 CCCLWATN 87 (239)
Q Consensus 80 ~g~l~~~~ 87 (239)
.|.+++++
T Consensus 314 l~av~~~~ 321 (473)
T 4e3q_A 314 MGAVILGP 321 (473)
T ss_dssp CEEEEECH
T ss_pred cccccccH
Confidence 67777754
No 232
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=97.66 E-value=4.3e-05 Score=71.70 Aligned_cols=80 Identities=16% Similarity=-0.032 Sum_probs=49.7
Q ss_pred cEEEEEecC-CCCcccccC----hhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCc-c
Q 048438 5 PLFLCATIG-TTAITAVDP----LKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFAT-L 78 (239)
Q Consensus 5 p~~vv~t~g-tt~~G~i~p----l~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P-~ 78 (239)
+.+|++--. ....|.+.| +++|.++|++||+++++|.+|.+.-.....+.....++. .|.++ +.|.|++- .
T Consensus 595 iaavi~Epvvqg~gG~~~~~~~~L~~l~~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv~-PDiit--lsK~L~gG~~ 671 (831)
T 4a0g_A 595 VGALIIEPVIHGAGGMHMVDPLFQRVLVNECRNRKIPVIFDEVFTGFWRLGVETTTELLGCK-PDIAC--FAKLLTGGMV 671 (831)
T ss_dssp EEEEEECCSEETTTTSEEECHHHHHHHHHHHHHTTCCEEEECTTTTTTTTSBSSTHHHHSSC-CSEEE--ECGGGGTTSS
T ss_pred EEEEEEecccccCCCCccCCHHHHHHHHHHHHHcCCeEEEEcCccccccCCCchhhHhcCCC-CcEEE--EecccccCcc
Confidence 344544443 455677665 899999999999999999987753221111111123443 78775 56988652 2
Q ss_pred cceEEEeeC
Q 048438 79 DCCCLWATN 87 (239)
Q Consensus 79 g~g~l~~~~ 87 (239)
..|+++.++
T Consensus 672 Plgav~~~~ 680 (831)
T 4a0g_A 672 PLAVTLATD 680 (831)
T ss_dssp CCEEEEECH
T ss_pred CcEEEEECH
Confidence 357777654
No 233
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=97.55 E-value=0.00015 Score=62.79 Aligned_cols=132 Identities=11% Similarity=-0.031 Sum_probs=73.2
Q ss_pred cEEEEEecCCCCcccccChhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCccc--ceE
Q 048438 5 PLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFATLD--CCC 82 (239)
Q Consensus 5 p~~vv~t~gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g--~g~ 82 (239)
+-+|+++..+|.+|.+.+ + + ++ ++..+.|.++......+- . +. ...|+++.+++|.++ +.| +|+
T Consensus 197 ~k~v~l~~p~NPtG~~~~-~-~---l~--~~~~i~d~~~~~~~~s~~---~-~~--~~~~i~~~S~SK~~g-~~G~RiG~ 262 (427)
T 2hox_A 197 QYIEMVTSPNNPEGLLRH-A-V---IK--GCKSIYDMVYYWPHYTPI---K-YK--ADEDILLFTMSKFTG-HSGSRFGW 262 (427)
T ss_dssp GEEEEEESSCTTTCCCCC-C-S---ST--TCEEEEECTTCSTTTSCC---C-SC--BCCSEEEEEHHHHTS-CGGGCCEE
T ss_pred ceEEEEcCCCCCcccccH-H-H---Hc--CCCEEEeecccCCCCCcc---c-cC--CCceEEEEeChhcCC-CCCceEEE
Confidence 556777888999999988 4 2 33 678888887642111110 0 11 237899999999875 445 788
Q ss_pred EEeeCcccccccccCCCCccCCCCceecCCCC-CChHHHHHHHHHh---------C-HHHHHHHHHHHHHHHHHHHHHHh
Q 048438 83 LWATNPEYLKNKATESKPVVDYKDWQITLSRS-FRSLKLWFVIRNY---------G-MENLRHFLRSHVNMARLFERLVS 151 (239)
Q Consensus 83 l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~---------g-~~g~~~~~~~~~~la~~l~~~l~ 151 (239)
+++.+++.+...... .... ..+.. +....+..+++.. + .+-+++..++..+..+++.+.|+
T Consensus 263 ~~~~~~~l~~~l~~~-------~~~~-~~~~~~~~q~a~~~~L~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 334 (427)
T 2hox_A 263 ALIKDESVYNNLLNY-------MTKN-TEGTPRETQLRSLKVLKEVVAMVKTQKGTMRDLNTFGFKKLRERWVNITALLD 334 (427)
T ss_dssp EEECCHHHHHHHHHH-------HHHH-TSSCCHHHHHHHHHHHHHHHHHHHHHTTSTTSHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEECCHHHHHHHHHH-------HHhc-CCCCCHHHHHHHHHHhhcchhhhccccchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 887544443322110 0000 00101 1111122223221 0 11233455666778889999999
Q ss_pred CCCCeEE
Q 048438 152 GDKRFEV 158 (239)
Q Consensus 152 ~~~g~~~ 158 (239)
+.+|+++
T Consensus 335 ~~~g~~~ 341 (427)
T 2hox_A 335 QSDRFSY 341 (427)
T ss_dssp TSSSEEC
T ss_pred hCcCccc
Confidence 8888876
No 234
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=97.14 E-value=0.001 Score=59.52 Aligned_cols=81 Identities=12% Similarity=0.065 Sum_probs=55.4
Q ss_pred cEEEEEecCCCCcccccC---hhHHHHHH--HHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCcccCCCc-c
Q 048438 5 PLFLCATIGTTAITAVDP---LKPLCDVA--KQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAHKWFFAT-L 78 (239)
Q Consensus 5 p~~vv~t~gtt~~G~i~p---l~~i~~i~--~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P-~ 78 (239)
+-+|+++..+|.||.+.+ +++|.++| +++|+++++|.+|+....... .........++++.|++|.++.| .
T Consensus 246 ~k~v~l~~p~NPtG~~~~~~~l~~l~~~a~~~~~~~~ii~De~y~~~~~~~~---s~~~~~~~~~i~~~S~SK~~g~~Gl 322 (546)
T 2zy4_A 246 IKIFFCVNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVYGTFADDFQ---SLFAICPENTLLVYSFSKYFGATGW 322 (546)
T ss_dssp EEEEEEESSCSSSCBCCCHHHHHHHHHHHHHTCTTCEEEEECTTGGGSTTCC---CHHHHCGGGEEEEEESTTTTTCGGG
T ss_pred CeEEEEECCCCCCCccCCHHHHHHHHHHHHhccCCcEEEEeCcchhhcccCc---CHHHhCCCCEEEEEeCccccCCCCc
Confidence 456667788899999887 56678888 789999999999986542111 11110112678899999997644 2
Q ss_pred cceEEEeeCc
Q 048438 79 DCCCLWATNP 88 (239)
Q Consensus 79 g~g~l~~~~~ 88 (239)
-+|+++..+.
T Consensus 323 RiG~~~~~~~ 332 (546)
T 2zy4_A 323 RLGVVAAHQQ 332 (546)
T ss_dssp CEEEEEEESS
T ss_pred ceEEEEECCH
Confidence 2688887553
No 235
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=91.59 E-value=0.19 Score=42.97 Aligned_cols=78 Identities=15% Similarity=0.057 Sum_probs=48.2
Q ss_pred EEEEec-CCCCcccccC---hhHHHHHHHHhCCEEEEeccccccccc-Ccc----cccccCCCCCcceEEEcCcccCCCc
Q 048438 7 FLCATI-GTTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSACI-FPE----FRHFIDGVEGADSFSLNAHKWFFAT 77 (239)
Q Consensus 7 ~vv~t~-gtt~~G~i~p---l~~i~~i~~~~gi~lhvD~A~~~~~~~-~~~----~~~~~~~~~~~Ds~~~~~hK~l~~P 77 (239)
+|+++. .+|.||.+.+ +++|+++|++|+++++.|.+|...... .+. .+.+... ..-=.++.++.|.++.|
T Consensus 176 ~i~l~~~~~NPTG~~~s~~~~~~l~~~~~~~~~~vi~De~Y~~l~~~~~~~~~~~~~~~~~~-~~~~i~~~S~SK~~~l~ 254 (405)
T 3k7y_A 176 SVILQISCYNPCSVNIEEKYFDEIIEIVLHKKHVIIFDIAYQGFGHTNLEEDVLLIRKFEEK-NIAFSVCQSFSKNMSLY 254 (405)
T ss_dssp EEEECCSSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEEESCTTTSSSSTTGGGHHHHHHHTT-TCCEEEEEECTTTSCCT
T ss_pred EEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCeEEEEecCcccccCCCcccchHHHHHHHhc-CCcEEEEeeCCccCCCc
Confidence 455544 4799999766 566888899999999999998643221 000 0111111 11125567999998633
Q ss_pred -ccceEEEe
Q 048438 78 -LDCCCLWA 85 (239)
Q Consensus 78 -~g~g~l~~ 85 (239)
.-+|.+++
T Consensus 255 GlRiG~~~~ 263 (405)
T 3k7y_A 255 GERAGALHI 263 (405)
T ss_dssp TTTEEEEEE
T ss_pred cccceEEEE
Confidence 44677653
No 236
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=90.53 E-value=0.4 Score=41.23 Aligned_cols=81 Identities=14% Similarity=0.023 Sum_probs=51.5
Q ss_pred cEEEEEecCCCCcccccC---hhHHHHHHHHhCCEEEEecccccccccC---ccc--ccccCCCCCcceEEEcCcccCCC
Q 048438 5 PLFLCATIGTTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSACIF---PEF--RHFIDGVEGADSFSLNAHKWFFA 76 (239)
Q Consensus 5 p~~vv~t~gtt~~G~i~p---l~~i~~i~~~~gi~lhvD~A~~~~~~~~---~~~--~~~~~~~~~~Ds~~~~~hK~l~~ 76 (239)
..+++.+...|.||...+ +++|+++|++++++++.|.++......- +.+ +...+. ..-=.++.++.|.++.
T Consensus 191 ~~vll~~~p~NPtG~~~~~~~~~~i~~~~~~~~~~~~~D~~Y~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~SK~~~~ 269 (420)
T 4h51_A 191 SVFILHQCAHNPTGVDPSQEQWNEIASLMLAKHHQVFFDSAYQGYASGSLDTDAYAARLFARR-GIEVLLAQSFSKNMGL 269 (420)
T ss_dssp CEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHT-TCCCEEEEECTTTSCC
T ss_pred cEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceEeeehhhhhhccCCcccchHHHHhHHhh-CceEEEEecccccccc
Confidence 456667777899999655 6788999999999999999986543211 000 000111 1122456799998665
Q ss_pred cc-cceEEEee
Q 048438 77 TL-DCCCLWAT 86 (239)
Q Consensus 77 P~-g~g~l~~~ 86 (239)
+. -+|.+.+.
T Consensus 270 ~G~RvG~~~~~ 280 (420)
T 4h51_A 270 YSERAGTLSLL 280 (420)
T ss_dssp GGGCEEEEEEE
T ss_pred ccCceEEEEec
Confidence 42 26777663
No 237
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=76.56 E-value=1.3 Score=38.16 Aligned_cols=29 Identities=21% Similarity=0.310 Sum_probs=27.1
Q ss_pred CCCcccccChhHHHHHHHHhCCEEEEecc
Q 048438 14 TTAITAVDPLKPLCDVAKQFGIWVHVDAA 42 (239)
Q Consensus 14 tt~~G~i~pl~~i~~i~~~~gi~lhvD~A 42 (239)
++..|+.++++++++-||++||.+++|..
T Consensus 70 ~~~~Gt~~df~~lv~~aH~~Gi~VilD~V 98 (496)
T 4gqr_A 70 CTRSGNEDEFRNMVTRCNNVGVRIYVDAV 98 (496)
T ss_dssp CBTTBCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 56789999999999999999999999996
No 238
>1k4i_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesi antimicrobial target, structure-based design, isomerase; 0.98A {Magnaporthe grisea} SCOP: d.115.1.2 PDB: 1k49_A 1k4l_A 1k4o_A 1k4p_A
Probab=72.74 E-value=4.1 Score=31.82 Aligned_cols=38 Identities=18% Similarity=0.205 Sum_probs=32.0
Q ss_pred CCCccEEEEEecCCCC----------cccccChhHHHHHHHHhCCEEE
Q 048438 1 AGLIPLFLCATIGTTA----------ITAVDPLKPLCDVAKQFGIWVH 38 (239)
Q Consensus 1 ~g~~p~~vv~t~gtt~----------~G~i~pl~~i~~i~~~~gi~lh 38 (239)
+|+.|..|++-..+-. .|......++.++|++||+.++
T Consensus 164 AGl~PagVicEi~~~~~~~~~~~~~~dG~mar~~~l~~fA~~h~L~ii 211 (233)
T 1k4i_A 164 AGKRPVAVISEIVDDGQEVEGRAVRAAPGMLRGDECVAFARRWGLKVC 211 (233)
T ss_dssp TTCCSBEEEEEBEECCEECTTSSCEESCEECCHHHHHHHHHHTTCEEE
T ss_pred cCCCceEEEEEeCCCcccccccccCCCCCcCCHHHHHHHHHHcCCcEE
Confidence 6899999988766431 6999999999999999999873
No 239
>3rag_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tructural genomics; 1.80A {Alicyclobacillus acidocaldarius subsp}
Probab=71.36 E-value=5.3 Score=31.47 Aligned_cols=39 Identities=31% Similarity=0.352 Sum_probs=30.8
Q ss_pred CCccEEEEEecCCCCcccccChhHHHHHHHHhCCEEEEecc
Q 048438 2 GLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAA 42 (239)
Q Consensus 2 g~~p~~vv~t~gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A 42 (239)
+..-.+|++|-|.+..|. +|+ +.+++++++|+.+|+=|.
