Query 048449
Match_columns 288
No_of_seqs 111 out of 125
Neff 4.9
Searched_HMMs 13730
Date Mon Mar 25 16:43:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048449.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/048449hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1omza_ c.68.1.15 (A:) Alpha-1 50.9 2.4 0.00018 31.9 1.3 25 2-26 73-97 (265)
2 d1xhba2 c.68.1.17 (A:95-422) P 35.2 2.3 0.00017 35.5 -1.4 25 2-26 99-123 (328)
3 d2ezia_ a.4.1.2 (A:) Transposa 25.3 34 0.0025 23.2 3.8 35 200-234 8-42 (75)
4 d1qg8a_ c.68.1.1 (A:) Spore co 17.4 14 0.001 28.8 0.3 24 2-25 80-103 (255)
5 d2acva1 c.87.1.10 (A:3-463) Tr 16.8 2.1E+02 0.015 22.9 7.9 63 159-237 382-444 (461)
6 d1lmra_ g.3.6.3 (A:) ADO1 {Ass 16.3 29 0.0021 20.5 1.5 11 17-27 1-11 (35)
7 d1w2ya_ a.204.1.1 (A:) Type II 13.4 76 0.0055 25.9 3.9 45 150-209 163-210 (229)
8 d1pzta_ c.68.1.2 (A:) beta 1,4 12.1 19 0.0014 30.6 -0.4 25 2-26 101-129 (271)
9 d1fcda3 d.87.1.1 (A:328-401) F 10.9 29 0.0021 24.0 0.3 19 116-134 41-59 (74)
10 d2vcha1 c.87.1.10 (A:6-476) Hy 10.5 1.7E+02 0.012 23.6 5.3 62 159-237 386-447 (471)
No 1
>d1omza_ c.68.1.15 (A:) Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=50.89 E-value=2.4 Score=31.86 Aligned_cols=25 Identities=8% Similarity=0.018 Sum_probs=21.6
Q ss_pred ccceeecccceEEEeccCCccccCC
Q 048449 2 QFFAFFADLFLFILTLVNGEKVAKD 26 (288)
Q Consensus 2 ~n~GYL~Aga~~I~~~DDDn~p~~~ 26 (288)
||.|.-.|..|||..+|||..+..+
T Consensus 73 ~n~~~~~a~ge~i~~lD~D~~~~~~ 97 (265)
T d1omza_ 73 RLQVFPEVETNAVLMVDDDTLISAQ 97 (265)
T ss_dssp GGSCCTTCCSSEEEEECTTEEECHH
T ss_pred hhhhHHhCCcCEEEEeCcccCCCHH
Confidence 6778888889999999999998773
No 2
>d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=35.19 E-value=2.3 Score=35.53 Aligned_cols=25 Identities=8% Similarity=-0.181 Sum_probs=21.4
Q ss_pred ccceeecccceEEEeccCCccccCC
Q 048449 2 QFFAFFADLFLFILTLVNGEKVAKD 26 (288)
Q Consensus 2 ~n~GYL~Aga~~I~~~DDDn~p~~~ 26 (288)
||.|.-.|..|||..+|+|+.+..+
T Consensus 99 ~N~Gi~~a~gd~i~flD~D~~~~p~ 123 (328)
T d1xhba2 99 RLKGAAVSRGQVITFLDAHCECTAG 123 (328)
T ss_dssp HHHHHHHCCSSEEEEEESSEEECTT
T ss_pred HHHHHHhhhcceeeecCcccccChh
Confidence 5677777789999999999999875
No 3
>d2ezia_ a.4.1.2 (A:) Transposase {Bacteriophage mu [TaxId: 10677]}
Probab=25.33 E-value=34 Score=23.17 Aligned_cols=35 Identities=26% Similarity=0.457 Sum_probs=29.9
Q ss_pred cchhHHHHhhhccCCCCCCCHHHHHHHHHHHHHHH
Q 048449 200 WQEEIIPFFQSVLLPKECTTVQKCYIELSRQVKEK 234 (288)
Q Consensus 200 ~~e~ii~fl~~~~l~~~~~t~~~cy~eLa~~v~~~ 234 (288)
.++++|++|++-=|.....++..||.++...-+++
T Consensus 8 ~~~~~we~i~~~YL~~~~ps~~~~y~~i~~~c~~~ 42 (75)
T d2ezia_ 8 FDEDAWQFLIADYLRPEKPAFRKCYERLELAAREH 42 (75)
T ss_dssp SCHHHHHHHHHHHTSTTCCCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCccCCCHHHHHHHHHHHHHHc
Confidence 37799999999766678999999999999987666
No 4
>d1qg8a_ c.68.1.1 (A:) Spore coat polysaccharide biosynthesis protein SpsA {Bacillus subtilis [TaxId: 1423]}
Probab=17.37 E-value=14 Score=28.85 Aligned_cols=24 Identities=8% Similarity=-0.226 Sum_probs=19.3
Q ss_pred ccceeecccceEEEeccCCccccC
Q 048449 2 QFFAFFADLFLFILTLVNGEKVAK 25 (288)
Q Consensus 2 ~n~GYL~Aga~~I~~~DDDn~p~~ 25 (288)
+|.|.-.|..+||+.+|+|+.+..
