BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>048445
MSGVWVFDKNGVARLIQNPTKESFERKEPVQPGTATAPGARPRVLVFLPTNQVIRSYAEL
EQRLTELGWSRYHDNSSSSNRLLQFHKSEDSAHLISLPTNFANFRSIHMYDIVVKNRSFF
EVRDLIMSPPTAENGRCE

High Scoring Gene Products

Symbol, full name Information P value
FLP1
AT4G31380
protein from Arabidopsis thaliana 4.5e-27
RAA1
Flowering-promoting factor 1-like protein 1
protein from Oryza sativa Japonica Group 2.6e-24
FPF1
AT5G24860
protein from Arabidopsis thaliana 1.1e-23
AT5G10625 protein from Arabidopsis thaliana 2.3e-23

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  048445
        (138 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2128206 - symbol:FLP1 "AT4G31380" species:3702...   304  4.5e-27   1
UNIPROTKB|Q9LGE3 - symbol:RAA1 "Flowering-promoting facto...   278  2.6e-24   1
TAIR|locus:2149368 - symbol:FPF1 "AT5G24860" species:3702...   272  1.1e-23   1
TAIR|locus:1006230424 - symbol:AT5G10625 "AT5G10625" spec...   269  2.3e-23   1


>TAIR|locus:2128206 [details] [associations]
            symbol:FLP1 "AT4G31380" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] EMBL:CP002687 EMBL:AL161578
            EMBL:AL080283 EMBL:AL021633 EMBL:AY800638 EMBL:AY924826
            IPI:IPI00535950 PIR:T04505 RefSeq:NP_194866.2 UniGene:At.51243
            UniGene:At.73260 STRING:Q5Q0B3 EnsemblPlants:AT4G31380.1
            GeneID:829265 KEGG:ath:AT4G31380 TAIR:At4g31380
            HOGENOM:HOG000237732 InParanoid:Q5Q0B3 ProtClustDB:CLSN2686510
            Genevestigator:Q5Q0B3 Uniprot:Q5Q0B3
        Length = 124

 Score = 304 (112.1 bits), Expect = 4.5e-27, P = 4.5e-27
 Identities = 63/126 (50%), Positives = 84/126 (66%)

Query:     1 MSGVWVFDKNGVARLIQNPTKESF-ERKEPVQPGTATAPGARPRVLVFLPTNQVIRSYAE 59
             MSGVWVF+KNGV RL++NP  +S  +  E    G       R ++LV LP+++V+ SY  
Sbjct:     1 MSGVWVFNKNGVMRLVENPYNQSAGDSSESSSSGGNQQQRMRRKILVHLPSSEVVSSYGS 60

Query:    60 LEQRLTELGWSRYHDNSSSSNRLLQFHKSEDSAHLISLPTNFANFRSIHMYDIVVKNRSF 119
             LE+ L  LGW RY+ +  +++ LLQFHK   S  LISLP +F+ F SIHMYDIVVKN + 
Sbjct:    61 LEKILKNLGWERYY-SGDNTDHLLQFHK-RTSIDLISLPRDFSKFNSIHMYDIVVKNPNV 118

Query:   120 FEVRDL 125
             F VRD+
Sbjct:   119 FHVRDM 124


>UNIPROTKB|Q9LGE3 [details] [associations]
            symbol:RAA1 "Flowering-promoting factor 1-like protein 1"
            species:39947 "Oryza sativa Japonica Group" [GO:0005515 "protein
            binding" evidence=IPI] [GO:0005525 "GTP binding" evidence=IDA]
            [GO:0009733 "response to auxin stimulus" evidence=IDA] [GO:0045841
            "negative regulation of mitotic metaphase/anaphase transition"
            evidence=IDA] [GO:2000280 "regulation of root development"
            evidence=IMP] [GO:0072686 "mitotic spindle" evidence=IDA]
            GO:GO:0005525 GO:GO:0005634 GO:GO:0005737 GO:GO:0009733
            GO:GO:0009739 GO:GO:0009911 EMBL:AP008207 EMBL:CM000138
            GO:GO:2000280 ProtClustDB:CLSN2686510 EMBL:AY659938 EMBL:AP002525
            EMBL:AK070626 RefSeq:NP_001042631.1 UniGene:Os.487 IntAct:Q9LGE3
            STRING:Q9LGE3 EnsemblPlants:LOC_Os01g15340.1 GeneID:4326229
            KEGG:osa:4326229 Gramene:Q9LGE3 eggNOG:NOG330412 OMA:GWERYFG
            GO:GO:0045841 Uniprot:Q9LGE3
        Length = 109

 Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
 Identities = 66/124 (53%), Positives = 78/124 (62%)

Query:     1 MSGVWVFDKNGVARLIQNPTKESFERKEPVQPGTATAPGARPRVLVFLPTNQVIRSYAEL 60
             MSGVWVF KNGV RL++         K+    GTA A G R + LV  P+ QV+ SYA L
Sbjct:     1 MSGVWVF-KNGVVRLVE---------KQQATAGTAVA-GGRRKALVHTPSGQVVSSYAAL 49