T Consensus 8 ~~~k~iillTDG~~~~g~-~p~-~aa~~a~~~gi~v~tIGi 46 (242)
T 3rag_A 8 ATIRQILVITDGCSNIGP-DPV-EAARRAHRHGIVVNVIGI 46 (242)
T ss_dssp CCEEEEEEEESSCCCSSS-CHH-HHHHHHHHTTCEEEEEEE
T ss_pred CCccEEEEEccCCCCCCC-CHH-HHHHHHHHCCCEEEEEEe
Confidence 345678999999988886 776 567899999999877664
No 240
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A*
Probab=70.08 E-value=2.3 Score=36.60 Aligned_cols=30 Identities=10% Similarity=0.017 Sum_probs=27.1
Q ss_pred CCCCcccccChhHHHHHHHHhCCEEEEecc
Q 048438 13 GTTAITAVDPLKPLCDVAKQFGIWVHVDAA 42 (239)
Q Consensus 13 gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A 42 (239)
..+..|+.++++++++-||++||.+++|.+
T Consensus 57 idp~~Gt~~dfk~Lv~~aH~~Gi~VilD~V 86 (448)
T 1g94_A 57 LQSRGGNRAQFIDMVNRCSAAGVDIYVDTL 86 (448)
T ss_dssp SCBTTBCHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred cCCCCCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 346789999999999999999999999986
No 241
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A
Probab=69.73 E-value=2.7 Score=36.50 Aligned_cols=30 Identities=13% Similarity=-0.027 Sum_probs=27.4
Q ss_pred CCCCcccccChhHHHHHHHHhCCEEEEecc
Q 048438 13 GTTAITAVDPLKPLCDVAKQFGIWVHVDAA 42 (239)
Q Consensus 13 gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A 42 (239)
..+..|+.++++++++-||++||.+++|.+
T Consensus 71 id~~~Gt~~df~~lv~~aH~~Gi~VilD~V 100 (483)
T 3bh4_A 71 VRTKYGTKSELQDAIGSLHSRNVQVYGDVV 100 (483)
T ss_dssp SSCSSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCCCCCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 456789999999999999999999999996
No 242
>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A*
Probab=68.74 E-value=3 Score=35.75 Aligned_cols=30 Identities=27% Similarity=0.295 Sum_probs=27.0
Q ss_pred CCCCcccccChhHHHHHHHHhCCEEEEecc
Q 048438 13 GTTAITAVDPLKPLCDVAKQFGIWVHVDAA 42 (239)
Q Consensus 13 gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A 42 (239)
..+..|+.++++++++-||++|+.+++|..
T Consensus 79 id~~~Gt~~df~~lv~~~H~~Gi~VilD~V 108 (435)
T 1mxg_A 79 VETRFGSKEELVRLIQTAHAYGIKVIADVV 108 (435)
T ss_dssp SSCSSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 346689999999999999999999999996
No 243
>1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1
Probab=68.70 E-value=2.7 Score=36.91 Aligned_cols=30 Identities=17% Similarity=0.055 Sum_probs=27.2
Q ss_pred CCCCcccccChhHHHHHHHHhCCEEEEecc
Q 048438 13 GTTAITAVDPLKPLCDVAKQFGIWVHVDAA 42 (239)
Q Consensus 13 gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A 42 (239)
..+..|+.++++++++-||++||.+++|..
T Consensus 74 idp~~Gt~~dfk~Lv~~aH~~Gi~VilD~V 103 (515)
T 1hvx_A 74 VRTKYGTKAQYLQAIQAAHAAGMQVYADVV 103 (515)
T ss_dssp SSCSSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCCCCCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 346689999999999999999999999996
No 244
>1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A
Probab=68.67 E-value=3 Score=36.18 Aligned_cols=30 Identities=20% Similarity=-0.012 Sum_probs=27.1
Q ss_pred CCCCcccccChhHHHHHHHHhCCEEEEecc
Q 048438 13 GTTAITAVDPLKPLCDVAKQFGIWVHVDAA 42 (239)
Q Consensus 13 gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A 42 (239)
..+..|+.++++++++-||++||.+++|.+
T Consensus 73 idp~~Gt~~df~~lv~~aH~~Gi~VilD~V 102 (480)
T 1ud2_A 73 VRTKYGTKAQLERAIGSLKSNDINVYGDVV 102 (480)
T ss_dssp SSCSSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCCCCCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 346689999999999999999999999996
No 245
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A*
Probab=68.46 E-value=3.1 Score=36.19 Aligned_cols=30 Identities=23% Similarity=0.109 Sum_probs=27.3
Q ss_pred CCCCcccccChhHHHHHHHHhCCEEEEecc
Q 048438 13 GTTAITAVDPLKPLCDVAKQFGIWVHVDAA 42 (239)
Q Consensus 13 gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A 42 (239)
..+..|+.++++++++-||++||.+++|.+
T Consensus 75 idp~~Gt~~df~~Lv~~aH~~Gi~VilD~V 104 (485)
T 1wpc_A 75 VRTKYGTRSQLQAAVTSLKNNGIQVYGDVV 104 (485)
T ss_dssp SSCSSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCCCCCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 456789999999999999999999999996
No 246
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=68.05 E-value=2.8 Score=35.90 Aligned_cols=30 Identities=17% Similarity=0.133 Sum_probs=27.2
Q ss_pred CCCCcccccChhHHHHHHHHhCCEEEEecc
Q 048438 13 GTTAITAVDPLKPLCDVAKQFGIWVHVDAA 42 (239)
Q Consensus 13 gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A 42 (239)
.....|+.++++++++-||++|+.+++|..
T Consensus 62 idp~~Gt~~df~~lv~~aH~~Gi~VilD~V 91 (441)
T 1lwj_A 62 FKAEYGSEREFKEMIEAFHDSGIKVVLDLP 91 (441)
T ss_dssp ECTTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCcccCCHHHHHHHHHHHHHCCCEEEEEeC
Confidence 356689999999999999999999999996
No 247
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A
Probab=67.71 E-value=2.9 Score=36.23 Aligned_cols=31 Identities=23% Similarity=0.312 Sum_probs=27.6
Q ss_pred cCCCCcccccChhHHHHHHHHhCCEEEEecc
Q 048438 12 IGTTAITAVDPLKPLCDVAKQFGIWVHVDAA 42 (239)
Q Consensus 12 ~gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A 42 (239)
...+..|+.++++++++-||++||.+++|.+
T Consensus 89 ~idp~~Gt~~df~~lv~~~H~~Gi~VilD~V 119 (478)
T 2guy_A 89 SLNENYGTADDLKALSSALHERGMYLMVDVV 119 (478)
T ss_dssp EECTTSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred ccCccCCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 3456789999999999999999999999986
No 248
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=65.74 E-value=3.4 Score=36.43 Aligned_cols=28 Identities=14% Similarity=0.080 Sum_probs=26.2
Q ss_pred CCcccccChhHHHHHHHHhCCEEEEecc
Q 048438 15 TAITAVDPLKPLCDVAKQFGIWVHVDAA 42 (239)
Q Consensus 15 t~~G~i~pl~~i~~i~~~~gi~lhvD~A 42 (239)
...|+.++++++++-||++||.+++|..
T Consensus 87 p~~Gt~~dfk~Lv~~aH~~GI~VilD~V 114 (527)
T 1gcy_A 87 GRYGSDAQLRQAASALGGAGVKVLYDVV 114 (527)
T ss_dssp SSSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 6789999999999999999999999985
No 249
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum}
Probab=65.20 E-value=3 Score=35.83 Aligned_cols=29 Identities=24% Similarity=0.370 Sum_probs=26.1
Q ss_pred CCCcccccChhHHHHHHHHhCCEEEEecc
Q 048438 14 TTAITAVDPLKPLCDVAKQFGIWVHVDAA 42 (239)
Q Consensus 14 tt~~G~i~pl~~i~~i~~~~gi~lhvD~A 42 (239)
.+..|..++++++++-||++|+.+++|..
T Consensus 77 ~~~~Gt~~~~~~lv~~~h~~Gi~vi~D~V 105 (449)
T 3dhu_A 77 NPEYGTLADFKALTDRAHELGMKVMLDIV 105 (449)
T ss_dssp CGGGCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CcccCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 45578889999999999999999999986
No 250
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A*
Probab=64.46 E-value=3.6 Score=34.90 Aligned_cols=28 Identities=18% Similarity=0.158 Sum_probs=26.0
Q ss_pred CCcccccChhHHHHHHHHhCCEEEEecc
Q 048438 15 TAITAVDPLKPLCDVAKQFGIWVHVDAA 42 (239)
Q Consensus 15 t~~G~i~pl~~i~~i~~~~gi~lhvD~A 42 (239)
+..|+.++++++++-||++|+.+++|..
T Consensus 63 ~~~Gt~~d~~~lv~~~h~~Gi~VilD~V 90 (405)
T 1ht6_A 63 SKYGNAAELKSLIGALHGKGVQAIADIV 90 (405)
T ss_dssp CTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred ccCCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 5678899999999999999999999996
No 251
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm}
Probab=63.93 E-value=4 Score=35.74 Aligned_cols=30 Identities=17% Similarity=0.134 Sum_probs=26.9
Q ss_pred CCCCcccccChhHHHHHHHHhCCEEEEecc
Q 048438 13 GTTAITAVDPLKPLCDVAKQFGIWVHVDAA 42 (239)
Q Consensus 13 gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A 42 (239)
.....|+.++++++++-||++||.+++|.+
T Consensus 72 vdp~~Gt~~dfk~Lv~~aH~~Gi~VilD~V 101 (549)
T 4aie_A 72 IDPQYGTMADMDELISKAKEHHIKIVMDLV 101 (549)
T ss_dssp ECTTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCcccCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 345678999999999999999999999996
No 252
>1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1
Probab=61.87 E-value=3.8 Score=35.58 Aligned_cols=29 Identities=24% Similarity=0.339 Sum_probs=26.5
Q ss_pred CCCcccccChhHHHHHHHHhCCEEEEecc
Q 048438 14 TTAITAVDPLKPLCDVAKQFGIWVHVDAA 42 (239)
Q Consensus 14 tt~~G~i~pl~~i~~i~~~~gi~lhvD~A 42 (239)
....|+.++++++++-||++||.+++|..
T Consensus 75 dp~~Gt~~d~~~Lv~~aH~~Gi~VilD~V 103 (488)
T 1wza_A 75 NPDYGTLEDFHKLVEAAHQRGIKVIIDLP 103 (488)
T ss_dssp CGGGCCHHHHHHHHHHHHHTTCEEEEECC
T ss_pred CcccCCHHHHHHHHHHHHHCCCEEEEEec
Confidence 45678999999999999999999999996
No 253
>1jae_A Alpha-amylase; glycosidase, carbohydrate metabolism, 4-glucan-4-glucanohydrolase, hydrolase; 1.65A {Tenebrio molitor} SCOP: b.71.1.1 c.1.8.1 PDB: 1clv_A 1tmq_A 1viw_A*
Probab=61.24 E-value=3.4 Score=35.78 Aligned_cols=29 Identities=17% Similarity=0.220 Sum_probs=26.0
Q ss_pred CCCcccccChhHHHHHHHHhCCEEEEecc
Q 048438 14 TTAITAVDPLKPLCDVAKQFGIWVHVDAA 42 (239)
Q Consensus 14 tt~~G~i~pl~~i~~i~~~~gi~lhvD~A 42 (239)
.+..|+.++++++++-||++|+.+++|..
T Consensus 68 dp~~Gt~~d~~~lv~~~h~~Gi~VilD~V 96 (471)
T 1jae_A 68 NTRSGDESAFTDMTRRCNDAGVRIYVDAV 96 (471)
T ss_dssp EETTEEHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCCCCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 34578899999999999999999999985
No 254
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A
Probab=61.02 E-value=4.2 Score=34.76 Aligned_cols=30 Identities=20% Similarity=0.175 Sum_probs=27.1
Q ss_pred CCCCcccccChhHHHHHHHHhCCEEEEecc
Q 048438 13 GTTAITAVDPLKPLCDVAKQFGIWVHVDAA 42 (239)
Q Consensus 13 gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A 42 (239)
.....|+.++++++++-||++|+.+++|..