T Consensus 80 ~N~gi~~a~g~~i~~lD~Dd~~~p 103 (255)
T d1qg8a_ 80 INQAIEMAEGEYITYATDDNIYMP 103 (255)
T ss_dssp HHHHHHHCCCSEEEEEETTEEECT
T ss_pred cccccccccccccccccccccccc
Confidence 455566667899999999999876
No 5
>d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase UGT71G1 {Medicago truncatula [TaxId: 3880]}
Probab=16.77 E-value=2.1e+02 Score=22.88 Aligned_cols=63 Identities=14% Similarity=0.163 Sum_probs=38.1
Q ss_pred HHHHHHHHHhCCceEeecCceeeeccCCCccchHhhhhhhhcchhHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHcCC
Q 048449 159 WCAKVICDHLSLGVKTGLPYIWHSKASNPFVNLKKEYKGIYWQEEIIPFFQSVLLPKECTTVQKCYIELSRQVKEKLGP 237 (288)
Q Consensus 159 y~~Qri~~~lG~~V~fg~P~v~h~r~h~~~~Dl~~E~~g~~~~e~ii~fl~~~~l~~~~~t~~~cy~eLa~~v~~~l~~ 237 (288)
++++||.+.+|.+|..-.+. +..... .-.|+|.+-++++- .+...+.+...+|.+.+++.+++
T Consensus 382 ~nA~rlve~~G~G~~l~~~~----~~~~~~----------~t~~~l~~a~~~vl--~~d~~~r~~a~~l~~~~r~a~~~ 444 (461)
T d2acva1 382 LNAFRLVKEWGVGLGLRVDY----RKGSDV----------VAAEEIEKGLKDLM--DKDSIVHKKVQEMKEMSRNAVVD 444 (461)
T ss_dssp HHHHHHHHTSCCEEESCSSC----CTTCCC----------CCHHHHHHHHHHHT--CTTCTHHHHHHHHHHHHHHHTST
T ss_pred HHHHHHHHHhCceEEeeccc----cccCCc----------cCHHHHHHHHHHHh--hCCHHHHHHHHHHHHHHHHHhcC
Confidence 78999999999988742111 111111 11234555555444 23456889999999888776554
No 6
>d1lmra_ g.3.6.3 (A:) ADO1 {Assassin bug (Agriosphodrus dohrni) [TaxId: 184613]}
Probab=16.29 E-value=29 Score=20.51 Aligned_cols=11 Identities=0% Similarity=-0.315 Sum_probs=9.1
Q ss_pred ccCCccccCCC
Q 048449 17 LVNGEKVAKDP 27 (288)
Q Consensus 17 ~DDDn~p~~~~ 27 (288)
.||||+|.+..
T Consensus 1 ad~dclprgsk 11 (35)
T d1lmra_ 1 ADDDCLPRGSK 11 (35)
T ss_dssp CCSCCCCTTCC
T ss_pred Ccccccccccc
Confidence 48999999863
No 7
>d1w2ya_ a.204.1.1 (A:) Type II deoxyuridine triphosphatase {Campylobacter jejuni [TaxId: 197]}
Probab=13.38 E-value=76 Score=25.89 Aligned_cols=45 Identities=9% Similarity=0.115 Sum_probs=32.2
Q ss_pred CccchhHHHHHHHHHHHHhCCceEeecCceeee---ccCCCccchHhhhhhhhcchhHHHHhh
Q 048449 150 GRYDDMWAGWCAKVICDHLSLGVKTGLPYIWHS---KASNPFVNLKKEYKGIYWQEEIIPFFQ 209 (288)
Q Consensus 150 ~R~~DIWrGy~~Qri~~~lG~~V~fg~P~v~h~---r~h~~~~Dl~~E~~g~~~~e~ii~fl~ 209 (288)
+-+++|-+.|..|-.+=+- .|. |..+|.+ .+.|.|+|++|++.|.