Query:    61 EQRLTELGWSRYHDNSSSSNRLLQFHKSEDSAHLISLPTNFANFRSIHMYDIVVKNRSFF 120
             E RLT LGW RY+++ S    L QFHK   S  LISLP +F+ F S+HMYDIVVKNR  F
Sbjct:    50 EARLTALGWERYYEDPS----LFQFHK-RGSLDLISLPADFSAFSSVHMYDIVVKNRDSF 104

Query:   121 EVRD 124
              V D
Sbjct:   105 RVVD 108


>TAIR|locus:2149368 [details] [associations]
            symbol:FPF1 "AT5G24860" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0009739 "response to gibberellin
            stimulus" evidence=IGI] [GO:0009911 "positive regulation of flower
            development" evidence=IMP] [GO:0010228 "vegetative to reproductive
            phase transition of meristem" evidence=IMP] EMBL:CP002688
            GenomeReviews:BA000015_GR GO:GO:0009739 EMBL:AL392145 GO:GO:0009911
            GO:GO:0010228 EMBL:AF069716 HOGENOM:HOG000237732
            ProtClustDB:CLSN2686510 OMA:GWERYFG EMBL:BT025027 EMBL:Y11988
            IPI:IPI00534946 RefSeq:NP_197868.1 UniGene:At.59 IntAct:O23624
            PRIDE:O23624 EnsemblPlants:AT5G24860.1 GeneID:832555
            KEGG:ath:AT5G24860 TAIR:At5g24860 eggNOG:NOG266474
            InParanoid:O23624 PhylomeDB:O23624 Genevestigator:O23624
            Uniprot:O23624
        Length = 110

 Score = 272 (100.8 bits), Expect = 1.1e-23, P = 1.1e-23
 Identities = 63/124 (50%), Positives = 78/124 (62%)

Query:     1 MSGVWVFDKNGVARLIQNPTKESFERKEPVQPGTATAPGARPRVLVFLPTNQVIRSYAEL 60
             MSGVWVF KNGV RL++NP           Q G+ T    R +V+V+LPT +V+ SY+ L
Sbjct:     1 MSGVWVF-KNGVIRLVENPN----------QSGSDTQN--RRKVMVYLPTGEVVSSYSTL 47

Query:    61 EQRLTELGWSRYHDNSSSSNRLLQFHKSEDSAHLISLPTNFANFRSIHMYDIVVKNRSFF 120
             EQ L  LGW RY     +   LLQFHK   S  LISLP +F  F S++MYDIVVKN ++F
Sbjct:    48 EQILQSLGWERYFGGGDTD--LLQFHK-RSSIDLISLPRDFTKFNSVYMYDIVVKNPNYF 104

Query:   121 EVRD 124
              VRD
Sbjct:   105 HVRD 108


>TAIR|locus:1006230424 [details] [associations]
            symbol:AT5G10625 "AT5G10625" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002688 EMBL:AL353995 HOGENOM:HOG000237732
            ProtClustDB:CLSN2686510 EMBL:AY065245 EMBL:BT014861 IPI:IPI00543622
            PIR:T49976 RefSeq:NP_974763.1 UniGene:At.28549 PRIDE:Q9LXB5
            EnsemblPlants:AT5G10625.1 GeneID:2745983 KEGG:ath:AT5G10625
            TAIR:At5g10625 eggNOG:NOG320385 InParanoid:Q9LXB5 OMA:FQFHKQS
            PhylomeDB:Q9LXB5 Genevestigator:Q9LXB5 Uniprot:Q9LXB5
        Length = 112

 Score = 269 (99.8 bits), Expect = 2.3e-23, P = 2.3e-23
 Identities = 60/124 (48%), Positives = 76/124 (61%)

Query:     1 MSGVWVFDKNGVARLIQNPTKESFERKEPVQPGTATAPGARPRVLVFLPTNQVIRSYAEL 60
             MSGVWVF+ NGV RL++NP +           G +T    R  VLV+LPT + + SY+ L
Sbjct:     1 MSGVWVFN-NGVIRLVENPNQSG---------GVSTQSHGRRNVLVYLPTGEAVSSYSSL 50

Query:    61 EQRLTELGWSRYHDNSSSSNRLLQFHKSEDSAHLISLPTNFANFRSIHMYDIVVKNRSFF 120
             EQ L  LGW RY    S    L+Q+HK   S  LISLP +F+ F S++MYDIVVKN + F
Sbjct:    51 EQILRSLGWERYFSGDSD---LIQYHK-RSSIDLISLPRDFSKFNSVYMYDIVVKNPNSF 106

Query:   121 EVRD 124
              VRD
Sbjct:   107 HVRD 110


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.318   0.132   0.394    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      138       138   0.00091  102 3  11 22  0.43    31
                                                     30  0.45    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  577 (61 KB)
  Total size of DFA:  137 KB (2086 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  15.57u 0.12s 15.69t   Elapsed:  00:00:01
  Total cpu time:  15.57u 0.12s 15.69t   Elapsed:  00:00:01
  Start:  Mon May 20 23:11:32 2013   End:  Mon May 20 23:11:33 2013

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