T Consensus 74 idp~~Gt~~d~~~lv~~ah~~Gi~vilD~V 103 (424)
T 2dh2_A 74 IDPNFGSKEDFDSLLQSAKKKSIRVILDLT 103 (424)
T ss_dssp ECGGGCCHHHHHHHHHHHHHTTCEEEEECC
T ss_pred cCccCCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 356679999999999999999999999996
No 255
>2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1
Probab=60.41 E-value=4 Score=35.45 Aligned_cols=31 Identities=26% Similarity=0.362 Sum_probs=27.5
Q ss_pred cCCCCcccccChhHHHHHHHHhCCEEEEecc
Q 048438 12 IGTTAITAVDPLKPLCDVAKQFGIWVHVDAA 42 (239)
Q Consensus 12 ~gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A 42 (239)
...+..|+.++++++++-||++||.+++|.+
T Consensus 89 ~id~~~Gt~~df~~lv~~~H~~Gi~VilD~V 119 (484)
T 2aaa_A 89 DVNSNFGTADNLKSLSDALHARGMYLMVDVV 119 (484)
T ss_dssp EECTTTCCHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred ccCcccCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 3456788899999999999999999999996
No 256
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus}
Probab=60.31 E-value=4.2 Score=35.15 Aligned_cols=31 Identities=23% Similarity=0.328 Sum_probs=27.4
Q ss_pred cCCCCcccccChhHHHHHHHHhCCEEEEecc
Q 048438 12 IGTTAITAVDPLKPLCDVAKQFGIWVHVDAA 42 (239)
Q Consensus 12 ~gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A 42 (239)
......|+.++++++++-||++|+.+++|..
T Consensus 88 ~idp~~Gt~~df~~lv~~~h~~Gi~VilD~V 118 (475)
T 2z1k_A 88 QVDPILGGNEALRHLLEVAHAHGVRVILDGV 118 (475)
T ss_dssp EECGGGTCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred ccCcccCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 3456678999999999999999999999985
No 257
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A*
Probab=59.11 E-value=5.2 Score=35.76 Aligned_cols=30 Identities=30% Similarity=0.326 Sum_probs=27.1
Q ss_pred CCCCcccccChhHHHHHHHHhCCEEEEecc
Q 048438 13 GTTAITAVDPLKPLCDVAKQFGIWVHVDAA 42 (239)
Q Consensus 13 gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A 42 (239)
.....|+.++++++++-||++||.+++|..
T Consensus 215 idp~~Gt~~df~~lv~~~H~~Gi~VilD~V 244 (588)
T 1j0h_A 215 VDPHFGDKETLKTLIDRCHEKGIRVMLDAV 244 (588)
T ss_dssp ECTTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCccCCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 356688899999999999999999999996
No 258
>2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A
Probab=58.74 E-value=4.2 Score=35.32 Aligned_cols=30 Identities=27% Similarity=0.257 Sum_probs=26.9
Q ss_pred CCCCcccccChhHHHHHHHHhCCEEEEecc
Q 048438 13 GTTAITAVDPLKPLCDVAKQFGIWVHVDAA 42 (239)
Q Consensus 13 gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A 42 (239)
.....|+.++++++++-||++|+.+++|..
T Consensus 95 idp~~Gt~~df~~Lv~~aH~~Gi~VilD~V 124 (488)
T 2wc7_A 95 VDPMLGGNEAFKELLDAAHQRNIKVVLDGV 124 (488)
T ss_dssp ECGGGTHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCcccCCHHHHHHHHHHHHHCCCEEEEEeC
Confidence 356678999999999999999999999985
No 259
>3bc9_A AMYB, alpha amylase, catalytic region; acarbose, thermostable, halophilic, N domain, starch binding, hydrolase; HET: G6D GLC ACI BGC ACR; 1.35A {Halothermothrix orenii} PDB: 3bcd_A* 3bcf_A
Probab=58.64 E-value=5.6 Score=35.73 Aligned_cols=30 Identities=23% Similarity=0.093 Sum_probs=27.1
Q ss_pred CCCCcccccChhHHHHHHHHhCCEEEEecc
Q 048438 13 GTTAITAVDPLKPLCDVAKQFGIWVHVDAA 42 (239)
Q Consensus 13 gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A 42 (239)
..+..|+.++++++++-||++|+.+++|..
T Consensus 201 idp~~Gt~~dfk~Lv~~aH~~GI~VilD~V 230 (599)
T 3bc9_A 201 VRTKYGTKGELENAIDALHNNDIKVYFDAV 230 (599)
T ss_dssp SSBTTBCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCCCCCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 346689999999999999999999999996
No 260
>1m53_A Isomaltulose synthase; klebsiella SP. LX3, sucrose isomerization, isomerase; 2.20A {Klebsiella SP} SCOP: b.71.1.1 c.1.8.1
Probab=58.57 E-value=4.5 Score=35.98 Aligned_cols=30 Identities=10% Similarity=0.143 Sum_probs=26.9
Q ss_pred CCCCcccccChhHHHHHHHHhCCEEEEecc
Q 048438 13 GTTAITAVDPLKPLCDVAKQFGIWVHVDAA 42 (239)
Q Consensus 13 gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A 42 (239)
.....|+.++++++++-||++||.+++|..
T Consensus 85 idp~~Gt~~df~~lv~~aH~~Gi~VilD~V 114 (570)
T 1m53_A 85 IMKEYGTMEDFDSLVAEMKKRNMRLMIDVV 114 (570)
T ss_dssp ECGGGCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCcccCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 345678999999999999999999999985
No 261
>3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A
Probab=58.49 E-value=5.3 Score=35.83 Aligned_cols=29 Identities=14% Similarity=0.137 Sum_probs=26.3
Q ss_pred CCCcccccChhHHHHHHHHhCCEEEEecc
Q 048438 14 TTAITAVDPLKPLCDVAKQFGIWVHVDAA 42 (239)
Q Consensus 14 tt~~G~i~pl~~i~~i~~~~gi~lhvD~A 42 (239)
....|+.++++++++-||++||.+++|.+
T Consensus 192 dp~~Gt~~df~~Lv~~aH~~Gi~VilD~V 220 (601)
T 3edf_A 192 DPRYGSNEDFVRLSTEARKRGMGLIQDVV 220 (601)
T ss_dssp CTTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cccCCCHHHHHHHHHHHHHcCCEEEEEEC
Confidence 45678899999999999999999999996
No 262
>1zja_A Trehalulose synthase; sucrose isomerase, alpha-amylase family, (beta/alpha)8 barrel; 1.60A {Pseudomonas mesoacidophila} PDB: 1zjb_A 2pwd_A* 2pwh_A 2pwg_A 2pwe_A* 2pwf_A* 3gbe_A* 3gbd_A*
Probab=58.41 E-value=5.3 Score=35.39 Aligned_cols=30 Identities=17% Similarity=0.199 Sum_probs=27.0
Q ss_pred CCCCcccccChhHHHHHHHHhCCEEEEecc
Q 048438 13 GTTAITAVDPLKPLCDVAKQFGIWVHVDAA 42 (239)
Q Consensus 13 gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A 42 (239)
.....|+.++++++++-||++||.+++|..
T Consensus 72 idp~~Gt~~df~~Lv~~aH~~Gi~VilD~V 101 (557)
T 1zja_A 72 VMKEYGTMEDFDRLMAELKKRGMRLMVDVV 101 (557)
T ss_dssp ECTTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCcccCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 356679999999999999999999999985
No 263
>1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL ABD; 1.70A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1qhp_A*
Probab=58.38 E-value=5.2 Score=36.48 Aligned_cols=30 Identities=27% Similarity=0.161 Sum_probs=27.1
Q ss_pred CCCCcccccChhHHHHHHHHhCCEEEEecc
Q 048438 13 GTTAITAVDPLKPLCDVAKQFGIWVHVDAA 42 (239)
Q Consensus 13 gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A 42 (239)
.....|+.++++++++-||++||.+++|..
T Consensus 100 idp~~Gt~~df~~Lv~~aH~~GikVilD~V 129 (686)
T 1qho_A 100 IEEHFGNWTTFDTLVNDAHQNGIKVIVDFV 129 (686)
T ss_dssp ECTTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCcccCCHHHHHHHHHHHHHCCCEEEEEec
Confidence 356788999999999999999999999996
No 264
>1cyg_A Cyclodextrin glucanotransferase; glycosyltransferase; 2.50A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1
Probab=58.21 E-value=5.3 Score=36.40 Aligned_cols=30 Identities=27% Similarity=0.289 Sum_probs=27.1
Q ss_pred CCCCcccccChhHHHHHHHHhCCEEEEecc
Q 048438 13 GTTAITAVDPLKPLCDVAKQFGIWVHVDAA 42 (239)
Q Consensus 13 gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A 42 (239)
.....|+.+++++|++-||++||.+++|..
T Consensus 104 idp~~Gt~~df~~Lv~~aH~~GIkVilD~V 133 (680)
T 1cyg_A 104 PNPFFGTLSDFQRLVDAAHAKGIKVIIDFA 133 (680)
T ss_dssp ECTTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCcccCCHHHHHHHHHHHHHCCCEEEEEeC
Confidence 346689999999999999999999999986
No 265
>1d3c_A Cyclodextrin glycosyltransferase; alpha-amylase, product complex, oligosaccharide, family 13 glycosyl hydrolase, transglycosylation; HET: GLC; 1.78A {Bacillus circulans} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1cxf_A* 1cxk_A* 1cdg_A* 1cxe_A* 1cxh_A* 1cxi_A* 2cxg_A* 1cgv_A* 2dij_A* 1cgy_A* 1kck_A* 1cgx_A* 1cxl_A* 1cgw_A* 1tcm_A 1kcl_A* 1eo5_A* 1eo7_A* 1dtu_A* 1ot1_A* ...
Probab=57.77 E-value=5.4 Score=36.37 Aligned_cols=30 Identities=23% Similarity=0.197 Sum_probs=27.1
Q ss_pred CCCCcccccChhHHHHHHHHhCCEEEEecc
Q 048438 13 GTTAITAVDPLKPLCDVAKQFGIWVHVDAA 42 (239)
Q Consensus 13 gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A 42 (239)
.....|+.++++++++-||++||.+++|..
T Consensus 108 idp~~Gt~~dfk~Lv~~aH~~GI~VilD~V 137 (686)
T 1d3c_A 108 TNPAYGTIADFQNLIAAAHAKNIKVIIDFA 137 (686)
T ss_dssp ECTTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCcccCCHHHHHHHHHHHHHCCCEEEEEeC
Confidence 356789999999999999999999999985
No 266
>1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A
Probab=56.92 E-value=3.9 Score=34.82 Aligned_cols=29 Identities=31% Similarity=0.541 Sum_probs=26.2
Q ss_pred CCCcccccChhHHHHHHHHhCCEEEEecc
Q 048438 14 TTAITAVDPLKPLCDVAKQFGIWVHVDAA 42 (239)
Q Consensus 14 tt~~G~i~pl~~i~~i~~~~gi~lhvD~A 42 (239)
+...|..++++++++-||++||.+++|..
T Consensus 68 ~~~~G~~~d~~~lv~~~h~~Gi~VilD~V 96 (422)
T 1ua7_A 68 NRYLGTEQEFKEMCAAAEEYGIKVIVDAV 96 (422)
T ss_dssp ETTTEEHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred CCCCCCHHHHHHHHHHHHHCCCEEEEEec
Confidence 45578999999999999999999999985
No 267
>1uok_A Oligo-1,6-glucosidase; sugar degradation, hydrolase, TIM-barrel glycosidase; 2.00A {Bacillus cereus} SCOP: b.71.1.1 c.1.8.1
Probab=56.91 E-value=5 Score=35.57 Aligned_cols=30 Identities=7% Similarity=0.039 Sum_probs=26.8
Q ss_pred CCCCcccccChhHHHHHHHHhCCEEEEecc
Q 048438 13 GTTAITAVDPLKPLCDVAKQFGIWVHVDAA 42 (239)
Q Consensus 13 gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A 42 (239)
.....|+.++++++++-||++||.+++|..
T Consensus 71 id~~~Gt~~df~~lv~~~h~~Gi~VilD~V 100 (558)
T 1uok_A 71 IMNEFGTMEDWDELLHEMHERNMKLMMDLV 100 (558)
T ss_dssp ECGGGCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCcccCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 345678999999999999999999999985
No 268
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A
Probab=55.64 E-value=5.4 Score=35.64 Aligned_cols=30 Identities=23% Similarity=0.281 Sum_probs=27.0
Q ss_pred CCCCcccccChhHHHHHHHHhCCEEEEecc
Q 048438 13 GTTAITAVDPLKPLCDVAKQFGIWVHVDAA 42 (239)
Q Consensus 13 gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A 42 (239)
.+...|+.++++++++-||++||.+++|..
T Consensus 212 id~~~Gt~~dfk~lv~~~H~~Gi~VilD~V 241 (585)
T 1wzl_A 212 IDPQFGDLPTFRRLVDEAHRRGIKIILDAV 241 (585)
T ss_dssp ECTTTCCHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred cCcccCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 456688899999999999999999999985
No 269
>2ze0_A Alpha-glucosidase; TIM barrel, glucoside hydrolase, extremophIle, hydrolase; 2.00A {Geobacillus SP}
Probab=55.51 E-value=5.3 Score=35.39 Aligned_cols=29 Identities=21% Similarity=0.255 Sum_probs=26.2
Q ss_pred CCCcccccChhHHHHHHHHhCCEEEEecc
Q 048438 14 TTAITAVDPLKPLCDVAKQFGIWVHVDAA 42 (239)
Q Consensus 14 tt~~G~i~pl~~i~~i~~~~gi~lhvD~A 42 (239)
....|+.++++++++-||++|+.+++|..