T Consensus 163 ~s~del~~aYv~KN~lN~~-----------RQd~GYk~G~Y~K----~w~g~EDN~~l~~il~ 210 (229)
T d1w2ya_ 163 LNLEILYKTYIGKNVLNIF-----------RQNNGYKDGSYKK----TWNGKEDNEVLAQILE 210 (229)
T ss_dssp CCHHHHHHHHHHHHHHHHH-----------HHHTTTTTTCCCS----EETTEEHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHhhHhHH-----------HHHcCCcccceee----ccCCcchHHHHHHHHh
Confidence 5578999999999765432 111 1145554 4999999999999994
No 8
>d1pzta_ c.68.1.2 (A:) beta 1,4 galactosyltransferase (b4GalT1) {Cow (Bos taurus) [TaxId: 9913]}
Probab=12.09 E-value=19 Score=30.60 Aligned_cols=25 Identities=8% Similarity=-0.154 Sum_probs=21.9
Q ss_pred ccceeecc----cceEEEeccCCccccCC
Q 048449 2 QFFAFFAD----LFLFILTLVNGEKVAKD 26 (288)
Q Consensus 2 ~n~GYL~A----ga~~I~~~DDDn~p~~~ 26 (288)
-|+||+.| .++++++-|-|..|.++
T Consensus 101 lNiGf~~a~~~~~~~~~ifHDVDllP~~~ 129 (271)
T d1pzta_ 101 LNVGFKEALKDYDYNCFVFSDVDLIPMND 129 (271)
T ss_dssp HHHHHHHHHHHSCCCEEEEECTTEEESBT
T ss_pred hhHHHHHhhhccCccEEEEecCCcCcccc
Confidence 58999999 47889999999999885
No 9
>d1fcda3 d.87.1.1 (A:328-401) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}
Probab=10.90 E-value=29 Score=24.00 Aligned_cols=19 Identities=21% Similarity=0.445 Sum_probs=10.8
Q ss_pred CCceeecccchhhhhhhhh
Q 048449 116 KGSLFPMCGMNLAFDRELI 134 (288)
Q Consensus 116 ~Gt~~P~nsqNtaF~rea~ 134 (288)
.|-.+|+++-+-.=.+|+.
T Consensus 41 sgg~Sp~~a~~~~r~~Ea~ 59 (74)
T d1fcda3 41 SGGVTPVDAPDWVLEREVQ 59 (74)
T ss_dssp CCEECCTTCCHHHHHHHHH
T ss_pred CCCcCCCCcCHHHHHHHHH
Confidence 3556777765554445554
No 10
>d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=10.48 E-value=1.7e+02 Score=23.56 Aligned_cols=62 Identities=13% Similarity=0.193 Sum_probs=35.0
Q ss_pred HHHHHHHHHhCCceEeecCceeeeccCCCccchHhhhhhhhcchhHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHcCC
Q 048449 159 WCAKVICDHLSLGVKTGLPYIWHSKASNPFVNLKKEYKGIYWQEEIIPFFQSVLLPKECTTVQKCYIELSRQVKEKLGP 237 (288)
Q Consensus 159 y~~Qri~~~lG~~V~fg~P~v~h~r~h~~~~Dl~~E~~g~~~~e~ii~fl~~~~l~~~~~t~~~cy~eLa~~v~~~l~~ 237 (288)
++++|+++.+|.+|.- ++..+. .+. .|+|.+-+.++--..++..+.+...+|.+.+++.+++
T Consensus 386 ~nA~rv~e~lG~Gv~l-------~~~~~~--~~t--------~~~l~~ai~~vl~~~~~~~~r~ra~~l~e~~~~a~~~ 447 (471)
T d2vcha1 386 MNAVLLSEDIRAALRP-------RAGDDG--LVR--------REEVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKD 447 (471)
T ss_dssp HHHHHHHHTTCCEECC-------CCCTTS--CCC--------HHHHHHHHHHHHTSTHHHHHHHHHHHHHHHHHHHTST
T ss_pred HHHHHHHHHheeEEEE-------ecCCCC--cCC--------HHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHhC
Confidence 6899999999888754 111100 111 1234444444431111235888888998888876554
Done!