T Consensus 72 d~~~Gt~~d~~~lv~~~h~~Gi~vilD~V 100 (555)
T 2ze0_A 72 MDEFGTMDDFDELLAQAHRRGLKVILDLV 100 (555)
T ss_dssp CGGGCCHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CcccCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 45678899999999999999999999985
No 270
>3bmv_A Cyclomaltodextrin glucanotransferase; glycosidase, thermostable, family 13 glycosyl hydrolas; 1.60A {Thermoanaerobacterium thermosulfurigenorganism_taxid} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 3bmw_A* 1ciu_A 1a47_A 1pj9_A* 1cgt_A
Probab=55.22 E-value=6.4 Score=35.90 Aligned_cols=30 Identities=20% Similarity=0.203 Sum_probs=27.0
Q ss_pred CCCCcccccChhHHHHHHHHhCCEEEEecc
Q 048438 13 GTTAITAVDPLKPLCDVAKQFGIWVHVDAA 42 (239)
Q Consensus 13 gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A 42 (239)
.....|+.+++++|++-||++||.+++|..
T Consensus 109 idp~~Gt~~dfk~Lv~~aH~~GikVilD~V 138 (683)
T 3bmv_A 109 TNPYFGSFTDFQNLINTAHAHNIKVIIDFA 138 (683)
T ss_dssp ECTTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCcccCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 346688999999999999999999999986
No 271
>3aj7_A Oligo-1,6-glucosidase; (beta/alpha)8-barrel, hydrolase; 1.30A {Saccharomyces cerevisiae} PDB: 3a4a_A* 3a47_A 3axi_A* 3axh_A*
Probab=55.08 E-value=6.5 Score=35.16 Aligned_cols=30 Identities=10% Similarity=0.044 Sum_probs=26.8
Q ss_pred CCCCcccccChhHHHHHHHHhCCEEEEecc
Q 048438 13 GTTAITAVDPLKPLCDVAKQFGIWVHVDAA 42 (239)
Q Consensus 13 gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A 42 (239)
.....|+.++++++++-||++||.+++|..
T Consensus 80 id~~~Gt~~df~~lv~~~h~~Gi~VilD~V 109 (589)
T 3aj7_A 80 VWPTYGTNEDCFALIEKTHKLGMKFITDLV 109 (589)
T ss_dssp ECTTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cccccCCHHHHHHHHHHHHHCCCEEEEEec
Confidence 346678999999999999999999999986
No 272
>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus}
Probab=54.25 E-value=5.8 Score=36.26 Aligned_cols=30 Identities=13% Similarity=0.151 Sum_probs=27.1
Q ss_pred CCCCcccccChhHHHHHHHHhCCEEEEecc
Q 048438 13 GTTAITAVDPLKPLCDVAKQFGIWVHVDAA 42 (239)
Q Consensus 13 gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A 42 (239)
.....|+.+++++|++-||++||.+++|..
T Consensus 304 idp~~Gt~~df~~Lv~~aH~~GikVilD~V 333 (696)
T 4aee_A 304 IDKYLGTMEDFEKLVQVLHSRKIKIVLDIT 333 (696)
T ss_dssp ECGGGCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCcccCCHHHHHHHHHHHHHCCCEEEEecc
Confidence 346679999999999999999999999996
No 273
>4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus}
Probab=54.05 E-value=6.3 Score=35.64 Aligned_cols=31 Identities=19% Similarity=0.149 Sum_probs=27.7
Q ss_pred cCCCCcccccChhHHHHHHHHhCCEEEEecc
Q 048438 12 IGTTAITAVDPLKPLCDVAKQFGIWVHVDAA 42 (239)
Q Consensus 12 ~gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A 42 (239)
......|+.++++++++-||++||.+++|..
T Consensus 277 ~idp~~Gt~~df~~LV~~aH~~GI~VIlD~V 307 (645)
T 4aef_A 277 HVARRLGGDRAFVDLLSELKRFDIKVILDGV 307 (645)
T ss_dssp EECGGGTCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred ccCcccCCHHHHHHHHHHhhhcCCEEEEEec
Confidence 3456789999999999999999999999996
No 274
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=53.73 E-value=5.9 Score=35.37 Aligned_cols=30 Identities=33% Similarity=0.382 Sum_probs=26.7
Q ss_pred CCCCcccccChhHHHHHHHHhCCEEEEecc
Q 048438 13 GTTAITAVDPLKPLCDVAKQFGIWVHVDAA 42 (239)
Q Consensus 13 gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A 42 (239)
.+...|+.++++++++-||++||.+++|..
T Consensus 211 idp~~Gt~~df~~lv~~~H~~Gi~VilD~V 240 (583)
T 1ea9_C 211 IDPQFGDKDTLKKLVDLCHERGIRVLLDAV 240 (583)
T ss_dssp CCTTTCCHHHHHHHHHHHTTTTCEEEEECC
T ss_pred cCcccCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 345678899999999999999999999996
No 275
>1g5a_A Amylosucrase; glycosyltransferase, glycoside hydrolase, (beta-alpha)8 barrel; HET: EPE; 1.40A {Neisseria polysaccharea} SCOP: b.71.1.1 c.1.8.1 PDB: 1jg9_A* 1mw1_A* 1mw2_A* 1mw3_A* 3ueq_A* 1jgi_A* 1mvy_A* 1mw0_A* 1s46_A* 1zs2_A*
Probab=53.49 E-value=7.1 Score=35.24 Aligned_cols=29 Identities=21% Similarity=0.274 Sum_probs=26.0
Q ss_pred CCCcccccChhHHHHHHHHhCCEEEEecc
Q 048438 14 TTAITAVDPLKPLCDVAKQFGIWVHVDAA 42 (239)
Q Consensus 14 tt~~G~i~pl~~i~~i~~~~gi~lhvD~A 42 (239)
....|+.++++++++-||++||.+++|..
T Consensus 156 dp~~Gt~~d~~~Lv~~ah~~GI~VilD~V 184 (628)
T 1g5a_A 156 NPALGTIGDLREVIAALHEAGISAVVDFI 184 (628)
T ss_dssp CTTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CccCCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 45678889999999999999999999985
No 276
>2zic_A Dextran glucosidase; TIM barrel, (beta/alpha)8-barrel, hydrolase; 2.20A {Streptococcus mutans} PDB: 2zid_A*
Probab=53.23 E-value=5.2 Score=35.34 Aligned_cols=29 Identities=21% Similarity=0.209 Sum_probs=26.2
Q ss_pred CCCcccccChhHHHHHHHHhCCEEEEecc
Q 048438 14 TTAITAVDPLKPLCDVAKQFGIWVHVDAA 42 (239)
Q Consensus 14 tt~~G~i~pl~~i~~i~~~~gi~lhvD~A 42 (239)
....|+.++++++++-||++||.+++|..
T Consensus 72 dp~~Gt~~df~~lv~~~h~~Gi~VilD~V 100 (543)
T 2zic_A 72 ADIFGNMADMDNLLTQAKMRGIKIIMDLV 100 (543)
T ss_dssp CGGGCCHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred CcccCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 45678899999999999999999999985
No 277
>3zss_A Putative glucanohydrolase PEP1A; alpha-glucan biosynthesis, glycoside hydrolase FA; 1.80A {Streptomyces coelicolor} PDB: 3zst_A* 3zt5_A* 3zt6_A* 3zt7_A*
Probab=51.60 E-value=8.1 Score=35.39 Aligned_cols=30 Identities=20% Similarity=0.341 Sum_probs=26.7
Q ss_pred CCCcccccChhHHHHHHHHhCCEEEEeccc
Q 048438 14 TTAITAVDPLKPLCDVAKQFGIWVHVDAAY 43 (239)
Q Consensus 14 tt~~G~i~pl~~i~~i~~~~gi~lhvD~A~ 43 (239)
....|+.++++++++-||++|+.+++|.+.
T Consensus 314 dp~~Gt~edfk~LV~~aH~~GI~VilD~V~ 343 (695)
T 3zss_A 314 HPALGTLDDFDHFVTEAGKLGLEIALDFAL 343 (695)
T ss_dssp CTTTCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CcccCCHHHHHHHHHHHHHCCCEEEEEeec
Confidence 456788899999999999999999999874
No 278
>3czg_A Sucrose hydrolase; (alpha/beta)8-barrel; HET: GLC; 1.80A {Xanthomonas axonopodis PV} PDB: 3cze_A* 3czl_A* 3czk_A* 2wpg_A
Probab=51.18 E-value=7 Score=35.39 Aligned_cols=29 Identities=21% Similarity=0.250 Sum_probs=26.0
Q ss_pred CCCcccccChhHHHHHHHHhCCEEEEecc
Q 048438 14 TTAITAVDPLKPLCDVAKQFGIWVHVDAA 42 (239)
Q Consensus 14 tt~~G~i~pl~~i~~i~~~~gi~lhvD~A 42 (239)
....|+.++++++++-||++||.+++|..
T Consensus 149 dp~~Gt~~df~~Lv~~aH~~GI~VilD~V 177 (644)
T 3czg_A 149 EPSLGSNDDLVALTSRLREAGISLCADFV 177 (644)
T ss_dssp CGGGCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CcccCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 45578899999999999999999999985
No 279
>1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich, transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A*
Probab=50.32 E-value=7.5 Score=34.96 Aligned_cols=30 Identities=23% Similarity=0.228 Sum_probs=26.7
Q ss_pred CCCCcccccChhHHHHHHHHhCCEEEEecc
Q 048438 13 GTTAITAVDPLKPLCDVAKQFGIWVHVDAA 42 (239)
Q Consensus 13 gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A 42 (239)
.+...|+.++++++++-||++||.+++|..
T Consensus 197 ~~~~~Gt~~~~~~lv~~~H~~Gi~VilD~V 226 (617)
T 1m7x_A 197 PTRRFGTRDDFRYFIDAAHAAGLNVILDWV 226 (617)
T ss_dssp ECGGGSCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCccCCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 355678899999999999999999999985
No 280
>2bhu_A Maltooligosyltrehalose trehalohydrolase; alpha-amylase, protein-carbohydrate complex, desiccation resistance; HET: TRS PGE; 1.1A {Deinococcus radiodurans} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 2bhy_A* 2bhz_A* 2bxy_A* 2bxz_A* 2by0_A* 2by1_A* 2by2_A* 2by3_A*
Probab=48.75 E-value=8.3 Score=34.62 Aligned_cols=30 Identities=23% Similarity=0.321 Sum_probs=26.6
Q ss_pred CCCCcccccChhHHHHHHHHhCCEEEEecc
Q 048438 13 GTTAITAVDPLKPLCDVAKQFGIWVHVDAA 42 (239)
Q Consensus 13 gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A 42 (239)
.....|+.++++++++-||++||.+++|-.
T Consensus 185 ~~~~~Gt~~d~~~lv~~~H~~Gi~VilD~V 214 (602)
T 2bhu_A 185 PYAPYGRPEDLMALVDAAHRLGLGVFLDVV 214 (602)
T ss_dssp ECGGGCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCcCCCCHHHHHHHHHHHHHCCCEEEEEec
Confidence 345678899999999999999999999985
No 281
>3vgf_A Malto-oligosyltrehalose trehalohydrolase; alpha/beta barrel, alpha-amylas hydrolase; HET: GLC FLC; 2.30A {Sulfolobus solfataricus} PDB: 3vge_A* 3vgd_A* 3vgb_A* 1eh9_A* 3vgh_A* 3vgg_A* 1eha_A
Probab=47.43 E-value=8.3 Score=34.21 Aligned_cols=30 Identities=20% Similarity=0.243 Sum_probs=27.0
Q ss_pred CCCCcccccChhHHHHHHHHhCCEEEEecc
Q 048438 13 GTTAITAVDPLKPLCDVAKQFGIWVHVDAA 42 (239)
Q Consensus 13 gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A 42 (239)
..+..|..++++++++-||++|+.+++|.+
T Consensus 160 ~~~~~Gt~~d~~~lv~~~h~~Gi~VilD~V 189 (558)
T 3vgf_A 160 VQNSYGGPEGFRKLVDEAHKKGLGVILDVV 189 (558)
T ss_dssp ECGGGTHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cccccCCHHHHHHHHHHHHHcCCEEEEEEe
Confidence 356788899999999999999999999986
No 282
>3m07_A Putative alpha amylase; IDP00968, csgid, structural genomics, center for structural genomics of infectious diseases, unknown function; HET: BTB PG4 PGE; 1.40A {Salmonella enterica subsp}
Probab=47.31 E-value=10 Score=34.11 Aligned_cols=30 Identities=27% Similarity=0.386 Sum_probs=27.3
Q ss_pred CCCCcccccChhHHHHHHHHhCCEEEEecc
Q 048438 13 GTTAITAVDPLKPLCDVAKQFGIWVHVDAA 42 (239)
Q Consensus 13 gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A 42 (239)
..+..|..++++++++-||++||.+++|.+
T Consensus 195 ~~~~~G~~~~~~~lv~~~H~~Gi~VilD~V 224 (618)
T 3m07_A 195 PHSAYGTPDDFKAFIDAAHGYGLSVVLDIV 224 (618)
T ss_dssp ECTTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCcCcCCHHHHHHHHHHHHHCCCEEEEeec
Confidence 456788999999999999999999999986
No 283
>3ucq_A Amylosucrase; thermostability, amylose synthesis, sucrose isomerization, beta/alpha-barrel, carbohydrate binding, transferase; 1.97A {Deinococcus geothermalis} PDB: 3uer_A*
Probab=45.96 E-value=9.3 Score=34.65 Aligned_cols=30 Identities=20% Similarity=0.254 Sum_probs=27.4
Q ss_pred CCCCcccccChhHHHHHHHHhCCEEEEecc
Q 048438 13 GTTAITAVDPLKPLCDVAKQFGIWVHVDAA 42 (239)
Q Consensus 13 gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A 42 (239)
..+..|+.++++++++-||++|+.+++|..
T Consensus 153 i~~~~Gt~~d~~~lv~~~h~~Gi~Vi~D~V 182 (655)
T 3ucq_A 153 VRPDLGTMDDLSALARALRGRGISLVLDLV 182 (655)
T ss_dssp ECGGGCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCccCCCHHHHHHHHHHHHHCCCEEEEEee
Confidence 467789999999999999999999999985
No 284
>3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis}
Probab=45.31 E-value=10 Score=34.92 Aligned_cols=30 Identities=33% Similarity=0.340 Sum_probs=27.1
Q ss_pred CCCCcccccChhHHHHHHHHhCCEEEEecc
Q 048438 13 GTTAITAVDPLKPLCDVAKQFGIWVHVDAA 42 (239)
Q Consensus 13 gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A 42 (239)
.++..|+.++++++++-||++||.+++|.+
T Consensus 305 ~~~~yGt~~dfk~lV~~~H~~GI~VilD~V 334 (722)
T 3k1d_A 305 PTSRFGTPDDFRALVDALHQAGIGVIVDWV 334 (722)
T ss_dssp ECGGGCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred ccccCCCHHHHHHHHHHHHHcCCEEEEEEE
Confidence 356788899999999999999999999986
No 285
>1ijb_A VON willebrand factor; dinucleotide-binding fold, blood clotting; 1.80A {Homo sapiens} SCOP: c.62.1.1 PDB: 1ijk_A 1auq_A 1u0n_A 3hxo_A 1uex_C 3hxq_A 1sq0_A 1m10_A 1fns_A 1oak_A 1u0o_C
Probab=43.66 E-value=36 Score=25.25 Aligned_cols=35 Identities=9% Similarity=-0.074 Sum_probs=25.1
Q ss_pred ccEEEEEecCCCCcccccChhHHHHHHHHhCCEEE
Q 048438 4 IPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVH 38 (239)
Q Consensus 4 ~p~~vv~t~gtt~~G~i~pl~~i~~i~~~~gi~lh 38 (239)
...+|++|-|.+..+..+++.+.++.+++.|+.++
T Consensus 116 ~~~iillTDG~~~~~~~~~~~~~a~~l~~~gi~i~ 150 (202)
T 1ijb_A 116 SRIALLLMASQEPQRMSRNFVRYVQGLKKKKVIVI 150 (202)
T ss_dssp EEEEEEEECCCCCGGGCTTHHHHHHHHHHTTEEEE
T ss_pred CeEEEEEccCCCCccchHHHHHHHHHHHHCCCEEE
Confidence 45678888887766656677777777777777665
No 286
>3k8k_A Alpha-amylase, SUSG; alpha8/BETA8 barrel, CBM, beta-sandwich, membrane protein; 2.20A {Bacteroides thetaiotaomicron} PDB: 3k8m_A* 3k8l_A*
Probab=41.96 E-value=14 Score=33.68 Aligned_cols=30 Identities=17% Similarity=0.157 Sum_probs=26.9
Q ss_pred CCCCcccccChhHHHHHHHHhCCEEEEecc
Q 048438 13 GTTAITAVDPLKPLCDVAKQFGIWVHVDAA 42 (239)
Q Consensus 13 gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A 42 (239)
.....|+.++++++++-||++|+.+++|..
T Consensus 99 i~~~~Gt~~d~~~lv~~~h~~gi~vi~D~V 128 (669)
T 3k8k_A 99 VNPQLGTESDFDRLVTEAHNRGIKIYLDYV 128 (669)
T ss_dssp CCTTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cccccCCHHHHHHHHHHHHHcCCEEEEEEC
Confidence 345679999999999999999999999986
No 287
>3aml_A OS06G0726400 protein; starch-branching, transferase; HET: EPE; 1.70A {Oryza sativa japonica group} PDB: 3amk_A
Probab=41.48 E-value=12 Score=34.54 Aligned_cols=29 Identities=28% Similarity=0.374 Sum_probs=26.5
Q ss_pred CCCcccccChhHHHHHHHHhCCEEEEecc
Q 048438 14 TTAITAVDPLKPLCDVAKQFGIWVHVDAA 42 (239)
Q Consensus 14 tt~~G~i~pl~~i~~i~~~~gi~lhvD~A 42 (239)
++..|+.++++++++-||++||.+++|..
T Consensus 244 ~~~~Gt~~df~~lv~~~H~~Gi~VilD~V 272 (755)
T 3aml_A 244 SSRSGTPEDLKYLVDKAHSLGLRVLMDVV 272 (755)
T ss_dssp CGGGCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 56678899999999999999999999985
No 288
>1iv8_A Maltooligosyl trehalose synthase; beta alpha barrel, intramolecular transglucosylation, isomerase; HET: MLZ MLY; 1.90A {Sulfolobus acidocaldarius} SCOP: b.71.1.1 c.1.8.1
Probab=40.62 E-value=19 Score=33.09 Aligned_cols=31 Identities=13% Similarity=0.154 Sum_probs=27.8
Q ss_pred cCCCCcccccChhHHHHHHHHhCCEEEEecc
Q 048438 12 IGTTAITAVDPLKPLCDVAKQFGIWVHVDAA 42 (239)
Q Consensus 12 ~gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A 42 (239)
......|..++++++++-||++|+.+++|..
T Consensus 57 ~Idp~lGt~edfk~LV~aaH~~GIkVIlDvV 87 (720)
T 1iv8_A 57 RINDELGGEKEYRRLIETAHTIGLGIIQDIV 87 (720)
T ss_dssp EECTTTTHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CcCccCCCHHHHHHHHHHHHHCCCEEEEEec
Confidence 3456789999999999999999999999996
No 289
>3aie_A Glucosyltransferase-SI; beta-alpha-barrels; HET: MES; 2.10A {Streptococcus mutans} PDB: 3aic_A* 3aib_A*
Probab=39.52 E-value=16 Score=34.25 Aligned_cols=28 Identities=21% Similarity=0.119 Sum_probs=26.3
Q ss_pred CCcccccChhHHHHHHHHhCCEEEEecc
Q 048438 15 TAITAVDPLKPLCDVAKQFGIWVHVDAA 42 (239)
Q Consensus 15 t~~G~i~pl~~i~~i~~~~gi~lhvD~A 42 (239)
+..|+.++++++++-||++||.+++|-.
T Consensus 687 ~~~Gt~~df~~lv~~~H~~GI~VilD~V 714 (844)
T 3aie_A 687 NKYGTADDLVKAIKALHSKGIKVMADWV 714 (844)
T ss_dssp BTTBCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 6789999999999999999999999986
No 290
>1ji1_A Alpha-amylase I; beta/alpha barrel, hydrolase; 1.60A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1uh3_A* 2d0f_A* 1izj_A 1uh4_A* 1uh2_A* 2d0g_A* 2d0h_A* 1izk_A
Probab=38.49 E-value=12 Score=33.62 Aligned_cols=31 Identities=13% Similarity=0.117 Sum_probs=27.3
Q ss_pred cCCCCcccccChhHHHHHHHHhC--C--EEEEecc
Q 048438 12 IGTTAITAVDPLKPLCDVAKQFG--I--WVHVDAA 42 (239)
Q Consensus 12 ~gtt~~G~i~pl~~i~~i~~~~g--i--~lhvD~A 42 (239)
......|+.++++++++-||++| | .+++|..
T Consensus 230 ~id~~~Gt~~dfk~LV~~~H~~G~~I~~~VIlD~V 264 (637)
T 1ji1_A 230 AVDPAFGDNSTLQTLINDIHSTANGPKGYLILDGV 264 (637)
T ss_dssp EECTTTCCHHHHHHHHHHHHCSSSSSCCEEEEEEC
T ss_pred hhccccCCHHHHHHHHHHHHhCCCCccceEEEEEC
Confidence 34566789999999999999999 9 9999985
No 291
>2wsk_A Glycogen debranching enzyme; carbohydrate metabolism, hydrolase, glycosidase, ISO-amylase glycosyl hydrolase, glycogen metabolism; 2.25A {Escherichia coli k-12}
Probab=38.49 E-value=16 Score=33.18 Aligned_cols=24 Identities=25% Similarity=0.315 Sum_probs=22.6
Q ss_pred cccChhHHHHHHHHhCCEEEEecc
Q 048438 19 AVDPLKPLCDVAKQFGIWVHVDAA 42 (239)
Q Consensus 19 ~i~pl~~i~~i~~~~gi~lhvD~A 42 (239)
+.++++++++-||++||.+++|..
T Consensus 240 ~~~d~~~lv~~~H~~Gi~VilD~V 263 (657)
T 2wsk_A 240 ALDEFRDAIKALHKAGIEVILDIV 263 (657)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEe
Confidence 689999999999999999999985
No 292
>3ttq_A Dextransucrase; (beta/alpha)8 barrel, transferase; HET: PG4; 1.90A {Leuconostoc mesenteroides} PDB: 3tto_A*
Probab=37.49 E-value=18 Score=34.81 Aligned_cols=29 Identities=14% Similarity=0.102 Sum_probs=26.8
Q ss_pred CCCcccccChhHHHHHHHHhCCEEEEecc
Q 048438 14 TTAITAVDPLKPLCDVAKQFGIWVHVDAA 42 (239)
Q Consensus 14 tt~~G~i~pl~~i~~i~~~~gi~lhvD~A 42 (239)
.+..|..++++++++.||++||.+++|-+
T Consensus 906 ~~~yGt~edfk~LV~alH~~GI~VIlDvV 934 (1108)
T 3ttq_A 906 PTKYGTDGDLRATIQALHHANMQVMADVV 934 (1108)
T ss_dssp CCSSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCCCHHHHHHHHHHHHHCCCEEEEEec
Confidence 56689999999999999999999999986
No 293
>1v77_A PH1877P, hypothetical protein PH1877; RNAse P protein, TIM-barrel, RNA binding protein; 1.80A {Pyrococcus horikoshii} SCOP: c.6.3.2 PDB: 2czv_A*
Probab=36.06 E-value=16 Score=27.93 Aligned_cols=18 Identities=6% Similarity=0.001 Sum_probs=9.7
Q ss_pred HHHHHHHHhCCEEEEecc
Q 048438 25 PLCDVAKQFGIWVHVDAA 42 (239)
Q Consensus 25 ~i~~i~~~~gi~lhvD~A 42 (239)
++++.|+++|+.+=+.-+
T Consensus 115 ~~a~~A~e~gv~lEIn~s 132 (212)
T 1v77_A 115 VLAKLMVKKNVALGFSLR 132 (212)
T ss_dssp HHHHHHHHHTCEEEEESH
T ss_pred HHHHHHHHCCeEEEEECc
Confidence 555555555555555554
No 294
>2e8y_A AMYX protein, pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, HY; 2.11A {Bacillus subtilis} PDB: 2e8z_A* 2e9b_A*
Probab=35.58 E-value=14 Score=33.87 Aligned_cols=24 Identities=25% Similarity=0.360 Sum_probs=22.3
Q ss_pred cccChhHHHHHHHHhCCEEEEecc
Q 048438 19 AVDPLKPLCDVAKQFGIWVHVDAA 42 (239)
Q Consensus 19 ~i~pl~~i~~i~~~~gi~lhvD~A 42 (239)
.+++++++++-||++||.+++|..
T Consensus 314 ~~~dfk~LV~~aH~~GI~VIlDvV 337 (718)
T 2e8y_A 314 RKTELKQMINTLHQHGLRVILDVV 337 (718)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cHHHHHHHHHHHHHCCCEEEEEEe
Confidence 578999999999999999999985
No 295
>3hje_A 704AA long hypothetical glycosyltransferase; trehalose biosynthesis, maltooligoside trehalose synthase (M family 13 glycoside hydrolases; 1.90A {Sulfolobus tokodaii str}
Probab=34.77 E-value=23 Score=32.37 Aligned_cols=31 Identities=19% Similarity=0.130 Sum_probs=27.8
Q ss_pred cCCCCcccccChhHHHHHHHHhCCEEEEecc
Q 048438 12 IGTTAITAVDPLKPLCDVAKQFGIWVHVDAA 42 (239)
Q Consensus 12 ~gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A 42 (239)
...+..|..++++++++-||++|+.+++|..
T Consensus 55 ~vdp~lGt~edfk~LV~~aH~~GI~VilDvV 85 (704)
T 3hje_A 55 TINDELGGEEEYIRLIDEAKSKGLGIIQDIV 85 (704)
T ss_dssp EECGGGTHHHHHHHHHHHHHHHTCEEEEEEC
T ss_pred CcCccCCCHHHHHHHHHHHHHCCCEEEEeec
Confidence 4456788999999999999999999999996
No 296
>3klk_A Glucansucrase; native form, open conformation, multidomain protein, glycosyltransferase, transferase; 1.65A {Lactobacillus reuteri} PDB: 3kll_A* 3hz3_A* 4amc_A
Probab=34.76 E-value=20 Score=34.44 Aligned_cols=29 Identities=10% Similarity=0.085 Sum_probs=26.3
Q ss_pred CCCcccccChhHHHHHHHHhCCEEEEecc
Q 048438 14 TTAITAVDPLKPLCDVAKQFGIWVHVDAA 42 (239)
Q Consensus 14 tt~~G~i~pl~~i~~i~~~~gi~lhvD~A 42 (239)
.+..|..++++++++-||++||.+++|-+
T Consensus 739 ~~~~Gt~~efk~lV~alH~~GI~VIlDvV 767 (1039)
T 3klk_A 739 PNKYGSDEDLRNALQALHKAGLQAIADWV 767 (1039)
T ss_dssp CBTTBCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 35678999999999999999999999986
No 297
>1bf2_A Isoamylase; hydrolase, glycosidase, debranching enzyme; 2.00A {Pseudomonas amyloderamosa} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=33.83 E-value=20 Score=33.09 Aligned_cols=23 Identities=17% Similarity=0.267 Sum_probs=21.8
Q ss_pred ccChhHHHHHHHHhCCEEEEecc
Q 048438 20 VDPLKPLCDVAKQFGIWVHVDAA 42 (239)
Q Consensus 20 i~pl~~i~~i~~~~gi~lhvD~A 42 (239)
.++++++++-||++||.+++|.+
T Consensus 272 ~~efk~lV~~~H~~Gi~VilDvV 294 (750)
T 1bf2_A 272 TAEFQAMVQAFHNAGIKVYMDVV 294 (750)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEe
Confidence 88999999999999999999986
No 298
>2wan_A Pullulanase; hydrolase, glycoside hydrolase, polysaccharide, amylase, starch, carbohydrate; 1.65A {Bacillus acidopullulyticus}
Probab=33.46 E-value=24 Score=33.44 Aligned_cols=26 Identities=27% Similarity=0.243 Sum_probs=23.7
Q ss_pred ccc--ccChhHHHHHHHHhCCEEEEecc
Q 048438 17 ITA--VDPLKPLCDVAKQFGIWVHVDAA 42 (239)
Q Consensus 17 ~G~--i~pl~~i~~i~~~~gi~lhvD~A 42 (239)
.|. +++++++++-||++||.+++|..
T Consensus 526 ~Gt~~~~dfk~LV~~aH~~GI~VILDvV 553 (921)
T 2wan_A 526 EGTARITELKQLIQSLHQQRIGVNMDVV 553 (921)
T ss_dssp STTHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCccHHHHHHHHHHHHHcCCEEEEEEc
Confidence 566 78999999999999999999985
No 299
>2vr5_A Glycogen operon protein GLGX; hydrolase, glycosidase, glycosyl hydrolase, glycogen debraching; HET: GLC A16; 2.8A {Sulfolobus solfataricus} PDB: 2vnc_A* 2vuy_A
Probab=32.84 E-value=18 Score=33.24 Aligned_cols=23 Identities=26% Similarity=0.303 Sum_probs=21.5
Q ss_pred ccChhHHHHHHHHhCCEEEEecc
Q 048438 20 VDPLKPLCDVAKQFGIWVHVDAA 42 (239)
Q Consensus 20 i~pl~~i~~i~~~~gi~lhvD~A 42 (239)
+++++++++-||++||.+++|.+
T Consensus 266 ~~dfk~lv~~~H~~Gi~VilDvV 288 (718)
T 2vr5_A 266 VLSFKKMVNELHNAGIEVIIDVV 288 (718)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEEec
Confidence 78999999999999999999985
No 300
>1gjw_A Maltodextrin glycosyltransferase; alpha-amylase, maltosyltransferase; HET: MAL GLC; 2.1A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1gju_A*
Probab=32.83 E-value=22 Score=32.06 Aligned_cols=25 Identities=20% Similarity=0.329 Sum_probs=22.7
Q ss_pred ccccChhHHHHHHHHhCCEEEEecc
Q 048438 18 TAVDPLKPLCDVAKQFGIWVHVDAA 42 (239)
Q Consensus 18 G~i~pl~~i~~i~~~~gi~lhvD~A 42 (239)
|.+++++++++-||++||.+++|..
T Consensus 179 ~~~~~~~~lv~~~H~~Gi~VilD~V 203 (637)
T 1gjw_A 179 KVDEEFKAFVEACHILGIRVILDFI 203 (637)
T ss_dssp CHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred chHHHHHHHHHHHHHCCCEEEEEEC
Confidence 4479999999999999999999986
No 301
>2ya0_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; 1.85A {Streptococcus pneumoniae} PDB: 2ya2_A*
Probab=31.83 E-value=22 Score=32.59 Aligned_cols=23 Identities=17% Similarity=0.257 Sum_probs=21.4
Q ss_pred ccChhHHHHHHHHhCCEEEEecc
Q 048438 20 VDPLKPLCDVAKQFGIWVHVDAA 42 (239)
Q Consensus 20 i~pl~~i~~i~~~~gi~lhvD~A 42 (239)
+++++++++-||++||.+++|..
T Consensus 254 ~~efk~lV~~~H~~Gi~VilDvV 276 (714)
T 2ya0_A 254 IAEFKNLINEIHKRGMGAILDVV 276 (714)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEEec
Confidence 68899999999999999999986
No 302
>3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai}
Probab=29.96 E-value=35 Score=26.88 Aligned_cols=23 Identities=35% Similarity=0.444 Sum_probs=19.5
Q ss_pred cccChhHHHHHHHHhCCEEEEec
Q 048438 19 AVDPLKPLCDVAKQFGIWVHVDA 41 (239)
Q Consensus 19 ~i~pl~~i~~i~~~~gi~lhvD~ 41 (239)
....++++.++|+++|+.+++|-
T Consensus 88 ~~~~~d~~~~~a~~~Gi~vil~~ 110 (351)
T 3vup_A 88 MLDDMKDLLDTAKKYNILVFPCL 110 (351)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHHHCCCeEEEEe
Confidence 35567899999999999998875
No 303
>3pzt_A Endoglucanase; alpha/beta barrel, glycosyl hydrolase, cellulose binding, HY; 1.97A {Bacillus subtilis subsp} PDB: 3pzu_A 3pzv_A
Probab=29.79 E-value=33 Score=27.93 Aligned_cols=22 Identities=32% Similarity=0.537 Sum_probs=19.4
Q ss_pred ccChhHHHHHHHHhCCEEEEec
Q 048438 20 VDPLKPLCDVAKQFGIWVHVDA 41 (239)
Q Consensus 20 i~pl~~i~~i~~~~gi~lhvD~ 41 (239)
++.++++.+.|+++|+++++|-
T Consensus 104 ~~~ld~~v~~a~~~Gi~VilD~ 125 (327)
T 3pzt_A 104 KNKVKEAVEAAKELGIYVIIDW 125 (327)
T ss_dssp HHHHHHHHHHHHHHTCEEEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEEe
Confidence 4557999999999999999996
No 304
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=29.57 E-value=88 Score=24.66 Aligned_cols=28 Identities=11% Similarity=-0.006 Sum_probs=22.5
Q ss_pred ccChhHHHHHHHHhCCEEEEeccccccc
Q 048438 20 VDPLKPLCDVAKQFGIWVHVDAAYAGSA 47 (239)
Q Consensus 20 i~pl~~i~~i~~~~gi~lhvD~A~~~~~ 47 (239)
..+|..+..+.+.+++.+++|..|+.|.
T Consensus 178 ~v~L~ai~~lk~~~~~pVi~d~sH~~g~ 205 (262)
T 1zco_A 178 TLDISAVPVVKELSHLPIIVDPSHPAGR 205 (262)
T ss_dssp BCCTTHHHHHHHHBSSCEEECSSTTTCS
T ss_pred hcCHHHHHHHHhhhCCCEEEEcCCCCCc
Confidence 4467788888777799999999998774
No 305
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=28.67 E-value=57 Score=21.90 Aligned_cols=54 Identities=13% Similarity=0.045 Sum_probs=31.4
Q ss_pred EEEEEecCCCCcccccChhHHHHHHHHhCCEEEEecccccccccCcccccccCCCCCcceEEEcCc
Q 048438 6 LFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIFPEFRHFIDGVEGADSFSLNAH 71 (239)
Q Consensus 6 ~~vv~t~gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A~~~~~~~~~~~~~~~~~~~~~Ds~~~~~h 71 (239)
+++++..|-| |+.+ ..++-+.++++|+-+.+.+. +.+. +++ .++..|.+..++|
T Consensus 9 IlL~C~aGmS-Tsll--v~km~~~a~~~gi~v~i~a~-~~~~--~~~------~~~~~DvvLLgPQ 62 (108)
T 3nbm_A 9 VLVLCAGSGT-SAQL--ANAINEGANLTEVRVIANSG-AYGA--HYD------IMGVYDLIILAPQ 62 (108)
T ss_dssp EEEEESSSSH-HHHH--HHHHHHHHHHHTCSEEEEEE-ETTS--CTT------TGGGCSEEEECGG
T ss_pred EEEECCCCCC-HHHH--HHHHHHHHHHCCCceEEEEc-chHH--HHh------hccCCCEEEEChH
Confidence 4566666643 3332 35777889999998888762 1111 111 1124888876665
No 306
>1shu_X Anthrax toxin receptor 2; alpha/beta rossmann fold, membrane protein; 1.50A {Homo sapiens} SCOP: c.62.1.1 PDB: 1tzn_a 1sht_X 1t6b_Y*
Probab=28.24 E-value=59 Score=23.21 Aligned_cols=36 Identities=11% Similarity=0.082 Sum_probs=20.9
Q ss_pred ccEEEEEecCCCCcccccChhHHHHHHHHhCCEEEE
Q 048438 4 IPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHV 39 (239)
Q Consensus 4 ~p~~vv~t~gtt~~G~i~pl~~i~~i~~~~gi~lhv 39 (239)
...+|++|-|....+....+.+.++.+++.|+.+++
T Consensus 104 ~~~iiliTDG~~~~~~~~~~~~~~~~~~~~~i~i~~ 139 (182)
T 1shu_X 104 SSIIIALTDGKLDGLVPSYAEKEAKISRSLGASVYC 139 (182)
T ss_dssp CEEEEEEECCCCCTTHHHHHHHHHHHHHHTTCEEEE
T ss_pred CeEEEEECCCCcCCCCchhHHHHHHHHHhCCCEEEE
Confidence 456677777765433333345566666667766654
No 307
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=26.24 E-value=45 Score=22.23 Aligned_cols=35 Identities=14% Similarity=0.300 Sum_probs=23.6
Q ss_pred EEEEEecCCCCcccccChhHHHHHHHHhCCEEEEeccc
Q 048438 6 LFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAY 43 (239)
Q Consensus 6 ~~vv~t~gtt~~G~i~pl~~i~~i~~~~gi~lhvD~A~ 43 (239)
+++++.+|-+.. .+ ++.+-+.++++|+-+.|+++-
T Consensus 6 Ill~Cg~G~sTS-~l--~~k~~~~~~~~gi~~~i~a~~ 40 (106)
T 1e2b_A 6 IYLFSSAGMSTS-LL--VSKMRAQAEKYEVPVIIEAFP 40 (106)
T ss_dssp EEEECSSSTTTH-HH--HHHHHHHHHHSCCSEEEEEEC
T ss_pred EEEECCCchhHH-HH--HHHHHHHHHHCCCCeEEEEec
Confidence 455555555433 33 348888999999998887743
No 308
>1x7f_A Outer surface protein; structural genomics, unknown function, MCSG, PSI, midwest center for struct genomics; 2.30A {Bacillus cereus atcc 14579} SCOP: b.62.1.2 c.1.8.12
Probab=26.11 E-value=51 Score=27.75 Aligned_cols=28 Identities=29% Similarity=0.206 Sum_probs=21.7
Q ss_pred cccccChhHHHHHHHHhCCEEEEecccc
Q 048438 17 ITAVDPLKPLCDVAKQFGIWVHVDAAYA 44 (239)
Q Consensus 17 ~G~i~pl~~i~~i~~~~gi~lhvD~A~~ 44 (239)
.-.+..+++|.++|+++|+-+++|=+-.
T Consensus 70 ~~~~~~~~~l~~~a~~~g~~vi~DVsp~ 97 (385)
T 1x7f_A 70 EEIVAEFKEIINHAKDNNMEVILDVAPA 97 (385)
T ss_dssp ----HHHHHHHHHHHHTTCEEEEEECTT
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEECCHH
Confidence 4456779999999999999999998654
No 309
>7a3h_A Endoglucanase; hydrolase, cellulose degradation, glycoside H family 5, michaelis complex, SKEW-BOAT, distortion; 0.95A {Bacillus agaradhaerens} SCOP: c.1.8.3 PDB: 1h2j_A* 1hf6_A* 1ocq_A* 1w3k_A* 1h11_A* 4a3h_A* 5a3h_A* 6a3h_A* 1w3l_A 8a3h_A* 2v38_A* 1qhz_A 1qi0_A* 1e5j_A* 1qi2_A* 1h5v_A* 1a3h_A 2a3h_A* 3a3h_A* 1lf1_A
Probab=26.04 E-value=43 Score=26.79 Aligned_cols=24 Identities=21% Similarity=0.304 Sum_probs=20.0
Q ss_pred ccChhHHHHHHHHhCCEEEEeccc
Q 048438 20 VDPLKPLCDVAKQFGIWVHVDAAY 43 (239)
Q Consensus 20 i~pl~~i~~i~~~~gi~lhvD~A~ 43 (239)
.+-++++.+.|+++|+.+++|--.
T Consensus 79 ~~~ld~~v~~a~~~Gi~Vild~H~ 102 (303)
T 7a3h_A 79 KEKVKEAVEAAIDLDIYVIIDWHI 102 (303)
T ss_dssp HHHHHHHHHHHHHHTCEEEEEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEEecc
Confidence 445788999999999999999743
No 310
>3ibs_A Conserved hypothetical protein BATB; structural genomics, protein structure, midwest center for S genomics, MCSG, PSI-2; HET: MSE; 2.10A {Bacteroides thetaiotaomicron}
Probab=25.93 E-value=82 Score=23.24 Aligned_cols=36 Identities=19% Similarity=0.054 Sum_probs=25.6
Q ss_pred CccEEEEEecCCCCcccccChhHHHHHHHHhCCEEEEec
Q 048438 3 LIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDA 41 (239)
Q Consensus 3 ~~p~~vv~t~gtt~~G~i~pl~~i~~i~~~~gi~lhvD~ 41 (239)
....+|++|-|....+ ++.++++.+++.|+.+++=|
T Consensus 111 ~~~~ivllTDG~~~~~---~~~~~~~~~~~~~i~v~~ig 146 (218)
T 3ibs_A 111 VGRAIIVITDGENHEG---GAVEAAKAAAEKGIQVSVLG 146 (218)
T ss_dssp CCEEEEEEECCTTCCS---CHHHHHHHHHTTTEEEEEEE
T ss_pred CCcEEEEEcCCCCCCC---cHHHHHHHHHhcCCEEEEEE
Confidence 3457888888877666 56777777888887766443
No 311
>1pt6_A Integrin alpha-1; cell adhesion; 1.87A {Homo sapiens} SCOP: c.62.1.1 PDB: 4a0q_A 1qcy_A 1qc5_A 1qc5_B 1ck4_A 1mhp_A
Probab=25.82 E-value=73 Score=23.60 Aligned_cols=35 Identities=14% Similarity=0.067 Sum_probs=25.0
Q ss_pred CccEEEEEecCCCCcccccChhHHHHHHHHhCCEEEE
Q 048438 3 LIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHV 39 (239)
Q Consensus 3 ~~p~~vv~t~gtt~~G~i~pl~~i~~i~~~~gi~lhv 39 (239)
...++|++|-|.+..+. ++.+.++.+++.|+.+++
T Consensus 109 ~~~~iillTDG~~~~~~--~~~~~~~~~~~~gi~i~~ 143 (213)
T 1pt6_A 109 VKKVMVIVTDGESHDNH--RLKKVIQDCEDENIQRFS 143 (213)
T ss_dssp CEEEEEEEESSCCSCSH--HHHHHHHHHHHTTEEEEE
T ss_pred CCeEEEEEcCCCCCCCc--cHHHHHHHHHHCCCEEEE
Confidence 35678889999876663 356677777888877664
No 312
>2b2x_A Integrin alpha-1; computational design, antibody-antigen complex, immune syste; 2.20A {Rattus norvegicus} SCOP: c.62.1.1
Probab=25.77 E-value=73 Score=23.84 Aligned_cols=36 Identities=14% Similarity=0.021 Sum_probs=25.9
Q ss_pred CccEEEEEecCCCCcccccChhHHHHHHHHhCCEEEEe
Q 048438 3 LIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVD 40 (239)
Q Consensus 3 ~~p~~vv~t~gtt~~G~i~pl~~i~~i~~~~gi~lhvD 40 (239)
...++|++|-|.+..+. ++.+.++.+++.|+.+++=
T Consensus 124 ~~~~iillTDG~~~~~~--~~~~~~~~~~~~gi~v~~i 159 (223)
T 2b2x_A 124 VKKVMVIVTDGESHDNY--RLKQVIQDCEDENIQRFSI 159 (223)
T ss_dssp SEEEEEEEESSCCTTGG--GHHHHHHHHHTTTEEEEEE
T ss_pred CCeEEEEEcCCCCCCCc--cHHHHHHHHHHCCCEEEEE
Confidence 34678889999877664 4667777778888877653
No 313
>1tvn_A Cellulase, endoglucanase G; glycoside hydrolase, CLAN GH-A, family 5-2; 1.41A {Pseudoalteromonas haloplanktis} SCOP: c.1.8.3 PDB: 1tvp_A*
Probab=25.51 E-value=45 Score=26.34 Aligned_cols=24 Identities=17% Similarity=0.235 Sum_probs=19.7
Q ss_pred ccChhHHHHHHHHhCCEEEEeccc
Q 048438 20 VDPLKPLCDVAKQFGIWVHVDAAY 43 (239)
Q Consensus 20 i~pl~~i~~i~~~~gi~lhvD~A~ 43 (239)
++-++++.+.|+++|+.+++|--+
T Consensus 78 ~~~ld~~v~~a~~~Gi~vild~h~ 101 (293)
T 1tvn_A 78 MSRLDTVVNAAIAEDMYVIIDFHS 101 (293)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEEcCC
Confidence 445678999999999999999643
No 314
>3bzy_B ESCU; auto cleavage protein, flagella, intein, T3SS, membrane, membrane protein, protein transport; 1.20A {Escherichia coli} SCOP: d.367.1.1 PDB: 3c00_B 3bzl_C 3bzo_B 3bzv_B 3c03_C 3bzz_B 3bzx_B
Probab=25.09 E-value=46 Score=21.30 Aligned_cols=18 Identities=22% Similarity=0.207 Sum_probs=16.5
Q ss_pred hHHHHHHHHhCCEEEEec
Q 048438 24 KPLCDVAKQFGIWVHVDA 41 (239)
Q Consensus 24 ~~i~~i~~~~gi~lhvD~ 41 (239)
.+|.++|+++|+.++=|-
T Consensus 30 ~~I~~~A~e~~VPi~e~~ 47 (83)
T 3bzy_B 30 LQIIKLAELYDIPVIEDI 47 (83)
T ss_dssp HHHHHHHHHTTCCEEECH
T ss_pred HHHHHHHHHcCCCEEeCH
Confidence 679999999999999887
No 315
>1qnr_A Endo-1,4-B-D-mannanase; hydrolase, anomalous scattering; HET: NAG MAB; 1.4A {Trichoderma reesei} SCOP: c.1.8.3 PDB: 1qno_A* 1qnq_A* 1qnp_A* 1qns_A*
Probab=24.98 E-value=35 Score=27.49 Aligned_cols=23 Identities=13% Similarity=0.170 Sum_probs=19.9
Q ss_pred ccChhHHHHHHHHhCCEEEEecc
Q 048438 20 VDPLKPLCDVAKQFGIWVHVDAA 42 (239)
Q Consensus 20 i~pl~~i~~i~~~~gi~lhvD~A 42 (239)
++.++++.+.|+++|+.+++|-.
T Consensus 89 ~~~ld~~i~~a~~~Gi~vild~~ 111 (344)
T 1qnr_A 89 LQTLDYVVQSAEQHNLKLIIPFV 111 (344)
T ss_dssp THHHHHHHHHHHHHTCEEEEESC
T ss_pred HHHHHHHHHHHHHCCCEEEEEec
Confidence 55578999999999999999963
No 316
>1n8f_A DAHP synthetase; (beta/alpha)8 barrel, metal binding protein; HET: PEP; 1.75A {Escherichia coli} SCOP: c.1.10.4 PDB: 1gg1_A 1kfl_A* 1qr7_A*
Probab=24.78 E-value=92 Score=25.83 Aligned_cols=29 Identities=17% Similarity=0.182 Sum_probs=22.0
Q ss_pred cccChhHHHHHHHHhCCE--EEEeccccccc
Q 048438 19 AVDPLKPLCDVAKQFGIW--VHVDAAYAGSA 47 (239)
Q Consensus 19 ~i~pl~~i~~i~~~~gi~--lhvD~A~~~~~ 47 (239)
...++.++.++.++.++. ++||.+|+.+.
T Consensus 242 ~~~di~~~~~~l~~~~lp~~VivD~SH~ns~ 272 (350)
T 1n8f_A 242 SAKHVAEVKEGLNKAGLPAQVMIDFSHANSS 272 (350)
T ss_dssp SHHHHHHHHHHHHHTTCCCCEEEECSGGGTT
T ss_pred CHHHHHHHHHHHHHcCCCCeEEEECCCcccC
Confidence 345567777666778999 99999998653
No 317
>1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A*
Probab=24.71 E-value=47 Score=26.34 Aligned_cols=22 Identities=9% Similarity=0.125 Sum_probs=19.1
Q ss_pred ccChhHHHHHHHHhCCEEEEec
Q 048438 20 VDPLKPLCDVAKQFGIWVHVDA 41 (239)
Q Consensus 20 i~pl~~i~~i~~~~gi~lhvD~ 41 (239)
.+.++++.+.|+++|+.+++|-
T Consensus 64 ~~~ld~~v~~a~~~Gi~Vild~ 85 (302)
T 1bqc_A 64 PSDVANVISLCKQNRLICMLEV 85 (302)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEEe
Confidence 3457899999999999999995
No 318
>1g01_A Endoglucanase; alpha/beta barrel, TIM barrel, hydrolase; 1.90A {Bacillus SP} SCOP: c.1.8.3 PDB: 1g0c_A*
Probab=24.38 E-value=47 Score=27.32 Aligned_cols=24 Identities=21% Similarity=0.142 Sum_probs=20.1
Q ss_pred ccChhHHHHHHHHhCCEEEEeccc
Q 048438 20 VDPLKPLCDVAKQFGIWVHVDAAY 43 (239)
Q Consensus 20 i~pl~~i~~i~~~~gi~lhvD~A~ 43 (239)
++-++++.+.|+++|+.+++|--+
T Consensus 89 l~~ld~~v~~a~~~Gi~VIld~H~ 112 (364)
T 1g01_A 89 KDLVYEGIELAFEHDMYVIVDWHV 112 (364)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEEecc
Confidence 345788999999999999999754
No 319
>4h6q_A Proline dehydrogenase; BETA8-alpha8-barrel, flavoenzyme, oxidoreductase; HET: FAD; 1.36A {Deinococcus radiodurans} PDB: 4h6r_A*
Probab=23.53 E-value=50 Score=26.94 Aligned_cols=24 Identities=17% Similarity=0.336 Sum_probs=20.4
Q ss_pred ccChhHHHHHHHHhCCEEEEeccc
Q 048438 20 VDPLKPLCDVAKQFGIWVHVDAAY 43 (239)
Q Consensus 20 i~pl~~i~~i~~~~gi~lhvD~A~ 43 (239)
.+.+.+|++.|+++|+.+.||+=+
T Consensus 117 ~~~l~~i~~~A~~~~v~v~iDaEe 140 (312)
T 4h6q_A 117 LTNARRIIAKAKEYGGFICLDMED 140 (312)
T ss_dssp HHHHHHHHHHHHHTTCEEEECCCS
T ss_pred HHHHHHHHHHHHHcCCEEEEccCc
Confidence 455888999999999999999954
No 320
>1egz_A Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CLAN GH-A, family 5-2, cellulase; 2.30A {Erwinia chrysanthemi} SCOP: c.1.8.3
Probab=23.39 E-value=52 Score=25.89 Aligned_cols=23 Identities=9% Similarity=0.104 Sum_probs=19.4
Q ss_pred cccChhHHHHHHHHhCCEEEEec
Q 048438 19 AVDPLKPLCDVAKQFGIWVHVDA 41 (239)
Q Consensus 19 ~i~pl~~i~~i~~~~gi~lhvD~ 41 (239)
.++.++++.+.|+++|+.+++|-
T Consensus 75 ~~~~ld~~v~~a~~~Gi~vild~ 97 (291)
T 1egz_A 75 NKAKVERVVDAAIANDMYAIIGW 97 (291)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHHHCCCEEEEEc
Confidence 34556789999999999999996
No 321
>1mf7_A Integrin alpha M; cell adhesion; 1.25A {Homo sapiens} SCOP: c.62.1.1 PDB: 1na5_A 1jlm_A 1ido_A 1m1u_A 3q3g_G 1n9z_A 1bhq_1 1bho_1 1idn_1 3qa3_G
Probab=22.97 E-value=1e+02 Score=22.25 Aligned_cols=37 Identities=14% Similarity=0.032 Sum_probs=24.5
Q ss_pred ccEEEEEecCCCCcccccChhHHHHHHHHhCCEEEEec
Q 048438 4 IPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDA 41 (239)
Q Consensus 4 ~p~~vv~t~gtt~~G~i~pl~~i~~i~~~~gi~lhvD~ 41 (239)
..++|++|-|... |...++.+.++.+++.|+.+++=|
T Consensus 107 ~~~iillTDG~~~-~d~~~~~~~~~~~~~~gi~v~~ig 143 (194)
T 1mf7_A 107 FKILVVITDGEKF-GDPLGYEDVIPEADREGVIRYVIG 143 (194)
T ss_dssp EEEEEEEESSCCB-SCSSCGGGTHHHHHHTTEEEEEEE
T ss_pred CeEEEEEcCCCCC-CCchhhHHHHHHHHHCCCEEEEEE
Confidence 3568888888765 322345677777888888776443
No 322
>4hty_A Cellulase; (alpha/beta)8 barrel, family 5 endoglucanase, hydrolase; 2.00A {Uncultured bacterium} PDB: 4hu0_A*
Probab=22.89 E-value=53 Score=26.99 Aligned_cols=23 Identities=17% Similarity=0.352 Sum_probs=19.6
Q ss_pred ccChhHHHHHHHHhCCEEEEecc
Q 048438 20 VDPLKPLCDVAKQFGIWVHVDAA 42 (239)
Q Consensus 20 i~pl~~i~~i~~~~gi~lhvD~A 42 (239)
++.++++.+.|+++|+.+++|--
T Consensus 120 l~~ld~~v~~a~~~Gi~Vild~H 142 (359)
T 4hty_A 120 LELLDQVVAWNNELGIYTILDWH 142 (359)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEEcC
Confidence 45568999999999999999953
No 323
>3faw_A Reticulocyte binding protein; TIM barrel, beta barrel, hydrolase, cell WALL, peptidoglycan-anchor, secreted; 2.10A {Streptococcus agalactiae COH1} PDB: 3fax_A*
Probab=22.78 E-value=47 Score=31.26 Aligned_cols=24 Identities=29% Similarity=0.398 Sum_probs=22.0
Q ss_pred ccChhHHHHHHHHhCCEEEEeccc
Q 048438 20 VDPLKPLCDVAKQFGIWVHVDAAY 43 (239)
Q Consensus 20 i~pl~~i~~i~~~~gi~lhvD~A~ 43 (239)
+++++++++-||++||.+++|-+.
T Consensus 369 ~~efk~lV~~~H~~GI~VILDvV~ 392 (877)
T 3faw_A 369 IAELKQLIHDIHKRGMGVILDVVY 392 (877)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECT
T ss_pred HHHHHHHHHHHHHcCCEEEEEEee
Confidence 788999999999999999999873
No 324
>2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A
Probab=22.77 E-value=45 Score=26.40 Aligned_cols=25 Identities=16% Similarity=0.312 Sum_probs=20.8
Q ss_pred ccccChhHHHHHHHHhCCEEEEecc
Q 048438 18 TAVDPLKPLCDVAKQFGIWVHVDAA 42 (239)
Q Consensus 18 G~i~pl~~i~~i~~~~gi~lhvD~A 42 (239)
...+.++++.+.|+++|+.+++|--
T Consensus 61 ~~~~~ld~~v~~a~~~Gi~Vild~H 85 (294)
T 2whl_A 61 DDIDTIREVIELAEQNKMVAVVEVH 85 (294)
T ss_dssp CCHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred cHHHHHHHHHHHHHHCCCEEEEEec
Confidence 3455678999999999999999963
No 325
>3jug_A Beta-mannanase; TIM-barrel, glycosidase, hydrolase; 1.60A {Bacillus}
Probab=21.45 E-value=49 Score=27.28 Aligned_cols=25 Identities=16% Similarity=0.262 Sum_probs=21.1
Q ss_pred cccChhHHHHHHHHhCCEEEEeccc
Q 048438 19 AVDPLKPLCDVAKQFGIWVHVDAAY 43 (239)
Q Consensus 19 ~i~pl~~i~~i~~~~gi~lhvD~A~ 43 (239)
.++.++++.+.|+++|+++++|--.
T Consensus 85 ~l~~ld~~v~~a~~~GiyVIlDlH~ 109 (345)
T 3jug_A 85 DIDTVREVIELAEQNKMVAVVEVHD 109 (345)
T ss_dssp CHHHHHHHHHHHHTTTCEEEEEECT
T ss_pred HHHHHHHHHHHHHHCCCEEEEEecc
Confidence 4566789999999999999999744
No 326
>3n9k_A Glucan 1,3-beta-glucosidase; aromatic entranceway/clamp, exoglucanase, glycoside hydrolas protein-carbohydrate interaction; HET: BGC; 1.70A {Candida albicans} SCOP: c.1.8.3 PDB: 2pc8_A* 2pb1_A* 2pbo_A 3o6a_A 2pf0_A 1cz1_A 1eqc_A* 1eqp_A
Probab=21.35 E-value=42 Score=28.35 Aligned_cols=24 Identities=25% Similarity=0.208 Sum_probs=21.5
Q ss_pred ccccChhHHHHHHHHhCCEEEEec
Q 048438 18 TAVDPLKPLCDVAKQFGIWVHVDA 41 (239)
Q Consensus 18 G~i~pl~~i~~i~~~~gi~lhvD~ 41 (239)
|..+-|+++.+.|+++|+.++||=
T Consensus 110 ~~~~~ld~vV~~a~~~Gl~VILDl 133 (399)
T 3n9k_A 110 GQVQYLEKALGWARKNNIRVWIDL 133 (399)
T ss_dssp CHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred hHHHHHHHHHHHHHHCCCEEEEEe
Confidence 567779999999999999999995
No 327
>3t7y_A YOP proteins translocation protein U; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta; 2.10A {Chlamydia trachomatis} SCOP: d.367.1.0
Probab=21.16 E-value=59 Score=21.52 Aligned_cols=19 Identities=16% Similarity=0.336 Sum_probs=16.7
Q ss_pred hHHHHHHHHhCCEEEEecc
Q 048438 24 KPLCDVAKQFGIWVHVDAA 42 (239)
Q Consensus 24 ~~i~~i~~~~gi~lhvD~A 42 (239)
.+|.++|+++|+.++=|-.
T Consensus 45 ~~I~~~A~e~gVPi~e~~~ 63 (97)
T 3t7y_A 45 KRIIAEAEKYGVPIMRNVP 63 (97)
T ss_dssp HHHHHHHHHHTCCEEECHH
T ss_pred HHHHHHHHHcCCeEEECHH
Confidence 6799999999999998873
No 328
>1h4p_A Glucan 1,3-beta-glucosidase I/II; hydrolase, glucan degradation, hydrolyase, glycosidase; HET: NAG BMA MAN NDG; 1.75A {Saccharomyces cerevisiae} SCOP: c.1.8.3
Probab=20.90 E-value=61 Score=27.32 Aligned_cols=25 Identities=20% Similarity=0.028 Sum_probs=21.6
Q ss_pred cccChhHHHHHHHHhCCEEEEeccc
Q 048438 19 AVDPLKPLCDVAKQFGIWVHVDAAY 43 (239)
Q Consensus 19 ~i~pl~~i~~i~~~~gi~lhvD~A~ 43 (239)
.++-|+++.+.|+++|+.++||=-+
T Consensus 112 ~l~~ld~vv~~a~~~Gi~VilDlH~ 136 (408)
T 1h4p_A 112 QESYLDQAIGWARNNSLKVWVDLHG 136 (408)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred HHHHHHHHHHHHHHCCCEEEEECCC
Confidence 5677899999999999999999643
No 329
>2osx_A Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel, hydrolase; HET: SIA GAL BGC 16C; 1.10A {Rhodococcus SP} PDB: 2oyk_A* 2osw_A* 2oyl_A* 2oym_A* 2osy_A*
Probab=20.86 E-value=43 Score=28.82 Aligned_cols=23 Identities=17% Similarity=0.127 Sum_probs=19.5
Q ss_pred ccChhHHHHHHHHhCCEEEEecc
Q 048438 20 VDPLKPLCDVAKQFGIWVHVDAA 42 (239)
Q Consensus 20 i~pl~~i~~i~~~~gi~lhvD~A 42 (239)
++.++++.+.|+++|+.+++|--
T Consensus 104 l~~l~~~v~~a~~~Gi~vildlH 126 (481)
T 2osx_A 104 LDRVEDRVGWYAERGYKVMLDMH 126 (481)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEEcc
Confidence 45678899999999999999953
No 330
>2p0o_A Hypothetical protein DUF871; structural genomics, TIM barrel, PF05 2, protein structure initiative, midwest center for structu genomics; 2.15A {Enterococcus faecalis}
Probab=20.45 E-value=87 Score=26.20 Aligned_cols=27 Identities=22% Similarity=0.105 Sum_probs=23.0
Q ss_pred ccccChhHHHHHHHHhCCEEEEecccc
Q 048438 18 TAVDPLKPLCDVAKQFGIWVHVDAAYA 44 (239)
Q Consensus 18 G~i~pl~~i~~i~~~~gi~lhvD~A~~ 44 (239)
-....+++|.++|+++|+-+++|=+-.
T Consensus 47 ~~~~~~~~l~~~a~~~g~~vi~DIsp~ 73 (372)
T 2p0o_A 47 LYRQRLTDLGAIAKAEKMKIMVDISGE 73 (372)
T ss_dssp CHHHHHHHHHHHHHHHTCEEEEEECHH
T ss_pred HHHHHHHHHHHHHHHCCCEEEEECCHH
Confidence 446779999999999999999998643
No 331
>1vjz_A Endoglucanase; TM1752, structural genomics, JCSG, PSI, prote structure initiative, joint center for structural genomics; 2.05A {Thermotoga maritima} SCOP: c.1.8.3
Probab=20.42 E-value=57 Score=26.37 Aligned_cols=26 Identities=8% Similarity=0.202 Sum_probs=21.4
Q ss_pred ccccChhHHHHHHHHhCCEEEEeccc
Q 048438 18 TAVDPLKPLCDVAKQFGIWVHVDAAY 43 (239)
Q Consensus 18 G~i~pl~~i~~i~~~~gi~lhvD~A~ 43 (239)
+.++-++++.+.|+++|+.+++|=-+
T Consensus 74 ~~~~~ld~~v~~a~~~Gi~vildlh~ 99 (341)
T 1vjz_A 74 DFFEKIDRVIFWGEKYGIHICISLHR 99 (341)
T ss_dssp GGHHHHHHHHHHHHHHTCEEEEEEEE
T ss_pred HHHHHHHHHHHHHHHcCCEEEEEecC
Confidence 34555789999999999999999744
No 332
>2cks_A Endoglucanase E-5; carbohydrate metabolism, polysaccharide degradation, glycoside hydrolase family 5, hydrolase, glycosidase; HET: BEN; 1.6A {Thermobifida fusca} PDB: 2ckr_A*
Probab=20.36 E-value=54 Score=26.13 Aligned_cols=23 Identities=35% Similarity=0.468 Sum_probs=19.6
Q ss_pred cccChhHHHHHHHHhCCEEEEec
Q 048438 19 AVDPLKPLCDVAKQFGIWVHVDA 41 (239)
Q Consensus 19 ~i~pl~~i~~i~~~~gi~lhvD~ 41 (239)
.++-++++.+.|+++|+.+++|-
T Consensus 78 ~l~~ld~~v~~a~~~Gl~vild~ 100 (306)
T 2cks_A 78 FTDRMHQLIDMATARGLYVIVDW 100 (306)
T ss_dssp HHHHHHHHHHHHHTTTCEEEEEE
T ss_pred HHHHHHHHHHHHHHCCCEEEEEe
Confidence 34567888999999999999996
No 333
>3n2n_F Anthrax toxin receptor 1; rossmann fold; 1.80A {Homo sapiens} SCOP: c.62.1.1
Probab=20.10 E-value=63 Score=23.12 Aligned_cols=38 Identities=11% Similarity=0.019 Sum_probs=24.5
Q ss_pred ccEEEEEecCCCCcccccChhHHHHHHHHhCCEEEEec
Q 048438 4 IPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDA 41 (239)
Q Consensus 4 ~p~~vv~t~gtt~~G~i~pl~~i~~i~~~~gi~lhvD~ 41 (239)
...+|++|-|....+...+..+.++.+++.|+.+++=|
T Consensus 107 ~~~iillTDG~~~~~~~~~~~~~~~~~~~~gi~i~~ig 144 (185)
T 3n2n_F 107 ASVIIALTDGELHEDLFFYSEREANRSRDLGAIVYAVG 144 (185)
T ss_dssp EEEEEEEECCCCCHHHHHHHHHHHHHHHHTTEEEEEEE
T ss_pred CcEEEEEcCCCCCCCcccchHHHHHHHHHCCCEEEEEE
Confidence 35677788887655544444667777777777665543
Done!